##gff-version 3
#!gff-spec-version 1.21
#!processor NCBI annotwriter
#!genome-build ASM2794517v1
#!genome-build-accession NCBI_Assembly:GCF_027945175.1
#!annotation-date 01/24/2023 17:56:12
#!annotation-source NCBI RefSeq 
##sequence-region NZ_CP116044.1 1 4955913
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=562
NZ_CP116044.1	RefSeq	region	1	4955913	.	+	.	ID=NZ_CP116044.1:1..4955913;Dbxref=taxon:562;Is_circular=true;Name=ANONYMOUS;collected-by=China CDC;collection-date=2021;country=China: Beijing;gbkey=Src;genome=chromosome;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;strain=STEC1575
NZ_CP116044.1	RefSeq	gene	285	365	.	+	.	ID=gene-PHA55_RS00005;Name=PHA55_RS00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS00005;old_locus_tag=PHA55_00005
NZ_CP116044.1	Protein Homology	CDS	285	365	.	+	0	ID=cds-WP_120795392.1;Parent=gene-PHA55_RS00005;Dbxref=Genbank:WP_120795392.1;Name=WP_120795392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518826.1;locus_tag=PHA55_RS00005;product=protein YsdD;protein_id=WP_120795392.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	595	735	.	+	.	ID=gene-PHA55_RS00010;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=PHA55_RS00010;old_locus_tag=PHA55_00010
NZ_CP116044.1	Protein Homology	CDS	595	735	.	+	0	ID=cds-WP_000831330.1;Parent=gene-PHA55_RS00010;Dbxref=Genbank:WP_000831330.1;Name=WP_000831330.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=PHA55_RS00010;product=50S ribosomal protein L34;protein_id=WP_000831330.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	752	1111	.	+	.	ID=gene-PHA55_RS00015;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=PHA55_RS00015;old_locus_tag=PHA55_00015
NZ_CP116044.1	Protein Homology	CDS	752	1111	.	+	0	ID=cds-WP_000239730.1;Parent=gene-PHA55_RS00015;Dbxref=Genbank:WP_000239730.1;Name=WP_000239730.1;Ontology_term=GO:0006396,GO:0004526;gbkey=CDS;gene=rnpA;go_function=ribonuclease P activity|0004526||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=PHA55_RS00015;product=ribonuclease P protein component;protein_id=WP_000239730.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1075	1332	.	+	.	ID=gene-PHA55_RS00020;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=PHA55_RS00020;old_locus_tag=PHA55_00020
NZ_CP116044.1	Protein Homology	CDS	1075	1332	.	+	0	ID=cds-WP_001307474.1;Parent=gene-PHA55_RS00020;Dbxref=Genbank:WP_001307474.1;Name=WP_001307474.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=PHA55_RS00020;product=membrane protein insertion efficiency factor YidD;protein_id=WP_001307474.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1335	2981	.	+	.	ID=gene-PHA55_RS00025;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=PHA55_RS00025;old_locus_tag=PHA55_00025
NZ_CP116044.1	Protein Homology	CDS	1335	2981	.	+	0	ID=cds-WP_000378258.1;Parent=gene-PHA55_RS00025;Dbxref=Genbank:WP_000378258.1;Name=WP_000378258.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312667.1;locus_tag=PHA55_RS00025;product=membrane protein insertase YidC;protein_id=WP_000378258.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3087	4451	.	+	.	ID=gene-PHA55_RS00030;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=PHA55_RS00030;old_locus_tag=PHA55_00030
NZ_CP116044.1	Protein Homology	CDS	3087	4451	.	+	0	ID=cds-WP_001282361.1;Parent=gene-PHA55_RS00030;Dbxref=Genbank:WP_001282361.1;Name=WP_001282361.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418162.1;locus_tag=PHA55_RS00030;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_001282361.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4694	4768	.	+	.	ID=gene-PHA55_RS00035;Name=tnaC;gbkey=Gene;gene=tnaC;gene_biotype=protein_coding;locus_tag=PHA55_RS00035;old_locus_tag=PHA55_00035
NZ_CP116044.1	Protein Homology	CDS	4694	4768	.	+	0	ID=cds-WP_001364348.1;Parent=gene-PHA55_RS00035;Dbxref=Genbank:WP_001364348.1;Name=WP_001364348.1;Ontology_term=GO:0006569,GO:0031554,GO:0031556;gbkey=CDS;gene=tnaC;go_process=tryptophan catabolic process|0006569||IEA,regulation of termination of DNA-templated transcription|0031554||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312671.1;locus_tag=PHA55_RS00035;product=tryptophanase leader peptide;protein_id=WP_001364348.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4989	6404	.	+	.	ID=gene-PHA55_RS00040;Name=tnaA;gbkey=Gene;gene=tnaA;gene_biotype=protein_coding;locus_tag=PHA55_RS00040;old_locus_tag=PHA55_00040
NZ_CP116044.1	Protein Homology	CDS	4989	6404	.	+	0	ID=cds-WP_001295247.1;Parent=gene-PHA55_RS00040;Dbxref=Genbank:WP_001295247.1;Name=WP_001295247.1;Ontology_term=GO:0006568,GO:0009034;gbkey=CDS;gene=tnaA;go_function=tryptophanase activity|0009034||IEA;go_process=tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709490.2;locus_tag=PHA55_RS00040;product=tryptophanase;protein_id=WP_001295247.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	6495	7742	.	+	.	ID=gene-PHA55_RS00045;Name=tnaB;gbkey=Gene;gene=tnaB;gene_biotype=protein_coding;locus_tag=PHA55_RS00045;old_locus_tag=PHA55_00045
NZ_CP116044.1	Protein Homology	CDS	6495	7742	.	+	0	ID=cds-WP_000131911.1;Parent=gene-PHA55_RS00045;Dbxref=Genbank:WP_000131911.1;Name=WP_000131911.1;gbkey=CDS;gene=tnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312673.1;locus_tag=PHA55_RS00045;product=low affinity tryptophan permease TnaB;protein_id=WP_000131911.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	7874	9049	.	+	.	ID=gene-PHA55_RS00050;Name=mdtL;gbkey=Gene;gene=mdtL;gene_biotype=protein_coding;locus_tag=PHA55_RS00050;old_locus_tag=PHA55_00050
NZ_CP116044.1	Protein Homology	CDS	7874	9049	.	+	0	ID=cds-WP_000085987.1;Parent=gene-PHA55_RS00050;Dbxref=Genbank:WP_000085987.1;Name=WP_000085987.1;gbkey=CDS;gene=mdtL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418166.1;locus_tag=PHA55_RS00050;product=multidrug efflux MFS transporter MdtL;protein_id=WP_000085987.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	9024	9983	.	+	.	ID=gene-PHA55_RS00055;Name=yidZ;gbkey=Gene;gene=yidZ;gene_biotype=protein_coding;locus_tag=PHA55_RS00055;old_locus_tag=PHA55_00055
NZ_CP116044.1	Protein Homology	CDS	9024	9983	.	+	0	ID=cds-WP_000748502.1;Parent=gene-PHA55_RS00055;Dbxref=Genbank:WP_000748502.1;Name=WP_000748502.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yidZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418167.1;locus_tag=PHA55_RS00055;product=HTH-type transcriptional regulator YidZ;protein_id=WP_000748502.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	10140	10889	.	+	.	ID=gene-PHA55_RS00060;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=PHA55_RS00060;old_locus_tag=PHA55_00060
NZ_CP116044.1	Protein Homology	CDS	10140	10889	.	+	0	ID=cds-WP_000190670.1;Parent=gene-PHA55_RS00060;Dbxref=Genbank:WP_000190670.1;Name=WP_000190670.1;gbkey=CDS;gene=yieE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709485.2;locus_tag=PHA55_RS00060;product=4'-phosphopantetheinyl transferase superfamily protein;protein_id=WP_000190670.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	10911	11477	.	+	.	ID=gene-PHA55_RS00065;Name=yieF;gbkey=Gene;gene=yieF;gene_biotype=protein_coding;gene_synonym=chrR;locus_tag=PHA55_RS00065;old_locus_tag=PHA55_00065
NZ_CP116044.1	Protein Homology	CDS	10911	11477	.	+	0	ID=cds-WP_001291268.1;Parent=gene-PHA55_RS00065;Dbxref=Genbank:WP_001291268.1;Name=WP_001291268.1;gbkey=CDS;gene=yieF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312677.1;locus_tag=PHA55_RS00065;product=class I chromate reductase YieF;protein_id=WP_001291268.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	11531	12868	.	-	.	ID=gene-PHA55_RS00070;Name=adeP;gbkey=Gene;gene=adeP;gene_biotype=protein_coding;locus_tag=PHA55_RS00070;old_locus_tag=PHA55_00070
NZ_CP116044.1	Protein Homology	CDS	11531	12868	.	-	0	ID=cds-WP_000082693.1;Parent=gene-PHA55_RS00070;Dbxref=Genbank:WP_000082693.1;Name=WP_000082693.1;gbkey=CDS;gene=adeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312678.1;locus_tag=PHA55_RS00070;product=adenine permease AdeP;protein_id=WP_000082693.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	13035	13700	.	+	.	ID=gene-PHA55_RS00075;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=PHA55_RS00075;old_locus_tag=PHA55_00075
NZ_CP116044.1	Protein Homology	CDS	13035	13700	.	+	0	ID=cds-WP_000078043.1;Parent=gene-PHA55_RS00075;Dbxref=Genbank:WP_000078043.1;Name=WP_000078043.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418171.1;locus_tag=PHA55_RS00075;product=6-phosphogluconate phosphatase;protein_id=WP_000078043.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	13767	14240	.	+	.	ID=gene-PHA55_RS00080;Name=cbrB;gbkey=Gene;gene=cbrB;gene_biotype=protein_coding;locus_tag=PHA55_RS00080;old_locus_tag=PHA55_00080
NZ_CP116044.1	Protein Homology	CDS	13767	14240	.	+	0	ID=cds-WP_000116772.1;Parent=gene-PHA55_RS00080;Dbxref=Genbank:WP_000116772.1;Name=WP_000116772.1;gbkey=CDS;gene=cbrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709481.1;locus_tag=PHA55_RS00080;product=protein CbrB;protein_id=WP_000116772.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	14289	14876	.	+	.	ID=gene-PHA55_RS00085;Name=cbrC;gbkey=Gene;gene=cbrC;gene_biotype=protein_coding;locus_tag=PHA55_RS00085;old_locus_tag=PHA55_00085
NZ_CP116044.1	Protein Homology	CDS	14289	14876	.	+	0	ID=cds-WP_000193070.1;Parent=gene-PHA55_RS00085;Dbxref=Genbank:WP_000193070.1;Name=WP_000193070.1;Ontology_term=GO:0030153;gbkey=CDS;gene=cbrC;go_process=bacteriocin immunity|0030153||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418173.1;locus_tag=PHA55_RS00085;product=PF03691 family colicin E2 tolerance protein CbrC;protein_id=WP_000193070.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	14938	15660	.	-	.	ID=gene-PHA55_RS00090;Name=yieK;gbkey=Gene;gene=yieK;gene_biotype=protein_coding;locus_tag=PHA55_RS00090;old_locus_tag=PHA55_00090
NZ_CP116044.1	Protein Homology	CDS	14938	15660	.	-	0	ID=cds-WP_000766900.1;Parent=gene-PHA55_RS00090;Dbxref=Genbank:WP_000766900.1;Name=WP_000766900.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=yieK;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026242.1;locus_tag=PHA55_RS00090;product=glucosamine-6-phosphate deaminase;protein_id=WP_000766900.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	15675	16844	.	-	.	ID=gene-PHA55_RS00095;Name=yieL;gbkey=Gene;gene=yieL;gene_biotype=protein_coding;locus_tag=PHA55_RS00095;old_locus_tag=PHA55_00095
NZ_CP116044.1	Protein Homology	CDS	15675	16844	.	-	0	ID=cds-WP_001307476.1;Parent=gene-PHA55_RS00095;Dbxref=Genbank:WP_001307476.1;Name=WP_001307476.1;gbkey=CDS;gene=yieL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418175.3;locus_tag=PHA55_RS00095;product=esterase family protein;protein_id=WP_001307476.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	16871	18487	.	-	.	ID=gene-PHA55_RS00100;Name=bglH;gbkey=Gene;gene=bglH;gene_biotype=protein_coding;locus_tag=PHA55_RS00100;old_locus_tag=PHA55_00100
NZ_CP116044.1	Protein Homology	CDS	16871	18487	.	-	0	ID=cds-WP_000489849.1;Parent=gene-PHA55_RS00100;Dbxref=Genbank:WP_000489849.1;Name=WP_000489849.1;gbkey=CDS;gene=bglH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418176.1;locus_tag=PHA55_RS00100;product=carbohydrate-specific porin BglH;protein_id=WP_000489849.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	18573	19967	.	-	.	ID=gene-PHA55_RS00105;Name=bglB;gbkey=Gene;gene=bglB;gene_biotype=protein_coding;locus_tag=PHA55_RS00105;old_locus_tag=PHA55_00105
NZ_CP116044.1	Protein Homology	CDS	18573	19967	.	-	0	ID=cds-WP_271287481.1;Parent=gene-PHA55_RS00105;Dbxref=Genbank:WP_271287481.1;Name=WP_271287481.1;gbkey=CDS;gene=bglB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469563.1;locus_tag=PHA55_RS00105;product=6-phospho-beta-glucosidase BglB;protein_id=WP_271287481.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	19986	21863	.	-	.	ID=gene-PHA55_RS00110;Name=bglF;gbkey=Gene;gene=bglF;gene_biotype=protein_coding;locus_tag=PHA55_RS00110;old_locus_tag=PHA55_00110
NZ_CP116044.1	Protein Homology	CDS	19986	21863	.	-	0	ID=cds-WP_000137312.1;Parent=gene-PHA55_RS00110;Dbxref=Genbank:WP_000137312.1;Name=WP_000137312.1;gbkey=CDS;gene=bglF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418178.1;locus_tag=PHA55_RS00110;product=PTS beta-glucoside transporter subunit IIABC;protein_id=WP_000137312.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	21997	22833	.	-	.	ID=gene-PHA55_RS00115;Name=bglG;gbkey=Gene;gene=bglG;gene_biotype=protein_coding;locus_tag=PHA55_RS00115;old_locus_tag=PHA55_00115
NZ_CP116044.1	Protein Homology	CDS	21997	22833	.	-	0	ID=cds-WP_001295251.1;Parent=gene-PHA55_RS00115;Dbxref=Genbank:WP_001295251.1;Name=WP_001295251.1;Ontology_term=GO:0006355;gbkey=CDS;gene=bglG;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418179.1;locus_tag=PHA55_RS00115;product=transcriptional antiterminator BglG;protein_id=WP_001295251.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	23119	23844	.	-	.	ID=gene-PHA55_RS00120;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=PHA55_RS00120;old_locus_tag=PHA55_00120
NZ_CP116044.1	Protein Homology	CDS	23119	23844	.	-	0	ID=cds-WP_000377786.1;Parent=gene-PHA55_RS00120;Dbxref=Genbank:WP_000377786.1;Name=WP_000377786.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=cellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418180.1;locus_tag=PHA55_RS00120;product=phosphate signaling complex protein PhoU;protein_id=WP_000377786.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	23859	24632	.	-	.	ID=gene-PHA55_RS00125;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=PHA55_RS00125;old_locus_tag=PHA55_00125
NZ_CP116044.1	Protein Homology	CDS	23859	24632	.	-	0	ID=cds-WP_000063125.1;Parent=gene-PHA55_RS00125;Dbxref=Genbank:WP_000063125.1;Name=WP_000063125.1;Ontology_term=GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=PHA55_RS00125;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_000063125.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	24723	25613	.	-	.	ID=gene-PHA55_RS00130;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=PHA55_RS00130;old_locus_tag=PHA55_00130
NZ_CP116044.1	Protein Homology	CDS	24723	25613	.	-	0	ID=cds-WP_001251991.1;Parent=gene-PHA55_RS00130;Dbxref=Genbank:WP_001251991.1;Name=WP_001251991.1;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312689.1;locus_tag=PHA55_RS00130;product=phosphate ABC transporter permease PstA;protein_id=WP_001251991.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	25613	26572	.	-	.	ID=gene-PHA55_RS00135;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=PHA55_RS00135;old_locus_tag=PHA55_00135
NZ_CP116044.1	Protein Homology	CDS	25613	26572	.	-	0	ID=cds-WP_000741620.1;Parent=gene-PHA55_RS00135;Dbxref=Genbank:WP_000741620.1;Name=WP_000741620.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806729.1;locus_tag=PHA55_RS00135;product=phosphate ABC transporter permease PstC;protein_id=WP_000741620.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	26659	27699	.	-	.	ID=gene-PHA55_RS00140;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=PHA55_RS00140;old_locus_tag=PHA55_00140
NZ_CP116044.1	Protein Homology	CDS	26659	27699	.	-	0	ID=cds-WP_000867146.1;Parent=gene-PHA55_RS00140;Dbxref=Genbank:WP_000867146.1;Name=WP_000867146.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418184.1;locus_tag=PHA55_RS00140;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_000867146.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	27947	29020	.	-	.	ID=gene-PHA55_RS00145;Name=PHA55_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS00145;old_locus_tag=PHA55_00145
NZ_CP116044.1	Protein Homology	CDS	27947	29020	.	-	0	ID=cds-WP_001046030.1;Parent=gene-PHA55_RS00145;Dbxref=Genbank:WP_001046030.1;Name=WP_001046030.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001685709.1;locus_tag=PHA55_RS00145;product=fimbrial protein;protein_id=WP_001046030.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	29031	31553	.	-	.	ID=gene-PHA55_RS00150;Name=PHA55_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS00150;old_locus_tag=PHA55_00150
NZ_CP116044.1	Protein Homology	CDS	29031	31553	.	-	0	ID=cds-WP_000989215.1;Parent=gene-PHA55_RS00150;Dbxref=Genbank:WP_000989215.1;Name=WP_000989215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709462.1;locus_tag=PHA55_RS00150;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_000989215.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	31578	32309	.	-	.	ID=gene-PHA55_RS00155;Name=PHA55_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS00155;old_locus_tag=PHA55_00155
NZ_CP116044.1	Protein Homology	CDS	31578	32309	.	-	0	ID=cds-WP_000088114.1;Parent=gene-PHA55_RS00155;Dbxref=Genbank:WP_000088114.1;Name=WP_000088114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001572122.1;locus_tag=PHA55_RS00155;product=fimbrial chaperone;protein_id=WP_000088114.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	32357	32929	.	-	.	ID=gene-PHA55_RS00160;Name=PHA55_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS00160;old_locus_tag=PHA55_00160
NZ_CP116044.1	Protein Homology	CDS	32357	32929	.	-	0	ID=cds-WP_001584047.1;Parent=gene-PHA55_RS00160;Dbxref=Genbank:WP_001584047.1;Name=WP_001584047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709540.1;locus_tag=PHA55_RS00160;product=fimbrial protein;protein_id=WP_001584047.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	33231	35060	.	-	.	ID=gene-PHA55_RS00165;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=PHA55_RS00165;old_locus_tag=PHA55_00165
NZ_CP116044.1	Protein Homology	CDS	33231	35060	.	-	0	ID=cds-WP_000334099.1;Parent=gene-PHA55_RS00165;Dbxref=Genbank:WP_000334099.1;Name=WP_000334099.1;Ontology_term=GO:0006040,GO:0009252,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=PHA55_RS00165;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_000334099.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	35222	36592	.	-	.	ID=gene-PHA55_RS00170;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=PHA55_RS00170;old_locus_tag=PHA55_00170
NZ_CP116044.1	Protein Homology	CDS	35222	36592	.	-	0	ID=cds-WP_000933736.1;Parent=gene-PHA55_RS00170;Dbxref=Genbank:WP_000933736.1;Name=WP_000933736.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312699.1;locus_tag=PHA55_RS00170;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_000933736.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	36943	37362	.	-	.	ID=gene-PHA55_RS00175;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=PHA55_RS00175;old_locus_tag=PHA55_00175
NZ_CP116044.1	Protein Homology	CDS	36943	37362	.	-	0	ID=cds-WP_001251965.1;Parent=gene-PHA55_RS00175;Dbxref=Genbank:WP_001251965.1;Name=WP_001251965.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;gene=atpC;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=PHA55_RS00175;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_001251965.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	37383	38765	.	-	.	ID=gene-PHA55_RS00180;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=PHA55_RS00180;old_locus_tag=PHA55_00180
NZ_CP116044.1	Protein Homology	CDS	37383	38765	.	-	0	ID=cds-WP_000190506.1;Parent=gene-PHA55_RS00180;Dbxref=Genbank:WP_000190506.1;Name=WP_000190506.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpD;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=PHA55_RS00180;product=F0F1 ATP synthase subunit beta;protein_id=WP_000190506.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	38792	39655	.	-	.	ID=gene-PHA55_RS00185;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=PHA55_RS00185;old_locus_tag=PHA55_00185
NZ_CP116044.1	Protein Homology	CDS	38792	39655	.	-	0	ID=cds-WP_271287482.1;Parent=gene-PHA55_RS00185;Dbxref=Genbank:WP_271287482.1;Name=WP_271287482.1;Ontology_term=GO:0015986,GO:0046933,GO:0045261;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=PHA55_RS00185;product=F0F1 ATP synthase subunit gamma;protein_id=WP_271287482.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	39706	41247	.	-	.	ID=gene-PHA55_RS00190;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=PHA55_RS00190;old_locus_tag=PHA55_00190
NZ_CP116044.1	Protein Homology	CDS	39706	41247	.	-	0	ID=cds-WP_001176745.1;Parent=gene-PHA55_RS00190;Dbxref=Genbank:WP_001176745.1;Name=WP_001176745.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpA;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=PHA55_RS00190;product=F0F1 ATP synthase subunit alpha;protein_id=WP_001176745.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	41260	41793	.	-	.	ID=gene-PHA55_RS00195;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=PHA55_RS00195;old_locus_tag=PHA55_00195
NZ_CP116044.1	Protein Homology	CDS	41260	41793	.	-	0	ID=cds-WP_001288587.1;Parent=gene-PHA55_RS00195;Dbxref=Genbank:WP_001288587.1;Name=WP_001288587.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=PHA55_RS00195;product=F0F1 ATP synthase subunit delta;protein_id=WP_001288587.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	41808	42278	.	-	.	ID=gene-PHA55_RS00200;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=PHA55_RS00200;old_locus_tag=PHA55_00200
NZ_CP116044.1	Protein Homology	CDS	41808	42278	.	-	0	ID=cds-WP_001052219.1;Parent=gene-PHA55_RS00200;Dbxref=Genbank:WP_001052219.1;Name=WP_001052219.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=PHA55_RS00200;product=F0F1 ATP synthase subunit B;protein_id=WP_001052219.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	42340	42579	.	-	.	ID=gene-PHA55_RS00205;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=PHA55_RS00205;old_locus_tag=PHA55_00205
NZ_CP116044.1	Protein Homology	CDS	42340	42579	.	-	0	ID=cds-WP_000429386.1;Parent=gene-PHA55_RS00205;Dbxref=Genbank:WP_000429386.1;Name=WP_000429386.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=PHA55_RS00205;product=F0F1 ATP synthase subunit C;protein_id=WP_000429386.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	42626	43441	.	-	.	ID=gene-PHA55_RS00210;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=PHA55_RS00210;old_locus_tag=PHA55_00210
NZ_CP116044.1	Protein Homology	CDS	42626	43441	.	-	0	ID=cds-WP_000135625.1;Parent=gene-PHA55_RS00210;Dbxref=Genbank:WP_000135625.1;Name=WP_000135625.1;Ontology_term=GO:0015986,GO:0015078,GO:0045263;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=PHA55_RS00210;product=F0F1 ATP synthase subunit A;protein_id=WP_000135625.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	43450	43830	.	-	.	ID=gene-PHA55_RS00215;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=PHA55_RS00215;old_locus_tag=PHA55_00215
NZ_CP116044.1	Protein Homology	CDS	43450	43830	.	-	0	ID=cds-WP_000116695.1;Parent=gene-PHA55_RS00215;Dbxref=Genbank:WP_000116695.1;Name=WP_000116695.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418195.2;locus_tag=PHA55_RS00215;product=F0F1 ATP synthase subunit I;protein_id=WP_000116695.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	44447	45070	.	-	.	ID=gene-PHA55_RS00220;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=PHA55_RS00220;old_locus_tag=PHA55_00220
NZ_CP116044.1	Protein Homology	CDS	44447	45070	.	-	0	ID=cds-WP_000932839.1;Parent=gene-PHA55_RS00220;Dbxref=Genbank:WP_000932839.1;Name=WP_000932839.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168,GO:0005575;gbkey=CDS;gene=rsmG;go_component=cellular_component|0005575||IEA;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312709.1;locus_tag=PHA55_RS00220;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_000932839.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	45134	47023	.	-	.	ID=gene-PHA55_RS00225;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=PHA55_RS00225;old_locus_tag=PHA55_00225
NZ_CP116044.1	Protein Homology	CDS	45134	47023	.	-	0	ID=cds-WP_000499788.1;Parent=gene-PHA55_RS00225;Dbxref=Genbank:WP_000499788.1;Name=WP_000499788.1;Ontology_term=GO:0002098,GO:0008033,GO:0050660;gbkey=CDS;gene=mnmG;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=PHA55_RS00225;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_000499788.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	47402	47845	.	-	.	ID=gene-PHA55_RS00230;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=PHA55_RS00230;old_locus_tag=PHA55_00230
NZ_CP116044.1	Protein Homology	CDS	47402	47845	.	-	0	ID=cds-WP_000763731.1;Parent=gene-PHA55_RS00230;Dbxref=Genbank:WP_000763731.1;Name=WP_000763731.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312711.1;locus_tag=PHA55_RS00230;product=FMN-binding protein MioC;protein_id=WP_000763731.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	47935	48393	.	-	.	ID=gene-PHA55_RS00235;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=PHA55_RS00235;old_locus_tag=PHA55_00235
NZ_CP116044.1	Protein Homology	CDS	47935	48393	.	-	0	ID=cds-WP_000432970.1;Parent=gene-PHA55_RS00235;Dbxref=Genbank:WP_000432970.1;Name=WP_000432970.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312712.1;locus_tag=PHA55_RS00235;product=transcriptional regulator AsnC;protein_id=WP_000432970.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	48545	49537	.	+	.	ID=gene-PHA55_RS00240;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=PHA55_RS00240;old_locus_tag=PHA55_00240
NZ_CP116044.1	Protein Homology	CDS	48545	49537	.	+	0	ID=cds-WP_042099058.1;Parent=gene-PHA55_RS00240;Dbxref=Genbank:WP_042099058.1;Name=WP_042099058.1;Ontology_term=GO:0006529,GO:0004071;gbkey=CDS;gene=asnA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418200.1;locus_tag=PHA55_RS00240;product=aspartate--ammonia ligase;protein_id=WP_042099058.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	49542	50993	.	-	.	ID=gene-PHA55_RS00245;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=PHA55_RS00245;old_locus_tag=PHA55_00245
NZ_CP116044.1	Protein Homology	CDS	49542	50993	.	-	0	ID=cds-WP_000956630.1;Parent=gene-PHA55_RS00245;Dbxref=Genbank:WP_000956630.1;Name=WP_000956630.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312714.1;locus_tag=PHA55_RS00245;product=ATPase RavA stimulator ViaA;protein_id=WP_000956630.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	50987	52483	.	-	.	ID=gene-PHA55_RS00250;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=PHA55_RS00250;old_locus_tag=PHA55_00250
NZ_CP116044.1	Protein Homology	CDS	50987	52483	.	-	0	ID=cds-WP_001315921.1;Parent=gene-PHA55_RS00250;Dbxref=Genbank:WP_001315921.1;Name=WP_001315921.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418202.4;locus_tag=PHA55_RS00250;product=ATPase RavA;protein_id=WP_001315921.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	52706	54574	.	+	.	ID=gene-PHA55_RS00255;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=PHA55_RS00255;old_locus_tag=PHA55_00255
NZ_CP116044.1	Protein Homology	CDS	52706	54574	.	+	0	ID=cds-WP_000102319.1;Parent=gene-PHA55_RS00255;Dbxref=Genbank:WP_000102319.1;Name=WP_000102319.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=PHA55_RS00255;product=low affinity potassium transporter Kup;protein_id=WP_000102319.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	54741	55160	.	+	.	ID=gene-PHA55_RS00260;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=PHA55_RS00260;old_locus_tag=PHA55_00260
NZ_CP116044.1	Protein Homology	CDS	54741	55160	.	+	0	ID=cds-WP_000715936.1;Parent=gene-PHA55_RS00260;Dbxref=Genbank:WP_000715936.1;Name=WP_000715936.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709562.2;locus_tag=PHA55_RS00260;product=D-ribose pyranase;protein_id=WP_000715936.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	55168	56673	.	+	.	ID=gene-PHA55_RS00265;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=PHA55_RS00265;old_locus_tag=PHA55_00265
NZ_CP116044.1	Protein Homology	CDS	55168	56673	.	+	0	ID=cds-WP_000387753.1;Parent=gene-PHA55_RS00265;Dbxref=Genbank:WP_000387753.1;Name=WP_000387753.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rbsA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418205.1;locus_tag=PHA55_RS00265;product=ribose ABC transporter ATP-binding protein RbsA;protein_id=WP_000387753.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	56678	57643	.	+	.	ID=gene-PHA55_RS00270;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=PHA55_RS00270;old_locus_tag=PHA55_00270
NZ_CP116044.1	Protein Homology	CDS	56678	57643	.	+	0	ID=cds-WP_000211858.1;Parent=gene-PHA55_RS00270;Dbxref=Genbank:WP_000211858.1;Name=WP_000211858.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rbsC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=PHA55_RS00270;product=ribose ABC transporter permease;protein_id=WP_000211858.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	57668	58558	.	+	.	ID=gene-PHA55_RS00275;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=PHA55_RS00275;old_locus_tag=PHA55_00275
NZ_CP116044.1	Protein Homology	CDS	57668	58558	.	+	0	ID=cds-WP_001056273.1;Parent=gene-PHA55_RS00275;Dbxref=Genbank:WP_001056273.1;Name=WP_001056273.1;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312720.1;locus_tag=PHA55_RS00275;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=WP_001056273.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	58684	59613	.	+	.	ID=gene-PHA55_RS00280;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=PHA55_RS00280;old_locus_tag=PHA55_00280
NZ_CP116044.1	Protein Homology	CDS	58684	59613	.	+	0	ID=cds-WP_001300603.1;Parent=gene-PHA55_RS00280;Dbxref=Genbank:WP_001300603.1;Name=WP_001300603.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312721.1;locus_tag=PHA55_RS00280;product=ribokinase;protein_id=WP_001300603.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	59617	60609	.	+	.	ID=gene-PHA55_RS00285;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=PHA55_RS00285;old_locus_tag=PHA55_00285
NZ_CP116044.1	Protein Homology	CDS	59617	60609	.	+	0	ID=cds-WP_000224470.1;Parent=gene-PHA55_RS00285;Dbxref=Genbank:WP_000224470.1;Name=WP_000224470.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rbsR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312722.1;locus_tag=PHA55_RS00285;product=ribose operon transcriptional repressor RbsR;protein_id=WP_000224470.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	60575	62002	.	-	.	ID=gene-PHA55_RS00290;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=PHA55_RS00290;old_locus_tag=PHA55_00290
NZ_CP116044.1	Protein Homology	CDS	60575	62002	.	-	0	ID=cds-WP_001280864.1;Parent=gene-PHA55_RS00290;Dbxref=Genbank:WP_001280864.1;Name=WP_001280864.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418210.1;locus_tag=PHA55_RS00290;product=multidrug transporter subunit MdtD;protein_id=WP_001280864.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	62025	62717	.	-	.	ID=gene-PHA55_RS00295;Name=yieP;gbkey=Gene;gene=yieP;gene_biotype=protein_coding;locus_tag=PHA55_RS00295;old_locus_tag=PHA55_00295
NZ_CP116044.1	Protein Homology	CDS	62025	62717	.	-	0	ID=cds-WP_001131169.1;Parent=gene-PHA55_RS00295;Dbxref=Genbank:WP_001131169.1;Name=WP_001131169.1;gbkey=CDS;gene=yieP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312724.2;locus_tag=PHA55_RS00295;product=FadR/GntR family transcriptional regulator;protein_id=WP_001131169.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	63198	64739	.	+	.	ID=gene-PHA55_RS00300;Name=PHA55_RS00300;gbkey=Gene;gene_biotype=rRNA;locus_tag=PHA55_RS00300;old_locus_tag=PHA55_00300
NZ_CP116044.1	cmsearch	rRNA	63198	64739	.	+	.	ID=rna-PHA55_RS00300;Parent=gene-PHA55_RS00300;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS00300;product=16S ribosomal RNA
NZ_CP116044.1	cmsearch	exon	63198	64739	.	+	.	ID=exon-PHA55_RS00300-1;Parent=rna-PHA55_RS00300;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS00300;product=16S ribosomal RNA
NZ_CP116044.1	RefSeq	gene	64825	64900	.	+	.	ID=gene-PHA55_RS00305;Name=PHA55_RS00305;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS00305;old_locus_tag=PHA55_00305
NZ_CP116044.1	tRNAscan-SE	tRNA	64825	64900	.	+	.	ID=rna-PHA55_RS00305;Parent=gene-PHA55_RS00305;anticodon=(pos:64859..64861);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS00305;product=tRNA-Glu
NZ_CP116044.1	tRNAscan-SE	exon	64825	64900	.	+	.	ID=exon-PHA55_RS00305-1;Parent=rna-PHA55_RS00305;anticodon=(pos:64859..64861);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS00305;product=tRNA-Glu
NZ_CP116044.1	RefSeq	gene	65094	67997	.	+	.	ID=gene-PHA55_RS00310;Name=PHA55_RS00310;gbkey=Gene;gene_biotype=rRNA;locus_tag=PHA55_RS00310;old_locus_tag=PHA55_00310
NZ_CP116044.1	cmsearch	rRNA	65094	67997	.	+	.	ID=rna-PHA55_RS00310;Parent=gene-PHA55_RS00310;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS00310;product=23S ribosomal RNA
NZ_CP116044.1	cmsearch	exon	65094	67997	.	+	.	ID=exon-PHA55_RS00310-1;Parent=rna-PHA55_RS00310;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS00310;product=23S ribosomal RNA
NZ_CP116044.1	RefSeq	gene	68092	68207	.	+	.	ID=gene-PHA55_RS00315;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PHA55_RS00315;old_locus_tag=PHA55_00315
NZ_CP116044.1	cmsearch	rRNA	68092	68207	.	+	.	ID=rna-PHA55_RS00315;Parent=gene-PHA55_RS00315;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS00315;product=5S ribosomal RNA
NZ_CP116044.1	cmsearch	exon	68092	68207	.	+	.	ID=exon-PHA55_RS00315-1;Parent=rna-PHA55_RS00315;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS00315;product=5S ribosomal RNA
NZ_CP116044.1	RefSeq	gene	68262	68338	.	+	.	ID=gene-PHA55_RS00320;Name=PHA55_RS00320;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS00320;old_locus_tag=PHA55_00320
NZ_CP116044.1	tRNAscan-SE	tRNA	68262	68338	.	+	.	ID=rna-PHA55_RS00320;Parent=gene-PHA55_RS00320;anticodon=(pos:68296..68298);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS00320;product=tRNA-Asp
NZ_CP116044.1	tRNAscan-SE	exon	68262	68338	.	+	.	ID=exon-PHA55_RS00320-1;Parent=rna-PHA55_RS00320;anticodon=(pos:68296..68298);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS00320;product=tRNA-Asp
NZ_CP116044.1	RefSeq	gene	68347	68422	.	+	.	ID=gene-PHA55_RS00325;Name=PHA55_RS00325;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS00325;old_locus_tag=PHA55_00325
NZ_CP116044.1	tRNAscan-SE	tRNA	68347	68422	.	+	.	ID=rna-PHA55_RS00325;Parent=gene-PHA55_RS00325;anticodon=(pos:68380..68382);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS00325;product=tRNA-Trp
NZ_CP116044.1	tRNAscan-SE	exon	68347	68422	.	+	.	ID=exon-PHA55_RS00325-1;Parent=rna-PHA55_RS00325;anticodon=(pos:68380..68382);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS00325;product=tRNA-Trp
NZ_CP116044.1	RefSeq	gene	68518	69357	.	-	.	ID=gene-PHA55_RS00330;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=PHA55_RS00330;old_locus_tag=PHA55_00330
NZ_CP116044.1	Protein Homology	CDS	68518	69357	.	-	0	ID=cds-WP_000379246.1;Parent=gene-PHA55_RS00330;Dbxref=Genbank:WP_000379246.1;Name=WP_000379246.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312725.1;locus_tag=PHA55_RS00330;product=HTH-type transcriptional regulator HdfR;protein_id=WP_000379246.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	69476	69814	.	+	.	ID=gene-PHA55_RS00335;Name=maoP;gbkey=Gene;gene=maoP;gene_biotype=protein_coding;locus_tag=PHA55_RS00335;old_locus_tag=PHA55_00335
NZ_CP116044.1	Protein Homology	CDS	69476	69814	.	+	0	ID=cds-WP_000841001.1;Parent=gene-PHA55_RS00335;Dbxref=Genbank:WP_000841001.1;Name=WP_000841001.1;gbkey=CDS;gene=maoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312726.1;locus_tag=PHA55_RS00335;product=macrodomain Ori organization protein MaoP;protein_id=WP_000841001.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	69839	71359	.	-	.	ID=gene-PHA55_RS00340;Name=yifB;gbkey=Gene;gene=yifB;gene_biotype=protein_coding;locus_tag=PHA55_RS00340;old_locus_tag=PHA55_00340
NZ_CP116044.1	Protein Homology	CDS	69839	71359	.	-	0	ID=cds-WP_000058976.1;Parent=gene-PHA55_RS00340;Dbxref=Genbank:WP_000058976.1;Name=WP_000058976.1;Ontology_term=GO:0005524;gbkey=CDS;gene=yifB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418214.2;locus_tag=PHA55_RS00340;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_000058976.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	71712	71810	.	+	.	ID=gene-PHA55_RS00345;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=PHA55_RS00345;old_locus_tag=PHA55_00345
NZ_CP116044.1	Protein Homology	CDS	71712	71810	.	+	0	ID=cds-WP_001311244.1;Parent=gene-PHA55_RS00345;Dbxref=Genbank:WP_001311244.1;Name=WP_001311244.1;gbkey=CDS;gene=ilvL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=PHA55_RS00345;product=ilv operon leader peptide;protein_id=WP_001311244.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	71897	71947	.	+	.	ID=gene-PHA55_RS00350;Name=ilvX;gbkey=Gene;gene=ilvX;gene_biotype=protein_coding;locus_tag=PHA55_RS00350;old_locus_tag=PHA55_00350
NZ_CP116044.1	Protein Homology	CDS	71897	71947	.	+	0	ID=cds-WP_001387183.1;Parent=gene-PHA55_RS00350;Dbxref=Genbank:WP_001387183.1;Name=WP_001387183.1;gbkey=CDS;gene=ilvX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791259.1;locus_tag=PHA55_RS00350;product=peptide IlvX;protein_id=WP_001387183.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	71950	73596	.	+	.	ID=gene-PHA55_RS00355;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=PHA55_RS00355;old_locus_tag=PHA55_00355
NZ_CP116044.1	Protein Homology	CDS	71950	73596	.	+	0	ID=cds-WP_001012602.1;Parent=gene-PHA55_RS00355;Dbxref=Genbank:WP_001012602.1;Name=WP_001012602.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=PHA55_RS00355;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_001012602.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	73593	73856	.	+	.	ID=gene-PHA55_RS00360;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=PHA55_RS00360;old_locus_tag=PHA55_00360
NZ_CP116044.1	Protein Homology	CDS	73593	73856	.	+	0	ID=cds-WP_000983255.1;Parent=gene-PHA55_RS00360;Dbxref=Genbank:WP_000983255.1;Name=WP_000983255.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312730.1;locus_tag=PHA55_RS00360;product=acetolactate synthase 2 small subunit;protein_id=WP_000983255.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	73876	74805	.	+	.	ID=gene-PHA55_RS00365;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=PHA55_RS00365;old_locus_tag=PHA55_00365
NZ_CP116044.1	Protein Homology	CDS	73876	74805	.	+	0	ID=cds-WP_000208520.1;Parent=gene-PHA55_RS00365;Dbxref=Genbank:WP_000208520.1;Name=WP_000208520.1;Ontology_term=GO:0009082,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312731.1;locus_tag=PHA55_RS00365;product=branched-chain-amino-acid transaminase;protein_id=WP_000208520.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	74870	76720	.	+	.	ID=gene-PHA55_RS00370;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=PHA55_RS00370;old_locus_tag=PHA55_00370
NZ_CP116044.1	Protein Homology	CDS	74870	76720	.	+	0	ID=cds-WP_001127394.1;Parent=gene-PHA55_RS00370;Dbxref=Genbank:WP_001127394.1;Name=WP_001127394.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=PHA55_RS00370;product=dihydroxy-acid dehydratase;protein_id=WP_001127394.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	76723	78267	.	+	.	ID=gene-PHA55_RS00375;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=PHA55_RS00375;old_locus_tag=PHA55_00375
NZ_CP116044.1	Protein Homology	CDS	76723	78267	.	+	0	ID=cds-WP_000785599.1;Parent=gene-PHA55_RS00375;Dbxref=Genbank:WP_000785599.1;Name=WP_000785599.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=L-threonine ammonia-lyase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312733.1;locus_tag=PHA55_RS00375;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_000785599.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	78319	79212	.	-	.	ID=gene-PHA55_RS00380;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=PHA55_RS00380;old_locus_tag=PHA55_00380
NZ_CP116044.1	Protein Homology	CDS	78319	79212	.	-	0	ID=cds-WP_000365776.1;Parent=gene-PHA55_RS00380;Dbxref=Genbank:WP_000365776.1;Name=WP_000365776.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312734.1;locus_tag=PHA55_RS00380;product=HTH-type transcriptional activator IlvY;protein_id=WP_000365776.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	79362	80837	.	+	.	ID=gene-PHA55_RS00385;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=PHA55_RS00385;old_locus_tag=PHA55_00385
NZ_CP116044.1	Protein Homology	CDS	79362	80837	.	+	0	ID=cds-WP_000024951.1;Parent=gene-PHA55_RS00385;Dbxref=Genbank:WP_000024951.1;Name=WP_000024951.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=PHA55_RS00385;product=ketol-acid reductoisomerase;protein_id=WP_000024951.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	80883	81164	.	-	.	ID=gene-PHA55_RS00390;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=PHA55_RS00390;old_locus_tag=PHA55_00390
NZ_CP116044.1	Protein Homology	CDS	80883	81164	.	-	0	ID=cds-WP_001140258.1;Parent=gene-PHA55_RS00390;Dbxref=Genbank:WP_001140258.1;Name=WP_001140258.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004097481.1;locus_tag=PHA55_RS00390;product=peptidylprolyl isomerase PpiC;protein_id=WP_001140258.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	81317	81766	.	-	.	ID=gene-PHA55_RS00395;Name=PHA55_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS00395;old_locus_tag=PHA55_00395
NZ_CP116044.1	Protein Homology	CDS	81317	81766	.	-	0	ID=cds-WP_000996704.1;Parent=gene-PHA55_RS00395;Dbxref=Genbank:WP_000996704.1;Name=WP_000996704.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312737.1;locus_tag=PHA55_RS00395;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_000996704.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	81983	84004	.	+	.	ID=gene-PHA55_RS00400;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=PHA55_RS00400;old_locus_tag=PHA55_00400
NZ_CP116044.1	Protein Homology	CDS	81983	84004	.	+	0	ID=cds-WP_001238869.1;Parent=gene-PHA55_RS00400;Dbxref=Genbank:WP_001238869.1;Name=WP_001238869.1;Ontology_term=GO:0006268,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA unwinding involved in DNA replication|0006268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312738.1;locus_tag=PHA55_RS00400;product=DNA helicase Rep;protein_id=WP_001238869.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	84051	85535	.	-	.	ID=gene-PHA55_RS00405;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=PHA55_RS00405;old_locus_tag=PHA55_00405
NZ_CP116044.1	Protein Homology	CDS	84051	85535	.	-	0	ID=cds-WP_001295254.1;Parent=gene-PHA55_RS00405;Dbxref=Genbank:WP_001295254.1;Name=WP_001295254.1;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312739.1;locus_tag=PHA55_RS00405;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WP_001295254.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	85669	86934	.	-	.	ID=gene-PHA55_RS00410;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=PHA55_RS00410;old_locus_tag=PHA55_00410
NZ_CP116044.1	Protein Homology	CDS	85669	86934	.	-	0	ID=cds-WP_000047499.1;Parent=gene-PHA55_RS00410;Dbxref=Genbank:WP_000047499.1;Name=WP_000047499.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418227.1;locus_tag=PHA55_RS00410;product=ATP-dependent RNA helicase RhlB;protein_id=WP_000047499.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	87065	87394	.	+	.	ID=gene-PHA55_RS00415;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=PHA55_RS00415;old_locus_tag=PHA55_00415
NZ_CP116044.1	Protein Homology	CDS	87065	87394	.	+	0	ID=cds-WP_001280776.1;Parent=gene-PHA55_RS00415;Dbxref=Genbank:WP_001280776.1;Name=WP_001280776.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1;locus_tag=PHA55_RS00415;product=thioredoxin TrxA;protein_id=WP_001280776.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	87535	87636	.	+	.	ID=gene-PHA55_RS00420;Name=rhoL;gbkey=Gene;gene=rhoL;gene_biotype=protein_coding;locus_tag=PHA55_RS00420;old_locus_tag=PHA55_00420
NZ_CP116044.1	Protein Homology	CDS	87535	87636	.	+	0	ID=cds-WP_001295255.1;Parent=gene-PHA55_RS00420;Dbxref=Genbank:WP_001295255.1;Name=WP_001295255.1;gbkey=CDS;gene=rhoL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312742.1;locus_tag=PHA55_RS00420;product=rho operon leader peptide RhoL;protein_id=WP_001295255.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	87721	88980	.	+	.	ID=gene-PHA55_RS00425;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=PHA55_RS00425;old_locus_tag=PHA55_00425
NZ_CP116044.1	Protein Homology	CDS	87721	88980	.	+	0	ID=cds-WP_001054527.1;Parent=gene-PHA55_RS00425;Dbxref=Genbank:WP_001054527.1;Name=WP_001054527.1;Ontology_term=GO:0006353,GO:0004386,GO:0008186;gbkey=CDS;gene=rho;go_function=helicase activity|0004386||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=PHA55_RS00425;product=transcription termination factor Rho;protein_id=WP_001054527.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	89220	90323	.	+	.	ID=gene-PHA55_RS00430;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=PHA55_RS00430;old_locus_tag=PHA55_00430
NZ_CP116044.1	Protein Homology	CDS	89220	90323	.	+	0	ID=cds-WP_001050960.1;Parent=gene-PHA55_RS00430;Dbxref=Genbank:WP_001050960.1;Name=WP_001050960.1;Ontology_term=GO:0009246,GO:0016780;gbkey=CDS;gene=wecA;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418231.1;locus_tag=PHA55_RS00430;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_001050960.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	90335	91381	.	+	.	ID=gene-PHA55_RS00435;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=PHA55_RS00435;old_locus_tag=PHA55_00435
NZ_CP116044.1	Protein Homology	CDS	90335	91381	.	+	0	ID=cds-WP_001299252.1;Parent=gene-PHA55_RS00435;Dbxref=Genbank:WP_001299252.1;Name=WP_001299252.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709589.2;locus_tag=PHA55_RS00435;product=ECA polysaccharide chain length modulation protein;protein_id=WP_001299252.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	91437	92567	.	+	.	ID=gene-PHA55_RS00440;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=PHA55_RS00440;old_locus_tag=PHA55_00440
NZ_CP116044.1	Protein Homology	CDS	91437	92567	.	+	0	ID=cds-WP_000866672.1;Parent=gene-PHA55_RS00440;Dbxref=Genbank:WP_000866672.1;Name=WP_000866672.1;Ontology_term=GO:0009103,GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312746.2;locus_tag=PHA55_RS00440;product=UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing);protein_id=WP_000866672.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	92564	93826	.	+	.	ID=gene-PHA55_RS00445;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=PHA55_RS00445;old_locus_tag=PHA55_00445
NZ_CP116044.1	Protein Homology	CDS	92564	93826	.	+	0	ID=cds-WP_000006625.1;Parent=gene-PHA55_RS00445;Dbxref=Genbank:WP_000006625.1;Name=WP_000006625.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312747.1;locus_tag=PHA55_RS00445;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_000006625.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	93826	94893	.	+	.	ID=gene-PHA55_RS00450;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=PHA55_RS00450;old_locus_tag=PHA55_00450
NZ_CP116044.1	Protein Homology	CDS	93826	94893	.	+	0	ID=cds-WP_001226587.1;Parent=gene-PHA55_RS00450;Dbxref=Genbank:WP_001226587.1;Name=WP_001226587.1;Ontology_term=GO:0009225,GO:0008460;gbkey=CDS;gene=rffG;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709592.1;locus_tag=PHA55_RS00450;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_001226587.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	94912	95793	.	+	.	ID=gene-PHA55_RS00455;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=PHA55_RS00455;old_locus_tag=PHA55_00455
NZ_CP116044.1	Protein Homology	CDS	94912	95793	.	+	0	ID=cds-WP_000676056.1;Parent=gene-PHA55_RS00455;Dbxref=Genbank:WP_000676056.1;Name=WP_000676056.1;Ontology_term=GO:0009243,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133346.1;locus_tag=PHA55_RS00455;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_000676056.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	95771	96445	.	+	.	ID=gene-PHA55_RS00460;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=PHA55_RS00460;old_locus_tag=PHA55_00460
NZ_CP116044.1	Protein Homology	CDS	95771	96445	.	+	0	ID=cds-WP_001145195.1;Parent=gene-PHA55_RS00460;Dbxref=Genbank:WP_001145195.1;Name=WP_001145195.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026256.2;locus_tag=PHA55_RS00460;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WP_001145195.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	96450	97580	.	+	.	ID=gene-PHA55_RS00465;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=PHA55_RS00465;old_locus_tag=PHA55_00465
NZ_CP116044.1	Protein Homology	CDS	96450	97580	.	+	0	ID=cds-WP_000612036.1;Parent=gene-PHA55_RS00465;Dbxref=Genbank:WP_000612036.1;Name=WP_000612036.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418238.1;locus_tag=PHA55_RS00465;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_000612036.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	97582	98832	.	+	.	ID=gene-PHA55_RS00470;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=PHA55_RS00470;old_locus_tag=PHA55_00470
NZ_CP116044.1	Protein Homology	CDS	97582	98832	.	+	0	ID=cds-WP_000050260.1;Parent=gene-PHA55_RS00470;Dbxref=Genbank:WP_000050260.1;Name=WP_000050260.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418239.1;locus_tag=PHA55_RS00470;product=lipid III flippase WzxE;protein_id=WP_000050260.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	98829	99908	.	+	.	ID=gene-PHA55_RS00475;Name=rffT;gbkey=Gene;gene=rffT;gene_biotype=protein_coding;gene_synonym=wecF;locus_tag=PHA55_RS00475;old_locus_tag=PHA55_00475
NZ_CP116044.1	Protein Homology	CDS	98829	99908	.	+	0	ID=cds-WP_000217240.1;Parent=gene-PHA55_RS00475;Dbxref=Genbank:WP_000217240.1;Name=WP_000217240.1;gbkey=CDS;gene=rffT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709597.1;locus_tag=PHA55_RS00475;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WP_000217240.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	99905	101257	.	+	.	ID=gene-PHA55_RS00480;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=PHA55_RS00480;old_locus_tag=PHA55_00480
NZ_CP116044.1	Protein Homology	CDS	99905	101257	.	+	0	ID=cds-WP_000055132.1;Parent=gene-PHA55_RS00480;Dbxref=Genbank:WP_000055132.1;Name=WP_000055132.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312754.1;locus_tag=PHA55_RS00480;product=ECA oligosaccharide polymerase;protein_id=WP_000055132.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	101260	102000	.	+	.	ID=gene-PHA55_RS00485;Name=rffM;gbkey=Gene;gene=rffM;gene_biotype=protein_coding;locus_tag=PHA55_RS00485;old_locus_tag=PHA55_00485
NZ_CP116044.1	Protein Homology	CDS	101260	102000	.	+	0	ID=cds-WP_001064038.1;Parent=gene-PHA55_RS00485;Dbxref=Genbank:WP_001064038.1;Name=WP_001064038.1;Ontology_term=GO:0016740;gbkey=CDS;gene=rffM;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418242.1;locus_tag=PHA55_RS00485;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WP_001064038.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	102191	103576	.	+	.	ID=gene-PHA55_RS00490;Name=yifK;gbkey=Gene;gene=yifK;gene_biotype=protein_coding;locus_tag=PHA55_RS00490;old_locus_tag=PHA55_00490
NZ_CP116044.1	Protein Homology	CDS	102191	103576	.	+	0	ID=cds-WP_000774731.1;Parent=gene-PHA55_RS00490;Dbxref=Genbank:WP_000774731.1;Name=WP_000774731.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=yifK;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312756.1;locus_tag=PHA55_RS00490;product=amino acid permease;protein_id=WP_000774731.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	103679	103755	.	+	.	ID=gene-PHA55_RS00495;Name=PHA55_RS00495;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS00495;old_locus_tag=PHA55_00495
NZ_CP116044.1	tRNAscan-SE	tRNA	103679	103755	.	+	.	ID=rna-PHA55_RS00495;Parent=gene-PHA55_RS00495;anticodon=(pos:103713..103715);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS00495;product=tRNA-Arg
NZ_CP116044.1	tRNAscan-SE	exon	103679	103755	.	+	.	ID=exon-PHA55_RS00495-1;Parent=rna-PHA55_RS00495;anticodon=(pos:103713..103715);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS00495;product=tRNA-Arg
NZ_CP116044.1	RefSeq	gene	103814	103889	.	+	.	ID=gene-PHA55_RS00500;Name=PHA55_RS00500;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS00500;old_locus_tag=PHA55_00500
NZ_CP116044.1	tRNAscan-SE	tRNA	103814	103889	.	+	.	ID=rna-PHA55_RS00500;Parent=gene-PHA55_RS00500;anticodon=(pos:103847..103849);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS00500;product=tRNA-His
NZ_CP116044.1	tRNAscan-SE	exon	103814	103889	.	+	.	ID=exon-PHA55_RS00500-1;Parent=rna-PHA55_RS00500;anticodon=(pos:103847..103849);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS00500;product=tRNA-His
NZ_CP116044.1	RefSeq	gene	103910	103996	.	+	.	ID=gene-PHA55_RS00505;Name=PHA55_RS00505;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS00505;old_locus_tag=PHA55_00505
NZ_CP116044.1	tRNAscan-SE	tRNA	103910	103996	.	+	.	ID=rna-PHA55_RS00505;Parent=gene-PHA55_RS00505;anticodon=(pos:103944..103946);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS00505;product=tRNA-Leu
NZ_CP116044.1	tRNAscan-SE	exon	103910	103996	.	+	.	ID=exon-PHA55_RS00505-1;Parent=rna-PHA55_RS00505;anticodon=(pos:103944..103946);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS00505;product=tRNA-Leu
NZ_CP116044.1	RefSeq	gene	104039	104115	.	+	.	ID=gene-PHA55_RS00510;Name=PHA55_RS00510;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS00510;old_locus_tag=PHA55_00510
NZ_CP116044.1	tRNAscan-SE	tRNA	104039	104115	.	+	.	ID=rna-PHA55_RS00510;Parent=gene-PHA55_RS00510;anticodon=(pos:104073..104075);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS00510;product=tRNA-Pro
NZ_CP116044.1	tRNAscan-SE	exon	104039	104115	.	+	.	ID=exon-PHA55_RS00510-1;Parent=rna-PHA55_RS00510;anticodon=(pos:104073..104075);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS00510;product=tRNA-Pro
NZ_CP116044.1	RefSeq	gene	104262	105497	.	+	.	ID=gene-PHA55_RS00515;Name=aslB;gbkey=Gene;gene=aslB;gene_biotype=protein_coding;locus_tag=PHA55_RS00515;old_locus_tag=PHA55_00515
NZ_CP116044.1	Protein Homology	CDS	104262	105497	.	+	0	ID=cds-WP_000941530.1;Parent=gene-PHA55_RS00515;Dbxref=Genbank:WP_000941530.1;Name=WP_000941530.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;gene=aslB;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312757.1;locus_tag=PHA55_RS00515;product=anaerobic sulfatase maturase;protein_id=WP_000941530.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	105605	105742	.	-	.	ID=gene-PHA55_RS00520;Name=PHA55_RS00520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS00520;old_locus_tag=PHA55_00520;partial=true;pseudo=true;start_range=.,105605
NZ_CP116044.1	Protein Homology	CDS	105605	105742	.	-	0	ID=cds-PHA55_RS00520;Parent=gene-PHA55_RS00520;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312758.1;locus_tag=PHA55_RS00520;partial=true;product=arylsulfatase;pseudo=true;start_range=.,105605;transl_table=11
NZ_CP116044.1	RefSeq	gene	106421	107617	.	-	.	ID=gene-PHA55_RS00525;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=PHA55_RS00525;old_locus_tag=PHA55_00525
NZ_CP116044.1	Protein Homology	CDS	106421	107617	.	-	0	ID=cds-WP_000921791.1;Parent=gene-PHA55_RS00525;Dbxref=Genbank:WP_000921791.1;Name=WP_000921791.1;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312759.1;locus_tag=PHA55_RS00525;product=protoheme IX biogenesis protein HemY;protein_id=WP_000921791.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	107620	108837	.	-	.	ID=gene-PHA55_RS00530;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=PHA55_RS00530;old_locus_tag=PHA55_00530
NZ_CP116044.1	Protein Homology	CDS	107620	108837	.	-	0	ID=cds-WP_000139043.1;Parent=gene-PHA55_RS00530;Dbxref=Genbank:WP_000139043.1;Name=WP_000139043.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709605.1;locus_tag=PHA55_RS00530;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_000139043.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	108859	109599	.	-	.	ID=gene-PHA55_RS00535;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=PHA55_RS00535;old_locus_tag=PHA55_00535
NZ_CP116044.1	Protein Homology	CDS	108859	109599	.	-	0	ID=cds-WP_000026061.1;Parent=gene-PHA55_RS00535;Dbxref=Genbank:WP_000026061.1;Name=WP_000026061.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312761.1;locus_tag=PHA55_RS00535;product=uroporphyrinogen-III synthase;protein_id=WP_000026061.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	109596	110537	.	-	.	ID=gene-PHA55_RS00540;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=PHA55_RS00540;old_locus_tag=PHA55_00540
NZ_CP116044.1	Protein Homology	CDS	109596	110537	.	-	0	ID=cds-WP_001307481.1;Parent=gene-PHA55_RS00540;Dbxref=Genbank:WP_001307481.1;Name=WP_001307481.1;Ontology_term=GO:0006779,GO:0004418,GO:0005737;gbkey=CDS;gene=hemC;go_component=cytoplasm|0005737||IEA;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026260.1;locus_tag=PHA55_RS00540;product=hydroxymethylbilane synthase;protein_id=WP_001307481.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	110924	113470	.	+	.	ID=gene-PHA55_RS00545;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=PHA55_RS00545;old_locus_tag=PHA55_00545
NZ_CP116044.1	Protein Homology	CDS	110924	113470	.	+	0	ID=cds-WP_000281680.1;Parent=gene-PHA55_RS00545;Dbxref=Genbank:WP_000281680.1;Name=WP_000281680.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cyaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312763.1;locus_tag=PHA55_RS00545;product=class I adenylate cyclase;protein_id=WP_000281680.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	113510	113770	.	-	.	ID=gene-PHA55_RS00550;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=PHA55_RS00550;old_locus_tag=PHA55_00550
NZ_CP116044.1	Protein Homology	CDS	113510	113770	.	-	0	ID=cds-WP_251828301.1;Parent=gene-PHA55_RS00550;Dbxref=Genbank:WP_251828301.1;Name=WP_251828301.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=PHA55_RS00550;product=iron donor protein CyaY;protein_id=WP_251828301.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	113657	114106	.	+	.	ID=gene-PHA55_RS00555;Name=PHA55_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS00555;old_locus_tag=PHA55_00555
NZ_CP116044.1	Protein Homology	CDS	113657	114106	.	+	0	ID=cds-WP_269318808.1;Parent=gene-PHA55_RS00555;Dbxref=Genbank:WP_269318808.1;Name=WP_269318808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518828.1;locus_tag=PHA55_RS00555;product=hypothetical protein;protein_id=WP_269318808.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	114293	114496	.	+	.	ID=gene-PHA55_RS00560;Name=yifL;gbkey=Gene;gene=yifL;gene_biotype=protein_coding;locus_tag=PHA55_RS00560;old_locus_tag=PHA55_00560
NZ_CP116044.1	Protein Homology	CDS	114293	114496	.	+	0	ID=cds-WP_000799889.1;Parent=gene-PHA55_RS00560;Dbxref=Genbank:WP_000799889.1;Name=WP_000799889.1;gbkey=CDS;gene=yifL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709615.1;locus_tag=PHA55_RS00560;product=lipoprotein;protein_id=WP_000799889.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	114533	115357	.	+	.	ID=gene-PHA55_RS00565;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=PHA55_RS00565;old_locus_tag=PHA55_00565
NZ_CP116044.1	Protein Homology	CDS	114533	115357	.	+	0	ID=cds-WP_001160654.1;Parent=gene-PHA55_RS00565;Dbxref=Genbank:WP_001160654.1;Name=WP_001160654.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=PHA55_RS00565;product=diaminopimelate epimerase;protein_id=WP_001160654.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	115354	116061	.	+	.	ID=gene-PHA55_RS00570;Name=yigA;gbkey=Gene;gene=yigA;gene_biotype=protein_coding;locus_tag=PHA55_RS00570;old_locus_tag=PHA55_00570
NZ_CP116044.1	Protein Homology	CDS	115354	116061	.	+	0	ID=cds-WP_000812796.1;Parent=gene-PHA55_RS00570;Dbxref=Genbank:WP_000812796.1;Name=WP_000812796.1;gbkey=CDS;gene=yigA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418255.1;locus_tag=PHA55_RS00570;product=DUF484 family protein;protein_id=WP_000812796.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	116058	116954	.	+	.	ID=gene-PHA55_RS00575;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=PHA55_RS00575;old_locus_tag=PHA55_00575
NZ_CP116044.1	Protein Homology	CDS	116058	116954	.	+	0	ID=cds-WP_000130691.1;Parent=gene-PHA55_RS00575;Dbxref=Genbank:WP_000130691.1;Name=WP_000130691.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerC;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418256.1;locus_tag=PHA55_RS00575;product=tyrosine recombinase XerC;protein_id=WP_000130691.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	116954	117670	.	+	.	ID=gene-PHA55_RS00580;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=PHA55_RS00580;old_locus_tag=PHA55_00580
NZ_CP116044.1	Protein Homology	CDS	116954	117670	.	+	0	ID=cds-WP_001213584.1;Parent=gene-PHA55_RS00580;Dbxref=Genbank:WP_001213584.1;Name=WP_001213584.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418257.1;locus_tag=PHA55_RS00580;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WP_001213584.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	117754	119916	.	+	.	ID=gene-PHA55_RS00585;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=PHA55_RS00585;old_locus_tag=PHA55_00585
NZ_CP116044.1	Protein Homology	CDS	117754	119916	.	+	0	ID=cds-WP_000383406.1;Parent=gene-PHA55_RS00585;Dbxref=Genbank:WP_000383406.1;Name=WP_000383406.1;Ontology_term=GO:0006268,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA unwinding involved in DNA replication|0006268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418258.1;locus_tag=PHA55_RS00585;product=DNA helicase II;protein_id=WP_000383406.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	120063	120827	.	-	.	ID=gene-PHA55_RS00590;Name=yigE;gbkey=Gene;gene=yigE;gene_biotype=protein_coding;locus_tag=PHA55_RS00590;old_locus_tag=PHA55_00590
NZ_CP116044.1	Protein Homology	CDS	120063	120827	.	-	0	ID=cds-WP_000951184.1;Parent=gene-PHA55_RS00590;Dbxref=Genbank:WP_000951184.1;Name=WP_000951184.1;gbkey=CDS;gene=yigE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312772.1;locus_tag=PHA55_RS00590;product=phosphodiester glycosidase family protein;protein_id=WP_000951184.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	120989	121045	.	+	.	ID=gene-PHA55_RS00595;Name=ysgD;gbkey=Gene;gene=ysgD;gene_biotype=protein_coding;locus_tag=PHA55_RS00595;old_locus_tag=PHA55_00595
NZ_CP116044.1	Protein Homology	CDS	120989	121045	.	+	0	ID=cds-WP_211180520.1;Parent=gene-PHA55_RS00595;Dbxref=Genbank:WP_211180520.1;Name=WP_211180520.1;gbkey=CDS;gene=ysgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051213.1;locus_tag=PHA55_RS00595;product=protein YsgD;protein_id=WP_211180520.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	121197	122147	.	+	.	ID=gene-PHA55_RS00600;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=PHA55_RS00600;old_locus_tag=PHA55_00600
NZ_CP116044.1	Protein Homology	CDS	121197	122147	.	+	0	ID=cds-WP_000947159.1;Parent=gene-PHA55_RS00600;Dbxref=Genbank:WP_000947159.1;Name=WP_000947159.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095;gbkey=CDS;gene=corA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=PHA55_RS00600;product=magnesium/cobalt transporter CorA;protein_id=WP_000947159.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	122189	122680	.	-	.	ID=gene-PHA55_RS00605;Name=PHA55_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS00605;old_locus_tag=PHA55_00605
NZ_CP116044.1	Protein Homology	CDS	122189	122680	.	-	0	ID=cds-WP_000837562.1;Parent=gene-PHA55_RS00605;Dbxref=Genbank:WP_000837562.1;Name=WP_000837562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502665.1;locus_tag=PHA55_RS00605;product=DUF943 family protein;protein_id=WP_000837562.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	122677	123525	.	-	.	ID=gene-PHA55_RS00610;Name=PHA55_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS00610;old_locus_tag=PHA55_00610
NZ_CP116044.1	Protein Homology	CDS	122677	123525	.	-	0	ID=cds-WP_001059703.1;Parent=gene-PHA55_RS00610;Dbxref=Genbank:WP_001059703.1;Name=WP_001059703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312774.1;locus_tag=PHA55_RS00610;product=DUF3289 family protein;protein_id=WP_001059703.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	123705	123857	.	+	.	ID=gene-PHA55_RS00615;Name=PHA55_RS00615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS00615;old_locus_tag=PHA55_00615;partial=true;pseudo=true;start_range=.,123705
NZ_CP116044.1	Protein Homology	CDS	123705	123857	.	+	0	ID=cds-PHA55_RS00615;Parent=gene-PHA55_RS00615;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=PHA55_RS00615;partial=true;product=CorA family divalent cation transporter;pseudo=true;start_range=.,123705;transl_table=11
NZ_CP116044.1	RefSeq	gene	124481	124780	.	+	.	ID=gene-PHA55_RS00620;Name=PHA55_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS00620;old_locus_tag=PHA55_00620
NZ_CP116044.1	Protein Homology	CDS	124481	124780	.	+	0	ID=cds-WP_000526434.1;Parent=gene-PHA55_RS00620;Dbxref=Genbank:WP_000526434.1;Name=WP_000526434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000427365.1;locus_tag=PHA55_RS00620;product=hypothetical protein;protein_id=WP_000526434.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	124827	125714	.	-	.	ID=gene-PHA55_RS00625;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=PHA55_RS00625;old_locus_tag=PHA55_00625
NZ_CP116044.1	Protein Homology	CDS	124827	125714	.	-	0	ID=cds-WP_260589864.1;Parent=gene-PHA55_RS00625;Dbxref=Genbank:WP_260589864.1;Name=WP_260589864.1;Ontology_term=GO:0016020;gbkey=CDS;gene=rarD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000380001.1;locus_tag=PHA55_RS00625;product=EamA family transporter RarD;protein_id=WP_260589864.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	125766	126233	.	-	.	ID=gene-PHA55_RS00630;Name=yigI;gbkey=Gene;gene=yigI;gene_biotype=protein_coding;locus_tag=PHA55_RS00630;old_locus_tag=PHA55_00630
NZ_CP116044.1	Protein Homology	CDS	125766	126233	.	-	0	ID=cds-WP_001277142.1;Parent=gene-PHA55_RS00630;Dbxref=Genbank:WP_001277142.1;Name=WP_001277142.1;gbkey=CDS;gene=yigI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312777.2;locus_tag=PHA55_RS00630;product=acyl-CoA thioesterase YigI;protein_id=WP_001277142.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	126398	127267	.	+	.	ID=gene-PHA55_RS00635;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=PHA55_RS00635;old_locus_tag=PHA55_00635
NZ_CP116044.1	Protein Homology	CDS	126398	127267	.	+	0	ID=cds-WP_001259700.1;Parent=gene-PHA55_RS00635;Dbxref=Genbank:WP_001259700.1;Name=WP_001259700.1;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312778.1;locus_tag=PHA55_RS00635;product=phospholipase A;protein_id=WP_001259700.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	127400	129229	.	+	.	ID=gene-PHA55_RS00640;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=PHA55_RS00640;old_locus_tag=PHA55_00640
NZ_CP116044.1	Protein Homology	CDS	127400	129229	.	+	0	ID=cds-WP_000035581.1;Parent=gene-PHA55_RS00640;Dbxref=Genbank:WP_000035581.1;Name=WP_000035581.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026263.3;locus_tag=PHA55_RS00640;product=ATP-dependent DNA helicase RecQ;protein_id=WP_000035581.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	129293	129913	.	+	.	ID=gene-PHA55_RS00645;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=PHA55_RS00645;old_locus_tag=PHA55_00645
NZ_CP116044.1	Protein Homology	CDS	129293	129913	.	+	0	ID=cds-WP_000928824.1;Parent=gene-PHA55_RS00645;Dbxref=Genbank:WP_000928824.1;Name=WP_000928824.1;Ontology_term=GO:0006865;gbkey=CDS;gene=rhtC;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312780.1;locus_tag=PHA55_RS00645;product=threonine export protein RhtC;protein_id=WP_000928824.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	129975	130595	.	-	.	ID=gene-PHA55_RS00650;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=PHA55_RS00650;old_locus_tag=PHA55_00650
NZ_CP116044.1	Protein Homology	CDS	129975	130595	.	-	0	ID=cds-WP_000171710.1;Parent=gene-PHA55_RS00650;Dbxref=Genbank:WP_000171710.1;Name=WP_000171710.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=rhtB;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312781.1;locus_tag=PHA55_RS00650;product=homoserine/homoserine lactone efflux protein;protein_id=WP_000171710.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	130706	131728	.	+	.	ID=gene-PHA55_RS00655;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=PHA55_RS00655;old_locus_tag=PHA55_00655
NZ_CP116044.1	Protein Homology	CDS	130706	131728	.	+	0	ID=cds-WP_000487654.1;Parent=gene-PHA55_RS00655;Dbxref=Genbank:WP_000487654.1;Name=WP_000487654.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026266.1;locus_tag=PHA55_RS00655;product=lysophospholipase L2;protein_id=WP_000487654.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	131736	132536	.	+	.	ID=gene-PHA55_RS00660;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=PHA55_RS00660;old_locus_tag=PHA55_00660
NZ_CP116044.1	Protein Homology	CDS	131736	132536	.	+	0	ID=cds-WP_000285352.1;Parent=gene-PHA55_RS00660;Dbxref=Genbank:WP_000285352.1;Name=WP_000285352.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312783.1;locus_tag=PHA55_RS00660;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WP_000285352.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	132612	133511	.	+	.	ID=gene-PHA55_RS00665;Name=bioP;gbkey=Gene;gene=bioP;gene_biotype=protein_coding;locus_tag=PHA55_RS00665;old_locus_tag=PHA55_00665
NZ_CP116044.1	Protein Homology	CDS	132612	133511	.	+	0	ID=cds-WP_001196238.1;Parent=gene-PHA55_RS00665;Dbxref=Genbank:WP_001196238.1;Name=WP_001196238.1;gbkey=CDS;gene=bioP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312784.1;locus_tag=PHA55_RS00665;product=biotin transporter;protein_id=WP_001196238.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	133399	134352	.	-	.	ID=gene-PHA55_RS00670;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=PHA55_RS00670;old_locus_tag=PHA55_00670
NZ_CP116044.1	Protein Homology	CDS	133399	134352	.	-	0	ID=cds-WP_000573621.1;Parent=gene-PHA55_RS00670;Dbxref=Genbank:WP_000573621.1;Name=WP_000573621.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312785.1;locus_tag=PHA55_RS00670;product=HTH-type transcriptional regulator MetR;protein_id=WP_000573621.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	134470	136731	.	+	.	ID=gene-PHA55_RS00675;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=PHA55_RS00675;old_locus_tag=PHA55_00675
NZ_CP116044.1	Protein Homology	CDS	134470	136731	.	+	0	ID=cds-WP_271287483.1;Parent=gene-PHA55_RS00675;Dbxref=Genbank:WP_271287483.1;Name=WP_271287483.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709635.1;locus_tag=PHA55_RS00675;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_271287483.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	136770	137585	.	-	.	ID=gene-PHA55_RS00680;Name=ysgA;gbkey=Gene;gene=ysgA;gene_biotype=protein_coding;locus_tag=PHA55_RS00680;old_locus_tag=PHA55_00680
NZ_CP116044.1	Protein Homology	CDS	136770	137585	.	-	0	ID=cds-WP_001307486.1;Parent=gene-PHA55_RS00680;Dbxref=Genbank:WP_001307486.1;Name=WP_001307486.1;gbkey=CDS;gene=ysgA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026268.1;locus_tag=PHA55_RS00680;product=dienelactone hydrolase family protein;protein_id=WP_001307486.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	137847	138608	.	+	.	ID=gene-PHA55_RS00685;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=PHA55_RS00685;old_locus_tag=PHA55_00685
NZ_CP116044.1	Protein Homology	CDS	137847	138608	.	+	0	ID=cds-WP_000045180.1;Parent=gene-PHA55_RS00685;Dbxref=Genbank:WP_000045180.1;Name=WP_000045180.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312788.1;locus_tag=PHA55_RS00685;product=uridine phosphorylase;protein_id=WP_000045180.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	138748	140175	.	+	.	ID=gene-PHA55_RS00690;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=PHA55_RS00690;old_locus_tag=PHA55_00690
NZ_CP116044.1	Protein Homology	CDS	138748	140175	.	+	0	ID=cds-WP_000347714.1;Parent=gene-PHA55_RS00690;Dbxref=Genbank:WP_000347714.1;Name=WP_000347714.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312789.1;locus_tag=PHA55_RS00690;product=DNA recombination protein RmuC;protein_id=WP_000347714.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	140270	141025	.	+	.	ID=gene-PHA55_RS00695;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=PHA55_RS00695;old_locus_tag=PHA55_00695
NZ_CP116044.1	Protein Homology	CDS	140270	141025	.	+	0	ID=cds-WP_000227958.1;Parent=gene-PHA55_RS00695;Dbxref=Genbank:WP_000227958.1;Name=WP_000227958.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312790.1;locus_tag=PHA55_RS00695;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_000227958.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	141039	141644	.	+	.	ID=gene-PHA55_RS00700;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=PHA55_RS00700;old_locus_tag=PHA55_00700
NZ_CP116044.1	Protein Homology	CDS	141039	141644	.	+	0	ID=cds-WP_001295259.1;Parent=gene-PHA55_RS00700;Dbxref=Genbank:WP_001295259.1;Name=WP_001295259.1;gbkey=CDS;gene=ubiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418278.1;locus_tag=PHA55_RS00700;product=ubiquinone biosynthesis protein UbiJ;protein_id=WP_001295259.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	141641	143281	.	+	.	ID=gene-PHA55_RS00705;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=PHA55_RS00705;old_locus_tag=PHA55_00705
NZ_CP116044.1	Protein Homology	CDS	141641	143281	.	+	0	ID=cds-WP_000187530.1;Parent=gene-PHA55_RS00705;Dbxref=Genbank:WP_000187530.1;Name=WP_000187530.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312792.1;locus_tag=PHA55_RS00705;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_000187530.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	143360	143629	.	+	.	ID=gene-PHA55_RS00710;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=PHA55_RS00710;old_locus_tag=PHA55_00710
NZ_CP116044.1	Protein Homology	CDS	143360	143629	.	+	0	ID=cds-WP_001295260.1;Parent=gene-PHA55_RS00710;Dbxref=Genbank:WP_001295260.1;Name=WP_001295260.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312793.1;locus_tag=PHA55_RS00710;product=Sec-independent protein translocase subunit TatA;protein_id=WP_001295260.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	143633	144148	.	+	.	ID=gene-PHA55_RS00715;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=PHA55_RS00715;old_locus_tag=PHA55_00715
NZ_CP116044.1	Protein Homology	CDS	143633	144148	.	+	0	ID=cds-WP_000459594.1;Parent=gene-PHA55_RS00715;Dbxref=Genbank:WP_000459594.1;Name=WP_000459594.1;Ontology_term=GO:0015031,GO:0015628;gbkey=CDS;gene=tatB;go_process=protein transport|0015031||IEA,protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312794.1;locus_tag=PHA55_RS00715;product=Sec-independent protein translocase protein TatB;protein_id=WP_000459594.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	144151	144927	.	+	.	ID=gene-PHA55_RS00720;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=PHA55_RS00720;old_locus_tag=PHA55_00720
NZ_CP116044.1	Protein Homology	CDS	144151	144927	.	+	0	ID=cds-WP_000109943.1;Parent=gene-PHA55_RS00720;Dbxref=Genbank:WP_000109943.1;Name=WP_000109943.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312795.1;locus_tag=PHA55_RS00720;product=Sec-independent protein translocase subunit TatC;protein_id=WP_000109943.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	144969	145751	.	+	.	ID=gene-PHA55_RS00725;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=PHA55_RS00725;old_locus_tag=PHA55_00725
NZ_CP116044.1	Protein Homology	CDS	144969	145751	.	+	0	ID=cds-WP_001296978.1;Parent=gene-PHA55_RS00725;Dbxref=Genbank:WP_001296978.1;Name=WP_001296978.1;Ontology_term=GO:0008408;gbkey=CDS;gene=tatD;go_function=3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312796.1;locus_tag=PHA55_RS00725;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=WP_001296978.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	145748	146236	.	-	.	ID=gene-PHA55_RS00730;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=PHA55_RS00730;old_locus_tag=PHA55_00730
NZ_CP116044.1	Protein Homology	CDS	145748	146236	.	-	0	ID=cds-WP_260589866.1;Parent=gene-PHA55_RS00730;Dbxref=Genbank:WP_260589866.1;Name=WP_260589866.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312797.1;locus_tag=PHA55_RS00730;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_260589866.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	146403	147896	.	+	.	ID=gene-PHA55_RS00735;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=PHA55_RS00735;old_locus_tag=PHA55_00735
NZ_CP116044.1	Protein Homology	CDS	146403	147896	.	+	0	ID=cds-WP_000339804.1;Parent=gene-PHA55_RS00735;Dbxref=Genbank:WP_000339804.1;Name=WP_000339804.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418285.1;locus_tag=PHA55_RS00735;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_000339804.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	147942	148643	.	+	.	ID=gene-PHA55_RS00740;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=PHA55_RS00740;old_locus_tag=PHA55_00740
NZ_CP116044.1	Protein Homology	CDS	147942	148643	.	+	0	ID=cds-WP_000209826.1;Parent=gene-PHA55_RS00740;Dbxref=Genbank:WP_000209826.1;Name=WP_000209826.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312799.1;locus_tag=PHA55_RS00740;product=NAD(P)H-flavin reductase;protein_id=WP_000209826.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	148835	149998	.	-	.	ID=gene-PHA55_RS00745;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=PHA55_RS00745;old_locus_tag=PHA55_00745
NZ_CP116044.1	Protein Homology	CDS	148835	149998	.	-	0	ID=cds-WP_000438743.1;Parent=gene-PHA55_RS00745;Dbxref=Genbank:WP_000438743.1;Name=WP_000438743.1;Ontology_term=GO:0009062,GO:0003988;gbkey=CDS;gene=fadA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312800.1;locus_tag=PHA55_RS00745;product=acetyl-CoA C-acyltransferase FadA;protein_id=WP_000438743.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	150008	152197	.	-	.	ID=gene-PHA55_RS00750;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=PHA55_RS00750;old_locus_tag=PHA55_00750
NZ_CP116044.1	Protein Homology	CDS	150008	152197	.	-	0	ID=cds-WP_000965951.1;Parent=gene-PHA55_RS00750;Dbxref=Genbank:WP_000965951.1;Name=WP_000965951.1;Ontology_term=GO:0009062,GO:0003857,GO:0004165,GO:0004300,GO:0008692;gbkey=CDS;gene=fadB;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,delta(3)-delta(2)-enoyl-CoA isomerase activity|0004165||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418288.1;locus_tag=PHA55_RS00750;product=fatty acid oxidation complex subunit alpha FadB;protein_id=WP_000965951.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	152387	153718	.	+	.	ID=gene-PHA55_RS00755;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=PHA55_RS00755;old_locus_tag=PHA55_00755
NZ_CP116044.1	Protein Homology	CDS	152387	153718	.	+	0	ID=cds-WP_000444561.1;Parent=gene-PHA55_RS00755;Dbxref=Genbank:WP_000444561.1;Name=WP_000444561.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418289.1;locus_tag=PHA55_RS00755;product=Xaa-Pro dipeptidase;protein_id=WP_000444561.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	153718	154332	.	+	.	ID=gene-PHA55_RS00760;Name=yigZ;gbkey=Gene;gene=yigZ;gene_biotype=protein_coding;locus_tag=PHA55_RS00760;old_locus_tag=PHA55_00760
NZ_CP116044.1	Protein Homology	CDS	153718	154332	.	+	0	ID=cds-WP_001296979.1;Parent=gene-PHA55_RS00760;Dbxref=Genbank:WP_001296979.1;Name=WP_001296979.1;gbkey=CDS;gene=yigZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709652.2;locus_tag=PHA55_RS00760;product=IMPACT family protein;protein_id=WP_001296979.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	154371	155822	.	+	.	ID=gene-PHA55_RS00765;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=PHA55_RS00765;old_locus_tag=PHA55_00765
NZ_CP116044.1	Protein Homology	CDS	154371	155822	.	+	0	ID=cds-WP_000545677.1;Parent=gene-PHA55_RS00765;Dbxref=Genbank:WP_000545677.1;Name=WP_000545677.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=PHA55_RS00765;product=Trk system potassium transporter TrkH;protein_id=WP_000545677.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	155834	156379	.	+	.	ID=gene-PHA55_RS00770;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=PHA55_RS00770;old_locus_tag=PHA55_00770
NZ_CP116044.1	Protein Homology	CDS	155834	156379	.	+	0	ID=cds-WP_000853970.1;Parent=gene-PHA55_RS00770;Dbxref=Genbank:WP_000853970.1;Name=WP_000853970.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312805.1;locus_tag=PHA55_RS00770;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_000853970.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	156755	158296	.	+	.	ID=gene-PHA55_RS00775;Name=PHA55_RS00775;gbkey=Gene;gene_biotype=rRNA;locus_tag=PHA55_RS00775;old_locus_tag=PHA55_00775
NZ_CP116044.1	cmsearch	rRNA	156755	158296	.	+	.	ID=rna-PHA55_RS00775;Parent=gene-PHA55_RS00775;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS00775;product=16S ribosomal RNA
NZ_CP116044.1	cmsearch	exon	156755	158296	.	+	.	ID=exon-PHA55_RS00775-1;Parent=rna-PHA55_RS00775;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS00775;product=16S ribosomal RNA
NZ_CP116044.1	RefSeq	gene	158365	158441	.	+	.	ID=gene-PHA55_RS00780;Name=PHA55_RS00780;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS00780;old_locus_tag=PHA55_00780
NZ_CP116044.1	tRNAscan-SE	tRNA	158365	158441	.	+	.	ID=rna-PHA55_RS00780;Parent=gene-PHA55_RS00780;anticodon=(pos:158399..158401);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS00780;product=tRNA-Ile
NZ_CP116044.1	tRNAscan-SE	exon	158365	158441	.	+	.	ID=exon-PHA55_RS00780-1;Parent=rna-PHA55_RS00780;anticodon=(pos:158399..158401);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS00780;product=tRNA-Ile
NZ_CP116044.1	RefSeq	gene	158484	158559	.	+	.	ID=gene-PHA55_RS00785;Name=PHA55_RS00785;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS00785;old_locus_tag=PHA55_00785
NZ_CP116044.1	tRNAscan-SE	tRNA	158484	158559	.	+	.	ID=rna-PHA55_RS00785;Parent=gene-PHA55_RS00785;anticodon=(pos:158517..158519);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS00785;product=tRNA-Ala
NZ_CP116044.1	tRNAscan-SE	exon	158484	158559	.	+	.	ID=exon-PHA55_RS00785-1;Parent=rna-PHA55_RS00785;anticodon=(pos:158517..158519);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS00785;product=tRNA-Ala
NZ_CP116044.1	RefSeq	gene	158743	161646	.	+	.	ID=gene-PHA55_RS00790;Name=PHA55_RS00790;gbkey=Gene;gene_biotype=rRNA;locus_tag=PHA55_RS00790;old_locus_tag=PHA55_00790
NZ_CP116044.1	cmsearch	rRNA	158743	161646	.	+	.	ID=rna-PHA55_RS00790;Parent=gene-PHA55_RS00790;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS00790;product=23S ribosomal RNA
NZ_CP116044.1	cmsearch	exon	158743	161646	.	+	.	ID=exon-PHA55_RS00790-1;Parent=rna-PHA55_RS00790;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS00790;product=23S ribosomal RNA
NZ_CP116044.1	RefSeq	gene	161741	161856	.	+	.	ID=gene-PHA55_RS00795;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PHA55_RS00795;old_locus_tag=PHA55_00795
NZ_CP116044.1	cmsearch	rRNA	161741	161856	.	+	.	ID=rna-PHA55_RS00795;Parent=gene-PHA55_RS00795;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS00795;product=5S ribosomal RNA
NZ_CP116044.1	cmsearch	exon	161741	161856	.	+	.	ID=exon-PHA55_RS00795-1;Parent=rna-PHA55_RS00795;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS00795;product=5S ribosomal RNA
NZ_CP116044.1	RefSeq	gene	161960	162487	.	-	.	ID=gene-PHA55_RS00800;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=PHA55_RS00800;old_locus_tag=PHA55_00800
NZ_CP116044.1	Protein Homology	CDS	161960	162487	.	-	0	ID=cds-WP_000907641.1;Parent=gene-PHA55_RS00800;Dbxref=Genbank:WP_000907641.1;Name=WP_000907641.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418293.2;locus_tag=PHA55_RS00800;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=WP_000907641.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	162469	163053	.	-	.	ID=gene-PHA55_RS00805;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=PHA55_RS00805;old_locus_tag=PHA55_00805
NZ_CP116044.1	Protein Homology	CDS	162469	163053	.	-	0	ID=cds-WP_001052174.1;Parent=gene-PHA55_RS00805;Dbxref=Genbank:WP_001052174.1;Name=WP_001052174.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418294.1;locus_tag=PHA55_RS00805;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_001052174.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	163123	163392	.	+	.	ID=gene-PHA55_RS00810;Name=yihD;gbkey=Gene;gene=yihD;gene_biotype=protein_coding;locus_tag=PHA55_RS00810;old_locus_tag=PHA55_00810
NZ_CP116044.1	Protein Homology	CDS	163123	163392	.	+	0	ID=cds-WP_001295263.1;Parent=gene-PHA55_RS00810;Dbxref=Genbank:WP_001295263.1;Name=WP_001295263.1;gbkey=CDS;gene=yihD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=PHA55_RS00810;product=YihD family protein;protein_id=WP_001295263.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	163469	164455	.	+	.	ID=gene-PHA55_RS00815;Name=srkA;gbkey=Gene;gene=srkA;gene_biotype=protein_coding;locus_tag=PHA55_RS00815;old_locus_tag=PHA55_00815
NZ_CP116044.1	Protein Homology	CDS	163469	164455	.	+	0	ID=cds-WP_001065520.1;Parent=gene-PHA55_RS00815;Dbxref=Genbank:WP_001065520.1;Name=WP_001065520.1;gbkey=CDS;gene=srkA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312809.1;locus_tag=PHA55_RS00815;product=stress response kinase SrkA;protein_id=WP_001065520.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	164472	165098	.	+	.	ID=gene-PHA55_RS00820;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=PHA55_RS00820;old_locus_tag=PHA55_00820
NZ_CP116044.1	Protein Homology	CDS	164472	165098	.	+	0	ID=cds-WP_000725337.1;Parent=gene-PHA55_RS00820;Dbxref=Genbank:WP_000725337.1;Name=WP_000725337.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312810.1;locus_tag=PHA55_RS00820;product=thiol:disulfide interchange protein DsbA;protein_id=WP_000725337.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	165177	166683	.	+	.	ID=gene-PHA55_RS00825;Name=yihF;gbkey=Gene;gene=yihF;gene_biotype=pseudogene;locus_tag=PHA55_RS00825;old_locus_tag=PHA55_00825;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	165177	166683	.	+	0	ID=cds-PHA55_RS00825;Parent=gene-PHA55_RS00825;Note=frameshifted%3B internal stop;gbkey=CDS;gene=yihF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553149.1;locus_tag=PHA55_RS00825;product=DUF945 family protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	166724	167656	.	-	.	ID=gene-PHA55_RS00830;Name=yihG;gbkey=Gene;gene=yihG;gene_biotype=protein_coding;locus_tag=PHA55_RS00830;old_locus_tag=PHA55_00830
NZ_CP116044.1	Protein Homology	CDS	166724	167656	.	-	0	ID=cds-WP_001593843.1;Parent=gene-PHA55_RS00830;Dbxref=Genbank:WP_001593843.1;Name=WP_001593843.1;gbkey=CDS;gene=yihG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312812.1;locus_tag=PHA55_RS00830;product=acyltransferase;protein_id=WP_001593843.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	168020	170806	.	+	.	ID=gene-PHA55_RS00835;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=PHA55_RS00835;old_locus_tag=PHA55_00835
NZ_CP116044.1	Protein Homology	CDS	168020	170806	.	+	0	ID=cds-WP_000250006.1;Parent=gene-PHA55_RS00835;Dbxref=Genbank:WP_000250006.1;Name=WP_000250006.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418300.1;locus_tag=PHA55_RS00835;product=DNA polymerase I;protein_id=WP_000250006.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	171188	171820	.	-	.	ID=gene-PHA55_RS00840;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=PHA55_RS00840;old_locus_tag=PHA55_00840
NZ_CP116044.1	Protein Homology	CDS	171188	171820	.	-	0	ID=cds-WP_000183349.1;Parent=gene-PHA55_RS00840;Dbxref=Genbank:WP_000183349.1;Name=WP_000183349.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418301.3;locus_tag=PHA55_RS00840;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_000183349.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	172055	172283	.	+	.	ID=gene-PHA55_RS00845;Name=PHA55_RS00845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS00845;old_locus_tag=PHA55_00845;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	172055	172283	.	+	0	ID=cds-PHA55_RS00845;Parent=gene-PHA55_RS00845;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001578146.1;locus_tag=PHA55_RS00845;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	172402	172911	.	+	.	ID=gene-PHA55_RS00850;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=PHA55_RS00850;old_locus_tag=PHA55_00850
NZ_CP116044.1	Protein Homology	CDS	172402	172911	.	+	0	ID=cds-WP_001295266.1;Parent=gene-PHA55_RS00850;Dbxref=Genbank:WP_001295266.1;Name=WP_001295266.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418302.1;locus_tag=PHA55_RS00850;product=Der GTPase-activating protein YihI;protein_id=WP_001295266.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	173100	174473	.	+	.	ID=gene-PHA55_RS00855;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=PHA55_RS00855;old_locus_tag=PHA55_00855
NZ_CP116044.1	Protein Homology	CDS	173100	174473	.	+	0	ID=cds-WP_000116090.1;Parent=gene-PHA55_RS00855;Dbxref=Genbank:WP_000116090.1;Name=WP_000116090.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemN;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312816.2;locus_tag=PHA55_RS00855;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_000116090.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	174663	174773	.	-	.	ID=gene-PHA55_RS00860;Name=yshB;gbkey=Gene;gene=yshB;gene_biotype=protein_coding;locus_tag=PHA55_RS00860;old_locus_tag=PHA55_00860
NZ_CP116044.1	Protein Homology	CDS	174663	174773	.	-	0	ID=cds-WP_000893994.1;Parent=gene-PHA55_RS00860;Dbxref=Genbank:WP_000893994.1;Name=WP_000893994.1;gbkey=CDS;gene=yshB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791260.1;locus_tag=PHA55_RS00860;product=YshB family small membrane protein;protein_id=WP_000893994.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	174885	176294	.	-	.	ID=gene-PHA55_RS00865;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=PHA55_RS00865;old_locus_tag=PHA55_00865
NZ_CP116044.1	Protein Homology	CDS	174885	176294	.	-	0	ID=cds-WP_001188776.1;Parent=gene-PHA55_RS00865;Dbxref=Genbank:WP_001188776.1;Name=WP_001188776.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=PHA55_RS00865;product=nitrogen regulation protein NR(I);protein_id=WP_001188776.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	176306	177355	.	-	.	ID=gene-PHA55_RS00870;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=PHA55_RS00870;old_locus_tag=PHA55_00870
NZ_CP116044.1	Protein Homology	CDS	176306	177355	.	-	0	ID=cds-WP_000190577.1;Parent=gene-PHA55_RS00870;Dbxref=Genbank:WP_000190577.1;Name=WP_000190577.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312818.1;locus_tag=PHA55_RS00870;product=nitrogen regulation protein NR(II);protein_id=WP_000190577.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	177529	178938	.	-	.	ID=gene-PHA55_RS00875;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=PHA55_RS00875;old_locus_tag=PHA55_00875
NZ_CP116044.1	Protein Homology	CDS	177529	178938	.	-	0	ID=cds-WP_001271717.1;Parent=gene-PHA55_RS00875;Dbxref=Genbank:WP_001271717.1;Name=WP_001271717.1;Ontology_term=GO:0006542,GO:0006807,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamate-ammonia ligase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA,nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=PHA55_RS00875;product=glutamate--ammonia ligase;protein_id=WP_001271717.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	179311	181134	.	+	.	ID=gene-PHA55_RS00880;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=PHA55_RS00880;old_locus_tag=PHA55_00880
NZ_CP116044.1	Protein Homology	CDS	179311	181134	.	+	0	ID=cds-WP_000570668.1;Parent=gene-PHA55_RS00880;Dbxref=Genbank:WP_000570668.1;Name=WP_000570668.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312820.1;locus_tag=PHA55_RS00880;product=ribosome-dependent GTPase TypA;protein_id=WP_000570668.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	181351	182061	.	+	.	ID=gene-PHA55_RS00885;Name=yihL;gbkey=Gene;gene=yihL;gene_biotype=protein_coding;locus_tag=PHA55_RS00885;old_locus_tag=PHA55_00885
NZ_CP116044.1	Protein Homology	CDS	181351	182061	.	+	0	ID=cds-WP_000829798.1;Parent=gene-PHA55_RS00885;Dbxref=Genbank:WP_000829798.1;Name=WP_000829798.1;gbkey=CDS;gene=yihL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312821.1;locus_tag=PHA55_RS00885;product=GntR family transcriptional regulator;protein_id=WP_000829798.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	182069	183049	.	+	.	ID=gene-PHA55_RS00890;Name=yihM;gbkey=Gene;gene=yihM;gene_biotype=protein_coding;locus_tag=PHA55_RS00890;old_locus_tag=PHA55_00890
NZ_CP116044.1	Protein Homology	CDS	182069	183049	.	+	0	ID=cds-WP_000256396.1;Parent=gene-PHA55_RS00890;Dbxref=Genbank:WP_000256396.1;Name=WP_000256396.1;gbkey=CDS;gene=yihM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418309.1;locus_tag=PHA55_RS00890;product=TIM barrel protein;protein_id=WP_000256396.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	183151	184416	.	+	.	ID=gene-PHA55_RS00895;Name=yihN;gbkey=Gene;gene=yihN;gene_biotype=protein_coding;locus_tag=PHA55_RS00895;old_locus_tag=PHA55_00895
NZ_CP116044.1	Protein Homology	CDS	183151	184416	.	+	0	ID=cds-WP_000956320.1;Parent=gene-PHA55_RS00895;Dbxref=Genbank:WP_000956320.1;Name=WP_000956320.1;gbkey=CDS;gene=yihN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312823.1;locus_tag=PHA55_RS00895;product=MFS transporter;protein_id=WP_000956320.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	184527	185315	.	-	.	ID=gene-PHA55_RS00900;Name=PHA55_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS00900;old_locus_tag=PHA55_00900
NZ_CP116044.1	Protein Homology	CDS	184527	185315	.	-	0	ID=cds-WP_000022286.1;Parent=gene-PHA55_RS00900;Dbxref=Genbank:WP_000022286.1;Name=WP_000022286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000022208.1;locus_tag=PHA55_RS00900;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000022286.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	185355	186251	.	-	.	ID=gene-PHA55_RS00905;Name=PHA55_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS00905;old_locus_tag=PHA55_00905
NZ_CP116044.1	Protein Homology	CDS	185355	186251	.	-	0	ID=cds-WP_000160872.1;Parent=gene-PHA55_RS00905;Dbxref=Genbank:WP_000160872.1;Name=WP_000160872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000196715.1;locus_tag=PHA55_RS00905;product=sugar kinase;protein_id=WP_000160872.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	186424	187302	.	+	.	ID=gene-PHA55_RS00910;Name=yihU;gbkey=Gene;gene=yihU;gene_biotype=protein_coding;locus_tag=PHA55_RS00910;old_locus_tag=PHA55_00910
NZ_CP116044.1	Protein Homology	CDS	186424	187302	.	+	0	ID=cds-WP_001299483.1;Parent=gene-PHA55_RS00910;Dbxref=Genbank:WP_001299483.1;Name=WP_001299483.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yihU;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001318159.1;locus_tag=PHA55_RS00910;product=sulfolactaldehyde 3-reductase;protein_id=WP_001299483.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	187327	188214	.	+	.	ID=gene-PHA55_RS00915;Name=PHA55_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS00915;old_locus_tag=PHA55_00915
NZ_CP116044.1	Protein Homology	CDS	187327	188214	.	+	0	ID=cds-WP_000094544.1;Parent=gene-PHA55_RS00915;Dbxref=Genbank:WP_000094544.1;Name=WP_000094544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000094541.1;locus_tag=PHA55_RS00915;product=aldolase;protein_id=WP_000094544.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	188247	189257	.	+	.	ID=gene-PHA55_RS00920;Name=PHA55_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS00920;old_locus_tag=PHA55_00920
NZ_CP116044.1	Protein Homology	CDS	188247	189257	.	+	0	ID=cds-WP_000357967.1;Parent=gene-PHA55_RS00920;Dbxref=Genbank:WP_000357967.1;Name=WP_000357967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001494590.1;locus_tag=PHA55_RS00920;product=alcohol dehydrogenase catalytic domain-containing protein;protein_id=WP_000357967.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	189327	190760	.	+	.	ID=gene-PHA55_RS00925;Name=PHA55_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS00925;old_locus_tag=PHA55_00925
NZ_CP116044.1	Protein Homology	CDS	189327	190760	.	+	0	ID=cds-WP_000078438.1;Parent=gene-PHA55_RS00925;Dbxref=Genbank:WP_000078438.1;Name=WP_000078438.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016246439.1;locus_tag=PHA55_RS00925;product=MFS transporter;protein_id=WP_000078438.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	190859	192208	.	+	.	ID=gene-PHA55_RS00930;Name=PHA55_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS00930;old_locus_tag=PHA55_00930
NZ_CP116044.1	Protein Homology	CDS	190859	192208	.	+	0	ID=cds-WP_001291190.1;Parent=gene-PHA55_RS00930;Dbxref=Genbank:WP_001291190.1;Name=WP_001291190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291189.1;locus_tag=PHA55_RS00930;product=MFS transporter;protein_id=WP_001291190.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	192198	193085	.	+	.	ID=gene-PHA55_RS00935;Name=PHA55_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS00935;old_locus_tag=PHA55_00935
NZ_CP116044.1	Protein Homology	CDS	192198	193085	.	+	0	ID=cds-WP_000846261.1;Parent=gene-PHA55_RS00935;Dbxref=Genbank:WP_000846261.1;Name=WP_000846261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001309103.1;locus_tag=PHA55_RS00935;product=aldose 1-epimerase;protein_id=WP_000846261.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	193226	193825	.	+	.	ID=gene-PHA55_RS00940;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=PHA55_RS00940;old_locus_tag=PHA55_00940
NZ_CP116044.1	Protein Homology	CDS	193226	193825	.	+	0	ID=cds-WP_001295269.1;Parent=gene-PHA55_RS00940;Dbxref=Genbank:WP_001295269.1;Name=WP_001295269.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709685.2;locus_tag=PHA55_RS00940;product=glucose-1-phosphatase;protein_id=WP_001295269.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	193819	194691	.	+	.	ID=gene-PHA55_RS00945;Name=yihY;gbkey=Gene;gene=yihY;gene_biotype=protein_coding;locus_tag=PHA55_RS00945;old_locus_tag=PHA55_00945
NZ_CP116044.1	Protein Homology	CDS	193819	194691	.	+	0	ID=cds-WP_000920762.1;Parent=gene-PHA55_RS00945;Dbxref=Genbank:WP_000920762.1;Name=WP_000920762.1;gbkey=CDS;gene=yihY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312836.1;locus_tag=PHA55_RS00945;product=virulence factor BrkB family protein;protein_id=WP_000920762.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	194688	195125	.	+	.	ID=gene-PHA55_RS00950;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=PHA55_RS00950;old_locus_tag=PHA55_00950
NZ_CP116044.1	Protein Homology	CDS	194688	195125	.	+	0	ID=cds-WP_000560983.1;Parent=gene-PHA55_RS00950;Dbxref=Genbank:WP_000560983.1;Name=WP_000560983.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=PHA55_RS00950;product=D-aminoacyl-tRNA deacylase;protein_id=WP_000560983.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	195170	196111	.	+	.	ID=gene-PHA55_RS00955;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=PHA55_RS00955;old_locus_tag=PHA55_00955
NZ_CP116044.1	Protein Homology	CDS	195170	196111	.	+	0	ID=cds-WP_001297068.1;Parent=gene-PHA55_RS00955;Dbxref=Genbank:WP_001297068.1;Name=WP_001297068.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666856.1;locus_tag=PHA55_RS00955;product=fatty acid biosynthesis protein FabY;protein_id=WP_001297068.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	196175	197083	.	-	.	ID=gene-PHA55_RS00960;Name=PHA55_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS00960;old_locus_tag=PHA55_00960
NZ_CP116044.1	Protein Homology	CDS	196175	197083	.	-	0	ID=cds-WP_001162704.1;Parent=gene-PHA55_RS00960;Dbxref=Genbank:WP_001162704.1;Name=WP_001162704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001296611.1;locus_tag=PHA55_RS00960;product=alpha/beta hydrolase;protein_id=WP_001162704.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	197312	197623	.	+	.	ID=gene-PHA55_RS00965;Name=PHA55_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS00965;old_locus_tag=PHA55_00965
NZ_CP116044.1	Protein Homology	CDS	197312	197623	.	+	0	ID=cds-WP_000897305.1;Parent=gene-PHA55_RS00965;Dbxref=Genbank:WP_000897305.1;Name=WP_000897305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000897300.1;locus_tag=PHA55_RS00965;product=hypothetical protein;protein_id=WP_000897305.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	197624	197914	.	+	.	ID=gene-PHA55_RS00970;Name=nadS;gbkey=Gene;gene=nadS;gene_biotype=protein_coding;locus_tag=PHA55_RS00970;old_locus_tag=PHA55_00970
NZ_CP116044.1	Protein Homology	CDS	197624	197914	.	+	0	ID=cds-WP_000356397.1;Parent=gene-PHA55_RS00970;Dbxref=Genbank:WP_000356397.1;Name=WP_000356397.1;gbkey=CDS;gene=nadS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000356400.1;locus_tag=PHA55_RS00970;product=NadS family protein;protein_id=WP_000356397.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	198500	198718	.	+	.	ID=gene-PHA55_RS00975;Name=yiiE;gbkey=Gene;gene=yiiE;gene_biotype=protein_coding;locus_tag=PHA55_RS00975;old_locus_tag=PHA55_00975
NZ_CP116044.1	Protein Homology	CDS	198500	198718	.	+	0	ID=cds-WP_001315930.1;Parent=gene-PHA55_RS00975;Dbxref=Genbank:WP_001315930.1;Name=WP_001315930.1;gbkey=CDS;gene=yiiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312842.3;locus_tag=PHA55_RS00975;product=ribbon-helix-helix domain-containing protein;protein_id=WP_001315930.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	198938	199180	.	+	.	ID=gene-PHA55_RS00980;Name=yiiF;gbkey=Gene;gene=yiiF;gene_biotype=protein_coding;locus_tag=PHA55_RS00980;old_locus_tag=PHA55_00980
NZ_CP116044.1	Protein Homology	CDS	198938	199180	.	+	0	ID=cds-WP_001087409.1;Parent=gene-PHA55_RS00980;Dbxref=Genbank:WP_001087409.1;Name=WP_001087409.1;gbkey=CDS;gene=yiiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709694.2;locus_tag=PHA55_RS00980;product=protein YiiF;protein_id=WP_001087409.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	199510	200439	.	-	.	ID=gene-PHA55_RS00985;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=PHA55_RS00985;old_locus_tag=PHA55_00985
NZ_CP116044.1	Protein Homology	CDS	199510	200439	.	-	0	ID=cds-WP_000027708.1;Parent=gene-PHA55_RS00985;Dbxref=Genbank:WP_000027708.1;Name=WP_000027708.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=PHA55_RS00985;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_000027708.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	200436	201071	.	-	.	ID=gene-PHA55_RS00990;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=PHA55_RS00990;old_locus_tag=PHA55_00990
NZ_CP116044.1	Protein Homology	CDS	200436	201071	.	-	0	ID=cds-WP_000829013.1;Parent=gene-PHA55_RS00990;Dbxref=Genbank:WP_000829013.1;Name=WP_000829013.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312845.1;locus_tag=PHA55_RS00990;product=formate dehydrogenase cytochrome b556 subunit;protein_id=WP_000829013.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	201068	201970	.	-	.	ID=gene-PHA55_RS00995;Name=fdoH;gbkey=Gene;gene=fdoH;gene_biotype=protein_coding;locus_tag=PHA55_RS00995;old_locus_tag=PHA55_00995
NZ_CP116044.1	Protein Homology	CDS	201068	201970	.	-	0	ID=cds-WP_000331377.1;Parent=gene-PHA55_RS00995;Dbxref=Genbank:WP_000331377.1;Name=WP_000331377.1;gbkey=CDS;gene=fdoH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418329.1;locus_tag=PHA55_RS00995;product=formate dehydrogenase O subunit beta;protein_id=WP_000331377.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	201983	205033	.	-	.	ID=gene-PHA55_RS01000;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=PHA55_RS01000;old_locus_tag=PHA55_01000
NZ_CP116044.1	Protein Homology	CDS	201983	205033	.	-	0	ID=cds-WP_011310337.1;Parent=gene-PHA55_RS01000;Dbxref=Genbank:WP_011310337.1;Name=WP_011310337.1;Ontology_term=GO:0015942,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418330.1;locus_tag=PHA55_RS01000;product=formate dehydrogenase-N subunit alpha;protein_id=WP_011310337.1;transl_except=(pos:complement(204446..204448)%2Caa:Sec);transl_table=11
NZ_CP116044.1	RefSeq	gene	205227	206060	.	+	.	ID=gene-PHA55_RS01005;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=PHA55_RS01005;old_locus_tag=PHA55_01005
NZ_CP116044.1	Protein Homology	CDS	205227	206060	.	+	0	ID=cds-WP_000753589.1;Parent=gene-PHA55_RS01005;Dbxref=Genbank:WP_000753589.1;Name=WP_000753589.1;Ontology_term=GO:0009061,GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312848.1;locus_tag=PHA55_RS01005;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_000753589.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	206213	207253	.	+	.	ID=gene-PHA55_RS01010;Name=yiiG;gbkey=Gene;gene=yiiG;gene_biotype=protein_coding;locus_tag=PHA55_RS01010;old_locus_tag=PHA55_01010
NZ_CP116044.1	Protein Homology	CDS	206213	207253	.	+	0	ID=cds-WP_001317404.1;Parent=gene-PHA55_RS01010;Dbxref=Genbank:WP_001317404.1;Name=WP_001317404.1;gbkey=CDS;gene=yiiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418332.1;locus_tag=PHA55_RS01010;product=YiiG family protein;protein_id=WP_001317404.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	207303	209051	.	-	.	ID=gene-PHA55_RS01015;Name=frvR;gbkey=Gene;gene=frvR;gene_biotype=protein_coding;locus_tag=PHA55_RS01015;old_locus_tag=PHA55_01015
NZ_CP116044.1	Protein Homology	CDS	207303	209051	.	-	0	ID=cds-WP_000931302.1;Parent=gene-PHA55_RS01015;Dbxref=Genbank:WP_000931302.1;Name=WP_000931302.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=frvR;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418333.1;locus_tag=PHA55_RS01015;product=putative frv operon regulatory protein;protein_id=WP_000931302.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	209051	210121	.	-	.	ID=gene-PHA55_RS01020;Name=frvX;gbkey=Gene;gene=frvX;gene_biotype=protein_coding;locus_tag=PHA55_RS01020;old_locus_tag=PHA55_01020
NZ_CP116044.1	Protein Homology	CDS	209051	210121	.	-	0	ID=cds-WP_001019456.1;Parent=gene-PHA55_RS01020;Dbxref=Genbank:WP_001019456.1;Name=WP_001019456.1;gbkey=CDS;gene=frvX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418334.1;locus_tag=PHA55_RS01020;product=aminopeptidase;protein_id=WP_001019456.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	210111	211562	.	-	.	ID=gene-PHA55_RS01025;Name=frvB;gbkey=Gene;gene=frvB;gene_biotype=protein_coding;locus_tag=PHA55_RS01025;old_locus_tag=PHA55_01025
NZ_CP116044.1	Protein Homology	CDS	210111	211562	.	-	0	ID=cds-WP_000446023.1;Parent=gene-PHA55_RS01025;Dbxref=Genbank:WP_000446023.1;Name=WP_000446023.1;gbkey=CDS;gene=frvB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418335.4;locus_tag=PHA55_RS01025;product=PTS fructose-like transporter subunit IIBC;protein_id=WP_000446023.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	211573	212019	.	-	.	ID=gene-PHA55_RS01030;Name=frvA;gbkey=Gene;gene=frvA;gene_biotype=protein_coding;locus_tag=PHA55_RS01030;old_locus_tag=PHA55_01030
NZ_CP116044.1	Protein Homology	CDS	211573	212019	.	-	0	ID=cds-WP_000729591.1;Parent=gene-PHA55_RS01030;Dbxref=Genbank:WP_000729591.1;Name=WP_000729591.1;gbkey=CDS;gene=frvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312853.1;locus_tag=PHA55_RS01030;product=PTS fructose transporter subunit IIA;protein_id=WP_000729591.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	212332	212646	.	-	.	ID=gene-PHA55_RS01035;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=PHA55_RS01035;old_locus_tag=PHA55_01035
NZ_CP116044.1	Protein Homology	CDS	212332	212646	.	-	0	ID=cds-WP_000619503.1;Parent=gene-PHA55_RS01035;Dbxref=Genbank:WP_000619503.1;Name=WP_000619503.1;Ontology_term=GO:0019301,GO:0016857;gbkey=CDS;gene=rhaM;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418337.1;locus_tag=PHA55_RS01035;product=L-rhamnose mutarotase;protein_id=WP_000619503.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	212656	213480	.	-	.	ID=gene-PHA55_RS01040;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=PHA55_RS01040;old_locus_tag=PHA55_01040
NZ_CP116044.1	Protein Homology	CDS	212656	213480	.	-	0	ID=cds-WP_001179764.1;Parent=gene-PHA55_RS01040;Dbxref=Genbank:WP_001179764.1;Name=WP_001179764.1;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418338.1;locus_tag=PHA55_RS01040;product=rhamnulose-1-phosphate aldolase;protein_id=WP_001179764.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	213722	214981	.	-	.	ID=gene-PHA55_RS01045;Name=rhaA;gbkey=Gene;gene=rhaA;gene_biotype=protein_coding;locus_tag=PHA55_RS01045;old_locus_tag=PHA55_01045
NZ_CP116044.1	Protein Homology	CDS	213722	214981	.	-	0	ID=cds-WP_001325794.1;Parent=gene-PHA55_RS01045;Dbxref=Genbank:WP_001325794.1;Name=WP_001325794.1;Ontology_term=GO:0019301,GO:0008740;gbkey=CDS;gene=rhaA;go_function=L-rhamnose isomerase activity|0008740||IEA;go_process=rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026276.1;locus_tag=PHA55_RS01045;product=L-rhamnose isomerase;protein_id=WP_001325794.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	214978	216447	.	-	.	ID=gene-PHA55_RS01050;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=PHA55_RS01050;old_locus_tag=PHA55_01050
NZ_CP116044.1	Protein Homology	CDS	214978	216447	.	-	0	ID=cds-WP_000144118.1;Parent=gene-PHA55_RS01050;Dbxref=Genbank:WP_000144118.1;Name=WP_000144118.1;Ontology_term=GO:0005975,GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=carbohydrate metabolic process|0005975||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312858.1;locus_tag=PHA55_RS01050;product=rhamnulokinase;protein_id=WP_000144118.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	216735	217571	.	+	.	ID=gene-PHA55_RS01055;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=PHA55_RS01055;old_locus_tag=PHA55_01055
NZ_CP116044.1	Protein Homology	CDS	216735	217571	.	+	0	ID=cds-WP_000217139.1;Parent=gene-PHA55_RS01055;Dbxref=Genbank:WP_000217139.1;Name=WP_000217139.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418341.1;locus_tag=PHA55_RS01055;product=HTH-type transcriptional activator RhaS;protein_id=WP_000217139.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	217645	218493	.	+	.	ID=gene-PHA55_RS01060;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=PHA55_RS01060;old_locus_tag=PHA55_01060
NZ_CP116044.1	Protein Homology	CDS	217645	218493	.	+	0	ID=cds-WP_001298410.1;Parent=gene-PHA55_RS01060;Dbxref=Genbank:WP_001298410.1;Name=WP_001298410.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418342.2;locus_tag=PHA55_RS01060;product=HTH-type transcriptional activator RhaR;protein_id=WP_001298410.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	218490	219524	.	-	.	ID=gene-PHA55_RS01065;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=PHA55_RS01065;old_locus_tag=PHA55_01065
NZ_CP116044.1	Protein Homology	CDS	218490	219524	.	-	0	ID=cds-WP_000063489.1;Parent=gene-PHA55_RS01065;Dbxref=Genbank:WP_000063489.1;Name=WP_000063489.1;Ontology_term=GO:0008645,GO:0015153;gbkey=CDS;gene=rhaT;go_function=rhamnose transmembrane transporter activity|0015153||IEA;go_process=hexose transmembrane transport|0008645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418343.1;locus_tag=PHA55_RS01065;product=L-rhamnose/proton symporter RhaT;protein_id=WP_000063489.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	219809	220429	.	+	.	ID=gene-PHA55_RS01070;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=PHA55_RS01070;old_locus_tag=PHA55_01070
NZ_CP116044.1	Protein Homology	CDS	219809	220429	.	+	0	ID=cds-WP_001297064.1;Parent=gene-PHA55_RS01070;Dbxref=Genbank:WP_001297064.1;Name=WP_001297064.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=PHA55_RS01070;product=superoxide dismutase [Mn];protein_id=WP_001297064.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	220689	221672	.	+	.	ID=gene-PHA55_RS01075;Name=kdgT;gbkey=Gene;gene=kdgT;gene_biotype=protein_coding;locus_tag=PHA55_RS01075;old_locus_tag=PHA55_01075
NZ_CP116044.1	Protein Homology	CDS	220689	221672	.	+	0	ID=cds-WP_001166062.1;Parent=gene-PHA55_RS01075;Dbxref=Genbank:WP_001166062.1;Name=WP_001166062.1;Ontology_term=GO:0046411,GO:0015649;gbkey=CDS;gene=kdgT;go_function=2-keto-3-deoxygluconate:proton symporter activity|0015649||IEA;go_process=2-keto-3-deoxygluconate transmembrane transport|0046411||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709713.2;locus_tag=PHA55_RS01075;product=2-keto-3-deoxygluconate transporter;protein_id=WP_001166062.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	221821	222495	.	+	.	ID=gene-PHA55_RS01080;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=protein_coding;locus_tag=PHA55_RS01080;old_locus_tag=PHA55_01080
NZ_CP116044.1	Protein Homology	CDS	221821	222495	.	+	0	ID=cds-WP_001270270.1;Parent=gene-PHA55_RS01080;Dbxref=Genbank:WP_001270270.1;Name=WP_001270270.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;gene=yiiM;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709716.2;locus_tag=PHA55_RS01080;product=6-hydroxyaminopurine reductase;protein_id=WP_001270270.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	222601	223974	.	-	.	ID=gene-PHA55_RS01085;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=PHA55_RS01085;old_locus_tag=PHA55_01085
NZ_CP116044.1	Protein Homology	CDS	222601	223974	.	-	0	ID=cds-WP_000580417.1;Parent=gene-PHA55_RS01085;Dbxref=Genbank:WP_000580417.1;Name=WP_000580417.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312864.1;locus_tag=PHA55_RS01085;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_000580417.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	223971	224669	.	-	.	ID=gene-PHA55_RS01090;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=PHA55_RS01090;old_locus_tag=PHA55_01090
NZ_CP116044.1	Protein Homology	CDS	223971	224669	.	-	0	ID=cds-WP_001033722.1;Parent=gene-PHA55_RS01090;Dbxref=Genbank:WP_001033722.1;Name=WP_001033722.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=PHA55_RS01090;product=envelope stress response regulator transcription factor CpxR;protein_id=WP_001033722.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	224819	225319	.	+	.	ID=gene-PHA55_RS01095;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=PHA55_RS01095;old_locus_tag=PHA55_01095
NZ_CP116044.1	Protein Homology	CDS	224819	225319	.	+	0	ID=cds-WP_001223800.1;Parent=gene-PHA55_RS01095;Dbxref=Genbank:WP_001223800.1;Name=WP_001223800.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026277.1;locus_tag=PHA55_RS01095;product=cell-envelope stress modulator CpxP;protein_id=WP_001223800.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	225468	226370	.	+	.	ID=gene-PHA55_RS01100;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=PHA55_RS01100;old_locus_tag=PHA55_01100
NZ_CP116044.1	Protein Homology	CDS	225468	226370	.	+	0	ID=cds-WP_001076742.1;Parent=gene-PHA55_RS01100;Dbxref=Genbank:WP_001076742.1;Name=WP_001076742.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=fieF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312867.1;locus_tag=PHA55_RS01100;product=CDF family cation-efflux transporter FieF;protein_id=WP_001076742.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	226551	227513	.	+	.	ID=gene-PHA55_RS01105;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=PHA55_RS01105;old_locus_tag=PHA55_01105
NZ_CP116044.1	Protein Homology	CDS	226551	227513	.	+	0	ID=cds-WP_000591795.1;Parent=gene-PHA55_RS01105;Dbxref=Genbank:WP_000591795.1;Name=WP_000591795.1;Ontology_term=GO:0006096;gbkey=CDS;gene=pfkA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1;locus_tag=PHA55_RS01105;product=6-phosphofructokinase;protein_id=WP_000591795.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	227788	228768	.	+	.	ID=gene-PHA55_RS01110;Name=PHA55_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS01110;old_locus_tag=PHA55_01110
NZ_CP116044.1	Protein Homology	CDS	227788	228768	.	+	0	ID=cds-WP_000399648.1;Parent=gene-PHA55_RS01110;Dbxref=Genbank:WP_000399648.1;Name=WP_000399648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904434.1;locus_tag=PHA55_RS01110;product=IS110-like element IS621 family transposase;protein_id=WP_000399648.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	229111	230100	.	+	.	ID=gene-PHA55_RS01115;Name=sbp;gbkey=Gene;gene=sbp;gene_biotype=protein_coding;locus_tag=PHA55_RS01115;old_locus_tag=PHA55_01115
NZ_CP116044.1	Protein Homology	CDS	229111	230100	.	+	0	ID=cds-WP_001045687.1;Parent=gene-PHA55_RS01115;Dbxref=Genbank:WP_001045687.1;Name=WP_001045687.1;gbkey=CDS;gene=sbp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=PHA55_RS01115;product=sulfate/thiosulfate ABC transporter substrate-binding protein Sbp;protein_id=WP_001045687.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	230207	230962	.	+	.	ID=gene-PHA55_RS01120;Name=cdh;gbkey=Gene;gene=cdh;gene_biotype=protein_coding;locus_tag=PHA55_RS01120;old_locus_tag=PHA55_01120
NZ_CP116044.1	Protein Homology	CDS	230207	230962	.	+	0	ID=cds-WP_000708994.1;Parent=gene-PHA55_RS01120;Dbxref=Genbank:WP_000708994.1;Name=WP_000708994.1;Ontology_term=GO:0008654,GO:0008715;gbkey=CDS;gene=cdh;go_function=CDP-diacylglycerol diphosphatase activity|0008715||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709723.2;locus_tag=PHA55_RS01120;product=CDP-diacylglycerol diphosphatase;protein_id=WP_000708994.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	231017	231784	.	-	.	ID=gene-PHA55_RS01125;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=PHA55_RS01125;old_locus_tag=PHA55_01125
NZ_CP116044.1	Protein Homology	CDS	231017	231784	.	-	0	ID=cds-WP_001216325.1;Parent=gene-PHA55_RS01125;Dbxref=Genbank:WP_001216325.1;Name=WP_001216325.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312871.1;locus_tag=PHA55_RS01125;product=triose-phosphate isomerase;protein_id=WP_001216325.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	231892	232491	.	-	.	ID=gene-PHA55_RS01130;Name=yiiQ;gbkey=Gene;gene=yiiQ;gene_biotype=protein_coding;locus_tag=PHA55_RS01130;old_locus_tag=PHA55_01130
NZ_CP116044.1	Protein Homology	CDS	231892	232491	.	-	0	ID=cds-WP_000802226.1;Parent=gene-PHA55_RS01130;Dbxref=Genbank:WP_000802226.1;Name=WP_000802226.1;gbkey=CDS;gene=yiiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312872.1;locus_tag=PHA55_RS01130;product=YiiQ family protein;protein_id=WP_000802226.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	232592	233032	.	+	.	ID=gene-PHA55_RS01135;Name=yiiR;gbkey=Gene;gene=yiiR;gene_biotype=protein_coding;locus_tag=PHA55_RS01135;old_locus_tag=PHA55_01135
NZ_CP116044.1	Protein Homology	CDS	232592	233032	.	+	0	ID=cds-WP_000155254.1;Parent=gene-PHA55_RS01135;Dbxref=Genbank:WP_000155254.1;Name=WP_000155254.1;gbkey=CDS;gene=yiiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312873.1;locus_tag=PHA55_RS01135;product=DUF805 domain-containing protein;protein_id=WP_000155254.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	233244	233543	.	+	.	ID=gene-PHA55_RS01140;Name=yiiS;gbkey=Gene;gene=yiiS;gene_biotype=protein_coding;locus_tag=PHA55_RS01140;old_locus_tag=PHA55_01140
NZ_CP116044.1	Protein Homology	CDS	233244	233543	.	+	0	ID=cds-WP_000655986.1;Parent=gene-PHA55_RS01140;Dbxref=Genbank:WP_000655986.1;Name=WP_000655986.1;gbkey=CDS;gene=yiiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312874.1;locus_tag=PHA55_RS01140;product=DUF406 domain-containing protein;protein_id=WP_000655986.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	233570	233998	.	+	.	ID=gene-PHA55_RS01145;Name=uspD;gbkey=Gene;gene=uspD;gene_biotype=protein_coding;locus_tag=PHA55_RS01145;old_locus_tag=PHA55_01145
NZ_CP116044.1	Protein Homology	CDS	233570	233998	.	+	0	ID=cds-WP_000323556.1;Parent=gene-PHA55_RS01145;Dbxref=Genbank:WP_000323556.1;Name=WP_000323556.1;gbkey=CDS;gene=uspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418358.1;locus_tag=PHA55_RS01145;product=universal stress protein UspD;protein_id=WP_000323556.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	234003	234749	.	-	.	ID=gene-PHA55_RS01150;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=PHA55_RS01150;old_locus_tag=PHA55_01150
NZ_CP116044.1	Protein Homology	CDS	234003	234749	.	-	0	ID=cds-WP_000796320.1;Parent=gene-PHA55_RS01150;Dbxref=Genbank:WP_000796320.1;Name=WP_000796320.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709728.1;locus_tag=PHA55_RS01150;product=ferredoxin--NADP(+) reductase;protein_id=WP_000796320.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	234846	235856	.	-	.	ID=gene-PHA55_RS01155;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=PHA55_RS01155;old_locus_tag=PHA55_01155
NZ_CP116044.1	Protein Homology	CDS	234846	235856	.	-	0	ID=cds-WP_001250644.1;Parent=gene-PHA55_RS01155;Dbxref=Genbank:WP_001250644.1;Name=WP_001250644.1;Ontology_term=GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418360.1;locus_tag=PHA55_RS01155;product=class II fructose-bisphosphatase;protein_id=WP_001250644.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	235992	237500	.	-	.	ID=gene-PHA55_RS01160;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=PHA55_RS01160;old_locus_tag=PHA55_01160
NZ_CP116044.1	Protein Homology	CDS	235992	237500	.	-	0	ID=cds-WP_000136788.1;Parent=gene-PHA55_RS01160;Dbxref=Genbank:WP_000136788.1;Name=WP_000136788.1;Ontology_term=GO:0006071,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312878.1;locus_tag=PHA55_RS01160;product=glycerol kinase GlpK;protein_id=WP_000136788.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	237523	238368	.	-	.	ID=gene-PHA55_RS01165;Name=glpF;gbkey=Gene;gene=glpF;gene_biotype=protein_coding;locus_tag=PHA55_RS01165;old_locus_tag=PHA55_01165
NZ_CP116044.1	Protein Homology	CDS	237523	238368	.	-	0	ID=cds-WP_000084268.1;Parent=gene-PHA55_RS01165;Dbxref=Genbank:WP_000084268.1;Name=WP_000084268.1;gbkey=CDS;gene=glpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312879.1;locus_tag=PHA55_RS01165;product=glycerol uptake facilitator protein GlpF;protein_id=WP_000084268.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	238793	239038	.	+	.	ID=gene-PHA55_RS01170;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=PHA55_RS01170;old_locus_tag=PHA55_01170
NZ_CP116044.1	Protein Homology	CDS	238793	239038	.	+	0	ID=cds-WP_001296623.1;Parent=gene-PHA55_RS01170;Dbxref=Genbank:WP_001296623.1;Name=WP_001296623.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418363.1;locus_tag=PHA55_RS01170;product=septal ring assembly protein ZapB;protein_id=WP_001296623.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	239123	239608	.	-	.	ID=gene-PHA55_RS01175;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=PHA55_RS01175;old_locus_tag=PHA55_01175
NZ_CP116044.1	Protein Homology	CDS	239123	239608	.	-	0	ID=cds-WP_000872908.1;Parent=gene-PHA55_RS01175;Dbxref=Genbank:WP_000872908.1;Name=WP_000872908.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=PHA55_RS01175;product=ribonuclease E activity regulator RraA;protein_id=WP_000872908.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	239701	240627	.	-	.	ID=gene-PHA55_RS01180;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=PHA55_RS01180;old_locus_tag=PHA55_01180
NZ_CP116044.1	Protein Homology	CDS	239701	240627	.	-	0	ID=cds-WP_000139496.1;Parent=gene-PHA55_RS01180;Dbxref=Genbank:WP_000139496.1;Name=WP_000139496.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418365.1;locus_tag=PHA55_RS01180;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_000139496.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	240694	242025	.	-	.	ID=gene-PHA55_RS01185;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=PHA55_RS01185;old_locus_tag=PHA55_01185
NZ_CP116044.1	Protein Homology	CDS	240694	242025	.	-	0	ID=cds-WP_001293343.1;Parent=gene-PHA55_RS01185;Dbxref=Genbank:WP_001293343.1;Name=WP_001293343.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524;gbkey=CDS;gene=hslU;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=PHA55_RS01185;product=HslU--HslV peptidase ATPase subunit;protein_id=WP_001293343.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	242035	242565	.	-	.	ID=gene-PHA55_RS01190;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=PHA55_RS01190;old_locus_tag=PHA55_01190
NZ_CP116044.1	Protein Homology	CDS	242035	242565	.	-	0	ID=cds-WP_000208242.1;Parent=gene-PHA55_RS01190;Dbxref=Genbank:WP_000208242.1;Name=WP_000208242.1;Ontology_term=GO:0051603,GO:0004298;gbkey=CDS;gene=hslV;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312886.1;locus_tag=PHA55_RS01190;product=ATP-dependent protease subunit HslV;protein_id=WP_000208242.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	242658	243617	.	-	.	ID=gene-PHA55_RS01195;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=PHA55_RS01195;old_locus_tag=PHA55_01195
NZ_CP116044.1	Protein Homology	CDS	242658	243617	.	-	0	ID=cds-WP_000068834.1;Parent=gene-PHA55_RS01195;Dbxref=Genbank:WP_000068834.1;Name=WP_000068834.1;Ontology_term=GO:0042834;gbkey=CDS;gene=ftsN;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709737.1;locus_tag=PHA55_RS01195;product=cell division protein FtsN;protein_id=WP_000068834.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	243709	244734	.	-	.	ID=gene-PHA55_RS01200;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=PHA55_RS01200;old_locus_tag=PHA55_01200
NZ_CP116044.1	Protein Homology	CDS	243709	244734	.	-	0	ID=cds-WP_000644904.1;Parent=gene-PHA55_RS01200;Dbxref=Genbank:WP_000644904.1;Name=WP_000644904.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312888.1;locus_tag=PHA55_RS01200;product=DNA-binding transcriptional regulator CytR;protein_id=WP_000644904.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	244890	247088	.	-	.	ID=gene-PHA55_RS01205;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=PHA55_RS01205;old_locus_tag=PHA55_01205
NZ_CP116044.1	Protein Homology	CDS	244890	247088	.	-	0	ID=cds-WP_001348093.1;Parent=gene-PHA55_RS01205;Dbxref=Genbank:WP_001348093.1;Name=WP_001348093.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709739.2;locus_tag=PHA55_RS01205;product=primosomal protein N';protein_id=WP_001348093.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	247291	247503	.	+	.	ID=gene-PHA55_RS01210;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=PHA55_RS01210;old_locus_tag=PHA55_01210
NZ_CP116044.1	Protein Homology	CDS	247291	247503	.	+	0	ID=cds-WP_000710769.1;Parent=gene-PHA55_RS01210;Dbxref=Genbank:WP_000710769.1;Name=WP_000710769.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312890.1;locus_tag=PHA55_RS01210;product=50S ribosomal protein L31;protein_id=WP_000710769.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	247663	251847	.	+	.	ID=gene-PHA55_RS01215;Name=rhsC;gbkey=Gene;gene=rhsC;gene_biotype=protein_coding;locus_tag=PHA55_RS01215;old_locus_tag=PHA55_01215
NZ_CP116044.1	Protein Homology	CDS	247663	251847	.	+	0	ID=cds-WP_271287484.1;Parent=gene-PHA55_RS01215;Dbxref=Genbank:WP_271287484.1;Name=WP_271287484.1;gbkey=CDS;gene=rhsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312891.1;locus_tag=PHA55_RS01215;product=rhs element protein RhsC;protein_id=WP_271287484.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	251849	252172	.	+	.	ID=gene-PHA55_RS01220;Name=PHA55_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS01220;old_locus_tag=PHA55_01220
NZ_CP116044.1	Protein Homology	CDS	251849	252172	.	+	0	ID=cds-WP_001323627.1;Parent=gene-PHA55_RS01220;Dbxref=Genbank:WP_001323627.1;Name=WP_001323627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001323627.1;locus_tag=PHA55_RS01220;product=RHS element protein dsORF-f3;protein_id=WP_001323627.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	252259	252934	.	-	.	ID=gene-PHA55_RS01225;Name=PHA55_RS01225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS01225;old_locus_tag=PHA55_01225;partial=true;pseudo=true;start_range=.,252259
NZ_CP116044.1	Protein Homology	CDS	252259	252934	.	-	0	ID=cds-PHA55_RS01225;Parent=gene-PHA55_RS01225;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477181.1;locus_tag=PHA55_RS01225;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,252259;transl_table=11
NZ_CP116044.1	RefSeq	gene	253079	253687	.	-	.	ID=gene-PHA55_RS01230;Name=yiiX;gbkey=Gene;gene=yiiX;gene_biotype=protein_coding;locus_tag=PHA55_RS01230;old_locus_tag=PHA55_01230
NZ_CP116044.1	Protein Homology	CDS	253079	253687	.	-	0	ID=cds-WP_000797350.1;Parent=gene-PHA55_RS01230;Dbxref=Genbank:WP_000797350.1;Name=WP_000797350.1;gbkey=CDS;gene=yiiX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312893.1;locus_tag=PHA55_RS01230;product=YiiX family permuted papain-like enzyme;protein_id=WP_000797350.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	253871	254188	.	-	.	ID=gene-PHA55_RS01235;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=PHA55_RS01235;old_locus_tag=PHA55_01235
NZ_CP116044.1	Protein Homology	CDS	253871	254188	.	-	0	ID=cds-WP_000852812.1;Parent=gene-PHA55_RS01235;Dbxref=Genbank:WP_000852812.1;Name=WP_000852812.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=PHA55_RS01235;product=met regulon transcriptional regulator MetJ;protein_id=WP_000852812.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	254465	255625	.	+	.	ID=gene-PHA55_RS01240;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=PHA55_RS01240;old_locus_tag=PHA55_01240
NZ_CP116044.1	Protein Homology	CDS	254465	255625	.	+	0	ID=cds-WP_001297633.1;Parent=gene-PHA55_RS01240;Dbxref=Genbank:WP_001297633.1;Name=WP_001297633.1;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418374.1;locus_tag=PHA55_RS01240;product=cystathionine gamma-synthase;protein_id=WP_001297633.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	255628	258060	.	+	.	ID=gene-PHA55_RS01245;Name=metL;gbkey=Gene;gene=metL;gene_biotype=protein_coding;locus_tag=PHA55_RS01245;old_locus_tag=PHA55_01245
NZ_CP116044.1	Protein Homology	CDS	255628	258060	.	+	0	ID=cds-WP_000110772.1;Parent=gene-PHA55_RS01245;Dbxref=Genbank:WP_000110772.1;Name=WP_000110772.1;gbkey=CDS;gene=metL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=PHA55_RS01245;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=WP_000110772.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	258199	258333	.	-	.	ID=gene-PHA55_RS01250;Name=PHA55_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS01250;old_locus_tag=PHA55_01250
NZ_CP116044.1	GeneMarkS-2+	CDS	258199	258333	.	-	0	ID=cds-WP_000660586.1;Parent=gene-PHA55_RS01250;Dbxref=Genbank:WP_000660586.1;Name=WP_000660586.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA55_RS01250;product=hypothetical protein;protein_id=WP_000660586.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	258409	259299	.	+	.	ID=gene-PHA55_RS01255;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=PHA55_RS01255;old_locus_tag=PHA55_01255
NZ_CP116044.1	Protein Homology	CDS	258409	259299	.	+	0	ID=cds-WP_000007523.1;Parent=gene-PHA55_RS01255;Dbxref=Genbank:WP_000007523.1;Name=WP_000007523.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418376.1;locus_tag=PHA55_RS01255;product=methylenetetrahydrofolate reductase;protein_id=WP_000007523.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	259628	261808	.	+	.	ID=gene-PHA55_RS01260;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=PHA55_RS01260;old_locus_tag=PHA55_01260
NZ_CP116044.1	Protein Homology	CDS	259628	261808	.	+	0	ID=cds-WP_050867416.1;Parent=gene-PHA55_RS01260;Dbxref=Genbank:WP_050867416.1;Name=WP_050867416.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312898.1;locus_tag=PHA55_RS01260;product=catalase/peroxidase HPI;protein_id=WP_050867416.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	261902	262807	.	+	.	ID=gene-PHA55_RS01265;Name=yijE;gbkey=Gene;gene=yijE;gene_biotype=protein_coding;locus_tag=PHA55_RS01265;old_locus_tag=PHA55_01265
NZ_CP116044.1	Protein Homology	CDS	261902	262807	.	+	0	ID=cds-WP_001297632.1;Parent=gene-PHA55_RS01265;Dbxref=Genbank:WP_001297632.1;Name=WP_001297632.1;gbkey=CDS;gene=yijE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418378.4;locus_tag=PHA55_RS01265;product=cystine transporter YijE;protein_id=WP_001297632.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	262834	263451	.	-	.	ID=gene-PHA55_RS01270;Name=yijF;gbkey=Gene;gene=yijF;gene_biotype=protein_coding;locus_tag=PHA55_RS01270;old_locus_tag=PHA55_01270
NZ_CP116044.1	Protein Homology	CDS	262834	263451	.	-	0	ID=cds-WP_000647882.1;Parent=gene-PHA55_RS01270;Dbxref=Genbank:WP_000647882.1;Name=WP_000647882.1;gbkey=CDS;gene=yijF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312900.1;locus_tag=PHA55_RS01270;product=DUF1287 domain-containing protein;protein_id=WP_000647882.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	263726	264829	.	-	.	ID=gene-PHA55_RS01275;Name=gldA;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;locus_tag=PHA55_RS01275;old_locus_tag=PHA55_01275
NZ_CP116044.1	Protein Homology	CDS	263726	264829	.	-	0	ID=cds-WP_000374004.1;Parent=gene-PHA55_RS01275;Dbxref=Genbank:WP_000374004.1;Name=WP_000374004.1;gbkey=CDS;gene=gldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418380.4;locus_tag=PHA55_RS01275;product=bifunctional L-1%2C2-propanediol dehydrogenase/glycerol dehydrogenase;protein_id=WP_000374004.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	264840	265502	.	-	.	ID=gene-PHA55_RS01280;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=PHA55_RS01280;old_locus_tag=PHA55_01280
NZ_CP116044.1	Protein Homology	CDS	264840	265502	.	-	0	ID=cds-WP_000424837.1;Parent=gene-PHA55_RS01280;Dbxref=Genbank:WP_000424837.1;Name=WP_000424837.1;Ontology_term=GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312902.1;locus_tag=PHA55_RS01280;product=fructose-6-phosphate aldolase;protein_id=WP_000424837.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	265514	268015	.	-	.	ID=gene-PHA55_RS01285;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=PHA55_RS01285;old_locus_tag=PHA55_01285
NZ_CP116044.1	Protein Homology	CDS	265514	268015	.	-	0	ID=cds-WP_033817530.1;Parent=gene-PHA55_RS01285;Dbxref=Genbank:WP_033817530.1;Name=WP_033817530.1;Ontology_term=GO:0006808,GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=regulation of nitrogen utilization|0006808||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026278.1;locus_tag=PHA55_RS01285;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_033817530.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	268324	269403	.	+	.	ID=gene-PHA55_RS01290;Name=frwC;gbkey=Gene;gene=frwC;gene_biotype=protein_coding;locus_tag=PHA55_RS01290;old_locus_tag=PHA55_01290
NZ_CP116044.1	Protein Homology	CDS	268324	269403	.	+	0	ID=cds-WP_001004451.1;Parent=gene-PHA55_RS01290;Dbxref=Genbank:WP_001004451.1;Name=WP_001004451.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=frwC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418384.1;locus_tag=PHA55_RS01290;product=PTS fructose transporter subunit EIIC;protein_id=WP_001004451.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	269418	269738	.	+	.	ID=gene-PHA55_RS01295;Name=frwB;gbkey=Gene;gene=frwB;gene_biotype=protein_coding;locus_tag=PHA55_RS01295;old_locus_tag=PHA55_01295
NZ_CP116044.1	Protein Homology	CDS	269418	269738	.	+	0	ID=cds-WP_000161265.1;Parent=gene-PHA55_RS01295;Dbxref=Genbank:WP_000161265.1;Name=WP_000161265.1;Ontology_term=GO:0009401,GO:0022877;gbkey=CDS;gene=frwB;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312906.1;locus_tag=PHA55_RS01295;product=PTS fructose-like transporter subunit IIB;protein_id=WP_000161265.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	269789	272086	.	+	.	ID=gene-PHA55_RS01300;Name=pflD;gbkey=Gene;gene=pflD;gene_biotype=protein_coding;locus_tag=PHA55_RS01300;old_locus_tag=PHA55_01300
NZ_CP116044.1	Protein Homology	CDS	269789	272086	.	+	0	ID=cds-WP_000184821.1;Parent=gene-PHA55_RS01300;Dbxref=Genbank:WP_000184821.1;Name=WP_000184821.1;Ontology_term=GO:0003824;gbkey=CDS;gene=pflD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709751.1;locus_tag=PHA55_RS01300;product=formate C-acetyltransferase;protein_id=WP_000184821.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	272052	272930	.	+	.	ID=gene-PHA55_RS01305;Name=pflC;gbkey=Gene;gene=pflC;gene_biotype=protein_coding;locus_tag=PHA55_RS01305;old_locus_tag=PHA55_01305
NZ_CP116044.1	Protein Homology	CDS	272052	272930	.	+	0	ID=cds-WP_000204101.1;Parent=gene-PHA55_RS01305;Dbxref=Genbank:WP_000204101.1;Name=WP_000204101.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=pflC;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709752.2;locus_tag=PHA55_RS01305;product=[formate-C-acetyltransferase]-activating enzyme;protein_id=WP_000204101.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	272932	273273	.	+	.	ID=gene-PHA55_RS01310;Name=frwD;gbkey=Gene;gene=frwD;gene_biotype=protein_coding;locus_tag=PHA55_RS01310;old_locus_tag=PHA55_01310
NZ_CP116044.1	Protein Homology	CDS	272932	273273	.	+	0	ID=cds-WP_000323849.1;Parent=gene-PHA55_RS01310;Dbxref=Genbank:WP_000323849.1;Name=WP_000323849.1;gbkey=CDS;gene=frwD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709753.1;locus_tag=PHA55_RS01310;product=PTS fructose-like transporter subunit IIB;protein_id=WP_000323849.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	273260	274111	.	-	.	ID=gene-PHA55_RS01315;Name=yijO;gbkey=Gene;gene=yijO;gene_biotype=protein_coding;locus_tag=PHA55_RS01315;old_locus_tag=PHA55_01315
NZ_CP116044.1	Protein Homology	CDS	273260	274111	.	-	0	ID=cds-WP_000274636.1;Parent=gene-PHA55_RS01315;Dbxref=Genbank:WP_000274636.1;Name=WP_000274636.1;gbkey=CDS;gene=yijO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418389.1;locus_tag=PHA55_RS01315;product=AraC family transcriptional regulator;protein_id=WP_000274636.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	274260	275993	.	-	.	ID=gene-PHA55_RS01320;Name=eptC;gbkey=Gene;gene=eptC;gene_biotype=protein_coding;locus_tag=PHA55_RS01320;old_locus_tag=PHA55_01320
NZ_CP116044.1	Protein Homology	CDS	274260	275993	.	-	0	ID=cds-WP_000556293.1;Parent=gene-PHA55_RS01320;Dbxref=Genbank:WP_000556293.1;Name=WP_000556293.1;gbkey=CDS;gene=eptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418390.1;locus_tag=PHA55_RS01320;product=phosphoethanolamine transferase CptA;protein_id=WP_000556293.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	276176	278827	.	-	.	ID=gene-PHA55_RS01325;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=PHA55_RS01325;old_locus_tag=PHA55_01325
NZ_CP116044.1	Protein Homology	CDS	276176	278827	.	-	0	ID=cds-WP_001005579.1;Parent=gene-PHA55_RS01325;Dbxref=Genbank:WP_001005579.1;Name=WP_001005579.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=PHA55_RS01325;product=phosphoenolpyruvate carboxylase;protein_id=WP_001005579.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	279179	280330	.	-	.	ID=gene-PHA55_RS01330;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=PHA55_RS01330;old_locus_tag=PHA55_01330
NZ_CP116044.1	Protein Homology	CDS	279179	280330	.	-	0	ID=cds-WP_001295506.1;Parent=gene-PHA55_RS01330;Dbxref=Genbank:WP_001295506.1;Name=WP_001295506.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418392.1;locus_tag=PHA55_RS01330;product=acetylornithine deacetylase;protein_id=WP_001295506.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	280484	281488	.	+	.	ID=gene-PHA55_RS01335;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=PHA55_RS01335;old_locus_tag=PHA55_01335
NZ_CP116044.1	Protein Homology	CDS	280484	281488	.	+	0	ID=cds-WP_000935370.1;Parent=gene-PHA55_RS01335;Dbxref=Genbank:WP_000935370.1;Name=WP_000935370.1;Ontology_term=GO:0006592,GO:0003942;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=PHA55_RS01335;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_000935370.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	281496	282272	.	+	.	ID=gene-PHA55_RS01340;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=PHA55_RS01340;old_locus_tag=PHA55_01340
NZ_CP116044.1	Protein Homology	CDS	281496	282272	.	+	0	ID=cds-WP_001302318.1;Parent=gene-PHA55_RS01340;Dbxref=Genbank:WP_001302318.1;Name=WP_001302318.1;Ontology_term=GO:0006592,GO:0003991;gbkey=CDS;gene=argB;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418394.3;locus_tag=PHA55_RS01340;product=acetylglutamate kinase;protein_id=WP_001302318.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	282333	283706	.	+	.	ID=gene-PHA55_RS01345;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=PHA55_RS01345;old_locus_tag=PHA55_01345
NZ_CP116044.1	Protein Homology	CDS	282333	283706	.	+	0	ID=cds-WP_001230084.1;Parent=gene-PHA55_RS01345;Dbxref=Genbank:WP_001230084.1;Name=WP_001230084.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418395.1;locus_tag=PHA55_RS01345;product=argininosuccinate lyase;protein_id=WP_001230084.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	283972	284889	.	+	.	ID=gene-PHA55_RS01350;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=PHA55_RS01350;old_locus_tag=PHA55_01350
NZ_CP116044.1	Protein Homology	CDS	283972	284889	.	+	0	ID=cds-WP_001025939.1;Parent=gene-PHA55_RS01350;Dbxref=Genbank:WP_001025939.1;Name=WP_001025939.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831323.1;locus_tag=PHA55_RS01350;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_001025939.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	284872	286272	.	-	.	ID=gene-PHA55_RS01355;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=PHA55_RS01355;old_locus_tag=PHA55_01355
NZ_CP116044.1	Protein Homology	CDS	284872	286272	.	-	0	ID=cds-WP_001120810.1;Parent=gene-PHA55_RS01355;Dbxref=Genbank:WP_001120810.1;Name=WP_001120810.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (B-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418397.2;locus_tag=PHA55_RS01355;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_001120810.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	286603	287253	.	+	.	ID=gene-PHA55_RS01360;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=PHA55_RS01360;old_locus_tag=PHA55_01360
NZ_CP116044.1	Protein Homology	CDS	286603	287253	.	+	0	ID=cds-WP_001309117.1;Parent=gene-PHA55_RS01360;Dbxref=Genbank:WP_001309117.1;Name=WP_001309117.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460670.1;locus_tag=PHA55_RS01360;product=HTH-type transcriptional repressor FabR;protein_id=WP_001309117.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	287253	287612	.	+	.	ID=gene-PHA55_RS01365;Name=yijD;gbkey=Gene;gene=yijD;gene_biotype=protein_coding;locus_tag=PHA55_RS01365;old_locus_tag=PHA55_01365
NZ_CP116044.1	Protein Homology	CDS	287253	287612	.	+	0	ID=cds-WP_000806411.1;Parent=gene-PHA55_RS01365;Dbxref=Genbank:WP_000806411.1;Name=WP_000806411.1;gbkey=CDS;gene=yijD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312922.1;locus_tag=PHA55_RS01365;product=YijD family membrane protein;protein_id=WP_000806411.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	287652	288752	.	-	.	ID=gene-PHA55_RS01370;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=PHA55_RS01370;old_locus_tag=PHA55_01370
NZ_CP116044.1	Protein Homology	CDS	287652	288752	.	-	0	ID=cds-WP_000187022.1;Parent=gene-PHA55_RS01370;Dbxref=Genbank:WP_000187022.1;Name=WP_000187022.1;Ontology_term=GO:0006400,GO:0030697;gbkey=CDS;gene=trmA;go_function=S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity|0030697||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418400.1;locus_tag=PHA55_RS01370;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_000187022.1;transl_table=11
NZ_CP116044.1	cmsearch	riboswitch	288866	289056	.	+	.	ID=id-NZ_CP116044.1:288866..289056;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
NZ_CP116044.1	RefSeq	gene	289121	290965	.	+	.	ID=gene-PHA55_RS01375;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=PHA55_RS01375;old_locus_tag=PHA55_01375
NZ_CP116044.1	Protein Homology	CDS	289121	290965	.	+	0	ID=cds-WP_000591355.1;Parent=gene-PHA55_RS01375;Dbxref=Genbank:WP_000591355.1;Name=WP_000591355.1;Ontology_term=GO:0015889,GO:0015420;gbkey=CDS;gene=btuB;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418401.1;locus_tag=PHA55_RS01375;product=TonB-dependent vitamin B12 receptor BtuB;protein_id=WP_000591355.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	290910	291767	.	+	.	ID=gene-PHA55_RS01380;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=PHA55_RS01380;old_locus_tag=PHA55_01380
NZ_CP116044.1	Protein Homology	CDS	290910	291767	.	+	0	ID=cds-WP_000201827.1;Parent=gene-PHA55_RS01380;Dbxref=Genbank:WP_000201827.1;Name=WP_000201827.1;Ontology_term=GO:0006807,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312925.2;locus_tag=PHA55_RS01380;product=glutamate racemase;protein_id=WP_000201827.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	292141	293682	.	+	.	ID=gene-PHA55_RS01385;Name=PHA55_RS01385;gbkey=Gene;gene_biotype=rRNA;locus_tag=PHA55_RS01385;old_locus_tag=PHA55_01385
NZ_CP116044.1	cmsearch	rRNA	292141	293682	.	+	.	ID=rna-PHA55_RS01385;Parent=gene-PHA55_RS01385;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS01385;product=16S ribosomal RNA
NZ_CP116044.1	cmsearch	exon	292141	293682	.	+	.	ID=exon-PHA55_RS01385-1;Parent=rna-PHA55_RS01385;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS01385;product=16S ribosomal RNA
NZ_CP116044.1	RefSeq	gene	293768	293843	.	+	.	ID=gene-PHA55_RS01390;Name=PHA55_RS01390;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS01390;old_locus_tag=PHA55_01390
NZ_CP116044.1	tRNAscan-SE	tRNA	293768	293843	.	+	.	ID=rna-PHA55_RS01390;Parent=gene-PHA55_RS01390;anticodon=(pos:293802..293804);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS01390;product=tRNA-Glu
NZ_CP116044.1	tRNAscan-SE	exon	293768	293843	.	+	.	ID=exon-PHA55_RS01390-1;Parent=rna-PHA55_RS01390;anticodon=(pos:293802..293804);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS01390;product=tRNA-Glu
NZ_CP116044.1	RefSeq	gene	294037	296940	.	+	.	ID=gene-PHA55_RS01395;Name=PHA55_RS01395;gbkey=Gene;gene_biotype=rRNA;locus_tag=PHA55_RS01395;old_locus_tag=PHA55_01395
NZ_CP116044.1	cmsearch	rRNA	294037	296940	.	+	.	ID=rna-PHA55_RS01395;Parent=gene-PHA55_RS01395;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS01395;product=23S ribosomal RNA
NZ_CP116044.1	cmsearch	exon	294037	296940	.	+	.	ID=exon-PHA55_RS01395-1;Parent=rna-PHA55_RS01395;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS01395;product=23S ribosomal RNA
NZ_CP116044.1	RefSeq	gene	297036	297151	.	+	.	ID=gene-PHA55_RS01400;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PHA55_RS01400;old_locus_tag=PHA55_01400
NZ_CP116044.1	cmsearch	rRNA	297036	297151	.	+	.	ID=rna-PHA55_RS01400;Parent=gene-PHA55_RS01400;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS01400;product=5S ribosomal RNA
NZ_CP116044.1	cmsearch	exon	297036	297151	.	+	.	ID=exon-PHA55_RS01400-1;Parent=rna-PHA55_RS01400;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS01400;product=5S ribosomal RNA
NZ_CP116044.1	RefSeq	gene	297454	298482	.	+	.	ID=gene-PHA55_RS01405;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=PHA55_RS01405;old_locus_tag=PHA55_01405
NZ_CP116044.1	Protein Homology	CDS	297454	298482	.	+	0	ID=cds-WP_001016689.1;Parent=gene-PHA55_RS01405;Dbxref=Genbank:WP_001016689.1;Name=WP_001016689.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709772.1;locus_tag=PHA55_RS01405;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_001016689.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	298479	299444	.	+	.	ID=gene-PHA55_RS01410;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=PHA55_RS01410;old_locus_tag=PHA55_01410
NZ_CP116044.1	Protein Homology	CDS	298479	299444	.	+	0	ID=cds-WP_000654614.1;Parent=gene-PHA55_RS01410;Dbxref=Genbank:WP_000654614.1;Name=WP_000654614.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin-[acetyl-CoA-carboxylase] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312927.1;locus_tag=PHA55_RS01410;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_000654614.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	299473	300423	.	-	.	ID=gene-PHA55_RS01415;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=PHA55_RS01415;old_locus_tag=PHA55_01415
NZ_CP116044.1	Protein Homology	CDS	299473	300423	.	-	0	ID=cds-WP_000023081.1;Parent=gene-PHA55_RS01415;Dbxref=Genbank:WP_000023081.1;Name=WP_000023081.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418405.1;locus_tag=PHA55_RS01415;product=type I pantothenate kinase;protein_id=WP_000023081.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	300785	300860	.	+	.	ID=gene-PHA55_RS01420;Name=PHA55_RS01420;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS01420;old_locus_tag=PHA55_01420
NZ_CP116044.1	tRNAscan-SE	tRNA	300785	300860	.	+	.	ID=rna-PHA55_RS01420;Parent=gene-PHA55_RS01420;anticodon=(pos:300818..300820);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS01420;product=tRNA-Thr
NZ_CP116044.1	tRNAscan-SE	exon	300785	300860	.	+	.	ID=exon-PHA55_RS01420-1;Parent=rna-PHA55_RS01420;anticodon=(pos:300818..300820);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS01420;product=tRNA-Thr
NZ_CP116044.1	RefSeq	gene	300869	300953	.	+	.	ID=gene-PHA55_RS01425;Name=PHA55_RS01425;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS01425;old_locus_tag=PHA55_01425
NZ_CP116044.1	tRNAscan-SE	tRNA	300869	300953	.	+	.	ID=rna-PHA55_RS01425;Parent=gene-PHA55_RS01425;anticodon=(pos:300903..300905);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS01425;product=tRNA-Tyr
NZ_CP116044.1	tRNAscan-SE	exon	300869	300953	.	+	.	ID=exon-PHA55_RS01425-1;Parent=rna-PHA55_RS01425;anticodon=(pos:300903..300905);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS01425;product=tRNA-Tyr
NZ_CP116044.1	RefSeq	gene	301070	301144	.	+	.	ID=gene-PHA55_RS01430;Name=PHA55_RS01430;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS01430;old_locus_tag=PHA55_01430
NZ_CP116044.1	tRNAscan-SE	tRNA	301070	301144	.	+	.	ID=rna-PHA55_RS01430;Parent=gene-PHA55_RS01430;anticodon=(pos:301103..301105);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS01430;product=tRNA-Gly
NZ_CP116044.1	tRNAscan-SE	exon	301070	301144	.	+	.	ID=exon-PHA55_RS01430-1;Parent=rna-PHA55_RS01430;anticodon=(pos:301103..301105);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS01430;product=tRNA-Gly
NZ_CP116044.1	RefSeq	gene	301151	301226	.	+	.	ID=gene-PHA55_RS01435;Name=PHA55_RS01435;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS01435;old_locus_tag=PHA55_01435
NZ_CP116044.1	tRNAscan-SE	tRNA	301151	301226	.	+	.	ID=rna-PHA55_RS01435;Parent=gene-PHA55_RS01435;anticodon=(pos:301184..301186);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS01435;product=tRNA-Thr
NZ_CP116044.1	tRNAscan-SE	exon	301151	301226	.	+	.	ID=exon-PHA55_RS01435-1;Parent=rna-PHA55_RS01435;anticodon=(pos:301184..301186);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS01435;product=tRNA-Thr
NZ_CP116044.1	RefSeq	gene	301341	302525	.	+	.	ID=gene-PHA55_RS01440;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=PHA55_RS01440;old_locus_tag=PHA55_01440
NZ_CP116044.1	Protein Homology	CDS	301341	302525	.	+	0	ID=cds-WP_000031784.1;Parent=gene-PHA55_RS01440;Dbxref=Genbank:WP_000031784.1;Name=WP_000031784.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312930.1;locus_tag=PHA55_RS01440;product=elongation factor Tu;protein_id=WP_000031784.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	302755	303138	.	+	.	ID=gene-PHA55_RS01445;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=PHA55_RS01445;old_locus_tag=PHA55_01445
NZ_CP116044.1	Protein Homology	CDS	302755	303138	.	+	0	ID=cds-WP_271287485.1;Parent=gene-PHA55_RS01445;Dbxref=Genbank:WP_271287485.1;Name=WP_271287485.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=PHA55_RS01445;product=preprotein translocase subunit SecE;protein_id=WP_271287485.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	303140	303685	.	+	.	ID=gene-PHA55_RS01450;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=PHA55_RS01450;old_locus_tag=PHA55_01450
NZ_CP116044.1	Protein Homology	CDS	303140	303685	.	+	0	ID=cds-WP_001287516.1;Parent=gene-PHA55_RS01450;Dbxref=Genbank:WP_001287516.1;Name=WP_001287516.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusG;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=PHA55_RS01450;product=transcription termination/antitermination protein NusG;protein_id=WP_001287516.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	303844	304272	.	+	.	ID=gene-PHA55_RS01455;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=PHA55_RS01455;old_locus_tag=PHA55_01455
NZ_CP116044.1	Protein Homology	CDS	303844	304272	.	+	0	ID=cds-WP_001085926.1;Parent=gene-PHA55_RS01455;Dbxref=Genbank:WP_001085926.1;Name=WP_001085926.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplK;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=PHA55_RS01455;product=50S ribosomal protein L11;protein_id=WP_001085926.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	304276	304980	.	+	.	ID=gene-PHA55_RS01460;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=PHA55_RS01460;old_locus_tag=PHA55_01460
NZ_CP116044.1	Protein Homology	CDS	304276	304980	.	+	0	ID=cds-WP_001096684.1;Parent=gene-PHA55_RS01460;Dbxref=Genbank:WP_001096684.1;Name=WP_001096684.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplA;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312934.1;locus_tag=PHA55_RS01460;product=50S ribosomal protein L1;protein_id=WP_001096684.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	305393	305890	.	+	.	ID=gene-PHA55_RS01465;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=PHA55_RS01465;old_locus_tag=PHA55_01465
NZ_CP116044.1	Protein Homology	CDS	305393	305890	.	+	0	ID=cds-WP_001207201.1;Parent=gene-PHA55_RS01465;Dbxref=Genbank:WP_001207201.1;Name=WP_001207201.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=PHA55_RS01465;product=50S ribosomal protein L10;protein_id=WP_001207201.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	305957	306322	.	+	.	ID=gene-PHA55_RS01470;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=PHA55_RS01470;old_locus_tag=PHA55_01470
NZ_CP116044.1	Protein Homology	CDS	305957	306322	.	+	0	ID=cds-WP_000028878.1;Parent=gene-PHA55_RS01470;Dbxref=Genbank:WP_000028878.1;Name=WP_000028878.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplL;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=PHA55_RS01470;product=50S ribosomal protein L7/L12;protein_id=WP_000028878.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	306642	310670	.	+	.	ID=gene-PHA55_RS01475;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=PHA55_RS01475;old_locus_tag=PHA55_01475
NZ_CP116044.1	Protein Homology	CDS	306642	310670	.	+	0	ID=cds-WP_000263098.1;Parent=gene-PHA55_RS01475;Dbxref=Genbank:WP_000263098.1;Name=WP_000263098.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoB;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=PHA55_RS01475;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_000263098.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	310747	314970	.	+	.	ID=gene-PHA55_RS01480;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=PHA55_RS01480;old_locus_tag=PHA55_01480
NZ_CP116044.1	Protein Homology	CDS	310747	314970	.	+	0	ID=cds-WP_000653944.1;Parent=gene-PHA55_RS01480;Dbxref=Genbank:WP_000653944.1;Name=WP_000653944.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoC;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312938.1;locus_tag=PHA55_RS01480;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_000653944.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	315183	315722	.	+	.	ID=gene-PHA55_RS01485;Name=yjaZ;gbkey=Gene;gene=yjaZ;gene_biotype=protein_coding;locus_tag=PHA55_RS01485;old_locus_tag=PHA55_01485
NZ_CP116044.1	Protein Homology	CDS	315183	315722	.	+	0	ID=cds-WP_001307500.1;Parent=gene-PHA55_RS01485;Dbxref=Genbank:WP_001307500.1;Name=WP_001307500.1;gbkey=CDS;gene=yjaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418416.1;locus_tag=PHA55_RS01485;product=heat-shock protein C;protein_id=WP_001307500.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	316132	317265	.	-	.	ID=gene-PHA55_RS01490;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=PHA55_RS01490;old_locus_tag=PHA55_01490
NZ_CP116044.1	Protein Homology	CDS	316132	317265	.	-	0	ID=cds-WP_000847461.1;Parent=gene-PHA55_RS01490;Dbxref=Genbank:WP_000847461.1;Name=WP_000847461.1;Ontology_term=GO:0009228,GO:0016829,GO:1904047;gbkey=CDS;gene=thiH;go_function=lyase activity|0016829||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418417.1;locus_tag=PHA55_RS01490;product=2-iminoacetate synthase ThiH;protein_id=WP_000847461.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	317262	318032	.	-	.	ID=gene-PHA55_RS01495;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=PHA55_RS01495;old_locus_tag=PHA55_01495
NZ_CP116044.1	Protein Homology	CDS	317262	318032	.	-	0	ID=cds-WP_000944093.1;Parent=gene-PHA55_RS01495;Dbxref=Genbank:WP_000944093.1;Name=WP_000944093.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418418.2;locus_tag=PHA55_RS01495;product=thiazole synthase;protein_id=WP_000944093.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	318034	318234	.	-	.	ID=gene-PHA55_RS01500;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=PHA55_RS01500;old_locus_tag=PHA55_01500
NZ_CP116044.1	Protein Homology	CDS	318034	318234	.	-	0	ID=cds-WP_001166230.1;Parent=gene-PHA55_RS01500;Dbxref=Genbank:WP_001166230.1;Name=WP_001166230.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026279.1;locus_tag=PHA55_RS01500;product=sulfur carrier protein ThiS;protein_id=WP_001166230.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	318218	318973	.	-	.	ID=gene-PHA55_RS01505;Name=thiF;gbkey=Gene;gene=thiF;gene_biotype=protein_coding;locus_tag=PHA55_RS01505;old_locus_tag=PHA55_01505
NZ_CP116044.1	Protein Homology	CDS	318218	318973	.	-	0	ID=cds-WP_000999737.1;Parent=gene-PHA55_RS01505;Dbxref=Genbank:WP_000999737.1;Name=WP_000999737.1;Ontology_term=GO:0009228,GO:0016779;gbkey=CDS;gene=thiF;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418420.4;locus_tag=PHA55_RS01505;product=thiazole biosynthesis adenylyltransferase ThiF;protein_id=WP_000999737.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	318966	319601	.	-	.	ID=gene-PHA55_RS01510;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=PHA55_RS01510;old_locus_tag=PHA55_01510
NZ_CP116044.1	Protein Homology	CDS	318966	319601	.	-	0	ID=cds-WP_000284609.1;Parent=gene-PHA55_RS01510;Dbxref=Genbank:WP_000284609.1;Name=WP_000284609.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709787.2;locus_tag=PHA55_RS01510;product=thiamine phosphate synthase;protein_id=WP_000284609.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	319601	321496	.	-	.	ID=gene-PHA55_RS01515;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=PHA55_RS01515;old_locus_tag=PHA55_01515
NZ_CP116044.1	Protein Homology	CDS	319601	321496	.	-	0	ID=cds-WP_001276926.1;Parent=gene-PHA55_RS01515;Dbxref=Genbank:WP_001276926.1;Name=WP_001276926.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418422.1;locus_tag=PHA55_RS01515;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_001276926.1;transl_table=11
NZ_CP116044.1	cmsearch	riboswitch	321577	321677	.	-	.	ID=id-NZ_CP116044.1:321577..321677;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
NZ_CP116044.1	RefSeq	gene	321729	322205	.	-	.	ID=gene-PHA55_RS01520;Name=rsd;gbkey=Gene;gene=rsd;gene_biotype=protein_coding;locus_tag=PHA55_RS01520;old_locus_tag=PHA55_01520
NZ_CP116044.1	Protein Homology	CDS	321729	322205	.	-	0	ID=cds-WP_000934302.1;Parent=gene-PHA55_RS01520;Dbxref=Genbank:WP_000934302.1;Name=WP_000934302.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rsd;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312945.1;locus_tag=PHA55_RS01520;product=sigma D regulator;protein_id=WP_000934302.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	322300	323073	.	+	.	ID=gene-PHA55_RS01525;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=PHA55_RS01525;old_locus_tag=PHA55_01525
NZ_CP116044.1	Protein Homology	CDS	322300	323073	.	+	0	ID=cds-WP_000373940.1;Parent=gene-PHA55_RS01525;Dbxref=Genbank:WP_000373940.1;Name=WP_000373940.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026280.1;locus_tag=PHA55_RS01525;product=NAD(+) diphosphatase;protein_id=WP_000373940.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	323113	324177	.	+	.	ID=gene-PHA55_RS01530;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=PHA55_RS01530;old_locus_tag=PHA55_01530
NZ_CP116044.1	Protein Homology	CDS	323113	324177	.	+	0	ID=cds-WP_000137662.1;Parent=gene-PHA55_RS01530;Dbxref=Genbank:WP_000137662.1;Name=WP_000137662.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418425.1;locus_tag=PHA55_RS01530;product=uroporphyrinogen decarboxylase;protein_id=WP_000137662.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	324187	324858	.	+	.	ID=gene-PHA55_RS01535;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=PHA55_RS01535;old_locus_tag=PHA55_01535
NZ_CP116044.1	Protein Homology	CDS	324187	324858	.	+	0	ID=cds-WP_000362388.1;Parent=gene-PHA55_RS01535;Dbxref=Genbank:WP_000362388.1;Name=WP_000362388.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312948.1;locus_tag=PHA55_RS01535;product=deoxyribonuclease V;protein_id=WP_000362388.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	324901	325491	.	+	.	ID=gene-PHA55_RS01540;Name=yjaG;gbkey=Gene;gene=yjaG;gene_biotype=protein_coding;locus_tag=PHA55_RS01540;old_locus_tag=PHA55_01540
NZ_CP116044.1	Protein Homology	CDS	324901	325491	.	+	0	ID=cds-WP_000940105.1;Parent=gene-PHA55_RS01540;Dbxref=Genbank:WP_000940105.1;Name=WP_000940105.1;gbkey=CDS;gene=yjaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418427.1;locus_tag=PHA55_RS01540;product=YjaG family protein;protein_id=WP_000940105.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	325678	325950	.	+	.	ID=gene-PHA55_RS01545;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=PHA55_RS01545;old_locus_tag=PHA55_01545
NZ_CP116044.1	Protein Homology	CDS	325678	325950	.	+	0	ID=cds-WP_001044513.1;Parent=gene-PHA55_RS01545;Dbxref=Genbank:WP_001044513.1;Name=WP_001044513.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=PHA55_RS01545;product=DNA-binding protein HU-alpha;protein_id=WP_001044513.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	325963	326658	.	+	.	ID=gene-PHA55_RS01550;Name=yjaH;gbkey=Gene;gene=yjaH;gene_biotype=protein_coding;locus_tag=PHA55_RS01550;old_locus_tag=PHA55_01550
NZ_CP116044.1	Protein Homology	CDS	325963	326658	.	+	0	ID=cds-WP_001377723.1;Parent=gene-PHA55_RS01550;Dbxref=Genbank:WP_001377723.1;Name=WP_001377723.1;gbkey=CDS;gene=yjaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709795.2;locus_tag=PHA55_RS01550;product=DUF1481 domain-containing protein;protein_id=WP_001377723.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	326660	327085	.	-	.	ID=gene-PHA55_RS01555;Name=zraP;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;locus_tag=PHA55_RS01555;old_locus_tag=PHA55_01555
NZ_CP116044.1	Protein Homology	CDS	326660	327085	.	-	0	ID=cds-WP_000828222.1;Parent=gene-PHA55_RS01555;Dbxref=Genbank:WP_000828222.1;Name=WP_000828222.1;gbkey=CDS;gene=zraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312952.2;locus_tag=PHA55_RS01555;product=zinc resistance sensor/chaperone ZraP;protein_id=WP_000828222.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	327323	328699	.	+	.	ID=gene-PHA55_RS01560;Name=zraS;gbkey=Gene;gene=zraS;gene_biotype=protein_coding;locus_tag=PHA55_RS01560;old_locus_tag=PHA55_01560
NZ_CP116044.1	Protein Homology	CDS	327323	328699	.	+	0	ID=cds-WP_001211921.1;Parent=gene-PHA55_RS01560;Dbxref=Genbank:WP_001211921.1;Name=WP_001211921.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=zraS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709797.1;locus_tag=PHA55_RS01560;product=two-component system sensor histidine kinase ZraS;protein_id=WP_001211921.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	328696	330021	.	+	.	ID=gene-PHA55_RS01565;Name=zraR;gbkey=Gene;gene=zraR;gene_biotype=protein_coding;locus_tag=PHA55_RS01565;old_locus_tag=PHA55_01565
NZ_CP116044.1	Protein Homology	CDS	328696	330021	.	+	0	ID=cds-WP_000148529.1;Parent=gene-PHA55_RS01565;Dbxref=Genbank:WP_000148529.1;Name=WP_000148529.1;Ontology_term=GO:0000160,GO:0006355,GO:0043565;gbkey=CDS;gene=zraR;go_function=sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418432.1;locus_tag=PHA55_RS01565;product=sigma-54-dependent response regulator transcription factor ZraR;protein_id=WP_000148529.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	330018	331307	.	-	.	ID=gene-PHA55_RS01570;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=PHA55_RS01570;old_locus_tag=PHA55_01570
NZ_CP116044.1	Protein Homology	CDS	330018	331307	.	-	0	ID=cds-WP_000866807.1;Parent=gene-PHA55_RS01570;Dbxref=Genbank:WP_000866807.1;Name=WP_000866807.1;Ontology_term=GO:0006189,GO:0009152,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418433.1;locus_tag=PHA55_RS01570;product=phosphoribosylamine--glycine ligase;protein_id=WP_000866807.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	331319	332908	.	-	.	ID=gene-PHA55_RS01575;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=PHA55_RS01575;old_locus_tag=PHA55_01575
NZ_CP116044.1	Protein Homology	CDS	331319	332908	.	-	0	ID=cds-WP_001187566.1;Parent=gene-PHA55_RS01575;Dbxref=Genbank:WP_001187566.1;Name=WP_001187566.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=PHA55_RS01575;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_001187566.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	333523	335064	.	+	.	ID=gene-PHA55_RS01580;Name=PHA55_RS01580;gbkey=Gene;gene_biotype=rRNA;locus_tag=PHA55_RS01580;old_locus_tag=PHA55_01580
NZ_CP116044.1	cmsearch	rRNA	333523	335064	.	+	.	ID=rna-PHA55_RS01580;Parent=gene-PHA55_RS01580;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS01580;product=16S ribosomal RNA
NZ_CP116044.1	cmsearch	exon	333523	335064	.	+	.	ID=exon-PHA55_RS01580-1;Parent=rna-PHA55_RS01580;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS01580;product=16S ribosomal RNA
NZ_CP116044.1	RefSeq	gene	335150	335225	.	+	.	ID=gene-PHA55_RS01585;Name=PHA55_RS01585;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS01585;old_locus_tag=PHA55_01585
NZ_CP116044.1	tRNAscan-SE	tRNA	335150	335225	.	+	.	ID=rna-PHA55_RS01585;Parent=gene-PHA55_RS01585;anticodon=(pos:335184..335186);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS01585;product=tRNA-Glu
NZ_CP116044.1	tRNAscan-SE	exon	335150	335225	.	+	.	ID=exon-PHA55_RS01585-1;Parent=rna-PHA55_RS01585;anticodon=(pos:335184..335186);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS01585;product=tRNA-Glu
NZ_CP116044.1	RefSeq	gene	335419	338322	.	+	.	ID=gene-PHA55_RS01590;Name=PHA55_RS01590;gbkey=Gene;gene_biotype=rRNA;locus_tag=PHA55_RS01590;old_locus_tag=PHA55_01590
NZ_CP116044.1	cmsearch	rRNA	335419	338322	.	+	.	ID=rna-PHA55_RS01590;Parent=gene-PHA55_RS01590;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS01590;product=23S ribosomal RNA
NZ_CP116044.1	cmsearch	exon	335419	338322	.	+	.	ID=exon-PHA55_RS01590-1;Parent=rna-PHA55_RS01590;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS01590;product=23S ribosomal RNA
NZ_CP116044.1	RefSeq	gene	338418	338533	.	+	.	ID=gene-PHA55_RS01595;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PHA55_RS01595;old_locus_tag=PHA55_01595
NZ_CP116044.1	cmsearch	rRNA	338418	338533	.	+	.	ID=rna-PHA55_RS01595;Parent=gene-PHA55_RS01595;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS01595;product=5S ribosomal RNA
NZ_CP116044.1	cmsearch	exon	338418	338533	.	+	.	ID=exon-PHA55_RS01595-1;Parent=rna-PHA55_RS01595;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS01595;product=5S ribosomal RNA
NZ_CP116044.1	RefSeq	gene	338648	339091	.	-	.	ID=gene-PHA55_RS01600;Name=yjaB;gbkey=Gene;gene=yjaB;gene_biotype=protein_coding;locus_tag=PHA55_RS01600;old_locus_tag=PHA55_01600
NZ_CP116044.1	Protein Homology	CDS	338648	339091	.	-	0	ID=cds-WP_000236960.1;Parent=gene-PHA55_RS01600;Dbxref=Genbank:WP_000236960.1;Name=WP_000236960.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yjaB;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312957.1;locus_tag=PHA55_RS01600;product=acetyltransferase;protein_id=WP_000236960.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	339248	340177	.	+	.	ID=gene-PHA55_RS01605;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=PHA55_RS01605;old_locus_tag=PHA55_01605
NZ_CP116044.1	Protein Homology	CDS	339248	340177	.	+	0	ID=cds-WP_001122789.1;Parent=gene-PHA55_RS01605;Dbxref=Genbank:WP_001122789.1;Name=WP_001122789.1;Ontology_term=GO:0009086,GO:0008899;gbkey=CDS;gene=metA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=PHA55_RS01605;product=homoserine O-succinyltransferase;protein_id=WP_001122789.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	340446	342047	.	+	.	ID=gene-PHA55_RS01610;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=PHA55_RS01610;old_locus_tag=PHA55_01610
NZ_CP116044.1	Protein Homology	CDS	340446	342047	.	+	0	ID=cds-WP_000138880.1;Parent=gene-PHA55_RS01610;Dbxref=Genbank:WP_000138880.1;Name=WP_000138880.1;Ontology_term=GO:0006099,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312959.1;locus_tag=PHA55_RS01610;product=malate synthase A;protein_id=WP_000138880.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	342077	343381	.	+	.	ID=gene-PHA55_RS01615;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=PHA55_RS01615;old_locus_tag=PHA55_01615
NZ_CP116044.1	Protein Homology	CDS	342077	343381	.	+	0	ID=cds-WP_000857856.1;Parent=gene-PHA55_RS01615;Dbxref=Genbank:WP_000857856.1;Name=WP_000857856.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418439.1;locus_tag=PHA55_RS01615;product=isocitrate lyase;protein_id=WP_000857856.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	343662	345398	.	+	.	ID=gene-PHA55_RS01620;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=PHA55_RS01620;old_locus_tag=PHA55_01620
NZ_CP116044.1	Protein Homology	CDS	343662	345398	.	+	0	ID=cds-WP_001137214.1;Parent=gene-PHA55_RS01620;Dbxref=Genbank:WP_001137214.1;Name=WP_001137214.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418440.1;locus_tag=PHA55_RS01620;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_001137214.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	345367	346941	.	-	.	ID=gene-PHA55_RS01625;Name=PHA55_RS01625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS01625;old_locus_tag=PHA55_01625;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	345367	346941	.	-	0	ID=cds-PHA55_RS01625;Parent=gene-PHA55_RS01625;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418441.1;locus_tag=PHA55_RS01625;product=ShET2/EspL2 family type III secretion system effector toxin;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	347258	348082	.	-	.	ID=gene-PHA55_RS01630;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=PHA55_RS01630;old_locus_tag=PHA55_01630
NZ_CP116044.1	Protein Homology	CDS	347258	348082	.	-	0	ID=cds-WP_000226403.1;Parent=gene-PHA55_RS01630;Dbxref=Genbank:WP_000226403.1;Name=WP_000226403.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=iclR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418442.2;locus_tag=PHA55_RS01630;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=WP_000226403.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	348282	351965	.	+	.	ID=gene-PHA55_RS01635;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=PHA55_RS01635;old_locus_tag=PHA55_01635
NZ_CP116044.1	Protein Homology	CDS	348282	351965	.	+	0	ID=cds-WP_000096011.1;Parent=gene-PHA55_RS01635;Dbxref=Genbank:WP_000096011.1;Name=WP_000096011.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418443.1;locus_tag=PHA55_RS01635;product=methionine synthase;protein_id=WP_000096011.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	352185	353816	.	+	.	ID=gene-PHA55_RS01640;Name=yjbB;gbkey=Gene;gene=yjbB;gene_biotype=protein_coding;locus_tag=PHA55_RS01640;old_locus_tag=PHA55_01640
NZ_CP116044.1	Protein Homology	CDS	352185	353816	.	+	0	ID=cds-WP_271287486.1;Parent=gene-PHA55_RS01640;Dbxref=Genbank:WP_271287486.1;Name=WP_271287486.1;gbkey=CDS;gene=yjbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418444.1;locus_tag=PHA55_RS01640;product=Na/Pi cotransporter family protein;protein_id=WP_271287486.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	353907	354596	.	-	.	ID=gene-PHA55_RS01645;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=PHA55_RS01645;old_locus_tag=PHA55_01645
NZ_CP116044.1	Protein Homology	CDS	353907	354596	.	-	0	ID=cds-WP_000421763.1;Parent=gene-PHA55_RS01645;Dbxref=Genbank:WP_000421763.1;Name=WP_000421763.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=pepE;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312966.1;locus_tag=PHA55_RS01645;product=dipeptidase PepE;protein_id=WP_000421763.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	354808	355680	.	+	.	ID=gene-PHA55_RS01650;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=PHA55_RS01650;old_locus_tag=PHA55_01650
NZ_CP116044.1	Protein Homology	CDS	354808	355680	.	+	0	ID=cds-WP_000936350.1;Parent=gene-PHA55_RS01650;Dbxref=Genbank:WP_000936350.1;Name=WP_000936350.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709813.1;locus_tag=PHA55_RS01650;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WP_000936350.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	355681	355953	.	-	.	ID=gene-PHA55_RS01655;Name=yjbD;gbkey=Gene;gene=yjbD;gene_biotype=protein_coding;locus_tag=PHA55_RS01655;old_locus_tag=PHA55_01655
NZ_CP116044.1	Protein Homology	CDS	355681	355953	.	-	0	ID=cds-WP_001207638.1;Parent=gene-PHA55_RS01655;Dbxref=Genbank:WP_001207638.1;Name=WP_001207638.1;gbkey=CDS;gene=yjbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313033.1;locus_tag=PHA55_RS01655;product=DUF3811 domain-containing protein;protein_id=WP_001207638.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	356483	357610	.	+	.	ID=gene-PHA55_RS01660;Name=PHA55_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS01660;old_locus_tag=PHA55_01660
NZ_CP116044.1	Protein Homology	CDS	356483	357610	.	+	0	ID=cds-WP_000592029.1;Parent=gene-PHA55_RS01660;Dbxref=Genbank:WP_000592029.1;Name=WP_000592029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000592028.1;locus_tag=PHA55_RS01660;product=slipin family protein;protein_id=WP_000592029.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	357616	358407	.	+	.	ID=gene-PHA55_RS01665;Name=PHA55_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS01665;old_locus_tag=PHA55_01665
NZ_CP116044.1	Protein Homology	CDS	357616	358407	.	+	0	ID=cds-WP_001130538.1;Parent=gene-PHA55_RS01665;Dbxref=Genbank:WP_001130538.1;Name=WP_001130538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001130549.1;locus_tag=PHA55_RS01665;product=nucleotidyltransferase domain-containing protein;protein_id=WP_001130538.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	358443	359369	.	-	.	ID=gene-PHA55_RS01670;Name=PHA55_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS01670;old_locus_tag=PHA55_01670
NZ_CP116044.1	Protein Homology	CDS	358443	359369	.	-	0	ID=cds-WP_000212693.1;Parent=gene-PHA55_RS01670;Dbxref=Genbank:WP_000212693.1;Name=WP_000212693.1;Ontology_term=GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666873.1;locus_tag=PHA55_RS01670;product=zeta toxin family protein;protein_id=WP_000212693.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	359514	360863	.	-	.	ID=gene-PHA55_RS01675;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=PHA55_RS01675;old_locus_tag=PHA55_01675
NZ_CP116044.1	Protein Homology	CDS	359514	360863	.	-	0	ID=cds-WP_271287487.1;Parent=gene-PHA55_RS01675;Dbxref=Genbank:WP_271287487.1;Name=WP_271287487.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313034.1;locus_tag=PHA55_RS01675;product=lysine-sensitive aspartokinase 3;protein_id=WP_271287487.1;transl_table=11
NZ_CP116044.1	cmsearch	riboswitch	360955	361151	.	-	.	ID=id-NZ_CP116044.1:360955..361151;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
NZ_CP116044.1	RefSeq	gene	361388	363037	.	+	.	ID=gene-PHA55_RS01680;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=PHA55_RS01680;old_locus_tag=PHA55_01680
NZ_CP116044.1	Protein Homology	CDS	361388	363037	.	+	0	ID=cds-WP_000789986.1;Parent=gene-PHA55_RS01680;Dbxref=Genbank:WP_000789986.1;Name=WP_000789986.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313035.1;locus_tag=PHA55_RS01680;product=glucose-6-phosphate isomerase;protein_id=WP_000789986.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	363392	363634	.	+	.	ID=gene-PHA55_RS01685;Name=yjbE;gbkey=Gene;gene=yjbE;gene_biotype=protein_coding;locus_tag=PHA55_RS01685;old_locus_tag=PHA55_01685
NZ_CP116044.1	Protein Homology	CDS	363392	363634	.	+	0	ID=cds-WP_000757333.1;Parent=gene-PHA55_RS01685;Dbxref=Genbank:WP_000757333.1;Name=WP_000757333.1;gbkey=CDS;gene=yjbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313036.1;locus_tag=PHA55_RS01685;product=exopolysaccharide production protein YjbE;protein_id=WP_000757333.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	363748	364386	.	+	.	ID=gene-PHA55_RS01690;Name=yjbF;gbkey=Gene;gene=yjbF;gene_biotype=protein_coding;locus_tag=PHA55_RS01690;old_locus_tag=PHA55_01690
NZ_CP116044.1	Protein Homology	CDS	363748	364386	.	+	0	ID=cds-WP_001296632.1;Parent=gene-PHA55_RS01690;Dbxref=Genbank:WP_001296632.1;Name=WP_001296632.1;gbkey=CDS;gene=yjbF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418451.4;locus_tag=PHA55_RS01690;product=YjbF family lipoprotein;protein_id=WP_001296632.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	364383	365120	.	+	.	ID=gene-PHA55_RS01695;Name=yjbG;gbkey=Gene;gene=yjbG;gene_biotype=protein_coding;locus_tag=PHA55_RS01695;old_locus_tag=PHA55_01695
NZ_CP116044.1	Protein Homology	CDS	364383	365120	.	+	0	ID=cds-WP_000595552.1;Parent=gene-PHA55_RS01695;Dbxref=Genbank:WP_000595552.1;Name=WP_000595552.1;gbkey=CDS;gene=yjbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418452.1;locus_tag=PHA55_RS01695;product=capsule biosynthesis GfcC family protein;protein_id=WP_000595552.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	365120	367216	.	+	.	ID=gene-PHA55_RS01700;Name=yjbH;gbkey=Gene;gene=yjbH;gene_biotype=protein_coding;locus_tag=PHA55_RS01700;old_locus_tag=PHA55_01700
NZ_CP116044.1	Protein Homology	CDS	365120	367216	.	+	0	ID=cds-WP_001676846.1;Parent=gene-PHA55_RS01700;Dbxref=Genbank:WP_001676846.1;Name=WP_001676846.1;gbkey=CDS;gene=yjbH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418453.1;locus_tag=PHA55_RS01700;product=YjbH domain-containing protein;protein_id=WP_001676846.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	367263	367541	.	-	.	ID=gene-PHA55_RS01705;Name=PHA55_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS01705;old_locus_tag=PHA55_01705
NZ_CP116044.1	Protein Homology	CDS	367263	367541	.	-	0	ID=cds-WP_001295279.1;Parent=gene-PHA55_RS01705;Dbxref=Genbank:WP_001295279.1;Name=WP_001295279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165332.1;locus_tag=PHA55_RS01705;product=periplasmic protein;protein_id=WP_001295279.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	367557	367685	.	+	.	ID=gene-PHA55_RS01710;Name=PHA55_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS01710;old_locus_tag=PHA55_01710
NZ_CP116044.1	GeneMarkS-2+	CDS	367557	367685	.	+	0	ID=cds-WP_001298876.1;Parent=gene-PHA55_RS01710;Dbxref=Genbank:WP_001298876.1;Name=WP_001298876.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA55_RS01710;product=hypothetical protein;protein_id=WP_001298876.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	367811	368221	.	+	.	ID=gene-PHA55_RS01715;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=PHA55_RS01715;old_locus_tag=PHA55_01715
NZ_CP116044.1	Protein Homology	CDS	367811	368221	.	+	0	ID=cds-WP_000202902.1;Parent=gene-PHA55_RS01715;Dbxref=Genbank:WP_000202902.1;Name=WP_000202902.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418454.1;locus_tag=PHA55_RS01715;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_000202902.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	368265	369740	.	-	.	ID=gene-PHA55_RS01720;Name=xylE;gbkey=Gene;gene=xylE;gene_biotype=protein_coding;locus_tag=PHA55_RS01720;old_locus_tag=PHA55_01720
NZ_CP116044.1	Protein Homology	CDS	368265	369740	.	-	0	ID=cds-WP_260589871.1;Parent=gene-PHA55_RS01720;Dbxref=Genbank:WP_260589871.1;Name=WP_260589871.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=xylE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313041.1;locus_tag=PHA55_RS01720;product=D-xylose transporter XylE;protein_id=WP_260589871.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	370112	371002	.	-	.	ID=gene-PHA55_RS01725;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=PHA55_RS01725;old_locus_tag=PHA55_01725
NZ_CP116044.1	Protein Homology	CDS	370112	371002	.	-	0	ID=cds-WP_001252058.1;Parent=gene-PHA55_RS01725;Dbxref=Genbank:WP_001252058.1;Name=WP_001252058.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001252048.1;locus_tag=PHA55_RS01725;product=maltose ABC transporter permease MalG;protein_id=WP_001252058.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	371017	372561	.	-	.	ID=gene-PHA55_RS01730;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=PHA55_RS01730;old_locus_tag=PHA55_01730
NZ_CP116044.1	Protein Homology	CDS	371017	372561	.	-	0	ID=cds-WP_001297290.1;Parent=gene-PHA55_RS01730;Dbxref=Genbank:WP_001297290.1;Name=WP_001297290.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418457.1;locus_tag=PHA55_RS01730;product=maltose ABC transporter permease MalF;protein_id=WP_001297290.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	372715	373905	.	-	.	ID=gene-PHA55_RS01735;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=PHA55_RS01735;old_locus_tag=PHA55_01735
NZ_CP116044.1	Protein Homology	CDS	372715	373905	.	-	0	ID=cds-WP_000695387.1;Parent=gene-PHA55_RS01735;Dbxref=Genbank:WP_000695387.1;Name=WP_000695387.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695396.1;locus_tag=PHA55_RS01735;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WP_000695387.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	374270	375385	.	+	.	ID=gene-PHA55_RS01740;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=PHA55_RS01740;old_locus_tag=PHA55_01740
NZ_CP116044.1	Protein Homology	CDS	374270	375385	.	+	0	ID=cds-WP_000179165.1;Parent=gene-PHA55_RS01740;Dbxref=Genbank:WP_000179165.1;Name=WP_000179165.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=PHA55_RS01740;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WP_000179165.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	375457	376797	.	+	.	ID=gene-PHA55_RS01745;Name=lamB;gbkey=Gene;gene=lamB;gene_biotype=protein_coding;locus_tag=PHA55_RS01745;old_locus_tag=PHA55_01745
NZ_CP116044.1	Protein Homology	CDS	375457	376797	.	+	0	ID=cds-WP_000973658.1;Parent=gene-PHA55_RS01745;Dbxref=Genbank:WP_000973658.1;Name=WP_000973658.1;gbkey=CDS;gene=lamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313046.1;locus_tag=PHA55_RS01745;product=maltoporin LamB;protein_id=WP_000973658.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	377040	377960	.	+	.	ID=gene-PHA55_RS01750;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=PHA55_RS01750;old_locus_tag=PHA55_01750
NZ_CP116044.1	Protein Homology	CDS	377040	377960	.	+	0	ID=cds-WP_000783444.1;Parent=gene-PHA55_RS01750;Dbxref=Genbank:WP_000783444.1;Name=WP_000783444.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313047.1;locus_tag=PHA55_RS01750;product=maltose operon protein MalM;protein_id=WP_000783444.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	378189	379769	.	+	.	ID=gene-PHA55_RS01755;Name=PHA55_RS01755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS01755;old_locus_tag=PHA55_01755;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	378189	379769	.	+	0	ID=cds-PHA55_RS01755;Parent=gene-PHA55_RS01755;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579104.1;locus_tag=PHA55_RS01755;product=SopA family protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	379992	380489	.	+	.	ID=gene-PHA55_RS01760;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=PHA55_RS01760;old_locus_tag=PHA55_01760
NZ_CP116044.1	Protein Homology	CDS	379992	380489	.	+	0	ID=cds-WP_001297295.1;Parent=gene-PHA55_RS01760;Dbxref=Genbank:WP_001297295.1;Name=WP_001297295.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709881.2;locus_tag=PHA55_RS01760;product=chorismate lyase;protein_id=WP_001297295.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	380502	381374	.	+	.	ID=gene-PHA55_RS01765;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=PHA55_RS01765;old_locus_tag=PHA55_01765
NZ_CP116044.1	Protein Homology	CDS	380502	381374	.	+	0	ID=cds-WP_000455228.1;Parent=gene-PHA55_RS01765;Dbxref=Genbank:WP_000455228.1;Name=WP_000455228.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate octaprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313050.1;locus_tag=PHA55_RS01765;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_000455228.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	381529	383952	.	-	.	ID=gene-PHA55_RS01770;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=PHA55_RS01770;old_locus_tag=PHA55_01770
NZ_CP116044.1	Protein Homology	CDS	381529	383952	.	-	0	ID=cds-WP_000017354.1;Parent=gene-PHA55_RS01770;Dbxref=Genbank:WP_000017354.1;Name=WP_000017354.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418465.4;locus_tag=PHA55_RS01770;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_000017354.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	384123	384491	.	+	.	ID=gene-PHA55_RS01775;Name=dgkA;gbkey=Gene;gene=dgkA;gene_biotype=protein_coding;locus_tag=PHA55_RS01775;old_locus_tag=PHA55_01775
NZ_CP116044.1	Protein Homology	CDS	384123	384491	.	+	0	ID=cds-WP_000002907.1;Parent=gene-PHA55_RS01775;Dbxref=Genbank:WP_000002907.1;Name=WP_000002907.1;gbkey=CDS;gene=dgkA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313052.1;locus_tag=PHA55_RS01775;product=diacylglycerol kinase;protein_id=WP_000002907.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	384601	385209	.	+	.	ID=gene-PHA55_RS01780;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=PHA55_RS01780;old_locus_tag=PHA55_01780
NZ_CP116044.1	Protein Homology	CDS	384601	385209	.	+	0	ID=cds-WP_000646078.1;Parent=gene-PHA55_RS01780;Dbxref=Genbank:WP_000646078.1;Name=WP_000646078.1;Ontology_term=GO:0006282,GO:0006355,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=regulation of DNA repair|0006282||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=PHA55_RS01780;product=transcriptional repressor LexA;protein_id=WP_000646078.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	385282	386607	.	+	.	ID=gene-PHA55_RS01785;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=PHA55_RS01785;old_locus_tag=PHA55_01785
NZ_CP116044.1	Protein Homology	CDS	385282	386607	.	+	0	ID=cds-WP_001301116.1;Parent=gene-PHA55_RS01785;Dbxref=Genbank:WP_001301116.1;Name=WP_001301116.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313054.4;locus_tag=PHA55_RS01785;product=MATE family efflux transporter DinF;protein_id=WP_001301116.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	386723	386932	.	+	.	ID=gene-PHA55_RS01790;Name=yjbJ;gbkey=Gene;gene=yjbJ;gene_biotype=protein_coding;locus_tag=PHA55_RS01790;old_locus_tag=PHA55_01790
NZ_CP116044.1	Protein Homology	CDS	386723	386932	.	+	0	ID=cds-WP_001030593.1;Parent=gene-PHA55_RS01790;Dbxref=Genbank:WP_001030593.1;Name=WP_001030593.1;gbkey=CDS;gene=yjbJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313055.1;locus_tag=PHA55_RS01790;product=CsbD family protein;protein_id=WP_001030593.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	386974	387489	.	-	.	ID=gene-PHA55_RS01795;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=PHA55_RS01795;old_locus_tag=PHA55_01795
NZ_CP116044.1	Protein Homology	CDS	386974	387489	.	-	0	ID=cds-WP_001295691.1;Parent=gene-PHA55_RS01795;Dbxref=Genbank:WP_001295691.1;Name=WP_001295691.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418470.4;locus_tag=PHA55_RS01795;product=zinc uptake transcriptional repressor Zur;protein_id=WP_001295691.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	387807	388088	.	+	.	ID=gene-PHA55_RS01800;Name=PHA55_RS01800;end_range=388088,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS01800;old_locus_tag=PHA55_01800;partial=true;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	387807	388088	.	+	0	ID=cds-PHA55_RS01800;Parent=gene-PHA55_RS01800;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=388088,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418471.1;locus_tag=PHA55_RS01800;partial=true;product=DUF2713 domain-containing protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	388116	388823	.	+	.	ID=gene-PHA55_RS01805;Name=yjbM;gbkey=Gene;gene=yjbM;gene_biotype=protein_coding;locus_tag=PHA55_RS01805;old_locus_tag=PHA55_01805
NZ_CP116044.1	Protein Homology	CDS	388116	388823	.	+	0	ID=cds-WP_015364382.1;Parent=gene-PHA55_RS01805;Dbxref=Genbank:WP_015364382.1;Name=WP_015364382.1;gbkey=CDS;gene=yjbM;inference=COORDINATES: protein motif:HMM:NF022352.2;locus_tag=PHA55_RS01805;product=DUF2713 family protein;protein_id=WP_015364382.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	389186	389287	.	+	.	ID=gene-PHA55_RS01810;Name=PHA55_RS01810;end_range=389287,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS01810;old_locus_tag=PHA55_01810;partial=true;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	389186	389287	.	+	0	ID=cds-PHA55_RS01810;Parent=gene-PHA55_RS01810;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=389287,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313058.1;locus_tag=PHA55_RS01810;partial=true;product=tRNA-dihydrouridine synthase;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	389596	390069	.	+	.	ID=gene-PHA55_RS01815;Name=PHA55_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS01815;old_locus_tag=PHA55_01815
NZ_CP116044.1	Protein Homology	CDS	389596	390069	.	+	0	ID=cds-WP_059242328.1;Parent=gene-PHA55_RS01815;Dbxref=Genbank:WP_059242328.1;Name=WP_059242328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000287252.1;locus_tag=PHA55_RS01815;product=DUF4065 domain-containing protein;protein_id=WP_059242328.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	390092	390640	.	+	.	ID=gene-PHA55_RS01820;Name=PHA55_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS01820;old_locus_tag=PHA55_01820
NZ_CP116044.1	Protein Homology	CDS	390092	390640	.	+	0	ID=cds-WP_053878051.1;Parent=gene-PHA55_RS01820;Dbxref=Genbank:WP_053878051.1;Name=WP_053878051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019187.1;locus_tag=PHA55_RS01820;product=hypothetical protein;protein_id=WP_053878051.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	390674	390946	.	-	.	ID=gene-PHA55_RS01825;Name=PHA55_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS01825;old_locus_tag=PHA55_01825
NZ_CP116044.1	Protein Homology	CDS	390674	390946	.	-	0	ID=cds-WP_001093911.1;Parent=gene-PHA55_RS01825;Dbxref=Genbank:WP_001093911.1;Name=WP_001093911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001093911.1;locus_tag=PHA55_RS01825;product=pyocin activator PrtN family protein;protein_id=WP_001093911.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	390983	391555	.	-	.	ID=gene-PHA55_RS01830;Name=PHA55_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS01830;old_locus_tag=PHA55_01830
NZ_CP116044.1	Protein Homology	CDS	390983	391555	.	-	0	ID=cds-WP_097455382.1;Parent=gene-PHA55_RS01830;Dbxref=Genbank:WP_097455382.1;Name=WP_097455382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001061350.1;locus_tag=PHA55_RS01830;product=3'-5' exonuclease;protein_id=WP_097455382.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	391555	392517	.	-	.	ID=gene-PHA55_RS01835;Name=PHA55_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS01835;old_locus_tag=PHA55_01835
NZ_CP116044.1	Protein Homology	CDS	391555	392517	.	-	0	ID=cds-WP_271287488.1;Parent=gene-PHA55_RS01835;Dbxref=Genbank:WP_271287488.1;Name=WP_271287488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000812184.1;locus_tag=PHA55_RS01835;product=ead/Ea22-like family protein;protein_id=WP_271287488.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	392583	392891	.	-	.	ID=gene-PHA55_RS01840;Name=PHA55_RS01840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS01840;old_locus_tag=PHA55_01840;partial=true;pseudo=true;start_range=.,392583
NZ_CP116044.1	Protein Homology	CDS	392583	392891	.	-	0	ID=cds-PHA55_RS01840;Parent=gene-PHA55_RS01840;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310784.1;locus_tag=PHA55_RS01840;partial=true;product=hypothetical protein;pseudo=true;start_range=.,392583;transl_table=11
NZ_CP116044.1	RefSeq	gene	392884	393138	.	-	.	ID=gene-PHA55_RS01845;Name=PHA55_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS01845;old_locus_tag=PHA55_01845
NZ_CP116044.1	Protein Homology	CDS	392884	393138	.	-	0	ID=cds-WP_027661982.1;Parent=gene-PHA55_RS01845;Dbxref=Genbank:WP_027661982.1;Name=WP_027661982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001294161.1;locus_tag=PHA55_RS01845;product=hypothetical protein;protein_id=WP_027661982.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	393135	393374	.	-	.	ID=gene-PHA55_RS01850;Name=PHA55_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS01850;old_locus_tag=PHA55_01850
NZ_CP116044.1	Protein Homology	CDS	393135	393374	.	-	0	ID=cds-WP_000476211.1;Parent=gene-PHA55_RS01850;Dbxref=Genbank:WP_000476211.1;Name=WP_000476211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000476205.1;locus_tag=PHA55_RS01850;product=hypothetical protein;protein_id=WP_000476211.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	393367	393570	.	-	.	ID=gene-PHA55_RS01855;Name=PHA55_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS01855;old_locus_tag=PHA55_01855
NZ_CP116044.1	Protein Homology	CDS	393367	393570	.	-	0	ID=cds-WP_000111289.1;Parent=gene-PHA55_RS01855;Dbxref=Genbank:WP_000111289.1;Name=WP_000111289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019705292.1;locus_tag=PHA55_RS01855;product=hypothetical protein;protein_id=WP_000111289.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	393567	393929	.	-	.	ID=gene-PHA55_RS01860;Name=PHA55_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS01860;old_locus_tag=PHA55_01860
NZ_CP116044.1	Protein Homology	CDS	393567	393929	.	-	0	ID=cds-WP_097455379.1;Parent=gene-PHA55_RS01860;Dbxref=Genbank:WP_097455379.1;Name=WP_097455379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001242743.1;locus_tag=PHA55_RS01860;product=hypothetical protein;protein_id=WP_097455379.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	393920	394456	.	-	.	ID=gene-PHA55_RS01865;Name=yfdR;gbkey=Gene;gene=yfdR;gene_biotype=protein_coding;locus_tag=PHA55_RS01865;old_locus_tag=PHA55_01865
NZ_CP116044.1	Protein Homology	CDS	393920	394456	.	-	0	ID=cds-WP_271287489.1;Parent=gene-PHA55_RS01865;Dbxref=Genbank:WP_271287489.1;Name=WP_271287489.1;gbkey=CDS;gene=yfdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416862.2;locus_tag=PHA55_RS01865;product=5'-deoxynucleotidase;protein_id=WP_271287489.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	394585	395409	.	-	.	ID=gene-PHA55_RS01870;Name=PHA55_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS01870;old_locus_tag=PHA55_01870
NZ_CP116044.1	Protein Homology	CDS	394585	395409	.	-	0	ID=cds-WP_097455378.1;Parent=gene-PHA55_RS01870;Dbxref=Genbank:WP_097455378.1;Name=WP_097455378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416861.1;locus_tag=PHA55_RS01870;product=YfdQ family protein;protein_id=WP_097455378.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	395475	395837	.	-	.	ID=gene-PHA55_RS01875;Name=yfdP;gbkey=Gene;gene=yfdP;gene_biotype=protein_coding;locus_tag=PHA55_RS01875;old_locus_tag=PHA55_01875
NZ_CP116044.1	Protein Homology	CDS	395475	395837	.	-	0	ID=cds-WP_000135680.1;Parent=gene-PHA55_RS01875;Dbxref=Genbank:WP_000135680.1;Name=WP_000135680.1;gbkey=CDS;gene=yfdP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416860.4;locus_tag=PHA55_RS01875;product=protein YfdP;protein_id=WP_000135680.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	396549	397241	.	-	.	ID=gene-PHA55_RS01880;Name=PHA55_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS01880;old_locus_tag=PHA55_01880
NZ_CP116044.1	Protein Homology	CDS	396549	397241	.	-	0	ID=cds-WP_001345148.1;Parent=gene-PHA55_RS01880;Dbxref=Genbank:WP_001345148.1;Name=WP_001345148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001358750.1;locus_tag=PHA55_RS01880;product=helix-turn-helix transcriptional regulator;protein_id=WP_001345148.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	397339	397599	.	+	.	ID=gene-PHA55_RS01885;Name=PHA55_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS01885;old_locus_tag=PHA55_01885
NZ_CP116044.1	Protein Homology	CDS	397339	397599	.	+	0	ID=cds-WP_001191669.1;Parent=gene-PHA55_RS01885;Dbxref=Genbank:WP_001191669.1;Name=WP_001191669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001191680.1;locus_tag=PHA55_RS01885;product=helix-turn-helix transcriptional regulator;protein_id=WP_001191669.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	397592	398143	.	+	.	ID=gene-PHA55_RS01890;Name=ymfL;gbkey=Gene;gene=ymfL;gene_biotype=protein_coding;locus_tag=PHA55_RS01890;old_locus_tag=PHA55_01890
NZ_CP116044.1	Protein Homology	CDS	397592	398143	.	+	0	ID=cds-WP_023138546.1;Parent=gene-PHA55_RS01890;Dbxref=Genbank:WP_023138546.1;Name=WP_023138546.1;gbkey=CDS;gene=ymfL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415665.2;locus_tag=PHA55_RS01890;product=protein YmfL;protein_id=WP_023138546.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	398289	398468	.	+	.	ID=gene-PHA55_RS01895;Name=PHA55_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS01895;old_locus_tag=PHA55_01895
NZ_CP116044.1	Protein Homology	CDS	398289	398468	.	+	0	ID=cds-WP_001341559.1;Parent=gene-PHA55_RS01895;Dbxref=Genbank:WP_001341559.1;Name=WP_001341559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542460.1;locus_tag=PHA55_RS01895;product=DUF4222 domain-containing protein;protein_id=WP_001341559.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	398398	399291	.	+	.	ID=gene-PHA55_RS01900;Name=PHA55_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS01900;old_locus_tag=PHA55_01900
NZ_CP116044.1	Protein Homology	CDS	398398	399291	.	+	0	ID=cds-WP_271287490.1;Parent=gene-PHA55_RS01900;Dbxref=Genbank:WP_271287490.1;Name=WP_271287490.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02681.1;locus_tag=PHA55_RS01900;product=Rha family transcriptional regulator;protein_id=WP_271287490.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	399288	399512	.	+	.	ID=gene-PHA55_RS01905;Name=PHA55_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS01905;old_locus_tag=PHA55_01905
NZ_CP116044.1	Protein Homology	CDS	399288	399512	.	+	0	ID=cds-WP_000620696.1;Parent=gene-PHA55_RS01905;Dbxref=Genbank:WP_000620696.1;Name=WP_000620696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001401086.1;locus_tag=PHA55_RS01905;product=hypothetical protein;protein_id=WP_000620696.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	399509	400327	.	+	.	ID=gene-PHA55_RS01910;Name=PHA55_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS01910;old_locus_tag=PHA55_01910
NZ_CP116044.1	Protein Homology	CDS	399509	400327	.	+	0	ID=cds-WP_271287491.1;Parent=gene-PHA55_RS01910;Dbxref=Genbank:WP_271287491.1;Name=WP_271287491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000061490.1;locus_tag=PHA55_RS01910;product=helix-turn-helix domain-containing protein;protein_id=WP_271287491.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	400324	400818	.	+	.	ID=gene-PHA55_RS01915;Name=PHA55_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS01915;old_locus_tag=PHA55_01915
NZ_CP116044.1	Protein Homology	CDS	400324	400818	.	+	0	ID=cds-WP_072127929.1;Parent=gene-PHA55_RS01915;Dbxref=Genbank:WP_072127929.1;Name=WP_072127929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416858.1;locus_tag=PHA55_RS01915;product=PerC family transcriptional regulator;protein_id=WP_072127929.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	400818	401471	.	+	.	ID=gene-PHA55_RS01920;Name=PHA55_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS01920;old_locus_tag=PHA55_01920
NZ_CP116044.1	Protein Homology	CDS	400818	401471	.	+	0	ID=cds-WP_021535259.1;Parent=gene-PHA55_RS01920;Dbxref=Genbank:WP_021535259.1;Name=WP_021535259.1;Ontology_term=GO:0009007;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001378271.1;locus_tag=PHA55_RS01920;product=phage N-6-adenine-methyltransferase;protein_id=WP_021535259.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	401468	401794	.	+	.	ID=gene-PHA55_RS01925;Name=PHA55_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS01925;old_locus_tag=PHA55_01925
NZ_CP116044.1	Protein Homology	CDS	401468	401794	.	+	0	ID=cds-WP_000210164.1;Parent=gene-PHA55_RS01925;Dbxref=Genbank:WP_000210164.1;Name=WP_000210164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003878599.1;locus_tag=PHA55_RS01925;product=LexA family transcriptional regulator;protein_id=WP_000210164.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	401791	402180	.	+	.	ID=gene-PHA55_RS01930;Name=PHA55_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS01930;old_locus_tag=PHA55_01930
NZ_CP116044.1	Protein Homology	CDS	401791	402180	.	+	0	ID=cds-WP_137587996.1;Parent=gene-PHA55_RS01930;Dbxref=Genbank:WP_137587996.1;Name=WP_137587996.1;Ontology_term=GO:0006281,GO:0006310,GO:0000287;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000767134.1;locus_tag=PHA55_RS01930;product=RusA family crossover junction endodeoxyribonuclease;protein_id=WP_137587996.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	402200	403009	.	+	.	ID=gene-PHA55_RS01935;Name=PHA55_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS01935;old_locus_tag=PHA55_01935
NZ_CP116044.1	Protein Homology	CDS	402200	403009	.	+	0	ID=cds-WP_024246862.1;Parent=gene-PHA55_RS01935;Dbxref=Genbank:WP_024246862.1;Name=WP_024246862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001061418.1;locus_tag=PHA55_RS01935;product=KilA-N domain-containing protein;protein_id=WP_024246862.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	403017	404006	.	+	.	ID=gene-PHA55_RS01940;Name=PHA55_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS01940;old_locus_tag=PHA55_01940
NZ_CP116044.1	Protein Homology	CDS	403017	404006	.	+	0	ID=cds-WP_001360050.1;Parent=gene-PHA55_RS01940;Dbxref=Genbank:WP_001360050.1;Name=WP_001360050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001764249.1;locus_tag=PHA55_RS01940;product=DUF968 domain-containing protein;protein_id=WP_001360050.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	404020	404772	.	+	.	ID=gene-PHA55_RS01945;Name=ydfT;gbkey=Gene;gene=ydfT;gene_biotype=protein_coding;locus_tag=PHA55_RS01945;old_locus_tag=PHA55_01945
NZ_CP116044.1	Protein Homology	CDS	404020	404772	.	+	0	ID=cds-WP_194499684.1;Parent=gene-PHA55_RS01945;Dbxref=Genbank:WP_194499684.1;Name=WP_194499684.1;gbkey=CDS;gene=ydfT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416077.4;locus_tag=PHA55_RS01945;product=antitermination protein;protein_id=WP_194499684.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	405053	405478	.	+	.	ID=gene-PHA55_RS01950;Name=PHA55_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS01950;old_locus_tag=PHA55_01950
NZ_CP116044.1	Protein Homology	CDS	405053	405478	.	+	0	ID=cds-WP_000115362.1;Parent=gene-PHA55_RS01950;Dbxref=Genbank:WP_000115362.1;Name=WP_000115362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000115362.1;locus_tag=PHA55_RS01950;product=hypothetical protein;protein_id=WP_000115362.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	405702	405899	.	+	.	ID=gene-PHA55_RS01955;Name=PHA55_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS01955;old_locus_tag=PHA55_01955
NZ_CP116044.1	Protein Homology	CDS	405702	405899	.	+	0	ID=cds-WP_000917767.1;Parent=gene-PHA55_RS01955;Dbxref=Genbank:WP_000917767.1;Name=WP_000917767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001665978.1;locus_tag=PHA55_RS01955;product=hypothetical protein;protein_id=WP_000917767.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	406036	406749	.	+	.	ID=gene-PHA55_RS01960;Name=PHA55_RS01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS01960;old_locus_tag=PHA55_01960
NZ_CP116044.1	Protein Homology	CDS	406036	406749	.	+	0	ID=cds-WP_097449976.1;Parent=gene-PHA55_RS01960;Dbxref=Genbank:WP_097449976.1;Name=WP_097449976.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301789.1;locus_tag=PHA55_RS01960;product=helix-turn-helix domain-containing protein;protein_id=WP_097449976.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	406776	406851	.	+	.	ID=gene-PHA55_RS01965;Name=PHA55_RS01965;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS01965;old_locus_tag=PHA55_01965
NZ_CP116044.1	tRNAscan-SE	tRNA	406776	406851	.	+	.	ID=rna-PHA55_RS01965;Parent=gene-PHA55_RS01965;anticodon=(pos:406809..406811);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS01965;product=tRNA-Ile
NZ_CP116044.1	tRNAscan-SE	exon	406776	406851	.	+	.	ID=exon-PHA55_RS01965-1;Parent=rna-PHA55_RS01965;anticodon=(pos:406809..406811);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS01965;product=tRNA-Ile
NZ_CP116044.1	RefSeq	gene	406861	406937	.	+	.	ID=gene-PHA55_RS01970;Name=PHA55_RS01970;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS01970;old_locus_tag=PHA55_01970
NZ_CP116044.1	tRNAscan-SE	tRNA	406861	406937	.	+	.	ID=rna-PHA55_RS01970;Parent=gene-PHA55_RS01970;anticodon=(pos:406895..406897);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS01970;product=tRNA-Arg
NZ_CP116044.1	tRNAscan-SE	exon	406861	406937	.	+	.	ID=exon-PHA55_RS01970-1;Parent=rna-PHA55_RS01970;anticodon=(pos:406895..406897);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS01970;product=tRNA-Arg
NZ_CP116044.1	RefSeq	gene	406951	407027	.	+	.	ID=gene-PHA55_RS01975;Name=PHA55_RS01975;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS01975;old_locus_tag=PHA55_01975
NZ_CP116044.1	tRNAscan-SE	tRNA	406951	407027	.	+	.	ID=rna-PHA55_RS01975;Parent=gene-PHA55_RS01975;anticodon=(pos:406985..406987);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS01975;product=tRNA-Arg
NZ_CP116044.1	tRNAscan-SE	exon	406951	407027	.	+	.	ID=exon-PHA55_RS01975-1;Parent=rna-PHA55_RS01975;anticodon=(pos:406985..406987);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS01975;product=tRNA-Arg
NZ_CP116044.1	RefSeq	gene	407119	408078	.	+	.	ID=gene-PHA55_RS01980;Name=stxA2;gbkey=Gene;gene=stxA2;gene_biotype=protein_coding;locus_tag=PHA55_RS01980;old_locus_tag=PHA55_01980
NZ_CP116044.1	Protein Homology	CDS	407119	408078	.	+	0	ID=cds-WP_097449975.1;Parent=gene-PHA55_RS01980;Dbxref=Genbank:WP_097449975.1;Name=WP_097449975.1;gbkey=CDS;gene=stxA2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309232.1;locus_tag=PHA55_RS01980;product=Shiga toxin Stx2 subunit A;protein_id=WP_097449975.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	408090	408359	.	+	.	ID=gene-PHA55_RS01985;Name=PHA55_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS01985;old_locus_tag=PHA55_01985
NZ_CP116044.1	Protein Homology	CDS	408090	408359	.	+	0	ID=cds-WP_000738076.1;Parent=gene-PHA55_RS01985;Dbxref=Genbank:WP_000738076.1;Name=WP_000738076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309233.1;locus_tag=PHA55_RS01985;product=Shiga toxin Stx2d subunit B;protein_id=WP_000738076.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	408547	408870	.	-	.	ID=gene-PHA55_RS01990;Name=iraM;gbkey=Gene;gene=iraM;gene_biotype=protein_coding;locus_tag=PHA55_RS01990;old_locus_tag=PHA55_01990
NZ_CP116044.1	Protein Homology	CDS	408547	408870	.	-	0	ID=cds-WP_096129430.1;Parent=gene-PHA55_RS01990;Dbxref=Genbank:WP_096129430.1;Name=WP_096129430.1;gbkey=CDS;gene=iraM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295666.1;locus_tag=PHA55_RS01990;product=anti-adapter protein IraM;protein_id=WP_096129430.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	409136	409351	.	+	.	ID=gene-PHA55_RS01995;Name=PHA55_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS01995;old_locus_tag=PHA55_01995
NZ_CP116044.1	Protein Homology	CDS	409136	409351	.	+	0	ID=cds-WP_097449974.1;Parent=gene-PHA55_RS01995;Dbxref=Genbank:WP_097449974.1;Name=WP_097449974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309239.1;locus_tag=PHA55_RS01995;product=class II holin family protein;protein_id=WP_097449974.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	409356	409700	.	+	.	ID=gene-PHA55_RS02000;Name=PHA55_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02000;old_locus_tag=PHA55_02000
NZ_CP116044.1	Protein Homology	CDS	409356	409700	.	+	0	ID=cds-WP_271287492.1;Parent=gene-PHA55_RS02000;Dbxref=Genbank:WP_271287492.1;Name=WP_271287492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000731183.1;locus_tag=PHA55_RS02000;product=YdfR family protein;protein_id=WP_271287492.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	409666	409938	.	-	.	ID=gene-PHA55_RS02005;Name=PHA55_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02005;old_locus_tag=PHA55_02005
NZ_CP116044.1	Protein Homology	CDS	409666	409938	.	-	0	ID=cds-WP_161620918.1;Parent=gene-PHA55_RS02005;Dbxref=Genbank:WP_161620918.1;Name=WP_161620918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000370550.1;locus_tag=PHA55_RS02005;product=hypothetical protein;protein_id=WP_161620918.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	410117	410509	.	+	.	ID=gene-PHA55_RS02010;Name=PHA55_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02010;old_locus_tag=PHA55_02010
NZ_CP116044.1	Protein Homology	CDS	410117	410509	.	+	0	ID=cds-WP_097449971.1;Parent=gene-PHA55_RS02010;Dbxref=Genbank:WP_097449971.1;Name=WP_097449971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001406273.1;locus_tag=PHA55_RS02010;product=putative holin;protein_id=WP_097449971.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	410499	410774	.	+	.	ID=gene-PHA55_RS02015;Name=PHA55_RS02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02015;old_locus_tag=PHA55_02015
NZ_CP116044.1	Protein Homology	CDS	410499	410774	.	+	0	ID=cds-WP_161619110.1;Parent=gene-PHA55_RS02015;Dbxref=Genbank:WP_161619110.1;Name=WP_161619110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000950483.1;locus_tag=PHA55_RS02015;product=phage holin family protein;protein_id=WP_161619110.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	410777	411154	.	+	.	ID=gene-PHA55_RS02020;Name=PHA55_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02020;old_locus_tag=PHA55_02020
NZ_CP116044.1	Protein Homology	CDS	410777	411154	.	+	0	ID=cds-WP_089606971.1;Parent=gene-PHA55_RS02020;Dbxref=Genbank:WP_089606971.1;Name=WP_089606971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014543.1;locus_tag=PHA55_RS02020;product=M15 family metallopeptidase;protein_id=WP_089606971.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	411225	411506	.	+	.	ID=gene-PHA55_RS02025;Name=PHA55_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02025;old_locus_tag=PHA55_02025
NZ_CP116044.1	Protein Homology	CDS	411225	411506	.	+	0	ID=cds-WP_161620342.1;Parent=gene-PHA55_RS02025;Dbxref=Genbank:WP_161620342.1;Name=WP_161620342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000271100.1;locus_tag=PHA55_RS02025;product=hypothetical protein;protein_id=WP_161620342.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	411638	411751	.	+	.	ID=gene-PHA55_RS02030;Name=PHA55_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02030;old_locus_tag=PHA55_02030
NZ_CP116044.1	Protein Homology	CDS	411638	411751	.	+	0	ID=cds-WP_001305859.1;Parent=gene-PHA55_RS02030;Dbxref=Genbank:WP_001305859.1;Name=WP_001305859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309121.1;locus_tag=PHA55_RS02030;product=hypothetical protein;protein_id=WP_001305859.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	412526	413071	.	+	.	ID=gene-PHA55_RS02035;Name=PHA55_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02035;old_locus_tag=PHA55_02035
NZ_CP116044.1	Protein Homology	CDS	412526	413071	.	+	0	ID=cds-WP_000453587.1;Parent=gene-PHA55_RS02035;Dbxref=Genbank:WP_000453587.1;Name=WP_000453587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415092.1;locus_tag=PHA55_RS02035;product=DNA-packaging protein;protein_id=WP_000453587.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	413046	414971	.	+	.	ID=gene-PHA55_RS02040;Name=PHA55_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02040;old_locus_tag=PHA55_02040
NZ_CP116044.1	Protein Homology	CDS	413046	414971	.	+	0	ID=cds-WP_260589788.1;Parent=gene-PHA55_RS02040;Dbxref=Genbank:WP_260589788.1;Name=WP_260589788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309657.1;locus_tag=PHA55_RS02040;product=phage terminase large subunit family protein;protein_id=WP_260589788.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	414968	415174	.	+	.	ID=gene-PHA55_RS02045;Name=PHA55_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02045;old_locus_tag=PHA55_02045
NZ_CP116044.1	Protein Homology	CDS	414968	415174	.	+	0	ID=cds-WP_000198149.1;Parent=gene-PHA55_RS02045;Dbxref=Genbank:WP_000198149.1;Name=WP_000198149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309658.1;locus_tag=PHA55_RS02045;product=gpW family protein;protein_id=WP_000198149.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	415171	416772	.	+	.	ID=gene-PHA55_RS02050;Name=PHA55_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02050;old_locus_tag=PHA55_02050
NZ_CP116044.1	Protein Homology	CDS	415171	416772	.	+	0	ID=cds-WP_001345555.1;Parent=gene-PHA55_RS02050;Dbxref=Genbank:WP_001345555.1;Name=WP_001345555.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309659.1;locus_tag=PHA55_RS02050;product=phage portal protein;protein_id=WP_001345555.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	416753	418072	.	+	.	ID=gene-PHA55_RS02055;Name=PHA55_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02055;old_locus_tag=PHA55_02055
NZ_CP116044.1	Protein Homology	CDS	416753	418072	.	+	0	ID=cds-WP_000123248.1;Parent=gene-PHA55_RS02055;Dbxref=Genbank:WP_000123248.1;Name=WP_000123248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309660.1;locus_tag=PHA55_RS02055;product=S49 family peptidase;protein_id=WP_000123248.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	418082	418414	.	+	.	ID=gene-PHA55_RS02060;Name=PHA55_RS02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02060;old_locus_tag=PHA55_02060
NZ_CP116044.1	Protein Homology	CDS	418082	418414	.	+	0	ID=cds-WP_001358225.1;Parent=gene-PHA55_RS02060;Dbxref=Genbank:WP_001358225.1;Name=WP_001358225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309661.1;locus_tag=PHA55_RS02060;product=head decoration protein;protein_id=WP_001358225.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	418470	419495	.	+	.	ID=gene-PHA55_RS02065;Name=PHA55_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02065;old_locus_tag=PHA55_02065
NZ_CP116044.1	Protein Homology	CDS	418470	419495	.	+	0	ID=cds-WP_000063254.1;Parent=gene-PHA55_RS02065;Dbxref=Genbank:WP_000063254.1;Name=WP_000063254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309662.1;locus_tag=PHA55_RS02065;product=major capsid protein;protein_id=WP_000063254.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	419537	419932	.	+	.	ID=gene-PHA55_RS02070;Name=PHA55_RS02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02070;old_locus_tag=PHA55_02070
NZ_CP116044.1	Protein Homology	CDS	419537	419932	.	+	0	ID=cds-WP_000158875.1;Parent=gene-PHA55_RS02070;Dbxref=Genbank:WP_000158875.1;Name=WP_000158875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309663.1;locus_tag=PHA55_RS02070;product=DNA-packaging protein FI;protein_id=WP_000158875.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	419944	420297	.	+	.	ID=gene-PHA55_RS02075;Name=PHA55_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02075;old_locus_tag=PHA55_02075
NZ_CP116044.1	Protein Homology	CDS	419944	420297	.	+	0	ID=cds-WP_000785282.1;Parent=gene-PHA55_RS02075;Dbxref=Genbank:WP_000785282.1;Name=WP_000785282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309664.1;locus_tag=PHA55_RS02075;product=head-tail joining protein;protein_id=WP_000785282.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	420309	420887	.	+	.	ID=gene-PHA55_RS02080;Name=PHA55_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02080;old_locus_tag=PHA55_02080
NZ_CP116044.1	Protein Homology	CDS	420309	420887	.	+	0	ID=cds-WP_000975081.1;Parent=gene-PHA55_RS02080;Dbxref=Genbank:WP_000975081.1;Name=WP_000975081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309665.1;locus_tag=PHA55_RS02080;product=phage tail protein;protein_id=WP_000975081.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	420884	421279	.	+	.	ID=gene-PHA55_RS02085;Name=PHA55_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02085;old_locus_tag=PHA55_02085
NZ_CP116044.1	Protein Homology	CDS	420884	421279	.	+	0	ID=cds-WP_000683105.1;Parent=gene-PHA55_RS02085;Dbxref=Genbank:WP_000683105.1;Name=WP_000683105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309666.1;locus_tag=PHA55_RS02085;product=phage minor tail U family protein;protein_id=WP_000683105.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	421287	422027	.	+	.	ID=gene-PHA55_RS02090;Name=PHA55_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02090;old_locus_tag=PHA55_02090
NZ_CP116044.1	Protein Homology	CDS	421287	422027	.	+	0	ID=cds-WP_001358372.1;Parent=gene-PHA55_RS02090;Dbxref=Genbank:WP_001358372.1;Name=WP_001358372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309667.1;locus_tag=PHA55_RS02090;product=phage tail protein;protein_id=WP_001358372.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	422043	422465	.	+	.	ID=gene-PHA55_RS02095;Name=PHA55_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02095;old_locus_tag=PHA55_02095
NZ_CP116044.1	Protein Homology	CDS	422043	422465	.	+	0	ID=cds-WP_000479142.1;Parent=gene-PHA55_RS02095;Dbxref=Genbank:WP_000479142.1;Name=WP_000479142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309668.1;locus_tag=PHA55_RS02095;product=phage minor tail protein G;protein_id=WP_000479142.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	422447	422881	.	+	.	ID=gene-PHA55_RS02100;Name=PHA55_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02100;old_locus_tag=PHA55_02100
NZ_CP116044.1	Protein Homology	CDS	422447	422881	.	+	0	ID=cds-WP_000459457.1;Parent=gene-PHA55_RS02100;Dbxref=Genbank:WP_000459457.1;Name=WP_000459457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309669.1;locus_tag=PHA55_RS02100;product=phage tail assembly protein T;protein_id=WP_000459457.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	422874	425453	.	+	.	ID=gene-PHA55_RS02105;Name=PHA55_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02105;old_locus_tag=PHA55_02105
NZ_CP116044.1	Protein Homology	CDS	422874	425453	.	+	0	ID=cds-WP_260589787.1;Parent=gene-PHA55_RS02105;Dbxref=Genbank:WP_260589787.1;Name=WP_260589787.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309670.1;locus_tag=PHA55_RS02105;product=phage tail tape measure protein;protein_id=WP_260589787.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	425450	425779	.	+	.	ID=gene-PHA55_RS02110;Name=PHA55_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02110;old_locus_tag=PHA55_02110
NZ_CP116044.1	Protein Homology	CDS	425450	425779	.	+	0	ID=cds-WP_000847373.1;Parent=gene-PHA55_RS02110;Dbxref=Genbank:WP_000847373.1;Name=WP_000847373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309671.1;locus_tag=PHA55_RS02110;product=phage tail protein;protein_id=WP_000847373.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	425779	426477	.	+	.	ID=gene-PHA55_RS02115;Name=PHA55_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02115;old_locus_tag=PHA55_02115
NZ_CP116044.1	Protein Homology	CDS	425779	426477	.	+	0	ID=cds-WP_001152639.1;Parent=gene-PHA55_RS02115;Dbxref=Genbank:WP_001152639.1;Name=WP_001152639.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309672.1;locus_tag=PHA55_RS02115;product=phage minor tail protein L;protein_id=WP_001152639.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	426483	427226	.	+	.	ID=gene-PHA55_RS02120;Name=PHA55_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02120;old_locus_tag=PHA55_02120
NZ_CP116044.1	Protein Homology	CDS	426483	427226	.	+	0	ID=cds-WP_000194783.1;Parent=gene-PHA55_RS02120;Dbxref=Genbank:WP_000194783.1;Name=WP_000194783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309673.1;locus_tag=PHA55_RS02120;product=C40 family peptidase;protein_id=WP_000194783.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	427223	427795	.	+	.	ID=gene-PHA55_RS02125;Name=PHA55_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02125;old_locus_tag=PHA55_02125
NZ_CP116044.1	Protein Homology	CDS	427223	427795	.	+	0	ID=cds-WP_000847669.1;Parent=gene-PHA55_RS02125;Dbxref=Genbank:WP_000847669.1;Name=WP_000847669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309674.2;locus_tag=PHA55_RS02125;product=tail assembly protein;protein_id=WP_000847669.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	427856	431353	.	+	.	ID=gene-PHA55_RS02130;Name=PHA55_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02130;old_locus_tag=PHA55_02130
NZ_CP116044.1	Protein Homology	CDS	427856	431353	.	+	0	ID=cds-WP_271287493.1;Parent=gene-PHA55_RS02130;Dbxref=Genbank:WP_271287493.1;Name=WP_271287493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308869.1;locus_tag=PHA55_RS02130;product=host specificity protein J;protein_id=WP_271287493.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	431424	432023	.	+	.	ID=gene-PHA55_RS02135;Name=PHA55_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02135;old_locus_tag=PHA55_02135
NZ_CP116044.1	Protein Homology	CDS	431424	432023	.	+	0	ID=cds-WP_001233090.1;Parent=gene-PHA55_RS02135;Dbxref=Genbank:WP_001233090.1;Name=WP_001233090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309676.1;locus_tag=PHA55_RS02135;product=Ail/Lom family protein;protein_id=WP_001233090.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	432078	432464	.	+	.	ID=gene-PHA55_RS02140;Name=PHA55_RS02140;end_range=432464,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS02140;old_locus_tag=PHA55_02140;partial=true;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	432078	432464	.	+	0	ID=cds-PHA55_RS02140;Parent=gene-PHA55_RS02140;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=432464,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311620.1;locus_tag=PHA55_RS02140;partial=true;product=prophage tail fiber N-terminal domain-containing protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	433974	434219	.	+	.	ID=gene-PHA55_RS02145;Name=PHA55_RS02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02145;old_locus_tag=PHA55_02145
NZ_CP116044.1	Protein Homology	CDS	433974	434219	.	+	0	ID=cds-WP_271287494.1;Parent=gene-PHA55_RS02145;Dbxref=Genbank:WP_271287494.1;Name=WP_271287494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000355361.1;locus_tag=PHA55_RS02145;product=hypothetical protein;protein_id=WP_271287494.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	434337	434585	.	-	.	ID=gene-PHA55_RS02150;Name=PHA55_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02150;old_locus_tag=PHA55_02150
NZ_CP116044.1	Protein Homology	CDS	434337	434585	.	-	0	ID=cds-WP_001217553.1;Parent=gene-PHA55_RS02150;Dbxref=Genbank:WP_001217553.1;Name=WP_001217553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707727.1;locus_tag=PHA55_RS02150;product=DinI-like family protein;protein_id=WP_001217553.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	434647	435744	.	-	.	ID=gene-PHA55_RS02155;Name=PHA55_RS02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02155;old_locus_tag=PHA55_02155
NZ_CP116044.1	Protein Homology	CDS	434647	435744	.	-	0	ID=cds-WP_000332269.1;Parent=gene-PHA55_RS02155;Dbxref=Genbank:WP_000332269.1;Name=WP_000332269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000332260.1;locus_tag=PHA55_RS02155;product=site-specific integrase;protein_id=WP_000332269.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	435833	436870	.	+	.	ID=gene-PHA55_RS02160;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=PHA55_RS02160;old_locus_tag=PHA55_02160
NZ_CP116044.1	Protein Homology	CDS	435833	436870	.	+	0	ID=cds-WP_000543841.1;Parent=gene-PHA55_RS02160;Dbxref=Genbank:WP_000543841.1;Name=WP_000543841.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313058.1;locus_tag=PHA55_RS02160;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_000543841.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	437004	437246	.	+	.	ID=gene-PHA55_RS02165;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=PHA55_RS02165;old_locus_tag=PHA55_02165
NZ_CP116044.1	Protein Homology	CDS	437004	437246	.	+	0	ID=cds-WP_000891389.1;Parent=gene-PHA55_RS02165;Dbxref=Genbank:WP_000891389.1;Name=WP_000891389.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313059.2;locus_tag=PHA55_RS02165;product=envelope stress response protein PspG;protein_id=WP_000891389.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	437412	438395	.	-	.	ID=gene-PHA55_RS02170;Name=qorA;gbkey=Gene;gene=qorA;gene_biotype=protein_coding;locus_tag=PHA55_RS02170;old_locus_tag=PHA55_02170
NZ_CP116044.1	Protein Homology	CDS	437412	438395	.	-	0	ID=cds-WP_000235522.1;Parent=gene-PHA55_RS02170;Dbxref=Genbank:WP_000235522.1;Name=WP_000235522.1;gbkey=CDS;gene=qorA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313060.1;locus_tag=PHA55_RS02170;product=quinone oxidoreductase;protein_id=WP_000235522.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	438478	439893	.	+	.	ID=gene-PHA55_RS02175;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=PHA55_RS02175;old_locus_tag=PHA55_02175
NZ_CP116044.1	Protein Homology	CDS	438478	439893	.	+	0	ID=cds-WP_000918363.1;Parent=gene-PHA55_RS02175;Dbxref=Genbank:WP_000918363.1;Name=WP_000918363.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418476.1;locus_tag=PHA55_RS02175;product=replicative DNA helicase;protein_id=WP_000918363.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	439946	441025	.	+	.	ID=gene-PHA55_RS02180;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=PHA55_RS02180;old_locus_tag=PHA55_02180
NZ_CP116044.1	Protein Homology	CDS	439946	441025	.	+	0	ID=cds-WP_001147324.1;Parent=gene-PHA55_RS02180;Dbxref=Genbank:WP_001147324.1;Name=WP_001147324.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418477.1;locus_tag=PHA55_RS02180;product=alanine racemase;protein_id=WP_001147324.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	441278	442471	.	+	.	ID=gene-PHA55_RS02185;Name=tyrB;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;locus_tag=PHA55_RS02185;old_locus_tag=PHA55_02185
NZ_CP116044.1	Protein Homology	CDS	441278	442471	.	+	0	ID=cds-WP_000486964.1;Parent=gene-PHA55_RS02185;Dbxref=Genbank:WP_000486964.1;Name=WP_000486964.1;gbkey=CDS;gene=tyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313063.1;locus_tag=PHA55_RS02185;product=aromatic amino acid transaminase;protein_id=WP_000486964.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	442693	442944	.	-	.	ID=gene-PHA55_RS02190;Name=PHA55_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02190;old_locus_tag=PHA55_02190
NZ_CP116044.1	GeneMarkS-2+	CDS	442693	442944	.	-	0	ID=cds-WP_000275035.1;Parent=gene-PHA55_RS02190;Dbxref=Genbank:WP_000275035.1;Name=WP_000275035.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA55_RS02190;product=hypothetical protein;protein_id=WP_000275035.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	442974	443196	.	-	.	ID=gene-PHA55_RS02195;Name=PHA55_RS02195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS02195;old_locus_tag=PHA55_02195;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	442974	443196	.	-	0	ID=cds-PHA55_RS02195;Parent=gene-PHA55_RS02195;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165333.1;locus_tag=PHA55_RS02195;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	443598	444311	.	+	.	ID=gene-PHA55_RS02200;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=PHA55_RS02200;old_locus_tag=PHA55_02200
NZ_CP116044.1	Protein Homology	CDS	443598	444311	.	+	0	ID=cds-WP_001307512.1;Parent=gene-PHA55_RS02200;Dbxref=Genbank:WP_001307512.1;Name=WP_001307512.1;Ontology_term=GO:0003993;gbkey=CDS;gene=aphA;go_function=acid phosphatase activity|0003993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418479.1;locus_tag=PHA55_RS02200;product=acid phosphatase AphA;protein_id=WP_001307512.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	444422	444838	.	+	.	ID=gene-PHA55_RS02205;Name=yjbQ;gbkey=Gene;gene=yjbQ;gene_biotype=protein_coding;locus_tag=PHA55_RS02205;old_locus_tag=PHA55_02205
NZ_CP116044.1	Protein Homology	CDS	444422	444838	.	+	0	ID=cds-WP_000270372.1;Parent=gene-PHA55_RS02205;Dbxref=Genbank:WP_000270372.1;Name=WP_000270372.1;Ontology_term=GO:0008150,GO:0003824,GO:0005737;gbkey=CDS;gene=yjbQ;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313065.1;locus_tag=PHA55_RS02205;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_000270372.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	444842	445198	.	+	.	ID=gene-PHA55_RS02210;Name=yjbR;gbkey=Gene;gene=yjbR;gene_biotype=protein_coding;locus_tag=PHA55_RS02210;old_locus_tag=PHA55_02210
NZ_CP116044.1	Protein Homology	CDS	444842	445198	.	+	0	ID=cds-WP_000155657.1;Parent=gene-PHA55_RS02210;Dbxref=Genbank:WP_000155657.1;Name=WP_000155657.1;gbkey=CDS;gene=yjbR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313066.1;locus_tag=PHA55_RS02210;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000155657.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	445233	448055	.	-	.	ID=gene-PHA55_RS02215;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=PHA55_RS02215;old_locus_tag=PHA55_02215
NZ_CP116044.1	Protein Homology	CDS	445233	448055	.	-	0	ID=cds-WP_000357740.1;Parent=gene-PHA55_RS02215;Dbxref=Genbank:WP_000357740.1;Name=WP_000357740.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418482.1;locus_tag=PHA55_RS02215;product=excinuclease ABC subunit UvrA;protein_id=WP_000357740.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	448309	448845	.	+	.	ID=gene-PHA55_RS02220;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=PHA55_RS02220;old_locus_tag=PHA55_02220
NZ_CP116044.1	Protein Homology	CDS	448309	448845	.	+	0	ID=cds-WP_000168305.1;Parent=gene-PHA55_RS02220;Dbxref=Genbank:WP_000168305.1;Name=WP_000168305.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313068.1;locus_tag=PHA55_RS02220;product=single-stranded DNA-binding protein SSB1;protein_id=WP_000168305.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	448944	449225	.	-	.	ID=gene-PHA55_RS02225;Name=yjcB;gbkey=Gene;gene=yjcB;gene_biotype=protein_coding;locus_tag=PHA55_RS02225;old_locus_tag=PHA55_02225
NZ_CP116044.1	Protein Homology	CDS	448944	449225	.	-	0	ID=cds-WP_001295689.1;Parent=gene-PHA55_RS02225;Dbxref=Genbank:WP_001295689.1;Name=WP_001295689.1;gbkey=CDS;gene=yjcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313069.2;locus_tag=PHA55_RS02225;product=YjcB family protein;protein_id=WP_001295689.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	449655	451241	.	+	.	ID=gene-PHA55_RS02230;Name=pdeC;gbkey=Gene;gene=pdeC;gene_biotype=protein_coding;locus_tag=PHA55_RS02230;old_locus_tag=PHA55_02230
NZ_CP116044.1	Protein Homology	CDS	449655	451241	.	+	0	ID=cds-WP_000019536.1;Parent=gene-PHA55_RS02230;Dbxref=Genbank:WP_000019536.1;Name=WP_000019536.1;gbkey=CDS;gene=pdeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418485.1;locus_tag=PHA55_RS02230;product=c-di-GMP phosphodiesterase PdeC;protein_id=WP_000019536.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	451244	451567	.	-	.	ID=gene-PHA55_RS02235;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=PHA55_RS02235;old_locus_tag=PHA55_02235
NZ_CP116044.1	Protein Homology	CDS	451244	451567	.	-	0	ID=cds-WP_000019358.1;Parent=gene-PHA55_RS02235;Dbxref=Genbank:WP_000019358.1;Name=WP_000019358.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313071.1;locus_tag=PHA55_RS02235;product=superoxide response transcriptional regulator SoxS;protein_id=WP_000019358.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	451653	452117	.	+	.	ID=gene-PHA55_RS02240;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=PHA55_RS02240;old_locus_tag=PHA55_02240
NZ_CP116044.1	Protein Homology	CDS	451653	452117	.	+	0	ID=cds-WP_000412428.1;Parent=gene-PHA55_RS02240;Dbxref=Genbank:WP_000412428.1;Name=WP_000412428.1;Ontology_term=GO:0006355,GO:0006979,GO:0003677,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313072.1;locus_tag=PHA55_RS02240;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_000412428.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	452663	454012	.	+	.	ID=gene-PHA55_RS02245;Name=ghxP;gbkey=Gene;gene=ghxP;gene_biotype=protein_coding;gene_synonym=yjcD;locus_tag=PHA55_RS02245;old_locus_tag=PHA55_02245
NZ_CP116044.1	Protein Homology	CDS	452663	454012	.	+	0	ID=cds-WP_000106882.1;Parent=gene-PHA55_RS02245;Dbxref=Genbank:WP_000106882.1;Name=WP_000106882.1;gbkey=CDS;gene=ghxP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=PHA55_RS02245;product=guanine/hypoxanthine transporter GhxP;protein_id=WP_000106882.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	454163	455812	.	+	.	ID=gene-PHA55_RS02250;Name=yjcE;gbkey=Gene;gene=yjcE;gene_biotype=protein_coding;locus_tag=PHA55_RS02250;old_locus_tag=PHA55_02250
NZ_CP116044.1	Protein Homology	CDS	454163	455812	.	+	0	ID=cds-WP_000402207.1;Parent=gene-PHA55_RS02250;Dbxref=Genbank:WP_000402207.1;Name=WP_000402207.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385;gbkey=CDS;gene=yjcE;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313074.1;locus_tag=PHA55_RS02250;product=Na+/H+ antiporter;protein_id=WP_000402207.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	455966	457258	.	-	.	ID=gene-PHA55_RS02255;Name=yjcF;gbkey=Gene;gene=yjcF;gene_biotype=protein_coding;locus_tag=PHA55_RS02255;old_locus_tag=PHA55_02255
NZ_CP116044.1	Protein Homology	CDS	455966	457258	.	-	0	ID=cds-WP_255776207.1;Parent=gene-PHA55_RS02255;Dbxref=Genbank:WP_255776207.1;Name=WP_255776207.1;gbkey=CDS;gene=yjcF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709843.1;locus_tag=PHA55_RS02255;product=pentapeptide repeat-containing protein;protein_id=WP_255776207.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	457436	459085	.	-	.	ID=gene-PHA55_RS02260;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=PHA55_RS02260;old_locus_tag=PHA55_02260
NZ_CP116044.1	Protein Homology	CDS	457436	459085	.	-	0	ID=cds-WP_000832573.1;Parent=gene-PHA55_RS02260;Dbxref=Genbank:WP_000832573.1;Name=WP_000832573.1;Ontology_term=GO:0006814,GO:0015370,GO:0031402,GO:0005886;gbkey=CDS;gene=actP;go_component=plasma membrane|0005886||IEA;go_function=solute:sodium symporter activity|0015370||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418491.1;locus_tag=PHA55_RS02260;product=cation/acetate symporter ActP;protein_id=WP_000832573.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	459082	459396	.	-	.	ID=gene-PHA55_RS02265;Name=yjcH;gbkey=Gene;gene=yjcH;gene_biotype=protein_coding;locus_tag=PHA55_RS02265;old_locus_tag=PHA55_02265
NZ_CP116044.1	Protein Homology	CDS	459082	459396	.	-	0	ID=cds-WP_001014565.1;Parent=gene-PHA55_RS02265;Dbxref=Genbank:WP_001014565.1;Name=WP_001014565.1;gbkey=CDS;gene=yjcH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418492.1;locus_tag=PHA55_RS02265;product=DUF485 domain-containing protein;protein_id=WP_001014565.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	459596	461554	.	-	.	ID=gene-PHA55_RS02270;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=PHA55_RS02270;old_locus_tag=PHA55_02270
NZ_CP116044.1	Protein Homology	CDS	459596	461554	.	-	0	ID=cds-WP_000078239.1;Parent=gene-PHA55_RS02270;Dbxref=Genbank:WP_000078239.1;Name=WP_000078239.1;Ontology_term=GO:0019427,GO:0003987;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418493.1;locus_tag=PHA55_RS02270;product=acetate--CoA ligase;protein_id=WP_000078239.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	461946	463382	.	+	.	ID=gene-PHA55_RS02275;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=PHA55_RS02275;old_locus_tag=PHA55_02275
NZ_CP116044.1	Protein Homology	CDS	461946	463382	.	+	0	ID=cds-WP_000196875.1;Parent=gene-PHA55_RS02275;Dbxref=Genbank:WP_000196875.1;Name=WP_000196875.1;Ontology_term=GO:0042279;gbkey=CDS;gene=nrfA;go_function=nitrite reductase (cytochrome%2C ammonia-forming) activity|0042279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313079.1;locus_tag=PHA55_RS02275;product=ammonia-forming nitrite reductase cytochrome c552 subunit;protein_id=WP_000196875.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	463427	463993	.	+	.	ID=gene-PHA55_RS02280;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=PHA55_RS02280;old_locus_tag=PHA55_02280
NZ_CP116044.1	Protein Homology	CDS	463427	463993	.	+	0	ID=cds-WP_001295391.1;Parent=gene-PHA55_RS02280;Dbxref=Genbank:WP_001295391.1;Name=WP_001295391.1;Ontology_term=GO:0006807,GO:0042597;gbkey=CDS;gene=nrfB;go_component=periplasmic space|0042597||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418495.2;locus_tag=PHA55_RS02280;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=WP_001295391.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	463990	464661	.	+	.	ID=gene-PHA55_RS02285;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;locus_tag=PHA55_RS02285;old_locus_tag=PHA55_02285
NZ_CP116044.1	Protein Homology	CDS	463990	464661	.	+	0	ID=cds-WP_000220281.1;Parent=gene-PHA55_RS02285;Dbxref=Genbank:WP_000220281.1;Name=WP_000220281.1;gbkey=CDS;gene=nrfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313081.1;locus_tag=PHA55_RS02285;product=cytochrome c nitrite reductase Fe-S protein;protein_id=WP_000220281.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	464658	465614	.	+	.	ID=gene-PHA55_RS02290;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=PHA55_RS02290;old_locus_tag=PHA55_02290
NZ_CP116044.1	Protein Homology	CDS	464658	465614	.	+	0	ID=cds-WP_271287495.1;Parent=gene-PHA55_RS02290;Dbxref=Genbank:WP_271287495.1;Name=WP_271287495.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418497.1;locus_tag=PHA55_RS02290;product=cytochrome c nitrite reductase subunit NrfD;protein_id=WP_271287495.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	465634	467352	.	+	.	ID=gene-PHA55_RS02295;Name=nrfE;gbkey=Gene;gene=nrfE;gene_biotype=protein_coding;locus_tag=PHA55_RS02295;old_locus_tag=PHA55_02295
NZ_CP116044.1	Protein Homology	CDS	465634	467352	.	+	0	ID=cds-WP_071588992.1;Parent=gene-PHA55_RS02295;Dbxref=Genbank:WP_071588992.1;Name=WP_071588992.1;gbkey=CDS;gene=nrfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014640253.1;locus_tag=PHA55_RS02295;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_071588992.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	467345	467728	.	+	.	ID=gene-PHA55_RS02300;Name=nrfF;gbkey=Gene;gene=nrfF;gene_biotype=protein_coding;locus_tag=PHA55_RS02300;old_locus_tag=PHA55_02300
NZ_CP116044.1	Protein Homology	CDS	467345	467728	.	+	0	ID=cds-WP_001032546.1;Parent=gene-PHA55_RS02300;Dbxref=Genbank:WP_001032546.1;Name=WP_001032546.1;gbkey=CDS;gene=nrfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418499.1;locus_tag=PHA55_RS02300;product=heme lyase NrfEFG subunit NrfF;protein_id=WP_001032546.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	467725	468321	.	+	.	ID=gene-PHA55_RS02305;Name=nrfG;gbkey=Gene;gene=nrfG;gene_biotype=protein_coding;locus_tag=PHA55_RS02305;old_locus_tag=PHA55_02305
NZ_CP116044.1	Protein Homology	CDS	467725	468321	.	+	0	ID=cds-WP_000662608.1;Parent=gene-PHA55_RS02305;Dbxref=Genbank:WP_000662608.1;Name=WP_000662608.1;gbkey=CDS;gene=nrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709852.1;locus_tag=PHA55_RS02305;product=heme lyase NrfEFG subunit NrfG;protein_id=WP_000662608.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	468663	469976	.	+	.	ID=gene-PHA55_RS02310;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=PHA55_RS02310;old_locus_tag=PHA55_02310
NZ_CP116044.1	Protein Homology	CDS	468663	469976	.	+	0	ID=cds-WP_000835799.1;Parent=gene-PHA55_RS02310;Dbxref=Genbank:WP_000835799.1;Name=WP_000835799.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313086.1;locus_tag=PHA55_RS02310;product=glutamate/aspartate:proton symporter GltP;protein_id=WP_000835799.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	470054	470743	.	-	.	ID=gene-PHA55_RS02315;Name=yjcO;gbkey=Gene;gene=yjcO;gene_biotype=protein_coding;locus_tag=PHA55_RS02315;old_locus_tag=PHA55_02315
NZ_CP116044.1	Protein Homology	CDS	470054	470743	.	-	0	ID=cds-WP_000719886.1;Parent=gene-PHA55_RS02315;Dbxref=Genbank:WP_000719886.1;Name=WP_000719886.1;gbkey=CDS;gene=yjcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313087.1;locus_tag=PHA55_RS02315;product=Sel1 family TPR-like repeat protein YjcO;protein_id=WP_000719886.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	470837	472984	.	-	.	ID=gene-PHA55_RS02320;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=PHA55_RS02320;old_locus_tag=PHA55_02320
NZ_CP116044.1	Protein Homology	CDS	470837	472984	.	-	0	ID=cds-WP_001300547.1;Parent=gene-PHA55_RS02320;Dbxref=Genbank:WP_001300547.1;Name=WP_001300547.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418503.1;locus_tag=PHA55_RS02320;product=formate dehydrogenase subunit alpha;protein_id=WP_001300547.1;transl_except=(pos:complement(472565..472567)%2Caa:Sec);transl_table=11
NZ_CP116044.1	RefSeq	gene	473182	474648	.	-	.	ID=gene-PHA55_RS02325;Name=mdtP;gbkey=Gene;gene=mdtP;gene_biotype=protein_coding;locus_tag=PHA55_RS02325;old_locus_tag=PHA55_02325
NZ_CP116044.1	Protein Homology	CDS	473182	474648	.	-	0	ID=cds-WP_271287496.1;Parent=gene-PHA55_RS02325;Dbxref=Genbank:WP_271287496.1;Name=WP_271287496.1;gbkey=CDS;gene=mdtP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709855.1;locus_tag=PHA55_RS02325;product=multidrug efflux transporter outer membrane subunit MdtP;protein_id=WP_271287496.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	474645	476696	.	-	.	ID=gene-PHA55_RS02330;Name=mdtO;gbkey=Gene;gene=mdtO;gene_biotype=protein_coding;locus_tag=PHA55_RS02330;old_locus_tag=PHA55_02330
NZ_CP116044.1	Protein Homology	CDS	474645	476696	.	-	0	ID=cds-WP_001275144.1;Parent=gene-PHA55_RS02330;Dbxref=Genbank:WP_001275144.1;Name=WP_001275144.1;gbkey=CDS;gene=mdtO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418505.2;locus_tag=PHA55_RS02330;product=multidrug efflux transporter permease subunit MdtO;protein_id=WP_001275144.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	476696	477727	.	-	.	ID=gene-PHA55_RS02335;Name=mdtN;gbkey=Gene;gene=mdtN;gene_biotype=protein_coding;locus_tag=PHA55_RS02335;old_locus_tag=PHA55_02335
NZ_CP116044.1	Protein Homology	CDS	476696	477727	.	-	0	ID=cds-WP_000446348.1;Parent=gene-PHA55_RS02335;Dbxref=Genbank:WP_000446348.1;Name=WP_000446348.1;gbkey=CDS;gene=mdtN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418506.1;locus_tag=PHA55_RS02335;product=multidrug efflux transporter periplasmic adaptor subunit MdtN;protein_id=WP_000446348.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	477746	478021	.	-	.	ID=gene-PHA55_RS02340;Name=ytcA;gbkey=Gene;gene=ytcA;gene_biotype=protein_coding;locus_tag=PHA55_RS02340;old_locus_tag=PHA55_02340
NZ_CP116044.1	Protein Homology	CDS	477746	478021	.	-	0	ID=cds-WP_001297587.1;Parent=gene-PHA55_RS02340;Dbxref=Genbank:WP_001297587.1;Name=WP_001297587.1;gbkey=CDS;gene=ytcA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165334.1;locus_tag=PHA55_RS02340;product=YtcA family lipoprotein;protein_id=WP_001297587.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	478230	480215	.	-	.	ID=gene-PHA55_RS02345;Name=yjcS;gbkey=Gene;gene=yjcS;gene_biotype=protein_coding;locus_tag=PHA55_RS02345;old_locus_tag=PHA55_02345
NZ_CP116044.1	Protein Homology	CDS	478230	480215	.	-	0	ID=cds-WP_001307516.1;Parent=gene-PHA55_RS02345;Dbxref=Genbank:WP_001307516.1;Name=WP_001307516.1;gbkey=CDS;gene=yjcS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418507.2;locus_tag=PHA55_RS02345;product=alkyl sulfatase YjcS;protein_id=WP_001307516.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	480468	480785	.	+	.	ID=gene-PHA55_RS02350;Name=PHA55_RS02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02350;old_locus_tag=PHA55_02350
NZ_CP116044.1	Protein Homology	CDS	480468	480785	.	+	0	ID=cds-WP_001183287.1;Parent=gene-PHA55_RS02350;Dbxref=Genbank:WP_001183287.1;Name=WP_001183287.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001183281.1;locus_tag=PHA55_RS02350;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=WP_001183287.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	480854	481183	.	+	.	ID=gene-PHA55_RS02355;Name=yjdP;gbkey=Gene;gene=yjdP;gene_biotype=protein_coding;locus_tag=PHA55_RS02355;old_locus_tag=PHA55_02355
NZ_CP116044.1	Protein Homology	CDS	480854	481183	.	+	0	ID=cds-WP_000819746.1;Parent=gene-PHA55_RS02355;Dbxref=Genbank:WP_000819746.1;Name=WP_000819746.1;gbkey=CDS;gene=yjdP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026281.1;locus_tag=PHA55_RS02355;product=DDRRRQL repeat protein YjdP;protein_id=WP_000819746.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	481330	482088	.	-	.	ID=gene-PHA55_RS02360;Name=phnP;gbkey=Gene;gene=phnP;gene_biotype=protein_coding;locus_tag=PHA55_RS02360;old_locus_tag=PHA55_02360
NZ_CP116044.1	Protein Homology	CDS	481330	482088	.	-	0	ID=cds-WP_000059927.1;Parent=gene-PHA55_RS02360;Dbxref=Genbank:WP_000059927.1;Name=WP_000059927.1;Ontology_term=GO:0019700,GO:0008081;gbkey=CDS;gene=phnP;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418516.1;locus_tag=PHA55_RS02360;product=phosphonate metabolism protein PhnP;protein_id=WP_000059927.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	482090	482524	.	-	.	ID=gene-PHA55_RS02365;Name=phnO;gbkey=Gene;gene=phnO;gene_biotype=protein_coding;locus_tag=PHA55_RS02365;old_locus_tag=PHA55_02365
NZ_CP116044.1	Protein Homology	CDS	482090	482524	.	-	0	ID=cds-WP_001110494.1;Parent=gene-PHA55_RS02365;Dbxref=Genbank:WP_001110494.1;Name=WP_001110494.1;gbkey=CDS;gene=phnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418517.1;locus_tag=PHA55_RS02365;product=aminoalkylphosphonate N-acetyltransferase;protein_id=WP_001110494.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	482511	483068	.	-	.	ID=gene-PHA55_RS02370;Name=phnN;gbkey=Gene;gene=phnN;gene_biotype=protein_coding;locus_tag=PHA55_RS02370;old_locus_tag=PHA55_02370
NZ_CP116044.1	Protein Homology	CDS	482511	483068	.	-	0	ID=cds-WP_000971891.1;Parent=gene-PHA55_RS02370;Dbxref=Genbank:WP_000971891.1;Name=WP_000971891.1;Ontology_term=GO:0006015,GO:0033863;gbkey=CDS;gene=phnN;go_function=ribose 1%2C5-bisphosphate phosphokinase activity|0033863||IEA;go_process=5-phosphoribose 1-diphosphate biosynthetic process|0006015||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418518.1;locus_tag=PHA55_RS02370;product=ribose 1%2C5-bisphosphokinase;protein_id=WP_000971891.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	483068	484204	.	-	.	ID=gene-PHA55_RS02375;Name=phnM;gbkey=Gene;gene=phnM;gene_biotype=protein_coding;locus_tag=PHA55_RS02375;old_locus_tag=PHA55_02375
NZ_CP116044.1	Protein Homology	CDS	483068	484204	.	-	0	ID=cds-WP_000586301.1;Parent=gene-PHA55_RS02375;Dbxref=Genbank:WP_000586301.1;Name=WP_000586301.1;Ontology_term=GO:0019700,GO:0016810;gbkey=CDS;gene=phnM;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313105.1;locus_tag=PHA55_RS02375;product=alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase;protein_id=WP_000586301.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	484201	484881	.	-	.	ID=gene-PHA55_RS02380;Name=phnL;gbkey=Gene;gene=phnL;gene_biotype=protein_coding;locus_tag=PHA55_RS02380;old_locus_tag=PHA55_02380
NZ_CP116044.1	Protein Homology	CDS	484201	484881	.	-	0	ID=cds-WP_000611404.1;Parent=gene-PHA55_RS02380;Dbxref=Genbank:WP_000611404.1;Name=WP_000611404.1;Ontology_term=GO:0019634,GO:0018835;gbkey=CDS;gene=phnL;go_function=carbon phosphorus lyase activity|0018835||IEA;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418520.1;locus_tag=PHA55_RS02380;product=phosphonate C-P lyase system protein PhnL;protein_id=WP_000611404.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	484762	485037	.	+	.	ID=gene-PHA55_RS02385;Name=PHA55_RS02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02385;old_locus_tag=PHA55_02385
NZ_CP116044.1	GeneMarkS-2+	CDS	484762	485037	.	+	0	ID=cds-WP_162224731.1;Parent=gene-PHA55_RS02385;Dbxref=Genbank:WP_162224731.1;Name=WP_162224731.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA55_RS02385;product=hypothetical protein;protein_id=WP_162224731.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	484992	485750	.	-	.	ID=gene-PHA55_RS02390;Name=phnK;gbkey=Gene;gene=phnK;gene_biotype=protein_coding;locus_tag=PHA55_RS02390;old_locus_tag=PHA55_02390
NZ_CP116044.1	Protein Homology	CDS	484992	485750	.	-	0	ID=cds-WP_001039799.1;Parent=gene-PHA55_RS02390;Dbxref=Genbank:WP_001039799.1;Name=WP_001039799.1;Ontology_term=GO:0019634,GO:0018835;gbkey=CDS;gene=phnK;go_function=carbon phosphorus lyase activity|0018835||IEA;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026282.1;locus_tag=PHA55_RS02390;product=phosphonate C-P lyase system protein PhnK;protein_id=WP_001039799.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	485747	486592	.	-	.	ID=gene-PHA55_RS02395;Name=phnJ;gbkey=Gene;gene=phnJ;gene_biotype=protein_coding;locus_tag=PHA55_RS02395;old_locus_tag=PHA55_02395
NZ_CP116044.1	Protein Homology	CDS	485747	486592	.	-	0	ID=cds-WP_000002299.1;Parent=gene-PHA55_RS02395;Dbxref=Genbank:WP_000002299.1;Name=WP_000002299.1;gbkey=CDS;gene=phnJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313108.1;locus_tag=PHA55_RS02395;product=alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ;protein_id=WP_000002299.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	486585	487649	.	-	.	ID=gene-PHA55_RS02400;Name=phnI;gbkey=Gene;gene=phnI;gene_biotype=protein_coding;locus_tag=PHA55_RS02400;old_locus_tag=PHA55_02400
NZ_CP116044.1	Protein Homology	CDS	486585	487649	.	-	0	ID=cds-WP_001331312.1;Parent=gene-PHA55_RS02400;Dbxref=Genbank:WP_001331312.1;Name=WP_001331312.1;gbkey=CDS;gene=phnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313109.1;locus_tag=PHA55_RS02400;product=alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI;protein_id=WP_001331312.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	487649	488233	.	-	.	ID=gene-PHA55_RS02405;Name=phnH;gbkey=Gene;gene=phnH;gene_biotype=protein_coding;locus_tag=PHA55_RS02405;old_locus_tag=PHA55_02405
NZ_CP116044.1	Protein Homology	CDS	487649	488233	.	-	0	ID=cds-WP_000171588.1;Parent=gene-PHA55_RS02405;Dbxref=Genbank:WP_000171588.1;Name=WP_000171588.1;Ontology_term=GO:0019634;gbkey=CDS;gene=phnH;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313110.1;locus_tag=PHA55_RS02405;product=phosphonate C-P lyase system protein PhnH;protein_id=WP_000171588.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	488230	488682	.	-	.	ID=gene-PHA55_RS02410;Name=phnG;gbkey=Gene;gene=phnG;gene_biotype=protein_coding;locus_tag=PHA55_RS02410;old_locus_tag=PHA55_02410
NZ_CP116044.1	Protein Homology	CDS	488230	488682	.	-	0	ID=cds-WP_000542796.1;Parent=gene-PHA55_RS02410;Dbxref=Genbank:WP_000542796.1;Name=WP_000542796.1;Ontology_term=GO:0015716,GO:0019634;gbkey=CDS;gene=phnG;go_process=organic phosphonate transport|0015716||IEA,organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418525.1;locus_tag=PHA55_RS02410;product=phosphonate C-P lyase system protein PhnG;protein_id=WP_000542796.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	488683	489408	.	-	.	ID=gene-PHA55_RS02415;Name=phnF;gbkey=Gene;gene=phnF;gene_biotype=protein_coding;locus_tag=PHA55_RS02415;old_locus_tag=PHA55_02415
NZ_CP116044.1	Protein Homology	CDS	488683	489408	.	-	0	ID=cds-WP_001301447.1;Parent=gene-PHA55_RS02415;Dbxref=Genbank:WP_001301447.1;Name=WP_001301447.1;gbkey=CDS;gene=phnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313112.1;locus_tag=PHA55_RS02415;product=phosphonate metabolism transcriptional regulator PhnF;protein_id=WP_001301447.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	489429	490208	.	-	.	ID=gene-PHA55_RS02420;Name=phnE;gbkey=Gene;gene=phnE;gene_biotype=protein_coding;locus_tag=PHA55_RS02420;old_locus_tag=PHA55_02420
NZ_CP116044.1	Protein Homology	CDS	489429	490208	.	-	0	ID=cds-WP_001193509.1;Parent=gene-PHA55_RS02420;Dbxref=Genbank:WP_001193509.1;Name=WP_001193509.1;Ontology_term=GO:0015716,GO:0015416,GO:0005886,GO:0055052;gbkey=CDS;gene=phnE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313113.2;locus_tag=PHA55_RS02420;product=phosphonate ABC transporter%2C permease protein PhnE;protein_id=WP_001193509.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	490270	491286	.	-	.	ID=gene-PHA55_RS02425;Name=phnD;gbkey=Gene;gene=phnD;gene_biotype=protein_coding;locus_tag=PHA55_RS02425;old_locus_tag=PHA55_02425
NZ_CP116044.1	Protein Homology	CDS	490270	491286	.	-	0	ID=cds-WP_000991990.1;Parent=gene-PHA55_RS02425;Dbxref=Genbank:WP_000991990.1;Name=WP_000991990.1;Ontology_term=GO:0015716,GO:0043190;gbkey=CDS;gene=phnD;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418529.1;locus_tag=PHA55_RS02425;product=phosphonate ABC transporter substrate-binding protein;protein_id=WP_000991990.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	491311	492099	.	-	.	ID=gene-PHA55_RS02430;Name=phnC;gbkey=Gene;gene=phnC;gene_biotype=protein_coding;locus_tag=PHA55_RS02430;old_locus_tag=PHA55_02430
NZ_CP116044.1	Protein Homology	CDS	491311	492099	.	-	0	ID=cds-WP_001193391.1;Parent=gene-PHA55_RS02430;Dbxref=Genbank:WP_001193391.1;Name=WP_001193391.1;gbkey=CDS;gene=phnC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709835.2;locus_tag=PHA55_RS02430;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_001193391.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	492232	492675	.	-	.	ID=gene-PHA55_RS02435;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=PHA55_RS02435;old_locus_tag=PHA55_02435
NZ_CP116044.1	Protein Homology	CDS	492232	492675	.	-	0	ID=cds-WP_001131322.1;Parent=gene-PHA55_RS02435;Dbxref=Genbank:WP_001131322.1;Name=WP_001131322.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418531.1;locus_tag=PHA55_RS02435;product=VOC family metalloprotein YjdN;protein_id=WP_001131322.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	492835	493170	.	-	.	ID=gene-PHA55_RS02440;Name=yjdM;gbkey=Gene;gene=yjdM;gene_biotype=protein_coding;locus_tag=PHA55_RS02440;old_locus_tag=PHA55_02440
NZ_CP116044.1	Protein Homology	CDS	492835	493170	.	-	0	ID=cds-WP_001300891.1;Parent=gene-PHA55_RS02440;Dbxref=Genbank:WP_001300891.1;Name=WP_001300891.1;gbkey=CDS;gene=yjdM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313117.1;locus_tag=PHA55_RS02440;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_001300891.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	493572	495800	.	+	.	ID=gene-PHA55_RS02445;Name=crfC;gbkey=Gene;gene=crfC;gene_biotype=protein_coding;locus_tag=PHA55_RS02445;old_locus_tag=PHA55_02445
NZ_CP116044.1	Protein Homology	CDS	493572	495800	.	+	0	ID=cds-WP_000288588.1;Parent=gene-PHA55_RS02445;Dbxref=Genbank:WP_000288588.1;Name=WP_000288588.1;Ontology_term=GO:0005525;gbkey=CDS;gene=crfC;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418533.1;locus_tag=PHA55_RS02445;product=clamp-binding protein CrfC;protein_id=WP_000288588.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	495797	496675	.	+	.	ID=gene-PHA55_RS02450;Name=rdcB;gbkey=Gene;gene=rdcB;gene_biotype=protein_coding;locus_tag=PHA55_RS02450;old_locus_tag=PHA55_02450
NZ_CP116044.1	Protein Homology	CDS	495797	496675	.	+	0	ID=cds-WP_024207814.1;Parent=gene-PHA55_RS02450;Dbxref=Genbank:WP_024207814.1;Name=WP_024207814.1;gbkey=CDS;gene=rdcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418534.4;locus_tag=PHA55_RS02450;product=YjcZ-like family protein;protein_id=WP_024207814.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	496939	498441	.	+	.	ID=gene-PHA55_RS02455;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=PHA55_RS02455;old_locus_tag=PHA55_02455
NZ_CP116044.1	Protein Homology	CDS	496939	498441	.	+	0	ID=cds-WP_001296882.1;Parent=gene-PHA55_RS02455;Dbxref=Genbank:WP_001296882.1;Name=WP_001296882.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709830.2;locus_tag=PHA55_RS02455;product=glycine betaine/L-proline transporter ProP;protein_id=WP_001296882.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	498553	498642	.	+	.	ID=gene-PHA55_RS02460;Name=pmrR;gbkey=Gene;gene=pmrR;gene_biotype=protein_coding;locus_tag=PHA55_RS02460;old_locus_tag=PHA55_02460
NZ_CP116044.1	Protein Homology	CDS	498553	498642	.	+	0	ID=cds-WP_000797656.1;Parent=gene-PHA55_RS02460;Dbxref=Genbank:WP_000797656.1;Name=WP_000797656.1;gbkey=CDS;gene=pmrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000797656.1;locus_tag=PHA55_RS02460;product=LpxT activity modulator PmrR;protein_id=WP_000797656.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	498618	499718	.	-	.	ID=gene-PHA55_RS02465;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=PHA55_RS02465;old_locus_tag=PHA55_02465
NZ_CP116044.1	Protein Homology	CDS	498618	499718	.	-	0	ID=cds-WP_001051093.1;Parent=gene-PHA55_RS02465;Dbxref=Genbank:WP_001051093.1;Name=WP_001051093.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709829.1;locus_tag=PHA55_RS02465;product=two-component system sensor histidine kinase PmrB;protein_id=WP_001051093.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	499719	500387	.	-	.	ID=gene-PHA55_RS02470;Name=basR;gbkey=Gene;gene=basR;gene_biotype=protein_coding;locus_tag=PHA55_RS02470;old_locus_tag=PHA55_02470
NZ_CP116044.1	Protein Homology	CDS	499719	500387	.	-	0	ID=cds-WP_000697919.1;Parent=gene-PHA55_RS02470;Dbxref=Genbank:WP_000697919.1;Name=WP_000697919.1;gbkey=CDS;gene=basR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313122.1;locus_tag=PHA55_RS02470;product=two-component system response regulator BasR;protein_id=WP_000697919.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	500384	502027	.	-	.	ID=gene-PHA55_RS02475;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=PHA55_RS02475;old_locus_tag=PHA55_02475
NZ_CP116044.1	Protein Homology	CDS	500384	502027	.	-	0	ID=cds-WP_001298860.1;Parent=gene-PHA55_RS02475;Dbxref=Genbank:WP_001298860.1;Name=WP_001298860.1;Ontology_term=GO:0016772;gbkey=CDS;gene=eptA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418538.2;locus_tag=PHA55_RS02475;product=phosphoethanolamine transferase EptA;protein_id=WP_001298860.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	502131	503468	.	-	.	ID=gene-PHA55_RS02480;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=protein_coding;locus_tag=PHA55_RS02480;old_locus_tag=PHA55_02480
NZ_CP116044.1	Protein Homology	CDS	502131	503468	.	-	0	ID=cds-WP_000093154.1;Parent=gene-PHA55_RS02480;Dbxref=Genbank:WP_000093154.1;Name=WP_000093154.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=adiC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313124.1;locus_tag=PHA55_RS02480;product=arginine/agmatine antiporter;protein_id=WP_000093154.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	503605	504366	.	-	.	ID=gene-PHA55_RS02485;Name=adiY;gbkey=Gene;gene=adiY;gene_biotype=protein_coding;locus_tag=PHA55_RS02485;old_locus_tag=PHA55_02485
NZ_CP116044.1	Protein Homology	CDS	503605	504366	.	-	0	ID=cds-WP_001217059.1;Parent=gene-PHA55_RS02485;Dbxref=Genbank:WP_001217059.1;Name=WP_001217059.1;gbkey=CDS;gene=adiY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313125.1;locus_tag=PHA55_RS02485;product=DNA-binding transcriptional activator AdiY;protein_id=WP_001217059.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	504691	506958	.	-	.	ID=gene-PHA55_RS02490;Name=adiA;gbkey=Gene;gene=adiA;gene_biotype=protein_coding;locus_tag=PHA55_RS02490;old_locus_tag=PHA55_02490
NZ_CP116044.1	Protein Homology	CDS	504691	506958	.	-	0	ID=cds-WP_001307519.1;Parent=gene-PHA55_RS02490;Dbxref=Genbank:WP_001307519.1;Name=WP_001307519.1;Ontology_term=GO:0006520,GO:0016831;gbkey=CDS;gene=adiA;go_function=carboxy-lyase activity|0016831||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418541.2;locus_tag=PHA55_RS02490;product=arginine decarboxylase;protein_id=WP_001307519.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	507157	508065	.	-	.	ID=gene-PHA55_RS02495;Name=melR;gbkey=Gene;gene=melR;gene_biotype=protein_coding;locus_tag=PHA55_RS02495;old_locus_tag=PHA55_02495
NZ_CP116044.1	Protein Homology	CDS	507157	508065	.	-	0	ID=cds-WP_001090758.1;Parent=gene-PHA55_RS02495;Dbxref=Genbank:WP_001090758.1;Name=WP_001090758.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=melR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418542.1;locus_tag=PHA55_RS02495;product=transcriptional regulator MelR;protein_id=WP_001090758.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	508348	509703	.	+	.	ID=gene-PHA55_RS02500;Name=melA;gbkey=Gene;gene=melA;gene_biotype=protein_coding;locus_tag=PHA55_RS02500;old_locus_tag=PHA55_02500
NZ_CP116044.1	Protein Homology	CDS	508348	509703	.	+	0	ID=cds-WP_000988031.1;Parent=gene-PHA55_RS02500;Dbxref=Genbank:WP_000988031.1;Name=WP_000988031.1;gbkey=CDS;gene=melA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313128.1;locus_tag=PHA55_RS02500;product=alpha-galactosidase;protein_id=WP_000988031.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	509806	511227	.	+	.	ID=gene-PHA55_RS02505;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=PHA55_RS02505;old_locus_tag=PHA55_02505
NZ_CP116044.1	Protein Homology	CDS	509806	511227	.	+	0	ID=cds-WP_000028114.1;Parent=gene-PHA55_RS02505;Dbxref=Genbank:WP_000028114.1;Name=WP_000028114.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;gene=melB;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418544.2;locus_tag=PHA55_RS02505;product=melibiose:sodium transporter MelB;protein_id=WP_000028114.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	511366	511995	.	-	.	ID=gene-PHA55_RS02510;Name=yjdF;gbkey=Gene;gene=yjdF;gene_biotype=protein_coding;locus_tag=PHA55_RS02510;old_locus_tag=PHA55_02510
NZ_CP116044.1	Protein Homology	CDS	511366	511995	.	-	0	ID=cds-WP_000198752.1;Parent=gene-PHA55_RS02510;Dbxref=Genbank:WP_000198752.1;Name=WP_000198752.1;gbkey=CDS;gene=yjdF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313130.1;locus_tag=PHA55_RS02510;product=DUF2238 domain-containing protein;protein_id=WP_000198752.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	512118	513764	.	-	.	ID=gene-PHA55_RS02515;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=PHA55_RS02515;old_locus_tag=PHA55_02515
NZ_CP116044.1	Protein Homology	CDS	512118	513764	.	-	0	ID=cds-WP_000066678.1;Parent=gene-PHA55_RS02515;Dbxref=Genbank:WP_000066678.1;Name=WP_000066678.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418546.1;locus_tag=PHA55_RS02515;product=class I fumarate hydratase;protein_id=WP_000066678.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	513842	515182	.	-	.	ID=gene-PHA55_RS02520;Name=dcuB;gbkey=Gene;gene=dcuB;gene_biotype=protein_coding;locus_tag=PHA55_RS02520;old_locus_tag=PHA55_02520
NZ_CP116044.1	Protein Homology	CDS	513842	515182	.	-	0	ID=cds-WP_000899522.1;Parent=gene-PHA55_RS02520;Dbxref=Genbank:WP_000899522.1;Name=WP_000899522.1;gbkey=CDS;gene=dcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313132.1;locus_tag=PHA55_RS02520;product=anaerobic C4-dicarboxylate transporter DcuB;protein_id=WP_000899522.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	515753	516472	.	-	.	ID=gene-PHA55_RS02525;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=PHA55_RS02525;old_locus_tag=PHA55_02525
NZ_CP116044.1	Protein Homology	CDS	515753	516472	.	-	0	ID=cds-WP_000611288.1;Parent=gene-PHA55_RS02525;Dbxref=Genbank:WP_000611288.1;Name=WP_000611288.1;Ontology_term=GO:0000160,GO:0003700;gbkey=CDS;gene=dcuR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313133.1;locus_tag=PHA55_RS02525;product=two-component system response regulator DcuR;protein_id=WP_000611288.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	516469	518100	.	-	.	ID=gene-PHA55_RS02530;Name=dcuS;gbkey=Gene;gene=dcuS;gene_biotype=protein_coding;locus_tag=PHA55_RS02530;old_locus_tag=PHA55_02530
NZ_CP116044.1	Protein Homology	CDS	516469	518100	.	-	0	ID=cds-WP_001216460.1;Parent=gene-PHA55_RS02530;Dbxref=Genbank:WP_001216460.1;Name=WP_001216460.1;gbkey=CDS;gene=dcuS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313134.1;locus_tag=PHA55_RS02530;product=sensor histidine kinase;protein_id=WP_001216460.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	518281	518511	.	+	.	ID=gene-PHA55_RS02535;Name=yjdI;gbkey=Gene;gene=yjdI;gene_biotype=protein_coding;locus_tag=PHA55_RS02535;old_locus_tag=PHA55_02535
NZ_CP116044.1	Protein Homology	CDS	518281	518511	.	+	0	ID=cds-WP_000371698.1;Parent=gene-PHA55_RS02535;Dbxref=Genbank:WP_000371698.1;Name=WP_000371698.1;gbkey=CDS;gene=yjdI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313135.1;locus_tag=PHA55_RS02535;product=4Fe-4S mono-cluster protein YjdI;protein_id=WP_000371698.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	518523	518795	.	+	.	ID=gene-PHA55_RS02540;Name=yjdJ;gbkey=Gene;gene=yjdJ;gene_biotype=protein_coding;locus_tag=PHA55_RS02540;old_locus_tag=PHA55_02540
NZ_CP116044.1	Protein Homology	CDS	518523	518795	.	+	0	ID=cds-WP_000405647.1;Parent=gene-PHA55_RS02540;Dbxref=Genbank:WP_000405647.1;Name=WP_000405647.1;gbkey=CDS;gene=yjdJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313136.1;locus_tag=PHA55_RS02540;product=GNAT family N-acetyltransferase;protein_id=WP_000405647.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	519022	519318	.	+	.	ID=gene-PHA55_RS02545;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=PHA55_RS02545;old_locus_tag=PHA55_02545
NZ_CP116044.1	Protein Homology	CDS	519022	519318	.	+	0	ID=cds-WP_000398619.1;Parent=gene-PHA55_RS02545;Dbxref=Genbank:WP_000398619.1;Name=WP_000398619.1;gbkey=CDS;gene=ghoS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313137.1;locus_tag=PHA55_RS02545;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_000398619.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	519346	519519	.	+	.	ID=gene-PHA55_RS02550;Name=ghoT;gbkey=Gene;gene=ghoT;gene_biotype=protein_coding;locus_tag=PHA55_RS02550;old_locus_tag=PHA55_02550
NZ_CP116044.1	Protein Homology	CDS	519346	519519	.	+	0	ID=cds-WP_001173343.1;Parent=gene-PHA55_RS02550;Dbxref=Genbank:WP_001173343.1;Name=WP_001173343.1;gbkey=CDS;gene=ghoT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588474.1;locus_tag=PHA55_RS02550;product=type V toxin-antitoxin system toxin GhoT;protein_id=WP_001173343.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	519638	521155	.	-	.	ID=gene-PHA55_RS02555;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=PHA55_RS02555;old_locus_tag=PHA55_02555
NZ_CP116044.1	Protein Homology	CDS	519638	521155	.	-	0	ID=cds-WP_001295074.1;Parent=gene-PHA55_RS02555;Dbxref=Genbank:WP_001295074.1;Name=WP_001295074.1;Ontology_term=GO:0006430,GO:0004824,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=PHA55_RS02555;product=lysine--tRNA ligase;protein_id=WP_001295074.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	521392	522849	.	-	.	ID=gene-PHA55_RS02560;Name=dtpC;gbkey=Gene;gene=dtpC;gene_biotype=protein_coding;locus_tag=PHA55_RS02560;old_locus_tag=PHA55_02560
NZ_CP116044.1	Protein Homology	CDS	521392	522849	.	-	0	ID=cds-WP_000856829.1;Parent=gene-PHA55_RS02560;Dbxref=Genbank:WP_000856829.1;Name=WP_000856829.1;gbkey=CDS;gene=dtpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418554.1;locus_tag=PHA55_RS02560;product=dipeptide/tripeptide permease DtpC;protein_id=WP_000856829.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	522908	525055	.	-	.	ID=gene-PHA55_RS02565;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=PHA55_RS02565;old_locus_tag=PHA55_02565
NZ_CP116044.1	Protein Homology	CDS	522908	525055	.	-	0	ID=cds-WP_001295383.1;Parent=gene-PHA55_RS02565;Dbxref=Genbank:WP_001295383.1;Name=WP_001295383.1;gbkey=CDS;gene=cadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313140.1;locus_tag=PHA55_RS02565;product=lysine decarboxylase CadA;protein_id=WP_001295383.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	525135	526469	.	-	.	ID=gene-PHA55_RS02570;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;locus_tag=PHA55_RS02570;old_locus_tag=PHA55_02570
NZ_CP116044.1	Protein Homology	CDS	525135	526469	.	-	0	ID=cds-WP_000092909.1;Parent=gene-PHA55_RS02570;Dbxref=Genbank:WP_000092909.1;Name=WP_000092909.1;Ontology_term=GO:0043872;gbkey=CDS;gene=cadB;go_function=lysine:cadaverine antiporter activity|0043872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313141.1;locus_tag=PHA55_RS02570;product=cadaverine/lysine antiporter;protein_id=WP_000092909.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	526835	528373	.	-	.	ID=gene-PHA55_RS02575;Name=cadC;gbkey=Gene;gene=cadC;gene_biotype=protein_coding;locus_tag=PHA55_RS02575;old_locus_tag=PHA55_02575
NZ_CP116044.1	Protein Homology	CDS	526835	528373	.	-	0	ID=cds-WP_001187182.1;Parent=gene-PHA55_RS02575;Dbxref=Genbank:WP_001187182.1;Name=WP_001187182.1;gbkey=CDS;gene=cadC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313142.1;locus_tag=PHA55_RS02575;product=lysine decarboxylation/transport transcriptional activator CadC;protein_id=WP_001187182.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	528990	529065	.	-	.	ID=gene-PHA55_RS02580;Name=PHA55_RS02580;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS02580;old_locus_tag=PHA55_02580
NZ_CP116044.1	tRNAscan-SE	tRNA	528990	529065	.	-	.	ID=rna-PHA55_RS02580;Parent=gene-PHA55_RS02580;anticodon=(pos:complement(529030..529032));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS02580;product=tRNA-Phe
NZ_CP116044.1	tRNAscan-SE	exon	528990	529065	.	-	.	ID=exon-PHA55_RS02580-1;Parent=rna-PHA55_RS02580;anticodon=(pos:complement(529030..529032));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS02580;product=tRNA-Phe
NZ_CP116044.1	RefSeq	gene	529172	529747	.	-	.	ID=gene-PHA55_RS02585;Name=yjdC;gbkey=Gene;gene=yjdC;gene_biotype=protein_coding;locus_tag=PHA55_RS02585;old_locus_tag=PHA55_02585
NZ_CP116044.1	Protein Homology	CDS	529172	529747	.	-	0	ID=cds-WP_001188520.1;Parent=gene-PHA55_RS02585;Dbxref=Genbank:WP_001188520.1;Name=WP_001188520.1;Ontology_term=GO:0003677;gbkey=CDS;gene=yjdC;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710000.1;locus_tag=PHA55_RS02585;product=transcriptional regulator;protein_id=WP_001188520.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	529784	531481	.	-	.	ID=gene-PHA55_RS02590;Name=dsbD;gbkey=Gene;gene=dsbD;gene_biotype=protein_coding;locus_tag=PHA55_RS02590;old_locus_tag=PHA55_02590
NZ_CP116044.1	Protein Homology	CDS	529784	531481	.	-	0	ID=cds-WP_000068978.1;Parent=gene-PHA55_RS02590;Dbxref=Genbank:WP_000068978.1;Name=WP_000068978.1;gbkey=CDS;gene=dsbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710001.1;locus_tag=PHA55_RS02590;product=protein-disulfide reductase DsbD;protein_id=WP_000068978.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	531457	531795	.	-	.	ID=gene-PHA55_RS02595;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=PHA55_RS02595;old_locus_tag=PHA55_02595
NZ_CP116044.1	Protein Homology	CDS	531457	531795	.	-	0	ID=cds-WP_000883400.1;Parent=gene-PHA55_RS02595;Dbxref=Genbank:WP_000883400.1;Name=WP_000883400.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313145.1;locus_tag=PHA55_RS02595;product=divalent cation tolerance protein CutA;protein_id=WP_000883400.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	531911	533212	.	-	.	ID=gene-PHA55_RS02600;Name=dcuA;gbkey=Gene;gene=dcuA;gene_biotype=protein_coding;locus_tag=PHA55_RS02600;old_locus_tag=PHA55_02600
NZ_CP116044.1	Protein Homology	CDS	531911	533212	.	-	0	ID=cds-WP_000961959.1;Parent=gene-PHA55_RS02600;Dbxref=Genbank:WP_000961959.1;Name=WP_000961959.1;gbkey=CDS;gene=dcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313146.1;locus_tag=PHA55_RS02600;product=anaerobic C4-dicarboxylate transporter DcuA;protein_id=WP_000961959.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	533330	534766	.	-	.	ID=gene-PHA55_RS02605;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=PHA55_RS02605;old_locus_tag=PHA55_02605
NZ_CP116044.1	Protein Homology	CDS	533330	534766	.	-	0	ID=cds-WP_000069437.1;Parent=gene-PHA55_RS02605;Dbxref=Genbank:WP_000069437.1;Name=WP_000069437.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313147.2;locus_tag=PHA55_RS02605;product=aspartate ammonia-lyase;protein_id=WP_000069437.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	535103	535579	.	+	.	ID=gene-PHA55_RS02610;Name=fxsA;gbkey=Gene;gene=fxsA;gene_biotype=protein_coding;locus_tag=PHA55_RS02610;old_locus_tag=PHA55_02610
NZ_CP116044.1	Protein Homology	CDS	535103	535579	.	+	0	ID=cds-WP_001267448.1;Parent=gene-PHA55_RS02610;Dbxref=Genbank:WP_001267448.1;Name=WP_001267448.1;gbkey=CDS;gene=fxsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418564.2;locus_tag=PHA55_RS02610;product=membrane protein FxsA;protein_id=WP_001267448.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	535595	536851	.	-	.	ID=gene-PHA55_RS02615;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=protein_coding;locus_tag=PHA55_RS02615;old_locus_tag=PHA55_02615
NZ_CP116044.1	Protein Homology	CDS	535595	536851	.	-	0	ID=cds-WP_000015837.1;Parent=gene-PHA55_RS02615;Dbxref=Genbank:WP_000015837.1;Name=WP_000015837.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjeH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418565.1;locus_tag=PHA55_RS02615;product=L-methionine/branched-chain amino acid transporter;protein_id=WP_000015837.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	537127	537420	.	+	.	ID=gene-PHA55_RS02620;Name=groS;gbkey=Gene;gene=groS;gene_biotype=protein_coding;locus_tag=PHA55_RS02620;old_locus_tag=PHA55_02620
NZ_CP116044.1	Protein Homology	CDS	537127	537420	.	+	0	ID=cds-WP_001026276.1;Parent=gene-PHA55_RS02620;Dbxref=Genbank:WP_001026276.1;Name=WP_001026276.1;gbkey=CDS;gene=groS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=PHA55_RS02620;product=co-chaperone GroES;protein_id=WP_001026276.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	537464	539110	.	+	.	ID=gene-PHA55_RS02625;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=PHA55_RS02625;old_locus_tag=PHA55_02625
NZ_CP116044.1	Protein Homology	CDS	537464	539110	.	+	0	ID=cds-WP_000729117.1;Parent=gene-PHA55_RS02625;Dbxref=Genbank:WP_000729117.1;Name=WP_000729117.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0006457,GO:0005515,GO:0016887;gbkey=CDS;gene=groL;go_function=protein binding|0005515||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=PHA55_RS02625;product=chaperonin GroEL;protein_id=WP_000729117.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	539248	539601	.	+	.	ID=gene-PHA55_RS02630;Name=yjeI;gbkey=Gene;gene=yjeI;gene_biotype=protein_coding;locus_tag=PHA55_RS02630;old_locus_tag=PHA55_02630
NZ_CP116044.1	Protein Homology	CDS	539248	539601	.	+	0	ID=cds-WP_000558209.1;Parent=gene-PHA55_RS02630;Dbxref=Genbank:WP_000558209.1;Name=WP_000558209.1;gbkey=CDS;gene=yjeI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418568.2;locus_tag=PHA55_RS02630;product=DUF4156 domain-containing protein;protein_id=WP_000558209.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	539651	540520	.	-	.	ID=gene-PHA55_RS02635;Name=yjeJ;gbkey=Gene;gene=yjeJ;gene_biotype=protein_coding;locus_tag=PHA55_RS02635;old_locus_tag=PHA55_02635
NZ_CP116044.1	Protein Homology	CDS	539651	540520	.	-	0	ID=cds-WP_001008071.1;Parent=gene-PHA55_RS02635;Dbxref=Genbank:WP_001008071.1;Name=WP_001008071.1;gbkey=CDS;gene=yjeJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710010.2;locus_tag=PHA55_RS02635;product=YjeJ family protein;protein_id=WP_001008071.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	540910	541938	.	-	.	ID=gene-PHA55_RS02640;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=PHA55_RS02640;old_locus_tag=PHA55_02640
NZ_CP116044.1	Protein Homology	CDS	540910	541938	.	-	0	ID=cds-WP_001722070.1;Parent=gene-PHA55_RS02640;Dbxref=Genbank:WP_001722070.1;Name=WP_001722070.1;Ontology_term=GO:0072581;gbkey=CDS;gene=epmB;go_process=protein-N6-(L-lysyl)-L-lysine modification to protein-N6-(beta-lysyl)-L-lysine|0072581||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710013.1;locus_tag=PHA55_RS02640;product=EF-P beta-lysylation protein EpmB;protein_id=WP_001722070.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	541980	542546	.	+	.	ID=gene-PHA55_RS02645;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=PHA55_RS02645;old_locus_tag=PHA55_02645
NZ_CP116044.1	Protein Homology	CDS	541980	542546	.	+	0	ID=cds-WP_000257278.1;Parent=gene-PHA55_RS02645;Dbxref=Genbank:WP_000257278.1;Name=WP_000257278.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=PHA55_RS02645;product=elongation factor P;protein_id=WP_000257278.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	542598	542723	.	+	.	ID=gene-PHA55_RS02650;Name=ecnA;gbkey=Gene;gene=ecnA;gene_biotype=protein_coding;locus_tag=PHA55_RS02650;old_locus_tag=PHA55_02650
NZ_CP116044.1	Protein Homology	CDS	542598	542723	.	+	0	ID=cds-WP_000977757.1;Parent=gene-PHA55_RS02650;Dbxref=Genbank:WP_000977757.1;Name=WP_000977757.1;gbkey=CDS;gene=ecnA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026283.1;locus_tag=PHA55_RS02650;product=lipoprotein antitoxin entericidin A;protein_id=WP_000977757.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	542834	542980	.	+	.	ID=gene-PHA55_RS02655;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;locus_tag=PHA55_RS02655;old_locus_tag=PHA55_02655
NZ_CP116044.1	Protein Homology	CDS	542834	542980	.	+	0	ID=cds-WP_000239596.1;Parent=gene-PHA55_RS02655;Dbxref=Genbank:WP_000239596.1;Name=WP_000239596.1;gbkey=CDS;gene=ecnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710016.1;locus_tag=PHA55_RS02655;product=lipoprotein toxin entericidin B;protein_id=WP_000239596.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	543162	543479	.	+	.	ID=gene-PHA55_RS02660;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=PHA55_RS02660;old_locus_tag=PHA55_02660
NZ_CP116044.1	Protein Homology	CDS	543162	543479	.	+	0	ID=cds-WP_000118482.1;Parent=gene-PHA55_RS02660;Dbxref=Genbank:WP_000118482.1;Name=WP_000118482.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418572.4;locus_tag=PHA55_RS02660;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WP_000118482.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	543476	544009	.	-	.	ID=gene-PHA55_RS02665;Name=blc;gbkey=Gene;gene=blc;gene_biotype=protein_coding;locus_tag=PHA55_RS02665;old_locus_tag=PHA55_02665
NZ_CP116044.1	Protein Homology	CDS	543476	544009	.	-	0	ID=cds-WP_001238378.1;Parent=gene-PHA55_RS02665;Dbxref=Genbank:WP_001238378.1;Name=WP_001238378.1;gbkey=CDS;gene=blc;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313157.1;locus_tag=PHA55_RS02665;product=lipocalin Blc;protein_id=WP_001238378.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	544098	545231	.	-	.	ID=gene-PHA55_RS02670;Name=ampC;gbkey=Gene;gene=ampC;gene_biotype=protein_coding;locus_tag=PHA55_RS02670;old_locus_tag=PHA55_02670
NZ_CP116044.1	Protein Homology	CDS	544098	545231	.	-	0	ID=cds-WP_001379408.1;Parent=gene-PHA55_RS02670;Dbxref=Genbank:WP_001379408.1;Name=WP_001379408.1;gbkey=CDS;gene=ampC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001336292.1;locus_tag=PHA55_RS02670;product=BlaEC family class C beta-lactamase;protein_id=WP_001379408.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	545294	545653	.	-	.	ID=gene-PHA55_RS02675;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=PHA55_RS02675;old_locus_tag=PHA55_02675
NZ_CP116044.1	Protein Homology	CDS	545294	545653	.	-	0	ID=cds-WP_001299198.1;Parent=gene-PHA55_RS02675;Dbxref=Genbank:WP_001299198.1;Name=WP_001299198.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313159.1;locus_tag=PHA55_RS02675;product=fumarate reductase subunit FrdD;protein_id=WP_001299198.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	545664	546059	.	-	.	ID=gene-PHA55_RS02680;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=PHA55_RS02680;old_locus_tag=PHA55_02680
NZ_CP116044.1	Protein Homology	CDS	545664	546059	.	-	0	ID=cds-WP_000208757.1;Parent=gene-PHA55_RS02680;Dbxref=Genbank:WP_000208757.1;Name=WP_000208757.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313160.1;locus_tag=PHA55_RS02680;product=fumarate reductase subunit FrdC;protein_id=WP_000208757.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	546070	546804	.	-	.	ID=gene-PHA55_RS02685;Name=frdB;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;locus_tag=PHA55_RS02685;old_locus_tag=PHA55_02685
NZ_CP116044.1	Protein Homology	CDS	546070	546804	.	-	0	ID=cds-WP_000829498.1;Parent=gene-PHA55_RS02685;Dbxref=Genbank:WP_000829498.1;Name=WP_000829498.1;gbkey=CDS;gene=frdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=PHA55_RS02685;product=fumarate reductase iron-sulfur protein;protein_id=WP_000829498.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	546797	548605	.	-	.	ID=gene-PHA55_RS02690;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=PHA55_RS02690;old_locus_tag=PHA55_02690
NZ_CP116044.1	Protein Homology	CDS	546797	548605	.	-	0	ID=cds-WP_001192973.1;Parent=gene-PHA55_RS02690;Dbxref=Genbank:WP_001192973.1;Name=WP_001192973.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418578.1;locus_tag=PHA55_RS02690;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_001192973.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	548930	549907	.	+	.	ID=gene-PHA55_RS02695;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=PHA55_RS02695;old_locus_tag=PHA55_02695
NZ_CP116044.1	Protein Homology	CDS	548930	549907	.	+	0	ID=cds-WP_000004770.1;Parent=gene-PHA55_RS02695;Dbxref=Genbank:WP_000004770.1;Name=WP_000004770.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=PHA55_RS02695;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_000004770.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	550126	551628	.	+	.	ID=gene-PHA55_RS02700;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=PHA55_RS02700;old_locus_tag=PHA55_02700
NZ_CP116044.1	Protein Homology	CDS	550126	551628	.	+	0	ID=cds-WP_001339478.1;Parent=gene-PHA55_RS02700;Dbxref=Genbank:WP_001339478.1;Name=WP_001339478.1;Ontology_term=GO:0022857;gbkey=CDS;gene=yjeM;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418580.2;locus_tag=PHA55_RS02700;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=WP_001339478.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	551779	555102	.	-	.	ID=gene-PHA55_RS02705;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=PHA55_RS02705;old_locus_tag=PHA55_02705
NZ_CP116044.1	Protein Homology	CDS	551779	555102	.	-	0	ID=cds-WP_001236847.1;Parent=gene-PHA55_RS02705;Dbxref=Genbank:WP_001236847.1;Name=WP_001236847.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418583.1;locus_tag=PHA55_RS02705;product=miniconductance mechanosensitive channel MscM;protein_id=WP_001236847.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	555124	556092	.	-	.	ID=gene-PHA55_RS02710;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=PHA55_RS02710;old_locus_tag=PHA55_02710
NZ_CP116044.1	Protein Homology	CDS	555124	556092	.	-	0	ID=cds-WP_000934920.1;Parent=gene-PHA55_RS02710;Dbxref=Genbank:WP_000934920.1;Name=WP_000934920.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313166.1;locus_tag=PHA55_RS02710;product=archaetidylserine decarboxylase;protein_id=WP_000934920.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	556189	557241	.	-	.	ID=gene-PHA55_RS02715;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=PHA55_RS02715;old_locus_tag=PHA55_02715
NZ_CP116044.1	Protein Homology	CDS	556189	557241	.	-	0	ID=cds-WP_000041970.1;Parent=gene-PHA55_RS02715;Dbxref=Genbank:WP_000041970.1;Name=WP_000041970.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313167.2;locus_tag=PHA55_RS02715;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_000041970.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	557336	557881	.	+	.	ID=gene-PHA55_RS02720;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=PHA55_RS02720;old_locus_tag=PHA55_02720
NZ_CP116044.1	Protein Homology	CDS	557336	557881	.	+	0	ID=cds-WP_001295188.1;Parent=gene-PHA55_RS02720;Dbxref=Genbank:WP_001295188.1;Name=WP_001295188.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=PHA55_RS02720;product=oligoribonuclease;protein_id=WP_001295188.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	558092	558167	.	+	.	ID=gene-PHA55_RS02725;Name=PHA55_RS02725;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS02725;old_locus_tag=PHA55_02725
NZ_CP116044.1	tRNAscan-SE	tRNA	558092	558167	.	+	.	ID=rna-PHA55_RS02725;Parent=gene-PHA55_RS02725;anticodon=(pos:558125..558127);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS02725;product=tRNA-Gly
NZ_CP116044.1	tRNAscan-SE	exon	558092	558167	.	+	.	ID=exon-PHA55_RS02725-1;Parent=rna-PHA55_RS02725;anticodon=(pos:558125..558127);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS02725;product=tRNA-Gly
NZ_CP116044.1	RefSeq	gene	558204	558279	.	+	.	ID=gene-PHA55_RS02730;Name=PHA55_RS02730;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS02730;old_locus_tag=PHA55_02730
NZ_CP116044.1	tRNAscan-SE	tRNA	558204	558279	.	+	.	ID=rna-PHA55_RS02730;Parent=gene-PHA55_RS02730;anticodon=(pos:558237..558239);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS02730;product=tRNA-Gly
NZ_CP116044.1	tRNAscan-SE	exon	558204	558279	.	+	.	ID=exon-PHA55_RS02730-1;Parent=rna-PHA55_RS02730;anticodon=(pos:558237..558239);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS02730;product=tRNA-Gly
NZ_CP116044.1	RefSeq	gene	558315	558390	.	+	.	ID=gene-PHA55_RS02735;Name=PHA55_RS02735;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS02735;old_locus_tag=PHA55_02735
NZ_CP116044.1	tRNAscan-SE	tRNA	558315	558390	.	+	.	ID=rna-PHA55_RS02735;Parent=gene-PHA55_RS02735;anticodon=(pos:558348..558350);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS02735;product=tRNA-Gly
NZ_CP116044.1	tRNAscan-SE	exon	558315	558390	.	+	.	ID=exon-PHA55_RS02735-1;Parent=rna-PHA55_RS02735;anticodon=(pos:558348..558350);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS02735;product=tRNA-Gly
NZ_CP116044.1	RefSeq	gene	558624	558677	.	+	.	ID=gene-PHA55_RS02740;Name=PHA55_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02740;old_locus_tag=PHA55_02740
NZ_CP116044.1	Protein Homology	CDS	558624	558677	.	+	0	ID=cds-WP_010723271.1;Parent=gene-PHA55_RS02740;Dbxref=Genbank:WP_010723271.1;Name=WP_010723271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791261.1;locus_tag=PHA55_RS02740;product=hypothetical protein;protein_id=WP_010723271.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	558660	559799	.	-	.	ID=gene-PHA55_RS02745;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=PHA55_RS02745;old_locus_tag=PHA55_02745
NZ_CP116044.1	Protein Homology	CDS	558660	559799	.	-	0	ID=cds-WP_001294219.1;Parent=gene-PHA55_RS02745;Dbxref=Genbank:WP_001294219.1;Name=WP_001294219.1;Ontology_term=GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=PHA55_RS02745;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_001294219.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	559798	561345	.	+	.	ID=gene-PHA55_RS02750;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=protein_coding;locus_tag=PHA55_RS02750;old_locus_tag=PHA55_02750
NZ_CP116044.1	Protein Homology	CDS	559798	561345	.	+	0	ID=cds-WP_001295189.1;Parent=gene-PHA55_RS02750;Dbxref=Genbank:WP_001295189.1;Name=WP_001295189.1;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418588.1;locus_tag=PHA55_RS02750;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_001295189.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	561317	561778	.	+	.	ID=gene-PHA55_RS02755;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=PHA55_RS02755;old_locus_tag=PHA55_02755
NZ_CP116044.1	Protein Homology	CDS	561317	561778	.	+	0	ID=cds-WP_000981977.1;Parent=gene-PHA55_RS02755;Dbxref=Genbank:WP_000981977.1;Name=WP_000981977.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313171.1;locus_tag=PHA55_RS02755;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_000981977.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	561797	563134	.	+	.	ID=gene-PHA55_RS02760;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=PHA55_RS02760;old_locus_tag=PHA55_02760
NZ_CP116044.1	Protein Homology	CDS	561797	563134	.	+	0	ID=cds-WP_000990321.1;Parent=gene-PHA55_RS02760;Dbxref=Genbank:WP_000990321.1;Name=WP_000990321.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418590.1;locus_tag=PHA55_RS02760;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WP_000990321.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	563144	564991	.	+	.	ID=gene-PHA55_RS02765;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=PHA55_RS02765;old_locus_tag=PHA55_02765
NZ_CP116044.1	Protein Homology	CDS	563144	564991	.	+	0	ID=cds-WP_001542593.1;Parent=gene-PHA55_RS02765;Dbxref=Genbank:WP_001542593.1;Name=WP_001542593.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710035.2;locus_tag=PHA55_RS02765;product=DNA mismatch repair endonuclease MutL;protein_id=WP_001542593.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	564984	565934	.	+	.	ID=gene-PHA55_RS02770;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=PHA55_RS02770;old_locus_tag=PHA55_02770
NZ_CP116044.1	Protein Homology	CDS	564984	565934	.	+	0	ID=cds-WP_001280345.1;Parent=gene-PHA55_RS02770;Dbxref=Genbank:WP_001280345.1;Name=WP_001280345.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418592.1;locus_tag=PHA55_RS02770;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_001280345.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	566020	566328	.	+	.	ID=gene-PHA55_RS02775;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=PHA55_RS02775;old_locus_tag=PHA55_02775
NZ_CP116044.1	Protein Homology	CDS	566020	566328	.	+	0	ID=cds-WP_001051883.1;Parent=gene-PHA55_RS02775;Dbxref=Genbank:WP_001051883.1;Name=WP_001051883.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313175.1;locus_tag=PHA55_RS02775;product=RNA chaperone Hfq;protein_id=WP_001051883.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	566404	567684	.	+	.	ID=gene-PHA55_RS02780;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=PHA55_RS02780;old_locus_tag=PHA55_02780
NZ_CP116044.1	Protein Homology	CDS	566404	567684	.	+	0	ID=cds-WP_000460360.1;Parent=gene-PHA55_RS02780;Dbxref=Genbank:WP_000460360.1;Name=WP_000460360.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313176.1;locus_tag=PHA55_RS02780;product=GTPase HflX;protein_id=WP_000460360.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	567770	569029	.	+	.	ID=gene-PHA55_RS02785;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=PHA55_RS02785;old_locus_tag=PHA55_02785
NZ_CP116044.1	Protein Homology	CDS	567770	569029	.	+	0	ID=cds-WP_000312488.1;Parent=gene-PHA55_RS02785;Dbxref=Genbank:WP_000312488.1;Name=WP_000312488.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313177.1;locus_tag=PHA55_RS02785;product=FtsH protease activity modulator HflK;protein_id=WP_000312488.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	569032	570036	.	+	.	ID=gene-PHA55_RS02790;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=PHA55_RS02790;old_locus_tag=PHA55_02790
NZ_CP116044.1	Protein Homology	CDS	569032	570036	.	+	0	ID=cds-WP_001232412.1;Parent=gene-PHA55_RS02790;Dbxref=Genbank:WP_001232412.1;Name=WP_001232412.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313178.1;locus_tag=PHA55_RS02790;product=protease modulator HflC;protein_id=WP_001232412.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	570118	570315	.	+	.	ID=gene-PHA55_RS02795;Name=yjeT;gbkey=Gene;gene=yjeT;gene_biotype=protein_coding;locus_tag=PHA55_RS02795;old_locus_tag=PHA55_02795
NZ_CP116044.1	Protein Homology	CDS	570118	570315	.	+	0	ID=cds-WP_001089295.1;Parent=gene-PHA55_RS02795;Dbxref=Genbank:WP_001089295.1;Name=WP_001089295.1;gbkey=CDS;gene=yjeT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313179.1;locus_tag=PHA55_RS02795;product=DUF2065 domain-containing protein;protein_id=WP_001089295.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	570419	571717	.	+	.	ID=gene-PHA55_RS02800;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=PHA55_RS02800;old_locus_tag=PHA55_02800
NZ_CP116044.1	Protein Homology	CDS	570419	571717	.	+	0	ID=cds-WP_000527955.1;Parent=gene-PHA55_RS02800;Dbxref=Genbank:WP_000527955.1;Name=WP_000527955.1;Ontology_term=GO:0009152,GO:0004019;gbkey=CDS;gene=purA;go_function=adenylosuccinate synthase activity|0004019||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=PHA55_RS02800;product=adenylosuccinate synthase;protein_id=WP_000527955.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	571922	572347	.	+	.	ID=gene-PHA55_RS02805;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=PHA55_RS02805;old_locus_tag=PHA55_02805
NZ_CP116044.1	Protein Homology	CDS	571922	572347	.	+	0	ID=cds-WP_001177644.1;Parent=gene-PHA55_RS02805;Dbxref=Genbank:WP_001177644.1;Name=WP_001177644.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=PHA55_RS02805;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WP_001177644.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	572386	574827	.	+	.	ID=gene-PHA55_RS02810;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=PHA55_RS02810;old_locus_tag=PHA55_02810
NZ_CP116044.1	Protein Homology	CDS	572386	574827	.	+	0	ID=cds-WP_000076316.1;Parent=gene-PHA55_RS02810;Dbxref=Genbank:WP_000076316.1;Name=WP_000076316.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=ribonuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418600.4;locus_tag=PHA55_RS02810;product=ribonuclease R;protein_id=WP_000076316.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	575007	575738	.	+	.	ID=gene-PHA55_RS02815;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=PHA55_RS02815;old_locus_tag=PHA55_02815
NZ_CP116044.1	Protein Homology	CDS	575007	575738	.	+	0	ID=cds-WP_001293282.1;Parent=gene-PHA55_RS02815;Dbxref=Genbank:WP_001293282.1;Name=WP_001293282.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313183.1;locus_tag=PHA55_RS02815;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_001293282.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	575865	576266	.	+	.	ID=gene-PHA55_RS02820;Name=yjfI;gbkey=Gene;gene=yjfI;gene_biotype=protein_coding;locus_tag=PHA55_RS02820;old_locus_tag=PHA55_02820
NZ_CP116044.1	Protein Homology	CDS	575865	576266	.	+	0	ID=cds-WP_000220137.1;Parent=gene-PHA55_RS02820;Dbxref=Genbank:WP_000220137.1;Name=WP_000220137.1;gbkey=CDS;gene=yjfI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313184.1;locus_tag=PHA55_RS02820;product=DUF2170 family protein;protein_id=WP_000220137.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	576285	576983	.	+	.	ID=gene-PHA55_RS02825;Name=yjfJ;gbkey=Gene;gene=yjfJ;gene_biotype=protein_coding;locus_tag=PHA55_RS02825;old_locus_tag=PHA55_02825
NZ_CP116044.1	Protein Homology	CDS	576285	576983	.	+	0	ID=cds-WP_000511955.1;Parent=gene-PHA55_RS02825;Dbxref=Genbank:WP_000511955.1;Name=WP_000511955.1;gbkey=CDS;gene=yjfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418603.1;locus_tag=PHA55_RS02825;product=PspA/IM30 family protein;protein_id=WP_000511955.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	577034	577693	.	+	.	ID=gene-PHA55_RS02830;Name=yjfK;gbkey=Gene;gene=yjfK;gene_biotype=protein_coding;locus_tag=PHA55_RS02830;old_locus_tag=PHA55_02830
NZ_CP116044.1	Protein Homology	CDS	577034	577693	.	+	0	ID=cds-WP_000012553.1;Parent=gene-PHA55_RS02830;Dbxref=Genbank:WP_000012553.1;Name=WP_000012553.1;gbkey=CDS;gene=yjfK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418604.1;locus_tag=PHA55_RS02830;product=YjfK family protein;protein_id=WP_000012553.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	577711	578109	.	+	.	ID=gene-PHA55_RS02835;Name=yjfL;gbkey=Gene;gene=yjfL;gene_biotype=protein_coding;locus_tag=PHA55_RS02835;old_locus_tag=PHA55_02835
NZ_CP116044.1	Protein Homology	CDS	577711	578109	.	+	0	ID=cds-WP_000547760.1;Parent=gene-PHA55_RS02835;Dbxref=Genbank:WP_000547760.1;Name=WP_000547760.1;gbkey=CDS;gene=yjfL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313187.1;locus_tag=PHA55_RS02835;product=DUF350 domain-containing protein;protein_id=WP_000547760.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	578119	578757	.	+	.	ID=gene-PHA55_RS02840;Name=yjfM;gbkey=Gene;gene=yjfM;gene_biotype=protein_coding;locus_tag=PHA55_RS02840;old_locus_tag=PHA55_02840
NZ_CP116044.1	Protein Homology	CDS	578119	578757	.	+	0	ID=cds-WP_000101649.1;Parent=gene-PHA55_RS02840;Dbxref=Genbank:WP_000101649.1;Name=WP_000101649.1;gbkey=CDS;gene=yjfM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313188.1;locus_tag=PHA55_RS02840;product=DUF1190 domain-containing protein;protein_id=WP_000101649.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	578760	579923	.	+	.	ID=gene-PHA55_RS02845;Name=yjfC;gbkey=Gene;gene=yjfC;gene_biotype=protein_coding;locus_tag=PHA55_RS02845;old_locus_tag=PHA55_02845
NZ_CP116044.1	Protein Homology	CDS	578760	579923	.	+	0	ID=cds-WP_000943987.1;Parent=gene-PHA55_RS02845;Dbxref=Genbank:WP_000943987.1;Name=WP_000943987.1;gbkey=CDS;gene=yjfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710049.2;locus_tag=PHA55_RS02845;product=glutathionylspermidine synthase family protein;protein_id=WP_000943987.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	580007	581632	.	+	.	ID=gene-PHA55_RS02850;Name=aidB;gbkey=Gene;gene=aidB;gene_biotype=protein_coding;locus_tag=PHA55_RS02850;old_locus_tag=PHA55_02850
NZ_CP116044.1	Protein Homology	CDS	580007	581632	.	+	0	ID=cds-WP_001339483.1;Parent=gene-PHA55_RS02850;Dbxref=Genbank:WP_001339483.1;Name=WP_001339483.1;Ontology_term=GO:0003995;gbkey=CDS;gene=aidB;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418608.6;locus_tag=PHA55_RS02850;product=isovaleryl-CoA dehydrogenase;protein_id=WP_001339483.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	581749	582024	.	-	.	ID=gene-PHA55_RS02855;Name=yjfN;gbkey=Gene;gene=yjfN;gene_biotype=protein_coding;locus_tag=PHA55_RS02855;old_locus_tag=PHA55_02855
NZ_CP116044.1	Protein Homology	CDS	581749	582024	.	-	0	ID=cds-WP_000811566.1;Parent=gene-PHA55_RS02855;Dbxref=Genbank:WP_000811566.1;Name=WP_000811566.1;gbkey=CDS;gene=yjfN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418609.4;locus_tag=PHA55_RS02855;product=DUF1471 family protease activator YjfN;protein_id=WP_000811566.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	582173	582502	.	-	.	ID=gene-PHA55_RS02860;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=PHA55_RS02860;old_locus_tag=PHA55_02860
NZ_CP116044.1	Protein Homology	CDS	582173	582502	.	-	0	ID=cds-WP_000254636.1;Parent=gene-PHA55_RS02860;Dbxref=Genbank:WP_000254636.1;Name=WP_000254636.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313192.2;locus_tag=PHA55_RS02860;product=biofilm peroxide resistance protein BsmA;protein_id=WP_000254636.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	582684	583433	.	+	.	ID=gene-PHA55_RS02865;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=PHA55_RS02865;old_locus_tag=PHA55_02865
NZ_CP116044.1	Protein Homology	CDS	582684	583433	.	+	0	ID=cds-WP_000569728.1;Parent=gene-PHA55_RS02865;Dbxref=Genbank:WP_000569728.1;Name=WP_000569728.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710055.1;locus_tag=PHA55_RS02865;product=esterase;protein_id=WP_000569728.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	583430	584185	.	-	.	ID=gene-PHA55_RS02870;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=PHA55_RS02870;old_locus_tag=PHA55_02870
NZ_CP116044.1	Protein Homology	CDS	583430	584185	.	-	0	ID=cds-WP_000133631.1;Parent=gene-PHA55_RS02870;Dbxref=Genbank:WP_000133631.1;Name=WP_000133631.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ulaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313194.1;locus_tag=PHA55_RS02870;product=HTH-type transcriptional regulator UlaR;protein_id=WP_000133631.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	584293	585357	.	-	.	ID=gene-PHA55_RS02875;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=PHA55_RS02875;old_locus_tag=PHA55_02875
NZ_CP116044.1	Protein Homology	CDS	584293	585357	.	-	0	ID=cds-WP_001295191.1;Parent=gene-PHA55_RS02875;Dbxref=Genbank:WP_001295191.1;Name=WP_001295191.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=PHA55_RS02875;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_001295191.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	585712	587109	.	+	.	ID=gene-PHA55_RS02880;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;locus_tag=PHA55_RS02880;old_locus_tag=PHA55_02880
NZ_CP116044.1	Protein Homology	CDS	585712	587109	.	+	0	ID=cds-WP_001300695.1;Parent=gene-PHA55_RS02880;Dbxref=Genbank:WP_001300695.1;Name=WP_001300695.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418614.4;locus_tag=PHA55_RS02880;product=PTS ascorbate transporter subunit IIC;protein_id=WP_001300695.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	587125	587430	.	+	.	ID=gene-PHA55_RS02885;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;locus_tag=PHA55_RS02885;old_locus_tag=PHA55_02885
NZ_CP116044.1	Protein Homology	CDS	587125	587430	.	+	0	ID=cds-WP_000218360.1;Parent=gene-PHA55_RS02885;Dbxref=Genbank:WP_000218360.1;Name=WP_000218360.1;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710059.2;locus_tag=PHA55_RS02885;product=PTS ascorbate transporter subunit IIB;protein_id=WP_000218360.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	587440	587904	.	+	.	ID=gene-PHA55_RS02890;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;locus_tag=PHA55_RS02890;old_locus_tag=PHA55_02890
NZ_CP116044.1	Protein Homology	CDS	587440	587904	.	+	0	ID=cds-WP_000776505.1;Parent=gene-PHA55_RS02890;Dbxref=Genbank:WP_000776505.1;Name=WP_000776505.1;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710060.1;locus_tag=PHA55_RS02890;product=PTS ascorbate transporter subunit IIA;protein_id=WP_000776505.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	587918	588568	.	+	.	ID=gene-PHA55_RS02895;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=PHA55_RS02895;old_locus_tag=PHA55_02895
NZ_CP116044.1	Protein Homology	CDS	587918	588568	.	+	0	ID=cds-WP_000056749.1;Parent=gene-PHA55_RS02895;Dbxref=Genbank:WP_000056749.1;Name=WP_000056749.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418617.1;locus_tag=PHA55_RS02895;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000056749.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	588578	589432	.	+	.	ID=gene-PHA55_RS02900;Name=ulaE;gbkey=Gene;gene=ulaE;gene_biotype=protein_coding;locus_tag=PHA55_RS02900;old_locus_tag=PHA55_02900
NZ_CP116044.1	Protein Homology	CDS	588578	589432	.	+	0	ID=cds-WP_000949539.1;Parent=gene-PHA55_RS02900;Dbxref=Genbank:WP_000949539.1;Name=WP_000949539.1;gbkey=CDS;gene=ulaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313200.1;locus_tag=PHA55_RS02900;product=L-ribulose-5-phosphate 3-epimerase UlaE;protein_id=WP_000949539.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	589432	590118	.	+	.	ID=gene-PHA55_RS02905;Name=ulaF;gbkey=Gene;gene=ulaF;gene_biotype=protein_coding;locus_tag=PHA55_RS02905;old_locus_tag=PHA55_02905
NZ_CP116044.1	Protein Homology	CDS	589432	590118	.	+	0	ID=cds-WP_000916039.1;Parent=gene-PHA55_RS02905;Dbxref=Genbank:WP_000916039.1;Name=WP_000916039.1;gbkey=CDS;gene=ulaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313201.1;locus_tag=PHA55_RS02905;product=L-ribulose-5-phosphate 4-epimerase UlaF;protein_id=WP_000916039.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	590213	590764	.	+	.	ID=gene-PHA55_RS02910;Name=PHA55_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02910;old_locus_tag=PHA55_02910
NZ_CP116044.1	Protein Homology	CDS	590213	590764	.	+	0	ID=cds-WP_000985137.1;Parent=gene-PHA55_RS02910;Dbxref=Genbank:WP_000985137.1;Name=WP_000985137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996729.1;locus_tag=PHA55_RS02910;product=DUF1440 domain-containing protein;protein_id=WP_000985137.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	590839	591114	.	-	.	ID=gene-PHA55_RS02915;Name=yjfY;gbkey=Gene;gene=yjfY;gene_biotype=protein_coding;locus_tag=PHA55_RS02915;old_locus_tag=PHA55_02915
NZ_CP116044.1	Protein Homology	CDS	590839	591114	.	-	0	ID=cds-WP_000492914.1;Parent=gene-PHA55_RS02915;Dbxref=Genbank:WP_000492914.1;Name=WP_000492914.1;gbkey=CDS;gene=yjfY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313202.1;locus_tag=PHA55_RS02915;product=DUF1471 family protein YjfY;protein_id=WP_000492914.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	591441	591836	.	+	.	ID=gene-PHA55_RS02920;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=PHA55_RS02920;old_locus_tag=PHA55_02920
NZ_CP116044.1	Protein Homology	CDS	591441	591836	.	+	0	ID=cds-WP_001216676.1;Parent=gene-PHA55_RS02920;Dbxref=Genbank:WP_001216676.1;Name=WP_001216676.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=PHA55_RS02920;product=30S ribosomal protein S6;protein_id=WP_001216676.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	591843	592157	.	+	.	ID=gene-PHA55_RS02925;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=PHA55_RS02925;old_locus_tag=PHA55_02925
NZ_CP116044.1	Protein Homology	CDS	591843	592157	.	+	0	ID=cds-WP_001296681.1;Parent=gene-PHA55_RS02925;Dbxref=Genbank:WP_001296681.1;Name=WP_001296681.1;Ontology_term=GO:0006269,GO:0003697;gbkey=CDS;gene=priB;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313204.1;locus_tag=PHA55_RS02925;product=primosomal replication protein N;protein_id=WP_001296681.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	592162	592389	.	+	.	ID=gene-PHA55_RS02930;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=PHA55_RS02930;old_locus_tag=PHA55_02930
NZ_CP116044.1	Protein Homology	CDS	592162	592389	.	+	0	ID=cds-WP_000135199.1;Parent=gene-PHA55_RS02930;Dbxref=Genbank:WP_000135199.1;Name=WP_000135199.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=PHA55_RS02930;product=30S ribosomal protein S18;protein_id=WP_000135199.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	592431	592880	.	+	.	ID=gene-PHA55_RS02935;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=PHA55_RS02935;old_locus_tag=PHA55_02935
NZ_CP116044.1	Protein Homology	CDS	592431	592880	.	+	0	ID=cds-WP_001196062.1;Parent=gene-PHA55_RS02935;Dbxref=Genbank:WP_001196062.1;Name=WP_001196062.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplI;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=PHA55_RS02935;product=50S ribosomal protein L9;protein_id=WP_001196062.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	592992	593963	.	-	.	ID=gene-PHA55_RS02940;Name=PHA55_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02940;old_locus_tag=PHA55_02940
NZ_CP116044.1	Protein Homology	CDS	592992	593963	.	-	0	ID=cds-WP_000695886.1;Parent=gene-PHA55_RS02940;Dbxref=Genbank:WP_000695886.1;Name=WP_000695886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001422748.1;locus_tag=PHA55_RS02940;product=TRAP transporter substrate-binding protein;protein_id=WP_000695886.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	594016	595317	.	-	.	ID=gene-PHA55_RS02945;Name=PHA55_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02945;old_locus_tag=PHA55_02945
NZ_CP116044.1	Protein Homology	CDS	594016	595317	.	-	0	ID=cds-WP_000386849.1;Parent=gene-PHA55_RS02945;Dbxref=Genbank:WP_000386849.1;Name=WP_000386849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000386845.1;locus_tag=PHA55_RS02945;product=TRAP transporter large permease;protein_id=WP_000386849.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	595360	595836	.	-	.	ID=gene-PHA55_RS02950;Name=PHA55_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02950;old_locus_tag=PHA55_02950
NZ_CP116044.1	Protein Homology	CDS	595360	595836	.	-	0	ID=cds-WP_001244358.1;Parent=gene-PHA55_RS02950;Dbxref=Genbank:WP_001244358.1;Name=WP_001244358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012311688.1;locus_tag=PHA55_RS02950;product=TRAP transporter small permease;protein_id=WP_001244358.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	595857	597938	.	-	.	ID=gene-PHA55_RS02955;Name=PHA55_RS02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02955;old_locus_tag=PHA55_02955
NZ_CP116044.1	Protein Homology	CDS	595857	597938	.	-	0	ID=cds-WP_023568933.1;Parent=gene-PHA55_RS02955;Dbxref=Genbank:WP_023568933.1;Name=WP_023568933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005766390.1;locus_tag=PHA55_RS02955;product=FAD-binding protein;protein_id=WP_023568933.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	597935	599476	.	-	.	ID=gene-PHA55_RS02960;Name=PHA55_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02960;old_locus_tag=PHA55_02960
NZ_CP116044.1	Protein Homology	CDS	597935	599476	.	-	0	ID=cds-WP_001226974.1;Parent=gene-PHA55_RS02960;Dbxref=Genbank:WP_001226974.1;Name=WP_001226974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001226973.1;locus_tag=PHA55_RS02960;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=WP_001226974.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	599486	600262	.	-	.	ID=gene-PHA55_RS02965;Name=PHA55_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02965;old_locus_tag=PHA55_02965
NZ_CP116044.1	Protein Homology	CDS	599486	600262	.	-	0	ID=cds-WP_001283564.1;Parent=gene-PHA55_RS02965;Dbxref=Genbank:WP_001283564.1;Name=WP_001283564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001283531.1;locus_tag=PHA55_RS02965;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_001283564.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	600272	601114	.	-	.	ID=gene-PHA55_RS02970;Name=PHA55_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02970;old_locus_tag=PHA55_02970
NZ_CP116044.1	Protein Homology	CDS	600272	601114	.	-	0	ID=cds-WP_001205226.1;Parent=gene-PHA55_RS02970;Dbxref=Genbank:WP_001205226.1;Name=WP_001205226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001205218.1;locus_tag=PHA55_RS02970;product=sugar phosphate isomerase/epimerase;protein_id=WP_001205226.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	601124	601915	.	-	.	ID=gene-PHA55_RS02975;Name=PHA55_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02975;old_locus_tag=PHA55_02975
NZ_CP116044.1	Protein Homology	CDS	601124	601915	.	-	0	ID=cds-WP_000843401.1;Parent=gene-PHA55_RS02975;Dbxref=Genbank:WP_000843401.1;Name=WP_000843401.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709993.2;locus_tag=PHA55_RS02975;product=3-ketoacyl-ACP reductase;protein_id=WP_000843401.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	602125	602763	.	+	.	ID=gene-PHA55_RS02980;Name=PHA55_RS02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02980;old_locus_tag=PHA55_02980
NZ_CP116044.1	Protein Homology	CDS	602125	602763	.	+	0	ID=cds-WP_001356012.1;Parent=gene-PHA55_RS02980;Dbxref=Genbank:WP_001356012.1;Name=WP_001356012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002431731.1;locus_tag=PHA55_RS02980;product=TetR/AcrR family transcriptional regulator;protein_id=WP_001356012.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	602764	603393	.	-	.	ID=gene-PHA55_RS02985;Name=PHA55_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS02985;old_locus_tag=PHA55_02985
NZ_CP116044.1	Protein Homology	CDS	602764	603393	.	-	0	ID=cds-WP_001119492.1;Parent=gene-PHA55_RS02985;Dbxref=Genbank:WP_001119492.1;Name=WP_001119492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418627.4;locus_tag=PHA55_RS02985;product=OapA family protein;protein_id=WP_001119492.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	603612	604232	.	+	.	ID=gene-PHA55_RS02990;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=PHA55_RS02990;old_locus_tag=PHA55_02990
NZ_CP116044.1	Protein Homology	CDS	603612	604232	.	+	0	ID=cds-WP_000211225.1;Parent=gene-PHA55_RS02990;Dbxref=Genbank:WP_000211225.1;Name=WP_000211225.1;gbkey=CDS;gene=fklB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=PHA55_RS02990;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000211225.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	604541	605953	.	+	.	ID=gene-PHA55_RS02995;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=PHA55_RS02995;old_locus_tag=PHA55_02995
NZ_CP116044.1	Protein Homology	CDS	604541	605953	.	+	0	ID=cds-WP_000228343.1;Parent=gene-PHA55_RS02995;Dbxref=Genbank:WP_000228343.1;Name=WP_000228343.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313213.1;locus_tag=PHA55_RS02995;product=D-serine/D-alanine/glycine transporter;protein_id=WP_000228343.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	605998	606660	.	-	.	ID=gene-PHA55_RS03000;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=PHA55_RS03000;old_locus_tag=PHA55_03000
NZ_CP116044.1	Protein Homology	CDS	605998	606660	.	-	0	ID=cds-WP_000331456.1;Parent=gene-PHA55_RS03000;Dbxref=Genbank:WP_000331456.1;Name=WP_000331456.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418630.1;locus_tag=PHA55_RS03000;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_000331456.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	606768	607733	.	-	.	ID=gene-PHA55_RS03005;Name=ytfF;gbkey=Gene;gene=ytfF;gene_biotype=protein_coding;locus_tag=PHA55_RS03005;old_locus_tag=PHA55_03005
NZ_CP116044.1	Protein Homology	CDS	606768	607733	.	-	0	ID=cds-WP_001296686.1;Parent=gene-PHA55_RS03005;Dbxref=Genbank:WP_001296686.1;Name=WP_001296686.1;gbkey=CDS;gene=ytfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709987.2;locus_tag=PHA55_RS03005;product=DMT family transporter;protein_id=WP_001296686.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	607841	608701	.	-	.	ID=gene-PHA55_RS03010;Name=qorB;gbkey=Gene;gene=qorB;gene_biotype=protein_coding;locus_tag=PHA55_RS03010;old_locus_tag=PHA55_03010
NZ_CP116044.1	Protein Homology	CDS	607841	608701	.	-	0	ID=cds-WP_042099428.1;Parent=gene-PHA55_RS03010;Dbxref=Genbank:WP_042099428.1;Name=WP_042099428.1;gbkey=CDS;gene=qorB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418632.1;locus_tag=PHA55_RS03010;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_042099428.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	608790	609170	.	+	.	ID=gene-PHA55_RS03015;Name=ytfH;gbkey=Gene;gene=ytfH;gene_biotype=protein_coding;locus_tag=PHA55_RS03015;old_locus_tag=PHA55_03015
NZ_CP116044.1	Protein Homology	CDS	608790	609170	.	+	0	ID=cds-WP_000084622.1;Parent=gene-PHA55_RS03015;Dbxref=Genbank:WP_000084622.1;Name=WP_000084622.1;gbkey=CDS;gene=ytfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418633.4;locus_tag=PHA55_RS03015;product=helix-turn-helix domain-containing protein;protein_id=WP_000084622.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	609299	611242	.	-	.	ID=gene-PHA55_RS03020;Name=cpdB;gbkey=Gene;gene=cpdB;gene_biotype=protein_coding;locus_tag=PHA55_RS03020;old_locus_tag=PHA55_03020
NZ_CP116044.1	Protein Homology	CDS	609299	611242	.	-	0	ID=cds-WP_000589423.1;Parent=gene-PHA55_RS03020;Dbxref=Genbank:WP_000589423.1;Name=WP_000589423.1;Ontology_term=GO:0006139,GO:0008663,GO:0009897,GO:0030288;gbkey=CDS;gene=cpdB;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418634.1;locus_tag=PHA55_RS03020;product=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase;protein_id=WP_000589423.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	611432	612172	.	+	.	ID=gene-PHA55_RS03025;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=PHA55_RS03025;old_locus_tag=PHA55_03025
NZ_CP116044.1	Protein Homology	CDS	611432	612172	.	+	0	ID=cds-WP_000886909.1;Parent=gene-PHA55_RS03025;Dbxref=Genbank:WP_000886909.1;Name=WP_000886909.1;Ontology_term=GO:0046855,GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;go_process=inositol phosphate dephosphorylation|0046855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313219.1;locus_tag=PHA55_RS03025;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_000886909.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	612162	612719	.	-	.	ID=gene-PHA55_RS03030;Name=ytfJ;gbkey=Gene;gene=ytfJ;gene_biotype=protein_coding;locus_tag=PHA55_RS03030;old_locus_tag=PHA55_03030
NZ_CP116044.1	Protein Homology	CDS	612162	612719	.	-	0	ID=cds-WP_000175289.1;Parent=gene-PHA55_RS03030;Dbxref=Genbank:WP_000175289.1;Name=WP_000175289.1;gbkey=CDS;gene=ytfJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001498728.1;locus_tag=PHA55_RS03030;product=YtfJ family protein;protein_id=WP_000175289.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	613044	613250	.	+	.	ID=gene-PHA55_RS03035;Name=ytfK;gbkey=Gene;gene=ytfK;gene_biotype=protein_coding;locus_tag=PHA55_RS03035;old_locus_tag=PHA55_03035
NZ_CP116044.1	Protein Homology	CDS	613044	613250	.	+	0	ID=cds-WP_000689228.1;Parent=gene-PHA55_RS03035;Dbxref=Genbank:WP_000689228.1;Name=WP_000689228.1;gbkey=CDS;gene=ytfK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966176.1;locus_tag=PHA55_RS03035;product=DUF1107 domain-containing protein;protein_id=WP_000689228.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	613329	614672	.	-	.	ID=gene-PHA55_RS03040;Name=paeA;gbkey=Gene;gene=paeA;gene_biotype=protein_coding;locus_tag=PHA55_RS03040;old_locus_tag=PHA55_03040
NZ_CP116044.1	Protein Homology	CDS	613329	614672	.	-	0	ID=cds-WP_000935042.1;Parent=gene-PHA55_RS03040;Dbxref=Genbank:WP_000935042.1;Name=WP_000935042.1;gbkey=CDS;gene=paeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709980.1;locus_tag=PHA55_RS03040;product=hemolysin family protein;protein_id=WP_000935042.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	614995	615633	.	-	.	ID=gene-PHA55_RS03045;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=PHA55_RS03045;old_locus_tag=PHA55_03045
NZ_CP116044.1	Protein Homology	CDS	614995	615633	.	-	0	ID=cds-WP_001295196.1;Parent=gene-PHA55_RS03045;Dbxref=Genbank:WP_001295196.1;Name=WP_001295196.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418640.1;locus_tag=PHA55_RS03045;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_001295196.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	615839	617572	.	+	.	ID=gene-PHA55_RS03050;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=PHA55_RS03050;old_locus_tag=PHA55_03050
NZ_CP116044.1	Protein Homology	CDS	615839	617572	.	+	0	ID=cds-WP_001269327.1;Parent=gene-PHA55_RS03050;Dbxref=Genbank:WP_001269327.1;Name=WP_001269327.1;gbkey=CDS;gene=tamA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313225.1;locus_tag=PHA55_RS03050;product=autotransporter assembly complex protein TamA;protein_id=WP_001269327.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	617569	621348	.	+	.	ID=gene-PHA55_RS03055;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=PHA55_RS03055;old_locus_tag=PHA55_03055
NZ_CP116044.1	Protein Homology	CDS	617569	621348	.	+	0	ID=cds-WP_000060936.1;Parent=gene-PHA55_RS03055;Dbxref=Genbank:WP_000060936.1;Name=WP_000060936.1;gbkey=CDS;gene=tamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709977.1;locus_tag=PHA55_RS03055;product=autotransporter assembly complex protein TamB;protein_id=WP_000060936.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	621351	621692	.	+	.	ID=gene-PHA55_RS03060;Name=ytfP;gbkey=Gene;gene=ytfP;gene_biotype=protein_coding;locus_tag=PHA55_RS03060;old_locus_tag=PHA55_03060
NZ_CP116044.1	Protein Homology	CDS	621351	621692	.	+	0	ID=cds-WP_001219160.1;Parent=gene-PHA55_RS03060;Dbxref=Genbank:WP_001219160.1;Name=WP_001219160.1;gbkey=CDS;gene=ytfP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313227.1;locus_tag=PHA55_RS03060;product=gamma-glutamylcyclotransferase;protein_id=WP_001219160.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	622072	622602	.	-	.	ID=gene-PHA55_RS03065;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=PHA55_RS03065;old_locus_tag=PHA55_03065
NZ_CP116044.1	Protein Homology	CDS	622072	622602	.	-	0	ID=cds-WP_000055072.1;Parent=gene-PHA55_RS03065;Dbxref=Genbank:WP_000055072.1;Name=WP_000055072.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1;locus_tag=PHA55_RS03065;product=inorganic diphosphatase;protein_id=WP_000055072.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	622912	623868	.	+	.	ID=gene-PHA55_RS03070;Name=ytfQ;gbkey=Gene;gene=ytfQ;gene_biotype=protein_coding;locus_tag=PHA55_RS03070;old_locus_tag=PHA55_03070
NZ_CP116044.1	Protein Homology	CDS	622912	623868	.	+	0	ID=cds-WP_000265933.1;Parent=gene-PHA55_RS03070;Dbxref=Genbank:WP_000265933.1;Name=WP_000265933.1;gbkey=CDS;gene=ytfQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313232.1;locus_tag=PHA55_RS03070;product=galactofuranose ABC transporter substrate-binding protein YtfQ;protein_id=WP_000265933.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	624008	625510	.	+	.	ID=gene-PHA55_RS03075;Name=ytfR;gbkey=Gene;gene=ytfR;gene_biotype=protein_coding;locus_tag=PHA55_RS03075;old_locus_tag=PHA55_03075
NZ_CP116044.1	Protein Homology	CDS	624008	625510	.	+	0	ID=cds-WP_033557615.1;Parent=gene-PHA55_RS03075;Dbxref=Genbank:WP_033557615.1;Name=WP_033557615.1;gbkey=CDS;gene=ytfR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026286.1;locus_tag=PHA55_RS03075;product=sugar ABC transporter ATP-binding protein;protein_id=WP_033557615.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	625524	626546	.	+	.	ID=gene-PHA55_RS03080;Name=ytfT;gbkey=Gene;gene=ytfT;gene_biotype=protein_coding;locus_tag=PHA55_RS03080;old_locus_tag=PHA55_03080
NZ_CP116044.1	Protein Homology	CDS	625524	626546	.	+	0	ID=cds-WP_001296689.1;Parent=gene-PHA55_RS03080;Dbxref=Genbank:WP_001296689.1;Name=WP_001296689.1;gbkey=CDS;gene=ytfT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313234.2;locus_tag=PHA55_RS03080;product=ABC transporter permease;protein_id=WP_001296689.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	626533	627528	.	+	.	ID=gene-PHA55_RS03085;Name=yjfF;gbkey=Gene;gene=yjfF;gene_biotype=protein_coding;locus_tag=PHA55_RS03085;old_locus_tag=PHA55_03085
NZ_CP116044.1	Protein Homology	CDS	626533	627528	.	+	0	ID=cds-WP_000596015.1;Parent=gene-PHA55_RS03085;Dbxref=Genbank:WP_000596015.1;Name=WP_000596015.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjfF;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418652.2;locus_tag=PHA55_RS03085;product=sugar ABC transporter permease YjfF;protein_id=WP_000596015.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	627561	628559	.	-	.	ID=gene-PHA55_RS03090;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=PHA55_RS03090;old_locus_tag=PHA55_03090
NZ_CP116044.1	Protein Homology	CDS	627561	628559	.	-	0	ID=cds-WP_000853753.1;Parent=gene-PHA55_RS03090;Dbxref=Genbank:WP_000853753.1;Name=WP_000853753.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=PHA55_RS03090;product=class 1 fructose-bisphosphatase;protein_id=WP_000853753.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	628735	630108	.	+	.	ID=gene-PHA55_RS03095;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=PHA55_RS03095;old_locus_tag=PHA55_03095
NZ_CP116044.1	Protein Homology	CDS	628735	630108	.	+	0	ID=cds-WP_001219792.1;Parent=gene-PHA55_RS03095;Dbxref=Genbank:WP_001219792.1;Name=WP_001219792.1;Ontology_term=GO:0009252,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313237.1;locus_tag=PHA55_RS03095;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_001219792.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	630259	630810	.	-	.	ID=gene-PHA55_RS03100;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=PHA55_RS03100;old_locus_tag=PHA55_03100
NZ_CP116044.1	Protein Homology	CDS	630259	630810	.	-	0	ID=cds-WP_000166270.1;Parent=gene-PHA55_RS03100;Dbxref=Genbank:WP_000166270.1;Name=WP_000166270.1;gbkey=CDS;gene=yjgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313238.1;locus_tag=PHA55_RS03100;product=ribosome biogenesis factor YjgA;protein_id=WP_000166270.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	630904	632256	.	+	.	ID=gene-PHA55_RS03105;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=PHA55_RS03105;old_locus_tag=PHA55_03105
NZ_CP116044.1	Protein Homology	CDS	630904	632256	.	+	0	ID=cds-WP_001162171.1;Parent=gene-PHA55_RS03105;Dbxref=Genbank:WP_001162171.1;Name=WP_001162171.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313239.1;locus_tag=PHA55_RS03105;product=metalloprotease PmbA;protein_id=WP_001162171.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	632439	632825	.	+	.	ID=gene-PHA55_RS03110;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=PHA55_RS03110;old_locus_tag=PHA55_03110
NZ_CP116044.1	Protein Homology	CDS	632439	632825	.	+	0	ID=cds-WP_001232242.1;Parent=gene-PHA55_RS03110;Dbxref=Genbank:WP_001232242.1;Name=WP_001232242.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313240.2;locus_tag=PHA55_RS03110;product=cytochrome b562;protein_id=WP_001232242.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	632870	633334	.	-	.	ID=gene-PHA55_RS03115;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=PHA55_RS03115;old_locus_tag=PHA55_03115
NZ_CP116044.1	Protein Homology	CDS	632870	633334	.	-	0	ID=cds-WP_001106233.1;Parent=gene-PHA55_RS03115;Dbxref=Genbank:WP_001106233.1;Name=WP_001106233.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313241.1;locus_tag=PHA55_RS03115;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WP_001106233.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	633492	635630	.	-	.	ID=gene-PHA55_RS03120;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=PHA55_RS03120;old_locus_tag=PHA55_03120
NZ_CP116044.1	Protein Homology	CDS	633492	635630	.	-	0	ID=cds-WP_000187778.1;Parent=gene-PHA55_RS03120;Dbxref=Genbank:WP_000187778.1;Name=WP_000187778.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418659.1;locus_tag=PHA55_RS03120;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_000187778.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	636024	637679	.	-	.	ID=gene-PHA55_RS03125;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=PHA55_RS03125;old_locus_tag=PHA55_03125
NZ_CP116044.1	Protein Homology	CDS	636024	637679	.	-	0	ID=cds-WP_001351398.1;Parent=gene-PHA55_RS03125;Dbxref=Genbank:WP_001351398.1;Name=WP_001351398.1;Ontology_term=GO:0005991,GO:0008788;gbkey=CDS;gene=treC;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709962.2;locus_tag=PHA55_RS03125;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_001351398.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	637729	639150	.	-	.	ID=gene-PHA55_RS03130;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=PHA55_RS03130;old_locus_tag=PHA55_03130
NZ_CP116044.1	Protein Homology	CDS	637729	639150	.	-	0	ID=cds-WP_001297258.1;Parent=gene-PHA55_RS03130;Dbxref=Genbank:WP_001297258.1;Name=WP_001297258.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treB;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313244.1;locus_tag=PHA55_RS03130;product=PTS trehalose transporter subunit IIBC;protein_id=WP_001297258.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	639269	640216	.	-	.	ID=gene-PHA55_RS03135;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=PHA55_RS03135;old_locus_tag=PHA55_03135
NZ_CP116044.1	Protein Homology	CDS	639269	640216	.	-	0	ID=cds-WP_001181332.1;Parent=gene-PHA55_RS03135;Dbxref=Genbank:WP_001181332.1;Name=WP_001181332.1;Ontology_term=GO:0005975,GO:0006355,GO:0003700;gbkey=CDS;gene=treR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=carbohydrate metabolic process|0005975||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418662.1;locus_tag=PHA55_RS03135;product=trehalose operon repressor TreR;protein_id=WP_001181332.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	640401	640454	.	+	.	ID=gene-PHA55_RS03140;Name=mgtL;gbkey=Gene;gene=mgtL;gene_biotype=protein_coding;locus_tag=PHA55_RS03140;old_locus_tag=PHA55_03140
NZ_CP116044.1	Protein Homology	CDS	640401	640454	.	+	0	ID=cds-WP_001387276.1;Parent=gene-PHA55_RS03140;Dbxref=Genbank:WP_001387276.1;Name=WP_001387276.1;gbkey=CDS;gene=mgtL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003933616.1;locus_tag=PHA55_RS03140;product=mgtA regulatory leader peptide MgtL;protein_id=WP_001387276.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	640595	643291	.	+	.	ID=gene-PHA55_RS03145;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=PHA55_RS03145;old_locus_tag=PHA55_03145
NZ_CP116044.1	Protein Homology	CDS	640595	643291	.	+	0	ID=cds-WP_000471866.1;Parent=gene-PHA55_RS03145;Dbxref=Genbank:WP_000471866.1;Name=WP_000471866.1;Ontology_term=GO:0015693,GO:0015444;gbkey=CDS;gene=mgtA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313246.1;locus_tag=PHA55_RS03145;product=magnesium-translocating P-type ATPase;protein_id=WP_000471866.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	643497	643883	.	-	.	ID=gene-PHA55_RS03150;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=PHA55_RS03150;old_locus_tag=PHA55_03150
NZ_CP116044.1	Protein Homology	CDS	643497	643883	.	-	0	ID=cds-WP_000047539.1;Parent=gene-PHA55_RS03150;Dbxref=Genbank:WP_000047539.1;Name=WP_000047539.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418664.2;locus_tag=PHA55_RS03150;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WP_000047539.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	643956	644417	.	-	.	ID=gene-PHA55_RS03155;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=PHA55_RS03155;old_locus_tag=PHA55_03155
NZ_CP116044.1	Protein Homology	CDS	643956	644417	.	-	0	ID=cds-WP_000148581.1;Parent=gene-PHA55_RS03155;Dbxref=Genbank:WP_000148581.1;Name=WP_000148581.1;Ontology_term=GO:0009220,GO:0004070;gbkey=CDS;gene=pyrI;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=PHA55_RS03155;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_000148581.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	644430	645365	.	-	.	ID=gene-PHA55_RS03160;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=PHA55_RS03160;old_locus_tag=PHA55_03160
NZ_CP116044.1	Protein Homology	CDS	644430	645365	.	-	0	ID=cds-WP_000013046.1;Parent=gene-PHA55_RS03160;Dbxref=Genbank:WP_000013046.1;Name=WP_000013046.1;Ontology_term=GO:0009220,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313249.1;locus_tag=PHA55_RS03160;product=aspartate carbamoyltransferase;protein_id=WP_000013046.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	645369	645503	.	-	.	ID=gene-PHA55_RS03165;Name=pyrL;gbkey=Gene;gene=pyrL;gene_biotype=protein_coding;locus_tag=PHA55_RS03165;old_locus_tag=PHA55_03165
NZ_CP116044.1	Protein Homology	CDS	645369	645503	.	-	0	ID=cds-WP_001296693.1;Parent=gene-PHA55_RS03165;Dbxref=Genbank:WP_001296693.1;Name=WP_001296693.1;gbkey=CDS;gene=pyrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313250.1;locus_tag=PHA55_RS03165;product=pyr operon leader peptide;protein_id=WP_001296693.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	645784	646179	.	-	.	ID=gene-PHA55_RS03170;Name=yjgH;gbkey=Gene;gene=yjgH;gene_biotype=protein_coding;locus_tag=PHA55_RS03170;old_locus_tag=PHA55_03170
NZ_CP116044.1	Protein Homology	CDS	645784	646179	.	-	0	ID=cds-WP_000230281.1;Parent=gene-PHA55_RS03170;Dbxref=Genbank:WP_000230281.1;Name=WP_000230281.1;gbkey=CDS;gene=yjgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418669.1;locus_tag=PHA55_RS03170;product=RidA family protein;protein_id=WP_000230281.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	646310	647023	.	-	.	ID=gene-PHA55_RS03175;Name=bdcA;gbkey=Gene;gene=bdcA;gene_biotype=protein_coding;locus_tag=PHA55_RS03175;old_locus_tag=PHA55_03175
NZ_CP116044.1	Protein Homology	CDS	646310	647023	.	-	0	ID=cds-WP_000500727.1;Parent=gene-PHA55_RS03175;Dbxref=Genbank:WP_000500727.1;Name=WP_000500727.1;Ontology_term=GO:0016491;gbkey=CDS;gene=bdcA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418670.1;locus_tag=PHA55_RS03175;product=SDR family oxidoreductase;protein_id=WP_000500727.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	647094	647687	.	+	.	ID=gene-PHA55_RS03180;Name=bdcR;gbkey=Gene;gene=bdcR;gene_biotype=protein_coding;locus_tag=PHA55_RS03180;old_locus_tag=PHA55_03180
NZ_CP116044.1	Protein Homology	CDS	647094	647687	.	+	0	ID=cds-WP_000256656.1;Parent=gene-PHA55_RS03180;Dbxref=Genbank:WP_000256656.1;Name=WP_000256656.1;gbkey=CDS;gene=bdcR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709951.3;locus_tag=PHA55_RS03180;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000256656.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	647832	648284	.	+	.	ID=gene-PHA55_RS03185;Name=tabA;gbkey=Gene;gene=tabA;gene_biotype=protein_coding;locus_tag=PHA55_RS03185;old_locus_tag=PHA55_03185
NZ_CP116044.1	Protein Homology	CDS	647832	648284	.	+	0	ID=cds-WP_000583470.1;Parent=gene-PHA55_RS03185;Dbxref=Genbank:WP_000583470.1;Name=WP_000583470.1;gbkey=CDS;gene=tabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313256.2;locus_tag=PHA55_RS03185;product=toxin-antitoxin biofilm protein TabA;protein_id=WP_000583470.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	648407	649111	.	+	.	ID=gene-PHA55_RS03190;Name=PHA55_RS03190;end_range=649111,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS03190;old_locus_tag=PHA55_03190;partial=true;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	648407	649111	.	+	0	ID=cds-PHA55_RS03190;Parent=gene-PHA55_RS03190;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=649111,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001705631.1;locus_tag=PHA55_RS03190;partial=true;product=DNA-binding protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	649737	649967	.	+	.	ID=gene-PHA55_RS03195;Name=PHA55_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS03195;old_locus_tag=PHA55_03195
NZ_CP116044.1	GeneMarkS-2+	CDS	649737	649967	.	+	0	ID=cds-WP_001309158.1;Parent=gene-PHA55_RS03195;Dbxref=Genbank:WP_001309158.1;Name=WP_001309158.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA55_RS03195;product=hypothetical protein;protein_id=WP_001309158.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	650068	651072	.	-	.	ID=gene-PHA55_RS03200;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=PHA55_RS03200;old_locus_tag=PHA55_03200
NZ_CP116044.1	Protein Homology	CDS	650068	651072	.	-	0	ID=cds-WP_000012907.1;Parent=gene-PHA55_RS03200;Dbxref=Genbank:WP_000012907.1;Name=WP_000012907.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313258.1;locus_tag=PHA55_RS03200;product=ornithine carbamoyltransferase;protein_id=WP_000012907.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	651234	651650	.	+	.	ID=gene-PHA55_RS03205;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=PHA55_RS03205;old_locus_tag=PHA55_03205
NZ_CP116044.1	Protein Homology	CDS	651234	651650	.	+	0	ID=cds-WP_000002953.1;Parent=gene-PHA55_RS03205;Dbxref=Genbank:WP_000002953.1;Name=WP_000002953.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313259.1;locus_tag=PHA55_RS03205;product=ribonuclease E inhibitor RraB;protein_id=WP_000002953.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	651696	652199	.	-	.	ID=gene-PHA55_RS03210;Name=yjgM;gbkey=Gene;gene=yjgM;gene_biotype=protein_coding;locus_tag=PHA55_RS03210;old_locus_tag=PHA55_03210
NZ_CP116044.1	Protein Homology	CDS	651696	652199	.	-	0	ID=cds-WP_001059422.1;Parent=gene-PHA55_RS03210;Dbxref=Genbank:WP_001059422.1;Name=WP_001059422.1;gbkey=CDS;gene=yjgM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026287.1;locus_tag=PHA55_RS03210;product=GNAT family N-acetyltransferase;protein_id=WP_001059422.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	652392	653588	.	+	.	ID=gene-PHA55_RS03215;Name=yjgN;gbkey=Gene;gene=yjgN;gene_biotype=protein_coding;locus_tag=PHA55_RS03215;old_locus_tag=PHA55_03215
NZ_CP116044.1	Protein Homology	CDS	652392	653588	.	+	0	ID=cds-WP_000079644.1;Parent=gene-PHA55_RS03215;Dbxref=Genbank:WP_000079644.1;Name=WP_000079644.1;gbkey=CDS;gene=yjgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709944.2;locus_tag=PHA55_RS03215;product=YjgN family protein;protein_id=WP_000079644.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	653644	656499	.	-	.	ID=gene-PHA55_RS03220;Name=valS;gbkey=Gene;gene=valS;gene_biotype=protein_coding;locus_tag=PHA55_RS03220;old_locus_tag=PHA55_03220
NZ_CP116044.1	Protein Homology	CDS	653644	656499	.	-	0	ID=cds-WP_001701841.1;Parent=gene-PHA55_RS03220;Dbxref=Genbank:WP_001701841.1;Name=WP_001701841.1;Ontology_term=GO:0006438,GO:0004832,GO:0005737;gbkey=CDS;gene=valS;go_component=cytoplasm|0005737||IEA;go_function=valine-tRNA ligase activity|0004832||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=PHA55_RS03220;product=valine--tRNA ligase;protein_id=WP_001701841.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	656499	656942	.	-	.	ID=gene-PHA55_RS03225;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=PHA55_RS03225;old_locus_tag=PHA55_03225
NZ_CP116044.1	Protein Homology	CDS	656499	656942	.	-	0	ID=cds-WP_000786399.1;Parent=gene-PHA55_RS03225;Dbxref=Genbank:WP_000786399.1;Name=WP_000786399.1;gbkey=CDS;gene=holC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098129.1;locus_tag=PHA55_RS03225;product=DNA polymerase III subunit chi;protein_id=WP_000786399.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	657076	658587	.	-	.	ID=gene-PHA55_RS03230;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=PHA55_RS03230;old_locus_tag=PHA55_03230
NZ_CP116044.1	Protein Homology	CDS	657076	658587	.	-	0	ID=cds-WP_000397144.1;Parent=gene-PHA55_RS03230;Dbxref=Genbank:WP_000397144.1;Name=WP_000397144.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313264.1;locus_tag=PHA55_RS03230;product=leucyl aminopeptidase;protein_id=WP_000397144.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	658741	658791	.	+	.	ID=gene-PHA55_RS03235;Name=ytgA;gbkey=Gene;gene=ytgA;gene_biotype=protein_coding;locus_tag=PHA55_RS03235;old_locus_tag=PHA55_03235
NZ_CP116044.1	Protein Homology	CDS	658741	658791	.	+	0	ID=cds-WP_211180521.1;Parent=gene-PHA55_RS03235;Dbxref=Genbank:WP_211180521.1;Name=WP_211180521.1;gbkey=CDS;gene=ytgA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051214.1;locus_tag=PHA55_RS03235;product=protein YtgA;protein_id=WP_211180521.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	658854	659954	.	+	.	ID=gene-PHA55_RS03240;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=PHA55_RS03240;old_locus_tag=PHA55_03240
NZ_CP116044.1	Protein Homology	CDS	658854	659954	.	+	0	ID=cds-WP_000584114.1;Parent=gene-PHA55_RS03240;Dbxref=Genbank:WP_000584114.1;Name=WP_000584114.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptF;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313265.1;locus_tag=PHA55_RS03240;product=LPS export ABC transporter permease LptF;protein_id=WP_000584114.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	659954	661036	.	+	.	ID=gene-PHA55_RS03245;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=PHA55_RS03245;old_locus_tag=PHA55_03245
NZ_CP116044.1	Protein Homology	CDS	659954	661036	.	+	0	ID=cds-WP_001295681.1;Parent=gene-PHA55_RS03245;Dbxref=Genbank:WP_001295681.1;Name=WP_001295681.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptG;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313266.2;locus_tag=PHA55_RS03245;product=LPS export ABC transporter permease LptG;protein_id=WP_001295681.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	661155	662657	.	-	.	ID=gene-PHA55_RS03250;Name=yjgR;gbkey=Gene;gene=yjgR;gene_biotype=protein_coding;locus_tag=PHA55_RS03250;old_locus_tag=PHA55_03250
NZ_CP116044.1	Protein Homology	CDS	661155	662657	.	-	0	ID=cds-WP_001294544.1;Parent=gene-PHA55_RS03250;Dbxref=Genbank:WP_001294544.1;Name=WP_001294544.1;gbkey=CDS;gene=yjgR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313267.1;locus_tag=PHA55_RS03250;product=DUF853 domain-containing protein;protein_id=WP_001294544.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	662787	663806	.	-	.	ID=gene-PHA55_RS03255;Name=ahr;gbkey=Gene;gene=ahr;gene_biotype=protein_coding;locus_tag=PHA55_RS03255;old_locus_tag=PHA55_03255
NZ_CP116044.1	Protein Homology	CDS	662787	663806	.	-	0	ID=cds-WP_001307549.1;Parent=gene-PHA55_RS03255;Dbxref=Genbank:WP_001307549.1;Name=WP_001307549.1;gbkey=CDS;gene=ahr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418690.4;locus_tag=PHA55_RS03255;product=NADPH-dependent aldehyde reductase Ahr;protein_id=WP_001307549.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	664002	664086	.	+	.	ID=gene-PHA55_RS03260;Name=PHA55_RS03260;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS03260;old_locus_tag=PHA55_03260
NZ_CP116044.1	tRNAscan-SE	tRNA	664002	664086	.	+	.	ID=rna-PHA55_RS03260;Parent=gene-PHA55_RS03260;anticodon=(pos:664036..664038);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS03260;product=tRNA-Leu
NZ_CP116044.1	tRNAscan-SE	exon	664002	664086	.	+	.	ID=exon-PHA55_RS03260-1;Parent=rna-PHA55_RS03260;anticodon=(pos:664036..664038);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS03260;product=tRNA-Leu
NZ_CP116044.1	RefSeq	gene	664477	667368	.	+	.	ID=gene-PHA55_RS03265;Name=PHA55_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS03265;old_locus_tag=PHA55_03265
NZ_CP116044.1	Protein Homology	CDS	664477	667368	.	+	0	ID=cds-WP_000580533.1;Parent=gene-PHA55_RS03265;Dbxref=Genbank:WP_000580533.1;Name=WP_000580533.1;Ontology_term=GO:0005524,GO:0140658;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016230790.1;locus_tag=PHA55_RS03265;product=SNF2-related protein;protein_id=WP_000580533.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	667389	670511	.	+	.	ID=gene-PHA55_RS03270;Name=PHA55_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS03270;old_locus_tag=PHA55_03270
NZ_CP116044.1	Protein Homology	CDS	667389	670511	.	+	0	ID=cds-WP_000049822.1;Parent=gene-PHA55_RS03270;Dbxref=Genbank:WP_000049822.1;Name=WP_000049822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000049823.1;locus_tag=PHA55_RS03270;product=site-specific DNA-methyltransferase;protein_id=WP_000049822.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	670514	673894	.	+	.	ID=gene-PHA55_RS03275;Name=PHA55_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS03275;old_locus_tag=PHA55_03275
NZ_CP116044.1	Protein Homology	CDS	670514	673894	.	+	0	ID=cds-WP_049589499.1;Parent=gene-PHA55_RS03275;Dbxref=Genbank:WP_049589499.1;Name=WP_049589499.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395336.1;locus_tag=PHA55_RS03275;product=DEAD/DEAH box helicase family protein;protein_id=WP_049589499.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	673941	674243	.	-	.	ID=gene-PHA55_RS03280;Name=PHA55_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS03280;old_locus_tag=PHA55_03280
NZ_CP116044.1	Protein Homology	CDS	673941	674243	.	-	0	ID=cds-WP_000421878.1;Parent=gene-PHA55_RS03280;Dbxref=Genbank:WP_000421878.1;Name=WP_000421878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001507529.1;locus_tag=PHA55_RS03280;product=hypothetical protein;protein_id=WP_000421878.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	674556	675428	.	-	.	ID=gene-PHA55_RS03285;Name=PHA55_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS03285;old_locus_tag=PHA55_03285
NZ_CP116044.1	Protein Homology	CDS	674556	675428	.	-	0	ID=cds-WP_000168567.1;Parent=gene-PHA55_RS03285;Dbxref=Genbank:WP_000168567.1;Name=WP_000168567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186812.1;locus_tag=PHA55_RS03285;product=HNH endonuclease;protein_id=WP_000168567.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	675528	675632	.	+	.	ID=gene-PHA55_RS03290;Name=PHA55_RS03290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS03290;old_locus_tag=PHA55_03290;partial=true;pseudo=true;start_range=.,675528
NZ_CP116044.1	Protein Homology	CDS	675528	675632	.	+	0	ID=cds-PHA55_RS03290;Parent=gene-PHA55_RS03290;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001586610.1;locus_tag=PHA55_RS03290;partial=true;product=HNH endonuclease;pseudo=true;start_range=.,675528;transl_table=11
NZ_CP116044.1	RefSeq	gene	675640	676620	.	-	.	ID=gene-PHA55_RS03295;Name=nanS;gbkey=Gene;gene=nanS;gene_biotype=protein_coding;locus_tag=PHA55_RS03295;old_locus_tag=PHA55_03295
NZ_CP116044.1	Protein Homology	CDS	675640	676620	.	-	0	ID=cds-WP_001307552.1;Parent=gene-PHA55_RS03295;Dbxref=Genbank:WP_001307552.1;Name=WP_001307552.1;gbkey=CDS;gene=nanS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418729.1;locus_tag=PHA55_RS03295;product=sialate O-acetylesterase;protein_id=WP_001307552.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	676685	677791	.	-	.	ID=gene-PHA55_RS03300;Name=nanM;gbkey=Gene;gene=nanM;gene_biotype=protein_coding;locus_tag=PHA55_RS03300;old_locus_tag=PHA55_03300
NZ_CP116044.1	Protein Homology	CDS	676685	677791	.	-	0	ID=cds-WP_001298927.1;Parent=gene-PHA55_RS03300;Dbxref=Genbank:WP_001298927.1;Name=WP_001298927.1;gbkey=CDS;gene=nanM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418730.4;locus_tag=PHA55_RS03300;product=N-acetylneuraminate epimerase;protein_id=WP_001298927.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	677811	678527	.	-	.	ID=gene-PHA55_RS03305;Name=nanC;gbkey=Gene;gene=nanC;gene_biotype=protein_coding;locus_tag=PHA55_RS03305;old_locus_tag=PHA55_03305
NZ_CP116044.1	Protein Homology	CDS	677811	678527	.	-	0	ID=cds-WP_001295734.1;Parent=gene-PHA55_RS03305;Dbxref=Genbank:WP_001295734.1;Name=WP_001295734.1;gbkey=CDS;gene=nanC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313297.2;locus_tag=PHA55_RS03305;product=N-acetylneuraminic acid outer membrane channel NanC;protein_id=WP_001295734.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	679981	680583	.	+	.	ID=gene-PHA55_RS03310;Name=fimB;gbkey=Gene;gene=fimB;gene_biotype=protein_coding;locus_tag=PHA55_RS03310;old_locus_tag=PHA55_03310
NZ_CP116044.1	Protein Homology	CDS	679981	680583	.	+	0	ID=cds-WP_000790583.1;Parent=gene-PHA55_RS03310;Dbxref=Genbank:WP_000790583.1;Name=WP_000790583.1;gbkey=CDS;gene=fimB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313298.1;locus_tag=PHA55_RS03310;product=type 1 fimbria switch DNA invertase FimB;protein_id=WP_000790583.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	681061	681657	.	+	.	ID=gene-PHA55_RS03315;Name=fimE;gbkey=Gene;gene=fimE;gene_biotype=protein_coding;locus_tag=PHA55_RS03315;old_locus_tag=PHA55_03315
NZ_CP116044.1	Protein Homology	CDS	681061	681657	.	+	0	ID=cds-WP_000044711.1;Parent=gene-PHA55_RS03315;Dbxref=Genbank:WP_000044711.1;Name=WP_000044711.1;Note=upgraded from regulatory protein to switch DNA invertase;gbkey=CDS;gene=fimE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418733.1;locus_tag=PHA55_RS03315;product=type 1 fimbria switch DNA invertase FimE;protein_id=WP_000044711.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	682137	682685	.	+	.	ID=gene-PHA55_RS03320;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=PHA55_RS03320;old_locus_tag=PHA55_03320
NZ_CP116044.1	Protein Homology	CDS	682137	682685	.	+	0	ID=cds-WP_000695543.1;Parent=gene-PHA55_RS03320;Dbxref=Genbank:WP_000695543.1;Name=WP_000695543.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=fimA;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709921.1;locus_tag=PHA55_RS03320;product=type 1 fimbrial major subunit FimA;protein_id=WP_000695543.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	682750	683289	.	+	.	ID=gene-PHA55_RS03325;Name=fimI;gbkey=Gene;gene=fimI;gene_biotype=protein_coding;locus_tag=PHA55_RS03325;old_locus_tag=PHA55_03325
NZ_CP116044.1	Protein Homology	CDS	682750	683289	.	+	0	ID=cds-WP_000824114.1;Parent=gene-PHA55_RS03325;Dbxref=Genbank:WP_000824114.1;Name=WP_000824114.1;gbkey=CDS;gene=fimI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418735.2;locus_tag=PHA55_RS03325;product=fimbrial protein;protein_id=WP_000824114.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	683326	684051	.	+	.	ID=gene-PHA55_RS03330;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=PHA55_RS03330;old_locus_tag=PHA55_03330
NZ_CP116044.1	Protein Homology	CDS	683326	684051	.	+	0	ID=cds-WP_000066573.1;Parent=gene-PHA55_RS03330;Dbxref=Genbank:WP_000066573.1;Name=WP_000066573.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418736.3;locus_tag=PHA55_RS03330;product=type 1 fimbria chaperone FimC;protein_id=WP_000066573.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	684118	686754	.	+	.	ID=gene-PHA55_RS03335;Name=fimD;gbkey=Gene;gene=fimD;gene_biotype=protein_coding;locus_tag=PHA55_RS03335;old_locus_tag=PHA55_03335
NZ_CP116044.1	Protein Homology	CDS	684118	686754	.	+	0	ID=cds-WP_000120938.1;Parent=gene-PHA55_RS03335;Dbxref=Genbank:WP_000120938.1;Name=WP_000120938.1;gbkey=CDS;gene=fimD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313303.1;locus_tag=PHA55_RS03335;product=fimbrial usher FimD;protein_id=WP_000120938.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	686764	687294	.	+	.	ID=gene-PHA55_RS03340;Name=fimF;gbkey=Gene;gene=fimF;gene_biotype=protein_coding;locus_tag=PHA55_RS03340;old_locus_tag=PHA55_03340
NZ_CP116044.1	Protein Homology	CDS	686764	687294	.	+	0	ID=cds-WP_001244826.1;Parent=gene-PHA55_RS03340;Dbxref=Genbank:WP_001244826.1;Name=WP_001244826.1;gbkey=CDS;gene=fimF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313304.1;locus_tag=PHA55_RS03340;product=type 1 fimbria minor subunit FimF;protein_id=WP_001244826.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	687307	687810	.	+	.	ID=gene-PHA55_RS03345;Name=fimG;gbkey=Gene;gene=fimG;gene_biotype=protein_coding;locus_tag=PHA55_RS03345;old_locus_tag=PHA55_03345
NZ_CP116044.1	Protein Homology	CDS	687307	687810	.	+	0	ID=cds-WP_000872007.1;Parent=gene-PHA55_RS03345;Dbxref=Genbank:WP_000872007.1;Name=WP_000872007.1;gbkey=CDS;gene=fimG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313305.1;locus_tag=PHA55_RS03345;product=type 1 fimbria minor subunit FimG;protein_id=WP_000872007.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	687830	688732	.	+	.	ID=gene-PHA55_RS03350;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=PHA55_RS03350;old_locus_tag=PHA55_03350
NZ_CP116044.1	Protein Homology	CDS	687830	688732	.	+	0	ID=cds-WP_000832227.1;Parent=gene-PHA55_RS03350;Dbxref=Genbank:WP_000832227.1;Name=WP_000832227.1;gbkey=CDS;gene=fimH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313306.1;locus_tag=PHA55_RS03350;product=type 1 fimbria D-mannose specific adhesin FimH;protein_id=WP_000832227.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	688906	690249	.	-	.	ID=gene-PHA55_RS03355;Name=gntP;gbkey=Gene;gene=gntP;gene_biotype=protein_coding;locus_tag=PHA55_RS03355;old_locus_tag=PHA55_03355
NZ_CP116044.1	Protein Homology	CDS	688906	690249	.	-	0	ID=cds-WP_000558251.1;Parent=gene-PHA55_RS03355;Dbxref=Genbank:WP_000558251.1;Name=WP_000558251.1;gbkey=CDS;gene=gntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313307.1;locus_tag=PHA55_RS03355;product=gluconate permease GntP;protein_id=WP_000558251.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	690589	691773	.	+	.	ID=gene-PHA55_RS03360;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=PHA55_RS03360;old_locus_tag=PHA55_03360
NZ_CP116044.1	Protein Homology	CDS	690589	691773	.	+	0	ID=cds-WP_021564825.1;Parent=gene-PHA55_RS03360;Dbxref=Genbank:WP_021564825.1;Name=WP_021564825.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709912.2;locus_tag=PHA55_RS03360;product=mannonate dehydratase;protein_id=WP_021564825.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	691854	693314	.	+	.	ID=gene-PHA55_RS03365;Name=uxuB;gbkey=Gene;gene=uxuB;gene_biotype=protein_coding;locus_tag=PHA55_RS03365;old_locus_tag=PHA55_03365
NZ_CP116044.1	Protein Homology	CDS	691854	693314	.	+	0	ID=cds-WP_000208180.1;Parent=gene-PHA55_RS03365;Dbxref=Genbank:WP_000208180.1;Name=WP_000208180.1;gbkey=CDS;gene=uxuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313309.1;locus_tag=PHA55_RS03365;product=fructuronate reductase;protein_id=WP_000208180.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	693529	694302	.	+	.	ID=gene-PHA55_RS03370;Name=uxuR;gbkey=Gene;gene=uxuR;gene_biotype=protein_coding;locus_tag=PHA55_RS03370;old_locus_tag=PHA55_03370
NZ_CP116044.1	Protein Homology	CDS	693529	694302	.	+	0	ID=cds-WP_000833679.1;Parent=gene-PHA55_RS03370;Dbxref=Genbank:WP_000833679.1;Name=WP_000833679.1;gbkey=CDS;gene=uxuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418744.1;locus_tag=PHA55_RS03370;product=Uxu operon transcriptional regulator;protein_id=WP_000833679.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	694443	695273	.	-	.	ID=gene-PHA55_RS03375;Name=yjiC;gbkey=Gene;gene=yjiC;gene_biotype=protein_coding;locus_tag=PHA55_RS03375;old_locus_tag=PHA55_03375
NZ_CP116044.1	Protein Homology	CDS	694443	695273	.	-	0	ID=cds-WP_049589502.1;Parent=gene-PHA55_RS03375;Dbxref=Genbank:WP_049589502.1;Name=WP_049589502.1;gbkey=CDS;gene=yjiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313311.3;locus_tag=PHA55_RS03375;product=DUF2686 family protein;protein_id=WP_049589502.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	695607	695750	.	+	.	ID=gene-PHA55_RS03380;Name=ytiD;gbkey=Gene;gene=ytiD;gene_biotype=protein_coding;locus_tag=PHA55_RS03380;old_locus_tag=PHA55_03380
NZ_CP116044.1	Protein Homology	CDS	695607	695750	.	+	0	ID=cds-WP_001298925.1;Parent=gene-PHA55_RS03380;Dbxref=Genbank:WP_001298925.1;Name=WP_001298925.1;gbkey=CDS;gene=ytiD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518831.1;locus_tag=PHA55_RS03380;product=protein YtiD;protein_id=WP_001298925.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	695866	695949	.	+	.	ID=gene-PHA55_RS03385;Name=idlP;gbkey=Gene;gene=idlP;gene_biotype=protein_coding;locus_tag=PHA55_RS03385;old_locus_tag=PHA55_03385
NZ_CP116044.1	Protein Homology	CDS	695866	695949	.	+	0	ID=cds-WP_120795393.1;Parent=gene-PHA55_RS03385;Dbxref=Genbank:WP_120795393.1;Name=WP_120795393.1;gbkey=CDS;gene=idlP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518832.1;locus_tag=PHA55_RS03385;product=iraD leader peptide IdlP;protein_id=WP_120795393.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	695946	696338	.	+	.	ID=gene-PHA55_RS03390;Name=iraD;gbkey=Gene;gene=iraD;gene_biotype=protein_coding;locus_tag=PHA55_RS03390;old_locus_tag=PHA55_03390
NZ_CP116044.1	Protein Homology	CDS	695946	696338	.	+	0	ID=cds-WP_025651297.1;Parent=gene-PHA55_RS03390;Dbxref=Genbank:WP_025651297.1;Name=WP_025651297.1;gbkey=CDS;gene=iraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313312.2;locus_tag=PHA55_RS03390;product=anti-adapter protein IraD;protein_id=WP_025651297.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	696331	697242	.	-	.	ID=gene-PHA55_RS03395;Name=hypT;gbkey=Gene;gene=hypT;gene_biotype=protein_coding;gene_synonym=qseD;locus_tag=PHA55_RS03395;old_locus_tag=PHA55_03395
NZ_CP116044.1	Protein Homology	CDS	696331	697242	.	-	0	ID=cds-WP_000340740.1;Parent=gene-PHA55_RS03395;Dbxref=Genbank:WP_000340740.1;Name=WP_000340740.1;gbkey=CDS;gene=hypT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418747.1;locus_tag=PHA55_RS03395;product=hypochlorite stress DNA-binding transcriptional regulator HypT;protein_id=WP_000340740.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	697307	698479	.	-	.	ID=gene-PHA55_RS03400;Name=iadA;gbkey=Gene;gene=iadA;gene_biotype=protein_coding;locus_tag=PHA55_RS03400;old_locus_tag=PHA55_03400
NZ_CP116044.1	Protein Homology	CDS	697307	698479	.	-	0	ID=cds-WP_000568417.1;Parent=gene-PHA55_RS03400;Dbxref=Genbank:WP_000568417.1;Name=WP_000568417.1;Ontology_term=GO:0006508,GO:0008798;gbkey=CDS;gene=iadA;go_function=beta-aspartyl-peptidase activity|0008798||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313313.1;locus_tag=PHA55_RS03400;product=beta-aspartyl-peptidase;protein_id=WP_000568417.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	698492	698953	.	-	.	ID=gene-PHA55_RS03405;Name=yjiG;gbkey=Gene;gene=yjiG;gene_biotype=protein_coding;locus_tag=PHA55_RS03405;old_locus_tag=PHA55_03405
NZ_CP116044.1	Protein Homology	CDS	698492	698953	.	-	0	ID=cds-WP_000211971.1;Parent=gene-PHA55_RS03405;Dbxref=Genbank:WP_000211971.1;Name=WP_000211971.1;gbkey=CDS;gene=yjiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313314.1;locus_tag=PHA55_RS03405;product=YjiG family protein;protein_id=WP_000211971.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	698950	699633	.	-	.	ID=gene-PHA55_RS03410;Name=yjiH;gbkey=Gene;gene=yjiH;gene_biotype=protein_coding;locus_tag=PHA55_RS03410;old_locus_tag=PHA55_03410
NZ_CP116044.1	Protein Homology	CDS	698950	699633	.	-	0	ID=cds-WP_001295597.1;Parent=gene-PHA55_RS03410;Dbxref=Genbank:WP_001295597.1;Name=WP_001295597.1;gbkey=CDS;gene=yjiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418750.2;locus_tag=PHA55_RS03410;product=nucleoside recognition domain-containing protein;protein_id=WP_001295597.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	699883	700437	.	+	.	ID=gene-PHA55_RS03415;Name=kptA;gbkey=Gene;gene=kptA;gene_biotype=protein_coding;locus_tag=PHA55_RS03415;old_locus_tag=PHA55_03415
NZ_CP116044.1	Protein Homology	CDS	699883	700437	.	+	0	ID=cds-WP_001151854.1;Parent=gene-PHA55_RS03415;Dbxref=Genbank:WP_001151854.1;Name=WP_001151854.1;gbkey=CDS;gene=kptA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151849.1;locus_tag=PHA55_RS03415;product=RNA 2'-phosphotransferase;protein_id=WP_001151854.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	700450	701628	.	-	.	ID=gene-PHA55_RS03420;Name=yjiJ;gbkey=Gene;gene=yjiJ;gene_biotype=protein_coding;locus_tag=PHA55_RS03420;old_locus_tag=PHA55_03420
NZ_CP116044.1	Protein Homology	CDS	700450	701628	.	-	0	ID=cds-WP_001141204.1;Parent=gene-PHA55_RS03420;Dbxref=Genbank:WP_001141204.1;Name=WP_001141204.1;gbkey=CDS;gene=yjiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418752.1;locus_tag=PHA55_RS03420;product=MFS transporter;protein_id=WP_001141204.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	701696	702556	.	-	.	ID=gene-PHA55_RS03425;Name=yjiK;gbkey=Gene;gene=yjiK;gene_biotype=protein_coding;locus_tag=PHA55_RS03425;old_locus_tag=PHA55_03425
NZ_CP116044.1	Protein Homology	CDS	701696	702556	.	-	0	ID=cds-WP_001298932.1;Parent=gene-PHA55_RS03425;Dbxref=Genbank:WP_001298932.1;Name=WP_001298932.1;gbkey=CDS;gene=yjiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418753.3;locus_tag=PHA55_RS03425;product=YjiK family protein;protein_id=WP_001298932.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	702621	702878	.	-	.	ID=gene-PHA55_RS03430;Name=ytiA;gbkey=Gene;gene=ytiA;gene_biotype=protein_coding;locus_tag=PHA55_RS03430;old_locus_tag=PHA55_03430
NZ_CP116044.1	Protein Homology	CDS	702621	702878	.	-	0	ID=cds-WP_000657676.1;Parent=gene-PHA55_RS03430;Dbxref=Genbank:WP_000657676.1;Name=WP_000657676.1;gbkey=CDS;gene=ytiA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518833.1;locus_tag=PHA55_RS03430;product=DUF3343 domain-containing protein;protein_id=WP_000657676.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	702875	703642	.	-	.	ID=gene-PHA55_RS03435;Name=yjiL;gbkey=Gene;gene=yjiL;gene_biotype=protein_coding;locus_tag=PHA55_RS03435;old_locus_tag=PHA55_03435
NZ_CP116044.1	Protein Homology	CDS	702875	703642	.	-	0	ID=cds-WP_000222495.1;Parent=gene-PHA55_RS03435;Dbxref=Genbank:WP_000222495.1;Name=WP_000222495.1;Note=YjiL%2C as found in Escherichia coli%2C is a homolog of the activator ATPases of enzymes such as lactoyl-CoA dehydratase%2C (R)-phenyllactate dehydratase%2C and 2-hydroxyisocaproyl-CoA dehydratase. The typical substrate of those enzymes is acyl-CoA with an OH at the beta-position. YjiL is the putative activator for the cognate protein YjiM%2C a putative 2-hydroxyacyl-CoA dehydratase with unknown specificity%2C encoded by the adjacent gene.;gbkey=CDS;gene=yjiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313324.1;locus_tag=PHA55_RS03435;product=putative 2-hydroxyacyl-CoA dehydratase activator YjiL;protein_id=WP_000222495.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	703652	704803	.	-	.	ID=gene-PHA55_RS03440;Name=yjiM;gbkey=Gene;gene=yjiM;gene_biotype=protein_coding;locus_tag=PHA55_RS03440;old_locus_tag=PHA55_03440
NZ_CP116044.1	Protein Homology	CDS	703652	704803	.	-	0	ID=cds-WP_001298930.1;Parent=gene-PHA55_RS03440;Dbxref=Genbank:WP_001298930.1;Name=WP_001298930.1;gbkey=CDS;gene=yjiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418755.4;locus_tag=PHA55_RS03440;product=double-cubane-cluster-containing anaerobic reductase;protein_id=WP_001298930.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	704919	706199	.	-	.	ID=gene-PHA55_RS03445;Name=yjiN;gbkey=Gene;gene=yjiN;gene_biotype=protein_coding;locus_tag=PHA55_RS03445;old_locus_tag=PHA55_03445
NZ_CP116044.1	Protein Homology	CDS	704919	706199	.	-	0	ID=cds-WP_001037393.1;Parent=gene-PHA55_RS03445;Dbxref=Genbank:WP_001037393.1;Name=WP_001037393.1;gbkey=CDS;gene=yjiN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418756.1;locus_tag=PHA55_RS03445;product=DUF445 domain-containing protein;protein_id=WP_001037393.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	706240	707472	.	-	.	ID=gene-PHA55_RS03450;Name=mdtM;gbkey=Gene;gene=mdtM;gene_biotype=protein_coding;locus_tag=PHA55_RS03450;old_locus_tag=PHA55_03450
NZ_CP116044.1	Protein Homology	CDS	706240	707472	.	-	0	ID=cds-WP_001137002.1;Parent=gene-PHA55_RS03450;Dbxref=Genbank:WP_001137002.1;Name=WP_001137002.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtM;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313327.1;locus_tag=PHA55_RS03450;product=multidrug efflux MFS transporter MdtM;protein_id=WP_001137002.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	707939	708895	.	+	.	ID=gene-PHA55_RS03455;Name=PHA55_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS03455;old_locus_tag=PHA55_03455
NZ_CP116044.1	Protein Homology	CDS	707939	708895	.	+	0	ID=cds-WP_057107024.1;Parent=gene-PHA55_RS03455;Dbxref=Genbank:WP_057107024.1;Name=WP_057107024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001678496.1;locus_tag=PHA55_RS03455;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_057107024.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	709138	710550	.	-	.	ID=gene-PHA55_RS03460;Name=yjiR;gbkey=Gene;gene=yjiR;gene_biotype=protein_coding;locus_tag=PHA55_RS03460;old_locus_tag=PHA55_03460
NZ_CP116044.1	Protein Homology	CDS	709138	710550	.	-	0	ID=cds-WP_000199283.1;Parent=gene-PHA55_RS03460;Dbxref=Genbank:WP_000199283.1;Name=WP_000199283.1;gbkey=CDS;gene=yjiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418760.1;locus_tag=PHA55_RS03460;product=PLP-dependent aminotransferase family protein;protein_id=WP_000199283.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	710727	710891	.	+	.	ID=gene-PHA55_RS03465;Name=yjiS;gbkey=Gene;gene=yjiS;gene_biotype=protein_coding;locus_tag=PHA55_RS03465;old_locus_tag=PHA55_03465
NZ_CP116044.1	Protein Homology	CDS	710727	710891	.	+	0	ID=cds-WP_000394276.1;Parent=gene-PHA55_RS03465;Dbxref=Genbank:WP_000394276.1;Name=WP_000394276.1;gbkey=CDS;gene=yjiS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008786105.1;locus_tag=PHA55_RS03465;product=DUF1127 domain-containing protein;protein_id=WP_000394276.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	710988	711870	.	+	.	ID=gene-PHA55_RS03470;Name=PHA55_RS03470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS03470;old_locus_tag=PHA55_03470;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	710988	711870	.	+	0	ID=cds-PHA55_RS03470;Parent=gene-PHA55_RS03470;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313331.1;locus_tag=PHA55_RS03470;product=DUF262 domain-containing protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	711918	713081	.	+	.	ID=gene-PHA55_RS03475;Name=PHA55_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS03475;old_locus_tag=PHA55_03475
NZ_CP116044.1	Protein Homology	CDS	711918	713081	.	+	0	ID=cds-WP_096925719.1;Parent=gene-PHA55_RS03475;Dbxref=Genbank:WP_096925719.1;Name=WP_096925719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313332.1;locus_tag=PHA55_RS03475;product=DUF1524 domain-containing protein;protein_id=WP_096925719.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	713128	713469	.	-	.	ID=gene-PHA55_RS03480;Name=symE;gbkey=Gene;gene=symE;gene_biotype=protein_coding;locus_tag=PHA55_RS03480;old_locus_tag=PHA55_03480
NZ_CP116044.1	Protein Homology	CDS	713128	713469	.	-	0	ID=cds-WP_057107025.1;Parent=gene-PHA55_RS03480;Dbxref=Genbank:WP_057107025.1;Name=WP_057107025.1;gbkey=CDS;gene=symE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418767.4;locus_tag=PHA55_RS03480;product=endoribonuclease SymE;protein_id=WP_057107025.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	713690	715441	.	-	.	ID=gene-PHA55_RS03485;Name=PHA55_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS03485;old_locus_tag=PHA55_03485
NZ_CP116044.1	Protein Homology	CDS	713690	715441	.	-	0	ID=cds-WP_000110087.1;Parent=gene-PHA55_RS03485;Dbxref=Genbank:WP_000110087.1;Name=WP_000110087.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110087.1;locus_tag=PHA55_RS03485;product=restriction endonuclease subunit S;protein_id=WP_000110087.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	715441	716910	.	-	.	ID=gene-PHA55_RS03490;Name=PHA55_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS03490;old_locus_tag=PHA55_03490
NZ_CP116044.1	Protein Homology	CDS	715441	716910	.	-	0	ID=cds-WP_001387312.1;Parent=gene-PHA55_RS03490;Dbxref=Genbank:WP_001387312.1;Name=WP_001387312.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313334.2;locus_tag=PHA55_RS03490;product=type I restriction-modification system subunit M;protein_id=WP_001387312.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	716977	719409	.	-	.	ID=gene-PHA55_RS03495;Name=PHA55_RS03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS03495;old_locus_tag=PHA55_03495
NZ_CP116044.1	Protein Homology	CDS	716977	719409	.	-	0	ID=cds-WP_001593930.1;Parent=gene-PHA55_RS03495;Dbxref=Genbank:WP_001593930.1;Name=WP_001593930.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313335.1;locus_tag=PHA55_RS03495;product=DEAD/DEAH box helicase family protein;protein_id=WP_001593930.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	719550	720518	.	+	.	ID=gene-PHA55_RS03500;Name=PHA55_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS03500;old_locus_tag=PHA55_03500
NZ_CP116044.1	Protein Homology	CDS	719550	720518	.	+	0	ID=cds-WP_260589875.1;Parent=gene-PHA55_RS03500;Dbxref=Genbank:WP_260589875.1;Name=WP_260589875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724322.1;locus_tag=PHA55_RS03500;product=hypothetical protein;protein_id=WP_260589875.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	720558	720749	.	+	.	ID=gene-PHA55_RS03505;Name=PHA55_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS03505;old_locus_tag=PHA55_03505
NZ_CP116044.1	Protein Homology	CDS	720558	720749	.	+	0	ID=cds-WP_000063145.1;Parent=gene-PHA55_RS03505;Dbxref=Genbank:WP_000063145.1;Name=WP_000063145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063145.1;locus_tag=PHA55_RS03505;product=antitoxin;protein_id=WP_000063145.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	720836	721792	.	-	.	ID=gene-PHA55_RS03510;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=PHA55_RS03510;old_locus_tag=PHA55_03510
NZ_CP116044.1	Protein Homology	CDS	720836	721792	.	-	0	ID=cds-WP_001347557.1;Parent=gene-PHA55_RS03510;Dbxref=Genbank:WP_001347557.1;Name=WP_001347557.1;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313338.2;locus_tag=PHA55_RS03510;product=GTPase;protein_id=WP_001347557.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	721803	722006	.	-	.	ID=gene-PHA55_RS03515;Name=yjiX;gbkey=Gene;gene=yjiX;gene_biotype=protein_coding;locus_tag=PHA55_RS03515;old_locus_tag=PHA55_03515
NZ_CP116044.1	Protein Homology	CDS	721803	722006	.	-	0	ID=cds-WP_113335868.1;Parent=gene-PHA55_RS03515;Dbxref=Genbank:WP_113335868.1;Name=WP_113335868.1;gbkey=CDS;gene=yjiX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313339.1;locus_tag=PHA55_RS03515;product=YbdD/YjiX family protein;protein_id=WP_113335868.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	722056	724206	.	-	.	ID=gene-PHA55_RS03520;Name=btsT;gbkey=Gene;gene=btsT;gene_biotype=protein_coding;locus_tag=PHA55_RS03520;old_locus_tag=PHA55_03520
NZ_CP116044.1	Protein Homology	CDS	722056	724206	.	-	0	ID=cds-WP_001298933.1;Parent=gene-PHA55_RS03520;Dbxref=Genbank:WP_001298933.1;Name=WP_001298933.1;gbkey=CDS;gene=btsT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313340.2;locus_tag=PHA55_RS03520;product=pyruvate/proton symporter BtsT;protein_id=WP_001298933.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	724599	725111	.	-	.	ID=gene-PHA55_RS03525;Name=PHA55_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS03525;old_locus_tag=PHA55_03525
NZ_CP116044.1	Protein Homology	CDS	724599	725111	.	-	0	ID=cds-WP_001175455.1;Parent=gene-PHA55_RS03525;Dbxref=Genbank:WP_001175455.1;Name=WP_001175455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710082.1;locus_tag=PHA55_RS03525;product=4-hydroxyphenylacetate 3-monooxygenase reductase subunit;protein_id=WP_001175455.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	725129	726691	.	-	.	ID=gene-PHA55_RS03530;Name=hpaB;gbkey=Gene;gene=hpaB;gene_biotype=protein_coding;locus_tag=PHA55_RS03530;old_locus_tag=PHA55_03530
NZ_CP116044.1	Protein Homology	CDS	725129	726691	.	-	0	ID=cds-WP_000801473.1;Parent=gene-PHA55_RS03530;Dbxref=Genbank:WP_000801473.1;Name=WP_000801473.1;gbkey=CDS;gene=hpaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801462.1;locus_tag=PHA55_RS03530;product=4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component;protein_id=WP_000801473.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	726942	727832	.	-	.	ID=gene-PHA55_RS03535;Name=hpaA;gbkey=Gene;gene=hpaA;gene_biotype=protein_coding;locus_tag=PHA55_RS03535;old_locus_tag=PHA55_03535
NZ_CP116044.1	Protein Homology	CDS	726942	727832	.	-	0	ID=cds-WP_000332891.1;Parent=gene-PHA55_RS03535;Dbxref=Genbank:WP_000332891.1;Name=WP_000332891.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=hpaA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801836.1;locus_tag=PHA55_RS03535;product=4-hydroxyphenylacetate catabolism regulatory protein HpaA;protein_id=WP_000332891.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	727842	729218	.	-	.	ID=gene-PHA55_RS03540;Name=hpaX;gbkey=Gene;gene=hpaX;gene_biotype=protein_coding;locus_tag=PHA55_RS03540;old_locus_tag=PHA55_03540
NZ_CP116044.1	Protein Homology	CDS	727842	729218	.	-	0	ID=cds-WP_001285769.1;Parent=gene-PHA55_RS03540;Dbxref=Genbank:WP_001285769.1;Name=WP_001285769.1;Ontology_term=GO:0055085,GO:1900754,GO:1901241;gbkey=CDS;gene=hpaX;go_function=4-hydroxyphenylacetate transmembrane transporter activity|1901241||IEA;go_process=transmembrane transport|0055085||IEA,4-hydroxyphenylacetate transport|1900754||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460080.1;locus_tag=PHA55_RS03540;product=4-hydroxyphenylacetate permease;protein_id=WP_001285769.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	729393	730181	.	-	.	ID=gene-PHA55_RS03545;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=PHA55_RS03545;old_locus_tag=PHA55_03545
NZ_CP116044.1	Protein Homology	CDS	729393	730181	.	-	0	ID=cds-WP_000431705.1;Parent=gene-PHA55_RS03545;Dbxref=Genbank:WP_000431705.1;Name=WP_000431705.1;Ontology_term=GO:0018802;gbkey=CDS;gene=hpaI;go_function=2%2C4-dihydroxyhept-2-ene-1%2C7-dioate aldolase activity|0018802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966060.1;locus_tag=PHA55_RS03545;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=WP_000431705.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	730192	730995	.	-	.	ID=gene-PHA55_RS03550;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=protein_coding;locus_tag=PHA55_RS03550;old_locus_tag=PHA55_03550
NZ_CP116044.1	Protein Homology	CDS	730192	730995	.	-	0	ID=cds-WP_000459750.1;Parent=gene-PHA55_RS03550;Dbxref=Genbank:WP_000459750.1;Name=WP_000459750.1;Ontology_term=GO:0018817;gbkey=CDS;gene=hpaH;go_function=2-oxo-hept-3-ene-1%2C7-dioate hydratase activity|0018817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710089.2;locus_tag=PHA55_RS03550;product=2-oxo-hepta-3-ene-1%2C7-dioic acid hydratase;protein_id=WP_000459750.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	731106	731486	.	-	.	ID=gene-PHA55_RS03555;Name=PHA55_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS03555;old_locus_tag=PHA55_03555
NZ_CP116044.1	Protein Homology	CDS	731106	731486	.	-	0	ID=cds-WP_001119864.1;Parent=gene-PHA55_RS03555;Dbxref=Genbank:WP_001119864.1;Name=WP_001119864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710090.1;locus_tag=PHA55_RS03555;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WP_001119864.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	731496	732347	.	-	.	ID=gene-PHA55_RS03560;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=PHA55_RS03560;old_locus_tag=PHA55_03560
NZ_CP116044.1	Protein Homology	CDS	731496	732347	.	-	0	ID=cds-WP_000516990.1;Parent=gene-PHA55_RS03560;Dbxref=Genbank:WP_000516990.1;Name=WP_000516990.1;Ontology_term=GO:0006725,GO:0008198,GO:0008687;gbkey=CDS;gene=hpaD;go_function=ferrous iron binding|0008198||IEA,3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase activity|0008687||IEA;go_process=cellular aromatic compound metabolic process|0006725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710091.1;locus_tag=PHA55_RS03560;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_000516990.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	732349	733815	.	-	.	ID=gene-PHA55_RS03565;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=protein_coding;locus_tag=PHA55_RS03565;old_locus_tag=PHA55_03565
NZ_CP116044.1	Protein Homology	CDS	732349	733815	.	-	0	ID=cds-WP_000757512.1;Parent=gene-PHA55_RS03565;Dbxref=Genbank:WP_000757512.1;Name=WP_000757512.1;Ontology_term=GO:1901023,GO:0018480;gbkey=CDS;gene=hpaE;go_function=5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity|0018480||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710092.1;locus_tag=PHA55_RS03565;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;protein_id=WP_000757512.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	733812	735101	.	-	.	ID=gene-PHA55_RS03570;Name=hpaG;gbkey=Gene;gene=hpaG;gene_biotype=protein_coding;locus_tag=PHA55_RS03570;old_locus_tag=PHA55_03570
NZ_CP116044.1	Protein Homology	CDS	733812	735101	.	-	0	ID=cds-WP_000679092.1;Parent=gene-PHA55_RS03570;Dbxref=Genbank:WP_000679092.1;Name=WP_000679092.1;Ontology_term=GO:1901023,GO:0008704,GO:0018800;gbkey=CDS;gene=hpaG;go_function=5-carboxymethyl-2-hydroxymuconate delta-isomerase activity|0008704||IEA,5-oxopent-3-ene-1%2C2%2C5-tricarboxylate decarboxylase activity|0018800||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710093.2;locus_tag=PHA55_RS03570;product=4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase;protein_id=WP_000679092.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	735373	735819	.	+	.	ID=gene-PHA55_RS03575;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=PHA55_RS03575;old_locus_tag=PHA55_03575
NZ_CP116044.1	Protein Homology	CDS	735373	735819	.	+	0	ID=cds-WP_000543915.1;Parent=gene-PHA55_RS03575;Dbxref=Genbank:WP_000543915.1;Name=WP_000543915.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=hpaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710094.1;locus_tag=PHA55_RS03575;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=WP_000543915.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	735938	737602	.	+	.	ID=gene-PHA55_RS03580;Name=tsr;gbkey=Gene;gene=tsr;gene_biotype=protein_coding;locus_tag=PHA55_RS03580;old_locus_tag=PHA55_03580
NZ_CP116044.1	Protein Homology	CDS	735938	737602	.	+	0	ID=cds-WP_000919567.1;Parent=gene-PHA55_RS03580;Dbxref=Genbank:WP_000919567.1;Name=WP_000919567.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tsr;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313342.1;locus_tag=PHA55_RS03580;product=methyl-accepting chemotaxis protein;protein_id=WP_000919567.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	737651	739012	.	-	.	ID=gene-PHA55_RS03585;Name=lgoT;gbkey=Gene;gene=lgoT;gene_biotype=protein_coding;locus_tag=PHA55_RS03585;old_locus_tag=PHA55_03585
NZ_CP116044.1	Protein Homology	CDS	737651	739012	.	-	0	ID=cds-WP_271287497.1;Parent=gene-PHA55_RS03585;Dbxref=Genbank:WP_271287497.1;Name=WP_271287497.1;gbkey=CDS;gene=lgoT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313343.1;locus_tag=PHA55_RS03585;product=MFS transporter;protein_id=WP_271287497.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	739227	740141	.	-	.	ID=gene-PHA55_RS03590;Name=lgoR;gbkey=Gene;gene=lgoR;gene_biotype=protein_coding;locus_tag=PHA55_RS03590;old_locus_tag=PHA55_03590
NZ_CP116044.1	Protein Homology	CDS	739227	740141	.	-	0	ID=cds-WP_000091572.1;Parent=gene-PHA55_RS03590;Dbxref=Genbank:WP_000091572.1;Name=WP_000091572.1;gbkey=CDS;gene=lgoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313344.2;locus_tag=PHA55_RS03590;product=GntR family transcriptional regulator;protein_id=WP_000091572.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	740280	741302	.	+	.	ID=gene-PHA55_RS03595;Name=lgoD;gbkey=Gene;gene=lgoD;gene_biotype=protein_coding;locus_tag=PHA55_RS03595;old_locus_tag=PHA55_03595
NZ_CP116044.1	Protein Homology	CDS	740280	741302	.	+	0	ID=cds-WP_000106030.1;Parent=gene-PHA55_RS03595;Dbxref=Genbank:WP_000106030.1;Name=WP_000106030.1;gbkey=CDS;gene=lgoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418778.4;locus_tag=PHA55_RS03595;product=L-galactonate oxidoreductase;protein_id=WP_000106030.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	741441	743732	.	-	.	ID=gene-PHA55_RS03600;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=PHA55_RS03600;old_locus_tag=PHA55_03600
NZ_CP116044.1	Protein Homology	CDS	741441	743732	.	-	0	ID=cds-WP_137505216.1;Parent=gene-PHA55_RS03600;Dbxref=Genbank:WP_137505216.1;Name=WP_137505216.1;Ontology_term=GO:0008484;gbkey=CDS;gene=opgB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418779.2;locus_tag=PHA55_RS03600;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=WP_137505216.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	743986	744480	.	-	.	ID=gene-PHA55_RS03605;Name=yjjA;gbkey=Gene;gene=yjjA;gene_biotype=protein_coding;locus_tag=PHA55_RS03605;old_locus_tag=PHA55_03605
NZ_CP116044.1	Protein Homology	CDS	743986	744480	.	-	0	ID=cds-WP_001308243.1;Parent=gene-PHA55_RS03605;Dbxref=Genbank:WP_001308243.1;Name=WP_001308243.1;gbkey=CDS;gene=yjjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418780.2;locus_tag=PHA55_RS03605;product=DUF2501 domain-containing protein YjjA;protein_id=WP_001308243.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	744529	745266	.	-	.	ID=gene-PHA55_RS03610;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=PHA55_RS03610;old_locus_tag=PHA55_03610
NZ_CP116044.1	Protein Homology	CDS	744529	745266	.	-	0	ID=cds-WP_000799911.1;Parent=gene-PHA55_RS03610;Dbxref=Genbank:WP_000799911.1;Name=WP_000799911.1;gbkey=CDS;gene=dnaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313348.1;locus_tag=PHA55_RS03610;product=DNA replication protein DnaC;protein_id=WP_000799911.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	745269	745808	.	-	.	ID=gene-PHA55_RS03615;Name=dnaT;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;locus_tag=PHA55_RS03615;old_locus_tag=PHA55_03615
NZ_CP116044.1	Protein Homology	CDS	745269	745808	.	-	0	ID=cds-WP_000098818.1;Parent=gene-PHA55_RS03615;Dbxref=Genbank:WP_000098818.1;Name=WP_000098818.1;gbkey=CDS;gene=dnaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418782.1;locus_tag=PHA55_RS03615;product=primosomal protein DnaT;protein_id=WP_000098818.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	745915	746388	.	-	.	ID=gene-PHA55_RS03620;Name=yjjB;gbkey=Gene;gene=yjjB;gene_biotype=protein_coding;locus_tag=PHA55_RS03620;old_locus_tag=PHA55_03620
NZ_CP116044.1	Protein Homology	CDS	745915	746388	.	-	0	ID=cds-WP_000538188.1;Parent=gene-PHA55_RS03620;Dbxref=Genbank:WP_000538188.1;Name=WP_000538188.1;gbkey=CDS;gene=yjjB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418783.2;locus_tag=PHA55_RS03620;product=threonine/serine exporter;protein_id=WP_000538188.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	746379	747149	.	-	.	ID=gene-PHA55_RS03625;Name=yjjP;gbkey=Gene;gene=yjjP;gene_biotype=protein_coding;locus_tag=PHA55_RS03625;old_locus_tag=PHA55_03625
NZ_CP116044.1	Protein Homology	CDS	746379	747149	.	-	0	ID=cds-WP_001340933.1;Parent=gene-PHA55_RS03625;Dbxref=Genbank:WP_001340933.1;Name=WP_001340933.1;gbkey=CDS;gene=yjjP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418784.4;locus_tag=PHA55_RS03625;product=threonine/serine exporter ThrE family protein;protein_id=WP_001340933.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	747768	748493	.	+	.	ID=gene-PHA55_RS03630;Name=yjjQ;gbkey=Gene;gene=yjjQ;gene_biotype=protein_coding;locus_tag=PHA55_RS03630;old_locus_tag=PHA55_03630
NZ_CP116044.1	Protein Homology	CDS	747768	748493	.	+	0	ID=cds-WP_000936630.1;Parent=gene-PHA55_RS03630;Dbxref=Genbank:WP_000936630.1;Name=WP_000936630.1;gbkey=CDS;gene=yjjQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313352.1;locus_tag=PHA55_RS03630;product=response regulator transcription factor;protein_id=WP_000936630.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	748451	749128	.	+	.	ID=gene-PHA55_RS03635;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;locus_tag=PHA55_RS03635;old_locus_tag=PHA55_03635
NZ_CP116044.1	Protein Homology	CDS	748451	749128	.	+	0	ID=cds-WP_001300509.1;Parent=gene-PHA55_RS03635;Dbxref=Genbank:WP_001300509.1;Name=WP_001300509.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=bglJ;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418786.4;locus_tag=PHA55_RS03635;product=DNA-binding transcriptional activator BglJ;protein_id=WP_001300509.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	749166	749954	.	-	.	ID=gene-PHA55_RS03640;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=PHA55_RS03640;old_locus_tag=PHA55_03640
NZ_CP116044.1	Protein Homology	CDS	749166	749954	.	-	0	ID=cds-WP_000331602.1;Parent=gene-PHA55_RS03640;Dbxref=Genbank:WP_000331602.1;Name=WP_000331602.1;Ontology_term=GO:0051537;gbkey=CDS;gene=fhuF;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313354.1;locus_tag=PHA55_RS03640;product=siderophore-iron reductase FhuF;protein_id=WP_000331602.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	750095	750331	.	+	.	ID=gene-PHA55_RS03645;Name=yjjZ;gbkey=Gene;gene=yjjZ;gene_biotype=protein_coding;locus_tag=PHA55_RS03645;old_locus_tag=PHA55_03645
NZ_CP116044.1	Protein Homology	CDS	750095	750331	.	+	0	ID=cds-WP_001350028.1;Parent=gene-PHA55_RS03645;Dbxref=Genbank:WP_001350028.1;Name=WP_001350028.1;gbkey=CDS;gene=yjjZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313355.3;locus_tag=PHA55_RS03645;product=DUF1435 domain-containing protein;protein_id=WP_001350028.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	750370	750456	.	-	.	ID=gene-PHA55_RS03650;Name=PHA55_RS03650;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS03650;old_locus_tag=PHA55_03650
NZ_CP116044.1	tRNAscan-SE	tRNA	750370	750456	.	-	.	ID=rna-PHA55_RS03650;Parent=gene-PHA55_RS03650;anticodon=(pos:complement(750420..750422));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS03650;product=tRNA-Leu
NZ_CP116044.1	tRNAscan-SE	exon	750370	750456	.	-	.	ID=exon-PHA55_RS03650-1;Parent=rna-PHA55_RS03650;anticodon=(pos:complement(750420..750422));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS03650;product=tRNA-Leu
NZ_CP116044.1	RefSeq	gene	750491	750577	.	-	.	ID=gene-PHA55_RS03655;Name=PHA55_RS03655;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS03655;old_locus_tag=PHA55_03655
NZ_CP116044.1	tRNAscan-SE	tRNA	750491	750577	.	-	.	ID=rna-PHA55_RS03655;Parent=gene-PHA55_RS03655;anticodon=(pos:complement(750541..750543));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS03655;product=tRNA-Leu
NZ_CP116044.1	tRNAscan-SE	exon	750491	750577	.	-	.	ID=exon-PHA55_RS03655-1;Parent=rna-PHA55_RS03655;anticodon=(pos:complement(750541..750543));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS03655;product=tRNA-Leu
NZ_CP116044.1	RefSeq	gene	750606	750692	.	-	.	ID=gene-PHA55_RS03660;Name=PHA55_RS03660;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS03660;old_locus_tag=PHA55_03660
NZ_CP116044.1	tRNAscan-SE	tRNA	750606	750692	.	-	.	ID=rna-PHA55_RS03660;Parent=gene-PHA55_RS03660;anticodon=(pos:complement(750656..750658));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS03660;product=tRNA-Leu
NZ_CP116044.1	tRNAscan-SE	exon	750606	750692	.	-	.	ID=exon-PHA55_RS03660-1;Parent=rna-PHA55_RS03660;anticodon=(pos:complement(750656..750658));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS03660;product=tRNA-Leu
NZ_CP116044.1	RefSeq	gene	750960	751991	.	-	.	ID=gene-PHA55_RS03665;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=PHA55_RS03665;old_locus_tag=PHA55_03665
NZ_CP116044.1	Protein Homology	CDS	750960	751991	.	-	0	ID=cds-WP_001272319.1;Parent=gene-PHA55_RS03665;Dbxref=Genbank:WP_001272319.1;Name=WP_001272319.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313356.1;locus_tag=PHA55_RS03665;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_001272319.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	752094	752507	.	+	.	ID=gene-PHA55_RS03670;Name=holD;gbkey=Gene;gene=holD;gene_biotype=protein_coding;locus_tag=PHA55_RS03670;old_locus_tag=PHA55_03670
NZ_CP116044.1	Protein Homology	CDS	752094	752507	.	+	0	ID=cds-WP_000204018.1;Parent=gene-PHA55_RS03670;Dbxref=Genbank:WP_000204018.1;Name=WP_000204018.1;gbkey=CDS;gene=holD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313357.1;locus_tag=PHA55_RS03670;product=DNA polymerase III subunit psi;protein_id=WP_000204018.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	752476	752922	.	+	.	ID=gene-PHA55_RS03675;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=PHA55_RS03675;old_locus_tag=PHA55_03675
NZ_CP116044.1	Protein Homology	CDS	752476	752922	.	+	0	ID=cds-WP_001092465.1;Parent=gene-PHA55_RS03675;Dbxref=Genbank:WP_001092465.1;Name=WP_001092465.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313358.1;locus_tag=PHA55_RS03675;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_001092465.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	752937	753614	.	+	.	ID=gene-PHA55_RS03680;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=PHA55_RS03680;old_locus_tag=PHA55_03680
NZ_CP116044.1	Protein Homology	CDS	752937	753614	.	+	0	ID=cds-WP_087893602.1;Parent=gene-PHA55_RS03680;Dbxref=Genbank:WP_087893602.1;Name=WP_087893602.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710113.1;locus_tag=PHA55_RS03680;product=pyrimidine 5'-nucleotidase;protein_id=WP_087893602.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	753705	755294	.	+	.	ID=gene-PHA55_RS03685;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=PHA55_RS03685;old_locus_tag=PHA55_03685
NZ_CP116044.1	Protein Homology	CDS	753705	755294	.	+	0	ID=cds-WP_000175943.1;Parent=gene-PHA55_RS03685;Dbxref=Genbank:WP_000175943.1;Name=WP_000175943.1;Ontology_term=GO:0006415,GO:0003747,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313360.1;locus_tag=PHA55_RS03685;product=peptide chain release factor 3;protein_id=WP_000175943.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	755687	756292	.	+	.	ID=gene-PHA55_RS03690;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=PHA55_RS03690;old_locus_tag=PHA55_03690
NZ_CP116044.1	Protein Homology	CDS	755687	756292	.	+	0	ID=cds-WP_001295748.1;Parent=gene-PHA55_RS03690;Dbxref=Genbank:WP_001295748.1;Name=WP_001295748.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418793.1;locus_tag=PHA55_RS03690;product=molecular chaperone OsmY;protein_id=WP_001295748.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	756419	756580	.	+	.	ID=gene-PHA55_RS03695;Name=ytjA;gbkey=Gene;gene=ytjA;gene_biotype=protein_coding;locus_tag=PHA55_RS03695;old_locus_tag=PHA55_03695
NZ_CP116044.1	Protein Homology	CDS	756419	756580	.	+	0	ID=cds-WP_000490275.1;Parent=gene-PHA55_RS03695;Dbxref=Genbank:WP_000490275.1;Name=WP_000490275.1;Ontology_term=GO:0005886;gbkey=CDS;gene=ytjA;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1;locus_tag=PHA55_RS03695;product=DUF1328 domain-containing protein;protein_id=WP_000490275.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	756702	757775	.	+	.	ID=gene-PHA55_RS03700;Name=yjjU;gbkey=Gene;gene=yjjU;gene_biotype=protein_coding;locus_tag=PHA55_RS03700;old_locus_tag=PHA55_03700
NZ_CP116044.1	Protein Homology	CDS	756702	757775	.	+	0	ID=cds-WP_001299799.1;Parent=gene-PHA55_RS03700;Dbxref=Genbank:WP_001299799.1;Name=WP_001299799.1;gbkey=CDS;gene=yjjU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418794.1;locus_tag=PHA55_RS03700;product=patatin family protein;protein_id=WP_001299799.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	757772	758554	.	+	.	ID=gene-PHA55_RS03705;Name=yjjV;gbkey=Gene;gene=yjjV;gene_biotype=protein_coding;locus_tag=PHA55_RS03705;old_locus_tag=PHA55_03705
NZ_CP116044.1	Protein Homology	CDS	757772	758554	.	+	0	ID=cds-WP_260589876.1;Parent=gene-PHA55_RS03705;Dbxref=Genbank:WP_260589876.1;Name=WP_260589876.1;Ontology_term=GO:0016788;gbkey=CDS;gene=yjjV;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313363.2;locus_tag=PHA55_RS03705;product=metal-dependent hydrolase;protein_id=WP_260589876.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	758667	759530	.	-	.	ID=gene-PHA55_RS03710;Name=yjjW;gbkey=Gene;gene=yjjW;gene_biotype=protein_coding;locus_tag=PHA55_RS03710;old_locus_tag=PHA55_03710
NZ_CP116044.1	Protein Homology	CDS	758667	759530	.	-	0	ID=cds-WP_001088400.1;Parent=gene-PHA55_RS03710;Dbxref=Genbank:WP_001088400.1;Name=WP_001088400.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;gene=yjjW;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418796.1;locus_tag=PHA55_RS03710;product=YjjW family glycine radical enzyme activase;protein_id=WP_001088400.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	759502	761052	.	-	.	ID=gene-PHA55_RS03715;Name=yjjI;gbkey=Gene;gene=yjjI;gene_biotype=protein_coding;locus_tag=PHA55_RS03715;old_locus_tag=PHA55_03715
NZ_CP116044.1	Protein Homology	CDS	759502	761052	.	-	0	ID=cds-WP_001143257.1;Parent=gene-PHA55_RS03715;Dbxref=Genbank:WP_001143257.1;Name=WP_001143257.1;Ontology_term=GO:0008150,GO:0003824,GO:0005575;gbkey=CDS;gene=yjjI;go_component=cellular_component|0005575||IEA;go_function=catalytic activity|0003824||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418797.1;locus_tag=PHA55_RS03715;product=YjjI family glycine radical enzyme;protein_id=WP_001143257.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	761310	762089	.	+	.	ID=gene-PHA55_RS03720;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=PHA55_RS03720;old_locus_tag=PHA55_03720
NZ_CP116044.1	Protein Homology	CDS	761310	762089	.	+	0	ID=cds-WP_001295412.1;Parent=gene-PHA55_RS03720;Dbxref=Genbank:WP_001295412.1;Name=WP_001295412.1;Ontology_term=GO:0009264,GO:0004139;gbkey=CDS;gene=deoC;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005097947.1;locus_tag=PHA55_RS03720;product=deoxyribose-phosphate aldolase;protein_id=WP_001295412.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	762216	763538	.	+	.	ID=gene-PHA55_RS03725;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=PHA55_RS03725;old_locus_tag=PHA55_03725
NZ_CP116044.1	Protein Homology	CDS	762216	763538	.	+	0	ID=cds-WP_000477811.1;Parent=gene-PHA55_RS03725;Dbxref=Genbank:WP_000477811.1;Name=WP_000477811.1;Ontology_term=GO:0006139,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313368.2;locus_tag=PHA55_RS03725;product=thymidine phosphorylase;protein_id=WP_000477811.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	763590	764813	.	+	.	ID=gene-PHA55_RS03730;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=PHA55_RS03730;old_locus_tag=PHA55_03730
NZ_CP116044.1	Protein Homology	CDS	763590	764813	.	+	0	ID=cds-WP_000816471.1;Parent=gene-PHA55_RS03730;Dbxref=Genbank:WP_000816471.1;Name=WP_000816471.1;Ontology_term=GO:0006139,GO:0008973;gbkey=CDS;gene=deoB;go_function=phosphopentomutase activity|0008973||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313369.1;locus_tag=PHA55_RS03730;product=phosphopentomutase;protein_id=WP_000816471.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	764893	765612	.	+	.	ID=gene-PHA55_RS03735;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=PHA55_RS03735;old_locus_tag=PHA55_03735
NZ_CP116044.1	Protein Homology	CDS	764893	765612	.	+	0	ID=cds-WP_000224877.1;Parent=gene-PHA55_RS03735;Dbxref=Genbank:WP_000224877.1;Name=WP_000224877.1;Ontology_term=GO:0043096,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=purine nucleobase salvage|0043096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313370.1;locus_tag=PHA55_RS03735;product=purine-nucleoside phosphorylase;protein_id=WP_000224877.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	765773	766036	.	-	.	ID=gene-PHA55_RS03740;Name=PHA55_RS03740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS03740;old_locus_tag=PHA55_03740;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	765773	766036	.	-	0	ID=cds-PHA55_RS03740;Parent=gene-PHA55_RS03740;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313371.1;locus_tag=PHA55_RS03740;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	766068	767084	.	-	.	ID=gene-PHA55_RS03745;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=PHA55_RS03745;old_locus_tag=PHA55_03745
NZ_CP116044.1	Protein Homology	CDS	766068	767084	.	-	0	ID=cds-WP_000105865.1;Parent=gene-PHA55_RS03745;Dbxref=Genbank:WP_000105865.1;Name=WP_000105865.1;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418803.1;locus_tag=PHA55_RS03745;product=lipoate--protein ligase LplA;protein_id=WP_000105865.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	767112	767756	.	-	.	ID=gene-PHA55_RS03750;Name=ytjB;gbkey=Gene;gene=ytjB;gene_biotype=protein_coding;locus_tag=PHA55_RS03750;old_locus_tag=PHA55_03750
NZ_CP116044.1	Protein Homology	CDS	767112	767756	.	-	0	ID=cds-WP_000124615.1;Parent=gene-PHA55_RS03750;Dbxref=Genbank:WP_000124615.1;Name=WP_000124615.1;gbkey=CDS;gene=ytjB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418804.1;locus_tag=PHA55_RS03750;product=YtjB family periplasmic protein;protein_id=WP_000124615.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	767862	768830	.	+	.	ID=gene-PHA55_RS03755;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=PHA55_RS03755;old_locus_tag=PHA55_03755
NZ_CP116044.1	Protein Homology	CDS	767862	768830	.	+	0	ID=cds-WP_001132955.1;Parent=gene-PHA55_RS03755;Dbxref=Genbank:WP_001132955.1;Name=WP_001132955.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313373.1;locus_tag=PHA55_RS03755;product=phosphoserine phosphatase;protein_id=WP_001132955.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	768879	770261	.	+	.	ID=gene-PHA55_RS03760;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=PHA55_RS03760;old_locus_tag=PHA55_03760
NZ_CP116044.1	Protein Homology	CDS	768879	770261	.	+	0	ID=cds-WP_001029698.1;Parent=gene-PHA55_RS03760;Dbxref=Genbank:WP_001029698.1;Name=WP_001029698.1;Ontology_term=GO:0006281,GO:0005524;gbkey=CDS;gene=radA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=PHA55_RS03760;product=DNA repair protein RadA;protein_id=WP_001029698.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	770282	771514	.	+	.	ID=gene-PHA55_RS03765;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=PHA55_RS03765;old_locus_tag=PHA55_03765
NZ_CP116044.1	Protein Homology	CDS	770282	771514	.	+	0	ID=cds-WP_260589877.1;Parent=gene-PHA55_RS03765;Dbxref=Genbank:WP_260589877.1;Name=WP_260589877.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418807.4;locus_tag=PHA55_RS03765;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_260589877.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	771821	773488	.	-	.	ID=gene-PHA55_RS03770;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=PHA55_RS03770;old_locus_tag=PHA55_03770
NZ_CP116044.1	Protein Homology	CDS	771821	773488	.	-	0	ID=cds-WP_000046749.1;Parent=gene-PHA55_RS03770;Dbxref=Genbank:WP_000046749.1;Name=WP_000046749.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=PHA55_RS03770;product=energy-dependent translational throttle protein EttA;protein_id=WP_000046749.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	773699	775636	.	+	.	ID=gene-PHA55_RS03775;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=PHA55_RS03775;old_locus_tag=PHA55_03775
NZ_CP116044.1	Protein Homology	CDS	773699	775636	.	+	0	ID=cds-WP_000409466.1;Parent=gene-PHA55_RS03775;Dbxref=Genbank:WP_000409466.1;Name=WP_000409466.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418809.4;locus_tag=PHA55_RS03775;product=murein transglycosylase;protein_id=WP_000409466.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	775726	776052	.	+	.	ID=gene-PHA55_RS03780;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=PHA55_RS03780;old_locus_tag=PHA55_03780
NZ_CP116044.1	Protein Homology	CDS	775726	776052	.	+	0	ID=cds-WP_000068679.1;Parent=gene-PHA55_RS03780;Dbxref=Genbank:WP_000068679.1;Name=WP_000068679.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418810.1;locus_tag=PHA55_RS03780;product=trp operon repressor;protein_id=WP_000068679.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	776166	777146	.	-	.	ID=gene-PHA55_RS03785;Name=PHA55_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS03785;old_locus_tag=PHA55_03785
NZ_CP116044.1	Protein Homology	CDS	776166	777146	.	-	0	ID=cds-WP_000399648.1-2;Parent=gene-PHA55_RS03785;Dbxref=Genbank:WP_000399648.1;Name=WP_000399648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904434.1;locus_tag=PHA55_RS03785;product=IS110-like element IS621 family transposase;protein_id=WP_000399648.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	777416	777937	.	-	.	ID=gene-PHA55_RS03790;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=PHA55_RS03790;old_locus_tag=PHA55_03790
NZ_CP116044.1	Protein Homology	CDS	777416	777937	.	-	0	ID=cds-WP_001297279.1;Parent=gene-PHA55_RS03790;Dbxref=Genbank:WP_001297279.1;Name=WP_001297279.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001649724.1;locus_tag=PHA55_RS03790;product=inosine/xanthosine triphosphatase;protein_id=WP_001297279.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	777989	778636	.	+	.	ID=gene-PHA55_RS03795;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=PHA55_RS03795;old_locus_tag=PHA55_03795
NZ_CP116044.1	Protein Homology	CDS	777989	778636	.	+	0	ID=cds-WP_000942344.1;Parent=gene-PHA55_RS03795;Dbxref=Genbank:WP_000942344.1;Name=WP_000942344.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313380.1;locus_tag=PHA55_RS03795;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WP_000942344.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	778633	779502	.	-	.	ID=gene-PHA55_RS03800;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=PHA55_RS03800;old_locus_tag=PHA55_03800
NZ_CP116044.1	Protein Homology	CDS	778633	779502	.	-	0	ID=cds-WP_000371666.1;Parent=gene-PHA55_RS03800;Dbxref=Genbank:WP_000371666.1;Name=WP_000371666.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313381.1;locus_tag=PHA55_RS03800;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WP_000371666.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	779713	780186	.	+	.	ID=gene-PHA55_RS03805;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=PHA55_RS03805;old_locus_tag=PHA55_03805
NZ_CP116044.1	Protein Homology	CDS	779713	780186	.	+	0	ID=cds-WP_000875487.1;Parent=gene-PHA55_RS03805;Dbxref=Genbank:WP_000875487.1;Name=WP_000875487.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313382.1;locus_tag=PHA55_RS03805;product=protein CreA;protein_id=WP_000875487.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	780199	780888	.	+	.	ID=gene-PHA55_RS03810;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=PHA55_RS03810;old_locus_tag=PHA55_03810
NZ_CP116044.1	Protein Homology	CDS	780199	780888	.	+	0	ID=cds-WP_001188656.1;Parent=gene-PHA55_RS03810;Dbxref=Genbank:WP_001188656.1;Name=WP_001188656.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=creB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710136.1;locus_tag=PHA55_RS03810;product=two-component system response regulator CreB;protein_id=WP_001188656.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	780888	782312	.	+	.	ID=gene-PHA55_RS03815;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=PHA55_RS03815;old_locus_tag=PHA55_03815
NZ_CP116044.1	Protein Homology	CDS	780888	782312	.	+	0	ID=cds-WP_001219604.1;Parent=gene-PHA55_RS03815;Dbxref=Genbank:WP_001219604.1;Name=WP_001219604.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=creC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418816.1;locus_tag=PHA55_RS03815;product=two-component system sensor histidine kinase CreC;protein_id=WP_001219604.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	782370	783722	.	+	.	ID=gene-PHA55_RS03820;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=PHA55_RS03820;old_locus_tag=PHA55_03820
NZ_CP116044.1	Protein Homology	CDS	782370	783722	.	+	0	ID=cds-WP_000920306.1;Parent=gene-PHA55_RS03820;Dbxref=Genbank:WP_000920306.1;Name=WP_000920306.1;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313385.1;locus_tag=PHA55_RS03820;product=cell envelope integrity protein CreD;protein_id=WP_000920306.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	783782	784498	.	-	.	ID=gene-PHA55_RS03825;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=PHA55_RS03825;old_locus_tag=PHA55_03825
NZ_CP116044.1	Protein Homology	CDS	783782	784498	.	-	0	ID=cds-WP_001194358.1;Parent=gene-PHA55_RS03825;Dbxref=Genbank:WP_001194358.1;Name=WP_001194358.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=PHA55_RS03825;product=two-component system response regulator ArcA;protein_id=WP_001194358.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	784594	784734	.	+	.	ID=gene-PHA55_RS03830;Name=yjjY;gbkey=Gene;gene=yjjY;gene_biotype=protein_coding;locus_tag=PHA55_RS03830;old_locus_tag=PHA55_03830
NZ_CP116044.1	Protein Homology	CDS	784594	784734	.	+	0	ID=cds-WP_001303782.1;Parent=gene-PHA55_RS03830;Dbxref=Genbank:WP_001303782.1;Name=WP_001303782.1;gbkey=CDS;gene=yjjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418819.1;locus_tag=PHA55_RS03830;product=protein YjjY;protein_id=WP_001303782.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	785134	785820	.	+	.	ID=gene-PHA55_RS03835;Name=yjtD;gbkey=Gene;gene=yjtD;gene_biotype=protein_coding;locus_tag=PHA55_RS03835;old_locus_tag=PHA55_03835
NZ_CP116044.1	Protein Homology	CDS	785134	785820	.	+	0	ID=cds-WP_001223177.1;Parent=gene-PHA55_RS03835;Dbxref=Genbank:WP_001223177.1;Name=WP_001223177.1;gbkey=CDS;gene=yjtD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710140.2;locus_tag=PHA55_RS03835;product=tRNA/rRNA methyltransferase;protein_id=WP_001223177.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	786034	786099	.	+	.	ID=gene-PHA55_RS03840;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=PHA55_RS03840;old_locus_tag=PHA55_03840
NZ_CP116044.1	Protein Homology	CDS	786034	786099	.	+	0	ID=cds-WP_001386572.1;Parent=gene-PHA55_RS03840;Dbxref=Genbank:WP_001386572.1;Name=WP_001386572.1;gbkey=CDS;gene=thrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414542.1;locus_tag=PHA55_RS03840;product=thr operon leader peptide;protein_id=WP_001386572.1;transl_table=11
NZ_CP116044.1	cmsearch	sequence_feature	786035	786154	.	+	.	ID=id-NZ_CP116044.1:786035..786154;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1
NZ_CP116044.1	RefSeq	gene	786180	788642	.	+	.	ID=gene-PHA55_RS03845;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=PHA55_RS03845;old_locus_tag=PHA55_03845
NZ_CP116044.1	Protein Homology	CDS	786180	788642	.	+	0	ID=cds-WP_001264698.1;Parent=gene-PHA55_RS03845;Dbxref=Genbank:WP_001264698.1;Name=WP_001264698.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=PHA55_RS03845;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_001264698.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	788644	789576	.	+	.	ID=gene-PHA55_RS03850;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=PHA55_RS03850;old_locus_tag=PHA55_03850
NZ_CP116044.1	Protein Homology	CDS	788644	789576	.	+	0	ID=cds-WP_000241649.1;Parent=gene-PHA55_RS03850;Dbxref=Genbank:WP_000241649.1;Name=WP_000241649.1;Ontology_term=GO:0009088,GO:0004413;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308030.1;locus_tag=PHA55_RS03850;product=homoserine kinase;protein_id=WP_000241649.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	789577	790863	.	+	.	ID=gene-PHA55_RS03855;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=PHA55_RS03855;old_locus_tag=PHA55_03855
NZ_CP116044.1	Protein Homology	CDS	789577	790863	.	+	0	ID=cds-WP_000781063.1;Parent=gene-PHA55_RS03855;Dbxref=Genbank:WP_000781063.1;Name=WP_000781063.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308031.1;locus_tag=PHA55_RS03855;product=threonine synthase;protein_id=WP_000781063.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	791077	791373	.	+	.	ID=gene-PHA55_RS03860;Name=yaaX;gbkey=Gene;gene=yaaX;gene_biotype=protein_coding;locus_tag=PHA55_RS03860;old_locus_tag=PHA55_03860
NZ_CP116044.1	Protein Homology	CDS	791077	791373	.	+	0	ID=cds-WP_000738723.1;Parent=gene-PHA55_RS03860;Dbxref=Genbank:WP_000738723.1;Name=WP_000738723.1;gbkey=CDS;gene=yaaX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414546.1;locus_tag=PHA55_RS03860;product=DUF2502 domain-containing protein;protein_id=WP_000738723.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	791526	792302	.	-	.	ID=gene-PHA55_RS03865;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=PHA55_RS03865;old_locus_tag=PHA55_03865
NZ_CP116044.1	Protein Homology	CDS	791526	792302	.	-	0	ID=cds-WP_000906205.1;Parent=gene-PHA55_RS03865;Dbxref=Genbank:WP_000906205.1;Name=WP_000906205.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308033.1;locus_tag=PHA55_RS03865;product=peroxide stress protein YaaA;protein_id=WP_000906205.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	792372	793802	.	-	.	ID=gene-PHA55_RS03870;Name=yaaJ;gbkey=Gene;gene=yaaJ;gene_biotype=protein_coding;locus_tag=PHA55_RS03870;old_locus_tag=PHA55_03870
NZ_CP116044.1	Protein Homology	CDS	792372	793802	.	-	0	ID=cds-WP_001112601.1;Parent=gene-PHA55_RS03870;Dbxref=Genbank:WP_001112601.1;Name=WP_001112601.1;gbkey=CDS;gene=yaaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308034.1;locus_tag=PHA55_RS03870;product=sodium:alanine symporter family protein;protein_id=WP_001112601.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	794081	795034	.	+	.	ID=gene-PHA55_RS03875;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=PHA55_RS03875;old_locus_tag=PHA55_03875
NZ_CP116044.1	Protein Homology	CDS	794081	795034	.	+	0	ID=cds-WP_000130189.1;Parent=gene-PHA55_RS03875;Dbxref=Genbank:WP_000130189.1;Name=WP_000130189.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;gene=tal;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308035.1;locus_tag=PHA55_RS03875;product=transaldolase;protein_id=WP_000130189.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	795149	795736	.	+	.	ID=gene-PHA55_RS03880;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=PHA55_RS03880;old_locus_tag=PHA55_03880
NZ_CP116044.1	Protein Homology	CDS	795149	795736	.	+	0	ID=cds-WP_001094682.1;Parent=gene-PHA55_RS03880;Dbxref=Genbank:WP_001094682.1;Name=WP_001094682.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308036.1;locus_tag=PHA55_RS03880;product=molybdopterin adenylyltransferase;protein_id=WP_001094682.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	795771	796337	.	-	.	ID=gene-PHA55_RS03885;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=PHA55_RS03885;old_locus_tag=PHA55_03885
NZ_CP116044.1	Protein Homology	CDS	795771	796337	.	-	0	ID=cds-WP_000528538.1;Parent=gene-PHA55_RS03885;Dbxref=Genbank:WP_000528538.1;Name=WP_000528538.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308037.1;locus_tag=PHA55_RS03885;product=acetate uptake transporter;protein_id=WP_000528538.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	796486	797199	.	-	.	ID=gene-PHA55_RS03890;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=PHA55_RS03890;old_locus_tag=PHA55_03890
NZ_CP116044.1	Protein Homology	CDS	796486	797199	.	-	0	ID=cds-WP_001102379.1;Parent=gene-PHA55_RS03890;Dbxref=Genbank:WP_001102379.1;Name=WP_001102379.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414552.1;locus_tag=PHA55_RS03890;product=acidic protein MsyB;protein_id=WP_001102379.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	797225	797629	.	-	.	ID=gene-PHA55_RS03895;Name=yaaI;gbkey=Gene;gene=yaaI;gene_biotype=protein_coding;locus_tag=PHA55_RS03895;old_locus_tag=PHA55_03895
NZ_CP116044.1	Protein Homology	CDS	797225	797629	.	-	0	ID=cds-WP_000843559.1;Parent=gene-PHA55_RS03895;Dbxref=Genbank:WP_000843559.1;Name=WP_000843559.1;gbkey=CDS;gene=yaaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_705972.1;locus_tag=PHA55_RS03895;product=DUF2541 family protein;protein_id=WP_000843559.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	798006	799922	.	+	.	ID=gene-PHA55_RS03900;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=PHA55_RS03900;old_locus_tag=PHA55_03900
NZ_CP116044.1	Protein Homology	CDS	798006	799922	.	+	0	ID=cds-WP_000516135.1;Parent=gene-PHA55_RS03900;Dbxref=Genbank:WP_000516135.1;Name=WP_000516135.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=PHA55_RS03900;product=molecular chaperone DnaK;protein_id=WP_000516135.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	800011	801141	.	+	.	ID=gene-PHA55_RS03905;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=PHA55_RS03905;old_locus_tag=PHA55_03905
NZ_CP116044.1	Protein Homology	CDS	800011	801141	.	+	0	ID=cds-WP_001118464.1;Parent=gene-PHA55_RS03905;Dbxref=Genbank:WP_001118464.1;Name=WP_001118464.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308042.1;locus_tag=PHA55_RS03905;product=molecular chaperone DnaJ;protein_id=WP_001118464.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	801245	801397	.	-	.	ID=gene-PHA55_RS03910;Name=mokC;gbkey=Gene;gene=mokC;gene_biotype=protein_coding;locus_tag=PHA55_RS03910;old_locus_tag=PHA55_03910
NZ_CP116044.1	Protein Homology	CDS	801245	801397	.	-	0	ID=cds-WP_000809168.1;Parent=gene-PHA55_RS03910;Dbxref=Genbank:WP_000809168.1;Name=WP_000809168.1;gbkey=CDS;gene=mokC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025292.1;locus_tag=PHA55_RS03910;product=type I toxin-antitoxin system toxin MokC;protein_id=WP_000809168.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	801983	803149	.	+	.	ID=gene-PHA55_RS03915;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=PHA55_RS03915;old_locus_tag=PHA55_03915
NZ_CP116044.1	Protein Homology	CDS	801983	803149	.	+	0	ID=cds-WP_000681360.1;Parent=gene-PHA55_RS03915;Dbxref=Genbank:WP_000681360.1;Name=WP_000681360.1;Ontology_term=GO:0006814,GO:1902600,GO:0015385;gbkey=CDS;gene=nhaA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308044.1;locus_tag=PHA55_RS03915;product=Na+/H+ antiporter NhaA;protein_id=WP_000681360.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	803215	804114	.	+	.	ID=gene-PHA55_RS03920;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=PHA55_RS03920;old_locus_tag=PHA55_03920
NZ_CP116044.1	Protein Homology	CDS	803215	804114	.	+	0	ID=cds-WP_001300855.1;Parent=gene-PHA55_RS03920;Dbxref=Genbank:WP_001300855.1;Name=WP_001300855.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_705976.2;locus_tag=PHA55_RS03920;product=transcriptional activator NhaR;protein_id=WP_001300855.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	804153	805111	.	-	.	ID=gene-PHA55_RS03925;Name=PHA55_RS03925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS03925;old_locus_tag=PHA55_03925;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	804153	805111	.	-	0	ID=cds-PHA55_RS03925;Parent=gene-PHA55_RS03925;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000871680.1;locus_tag=PHA55_RS03925;product=fimbrial family protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	805124	806455	.	-	.	ID=gene-PHA55_RS03930;Name=PHA55_RS03930;end_range=806455,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS03930;old_locus_tag=PHA55_03930;partial=true;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	805124	806455	.	-	0	ID=cds-PHA55_RS03930;Parent=gene-PHA55_RS03930;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009297,GO:0015473,GO:0016020;end_range=806455,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308049.1;locus_tag=PHA55_RS03930;partial=true;product=fimbria/pilus outer membrane usher protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	806702	808123	.	-	.	ID=gene-PHA55_RS03935;Name=espX1;gbkey=Gene;gene=espX1;gene_biotype=protein_coding;locus_tag=PHA55_RS03935;old_locus_tag=PHA55_03935
NZ_CP116044.1	Protein Homology	CDS	806702	808123	.	-	0	ID=cds-WP_000181238.1;Parent=gene-PHA55_RS03935;Dbxref=Genbank:WP_000181238.1;Name=WP_000181238.1;gbkey=CDS;gene=espX1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308052.1;locus_tag=PHA55_RS03935;product=type III secretion system effector EspX1;protein_id=WP_000181238.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	808607	808870	.	-	.	ID=gene-PHA55_RS03940;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=PHA55_RS03940;old_locus_tag=PHA55_03940
NZ_CP116044.1	Protein Homology	CDS	808607	808870	.	-	0	ID=cds-WP_001274021.1;Parent=gene-PHA55_RS03940;Dbxref=Genbank:WP_001274021.1;Name=WP_001274021.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsT;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=PHA55_RS03940;product=30S ribosomal protein S20;protein_id=WP_001274021.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	808973	809191	.	+	.	ID=gene-PHA55_RS03945;Name=yaaY;gbkey=Gene;gene=yaaY;gene_biotype=protein_coding;locus_tag=PHA55_RS03945;old_locus_tag=PHA55_03945
NZ_CP116044.1	Protein Homology	CDS	808973	809191	.	+	0	ID=cds-WP_001295417.1;Parent=gene-PHA55_RS03945;Dbxref=Genbank:WP_001295417.1;Name=WP_001295417.1;gbkey=CDS;gene=yaaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414565.1;locus_tag=PHA55_RS03945;product=DUF2575 family protein;protein_id=WP_001295417.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	809199	810140	.	+	.	ID=gene-PHA55_RS03950;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=PHA55_RS03950;old_locus_tag=PHA55_03950
NZ_CP116044.1	Protein Homology	CDS	809199	810140	.	+	0	ID=cds-WP_000767329.1;Parent=gene-PHA55_RS03950;Dbxref=Genbank:WP_000767329.1;Name=WP_000767329.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308055.1;locus_tag=PHA55_RS03950;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_000767329.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	810183	812999	.	+	.	ID=gene-PHA55_RS03955;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=PHA55_RS03955;old_locus_tag=PHA55_03955
NZ_CP116044.1	Protein Homology	CDS	810183	812999	.	+	0	ID=cds-WP_001286857.1;Parent=gene-PHA55_RS03955;Dbxref=Genbank:WP_001286857.1;Name=WP_001286857.1;Ontology_term=GO:0006428,GO:0004822,GO:0005737;gbkey=CDS;gene=ileS;go_component=cytoplasm|0005737||IEA;go_function=isoleucine-tRNA ligase activity|0004822||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124083.1;locus_tag=PHA55_RS03955;product=isoleucine--tRNA ligase;protein_id=WP_001286857.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	812999	813493	.	+	.	ID=gene-PHA55_RS03960;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=PHA55_RS03960;old_locus_tag=PHA55_03960
NZ_CP116044.1	Protein Homology	CDS	812999	813493	.	+	0	ID=cds-WP_000083369.1;Parent=gene-PHA55_RS03960;Dbxref=Genbank:WP_000083369.1;Name=WP_000083369.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414568.1;locus_tag=PHA55_RS03960;product=signal peptidase II;protein_id=WP_000083369.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	813581	814030	.	+	.	ID=gene-PHA55_RS03965;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=PHA55_RS03965;old_locus_tag=PHA55_03965
NZ_CP116044.1	Protein Homology	CDS	813581	814030	.	+	0	ID=cds-WP_000004655.1;Parent=gene-PHA55_RS03965;Dbxref=Genbank:WP_000004655.1;Name=WP_000004655.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308058.1;locus_tag=PHA55_RS03965;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000004655.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	814032	814982	.	+	.	ID=gene-PHA55_RS03970;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=PHA55_RS03970;old_locus_tag=PHA55_03970
NZ_CP116044.1	Protein Homology	CDS	814032	814982	.	+	0	ID=cds-WP_001166395.1;Parent=gene-PHA55_RS03970;Dbxref=Genbank:WP_001166395.1;Name=WP_001166395.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=PHA55_RS03970;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_001166395.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	815048	815962	.	+	.	ID=gene-PHA55_RS03975;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=PHA55_RS03975;old_locus_tag=PHA55_03975
NZ_CP116044.1	Protein Homology	CDS	815048	815962	.	+	0	ID=cds-WP_001239142.1;Parent=gene-PHA55_RS03975;Dbxref=Genbank:WP_001239142.1;Name=WP_001239142.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414571.1;locus_tag=PHA55_RS03975;product=ribonucleoside hydrolase RihC;protein_id=WP_001239142.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	816129	816950	.	+	.	ID=gene-PHA55_RS03980;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=PHA55_RS03980;old_locus_tag=PHA55_03980
NZ_CP116044.1	Protein Homology	CDS	816129	816950	.	+	0	ID=cds-WP_000543605.1;Parent=gene-PHA55_RS03980;Dbxref=Genbank:WP_000543605.1;Name=WP_000543605.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414572.1;locus_tag=PHA55_RS03980;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_000543605.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	817406	818554	.	+	.	ID=gene-PHA55_RS03985;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=PHA55_RS03985;old_locus_tag=PHA55_03985
NZ_CP116044.1	Protein Homology	CDS	817406	818554	.	+	0	ID=cds-WP_000597260.1;Parent=gene-PHA55_RS03985;Dbxref=Genbank:WP_000597260.1;Name=WP_000597260.1;Ontology_term=GO:0009220,GO:0004088,GO:0005951;gbkey=CDS;gene=carA;go_component=carbamoyl-phosphate synthase complex|0005951||IEA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308062.1;locus_tag=PHA55_RS03985;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_000597260.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	818572	821793	.	+	.	ID=gene-PHA55_RS03990;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=PHA55_RS03990;old_locus_tag=PHA55_03990
NZ_CP116044.1	Protein Homology	CDS	818572	821793	.	+	0	ID=cds-WP_001126376.1;Parent=gene-PHA55_RS03990;Dbxref=Genbank:WP_001126376.1;Name=WP_001126376.1;Ontology_term=GO:0006807,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308063.1;locus_tag=PHA55_RS03990;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_001126376.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	822054	822449	.	+	.	ID=gene-PHA55_RS03995;Name=caiF;gbkey=Gene;gene=caiF;gene_biotype=protein_coding;locus_tag=PHA55_RS03995;old_locus_tag=PHA55_03995
NZ_CP116044.1	Protein Homology	CDS	822054	822449	.	+	0	ID=cds-WP_000333120.1;Parent=gene-PHA55_RS03995;Dbxref=Genbank:WP_000333120.1;Name=WP_000333120.1;gbkey=CDS;gene=caiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414576.4;locus_tag=PHA55_RS03995;product=carnitine metabolism transcriptional regulator CaiF;protein_id=WP_000333120.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	822535	823125	.	-	.	ID=gene-PHA55_RS04000;Name=caiE;gbkey=Gene;gene=caiE;gene_biotype=protein_coding;locus_tag=PHA55_RS04000;old_locus_tag=PHA55_04000
NZ_CP116044.1	Protein Homology	CDS	822535	823125	.	-	0	ID=cds-WP_000122876.1;Parent=gene-PHA55_RS04000;Dbxref=Genbank:WP_000122876.1;Name=WP_000122876.1;gbkey=CDS;gene=caiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308065.2;locus_tag=PHA55_RS04000;product=carnitine operon protein CaiE;protein_id=WP_000122876.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	823131	823916	.	-	.	ID=gene-PHA55_RS04005;Name=caiD;gbkey=Gene;gene=caiD;gene_biotype=protein_coding;locus_tag=PHA55_RS04005;old_locus_tag=PHA55_04005
NZ_CP116044.1	Protein Homology	CDS	823131	823916	.	-	0	ID=cds-WP_000004397.1;Parent=gene-PHA55_RS04005;Dbxref=Genbank:WP_000004397.1;Name=WP_000004397.1;Ontology_term=GO:0016836;gbkey=CDS;gene=caiD;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414578.2;locus_tag=PHA55_RS04005;product=crotonobetainyl-CoA hydratase;protein_id=WP_000004397.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	824025	825578	.	-	.	ID=gene-PHA55_RS04010;Name=caiC;gbkey=Gene;gene=caiC;gene_biotype=protein_coding;locus_tag=PHA55_RS04010;old_locus_tag=PHA55_04010
NZ_CP116044.1	Protein Homology	CDS	824025	825578	.	-	0	ID=cds-WP_001297614.1;Parent=gene-PHA55_RS04010;Dbxref=Genbank:WP_001297614.1;Name=WP_001297614.1;Ontology_term=GO:0009437,GO:0016405;gbkey=CDS;gene=caiC;go_function=CoA-ligase activity|0016405||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308067.2;locus_tag=PHA55_RS04010;product=crotonobetaine/carnitine-CoA ligase;protein_id=WP_001297614.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	825652	826869	.	-	.	ID=gene-PHA55_RS04015;Name=caiB;gbkey=Gene;gene=caiB;gene_biotype=protein_coding;locus_tag=PHA55_RS04015;old_locus_tag=PHA55_04015
NZ_CP116044.1	Protein Homology	CDS	825652	826869	.	-	0	ID=cds-WP_000349932.1;Parent=gene-PHA55_RS04015;Dbxref=Genbank:WP_000349932.1;Name=WP_000349932.1;Ontology_term=GO:0009437,GO:0016782;gbkey=CDS;gene=caiB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_705994.1;locus_tag=PHA55_RS04015;product=L-carnitine CoA-transferase;protein_id=WP_000349932.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	826998	828140	.	-	.	ID=gene-PHA55_RS04020;Name=caiA;gbkey=Gene;gene=caiA;gene_biotype=protein_coding;locus_tag=PHA55_RS04020;old_locus_tag=PHA55_04020
NZ_CP116044.1	Protein Homology	CDS	826998	828140	.	-	0	ID=cds-WP_000347117.1;Parent=gene-PHA55_RS04020;Dbxref=Genbank:WP_000347117.1;Name=WP_000347117.1;Ontology_term=GO:0009437,GO:0003995,GO:0016627;gbkey=CDS;gene=caiA;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124373.1;locus_tag=PHA55_RS04020;product=crotonobetainyl-CoA dehydrogenase;protein_id=WP_000347117.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	828171	829685	.	-	.	ID=gene-PHA55_RS04025;Name=caiT;gbkey=Gene;gene=caiT;gene_biotype=protein_coding;locus_tag=PHA55_RS04025;old_locus_tag=PHA55_04025
NZ_CP116044.1	Protein Homology	CDS	828171	829685	.	-	0	ID=cds-WP_000787103.1;Parent=gene-PHA55_RS04025;Dbxref=Genbank:WP_000787103.1;Name=WP_000787103.1;gbkey=CDS;gene=caiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414582.1;locus_tag=PHA55_RS04025;product=L-carnitine/gamma-butyrobetaine antiporter;protein_id=WP_000787103.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	830159	830929	.	+	.	ID=gene-PHA55_RS04030;Name=fixA;gbkey=Gene;gene=fixA;gene_biotype=protein_coding;locus_tag=PHA55_RS04030;old_locus_tag=PHA55_04030
NZ_CP116044.1	Protein Homology	CDS	830159	830929	.	+	0	ID=cds-WP_000692204.1;Parent=gene-PHA55_RS04030;Dbxref=Genbank:WP_000692204.1;Name=WP_000692204.1;gbkey=CDS;gene=fixA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414583.2;locus_tag=PHA55_RS04030;product=electron transfer flavoprotein FixA;protein_id=WP_000692204.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	830944	831885	.	+	.	ID=gene-PHA55_RS04035;Name=fixB;gbkey=Gene;gene=fixB;gene_biotype=protein_coding;locus_tag=PHA55_RS04035;old_locus_tag=PHA55_04035
NZ_CP116044.1	Protein Homology	CDS	830944	831885	.	+	0	ID=cds-WP_271287498.1;Parent=gene-PHA55_RS04035;Dbxref=Genbank:WP_271287498.1;Name=WP_271287498.1;gbkey=CDS;gene=fixB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414584.1;locus_tag=PHA55_RS04035;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_271287498.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	831936	833222	.	+	.	ID=gene-PHA55_RS04040;Name=fixC;gbkey=Gene;gene=fixC;gene_biotype=protein_coding;locus_tag=PHA55_RS04040;old_locus_tag=PHA55_04040
NZ_CP116044.1	Protein Homology	CDS	831936	833222	.	+	0	ID=cds-WP_001287715.1;Parent=gene-PHA55_RS04040;Dbxref=Genbank:WP_001287715.1;Name=WP_001287715.1;gbkey=CDS;gene=fixC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414585.1;locus_tag=PHA55_RS04040;product=FAD-dependent oxidoreductase;protein_id=WP_001287715.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	833219	833506	.	+	.	ID=gene-PHA55_RS04045;Name=fixX;gbkey=Gene;gene=fixX;gene_biotype=protein_coding;locus_tag=PHA55_RS04045;old_locus_tag=PHA55_04045
NZ_CP116044.1	Protein Homology	CDS	833219	833506	.	+	0	ID=cds-WP_000203741.1;Parent=gene-PHA55_RS04045;Dbxref=Genbank:WP_000203741.1;Name=WP_000203741.1;gbkey=CDS;gene=fixX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308074.1;locus_tag=PHA55_RS04045;product=ferredoxin-like protein FixX;protein_id=WP_000203741.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	833565	834896	.	+	.	ID=gene-PHA55_RS04050;Name=yaaU;gbkey=Gene;gene=yaaU;gene_biotype=protein_coding;locus_tag=PHA55_RS04050;old_locus_tag=PHA55_04050
NZ_CP116044.1	Protein Homology	CDS	833565	834896	.	+	0	ID=cds-WP_001183198.1;Parent=gene-PHA55_RS04050;Dbxref=Genbank:WP_001183198.1;Name=WP_001183198.1;gbkey=CDS;gene=yaaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414587.1;locus_tag=PHA55_RS04050;product=MFS transporter;protein_id=WP_001183198.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	835004	835534	.	+	.	ID=gene-PHA55_RS04055;Name=kefF;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;locus_tag=PHA55_RS04055;old_locus_tag=PHA55_04055
NZ_CP116044.1	Protein Homology	CDS	835004	835534	.	+	0	ID=cds-WP_000600725.1;Parent=gene-PHA55_RS04055;Dbxref=Genbank:WP_000600725.1;Name=WP_000600725.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefF;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414588.1;locus_tag=PHA55_RS04055;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=WP_000600725.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	835527	837389	.	+	.	ID=gene-PHA55_RS04060;Name=kefC;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;locus_tag=PHA55_RS04060;old_locus_tag=PHA55_04060
NZ_CP116044.1	Protein Homology	CDS	835527	837389	.	+	0	ID=cds-WP_000377194.1;Parent=gene-PHA55_RS04060;Dbxref=Genbank:WP_000377194.1;Name=WP_000377194.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefC;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414589.1;locus_tag=PHA55_RS04060;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=WP_000377194.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	837581	838060	.	+	.	ID=gene-PHA55_RS04065;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=PHA55_RS04065;old_locus_tag=PHA55_04065
NZ_CP116044.1	Protein Homology	CDS	837581	838060	.	+	0	ID=cds-WP_000624375.1;Parent=gene-PHA55_RS04065;Dbxref=Genbank:WP_000624375.1;Name=WP_000624375.1;Ontology_term=GO:0046654,GO:0004146;gbkey=CDS;gene=folA;go_function=dihydrofolate reductase activity|0004146||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456510.1;locus_tag=PHA55_RS04065;product=type 3 dihydrofolate reductase;protein_id=WP_000624375.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	838138	838980	.	-	.	ID=gene-PHA55_RS04070;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=PHA55_RS04070;old_locus_tag=PHA55_04070
NZ_CP116044.1	Protein Homology	CDS	838138	838980	.	-	0	ID=cds-WP_000257186.1;Parent=gene-PHA55_RS04070;Dbxref=Genbank:WP_000257186.1;Name=WP_000257186.1;Ontology_term=GO:0006139,GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706005.1;locus_tag=PHA55_RS04070;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WP_000257186.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	838987	839364	.	-	.	ID=gene-PHA55_RS04075;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=PHA55_RS04075;old_locus_tag=PHA55_04075
NZ_CP116044.1	Protein Homology	CDS	838987	839364	.	-	0	ID=cds-WP_000610901.1;Parent=gene-PHA55_RS04075;Dbxref=Genbank:WP_000610901.1;Name=WP_000610901.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308082.1;locus_tag=PHA55_RS04075;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_000610901.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	839367	840188	.	-	.	ID=gene-PHA55_RS04080;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=PHA55_RS04080;old_locus_tag=PHA55_04080
NZ_CP116044.1	Protein Homology	CDS	839367	840188	.	-	0	ID=cds-WP_001065373.1;Parent=gene-PHA55_RS04080;Dbxref=Genbank:WP_001065373.1;Name=WP_001065373.1;Ontology_term=GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414593.1;locus_tag=PHA55_RS04080;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_001065373.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	840185	841174	.	-	.	ID=gene-PHA55_RS04085;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=PHA55_RS04085;old_locus_tag=PHA55_04085
NZ_CP116044.1	Protein Homology	CDS	840185	841174	.	-	0	ID=cds-WP_000241260.1;Parent=gene-PHA55_RS04085;Dbxref=Genbank:WP_000241260.1;Name=WP_000241260.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308084.1;locus_tag=PHA55_RS04085;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_000241260.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	841174	842460	.	-	.	ID=gene-PHA55_RS04090;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=PHA55_RS04090;old_locus_tag=PHA55_04090
NZ_CP116044.1	Protein Homology	CDS	841174	842460	.	-	0	ID=cds-WP_000800457.1;Parent=gene-PHA55_RS04090;Dbxref=Genbank:WP_000800457.1;Name=WP_000800457.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0060274,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA,maintenance of stationary phase|0060274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308085.1;locus_tag=PHA55_RS04090;product=peptidylprolyl isomerase SurA;protein_id=WP_000800457.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	842513	844867	.	-	.	ID=gene-PHA55_RS04095;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=PHA55_RS04095;old_locus_tag=PHA55_04095
NZ_CP116044.1	Protein Homology	CDS	842513	844867	.	-	0	ID=cds-WP_000746151.1;Parent=gene-PHA55_RS04095;Dbxref=Genbank:WP_000746151.1;Name=WP_000746151.1;Ontology_term=GO:0010033,GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=response to organic substance|0010033||IEA,lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414596.1;locus_tag=PHA55_RS04095;product=LPS assembly protein LptD;protein_id=WP_000746151.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	845122	845937	.	+	.	ID=gene-PHA55_RS04100;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=PHA55_RS04100;old_locus_tag=PHA55_04100
NZ_CP116044.1	Protein Homology	CDS	845122	845937	.	+	0	ID=cds-WP_260589734.1;Parent=gene-PHA55_RS04100;Dbxref=Genbank:WP_260589734.1;Name=WP_260589734.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308087.1;locus_tag=PHA55_RS04100;product=co-chaperone DjlA;protein_id=WP_260589734.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	846057	847037	.	-	.	ID=gene-PHA55_RS04105;Name=PHA55_RS04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS04105;old_locus_tag=PHA55_04105
NZ_CP116044.1	Protein Homology	CDS	846057	847037	.	-	0	ID=cds-WP_000399648.1-3;Parent=gene-PHA55_RS04105;Dbxref=Genbank:WP_000399648.1;Name=WP_000399648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904434.1;locus_tag=PHA55_RS04105;product=IS110-like element IS621 family transposase;protein_id=WP_000399648.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	847333	847992	.	-	.	ID=gene-PHA55_RS04110;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=PHA55_RS04110;old_locus_tag=PHA55_04110
NZ_CP116044.1	Protein Homology	CDS	847333	847992	.	-	0	ID=cds-WP_000525164.1;Parent=gene-PHA55_RS04110;Dbxref=Genbank:WP_000525164.1;Name=WP_000525164.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414600.1;locus_tag=PHA55_RS04110;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_000525164.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	848004	850910	.	-	.	ID=gene-PHA55_RS04115;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=PHA55_RS04115;old_locus_tag=PHA55_04115
NZ_CP116044.1	Protein Homology	CDS	848004	850910	.	-	0	ID=cds-WP_001117010.1;Parent=gene-PHA55_RS04115;Dbxref=Genbank:WP_001117010.1;Name=WP_001117010.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=PHA55_RS04115;product=RNA polymerase-associated protein RapA;protein_id=WP_001117010.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	851075	853426	.	-	.	ID=gene-PHA55_RS04120;Name=polB;gbkey=Gene;gene=polB;gene_biotype=protein_coding;locus_tag=PHA55_RS04120;old_locus_tag=PHA55_04120
NZ_CP116044.1	Protein Homology	CDS	851075	853426	.	-	0	ID=cds-WP_000035654.1;Parent=gene-PHA55_RS04120;Dbxref=Genbank:WP_000035654.1;Name=WP_000035654.1;Ontology_term=GO:0003677,GO:0003887;gbkey=CDS;gene=polB;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414602.1;locus_tag=PHA55_RS04120;product=DNA polymerase II;protein_id=WP_000035654.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	853501	854196	.	-	.	ID=gene-PHA55_RS04125;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=PHA55_RS04125;old_locus_tag=PHA55_04125
NZ_CP116044.1	Protein Homology	CDS	853501	854196	.	-	0	ID=cds-WP_000888666.1;Parent=gene-PHA55_RS04125;Dbxref=Genbank:WP_000888666.1;Name=WP_000888666.1;Ontology_term=GO:0019568,GO:0008742;gbkey=CDS;gene=araD;go_function=L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414603.1;locus_tag=PHA55_RS04125;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000888666.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	854365	855867	.	-	.	ID=gene-PHA55_RS04130;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=PHA55_RS04130;old_locus_tag=PHA55_04130
NZ_CP116044.1	Protein Homology	CDS	854365	855867	.	-	0	ID=cds-WP_000151734.1;Parent=gene-PHA55_RS04130;Dbxref=Genbank:WP_000151734.1;Name=WP_000151734.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308093.1;locus_tag=PHA55_RS04130;product=L-arabinose isomerase;protein_id=WP_000151734.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	855878	857578	.	-	.	ID=gene-PHA55_RS04135;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=PHA55_RS04135;old_locus_tag=PHA55_04135
NZ_CP116044.1	Protein Homology	CDS	855878	857578	.	-	0	ID=cds-WP_000951778.1;Parent=gene-PHA55_RS04135;Dbxref=Genbank:WP_000951778.1;Name=WP_000951778.1;Ontology_term=GO:0019568,GO:0008741;gbkey=CDS;gene=araB;go_function=ribulokinase activity|0008741||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706016.1;locus_tag=PHA55_RS04135;product=ribulokinase;protein_id=WP_000951778.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	857917	858795	.	+	.	ID=gene-PHA55_RS04140;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=PHA55_RS04140;old_locus_tag=PHA55_04140
NZ_CP116044.1	Protein Homology	CDS	857917	858795	.	+	0	ID=cds-WP_001300811.1;Parent=gene-PHA55_RS04140;Dbxref=Genbank:WP_001300811.1;Name=WP_001300811.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308095.1;locus_tag=PHA55_RS04140;product=arabinose operon transcriptional regulator AraC;protein_id=WP_001300811.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	858881	859645	.	+	.	ID=gene-PHA55_RS04145;Name=yabI;gbkey=Gene;gene=yabI;gene_biotype=protein_coding;locus_tag=PHA55_RS04145;old_locus_tag=PHA55_04145
NZ_CP116044.1	Protein Homology	CDS	858881	859645	.	+	0	ID=cds-WP_001148402.1;Parent=gene-PHA55_RS04145;Dbxref=Genbank:WP_001148402.1;Name=WP_001148402.1;gbkey=CDS;gene=yabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001148402.1;locus_tag=PHA55_RS04145;product=DedA family protein;protein_id=WP_001148402.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	859759	860457	.	-	.	ID=gene-PHA55_RS04150;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=PHA55_RS04150;old_locus_tag=PHA55_04150
NZ_CP116044.1	Protein Homology	CDS	859759	860457	.	-	0	ID=cds-WP_000916291.1;Parent=gene-PHA55_RS04150;Dbxref=Genbank:WP_000916291.1;Name=WP_000916291.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308097.1;locus_tag=PHA55_RS04150;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WP_000916291.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	860441	862051	.	-	.	ID=gene-PHA55_RS04155;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=PHA55_RS04155;old_locus_tag=PHA55_04155
NZ_CP116044.1	Protein Homology	CDS	860441	862051	.	-	0	ID=cds-WP_047675912.1;Parent=gene-PHA55_RS04155;Dbxref=Genbank:WP_047675912.1;Name=WP_047675912.1;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706020.1;locus_tag=PHA55_RS04155;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WP_047675912.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	862027	863010	.	-	.	ID=gene-PHA55_RS04160;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=PHA55_RS04160;old_locus_tag=PHA55_04160
NZ_CP116044.1	Protein Homology	CDS	862027	863010	.	-	0	ID=cds-WP_097743496.1;Parent=gene-PHA55_RS04160;Dbxref=Genbank:WP_097743496.1;Name=WP_097743496.1;Ontology_term=GO:0015888,GO:0030974,GO:0030975,GO:0030976,GO:0048502,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,thiamine pyrophosphate binding|0030976||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA,thiamine pyrophosphate transmembrane transport|0030974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706021.2;locus_tag=PHA55_RS04160;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_097743496.1;transl_table=11
NZ_CP116044.1	cmsearch	riboswitch	863041	863140	.	-	.	ID=id-NZ_CP116044.1:863041..863140;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
NZ_CP116044.1	RefSeq	gene	863174	864829	.	-	.	ID=gene-PHA55_RS04165;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=PHA55_RS04165;old_locus_tag=PHA55_04165
NZ_CP116044.1	Protein Homology	CDS	863174	864829	.	-	0	ID=cds-WP_001297366.1;Parent=gene-PHA55_RS04165;Dbxref=Genbank:WP_001297366.1;Name=WP_001297366.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706022.2;locus_tag=PHA55_RS04165;product=DNA-binding transcriptional regulator SgrR;protein_id=WP_001297366.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	864918	865049	.	+	.	ID=gene-PHA55_RS04170;Name=sgrT;gbkey=Gene;gene=sgrT;gene_biotype=protein_coding;locus_tag=PHA55_RS04170;old_locus_tag=PHA55_04170
NZ_CP116044.1	Protein Homology	CDS	864918	865049	.	+	0	ID=cds-WP_001248770.1;Parent=gene-PHA55_RS04170;Dbxref=Genbank:WP_001248770.1;Name=WP_001248770.1;gbkey=CDS;gene=sgrT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791237.1;locus_tag=PHA55_RS04170;product=glucose uptake inhibitor SgrT;protein_id=WP_001248770.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	865151	866329	.	+	.	ID=gene-PHA55_RS04175;Name=setA;gbkey=Gene;gene=setA;gene_biotype=protein_coding;locus_tag=PHA55_RS04175;old_locus_tag=PHA55_04175
NZ_CP116044.1	Protein Homology	CDS	865151	866329	.	+	0	ID=cds-WP_053293893.1;Parent=gene-PHA55_RS04175;Dbxref=Genbank:WP_053293893.1;Name=WP_053293893.1;gbkey=CDS;gene=setA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025293.1;locus_tag=PHA55_RS04175;product=sugar efflux transporter SetA;protein_id=WP_053293893.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	866378	866983	.	-	.	ID=gene-PHA55_RS04180;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=PHA55_RS04180;old_locus_tag=PHA55_04180
NZ_CP116044.1	Protein Homology	CDS	866378	866983	.	-	0	ID=cds-WP_000818228.1;Parent=gene-PHA55_RS04180;Dbxref=Genbank:WP_000818228.1;Name=WP_000818228.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414613.1;locus_tag=PHA55_RS04180;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_000818228.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	866994	868394	.	-	.	ID=gene-PHA55_RS04185;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=PHA55_RS04185;old_locus_tag=PHA55_04185
NZ_CP116044.1	Protein Homology	CDS	866994	868394	.	-	0	ID=cds-WP_001140652.1;Parent=gene-PHA55_RS04185;Dbxref=Genbank:WP_001140652.1;Name=WP_001140652.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414614.1;locus_tag=PHA55_RS04185;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_001140652.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	868397	869488	.	-	.	ID=gene-PHA55_RS04190;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=PHA55_RS04190;old_locus_tag=PHA55_04190
NZ_CP116044.1	Protein Homology	CDS	868397	869488	.	-	0	ID=cds-WP_000042353.1;Parent=gene-PHA55_RS04190;Dbxref=Genbank:WP_000042353.1;Name=WP_000042353.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=PHA55_RS04190;product=3-isopropylmalate dehydrogenase;protein_id=WP_000042353.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	869488	871059	.	-	.	ID=gene-PHA55_RS04195;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=PHA55_RS04195;old_locus_tag=PHA55_04195
NZ_CP116044.1	Protein Homology	CDS	869488	871059	.	-	0	ID=cds-WP_000082846.1;Parent=gene-PHA55_RS04195;Dbxref=Genbank:WP_000082846.1;Name=WP_000082846.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=PHA55_RS04195;product=2-isopropylmalate synthase;protein_id=WP_000082846.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	871152	871238	.	-	.	ID=gene-PHA55_RS04200;Name=leuL;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;locus_tag=PHA55_RS04200;old_locus_tag=PHA55_04200
NZ_CP116044.1	Protein Homology	CDS	871152	871238	.	-	0	ID=cds-WP_001300467.1;Parent=gene-PHA55_RS04200;Dbxref=Genbank:WP_001300467.1;Name=WP_001300467.1;gbkey=CDS;gene=leuL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308106.1;locus_tag=PHA55_RS04200;product=leu operon leader peptide;protein_id=WP_001300467.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	871898	872842	.	+	.	ID=gene-PHA55_RS04205;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=PHA55_RS04205;old_locus_tag=PHA55_04205
NZ_CP116044.1	Protein Homology	CDS	871898	872842	.	+	0	ID=cds-WP_001297362.1;Parent=gene-PHA55_RS04205;Dbxref=Genbank:WP_001297362.1;Name=WP_001297362.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=leuO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414618.4;locus_tag=PHA55_RS04205;product=transcriptional regulator LeuO;protein_id=WP_001297362.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	872997	873041	.	-	.	ID=gene-PHA55_RS04210;Name=PHA55_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS04210;old_locus_tag=PHA55_04210
NZ_CP116044.1	Protein Homology	CDS	872997	873041	.	-	0	ID=cds-WP_128566915.1;Parent=gene-PHA55_RS04210;Dbxref=Genbank:WP_128566915.1;Name=WP_128566915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518736.1;locus_tag=PHA55_RS04210;product=hypothetical protein;protein_id=WP_128566915.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	873160	874884	.	+	.	ID=gene-PHA55_RS04215;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=PHA55_RS04215;old_locus_tag=PHA55_04215
NZ_CP116044.1	Protein Homology	CDS	873160	874884	.	+	0	ID=cds-WP_106889034.1;Parent=gene-PHA55_RS04215;Dbxref=Genbank:WP_106889034.1;Name=WP_106889034.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079613.1;locus_tag=PHA55_RS04215;product=acetolactate synthase 3 large subunit;protein_id=WP_106889034.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	874887	875378	.	+	.	ID=gene-PHA55_RS04220;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=PHA55_RS04220;old_locus_tag=PHA55_04220
NZ_CP116044.1	Protein Homology	CDS	874887	875378	.	+	0	ID=cds-WP_001252744.1;Parent=gene-PHA55_RS04220;Dbxref=Genbank:WP_001252744.1;Name=WP_001252744.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=PHA55_RS04220;product=acetolactate synthase small subunit;protein_id=WP_001252744.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	875390	875476	.	+	.	ID=gene-PHA55_RS04225;Name=PHA55_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS04225;old_locus_tag=PHA55_04225
NZ_CP116044.1	Protein Homology	CDS	875390	875476	.	+	0	ID=cds-WP_001303787.1;Parent=gene-PHA55_RS04225;Dbxref=Genbank:WP_001303787.1;Name=WP_001303787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308110.1;locus_tag=PHA55_RS04225;product=fruR/shl operon leader peptide;protein_id=WP_001303787.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	875558	876562	.	+	.	ID=gene-PHA55_RS04230;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=PHA55_RS04230;old_locus_tag=PHA55_04230
NZ_CP116044.1	Protein Homology	CDS	875558	876562	.	+	0	ID=cds-WP_000762401.1;Parent=gene-PHA55_RS04230;Dbxref=Genbank:WP_000762401.1;Name=WP_000762401.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308111.1;locus_tag=PHA55_RS04230;product=catabolite repressor/activator;protein_id=WP_000762401.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	877164	877622	.	+	.	ID=gene-PHA55_RS04235;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=PHA55_RS04235;old_locus_tag=PHA55_04235
NZ_CP116044.1	Protein Homology	CDS	877164	877622	.	+	0	ID=cds-WP_001295770.1;Parent=gene-PHA55_RS04235;Dbxref=Genbank:WP_001295770.1;Name=WP_001295770.1;Ontology_term=GO:0051302,GO:0043565;gbkey=CDS;gene=mraZ;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of cell division|0051302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020325403.1;locus_tag=PHA55_RS04235;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_001295770.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	877624	878565	.	+	.	ID=gene-PHA55_RS04240;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=PHA55_RS04240;old_locus_tag=PHA55_04240
NZ_CP116044.1	Protein Homology	CDS	877624	878565	.	+	0	ID=cds-WP_000970479.1;Parent=gene-PHA55_RS04240;Dbxref=Genbank:WP_000970479.1;Name=WP_000970479.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=PHA55_RS04240;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_000970479.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	878562	878927	.	+	.	ID=gene-PHA55_RS04245;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=PHA55_RS04245;old_locus_tag=PHA55_04245
NZ_CP116044.1	Protein Homology	CDS	878562	878927	.	+	0	ID=cds-WP_000625658.1;Parent=gene-PHA55_RS04245;Dbxref=Genbank:WP_000625658.1;Name=WP_000625658.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=PHA55_RS04245;product=cell division protein FtsL;protein_id=WP_000625658.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	878943	880709	.	+	.	ID=gene-PHA55_RS04250;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=PHA55_RS04250;old_locus_tag=PHA55_04250
NZ_CP116044.1	Protein Homology	CDS	878943	880709	.	+	0	ID=cds-WP_000642196.1;Parent=gene-PHA55_RS04250;Dbxref=Genbank:WP_000642196.1;Name=WP_000642196.1;gbkey=CDS;gene=ftsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=PHA55_RS04250;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_000642196.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	880696	882183	.	+	.	ID=gene-PHA55_RS04255;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=PHA55_RS04255;old_locus_tag=PHA55_04255
NZ_CP116044.1	Protein Homology	CDS	880696	882183	.	+	0	ID=cds-WP_000785141.1;Parent=gene-PHA55_RS04255;Dbxref=Genbank:WP_000785141.1;Name=WP_000785141.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414627.1;locus_tag=PHA55_RS04255;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_000785141.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	882180	883538	.	+	.	ID=gene-PHA55_RS04260;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=PHA55_RS04260;old_locus_tag=PHA55_04260
NZ_CP116044.1	Protein Homology	CDS	882180	883538	.	+	0	ID=cds-WP_000626688.1;Parent=gene-PHA55_RS04260;Dbxref=Genbank:WP_000626688.1;Name=WP_000626688.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414628.1;locus_tag=PHA55_RS04260;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_000626688.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	883532	884614	.	+	.	ID=gene-PHA55_RS04265;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=PHA55_RS04265;old_locus_tag=PHA55_04265
NZ_CP116044.1	Protein Homology	CDS	883532	884614	.	+	0	ID=cds-WP_000964131.1;Parent=gene-PHA55_RS04265;Dbxref=Genbank:WP_000964131.1;Name=WP_000964131.1;Ontology_term=GO:0009252,GO:0008963;gbkey=CDS;gene=mraY;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=PHA55_RS04265;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_000964131.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	884617	885933	.	+	.	ID=gene-PHA55_RS04270;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=PHA55_RS04270;old_locus_tag=PHA55_04270
NZ_CP116044.1	Protein Homology	CDS	884617	885933	.	+	0	ID=cds-WP_000796467.1;Parent=gene-PHA55_RS04270;Dbxref=Genbank:WP_000796467.1;Name=WP_000796467.1;Ontology_term=GO:0009252,GO:0008764;gbkey=CDS;gene=murD;go_function=UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=PHA55_RS04270;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_000796467.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	885933	887177	.	+	.	ID=gene-PHA55_RS04275;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=PHA55_RS04275;old_locus_tag=PHA55_04275
NZ_CP116044.1	Protein Homology	CDS	885933	887177	.	+	0	ID=cds-WP_001295532.1;Parent=gene-PHA55_RS04275;Dbxref=Genbank:WP_001295532.1;Name=WP_001295532.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308120.1;locus_tag=PHA55_RS04275;product=cell division protein FtsW;protein_id=WP_001295532.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	887174	888241	.	+	.	ID=gene-PHA55_RS04280;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=PHA55_RS04280;old_locus_tag=PHA55_04280
NZ_CP116044.1	Protein Homology	CDS	887174	888241	.	+	0	ID=cds-WP_000016559.1;Parent=gene-PHA55_RS04280;Dbxref=Genbank:WP_000016559.1;Name=WP_000016559.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308121.1;locus_tag=PHA55_RS04280;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_000016559.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	888295	889770	.	+	.	ID=gene-PHA55_RS04285;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=PHA55_RS04285;old_locus_tag=PHA55_04285
NZ_CP116044.1	Protein Homology	CDS	888295	889770	.	+	0	ID=cds-WP_001096048.1;Parent=gene-PHA55_RS04285;Dbxref=Genbank:WP_001096048.1;Name=WP_001096048.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308122.1;locus_tag=PHA55_RS04285;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_001096048.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	889763	890683	.	+	.	ID=gene-PHA55_RS04290;Name=ddlB;gbkey=Gene;gene=ddlB;gene_biotype=protein_coding;locus_tag=PHA55_RS04290;old_locus_tag=PHA55_04290
NZ_CP116044.1	Protein Homology	CDS	889763	890683	.	+	0	ID=cds-WP_000130056.1;Parent=gene-PHA55_RS04290;Dbxref=Genbank:WP_000130056.1;Name=WP_000130056.1;gbkey=CDS;gene=ddlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414634.1;locus_tag=PHA55_RS04290;product=D-alanine--D-alanine ligase;protein_id=WP_000130056.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	890685	891515	.	+	.	ID=gene-PHA55_RS04295;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=PHA55_RS04295;old_locus_tag=PHA55_04295
NZ_CP116044.1	Protein Homology	CDS	890685	891515	.	+	0	ID=cds-WP_000075744.1;Parent=gene-PHA55_RS04295;Dbxref=Genbank:WP_000075744.1;Name=WP_000075744.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308124.1;locus_tag=PHA55_RS04295;product=cell division protein FtsQ;protein_id=WP_000075744.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	891512	892774	.	+	.	ID=gene-PHA55_RS04300;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=PHA55_RS04300;old_locus_tag=PHA55_04300
NZ_CP116044.1	Protein Homology	CDS	891512	892774	.	+	0	ID=cds-WP_000588474.1;Parent=gene-PHA55_RS04300;Dbxref=Genbank:WP_000588474.1;Name=WP_000588474.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308125.1;locus_tag=PHA55_RS04300;product=cell division protein FtsA;protein_id=WP_000588474.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	892835	893986	.	+	.	ID=gene-PHA55_RS04305;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=PHA55_RS04305;old_locus_tag=PHA55_04305
NZ_CP116044.1	Protein Homology	CDS	892835	893986	.	+	0	ID=cds-WP_000462776.1;Parent=gene-PHA55_RS04305;Dbxref=Genbank:WP_000462776.1;Name=WP_000462776.1;Ontology_term=GO:0000910,GO:0003924;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=PHA55_RS04305;product=cell division protein FtsZ;protein_id=WP_000462776.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	894087	895004	.	+	.	ID=gene-PHA55_RS04310;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=PHA55_RS04310;old_locus_tag=PHA55_04310
NZ_CP116044.1	Protein Homology	CDS	894087	895004	.	+	0	ID=cds-WP_000595482.1;Parent=gene-PHA55_RS04310;Dbxref=Genbank:WP_000595482.1;Name=WP_000595482.1;Ontology_term=GO:0009245,GO:0008759;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity|0008759||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308127.1;locus_tag=PHA55_RS04310;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_000595482.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	895235	895747	.	+	.	ID=gene-PHA55_RS04315;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=PHA55_RS04315;old_locus_tag=PHA55_04315
NZ_CP116044.1	Protein Homology	CDS	895235	895747	.	+	0	ID=cds-WP_000014321.1;Parent=gene-PHA55_RS04315;Dbxref=Genbank:WP_000014321.1;Name=WP_000014321.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414639.2;locus_tag=PHA55_RS04315;product=secA translation cis-regulator SecM;protein_id=WP_000014321.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	895809	898514	.	+	.	ID=gene-PHA55_RS04320;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=PHA55_RS04320;old_locus_tag=PHA55_04320
NZ_CP116044.1	Protein Homology	CDS	895809	898514	.	+	0	ID=cds-WP_000905789.1;Parent=gene-PHA55_RS04320;Dbxref=Genbank:WP_000905789.1;Name=WP_000905789.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414640.1;locus_tag=PHA55_RS04320;product=preprotein translocase subunit SecA;protein_id=WP_000905789.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	898574	898963	.	+	.	ID=gene-PHA55_RS04325;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=PHA55_RS04325;old_locus_tag=PHA55_04325
NZ_CP116044.1	Protein Homology	CDS	898574	898963	.	+	0	ID=cds-WP_000736013.1;Parent=gene-PHA55_RS04325;Dbxref=Genbank:WP_000736013.1;Name=WP_000736013.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414641.1;locus_tag=PHA55_RS04325;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_000736013.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	899233	900213	.	+	.	ID=gene-PHA55_RS04330;Name=PHA55_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS04330;old_locus_tag=PHA55_04330
NZ_CP116044.1	Protein Homology	CDS	899233	900213	.	+	0	ID=cds-WP_000399648.1-4;Parent=gene-PHA55_RS04330;Dbxref=Genbank:WP_000399648.1;Name=WP_000399648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904434.1;locus_tag=PHA55_RS04330;product=IS110-like element IS621 family transposase;protein_id=WP_000399648.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	900342	900539	.	-	.	ID=gene-PHA55_RS04335;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=PHA55_RS04335;old_locus_tag=PHA55_04335
NZ_CP116044.1	Protein Homology	CDS	900342	900539	.	-	0	ID=cds-WP_000005042.1;Parent=gene-PHA55_RS04335;Dbxref=Genbank:WP_000005042.1;Name=WP_000005042.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308132.1;locus_tag=PHA55_RS04335;product=DNA gyrase inhibitor YacG;protein_id=WP_000005042.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	900549	901292	.	-	.	ID=gene-PHA55_RS04340;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=PHA55_RS04340;old_locus_tag=PHA55_04340
NZ_CP116044.1	Protein Homology	CDS	900549	901292	.	-	0	ID=cds-WP_001194734.1;Parent=gene-PHA55_RS04340;Dbxref=Genbank:WP_001194734.1;Name=WP_001194734.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414644.1;locus_tag=PHA55_RS04340;product=cell division protein ZapD;protein_id=WP_001194734.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	901292	901912	.	-	.	ID=gene-PHA55_RS04345;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=PHA55_RS04345;old_locus_tag=PHA55_04345
NZ_CP116044.1	Protein Homology	CDS	901292	901912	.	-	0	ID=cds-WP_001269527.1;Parent=gene-PHA55_RS04345;Dbxref=Genbank:WP_001269527.1;Name=WP_001269527.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308134.1;locus_tag=PHA55_RS04345;product=dephospho-CoA kinase;protein_id=WP_001269527.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	901937	901981	.	+	.	ID=gene-PHA55_RS04350;Name=PHA55_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS04350;old_locus_tag=PHA55_04350
NZ_CP116044.1	Protein Homology	CDS	901937	901981	.	+	0	ID=cds-WP_120795372.1;Parent=gene-PHA55_RS04350;Dbxref=Genbank:WP_120795372.1;Name=WP_120795372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518737.1;locus_tag=PHA55_RS04350;product=protein YacM;protein_id=WP_120795372.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	902137	903180	.	+	.	ID=gene-PHA55_RS04355;Name=guaC;gbkey=Gene;gene=guaC;gene_biotype=protein_coding;locus_tag=PHA55_RS04355;old_locus_tag=PHA55_04355
NZ_CP116044.1	Protein Homology	CDS	902137	903180	.	+	0	ID=cds-WP_001217338.1;Parent=gene-PHA55_RS04355;Dbxref=Genbank:WP_001217338.1;Name=WP_001217338.1;Ontology_term=GO:0003920;gbkey=CDS;gene=guaC;go_function=GMP reductase activity|0003920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008461816.1;locus_tag=PHA55_RS04355;product=GMP reductase;protein_id=WP_001217338.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	903215	904417	.	-	.	ID=gene-PHA55_RS04360;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=PHA55_RS04360;old_locus_tag=PHA55_04360
NZ_CP116044.1	Protein Homology	CDS	903215	904417	.	-	0	ID=cds-WP_000157234.1;Parent=gene-PHA55_RS04360;Dbxref=Genbank:WP_000157234.1;Name=WP_000157234.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414648.1;locus_tag=PHA55_RS04360;product=protein transport protein HofC;protein_id=WP_000157234.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	904407	905792	.	-	.	ID=gene-PHA55_RS04365;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=PHA55_RS04365;old_locus_tag=PHA55_04365
NZ_CP116044.1	Protein Homology	CDS	904407	905792	.	-	0	ID=cds-WP_001025173.1;Parent=gene-PHA55_RS04365;Dbxref=Genbank:WP_001025173.1;Name=WP_001025173.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308138.1;locus_tag=PHA55_RS04365;product=type II secretion system protein GspE;protein_id=WP_001025173.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	905802	906242	.	-	.	ID=gene-PHA55_RS04370;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=PHA55_RS04370;old_locus_tag=PHA55_04370
NZ_CP116044.1	Protein Homology	CDS	905802	906242	.	-	0	ID=cds-WP_000360895.1;Parent=gene-PHA55_RS04370;Dbxref=Genbank:WP_000360895.1;Name=WP_000360895.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414650.1;locus_tag=PHA55_RS04370;product=prepilin peptidase-dependent pilin;protein_id=WP_000360895.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	906445	907338	.	-	.	ID=gene-PHA55_RS04375;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=PHA55_RS04375;old_locus_tag=PHA55_04375
NZ_CP116044.1	Protein Homology	CDS	906445	907338	.	-	0	ID=cds-WP_001135174.1;Parent=gene-PHA55_RS04375;Dbxref=Genbank:WP_001135174.1;Name=WP_001135174.1;Ontology_term=GO:0019363,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=pyridine nucleotide biosynthetic process|0019363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414651.1;locus_tag=PHA55_RS04375;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_001135174.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	907426	907977	.	+	.	ID=gene-PHA55_RS04380;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=PHA55_RS04380;old_locus_tag=PHA55_04380
NZ_CP116044.1	Protein Homology	CDS	907426	907977	.	+	0	ID=cds-WP_000923721.1;Parent=gene-PHA55_RS04380;Dbxref=Genbank:WP_000923721.1;Name=WP_000923721.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414652.1;locus_tag=PHA55_RS04380;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_000923721.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	907974	908828	.	+	.	ID=gene-PHA55_RS04385;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=PHA55_RS04385;old_locus_tag=PHA55_04385
NZ_CP116044.1	Protein Homology	CDS	907974	908828	.	+	0	ID=cds-WP_000172006.1;Parent=gene-PHA55_RS04385;Dbxref=Genbank:WP_000172006.1;Name=WP_000172006.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414653.1;locus_tag=PHA55_RS04385;product=beta-lactamase regulator AmpE;protein_id=WP_000172006.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	908871	910244	.	-	.	ID=gene-PHA55_RS04390;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=PHA55_RS04390;old_locus_tag=PHA55_04390
NZ_CP116044.1	Protein Homology	CDS	908871	910244	.	-	0	ID=cds-WP_000969914.1;Parent=gene-PHA55_RS04390;Dbxref=Genbank:WP_000969914.1;Name=WP_000969914.1;Ontology_term=GO:0006865;gbkey=CDS;gene=aroP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414654.1;locus_tag=PHA55_RS04390;product=aromatic amino acid transporter AroP;protein_id=WP_000969914.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	910785	911549	.	+	.	ID=gene-PHA55_RS04395;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=PHA55_RS04395;old_locus_tag=PHA55_04395
NZ_CP116044.1	Protein Homology	CDS	910785	911549	.	+	0	ID=cds-WP_000331776.1;Parent=gene-PHA55_RS04395;Dbxref=Genbank:WP_000331776.1;Name=WP_000331776.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308144.1;locus_tag=PHA55_RS04395;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WP_000331776.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	911710	914373	.	+	.	ID=gene-PHA55_RS04400;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=PHA55_RS04400;old_locus_tag=PHA55_04400
NZ_CP116044.1	Protein Homology	CDS	911710	914373	.	+	0	ID=cds-WP_000003820.1;Parent=gene-PHA55_RS04400;Dbxref=Genbank:WP_000003820.1;Name=WP_000003820.1;Ontology_term=GO:0006086,GO:0004738,GO:0045250;gbkey=CDS;gene=aceE;go_component=cytosolic pyruvate dehydrogenase complex|0045250||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=PHA55_RS04400;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_000003820.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	914388	916280	.	+	.	ID=gene-PHA55_RS04405;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=PHA55_RS04405;old_locus_tag=PHA55_04405
NZ_CP116044.1	Protein Homology	CDS	914388	916280	.	+	0	ID=cds-WP_000963564.1;Parent=gene-PHA55_RS04405;Dbxref=Genbank:WP_000963564.1;Name=WP_000963564.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414657.1;locus_tag=PHA55_RS04405;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_000963564.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	916605	918029	.	+	.	ID=gene-PHA55_RS04410;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=PHA55_RS04410;old_locus_tag=PHA55_04410
NZ_CP116044.1	Protein Homology	CDS	916605	918029	.	+	0	ID=cds-WP_000102485.1;Parent=gene-PHA55_RS04410;Dbxref=Genbank:WP_000102485.1;Name=WP_000102485.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=PHA55_RS04410;product=dihydrolipoyl dehydrogenase;protein_id=WP_000102485.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	918100	919857	.	-	.	ID=gene-PHA55_RS04415;Name=yacH;gbkey=Gene;gene=yacH;gene_biotype=protein_coding;locus_tag=PHA55_RS04415;old_locus_tag=PHA55_04415
NZ_CP116044.1	Protein Homology	CDS	918100	919857	.	-	0	ID=cds-WP_000784502.1;Parent=gene-PHA55_RS04415;Dbxref=Genbank:WP_000784502.1;Name=WP_000784502.1;gbkey=CDS;gene=yacH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308148.1;locus_tag=PHA55_RS04415;product=DUF3300 domain-containing protein;protein_id=WP_000784502.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	920212	922809	.	+	.	ID=gene-PHA55_RS04420;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=PHA55_RS04420;old_locus_tag=PHA55_04420
NZ_CP116044.1	Protein Homology	CDS	920212	922809	.	+	0	ID=cds-WP_001307570.1;Parent=gene-PHA55_RS04420;Dbxref=Genbank:WP_001307570.1;Name=WP_001307570.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnB;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414660.1;locus_tag=PHA55_RS04420;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_001307570.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	922984	923346	.	+	.	ID=gene-PHA55_RS04425;Name=yacL;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;locus_tag=PHA55_RS04425;old_locus_tag=PHA55_04425
NZ_CP116044.1	Protein Homology	CDS	922984	923346	.	+	0	ID=cds-WP_000384306.1;Parent=gene-PHA55_RS04425;Dbxref=Genbank:WP_000384306.1;Name=WP_000384306.1;gbkey=CDS;gene=yacL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414661.2;locus_tag=PHA55_RS04425;product=protein YacL;protein_id=WP_000384306.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	923384	924178	.	-	.	ID=gene-PHA55_RS04430;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=PHA55_RS04430;old_locus_tag=PHA55_04430
NZ_CP116044.1	Protein Homology	CDS	923384	924178	.	-	0	ID=cds-WP_000734287.1;Parent=gene-PHA55_RS04430;Dbxref=Genbank:WP_000734287.1;Name=WP_000734287.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308151.1;locus_tag=PHA55_RS04430;product=adenosylmethionine decarboxylase;protein_id=WP_000734287.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	924194	925060	.	-	.	ID=gene-PHA55_RS04435;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=PHA55_RS04435;old_locus_tag=PHA55_04435
NZ_CP116044.1	Protein Homology	CDS	924194	925060	.	-	0	ID=cds-WP_271287499.1;Parent=gene-PHA55_RS04435;Dbxref=Genbank:WP_271287499.1;Name=WP_271287499.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414663.1;locus_tag=PHA55_RS04435;product=polyamine aminopropyltransferase;protein_id=WP_271287499.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	925166	925513	.	-	.	ID=gene-PHA55_RS04440;Name=yacC;gbkey=Gene;gene=yacC;gene_biotype=protein_coding;locus_tag=PHA55_RS04440;old_locus_tag=PHA55_04440
NZ_CP116044.1	Protein Homology	CDS	925166	925513	.	-	0	ID=cds-WP_001295568.1;Parent=gene-PHA55_RS04440;Dbxref=Genbank:WP_001295568.1;Name=WP_001295568.1;gbkey=CDS;gene=yacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414664.4;locus_tag=PHA55_RS04440;product=YacC family pilotin-like protein;protein_id=WP_001295568.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	925679	927229	.	+	.	ID=gene-PHA55_RS04445;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=PHA55_RS04445;old_locus_tag=PHA55_04445
NZ_CP116044.1	Protein Homology	CDS	925679	927229	.	+	0	ID=cds-WP_001189600.1;Parent=gene-PHA55_RS04445;Dbxref=Genbank:WP_001189600.1;Name=WP_001189600.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414665.1;locus_tag=PHA55_RS04445;product=multicopper oxidase CueO;protein_id=WP_001189600.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	927276	929666	.	-	.	ID=gene-PHA55_RS04450;Name=gcd;gbkey=Gene;gene=gcd;gene_biotype=protein_coding;locus_tag=PHA55_RS04450;old_locus_tag=PHA55_04450
NZ_CP116044.1	Protein Homology	CDS	927276	929666	.	-	0	ID=cds-WP_001349940.1;Parent=gene-PHA55_RS04450;Dbxref=Genbank:WP_001349940.1;Name=WP_001349940.1;gbkey=CDS;gene=gcd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414666.1;locus_tag=PHA55_RS04450;product=quinoprotein glucose dehydrogenase;protein_id=WP_001349940.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	929872	930408	.	+	.	ID=gene-PHA55_RS04455;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=PHA55_RS04455;old_locus_tag=PHA55_04455
NZ_CP116044.1	Protein Homology	CDS	929872	930408	.	+	0	ID=cds-WP_000683335.1;Parent=gene-PHA55_RS04455;Dbxref=Genbank:WP_000683335.1;Name=WP_000683335.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204384.1;locus_tag=PHA55_RS04455;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_000683335.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	930449	931111	.	-	.	ID=gene-PHA55_RS04460;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=PHA55_RS04460;old_locus_tag=PHA55_04460
NZ_CP116044.1	Protein Homology	CDS	930449	931111	.	-	0	ID=cds-WP_000651599.1;Parent=gene-PHA55_RS04460;Dbxref=Genbank:WP_000651599.1;Name=WP_000651599.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414668.1;locus_tag=PHA55_RS04460;product=carbonate dehydratase;protein_id=WP_000651599.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	931220	932146	.	+	.	ID=gene-PHA55_RS04465;Name=yadG;gbkey=Gene;gene=yadG;gene_biotype=protein_coding;locus_tag=PHA55_RS04465;old_locus_tag=PHA55_04465
NZ_CP116044.1	Protein Homology	CDS	931220	932146	.	+	0	ID=cds-WP_000150637.1;Parent=gene-PHA55_RS04465;Dbxref=Genbank:WP_000150637.1;Name=WP_000150637.1;gbkey=CDS;gene=yadG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414669.1;locus_tag=PHA55_RS04465;product=ABC transporter ATP-binding protein;protein_id=WP_000150637.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	932143	932913	.	+	.	ID=gene-PHA55_RS04470;Name=yadH;gbkey=Gene;gene=yadH;gene_biotype=protein_coding;locus_tag=PHA55_RS04470;old_locus_tag=PHA55_04470
NZ_CP116044.1	Protein Homology	CDS	932143	932913	.	+	0	ID=cds-WP_000972203.1;Parent=gene-PHA55_RS04470;Dbxref=Genbank:WP_000972203.1;Name=WP_000972203.1;gbkey=CDS;gene=yadH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=PHA55_RS04470;product=ABC transporter permease;protein_id=WP_000972203.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	933018	933458	.	+	.	ID=gene-PHA55_RS04475;Name=yadI;gbkey=Gene;gene=yadI;gene_biotype=protein_coding;locus_tag=PHA55_RS04475;old_locus_tag=PHA55_04475
NZ_CP116044.1	Protein Homology	CDS	933018	933458	.	+	0	ID=cds-WP_000901989.1;Parent=gene-PHA55_RS04475;Dbxref=Genbank:WP_000901989.1;Name=WP_000901989.1;gbkey=CDS;gene=yadI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414671.1;locus_tag=PHA55_RS04475;product=PTS sugar transporter subunit IIA;protein_id=WP_000901989.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	933522	934751	.	+	.	ID=gene-PHA55_RS04480;Name=yadE;gbkey=Gene;gene=yadE;gene_biotype=protein_coding;locus_tag=PHA55_RS04480;old_locus_tag=PHA55_04480
NZ_CP116044.1	Protein Homology	CDS	933522	934751	.	+	0	ID=cds-WP_000277872.1;Parent=gene-PHA55_RS04480;Dbxref=Genbank:WP_000277872.1;Name=WP_000277872.1;gbkey=CDS;gene=yadE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414672.1;locus_tag=PHA55_RS04480;product=polysaccharide deacetylase family protein;protein_id=WP_000277872.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	934755	935135	.	-	.	ID=gene-PHA55_RS04485;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=PHA55_RS04485;old_locus_tag=PHA55_04485
NZ_CP116044.1	Protein Homology	CDS	934755	935135	.	-	0	ID=cds-WP_000621515.1;Parent=gene-PHA55_RS04485;Dbxref=Genbank:WP_000621515.1;Name=WP_000621515.1;Ontology_term=GO:0015940,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=PHA55_RS04485;product=aspartate 1-decarboxylase;protein_id=WP_000621515.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	935409	936311	.	+	.	ID=gene-PHA55_RS04490;Name=rpnC;gbkey=Gene;gene=rpnC;gene_biotype=protein_coding;locus_tag=PHA55_RS04490;old_locus_tag=PHA55_04490
NZ_CP116044.1	Protein Homology	CDS	935409	936311	.	+	0	ID=cds-WP_000339944.1;Parent=gene-PHA55_RS04490;Dbxref=Genbank:WP_000339944.1;Name=WP_000339944.1;gbkey=CDS;gene=rpnC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414674.1;locus_tag=PHA55_RS04490;product=recombination-promoting nuclease RpnC;protein_id=WP_000339944.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	936385	937236	.	-	.	ID=gene-PHA55_RS04495;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=PHA55_RS04495;old_locus_tag=PHA55_04495
NZ_CP116044.1	Protein Homology	CDS	936385	937236	.	-	0	ID=cds-WP_000905383.1;Parent=gene-PHA55_RS04495;Dbxref=Genbank:WP_000905383.1;Name=WP_000905383.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414675.1;locus_tag=PHA55_RS04495;product=pantoate--beta-alanine ligase;protein_id=WP_000905383.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	937248	938042	.	-	.	ID=gene-PHA55_RS04500;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=PHA55_RS04500;old_locus_tag=PHA55_04500
NZ_CP116044.1	Protein Homology	CDS	937248	938042	.	-	0	ID=cds-WP_000805455.1;Parent=gene-PHA55_RS04500;Dbxref=Genbank:WP_000805455.1;Name=WP_000805455.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805487.1;locus_tag=PHA55_RS04500;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_000805455.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	938155	939498	.	-	.	ID=gene-PHA55_RS04505;Name=PHA55_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS04505;old_locus_tag=PHA55_04505
NZ_CP116044.1	Protein Homology	CDS	938155	939498	.	-	0	ID=cds-WP_001331232.1;Parent=gene-PHA55_RS04505;Dbxref=Genbank:WP_001331232.1;Name=WP_001331232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001462196.1;locus_tag=PHA55_RS04505;product=fimbrial-like adhesin;protein_id=WP_001331232.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	939482	940078	.	-	.	ID=gene-PHA55_RS04510;Name=PHA55_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS04510;old_locus_tag=PHA55_04510
NZ_CP116044.1	Protein Homology	CDS	939482	940078	.	-	0	ID=cds-WP_000553764.1;Parent=gene-PHA55_RS04510;Dbxref=Genbank:WP_000553764.1;Name=WP_000553764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414678.1;locus_tag=PHA55_RS04510;product=fimbrial-like protein;protein_id=WP_000553764.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	940105	940707	.	-	.	ID=gene-PHA55_RS04515;Name=yadL;gbkey=Gene;gene=yadL;gene_biotype=protein_coding;locus_tag=PHA55_RS04515;old_locus_tag=PHA55_04515
NZ_CP116044.1	Protein Homology	CDS	940105	940707	.	-	0	ID=cds-WP_000143205.1;Parent=gene-PHA55_RS04515;Dbxref=Genbank:WP_000143205.1;Name=WP_000143205.1;gbkey=CDS;gene=yadL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000143198.1;locus_tag=PHA55_RS04515;product=fimbrial-like protein YadL;protein_id=WP_000143205.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	940722	941291	.	-	.	ID=gene-PHA55_RS04520;Name=yadM;gbkey=Gene;gene=yadM;gene_biotype=protein_coding;locus_tag=PHA55_RS04520;old_locus_tag=PHA55_04520
NZ_CP116044.1	Protein Homology	CDS	940722	941291	.	-	0	ID=cds-WP_000591057.1;Parent=gene-PHA55_RS04520;Dbxref=Genbank:WP_000591057.1;Name=WP_000591057.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yadM;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414680.4;locus_tag=PHA55_RS04520;product=fimbrial protein;protein_id=WP_000591057.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	941308	943908	.	-	.	ID=gene-PHA55_RS04525;Name=htrE;gbkey=Gene;gene=htrE;gene_biotype=protein_coding;locus_tag=PHA55_RS04525;old_locus_tag=PHA55_04525
NZ_CP116044.1	Protein Homology	CDS	941308	943908	.	-	0	ID=cds-WP_000153177.1;Parent=gene-PHA55_RS04525;Dbxref=Genbank:WP_000153177.1;Name=WP_000153177.1;gbkey=CDS;gene=htrE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414681.1;locus_tag=PHA55_RS04525;product=Yad fimbria usher protein HtrE;protein_id=WP_000153177.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	943943	944683	.	-	.	ID=gene-PHA55_RS04530;Name=yadV;gbkey=Gene;gene=yadV;gene_biotype=protein_coding;locus_tag=PHA55_RS04530;old_locus_tag=PHA55_04530
NZ_CP116044.1	Protein Homology	CDS	943943	944683	.	-	0	ID=cds-WP_000465930.1;Parent=gene-PHA55_RS04530;Dbxref=Genbank:WP_000465930.1;Name=WP_000465930.1;gbkey=CDS;gene=yadV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414682.1;locus_tag=PHA55_RS04530;product=fimbrial chaperone;protein_id=WP_000465930.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	944788	945372	.	-	.	ID=gene-PHA55_RS04535;Name=yadN;gbkey=Gene;gene=yadN;gene_biotype=protein_coding;locus_tag=PHA55_RS04535;old_locus_tag=PHA55_04535
NZ_CP116044.1	Protein Homology	CDS	944788	945372	.	-	0	ID=cds-WP_038995471.1;Parent=gene-PHA55_RS04535;Dbxref=Genbank:WP_038995471.1;Name=WP_038995471.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yadN;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414683.1;locus_tag=PHA55_RS04535;product=fimbrial protein;protein_id=WP_038995471.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	945742	946221	.	-	.	ID=gene-PHA55_RS04540;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=PHA55_RS04540;old_locus_tag=PHA55_04540
NZ_CP116044.1	Protein Homology	CDS	945742	946221	.	-	0	ID=cds-WP_000215124.1;Parent=gene-PHA55_RS04540;Dbxref=Genbank:WP_000215124.1;Name=WP_000215124.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706090.1;locus_tag=PHA55_RS04540;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_000215124.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	946218	947615	.	-	.	ID=gene-PHA55_RS04545;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=PHA55_RS04545;old_locus_tag=PHA55_04545
NZ_CP116044.1	Protein Homology	CDS	946218	947615	.	-	0	ID=cds-WP_010723084.1;Parent=gene-PHA55_RS04545;Dbxref=Genbank:WP_010723084.1;Name=WP_010723084.1;Ontology_term=GO:0006378,GO:0003723,GO:0004652;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,polynucleotide adenylyltransferase activity|0004652||IEA;go_process=mRNA polyadenylation|0006378||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414685.4;locus_tag=PHA55_RS04545;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_010723084.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	947675	948571	.	-	.	ID=gene-PHA55_RS04550;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=PHA55_RS04550;old_locus_tag=PHA55_04550
NZ_CP116044.1	Protein Homology	CDS	947675	948571	.	-	0	ID=cds-WP_000132718.1;Parent=gene-PHA55_RS04550;Dbxref=Genbank:WP_000132718.1;Name=WP_000132718.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001432381.1;locus_tag=PHA55_RS04550;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_000132718.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	948638	949093	.	-	.	ID=gene-PHA55_RS04555;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=PHA55_RS04555;old_locus_tag=PHA55_04555
NZ_CP116044.1	Protein Homology	CDS	948638	949093	.	-	0	ID=cds-WP_001155227.1;Parent=gene-PHA55_RS04555;Dbxref=Genbank:WP_001155227.1;Name=WP_001155227.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=PHA55_RS04555;product=RNA polymerase-binding protein DksA;protein_id=WP_001155227.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	949271	949975	.	-	.	ID=gene-PHA55_RS04560;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=PHA55_RS04560;old_locus_tag=PHA55_04560
NZ_CP116044.1	Protein Homology	CDS	949271	949975	.	-	0	ID=cds-WP_000396036.1;Parent=gene-PHA55_RS04560;Dbxref=Genbank:WP_000396036.1;Name=WP_000396036.1;Ontology_term=GO:0000023,GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;go_process=maltose metabolic process|0000023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308177.1;locus_tag=PHA55_RS04560;product=DNA/RNA nuclease SfsA;protein_id=WP_000396036.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	949990	950520	.	-	.	ID=gene-PHA55_RS04565;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=PHA55_RS04565;old_locus_tag=PHA55_04565
NZ_CP116044.1	Protein Homology	CDS	949990	950520	.	-	0	ID=cds-WP_001294697.1;Parent=gene-PHA55_RS04565;Dbxref=Genbank:WP_001294697.1;Name=WP_001294697.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,2'-5'-RNA ligase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414689.4;locus_tag=PHA55_RS04565;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_001294697.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	950594	953023	.	+	.	ID=gene-PHA55_RS04570;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=PHA55_RS04570;old_locus_tag=PHA55_04570
NZ_CP116044.1	Protein Homology	CDS	950594	953023	.	+	0	ID=cds-WP_024179452.1;Parent=gene-PHA55_RS04570;Dbxref=Genbank:WP_024179452.1;Name=WP_024179452.1;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414690.4;locus_tag=PHA55_RS04570;product=ATP-dependent helicase HrpB;protein_id=WP_024179452.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	953219	955753	.	+	.	ID=gene-PHA55_RS04575;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=PHA55_RS04575;old_locus_tag=PHA55_04575
NZ_CP116044.1	Protein Homology	CDS	953219	955753	.	+	0	ID=cds-WP_000918193.1;Parent=gene-PHA55_RS04575;Dbxref=Genbank:WP_000918193.1;Name=WP_000918193.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706097.2;locus_tag=PHA55_RS04575;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_000918193.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	955973	958216	.	+	.	ID=gene-PHA55_RS04580;Name=fhuA;gbkey=Gene;gene=fhuA;gene_biotype=protein_coding;locus_tag=PHA55_RS04580;old_locus_tag=PHA55_04580
NZ_CP116044.1	Protein Homology	CDS	955973	958216	.	+	0	ID=cds-WP_000124438.1;Parent=gene-PHA55_RS04580;Dbxref=Genbank:WP_000124438.1;Name=WP_000124438.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuA;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414692.1;locus_tag=PHA55_RS04580;product=ferrichrome porin FhuA;protein_id=WP_000124438.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	958267	959064	.	+	.	ID=gene-PHA55_RS04585;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=PHA55_RS04585;old_locus_tag=PHA55_04585
NZ_CP116044.1	Protein Homology	CDS	958267	959064	.	+	0	ID=cds-WP_001158929.1;Parent=gene-PHA55_RS04585;Dbxref=Genbank:WP_001158929.1;Name=WP_001158929.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308182.1;locus_tag=PHA55_RS04585;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=WP_001158929.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	959064	959954	.	+	.	ID=gene-PHA55_RS04590;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=PHA55_RS04590;old_locus_tag=PHA55_04590
NZ_CP116044.1	Protein Homology	CDS	959064	959954	.	+	0	ID=cds-WP_001307577.1;Parent=gene-PHA55_RS04590;Dbxref=Genbank:WP_001307577.1;Name=WP_001307577.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414694.1;locus_tag=PHA55_RS04590;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WP_001307577.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	959951	961933	.	+	.	ID=gene-PHA55_RS04595;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=PHA55_RS04595;old_locus_tag=PHA55_04595
NZ_CP116044.1	Protein Homology	CDS	959951	961933	.	+	0	ID=cds-WP_000044070.1;Parent=gene-PHA55_RS04595;Dbxref=Genbank:WP_000044070.1;Name=WP_000044070.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fhuB;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414695.1;locus_tag=PHA55_RS04595;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=WP_000044070.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	961968	963248	.	-	.	ID=gene-PHA55_RS04600;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=PHA55_RS04600;old_locus_tag=PHA55_04600
NZ_CP116044.1	Protein Homology	CDS	961968	963248	.	-	0	ID=cds-WP_271287500.1;Parent=gene-PHA55_RS04600;Dbxref=Genbank:WP_271287500.1;Name=WP_271287500.1;Ontology_term=GO:0006779,GO:0042286,GO:0005737;gbkey=CDS;gene=hemL;go_component=cytoplasm|0005737||IEA;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=PHA55_RS04600;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_271287500.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	963414	963461	.	+	.	ID=gene-PHA55_RS04605;Name=yadX;gbkey=Gene;gene=yadX;gene_biotype=protein_coding;locus_tag=PHA55_RS04605;old_locus_tag=PHA55_04605
NZ_CP116044.1	Protein Homology	CDS	963414	963461	.	+	0	ID=cds-WP_211180485.1;Parent=gene-PHA55_RS04605;Dbxref=Genbank:WP_211180485.1;Name=WP_211180485.1;gbkey=CDS;gene=yadX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051173.1;locus_tag=PHA55_RS04605;product=protein YadX;protein_id=WP_211180485.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	963473	964894	.	+	.	ID=gene-PHA55_RS04610;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=PHA55_RS04610;old_locus_tag=PHA55_04610
NZ_CP116044.1	Protein Homology	CDS	963473	964894	.	+	0	ID=cds-WP_000845395.1;Parent=gene-PHA55_RS04610;Dbxref=Genbank:WP_000845395.1;Name=WP_000845395.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414697.1;locus_tag=PHA55_RS04610;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=WP_000845395.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	964918	964983	.	+	.	ID=gene-PHA55_RS04615;Name=yadW;gbkey=Gene;gene=yadW;gene_biotype=protein_coding;locus_tag=PHA55_RS04615;old_locus_tag=PHA55_04615
NZ_CP116044.1	Protein Homology	CDS	964918	964983	.	+	0	ID=cds-WP_120795373.1;Parent=gene-PHA55_RS04615;Dbxref=Genbank:WP_120795373.1;Name=WP_120795373.1;gbkey=CDS;gene=yadW;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518738.1;locus_tag=PHA55_RS04615;product=small protein YadW;protein_id=WP_120795373.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	964976	965320	.	+	.	ID=gene-PHA55_RS04620;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=PHA55_RS04620;old_locus_tag=PHA55_04620
NZ_CP116044.1	Protein Homology	CDS	964976	965320	.	+	0	ID=cds-WP_001295564.1;Parent=gene-PHA55_RS04620;Dbxref=Genbank:WP_001295564.1;Name=WP_001295564.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=PHA55_RS04620;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_001295564.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	965367	965990	.	-	.	ID=gene-PHA55_RS04625;Name=yadS;gbkey=Gene;gene=yadS;gene_biotype=protein_coding;locus_tag=PHA55_RS04625;old_locus_tag=PHA55_04625
NZ_CP116044.1	Protein Homology	CDS	965367	965990	.	-	0	ID=cds-WP_000964221.1;Parent=gene-PHA55_RS04625;Dbxref=Genbank:WP_000964221.1;Name=WP_000964221.1;gbkey=CDS;gene=yadS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414699.1;locus_tag=PHA55_RS04625;product=TRIC cation channel family protein;protein_id=WP_000964221.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	966028	966828	.	-	.	ID=gene-PHA55_RS04630;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=PHA55_RS04630;old_locus_tag=PHA55_04630
NZ_CP116044.1	Protein Homology	CDS	966028	966828	.	-	0	ID=cds-WP_001129927.1;Parent=gene-PHA55_RS04630;Dbxref=Genbank:WP_001129927.1;Name=WP_001129927.1;Ontology_term=GO:0005524;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414700.1;locus_tag=PHA55_RS04630;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WP_001129927.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	966821	967519	.	-	.	ID=gene-PHA55_RS04635;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=PHA55_RS04635;old_locus_tag=PHA55_04635
NZ_CP116044.1	Protein Homology	CDS	966821	967519	.	-	0	ID=cds-WP_000689844.1;Parent=gene-PHA55_RS04635;Dbxref=Genbank:WP_000689844.1;Name=WP_000689844.1;Ontology_term=GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308190.1;locus_tag=PHA55_RS04635;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_000689844.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	967603	969120	.	+	.	ID=gene-PHA55_RS04640;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=PHA55_RS04640;old_locus_tag=PHA55_04640
NZ_CP116044.1	Protein Homology	CDS	967603	969120	.	+	0	ID=cds-WP_000057094.1;Parent=gene-PHA55_RS04640;Dbxref=Genbank:WP_000057094.1;Name=WP_000057094.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414702.1;locus_tag=PHA55_RS04640;product=dGTPase;protein_id=WP_000057094.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	969250	970674	.	+	.	ID=gene-PHA55_RS04645;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=PHA55_RS04645;old_locus_tag=PHA55_04645
NZ_CP116044.1	Protein Homology	CDS	969250	970674	.	+	0	ID=cds-WP_000753945.1;Parent=gene-PHA55_RS04645;Dbxref=Genbank:WP_000753945.1;Name=WP_000753945.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308192.1;locus_tag=PHA55_RS04645;product=serine endoprotease DegP;protein_id=WP_000753945.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	970829	971986	.	+	.	ID=gene-PHA55_RS04650;Name=cdaR;gbkey=Gene;gene=cdaR;gene_biotype=protein_coding;locus_tag=PHA55_RS04650;old_locus_tag=PHA55_04650
NZ_CP116044.1	Protein Homology	CDS	970829	971986	.	+	0	ID=cds-WP_000929439.1;Parent=gene-PHA55_RS04650;Dbxref=Genbank:WP_000929439.1;Name=WP_000929439.1;gbkey=CDS;gene=cdaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308193.1;locus_tag=PHA55_RS04650;product=DNA-binding transcriptional regulator CdaR;protein_id=WP_000929439.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	972075	972461	.	-	.	ID=gene-PHA55_RS04655;Name=yaeH;gbkey=Gene;gene=yaeH;gene_biotype=protein_coding;locus_tag=PHA55_RS04655;old_locus_tag=PHA55_04655
NZ_CP116044.1	Protein Homology	CDS	972075	972461	.	-	0	ID=cds-WP_000272188.1;Parent=gene-PHA55_RS04655;Dbxref=Genbank:WP_000272188.1;Name=WP_000272188.1;gbkey=CDS;gene=yaeH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272186.1;locus_tag=PHA55_RS04655;product=DUF3461 family protein;protein_id=WP_000272188.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	972776	973600	.	-	.	ID=gene-PHA55_RS04660;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=PHA55_RS04660;old_locus_tag=PHA55_04660
NZ_CP116044.1	Protein Homology	CDS	972776	973600	.	-	0	ID=cds-WP_001186650.1;Parent=gene-PHA55_RS04660;Dbxref=Genbank:WP_001186650.1;Name=WP_001186650.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=PHA55_RS04660;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_001186650.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	973631	976303	.	-	.	ID=gene-PHA55_RS04665;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=PHA55_RS04665;old_locus_tag=PHA55_04665
NZ_CP116044.1	Protein Homology	CDS	973631	976303	.	-	0	ID=cds-WP_001094571.1;Parent=gene-PHA55_RS04665;Dbxref=Genbank:WP_001094571.1;Name=WP_001094571.1;Ontology_term=GO:0006807,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308196.1;locus_tag=PHA55_RS04665;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_001094571.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	976365	977159	.	-	.	ID=gene-PHA55_RS04670;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=PHA55_RS04670;old_locus_tag=PHA55_04670
NZ_CP116044.1	Protein Homology	CDS	976365	977159	.	-	0	ID=cds-WP_001018194.1;Parent=gene-PHA55_RS04670;Dbxref=Genbank:WP_001018194.1;Name=WP_001018194.1;Ontology_term=GO:0036211;gbkey=CDS;gene=map;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308197.1;locus_tag=PHA55_RS04670;product=type I methionyl aminopeptidase;protein_id=WP_001018194.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	977527	978252	.	+	.	ID=gene-PHA55_RS04675;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=PHA55_RS04675;old_locus_tag=PHA55_04675
NZ_CP116044.1	Protein Homology	CDS	977527	978252	.	+	0	ID=cds-WP_000246884.1;Parent=gene-PHA55_RS04675;Dbxref=Genbank:WP_000246884.1;Name=WP_000246884.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsB;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=PHA55_RS04675;product=30S ribosomal protein S2;protein_id=WP_000246884.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	978510	979361	.	+	.	ID=gene-PHA55_RS04680;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=PHA55_RS04680;old_locus_tag=PHA55_04680
NZ_CP116044.1	Protein Homology	CDS	978510	979361	.	+	0	ID=cds-WP_000818114.1;Parent=gene-PHA55_RS04680;Dbxref=Genbank:WP_000818114.1;Name=WP_000818114.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=PHA55_RS04680;product=translation elongation factor Ts;protein_id=WP_000818114.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	979508	980233	.	+	.	ID=gene-PHA55_RS04685;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=PHA55_RS04685;old_locus_tag=PHA55_04685
NZ_CP116044.1	Protein Homology	CDS	979508	980233	.	+	0	ID=cds-WP_000224573.1;Parent=gene-PHA55_RS04685;Dbxref=Genbank:WP_000224573.1;Name=WP_000224573.1;Ontology_term=GO:0015949,GO:0033862;gbkey=CDS;gene=pyrH;go_function=UMP kinase activity|0033862||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=PHA55_RS04685;product=UMP kinase;protein_id=WP_000224573.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	980525	981082	.	+	.	ID=gene-PHA55_RS04690;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=PHA55_RS04690;old_locus_tag=PHA55_04690
NZ_CP116044.1	Protein Homology	CDS	980525	981082	.	+	0	ID=cds-WP_000622418.1;Parent=gene-PHA55_RS04690;Dbxref=Genbank:WP_000622418.1;Name=WP_000622418.1;Ontology_term=GO:0006412,GO:0008135,GO:0005737;gbkey=CDS;gene=frr;go_component=cytoplasm|0005737||IEA;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=PHA55_RS04690;product=ribosome recycling factor;protein_id=WP_000622418.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	981174	982370	.	+	.	ID=gene-PHA55_RS04695;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=PHA55_RS04695;old_locus_tag=PHA55_04695
NZ_CP116044.1	Protein Homology	CDS	981174	982370	.	+	0	ID=cds-WP_000811923.1;Parent=gene-PHA55_RS04695;Dbxref=Genbank:WP_000811923.1;Name=WP_000811923.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414715.1;locus_tag=PHA55_RS04695;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_000811923.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	982559	983317	.	+	.	ID=gene-PHA55_RS04700;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=PHA55_RS04700;old_locus_tag=PHA55_04700
NZ_CP116044.1	Protein Homology	CDS	982559	983317	.	+	0	ID=cds-WP_001295562.1;Parent=gene-PHA55_RS04700;Dbxref=Genbank:WP_001295562.1;Name=WP_001295562.1;Ontology_term=GO:0043164,GO:0002094,GO:0008834;gbkey=CDS;gene=ispU;go_function=polyprenyltransferase activity|0002094||IEA,di-trans%2Cpoly-cis-decaprenylcistransferase activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308203.2;locus_tag=PHA55_RS04700;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WP_001295562.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	983330	984187	.	+	.	ID=gene-PHA55_RS04705;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=PHA55_RS04705;old_locus_tag=PHA55_04705
NZ_CP116044.1	Protein Homology	CDS	983330	984187	.	+	0	ID=cds-WP_000922446.1;Parent=gene-PHA55_RS04705;Dbxref=Genbank:WP_000922446.1;Name=WP_000922446.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414717.2;locus_tag=PHA55_RS04705;product=phosphatidate cytidylyltransferase;protein_id=WP_000922446.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	984199	985551	.	+	.	ID=gene-PHA55_RS04710;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=PHA55_RS04710;old_locus_tag=PHA55_04710
NZ_CP116044.1	Protein Homology	CDS	984199	985551	.	+	0	ID=cds-WP_206303385.1;Parent=gene-PHA55_RS04710;Dbxref=Genbank:WP_206303385.1;Name=WP_206303385.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308205.1;locus_tag=PHA55_RS04710;product=sigma E protease regulator RseP;protein_id=WP_206303385.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	985581	988013	.	+	.	ID=gene-PHA55_RS04715;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=PHA55_RS04715;old_locus_tag=PHA55_04715
NZ_CP116044.1	Protein Homology	CDS	985581	988013	.	+	0	ID=cds-WP_001240896.1;Parent=gene-PHA55_RS04715;Dbxref=Genbank:WP_001240896.1;Name=WP_001240896.1;Ontology_term=GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308206.1;locus_tag=PHA55_RS04715;product=outer membrane protein assembly factor BamA;protein_id=WP_001240896.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	988135	988620	.	+	.	ID=gene-PHA55_RS04720;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=PHA55_RS04720;old_locus_tag=PHA55_04720
NZ_CP116044.1	Protein Homology	CDS	988135	988620	.	+	0	ID=cds-WP_000758956.1;Parent=gene-PHA55_RS04720;Dbxref=Genbank:WP_000758956.1;Name=WP_000758956.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308207.1;locus_tag=PHA55_RS04720;product=molecular chaperone Skp;protein_id=WP_000758956.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	988624	989649	.	+	.	ID=gene-PHA55_RS04725;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=PHA55_RS04725;old_locus_tag=PHA55_04725
NZ_CP116044.1	Protein Homology	CDS	988624	989649	.	+	0	ID=cds-WP_001139282.1;Parent=gene-PHA55_RS04725;Dbxref=Genbank:WP_001139282.1;Name=WP_001139282.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=PHA55_RS04725;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_001139282.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	989754	990209	.	+	.	ID=gene-PHA55_RS04730;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=PHA55_RS04730;old_locus_tag=PHA55_04730
NZ_CP116044.1	Protein Homology	CDS	989754	990209	.	+	0	ID=cds-WP_000210739.1;Parent=gene-PHA55_RS04730;Dbxref=Genbank:WP_000210739.1;Name=WP_000210739.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=PHA55_RS04730;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_000210739.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	990213	991001	.	+	.	ID=gene-PHA55_RS04735;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=PHA55_RS04735;old_locus_tag=PHA55_04735
NZ_CP116044.1	Protein Homology	CDS	990213	991001	.	+	0	ID=cds-WP_000565966.1;Parent=gene-PHA55_RS04735;Dbxref=Genbank:WP_000565966.1;Name=WP_000565966.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=PHA55_RS04735;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_000565966.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	991001	992149	.	+	.	ID=gene-PHA55_RS04740;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=PHA55_RS04740;old_locus_tag=PHA55_04740
NZ_CP116044.1	Protein Homology	CDS	991001	992149	.	+	0	ID=cds-WP_000139659.1;Parent=gene-PHA55_RS04740;Dbxref=Genbank:WP_000139659.1;Name=WP_000139659.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414724.1;locus_tag=PHA55_RS04740;product=lipid-A-disaccharide synthase;protein_id=WP_000139659.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	992146	992742	.	+	.	ID=gene-PHA55_RS04745;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=PHA55_RS04745;old_locus_tag=PHA55_04745
NZ_CP116044.1	Protein Homology	CDS	992146	992742	.	+	0	ID=cds-WP_000569430.1;Parent=gene-PHA55_RS04745;Dbxref=Genbank:WP_000569430.1;Name=WP_000569430.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414725.1;locus_tag=PHA55_RS04745;product=ribonuclease HII;protein_id=WP_000569430.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	992779	996261	.	+	.	ID=gene-PHA55_RS04750;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=PHA55_RS04750;old_locus_tag=PHA55_04750
NZ_CP116044.1	Protein Homology	CDS	992779	996261	.	+	0	ID=cds-WP_001294757.1;Parent=gene-PHA55_RS04750;Dbxref=Genbank:WP_001294757.1;Name=WP_001294757.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414726.1;locus_tag=PHA55_RS04750;product=DNA polymerase III subunit alpha;protein_id=WP_001294757.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	996274	997233	.	+	.	ID=gene-PHA55_RS04755;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=PHA55_RS04755;old_locus_tag=PHA55_04755
NZ_CP116044.1	Protein Homology	CDS	996274	997233	.	+	0	ID=cds-WP_000055741.1;Parent=gene-PHA55_RS04755;Dbxref=Genbank:WP_000055741.1;Name=WP_000055741.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=PHA55_RS04755;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_000055741.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	997332	999473	.	+	.	ID=gene-PHA55_RS04760;Name=ldcC;gbkey=Gene;gene=ldcC;gene_biotype=protein_coding;locus_tag=PHA55_RS04760;old_locus_tag=PHA55_04760
NZ_CP116044.1	Protein Homology	CDS	997332	999473	.	+	0	ID=cds-WP_001020973.1;Parent=gene-PHA55_RS04760;Dbxref=Genbank:WP_001020973.1;Name=WP_001020973.1;gbkey=CDS;gene=ldcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414728.1;locus_tag=PHA55_RS04760;product=lysine decarboxylase LdcC;protein_id=WP_001020973.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	999530	999919	.	+	.	ID=gene-PHA55_RS04765;Name=yaeR;gbkey=Gene;gene=yaeR;gene_biotype=protein_coding;locus_tag=PHA55_RS04765;old_locus_tag=PHA55_04765
NZ_CP116044.1	Protein Homology	CDS	999530	999919	.	+	0	ID=cds-WP_000901098.1;Parent=gene-PHA55_RS04765;Dbxref=Genbank:WP_000901098.1;Name=WP_000901098.1;gbkey=CDS;gene=yaeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308216.2;locus_tag=PHA55_RS04765;product=VOC family protein;protein_id=WP_000901098.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	999984	1001282	.	+	.	ID=gene-PHA55_RS04770;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=PHA55_RS04770;old_locus_tag=PHA55_04770
NZ_CP116044.1	Protein Homology	CDS	999984	1001282	.	+	0	ID=cds-WP_001676327.1;Parent=gene-PHA55_RS04770;Dbxref=Genbank:WP_001676327.1;Name=WP_001676327.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706133.1;locus_tag=PHA55_RS04770;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_001676327.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1001331	1001591	.	-	.	ID=gene-PHA55_RS04775;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=PHA55_RS04775;old_locus_tag=PHA55_04775
NZ_CP116044.1	Protein Homology	CDS	1001331	1001591	.	-	0	ID=cds-WP_000062312.1;Parent=gene-PHA55_RS04775;Dbxref=Genbank:WP_000062312.1;Name=WP_000062312.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706134.1;locus_tag=PHA55_RS04775;product=Rho-binding antiterminator;protein_id=WP_000062312.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1001578	1001778	.	-	.	ID=gene-PHA55_RS04780;Name=yaeP;gbkey=Gene;gene=yaeP;gene_biotype=protein_coding;locus_tag=PHA55_RS04780;old_locus_tag=PHA55_04780
NZ_CP116044.1	Protein Homology	CDS	1001578	1001778	.	-	0	ID=cds-WP_000417058.1;Parent=gene-PHA55_RS04780;Dbxref=Genbank:WP_000417058.1;Name=WP_000417058.1;gbkey=CDS;gene=yaeP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133967.1;locus_tag=PHA55_RS04780;product=YaeP family protein;protein_id=WP_000417058.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1001944	1002489	.	+	.	ID=gene-PHA55_RS04785;Name=yaeQ;gbkey=Gene;gene=yaeQ;gene_biotype=protein_coding;locus_tag=PHA55_RS04785;old_locus_tag=PHA55_04785
NZ_CP116044.1	Protein Homology	CDS	1001944	1002489	.	+	0	ID=cds-WP_001185290.1;Parent=gene-PHA55_RS04785;Dbxref=Genbank:WP_001185290.1;Name=WP_001185290.1;gbkey=CDS;gene=yaeQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414732.1;locus_tag=PHA55_RS04785;product=YaeQ family protein;protein_id=WP_001185290.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1002486	1002908	.	+	.	ID=gene-PHA55_RS04790;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=PHA55_RS04790;old_locus_tag=PHA55_04790
NZ_CP116044.1	Protein Homology	CDS	1002486	1002908	.	+	0	ID=cds-WP_000635545.1;Parent=gene-PHA55_RS04790;Dbxref=Genbank:WP_000635545.1;Name=WP_000635545.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308220.1;locus_tag=PHA55_RS04790;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_000635545.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1002922	1003632	.	+	.	ID=gene-PHA55_RS04795;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=PHA55_RS04795;old_locus_tag=PHA55_04795
NZ_CP116044.1	Protein Homology	CDS	1002922	1003632	.	+	0	ID=cds-WP_000239192.1;Parent=gene-PHA55_RS04795;Dbxref=Genbank:WP_000239192.1;Name=WP_000239192.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706138.1;locus_tag=PHA55_RS04795;product=envelope stress response activation lipoprotein NlpE;protein_id=WP_000239192.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1003882	1004862	.	+	.	ID=gene-PHA55_RS04800;Name=PHA55_RS04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS04800;old_locus_tag=PHA55_04800
NZ_CP116044.1	Protein Homology	CDS	1003882	1004862	.	+	0	ID=cds-WP_000399648.1-5;Parent=gene-PHA55_RS04800;Dbxref=Genbank:WP_000399648.1;Name=WP_000399648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904434.1;locus_tag=PHA55_RS04800;product=IS110-like element IS621 family transposase;protein_id=WP_000399648.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	1005066	1005889	.	-	.	ID=gene-PHA55_RS04805;Name=yaeF;gbkey=Gene;gene=yaeF;gene_biotype=pseudogene;locus_tag=PHA55_RS04805;old_locus_tag=PHA55_04805;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	1005066	1005889	.	-	0	ID=cds-PHA55_RS04805;Parent=gene-PHA55_RS04805;Note=frameshifted;gbkey=CDS;gene=yaeF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414735.4;locus_tag=PHA55_RS04805;product=YaeF family permuted papain-like enzyme;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	1005943	1007661	.	-	.	ID=gene-PHA55_RS04810;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=PHA55_RS04810;old_locus_tag=PHA55_04810
NZ_CP116044.1	Protein Homology	CDS	1005943	1007661	.	-	0	ID=cds-WP_001260712.1;Parent=gene-PHA55_RS04810;Dbxref=Genbank:WP_001260712.1;Name=WP_001260712.1;Ontology_term=GO:0006433,GO:0004827,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=PHA55_RS04810;product=proline--tRNA ligase;protein_id=WP_001260712.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1007773	1008480	.	-	.	ID=gene-PHA55_RS04815;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=PHA55_RS04815;old_locus_tag=PHA55_04815
NZ_CP116044.1	Protein Homology	CDS	1007773	1008480	.	-	0	ID=cds-WP_000094011.1;Parent=gene-PHA55_RS04815;Dbxref=Genbank:WP_000094011.1;Name=WP_000094011.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414737.1;locus_tag=PHA55_RS04815;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_000094011.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1008477	1008881	.	-	.	ID=gene-PHA55_RS04820;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=PHA55_RS04820;old_locus_tag=PHA55_04820
NZ_CP116044.1	Protein Homology	CDS	1008477	1008881	.	-	0	ID=cds-WP_001202329.1;Parent=gene-PHA55_RS04820;Dbxref=Genbank:WP_001202329.1;Name=WP_001202329.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414738.1;locus_tag=PHA55_RS04820;product=Rcs stress response system protein RcsF;protein_id=WP_001202329.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1008999	1009814	.	-	.	ID=gene-PHA55_RS04825;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=PHA55_RS04825;old_locus_tag=PHA55_04825
NZ_CP116044.1	Protein Homology	CDS	1008999	1009814	.	-	0	ID=cds-WP_000874224.1;Parent=gene-PHA55_RS04825;Dbxref=Genbank:WP_000874224.1;Name=WP_000874224.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706143.1;locus_tag=PHA55_RS04825;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=WP_000874224.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1009854	1010507	.	-	.	ID=gene-PHA55_RS04830;Name=metI;gbkey=Gene;gene=metI;gene_biotype=protein_coding;locus_tag=PHA55_RS04830;old_locus_tag=PHA55_04830
NZ_CP116044.1	Protein Homology	CDS	1009854	1010507	.	-	0	ID=cds-WP_001294600.1;Parent=gene-PHA55_RS04830;Dbxref=Genbank:WP_001294600.1;Name=WP_001294600.1;gbkey=CDS;gene=metI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=PHA55_RS04830;product=methionine ABC transporter permease MetI;protein_id=WP_001294600.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1010500	1011531	.	-	.	ID=gene-PHA55_RS04835;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=PHA55_RS04835;old_locus_tag=PHA55_04835
NZ_CP116044.1	Protein Homology	CDS	1010500	1011531	.	-	0	ID=cds-WP_000593994.1;Parent=gene-PHA55_RS04835;Dbxref=Genbank:WP_000593994.1;Name=WP_000593994.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009898,GO:0055052;gbkey=CDS;gene=metN;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=PHA55_RS04835;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_000593994.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1011719	1012294	.	+	.	ID=gene-PHA55_RS04840;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=PHA55_RS04840;old_locus_tag=PHA55_04840
NZ_CP116044.1	Protein Homology	CDS	1011719	1012294	.	+	0	ID=cds-WP_001140187.1;Parent=gene-PHA55_RS04840;Dbxref=Genbank:WP_001140187.1;Name=WP_001140187.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308229.1;locus_tag=PHA55_RS04840;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_001140187.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1012655	1014196	.	+	.	ID=gene-PHA55_RS04845;Name=PHA55_RS04845;gbkey=Gene;gene_biotype=rRNA;locus_tag=PHA55_RS04845;old_locus_tag=PHA55_04845
NZ_CP116044.1	cmsearch	rRNA	1012655	1014196	.	+	.	ID=rna-PHA55_RS04845;Parent=gene-PHA55_RS04845;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS04845;product=16S ribosomal RNA
NZ_CP116044.1	cmsearch	exon	1012655	1014196	.	+	.	ID=exon-PHA55_RS04845-1;Parent=rna-PHA55_RS04845;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS04845;product=16S ribosomal RNA
NZ_CP116044.1	RefSeq	gene	1014265	1014341	.	+	.	ID=gene-PHA55_RS04850;Name=PHA55_RS04850;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS04850;old_locus_tag=PHA55_04850
NZ_CP116044.1	tRNAscan-SE	tRNA	1014265	1014341	.	+	.	ID=rna-PHA55_RS04850;Parent=gene-PHA55_RS04850;anticodon=(pos:1014299..1014301);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS04850;product=tRNA-Ile
NZ_CP116044.1	tRNAscan-SE	exon	1014265	1014341	.	+	.	ID=exon-PHA55_RS04850-1;Parent=rna-PHA55_RS04850;anticodon=(pos:1014299..1014301);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS04850;product=tRNA-Ile
NZ_CP116044.1	RefSeq	gene	1014384	1014459	.	+	.	ID=gene-PHA55_RS04855;Name=PHA55_RS04855;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS04855;old_locus_tag=PHA55_04855
NZ_CP116044.1	tRNAscan-SE	tRNA	1014384	1014459	.	+	.	ID=rna-PHA55_RS04855;Parent=gene-PHA55_RS04855;anticodon=(pos:1014417..1014419);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS04855;product=tRNA-Ala
NZ_CP116044.1	tRNAscan-SE	exon	1014384	1014459	.	+	.	ID=exon-PHA55_RS04855-1;Parent=rna-PHA55_RS04855;anticodon=(pos:1014417..1014419);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS04855;product=tRNA-Ala
NZ_CP116044.1	RefSeq	gene	1014634	1017537	.	+	.	ID=gene-PHA55_RS04860;Name=PHA55_RS04860;gbkey=Gene;gene_biotype=rRNA;locus_tag=PHA55_RS04860;old_locus_tag=PHA55_04860
NZ_CP116044.1	cmsearch	rRNA	1014634	1017537	.	+	.	ID=rna-PHA55_RS04860;Parent=gene-PHA55_RS04860;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS04860;product=23S ribosomal RNA
NZ_CP116044.1	cmsearch	exon	1014634	1017537	.	+	.	ID=exon-PHA55_RS04860-1;Parent=rna-PHA55_RS04860;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS04860;product=23S ribosomal RNA
NZ_CP116044.1	RefSeq	gene	1017632	1017747	.	+	.	ID=gene-PHA55_RS04865;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PHA55_RS04865;old_locus_tag=PHA55_04865
NZ_CP116044.1	cmsearch	rRNA	1017632	1017747	.	+	.	ID=rna-PHA55_RS04865;Parent=gene-PHA55_RS04865;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS04865;product=5S ribosomal RNA
NZ_CP116044.1	cmsearch	exon	1017632	1017747	.	+	.	ID=exon-PHA55_RS04865-1;Parent=rna-PHA55_RS04865;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS04865;product=5S ribosomal RNA
NZ_CP116044.1	RefSeq	gene	1017941	1018017	.	+	.	ID=gene-PHA55_RS04870;Name=PHA55_RS04870;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS04870;old_locus_tag=PHA55_04870
NZ_CP116044.1	tRNAscan-SE	tRNA	1017941	1018017	.	+	.	ID=rna-PHA55_RS04870;Parent=gene-PHA55_RS04870;anticodon=(pos:1017975..1017977);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS04870;product=tRNA-Asp
NZ_CP116044.1	tRNAscan-SE	exon	1017941	1018017	.	+	.	ID=exon-PHA55_RS04870-1;Parent=rna-PHA55_RS04870;anticodon=(pos:1017975..1017977);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS04870;product=tRNA-Asp
NZ_CP116044.1	RefSeq	gene	1018180	1018983	.	+	.	ID=gene-PHA55_RS04875;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=PHA55_RS04875;old_locus_tag=PHA55_04875
NZ_CP116044.1	Protein Homology	CDS	1018180	1018983	.	+	0	ID=cds-WP_000997043.1;Parent=gene-PHA55_RS04875;Dbxref=Genbank:WP_000997043.1;Name=WP_000997043.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308230.1;locus_tag=PHA55_RS04875;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WP_000997043.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1018980	1019894	.	-	.	ID=gene-PHA55_RS04880;Name=yafC;gbkey=Gene;gene=yafC;gene_biotype=protein_coding;locus_tag=PHA55_RS04880;old_locus_tag=PHA55_04880
NZ_CP116044.1	Protein Homology	CDS	1018980	1019894	.	-	0	ID=cds-WP_000648572.1;Parent=gene-PHA55_RS04880;Dbxref=Genbank:WP_000648572.1;Name=WP_000648572.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yafC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414744.1;locus_tag=PHA55_RS04880;product=DNA-binding transcriptional regulator YafC;protein_id=WP_000648572.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1020135	1020935	.	+	.	ID=gene-PHA55_RS04885;Name=yafD;gbkey=Gene;gene=yafD;gene_biotype=protein_coding;locus_tag=PHA55_RS04885;old_locus_tag=PHA55_04885
NZ_CP116044.1	Protein Homology	CDS	1020135	1020935	.	+	0	ID=cds-WP_001230983.1;Parent=gene-PHA55_RS04885;Dbxref=Genbank:WP_001230983.1;Name=WP_001230983.1;gbkey=CDS;gene=yafD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414745.1;locus_tag=PHA55_RS04885;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_001230983.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1021013	1021783	.	+	.	ID=gene-PHA55_RS04890;Name=PHA55_RS04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS04890;old_locus_tag=PHA55_04890
NZ_CP116044.1	Protein Homology	CDS	1021013	1021783	.	+	0	ID=cds-WP_000211729.1;Parent=gene-PHA55_RS04890;Dbxref=Genbank:WP_000211729.1;Name=WP_000211729.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308233.1;locus_tag=PHA55_RS04890;product=class I SAM-dependent methyltransferase;protein_id=WP_000211729.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1021831	1023189	.	-	.	ID=gene-PHA55_RS04895;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=PHA55_RS04895;old_locus_tag=PHA55_04895
NZ_CP116044.1	Protein Homology	CDS	1021831	1023189	.	-	0	ID=cds-WP_000644685.1;Parent=gene-PHA55_RS04895;Dbxref=Genbank:WP_000644685.1;Name=WP_000644685.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414747.1;locus_tag=PHA55_RS04895;product=murein transglycosylase D;protein_id=WP_000644685.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1023261	1024016	.	-	.	ID=gene-PHA55_RS04900;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=PHA55_RS04900;old_locus_tag=PHA55_04900
NZ_CP116044.1	Protein Homology	CDS	1023261	1024016	.	-	0	ID=cds-WP_001052707.1;Parent=gene-PHA55_RS04900;Dbxref=Genbank:WP_001052707.1;Name=WP_001052707.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308235.1;locus_tag=PHA55_RS04900;product=hydroxyacylglutathione hydrolase;protein_id=WP_001052707.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1024050	1024772	.	+	.	ID=gene-PHA55_RS04905;Name=yafS;gbkey=Gene;gene=yafS;gene_biotype=protein_coding;locus_tag=PHA55_RS04905;old_locus_tag=PHA55_04905
NZ_CP116044.1	Protein Homology	CDS	1024050	1024772	.	+	0	ID=cds-WP_001295200.1;Parent=gene-PHA55_RS04905;Dbxref=Genbank:WP_001295200.1;Name=WP_001295200.1;gbkey=CDS;gene=yafS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414749.2;locus_tag=PHA55_RS04905;product=class I SAM-dependent methyltransferase;protein_id=WP_001295200.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1024769	1025236	.	-	.	ID=gene-PHA55_RS04910;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=PHA55_RS04910;old_locus_tag=PHA55_04910
NZ_CP116044.1	Protein Homology	CDS	1024769	1025236	.	-	0	ID=cds-WP_000917883.1;Parent=gene-PHA55_RS04910;Dbxref=Genbank:WP_000917883.1;Name=WP_000917883.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308237.1;locus_tag=PHA55_RS04910;product=ribonuclease HI;protein_id=WP_000917883.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1025301	1026032	.	+	.	ID=gene-PHA55_RS04915;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=PHA55_RS04915;old_locus_tag=PHA55_04915
NZ_CP116044.1	Protein Homology	CDS	1025301	1026032	.	+	0	ID=cds-WP_001297205.1;Parent=gene-PHA55_RS04915;Dbxref=Genbank:WP_001297205.1;Name=WP_001297205.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706156.2;locus_tag=PHA55_RS04915;product=DNA polymerase III subunit epsilon;protein_id=WP_001297205.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1026165	1026241	.	+	.	ID=gene-PHA55_RS04920;Name=PHA55_RS04920;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS04920;old_locus_tag=PHA55_04920
NZ_CP116044.1	tRNAscan-SE	tRNA	1026165	1026241	.	+	.	ID=rna-PHA55_RS04920;Parent=gene-PHA55_RS04920;anticodon=(pos:1026199..1026201);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS04920;product=tRNA-Asp
NZ_CP116044.1	tRNAscan-SE	exon	1026165	1026241	.	+	.	ID=exon-PHA55_RS04920-1;Parent=rna-PHA55_RS04920;anticodon=(pos:1026199..1026201);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS04920;product=tRNA-Asp
NZ_CP116044.1	RefSeq	gene	1026572	1027357	.	+	.	ID=gene-PHA55_RS04925;Name=yafT;gbkey=Gene;gene=yafT;gene_biotype=protein_coding;locus_tag=PHA55_RS04925;old_locus_tag=PHA55_04925
NZ_CP116044.1	Protein Homology	CDS	1026572	1027357	.	+	0	ID=cds-WP_001086142.1;Parent=gene-PHA55_RS04925;Dbxref=Genbank:WP_001086142.1;Name=WP_001086142.1;gbkey=CDS;gene=yafT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414752.1;locus_tag=PHA55_RS04925;product=aminopeptidase;protein_id=WP_001086142.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1027494	1027973	.	-	.	ID=gene-PHA55_RS04930;Name=ykfM;gbkey=Gene;gene=ykfM;gene_biotype=protein_coding;locus_tag=PHA55_RS04930;old_locus_tag=PHA55_04930
NZ_CP116044.1	Protein Homology	CDS	1027494	1027973	.	-	0	ID=cds-WP_001236649.1;Parent=gene-PHA55_RS04930;Dbxref=Genbank:WP_001236649.1;Name=WP_001236649.1;gbkey=CDS;gene=ykfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165307.1;locus_tag=PHA55_RS04930;product=protein YkfM;protein_id=WP_001236649.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1027983	1028897	.	-	.	ID=gene-PHA55_RS04935;Name=PHA55_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS04935;old_locus_tag=PHA55_04935
NZ_CP116044.1	Protein Homology	CDS	1027983	1028897	.	-	0	ID=cds-WP_000908057.1;Parent=gene-PHA55_RS04935;Dbxref=Genbank:WP_000908057.1;Name=WP_000908057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000908053.1;locus_tag=PHA55_RS04935;product=hypothetical protein;protein_id=WP_000908057.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1028941	1029423	.	-	.	ID=gene-PHA55_RS04940;Name=PHA55_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS04940;old_locus_tag=PHA55_04940
NZ_CP116044.1	Protein Homology	CDS	1028941	1029423	.	-	0	ID=cds-WP_001284199.1;Parent=gene-PHA55_RS04940;Dbxref=Genbank:WP_001284199.1;Name=WP_001284199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001284197.1;locus_tag=PHA55_RS04940;product=Hcp family type VI secretion system effector;protein_id=WP_001284199.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	1029350	1030799	.	-	.	ID=gene-PHA55_RS04945;Name=PHA55_RS04945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS04945;old_locus_tag=PHA55_04945;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	1029350	1030799	.	-	0	ID=cds-PHA55_RS04945;Parent=gene-PHA55_RS04945;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308244.1;locus_tag=PHA55_RS04945;product=VasL domain-containing protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	1030810	1034244	.	-	.	ID=gene-PHA55_RS04950;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=PHA55_RS04950;old_locus_tag=PHA55_04950
NZ_CP116044.1	Protein Homology	CDS	1030810	1034244	.	-	0	ID=cds-WP_260589739.1;Parent=gene-PHA55_RS04950;Dbxref=Genbank:WP_260589739.1;Name=WP_260589739.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssM;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308245.2;locus_tag=PHA55_RS04950;product=type VI secretion system membrane subunit TssM;protein_id=WP_260589739.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1034353	1035765	.	-	.	ID=gene-PHA55_RS04955;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=PHA55_RS04955;old_locus_tag=PHA55_04955
NZ_CP116044.1	Protein Homology	CDS	1034353	1035765	.	-	0	ID=cds-WP_001240545.1;Parent=gene-PHA55_RS04955;Dbxref=Genbank:WP_001240545.1;Name=WP_001240545.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743361.1;locus_tag=PHA55_RS04955;product=type VI secretion system protein TssA;protein_id=WP_001240545.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1035770	1036513	.	-	.	ID=gene-PHA55_RS04960;Name=vasI;gbkey=Gene;gene=vasI;gene_biotype=protein_coding;locus_tag=PHA55_RS04960;old_locus_tag=PHA55_04960
NZ_CP116044.1	Protein Homology	CDS	1035770	1036513	.	-	0	ID=cds-WP_112844679.1;Parent=gene-PHA55_RS04960;Dbxref=Genbank:WP_112844679.1;Name=WP_112844679.1;gbkey=CDS;gene=vasI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308249.1;locus_tag=PHA55_RS04960;product=type VI secretion system-associated protein VasI;protein_id=WP_112844679.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1036510	1039275	.	-	.	ID=gene-PHA55_RS04965;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;locus_tag=PHA55_RS04965;old_locus_tag=PHA55_04965
NZ_CP116044.1	Protein Homology	CDS	1036510	1039275	.	-	0	ID=cds-WP_000614399.1;Parent=gene-PHA55_RS04965;Dbxref=Genbank:WP_000614399.1;Name=WP_000614399.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308250.1;locus_tag=PHA55_RS04965;product=type VI secretion system ATPase TssH;protein_id=WP_000614399.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1039284	1040045	.	-	.	ID=gene-PHA55_RS04970;Name=icmH;gbkey=Gene;gene=icmH;gene_biotype=protein_coding;locus_tag=PHA55_RS04970;old_locus_tag=PHA55_04970
NZ_CP116044.1	Protein Homology	CDS	1039284	1040045	.	-	0	ID=cds-WP_000343302.1;Parent=gene-PHA55_RS04970;Dbxref=Genbank:WP_000343302.1;Name=WP_000343302.1;gbkey=CDS;gene=icmH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308251.1;locus_tag=PHA55_RS04970;product=type IVB secretion system protein IcmH/DotU;protein_id=WP_000343302.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1040050	1041381	.	-	.	ID=gene-PHA55_RS04975;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=PHA55_RS04975;old_locus_tag=PHA55_04975
NZ_CP116044.1	Protein Homology	CDS	1040050	1041381	.	-	0	ID=cds-WP_000246437.1;Parent=gene-PHA55_RS04975;Dbxref=Genbank:WP_000246437.1;Name=WP_000246437.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssK;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308252.1;locus_tag=PHA55_RS04975;product=type VI secretion system baseplate subunit TssK;protein_id=WP_000246437.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1041384	1041908	.	-	.	ID=gene-PHA55_RS04980;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=PHA55_RS04980;old_locus_tag=PHA55_04980
NZ_CP116044.1	Protein Homology	CDS	1041384	1041908	.	-	0	ID=cds-WP_001080149.1;Parent=gene-PHA55_RS04980;Dbxref=Genbank:WP_001080149.1;Name=WP_001080149.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssJ;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308253.1;locus_tag=PHA55_RS04980;product=type VI secretion system lipoprotein TssJ;protein_id=WP_001080149.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1041905	1043185	.	-	.	ID=gene-PHA55_RS04985;Name=tagH;gbkey=Gene;gene=tagH;gene_biotype=protein_coding;locus_tag=PHA55_RS04985;old_locus_tag=PHA55_04985
NZ_CP116044.1	Protein Homology	CDS	1041905	1043185	.	-	0	ID=cds-WP_001113725.1;Parent=gene-PHA55_RS04985;Dbxref=Genbank:WP_001113725.1;Name=WP_001113725.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tagH;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308254.1;locus_tag=PHA55_RS04985;product=type VI secretion system-associated FHA domain protein TagH;protein_id=WP_001113725.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1043210	1044292	.	-	.	ID=gene-PHA55_RS04990;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=PHA55_RS04990;old_locus_tag=PHA55_04990
NZ_CP116044.1	Protein Homology	CDS	1043210	1044292	.	-	0	ID=cds-WP_000348806.1;Parent=gene-PHA55_RS04990;Dbxref=Genbank:WP_000348806.1;Name=WP_000348806.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308255.1;locus_tag=PHA55_RS04990;product=type VI secretion system baseplate subunit TssG;protein_id=WP_000348806.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1044256	1046106	.	-	.	ID=gene-PHA55_RS04995;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=PHA55_RS04995;old_locus_tag=PHA55_04995
NZ_CP116044.1	Protein Homology	CDS	1044256	1046106	.	-	0	ID=cds-WP_000393845.1;Parent=gene-PHA55_RS04995;Dbxref=Genbank:WP_000393845.1;Name=WP_000393845.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssF;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308256.1;locus_tag=PHA55_RS04995;product=type VI secretion system baseplate subunit TssF;protein_id=WP_000393845.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1046110	1046523	.	-	.	ID=gene-PHA55_RS05000;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=PHA55_RS05000;old_locus_tag=PHA55_05000
NZ_CP116044.1	Protein Homology	CDS	1046110	1046523	.	-	0	ID=cds-WP_000611742.1;Parent=gene-PHA55_RS05000;Dbxref=Genbank:WP_000611742.1;Name=WP_000611742.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssE;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308257.1;locus_tag=PHA55_RS05000;product=type VI secretion system baseplate subunit TssE;protein_id=WP_000611742.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1046530	1048005	.	-	.	ID=gene-PHA55_RS05005;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=PHA55_RS05005;old_locus_tag=PHA55_05005
NZ_CP116044.1	Protein Homology	CDS	1046530	1048005	.	-	0	ID=cds-WP_000056978.1;Parent=gene-PHA55_RS05005;Dbxref=Genbank:WP_000056978.1;Name=WP_000056978.1;Ontology_term=GO:0033103,GO:0003674,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001501045.1;locus_tag=PHA55_RS05005;product=type VI secretion system contractile sheath large subunit;protein_id=WP_000056978.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1048056	1048280	.	-	.	ID=gene-PHA55_RS05010;Name=PHA55_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05010;old_locus_tag=PHA55_05010
NZ_CP116044.1	Protein Homology	CDS	1048056	1048280	.	-	0	ID=cds-WP_000123970.1;Parent=gene-PHA55_RS05010;Dbxref=Genbank:WP_000123970.1;Name=WP_000123970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308259.1;locus_tag=PHA55_RS05010;product=hypothetical protein;protein_id=WP_000123970.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1048315	1048815	.	-	.	ID=gene-PHA55_RS05015;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=PHA55_RS05015;old_locus_tag=PHA55_05015
NZ_CP116044.1	Protein Homology	CDS	1048315	1048815	.	-	0	ID=cds-WP_000037391.1;Parent=gene-PHA55_RS05015;Dbxref=Genbank:WP_000037391.1;Name=WP_000037391.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssB;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308260.1;locus_tag=PHA55_RS05015;product=type VI secretion system contractile sheath small subunit;protein_id=WP_000037391.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1049513	1050031	.	+	.	ID=gene-PHA55_RS05020;Name=PHA55_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05020;old_locus_tag=PHA55_05020
NZ_CP116044.1	Protein Homology	CDS	1049513	1050031	.	+	0	ID=cds-WP_001142958.1;Parent=gene-PHA55_RS05020;Dbxref=Genbank:WP_001142958.1;Name=WP_001142958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308261.1;locus_tag=PHA55_RS05020;product=Hcp family type VI secretion system effector;protein_id=WP_001142958.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1050241	1052382	.	+	.	ID=gene-PHA55_RS05025;Name=PHA55_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05025;old_locus_tag=PHA55_05025
NZ_CP116044.1	Protein Homology	CDS	1050241	1052382	.	+	0	ID=cds-WP_260589737.1;Parent=gene-PHA55_RS05025;Dbxref=Genbank:WP_260589737.1;Name=WP_260589737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308263.1;locus_tag=PHA55_RS05025;product=type VI secretion system tip protein VgrG;protein_id=WP_260589737.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1052458	1056957	.	+	.	ID=gene-PHA55_RS05030;Name=PHA55_RS05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05030;old_locus_tag=PHA55_05030
NZ_CP116044.1	Protein Homology	CDS	1052458	1056957	.	+	0	ID=cds-WP_271287501.1;Parent=gene-PHA55_RS05030;Dbxref=Genbank:WP_271287501.1;Name=WP_271287501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000508713.1;locus_tag=PHA55_RS05030;product=RHS element core protein;protein_id=WP_271287501.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1056954	1057211	.	+	.	ID=gene-PHA55_RS05035;Name=PHA55_RS05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05035;old_locus_tag=PHA55_05035
NZ_CP116044.1	Protein Homology	CDS	1056954	1057211	.	+	0	ID=cds-WP_000786991.1;Parent=gene-PHA55_RS05035;Dbxref=Genbank:WP_000786991.1;Name=WP_000786991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000786991.1;locus_tag=PHA55_RS05035;product=hypothetical protein;protein_id=WP_000786991.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1057812	1058948	.	+	.	ID=gene-PHA55_RS05040;Name=PHA55_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05040;old_locus_tag=PHA55_05040
NZ_CP116044.1	Protein Homology	CDS	1057812	1058948	.	+	0	ID=cds-WP_033882877.1;Parent=gene-PHA55_RS05040;Dbxref=Genbank:WP_033882877.1;Name=WP_033882877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006229500.1;locus_tag=PHA55_RS05040;product=ISAs1-like element ISEc1 family transposase;protein_id=WP_033882877.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1058948	1060048	.	+	.	ID=gene-PHA55_RS05045;Name=PHA55_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05045;old_locus_tag=PHA55_05045
NZ_CP116044.1	Protein Homology	CDS	1058948	1060048	.	+	0	ID=cds-WP_033882874.1;Parent=gene-PHA55_RS05045;Dbxref=Genbank:WP_033882874.1;Name=WP_033882874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=PHA55_RS05045;product=ISAs1-like element ISEc1 family transposase;protein_id=WP_033882874.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1060090	1060860	.	-	.	ID=gene-PHA55_RS05050;Name=yafV;gbkey=Gene;gene=yafV;gene_biotype=protein_coding;locus_tag=PHA55_RS05050;old_locus_tag=PHA55_05050
NZ_CP116044.1	Protein Homology	CDS	1060090	1060860	.	-	0	ID=cds-WP_001118029.1;Parent=gene-PHA55_RS05050;Dbxref=Genbank:WP_001118029.1;Name=WP_001118029.1;gbkey=CDS;gene=yafV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308273.1;locus_tag=PHA55_RS05050;product=2-oxoglutaramate amidase;protein_id=WP_001118029.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1061041	1061487	.	+	.	ID=gene-PHA55_RS05055;Name=ivy;gbkey=Gene;gene=ivy;gene_biotype=protein_coding;locus_tag=PHA55_RS05055;old_locus_tag=PHA55_05055
NZ_CP116044.1	Protein Homology	CDS	1061041	1061487	.	+	0	ID=cds-WP_001308392.1;Parent=gene-PHA55_RS05055;Dbxref=Genbank:WP_001308392.1;Name=WP_001308392.1;gbkey=CDS;gene=ivy;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308274.2;locus_tag=PHA55_RS05055;product=Ivy family C-type lysozyme inhibitor;protein_id=WP_001308392.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1061530	1063974	.	-	.	ID=gene-PHA55_RS05060;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=PHA55_RS05060;old_locus_tag=PHA55_05060
NZ_CP116044.1	Protein Homology	CDS	1061530	1063974	.	-	0	ID=cds-WP_000973081.1;Parent=gene-PHA55_RS05060;Dbxref=Genbank:WP_000973081.1;Name=WP_000973081.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414756.2;locus_tag=PHA55_RS05060;product=acyl-CoA dehydrogenase FadE;protein_id=WP_000973081.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1064214	1064792	.	+	.	ID=gene-PHA55_RS05065;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=PHA55_RS05065;old_locus_tag=PHA55_05065
NZ_CP116044.1	Protein Homology	CDS	1064214	1064792	.	+	0	ID=cds-WP_000284050.1;Parent=gene-PHA55_RS05065;Dbxref=Genbank:WP_000284050.1;Name=WP_000284050.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308276.1;locus_tag=PHA55_RS05065;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_000284050.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1064998	1065765	.	+	.	ID=gene-PHA55_RS05070;Name=yafJ;gbkey=Gene;gene=yafJ;gene_biotype=protein_coding;locus_tag=PHA55_RS05070;old_locus_tag=PHA55_05070
NZ_CP116044.1	Protein Homology	CDS	1064998	1065765	.	+	0	ID=cds-WP_000333380.1;Parent=gene-PHA55_RS05070;Dbxref=Genbank:WP_000333380.1;Name=WP_000333380.1;gbkey=CDS;gene=yafJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414758.1;locus_tag=PHA55_RS05070;product=class II glutamine amidotransferase;protein_id=WP_000333380.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1065736	1066476	.	-	.	ID=gene-PHA55_RS05075;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=PHA55_RS05075;old_locus_tag=PHA55_05075
NZ_CP116044.1	Protein Homology	CDS	1065736	1066476	.	-	0	ID=cds-WP_001225679.1;Parent=gene-PHA55_RS05075;Dbxref=Genbank:WP_001225679.1;Name=WP_001225679.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308278.1;locus_tag=PHA55_RS05075;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=WP_001225679.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1066632	1066910	.	-	.	ID=gene-PHA55_RS05080;Name=yafQ;gbkey=Gene;gene=yafQ;gene_biotype=protein_coding;locus_tag=PHA55_RS05080;old_locus_tag=PHA55_05080
NZ_CP116044.1	Protein Homology	CDS	1066632	1066910	.	-	0	ID=cds-WP_000615982.1;Parent=gene-PHA55_RS05080;Dbxref=Genbank:WP_000615982.1;Name=WP_000615982.1;gbkey=CDS;gene=yafQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414760.1;locus_tag=PHA55_RS05080;product=type II toxin-antitoxin system mRNA interferase toxin YafQ;protein_id=WP_000615982.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1066913	1067173	.	-	.	ID=gene-PHA55_RS05085;Name=dinJ;gbkey=Gene;gene=dinJ;gene_biotype=protein_coding;locus_tag=PHA55_RS05085;old_locus_tag=PHA55_05085
NZ_CP116044.1	Protein Homology	CDS	1066913	1067173	.	-	0	ID=cds-WP_000729704.1;Parent=gene-PHA55_RS05085;Dbxref=Genbank:WP_000729704.1;Name=WP_000729704.1;gbkey=CDS;gene=dinJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308280.1;locus_tag=PHA55_RS05085;product=type II toxin-antitoxin system antitoxin DinJ;protein_id=WP_000729704.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1067359	1068132	.	+	.	ID=gene-PHA55_RS05090;Name=yafL;gbkey=Gene;gene=yafL;gene_biotype=protein_coding;locus_tag=PHA55_RS05090;old_locus_tag=PHA55_05090
NZ_CP116044.1	Protein Homology	CDS	1067359	1068132	.	+	0	ID=cds-WP_000543899.1;Parent=gene-PHA55_RS05090;Dbxref=Genbank:WP_000543899.1;Name=WP_000543899.1;gbkey=CDS;gene=yafL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308281.2;locus_tag=PHA55_RS05090;product=C40 family peptidase;protein_id=WP_000543899.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1068189	1068545	.	-	.	ID=gene-PHA55_RS05095;Name=PHA55_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05095;old_locus_tag=PHA55_05095
NZ_CP116044.1	Protein Homology	CDS	1068189	1068545	.	-	0	ID=cds-WP_001030484.1;Parent=gene-PHA55_RS05095;Dbxref=Genbank:WP_001030484.1;Name=WP_001030484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001030479.1;locus_tag=PHA55_RS05095;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_001030484.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1068538	1068816	.	-	.	ID=gene-PHA55_RS05100;Name=PHA55_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05100;old_locus_tag=PHA55_05100
NZ_CP116044.1	Protein Homology	CDS	1068538	1068816	.	-	0	ID=cds-WP_000598760.1;Parent=gene-PHA55_RS05100;Dbxref=Genbank:WP_000598760.1;Name=WP_000598760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000598761.1;locus_tag=PHA55_RS05100;product=type II toxin-antitoxin system HicA family toxin;protein_id=WP_000598760.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1068921	1071014	.	-	.	ID=gene-PHA55_RS05105;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=PHA55_RS05105;old_locus_tag=PHA55_05105
NZ_CP116044.1	Protein Homology	CDS	1068921	1071014	.	-	0	ID=cds-WP_001140806.1;Parent=gene-PHA55_RS05105;Dbxref=Genbank:WP_001140806.1;Name=WP_001140806.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=flhA;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001140831.1;locus_tag=PHA55_RS05105;product=flagellar biosynthesis protein FlhA;protein_id=WP_001140806.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1070998	1072137	.	-	.	ID=gene-PHA55_RS05110;Name=PHA55_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05110;old_locus_tag=PHA55_05110
NZ_CP116044.1	Protein Homology	CDS	1070998	1072137	.	-	0	ID=cds-WP_032216948.1;Parent=gene-PHA55_RS05110;Dbxref=Genbank:WP_032216948.1;Name=WP_032216948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016236920.1;locus_tag=PHA55_RS05110;product=flagellar type III secretion system protein FlhB;protein_id=WP_032216948.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1072127	1072909	.	-	.	ID=gene-PHA55_RS05115;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=PHA55_RS05115;old_locus_tag=PHA55_05115
NZ_CP116044.1	Protein Homology	CDS	1072127	1072909	.	-	0	ID=cds-WP_001260503.1;Parent=gene-PHA55_RS05115;Dbxref=Genbank:WP_001260503.1;Name=WP_001260503.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001260509.1;locus_tag=PHA55_RS05115;product=flagellar biosynthetic protein FliR;protein_id=WP_001260503.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1072911	1073183	.	-	.	ID=gene-PHA55_RS05120;Name=PHA55_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05120;old_locus_tag=PHA55_05120
NZ_CP116044.1	Protein Homology	CDS	1072911	1073183	.	-	0	ID=cds-WP_001341234.1;Parent=gene-PHA55_RS05120;Dbxref=Genbank:WP_001341234.1;Name=WP_001341234.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001341234.1;locus_tag=PHA55_RS05120;product=flagellar biosynthetic protein FliQ;protein_id=WP_001341234.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1073186	1073938	.	-	.	ID=gene-PHA55_RS05125;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=PHA55_RS05125;old_locus_tag=PHA55_05125
NZ_CP116044.1	Protein Homology	CDS	1073186	1073938	.	-	0	ID=cds-WP_000830280.1;Parent=gene-PHA55_RS05125;Dbxref=Genbank:WP_000830280.1;Name=WP_000830280.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0001539;gbkey=CDS;gene=fliP;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538309.1;locus_tag=PHA55_RS05125;product=flagellar type III secretion system pore protein FliP;protein_id=WP_000830280.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1073935	1074306	.	-	.	ID=gene-PHA55_RS05130;Name=PHA55_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05130;old_locus_tag=PHA55_05130
NZ_CP116044.1	Protein Homology	CDS	1073935	1074306	.	-	0	ID=cds-WP_000043127.1;Parent=gene-PHA55_RS05130;Dbxref=Genbank:WP_000043127.1;Name=WP_000043127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233859.1;locus_tag=PHA55_RS05130;product=FliM/FliN family flagellar motor switch protein;protein_id=WP_000043127.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1074299	1075150	.	-	.	ID=gene-PHA55_RS05135;Name=PHA55_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05135;old_locus_tag=PHA55_05135
NZ_CP116044.1	Protein Homology	CDS	1074299	1075150	.	-	0	ID=cds-WP_000922506.1;Parent=gene-PHA55_RS05135;Dbxref=Genbank:WP_000922506.1;Name=WP_000922506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000922508.1;locus_tag=PHA55_RS05135;product=FliM/FliN family flagellar motor switch protein;protein_id=WP_000922506.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1075537	1076523	.	+	.	ID=gene-PHA55_RS05140;Name=PHA55_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05140;old_locus_tag=PHA55_05140
NZ_CP116044.1	Protein Homology	CDS	1075537	1076523	.	+	0	ID=cds-WP_001292212.1;Parent=gene-PHA55_RS05140;Dbxref=Genbank:WP_001292212.1;Name=WP_001292212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001292201.1;locus_tag=PHA55_RS05140;product=sigma-54 dependent transcriptional regulator;protein_id=WP_001292212.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1076538	1076879	.	+	.	ID=gene-PHA55_RS05145;Name=PHA55_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05145;old_locus_tag=PHA55_05145
NZ_CP116044.1	Protein Homology	CDS	1076538	1076879	.	+	0	ID=cds-WP_000029081.1;Parent=gene-PHA55_RS05145;Dbxref=Genbank:WP_000029081.1;Name=WP_000029081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538312.1;locus_tag=PHA55_RS05145;product=flagellar hook-basal body complex protein FliE;protein_id=WP_000029081.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1076884	1078530	.	+	.	ID=gene-PHA55_RS05150;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=PHA55_RS05150;old_locus_tag=PHA55_05150
NZ_CP116044.1	Protein Homology	CDS	1076884	1078530	.	+	0	ID=cds-WP_000993687.1;Parent=gene-PHA55_RS05150;Dbxref=Genbank:WP_000993687.1;Name=WP_000993687.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001643010.1;locus_tag=PHA55_RS05150;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_000993687.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1078508	1079518	.	+	.	ID=gene-PHA55_RS05155;Name=PHA55_RS05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05155;old_locus_tag=PHA55_05155
NZ_CP116044.1	Protein Homology	CDS	1078508	1079518	.	+	0	ID=cds-WP_001293171.1;Parent=gene-PHA55_RS05155;Dbxref=Genbank:WP_001293171.1;Name=WP_001293171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001293121.1;locus_tag=PHA55_RS05155;product=flagellar motor switch protein FliG;protein_id=WP_001293171.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	1079521	1080231	.	+	.	ID=gene-PHA55_RS05160;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=pseudogene;locus_tag=PHA55_RS05160;old_locus_tag=PHA55_05160;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	1079521	1080231	.	+	0	ID=cds-PHA55_RS05160;Parent=gene-PHA55_RS05160;Note=internal stop;gbkey=CDS;gene=fliH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521882.1;locus_tag=PHA55_RS05160;product=flagellar assembly protein FliH;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	1080224	1081561	.	+	.	ID=gene-PHA55_RS05165;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=PHA55_RS05165;old_locus_tag=PHA55_05165
NZ_CP116044.1	Protein Homology	CDS	1080224	1081561	.	+	0	ID=cds-WP_001279404.1;Parent=gene-PHA55_RS05165;Dbxref=Genbank:WP_001279404.1;Name=WP_001279404.1;Ontology_term=GO:0030254,GO:0005524,GO:0016887;gbkey=CDS;gene=fliI;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001279390.1;locus_tag=PHA55_RS05165;product=flagellar protein export ATPase FliI;protein_id=WP_001279404.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1081564	1081998	.	+	.	ID=gene-PHA55_RS05170;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=PHA55_RS05170;old_locus_tag=PHA55_05170
NZ_CP116044.1	Protein Homology	CDS	1081564	1081998	.	+	0	ID=cds-WP_001248929.1;Parent=gene-PHA55_RS05170;Dbxref=Genbank:WP_001248929.1;Name=WP_001248929.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248915.1;locus_tag=PHA55_RS05170;product=flagellar export protein FliJ;protein_id=WP_001248929.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1082001	1082396	.	+	.	ID=gene-PHA55_RS05175;Name=PHA55_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05175;old_locus_tag=PHA55_05175
NZ_CP116044.1	Protein Homology	CDS	1082001	1082396	.	+	0	ID=cds-WP_000859525.1;Parent=gene-PHA55_RS05175;Dbxref=Genbank:WP_000859525.1;Name=WP_000859525.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001637450.1;locus_tag=PHA55_RS05175;product=adenylyltransferase/cytidyltransferase family protein;protein_id=WP_000859525.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1082514	1084958	.	-	.	ID=gene-PHA55_RS05180;Name=PHA55_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05180;old_locus_tag=PHA55_05180
NZ_CP116044.1	Protein Homology	CDS	1082514	1084958	.	-	0	ID=cds-WP_038995896.1;Parent=gene-PHA55_RS05180;Dbxref=Genbank:WP_038995896.1;Name=WP_038995896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001412594.1;locus_tag=PHA55_RS05180;product=glycosyltransferase;protein_id=WP_038995896.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1085137	1086066	.	-	.	ID=gene-PHA55_RS05185;Name=PHA55_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05185;old_locus_tag=PHA55_05185
NZ_CP116044.1	Protein Homology	CDS	1085137	1086066	.	-	0	ID=cds-WP_023140195.1;Parent=gene-PHA55_RS05185;Dbxref=Genbank:WP_023140195.1;Name=WP_023140195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000008086.1;locus_tag=PHA55_RS05185;product=hypothetical protein;protein_id=WP_023140195.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1086193	1086621	.	-	.	ID=gene-PHA55_RS05190;Name=PHA55_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05190;old_locus_tag=PHA55_05190
NZ_CP116044.1	Protein Homology	CDS	1086193	1086621	.	-	0	ID=cds-WP_023569000.1;Parent=gene-PHA55_RS05190;Dbxref=Genbank:WP_023569000.1;Name=WP_023569000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001329715.1;locus_tag=PHA55_RS05190;product=flagellar protein FlgN;protein_id=WP_023569000.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1086634	1086912	.	-	.	ID=gene-PHA55_RS05195;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=PHA55_RS05195;old_locus_tag=PHA55_05195
NZ_CP116044.1	Protein Homology	CDS	1086634	1086912	.	-	0	ID=cds-WP_000705394.1;Parent=gene-PHA55_RS05195;Dbxref=Genbank:WP_000705394.1;Name=WP_000705394.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000705216.1;locus_tag=PHA55_RS05195;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_000705394.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1086993	1087730	.	-	.	ID=gene-PHA55_RS05200;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=PHA55_RS05200;old_locus_tag=PHA55_05200
NZ_CP116044.1	Protein Homology	CDS	1086993	1087730	.	-	0	ID=cds-WP_000009751.1;Parent=gene-PHA55_RS05200;Dbxref=Genbank:WP_000009751.1;Name=WP_000009751.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233868.1;locus_tag=PHA55_RS05200;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_000009751.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1087812	1088147	.	+	.	ID=gene-PHA55_RS05205;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=PHA55_RS05205;old_locus_tag=PHA55_05205
NZ_CP116044.1	Protein Homology	CDS	1087812	1088147	.	+	0	ID=cds-WP_000512950.1;Parent=gene-PHA55_RS05205;Dbxref=Genbank:WP_000512950.1;Name=WP_000512950.1;Note=with FlgF and C makes up the proximal portion of the flagellar basal body rod%3B Yersinia has 2 copies of flgB and other flagellar genes;gbkey=CDS;gene=flgB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211435.1;locus_tag=PHA55_RS05205;product=flagellar biosynthesis protein FlgB;protein_id=WP_000512950.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1088150	1088581	.	+	.	ID=gene-PHA55_RS05210;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=PHA55_RS05210;old_locus_tag=PHA55_05210
NZ_CP116044.1	Protein Homology	CDS	1088150	1088581	.	+	0	ID=cds-WP_000010950.1;Parent=gene-PHA55_RS05210;Dbxref=Genbank:WP_000010950.1;Name=WP_000010950.1;Ontology_term=GO:0001539,GO:0005198,GO:0009425;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body|0009425||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000010944.1;locus_tag=PHA55_RS05210;product=flagellar basal body rod protein FlgC;protein_id=WP_000010950.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1088581	1089294	.	+	.	ID=gene-PHA55_RS05215;Name=PHA55_RS05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05215;old_locus_tag=PHA55_05215
NZ_CP116044.1	Protein Homology	CDS	1088581	1089294	.	+	0	ID=cds-WP_001093673.1;Parent=gene-PHA55_RS05215;Dbxref=Genbank:WP_001093673.1;Name=WP_001093673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001508388.1;locus_tag=PHA55_RS05215;product=flagellar hook capping FlgD N-terminal domain-containing protein;protein_id=WP_001093673.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1089379	1090581	.	+	.	ID=gene-PHA55_RS05220;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=PHA55_RS05220;old_locus_tag=PHA55_05220
NZ_CP116044.1	Protein Homology	CDS	1089379	1090581	.	+	0	ID=cds-WP_000119531.1;Parent=gene-PHA55_RS05220;Dbxref=Genbank:WP_000119531.1;Name=WP_000119531.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904671.1;locus_tag=PHA55_RS05220;product=flagellar hook protein FlgE;protein_id=WP_000119531.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1090581	1091318	.	+	.	ID=gene-PHA55_RS05225;Name=PHA55_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05225;old_locus_tag=PHA55_05225
NZ_CP116044.1	Protein Homology	CDS	1090581	1091318	.	+	0	ID=cds-WP_000375456.1;Parent=gene-PHA55_RS05225;Dbxref=Genbank:WP_000375456.1;Name=WP_000375456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375458.1;locus_tag=PHA55_RS05225;product=flagellar basal body rod protein FlgF;protein_id=WP_000375456.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1091497	1092282	.	+	.	ID=gene-PHA55_RS05230;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=PHA55_RS05230;old_locus_tag=PHA55_05230
NZ_CP116044.1	Protein Homology	CDS	1091497	1092282	.	+	0	ID=cds-WP_000990540.1;Parent=gene-PHA55_RS05230;Dbxref=Genbank:WP_000990540.1;Name=WP_000990540.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003838810.1;locus_tag=PHA55_RS05230;product=flagellar basal-body rod protein FlgG;protein_id=WP_000990540.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1092554	1093219	.	+	.	ID=gene-PHA55_RS05235;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=PHA55_RS05235;old_locus_tag=PHA55_05235
NZ_CP116044.1	Protein Homology	CDS	1092554	1093219	.	+	0	ID=cds-WP_000800868.1;Parent=gene-PHA55_RS05235;Dbxref=Genbank:WP_000800868.1;Name=WP_000800868.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211429.1;locus_tag=PHA55_RS05235;product=flagellar basal body L-ring protein FlgH;protein_id=WP_000800868.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1093234	1094334	.	+	.	ID=gene-PHA55_RS05240;Name=PHA55_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05240;old_locus_tag=PHA55_05240
NZ_CP116044.1	Protein Homology	CDS	1093234	1094334	.	+	0	ID=cds-WP_038995902.1;Parent=gene-PHA55_RS05240;Dbxref=Genbank:WP_038995902.1;Name=WP_038995902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001181884.1;locus_tag=PHA55_RS05240;product=flagellar basal body P-ring protein FlgI;protein_id=WP_038995902.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1094334	1094633	.	+	.	ID=gene-PHA55_RS05245;Name=PHA55_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05245;old_locus_tag=PHA55_05245
NZ_CP116044.1	Protein Homology	CDS	1094334	1094633	.	+	0	ID=cds-WP_000772687.1;Parent=gene-PHA55_RS05245;Dbxref=Genbank:WP_000772687.1;Name=WP_000772687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000867283.1;locus_tag=PHA55_RS05245;product=rod-binding protein;protein_id=WP_000772687.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1094822	1096198	.	+	.	ID=gene-PHA55_RS05250;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=PHA55_RS05250;old_locus_tag=PHA55_05250
NZ_CP116044.1	Protein Homology	CDS	1094822	1096198	.	+	0	ID=cds-WP_271287502.1;Parent=gene-PHA55_RS05250;Dbxref=Genbank:WP_271287502.1;Name=WP_271287502.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000367241.1;locus_tag=PHA55_RS05250;product=flagellar hook-associated protein FlgK;protein_id=WP_271287502.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1096213	1097142	.	+	.	ID=gene-PHA55_RS05255;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=PHA55_RS05255;old_locus_tag=PHA55_05255
NZ_CP116044.1	Protein Homology	CDS	1096213	1097142	.	+	0	ID=cds-WP_001752085.1;Parent=gene-PHA55_RS05255;Dbxref=Genbank:WP_001752085.1;Name=WP_001752085.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219239.1;locus_tag=PHA55_RS05255;product=flagellar hook-associated protein FlgL;protein_id=WP_001752085.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1097159	1098136	.	+	.	ID=gene-PHA55_RS05260;Name=PHA55_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05260;old_locus_tag=PHA55_05260
NZ_CP116044.1	Protein Homology	CDS	1097159	1098136	.	+	0	ID=cds-WP_023569004.1;Parent=gene-PHA55_RS05260;Dbxref=Genbank:WP_023569004.1;Name=WP_023569004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001195949.1;locus_tag=PHA55_RS05260;product=hypothetical protein;protein_id=WP_023569004.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1098191	1099033	.	-	.	ID=gene-PHA55_RS05265;Name=PHA55_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05265;old_locus_tag=PHA55_05265
NZ_CP116044.1	Protein Homology	CDS	1098191	1099033	.	-	0	ID=cds-WP_038995905.1;Parent=gene-PHA55_RS05265;Dbxref=Genbank:WP_038995905.1;Name=WP_038995905.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000022370.1;locus_tag=PHA55_RS05265;product=winged helix-turn-helix domain-containing protein;protein_id=WP_038995905.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	1099519	1099854	.	+	.	ID=gene-PHA55_RS05270;Name=PHA55_RS05270;end_range=1099854,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS05270;old_locus_tag=PHA55_05270;partial=true;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	1099519	1099854	.	+	0	ID=cds-PHA55_RS05270;Parent=gene-PHA55_RS05270;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1099854,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012874.2;locus_tag=PHA55_RS05270;partial=true;product=lateral flagellin LafA;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	1099831	1100706	.	+	.	ID=gene-PHA55_RS05275;Name=PHA55_RS05275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS05275;old_locus_tag=PHA55_05275;partial=true;pseudo=true;start_range=.,1099831
NZ_CP116044.1	Protein Homology	CDS	1099831	1100706	.	+	0	ID=cds-PHA55_RS05275;Parent=gene-PHA55_RS05275;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001067462.1;locus_tag=PHA55_RS05275;partial=true;product=flagellar hook-length control protein FliK;pseudo=true;start_range=.,1099831;transl_table=11
NZ_CP116044.1	RefSeq	gene	1100714	1101181	.	+	.	ID=gene-PHA55_RS05280;Name=PHA55_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05280;old_locus_tag=PHA55_05280
NZ_CP116044.1	Protein Homology	CDS	1100714	1101181	.	+	0	ID=cds-WP_000725257.1;Parent=gene-PHA55_RS05280;Dbxref=Genbank:WP_000725257.1;Name=WP_000725257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521900.1;locus_tag=PHA55_RS05280;product=flagellar basal body-associated FliL family protein;protein_id=WP_000725257.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1101201	1101917	.	+	.	ID=gene-PHA55_RS05285;Name=PHA55_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05285;old_locus_tag=PHA55_05285
NZ_CP116044.1	Protein Homology	CDS	1101201	1101917	.	+	0	ID=cds-WP_000938725.1;Parent=gene-PHA55_RS05285;Dbxref=Genbank:WP_000938725.1;Name=WP_000938725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000938732.1;locus_tag=PHA55_RS05285;product=FliA/WhiG family RNA polymerase sigma factor;protein_id=WP_000938725.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1101930	1102793	.	+	.	ID=gene-PHA55_RS05290;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=PHA55_RS05290;old_locus_tag=PHA55_05290
NZ_CP116044.1	Protein Homology	CDS	1101930	1102793	.	+	0	ID=cds-WP_001169518.1;Parent=gene-PHA55_RS05290;Dbxref=Genbank:WP_001169518.1;Name=WP_001169518.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001169515.1;locus_tag=PHA55_RS05290;product=flagellar motor stator protein MotA;protein_id=WP_001169518.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1102796	1103719	.	+	.	ID=gene-PHA55_RS05295;Name=lafU;gbkey=Gene;gene=lafU;gene_biotype=protein_coding;locus_tag=PHA55_RS05295;old_locus_tag=PHA55_05295
NZ_CP116044.1	Protein Homology	CDS	1102796	1103719	.	+	0	ID=cds-WP_001597635.1;Parent=gene-PHA55_RS05295;Dbxref=Genbank:WP_001597635.1;Name=WP_001597635.1;gbkey=CDS;gene=lafU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521902.1;locus_tag=PHA55_RS05295;product=putative lateral flagellar export/assembly protein LafU;protein_id=WP_001597635.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1103790	1104845	.	+	.	ID=gene-PHA55_RS05300;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=PHA55_RS05300;old_locus_tag=PHA55_05300
NZ_CP116044.1	Protein Homology	CDS	1103790	1104845	.	+	0	ID=cds-WP_001226164.1;Parent=gene-PHA55_RS05300;Dbxref=Genbank:WP_001226164.1;Name=WP_001226164.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414766.1;locus_tag=PHA55_RS05300;product=DNA polymerase IV;protein_id=WP_001226164.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1104842	1105294	.	+	.	ID=gene-PHA55_RS05305;Name=yafP;gbkey=Gene;gene=yafP;gene_biotype=protein_coding;locus_tag=PHA55_RS05305;old_locus_tag=PHA55_05305
NZ_CP116044.1	Protein Homology	CDS	1104842	1105294	.	+	0	ID=cds-WP_001059855.1;Parent=gene-PHA55_RS05305;Dbxref=Genbank:WP_001059855.1;Name=WP_001059855.1;gbkey=CDS;gene=yafP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706234.1;locus_tag=PHA55_RS05305;product=GNAT family N-acetyltransferase;protein_id=WP_001059855.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1105540	1106679	.	+	.	ID=gene-PHA55_RS05310;Name=PHA55_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05310;old_locus_tag=PHA55_05310
NZ_CP116044.1	Protein Homology	CDS	1105540	1106679	.	+	0	ID=cds-WP_000528869.1;Parent=gene-PHA55_RS05310;Dbxref=Genbank:WP_000528869.1;Name=WP_000528869.1;Ontology_term=GO:0006396,GO:0008452;gbkey=CDS;go_function=RNA ligase activity|0008452||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000521550.1;locus_tag=PHA55_RS05310;product=RNA ligase RtcB family protein;protein_id=WP_000528869.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1106676	1107290	.	+	.	ID=gene-PHA55_RS05315;Name=prfH;gbkey=Gene;gene=prfH;gene_biotype=protein_coding;locus_tag=PHA55_RS05315;old_locus_tag=PHA55_05315
NZ_CP116044.1	Protein Homology	CDS	1106676	1107290	.	+	0	ID=cds-WP_000602112.1;Parent=gene-PHA55_RS05315;Dbxref=Genbank:WP_000602112.1;Name=WP_000602112.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfH;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000602105.1;locus_tag=PHA55_RS05315;product=peptide chain release factor H;protein_id=WP_000602112.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1107347	1108804	.	-	.	ID=gene-PHA55_RS05320;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=PHA55_RS05320;old_locus_tag=PHA55_05320
NZ_CP116044.1	Protein Homology	CDS	1107347	1108804	.	-	0	ID=cds-WP_001293016.1;Parent=gene-PHA55_RS05320;Dbxref=Genbank:WP_001293016.1;Name=WP_001293016.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308291.1;locus_tag=PHA55_RS05320;product=cytosol nonspecific dipeptidase;protein_id=WP_001293016.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1109065	1109523	.	+	.	ID=gene-PHA55_RS05325;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=PHA55_RS05325;old_locus_tag=PHA55_05325
NZ_CP116044.1	Protein Homology	CDS	1109065	1109523	.	+	0	ID=cds-WP_001402049.1;Parent=gene-PHA55_RS05325;Dbxref=Genbank:WP_001402049.1;Name=WP_001402049.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308292.1;locus_tag=PHA55_RS05325;product=xanthine phosphoribosyltransferase;protein_id=WP_001402049.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1109615	1110859	.	+	.	ID=gene-PHA55_RS05330;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=PHA55_RS05330;old_locus_tag=PHA55_05330
NZ_CP116044.1	Protein Homology	CDS	1109615	1110859	.	+	0	ID=cds-WP_000189539.1;Parent=gene-PHA55_RS05330;Dbxref=Genbank:WP_000189539.1;Name=WP_000189539.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706239.1;locus_tag=PHA55_RS05330;product=esterase FrsA;protein_id=WP_000189539.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1110917	1111318	.	+	.	ID=gene-PHA55_RS05335;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=PHA55_RS05335;old_locus_tag=PHA55_05335
NZ_CP116044.1	Protein Homology	CDS	1110917	1111318	.	+	0	ID=cds-WP_000174677.1;Parent=gene-PHA55_RS05335;Dbxref=Genbank:WP_000174677.1;Name=WP_000174677.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308294.1;locus_tag=PHA55_RS05335;product=sigma factor-binding protein Crl;protein_id=WP_000174677.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1111357	1112412	.	-	.	ID=gene-PHA55_RS05340;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=protein_coding;locus_tag=PHA55_RS05340;old_locus_tag=PHA55_05340
NZ_CP116044.1	Protein Homology	CDS	1111357	1112412	.	-	0	ID=cds-WP_000749881.1;Parent=gene-PHA55_RS05340;Dbxref=Genbank:WP_000749881.1;Name=WP_000749881.1;Ontology_term=GO:0034220,GO:0015288,GO:0016020;gbkey=CDS;gene=phoE;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308295.1;locus_tag=PHA55_RS05340;product=phosphoporin PhoE;protein_id=WP_000749881.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1112700	1113803	.	+	.	ID=gene-PHA55_RS05345;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=PHA55_RS05345;old_locus_tag=PHA55_05345
NZ_CP116044.1	Protein Homology	CDS	1112700	1113803	.	+	0	ID=cds-WP_001285288.1;Parent=gene-PHA55_RS05345;Dbxref=Genbank:WP_001285288.1;Name=WP_001285288.1;Ontology_term=GO:0006561,GO:0004349;gbkey=CDS;gene=proB;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308296.1;locus_tag=PHA55_RS05345;product=glutamate 5-kinase;protein_id=WP_001285288.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1113815	1115068	.	+	.	ID=gene-PHA55_RS05350;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=PHA55_RS05350;old_locus_tag=PHA55_05350
NZ_CP116044.1	Protein Homology	CDS	1113815	1115068	.	+	0	ID=cds-WP_000893255.1;Parent=gene-PHA55_RS05350;Dbxref=Genbank:WP_000893255.1;Name=WP_000893255.1;Ontology_term=GO:0006561,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414778.1;locus_tag=PHA55_RS05350;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_000893255.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1115183	1115258	.	+	.	ID=gene-PHA55_RS05355;Name=PHA55_RS05355;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS05355;old_locus_tag=PHA55_05355
NZ_CP116044.1	tRNAscan-SE	tRNA	1115183	1115258	.	+	.	ID=rna-PHA55_RS05355;Parent=gene-PHA55_RS05355;anticodon=(pos:1115216..1115218);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS05355;product=tRNA-Thr
NZ_CP116044.1	tRNAscan-SE	exon	1115183	1115258	.	+	.	ID=exon-PHA55_RS05355-1;Parent=rna-PHA55_RS05355;anticodon=(pos:1115216..1115218);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS05355;product=tRNA-Thr
NZ_CP116044.1	RefSeq	gene	1115273	1116391	.	-	.	ID=gene-PHA55_RS05360;Name=PHA55_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05360;old_locus_tag=PHA55_05360
NZ_CP116044.1	Protein Homology	CDS	1115273	1116391	.	-	0	ID=cds-WP_001132557.1;Parent=gene-PHA55_RS05360;Dbxref=Genbank:WP_001132557.1;Name=WP_001132557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706266.1;locus_tag=PHA55_RS05360;product=tyrosine-type recombinase/integrase;protein_id=WP_001132557.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1116313	1116747	.	-	.	ID=gene-PHA55_RS05365;Name=PHA55_RS05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05365;old_locus_tag=PHA55_05365
NZ_CP116044.1	Protein Homology	CDS	1116313	1116747	.	-	0	ID=cds-WP_077873866.1;Parent=gene-PHA55_RS05365;Dbxref=Genbank:WP_077873866.1;Name=WP_077873866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518805.1;locus_tag=PHA55_RS05365;product=helix-turn-helix domain-containing protein;protein_id=WP_077873866.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1116663	1116968	.	-	.	ID=gene-PHA55_RS05370;Name=yfdT;gbkey=Gene;gene=yfdT;gene_biotype=protein_coding;locus_tag=PHA55_RS05370;old_locus_tag=PHA55_05370
NZ_CP116044.1	Protein Homology	CDS	1116663	1116968	.	-	0	ID=cds-WP_000206732.1;Parent=gene-PHA55_RS05370;Dbxref=Genbank:WP_000206732.1;Name=WP_000206732.1;gbkey=CDS;gene=yfdT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706250.1;locus_tag=PHA55_RS05370;product=protein YfdT;protein_id=WP_000206732.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1116968	1117330	.	-	.	ID=gene-PHA55_RS05375;Name=PHA55_RS05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05375;old_locus_tag=PHA55_05375
NZ_CP116044.1	Protein Homology	CDS	1116968	1117330	.	-	0	ID=cds-WP_001242749.1;Parent=gene-PHA55_RS05375;Dbxref=Genbank:WP_001242749.1;Name=WP_001242749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416863.1;locus_tag=PHA55_RS05375;product=phage protein;protein_id=WP_001242749.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1117321	1117857	.	-	.	ID=gene-PHA55_RS05380;Name=yfdR;gbkey=Gene;gene=yfdR;gene_biotype=protein_coding;locus_tag=PHA55_RS05380;old_locus_tag=PHA55_05380
NZ_CP116044.1	Protein Homology	CDS	1117321	1117857	.	-	0	ID=cds-WP_000008200.1;Parent=gene-PHA55_RS05380;Dbxref=Genbank:WP_000008200.1;Name=WP_000008200.1;gbkey=CDS;gene=yfdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416862.2;locus_tag=PHA55_RS05380;product=5'-deoxynucleotidase;protein_id=WP_000008200.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1117985	1118809	.	-	.	ID=gene-PHA55_RS05385;Name=yfdQ;gbkey=Gene;gene=yfdQ;gene_biotype=protein_coding;locus_tag=PHA55_RS05385;old_locus_tag=PHA55_05385
NZ_CP116044.1	Protein Homology	CDS	1117985	1118809	.	-	0	ID=cds-WP_000081287.1;Parent=gene-PHA55_RS05385;Dbxref=Genbank:WP_000081287.1;Name=WP_000081287.1;gbkey=CDS;gene=yfdQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416861.1;locus_tag=PHA55_RS05385;product=DUF2303 family protein;protein_id=WP_000081287.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1118875	1119237	.	-	.	ID=gene-PHA55_RS05390;Name=yfdP;gbkey=Gene;gene=yfdP;gene_biotype=protein_coding;locus_tag=PHA55_RS05390;old_locus_tag=PHA55_05390
NZ_CP116044.1	Protein Homology	CDS	1118875	1119237	.	-	0	ID=cds-WP_059278896.1;Parent=gene-PHA55_RS05390;Dbxref=Genbank:WP_059278896.1;Name=WP_059278896.1;gbkey=CDS;gene=yfdP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000135678.1;locus_tag=PHA55_RS05390;product=protein YfdP;protein_id=WP_059278896.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	1119252	1119562	.	-	.	ID=gene-PHA55_RS05395;Name=PHA55_RS05395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS05395;old_locus_tag=PHA55_05395;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	1119252	1119562	.	-	0	ID=cds-PHA55_RS05395;Parent=gene-PHA55_RS05395;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518763.1;locus_tag=PHA55_RS05395;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	1119706	1120140	.	+	.	ID=gene-PHA55_RS05400;Name=PHA55_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05400;old_locus_tag=PHA55_05400
NZ_CP116044.1	Protein Homology	CDS	1119706	1120140	.	+	0	ID=cds-WP_000016389.1;Parent=gene-PHA55_RS05400;Dbxref=Genbank:WP_000016389.1;Name=WP_000016389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000016394.1;locus_tag=PHA55_RS05400;product=hypothetical protein;protein_id=WP_000016389.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1120112	1120318	.	-	.	ID=gene-PHA55_RS05405;Name=PHA55_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05405;old_locus_tag=PHA55_05405
NZ_CP116044.1	Protein Homology	CDS	1120112	1120318	.	-	0	ID=cds-WP_000549623.1;Parent=gene-PHA55_RS05405;Dbxref=Genbank:WP_000549623.1;Name=WP_000549623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000549622.1;locus_tag=PHA55_RS05405;product=hypothetical protein;protein_id=WP_000549623.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1120553	1121227	.	-	.	ID=gene-PHA55_RS05410;Name=ymfK;gbkey=Gene;gene=ymfK;gene_biotype=protein_coding;locus_tag=PHA55_RS05410;old_locus_tag=PHA55_05410
NZ_CP116044.1	Protein Homology	CDS	1120553	1121227	.	-	0	ID=cds-WP_000848748.1;Parent=gene-PHA55_RS05410;Dbxref=Genbank:WP_000848748.1;Name=WP_000848748.1;gbkey=CDS;gene=ymfK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415663.1;locus_tag=PHA55_RS05410;product=LexA family transcriptional repressor;protein_id=WP_000848748.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1121318	1121518	.	+	.	ID=gene-PHA55_RS05415;Name=ymfT;gbkey=Gene;gene=ymfT;gene_biotype=protein_coding;locus_tag=PHA55_RS05415;old_locus_tag=PHA55_05415
NZ_CP116044.1	Protein Homology	CDS	1121318	1121518	.	+	0	ID=cds-WP_000649477.1;Parent=gene-PHA55_RS05415;Dbxref=Genbank:WP_000649477.1;Name=WP_000649477.1;gbkey=CDS;gene=ymfT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415664.2;locus_tag=PHA55_RS05415;product=YdaS family helix-turn-helix protein;protein_id=WP_000649477.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1121562	1122113	.	+	.	ID=gene-PHA55_RS05420;Name=ymfL;gbkey=Gene;gene=ymfL;gene_biotype=protein_coding;locus_tag=PHA55_RS05420;old_locus_tag=PHA55_05420
NZ_CP116044.1	Protein Homology	CDS	1121562	1122113	.	+	0	ID=cds-WP_000515830.1;Parent=gene-PHA55_RS05420;Dbxref=Genbank:WP_000515830.1;Name=WP_000515830.1;gbkey=CDS;gene=ymfL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415665.2;locus_tag=PHA55_RS05420;product=protein YmfL;protein_id=WP_000515830.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1122289	1122468	.	+	.	ID=gene-PHA55_RS05425;Name=PHA55_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05425;old_locus_tag=PHA55_05425
NZ_CP116044.1	Protein Homology	CDS	1122289	1122468	.	+	0	ID=cds-WP_023148278.1;Parent=gene-PHA55_RS05425;Dbxref=Genbank:WP_023148278.1;Name=WP_023148278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001761574.1;locus_tag=PHA55_RS05425;product=DUF4222 domain-containing protein;protein_id=WP_023148278.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1122458	1123399	.	+	.	ID=gene-PHA55_RS05430;Name=PHA55_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05430;old_locus_tag=PHA55_05430
NZ_CP116044.1	Protein Homology	CDS	1122458	1123399	.	+	0	ID=cds-WP_000104967.1;Parent=gene-PHA55_RS05430;Dbxref=Genbank:WP_000104967.1;Name=WP_000104967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000104949.1;locus_tag=PHA55_RS05430;product=helix-turn-helix domain-containing protein;protein_id=WP_000104967.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1123396	1123890	.	+	.	ID=gene-PHA55_RS05435;Name=PHA55_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05435;old_locus_tag=PHA55_05435
NZ_CP116044.1	Protein Homology	CDS	1123396	1123890	.	+	0	ID=cds-WP_001542656.1;Parent=gene-PHA55_RS05435;Dbxref=Genbank:WP_001542656.1;Name=WP_001542656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416858.1;locus_tag=PHA55_RS05435;product=PerC family transcriptional regulator;protein_id=WP_001542656.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1123890	1124216	.	+	.	ID=gene-PHA55_RS05440;Name=PHA55_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05440;old_locus_tag=PHA55_05440
NZ_CP116044.1	Protein Homology	CDS	1123890	1124216	.	+	0	ID=cds-WP_000210164.1-2;Parent=gene-PHA55_RS05440;Dbxref=Genbank:WP_000210164.1;Name=WP_000210164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003878599.1;locus_tag=PHA55_RS05440;product=LexA family transcriptional regulator;protein_id=WP_000210164.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1124213	1124602	.	+	.	ID=gene-PHA55_RS05445;Name=PHA55_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05445;old_locus_tag=PHA55_05445
NZ_CP116044.1	Protein Homology	CDS	1124213	1124602	.	+	0	ID=cds-WP_000767113.1;Parent=gene-PHA55_RS05445;Dbxref=Genbank:WP_000767113.1;Name=WP_000767113.1;Ontology_term=GO:0006281,GO:0006310,GO:0000287;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000767134.1;locus_tag=PHA55_RS05445;product=RusA family crossover junction endodeoxyribonuclease;protein_id=WP_000767113.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1124622	1125419	.	+	.	ID=gene-PHA55_RS05450;Name=PHA55_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05450;old_locus_tag=PHA55_05450
NZ_CP116044.1	Protein Homology	CDS	1124622	1125419	.	+	0	ID=cds-WP_001061398.1;Parent=gene-PHA55_RS05450;Dbxref=Genbank:WP_001061398.1;Name=WP_001061398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001061418.1;locus_tag=PHA55_RS05450;product=KilA-N domain-containing protein;protein_id=WP_001061398.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1125427	1126416	.	+	.	ID=gene-PHA55_RS05455;Name=PHA55_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05455;old_locus_tag=PHA55_05455
NZ_CP116044.1	Protein Homology	CDS	1125427	1126416	.	+	0	ID=cds-WP_001420253.1;Parent=gene-PHA55_RS05455;Dbxref=Genbank:WP_001420253.1;Name=WP_001420253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001764249.1;locus_tag=PHA55_RS05455;product=DUF968 domain-containing protein;protein_id=WP_001420253.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1126432	1126797	.	+	.	ID=gene-PHA55_RS05460;Name=PHA55_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05460;old_locus_tag=PHA55_05460
NZ_CP116044.1	Protein Homology	CDS	1126432	1126797	.	+	0	ID=cds-WP_077908626.1;Parent=gene-PHA55_RS05460;Dbxref=Genbank:WP_077908626.1;Name=WP_077908626.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461182.1;locus_tag=PHA55_RS05460;product=antiterminator Q family protein;protein_id=WP_077908626.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1126810	1127673	.	-	.	ID=gene-PHA55_RS05465;Name=PHA55_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05465;old_locus_tag=PHA55_05465
NZ_CP116044.1	Protein Homology	CDS	1126810	1127673	.	-	0	ID=cds-WP_000750482.1;Parent=gene-PHA55_RS05465;Dbxref=Genbank:WP_000750482.1;Name=WP_000750482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000750482.1;locus_tag=PHA55_RS05465;product=NYN domain-containing protein;protein_id=WP_000750482.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1128074	1128277	.	+	.	ID=gene-PHA55_RS05470;Name=PHA55_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05470;old_locus_tag=PHA55_05470
NZ_CP116044.1	Protein Homology	CDS	1128074	1128277	.	+	0	ID=cds-WP_000917730.1;Parent=gene-PHA55_RS05470;Dbxref=Genbank:WP_000917730.1;Name=WP_000917730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000917730.1;locus_tag=PHA55_RS05470;product=hypothetical protein;protein_id=WP_000917730.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1128428	1129480	.	+	.	ID=gene-PHA55_RS05475;Name=PHA55_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05475;old_locus_tag=PHA55_05475
NZ_CP116044.1	Protein Homology	CDS	1128428	1129480	.	+	0	ID=cds-WP_000799659.1;Parent=gene-PHA55_RS05475;Dbxref=Genbank:WP_000799659.1;Name=WP_000799659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000799668.1;locus_tag=PHA55_RS05475;product=site-specific DNA-methyltransferase;protein_id=WP_000799659.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1129557	1129883	.	+	.	ID=gene-PHA55_RS05480;Name=PHA55_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05480;old_locus_tag=PHA55_05480
NZ_CP116044.1	Protein Homology	CDS	1129557	1129883	.	+	0	ID=cds-WP_001532222.1;Parent=gene-PHA55_RS05480;Dbxref=Genbank:WP_001532222.1;Name=WP_001532222.1;Ontology_term=GO:0019835;gbkey=CDS;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001120497.1;locus_tag=PHA55_RS05480;product=phage holin%2C lambda family;protein_id=WP_001532222.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1129887	1130363	.	+	.	ID=gene-PHA55_RS05485;Name=PHA55_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05485;old_locus_tag=PHA55_05485
NZ_CP116044.1	Protein Homology	CDS	1129887	1130363	.	+	0	ID=cds-WP_001148538.1;Parent=gene-PHA55_RS05485;Dbxref=Genbank:WP_001148538.1;Name=WP_001148538.1;Ontology_term=GO:0009253,GO:0016998,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309649.1;locus_tag=PHA55_RS05485;product=glycoside hydrolase family protein;protein_id=WP_001148538.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1130347	1130739	.	+	.	ID=gene-PHA55_RS05490;Name=PHA55_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05490;old_locus_tag=PHA55_05490
NZ_CP116044.1	Protein Homology	CDS	1130347	1130739	.	+	0	ID=cds-WP_001356320.1;Parent=gene-PHA55_RS05490;Dbxref=Genbank:WP_001356320.1;Name=WP_001356320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356320.1;locus_tag=PHA55_RS05490;product=DUF2570 domain-containing protein;protein_id=WP_001356320.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1130624	1130881	.	+	.	ID=gene-PHA55_RS05495;Name=PHA55_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05495;old_locus_tag=PHA55_05495
NZ_CP116044.1	Protein Homology	CDS	1130624	1130881	.	+	0	ID=cds-WP_122986267.1;Parent=gene-PHA55_RS05495;Dbxref=Genbank:WP_122986267.1;Name=WP_122986267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017898846.1;locus_tag=PHA55_RS05495;product=peptidase;protein_id=WP_122986267.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1130903	1131472	.	-	.	ID=gene-PHA55_RS05500;Name=PHA55_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05500;old_locus_tag=PHA55_05500
NZ_CP116044.1	Protein Homology	CDS	1130903	1131472	.	-	0	ID=cds-WP_000613842.1;Parent=gene-PHA55_RS05500;Dbxref=Genbank:WP_000613842.1;Name=WP_000613842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000613837.1;locus_tag=PHA55_RS05500;product=hypothetical protein;protein_id=WP_000613842.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1131573	1131908	.	-	.	ID=gene-PHA55_RS05505;Name=PHA55_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05505;old_locus_tag=PHA55_05505
NZ_CP116044.1	Protein Homology	CDS	1131573	1131908	.	-	0	ID=cds-WP_001089763.1;Parent=gene-PHA55_RS05505;Dbxref=Genbank:WP_001089763.1;Name=WP_001089763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001505012.1;locus_tag=PHA55_RS05505;product=hypothetical protein;protein_id=WP_001089763.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1132059	1132409	.	+	.	ID=gene-PHA55_RS05510;Name=PHA55_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05510;old_locus_tag=PHA55_05510
NZ_CP116044.1	Protein Homology	CDS	1132059	1132409	.	+	0	ID=cds-WP_001131133.1;Parent=gene-PHA55_RS05510;Dbxref=Genbank:WP_001131133.1;Name=WP_001131133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001135225.1;locus_tag=PHA55_RS05510;product=HNH endonuclease;protein_id=WP_001131133.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1132535	1133029	.	+	.	ID=gene-PHA55_RS05515;Name=PHA55_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05515;old_locus_tag=PHA55_05515
NZ_CP116044.1	Protein Homology	CDS	1132535	1133029	.	+	0	ID=cds-WP_000929175.1;Parent=gene-PHA55_RS05515;Dbxref=Genbank:WP_000929175.1;Name=WP_000929175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016249564.1;locus_tag=PHA55_RS05515;product=phage terminase small subunit P27 family;protein_id=WP_000929175.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1133026	1134759	.	+	.	ID=gene-PHA55_RS05520;Name=PHA55_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05520;old_locus_tag=PHA55_05520
NZ_CP116044.1	Protein Homology	CDS	1133026	1134759	.	+	0	ID=cds-WP_089643941.1;Parent=gene-PHA55_RS05520;Dbxref=Genbank:WP_089643941.1;Name=WP_089643941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000088170.1;locus_tag=PHA55_RS05520;product=terminase large subunit;protein_id=WP_089643941.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1134771	1134953	.	+	.	ID=gene-PHA55_RS05525;Name=ymfR;gbkey=Gene;gene=ymfR;gene_biotype=protein_coding;locus_tag=PHA55_RS05525;old_locus_tag=PHA55_05525
NZ_CP116044.1	Protein Homology	CDS	1134771	1134953	.	+	0	ID=cds-WP_000605606.1;Parent=gene-PHA55_RS05525;Dbxref=Genbank:WP_000605606.1;Name=WP_000605606.1;gbkey=CDS;gene=ymfR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415668.1;locus_tag=PHA55_RS05525;product=protein YmfR;protein_id=WP_000605606.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1134953	1136194	.	+	.	ID=gene-PHA55_RS05530;Name=PHA55_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05530;old_locus_tag=PHA55_05530
NZ_CP116044.1	Protein Homology	CDS	1134953	1136194	.	+	0	ID=cds-WP_000466255.1;Parent=gene-PHA55_RS05530;Dbxref=Genbank:WP_000466255.1;Name=WP_000466255.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000466237.1;locus_tag=PHA55_RS05530;product=phage portal protein;protein_id=WP_000466255.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1136172	1136822	.	+	.	ID=gene-PHA55_RS05535;Name=PHA55_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05535;old_locus_tag=PHA55_05535
NZ_CP116044.1	Protein Homology	CDS	1136172	1136822	.	+	0	ID=cds-WP_001193633.1;Parent=gene-PHA55_RS05535;Dbxref=Genbank:WP_001193633.1;Name=WP_001193633.1;Ontology_term=GO:0019068,GO:0005198,GO:0008233,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA,peptidase activity|0008233||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001193639.1;locus_tag=PHA55_RS05535;product=HK97 family phage prohead protease;protein_id=WP_001193633.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1136837	1138042	.	+	.	ID=gene-PHA55_RS05540;Name=PHA55_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05540;old_locus_tag=PHA55_05540
NZ_CP116044.1	Protein Homology	CDS	1136837	1138042	.	+	0	ID=cds-WP_000257497.1;Parent=gene-PHA55_RS05540;Dbxref=Genbank:WP_000257497.1;Name=WP_000257497.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559678.1;locus_tag=PHA55_RS05540;product=phage major capsid protein;protein_id=WP_000257497.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1138092	1138292	.	+	.	ID=gene-PHA55_RS05545;Name=PHA55_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05545;old_locus_tag=PHA55_05545
NZ_CP116044.1	Protein Homology	CDS	1138092	1138292	.	+	0	ID=cds-WP_000601364.1;Parent=gene-PHA55_RS05545;Dbxref=Genbank:WP_000601364.1;Name=WP_000601364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000601364.1;locus_tag=PHA55_RS05545;product=hypothetical protein;protein_id=WP_000601364.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1138295	1138618	.	+	.	ID=gene-PHA55_RS05550;Name=PHA55_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05550;old_locus_tag=PHA55_05550
NZ_CP116044.1	Protein Homology	CDS	1138295	1138618	.	+	0	ID=cds-WP_000927707.1;Parent=gene-PHA55_RS05550;Dbxref=Genbank:WP_000927707.1;Name=WP_000927707.1;Ontology_term=GO:0016032;gbkey=CDS;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001492759.1;locus_tag=PHA55_RS05550;product=head-tail connector protein;protein_id=WP_000927707.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1138615	1139025	.	+	.	ID=gene-PHA55_RS05555;Name=PHA55_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05555;old_locus_tag=PHA55_05555
NZ_CP116044.1	Protein Homology	CDS	1138615	1139025	.	+	0	ID=cds-WP_001519511.1;Parent=gene-PHA55_RS05555;Dbxref=Genbank:WP_001519511.1;Name=WP_001519511.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000702387.1;locus_tag=PHA55_RS05555;product=phage head closure protein;protein_id=WP_001519511.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1139000	1139506	.	+	.	ID=gene-PHA55_RS05560;Name=PHA55_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05560;old_locus_tag=PHA55_05560
NZ_CP116044.1	Protein Homology	CDS	1139000	1139506	.	+	0	ID=cds-WP_000213502.1;Parent=gene-PHA55_RS05560;Dbxref=Genbank:WP_000213502.1;Name=WP_000213502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001501060.1;locus_tag=PHA55_RS05560;product=hypothetical protein;protein_id=WP_000213502.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1139503	1140063	.	+	.	ID=gene-PHA55_RS05565;Name=PHA55_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05565;old_locus_tag=PHA55_05565
NZ_CP116044.1	Protein Homology	CDS	1139503	1140063	.	+	0	ID=cds-WP_000779279.1;Parent=gene-PHA55_RS05565;Dbxref=Genbank:WP_000779279.1;Name=WP_000779279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244984.1;locus_tag=PHA55_RS05565;product=hypothetical protein;protein_id=WP_000779279.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1140072	1140242	.	+	.	ID=gene-PHA55_RS05570;Name=PHA55_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05570;old_locus_tag=PHA55_05570
NZ_CP116044.1	Protein Homology	CDS	1140072	1140242	.	+	0	ID=cds-WP_000497751.1;Parent=gene-PHA55_RS05570;Dbxref=Genbank:WP_000497751.1;Name=WP_000497751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000497758.1;locus_tag=PHA55_RS05570;product=DUF2635 domain-containing protein;protein_id=WP_000497751.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1140226	1141722	.	+	.	ID=gene-PHA55_RS05575;Name=PHA55_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05575;old_locus_tag=PHA55_05575
NZ_CP116044.1	Protein Homology	CDS	1140226	1141722	.	+	0	ID=cds-WP_000155710.1;Parent=gene-PHA55_RS05575;Dbxref=Genbank:WP_000155710.1;Name=WP_000155710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707867.1;locus_tag=PHA55_RS05575;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_000155710.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1141722	1142078	.	+	.	ID=gene-PHA55_RS05580;Name=PHA55_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05580;old_locus_tag=PHA55_05580
NZ_CP116044.1	Protein Homology	CDS	1141722	1142078	.	+	0	ID=cds-WP_000090998.1;Parent=gene-PHA55_RS05580;Dbxref=Genbank:WP_000090998.1;Name=WP_000090998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707866.1;locus_tag=PHA55_RS05580;product=phage tail tube protein;protein_id=WP_000090998.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1142075	1142398	.	+	.	ID=gene-PHA55_RS05585;Name=PHA55_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05585;old_locus_tag=PHA55_05585
NZ_CP116044.1	Protein Homology	CDS	1142075	1142398	.	+	0	ID=cds-WP_000571713.1;Parent=gene-PHA55_RS05585;Dbxref=Genbank:WP_000571713.1;Name=WP_000571713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524108.1;locus_tag=PHA55_RS05585;product=phage tail assembly protein;protein_id=WP_000571713.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1142483	1144390	.	+	.	ID=gene-PHA55_RS05590;Name=PHA55_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05590;old_locus_tag=PHA55_05590
NZ_CP116044.1	Protein Homology	CDS	1142483	1144390	.	+	0	ID=cds-WP_000774664.1;Parent=gene-PHA55_RS05590;Dbxref=Genbank:WP_000774664.1;Name=WP_000774664.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000774670.1;locus_tag=PHA55_RS05590;product=phage tail tape measure protein;protein_id=WP_000774664.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1144415	1145791	.	+	.	ID=gene-PHA55_RS05595;Name=PHA55_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05595;old_locus_tag=PHA55_05595
NZ_CP116044.1	Protein Homology	CDS	1144415	1145791	.	+	0	ID=cds-WP_103743314.1;Parent=gene-PHA55_RS05595;Dbxref=Genbank:WP_103743314.1;Name=WP_103743314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001309364.1;locus_tag=PHA55_RS05595;product=DNA circularization N-terminal domain-containing protein;protein_id=WP_103743314.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1145788	1146867	.	+	.	ID=gene-PHA55_RS05600;Name=PHA55_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05600;old_locus_tag=PHA55_05600
NZ_CP116044.1	Protein Homology	CDS	1145788	1146867	.	+	0	ID=cds-WP_000999499.1;Parent=gene-PHA55_RS05600;Dbxref=Genbank:WP_000999499.1;Name=WP_000999499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559673.1;locus_tag=PHA55_RS05600;product=baseplate protein;protein_id=WP_000999499.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1146867	1147415	.	+	.	ID=gene-PHA55_RS05605;Name=PHA55_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05605;old_locus_tag=PHA55_05605
NZ_CP116044.1	Protein Homology	CDS	1146867	1147415	.	+	0	ID=cds-WP_001259088.1;Parent=gene-PHA55_RS05605;Dbxref=Genbank:WP_001259088.1;Name=WP_001259088.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364403.1;locus_tag=PHA55_RS05605;product=phage baseplate assembly protein V;protein_id=WP_001259088.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1147415	1147840	.	+	.	ID=gene-PHA55_RS05610;Name=PHA55_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05610;old_locus_tag=PHA55_05610
NZ_CP116044.1	Protein Homology	CDS	1147415	1147840	.	+	0	ID=cds-WP_000424732.1;Parent=gene-PHA55_RS05610;Dbxref=Genbank:WP_000424732.1;Name=WP_000424732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000424727.1;locus_tag=PHA55_RS05610;product=phage GP46 family protein;protein_id=WP_000424732.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1147827	1148885	.	+	.	ID=gene-PHA55_RS05615;Name=PHA55_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05615;old_locus_tag=PHA55_05615
NZ_CP116044.1	Protein Homology	CDS	1147827	1148885	.	+	0	ID=cds-WP_265739795.1;Parent=gene-PHA55_RS05615;Dbxref=Genbank:WP_265739795.1;Name=WP_265739795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536648.1;locus_tag=PHA55_RS05615;product=baseplate J/gp47 family protein;protein_id=WP_265739795.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1148876	1149460	.	+	.	ID=gene-PHA55_RS05620;Name=ymfQ;gbkey=Gene;gene=ymfQ;gene_biotype=protein_coding;locus_tag=PHA55_RS05620;old_locus_tag=PHA55_05620
NZ_CP116044.1	Protein Homology	CDS	1148876	1149460	.	+	0	ID=cds-WP_089585555.1;Parent=gene-PHA55_RS05620;Dbxref=Genbank:WP_089585555.1;Name=WP_089585555.1;gbkey=CDS;gene=ymfQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415671.1;locus_tag=PHA55_RS05620;product=YmfQ family protein;protein_id=WP_089585555.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1149464	1150249	.	+	.	ID=gene-PHA55_RS05625;Name=PHA55_RS05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05625;old_locus_tag=PHA55_05625
NZ_CP116044.1	Protein Homology	CDS	1149464	1150249	.	+	0	ID=cds-WP_271287503.1;Parent=gene-PHA55_RS05625;Dbxref=Genbank:WP_271287503.1;Name=WP_271287503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001494081.1;locus_tag=PHA55_RS05625;product=phage tail protein;protein_id=WP_271287503.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1150249	1150854	.	+	.	ID=gene-PHA55_RS05630;Name=tfaE;gbkey=Gene;gene=tfaE;gene_biotype=protein_coding;locus_tag=PHA55_RS05630;old_locus_tag=PHA55_05630
NZ_CP116044.1	Protein Homology	CDS	1150249	1150854	.	+	0	ID=cds-WP_271287504.1;Parent=gene-PHA55_RS05630;Dbxref=Genbank:WP_271287504.1;Name=WP_271287504.1;gbkey=CDS;gene=tfaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001578525.1;locus_tag=PHA55_RS05630;product=tail fiber assembly protein;protein_id=WP_271287504.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1150823	1151020	.	-	.	ID=gene-PHA55_RS05635;Name=PHA55_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05635;old_locus_tag=PHA55_05635
NZ_CP116044.1	Protein Homology	CDS	1150823	1151020	.	-	0	ID=cds-WP_059221482.1;Parent=gene-PHA55_RS05635;Dbxref=Genbank:WP_059221482.1;Name=WP_059221482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001440573.1;locus_tag=PHA55_RS05635;product=hypothetical protein;protein_id=WP_059221482.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1151007	1151390	.	-	.	ID=gene-PHA55_RS05640;Name=PHA55_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05640;old_locus_tag=PHA55_05640
NZ_CP116044.1	Protein Homology	CDS	1151007	1151390	.	-	0	ID=cds-WP_271287505.1;Parent=gene-PHA55_RS05640;Dbxref=Genbank:WP_271287505.1;Name=WP_271287505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001474027.1;locus_tag=PHA55_RS05640;product=hypothetical protein;protein_id=WP_271287505.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1151417	1151971	.	+	.	ID=gene-PHA55_RS05645;Name=pinE;gbkey=Gene;gene=pinE;gene_biotype=protein_coding;locus_tag=PHA55_RS05645;old_locus_tag=PHA55_05645
NZ_CP116044.1	Protein Homology	CDS	1151417	1151971	.	+	0	ID=cds-WP_000904983.1;Parent=gene-PHA55_RS05645;Dbxref=Genbank:WP_000904983.1;Name=WP_000904983.1;gbkey=CDS;gene=pinE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308311.1;locus_tag=PHA55_RS05645;product=site-specific DNA recombinase;protein_id=WP_000904983.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1152029	1152802	.	-	.	ID=gene-PHA55_RS05650;Name=PHA55_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05650;old_locus_tag=PHA55_05650
NZ_CP116044.1	Protein Homology	CDS	1152029	1152802	.	-	0	ID=cds-WP_000355484.1;Parent=gene-PHA55_RS05650;Dbxref=Genbank:WP_000355484.1;Name=WP_000355484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308312.1;locus_tag=PHA55_RS05650;product=hypothetical protein;protein_id=WP_000355484.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1153629	1154372	.	+	.	ID=gene-PHA55_RS05655;Name=PHA55_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05655;old_locus_tag=PHA55_05655
NZ_CP116044.1	Protein Homology	CDS	1153629	1154372	.	+	0	ID=cds-WP_057696252.1;Parent=gene-PHA55_RS05655;Dbxref=Genbank:WP_057696252.1;Name=WP_057696252.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308314.1;locus_tag=PHA55_RS05655;product=AraC family transcriptional regulator;protein_id=WP_057696252.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	1154414	1154623	.	-	.	ID=gene-PHA55_RS05660;Name=PHA55_RS05660;end_range=1154623,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS05660;old_locus_tag=PHA55_05660;partial=true;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	1154414	1154623	.	-	0	ID=cds-PHA55_RS05660;Parent=gene-PHA55_RS05660;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=1154623,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611134.1;locus_tag=PHA55_RS05660;partial=true;product=integrase core domain-containing protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	1155653	1158310	.	+	.	ID=gene-PHA55_RS05665;Name=PHA55_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05665;old_locus_tag=PHA55_05665
NZ_CP116044.1	Protein Homology	CDS	1155653	1158310	.	+	0	ID=cds-WP_271287506.1;Parent=gene-PHA55_RS05665;Dbxref=Genbank:WP_271287506.1;Name=WP_271287506.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017539.2;locus_tag=PHA55_RS05665;product=NACHT domain-containing protein;protein_id=WP_271287506.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1159591	1160753	.	+	.	ID=gene-PHA55_RS05670;Name=PHA55_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05670;old_locus_tag=PHA55_05670
NZ_CP116044.1	Protein Homology	CDS	1159591	1159852	.	+	0	ID=cds-WP_085947771.1;Parent=gene-PHA55_RS05670;Dbxref=Genbank:WP_085947771.1;Name=WP_085947771.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=PHA55_RS05670;product=IS3-like element IS3 family transposase;protein_id=WP_085947771.1;transl_table=11
NZ_CP116044.1	Protein Homology	CDS	1159852	1160753	.	+	2	ID=cds-WP_085947771.1;Parent=gene-PHA55_RS05670;Dbxref=Genbank:WP_085947771.1;Name=WP_085947771.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=PHA55_RS05670;product=IS3-like element IS3 family transposase;protein_id=WP_085947771.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1161242	1161499	.	-	.	ID=gene-PHA55_RS05675;Name=PHA55_RS05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05675;old_locus_tag=PHA55_05675
NZ_CP116044.1	Protein Homology	CDS	1161242	1161499	.	-	0	ID=cds-WP_061892098.1;Parent=gene-PHA55_RS05675;Dbxref=Genbank:WP_061892098.1;Name=WP_061892098.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965745.1;locus_tag=PHA55_RS05675;product=HigA family addiction module antitoxin;protein_id=WP_061892098.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1162219	1162488	.	+	.	ID=gene-PHA55_RS05680;Name=PHA55_RS05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05680;old_locus_tag=PHA55_05680
NZ_CP116044.1	Protein Homology	CDS	1162219	1162488	.	+	0	ID=cds-WP_061892099.1;Parent=gene-PHA55_RS05680;Dbxref=Genbank:WP_061892099.1;Name=WP_061892099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965744.1;locus_tag=PHA55_RS05680;product=hypothetical protein;protein_id=WP_061892099.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1162770	1163123	.	+	.	ID=gene-PHA55_RS05685;Name=traJ;gbkey=Gene;gene=traJ;gene_biotype=protein_coding;locus_tag=PHA55_RS05685;old_locus_tag=PHA55_05685
NZ_CP116044.1	Protein Homology	CDS	1162770	1163123	.	+	0	ID=cds-WP_001460377.1;Parent=gene-PHA55_RS05685;Dbxref=Genbank:WP_001460377.1;Name=WP_001460377.1;gbkey=CDS;gene=traJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575471.1;locus_tag=PHA55_RS05685;product=conjugal transfer transcriptional regulator TraJ;protein_id=WP_001460377.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1163205	1163999	.	+	.	ID=gene-PHA55_RS05690;Name=trbJ;gbkey=Gene;gene=trbJ;gene_biotype=protein_coding;locus_tag=PHA55_RS05690;old_locus_tag=PHA55_05690
NZ_CP116044.1	Protein Homology	CDS	1163205	1163999	.	+	0	ID=cds-WP_061892101.1;Parent=gene-PHA55_RS05690;Dbxref=Genbank:WP_061892101.1;Name=WP_061892101.1;gbkey=CDS;gene=trbJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724243.1;locus_tag=PHA55_RS05690;product=P-type conjugative transfer protein TrbJ;protein_id=WP_061892101.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1164011	1164184	.	+	.	ID=gene-PHA55_RS05695;Name=PHA55_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05695;old_locus_tag=PHA55_05695
NZ_CP116044.1	Protein Homology	CDS	1164011	1164184	.	+	0	ID=cds-WP_164559701.1;Parent=gene-PHA55_RS05695;Dbxref=Genbank:WP_164559701.1;Name=WP_164559701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965741.1;locus_tag=PHA55_RS05695;product=hypothetical protein;protein_id=WP_164559701.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1164187	1165581	.	+	.	ID=gene-PHA55_RS05700;Name=trbL;gbkey=Gene;gene=trbL;gene_biotype=protein_coding;locus_tag=PHA55_RS05700;old_locus_tag=PHA55_05700
NZ_CP116044.1	Protein Homology	CDS	1164187	1165581	.	+	0	ID=cds-WP_061892102.1;Parent=gene-PHA55_RS05700;Dbxref=Genbank:WP_061892102.1;Name=WP_061892102.1;Ontology_term=GO:0009291;gbkey=CDS;gene=trbL;go_process=unidirectional conjugation|0009291||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001471082.1;locus_tag=PHA55_RS05700;product=P-type conjugative transfer protein TrbL;protein_id=WP_061892102.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1165651	1165863	.	+	.	ID=gene-PHA55_RS05705;Name=PHA55_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05705;old_locus_tag=PHA55_05705
NZ_CP116044.1	Protein Homology	CDS	1165651	1165863	.	+	0	ID=cds-WP_001575475.1;Parent=gene-PHA55_RS05705;Dbxref=Genbank:WP_001575475.1;Name=WP_001575475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000796434.1;locus_tag=PHA55_RS05705;product=hypothetical protein;protein_id=WP_001575475.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1165884	1166111	.	-	.	ID=gene-PHA55_RS05710;Name=PHA55_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05710;old_locus_tag=PHA55_05710
NZ_CP116044.1	Protein Homology	CDS	1165884	1166111	.	-	0	ID=cds-WP_061892103.1;Parent=gene-PHA55_RS05710;Dbxref=Genbank:WP_061892103.1;Name=WP_061892103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965727.1;locus_tag=PHA55_RS05710;product=antitoxin VbhA family protein;protein_id=WP_061892103.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1166098	1166988	.	-	.	ID=gene-PHA55_RS05715;Name=PHA55_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05715;old_locus_tag=PHA55_05715
NZ_CP116044.1	Protein Homology	CDS	1166098	1166988	.	-	0	ID=cds-WP_061892104.1;Parent=gene-PHA55_RS05715;Dbxref=Genbank:WP_061892104.1;Name=WP_061892104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395310.1;locus_tag=PHA55_RS05715;product=hypothetical protein;protein_id=WP_061892104.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1166998	1168071	.	-	.	ID=gene-PHA55_RS05720;Name=PHA55_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05720;old_locus_tag=PHA55_05720
NZ_CP116044.1	Protein Homology	CDS	1166998	1168071	.	-	0	ID=cds-WP_061892105.1;Parent=gene-PHA55_RS05720;Dbxref=Genbank:WP_061892105.1;Name=WP_061892105.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016239453.1;locus_tag=PHA55_RS05720;product=site-specific integrase;protein_id=WP_061892105.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1168097	1168208	.	+	.	ID=gene-PHA55_RS05725;Name=PHA55_RS05725;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS05725;old_locus_tag=PHA55_05725
NZ_CP116044.1	tRNAscan-SE	tRNA	1168097	1168208	.	+	.	ID=rna-PHA55_RS05725;Parent=gene-PHA55_RS05725;anticodon=(pos:1168188..1168190);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS05725;product=tRNA-Ser
NZ_CP116044.1	tRNAscan-SE	exon	1168097	1168208	.	+	.	ID=exon-PHA55_RS05725-1;Parent=rna-PHA55_RS05725;anticodon=(pos:1168188..1168190);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS05725;product=tRNA-Ser
NZ_CP116044.1	RefSeq	pseudogene	1168335	1168673	.	-	.	ID=gene-PHA55_RS05730;Name=PHA55_RS05730;end_range=1168673,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS05730;old_locus_tag=PHA55_05730;partial=true;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	1168335	1168673	.	-	0	ID=cds-PHA55_RS05730;Parent=gene-PHA55_RS05730;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1168673,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014831000.1;locus_tag=PHA55_RS05730;partial=true;product=LysR substrate-binding domain-containing protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	1168724	1169680	.	-	.	ID=gene-PHA55_RS05735;Name=paoD;gbkey=Gene;gene=paoD;gene_biotype=protein_coding;locus_tag=PHA55_RS05735;old_locus_tag=PHA55_05735
NZ_CP116044.1	Protein Homology	CDS	1168724	1169680	.	-	0	ID=cds-WP_000121335.1;Parent=gene-PHA55_RS05735;Dbxref=Genbank:WP_000121335.1;Name=WP_000121335.1;gbkey=CDS;gene=paoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414817.1;locus_tag=PHA55_RS05735;product=molybdenum cofactor insertion chaperone PaoD;protein_id=WP_000121335.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1169690	1171888	.	-	.	ID=gene-PHA55_RS05740;Name=paoC;gbkey=Gene;gene=paoC;gene_biotype=protein_coding;locus_tag=PHA55_RS05740;old_locus_tag=PHA55_05740
NZ_CP116044.1	Protein Homology	CDS	1169690	1171888	.	-	0	ID=cds-WP_000667026.1;Parent=gene-PHA55_RS05740;Dbxref=Genbank:WP_000667026.1;Name=WP_000667026.1;gbkey=CDS;gene=paoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414818.1;locus_tag=PHA55_RS05740;product=aldehyde oxidoreductase molybdenum-binding subunit PaoC;protein_id=WP_000667026.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1171885	1172841	.	-	.	ID=gene-PHA55_RS05745;Name=paoB;gbkey=Gene;gene=paoB;gene_biotype=protein_coding;locus_tag=PHA55_RS05745;old_locus_tag=PHA55_05745
NZ_CP116044.1	Protein Homology	CDS	1171885	1172841	.	-	0	ID=cds-WP_000643328.1;Parent=gene-PHA55_RS05745;Dbxref=Genbank:WP_000643328.1;Name=WP_000643328.1;gbkey=CDS;gene=paoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414819.1;locus_tag=PHA55_RS05745;product=aldehyde oxidoreductase FAD-binding subunit PaoB;protein_id=WP_000643328.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1172838	1173527	.	-	.	ID=gene-PHA55_RS05750;Name=paoA;gbkey=Gene;gene=paoA;gene_biotype=protein_coding;locus_tag=PHA55_RS05750;old_locus_tag=PHA55_05750
NZ_CP116044.1	Protein Homology	CDS	1172838	1173527	.	-	0	ID=cds-WP_000070693.1;Parent=gene-PHA55_RS05750;Dbxref=Genbank:WP_000070693.1;Name=WP_000070693.1;Ontology_term=GO:0016491,GO:0046872,GO:0051536;gbkey=CDS;gene=paoA;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414820.1;locus_tag=PHA55_RS05750;product=aldehyde dehydrogenase iron-sulfur subunit;protein_id=WP_000070693.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1173945	1174559	.	+	.	ID=gene-PHA55_RS05755;Name=yagU;gbkey=Gene;gene=yagU;gene_biotype=protein_coding;locus_tag=PHA55_RS05755;old_locus_tag=PHA55_05755
NZ_CP116044.1	Protein Homology	CDS	1173945	1174559	.	+	0	ID=cds-WP_001019920.1;Parent=gene-PHA55_RS05755;Dbxref=Genbank:WP_001019920.1;Name=WP_001019920.1;gbkey=CDS;gene=yagU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308344.1;locus_tag=PHA55_RS05755;product=YagU family protein;protein_id=WP_001019920.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1174807	1175136	.	-	.	ID=gene-PHA55_RS05760;Name=ykgJ;gbkey=Gene;gene=ykgJ;gene_biotype=protein_coding;locus_tag=PHA55_RS05760;old_locus_tag=PHA55_05760
NZ_CP116044.1	Protein Homology	CDS	1174807	1175136	.	-	0	ID=cds-WP_001303809.1;Parent=gene-PHA55_RS05760;Dbxref=Genbank:WP_001303809.1;Name=WP_001303809.1;gbkey=CDS;gene=ykgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414822.1;locus_tag=PHA55_RS05760;product=YkgJ family cysteine cluster protein;protein_id=WP_001303809.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1175449	1176159	.	-	.	ID=gene-PHA55_RS05765;Name=ecpE;gbkey=Gene;gene=ecpE;gene_biotype=protein_coding;locus_tag=PHA55_RS05765;old_locus_tag=PHA55_05765
NZ_CP116044.1	Protein Homology	CDS	1175449	1176159	.	-	0	ID=cds-WP_001296887.1;Parent=gene-PHA55_RS05765;Dbxref=Genbank:WP_001296887.1;Name=WP_001296887.1;gbkey=CDS;gene=ecpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414823.2;locus_tag=PHA55_RS05765;product=fimbrial chaperone EcpE;protein_id=WP_001296887.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1176128	1177771	.	-	.	ID=gene-PHA55_RS05770;Name=ecpD;gbkey=Gene;gene=ecpD;gene_biotype=protein_coding;locus_tag=PHA55_RS05770;old_locus_tag=PHA55_05770
NZ_CP116044.1	Protein Homology	CDS	1176128	1177771	.	-	0	ID=cds-WP_001315269.1;Parent=gene-PHA55_RS05770;Dbxref=Genbank:WP_001315269.1;Name=WP_001315269.1;gbkey=CDS;gene=ecpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414824.1;locus_tag=PHA55_RS05770;product=fimbrial adhesin EcpD;protein_id=WP_001315269.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1177761	1180286	.	-	.	ID=gene-PHA55_RS05775;Name=ecpC;gbkey=Gene;gene=ecpC;gene_biotype=protein_coding;gene_synonym=yagX;locus_tag=PHA55_RS05775;old_locus_tag=PHA55_05775
NZ_CP116044.1	Protein Homology	CDS	1177761	1180286	.	-	0	ID=cds-WP_001131079.1;Parent=gene-PHA55_RS05775;Dbxref=Genbank:WP_001131079.1;Name=WP_001131079.1;gbkey=CDS;gene=ecpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414825.1;locus_tag=PHA55_RS05775;product=fimbrial usher EcpC;protein_id=WP_001131079.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1180312	1180980	.	-	.	ID=gene-PHA55_RS05780;Name=ecpB;gbkey=Gene;gene=ecpB;gene_biotype=protein_coding;gene_synonym=yagY;locus_tag=PHA55_RS05780;old_locus_tag=PHA55_05780
NZ_CP116044.1	Protein Homology	CDS	1180312	1180980	.	-	0	ID=cds-WP_000716398.1;Parent=gene-PHA55_RS05780;Dbxref=Genbank:WP_000716398.1;Name=WP_000716398.1;gbkey=CDS;gene=ecpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414826.1;locus_tag=PHA55_RS05780;product=fimbrial chaperone EcpB;protein_id=WP_000716398.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1181038	1181625	.	-	.	ID=gene-PHA55_RS05785;Name=ecpA;gbkey=Gene;gene=ecpA;gene_biotype=protein_coding;gene_synonym=matB;locus_tag=PHA55_RS05785;old_locus_tag=PHA55_05785
NZ_CP116044.1	Protein Homology	CDS	1181038	1181625	.	-	0	ID=cds-WP_000730972.1;Parent=gene-PHA55_RS05785;Dbxref=Genbank:WP_000730972.1;Name=WP_000730972.1;gbkey=CDS;gene=ecpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308350.1;locus_tag=PHA55_RS05785;product=common pilus major fimbrillin subunit EcpA;protein_id=WP_000730972.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1181700	1182242	.	-	.	ID=gene-PHA55_RS05790;Name=ecpR;gbkey=Gene;gene=ecpR;gene_biotype=protein_coding;gene_synonym=matA;locus_tag=PHA55_RS05790;old_locus_tag=PHA55_05790
NZ_CP116044.1	Protein Homology	CDS	1181700	1182242	.	-	0	ID=cds-WP_001296902.1;Parent=gene-PHA55_RS05790;Dbxref=Genbank:WP_001296902.1;Name=WP_001296902.1;gbkey=CDS;gene=ecpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308351.2;locus_tag=PHA55_RS05790;product=ECP biosynthesis operon DNA-binding transcriptional regulator EcpR;protein_id=WP_001296902.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1183060	1183293	.	+	.	ID=gene-PHA55_RS05795;Name=ykgL;gbkey=Gene;gene=ykgL;gene_biotype=protein_coding;locus_tag=PHA55_RS05795;old_locus_tag=PHA55_05795
NZ_CP116044.1	Protein Homology	CDS	1183060	1183293	.	+	0	ID=cds-WP_009008334.1;Parent=gene-PHA55_RS05795;Dbxref=Genbank:WP_009008334.1;Name=WP_009008334.1;gbkey=CDS;gene=ykgL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414829.1;locus_tag=PHA55_RS05795;product=protein YkgL;protein_id=WP_009008334.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1183328	1183468	.	-	.	ID=gene-PHA55_RS05800;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=PHA55_RS05800;old_locus_tag=PHA55_05800
NZ_CP116044.1	Protein Homology	CDS	1183328	1183468	.	-	0	ID=cds-WP_000866441.1;Parent=gene-PHA55_RS05800;Dbxref=Genbank:WP_000866441.1;Name=WP_000866441.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588437.1;locus_tag=PHA55_RS05800;product=type B 50S ribosomal protein L36;protein_id=WP_000866441.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1183468	1183731	.	-	.	ID=gene-PHA55_RS05805;Name=ykgM;gbkey=Gene;gene=ykgM;gene_biotype=protein_coding;locus_tag=PHA55_RS05805;old_locus_tag=PHA55_05805
NZ_CP116044.1	Protein Homology	CDS	1183468	1183731	.	-	0	ID=cds-WP_000803998.1;Parent=gene-PHA55_RS05805;Dbxref=Genbank:WP_000803998.1;Name=WP_000803998.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414830.1;locus_tag=PHA55_RS05805;product=type B 50S ribosomal protein L31;protein_id=WP_000803998.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	1184065	1184148	.	-	.	ID=gene-PHA55_RS05810;Name=PHA55_RS05810;end_range=1184148,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS05810;partial=true;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	1184065	1184148	.	-	0	ID=cds-PHA55_RS05810;Parent=gene-PHA55_RS05810;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1184148,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF041474.1;locus_tag=PHA55_RS05810;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	1184669	1184758	.	-	.	ID=gene-PHA55_RS05815;Name=PHA55_RS05815;end_range=1184758,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS05815;old_locus_tag=PHA55_05815;partial=true;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	1184669	1184758	.	-	0	ID=cds-PHA55_RS05815;Parent=gene-PHA55_RS05815;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1184758,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308358.1;locus_tag=PHA55_RS05815;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	1185311	1189564	.	+	.	ID=gene-PHA55_RS05820;Name=fdeC;gbkey=Gene;gene=fdeC;gene_biotype=protein_coding;locus_tag=PHA55_RS05820;old_locus_tag=PHA55_05820
NZ_CP116044.1	Protein Homology	CDS	1185311	1189564	.	+	0	ID=cds-WP_000092619.1;Parent=gene-PHA55_RS05820;Dbxref=Genbank:WP_000092619.1;Name=WP_000092619.1;gbkey=CDS;gene=fdeC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000092554.1;locus_tag=PHA55_RS05820;product=inverse autotransporter adhesin FdeC;protein_id=WP_000092619.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1189685	1190542	.	-	.	ID=gene-PHA55_RS05825;Name=PHA55_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05825;old_locus_tag=PHA55_05825
NZ_CP116044.1	Protein Homology	CDS	1189685	1190542	.	-	0	ID=cds-WP_001306920.1;Parent=gene-PHA55_RS05825;Dbxref=Genbank:WP_001306920.1;Name=WP_001306920.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308364.2;locus_tag=PHA55_RS05825;product=helix-turn-helix domain-containing protein;protein_id=WP_001306920.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	1190845	1190973	.	+	.	ID=gene-PHA55_RS05830;Name=PHA55_RS05830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS05830;old_locus_tag=PHA55_05830;partial=true;pseudo=true;start_range=.,1190845
NZ_CP116044.1	Protein Homology	CDS	1190845	1190973	.	+	0	ID=cds-PHA55_RS05830;Parent=gene-PHA55_RS05830;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308365.3;locus_tag=PHA55_RS05830;partial=true;product=aldo/keto reductase;pseudo=true;start_range=.,1190845;transl_table=11
NZ_CP116044.1	RefSeq	gene	1191132	1191725	.	-	.	ID=gene-PHA55_RS05835;Name=rclC;gbkey=Gene;gene=rclC;gene_biotype=protein_coding;locus_tag=PHA55_RS05835;old_locus_tag=PHA55_05835
NZ_CP116044.1	Protein Homology	CDS	1191132	1191725	.	-	0	ID=cds-WP_001306921.1;Parent=gene-PHA55_RS05835;Dbxref=Genbank:WP_001306921.1;Name=WP_001306921.1;gbkey=CDS;gene=rclC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414835.2;locus_tag=PHA55_RS05835;product=reactive chlorine species resistance protein RclC;protein_id=WP_001306921.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1191737	1191973	.	-	.	ID=gene-PHA55_RS05840;Name=rclB;gbkey=Gene;gene=rclB;gene_biotype=protein_coding;locus_tag=PHA55_RS05840;old_locus_tag=PHA55_05840
NZ_CP116044.1	Protein Homology	CDS	1191737	1191973	.	-	0	ID=cds-WP_000474077.1;Parent=gene-PHA55_RS05840;Dbxref=Genbank:WP_000474077.1;Name=WP_000474077.1;gbkey=CDS;gene=rclB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414837.2;locus_tag=PHA55_RS05840;product=reactive chlorine resistance periplasmic protein RclB;protein_id=WP_000474077.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1192082	1193407	.	-	.	ID=gene-PHA55_RS05845;Name=rclA;gbkey=Gene;gene=rclA;gene_biotype=protein_coding;locus_tag=PHA55_RS05845;old_locus_tag=PHA55_05845
NZ_CP116044.1	Protein Homology	CDS	1192082	1193407	.	-	0	ID=cds-WP_001046295.1;Parent=gene-PHA55_RS05845;Dbxref=Genbank:WP_001046295.1;Name=WP_001046295.1;gbkey=CDS;gene=rclA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414838.2;locus_tag=PHA55_RS05845;product=reactive chlorine resistance oxidoreductase RclA;protein_id=WP_001046295.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1193633	1194487	.	+	.	ID=gene-PHA55_RS05850;Name=rclR;gbkey=Gene;gene=rclR;gene_biotype=protein_coding;locus_tag=PHA55_RS05850;old_locus_tag=PHA55_05850
NZ_CP116044.1	Protein Homology	CDS	1193633	1194487	.	+	0	ID=cds-WP_000339593.1;Parent=gene-PHA55_RS05850;Dbxref=Genbank:WP_000339593.1;Name=WP_000339593.1;gbkey=CDS;gene=rclR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308370.1;locus_tag=PHA55_RS05850;product=reactive chlorine-specific transcriptional regulator RclR;protein_id=WP_000339593.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1195015	1195734	.	+	.	ID=gene-PHA55_RS05855;Name=ykgE;gbkey=Gene;gene=ykgE;gene_biotype=protein_coding;locus_tag=PHA55_RS05855;old_locus_tag=PHA55_05855
NZ_CP116044.1	Protein Homology	CDS	1195015	1195734	.	+	0	ID=cds-WP_001102119.1;Parent=gene-PHA55_RS05855;Dbxref=Genbank:WP_001102119.1;Name=WP_001102119.1;gbkey=CDS;gene=ykgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308371.1;locus_tag=PHA55_RS05855;product=(Fe-S)-binding protein;protein_id=WP_001102119.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1195745	1197172	.	+	.	ID=gene-PHA55_RS05860;Name=ykgF;gbkey=Gene;gene=ykgF;gene_biotype=protein_coding;locus_tag=PHA55_RS05860;old_locus_tag=PHA55_05860
NZ_CP116044.1	Protein Homology	CDS	1195745	1197172	.	+	0	ID=cds-WP_042099142.1;Parent=gene-PHA55_RS05860;Dbxref=Genbank:WP_042099142.1;Name=WP_042099142.1;Ontology_term=GO:0019516,GO:0009055,GO:0051536;gbkey=CDS;gene=ykgF;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=lactate oxidation|0019516||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706212.1;locus_tag=PHA55_RS05860;product=LutB/LldF family L-lactate oxidation iron-sulfur protein;protein_id=WP_042099142.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1197165	1197860	.	+	.	ID=gene-PHA55_RS05865;Name=ykgG;gbkey=Gene;gene=ykgG;gene_biotype=protein_coding;locus_tag=PHA55_RS05865;old_locus_tag=PHA55_05865
NZ_CP116044.1	Protein Homology	CDS	1197165	1197860	.	+	0	ID=cds-WP_001358288.1;Parent=gene-PHA55_RS05865;Dbxref=Genbank:WP_001358288.1;Name=WP_001358288.1;gbkey=CDS;gene=ykgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414842.4;locus_tag=PHA55_RS05865;product=lactate utilization protein C;protein_id=WP_001358288.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1198106	1198771	.	-	.	ID=gene-PHA55_RS05870;Name=ykgH;gbkey=Gene;gene=ykgH;gene_biotype=protein_coding;locus_tag=PHA55_RS05870;old_locus_tag=PHA55_05870
NZ_CP116044.1	Protein Homology	CDS	1198106	1198771	.	-	0	ID=cds-WP_001209088.1;Parent=gene-PHA55_RS05870;Dbxref=Genbank:WP_001209088.1;Name=WP_001209088.1;gbkey=CDS;gene=ykgH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001209093.1;locus_tag=PHA55_RS05870;product=protein YkgH;protein_id=WP_001209088.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1198984	1200654	.	-	.	ID=gene-PHA55_RS05875;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=PHA55_RS05875;old_locus_tag=PHA55_05875
NZ_CP116044.1	Protein Homology	CDS	1198984	1200654	.	-	0	ID=cds-WP_001159102.1;Parent=gene-PHA55_RS05875;Dbxref=Genbank:WP_001159102.1;Name=WP_001159102.1;Ontology_term=GO:0019285,GO:0008812;gbkey=CDS;gene=betA;go_function=choline dehydrogenase activity|0008812||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414845.1;locus_tag=PHA55_RS05875;product=choline dehydrogenase;protein_id=WP_001159102.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1200668	1202140	.	-	.	ID=gene-PHA55_RS05880;Name=betB;gbkey=Gene;gene=betB;gene_biotype=protein_coding;locus_tag=PHA55_RS05880;old_locus_tag=PHA55_05880
NZ_CP116044.1	Protein Homology	CDS	1200668	1202140	.	-	0	ID=cds-WP_021556526.1;Parent=gene-PHA55_RS05880;Dbxref=Genbank:WP_021556526.1;Name=WP_021556526.1;Ontology_term=GO:0019285,GO:0008802,GO:0046872;gbkey=CDS;gene=betB;go_function=betaine-aldehyde dehydrogenase activity|0008802||IEA,metal ion binding|0046872||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414846.1;locus_tag=PHA55_RS05880;product=betaine-aldehyde dehydrogenase;protein_id=WP_021556526.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1202154	1202741	.	-	.	ID=gene-PHA55_RS05885;Name=betI;gbkey=Gene;gene=betI;gene_biotype=protein_coding;locus_tag=PHA55_RS05885;old_locus_tag=PHA55_05885
NZ_CP116044.1	Protein Homology	CDS	1202154	1202741	.	-	0	ID=cds-WP_001301903.1;Parent=gene-PHA55_RS05885;Dbxref=Genbank:WP_001301903.1;Name=WP_001301903.1;Ontology_term=GO:0003677;gbkey=CDS;gene=betI;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308386.3;locus_tag=PHA55_RS05885;product=transcriptional regulator BetI;protein_id=WP_001301903.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1202870	1204903	.	+	.	ID=gene-PHA55_RS05890;Name=betT;gbkey=Gene;gene=betT;gene_biotype=protein_coding;locus_tag=PHA55_RS05890;old_locus_tag=PHA55_05890
NZ_CP116044.1	Protein Homology	CDS	1202870	1204903	.	+	0	ID=cds-WP_000131044.1;Parent=gene-PHA55_RS05890;Dbxref=Genbank:WP_000131044.1;Name=WP_000131044.1;gbkey=CDS;gene=betT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308387.1;locus_tag=PHA55_RS05890;product=choline BCCT transporter BetT;protein_id=WP_000131044.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1205476	1209459	.	+	.	ID=gene-PHA55_RS05895;Name=ehaA;gbkey=Gene;gene=ehaA;gene_biotype=protein_coding;locus_tag=PHA55_RS05895;old_locus_tag=PHA55_05895
NZ_CP116044.1	Protein Homology	CDS	1205476	1209459	.	+	0	ID=cds-WP_001341217.1;Parent=gene-PHA55_RS05895;Dbxref=Genbank:WP_001341217.1;Name=WP_001341217.1;gbkey=CDS;gene=ehaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308389.1;locus_tag=PHA55_RS05895;product=autotransporter adhesin EhaA;protein_id=WP_001341217.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1209601	1210689	.	+	.	ID=gene-PHA55_RS05900;Name=pdeL;gbkey=Gene;gene=pdeL;gene_biotype=protein_coding;locus_tag=PHA55_RS05900;old_locus_tag=PHA55_05900
NZ_CP116044.1	Protein Homology	CDS	1209601	1210689	.	+	0	ID=cds-WP_000146391.1;Parent=gene-PHA55_RS05900;Dbxref=Genbank:WP_000146391.1;Name=WP_000146391.1;gbkey=CDS;gene=pdeL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308390.1;locus_tag=PHA55_RS05900;product=EAL domain-containing protein;protein_id=WP_000146391.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1210731	1211663	.	-	.	ID=gene-PHA55_RS05905;Name=yahB;gbkey=Gene;gene=yahB;gene_biotype=protein_coding;locus_tag=PHA55_RS05905;old_locus_tag=PHA55_05905
NZ_CP116044.1	Protein Homology	CDS	1210731	1211663	.	-	0	ID=cds-WP_001084392.1;Parent=gene-PHA55_RS05905;Dbxref=Genbank:WP_001084392.1;Name=WP_001084392.1;gbkey=CDS;gene=yahB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414850.1;locus_tag=PHA55_RS05905;product=LysR substrate-binding domain-containing protein;protein_id=WP_001084392.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1211755	1212252	.	-	.	ID=gene-PHA55_RS05910;Name=yahC;gbkey=Gene;gene=yahC;gene_biotype=protein_coding;locus_tag=PHA55_RS05910;old_locus_tag=PHA55_05910
NZ_CP116044.1	Protein Homology	CDS	1211755	1212252	.	-	0	ID=cds-WP_001013880.1;Parent=gene-PHA55_RS05910;Dbxref=Genbank:WP_001013880.1;Name=WP_001013880.1;gbkey=CDS;gene=yahC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414851.1;locus_tag=PHA55_RS05910;product=DUF1097 domain-containing protein;protein_id=WP_001013880.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1212510	1213115	.	+	.	ID=gene-PHA55_RS05915;Name=yahD;gbkey=Gene;gene=yahD;gene_biotype=protein_coding;locus_tag=PHA55_RS05915;old_locus_tag=PHA55_05915
NZ_CP116044.1	Protein Homology	CDS	1212510	1213115	.	+	0	ID=cds-WP_000023635.1;Parent=gene-PHA55_RS05915;Dbxref=Genbank:WP_000023635.1;Name=WP_000023635.1;gbkey=CDS;gene=yahD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414852.1;locus_tag=PHA55_RS05915;product=ankyrin repeat domain-containing protein;protein_id=WP_000023635.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1213155	1214018	.	+	.	ID=gene-PHA55_RS05920;Name=yahE;gbkey=Gene;gene=yahE;gene_biotype=protein_coding;locus_tag=PHA55_RS05920;old_locus_tag=PHA55_05920
NZ_CP116044.1	Protein Homology	CDS	1213155	1214018	.	+	0	ID=cds-WP_021556527.1;Parent=gene-PHA55_RS05920;Dbxref=Genbank:WP_021556527.1;Name=WP_021556527.1;gbkey=CDS;gene=yahE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308395.1;locus_tag=PHA55_RS05920;product=DUF2877 domain-containing protein;protein_id=WP_021556527.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1214008	1215555	.	+	.	ID=gene-PHA55_RS05925;Name=fdrA;gbkey=Gene;gene=fdrA;gene_biotype=protein_coding;locus_tag=PHA55_RS05925;old_locus_tag=PHA55_05925
NZ_CP116044.1	Protein Homology	CDS	1214008	1215555	.	+	0	ID=cds-WP_000111812.1;Parent=gene-PHA55_RS05925;Dbxref=Genbank:WP_000111812.1;Name=WP_000111812.1;Ontology_term=GO:0003824;gbkey=CDS;gene=fdrA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414854.1;locus_tag=PHA55_RS05925;product=acyl-CoA synthetase FdrA;protein_id=WP_000111812.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1215555	1216973	.	+	.	ID=gene-PHA55_RS05930;Name=yahG;gbkey=Gene;gene=yahG;gene_biotype=protein_coding;locus_tag=PHA55_RS05930;old_locus_tag=PHA55_05930
NZ_CP116044.1	Protein Homology	CDS	1215555	1216973	.	+	0	ID=cds-WP_000083455.1;Parent=gene-PHA55_RS05930;Dbxref=Genbank:WP_000083455.1;Name=WP_000083455.1;gbkey=CDS;gene=yahG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414855.1;locus_tag=PHA55_RS05930;product=DUF1116 domain-containing protein;protein_id=WP_000083455.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1217116	1218066	.	+	.	ID=gene-PHA55_RS05935;Name=yahI;gbkey=Gene;gene=yahI;gene_biotype=protein_coding;locus_tag=PHA55_RS05935;old_locus_tag=PHA55_05935
NZ_CP116044.1	Protein Homology	CDS	1217116	1218066	.	+	0	ID=cds-WP_000661646.1;Parent=gene-PHA55_RS05935;Dbxref=Genbank:WP_000661646.1;Name=WP_000661646.1;gbkey=CDS;gene=yahI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308399.1;locus_tag=PHA55_RS05935;product=carbamate kinase family protein;protein_id=WP_000661646.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1218076	1219458	.	+	.	ID=gene-PHA55_RS05940;Name=yahJ;gbkey=Gene;gene=yahJ;gene_biotype=protein_coding;locus_tag=PHA55_RS05940;old_locus_tag=PHA55_05940
NZ_CP116044.1	Protein Homology	CDS	1218076	1219458	.	+	0	ID=cds-WP_260589742.1;Parent=gene-PHA55_RS05940;Dbxref=Genbank:WP_260589742.1;Name=WP_260589742.1;gbkey=CDS;gene=yahJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414858.1;locus_tag=PHA55_RS05940;product=amidohydrolase family protein;protein_id=WP_260589742.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1219757	1220167	.	+	.	ID=gene-PHA55_RS05945;Name=PHA55_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05945;old_locus_tag=PHA55_05945
NZ_CP116044.1	Protein Homology	CDS	1219757	1220167	.	+	0	ID=cds-WP_001325907.1;Parent=gene-PHA55_RS05945;Dbxref=Genbank:WP_001325907.1;Name=WP_001325907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502591.1;locus_tag=PHA55_RS05945;product=ASCH domain-containing protein;protein_id=WP_001325907.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1220421	1221404	.	+	.	ID=gene-PHA55_RS05950;Name=PHA55_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05950;old_locus_tag=PHA55_05950
NZ_CP116044.1	Protein Homology	CDS	1220421	1221404	.	+	0	ID=cds-WP_001042107.1;Parent=gene-PHA55_RS05950;Dbxref=Genbank:WP_001042107.1;Name=WP_001042107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224897.1;locus_tag=PHA55_RS05950;product=autoinducer 2 ABC transporter substrate-binding protein;protein_id=WP_001042107.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1221453	1222937	.	+	.	ID=gene-PHA55_RS05955;Name=PHA55_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05955;old_locus_tag=PHA55_05955
NZ_CP116044.1	Protein Homology	CDS	1221453	1222937	.	+	0	ID=cds-WP_000447335.1;Parent=gene-PHA55_RS05955;Dbxref=Genbank:WP_000447335.1;Name=WP_000447335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308402.2;locus_tag=PHA55_RS05955;product=sugar ABC transporter ATP-binding protein;protein_id=WP_000447335.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1222930	1223901	.	+	.	ID=gene-PHA55_RS05960;Name=PHA55_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05960;old_locus_tag=PHA55_05960
NZ_CP116044.1	Protein Homology	CDS	1222930	1223901	.	+	0	ID=cds-WP_000818900.1;Parent=gene-PHA55_RS05960;Dbxref=Genbank:WP_000818900.1;Name=WP_000818900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308404.1;locus_tag=PHA55_RS05960;product=ABC transporter permease;protein_id=WP_000818900.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1223898	1224854	.	+	.	ID=gene-PHA55_RS05965;Name=PHA55_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS05965;old_locus_tag=PHA55_05965
NZ_CP116044.1	Protein Homology	CDS	1223898	1224854	.	+	0	ID=cds-WP_000750340.1;Parent=gene-PHA55_RS05965;Dbxref=Genbank:WP_000750340.1;Name=WP_000750340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308405.1;locus_tag=PHA55_RS05965;product=ABC transporter permease;protein_id=WP_000750340.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1224941	1225990	.	+	.	ID=gene-PHA55_RS05970;Name=yahK;gbkey=Gene;gene=yahK;gene_biotype=protein_coding;locus_tag=PHA55_RS05970;old_locus_tag=PHA55_05970
NZ_CP116044.1	Protein Homology	CDS	1224941	1225990	.	+	0	ID=cds-WP_000692742.1;Parent=gene-PHA55_RS05970;Dbxref=Genbank:WP_000692742.1;Name=WP_000692742.1;gbkey=CDS;gene=yahK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308406.1;locus_tag=PHA55_RS05970;product=NADPH-dependent aldehyde reductase YahK;protein_id=WP_000692742.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1226233	1227048	.	+	.	ID=gene-PHA55_RS05975;Name=yahL;gbkey=Gene;gene=yahL;gene_biotype=protein_coding;locus_tag=PHA55_RS05975;old_locus_tag=PHA55_05975
NZ_CP116044.1	Protein Homology	CDS	1226233	1227048	.	+	0	ID=cds-WP_260589743.1;Parent=gene-PHA55_RS05975;Dbxref=Genbank:WP_260589743.1;Name=WP_260589743.1;gbkey=CDS;gene=yahL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414860.1;locus_tag=PHA55_RS05975;product=protein YahL;protein_id=WP_260589743.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1227461	1227706	.	+	.	ID=gene-PHA55_RS05980;Name=yahM;gbkey=Gene;gene=yahM;gene_biotype=protein_coding;locus_tag=PHA55_RS05980;old_locus_tag=PHA55_05980
NZ_CP116044.1	Protein Homology	CDS	1227461	1227706	.	+	0	ID=cds-WP_000290613.1;Parent=gene-PHA55_RS05980;Dbxref=Genbank:WP_000290613.1;Name=WP_000290613.1;gbkey=CDS;gene=yahM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414861.2;locus_tag=PHA55_RS05980;product=protein YahM;protein_id=WP_000290613.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1227723	1228394	.	-	.	ID=gene-PHA55_RS05985;Name=yahN;gbkey=Gene;gene=yahN;gene_biotype=protein_coding;locus_tag=PHA55_RS05985;old_locus_tag=PHA55_05985
NZ_CP116044.1	Protein Homology	CDS	1227723	1228394	.	-	0	ID=cds-WP_000976977.1;Parent=gene-PHA55_RS05985;Dbxref=Genbank:WP_000976977.1;Name=WP_000976977.1;gbkey=CDS;gene=yahN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414862.1;locus_tag=PHA55_RS05985;product=LysE family transporter;protein_id=WP_000976977.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1228541	1228816	.	+	.	ID=gene-PHA55_RS05990;Name=yahO;gbkey=Gene;gene=yahO;gene_biotype=protein_coding;locus_tag=PHA55_RS05990;old_locus_tag=PHA55_05990
NZ_CP116044.1	Protein Homology	CDS	1228541	1228816	.	+	0	ID=cds-WP_000691953.1;Parent=gene-PHA55_RS05990;Dbxref=Genbank:WP_000691953.1;Name=WP_000691953.1;gbkey=CDS;gene=yahO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308410.1;locus_tag=PHA55_RS05990;product=DUF1471 family periplasmic protein YahO;protein_id=WP_000691953.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1228914	1230500	.	-	.	ID=gene-PHA55_RS05995;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=PHA55_RS05995;old_locus_tag=PHA55_05995
NZ_CP116044.1	Protein Homology	CDS	1228914	1230500	.	-	0	ID=cds-WP_000941057.1;Parent=gene-PHA55_RS05995;Dbxref=Genbank:WP_000941057.1;Name=WP_000941057.1;gbkey=CDS;gene=prpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308411.1;locus_tag=PHA55_RS05995;product=propionate catabolism operon regulatory protein PrpR;protein_id=WP_000941057.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1230739	1231629	.	+	.	ID=gene-PHA55_RS06000;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=PHA55_RS06000;old_locus_tag=PHA55_06000
NZ_CP116044.1	Protein Homology	CDS	1230739	1231629	.	+	0	ID=cds-WP_000052173.1;Parent=gene-PHA55_RS06000;Dbxref=Genbank:WP_000052173.1;Name=WP_000052173.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414865.1;locus_tag=PHA55_RS06000;product=methylisocitrate lyase;protein_id=WP_000052173.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1231674	1232843	.	+	.	ID=gene-PHA55_RS06005;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=PHA55_RS06005;old_locus_tag=PHA55_06005
NZ_CP116044.1	Protein Homology	CDS	1231674	1232843	.	+	0	ID=cds-WP_001285908.1;Parent=gene-PHA55_RS06005;Dbxref=Genbank:WP_001285908.1;Name=WP_001285908.1;Ontology_term=GO:0050440;gbkey=CDS;gene=prpC;go_function=2-methylcitrate synthase activity|0050440||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414867.1;locus_tag=PHA55_RS06005;product=2-methylcitrate synthase;protein_id=WP_001285908.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1232877	1234328	.	+	.	ID=gene-PHA55_RS06010;Name=prpD;gbkey=Gene;gene=prpD;gene_biotype=protein_coding;locus_tag=PHA55_RS06010;old_locus_tag=PHA55_06010
NZ_CP116044.1	Protein Homology	CDS	1232877	1234328	.	+	0	ID=cds-WP_001275861.1;Parent=gene-PHA55_RS06010;Dbxref=Genbank:WP_001275861.1;Name=WP_001275861.1;Ontology_term=GO:0019629,GO:0047547;gbkey=CDS;gene=prpD;go_function=2-methylcitrate dehydratase activity|0047547||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414868.1;locus_tag=PHA55_RS06010;product=2-methylcitrate dehydratase;protein_id=WP_001275861.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	1234368	1236254	.	+	.	ID=gene-PHA55_RS06015;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=pseudogene;locus_tag=PHA55_RS06015;old_locus_tag=PHA55_06015;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	1234368	1236254	.	+	0	ID=cds-PHA55_RS06015;Parent=gene-PHA55_RS06015;Note=internal stop;Ontology_term=GO:0050218;gbkey=CDS;gene=prpE;go_function=propionate-CoA ligase activity|0050218||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308415.1;locus_tag=PHA55_RS06015;product=propionate--CoA ligase;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	1236622	1237602	.	+	.	ID=gene-PHA55_RS06020;Name=PHA55_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS06020;old_locus_tag=PHA55_06020
NZ_CP116044.1	Protein Homology	CDS	1236622	1237602	.	+	0	ID=cds-WP_000399648.1-6;Parent=gene-PHA55_RS06020;Dbxref=Genbank:WP_000399648.1;Name=WP_000399648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904434.1;locus_tag=PHA55_RS06020;product=IS110-like element IS621 family transposase;protein_id=WP_000399648.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1237871	1239130	.	+	.	ID=gene-PHA55_RS06025;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=PHA55_RS06025;old_locus_tag=PHA55_06025
NZ_CP116044.1	Protein Homology	CDS	1237871	1239130	.	+	0	ID=cds-WP_000076236.1;Parent=gene-PHA55_RS06025;Dbxref=Genbank:WP_000076236.1;Name=WP_000076236.1;Ontology_term=GO:0055085,GO:0015209,GO:0016020;gbkey=CDS;gene=codB;go_component=membrane|0016020||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414870.1;locus_tag=PHA55_RS06025;product=cytosine permease;protein_id=WP_000076236.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1239120	1240403	.	+	.	ID=gene-PHA55_RS06030;Name=codA;gbkey=Gene;gene=codA;gene_biotype=protein_coding;locus_tag=PHA55_RS06030;old_locus_tag=PHA55_06030
NZ_CP116044.1	Protein Homology	CDS	1239120	1240403	.	+	0	ID=cds-WP_001299008.1;Parent=gene-PHA55_RS06030;Dbxref=Genbank:WP_001299008.1;Name=WP_001299008.1;gbkey=CDS;gene=codA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308417.1;locus_tag=PHA55_RS06030;product=cytosine/isoguanine deaminase;protein_id=WP_001299008.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1240443	1241342	.	-	.	ID=gene-PHA55_RS06035;Name=cynR;gbkey=Gene;gene=cynR;gene_biotype=protein_coding;locus_tag=PHA55_RS06035;old_locus_tag=PHA55_06035
NZ_CP116044.1	Protein Homology	CDS	1240443	1241342	.	-	0	ID=cds-WP_000952485.1;Parent=gene-PHA55_RS06035;Dbxref=Genbank:WP_000952485.1;Name=WP_000952485.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cynR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308418.1;locus_tag=PHA55_RS06035;product=transcriptional regulator CynR;protein_id=WP_000952485.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1241452	1242111	.	+	.	ID=gene-PHA55_RS06040;Name=cynT;gbkey=Gene;gene=cynT;gene_biotype=protein_coding;locus_tag=PHA55_RS06040;old_locus_tag=PHA55_06040
NZ_CP116044.1	Protein Homology	CDS	1241452	1242111	.	+	0	ID=cds-WP_000658652.1;Parent=gene-PHA55_RS06040;Dbxref=Genbank:WP_000658652.1;Name=WP_000658652.1;gbkey=CDS;gene=cynT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414873.1;locus_tag=PHA55_RS06040;product=carbonic anhydrase CynT;protein_id=WP_000658652.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1242142	1242612	.	+	.	ID=gene-PHA55_RS06045;Name=cynS;gbkey=Gene;gene=cynS;gene_biotype=protein_coding;locus_tag=PHA55_RS06045;old_locus_tag=PHA55_06045
NZ_CP116044.1	Protein Homology	CDS	1242142	1242612	.	+	0	ID=cds-WP_000616241.1;Parent=gene-PHA55_RS06045;Dbxref=Genbank:WP_000616241.1;Name=WP_000616241.1;Ontology_term=GO:0009636,GO:0008824;gbkey=CDS;gene=cynS;go_function=cyanate hydratase activity|0008824||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308420.1;locus_tag=PHA55_RS06045;product=cyanase;protein_id=WP_000616241.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1242618	1243799	.	+	.	ID=gene-PHA55_RS06050;Name=cynX;gbkey=Gene;gene=cynX;gene_biotype=protein_coding;locus_tag=PHA55_RS06050;old_locus_tag=PHA55_06050
NZ_CP116044.1	Protein Homology	CDS	1242618	1243799	.	+	0	ID=cds-WP_001326099.1;Parent=gene-PHA55_RS06050;Dbxref=Genbank:WP_001326099.1;Name=WP_001326099.1;gbkey=CDS;gene=cynX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308421.2;locus_tag=PHA55_RS06050;product=cyanate transporter CynX;protein_id=WP_001326099.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1243970	1244950	.	-	.	ID=gene-PHA55_RS06055;Name=PHA55_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS06055;old_locus_tag=PHA55_06055
NZ_CP116044.1	Protein Homology	CDS	1243970	1244950	.	-	0	ID=cds-WP_000399648.1-7;Parent=gene-PHA55_RS06055;Dbxref=Genbank:WP_000399648.1;Name=WP_000399648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904434.1;locus_tag=PHA55_RS06055;product=IS110-like element IS621 family transposase;protein_id=WP_000399648.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1245181	1245792	.	-	.	ID=gene-PHA55_RS06060;Name=lacA;gbkey=Gene;gene=lacA;gene_biotype=protein_coding;locus_tag=PHA55_RS06060;old_locus_tag=PHA55_06060
NZ_CP116044.1	Protein Homology	CDS	1245181	1245792	.	-	0	ID=cds-WP_001335915.1;Parent=gene-PHA55_RS06060;Dbxref=Genbank:WP_001335915.1;Name=WP_001335915.1;gbkey=CDS;gene=lacA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414876.1;locus_tag=PHA55_RS06060;product=galactoside O-acetyltransferase;protein_id=WP_001335915.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1245858	1247111	.	-	.	ID=gene-PHA55_RS06065;Name=lacY;gbkey=Gene;gene=lacY;gene_biotype=protein_coding;locus_tag=PHA55_RS06065;old_locus_tag=PHA55_06065
NZ_CP116044.1	Protein Homology	CDS	1245858	1247111	.	-	0	ID=cds-WP_000291549.1;Parent=gene-PHA55_RS06065;Dbxref=Genbank:WP_000291549.1;Name=WP_000291549.1;gbkey=CDS;gene=lacY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414877.1;locus_tag=PHA55_RS06065;product=lactose permease;protein_id=WP_000291549.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1247163	1250237	.	-	.	ID=gene-PHA55_RS06070;Name=lacZ;gbkey=Gene;gene=lacZ;gene_biotype=protein_coding;locus_tag=PHA55_RS06070;old_locus_tag=PHA55_06070
NZ_CP116044.1	Protein Homology	CDS	1247163	1250237	.	-	0	ID=cds-WP_260589745.1;Parent=gene-PHA55_RS06070;Dbxref=Genbank:WP_260589745.1;Name=WP_260589745.1;gbkey=CDS;gene=lacZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414878.1;locus_tag=PHA55_RS06070;product=beta-galactosidase;protein_id=WP_260589745.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1250360	1251442	.	-	.	ID=gene-PHA55_RS06075;Name=lacI;gbkey=Gene;gene=lacI;gene_biotype=protein_coding;locus_tag=PHA55_RS06075;old_locus_tag=PHA55_06075
NZ_CP116044.1	Protein Homology	CDS	1250360	1251442	.	-	0	ID=cds-WP_000805902.1;Parent=gene-PHA55_RS06075;Dbxref=Genbank:WP_000805902.1;Name=WP_000805902.1;gbkey=CDS;gene=lacI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414879.3;locus_tag=PHA55_RS06075;product=DNA-binding transcriptional repressor LacI;protein_id=WP_000805902.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1251519	1252352	.	-	.	ID=gene-PHA55_RS06080;Name=mhpR;gbkey=Gene;gene=mhpR;gene_biotype=protein_coding;locus_tag=PHA55_RS06080;old_locus_tag=PHA55_06080
NZ_CP116044.1	Protein Homology	CDS	1251519	1252352	.	-	0	ID=cds-WP_024192756.1;Parent=gene-PHA55_RS06080;Dbxref=Genbank:WP_024192756.1;Name=WP_024192756.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=mhpR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414880.2;locus_tag=PHA55_RS06080;product=DNA-binding transcriptional regulator;protein_id=WP_024192756.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1252543	1254207	.	+	.	ID=gene-PHA55_RS06085;Name=mhpA;gbkey=Gene;gene=mhpA;gene_biotype=protein_coding;locus_tag=PHA55_RS06085;old_locus_tag=PHA55_06085
NZ_CP116044.1	Protein Homology	CDS	1252543	1254207	.	+	0	ID=cds-WP_001007449.1;Parent=gene-PHA55_RS06085;Dbxref=Genbank:WP_001007449.1;Name=WP_001007449.1;Ontology_term=GO:0019622,GO:0008688;gbkey=CDS;gene=mhpA;go_function=3-(3-hydroxyphenyl)propionate hydroxylase activity|0008688||IEA;go_process=3-(3-hydroxy)phenylpropionate catabolic process|0019622||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308429.1;locus_tag=PHA55_RS06085;product=bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;protein_id=WP_001007449.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1254209	1255153	.	+	.	ID=gene-PHA55_RS06090;Name=mhpB;gbkey=Gene;gene=mhpB;gene_biotype=protein_coding;locus_tag=PHA55_RS06090;old_locus_tag=PHA55_06090
NZ_CP116044.1	Protein Homology	CDS	1254209	1255153	.	+	0	ID=cds-WP_000543457.1;Parent=gene-PHA55_RS06090;Dbxref=Genbank:WP_000543457.1;Name=WP_000543457.1;Ontology_term=GO:0019439,GO:0047070;gbkey=CDS;gene=mhpB;go_function=3-carboxyethylcatechol 2%2C3-dioxygenase activity|0047070||IEA;go_process=aromatic compound catabolic process|0019439||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308430.1;locus_tag=PHA55_RS06090;product=3-carboxyethylcatechol 2%2C3-dioxygenase;protein_id=WP_000543457.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1255171	1256037	.	+	.	ID=gene-PHA55_RS06095;Name=mhpC;gbkey=Gene;gene=mhpC;gene_biotype=protein_coding;locus_tag=PHA55_RS06095;old_locus_tag=PHA55_06095
NZ_CP116044.1	Protein Homology	CDS	1255171	1256037	.	+	0	ID=cds-WP_260589746.1;Parent=gene-PHA55_RS06095;Dbxref=Genbank:WP_260589746.1;Name=WP_260589746.1;gbkey=CDS;gene=mhpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414883.5;locus_tag=PHA55_RS06095;product=2-hydroxy-6-oxonona-2%2C4-dienedioate hydrolase;protein_id=WP_260589746.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1256047	1256856	.	+	.	ID=gene-PHA55_RS06100;Name=mhpD;gbkey=Gene;gene=mhpD;gene_biotype=protein_coding;locus_tag=PHA55_RS06100;old_locus_tag=PHA55_06100
NZ_CP116044.1	Protein Homology	CDS	1256047	1256856	.	+	0	ID=cds-WP_000160724.1;Parent=gene-PHA55_RS06100;Dbxref=Genbank:WP_000160724.1;Name=WP_000160724.1;Ontology_term=GO:0019439,GO:0008684,GO:0030145;gbkey=CDS;gene=mhpD;go_function=2-oxopent-4-enoate hydratase activity|0008684||IEA,manganese ion binding|0030145||IEA;go_process=aromatic compound catabolic process|0019439||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308432.2;locus_tag=PHA55_RS06100;product=2-keto-4-pentenoate hydratase;protein_id=WP_000160724.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1256853	1257803	.	+	.	ID=gene-PHA55_RS06105;Name=mhpF;gbkey=Gene;gene=mhpF;gene_biotype=protein_coding;locus_tag=PHA55_RS06105;old_locus_tag=PHA55_06105
NZ_CP116044.1	Protein Homology	CDS	1256853	1257803	.	+	0	ID=cds-WP_000044314.1;Parent=gene-PHA55_RS06105;Dbxref=Genbank:WP_000044314.1;Name=WP_000044314.1;gbkey=CDS;gene=mhpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414885.1;locus_tag=PHA55_RS06105;product=acetaldehyde dehydrogenase;protein_id=WP_000044314.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1257800	1258813	.	+	.	ID=gene-PHA55_RS06110;Name=dmpG;gbkey=Gene;gene=dmpG;gene_biotype=protein_coding;locus_tag=PHA55_RS06110;old_locus_tag=PHA55_06110
NZ_CP116044.1	Protein Homology	CDS	1257800	1258813	.	+	0	ID=cds-WP_001013499.1;Parent=gene-PHA55_RS06110;Dbxref=Genbank:WP_001013499.1;Name=WP_001013499.1;Ontology_term=GO:0008701;gbkey=CDS;gene=dmpG;go_function=4-hydroxy-2-oxovalerate aldolase activity|0008701||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414886.1;locus_tag=PHA55_RS06110;product=4-hydroxy-2-oxovalerate aldolase;protein_id=WP_001013499.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1258989	1260200	.	+	.	ID=gene-PHA55_RS06115;Name=mhpT;gbkey=Gene;gene=mhpT;gene_biotype=protein_coding;locus_tag=PHA55_RS06115;old_locus_tag=PHA55_06115
NZ_CP116044.1	Protein Homology	CDS	1258989	1260200	.	+	0	ID=cds-WP_000107642.1;Parent=gene-PHA55_RS06115;Dbxref=Genbank:WP_000107642.1;Name=WP_000107642.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mhpT;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308435.2;locus_tag=PHA55_RS06115;product=3-(3-hydroxy-phenyl)propionate transporter MhpT;protein_id=WP_000107642.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1260302	1260841	.	+	.	ID=gene-PHA55_RS06120;Name=yaiL;gbkey=Gene;gene=yaiL;gene_biotype=protein_coding;locus_tag=PHA55_RS06120;old_locus_tag=PHA55_06120
NZ_CP116044.1	Protein Homology	CDS	1260302	1260841	.	+	0	ID=cds-WP_001096705.1;Parent=gene-PHA55_RS06120;Dbxref=Genbank:WP_001096705.1;Name=WP_001096705.1;gbkey=CDS;gene=yaiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414888.4;locus_tag=PHA55_RS06120;product=DUF2058 domain-containing protein;protein_id=WP_001096705.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1260966	1261799	.	-	.	ID=gene-PHA55_RS06125;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=PHA55_RS06125;old_locus_tag=PHA55_06125
NZ_CP116044.1	Protein Homology	CDS	1260966	1261799	.	-	0	ID=cds-WP_000419051.1;Parent=gene-PHA55_RS06125;Dbxref=Genbank:WP_000419051.1;Name=WP_000419051.1;Ontology_term=GO:0046292,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde metabolic process|0046292||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414889.1;locus_tag=PHA55_RS06125;product=S-formylglutathione hydrolase;protein_id=WP_000419051.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1261892	1263001	.	-	.	ID=gene-PHA55_RS06130;Name=frmA;gbkey=Gene;gene=frmA;gene_biotype=protein_coding;locus_tag=PHA55_RS06130;old_locus_tag=PHA55_06130
NZ_CP116044.1	Protein Homology	CDS	1261892	1263001	.	-	0	ID=cds-WP_000842102.1;Parent=gene-PHA55_RS06130;Dbxref=Genbank:WP_000842102.1;Name=WP_000842102.1;gbkey=CDS;gene=frmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308438.1;locus_tag=PHA55_RS06130;product=S-(hydroxymethyl)glutathione dehydrogenase;protein_id=WP_000842102.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1263036	1263311	.	-	.	ID=gene-PHA55_RS06135;Name=frmR;gbkey=Gene;gene=frmR;gene_biotype=protein_coding;locus_tag=PHA55_RS06135;old_locus_tag=PHA55_06135
NZ_CP116044.1	Protein Homology	CDS	1263036	1263311	.	-	0	ID=cds-WP_001141271.1;Parent=gene-PHA55_RS06135;Dbxref=Genbank:WP_001141271.1;Name=WP_001141271.1;gbkey=CDS;gene=frmR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414891.4;locus_tag=PHA55_RS06135;product=formaldehyde-responsive transcriptional repressor FrmR;protein_id=WP_001141271.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1263496	1264269	.	-	.	ID=gene-PHA55_RS06140;Name=yaiO;gbkey=Gene;gene=yaiO;gene_biotype=protein_coding;locus_tag=PHA55_RS06140;old_locus_tag=PHA55_06140
NZ_CP116044.1	Protein Homology	CDS	1263496	1264269	.	-	0	ID=cds-WP_000596085.1;Parent=gene-PHA55_RS06140;Dbxref=Genbank:WP_000596085.1;Name=WP_000596085.1;gbkey=CDS;gene=yaiO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414892.1;locus_tag=PHA55_RS06140;product=YaiO family outer membrane beta-barrel protein;protein_id=WP_000596085.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1264271	1264852	.	-	.	ID=gene-PHA55_RS06145;Name=PHA55_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS06145;old_locus_tag=PHA55_06145
NZ_CP116044.1	Protein Homology	CDS	1264271	1264852	.	-	0	ID=cds-WP_024194469.1;Parent=gene-PHA55_RS06145;Dbxref=Genbank:WP_024194469.1;Name=WP_024194469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001308433.1;locus_tag=PHA55_RS06145;product=acetyltransferase;protein_id=WP_024194469.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1264830	1266026	.	-	.	ID=gene-PHA55_RS06150;Name=yaiP;gbkey=Gene;gene=yaiP;gene_biotype=protein_coding;locus_tag=PHA55_RS06150;old_locus_tag=PHA55_06150
NZ_CP116044.1	Protein Homology	CDS	1264830	1266026	.	-	0	ID=cds-WP_000860438.1;Parent=gene-PHA55_RS06150;Dbxref=Genbank:WP_000860438.1;Name=WP_000860438.1;gbkey=CDS;gene=yaiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414897.1;locus_tag=PHA55_RS06150;product=glycosyltransferase family 2 protein;protein_id=WP_000860438.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1266036	1266707	.	-	.	ID=gene-PHA55_RS06155;Name=PHA55_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS06155;old_locus_tag=PHA55_06155
NZ_CP116044.1	Protein Homology	CDS	1266036	1266707	.	-	0	ID=cds-WP_000362029.1;Parent=gene-PHA55_RS06155;Dbxref=Genbank:WP_000362029.1;Name=WP_000362029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016241930.1;locus_tag=PHA55_RS06155;product=PIG-L family deacetylase;protein_id=WP_000362029.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1267323	1268285	.	+	.	ID=gene-PHA55_RS06160;Name=tauA;gbkey=Gene;gene=tauA;gene_biotype=protein_coding;locus_tag=PHA55_RS06160;old_locus_tag=PHA55_06160
NZ_CP116044.1	Protein Homology	CDS	1267323	1268285	.	+	0	ID=cds-WP_001306933.1;Parent=gene-PHA55_RS06160;Dbxref=Genbank:WP_001306933.1;Name=WP_001306933.1;Ontology_term=GO:0055085,GO:0022857,GO:0042597,GO:0043190;gbkey=CDS;gene=tauA;go_component=periplasmic space|0042597||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414899.2;locus_tag=PHA55_RS06160;product=taurine ABC transporter substrate-binding protein;protein_id=WP_001306933.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1268298	1269065	.	+	.	ID=gene-PHA55_RS06165;Name=tauB;gbkey=Gene;gene=tauB;gene_biotype=protein_coding;locus_tag=PHA55_RS06165;old_locus_tag=PHA55_06165
NZ_CP116044.1	Protein Homology	CDS	1268298	1269065	.	+	0	ID=cds-WP_000939347.1;Parent=gene-PHA55_RS06165;Dbxref=Genbank:WP_000939347.1;Name=WP_000939347.1;Ontology_term=GO:0005524,GO:0016020;gbkey=CDS;gene=tauB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308447.1;locus_tag=PHA55_RS06165;product=taurine ABC transporter ATP-binding subunit;protein_id=WP_000939347.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1269062	1269889	.	+	.	ID=gene-PHA55_RS06170;Name=tauC;gbkey=Gene;gene=tauC;gene_biotype=protein_coding;locus_tag=PHA55_RS06170;old_locus_tag=PHA55_06170
NZ_CP116044.1	Protein Homology	CDS	1269062	1269889	.	+	0	ID=cds-WP_000114607.1;Parent=gene-PHA55_RS06170;Dbxref=Genbank:WP_000114607.1;Name=WP_000114607.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tauC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706205.1;locus_tag=PHA55_RS06170;product=taurine ABC transporter permease TauC;protein_id=WP_000114607.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1269886	1270737	.	+	.	ID=gene-PHA55_RS06175;Name=tauD;gbkey=Gene;gene=tauD;gene_biotype=protein_coding;locus_tag=PHA55_RS06175;old_locus_tag=PHA55_06175
NZ_CP116044.1	Protein Homology	CDS	1269886	1270737	.	+	0	ID=cds-WP_000004049.1;Parent=gene-PHA55_RS06175;Dbxref=Genbank:WP_000004049.1;Name=WP_000004049.1;Ontology_term=GO:0016491;gbkey=CDS;gene=tauD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308449.1;locus_tag=PHA55_RS06175;product=taurine dioxygenase;protein_id=WP_000004049.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1270843	1271817	.	-	.	ID=gene-PHA55_RS06180;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=PHA55_RS06180;old_locus_tag=PHA55_06180
NZ_CP116044.1	Protein Homology	CDS	1270843	1271817	.	-	0	ID=cds-WP_001295337.1;Parent=gene-PHA55_RS06180;Dbxref=Genbank:WP_001295337.1;Name=WP_001295337.1;Ontology_term=GO:0033014,GO:0004655;gbkey=CDS;gene=hemB;go_function=porphobilinogen synthase activity|0004655||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308450.2;locus_tag=PHA55_RS06180;product=porphobilinogen synthase;protein_id=WP_001295337.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1272341	1275229	.	+	.	ID=gene-PHA55_RS06185;Name=PHA55_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS06185;old_locus_tag=PHA55_06185
NZ_CP116044.1	Protein Homology	CDS	1272341	1275229	.	+	0	ID=cds-WP_000556545.1;Parent=gene-PHA55_RS06185;Dbxref=Genbank:WP_000556545.1;Name=WP_000556545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000556408.1;locus_tag=PHA55_RS06185;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_000556545.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1275317	1275940	.	+	.	ID=gene-PHA55_RS06190;Name=iprA;gbkey=Gene;gene=iprA;gene_biotype=protein_coding;locus_tag=PHA55_RS06190;old_locus_tag=PHA55_06190
NZ_CP116044.1	Protein Homology	CDS	1275317	1275940	.	+	0	ID=cds-WP_001295335.1;Parent=gene-PHA55_RS06190;Dbxref=Genbank:WP_001295335.1;Name=WP_001295335.1;gbkey=CDS;gene=iprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414909.2;locus_tag=PHA55_RS06190;product=hydrogen peroxide resistance inhibitor IprA;protein_id=WP_001295335.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1275941	1277098	.	-	.	ID=gene-PHA55_RS06195;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=PHA55_RS06195;old_locus_tag=PHA55_06195
NZ_CP116044.1	Protein Homology	CDS	1275941	1277098	.	-	0	ID=cds-WP_000830741.1;Parent=gene-PHA55_RS06195;Dbxref=Genbank:WP_000830741.1;Name=WP_000830741.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308453.1;locus_tag=PHA55_RS06195;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WP_000830741.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1277450	1278670	.	+	.	ID=gene-PHA55_RS06200;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=PHA55_RS06200;old_locus_tag=PHA55_06200
NZ_CP116044.1	Protein Homology	CDS	1277450	1278670	.	+	0	ID=cds-WP_000477009.1;Parent=gene-PHA55_RS06200;Dbxref=Genbank:WP_000477009.1;Name=WP_000477009.1;Ontology_term=GO:0015833,GO:1904680;gbkey=CDS;gene=sbmA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706191.2;locus_tag=PHA55_RS06200;product=peptide antibiotic transporter SbmA;protein_id=WP_000477009.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1278683	1279777	.	+	.	ID=gene-PHA55_RS06205;Name=yaiW;gbkey=Gene;gene=yaiW;gene_biotype=protein_coding;locus_tag=PHA55_RS06205;old_locus_tag=PHA55_06205
NZ_CP116044.1	Protein Homology	CDS	1278683	1279777	.	+	0	ID=cds-WP_000092045.1;Parent=gene-PHA55_RS06205;Dbxref=Genbank:WP_000092045.1;Name=WP_000092045.1;gbkey=CDS;gene=yaiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308455.1;locus_tag=PHA55_RS06205;product=surface-exposed outer membrane lipoprotein YaiW;protein_id=WP_000092045.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1279836	1280144	.	-	.	ID=gene-PHA55_RS06210;Name=yaiY;gbkey=Gene;gene=yaiY;gene_biotype=protein_coding;locus_tag=PHA55_RS06210;old_locus_tag=PHA55_06210
NZ_CP116044.1	Protein Homology	CDS	1279836	1280144	.	-	0	ID=cds-WP_000763151.1;Parent=gene-PHA55_RS06210;Dbxref=Genbank:WP_000763151.1;Name=WP_000763151.1;gbkey=CDS;gene=yaiY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308456.1;locus_tag=PHA55_RS06210;product=YaiY family protein;protein_id=WP_000763151.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1280404	1280616	.	+	.	ID=gene-PHA55_RS06215;Name=yaiZ;gbkey=Gene;gene=yaiZ;gene_biotype=protein_coding;locus_tag=PHA55_RS06215;old_locus_tag=PHA55_06215
NZ_CP116044.1	Protein Homology	CDS	1280404	1280616	.	+	0	ID=cds-WP_001295334.1;Parent=gene-PHA55_RS06215;Dbxref=Genbank:WP_001295334.1;Name=WP_001295334.1;gbkey=CDS;gene=yaiZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414914.2;locus_tag=PHA55_RS06215;product=DUF2754 domain-containing protein;protein_id=WP_001295334.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1280640	1281734	.	-	.	ID=gene-PHA55_RS06220;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=PHA55_RS06220;old_locus_tag=PHA55_06220
NZ_CP116044.1	Protein Homology	CDS	1280640	1281734	.	-	0	ID=cds-WP_000413677.1;Parent=gene-PHA55_RS06220;Dbxref=Genbank:WP_000413677.1;Name=WP_000413677.1;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308458.1;locus_tag=PHA55_RS06220;product=D-alanine--D-alanine ligase;protein_id=WP_000413677.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1281812	1282015	.	+	.	ID=gene-PHA55_RS06225;Name=PHA55_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS06225;old_locus_tag=PHA55_06225
NZ_CP116044.1	Protein Homology	CDS	1281812	1282015	.	+	0	ID=cds-WP_001297130.1;Parent=gene-PHA55_RS06225;Dbxref=Genbank:WP_001297130.1;Name=WP_001297130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439229.1;locus_tag=PHA55_RS06225;product=hypothetical protein;protein_id=WP_001297130.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1282197	1282457	.	+	.	ID=gene-PHA55_RS06230;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;locus_tag=PHA55_RS06230;old_locus_tag=PHA55_06230
NZ_CP116044.1	Protein Homology	CDS	1282197	1282457	.	+	0	ID=cds-WP_000792970.1;Parent=gene-PHA55_RS06230;Dbxref=Genbank:WP_000792970.1;Name=WP_000792970.1;gbkey=CDS;gene=iraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308459.1;locus_tag=PHA55_RS06230;product=anti-adapter protein IraP;protein_id=WP_000792970.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1282558	1283973	.	+	.	ID=gene-PHA55_RS06235;Name=phoA;gbkey=Gene;gene=phoA;gene_biotype=protein_coding;locus_tag=PHA55_RS06235;old_locus_tag=PHA55_06235
NZ_CP116044.1	Protein Homology	CDS	1282558	1283973	.	+	0	ID=cds-WP_001367728.1;Parent=gene-PHA55_RS06235;Dbxref=Genbank:WP_001367728.1;Name=WP_001367728.1;Ontology_term=GO:0016791;gbkey=CDS;gene=phoA;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414917.2;locus_tag=PHA55_RS06235;product=alkaline phosphatase;protein_id=WP_001367728.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1284092	1284412	.	+	.	ID=gene-PHA55_RS06240;Name=psiF;gbkey=Gene;gene=psiF;gene_biotype=protein_coding;locus_tag=PHA55_RS06240;old_locus_tag=PHA55_06240
NZ_CP116044.1	Protein Homology	CDS	1284092	1284412	.	+	0	ID=cds-WP_001295332.1;Parent=gene-PHA55_RS06240;Dbxref=Genbank:WP_001295332.1;Name=WP_001295332.1;gbkey=CDS;gene=psiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414918.4;locus_tag=PHA55_RS06240;product=phosphate starvation-inducible protein PsiF;protein_id=WP_001295332.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1284514	1285629	.	+	.	ID=gene-PHA55_RS06245;Name=adrA;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;gene_synonym=dgcC;locus_tag=PHA55_RS06245;old_locus_tag=PHA55_06245
NZ_CP116044.1	Protein Homology	CDS	1284514	1285629	.	+	0	ID=cds-WP_000484026.1;Parent=gene-PHA55_RS06245;Dbxref=Genbank:WP_000484026.1;Name=WP_000484026.1;gbkey=CDS;gene=adrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414919.1;locus_tag=PHA55_RS06245;product=diguanylate cyclase AdrA;protein_id=WP_000484026.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1285646	1286455	.	-	.	ID=gene-PHA55_RS06250;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=PHA55_RS06250;old_locus_tag=PHA55_06250
NZ_CP116044.1	Protein Homology	CDS	1285646	1286455	.	-	0	ID=cds-WP_001295331.1;Parent=gene-PHA55_RS06250;Dbxref=Genbank:WP_001295331.1;Name=WP_001295331.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414920.1;locus_tag=PHA55_RS06250;product=pyrroline-5-carboxylate reductase;protein_id=WP_001295331.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1286575	1287033	.	+	.	ID=gene-PHA55_RS06255;Name=yaiI;gbkey=Gene;gene=yaiI;gene_biotype=protein_coding;locus_tag=PHA55_RS06255;old_locus_tag=PHA55_06255
NZ_CP116044.1	Protein Homology	CDS	1286575	1287033	.	+	0	ID=cds-WP_000158159.1;Parent=gene-PHA55_RS06255;Dbxref=Genbank:WP_000158159.1;Name=WP_000158159.1;gbkey=CDS;gene=yaiI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414921.2;locus_tag=PHA55_RS06255;product=YaiI/YqxD family protein;protein_id=WP_000158159.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1287216	1287740	.	+	.	ID=gene-PHA55_RS06260;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=PHA55_RS06260;old_locus_tag=PHA55_06260
NZ_CP116044.1	Protein Homology	CDS	1287216	1287740	.	+	0	ID=cds-WP_000193393.1;Parent=gene-PHA55_RS06260;Dbxref=Genbank:WP_000193393.1;Name=WP_000193393.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308465.1;locus_tag=PHA55_RS06260;product=shikimate kinase AroL;protein_id=WP_000193393.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1287790	1287981	.	+	.	ID=gene-PHA55_RS06265;Name=yaiA;gbkey=Gene;gene=yaiA;gene_biotype=protein_coding;locus_tag=PHA55_RS06265;old_locus_tag=PHA55_06265
NZ_CP116044.1	Protein Homology	CDS	1287790	1287981	.	+	0	ID=cds-WP_001142439.1;Parent=gene-PHA55_RS06265;Dbxref=Genbank:WP_001142439.1;Name=WP_001142439.1;gbkey=CDS;gene=yaiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308466.1;locus_tag=PHA55_RS06265;product=protein YaiA;protein_id=WP_001142439.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1288239	1288916	.	+	.	ID=gene-PHA55_RS06270;Name=aroM;gbkey=Gene;gene=aroM;gene_biotype=protein_coding;locus_tag=PHA55_RS06270;old_locus_tag=PHA55_06270
NZ_CP116044.1	Protein Homology	CDS	1288239	1288916	.	+	0	ID=cds-WP_001276422.1;Parent=gene-PHA55_RS06270;Dbxref=Genbank:WP_001276422.1;Name=WP_001276422.1;gbkey=CDS;gene=aroM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414924.1;locus_tag=PHA55_RS06270;product=AroM family protein;protein_id=WP_001276422.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1288988	1289272	.	+	.	ID=gene-PHA55_RS06275;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=PHA55_RS06275;old_locus_tag=PHA55_06275
NZ_CP116044.1	Protein Homology	CDS	1288988	1289272	.	+	0	ID=cds-WP_000941942.1;Parent=gene-PHA55_RS06275;Dbxref=Genbank:WP_000941942.1;Name=WP_000941942.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308468.1;locus_tag=PHA55_RS06275;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_000941942.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	1289420	1289761	.	+	.	ID=gene-PHA55_RS06280;Name=PHA55_RS06280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS06280;old_locus_tag=PHA55_06280;partial=true;pseudo=true;start_range=.,1289420
NZ_CP116044.1	Protein Homology	CDS	1289420	1289761	.	+	0	ID=cds-PHA55_RS06280;Parent=gene-PHA55_RS06280;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308469.2;locus_tag=PHA55_RS06280;partial=true;product=DUF2773 domain-containing protein;pseudo=true;start_range=.,1289420;transl_table=11
NZ_CP116044.1	RefSeq	gene	1289758	1289841	.	+	.	ID=gene-PHA55_RS06285;Name=PHA55_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS06285;old_locus_tag=PHA55_06285
NZ_CP116044.1	Protein Homology	CDS	1289758	1289841	.	+	0	ID=cds-WP_122367828.1;Parent=gene-PHA55_RS06285;Dbxref=Genbank:WP_122367828.1;Name=WP_122367828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518750.1;locus_tag=PHA55_RS06285;product=hypothetical protein;protein_id=WP_122367828.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1289919	1290830	.	-	.	ID=gene-PHA55_RS06290;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=PHA55_RS06290;old_locus_tag=PHA55_06290
NZ_CP116044.1	Protein Homology	CDS	1289919	1290830	.	-	0	ID=cds-WP_001298537.1;Parent=gene-PHA55_RS06290;Dbxref=Genbank:WP_001298537.1;Name=WP_001298537.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=PHA55_RS06290;product=recombination-associated protein RdgC;protein_id=WP_001298537.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1290955	1291863	.	+	.	ID=gene-PHA55_RS06295;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=PHA55_RS06295;old_locus_tag=PHA55_06295
NZ_CP116044.1	Protein Homology	CDS	1290955	1291863	.	+	0	ID=cds-WP_001219320.1;Parent=gene-PHA55_RS06295;Dbxref=Genbank:WP_001219320.1;Name=WP_001219320.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414928.2;locus_tag=PHA55_RS06295;product=fructokinase;protein_id=WP_001219320.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1292006	1293190	.	-	.	ID=gene-PHA55_RS06300;Name=araJ;gbkey=Gene;gene=araJ;gene_biotype=protein_coding;locus_tag=PHA55_RS06300;old_locus_tag=PHA55_06300
NZ_CP116044.1	Protein Homology	CDS	1292006	1293190	.	-	0	ID=cds-WP_001345723.1;Parent=gene-PHA55_RS06300;Dbxref=Genbank:WP_001345723.1;Name=WP_001345723.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=araJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414930.3;locus_tag=PHA55_RS06300;product=MFS transporter AraJ;protein_id=WP_001345723.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1293316	1296459	.	-	.	ID=gene-PHA55_RS06305;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=PHA55_RS06305;old_locus_tag=PHA55_06305
NZ_CP116044.1	Protein Homology	CDS	1293316	1296459	.	-	0	ID=cds-WP_000698883.1;Parent=gene-PHA55_RS06305;Dbxref=Genbank:WP_000698883.1;Name=WP_000698883.1;gbkey=CDS;gene=sbcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308474.2;locus_tag=PHA55_RS06305;product=exonuclease subunit SbcC;protein_id=WP_000698883.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1296456	1297658	.	-	.	ID=gene-PHA55_RS06310;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=PHA55_RS06310;old_locus_tag=PHA55_06310
NZ_CP116044.1	Protein Homology	CDS	1296456	1297658	.	-	0	ID=cds-WP_001221319.1;Parent=gene-PHA55_RS06310;Dbxref=Genbank:WP_001221319.1;Name=WP_001221319.1;Ontology_term=GO:0006259,GO:0008408;gbkey=CDS;gene=sbcD;go_function=3'-5' exonuclease activity|0008408||IEA;go_process=DNA metabolic process|0006259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308475.1;locus_tag=PHA55_RS06310;product=exonuclease subunit SbcD;protein_id=WP_001221319.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1297848	1298537	.	+	.	ID=gene-PHA55_RS06315;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=PHA55_RS06315;old_locus_tag=PHA55_06315
NZ_CP116044.1	Protein Homology	CDS	1297848	1298537	.	+	0	ID=cds-WP_000113933.1;Parent=gene-PHA55_RS06315;Dbxref=Genbank:WP_000113933.1;Name=WP_000113933.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=PHA55_RS06315;product=phosphate response regulator transcription factor PhoB;protein_id=WP_000113933.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1298595	1299890	.	+	.	ID=gene-PHA55_RS06320;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=PHA55_RS06320;old_locus_tag=PHA55_06320
NZ_CP116044.1	Protein Homology	CDS	1298595	1299890	.	+	0	ID=cds-WP_000893578.1;Parent=gene-PHA55_RS06320;Dbxref=Genbank:WP_000893578.1;Name=WP_000893578.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414934.1;locus_tag=PHA55_RS06320;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_000893578.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1300297	1301616	.	+	.	ID=gene-PHA55_RS06325;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=PHA55_RS06325;old_locus_tag=PHA55_06325
NZ_CP116044.1	Protein Homology	CDS	1300297	1301616	.	+	0	ID=cds-WP_096938432.1;Parent=gene-PHA55_RS06325;Dbxref=Genbank:WP_096938432.1;Name=WP_096938432.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308478.1;locus_tag=PHA55_RS06325;product=branched-chain amino acid transporter carrier protein BrnQ;protein_id=WP_096938432.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1301692	1303065	.	+	.	ID=gene-PHA55_RS06330;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=PHA55_RS06330;old_locus_tag=PHA55_06330
NZ_CP116044.1	Protein Homology	CDS	1301692	1303065	.	+	0	ID=cds-WP_001295329.1;Parent=gene-PHA55_RS06330;Dbxref=Genbank:WP_001295329.1;Name=WP_001295329.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=proY;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308479.1;locus_tag=PHA55_RS06330;product=proline-specific permease ProY;protein_id=WP_001295329.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1303221	1305038	.	+	.	ID=gene-PHA55_RS06335;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;locus_tag=PHA55_RS06335;old_locus_tag=PHA55_06335
NZ_CP116044.1	Protein Homology	CDS	1303221	1305038	.	+	0	ID=cds-WP_001299113.1;Parent=gene-PHA55_RS06335;Dbxref=Genbank:WP_001299113.1;Name=WP_001299113.1;Ontology_term=GO:0005975,GO:0004558;gbkey=CDS;gene=malZ;go_function=alpha-1%2C4-glucosidase activity|0004558||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308480.3;locus_tag=PHA55_RS06335;product=maltodextrin glucosidase;protein_id=WP_001299113.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1305043	1305624	.	-	.	ID=gene-PHA55_RS06340;Name=acpH;gbkey=Gene;gene=acpH;gene_biotype=protein_coding;locus_tag=PHA55_RS06340;old_locus_tag=PHA55_06340
NZ_CP116044.1	Protein Homology	CDS	1305043	1305624	.	-	0	ID=cds-WP_001009884.1;Parent=gene-PHA55_RS06340;Dbxref=Genbank:WP_001009884.1;Name=WP_001009884.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;gene=acpH;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414938.1;locus_tag=PHA55_RS06340;product=ACP phosphodiesterase;protein_id=WP_001009884.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1305717	1306787	.	+	.	ID=gene-PHA55_RS06345;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=PHA55_RS06345;old_locus_tag=PHA55_06345
NZ_CP116044.1	Protein Homology	CDS	1305717	1306787	.	+	0	ID=cds-WP_001266503.1;Parent=gene-PHA55_RS06345;Dbxref=Genbank:WP_001266503.1;Name=WP_001266503.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308483.1;locus_tag=PHA55_RS06345;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_001266503.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1306843	1307970	.	+	.	ID=gene-PHA55_RS06350;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=PHA55_RS06350;old_locus_tag=PHA55_06350
NZ_CP116044.1	Protein Homology	CDS	1306843	1307970	.	+	0	ID=cds-WP_000667319.1;Parent=gene-PHA55_RS06350;Dbxref=Genbank:WP_000667319.1;Name=WP_000667319.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=queuine tRNA-ribosyltransferase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=PHA55_RS06350;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_000667319.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1307993	1308325	.	+	.	ID=gene-PHA55_RS06355;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=PHA55_RS06355;old_locus_tag=PHA55_06355
NZ_CP116044.1	Protein Homology	CDS	1307993	1308325	.	+	0	ID=cds-WP_000007629.1;Parent=gene-PHA55_RS06355;Dbxref=Genbank:WP_000007629.1;Name=WP_000007629.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=PHA55_RS06355;product=preprotein translocase subunit YajC;protein_id=WP_000007629.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1308353	1310200	.	+	.	ID=gene-PHA55_RS06360;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=PHA55_RS06360;old_locus_tag=PHA55_06360
NZ_CP116044.1	Protein Homology	CDS	1308353	1310200	.	+	0	ID=cds-WP_087892889.1;Parent=gene-PHA55_RS06360;Dbxref=Genbank:WP_087892889.1;Name=WP_087892889.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=PHA55_RS06360;product=protein translocase subunit SecD;protein_id=WP_087892889.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1310211	1311182	.	+	.	ID=gene-PHA55_RS06365;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=PHA55_RS06365;old_locus_tag=PHA55_06365
NZ_CP116044.1	Protein Homology	CDS	1310211	1311182	.	+	0	ID=cds-WP_000046637.1;Parent=gene-PHA55_RS06365;Dbxref=Genbank:WP_000046637.1;Name=WP_000046637.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308487.1;locus_tag=PHA55_RS06365;product=protein translocase subunit SecF;protein_id=WP_000046637.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1311333	1311575	.	+	.	ID=gene-PHA55_RS06370;Name=PHA55_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS06370;old_locus_tag=PHA55_06370
NZ_CP116044.1	Protein Homology	CDS	1311333	1311575	.	+	0	ID=cds-WP_001226938.1;Parent=gene-PHA55_RS06370;Dbxref=Genbank:WP_001226938.1;Name=WP_001226938.1;Ontology_term=GO:0051983;gbkey=CDS;go_process=regulation of chromosome segregation|0051983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308488.1;locus_tag=PHA55_RS06370;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=WP_001226938.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1311568	1311849	.	+	.	ID=gene-PHA55_RS06375;Name=PHA55_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS06375;old_locus_tag=PHA55_06375
NZ_CP116044.1	Protein Homology	CDS	1311568	1311849	.	+	0	ID=cds-WP_000277485.1;Parent=gene-PHA55_RS06375;Dbxref=Genbank:WP_000277485.1;Name=WP_000277485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308489.1;locus_tag=PHA55_RS06375;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_000277485.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1311937	1312284	.	+	.	ID=gene-PHA55_RS06380;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=PHA55_RS06380;old_locus_tag=PHA55_06380
NZ_CP116044.1	Protein Homology	CDS	1311937	1312284	.	+	0	ID=cds-WP_000974813.1;Parent=gene-PHA55_RS06380;Dbxref=Genbank:WP_000974813.1;Name=WP_000974813.1;gbkey=CDS;gene=yajD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308490.1;locus_tag=PHA55_RS06380;product=HNH nuclease YajD;protein_id=WP_000974813.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1312461	1313345	.	-	.	ID=gene-PHA55_RS06385;Name=tsx;gbkey=Gene;gene=tsx;gene_biotype=protein_coding;locus_tag=PHA55_RS06385;old_locus_tag=PHA55_06385
NZ_CP116044.1	Protein Homology	CDS	1312461	1313345	.	-	0	ID=cds-WP_001295328.1;Parent=gene-PHA55_RS06385;Dbxref=Genbank:WP_001295328.1;Name=WP_001295328.1;gbkey=CDS;gene=tsx;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308491.1;locus_tag=PHA55_RS06385;product=nucleoside-specific channel-forming protein Tsx;protein_id=WP_001295328.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1313644	1314183	.	-	.	ID=gene-PHA55_RS06390;Name=yajI;gbkey=Gene;gene=yajI;gene_biotype=protein_coding;locus_tag=PHA55_RS06390;old_locus_tag=PHA55_06390
NZ_CP116044.1	Protein Homology	CDS	1313644	1314183	.	-	0	ID=cds-WP_001295327.1;Parent=gene-PHA55_RS06390;Dbxref=Genbank:WP_001295327.1;Name=WP_001295327.1;gbkey=CDS;gene=yajI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414946.4;locus_tag=PHA55_RS06390;product=DUF3251 domain-containing protein;protein_id=WP_001295327.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1314334	1314783	.	+	.	ID=gene-PHA55_RS06395;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=PHA55_RS06395;old_locus_tag=PHA55_06395
NZ_CP116044.1	Protein Homology	CDS	1314334	1314783	.	+	0	ID=cds-WP_000543535.1;Parent=gene-PHA55_RS06395;Dbxref=Genbank:WP_000543535.1;Name=WP_000543535.1;Ontology_term=GO:0006355,GO:0140110;gbkey=CDS;gene=nrdR;go_function=transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=PHA55_RS06395;product=transcriptional regulator NrdR;protein_id=WP_000543535.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1314787	1315890	.	+	.	ID=gene-PHA55_RS06400;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=PHA55_RS06400;old_locus_tag=PHA55_06400
NZ_CP116044.1	Protein Homology	CDS	1314787	1315890	.	+	0	ID=cds-WP_001150467.1;Parent=gene-PHA55_RS06400;Dbxref=Genbank:WP_001150467.1;Name=WP_001150467.1;Ontology_term=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706302.1;locus_tag=PHA55_RS06400;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_001150467.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1315979	1316449	.	+	.	ID=gene-PHA55_RS06405;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=PHA55_RS06405;old_locus_tag=PHA55_06405
NZ_CP116044.1	Protein Homology	CDS	1315979	1316449	.	+	0	ID=cds-WP_001021161.1;Parent=gene-PHA55_RS06405;Dbxref=Genbank:WP_001021161.1;Name=WP_001021161.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribE;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818760.1;locus_tag=PHA55_RS06405;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_001021161.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1316469	1316888	.	+	.	ID=gene-PHA55_RS06410;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=PHA55_RS06410;old_locus_tag=PHA55_06410
NZ_CP116044.1	Protein Homology	CDS	1316469	1316888	.	+	0	ID=cds-WP_000801125.1;Parent=gene-PHA55_RS06410;Dbxref=Genbank:WP_000801125.1;Name=WP_000801125.1;Ontology_term=GO:0006355;gbkey=CDS;gene=nusB;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308496.1;locus_tag=PHA55_RS06410;product=transcription antitermination factor NusB;protein_id=WP_000801125.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1316966	1317943	.	+	.	ID=gene-PHA55_RS06415;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=PHA55_RS06415;old_locus_tag=PHA55_06415
NZ_CP116044.1	Protein Homology	CDS	1316966	1317943	.	+	0	ID=cds-WP_000742089.1;Parent=gene-PHA55_RS06415;Dbxref=Genbank:WP_000742089.1;Name=WP_000742089.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414951.1;locus_tag=PHA55_RS06415;product=thiamine-phosphate kinase;protein_id=WP_000742089.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1317921	1318439	.	+	.	ID=gene-PHA55_RS06420;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=PHA55_RS06420;old_locus_tag=PHA55_06420
NZ_CP116044.1	Protein Homology	CDS	1317921	1318439	.	+	0	ID=cds-WP_000154044.1;Parent=gene-PHA55_RS06420;Dbxref=Genbank:WP_000154044.1;Name=WP_000154044.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414952.1;locus_tag=PHA55_RS06420;product=phosphatidylglycerophosphatase A;protein_id=WP_000154044.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1318493	1319467	.	-	.	ID=gene-PHA55_RS06425;Name=yajO;gbkey=Gene;gene=yajO;gene_biotype=protein_coding;locus_tag=PHA55_RS06425;old_locus_tag=PHA55_06425
NZ_CP116044.1	Protein Homology	CDS	1318493	1319467	.	-	0	ID=cds-WP_001199827.1;Parent=gene-PHA55_RS06425;Dbxref=Genbank:WP_001199827.1;Name=WP_001199827.1;gbkey=CDS;gene=yajO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414953.2;locus_tag=PHA55_RS06425;product=1-deoxyxylulose-5-phosphate synthase YajO;protein_id=WP_001199827.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1319647	1321509	.	-	.	ID=gene-PHA55_RS06430;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=PHA55_RS06430;old_locus_tag=PHA55_06430
NZ_CP116044.1	Protein Homology	CDS	1319647	1321509	.	-	0	ID=cds-WP_000006806.1;Parent=gene-PHA55_RS06430;Dbxref=Genbank:WP_000006806.1;Name=WP_000006806.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308501.1;locus_tag=PHA55_RS06430;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_000006806.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1321534	1322433	.	-	.	ID=gene-PHA55_RS06435;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=PHA55_RS06435;old_locus_tag=PHA55_06435
NZ_CP116044.1	Protein Homology	CDS	1321534	1322433	.	-	0	ID=cds-WP_000347235.1;Parent=gene-PHA55_RS06435;Dbxref=Genbank:WP_000347235.1;Name=WP_000347235.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414955.1;locus_tag=PHA55_RS06435;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_000347235.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1322433	1322675	.	-	.	ID=gene-PHA55_RS06440;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=PHA55_RS06440;old_locus_tag=PHA55_06440
NZ_CP116044.1	Protein Homology	CDS	1322433	1322675	.	-	0	ID=cds-WP_001124935.1;Parent=gene-PHA55_RS06440;Dbxref=Genbank:WP_001124935.1;Name=WP_001124935.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308503.1;locus_tag=PHA55_RS06440;product=exodeoxyribonuclease VII small subunit;protein_id=WP_001124935.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1322881	1324329	.	+	.	ID=gene-PHA55_RS06445;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=PHA55_RS06445;old_locus_tag=PHA55_06445
NZ_CP116044.1	Protein Homology	CDS	1322881	1324329	.	+	0	ID=cds-WP_000668685.1;Parent=gene-PHA55_RS06445;Dbxref=Genbank:WP_000668685.1;Name=WP_000668685.1;Ontology_term=GO:0006400,GO:0009228,GO:0003824;gbkey=CDS;gene=thiI;go_function=catalytic activity|0003824||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=PHA55_RS06445;product=tRNA 4-thiouridine(8) synthase ThiI;protein_id=WP_000668685.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1324383	1324973	.	-	.	ID=gene-PHA55_RS06450;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=PHA55_RS06450;old_locus_tag=PHA55_06450
NZ_CP116044.1	Protein Homology	CDS	1324383	1324973	.	-	0	ID=cds-WP_001276309.1;Parent=gene-PHA55_RS06450;Dbxref=Genbank:WP_001276309.1;Name=WP_001276309.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308505.2;locus_tag=PHA55_RS06450;product=protein deglycase YajL;protein_id=WP_001276309.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1324936	1325847	.	-	.	ID=gene-PHA55_RS06455;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=PHA55_RS06455;old_locus_tag=PHA55_06455
NZ_CP116044.1	Protein Homology	CDS	1324936	1325847	.	-	0	ID=cds-WP_000705849.1;Parent=gene-PHA55_RS06455;Dbxref=Genbank:WP_000705849.1;Name=WP_000705849.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414959.1;locus_tag=PHA55_RS06455;product=2-dehydropantoate 2-reductase;protein_id=WP_000705849.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1326015	1326506	.	+	.	ID=gene-PHA55_RS06460;Name=yajQ;gbkey=Gene;gene=yajQ;gene_biotype=protein_coding;locus_tag=PHA55_RS06460;old_locus_tag=PHA55_06460
NZ_CP116044.1	Protein Homology	CDS	1326015	1326506	.	+	0	ID=cds-WP_001138904.1;Parent=gene-PHA55_RS06460;Dbxref=Genbank:WP_001138904.1;Name=WP_001138904.1;gbkey=CDS;gene=yajQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414960.2;locus_tag=PHA55_RS06460;product=nucleotide binding protein YajQ;protein_id=WP_001138904.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1326634	1327998	.	-	.	ID=gene-PHA55_RS06465;Name=yajR;gbkey=Gene;gene=yajR;gene_biotype=protein_coding;locus_tag=PHA55_RS06465;old_locus_tag=PHA55_06465
NZ_CP116044.1	Protein Homology	CDS	1326634	1327998	.	-	0	ID=cds-WP_001000978.1;Parent=gene-PHA55_RS06465;Dbxref=Genbank:WP_001000978.1;Name=WP_001000978.1;gbkey=CDS;gene=yajR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308508.2;locus_tag=PHA55_RS06465;product=MFS transporter;protein_id=WP_001000978.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1328406	1329341	.	+	.	ID=gene-PHA55_RS06470;Name=PHA55_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS06470;old_locus_tag=PHA55_06470
NZ_CP116044.1	Protein Homology	CDS	1328406	1329341	.	+	0	ID=cds-WP_001297127.1;Parent=gene-PHA55_RS06470;Dbxref=Genbank:WP_001297127.1;Name=WP_001297127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001427098.1;locus_tag=PHA55_RS06470;product=tetratricopeptide repeat protein;protein_id=WP_001297127.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1329397	1329939	.	-	.	ID=gene-PHA55_RS06475;Name=PHA55_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS06475;old_locus_tag=PHA55_06475
NZ_CP116044.1	Protein Homology	CDS	1329397	1329939	.	-	0	ID=cds-WP_000227784.1;Parent=gene-PHA55_RS06475;Dbxref=Genbank:WP_000227784.1;Name=WP_000227784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000227782.1;locus_tag=PHA55_RS06475;product=GNAT family N-acetyltransferase;protein_id=WP_000227784.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1329923	1330234	.	-	.	ID=gene-PHA55_RS06480;Name=PHA55_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS06480;old_locus_tag=PHA55_06480
NZ_CP116044.1	Protein Homology	CDS	1329923	1330234	.	-	0	ID=cds-WP_001297137.1;Parent=gene-PHA55_RS06480;Dbxref=Genbank:WP_001297137.1;Name=WP_001297137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706319.2;locus_tag=PHA55_RS06480;product=DUF1778 domain-containing protein;protein_id=WP_001297137.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1330419	1331309	.	-	.	ID=gene-PHA55_RS06485;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=PHA55_RS06485;old_locus_tag=PHA55_06485
NZ_CP116044.1	Protein Homology	CDS	1330419	1331309	.	-	0	ID=cds-WP_000971336.1;Parent=gene-PHA55_RS06485;Dbxref=Genbank:WP_000971336.1;Name=WP_000971336.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308509.1;locus_tag=PHA55_RS06485;product=heme o synthase;protein_id=WP_000971336.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1331321	1331650	.	-	.	ID=gene-PHA55_RS06490;Name=cyoD;gbkey=Gene;gene=cyoD;gene_biotype=protein_coding;locus_tag=PHA55_RS06490;old_locus_tag=PHA55_06490
NZ_CP116044.1	Protein Homology	CDS	1331321	1331650	.	-	0	ID=cds-WP_000019869.1;Parent=gene-PHA55_RS06490;Dbxref=Genbank:WP_000019869.1;Name=WP_000019869.1;gbkey=CDS;gene=cyoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308510.1;locus_tag=PHA55_RS06490;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_000019869.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1331650	1332264	.	-	.	ID=gene-PHA55_RS06495;Name=cyoC;gbkey=Gene;gene=cyoC;gene_biotype=protein_coding;locus_tag=PHA55_RS06495;old_locus_tag=PHA55_06495
NZ_CP116044.1	Protein Homology	CDS	1331650	1332264	.	-	0	ID=cds-WP_000179819.1;Parent=gene-PHA55_RS06495;Dbxref=Genbank:WP_000179819.1;Name=WP_000179819.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;gene=cyoC;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414964.1;locus_tag=PHA55_RS06495;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_000179819.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1332254	1334245	.	-	.	ID=gene-PHA55_RS06500;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=PHA55_RS06500;old_locus_tag=PHA55_06500
NZ_CP116044.1	Protein Homology	CDS	1332254	1334245	.	-	0	ID=cds-WP_000467180.1;Parent=gene-PHA55_RS06500;Dbxref=Genbank:WP_000467180.1;Name=WP_000467180.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444673.1;locus_tag=PHA55_RS06500;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_000467180.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1334267	1335214	.	-	.	ID=gene-PHA55_RS06505;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=PHA55_RS06505;old_locus_tag=PHA55_06505
NZ_CP116044.1	Protein Homology	CDS	1334267	1335214	.	-	0	ID=cds-WP_001239440.1;Parent=gene-PHA55_RS06505;Dbxref=Genbank:WP_001239440.1;Name=WP_001239440.1;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414966.1;locus_tag=PHA55_RS06505;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WP_001239440.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1335674	1337149	.	-	.	ID=gene-PHA55_RS06510;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=PHA55_RS06510;old_locus_tag=PHA55_06510
NZ_CP116044.1	Protein Homology	CDS	1335674	1337149	.	-	0	ID=cds-WP_000098440.1;Parent=gene-PHA55_RS06510;Dbxref=Genbank:WP_000098440.1;Name=WP_000098440.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706326.1;locus_tag=PHA55_RS06510;product=muropeptide MFS transporter AmpG;protein_id=WP_000098440.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1337193	1337771	.	-	.	ID=gene-PHA55_RS06515;Name=yajG;gbkey=Gene;gene=yajG;gene_biotype=protein_coding;locus_tag=PHA55_RS06515;old_locus_tag=PHA55_06515
NZ_CP116044.1	Protein Homology	CDS	1337193	1337771	.	-	0	ID=cds-WP_001295326.1;Parent=gene-PHA55_RS06515;Dbxref=Genbank:WP_001295326.1;Name=WP_001295326.1;gbkey=CDS;gene=yajG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414968.4;locus_tag=PHA55_RS06515;product=lipoprotein;protein_id=WP_001295326.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1338076	1338393	.	+	.	ID=gene-PHA55_RS06520;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=PHA55_RS06520;old_locus_tag=PHA55_06520
NZ_CP116044.1	Protein Homology	CDS	1338076	1338393	.	+	0	ID=cds-WP_000973448.1;Parent=gene-PHA55_RS06520;Dbxref=Genbank:WP_000973448.1;Name=WP_000973448.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414969.4;locus_tag=PHA55_RS06520;product=transcriptional regulator BolA;protein_id=WP_000973448.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1338737	1340035	.	+	.	ID=gene-PHA55_RS06525;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=PHA55_RS06525;old_locus_tag=PHA55_06525
NZ_CP116044.1	Protein Homology	CDS	1338737	1340035	.	+	0	ID=cds-WP_001198386.1;Parent=gene-PHA55_RS06525;Dbxref=Genbank:WP_001198386.1;Name=WP_001198386.1;Ontology_term=GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process='de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=PHA55_RS06525;product=trigger factor;protein_id=WP_001198386.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1340281	1340904	.	+	.	ID=gene-PHA55_RS06530;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=PHA55_RS06530;old_locus_tag=PHA55_06530
NZ_CP116044.1	Protein Homology	CDS	1340281	1340904	.	+	0	ID=cds-WP_000122253.1;Parent=gene-PHA55_RS06530;Dbxref=Genbank:WP_000122253.1;Name=WP_000122253.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809880.1;locus_tag=PHA55_RS06530;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_000122253.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1341030	1342304	.	+	.	ID=gene-PHA55_RS06535;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=PHA55_RS06535;old_locus_tag=PHA55_06535
NZ_CP116044.1	Protein Homology	CDS	1341030	1342304	.	+	0	ID=cds-WP_000130305.1;Parent=gene-PHA55_RS06535;Dbxref=Genbank:WP_000130305.1;Name=WP_000130305.1;Ontology_term=GO:0006508,GO:0004252,GO:0005524,GO:0051082,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=serine-type endopeptidase activity|0004252||IEA,ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=PHA55_RS06535;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_000130305.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1342492	1344846	.	+	.	ID=gene-PHA55_RS06540;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=PHA55_RS06540;old_locus_tag=PHA55_06540
NZ_CP116044.1	Protein Homology	CDS	1342492	1344846	.	+	0	ID=cds-WP_001295325.1;Parent=gene-PHA55_RS06540;Dbxref=Genbank:WP_001295325.1;Name=WP_001295325.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1;locus_tag=PHA55_RS06540;product=endopeptidase La;protein_id=WP_001295325.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1345037	1345327	.	+	.	ID=gene-PHA55_RS06545;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=PHA55_RS06545;old_locus_tag=PHA55_06545
NZ_CP116044.1	Protein Homology	CDS	1345037	1345327	.	+	0	ID=cds-WP_254892905.1;Parent=gene-PHA55_RS06545;Dbxref=Genbank:WP_254892905.1;Name=WP_254892905.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356995.1;locus_tag=PHA55_RS06545;product=DNA-binding protein HU-beta;protein_id=WP_254892905.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1345519	1347390	.	+	.	ID=gene-PHA55_RS06550;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=PHA55_RS06550;old_locus_tag=PHA55_06550
NZ_CP116044.1	Protein Homology	CDS	1345519	1347390	.	+	0	ID=cds-WP_000969372.1;Parent=gene-PHA55_RS06550;Dbxref=Genbank:WP_000969372.1;Name=WP_000969372.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414975.1;locus_tag=PHA55_RS06550;product=peptidylprolyl isomerase;protein_id=WP_000969372.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1347541	1347912	.	+	.	ID=gene-PHA55_RS06555;Name=ybaV;gbkey=Gene;gene=ybaV;gene_biotype=protein_coding;locus_tag=PHA55_RS06555;old_locus_tag=PHA55_06555
NZ_CP116044.1	Protein Homology	CDS	1347541	1347912	.	+	0	ID=cds-WP_000680314.1;Parent=gene-PHA55_RS06555;Dbxref=Genbank:WP_000680314.1;Name=WP_000680314.1;gbkey=CDS;gene=ybaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414976.1;locus_tag=PHA55_RS06555;product=helix-hairpin-helix domain-containing protein;protein_id=WP_000680314.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1348006	1348404	.	+	.	ID=gene-PHA55_RS06560;Name=fadM;gbkey=Gene;gene=fadM;gene_biotype=protein_coding;locus_tag=PHA55_RS06560;old_locus_tag=PHA55_06560
NZ_CP116044.1	Protein Homology	CDS	1348006	1348404	.	+	0	ID=cds-WP_001194534.1;Parent=gene-PHA55_RS06560;Dbxref=Genbank:WP_001194534.1;Name=WP_001194534.1;gbkey=CDS;gene=fadM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414977.1;locus_tag=PHA55_RS06560;product=long-chain acyl-CoA thioesterase FadM;protein_id=WP_001194534.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1348456	1349151	.	-	.	ID=gene-PHA55_RS06565;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=PHA55_RS06565;old_locus_tag=PHA55_06565
NZ_CP116044.1	Protein Homology	CDS	1348456	1349151	.	-	0	ID=cds-WP_000817229.1;Parent=gene-PHA55_RS06565;Dbxref=Genbank:WP_000817229.1;Name=WP_000817229.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706338.1;locus_tag=PHA55_RS06565;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_000817229.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1349216	1350916	.	-	.	ID=gene-PHA55_RS06570;Name=ybaE;gbkey=Gene;gene=ybaE;gene_biotype=protein_coding;locus_tag=PHA55_RS06570;old_locus_tag=PHA55_06570
NZ_CP116044.1	Protein Homology	CDS	1349216	1350916	.	-	0	ID=cds-WP_001238231.1;Parent=gene-PHA55_RS06570;Dbxref=Genbank:WP_001238231.1;Name=WP_001238231.1;gbkey=CDS;gene=ybaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308526.1;locus_tag=PHA55_RS06570;product=SgrR family transcriptional regulator;protein_id=WP_001238231.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1351016	1351834	.	+	.	ID=gene-PHA55_RS06575;Name=cof;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=PHA55_RS06575;old_locus_tag=PHA55_06575
NZ_CP116044.1	Protein Homology	CDS	1351016	1351834	.	+	0	ID=cds-WP_000113027.1;Parent=gene-PHA55_RS06575;Dbxref=Genbank:WP_000113027.1;Name=WP_000113027.1;Ontology_term=GO:0016818;gbkey=CDS;gene=cof;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414980.2;locus_tag=PHA55_RS06575;product=HMP-PP phosphatase;protein_id=WP_000113027.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1351987	1352445	.	+	.	ID=gene-PHA55_RS06580;Name=decR;gbkey=Gene;gene=decR;gene_biotype=protein_coding;locus_tag=PHA55_RS06580;old_locus_tag=PHA55_06580
NZ_CP116044.1	Protein Homology	CDS	1351987	1352445	.	+	0	ID=cds-WP_000884589.1;Parent=gene-PHA55_RS06580;Dbxref=Genbank:WP_000884589.1;Name=WP_000884589.1;gbkey=CDS;gene=decR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308528.2;locus_tag=PHA55_RS06580;product=DNA-binding transcriptional regulator DecR;protein_id=WP_000884589.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1352475	1354247	.	+	.	ID=gene-PHA55_RS06585;Name=mdlA;gbkey=Gene;gene=mdlA;gene_biotype=protein_coding;locus_tag=PHA55_RS06585;old_locus_tag=PHA55_06585
NZ_CP116044.1	Protein Homology	CDS	1352475	1354247	.	+	0	ID=cds-WP_001235579.1;Parent=gene-PHA55_RS06585;Dbxref=Genbank:WP_001235579.1;Name=WP_001235579.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=mdlA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706342.1;locus_tag=PHA55_RS06585;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_001235579.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1354240	1356021	.	+	.	ID=gene-PHA55_RS06590;Name=mdlB;gbkey=Gene;gene=mdlB;gene_biotype=protein_coding;locus_tag=PHA55_RS06590;old_locus_tag=PHA55_06590
NZ_CP116044.1	Protein Homology	CDS	1354240	1356021	.	+	0	ID=cds-WP_001256180.1;Parent=gene-PHA55_RS06590;Dbxref=Genbank:WP_001256180.1;Name=WP_001256180.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=mdlB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308530.1;locus_tag=PHA55_RS06590;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=WP_001256180.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1356202	1356540	.	+	.	ID=gene-PHA55_RS06595;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=PHA55_RS06595;old_locus_tag=PHA55_06595
NZ_CP116044.1	Protein Homology	CDS	1356202	1356540	.	+	0	ID=cds-WP_000780338.1;Parent=gene-PHA55_RS06595;Dbxref=Genbank:WP_000780338.1;Name=WP_000780338.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308531.1;locus_tag=PHA55_RS06595;product=P-II family nitrogen regulator;protein_id=WP_000780338.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1356570	1357856	.	+	.	ID=gene-PHA55_RS06600;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=PHA55_RS06600;old_locus_tag=PHA55_06600
NZ_CP116044.1	Protein Homology	CDS	1356570	1357856	.	+	0	ID=cds-WP_000685029.1;Parent=gene-PHA55_RS06600;Dbxref=Genbank:WP_000685029.1;Name=WP_000685029.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium transmembrane transporter activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308532.1;locus_tag=PHA55_RS06600;product=ammonium transporter AmtB;protein_id=WP_000685029.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1357905	1358765	.	-	.	ID=gene-PHA55_RS06605;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=PHA55_RS06605;old_locus_tag=PHA55_06605
NZ_CP116044.1	Protein Homology	CDS	1357905	1358765	.	-	0	ID=cds-WP_000075876.1;Parent=gene-PHA55_RS06605;Dbxref=Genbank:WP_000075876.1;Name=WP_000075876.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308533.1;locus_tag=PHA55_RS06605;product=acyl-CoA thioesterase II;protein_id=WP_000075876.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1358983	1359555	.	+	.	ID=gene-PHA55_RS06610;Name=ybaY;gbkey=Gene;gene=ybaY;gene_biotype=protein_coding;locus_tag=PHA55_RS06610;old_locus_tag=PHA55_06610
NZ_CP116044.1	Protein Homology	CDS	1358983	1359555	.	+	0	ID=cds-WP_000779826.1;Parent=gene-PHA55_RS06610;Dbxref=Genbank:WP_000779826.1;Name=WP_000779826.1;gbkey=CDS;gene=ybaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706347.1;locus_tag=PHA55_RS06610;product=YbaY family lipoprotein;protein_id=WP_000779826.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1359586	1359897	.	-	.	ID=gene-PHA55_RS06615;Name=PHA55_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS06615;old_locus_tag=PHA55_06615
NZ_CP116044.1	Protein Homology	CDS	1359586	1359897	.	-	0	ID=cds-WP_000409911.1;Parent=gene-PHA55_RS06615;Dbxref=Genbank:WP_000409911.1;Name=WP_000409911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706349.2;locus_tag=PHA55_RS06615;product=MGMT family protein;protein_id=WP_000409911.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1360060	1360156	.	+	.	ID=gene-PHA55_RS06620;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=PHA55_RS06620;old_locus_tag=PHA55_06620
NZ_CP116044.1	cmsearch	SRP_RNA	1360060	1360156	.	+	.	ID=rna-PHA55_RS06620;Parent=gene-PHA55_RS06620;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS06620;product=signal recognition particle sRNA small type
NZ_CP116044.1	cmsearch	exon	1360060	1360156	.	+	.	ID=exon-PHA55_RS06620-1;Parent=rna-PHA55_RS06620;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS06620;product=signal recognition particle sRNA small type
NZ_CP116044.1	RefSeq	gene	1360276	1360629	.	+	.	ID=gene-PHA55_RS06625;Name=ybaA;gbkey=Gene;gene=ybaA;gene_biotype=protein_coding;locus_tag=PHA55_RS06625;old_locus_tag=PHA55_06625
NZ_CP116044.1	Protein Homology	CDS	1360276	1360629	.	+	0	ID=cds-WP_271287507.1;Parent=gene-PHA55_RS06625;Dbxref=Genbank:WP_271287507.1;Name=WP_271287507.1;gbkey=CDS;gene=ybaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308536.1;locus_tag=PHA55_RS06625;product=DUF1428 family protein;protein_id=WP_271287507.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1360671	1362221	.	-	.	ID=gene-PHA55_RS06630;Name=pdeB;gbkey=Gene;gene=pdeB;gene_biotype=protein_coding;locus_tag=PHA55_RS06630;old_locus_tag=PHA55_06630
NZ_CP116044.1	Protein Homology	CDS	1360671	1362221	.	-	0	ID=cds-WP_001299455.1;Parent=gene-PHA55_RS06630;Dbxref=Genbank:WP_001299455.1;Name=WP_001299455.1;gbkey=CDS;gene=pdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308537.2;locus_tag=PHA55_RS06630;product=cyclic-guanylate-specific phosphodiesterase PdeB;protein_id=WP_001299455.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1362385	1362855	.	-	.	ID=gene-PHA55_RS06635;Name=ylaC;gbkey=Gene;gene=ylaC;gene_biotype=protein_coding;locus_tag=PHA55_RS06635;old_locus_tag=PHA55_06635
NZ_CP116044.1	Protein Homology	CDS	1362385	1362855	.	-	0	ID=cds-WP_000136192.1;Parent=gene-PHA55_RS06635;Dbxref=Genbank:WP_000136192.1;Name=WP_000136192.1;gbkey=CDS;gene=ylaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308538.2;locus_tag=PHA55_RS06635;product=YlaC family protein;protein_id=WP_000136192.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1362971	1363522	.	-	.	ID=gene-PHA55_RS06640;Name=maa;gbkey=Gene;gene=maa;gene_biotype=protein_coding;locus_tag=PHA55_RS06640;old_locus_tag=PHA55_06640
NZ_CP116044.1	Protein Homology	CDS	1362971	1363522	.	-	0	ID=cds-WP_000102568.1;Parent=gene-PHA55_RS06640;Dbxref=Genbank:WP_000102568.1;Name=WP_000102568.1;Ontology_term=GO:0016407;gbkey=CDS;gene=maa;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414992.1;locus_tag=PHA55_RS06640;product=maltose O-acetyltransferase;protein_id=WP_000102568.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1363694	1363912	.	-	.	ID=gene-PHA55_RS06645;Name=hha;gbkey=Gene;gene=hha;gene_biotype=protein_coding;locus_tag=PHA55_RS06645;old_locus_tag=PHA55_06645
NZ_CP116044.1	Protein Homology	CDS	1363694	1363912	.	-	0	ID=cds-WP_001291435.1;Parent=gene-PHA55_RS06645;Dbxref=Genbank:WP_001291435.1;Name=WP_001291435.1;gbkey=CDS;gene=hha;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308540.1;locus_tag=PHA55_RS06645;product=HHA domain-containing protein;protein_id=WP_001291435.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1363938	1364312	.	-	.	ID=gene-PHA55_RS06650;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=PHA55_RS06650;old_locus_tag=PHA55_06650
NZ_CP116044.1	Protein Homology	CDS	1363938	1364312	.	-	0	ID=cds-WP_000344800.1;Parent=gene-PHA55_RS06650;Dbxref=Genbank:WP_000344800.1;Name=WP_000344800.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741190.1;locus_tag=PHA55_RS06650;product=Hha toxicity modulator TomB;protein_id=WP_000344800.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1364858	1368007	.	-	.	ID=gene-PHA55_RS06655;Name=acrB;gbkey=Gene;gene=acrB;gene_biotype=protein_coding;locus_tag=PHA55_RS06655;old_locus_tag=PHA55_06655
NZ_CP116044.1	Protein Homology	CDS	1364858	1368007	.	-	0	ID=cds-WP_001132469.1;Parent=gene-PHA55_RS06655;Dbxref=Genbank:WP_001132469.1;Name=WP_001132469.1;gbkey=CDS;gene=acrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414995.1;locus_tag=PHA55_RS06655;product=efflux RND transporter permease AcrB;protein_id=WP_001132469.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1368030	1369223	.	-	.	ID=gene-PHA55_RS06660;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=PHA55_RS06660;old_locus_tag=PHA55_06660
NZ_CP116044.1	Protein Homology	CDS	1368030	1369223	.	-	0	ID=cds-WP_001295324.1;Parent=gene-PHA55_RS06660;Dbxref=Genbank:WP_001295324.1;Name=WP_001295324.1;gbkey=CDS;gene=acrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308543.1;locus_tag=PHA55_RS06660;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;protein_id=WP_001295324.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1369365	1370012	.	+	.	ID=gene-PHA55_RS06665;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=PHA55_RS06665;old_locus_tag=PHA55_06665
NZ_CP116044.1	Protein Homology	CDS	1369365	1370012	.	+	0	ID=cds-WP_000101737.1;Parent=gene-PHA55_RS06665;Dbxref=Genbank:WP_000101737.1;Name=WP_000101737.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414997.1;locus_tag=PHA55_RS06665;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WP_000101737.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1370140	1373502	.	+	.	ID=gene-PHA55_RS06670;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=PHA55_RS06670;old_locus_tag=PHA55_06670
NZ_CP116044.1	Protein Homology	CDS	1370140	1373502	.	+	0	ID=cds-WP_000177735.1;Parent=gene-PHA55_RS06670;Dbxref=Genbank:WP_000177735.1;Name=WP_000177735.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414998.1;locus_tag=PHA55_RS06670;product=mechanosensitive channel MscK;protein_id=WP_000177735.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	1373563	1373661	.	+	.	ID=gene-PHA55_RS06675;Name=PHA55_RS06675;end_range=1373661,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS06675;old_locus_tag=PHA55_06675;partial=true;pseudo=true;start_range=.,1373563
NZ_CP116044.1	Protein Homology	CDS	1373563	1373661	.	+	0	ID=cds-PHA55_RS06675;Parent=gene-PHA55_RS06675;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1373661,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518748.2;locus_tag=PHA55_RS06675;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1373563;transl_table=11
NZ_CP116044.1	RefSeq	gene	1373714	1373875	.	-	.	ID=gene-PHA55_RS06680;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=PHA55_RS06680;old_locus_tag=PHA55_06680
NZ_CP116044.1	Protein Homology	CDS	1373714	1373875	.	-	0	ID=cds-WP_000051146.1;Parent=gene-PHA55_RS06680;Dbxref=Genbank:WP_000051146.1;Name=WP_000051146.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414999.1;locus_tag=PHA55_RS06680;product=pleiotropic regulatory protein RsmS;protein_id=WP_000051146.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1373889	1374416	.	-	.	ID=gene-PHA55_RS06685;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=PHA55_RS06685;old_locus_tag=PHA55_06685
NZ_CP116044.1	Protein Homology	CDS	1373889	1374416	.	-	0	ID=cds-WP_000844848.1;Parent=gene-PHA55_RS06685;Dbxref=Genbank:WP_000844848.1;Name=WP_000844848.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415000.1;locus_tag=PHA55_RS06685;product=primosomal replication protein N'';protein_id=WP_000844848.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1374486	1374863	.	+	.	ID=gene-PHA55_RS06690;Name=ybaN;gbkey=Gene;gene=ybaN;gene_biotype=protein_coding;locus_tag=PHA55_RS06690;old_locus_tag=PHA55_06690
NZ_CP116044.1	Protein Homology	CDS	1374486	1374863	.	+	0	ID=cds-WP_001188905.1;Parent=gene-PHA55_RS06690;Dbxref=Genbank:WP_001188905.1;Name=WP_001188905.1;gbkey=CDS;gene=ybaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308548.1;locus_tag=PHA55_RS06690;product=DUF454 family protein;protein_id=WP_001188905.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1375016	1375567	.	+	.	ID=gene-PHA55_RS06695;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=PHA55_RS06695;old_locus_tag=PHA55_06695
NZ_CP116044.1	Protein Homology	CDS	1375016	1375567	.	+	0	ID=cds-WP_000127356.1;Parent=gene-PHA55_RS06695;Dbxref=Genbank:WP_000127356.1;Name=WP_000127356.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=PHA55_RS06695;product=adenine phosphoribosyltransferase;protein_id=WP_000127356.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1375696	1377627	.	+	.	ID=gene-PHA55_RS06700;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=PHA55_RS06700;old_locus_tag=PHA55_06700
NZ_CP116044.1	Protein Homology	CDS	1375696	1377627	.	+	0	ID=cds-WP_000122008.1;Parent=gene-PHA55_RS06700;Dbxref=Genbank:WP_000122008.1;Name=WP_000122008.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308550.1;locus_tag=PHA55_RS06700;product=DNA polymerase III subunit gamma/tau;protein_id=WP_000122008.1;transl_table=11
NZ_CP116044.1	cmsearch	sequence_feature	1376960	1377024	.	+	.	ID=id-PHA55_RS06700;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS06700
NZ_CP116044.1	RefSeq	gene	1377680	1378009	.	+	.	ID=gene-PHA55_RS06705;Name=ybaB;gbkey=Gene;gene=ybaB;gene_biotype=protein_coding;locus_tag=PHA55_RS06705;old_locus_tag=PHA55_06705
NZ_CP116044.1	Protein Homology	CDS	1377680	1378009	.	+	0	ID=cds-WP_000467098.1;Parent=gene-PHA55_RS06705;Dbxref=Genbank:WP_000467098.1;Name=WP_000467098.1;Ontology_term=GO:0008150,GO:0003677,GO:0005737;gbkey=CDS;gene=ybaB;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=PHA55_RS06705;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_000467098.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1378009	1378614	.	+	.	ID=gene-PHA55_RS06710;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=PHA55_RS06710;old_locus_tag=PHA55_06710
NZ_CP116044.1	Protein Homology	CDS	1378009	1378614	.	+	0	ID=cds-WP_039264376.1;Parent=gene-PHA55_RS06710;Dbxref=Genbank:WP_039264376.1;Name=WP_039264376.1;Ontology_term=GO:0006281,GO:0006310;gbkey=CDS;gene=recR;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308552.1;locus_tag=PHA55_RS06710;product=recombination mediator RecR;protein_id=WP_039264376.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1378724	1380598	.	+	.	ID=gene-PHA55_RS06715;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=PHA55_RS06715;old_locus_tag=PHA55_06715
NZ_CP116044.1	Protein Homology	CDS	1378724	1380598	.	+	0	ID=cds-WP_000678208.1;Parent=gene-PHA55_RS06715;Dbxref=Genbank:WP_000678208.1;Name=WP_000678208.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=PHA55_RS06715;product=molecular chaperone HtpG;protein_id=WP_000678208.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1380779	1381423	.	+	.	ID=gene-PHA55_RS06720;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=PHA55_RS06720;old_locus_tag=PHA55_06720
NZ_CP116044.1	Protein Homology	CDS	1380779	1381423	.	+	0	ID=cds-WP_001220233.1;Parent=gene-PHA55_RS06720;Dbxref=Genbank:WP_001220233.1;Name=WP_001220233.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=adenylate kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706188.1;locus_tag=PHA55_RS06720;product=adenylate kinase;protein_id=WP_001220233.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1381659	1382621	.	+	.	ID=gene-PHA55_RS06725;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=PHA55_RS06725;old_locus_tag=PHA55_06725
NZ_CP116044.1	Protein Homology	CDS	1381659	1382621	.	+	0	ID=cds-WP_001250088.1;Parent=gene-PHA55_RS06725;Dbxref=Genbank:WP_001250088.1;Name=WP_001250088.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308555.1;locus_tag=PHA55_RS06725;product=ferrochelatase;protein_id=WP_001250088.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1382618	1383577	.	-	.	ID=gene-PHA55_RS06730;Name=aes;gbkey=Gene;gene=aes;gene_biotype=protein_coding;locus_tag=PHA55_RS06730;old_locus_tag=PHA55_06730
NZ_CP116044.1	Protein Homology	CDS	1382618	1383577	.	-	0	ID=cds-WP_000801832.1;Parent=gene-PHA55_RS06730;Dbxref=Genbank:WP_000801832.1;Name=WP_000801832.1;Ontology_term=GO:0016787;gbkey=CDS;gene=aes;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415009.1;locus_tag=PHA55_RS06730;product=acetyl esterase;protein_id=WP_000801832.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1383729	1385033	.	+	.	ID=gene-PHA55_RS06735;Name=gsk;gbkey=Gene;gene=gsk;gene_biotype=protein_coding;locus_tag=PHA55_RS06735;old_locus_tag=PHA55_06735
NZ_CP116044.1	Protein Homology	CDS	1383729	1385033	.	+	0	ID=cds-WP_000671574.1;Parent=gene-PHA55_RS06735;Dbxref=Genbank:WP_000671574.1;Name=WP_000671574.1;gbkey=CDS;gene=gsk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308557.1;locus_tag=PHA55_RS06735;product=inosine/guanosine kinase;protein_id=WP_000671574.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1385166	1386842	.	-	.	ID=gene-PHA55_RS06740;Name=ybaL;gbkey=Gene;gene=ybaL;gene_biotype=protein_coding;locus_tag=PHA55_RS06740;old_locus_tag=PHA55_06740
NZ_CP116044.1	Protein Homology	CDS	1385166	1386842	.	-	0	ID=cds-WP_000546228.1;Parent=gene-PHA55_RS06740;Dbxref=Genbank:WP_000546228.1;Name=WP_000546228.1;Ontology_term=GO:0006813,GO:0008324,GO:0051139,GO:0016020;gbkey=CDS;gene=ybaL;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308558.1;locus_tag=PHA55_RS06740;product=YbaL family putative K(+) efflux transporter;protein_id=WP_000546228.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1387080	1388300	.	-	.	ID=gene-PHA55_RS06745;Name=fsr;gbkey=Gene;gene=fsr;gene_biotype=protein_coding;locus_tag=PHA55_RS06745;old_locus_tag=PHA55_06745
NZ_CP116044.1	Protein Homology	CDS	1387080	1388300	.	-	0	ID=cds-WP_001251608.1;Parent=gene-PHA55_RS06745;Dbxref=Genbank:WP_001251608.1;Name=WP_001251608.1;gbkey=CDS;gene=fsr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415012.1;locus_tag=PHA55_RS06745;product=fosmidomycin MFS transporter;protein_id=WP_001251608.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1388518	1390170	.	+	.	ID=gene-PHA55_RS06750;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=PHA55_RS06750;old_locus_tag=PHA55_06750
NZ_CP116044.1	Protein Homology	CDS	1388518	1390170	.	+	0	ID=cds-WP_000771768.1;Parent=gene-PHA55_RS06750;Dbxref=Genbank:WP_000771768.1;Name=WP_000771768.1;gbkey=CDS;gene=ushA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415013.1;locus_tag=PHA55_RS06750;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase;protein_id=WP_000771768.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1390207	1390686	.	-	.	ID=gene-PHA55_RS06755;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=PHA55_RS06755;old_locus_tag=PHA55_06755
NZ_CP116044.1	Protein Homology	CDS	1390207	1390686	.	-	0	ID=cds-WP_000186631.1;Parent=gene-PHA55_RS06755;Dbxref=Genbank:WP_000186631.1;Name=WP_000186631.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA editing activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=PHA55_RS06755;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WP_000186631.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1390890	1391684	.	-	.	ID=gene-PHA55_RS06760;Name=ybaP;gbkey=Gene;gene=ybaP;gene_biotype=protein_coding;locus_tag=PHA55_RS06760;old_locus_tag=PHA55_06760
NZ_CP116044.1	Protein Homology	CDS	1390890	1391684	.	-	0	ID=cds-WP_000365181.1;Parent=gene-PHA55_RS06760;Dbxref=Genbank:WP_000365181.1;Name=WP_000365181.1;gbkey=CDS;gene=ybaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415015.1;locus_tag=PHA55_RS06760;product=TraB/GumN family protein;protein_id=WP_000365181.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	1391822	1392162	.	+	.	ID=gene-PHA55_RS06765;Name=ybaQ;gbkey=Gene;gene=ybaQ;gene_biotype=pseudogene;locus_tag=PHA55_RS06765;old_locus_tag=PHA55_06765;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	1391822	1392162	.	+	0	ID=cds-PHA55_RS06765;Parent=gene-PHA55_RS06765;Note=frameshifted;Ontology_term=GO:0003677;gbkey=CDS;gene=ybaQ;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415016.4;locus_tag=PHA55_RS06765;product=HigA family addiction module antitoxin;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	1392276	1394780	.	-	.	ID=gene-PHA55_RS06770;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=PHA55_RS06770;old_locus_tag=PHA55_06770
NZ_CP116044.1	Protein Homology	CDS	1392276	1394780	.	-	0	ID=cds-WP_000078269.1;Parent=gene-PHA55_RS06770;Dbxref=Genbank:WP_000078269.1;Name=WP_000078269.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415017.1;locus_tag=PHA55_RS06770;product=copper-exporting P-type ATPase CopA;protein_id=WP_000078269.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1395042	1395974	.	+	.	ID=gene-PHA55_RS06775;Name=glsA;gbkey=Gene;gene=glsA;gene_biotype=protein_coding;locus_tag=PHA55_RS06775;old_locus_tag=PHA55_06775
NZ_CP116044.1	Protein Homology	CDS	1395042	1395974	.	+	0	ID=cds-WP_000883016.1;Parent=gene-PHA55_RS06775;Dbxref=Genbank:WP_000883016.1;Name=WP_000883016.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsA;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415018.1;locus_tag=PHA55_RS06775;product=glutaminase A;protein_id=WP_000883016.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1395977	1397269	.	+	.	ID=gene-PHA55_RS06780;Name=ybaT;gbkey=Gene;gene=ybaT;gene_biotype=protein_coding;locus_tag=PHA55_RS06780;old_locus_tag=PHA55_06780
NZ_CP116044.1	Protein Homology	CDS	1395977	1397269	.	+	0	ID=cds-WP_000982172.1;Parent=gene-PHA55_RS06780;Dbxref=Genbank:WP_000982172.1;Name=WP_000982172.1;gbkey=CDS;gene=ybaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415019.1;locus_tag=PHA55_RS06780;product=APC family permease;protein_id=WP_000982172.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	1397300	1397397	.	+	.	ID=gene-PHA55_RS06785;Name=PHA55_RS06785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS06785;old_locus_tag=PHA55_06785;partial=true;pseudo=true;start_range=.,1397300
NZ_CP116044.1	Protein Homology	CDS	1397300	1397397	.	+	0	ID=cds-PHA55_RS06785;Parent=gene-PHA55_RS06785;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308571.1;locus_tag=PHA55_RS06785;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1397300;transl_table=11
NZ_CP116044.1	RefSeq	gene	1397394	1397801	.	+	.	ID=gene-PHA55_RS06790;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=PHA55_RS06790;old_locus_tag=PHA55_06790
NZ_CP116044.1	Protein Homology	CDS	1397394	1397801	.	+	0	ID=cds-WP_001026747.1;Parent=gene-PHA55_RS06790;Dbxref=Genbank:WP_001026747.1;Name=WP_001026747.1;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415020.1;locus_tag=PHA55_RS06790;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_001026747.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1397802	1398260	.	-	.	ID=gene-PHA55_RS06795;Name=ybbJ;gbkey=Gene;gene=ybbJ;gene_biotype=protein_coding;locus_tag=PHA55_RS06795;old_locus_tag=PHA55_06795
NZ_CP116044.1	Protein Homology	CDS	1397802	1398260	.	-	0	ID=cds-WP_000970323.1;Parent=gene-PHA55_RS06795;Dbxref=Genbank:WP_000970323.1;Name=WP_000970323.1;gbkey=CDS;gene=ybbJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415021.2;locus_tag=PHA55_RS06795;product=NfeD family protein;protein_id=WP_000970323.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1398257	1399174	.	-	.	ID=gene-PHA55_RS06800;Name=qmcA;gbkey=Gene;gene=qmcA;gene_biotype=protein_coding;locus_tag=PHA55_RS06800;old_locus_tag=PHA55_06800
NZ_CP116044.1	Protein Homology	CDS	1398257	1399174	.	-	0	ID=cds-WP_000904502.1;Parent=gene-PHA55_RS06800;Dbxref=Genbank:WP_000904502.1;Name=WP_000904502.1;gbkey=CDS;gene=qmcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308579.1;locus_tag=PHA55_RS06800;product=SPFH/Band 7/PHB domain protein;protein_id=WP_000904502.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1399320	1399997	.	+	.	ID=gene-PHA55_RS06805;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;locus_tag=PHA55_RS06805;old_locus_tag=PHA55_06805
NZ_CP116044.1	Protein Homology	CDS	1399320	1399997	.	+	0	ID=cds-WP_001157535.1;Parent=gene-PHA55_RS06805;Dbxref=Genbank:WP_001157535.1;Name=WP_001157535.1;gbkey=CDS;gene=fetA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308580.1;locus_tag=PHA55_RS06805;product=iron ABC transporter ATP-binding protein FetA;protein_id=WP_001157535.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1399984	1400763	.	+	.	ID=gene-PHA55_RS06810;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=PHA55_RS06810;old_locus_tag=PHA55_06810
NZ_CP116044.1	Protein Homology	CDS	1399984	1400763	.	+	0	ID=cds-WP_001297299.1;Parent=gene-PHA55_RS06810;Dbxref=Genbank:WP_001297299.1;Name=WP_001297299.1;gbkey=CDS;gene=fetB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308581.2;locus_tag=PHA55_RS06810;product=iron export ABC transporter permease subunit FetB;protein_id=WP_001297299.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1400826	1401680	.	-	.	ID=gene-PHA55_RS06815;Name=cnoX;gbkey=Gene;gene=cnoX;gene_biotype=protein_coding;locus_tag=PHA55_RS06815;old_locus_tag=PHA55_06815
NZ_CP116044.1	Protein Homology	CDS	1400826	1401680	.	-	0	ID=cds-WP_001295322.1;Parent=gene-PHA55_RS06815;Dbxref=Genbank:WP_001295322.1;Name=WP_001295322.1;gbkey=CDS;gene=cnoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308582.2;locus_tag=PHA55_RS06815;product=chaperedoxin;protein_id=WP_001295322.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1401741	1402550	.	-	.	ID=gene-PHA55_RS06820;Name=ybbO;gbkey=Gene;gene=ybbO;gene_biotype=protein_coding;locus_tag=PHA55_RS06820;old_locus_tag=PHA55_06820
NZ_CP116044.1	Protein Homology	CDS	1401741	1402550	.	-	0	ID=cds-WP_000148941.1;Parent=gene-PHA55_RS06820;Dbxref=Genbank:WP_000148941.1;Name=WP_000148941.1;gbkey=CDS;gene=ybbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415026.1;locus_tag=PHA55_RS06820;product=NADP(+)-dependent aldehyde reductase;protein_id=WP_000148941.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1402540	1403163	.	-	.	ID=gene-PHA55_RS06825;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=PHA55_RS06825;old_locus_tag=PHA55_06825
NZ_CP116044.1	Protein Homology	CDS	1402540	1403163	.	-	0	ID=cds-WP_001295836.1;Parent=gene-PHA55_RS06825;Dbxref=Genbank:WP_001295836.1;Name=WP_001295836.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225520.1;locus_tag=PHA55_RS06825;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WP_001295836.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1403134	1403820	.	+	.	ID=gene-PHA55_RS06830;Name=ybbA;gbkey=Gene;gene=ybbA;gene_biotype=protein_coding;locus_tag=PHA55_RS06830;old_locus_tag=PHA55_06830
NZ_CP116044.1	Protein Homology	CDS	1403134	1403820	.	+	0	ID=cds-WP_001110573.1;Parent=gene-PHA55_RS06830;Dbxref=Genbank:WP_001110573.1;Name=WP_001110573.1;gbkey=CDS;gene=ybbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415028.1;locus_tag=PHA55_RS06830;product=ABC transporter ATP-binding protein;protein_id=WP_001110573.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1403817	1406231	.	+	.	ID=gene-PHA55_RS06835;Name=ybbP;gbkey=Gene;gene=ybbP;gene_biotype=protein_coding;locus_tag=PHA55_RS06835;old_locus_tag=PHA55_06835
NZ_CP116044.1	Protein Homology	CDS	1403817	1406231	.	+	0	ID=cds-WP_000561899.1;Parent=gene-PHA55_RS06835;Dbxref=Genbank:WP_000561899.1;Name=WP_000561899.1;gbkey=CDS;gene=ybbP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415029.1;locus_tag=PHA55_RS06835;product=ABC transporter permease;protein_id=WP_000561899.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1406661	1410950	.	+	.	ID=gene-PHA55_RS06840;Name=rhsD;gbkey=Gene;gene=rhsD;gene_biotype=protein_coding;locus_tag=PHA55_RS06840;old_locus_tag=PHA55_06840
NZ_CP116044.1	Protein Homology	CDS	1406661	1410950	.	+	0	ID=cds-WP_069903576.1;Parent=gene-PHA55_RS06840;Dbxref=Genbank:WP_069903576.1;Name=WP_069903576.1;gbkey=CDS;gene=rhsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415030.1;locus_tag=PHA55_RS06840;product=rhs element protein RhsD;protein_id=WP_069903576.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1410990	1411358	.	+	.	ID=gene-PHA55_RS06845;Name=ybbC;gbkey=Gene;gene=ybbC;gene_biotype=protein_coding;locus_tag=PHA55_RS06845;old_locus_tag=PHA55_06845
NZ_CP116044.1	Protein Homology	CDS	1410990	1411358	.	+	0	ID=cds-WP_000877768.1;Parent=gene-PHA55_RS06845;Dbxref=Genbank:WP_000877768.1;Name=WP_000877768.1;gbkey=CDS;gene=ybbC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415031.1;locus_tag=PHA55_RS06845;product=YbbC/YhhH family protein;protein_id=WP_000877768.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	1411361	1412069	.	+	.	ID=gene-PHA55_RS06850;Name=PHA55_RS06850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS06850;old_locus_tag=PHA55_06850;partial=true;pseudo=true;start_range=.,1411361
NZ_CP116044.1	Protein Homology	CDS	1411361	1412069	.	+	0	ID=cds-PHA55_RS06850;Parent=gene-PHA55_RS06850;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308587.2;locus_tag=PHA55_RS06850;partial=true;product=RHS domain-containing protein;pseudo=true;start_range=.,1411361;transl_table=11
NZ_CP116044.1	RefSeq	gene	1412050	1412541	.	+	.	ID=gene-PHA55_RS06855;Name=PHA55_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS06855;old_locus_tag=PHA55_06855
NZ_CP116044.1	Protein Homology	CDS	1412050	1412541	.	+	0	ID=cds-WP_000879785.1;Parent=gene-PHA55_RS06855;Dbxref=Genbank:WP_000879785.1;Name=WP_000879785.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF011298.0;locus_tag=PHA55_RS06855;product=hypothetical protein;protein_id=WP_000879785.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	1413062	1413427	.	-	.	ID=gene-PHA55_RS06860;Name=ylbG;gbkey=Gene;gene=ylbG;gene_biotype=pseudogene;locus_tag=PHA55_RS06860;old_locus_tag=PHA55_06860;partial=true;pseudo=true;start_range=.,1413062
NZ_CP116044.1	Protein Homology	CDS	1413062	1413427	.	-	0	ID=cds-PHA55_RS06860;Parent=gene-PHA55_RS06860;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=ylbG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=PHA55_RS06860;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,1413062;transl_table=11
NZ_CP116044.1	RefSeq	gene	1413543	1414637	.	-	.	ID=gene-PHA55_RS06865;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=PHA55_RS06865;old_locus_tag=PHA55_06865
NZ_CP116044.1	Protein Homology	CDS	1413543	1414637	.	-	0	ID=cds-WP_001158004.1;Parent=gene-PHA55_RS06865;Dbxref=Genbank:WP_001158004.1;Name=WP_001158004.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308591.1;locus_tag=PHA55_RS06865;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WP_001158004.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1414706	1415632	.	-	.	ID=gene-PHA55_RS06870;Name=allS;gbkey=Gene;gene=allS;gene_biotype=protein_coding;locus_tag=PHA55_RS06870;old_locus_tag=PHA55_06870
NZ_CP116044.1	Protein Homology	CDS	1414706	1415632	.	-	0	ID=cds-WP_000460145.1;Parent=gene-PHA55_RS06870;Dbxref=Genbank:WP_000460145.1;Name=WP_000460145.1;gbkey=CDS;gene=allS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308592.1;locus_tag=PHA55_RS06870;product=HTH-type transcriptional activator AllS;protein_id=WP_000460145.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1415862	1416344	.	+	.	ID=gene-PHA55_RS06875;Name=allA;gbkey=Gene;gene=allA;gene_biotype=protein_coding;locus_tag=PHA55_RS06875;old_locus_tag=PHA55_06875
NZ_CP116044.1	Protein Homology	CDS	1415862	1416344	.	+	0	ID=cds-WP_000776388.1;Parent=gene-PHA55_RS06875;Dbxref=Genbank:WP_000776388.1;Name=WP_000776388.1;gbkey=CDS;gene=allA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308593.1;locus_tag=PHA55_RS06875;product=ureidoglycolate lyase;protein_id=WP_000776388.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1416422	1417237	.	+	.	ID=gene-PHA55_RS06880;Name=allR;gbkey=Gene;gene=allR;gene_biotype=protein_coding;locus_tag=PHA55_RS06880;old_locus_tag=PHA55_06880
NZ_CP116044.1	Protein Homology	CDS	1416422	1417237	.	+	0	ID=cds-WP_000141276.1;Parent=gene-PHA55_RS06880;Dbxref=Genbank:WP_000141276.1;Name=WP_000141276.1;gbkey=CDS;gene=allR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308594.1;locus_tag=PHA55_RS06880;product=HTH-type transcriptional repressor AllR;protein_id=WP_000141276.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1417327	1419108	.	+	.	ID=gene-PHA55_RS06885;Name=gcl;gbkey=Gene;gene=gcl;gene_biotype=protein_coding;locus_tag=PHA55_RS06885;old_locus_tag=PHA55_06885
NZ_CP116044.1	Protein Homology	CDS	1417327	1419108	.	+	0	ID=cds-WP_001342079.1;Parent=gene-PHA55_RS06885;Dbxref=Genbank:WP_001342079.1;Name=WP_001342079.1;Ontology_term=GO:0009028;gbkey=CDS;gene=gcl;go_function=tartronate-semialdehyde synthase activity|0009028||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308595.1;locus_tag=PHA55_RS06885;product=glyoxylate carboligase;protein_id=WP_001342079.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1419121	1419897	.	+	.	ID=gene-PHA55_RS06890;Name=hyi;gbkey=Gene;gene=hyi;gene_biotype=protein_coding;locus_tag=PHA55_RS06890;old_locus_tag=PHA55_06890
NZ_CP116044.1	Protein Homology	CDS	1419121	1419897	.	+	0	ID=cds-WP_000943556.1;Parent=gene-PHA55_RS06890;Dbxref=Genbank:WP_000943556.1;Name=WP_000943556.1;gbkey=CDS;gene=hyi;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308596.1;locus_tag=PHA55_RS06890;product=hydroxypyruvate isomerase;protein_id=WP_000943556.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1419997	1420875	.	+	.	ID=gene-PHA55_RS06895;Name=glxR;gbkey=Gene;gene=glxR;gene_biotype=protein_coding;locus_tag=PHA55_RS06895;old_locus_tag=PHA55_06895
NZ_CP116044.1	Protein Homology	CDS	1419997	1420875	.	+	0	ID=cds-WP_000765839.1;Parent=gene-PHA55_RS06895;Dbxref=Genbank:WP_000765839.1;Name=WP_000765839.1;Ontology_term=GO:0046487,GO:0008679,GO:0051287;gbkey=CDS;gene=glxR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA,NAD binding|0051287||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415042.1;locus_tag=PHA55_RS06895;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_000765839.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1421045	1422499	.	+	.	ID=gene-PHA55_RS06900;Name=ybbW;gbkey=Gene;gene=ybbW;gene_biotype=protein_coding;locus_tag=PHA55_RS06900;old_locus_tag=PHA55_06900
NZ_CP116044.1	Protein Homology	CDS	1421045	1422499	.	+	0	ID=cds-WP_000401120.1;Parent=gene-PHA55_RS06900;Dbxref=Genbank:WP_000401120.1;Name=WP_000401120.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ybbW;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415044.4;locus_tag=PHA55_RS06900;product=putative allantoin permease;protein_id=WP_000401120.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1422559	1423920	.	+	.	ID=gene-PHA55_RS06905;Name=allB;gbkey=Gene;gene=allB;gene_biotype=protein_coding;locus_tag=PHA55_RS06905;old_locus_tag=PHA55_06905
NZ_CP116044.1	Protein Homology	CDS	1422559	1423920	.	+	0	ID=cds-WP_000006887.1;Parent=gene-PHA55_RS06905;Dbxref=Genbank:WP_000006887.1;Name=WP_000006887.1;Ontology_term=GO:0000256,GO:0004038;gbkey=CDS;gene=allB;go_function=allantoinase activity|0004038||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415045.1;locus_tag=PHA55_RS06905;product=allantoinase AllB;protein_id=WP_000006887.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1423977	1425278	.	+	.	ID=gene-PHA55_RS06910;Name=ybbY;gbkey=Gene;gene=ybbY;gene_biotype=protein_coding;locus_tag=PHA55_RS06910;old_locus_tag=PHA55_06910
NZ_CP116044.1	Protein Homology	CDS	1423977	1425278	.	+	0	ID=cds-WP_001297442.1;Parent=gene-PHA55_RS06910;Dbxref=Genbank:WP_001297442.1;Name=WP_001297442.1;gbkey=CDS;gene=ybbY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308602.2;locus_tag=PHA55_RS06910;product=uracil/xanthine transporter;protein_id=WP_001297442.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1425300	1426445	.	+	.	ID=gene-PHA55_RS06915;Name=glxK;gbkey=Gene;gene=glxK;gene_biotype=protein_coding;locus_tag=PHA55_RS06915;old_locus_tag=PHA55_06915
NZ_CP116044.1	Protein Homology	CDS	1425300	1426445	.	+	0	ID=cds-WP_000706355.1;Parent=gene-PHA55_RS06915;Dbxref=Genbank:WP_000706355.1;Name=WP_000706355.1;gbkey=CDS;gene=glxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415047.1;locus_tag=PHA55_RS06915;product=glycerate 3-kinase;protein_id=WP_000706355.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1426574	1427359	.	-	.	ID=gene-PHA55_RS06920;Name=allE;gbkey=Gene;gene=allE;gene_biotype=protein_coding;locus_tag=PHA55_RS06920;old_locus_tag=PHA55_06920
NZ_CP116044.1	Protein Homology	CDS	1426574	1427359	.	-	0	ID=cds-WP_000540946.1;Parent=gene-PHA55_RS06920;Dbxref=Genbank:WP_000540946.1;Name=WP_000540946.1;Ontology_term=GO:0010136,GO:0071522;gbkey=CDS;gene=allE;go_function=ureidoglycine aminohydrolase activity|0071522||IEA;go_process=ureide catabolic process|0010136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308604.1;locus_tag=PHA55_RS06920;product=(S)-ureidoglycine aminohydrolase;protein_id=WP_000540946.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1427370	1428605	.	-	.	ID=gene-PHA55_RS06925;Name=allC;gbkey=Gene;gene=allC;gene_biotype=protein_coding;locus_tag=PHA55_RS06925;old_locus_tag=PHA55_06925
NZ_CP116044.1	Protein Homology	CDS	1427370	1428605	.	-	0	ID=cds-WP_001306951.1;Parent=gene-PHA55_RS06925;Dbxref=Genbank:WP_001306951.1;Name=WP_001306951.1;Ontology_term=GO:0000256,GO:0009442,GO:0047652;gbkey=CDS;gene=allC;go_function=allantoate deiminase activity|0047652||IEA;go_process=allantoin catabolic process|0000256||IEA,allantoin assimilation pathway|0009442||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415049.1;locus_tag=PHA55_RS06925;product=allantoate deiminase;protein_id=WP_001306951.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1428627	1429676	.	-	.	ID=gene-PHA55_RS06930;Name=allD;gbkey=Gene;gene=allD;gene_biotype=protein_coding;locus_tag=PHA55_RS06930;old_locus_tag=PHA55_06930
NZ_CP116044.1	Protein Homology	CDS	1428627	1429676	.	-	0	ID=cds-WP_000703879.1;Parent=gene-PHA55_RS06930;Dbxref=Genbank:WP_000703879.1;Name=WP_000703879.1;Ontology_term=GO:0016491;gbkey=CDS;gene=allD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308606.1;locus_tag=PHA55_RS06930;product=ureidoglycolate dehydrogenase;protein_id=WP_000703879.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1429993	1431660	.	+	.	ID=gene-PHA55_RS06935;Name=fdrA;gbkey=Gene;gene=fdrA;gene_biotype=protein_coding;locus_tag=PHA55_RS06935;old_locus_tag=PHA55_06935
NZ_CP116044.1	Protein Homology	CDS	1429993	1431660	.	+	0	ID=cds-WP_000580828.1;Parent=gene-PHA55_RS06935;Dbxref=Genbank:WP_000580828.1;Name=WP_000580828.1;gbkey=CDS;gene=fdrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415051.1;locus_tag=PHA55_RS06935;product=acyl-CoA synthetase FdrA;protein_id=WP_000580828.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1431670	1432929	.	+	.	ID=gene-PHA55_RS06940;Name=ylbE;gbkey=Gene;gene=ylbE;gene_biotype=protein_coding;locus_tag=PHA55_RS06940;old_locus_tag=PHA55_06940
NZ_CP116044.1	Protein Homology	CDS	1431670	1432929	.	+	0	ID=cds-WP_227898487.1;Parent=gene-PHA55_RS06940;Dbxref=Genbank:WP_227898487.1;Name=WP_227898487.1;gbkey=CDS;gene=ylbE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009029994.1;locus_tag=PHA55_RS06940;product=DUF1116 domain-containing protein;protein_id=WP_227898487.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1432940	1433755	.	+	.	ID=gene-PHA55_RS06945;Name=ylbF;gbkey=Gene;gene=ylbF;gene_biotype=protein_coding;locus_tag=PHA55_RS06945;old_locus_tag=PHA55_06945
NZ_CP116044.1	Protein Homology	CDS	1432940	1433755	.	+	0	ID=cds-WP_001306952.1;Parent=gene-PHA55_RS06945;Dbxref=Genbank:WP_001306952.1;Name=WP_001306952.1;gbkey=CDS;gene=ylbF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308609.1;locus_tag=PHA55_RS06945;product=DUF2877 domain-containing protein;protein_id=WP_001306952.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1433752	1434645	.	+	.	ID=gene-PHA55_RS06950;Name=ybcF;gbkey=Gene;gene=ybcF;gene_biotype=protein_coding;locus_tag=PHA55_RS06950;old_locus_tag=PHA55_06950
NZ_CP116044.1	Protein Homology	CDS	1433752	1434645	.	+	0	ID=cds-WP_000855388.1;Parent=gene-PHA55_RS06950;Dbxref=Genbank:WP_000855388.1;Name=WP_000855388.1;Ontology_term=GO:0006525,GO:0008804;gbkey=CDS;gene=ybcF;go_function=carbamate kinase activity|0008804||IEA;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706399.1;locus_tag=PHA55_RS06950;product=carbamate kinase;protein_id=WP_000855388.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1434840	1435907	.	-	.	ID=gene-PHA55_RS06955;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=PHA55_RS06955;old_locus_tag=PHA55_06955
NZ_CP116044.1	Protein Homology	CDS	1434840	1435907	.	-	0	ID=cds-WP_000815522.1;Parent=gene-PHA55_RS06955;Dbxref=Genbank:WP_000815522.1;Name=WP_000815522.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415055.1;locus_tag=PHA55_RS06955;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_000815522.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1435904	1436413	.	-	.	ID=gene-PHA55_RS06960;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=PHA55_RS06960;old_locus_tag=PHA55_06960
NZ_CP116044.1	Protein Homology	CDS	1435904	1436413	.	-	0	ID=cds-WP_001295318.1;Parent=gene-PHA55_RS06960;Dbxref=Genbank:WP_001295318.1;Name=WP_001295318.1;Ontology_term=GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308612.1;locus_tag=PHA55_RS06960;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_001295318.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1436531	1437253	.	-	.	ID=gene-PHA55_RS06965;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=PHA55_RS06965;old_locus_tag=PHA55_06965
NZ_CP116044.1	Protein Homology	CDS	1436531	1437253	.	-	0	ID=cds-WP_000212252.1;Parent=gene-PHA55_RS06965;Dbxref=Genbank:WP_000212252.1;Name=WP_000212252.1;Ontology_term=GO:0009245,GO:0008758;gbkey=CDS;gene=lpxH;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706402.1;locus_tag=PHA55_RS06965;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_000212252.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1437256	1437750	.	-	.	ID=gene-PHA55_RS06970;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=PHA55_RS06970;old_locus_tag=PHA55_06970
NZ_CP116044.1	Protein Homology	CDS	1437256	1437750	.	-	0	ID=cds-WP_000256002.1;Parent=gene-PHA55_RS06970;Dbxref=Genbank:WP_000256002.1;Name=WP_000256002.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=PHA55_RS06970;product=peptidylprolyl isomerase B;protein_id=WP_000256002.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1437924	1439309	.	+	.	ID=gene-PHA55_RS06975;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=PHA55_RS06975;old_locus_tag=PHA55_06975
NZ_CP116044.1	Protein Homology	CDS	1437924	1439309	.	+	0	ID=cds-WP_000912345.1;Parent=gene-PHA55_RS06975;Dbxref=Genbank:WP_000912345.1;Name=WP_000912345.1;Ontology_term=GO:0006423,GO:0004817,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=PHA55_RS06975;product=cysteine--tRNA ligase;protein_id=WP_000912345.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1439345	1439866	.	-	.	ID=gene-PHA55_RS06980;Name=ybcI;gbkey=Gene;gene=ybcI;gene_biotype=protein_coding;locus_tag=PHA55_RS06980;old_locus_tag=PHA55_06980
NZ_CP116044.1	Protein Homology	CDS	1439345	1439866	.	-	0	ID=cds-WP_001143552.1;Parent=gene-PHA55_RS06980;Dbxref=Genbank:WP_001143552.1;Name=WP_001143552.1;gbkey=CDS;gene=ybcI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415060.1;locus_tag=PHA55_RS06980;product=metal-dependent hydrolase;protein_id=WP_001143552.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1439974	1440186	.	-	.	ID=gene-PHA55_RS06985;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=PHA55_RS06985;old_locus_tag=PHA55_06985
NZ_CP116044.1	Protein Homology	CDS	1439974	1440186	.	-	0	ID=cds-WP_000190288.1;Parent=gene-PHA55_RS06985;Dbxref=Genbank:WP_000190288.1;Name=WP_000190288.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308617.2;locus_tag=PHA55_RS06985;product=ribosome-associated protein YbcJ;protein_id=WP_000190288.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1440188	1441054	.	-	.	ID=gene-PHA55_RS06990;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=PHA55_RS06990;old_locus_tag=PHA55_06990
NZ_CP116044.1	Protein Homology	CDS	1440188	1441054	.	-	0	ID=cds-WP_000729160.1;Parent=gene-PHA55_RS06990;Dbxref=Genbank:WP_000729160.1;Name=WP_000729160.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415062.1;locus_tag=PHA55_RS06990;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_000729160.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1441535	1442077	.	+	.	ID=gene-PHA55_RS06995;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=PHA55_RS06995;old_locus_tag=PHA55_06995
NZ_CP116044.1	Protein Homology	CDS	1441535	1442077	.	+	0	ID=cds-WP_000776555.1;Parent=gene-PHA55_RS06995;Dbxref=Genbank:WP_000776555.1;Name=WP_000776555.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=fimA;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308619.2;locus_tag=PHA55_RS06995;product=type 1 fimbrial major subunit FimA;protein_id=WP_000776555.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1442297	1442989	.	+	.	ID=gene-PHA55_RS07000;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=PHA55_RS07000;old_locus_tag=PHA55_07000
NZ_CP116044.1	Protein Homology	CDS	1442297	1442989	.	+	0	ID=cds-WP_000988375.1;Parent=gene-PHA55_RS07000;Dbxref=Genbank:WP_000988375.1;Name=WP_000988375.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415064.1;locus_tag=PHA55_RS07000;product=type 1 fimbria chaperone FimC;protein_id=WP_000988375.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1443020	1445629	.	+	.	ID=gene-PHA55_RS07005;Name=sfmD;gbkey=Gene;gene=sfmD;gene_biotype=protein_coding;locus_tag=PHA55_RS07005;old_locus_tag=PHA55_07005
NZ_CP116044.1	Protein Homology	CDS	1443020	1445629	.	+	0	ID=cds-WP_001306954.1;Parent=gene-PHA55_RS07005;Dbxref=Genbank:WP_001306954.1;Name=WP_001306954.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;gene=sfmD;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308621.1;locus_tag=PHA55_RS07005;product=fimbrial biogenesis usher protein;protein_id=WP_001306954.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1445642	1446649	.	+	.	ID=gene-PHA55_RS07010;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=PHA55_RS07010;old_locus_tag=PHA55_07010
NZ_CP116044.1	Protein Homology	CDS	1445642	1446649	.	+	0	ID=cds-WP_000691080.1;Parent=gene-PHA55_RS07010;Dbxref=Genbank:WP_000691080.1;Name=WP_000691080.1;Ontology_term=GO:0007155;gbkey=CDS;gene=fimH;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308622.2;locus_tag=PHA55_RS07010;product=type 1 fimbria D-mannose specific adhesin FimH;protein_id=WP_000691080.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1446660	1447175	.	+	.	ID=gene-PHA55_RS07015;Name=sfmF;gbkey=Gene;gene=sfmF;gene_biotype=protein_coding;locus_tag=PHA55_RS07015;old_locus_tag=PHA55_07015
NZ_CP116044.1	Protein Homology	CDS	1446660	1447175	.	+	0	ID=cds-WP_001250422.1;Parent=gene-PHA55_RS07015;Dbxref=Genbank:WP_001250422.1;Name=WP_001250422.1;gbkey=CDS;gene=sfmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415067.1;locus_tag=PHA55_RS07015;product=fimbria assembly protein;protein_id=WP_001250422.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1447178	1447810	.	-	.	ID=gene-PHA55_RS07020;Name=fimZ;gbkey=Gene;gene=fimZ;gene_biotype=protein_coding;locus_tag=PHA55_RS07020;old_locus_tag=PHA55_07020
NZ_CP116044.1	Protein Homology	CDS	1447178	1447810	.	-	0	ID=cds-WP_000805428.1;Parent=gene-PHA55_RS07020;Dbxref=Genbank:WP_000805428.1;Name=WP_000805428.1;gbkey=CDS;gene=fimZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308624.1;locus_tag=PHA55_RS07020;product=fimbria biosynthesis transcriptional regulator FimZ;protein_id=WP_000805428.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1448053	1448129	.	+	.	ID=gene-PHA55_RS07025;Name=PHA55_RS07025;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS07025;old_locus_tag=PHA55_07025
NZ_CP116044.1	tRNAscan-SE	tRNA	1448053	1448129	.	+	.	ID=rna-PHA55_RS07025;Parent=gene-PHA55_RS07025;anticodon=(pos:1448087..1448089);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS07025;product=tRNA-Arg
NZ_CP116044.1	tRNAscan-SE	exon	1448053	1448129	.	+	.	ID=exon-PHA55_RS07025-1;Parent=rna-PHA55_RS07025;anticodon=(pos:1448087..1448089);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS07025;product=tRNA-Arg
NZ_CP116044.1	RefSeq	gene	1448175	1448936	.	-	.	ID=gene-PHA55_RS07030;Name=envY;gbkey=Gene;gene=envY;gene_biotype=protein_coding;locus_tag=PHA55_RS07030;old_locus_tag=PHA55_07030
NZ_CP116044.1	Protein Homology	CDS	1448175	1448936	.	-	0	ID=cds-WP_001177469.1;Parent=gene-PHA55_RS07030;Dbxref=Genbank:WP_001177469.1;Name=WP_001177469.1;gbkey=CDS;gene=envY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308625.1;locus_tag=PHA55_RS07030;product=DNA-binding transcriptional regulator EnvY;protein_id=WP_001177469.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1449119	1450009	.	-	.	ID=gene-PHA55_RS07035;Name=ybcH;gbkey=Gene;gene=ybcH;gene_biotype=protein_coding;locus_tag=PHA55_RS07035;old_locus_tag=PHA55_07035
NZ_CP116044.1	Protein Homology	CDS	1449119	1450009	.	-	0	ID=cds-WP_001224567.1;Parent=gene-PHA55_RS07035;Dbxref=Genbank:WP_001224567.1;Name=WP_001224567.1;gbkey=CDS;gene=ybcH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308626.1;locus_tag=PHA55_RS07035;product=DUF4434 family protein;protein_id=WP_001224567.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1450010	1452982	.	-	.	ID=gene-PHA55_RS07040;Name=nfrA;gbkey=Gene;gene=nfrA;gene_biotype=protein_coding;locus_tag=PHA55_RS07040;old_locus_tag=PHA55_07040
NZ_CP116044.1	Protein Homology	CDS	1450010	1452982	.	-	0	ID=cds-WP_000662373.1;Parent=gene-PHA55_RS07040;Dbxref=Genbank:WP_000662373.1;Name=WP_000662373.1;gbkey=CDS;gene=nfrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415100.1;locus_tag=PHA55_RS07040;product=bacteriophage adsorption protein NfrA;protein_id=WP_000662373.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1452969	1455206	.	-	.	ID=gene-PHA55_RS07045;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=PHA55_RS07045;old_locus_tag=PHA55_07045
NZ_CP116044.1	Protein Homology	CDS	1452969	1455206	.	-	0	ID=cds-WP_000383951.1;Parent=gene-PHA55_RS07045;Dbxref=Genbank:WP_000383951.1;Name=WP_000383951.1;gbkey=CDS;gene=nrfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308628.1;locus_tag=PHA55_RS07045;product=cyclic di-3'%2C5'-guanylate-activated glycosyltransferase NrfB;protein_id=WP_000383951.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1455475	1456611	.	-	.	ID=gene-PHA55_RS07050;Name=PHA55_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS07050;old_locus_tag=PHA55_07050
NZ_CP116044.1	Protein Homology	CDS	1455475	1456611	.	-	0	ID=cds-WP_000420935.1;Parent=gene-PHA55_RS07050;Dbxref=Genbank:WP_000420935.1;Name=WP_000420935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=PHA55_RS07050;product=ISAs1-like element ISEc1 family transposase;protein_id=WP_000420935.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1457576	1457863	.	-	.	ID=gene-PHA55_RS07055;Name=PHA55_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS07055;old_locus_tag=PHA55_07055
NZ_CP116044.1	Protein Homology	CDS	1457576	1457863	.	-	0	ID=cds-WP_001021476.1;Parent=gene-PHA55_RS07055;Dbxref=Genbank:WP_001021476.1;Name=WP_001021476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001021472.1;locus_tag=PHA55_RS07055;product=hypothetical protein;protein_id=WP_001021476.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1457863	1458123	.	-	.	ID=gene-PHA55_RS07060;Name=PHA55_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS07060;old_locus_tag=PHA55_07060
NZ_CP116044.1	Protein Homology	CDS	1457863	1458123	.	-	0	ID=cds-WP_000889443.1;Parent=gene-PHA55_RS07060;Dbxref=Genbank:WP_000889443.1;Name=WP_000889443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000889444.1;locus_tag=PHA55_RS07060;product=hypothetical protein;protein_id=WP_000889443.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1458156	1462673	.	-	.	ID=gene-PHA55_RS07065;Name=PHA55_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS07065;old_locus_tag=PHA55_07065
NZ_CP116044.1	Protein Homology	CDS	1458156	1462673	.	-	0	ID=cds-WP_137499513.1;Parent=gene-PHA55_RS07065;Dbxref=Genbank:WP_137499513.1;Name=WP_137499513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001470092.1;locus_tag=PHA55_RS07065;product=PAAR domain-containing protein;protein_id=WP_137499513.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1462693	1463154	.	-	.	ID=gene-PHA55_RS07070;Name=PHA55_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS07070;old_locus_tag=PHA55_07070
NZ_CP116044.1	Protein Homology	CDS	1462693	1463154	.	-	0	ID=cds-WP_001160804.1;Parent=gene-PHA55_RS07070;Dbxref=Genbank:WP_001160804.1;Name=WP_001160804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308633.1;locus_tag=PHA55_RS07070;product=DcrB-related protein;protein_id=WP_001160804.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1463182	1465083	.	-	.	ID=gene-PHA55_RS07075;Name=PHA55_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS07075;old_locus_tag=PHA55_07075
NZ_CP116044.1	Protein Homology	CDS	1463182	1465083	.	-	0	ID=cds-WP_000103215.1;Parent=gene-PHA55_RS07075;Dbxref=Genbank:WP_000103215.1;Name=WP_000103215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308634.1;locus_tag=PHA55_RS07075;product=type VI secretion system tip protein VgrG;protein_id=WP_000103215.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1465820	1467268	.	-	.	ID=gene-PHA55_RS07080;Name=cusS;gbkey=Gene;gene=cusS;gene_biotype=protein_coding;locus_tag=PHA55_RS07080;old_locus_tag=PHA55_07080
NZ_CP116044.1	Protein Homology	CDS	1465820	1467268	.	-	0	ID=cds-WP_000253823.1;Parent=gene-PHA55_RS07080;Dbxref=Genbank:WP_000253823.1;Name=WP_000253823.1;gbkey=CDS;gene=cusS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739168.1;locus_tag=PHA55_RS07080;product=Cu(+)/Ag(+) sensor histidine kinase CusS;protein_id=WP_000253823.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1467258	1467941	.	-	.	ID=gene-PHA55_RS07085;Name=cusR;gbkey=Gene;gene=cusR;gene_biotype=protein_coding;locus_tag=PHA55_RS07085;old_locus_tag=PHA55_07085
NZ_CP116044.1	Protein Homology	CDS	1467258	1467941	.	-	0	ID=cds-WP_000770941.1;Parent=gene-PHA55_RS07085;Dbxref=Genbank:WP_000770941.1;Name=WP_000770941.1;gbkey=CDS;gene=cusR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308636.1;locus_tag=PHA55_RS07085;product=copper response regulator transcription factor CusR;protein_id=WP_000770941.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1468098	1469480	.	+	.	ID=gene-PHA55_RS07090;Name=cusC;gbkey=Gene;gene=cusC;gene_biotype=protein_coding;locus_tag=PHA55_RS07090;old_locus_tag=PHA55_07090
NZ_CP116044.1	Protein Homology	CDS	1468098	1469480	.	+	0	ID=cds-WP_000074237.1;Parent=gene-PHA55_RS07090;Dbxref=Genbank:WP_000074237.1;Name=WP_000074237.1;gbkey=CDS;gene=cusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308637.1;locus_tag=PHA55_RS07090;product=Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC;protein_id=WP_000074237.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1469504	1469836	.	+	.	ID=gene-PHA55_RS07095;Name=cusF;gbkey=Gene;gene=cusF;gene_biotype=protein_coding;locus_tag=PHA55_RS07095;old_locus_tag=PHA55_07095
NZ_CP116044.1	Protein Homology	CDS	1469504	1469836	.	+	0	ID=cds-WP_000709865.1;Parent=gene-PHA55_RS07095;Dbxref=Genbank:WP_000709865.1;Name=WP_000709865.1;gbkey=CDS;gene=cusF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415105.1;locus_tag=PHA55_RS07095;product=Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone CusF;protein_id=WP_000709865.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1469852	1471075	.	+	.	ID=gene-PHA55_RS07100;Name=cusB;gbkey=Gene;gene=cusB;gene_biotype=protein_coding;locus_tag=PHA55_RS07100;old_locus_tag=PHA55_07100
NZ_CP116044.1	Protein Homology	CDS	1469852	1471075	.	+	0	ID=cds-WP_000717160.1;Parent=gene-PHA55_RS07100;Dbxref=Genbank:WP_000717160.1;Name=WP_000717160.1;gbkey=CDS;gene=cusB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415106.1;locus_tag=PHA55_RS07100;product=Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit CusB;protein_id=WP_000717160.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1471087	1474230	.	+	.	ID=gene-PHA55_RS07105;Name=cusA;gbkey=Gene;gene=cusA;gene_biotype=protein_coding;locus_tag=PHA55_RS07105;old_locus_tag=PHA55_07105
NZ_CP116044.1	Protein Homology	CDS	1471087	1474230	.	+	0	ID=cds-WP_000573940.1;Parent=gene-PHA55_RS07105;Dbxref=Genbank:WP_000573940.1;Name=WP_000573940.1;gbkey=CDS;gene=cusA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415107.1;locus_tag=PHA55_RS07105;product=Cu(+)/Ag(+) efflux RND transporter permease subunit CusA;protein_id=WP_000573940.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1474332	1475708	.	+	.	ID=gene-PHA55_RS07110;Name=pheP;gbkey=Gene;gene=pheP;gene_biotype=protein_coding;locus_tag=PHA55_RS07110;old_locus_tag=PHA55_07110
NZ_CP116044.1	Protein Homology	CDS	1474332	1475708	.	+	0	ID=cds-WP_000786320.1;Parent=gene-PHA55_RS07110;Dbxref=Genbank:WP_000786320.1;Name=WP_000786320.1;Ontology_term=GO:0006865;gbkey=CDS;gene=pheP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415108.1;locus_tag=PHA55_RS07110;product=phenylalanine transporter;protein_id=WP_000786320.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1475776	1477023	.	-	.	ID=gene-PHA55_RS07115;Name=ybdG;gbkey=Gene;gene=ybdG;gene_biotype=protein_coding;locus_tag=PHA55_RS07115;old_locus_tag=PHA55_07115
NZ_CP116044.1	Protein Homology	CDS	1475776	1477023	.	-	0	ID=cds-WP_001153146.1;Parent=gene-PHA55_RS07115;Dbxref=Genbank:WP_001153146.1;Name=WP_001153146.1;gbkey=CDS;gene=ybdG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415109.1;locus_tag=PHA55_RS07115;product=mechanosensitive ion channel YbdG;protein_id=WP_001153146.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1477131	1477784	.	-	.	ID=gene-PHA55_RS07120;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;locus_tag=PHA55_RS07120;old_locus_tag=PHA55_07120
NZ_CP116044.1	Protein Homology	CDS	1477131	1477784	.	-	0	ID=cds-WP_000351464.1;Parent=gene-PHA55_RS07120;Dbxref=Genbank:WP_000351464.1;Name=WP_000351464.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308643.1;locus_tag=PHA55_RS07120;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=WP_000351464.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1477878	1478246	.	-	.	ID=gene-PHA55_RS07125;Name=ybdF;gbkey=Gene;gene=ybdF;gene_biotype=protein_coding;locus_tag=PHA55_RS07125;old_locus_tag=PHA55_07125
NZ_CP116044.1	Protein Homology	CDS	1477878	1478246	.	-	0	ID=cds-WP_000360951.1;Parent=gene-PHA55_RS07125;Dbxref=Genbank:WP_000360951.1;Name=WP_000360951.1;gbkey=CDS;gene=ybdF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308644.1;locus_tag=PHA55_RS07125;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000360951.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1478311	1478559	.	-	.	ID=gene-PHA55_RS07130;Name=ybdJ;gbkey=Gene;gene=ybdJ;gene_biotype=protein_coding;locus_tag=PHA55_RS07130;old_locus_tag=PHA55_07130
NZ_CP116044.1	Protein Homology	CDS	1478311	1478559	.	-	0	ID=cds-WP_000682518.1;Parent=gene-PHA55_RS07130;Dbxref=Genbank:WP_000682518.1;Name=WP_000682518.1;gbkey=CDS;gene=ybdJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308645.1;locus_tag=PHA55_RS07130;product=DUF1158 domain-containing protein;protein_id=WP_000682518.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1478625	1479743	.	-	.	ID=gene-PHA55_RS07135;Name=ybdK;gbkey=Gene;gene=ybdK;gene_biotype=protein_coding;locus_tag=PHA55_RS07135;old_locus_tag=PHA55_07135
NZ_CP116044.1	Protein Homology	CDS	1478625	1479743	.	-	0	ID=cds-WP_001130618.1;Parent=gene-PHA55_RS07135;Dbxref=Genbank:WP_001130618.1;Name=WP_001130618.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;gene=ybdK;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=cellular modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415113.1;locus_tag=PHA55_RS07135;product=YbdK family carboxylate-amine ligase;protein_id=WP_001130618.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1480185	1480337	.	+	.	ID=gene-PHA55_RS07140;Name=hokE;gbkey=Gene;gene=hokE;gene_biotype=protein_coding;locus_tag=PHA55_RS07140;old_locus_tag=PHA55_07140
NZ_CP116044.1	Protein Homology	CDS	1480185	1480337	.	+	0	ID=cds-WP_000956456.1;Parent=gene-PHA55_RS07140;Dbxref=Genbank:WP_000956456.1;Name=WP_000956456.1;gbkey=CDS;gene=hokE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025295.1;locus_tag=PHA55_RS07140;product=type I toxin-antitoxin system toxin HokE;protein_id=WP_000956456.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1480688	1480840	.	+	.	ID=gene-PHA55_RS07145;Name=hokE;gbkey=Gene;gene=hokE;gene_biotype=protein_coding;locus_tag=PHA55_RS07145;old_locus_tag=PHA55_07145
NZ_CP116044.1	Protein Homology	CDS	1480688	1480840	.	+	0	ID=cds-WP_000956465.1;Parent=gene-PHA55_RS07145;Dbxref=Genbank:WP_000956465.1;Name=WP_000956465.1;gbkey=CDS;gene=hokE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308648.2;locus_tag=PHA55_RS07145;product=type I toxin-antitoxin system toxin HokE;protein_id=WP_000956465.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1480962	1481582	.	-	.	ID=gene-PHA55_RS07150;Name=entD;gbkey=Gene;gene=entD;gene_biotype=protein_coding;locus_tag=PHA55_RS07150;old_locus_tag=PHA55_07150
NZ_CP116044.1	Protein Homology	CDS	1480962	1481582	.	-	0	ID=cds-WP_001298903.1;Parent=gene-PHA55_RS07150;Dbxref=Genbank:WP_001298903.1;Name=WP_001298903.1;Ontology_term=GO:0009239,GO:0000287,GO:0008897,GO:0009366;gbkey=CDS;gene=entD;go_component=enterobactin synthetase complex|0009366||IEA;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=enterobactin biosynthetic process|0009239||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415115.2;locus_tag=PHA55_RS07150;product=enterobactin synthase subunit EntD;protein_id=WP_001298903.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	1481619	1481717	.	-	.	ID=gene-PHA55_RS07155;Name=PHA55_RS07155;end_range=1481717,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS07155;old_locus_tag=PHA55_07155;partial=true;pseudo=true;start_range=.,1481619
NZ_CP116044.1	Protein Homology	CDS	1481619	1481717	.	-	0	ID=cds-PHA55_RS07155;Parent=gene-PHA55_RS07155;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1481717,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518748.2;locus_tag=PHA55_RS07155;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1481619;transl_table=11
NZ_CP116044.1	RefSeq	gene	1481757	1483997	.	-	.	ID=gene-PHA55_RS07160;Name=fepA;gbkey=Gene;gene=fepA;gene_biotype=protein_coding;locus_tag=PHA55_RS07160;old_locus_tag=PHA55_07160
NZ_CP116044.1	Protein Homology	CDS	1481757	1483997	.	-	0	ID=cds-WP_042099639.1;Parent=gene-PHA55_RS07160;Dbxref=Genbank:WP_042099639.1;Name=WP_042099639.1;gbkey=CDS;gene=fepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415116.1;locus_tag=PHA55_RS07160;product=siderophore enterobactin receptor FepA;protein_id=WP_042099639.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1484240	1485442	.	+	.	ID=gene-PHA55_RS07165;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=PHA55_RS07165;old_locus_tag=PHA55_07165
NZ_CP116044.1	Protein Homology	CDS	1484240	1485442	.	+	0	ID=cds-WP_000125825.1;Parent=gene-PHA55_RS07165;Dbxref=Genbank:WP_000125825.1;Name=WP_000125825.1;Ontology_term=GO:0005506,GO:0008849;gbkey=CDS;gene=fes;go_function=iron ion binding|0005506||IEA,enterochelin esterase activity|0008849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308651.2;locus_tag=PHA55_RS07165;product=enterochelin esterase;protein_id=WP_000125825.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1485445	1485663	.	+	.	ID=gene-PHA55_RS07170;Name=ybdZ;gbkey=Gene;gene=ybdZ;gene_biotype=protein_coding;locus_tag=PHA55_RS07170;old_locus_tag=PHA55_07170
NZ_CP116044.1	Protein Homology	CDS	1485445	1485663	.	+	0	ID=cds-WP_000885781.1;Parent=gene-PHA55_RS07170;Dbxref=Genbank:WP_000885781.1;Name=WP_000885781.1;gbkey=CDS;gene=ybdZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502592.1;locus_tag=PHA55_RS07170;product=enterobactin biosynthesis protein YbdZ;protein_id=WP_000885781.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1485660	1489541	.	+	.	ID=gene-PHA55_RS07175;Name=entF;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=PHA55_RS07175;old_locus_tag=PHA55_07175
NZ_CP116044.1	Protein Homology	CDS	1485660	1489541	.	+	0	ID=cds-WP_000077729.1;Parent=gene-PHA55_RS07175;Dbxref=Genbank:WP_000077729.1;Name=WP_000077729.1;Ontology_term=GO:0009058,GO:0003824,GO:0031177;gbkey=CDS;gene=entF;go_function=catalytic activity|0003824||IEA,phosphopantetheine binding|0031177||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415118.1;locus_tag=PHA55_RS07175;product=enterobactin non-ribosomal peptide synthetase EntF;protein_id=WP_000077729.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1489757	1490890	.	+	.	ID=gene-PHA55_RS07180;Name=wzz(fepE);gbkey=Gene;gene=wzz(fepE);gene_biotype=protein_coding;locus_tag=PHA55_RS07180;old_locus_tag=PHA55_07180
NZ_CP116044.1	Protein Homology	CDS	1489757	1490890	.	+	0	ID=cds-WP_000096744.1;Parent=gene-PHA55_RS07180;Dbxref=Genbank:WP_000096744.1;Name=WP_000096744.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzz(fepE);go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308653.1;locus_tag=PHA55_RS07180;product=LPS O-antigen length regulator Wzz(fepE);protein_id=WP_000096744.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1490887	1491702	.	-	.	ID=gene-PHA55_RS07185;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=PHA55_RS07185;old_locus_tag=PHA55_07185
NZ_CP116044.1	Protein Homology	CDS	1490887	1491702	.	-	0	ID=cds-WP_000140647.1;Parent=gene-PHA55_RS07185;Dbxref=Genbank:WP_000140647.1;Name=WP_000140647.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fepC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415120.1;locus_tag=PHA55_RS07185;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=WP_000140647.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1491699	1492691	.	-	.	ID=gene-PHA55_RS07190;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=PHA55_RS07190;old_locus_tag=PHA55_07190
NZ_CP116044.1	Protein Homology	CDS	1491699	1492691	.	-	0	ID=cds-WP_000640978.1;Parent=gene-PHA55_RS07190;Dbxref=Genbank:WP_000640978.1;Name=WP_000640978.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fepG;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415121.1;locus_tag=PHA55_RS07190;product=iron-enterobactin ABC transporter permease;protein_id=WP_000640978.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1492688	1493692	.	-	.	ID=gene-PHA55_RS07195;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=PHA55_RS07195;old_locus_tag=PHA55_07195
NZ_CP116044.1	Protein Homology	CDS	1492688	1493692	.	-	0	ID=cds-WP_001295314.1;Parent=gene-PHA55_RS07195;Dbxref=Genbank:WP_001295314.1;Name=WP_001295314.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=fepD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308656.1;locus_tag=PHA55_RS07195;product=Fe(3+)-siderophore ABC transporter permease;protein_id=WP_001295314.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1493803	1495053	.	+	.	ID=gene-PHA55_RS07200;Name=entS;gbkey=Gene;gene=entS;gene_biotype=protein_coding;locus_tag=PHA55_RS07200;old_locus_tag=PHA55_07200
NZ_CP116044.1	Protein Homology	CDS	1493803	1495053	.	+	0	ID=cds-WP_001041789.1;Parent=gene-PHA55_RS07200;Dbxref=Genbank:WP_001041789.1;Name=WP_001041789.1;Ontology_term=GO:0042930,GO:0042931;gbkey=CDS;gene=entS;go_function=enterobactin transmembrane transporter activity|0042931||IEA;go_process=enterobactin transport|0042930||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415123.1;locus_tag=PHA55_RS07200;product=enterobactin transporter EntS;protein_id=WP_001041789.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1495057	1496013	.	-	.	ID=gene-PHA55_RS07205;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=PHA55_RS07205;old_locus_tag=PHA55_07205
NZ_CP116044.1	Protein Homology	CDS	1495057	1496013	.	-	0	ID=cds-WP_001234312.1;Parent=gene-PHA55_RS07205;Dbxref=Genbank:WP_001234312.1;Name=WP_001234312.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415124.1;locus_tag=PHA55_RS07205;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=WP_001234312.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1496202	1497377	.	+	.	ID=gene-PHA55_RS07210;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=PHA55_RS07210;old_locus_tag=PHA55_07210
NZ_CP116044.1	Protein Homology	CDS	1496202	1497377	.	+	0	ID=cds-WP_001351525.1;Parent=gene-PHA55_RS07210;Dbxref=Genbank:WP_001351525.1;Name=WP_001351525.1;Ontology_term=GO:0008909;gbkey=CDS;gene=entC;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308659.1;locus_tag=PHA55_RS07210;product=isochorismate synthase EntC;protein_id=WP_001351525.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1497387	1498997	.	+	.	ID=gene-PHA55_RS07215;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=PHA55_RS07215;old_locus_tag=PHA55_07215
NZ_CP116044.1	Protein Homology	CDS	1497387	1498997	.	+	0	ID=cds-WP_000026809.1;Parent=gene-PHA55_RS07215;Dbxref=Genbank:WP_000026809.1;Name=WP_000026809.1;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415126.1;locus_tag=PHA55_RS07215;product=(2%2C3-dihydroxybenzoyl)adenylate synthase EntE;protein_id=WP_000026809.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1499011	1499868	.	+	.	ID=gene-PHA55_RS07220;Name=entB;gbkey=Gene;gene=entB;gene_biotype=protein_coding;locus_tag=PHA55_RS07220;old_locus_tag=PHA55_07220
NZ_CP116044.1	Protein Homology	CDS	1499011	1499868	.	+	0	ID=cds-WP_001007122.1;Parent=gene-PHA55_RS07220;Dbxref=Genbank:WP_001007122.1;Name=WP_001007122.1;gbkey=CDS;gene=entB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308661.1;locus_tag=PHA55_RS07220;product=enterobactin biosynthesis bifunctional isochorismatase/aryl carrier protein EntB;protein_id=WP_001007122.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1499868	1500614	.	+	.	ID=gene-PHA55_RS07225;Name=entA;gbkey=Gene;gene=entA;gene_biotype=protein_coding;locus_tag=PHA55_RS07225;old_locus_tag=PHA55_07225
NZ_CP116044.1	Protein Homology	CDS	1499868	1500614	.	+	0	ID=cds-WP_000347652.1;Parent=gene-PHA55_RS07225;Dbxref=Genbank:WP_000347652.1;Name=WP_000347652.1;gbkey=CDS;gene=entA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415128.1;locus_tag=PHA55_RS07225;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase EntA;protein_id=WP_000347652.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1500617	1501030	.	+	.	ID=gene-PHA55_RS07230;Name=entH;gbkey=Gene;gene=entH;gene_biotype=protein_coding;locus_tag=PHA55_RS07230;old_locus_tag=PHA55_07230
NZ_CP116044.1	Protein Homology	CDS	1500617	1501030	.	+	0	ID=cds-WP_000637953.1;Parent=gene-PHA55_RS07230;Dbxref=Genbank:WP_000637953.1;Name=WP_000637953.1;gbkey=CDS;gene=entH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415129.1;locus_tag=PHA55_RS07230;product=proofreading thioesterase EntH;protein_id=WP_000637953.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1501211	1503316	.	+	.	ID=gene-PHA55_RS07235;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=PHA55_RS07235;old_locus_tag=PHA55_07235
NZ_CP116044.1	Protein Homology	CDS	1501211	1503316	.	+	0	ID=cds-WP_001043157.1;Parent=gene-PHA55_RS07235;Dbxref=Genbank:WP_001043157.1;Name=WP_001043157.1;Ontology_term=GO:0009267;gbkey=CDS;gene=cstA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415130.1;locus_tag=PHA55_RS07235;product=pyruvate/proton symporter CstA;protein_id=WP_001043157.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1503498	1503695	.	+	.	ID=gene-PHA55_RS07240;Name=ybdD;gbkey=Gene;gene=ybdD;gene_biotype=protein_coding;locus_tag=PHA55_RS07240;old_locus_tag=PHA55_07240
NZ_CP116044.1	Protein Homology	CDS	1503498	1503695	.	+	0	ID=cds-WP_000460431.1;Parent=gene-PHA55_RS07240;Dbxref=Genbank:WP_000460431.1;Name=WP_000460431.1;gbkey=CDS;gene=ybdD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904950.1;locus_tag=PHA55_RS07240;product=YbdD/YjiX family protein;protein_id=WP_000460431.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1503705	1504793	.	-	.	ID=gene-PHA55_RS07245;Name=hcxA;gbkey=Gene;gene=hcxA;gene_biotype=protein_coding;locus_tag=PHA55_RS07245;old_locus_tag=PHA55_07245
NZ_CP116044.1	Protein Homology	CDS	1503705	1504793	.	-	0	ID=cds-WP_001120461.1;Parent=gene-PHA55_RS07245;Dbxref=Genbank:WP_001120461.1;Name=WP_001120461.1;gbkey=CDS;gene=hcxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308665.1;locus_tag=PHA55_RS07245;product=hydroxycarboxylate dehydrogenase HcxA;protein_id=WP_001120461.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1504902	1506062	.	+	.	ID=gene-PHA55_RS07250;Name=ybdL;gbkey=Gene;gene=ybdL;gene_biotype=protein_coding;locus_tag=PHA55_RS07250;old_locus_tag=PHA55_07250
NZ_CP116044.1	Protein Homology	CDS	1504902	1506062	.	+	0	ID=cds-WP_000183939.1;Parent=gene-PHA55_RS07250;Dbxref=Genbank:WP_000183939.1;Name=WP_000183939.1;gbkey=CDS;gene=ybdL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706456.1;locus_tag=PHA55_RS07250;product=methionine-oxo-acid transaminase;protein_id=WP_000183939.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1506063	1506692	.	-	.	ID=gene-PHA55_RS07255;Name=ybdM;gbkey=Gene;gene=ybdM;gene_biotype=protein_coding;locus_tag=PHA55_RS07255;old_locus_tag=PHA55_07255
NZ_CP116044.1	Protein Homology	CDS	1506063	1506692	.	-	0	ID=cds-WP_000502952.1;Parent=gene-PHA55_RS07255;Dbxref=Genbank:WP_000502952.1;Name=WP_000502952.1;gbkey=CDS;gene=ybdM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308667.1;locus_tag=PHA55_RS07255;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_000502952.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1506665	1507885	.	-	.	ID=gene-PHA55_RS07260;Name=ybdN;gbkey=Gene;gene=ybdN;gene_biotype=protein_coding;locus_tag=PHA55_RS07260;old_locus_tag=PHA55_07260
NZ_CP116044.1	Protein Homology	CDS	1506665	1507885	.	-	0	ID=cds-WP_000029813.1;Parent=gene-PHA55_RS07260;Dbxref=Genbank:WP_000029813.1;Name=WP_000029813.1;gbkey=CDS;gene=ybdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308668.1;locus_tag=PHA55_RS07260;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000029813.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1508032	1508934	.	-	.	ID=gene-PHA55_RS07265;Name=ybdO;gbkey=Gene;gene=ybdO;gene_biotype=protein_coding;locus_tag=PHA55_RS07265;old_locus_tag=PHA55_07265
NZ_CP116044.1	Protein Homology	CDS	1508032	1508934	.	-	0	ID=cds-WP_000002448.1;Parent=gene-PHA55_RS07265;Dbxref=Genbank:WP_000002448.1;Name=WP_000002448.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ybdO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415136.1;locus_tag=PHA55_RS07265;product=LysR family transcriptional regulator;protein_id=WP_000002448.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1509143	1509889	.	-	.	ID=gene-PHA55_RS07270;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=PHA55_RS07270;old_locus_tag=PHA55_07270
NZ_CP116044.1	Protein Homology	CDS	1509143	1509889	.	-	0	ID=cds-WP_000913829.1;Parent=gene-PHA55_RS07270;Dbxref=Genbank:WP_000913829.1;Name=WP_000913829.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415137.2;locus_tag=PHA55_RS07270;product=thiol:disulfide interchange protein DsbG;protein_id=WP_000913829.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1510261	1510824	.	+	.	ID=gene-PHA55_RS07275;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=PHA55_RS07275;old_locus_tag=PHA55_07275
NZ_CP116044.1	Protein Homology	CDS	1510261	1510824	.	+	0	ID=cds-WP_000052796.1;Parent=gene-PHA55_RS07275;Dbxref=Genbank:WP_000052796.1;Name=WP_000052796.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=PHA55_RS07275;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_000052796.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1510953	1512518	.	+	.	ID=gene-PHA55_RS07280;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=PHA55_RS07280;old_locus_tag=PHA55_07280
NZ_CP116044.1	Protein Homology	CDS	1510953	1512518	.	+	0	ID=cds-WP_000887629.1;Parent=gene-PHA55_RS07280;Dbxref=Genbank:WP_000887629.1;Name=WP_000887629.1;Ontology_term=GO:0006805,GO:0009398,GO:0016668;gbkey=CDS;gene=ahpF;go_function=oxidoreductase activity%2C acting on a sulfur group of donors%2C NAD(P) as acceptor|0016668||IEA;go_process=xenobiotic metabolic process|0006805||IEA,FMN biosynthetic process|0009398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455864.1;locus_tag=PHA55_RS07280;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_000887629.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1512639	1513067	.	-	.	ID=gene-PHA55_RS07285;Name=uspG;gbkey=Gene;gene=uspG;gene_biotype=protein_coding;locus_tag=PHA55_RS07285;old_locus_tag=PHA55_07285
NZ_CP116044.1	Protein Homology	CDS	1512639	1513067	.	-	0	ID=cds-WP_000278505.1;Parent=gene-PHA55_RS07285;Dbxref=Genbank:WP_000278505.1;Name=WP_000278505.1;gbkey=CDS;gene=uspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308673.1;locus_tag=PHA55_RS07285;product=universal stress protein UspG;protein_id=WP_000278505.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1513288	1514526	.	+	.	ID=gene-PHA55_RS07290;Name=ybdR;gbkey=Gene;gene=ybdR;gene_biotype=protein_coding;locus_tag=PHA55_RS07290;old_locus_tag=PHA55_07290
NZ_CP116044.1	Protein Homology	CDS	1513288	1514526	.	+	0	ID=cds-WP_000646150.1;Parent=gene-PHA55_RS07290;Dbxref=Genbank:WP_000646150.1;Name=WP_000646150.1;gbkey=CDS;gene=ybdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308674.1;locus_tag=PHA55_RS07290;product=glutathione-dependent formaldehyde dehydrogenase;protein_id=WP_000646150.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1514530	1514619	.	-	.	ID=gene-PHA55_RS07295;Name=yldA;gbkey=Gene;gene=yldA;gene_biotype=protein_coding;locus_tag=PHA55_RS07295
NZ_CP116044.1	GeneMarkS-2+	CDS	1514530	1514619	.	-	0	ID=cds-WP_000796528.1;Parent=gene-PHA55_RS07295;Dbxref=Genbank:WP_000796528.1;Name=WP_000796528.1;gbkey=CDS;gene=yldA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA55_RS07295;product=hypothetical protein;protein_id=WP_000796528.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1514757	1515167	.	-	.	ID=gene-PHA55_RS07300;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=PHA55_RS07300;old_locus_tag=PHA55_07295
NZ_CP116044.1	Protein Homology	CDS	1514757	1515167	.	-	0	ID=cds-WP_000089731.1;Parent=gene-PHA55_RS07300;Dbxref=Genbank:WP_000089731.1;Name=WP_000089731.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308676.1;locus_tag=PHA55_RS07300;product=nucleoside diphosphate kinase regulator;protein_id=WP_000089731.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1515397	1516203	.	-	.	ID=gene-PHA55_RS07305;Name=rna;gbkey=Gene;gene=rna;gene_biotype=protein_coding;locus_tag=PHA55_RS07305;old_locus_tag=PHA55_07300
NZ_CP116044.1	Protein Homology	CDS	1515397	1516203	.	-	0	ID=cds-WP_001331449.1;Parent=gene-PHA55_RS07305;Dbxref=Genbank:WP_001331449.1;Name=WP_001331449.1;gbkey=CDS;gene=rna;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308677.1;locus_tag=PHA55_RS07305;product=ribonuclease I;protein_id=WP_001331449.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1516317	1517780	.	-	.	ID=gene-PHA55_RS07310;Name=citT;gbkey=Gene;gene=citT;gene_biotype=protein_coding;locus_tag=PHA55_RS07310;old_locus_tag=PHA55_07305
NZ_CP116044.1	Protein Homology	CDS	1516317	1517780	.	-	0	ID=cds-WP_000050323.1;Parent=gene-PHA55_RS07310;Dbxref=Genbank:WP_000050323.1;Name=WP_000050323.1;gbkey=CDS;gene=citT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308678.1;locus_tag=PHA55_RS07310;product=citrate/succinate antiporter CitT;protein_id=WP_000050323.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1517831	1518709	.	-	.	ID=gene-PHA55_RS07315;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=PHA55_RS07315;old_locus_tag=PHA55_07310
NZ_CP116044.1	Protein Homology	CDS	1517831	1518709	.	-	0	ID=cds-WP_000062457.1;Parent=gene-PHA55_RS07315;Dbxref=Genbank:WP_000062457.1;Name=WP_000062457.1;gbkey=CDS;gene=citG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415146.1;locus_tag=PHA55_RS07315;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_000062457.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1518684	1519235	.	-	.	ID=gene-PHA55_RS07320;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=PHA55_RS07320;old_locus_tag=PHA55_07315
NZ_CP116044.1	Protein Homology	CDS	1518684	1519235	.	-	0	ID=cds-WP_000550424.1;Parent=gene-PHA55_RS07320;Dbxref=Genbank:WP_000550424.1;Name=WP_000550424.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308680.1;locus_tag=PHA55_RS07320;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_000550424.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1519239	1520771	.	-	.	ID=gene-PHA55_RS07325;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=PHA55_RS07325;old_locus_tag=PHA55_07320
NZ_CP116044.1	Protein Homology	CDS	1519239	1520771	.	-	0	ID=cds-WP_000192245.1;Parent=gene-PHA55_RS07325;Dbxref=Genbank:WP_000192245.1;Name=WP_000192245.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415148.1;locus_tag=PHA55_RS07325;product=citrate lyase subunit alpha;protein_id=WP_000192245.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1520782	1521690	.	-	.	ID=gene-PHA55_RS07330;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=PHA55_RS07330;old_locus_tag=PHA55_07325
NZ_CP116044.1	Protein Homology	CDS	1520782	1521690	.	-	0	ID=cds-WP_000622357.1;Parent=gene-PHA55_RS07330;Dbxref=Genbank:WP_000622357.1;Name=WP_000622357.1;Ontology_term=GO:0006113,GO:0008815,GO:0009346;gbkey=CDS;gene=citE;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415149.4;locus_tag=PHA55_RS07330;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_000622357.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1521687	1521983	.	-	.	ID=gene-PHA55_RS07335;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=PHA55_RS07335;old_locus_tag=PHA55_07330
NZ_CP116044.1	Protein Homology	CDS	1521687	1521983	.	-	0	ID=cds-WP_000700703.1;Parent=gene-PHA55_RS07335;Dbxref=Genbank:WP_000700703.1;Name=WP_000700703.1;Ontology_term=GO:0006113,GO:0008815,GO:0009346;gbkey=CDS;gene=citD;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308683.1;locus_tag=PHA55_RS07335;product=citrate lyase acyl carrier protein;protein_id=WP_000700703.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1521998	1523056	.	-	.	ID=gene-PHA55_RS07340;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=PHA55_RS07340;old_locus_tag=PHA55_07335
NZ_CP116044.1	Protein Homology	CDS	1521998	1523056	.	-	0	ID=cds-WP_000467710.1;Parent=gene-PHA55_RS07340;Dbxref=Genbank:WP_000467710.1;Name=WP_000467710.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415151.4;locus_tag=PHA55_RS07340;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_000467710.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1523436	1525094	.	+	.	ID=gene-PHA55_RS07345;Name=dpiB;gbkey=Gene;gene=dpiB;gene_biotype=protein_coding;locus_tag=PHA55_RS07345;old_locus_tag=PHA55_07340
NZ_CP116044.1	Protein Homology	CDS	1523436	1525094	.	+	0	ID=cds-WP_000939766.1;Parent=gene-PHA55_RS07345;Dbxref=Genbank:WP_000939766.1;Name=WP_000939766.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=dpiB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308685.1;locus_tag=PHA55_RS07345;product=sensor histidine kinase DpiB;protein_id=WP_000939766.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1525063	1525743	.	+	.	ID=gene-PHA55_RS07350;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=PHA55_RS07350;old_locus_tag=PHA55_07345
NZ_CP116044.1	Protein Homology	CDS	1525063	1525743	.	+	0	ID=cds-WP_000126500.1;Parent=gene-PHA55_RS07350;Dbxref=Genbank:WP_000126500.1;Name=WP_000126500.1;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308686.1;locus_tag=PHA55_RS07350;product=two-component response regulator DpiA;protein_id=WP_000126500.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1525784	1527169	.	-	.	ID=gene-PHA55_RS07355;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=PHA55_RS07355;old_locus_tag=PHA55_07350
NZ_CP116044.1	Protein Homology	CDS	1525784	1527169	.	-	0	ID=cds-WP_000955063.1;Parent=gene-PHA55_RS07355;Dbxref=Genbank:WP_000955063.1;Name=WP_000955063.1;Ontology_term=GO:0015740,GO:0015556;gbkey=CDS;gene=dcuC;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308687.1;locus_tag=PHA55_RS07355;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_000955063.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1527758	1528318	.	+	.	ID=gene-PHA55_RS07360;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=PHA55_RS07360;old_locus_tag=PHA55_07355
NZ_CP116044.1	Protein Homology	CDS	1527758	1528318	.	+	0	ID=cds-WP_001103094.1;Parent=gene-PHA55_RS07360;Dbxref=Genbank:WP_001103094.1;Name=WP_001103094.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415155.1;locus_tag=PHA55_RS07360;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WP_001103094.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1528493	1528702	.	+	.	ID=gene-PHA55_RS07365;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=PHA55_RS07365;old_locus_tag=PHA55_07360
NZ_CP116044.1	Protein Homology	CDS	1528493	1528702	.	+	0	ID=cds-WP_000034825.1;Parent=gene-PHA55_RS07365;Dbxref=Genbank:WP_000034825.1;Name=WP_000034825.1;gbkey=CDS;gene=cspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308689.1;locus_tag=PHA55_RS07365;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000034825.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1528756	1529139	.	-	.	ID=gene-PHA55_RS07370;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=PHA55_RS07370;old_locus_tag=PHA55_07365
NZ_CP116044.1	Protein Homology	CDS	1528756	1529139	.	-	0	ID=cds-WP_000939738.1;Parent=gene-PHA55_RS07370;Dbxref=Genbank:WP_000939738.1;Name=WP_000939738.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308690.1;locus_tag=PHA55_RS07370;product=fluoride efflux transporter CrcB;protein_id=WP_000939738.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1529232	1530020	.	+	.	ID=gene-PHA55_RS07375;Name=PHA55_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS07375;old_locus_tag=PHA55_07370
NZ_CP116044.1	Protein Homology	CDS	1529232	1530020	.	+	0	ID=cds-WP_000959109.1;Parent=gene-PHA55_RS07375;Dbxref=Genbank:WP_000959109.1;Name=WP_000959109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308691.1;locus_tag=PHA55_RS07375;product=deaminated glutathione amidase;protein_id=WP_000959109.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1530149	1530352	.	+	.	ID=gene-PHA55_RS07380;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=PHA55_RS07380;old_locus_tag=PHA55_07375
NZ_CP116044.1	Protein Homology	CDS	1530149	1530352	.	+	0	ID=cds-WP_000503931.1;Parent=gene-PHA55_RS07380;Dbxref=Genbank:WP_000503931.1;Name=WP_000503931.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308692.1;locus_tag=PHA55_RS07380;product=twin-arginine translocase subunit TatE;protein_id=WP_000503931.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1530453	1531418	.	-	.	ID=gene-PHA55_RS07385;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=PHA55_RS07385;old_locus_tag=PHA55_07380
NZ_CP116044.1	Protein Homology	CDS	1530453	1531418	.	-	0	ID=cds-WP_000042632.1;Parent=gene-PHA55_RS07385;Dbxref=Genbank:WP_000042632.1;Name=WP_000042632.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=PHA55_RS07385;product=lipoyl synthase;protein_id=WP_000042632.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1531627	1532580	.	-	.	ID=gene-PHA55_RS07390;Name=ybeF;gbkey=Gene;gene=ybeF;gene_biotype=protein_coding;locus_tag=PHA55_RS07390;old_locus_tag=PHA55_07385
NZ_CP116044.1	Protein Homology	CDS	1531627	1532580	.	-	0	ID=cds-WP_000378043.1;Parent=gene-PHA55_RS07390;Dbxref=Genbank:WP_000378043.1;Name=WP_000378043.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ybeF;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415162.4;locus_tag=PHA55_RS07390;product=YbeF family transcriptional regulator;protein_id=WP_000378043.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1532839	1533480	.	-	.	ID=gene-PHA55_RS07395;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=PHA55_RS07395;old_locus_tag=PHA55_07390
NZ_CP116044.1	Protein Homology	CDS	1532839	1533480	.	-	0	ID=cds-WP_000284027.1;Parent=gene-PHA55_RS07395;Dbxref=Genbank:WP_000284027.1;Name=WP_000284027.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415163.2;locus_tag=PHA55_RS07395;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_000284027.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1533581	1533844	.	-	.	ID=gene-PHA55_RS07400;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=PHA55_RS07400;old_locus_tag=PHA55_07395
NZ_CP116044.1	Protein Homology	CDS	1533581	1533844	.	-	0	ID=cds-WP_000850550.1;Parent=gene-PHA55_RS07400;Dbxref=Genbank:WP_000850550.1;Name=WP_000850550.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308696.1;locus_tag=PHA55_RS07400;product=DUF493 family protein YbeD;protein_id=WP_000850550.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1533955	1535166	.	-	.	ID=gene-PHA55_RS07405;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=PHA55_RS07405;old_locus_tag=PHA55_07400
NZ_CP116044.1	Protein Homology	CDS	1533955	1535166	.	-	0	ID=cds-WP_001092082.1;Parent=gene-PHA55_RS07405;Dbxref=Genbank:WP_001092082.1;Name=WP_001092082.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415165.1;locus_tag=PHA55_RS07405;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=WP_001092082.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1535306	1536394	.	-	.	ID=gene-PHA55_RS07410;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=PHA55_RS07410;old_locus_tag=PHA55_07405
NZ_CP116044.1	Protein Homology	CDS	1535306	1536394	.	-	0	ID=cds-WP_001231415.1;Parent=gene-PHA55_RS07410;Dbxref=Genbank:WP_001231415.1;Name=WP_001231415.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415166.1;locus_tag=PHA55_RS07410;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WP_001231415.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1536405	1537517	.	-	.	ID=gene-PHA55_RS07415;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=PHA55_RS07415;old_locus_tag=PHA55_07410
NZ_CP116044.1	Protein Homology	CDS	1536405	1537517	.	-	0	ID=cds-WP_000131719.1;Parent=gene-PHA55_RS07415;Dbxref=Genbank:WP_000131719.1;Name=WP_000131719.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885876.1;locus_tag=PHA55_RS07415;product=peptidoglycan glycosyltransferase MrdB;protein_id=WP_000131719.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1537520	1539421	.	-	.	ID=gene-PHA55_RS07420;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=PHA55_RS07420;old_locus_tag=PHA55_07415
NZ_CP116044.1	Protein Homology	CDS	1537520	1539421	.	-	0	ID=cds-WP_000776191.1;Parent=gene-PHA55_RS07420;Dbxref=Genbank:WP_000776191.1;Name=WP_000776191.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308700.1;locus_tag=PHA55_RS07420;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WP_000776191.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1539452	1539919	.	-	.	ID=gene-PHA55_RS07425;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=PHA55_RS07425;old_locus_tag=PHA55_07420
NZ_CP116044.1	Protein Homology	CDS	1539452	1539919	.	-	0	ID=cds-WP_000776105.1;Parent=gene-PHA55_RS07425;Dbxref=Genbank:WP_000776105.1;Name=WP_000776105.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=PHA55_RS07425;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_000776105.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1539923	1540240	.	-	.	ID=gene-PHA55_RS07430;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=PHA55_RS07430;old_locus_tag=PHA55_07425
NZ_CP116044.1	Protein Homology	CDS	1539923	1540240	.	-	0	ID=cds-WP_001161664.1;Parent=gene-PHA55_RS07430;Dbxref=Genbank:WP_001161664.1;Name=WP_001161664.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=PHA55_RS07430;product=ribosome silencing factor;protein_id=WP_001161664.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1540500	1541111	.	-	.	ID=gene-PHA55_RS07435;Name=cobC;gbkey=Gene;gene=cobC;gene_biotype=protein_coding;locus_tag=PHA55_RS07435;old_locus_tag=PHA55_07430
NZ_CP116044.1	Protein Homology	CDS	1540500	1541111	.	-	0	ID=cds-WP_001241898.1;Parent=gene-PHA55_RS07435;Dbxref=Genbank:WP_001241898.1;Name=WP_001241898.1;Ontology_term=GO:0009236,GO:0043755;gbkey=CDS;gene=cobC;go_function=alpha-ribazole phosphatase activity|0043755||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415171.1;locus_tag=PHA55_RS07435;product=adenosylcobalamin/alpha-ribazole phosphatase;protein_id=WP_001241898.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1541135	1541776	.	-	.	ID=gene-PHA55_RS07440;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=PHA55_RS07440;old_locus_tag=PHA55_07435
NZ_CP116044.1	Protein Homology	CDS	1541135	1541776	.	-	0	ID=cds-WP_000838889.1;Parent=gene-PHA55_RS07440;Dbxref=Genbank:WP_000838889.1;Name=WP_000838889.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415172.1;locus_tag=PHA55_RS07440;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_000838889.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1541778	1542809	.	-	.	ID=gene-PHA55_RS07445;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=PHA55_RS07445;old_locus_tag=PHA55_07440
NZ_CP116044.1	Protein Homology	CDS	1541778	1542809	.	-	0	ID=cds-WP_000620516.1;Parent=gene-PHA55_RS07445;Dbxref=Genbank:WP_000620516.1;Name=WP_000620516.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=holA;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308705.1;locus_tag=PHA55_RS07445;product=DNA polymerase III subunit delta;protein_id=WP_000620516.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1542809	1543390	.	-	.	ID=gene-PHA55_RS07450;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=PHA55_RS07450;old_locus_tag=PHA55_07445
NZ_CP116044.1	Protein Homology	CDS	1542809	1543390	.	-	0	ID=cds-WP_001269673.1;Parent=gene-PHA55_RS07450;Dbxref=Genbank:WP_001269673.1;Name=WP_001269673.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415174.1;locus_tag=PHA55_RS07450;product=LPS assembly lipoprotein LptE;protein_id=WP_001269673.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1543405	1545987	.	-	.	ID=gene-PHA55_RS07455;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=PHA55_RS07455;old_locus_tag=PHA55_07450
NZ_CP116044.1	Protein Homology	CDS	1543405	1545987	.	-	0	ID=cds-WP_001157890.1;Parent=gene-PHA55_RS07455;Dbxref=Genbank:WP_001157890.1;Name=WP_001157890.1;Ontology_term=GO:0006429,GO:0004823,GO:0005737;gbkey=CDS;gene=leuS;go_component=cytoplasm|0005737||IEA;go_function=leucine-tRNA ligase activity|0004823||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=PHA55_RS07455;product=leucine--tRNA ligase;protein_id=WP_001157890.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1546222	1546704	.	+	.	ID=gene-PHA55_RS07460;Name=ybeL;gbkey=Gene;gene=ybeL;gene_biotype=protein_coding;locus_tag=PHA55_RS07460;old_locus_tag=PHA55_07455
NZ_CP116044.1	Protein Homology	CDS	1546222	1546704	.	+	0	ID=cds-WP_001044880.1;Parent=gene-PHA55_RS07460;Dbxref=Genbank:WP_001044880.1;Name=WP_001044880.1;gbkey=CDS;gene=ybeL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308708.1;locus_tag=PHA55_RS07460;product=zinc ribbon-containing protein;protein_id=WP_001044880.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1546774	1547751	.	-	.	ID=gene-PHA55_RS07465;Name=ybeQ;gbkey=Gene;gene=ybeQ;gene_biotype=protein_coding;locus_tag=PHA55_RS07465;old_locus_tag=PHA55_07460
NZ_CP116044.1	Protein Homology	CDS	1546774	1547751	.	-	0	ID=cds-WP_000578195.1;Parent=gene-PHA55_RS07465;Dbxref=Genbank:WP_000578195.1;Name=WP_000578195.1;gbkey=CDS;gene=ybeQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415177.4;locus_tag=PHA55_RS07465;product=Sel1 family TPR-like repeat protein YbeQ;protein_id=WP_000578195.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1547915	1548622	.	+	.	ID=gene-PHA55_RS07470;Name=ybeR;gbkey=Gene;gene=ybeR;gene_biotype=protein_coding;locus_tag=PHA55_RS07470;old_locus_tag=PHA55_07465
NZ_CP116044.1	Protein Homology	CDS	1547915	1548622	.	+	0	ID=cds-WP_000367017.1;Parent=gene-PHA55_RS07470;Dbxref=Genbank:WP_000367017.1;Name=WP_000367017.1;gbkey=CDS;gene=ybeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415178.1;locus_tag=PHA55_RS07470;product=DUF1266 domain-containing protein;protein_id=WP_000367017.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1548619	1550046	.	+	.	ID=gene-PHA55_RS07475;Name=djlB;gbkey=Gene;gene=djlB;gene_biotype=protein_coding;locus_tag=PHA55_RS07475;old_locus_tag=PHA55_07470
NZ_CP116044.1	Protein Homology	CDS	1548619	1550046	.	+	0	ID=cds-WP_000786613.1;Parent=gene-PHA55_RS07475;Dbxref=Genbank:WP_000786613.1;Name=WP_000786613.1;gbkey=CDS;gene=djlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706564.1;locus_tag=PHA55_RS07475;product=J domain-containing protein;protein_id=WP_000786613.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1550056	1550610	.	-	.	ID=gene-PHA55_RS07480;Name=ybeT;gbkey=Gene;gene=ybeT;gene_biotype=protein_coding;locus_tag=PHA55_RS07480;old_locus_tag=PHA55_07475
NZ_CP116044.1	Protein Homology	CDS	1550056	1550610	.	-	0	ID=cds-WP_001035678.1;Parent=gene-PHA55_RS07480;Dbxref=Genbank:WP_001035678.1;Name=WP_001035678.1;gbkey=CDS;gene=ybeT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706563.1;locus_tag=PHA55_RS07480;product=tetratricopeptide repeat protein;protein_id=WP_001035678.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1550711	1551418	.	+	.	ID=gene-PHA55_RS07485;Name=ybeU;gbkey=Gene;gene=ybeU;gene_biotype=protein_coding;locus_tag=PHA55_RS07485;old_locus_tag=PHA55_07480
NZ_CP116044.1	Protein Homology	CDS	1550711	1551418	.	+	0	ID=cds-WP_001030930.1;Parent=gene-PHA55_RS07485;Dbxref=Genbank:WP_001030930.1;Name=WP_001030930.1;gbkey=CDS;gene=ybeU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415181.1;locus_tag=PHA55_RS07485;product=DUF1266 domain-containing protein;protein_id=WP_001030930.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1551415	1552866	.	+	.	ID=gene-PHA55_RS07490;Name=djlC;gbkey=Gene;gene=djlC;gene_biotype=protein_coding;locus_tag=PHA55_RS07490;old_locus_tag=PHA55_07485
NZ_CP116044.1	Protein Homology	CDS	1551415	1552866	.	+	0	ID=cds-WP_001326405.1;Parent=gene-PHA55_RS07490;Dbxref=Genbank:WP_001326405.1;Name=WP_001326405.1;gbkey=CDS;gene=djlC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706561.1;locus_tag=PHA55_RS07490;product=co-chaperone DjlC;protein_id=WP_001326405.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1552926	1554596	.	-	.	ID=gene-PHA55_RS07495;Name=hscC;gbkey=Gene;gene=hscC;gene_biotype=protein_coding;locus_tag=PHA55_RS07495;old_locus_tag=PHA55_07490
NZ_CP116044.1	Protein Homology	CDS	1552926	1554596	.	-	0	ID=cds-WP_000367854.1;Parent=gene-PHA55_RS07495;Dbxref=Genbank:WP_000367854.1;Name=WP_000367854.1;gbkey=CDS;gene=hscC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000367910.1;locus_tag=PHA55_RS07495;product=molecular chaperone HscC;protein_id=WP_000367854.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1554680	1555615	.	-	.	ID=gene-PHA55_RS07500;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=PHA55_RS07500;old_locus_tag=PHA55_07495
NZ_CP116044.1	Protein Homology	CDS	1554680	1555615	.	-	0	ID=cds-WP_001207503.1;Parent=gene-PHA55_RS07500;Dbxref=Genbank:WP_001207503.1;Name=WP_001207503.1;Ontology_term=GO:0006206,GO:0050263;gbkey=CDS;gene=rihA;go_function=ribosylpyrimidine nucleosidase activity|0050263||IEA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308717.1;locus_tag=PHA55_RS07500;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=WP_001207503.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1555733	1556458	.	-	.	ID=gene-PHA55_RS07505;Name=gltL;gbkey=Gene;gene=gltL;gene_biotype=protein_coding;locus_tag=PHA55_RS07505;old_locus_tag=PHA55_07500
NZ_CP116044.1	Protein Homology	CDS	1555733	1556458	.	-	0	ID=cds-WP_000631384.1;Parent=gene-PHA55_RS07505;Dbxref=Genbank:WP_000631384.1;Name=WP_000631384.1;gbkey=CDS;gene=gltL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=PHA55_RS07505;product=glutamate/aspartate ABC transporter ATP-binding protein GltL;protein_id=WP_000631384.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1556458	1557132	.	-	.	ID=gene-PHA55_RS07510;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=PHA55_RS07510;old_locus_tag=PHA55_07505
NZ_CP116044.1	Protein Homology	CDS	1556458	1557132	.	-	0	ID=cds-WP_000272824.1;Parent=gene-PHA55_RS07510;Dbxref=Genbank:WP_000272824.1;Name=WP_000272824.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308719.1;locus_tag=PHA55_RS07510;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_000272824.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1557132	1557872	.	-	.	ID=gene-PHA55_RS07515;Name=gltJ;gbkey=Gene;gene=gltJ;gene_biotype=protein_coding;locus_tag=PHA55_RS07515;old_locus_tag=PHA55_07510
NZ_CP116044.1	Protein Homology	CDS	1557132	1557872	.	-	0	ID=cds-WP_033561083.1;Parent=gene-PHA55_RS07515;Dbxref=Genbank:WP_033561083.1;Name=WP_033561083.1;gbkey=CDS;gene=gltJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415187.1;locus_tag=PHA55_RS07515;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=WP_033561083.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1558042	1558950	.	-	.	ID=gene-PHA55_RS07520;Name=gltI;gbkey=Gene;gene=gltI;gene_biotype=protein_coding;locus_tag=PHA55_RS07520;old_locus_tag=PHA55_07515
NZ_CP116044.1	Protein Homology	CDS	1558042	1558950	.	-	0	ID=cds-WP_001177084.1;Parent=gene-PHA55_RS07520;Dbxref=Genbank:WP_001177084.1;Name=WP_001177084.1;gbkey=CDS;gene=gltI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308721.1;locus_tag=PHA55_RS07520;product=glutamate/aspartate ABC transporter substrate-binding protein GltI;protein_id=WP_001177084.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1559405	1561282	.	+	.	ID=gene-PHA55_RS07525;Name=PHA55_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS07525;old_locus_tag=PHA55_07520
NZ_CP116044.1	Protein Homology	CDS	1559405	1561282	.	+	0	ID=cds-WP_001276781.1;Parent=gene-PHA55_RS07525;Dbxref=Genbank:WP_001276781.1;Name=WP_001276781.1;Ontology_term=GO:0004252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001276742.1;locus_tag=PHA55_RS07525;product=rhomboid family intramembrane serine protease;protein_id=WP_001276781.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1561360	1562898	.	-	.	ID=gene-PHA55_RS07530;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=PHA55_RS07530;old_locus_tag=PHA55_07525
NZ_CP116044.1	Protein Homology	CDS	1561360	1562898	.	-	0	ID=cds-WP_033561084.1;Parent=gene-PHA55_RS07530;Dbxref=Genbank:WP_033561084.1;Name=WP_033561084.1;Ontology_term=GO:0006497,GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=protein lipidation|0006497||IEA,lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415190.1;locus_tag=PHA55_RS07530;product=apolipoprotein N-acyltransferase;protein_id=WP_033561084.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1562923	1563801	.	-	.	ID=gene-PHA55_RS07535;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=PHA55_RS07535;old_locus_tag=PHA55_07530
NZ_CP116044.1	Protein Homology	CDS	1562923	1563801	.	-	0	ID=cds-WP_001278605.1;Parent=gene-PHA55_RS07535;Dbxref=Genbank:WP_001278605.1;Name=WP_001278605.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308723.1;locus_tag=PHA55_RS07535;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_001278605.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1563891	1564358	.	-	.	ID=gene-PHA55_RS07540;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=PHA55_RS07540;old_locus_tag=PHA55_07535
NZ_CP116044.1	Protein Homology	CDS	1563891	1564358	.	-	0	ID=cds-WP_000084469.1;Parent=gene-PHA55_RS07540;Dbxref=Genbank:WP_000084469.1;Name=WP_000084469.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=ribonuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014169133.1;locus_tag=PHA55_RS07540;product=rRNA maturation RNase YbeY;protein_id=WP_000084469.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1564355	1565395	.	-	.	ID=gene-PHA55_RS07545;Name=ybeZ;gbkey=Gene;gene=ybeZ;gene_biotype=protein_coding;locus_tag=PHA55_RS07545;old_locus_tag=PHA55_07540
NZ_CP116044.1	Protein Homology	CDS	1564355	1565395	.	-	0	ID=cds-WP_001018040.1;Parent=gene-PHA55_RS07545;Dbxref=Genbank:WP_001018040.1;Name=WP_001018040.1;gbkey=CDS;gene=ybeZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415193.2;locus_tag=PHA55_RS07545;product=PhoH family protein;protein_id=WP_001018040.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1565548	1566972	.	-	.	ID=gene-PHA55_RS07550;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=PHA55_RS07550;old_locus_tag=PHA55_07545
NZ_CP116044.1	Protein Homology	CDS	1565548	1566972	.	-	0	ID=cds-WP_000162739.1;Parent=gene-PHA55_RS07550;Dbxref=Genbank:WP_000162739.1;Name=WP_000162739.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706551.1;locus_tag=PHA55_RS07550;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_000162739.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1567118	1568293	.	+	.	ID=gene-PHA55_RS07555;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=PHA55_RS07555;old_locus_tag=PHA55_07550
NZ_CP116044.1	Protein Homology	CDS	1567118	1568293	.	+	0	ID=cds-WP_021556589.1;Parent=gene-PHA55_RS07555;Dbxref=Genbank:WP_021556589.1;Name=WP_021556589.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706550.2;locus_tag=PHA55_RS07555;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_021556589.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1568447	1568521	.	-	.	ID=gene-PHA55_RS07560;Name=PHA55_RS07560;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS07560;old_locus_tag=PHA55_07555
NZ_CP116044.1	tRNAscan-SE	tRNA	1568447	1568521	.	-	.	ID=rna-PHA55_RS07560;Parent=gene-PHA55_RS07560;anticodon=(pos:complement(1568487..1568489));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS07560;product=tRNA-Gln
NZ_CP116044.1	tRNAscan-SE	exon	1568447	1568521	.	-	.	ID=exon-PHA55_RS07560-1;Parent=rna-PHA55_RS07560;anticodon=(pos:complement(1568487..1568489));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS07560;product=tRNA-Gln
NZ_CP116044.1	RefSeq	gene	1568559	1568633	.	-	.	ID=gene-PHA55_RS07565;Name=PHA55_RS07565;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS07565;old_locus_tag=PHA55_07560
NZ_CP116044.1	tRNAscan-SE	tRNA	1568559	1568633	.	-	.	ID=rna-PHA55_RS07565;Parent=gene-PHA55_RS07565;anticodon=(pos:complement(1568599..1568601));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS07565;product=tRNA-Gln
NZ_CP116044.1	tRNAscan-SE	exon	1568559	1568633	.	-	.	ID=exon-PHA55_RS07565-1;Parent=rna-PHA55_RS07565;anticodon=(pos:complement(1568599..1568601));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS07565;product=tRNA-Gln
NZ_CP116044.1	RefSeq	gene	1568682	1568758	.	-	.	ID=gene-PHA55_RS07570;Name=PHA55_RS07570;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS07570;old_locus_tag=PHA55_07565
NZ_CP116044.1	tRNAscan-SE	tRNA	1568682	1568758	.	-	.	ID=rna-PHA55_RS07570;Parent=gene-PHA55_RS07570;anticodon=(pos:complement(1568722..1568724));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS07570;product=tRNA-Met
NZ_CP116044.1	tRNAscan-SE	exon	1568682	1568758	.	-	.	ID=exon-PHA55_RS07570-1;Parent=rna-PHA55_RS07570;anticodon=(pos:complement(1568722..1568724));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS07570;product=tRNA-Met
NZ_CP116044.1	RefSeq	gene	1568774	1568848	.	-	.	ID=gene-PHA55_RS07575;Name=PHA55_RS07575;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS07575;old_locus_tag=PHA55_07570
NZ_CP116044.1	tRNAscan-SE	tRNA	1568774	1568848	.	-	.	ID=rna-PHA55_RS07575;Parent=gene-PHA55_RS07575;anticodon=(pos:complement(1568814..1568816));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS07575;product=tRNA-Gln
NZ_CP116044.1	tRNAscan-SE	exon	1568774	1568848	.	-	.	ID=exon-PHA55_RS07575-1;Parent=rna-PHA55_RS07575;anticodon=(pos:complement(1568814..1568816));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS07575;product=tRNA-Gln
NZ_CP116044.1	RefSeq	gene	1568883	1568957	.	-	.	ID=gene-PHA55_RS07580;Name=PHA55_RS07580;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS07580;old_locus_tag=PHA55_07575
NZ_CP116044.1	tRNAscan-SE	tRNA	1568883	1568957	.	-	.	ID=rna-PHA55_RS07580;Parent=gene-PHA55_RS07580;anticodon=(pos:complement(1568923..1568925));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS07580;product=tRNA-Gln
NZ_CP116044.1	tRNAscan-SE	exon	1568883	1568957	.	-	.	ID=exon-PHA55_RS07580-1;Parent=rna-PHA55_RS07580;anticodon=(pos:complement(1568923..1568925));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS07580;product=tRNA-Gln
NZ_CP116044.1	RefSeq	gene	1568981	1569065	.	-	.	ID=gene-PHA55_RS07585;Name=PHA55_RS07585;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS07585;old_locus_tag=PHA55_07580
NZ_CP116044.1	tRNAscan-SE	tRNA	1568981	1569065	.	-	.	ID=rna-PHA55_RS07585;Parent=gene-PHA55_RS07585;anticodon=(pos:complement(1569029..1569031));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS07585;product=tRNA-Leu
NZ_CP116044.1	tRNAscan-SE	exon	1568981	1569065	.	-	.	ID=exon-PHA55_RS07585-1;Parent=rna-PHA55_RS07585;anticodon=(pos:complement(1569029..1569031));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS07585;product=tRNA-Leu
NZ_CP116044.1	RefSeq	gene	1569074	1569150	.	-	.	ID=gene-PHA55_RS07590;Name=PHA55_RS07590;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS07590;old_locus_tag=PHA55_07585
NZ_CP116044.1	tRNAscan-SE	tRNA	1569074	1569150	.	-	.	ID=rna-PHA55_RS07590;Parent=gene-PHA55_RS07590;anticodon=(pos:complement(1569114..1569116));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS07590;product=tRNA-Met
NZ_CP116044.1	tRNAscan-SE	exon	1569074	1569150	.	-	.	ID=exon-PHA55_RS07590-1;Parent=rna-PHA55_RS07590;anticodon=(pos:complement(1569114..1569116));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS07590;product=tRNA-Met
NZ_CP116044.1	RefSeq	gene	1569531	1571195	.	-	.	ID=gene-PHA55_RS07595;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=PHA55_RS07595;old_locus_tag=PHA55_07590
NZ_CP116044.1	Protein Homology	CDS	1569531	1571195	.	-	0	ID=cds-WP_000337066.1;Parent=gene-PHA55_RS07595;Dbxref=Genbank:WP_000337066.1;Name=WP_000337066.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=PHA55_RS07595;product=asparagine synthase B;protein_id=WP_000337066.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1571452	1572204	.	-	.	ID=gene-PHA55_RS07600;Name=nagD;gbkey=Gene;gene=nagD;gene_biotype=protein_coding;locus_tag=PHA55_RS07600;old_locus_tag=PHA55_07595
NZ_CP116044.1	Protein Homology	CDS	1571452	1572204	.	-	0	ID=cds-WP_000153129.1;Parent=gene-PHA55_RS07600;Dbxref=Genbank:WP_000153129.1;Name=WP_000153129.1;gbkey=CDS;gene=nagD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308732.1;locus_tag=PHA55_RS07600;product=ribonucleotide monophosphatase NagD;protein_id=WP_000153129.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1572252	1573472	.	-	.	ID=gene-PHA55_RS07605;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=nagR;locus_tag=PHA55_RS07605;old_locus_tag=PHA55_07600
NZ_CP116044.1	Protein Homology	CDS	1572252	1573472	.	-	0	ID=cds-WP_000187594.1;Parent=gene-PHA55_RS07605;Dbxref=Genbank:WP_000187594.1;Name=WP_000187594.1;gbkey=CDS;gene=nagC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308733.1;locus_tag=PHA55_RS07605;product=DNA-binding transcriptional regulator NagC;protein_id=WP_000187594.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1573481	1574629	.	-	.	ID=gene-PHA55_RS07610;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=PHA55_RS07610;old_locus_tag=PHA55_07605
NZ_CP116044.1	Protein Homology	CDS	1573481	1574629	.	-	0	ID=cds-WP_000271153.1;Parent=gene-PHA55_RS07610;Dbxref=Genbank:WP_000271153.1;Name=WP_000271153.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308734.1;locus_tag=PHA55_RS07610;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_000271153.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1574689	1575489	.	-	.	ID=gene-PHA55_RS07615;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=PHA55_RS07615;old_locus_tag=PHA55_07610
NZ_CP116044.1	Protein Homology	CDS	1574689	1575489	.	-	0	ID=cds-WP_001237072.1;Parent=gene-PHA55_RS07615;Dbxref=Genbank:WP_001237072.1;Name=WP_001237072.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=PHA55_RS07615;product=glucosamine-6-phosphate deaminase;protein_id=WP_001237072.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1575822	1577768	.	+	.	ID=gene-PHA55_RS07620;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=PHA55_RS07620;old_locus_tag=PHA55_07615
NZ_CP116044.1	Protein Homology	CDS	1575822	1577768	.	+	0	ID=cds-WP_001023104.1;Parent=gene-PHA55_RS07620;Dbxref=Genbank:WP_001023104.1;Name=WP_001023104.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308736.1;locus_tag=PHA55_RS07620;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=WP_001023104.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1577738	1577860	.	-	.	ID=gene-PHA55_RS07625;Name=PHA55_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS07625;old_locus_tag=PHA55_07620
NZ_CP116044.1	GeneMarkS-2+	CDS	1577738	1577860	.	-	0	ID=cds-WP_001297734.1;Parent=gene-PHA55_RS07625;Dbxref=Genbank:WP_001297734.1;Name=WP_001297734.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA55_RS07625;product=hypothetical protein;protein_id=WP_001297734.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1577971	1579635	.	+	.	ID=gene-PHA55_RS07630;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=PHA55_RS07630;old_locus_tag=PHA55_07625
NZ_CP116044.1	Protein Homology	CDS	1577971	1579635	.	+	0	ID=cds-WP_001287154.1;Parent=gene-PHA55_RS07630;Dbxref=Genbank:WP_001287154.1;Name=WP_001287154.1;Ontology_term=GO:0006425,GO:0004819,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=glutamine-tRNA ligase activity|0004819||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415206.1;locus_tag=PHA55_RS07630;product=glutamine--tRNA ligase;protein_id=WP_001287154.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1580081	1581487	.	+	.	ID=gene-PHA55_RS07635;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=PHA55_RS07635;old_locus_tag=PHA55_07630
NZ_CP116044.1	Protein Homology	CDS	1580081	1581487	.	+	0	ID=cds-WP_001258839.1;Parent=gene-PHA55_RS07635;Dbxref=Genbank:WP_001258839.1;Name=WP_001258839.1;gbkey=CDS;gene=chiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415207.1;locus_tag=PHA55_RS07635;product=chitoporin;protein_id=WP_001258839.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1581537	1581863	.	+	.	ID=gene-PHA55_RS07640;Name=chiQ;gbkey=Gene;gene=chiQ;gene_biotype=protein_coding;locus_tag=PHA55_RS07640;old_locus_tag=PHA55_07635
NZ_CP116044.1	Protein Homology	CDS	1581537	1581863	.	+	0	ID=cds-WP_000733592.1;Parent=gene-PHA55_RS07640;Dbxref=Genbank:WP_000733592.1;Name=WP_000733592.1;gbkey=CDS;gene=chiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308740.1;locus_tag=PHA55_RS07640;product=ChiQ/YbfN family lipoprotein;protein_id=WP_000733592.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1581948	1582394	.	-	.	ID=gene-PHA55_RS07645;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=PHA55_RS07645;old_locus_tag=PHA55_07640
NZ_CP116044.1	Protein Homology	CDS	1581948	1582394	.	-	0	ID=cds-WP_000131702.1;Parent=gene-PHA55_RS07645;Dbxref=Genbank:WP_000131702.1;Name=WP_000131702.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308741.1;locus_tag=PHA55_RS07645;product=ferric iron uptake transcriptional regulator;protein_id=WP_000131702.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1582387	1582473	.	-	.	ID=gene-PHA55_RS07650;Name=uof;gbkey=Gene;gene=uof;gene_biotype=protein_coding;locus_tag=PHA55_RS07650;old_locus_tag=PHA55_07645
NZ_CP116044.1	Protein Homology	CDS	1582387	1582473	.	-	0	ID=cds-WP_001406816.1;Parent=gene-PHA55_RS07650;Dbxref=Genbank:WP_001406816.1;Name=WP_001406816.1;gbkey=CDS;gene=uof;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001491546.1;locus_tag=PHA55_RS07650;product=fur leader peptide;protein_id=WP_001406816.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1582683	1583213	.	-	.	ID=gene-PHA55_RS07655;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=PHA55_RS07655;old_locus_tag=PHA55_07650
NZ_CP116044.1	Protein Homology	CDS	1582683	1583213	.	-	0	ID=cds-WP_001018618.1;Parent=gene-PHA55_RS07655;Dbxref=Genbank:WP_001018618.1;Name=WP_001018618.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308742.1;locus_tag=PHA55_RS07655;product=flavodoxin FldA;protein_id=WP_001018618.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1583353	1583646	.	-	.	ID=gene-PHA55_RS07660;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=PHA55_RS07660;old_locus_tag=PHA55_07655
NZ_CP116044.1	Protein Homology	CDS	1583353	1583646	.	-	0	ID=cds-WP_001300829.1;Parent=gene-PHA55_RS07660;Dbxref=Genbank:WP_001300829.1;Name=WP_001300829.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415211.2;locus_tag=PHA55_RS07660;product=LexA regulated protein;protein_id=WP_001300829.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1583786	1584550	.	-	.	ID=gene-PHA55_RS07665;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=PHA55_RS07665;old_locus_tag=PHA55_07660
NZ_CP116044.1	Protein Homology	CDS	1583786	1584550	.	-	0	ID=cds-WP_000773279.1;Parent=gene-PHA55_RS07665;Dbxref=Genbank:WP_000773279.1;Name=WP_000773279.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415212.1;locus_tag=PHA55_RS07665;product=esterase;protein_id=WP_000773279.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1584735	1585280	.	+	.	ID=gene-PHA55_RS07670;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=PHA55_RS07670;old_locus_tag=PHA55_07665
NZ_CP116044.1	Protein Homology	CDS	1584735	1585280	.	+	0	ID=cds-WP_000848387.1;Parent=gene-PHA55_RS07670;Dbxref=Genbank:WP_000848387.1;Name=WP_000848387.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415213.1;locus_tag=PHA55_RS07670;product=replication initiation negative regulator SeqA;protein_id=WP_000848387.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1585306	1586946	.	+	.	ID=gene-PHA55_RS07675;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=PHA55_RS07675;old_locus_tag=PHA55_07670
NZ_CP116044.1	Protein Homology	CDS	1585306	1586946	.	+	0	ID=cds-WP_000974363.1;Parent=gene-PHA55_RS07675;Dbxref=Genbank:WP_000974363.1;Name=WP_000974363.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308746.1;locus_tag=PHA55_RS07675;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_000974363.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1587002	1588321	.	-	.	ID=gene-PHA55_RS07680;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=PHA55_RS07680;old_locus_tag=PHA55_07675
NZ_CP116044.1	Protein Homology	CDS	1587002	1588321	.	-	0	ID=cds-WP_000075845.1;Parent=gene-PHA55_RS07680;Dbxref=Genbank:WP_000075845.1;Name=WP_000075845.1;Ontology_term=GO:0015822,GO:0015847,GO:0055085,GO:0015496,GO:0016020;gbkey=CDS;gene=potE;go_component=membrane|0016020||IEA;go_function=putrescine:ornithine antiporter activity|0015496||IEA;go_process=ornithine transport|0015822||IEA,putrescine transport|0015847||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415219.1;locus_tag=PHA55_RS07680;product=putrescine-ornithine antiporter;protein_id=WP_000075845.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1588318	1590516	.	-	.	ID=gene-PHA55_RS07685;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=PHA55_RS07685;old_locus_tag=PHA55_07680
NZ_CP116044.1	Protein Homology	CDS	1588318	1590516	.	-	0	ID=cds-WP_001297242.1;Parent=gene-PHA55_RS07685;Dbxref=Genbank:WP_001297242.1;Name=WP_001297242.1;Ontology_term=GO:0006520,GO:0004586;gbkey=CDS;gene=speF;go_function=ornithine decarboxylase activity|0004586||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308748.1;locus_tag=PHA55_RS07685;product=ornithine decarboxylase SpeF;protein_id=WP_001297242.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1590827	1590931	.	-	.	ID=gene-PHA55_RS07690;Name=speFL;gbkey=Gene;gene=speFL;gene_biotype=protein_coding;locus_tag=PHA55_RS07690;old_locus_tag=PHA55_07685
NZ_CP116044.1	Protein Homology	CDS	1590827	1590931	.	-	0	ID=cds-WP_001312672.1;Parent=gene-PHA55_RS07690;Dbxref=Genbank:WP_001312672.1;Name=WP_001312672.1;gbkey=CDS;gene=speFL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051176.1;locus_tag=PHA55_RS07690;product=leader peptide SpeFL;protein_id=WP_001312672.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1591206	1591883	.	-	.	ID=gene-PHA55_RS07695;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=PHA55_RS07695;old_locus_tag=PHA55_07690
NZ_CP116044.1	Protein Homology	CDS	1591206	1591883	.	-	0	ID=cds-WP_000186103.1;Parent=gene-PHA55_RS07695;Dbxref=Genbank:WP_000186103.1;Name=WP_000186103.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459687.1;locus_tag=PHA55_RS07695;product=two-component system response regulator KdpE;protein_id=WP_000186103.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1591880	1594564	.	-	.	ID=gene-PHA55_RS07700;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=PHA55_RS07700;old_locus_tag=PHA55_07695
NZ_CP116044.1	Protein Homology	CDS	1591880	1594564	.	-	0	ID=cds-WP_001297245.1;Parent=gene-PHA55_RS07700;Dbxref=Genbank:WP_001297245.1;Name=WP_001297245.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308750.1;locus_tag=PHA55_RS07700;product=two-component system sensor histidine kinase KdpD;protein_id=WP_001297245.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1594557	1595129	.	-	.	ID=gene-PHA55_RS07705;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=PHA55_RS07705;old_locus_tag=PHA55_07700
NZ_CP116044.1	Protein Homology	CDS	1594557	1595129	.	-	0	ID=cds-WP_001297248.1;Parent=gene-PHA55_RS07705;Dbxref=Genbank:WP_001297248.1;Name=WP_001297248.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpC;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415224.1;locus_tag=PHA55_RS07705;product=K(+)-transporting ATPase subunit C;protein_id=WP_001297248.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1595138	1597186	.	-	.	ID=gene-PHA55_RS07710;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=PHA55_RS07710;old_locus_tag=PHA55_07705
NZ_CP116044.1	Protein Homology	CDS	1595138	1597186	.	-	0	ID=cds-WP_000087967.1;Parent=gene-PHA55_RS07710;Dbxref=Genbank:WP_000087967.1;Name=WP_000087967.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpB;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415225.1;locus_tag=PHA55_RS07710;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_000087967.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1597209	1598882	.	-	.	ID=gene-PHA55_RS07715;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=PHA55_RS07715;old_locus_tag=PHA55_07710
NZ_CP116044.1	Protein Homology	CDS	1597209	1598882	.	-	0	ID=cds-WP_000741137.1;Parent=gene-PHA55_RS07715;Dbxref=Genbank:WP_000741137.1;Name=WP_000741137.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415226.1;locus_tag=PHA55_RS07715;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_000741137.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1598882	1598971	.	-	.	ID=gene-PHA55_RS07720;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=PHA55_RS07720;old_locus_tag=PHA55_07715
NZ_CP116044.1	Protein Homology	CDS	1598882	1598971	.	-	0	ID=cds-WP_001272653.1;Parent=gene-PHA55_RS07720;Dbxref=Genbank:WP_001272653.1;Name=WP_001272653.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588443.1;locus_tag=PHA55_RS07720;product=K(+)-transporting ATPase subunit F;protein_id=WP_001272653.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1599284	1599490	.	+	.	ID=gene-PHA55_RS07725;Name=ybfA;gbkey=Gene;gene=ybfA;gene_biotype=protein_coding;locus_tag=PHA55_RS07725;old_locus_tag=PHA55_07720
NZ_CP116044.1	Protein Homology	CDS	1599284	1599490	.	+	0	ID=cds-WP_000424924.1;Parent=gene-PHA55_RS07725;Dbxref=Genbank:WP_000424924.1;Name=WP_000424924.1;gbkey=CDS;gene=ybfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308755.1;locus_tag=PHA55_RS07725;product=YbfA family protein;protein_id=WP_000424924.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1599733	1603926	.	+	.	ID=gene-PHA55_RS07730;Name=rhsC;gbkey=Gene;gene=rhsC;gene_biotype=protein_coding;locus_tag=PHA55_RS07730;old_locus_tag=PHA55_07725
NZ_CP116044.1	Protein Homology	CDS	1599733	1603926	.	+	0	ID=cds-WP_271287508.1;Parent=gene-PHA55_RS07730;Dbxref=Genbank:WP_271287508.1;Name=WP_271287508.1;gbkey=CDS;gene=rhsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415229.1;locus_tag=PHA55_RS07730;product=rhs element protein RhsC;protein_id=WP_271287508.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1603926	1604252	.	+	.	ID=gene-PHA55_RS07735;Name=ybfB;gbkey=Gene;gene=ybfB;gene_biotype=protein_coding;locus_tag=PHA55_RS07735;old_locus_tag=PHA55_07730
NZ_CP116044.1	Protein Homology	CDS	1603926	1604252	.	+	0	ID=cds-WP_000873944.1;Parent=gene-PHA55_RS07735;Dbxref=Genbank:WP_000873944.1;Name=WP_000873944.1;gbkey=CDS;gene=ybfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415230.1;locus_tag=PHA55_RS07735;product=protein YbfB;protein_id=WP_000873944.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	1604283	1605803	.	+	.	ID=gene-PHA55_RS07740;Name=PHA55_RS07740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS07740;old_locus_tag=PHA55_07735;partial=true;pseudo=true;start_range=.,1604283
NZ_CP116044.1	Protein Homology	CDS	1604283	1605803	.	+	0	ID=cds-PHA55_RS07740;Parent=gene-PHA55_RS07740;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308756.1;locus_tag=PHA55_RS07740;partial=true;product=RHS repeat protein;pseudo=true;start_range=.,1604283;transl_table=11
NZ_CP116044.1	RefSeq	gene	1605800	1606369	.	+	.	ID=gene-PHA55_RS07745;Name=ybfC;gbkey=Gene;gene=ybfC;gene_biotype=protein_coding;locus_tag=PHA55_RS07745;old_locus_tag=PHA55_07740
NZ_CP116044.1	Protein Homology	CDS	1605800	1606369	.	+	0	ID=cds-WP_000832338.1;Parent=gene-PHA55_RS07745;Dbxref=Genbank:WP_000832338.1;Name=WP_000832338.1;gbkey=CDS;gene=ybfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415232.1;locus_tag=PHA55_RS07745;product=protein YbfC;protein_id=WP_000832338.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	1606595	1606828	.	+	.	ID=gene-PHA55_RS07750;Name=ybfQ;end_range=1606828,.;gbkey=Gene;gene=ybfQ;gene_biotype=pseudogene;locus_tag=PHA55_RS07750;old_locus_tag=PHA55_07745;partial=true;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	1606595	1606828	.	+	0	ID=cds-PHA55_RS07750;Parent=gene-PHA55_RS07750;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1606828,.;gbkey=CDS;gene=ybfQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=PHA55_RS07750;partial=true;product=ISAs1 family transposase;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	1606975	1607733	.	+	.	ID=gene-PHA55_RS07755;Name=ybfD;end_range=1607733,.;gbkey=Gene;gene=ybfD;gene_biotype=pseudogene;locus_tag=PHA55_RS07755;old_locus_tag=PHA55_07750;partial=true;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	1606975	1607733	.	+	0	ID=cds-PHA55_RS07755;Parent=gene-PHA55_RS07755;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=1607733,.;gbkey=CDS;gene=ybfD;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=PHA55_RS07755;partial=true;product=ISAs1 family transposase;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	1607884	1608393	.	+	.	ID=gene-PHA55_RS07760;Name=ybgA;gbkey=Gene;gene=ybgA;gene_biotype=protein_coding;locus_tag=PHA55_RS07760;old_locus_tag=PHA55_07755
NZ_CP116044.1	Protein Homology	CDS	1607884	1608393	.	+	0	ID=cds-WP_001076014.1;Parent=gene-PHA55_RS07760;Dbxref=Genbank:WP_001076014.1;Name=WP_001076014.1;gbkey=CDS;gene=ybgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415235.1;locus_tag=PHA55_RS07760;product=YbgA family protein;protein_id=WP_001076014.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1608390	1609808	.	+	.	ID=gene-PHA55_RS07765;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=PHA55_RS07765;old_locus_tag=PHA55_07760
NZ_CP116044.1	Protein Homology	CDS	1608390	1609808	.	+	0	ID=cds-WP_038997141.1;Parent=gene-PHA55_RS07765;Dbxref=Genbank:WP_038997141.1;Name=WP_038997141.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740284.1;locus_tag=PHA55_RS07765;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_038997141.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1609850	1611331	.	-	.	ID=gene-PHA55_RS07770;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=protein_coding;locus_tag=PHA55_RS07770;old_locus_tag=PHA55_07765
NZ_CP116044.1	Protein Homology	CDS	1609850	1611331	.	-	0	ID=cds-WP_001032694.1;Parent=gene-PHA55_RS07770;Dbxref=Genbank:WP_001032694.1;Name=WP_001032694.1;gbkey=CDS;gene=dtpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706523.1;locus_tag=PHA55_RS07770;product=dipeptide permease DtpD;protein_id=WP_001032694.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1611602	1612345	.	+	.	ID=gene-PHA55_RS07775;Name=ybgI;gbkey=Gene;gene=ybgI;gene_biotype=protein_coding;locus_tag=PHA55_RS07775;old_locus_tag=PHA55_07770
NZ_CP116044.1	Protein Homology	CDS	1611602	1612345	.	+	0	ID=cds-WP_000798871.1;Parent=gene-PHA55_RS07775;Dbxref=Genbank:WP_000798871.1;Name=WP_000798871.1;gbkey=CDS;gene=ybgI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=PHA55_RS07775;product=radiation resistance protein YbgI;protein_id=WP_000798871.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1612368	1613024	.	+	.	ID=gene-PHA55_RS07780;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=PHA55_RS07780;old_locus_tag=PHA55_07775
NZ_CP116044.1	Protein Homology	CDS	1612368	1613024	.	+	0	ID=cds-WP_001188343.1;Parent=gene-PHA55_RS07780;Dbxref=Genbank:WP_001188343.1;Name=WP_001188343.1;gbkey=CDS;gene=pxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308763.1;locus_tag=PHA55_RS07780;product=5-oxoprolinase subunit PxpB;protein_id=WP_001188343.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1613018	1613950	.	+	.	ID=gene-PHA55_RS07785;Name=pxpC;gbkey=Gene;gene=pxpC;gene_biotype=protein_coding;locus_tag=PHA55_RS07785;old_locus_tag=PHA55_07780
NZ_CP116044.1	Protein Homology	CDS	1613018	1613950	.	+	0	ID=cds-WP_000912716.1;Parent=gene-PHA55_RS07785;Dbxref=Genbank:WP_000912716.1;Name=WP_000912716.1;gbkey=CDS;gene=pxpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308764.1;locus_tag=PHA55_RS07785;product=5-oxoprolinase subunit PxpC;protein_id=WP_000912716.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1613940	1614674	.	+	.	ID=gene-PHA55_RS07790;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=PHA55_RS07790;old_locus_tag=PHA55_07785
NZ_CP116044.1	Protein Homology	CDS	1613940	1614674	.	+	0	ID=cds-WP_000687131.1;Parent=gene-PHA55_RS07790;Dbxref=Genbank:WP_000687131.1;Name=WP_000687131.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706520.1;locus_tag=PHA55_RS07790;product=5-oxoprolinase subunit PxpA;protein_id=WP_000687131.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1614710	1615501	.	+	.	ID=gene-PHA55_RS07795;Name=nei;gbkey=Gene;gene=nei;gene_biotype=protein_coding;locus_tag=PHA55_RS07795;old_locus_tag=PHA55_07790
NZ_CP116044.1	Protein Homology	CDS	1614710	1615501	.	+	0	ID=cds-WP_001114036.1;Parent=gene-PHA55_RS07795;Dbxref=Genbank:WP_001114036.1;Name=WP_001114036.1;Ontology_term=GO:0006281,GO:0000703,GO:0003677,GO:0008270,GO:0140078;gbkey=CDS;gene=nei;go_function=oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity|0000703||IEA,DNA binding|0003677||IEA,zinc ion binding|0008270||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308766.1;locus_tag=PHA55_RS07795;product=endonuclease VIII;protein_id=WP_001114036.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1615498	1616544	.	-	.	ID=gene-PHA55_RS07800;Name=abrB;gbkey=Gene;gene=abrB;gene_biotype=protein_coding;locus_tag=PHA55_RS07800;old_locus_tag=PHA55_07795
NZ_CP116044.1	Protein Homology	CDS	1615498	1616544	.	-	0	ID=cds-WP_001297246.1;Parent=gene-PHA55_RS07800;Dbxref=Genbank:WP_001297246.1;Name=WP_001297246.1;gbkey=CDS;gene=abrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415243.4;locus_tag=PHA55_RS07800;product=AbrB family transcriptional regulator;protein_id=WP_001297246.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1616696	1617757	.	-	.	ID=gene-PHA55_RS07805;Name=ybgO;gbkey=Gene;gene=ybgO;gene_biotype=protein_coding;locus_tag=PHA55_RS07805;old_locus_tag=PHA55_07800
NZ_CP116044.1	Protein Homology	CDS	1616696	1617757	.	-	0	ID=cds-WP_001272420.1;Parent=gene-PHA55_RS07805;Dbxref=Genbank:WP_001272420.1;Name=WP_001272420.1;gbkey=CDS;gene=ybgO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415244.4;locus_tag=PHA55_RS07805;product=fimbrial protein;protein_id=WP_001272420.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1617754	1618485	.	-	.	ID=gene-PHA55_RS07810;Name=ybgP;gbkey=Gene;gene=ybgP;gene_biotype=protein_coding;locus_tag=PHA55_RS07810;old_locus_tag=PHA55_07805
NZ_CP116044.1	Protein Homology	CDS	1617754	1618485	.	-	0	ID=cds-WP_038995863.1;Parent=gene-PHA55_RS07810;Dbxref=Genbank:WP_038995863.1;Name=WP_038995863.1;gbkey=CDS;gene=ybgP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706517.2;locus_tag=PHA55_RS07810;product=molecular chaperone;protein_id=WP_038995863.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1618500	1620959	.	-	.	ID=gene-PHA55_RS07815;Name=ybgQ;gbkey=Gene;gene=ybgQ;gene_biotype=protein_coding;locus_tag=PHA55_RS07815;old_locus_tag=PHA55_07810
NZ_CP116044.1	Protein Homology	CDS	1618500	1620959	.	-	0	ID=cds-WP_001316936.1;Parent=gene-PHA55_RS07815;Dbxref=Genbank:WP_001316936.1;Name=WP_001316936.1;gbkey=CDS;gene=ybgQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706516.2;locus_tag=PHA55_RS07815;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_001316936.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1621010	1621576	.	-	.	ID=gene-PHA55_RS07820;Name=PHA55_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS07820;old_locus_tag=PHA55_07815
NZ_CP116044.1	Protein Homology	CDS	1621010	1621576	.	-	0	ID=cds-WP_000472422.1;Parent=gene-PHA55_RS07820;Dbxref=Genbank:WP_000472422.1;Name=WP_000472422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706515.1;locus_tag=PHA55_RS07820;product=fimbrial protein;protein_id=WP_000472422.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1621967	1623250	.	-	.	ID=gene-PHA55_RS07825;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=PHA55_RS07825;old_locus_tag=PHA55_07820
NZ_CP116044.1	Protein Homology	CDS	1621967	1623250	.	-	0	ID=cds-WP_000785834.1;Parent=gene-PHA55_RS07825;Dbxref=Genbank:WP_000785834.1;Name=WP_000785834.1;Ontology_term=GO:0006099,GO:0004108;gbkey=CDS;gene=gltA;go_function=citrate (Si)-synthase activity|0004108||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415248.1;locus_tag=PHA55_RS07825;product=citrate synthase;protein_id=WP_000785834.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1623456	1623563	.	-	.	ID=gene-PHA55_RS07830;Name=PHA55_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS07830;old_locus_tag=PHA55_07825
NZ_CP116044.1	Protein Homology	CDS	1623456	1623563	.	-	0	ID=cds-WP_001305582.1;Parent=gene-PHA55_RS07830;Dbxref=Genbank:WP_001305582.1;Name=WP_001305582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518759.1;locus_tag=PHA55_RS07830;product=hypothetical protein;protein_id=WP_001305582.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1623944	1624348	.	+	.	ID=gene-PHA55_RS07835;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=PHA55_RS07835;old_locus_tag=PHA55_07830
NZ_CP116044.1	Protein Homology	CDS	1623944	1624348	.	+	0	ID=cds-WP_000263347.1;Parent=gene-PHA55_RS07835;Dbxref=Genbank:WP_000263347.1;Name=WP_000263347.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045281;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,succinate dehydrogenase complex|0045281||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263334.1;locus_tag=PHA55_RS07835;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WP_000263347.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1624342	1624689	.	+	.	ID=gene-PHA55_RS07840;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=PHA55_RS07840;old_locus_tag=PHA55_07835
NZ_CP116044.1	Protein Homology	CDS	1624342	1624689	.	+	0	ID=cds-WP_000254365.1;Parent=gene-PHA55_RS07840;Dbxref=Genbank:WP_000254365.1;Name=WP_000254365.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415250.1;locus_tag=PHA55_RS07840;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_000254365.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1624689	1626455	.	+	.	ID=gene-PHA55_RS07845;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=PHA55_RS07845;old_locus_tag=PHA55_07840
NZ_CP116044.1	Protein Homology	CDS	1624689	1626455	.	+	0	ID=cds-WP_000775540.1;Parent=gene-PHA55_RS07845;Dbxref=Genbank:WP_000775540.1;Name=WP_000775540.1;Ontology_term=GO:0006099,GO:0022900,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=PHA55_RS07845;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_000775540.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1626471	1627187	.	+	.	ID=gene-PHA55_RS07850;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=PHA55_RS07850;old_locus_tag=PHA55_07845
NZ_CP116044.1	Protein Homology	CDS	1626471	1627187	.	+	0	ID=cds-WP_001235263.1;Parent=gene-PHA55_RS07850;Dbxref=Genbank:WP_001235263.1;Name=WP_001235263.1;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=PHA55_RS07850;product=succinate dehydrogenase iron-sulfur subunit SdhB;protein_id=WP_001235263.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1627388	1630189	.	+	.	ID=gene-PHA55_RS07855;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=PHA55_RS07855;old_locus_tag=PHA55_07850
NZ_CP116044.1	Protein Homology	CDS	1627388	1630189	.	+	0	ID=cds-WP_001181473.1;Parent=gene-PHA55_RS07855;Dbxref=Genbank:WP_001181473.1;Name=WP_001181473.1;Ontology_term=GO:0006099,GO:0006554,GO:0006568,GO:0004591,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,lysine catabolic process|0006554||IEA,tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308778.1;locus_tag=PHA55_RS07855;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_001181473.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1630204	1631421	.	+	.	ID=gene-PHA55_RS07860;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=PHA55_RS07860;old_locus_tag=PHA55_07855
NZ_CP116044.1	Protein Homology	CDS	1630204	1631421	.	+	0	ID=cds-WP_000099834.1;Parent=gene-PHA55_RS07860;Dbxref=Genbank:WP_000099834.1;Name=WP_000099834.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308779.1;locus_tag=PHA55_RS07860;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_000099834.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1631515	1632681	.	+	.	ID=gene-PHA55_RS07865;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=PHA55_RS07865;old_locus_tag=PHA55_07860
NZ_CP116044.1	Protein Homology	CDS	1631515	1632681	.	+	0	ID=cds-WP_001048602.1;Parent=gene-PHA55_RS07865;Dbxref=Genbank:WP_001048602.1;Name=WP_001048602.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=PHA55_RS07865;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_001048602.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1632681	1633550	.	+	.	ID=gene-PHA55_RS07870;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=PHA55_RS07870;old_locus_tag=PHA55_07865
NZ_CP116044.1	Protein Homology	CDS	1632681	1633550	.	+	0	ID=cds-WP_000025458.1;Parent=gene-PHA55_RS07870;Dbxref=Genbank:WP_000025458.1;Name=WP_000025458.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308781.1;locus_tag=PHA55_RS07870;product=succinate--CoA ligase subunit alpha;protein_id=WP_000025458.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1633654	1634376	.	-	.	ID=gene-PHA55_RS07875;Name=mngR;gbkey=Gene;gene=mngR;gene_biotype=protein_coding;locus_tag=PHA55_RS07875;old_locus_tag=PHA55_07870
NZ_CP116044.1	Protein Homology	CDS	1633654	1634376	.	-	0	ID=cds-WP_000509899.1;Parent=gene-PHA55_RS07875;Dbxref=Genbank:WP_000509899.1;Name=WP_000509899.1;gbkey=CDS;gene=mngR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415258.1;locus_tag=PHA55_RS07875;product=mannosyl-D-glycerate transport/metabolism system transcriptional repressor MngR;protein_id=WP_000509899.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1634545	1636461	.	+	.	ID=gene-PHA55_RS07880;Name=mngA;gbkey=Gene;gene=mngA;gene_biotype=protein_coding;locus_tag=PHA55_RS07880;old_locus_tag=PHA55_07875
NZ_CP116044.1	Protein Homology	CDS	1634545	1636461	.	+	0	ID=cds-WP_001054863.1;Parent=gene-PHA55_RS07880;Dbxref=Genbank:WP_001054863.1;Name=WP_001054863.1;Ontology_term=GO:0009401,GO:0005351,GO:0022877,GO:0016020;gbkey=CDS;gene=mngA;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001393949.1;locus_tag=PHA55_RS07880;product=PTS 2-O-a-mannosyl-D-glycerate transporter subunit IIABC;protein_id=WP_001054863.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1636479	1639112	.	+	.	ID=gene-PHA55_RS07885;Name=mngB;gbkey=Gene;gene=mngB;gene_biotype=protein_coding;locus_tag=PHA55_RS07885;old_locus_tag=PHA55_07880
NZ_CP116044.1	Protein Homology	CDS	1636479	1639112	.	+	0	ID=cds-WP_033817351.1;Parent=gene-PHA55_RS07885;Dbxref=Genbank:WP_033817351.1;Name=WP_033817351.1;Ontology_term=GO:0006013,GO:0004559;gbkey=CDS;gene=mngB;go_function=alpha-mannosidase activity|0004559||IEA;go_process=mannose metabolic process|0006013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415260.1;locus_tag=PHA55_RS07885;product=mannosylglycerate hydrolase;protein_id=WP_033817351.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1639960	1641528	.	+	.	ID=gene-PHA55_RS07890;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=PHA55_RS07890;old_locus_tag=PHA55_07885
NZ_CP116044.1	Protein Homology	CDS	1639960	1641528	.	+	0	ID=cds-WP_000884361.1;Parent=gene-PHA55_RS07890;Dbxref=Genbank:WP_000884361.1;Name=WP_000884361.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415261.2;locus_tag=PHA55_RS07890;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_000884361.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1641544	1642683	.	+	.	ID=gene-PHA55_RS07895;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=PHA55_RS07895;old_locus_tag=PHA55_07890
NZ_CP116044.1	Protein Homology	CDS	1641544	1642683	.	+	0	ID=cds-WP_000568275.1;Parent=gene-PHA55_RS07895;Dbxref=Genbank:WP_000568275.1;Name=WP_000568275.1;Ontology_term=GO:0016020;gbkey=CDS;gene=cydB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=PHA55_RS07895;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000568275.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1642698	1642811	.	+	.	ID=gene-PHA55_RS07900;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=PHA55_RS07900;old_locus_tag=PHA55_07895
NZ_CP116044.1	Protein Homology	CDS	1642698	1642811	.	+	0	ID=cds-WP_000270282.1;Parent=gene-PHA55_RS07900;Dbxref=Genbank:WP_000270282.1;Name=WP_000270282.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588444.1;locus_tag=PHA55_RS07900;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_000270282.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1642811	1643104	.	+	.	ID=gene-PHA55_RS07905;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=PHA55_RS07905;old_locus_tag=PHA55_07900
NZ_CP116044.1	Protein Homology	CDS	1642811	1643104	.	+	0	ID=cds-WP_000034602.1;Parent=gene-PHA55_RS07905;Dbxref=Genbank:WP_000034602.1;Name=WP_000034602.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308797.1;locus_tag=PHA55_RS07905;product=cyd operon protein YbgE;protein_id=WP_000034602.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1643254	1643658	.	+	.	ID=gene-PHA55_RS07910;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=PHA55_RS07910;old_locus_tag=PHA55_07905
NZ_CP116044.1	Protein Homology	CDS	1643254	1643658	.	+	0	ID=cds-WP_001098384.1;Parent=gene-PHA55_RS07910;Dbxref=Genbank:WP_001098384.1;Name=WP_001098384.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308798.1;locus_tag=PHA55_RS07910;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_001098384.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1643655	1644347	.	+	.	ID=gene-PHA55_RS07915;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=PHA55_RS07915;old_locus_tag=PHA55_07910
NZ_CP116044.1	Protein Homology	CDS	1643655	1644347	.	+	0	ID=cds-WP_000131314.1;Parent=gene-PHA55_RS07915;Dbxref=Genbank:WP_000131314.1;Name=WP_000131314.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308799.1;locus_tag=PHA55_RS07915;product=Tol-Pal system protein TolQ;protein_id=WP_000131314.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1644351	1644779	.	+	.	ID=gene-PHA55_RS07920;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=PHA55_RS07920;old_locus_tag=PHA55_07915
NZ_CP116044.1	Protein Homology	CDS	1644351	1644779	.	+	0	ID=cds-WP_000090097.1;Parent=gene-PHA55_RS07920;Dbxref=Genbank:WP_000090097.1;Name=WP_000090097.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=PHA55_RS07920;product=colicin uptake protein TolR;protein_id=WP_000090097.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1644844	1646109	.	+	.	ID=gene-PHA55_RS07925;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=PHA55_RS07925;old_locus_tag=PHA55_07920
NZ_CP116044.1	Protein Homology	CDS	1644844	1646109	.	+	0	ID=cds-WP_000030637.1;Parent=gene-PHA55_RS07925;Dbxref=Genbank:WP_000030637.1;Name=WP_000030637.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415267.1;locus_tag=PHA55_RS07925;product=cell envelope integrity protein TolA;protein_id=WP_000030637.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1646242	1647534	.	+	.	ID=gene-PHA55_RS07930;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=PHA55_RS07930;old_locus_tag=PHA55_07925
NZ_CP116044.1	Protein Homology	CDS	1646242	1647534	.	+	0	ID=cds-WP_015953116.1;Parent=gene-PHA55_RS07930;Dbxref=Genbank:WP_015953116.1;Name=WP_015953116.1;Ontology_term=GO:0006810,GO:0005215,GO:0030288;gbkey=CDS;gene=tolB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=PHA55_RS07930;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_015953116.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1647569	1648090	.	+	.	ID=gene-PHA55_RS07935;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=PHA55_RS07935;old_locus_tag=PHA55_07930
NZ_CP116044.1	Protein Homology	CDS	1647569	1648090	.	+	0	ID=cds-WP_001295306.1;Parent=gene-PHA55_RS07935;Dbxref=Genbank:WP_001295306.1;Name=WP_001295306.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308803.1;locus_tag=PHA55_RS07935;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_001295306.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1648100	1648891	.	+	.	ID=gene-PHA55_RS07940;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=PHA55_RS07940;old_locus_tag=PHA55_07935
NZ_CP116044.1	Protein Homology	CDS	1648100	1648891	.	+	0	ID=cds-WP_000097580.1;Parent=gene-PHA55_RS07940;Dbxref=Genbank:WP_000097580.1;Name=WP_000097580.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308804.1;locus_tag=PHA55_RS07940;product=cell division protein CpoB;protein_id=WP_000097580.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1649056	1649131	.	+	.	ID=gene-PHA55_RS07945;Name=PHA55_RS07945;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS07945;old_locus_tag=PHA55_07940
NZ_CP116044.1	tRNAscan-SE	tRNA	1649056	1649131	.	+	.	ID=rna-PHA55_RS07945;Parent=gene-PHA55_RS07945;anticodon=(pos:1649089..1649091);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS07945;product=tRNA-Lys
NZ_CP116044.1	tRNAscan-SE	exon	1649056	1649131	.	+	.	ID=exon-PHA55_RS07945-1;Parent=rna-PHA55_RS07945;anticodon=(pos:1649089..1649091);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS07945;product=tRNA-Lys
NZ_CP116044.1	RefSeq	gene	1649267	1649342	.	+	.	ID=gene-PHA55_RS07950;Name=PHA55_RS07950;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS07950;old_locus_tag=PHA55_07945
NZ_CP116044.1	tRNAscan-SE	tRNA	1649267	1649342	.	+	.	ID=rna-PHA55_RS07950;Parent=gene-PHA55_RS07950;anticodon=(pos:1649300..1649302);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS07950;product=tRNA-Val
NZ_CP116044.1	tRNAscan-SE	exon	1649267	1649342	.	+	.	ID=exon-PHA55_RS07950-1;Parent=rna-PHA55_RS07950;anticodon=(pos:1649300..1649302);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS07950;product=tRNA-Val
NZ_CP116044.1	RefSeq	gene	1649345	1649420	.	+	.	ID=gene-PHA55_RS07955;Name=PHA55_RS07955;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS07955;old_locus_tag=PHA55_07950
NZ_CP116044.1	tRNAscan-SE	tRNA	1649345	1649420	.	+	.	ID=rna-PHA55_RS07955;Parent=gene-PHA55_RS07955;anticodon=(pos:1649378..1649380);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS07955;product=tRNA-Lys
NZ_CP116044.1	tRNAscan-SE	exon	1649345	1649420	.	+	.	ID=exon-PHA55_RS07955-1;Parent=rna-PHA55_RS07955;anticodon=(pos:1649378..1649380);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS07955;product=tRNA-Lys
NZ_CP116044.1	RefSeq	gene	1649571	1649646	.	+	.	ID=gene-PHA55_RS07960;Name=PHA55_RS07960;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS07960;old_locus_tag=PHA55_07955
NZ_CP116044.1	tRNAscan-SE	tRNA	1649571	1649646	.	+	.	ID=rna-PHA55_RS07960;Parent=gene-PHA55_RS07960;anticodon=(pos:1649604..1649606);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS07960;product=tRNA-Val
NZ_CP116044.1	tRNAscan-SE	exon	1649571	1649646	.	+	.	ID=exon-PHA55_RS07960-1;Parent=rna-PHA55_RS07960;anticodon=(pos:1649604..1649606);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS07960;product=tRNA-Val
NZ_CP116044.1	RefSeq	gene	1649650	1649725	.	+	.	ID=gene-PHA55_RS07965;Name=PHA55_RS07965;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS07965;old_locus_tag=PHA55_07960
NZ_CP116044.1	tRNAscan-SE	tRNA	1649650	1649725	.	+	.	ID=rna-PHA55_RS07965;Parent=gene-PHA55_RS07965;anticodon=(pos:1649683..1649685);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS07965;product=tRNA-Lys
NZ_CP116044.1	tRNAscan-SE	exon	1649650	1649725	.	+	.	ID=exon-PHA55_RS07965-1;Parent=rna-PHA55_RS07965;anticodon=(pos:1649683..1649685);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS07965;product=tRNA-Lys
NZ_CP116044.1	RefSeq	gene	1649872	1649947	.	+	.	ID=gene-PHA55_RS07970;Name=PHA55_RS07970;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS07970;old_locus_tag=PHA55_07965
NZ_CP116044.1	tRNAscan-SE	tRNA	1649872	1649947	.	+	.	ID=rna-PHA55_RS07970;Parent=gene-PHA55_RS07970;anticodon=(pos:1649905..1649907);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS07970;product=tRNA-Lys
NZ_CP116044.1	tRNAscan-SE	exon	1649872	1649947	.	+	.	ID=exon-PHA55_RS07970-1;Parent=rna-PHA55_RS07970;anticodon=(pos:1649905..1649907);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS07970;product=tRNA-Lys
NZ_CP116044.1	RefSeq	gene	1649981	1650056	.	+	.	ID=gene-PHA55_RS07975;Name=PHA55_RS07975;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS07975;old_locus_tag=PHA55_07970
NZ_CP116044.1	tRNAscan-SE	tRNA	1649981	1650056	.	+	.	ID=rna-PHA55_RS07975;Parent=gene-PHA55_RS07975;anticodon=(pos:1650014..1650016);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS07975;product=tRNA-Lys
NZ_CP116044.1	tRNAscan-SE	exon	1649981	1650056	.	+	.	ID=exon-PHA55_RS07975-1;Parent=rna-PHA55_RS07975;anticodon=(pos:1650014..1650016);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS07975;product=tRNA-Lys
NZ_CP116044.1	RefSeq	gene	1650087	1650212	.	+	.	ID=gene-PHA55_RS07980;Name=PHA55_RS07980;gbkey=Gene;gene_biotype=ncRNA;locus_tag=PHA55_RS07980;old_locus_tag=PHA55_07975
NZ_CP116044.1	cmsearch	ncRNA	1650087	1650212	.	+	.	ID=rna-PHA55_RS07980;Parent=gene-PHA55_RS07980;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS07980;product=RtT sRNA
NZ_CP116044.1	cmsearch	exon	1650087	1650212	.	+	.	ID=exon-PHA55_RS07980-1;Parent=rna-PHA55_RS07980;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS07980;product=RtT sRNA
NZ_CP116044.1	RefSeq	gene	1650461	1651504	.	+	.	ID=gene-PHA55_RS07985;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=PHA55_RS07985;old_locus_tag=PHA55_07980
NZ_CP116044.1	Protein Homology	CDS	1650461	1651504	.	+	0	ID=cds-WP_000115295.1;Parent=gene-PHA55_RS07985;Dbxref=Genbank:WP_000115295.1;Name=WP_000115295.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415271.1;locus_tag=PHA55_RS07985;product=quinolinate synthase NadA;protein_id=WP_000115295.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1651542	1652261	.	+	.	ID=gene-PHA55_RS07990;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=PHA55_RS07990;old_locus_tag=PHA55_07985
NZ_CP116044.1	Protein Homology	CDS	1651542	1652261	.	+	0	ID=cds-WP_000345410.1;Parent=gene-PHA55_RS07990;Dbxref=Genbank:WP_000345410.1;Name=WP_000345410.1;gbkey=CDS;gene=pnuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415272.1;locus_tag=PHA55_RS07990;product=nicotinamide riboside transporter PnuC;protein_id=WP_000345410.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1652258	1653199	.	-	.	ID=gene-PHA55_RS07995;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=PHA55_RS07995;old_locus_tag=PHA55_07990
NZ_CP116044.1	Protein Homology	CDS	1652258	1653199	.	-	0	ID=cds-WP_000951292.1;Parent=gene-PHA55_RS07995;Dbxref=Genbank:WP_000951292.1;Name=WP_000951292.1;Ontology_term=GO:0006829,GO:0055085,GO:0005385,GO:0016020;gbkey=CDS;gene=zitB;go_component=membrane|0016020||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transport|0006829||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415273.1;locus_tag=PHA55_RS07995;product=CDF family zinc transporter ZitB;protein_id=WP_000951292.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1653313	1653693	.	-	.	ID=gene-PHA55_RS08000;Name=ybgS;gbkey=Gene;gene=ybgS;gene_biotype=protein_coding;locus_tag=PHA55_RS08000;old_locus_tag=PHA55_07995
NZ_CP116044.1	Protein Homology	CDS	1653313	1653693	.	-	0	ID=cds-WP_000784351.1;Parent=gene-PHA55_RS08000;Dbxref=Genbank:WP_000784351.1;Name=WP_000784351.1;gbkey=CDS;gene=ybgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415274.1;locus_tag=PHA55_RS08000;product=YbgS-like family protein;protein_id=WP_000784351.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1654009	1655061	.	+	.	ID=gene-PHA55_RS08005;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=PHA55_RS08005;old_locus_tag=PHA55_08000
NZ_CP116044.1	Protein Homology	CDS	1654009	1655061	.	+	0	ID=cds-WP_001109196.1;Parent=gene-PHA55_RS08005;Dbxref=Genbank:WP_001109196.1;Name=WP_001109196.1;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=PHA55_RS08005;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_001109196.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1655220	1655972	.	-	.	ID=gene-PHA55_RS08010;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=PHA55_RS08010;old_locus_tag=PHA55_08005
NZ_CP116044.1	Protein Homology	CDS	1655220	1655972	.	-	0	ID=cds-WP_001295305.1;Parent=gene-PHA55_RS08010;Dbxref=Genbank:WP_001295305.1;Name=WP_001295305.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=PHA55_RS08010;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_001295305.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1656174	1657214	.	-	.	ID=gene-PHA55_RS08015;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=PHA55_RS08015;old_locus_tag=PHA55_08010
NZ_CP116044.1	Protein Homology	CDS	1656174	1657214	.	-	0	ID=cds-WP_000931389.1;Parent=gene-PHA55_RS08015;Dbxref=Genbank:WP_000931389.1;Name=WP_000931389.1;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415277.1;locus_tag=PHA55_RS08015;product=galactose-1-epimerase;protein_id=WP_000931389.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1657208	1658356	.	-	.	ID=gene-PHA55_RS08020;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=PHA55_RS08020;old_locus_tag=PHA55_08015
NZ_CP116044.1	Protein Homology	CDS	1657208	1658356	.	-	0	ID=cds-WP_000053415.1;Parent=gene-PHA55_RS08020;Dbxref=Genbank:WP_000053415.1;Name=WP_000053415.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=PHA55_RS08020;product=galactokinase;protein_id=WP_000053415.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1658360	1659406	.	-	.	ID=gene-PHA55_RS08025;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=PHA55_RS08025;old_locus_tag=PHA55_08020
NZ_CP116044.1	Protein Homology	CDS	1658360	1659406	.	-	0	ID=cds-WP_000191531.1;Parent=gene-PHA55_RS08025;Dbxref=Genbank:WP_000191531.1;Name=WP_000191531.1;Ontology_term=GO:0006012,GO:0008108;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308813.1;locus_tag=PHA55_RS08025;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_000191531.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1659416	1660432	.	-	.	ID=gene-PHA55_RS08030;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=PHA55_RS08030;old_locus_tag=PHA55_08025
NZ_CP116044.1	Protein Homology	CDS	1659416	1660432	.	-	0	ID=cds-WP_001265443.1;Parent=gene-PHA55_RS08030;Dbxref=Genbank:WP_001265443.1;Name=WP_001265443.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308814.3;locus_tag=PHA55_RS08030;product=UDP-glucose 4-epimerase GalE;protein_id=WP_001265443.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1660695	1662167	.	-	.	ID=gene-PHA55_RS08035;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=PHA55_RS08035;old_locus_tag=PHA55_08030
NZ_CP116044.1	Protein Homology	CDS	1660695	1662167	.	-	0	ID=cds-WP_000096894.1;Parent=gene-PHA55_RS08035;Dbxref=Genbank:WP_000096894.1;Name=WP_000096894.1;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308815.1;locus_tag=PHA55_RS08035;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=WP_000096894.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1662235	1663023	.	-	.	ID=gene-PHA55_RS08040;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=PHA55_RS08040;old_locus_tag=PHA55_08035
NZ_CP116044.1	Protein Homology	CDS	1662235	1663023	.	-	0	ID=cds-WP_001147439.1;Parent=gene-PHA55_RS08040;Dbxref=Genbank:WP_001147439.1;Name=WP_001147439.1;Ontology_term=GO:0006355,GO:0015689,GO:0003700,GO:0030151;gbkey=CDS;gene=modE;go_function=DNA-binding transcription factor activity|0003700||IEA,molybdenum ion binding|0030151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308816.1;locus_tag=PHA55_RS08040;product=molybdenum-dependent transcriptional regulator;protein_id=WP_001147439.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1663152	1663301	.	+	.	ID=gene-PHA55_RS08045;Name=acrZ;gbkey=Gene;gene=acrZ;gene_biotype=protein_coding;locus_tag=PHA55_RS08045;old_locus_tag=PHA55_08040
NZ_CP116044.1	Protein Homology	CDS	1663152	1663301	.	+	0	ID=cds-WP_000891515.1;Parent=gene-PHA55_RS08045;Dbxref=Genbank:WP_000891515.1;Name=WP_000891515.1;gbkey=CDS;gene=acrZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308817.1;locus_tag=PHA55_RS08045;product=multidrug efflux pump accessory protein AcrZ;protein_id=WP_000891515.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1663468	1664241	.	+	.	ID=gene-PHA55_RS08050;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=PHA55_RS08050;old_locus_tag=PHA55_08045
NZ_CP116044.1	Protein Homology	CDS	1663468	1664241	.	+	0	ID=cds-WP_000101994.1;Parent=gene-PHA55_RS08050;Dbxref=Genbank:WP_000101994.1;Name=WP_000101994.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308818.1;locus_tag=PHA55_RS08050;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_000101994.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1664241	1664930	.	+	.	ID=gene-PHA55_RS08055;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=PHA55_RS08055;old_locus_tag=PHA55_08050
NZ_CP116044.1	Protein Homology	CDS	1664241	1664930	.	+	0	ID=cds-WP_000604032.1;Parent=gene-PHA55_RS08055;Dbxref=Genbank:WP_000604032.1;Name=WP_000604032.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308819.1;locus_tag=PHA55_RS08055;product=molybdate ABC transporter permease subunit;protein_id=WP_000604032.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1664933	1665991	.	+	.	ID=gene-PHA55_RS08060;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=PHA55_RS08060;old_locus_tag=PHA55_08055
NZ_CP116044.1	Protein Homology	CDS	1664933	1665991	.	+	0	ID=cds-WP_000891683.1;Parent=gene-PHA55_RS08060;Dbxref=Genbank:WP_000891683.1;Name=WP_000891683.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308820.1;locus_tag=PHA55_RS08060;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_000891683.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1665992	1666810	.	-	.	ID=gene-PHA55_RS08065;Name=ybhA;gbkey=Gene;gene=ybhA;gene_biotype=protein_coding;locus_tag=PHA55_RS08065;old_locus_tag=PHA55_08060
NZ_CP116044.1	Protein Homology	CDS	1665992	1666810	.	-	0	ID=cds-WP_000213425.1;Parent=gene-PHA55_RS08065;Dbxref=Genbank:WP_000213425.1;Name=WP_000213425.1;gbkey=CDS;gene=ybhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308821.1;locus_tag=PHA55_RS08065;product=bifunctional pyridoxal phosphate/fructose-1%2C6-bisphosphate phosphatase;protein_id=WP_000213425.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1666965	1667960	.	+	.	ID=gene-PHA55_RS08070;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=PHA55_RS08070;old_locus_tag=PHA55_08065
NZ_CP116044.1	Protein Homology	CDS	1666965	1667960	.	+	0	ID=cds-WP_000815435.1;Parent=gene-PHA55_RS08070;Dbxref=Genbank:WP_000815435.1;Name=WP_000815435.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415288.1;locus_tag=PHA55_RS08070;product=6-phosphogluconolactonase;protein_id=WP_000815435.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1668001	1668954	.	-	.	ID=gene-PHA55_RS08075;Name=ybhD;gbkey=Gene;gene=ybhD;gene_biotype=protein_coding;locus_tag=PHA55_RS08075;old_locus_tag=PHA55_08070
NZ_CP116044.1	Protein Homology	CDS	1668001	1668954	.	-	0	ID=cds-WP_000679972.1;Parent=gene-PHA55_RS08075;Dbxref=Genbank:WP_000679972.1;Name=WP_000679972.1;gbkey=CDS;gene=ybhD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308823.3;locus_tag=PHA55_RS08075;product=LysR family transcriptional regulator;protein_id=WP_000679972.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1669138	1670190	.	+	.	ID=gene-PHA55_RS08080;Name=ybhH;gbkey=Gene;gene=ybhH;gene_biotype=protein_coding;locus_tag=PHA55_RS08080;old_locus_tag=PHA55_08075
NZ_CP116044.1	Protein Homology	CDS	1669138	1670190	.	+	0	ID=cds-WP_000723652.1;Parent=gene-PHA55_RS08080;Dbxref=Genbank:WP_000723652.1;Name=WP_000723652.1;gbkey=CDS;gene=ybhH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415290.1;locus_tag=PHA55_RS08080;product=4-oxalomesaconate tautomerase;protein_id=WP_000723652.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1670266	1671699	.	+	.	ID=gene-PHA55_RS08085;Name=ybhI;gbkey=Gene;gene=ybhI;gene_biotype=protein_coding;locus_tag=PHA55_RS08085;old_locus_tag=PHA55_08080
NZ_CP116044.1	Protein Homology	CDS	1670266	1671699	.	+	0	ID=cds-WP_001036475.1;Parent=gene-PHA55_RS08085;Dbxref=Genbank:WP_001036475.1;Name=WP_001036475.1;gbkey=CDS;gene=ybhI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415291.1;locus_tag=PHA55_RS08085;product=anion permease;protein_id=WP_001036475.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1671882	1674143	.	+	.	ID=gene-PHA55_RS08090;Name=ybhJ;gbkey=Gene;gene=ybhJ;gene_biotype=protein_coding;locus_tag=PHA55_RS08090;old_locus_tag=PHA55_08085
NZ_CP116044.1	Protein Homology	CDS	1671882	1674143	.	+	0	ID=cds-WP_000593936.1;Parent=gene-PHA55_RS08090;Dbxref=Genbank:WP_000593936.1;Name=WP_000593936.1;gbkey=CDS;gene=ybhJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415292.2;locus_tag=PHA55_RS08090;product=hydratase;protein_id=WP_000593936.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1674377	1675660	.	-	.	ID=gene-PHA55_RS08095;Name=ybhC;gbkey=Gene;gene=ybhC;gene_biotype=protein_coding;locus_tag=PHA55_RS08095;old_locus_tag=PHA55_08090
NZ_CP116044.1	Protein Homology	CDS	1674377	1675660	.	-	0	ID=cds-WP_001091569.1;Parent=gene-PHA55_RS08095;Dbxref=Genbank:WP_001091569.1;Name=WP_001091569.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;gene=ybhC;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415293.1;locus_tag=PHA55_RS08095;product=putative acyl-CoA thioester hydrolase;protein_id=WP_001091569.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1675812	1676288	.	-	.	ID=gene-PHA55_RS08100;Name=ybhB;gbkey=Gene;gene=ybhB;gene_biotype=protein_coding;locus_tag=PHA55_RS08100;old_locus_tag=PHA55_08095
NZ_CP116044.1	Protein Homology	CDS	1675812	1676288	.	-	0	ID=cds-WP_000767389.1;Parent=gene-PHA55_RS08100;Dbxref=Genbank:WP_000767389.1;Name=WP_000767389.1;gbkey=CDS;gene=ybhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415294.1;locus_tag=PHA55_RS08100;product=kinase inhibitor;protein_id=WP_000767389.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1676347	1677636	.	-	.	ID=gene-PHA55_RS08105;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=PHA55_RS08105;old_locus_tag=PHA55_08100
NZ_CP116044.1	Protein Homology	CDS	1676347	1677636	.	-	0	ID=cds-WP_001389241.1;Parent=gene-PHA55_RS08105;Dbxref=Genbank:WP_001389241.1;Name=WP_001389241.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308879.1;locus_tag=PHA55_RS08105;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_001389241.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1677723	1678763	.	+	.	ID=gene-PHA55_RS08110;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=PHA55_RS08110;old_locus_tag=PHA55_08105
NZ_CP116044.1	Protein Homology	CDS	1677723	1678763	.	+	0	ID=cds-WP_000951213.1;Parent=gene-PHA55_RS08110;Dbxref=Genbank:WP_000951213.1;Name=WP_000951213.1;Ontology_term=GO:0009102,GO:0004076,GO:0051537,GO:0051539,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415296.1;locus_tag=PHA55_RS08110;product=biotin synthase BioB;protein_id=WP_000951213.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1678760	1679914	.	+	.	ID=gene-PHA55_RS08115;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=PHA55_RS08115;old_locus_tag=PHA55_08110
NZ_CP116044.1	Protein Homology	CDS	1678760	1679914	.	+	0	ID=cds-WP_042099273.1;Parent=gene-PHA55_RS08115;Dbxref=Genbank:WP_042099273.1;Name=WP_042099273.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706654.1;locus_tag=PHA55_RS08115;product=8-amino-7-oxononanoate synthase;protein_id=WP_042099273.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1679901	1680656	.	+	.	ID=gene-PHA55_RS08120;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=PHA55_RS08120;old_locus_tag=PHA55_08115
NZ_CP116044.1	Protein Homology	CDS	1679901	1680656	.	+	0	ID=cds-WP_000246805.1;Parent=gene-PHA55_RS08120;Dbxref=Genbank:WP_000246805.1;Name=WP_000246805.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415298.1;locus_tag=PHA55_RS08120;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_000246805.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1680649	1681326	.	+	.	ID=gene-PHA55_RS08125;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=PHA55_RS08125;old_locus_tag=PHA55_08120
NZ_CP116044.1	Protein Homology	CDS	1680649	1681326	.	+	0	ID=cds-WP_000044868.1;Parent=gene-PHA55_RS08125;Dbxref=Genbank:WP_000044868.1;Name=WP_000044868.1;Ontology_term=GO:0009102,GO:0004141;gbkey=CDS;gene=bioD;go_function=dethiobiotin synthase activity|0004141||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706656.2;locus_tag=PHA55_RS08125;product=dethiobiotin synthase;protein_id=WP_000044868.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1681905	1683926	.	+	.	ID=gene-PHA55_RS08130;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=PHA55_RS08130;old_locus_tag=PHA55_08125
NZ_CP116044.1	Protein Homology	CDS	1681905	1683926	.	+	0	ID=cds-WP_000042533.1;Parent=gene-PHA55_RS08130;Dbxref=Genbank:WP_000042533.1;Name=WP_000042533.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=PHA55_RS08130;product=excinuclease ABC subunit UvrB;protein_id=WP_000042533.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	1683963	1684060	.	-	.	ID=gene-PHA55_RS08135;Name=PHA55_RS08135;end_range=1684060,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS08135;old_locus_tag=PHA55_08130;partial=true;pseudo=true;start_range=.,1683963
NZ_CP116044.1	Protein Homology	CDS	1683963	1684060	.	-	0	ID=cds-PHA55_RS08135;Parent=gene-PHA55_RS08135;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1684060,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518748.2;locus_tag=PHA55_RS08135;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1683963;transl_table=11
NZ_CP116044.1	RefSeq	gene	1684118	1685026	.	-	.	ID=gene-PHA55_RS08140;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=PHA55_RS08140;old_locus_tag=PHA55_08135
NZ_CP116044.1	Protein Homology	CDS	1684118	1685026	.	-	0	ID=cds-WP_001295302.1;Parent=gene-PHA55_RS08140;Dbxref=Genbank:WP_001295302.1;Name=WP_001295302.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415301.1;locus_tag=PHA55_RS08140;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WP_001295302.1;transl_table=11
NZ_CP116044.1	cmsearch	riboswitch	1685291	1685435	.	+	.	ID=id-NZ_CP116044.1:1685291..1685435;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
NZ_CP116044.1	RefSeq	gene	1685423	1686412	.	+	.	ID=gene-PHA55_RS08145;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=PHA55_RS08145;old_locus_tag=PHA55_08140
NZ_CP116044.1	Protein Homology	CDS	1685423	1686412	.	+	0	ID=cds-WP_001295301.1;Parent=gene-PHA55_RS08145;Dbxref=Genbank:WP_001295301.1;Name=WP_001295301.1;Ontology_term=GO:0006777,GO:0051539;gbkey=CDS;gene=moaA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308886.1;locus_tag=PHA55_RS08145;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_001295301.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1686434	1686946	.	+	.	ID=gene-PHA55_RS08150;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=PHA55_RS08150;old_locus_tag=PHA55_08145
NZ_CP116044.1	Protein Homology	CDS	1686434	1686946	.	+	0	ID=cds-WP_000084639.1;Parent=gene-PHA55_RS08150;Dbxref=Genbank:WP_000084639.1;Name=WP_000084639.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=PHA55_RS08150;product=molybdenum cofactor biosynthesis protein B;protein_id=WP_000084639.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1686949	1687434	.	+	.	ID=gene-PHA55_RS08155;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=PHA55_RS08155;old_locus_tag=PHA55_08150
NZ_CP116044.1	Protein Homology	CDS	1686949	1687434	.	+	0	ID=cds-WP_044722059.1;Parent=gene-PHA55_RS08155;Dbxref=Genbank:WP_044722059.1;Name=WP_044722059.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaC;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308888.1;locus_tag=PHA55_RS08155;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_044722059.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1687427	1687672	.	+	.	ID=gene-PHA55_RS08160;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=PHA55_RS08160;old_locus_tag=PHA55_08155
NZ_CP116044.1	Protein Homology	CDS	1687427	1687672	.	+	0	ID=cds-WP_000598619.1;Parent=gene-PHA55_RS08160;Dbxref=Genbank:WP_000598619.1;Name=WP_000598619.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415305.1;locus_tag=PHA55_RS08160;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_000598619.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1687674	1688126	.	+	.	ID=gene-PHA55_RS08165;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=PHA55_RS08165;old_locus_tag=PHA55_08160
NZ_CP116044.1	Protein Homology	CDS	1687674	1688126	.	+	0	ID=cds-WP_000852287.1;Parent=gene-PHA55_RS08165;Dbxref=Genbank:WP_000852287.1;Name=WP_000852287.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415306.1;locus_tag=PHA55_RS08165;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_000852287.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1688263	1688967	.	+	.	ID=gene-PHA55_RS08170;Name=ybhL;gbkey=Gene;gene=ybhL;gene_biotype=protein_coding;locus_tag=PHA55_RS08170;old_locus_tag=PHA55_08165
NZ_CP116044.1	Protein Homology	CDS	1688263	1688967	.	+	0	ID=cds-WP_000373624.1;Parent=gene-PHA55_RS08170;Dbxref=Genbank:WP_000373624.1;Name=WP_000373624.1;gbkey=CDS;gene=ybhL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415307.1;locus_tag=PHA55_RS08170;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000373624.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1689113	1689817	.	+	.	ID=gene-PHA55_RS08175;Name=PHA55_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS08175;old_locus_tag=PHA55_08170
NZ_CP116044.1	Protein Homology	CDS	1689113	1689817	.	+	0	ID=cds-WP_001299026.1;Parent=gene-PHA55_RS08175;Dbxref=Genbank:WP_001299026.1;Name=WP_001299026.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013214.2;locus_tag=PHA55_RS08175;product=Bax inhibitor-1 family protein;protein_id=WP_001299026.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1689887	1690600	.	+	.	ID=gene-PHA55_RS08180;Name=PHA55_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS08180;old_locus_tag=PHA55_08175
NZ_CP116044.1	Protein Homology	CDS	1689887	1690600	.	+	0	ID=cds-WP_271287509.1;Parent=gene-PHA55_RS08180;Dbxref=Genbank:WP_271287509.1;Name=WP_271287509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003570877.1;locus_tag=PHA55_RS08180;product=Bax inhibitor-1/YccA family protein;protein_id=WP_271287509.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1690636	1691592	.	-	.	ID=gene-PHA55_RS08185;Name=ybhN;gbkey=Gene;gene=ybhN;gene_biotype=protein_coding;locus_tag=PHA55_RS08185;old_locus_tag=PHA55_08180
NZ_CP116044.1	Protein Homology	CDS	1690636	1691592	.	-	0	ID=cds-WP_000045450.1;Parent=gene-PHA55_RS08185;Dbxref=Genbank:WP_000045450.1;Name=WP_000045450.1;gbkey=CDS;gene=ybhN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415309.1;locus_tag=PHA55_RS08185;product=YbhN family protein;protein_id=WP_000045450.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1691592	1692833	.	-	.	ID=gene-PHA55_RS08190;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=PHA55_RS08190;old_locus_tag=PHA55_08185
NZ_CP116044.1	Protein Homology	CDS	1691592	1692833	.	-	0	ID=cds-WP_000650337.1;Parent=gene-PHA55_RS08190;Dbxref=Genbank:WP_000650337.1;Name=WP_000650337.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=clsB;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308894.1;locus_tag=PHA55_RS08190;product=cardiolipin synthase ClsB;protein_id=WP_000650337.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1692830	1693591	.	-	.	ID=gene-PHA55_RS08195;Name=ybhP;gbkey=Gene;gene=ybhP;gene_biotype=protein_coding;locus_tag=PHA55_RS08195;old_locus_tag=PHA55_08190
NZ_CP116044.1	Protein Homology	CDS	1692830	1693591	.	-	0	ID=cds-WP_001113348.1;Parent=gene-PHA55_RS08195;Dbxref=Genbank:WP_001113348.1;Name=WP_001113348.1;gbkey=CDS;gene=ybhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308895.1;locus_tag=PHA55_RS08195;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_001113348.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1693724	1694134	.	+	.	ID=gene-PHA55_RS08200;Name=ybhQ;gbkey=Gene;gene=ybhQ;gene_biotype=protein_coding;locus_tag=PHA55_RS08200;old_locus_tag=PHA55_08195
NZ_CP116044.1	Protein Homology	CDS	1693724	1694134	.	+	0	ID=cds-WP_000871982.1;Parent=gene-PHA55_RS08200;Dbxref=Genbank:WP_000871982.1;Name=WP_000871982.1;gbkey=CDS;gene=ybhQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308896.1;locus_tag=PHA55_RS08200;product=YbhQ family protein;protein_id=WP_000871982.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1694096	1695202	.	-	.	ID=gene-PHA55_RS08205;Name=ybhR;gbkey=Gene;gene=ybhR;gene_biotype=protein_coding;locus_tag=PHA55_RS08205;old_locus_tag=PHA55_08200
NZ_CP116044.1	Protein Homology	CDS	1694096	1695202	.	-	0	ID=cds-WP_000469031.1;Parent=gene-PHA55_RS08205;Dbxref=Genbank:WP_000469031.1;Name=WP_000469031.1;gbkey=CDS;gene=ybhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308897.1;locus_tag=PHA55_RS08205;product=ABC transporter permease;protein_id=WP_000469031.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1695213	1696346	.	-	.	ID=gene-PHA55_RS08210;Name=ybhS;gbkey=Gene;gene=ybhS;gene_biotype=protein_coding;locus_tag=PHA55_RS08210;old_locus_tag=PHA55_08205
NZ_CP116044.1	Protein Homology	CDS	1695213	1696346	.	-	0	ID=cds-WP_000070131.1;Parent=gene-PHA55_RS08210;Dbxref=Genbank:WP_000070131.1;Name=WP_000070131.1;gbkey=CDS;gene=ybhS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308898.1;locus_tag=PHA55_RS08210;product=ABC transporter permease;protein_id=WP_000070131.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1696339	1698075	.	-	.	ID=gene-PHA55_RS08215;Name=ybhF;gbkey=Gene;gene=ybhF;gene_biotype=protein_coding;locus_tag=PHA55_RS08215;old_locus_tag=PHA55_08210
NZ_CP116044.1	Protein Homology	CDS	1696339	1698075	.	-	0	ID=cds-WP_000996107.1;Parent=gene-PHA55_RS08215;Dbxref=Genbank:WP_000996107.1;Name=WP_000996107.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ybhF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415315.4;locus_tag=PHA55_RS08215;product=ATP-binding cassette domain-containing protein;protein_id=WP_000996107.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1698068	1699063	.	-	.	ID=gene-PHA55_RS08220;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=PHA55_RS08220;old_locus_tag=PHA55_08215
NZ_CP116044.1	Protein Homology	CDS	1698068	1699063	.	-	0	ID=cds-WP_001296990.1;Parent=gene-PHA55_RS08220;Dbxref=Genbank:WP_001296990.1;Name=WP_001296990.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308900.2;locus_tag=PHA55_RS08220;product=secretion protein HlyD;protein_id=WP_001296990.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1699066	1699737	.	-	.	ID=gene-PHA55_RS08225;Name=cecR;gbkey=Gene;gene=cecR;gene_biotype=protein_coding;locus_tag=PHA55_RS08225;old_locus_tag=PHA55_08220
NZ_CP116044.1	Protein Homology	CDS	1699066	1699737	.	-	0	ID=cds-WP_001296991.1;Parent=gene-PHA55_RS08225;Dbxref=Genbank:WP_001296991.1;Name=WP_001296991.1;gbkey=CDS;gene=cecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415317.4;locus_tag=PHA55_RS08225;product=DNA-binding transcriptional regulator CecR;protein_id=WP_001296991.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1699966	1701330	.	+	.	ID=gene-PHA55_RS08230;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=PHA55_RS08230;old_locus_tag=PHA55_08225
NZ_CP116044.1	Protein Homology	CDS	1699966	1701330	.	+	0	ID=cds-WP_000007102.1;Parent=gene-PHA55_RS08230;Dbxref=Genbank:WP_000007102.1;Name=WP_000007102.1;Ontology_term=GO:0003724;gbkey=CDS;gene=rhlE;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415318.1;locus_tag=PHA55_RS08230;product=ATP-dependent RNA helicase RhlE;protein_id=WP_000007102.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1701562	1702044	.	-	.	ID=gene-PHA55_RS08235;Name=ybiA;gbkey=Gene;gene=ybiA;gene_biotype=protein_coding;locus_tag=PHA55_RS08235;old_locus_tag=PHA55_08230
NZ_CP116044.1	Protein Homology	CDS	1701562	1702044	.	-	0	ID=cds-WP_001145128.1;Parent=gene-PHA55_RS08235;Dbxref=Genbank:WP_001145128.1;Name=WP_001145128.1;gbkey=CDS;gene=ybiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415319.1;locus_tag=PHA55_RS08235;product=N-glycosidase YbiA;protein_id=WP_001145128.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1702164	1704314	.	+	.	ID=gene-PHA55_RS08240;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=PHA55_RS08240;old_locus_tag=PHA55_08235
NZ_CP116044.1	Protein Homology	CDS	1702164	1704314	.	+	0	ID=cds-WP_001398823.1;Parent=gene-PHA55_RS08240;Dbxref=Genbank:WP_001398823.1;Name=WP_001398823.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308904.1;locus_tag=PHA55_RS08240;product=ATP-dependent DNA helicase DinG;protein_id=WP_001398823.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1704342	1705304	.	+	.	ID=gene-PHA55_RS08245;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=PHA55_RS08245;old_locus_tag=PHA55_08240
NZ_CP116044.1	Protein Homology	CDS	1704342	1705304	.	+	0	ID=cds-WP_000386540.1;Parent=gene-PHA55_RS08245;Dbxref=Genbank:WP_000386540.1;Name=WP_000386540.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415321.1;locus_tag=PHA55_RS08245;product=DNA-binding protein YbiB;protein_id=WP_000386540.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1705445	1706530	.	+	.	ID=gene-PHA55_RS08250;Name=hcxB;gbkey=Gene;gene=hcxB;gene_biotype=protein_coding;locus_tag=PHA55_RS08250;old_locus_tag=PHA55_08245
NZ_CP116044.1	Protein Homology	CDS	1705445	1706530	.	+	0	ID=cds-WP_000443508.1;Parent=gene-PHA55_RS08250;Dbxref=Genbank:WP_000443508.1;Name=WP_000443508.1;gbkey=CDS;gene=hcxB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415322.1;locus_tag=PHA55_RS08250;product=hydroxycarboxylate dehydrogenase HcXB;protein_id=WP_000443508.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1706597	1706656	.	+	.	ID=gene-PHA55_RS08255;Name=ybiE;gbkey=Gene;gene=ybiE;gene_biotype=protein_coding;locus_tag=PHA55_RS08255;old_locus_tag=PHA55_08250
NZ_CP116044.1	Protein Homology	CDS	1706597	1706656	.	+	0	ID=cds-WP_211180490.1;Parent=gene-PHA55_RS08255;Dbxref=Genbank:WP_211180490.1;Name=WP_211180490.1;gbkey=CDS;gene=ybiE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051178.1;locus_tag=PHA55_RS08255;product=protein YbiE;protein_id=WP_211180490.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1706759	1707019	.	-	.	ID=gene-PHA55_RS08260;Name=ybiJ;gbkey=Gene;gene=ybiJ;gene_biotype=protein_coding;locus_tag=PHA55_RS08260;old_locus_tag=PHA55_08255
NZ_CP116044.1	Protein Homology	CDS	1706759	1707019	.	-	0	ID=cds-WP_000849301.1;Parent=gene-PHA55_RS08260;Dbxref=Genbank:WP_000849301.1;Name=WP_000849301.1;gbkey=CDS;gene=ybiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415323.1;locus_tag=PHA55_RS08260;product=DUF1471 family protein YbiJ;protein_id=WP_000849301.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1707284	1707550	.	-	.	ID=gene-PHA55_RS08265;Name=ybiI;gbkey=Gene;gene=ybiI;gene_biotype=protein_coding;locus_tag=PHA55_RS08265;old_locus_tag=PHA55_08260
NZ_CP116044.1	Protein Homology	CDS	1707284	1707550	.	-	0	ID=cds-WP_000146343.1;Parent=gene-PHA55_RS08265;Dbxref=Genbank:WP_000146343.1;Name=WP_000146343.1;gbkey=CDS;gene=ybiI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415324.1;locus_tag=PHA55_RS08265;product=C4-type zinc finger protein YbiI;protein_id=WP_000146343.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1707624	1708301	.	-	.	ID=gene-PHA55_RS08270;Name=ybiX;gbkey=Gene;gene=ybiX;gene_biotype=protein_coding;locus_tag=PHA55_RS08270;old_locus_tag=PHA55_08265
NZ_CP116044.1	Protein Homology	CDS	1707624	1708301	.	-	0	ID=cds-WP_000990177.1;Parent=gene-PHA55_RS08270;Dbxref=Genbank:WP_000990177.1;Name=WP_000990177.1;gbkey=CDS;gene=ybiX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415325.4;locus_tag=PHA55_RS08270;product=PKHD-type hydroxylase YbiX;protein_id=WP_000990177.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1708343	1710625	.	-	.	ID=gene-PHA55_RS08275;Name=fiu;gbkey=Gene;gene=fiu;gene_biotype=protein_coding;locus_tag=PHA55_RS08275;old_locus_tag=PHA55_08270
NZ_CP116044.1	Protein Homology	CDS	1708343	1710625	.	-	0	ID=cds-WP_000430036.1;Parent=gene-PHA55_RS08275;Dbxref=Genbank:WP_000430036.1;Name=WP_000430036.1;Ontology_term=GO:0015891,GO:0015344;gbkey=CDS;gene=fiu;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308910.1;locus_tag=PHA55_RS08275;product=catecholate siderophore receptor Fiu;protein_id=WP_000430036.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1710890	1711150	.	-	.	ID=gene-PHA55_RS08280;Name=mcbA;gbkey=Gene;gene=mcbA;gene_biotype=protein_coding;locus_tag=PHA55_RS08280;old_locus_tag=PHA55_08275
NZ_CP116044.1	Protein Homology	CDS	1710890	1711150	.	-	0	ID=cds-WP_000710619.1;Parent=gene-PHA55_RS08280;Dbxref=Genbank:WP_000710619.1;Name=WP_000710619.1;gbkey=CDS;gene=mcbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415327.2;locus_tag=PHA55_RS08280;product=DUF1471 family periplasmic protein McbA;protein_id=WP_000710619.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1711426	1712352	.	+	.	ID=gene-PHA55_RS08285;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=PHA55_RS08285;old_locus_tag=PHA55_08280
NZ_CP116044.1	Protein Homology	CDS	1711426	1712352	.	+	0	ID=cds-WP_001275941.1;Parent=gene-PHA55_RS08285;Dbxref=Genbank:WP_001275941.1;Name=WP_001275941.1;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415328.4;locus_tag=PHA55_RS08285;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=WP_001275941.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1712349	1714574	.	-	.	ID=gene-PHA55_RS08290;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=protein_coding;locus_tag=PHA55_RS08290;old_locus_tag=PHA55_08285
NZ_CP116044.1	Protein Homology	CDS	1712349	1714574	.	-	0	ID=cds-WP_001267229.1;Parent=gene-PHA55_RS08290;Dbxref=Genbank:WP_001267229.1;Name=WP_001267229.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ybiO;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415329.4;locus_tag=PHA55_RS08290;product=mechanosensitive channel protein;protein_id=WP_001267229.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1714691	1715413	.	-	.	ID=gene-PHA55_RS08295;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=PHA55_RS08295;old_locus_tag=PHA55_08290
NZ_CP116044.1	Protein Homology	CDS	1714691	1715413	.	-	0	ID=cds-WP_000569080.1;Parent=gene-PHA55_RS08295;Dbxref=Genbank:WP_000569080.1;Name=WP_000569080.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=PHA55_RS08295;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WP_000569080.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1715410	1716069	.	-	.	ID=gene-PHA55_RS08300;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=PHA55_RS08300;old_locus_tag=PHA55_08295
NZ_CP116044.1	Protein Homology	CDS	1715410	1716069	.	-	0	ID=cds-WP_001159071.1;Parent=gene-PHA55_RS08300;Dbxref=Genbank:WP_001159071.1;Name=WP_001159071.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=PHA55_RS08300;product=glutamine ABC transporter permease GlnP;protein_id=WP_001159071.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1716208	1716954	.	-	.	ID=gene-PHA55_RS08305;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=PHA55_RS08305;old_locus_tag=PHA55_08300
NZ_CP116044.1	Protein Homology	CDS	1716208	1716954	.	-	0	ID=cds-WP_000843866.1;Parent=gene-PHA55_RS08305;Dbxref=Genbank:WP_000843866.1;Name=WP_000843866.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=glnH;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=PHA55_RS08305;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=WP_000843866.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1717358	1717861	.	-	.	ID=gene-PHA55_RS08310;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=PHA55_RS08310;old_locus_tag=PHA55_08305
NZ_CP116044.1	Protein Homology	CDS	1717358	1717861	.	-	0	ID=cds-WP_000100800.1;Parent=gene-PHA55_RS08310;Dbxref=Genbank:WP_000100800.1;Name=WP_000100800.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001730644.1;locus_tag=PHA55_RS08310;product=DNA starvation/stationary phase protection protein Dps;protein_id=WP_000100800.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1718160	1719047	.	-	.	ID=gene-PHA55_RS08315;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=PHA55_RS08315;old_locus_tag=PHA55_08310
NZ_CP116044.1	Protein Homology	CDS	1718160	1719047	.	-	0	ID=cds-WP_001119538.1;Parent=gene-PHA55_RS08315;Dbxref=Genbank:WP_001119538.1;Name=WP_001119538.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308918.1;locus_tag=PHA55_RS08315;product=threonine/homoserine exporter RhtA;protein_id=WP_001119538.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1719282	1719347	.	+	.	ID=gene-PHA55_RS08320;Name=PHA55_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS08320;old_locus_tag=PHA55_08315
NZ_CP116044.1	Protein Homology	CDS	1719282	1719347	.	+	0	ID=cds-WP_120795379.1;Parent=gene-PHA55_RS08320;Dbxref=Genbank:WP_120795379.1;Name=WP_120795379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518760.1;locus_tag=PHA55_RS08320;product=protein YliM;protein_id=WP_120795379.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1719400	1719915	.	+	.	ID=gene-PHA55_RS08325;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=PHA55_RS08325;old_locus_tag=PHA55_08320
NZ_CP116044.1	Protein Homology	CDS	1719400	1719915	.	+	0	ID=cds-WP_001295296.1;Parent=gene-PHA55_RS08325;Dbxref=Genbank:WP_001295296.1;Name=WP_001295296.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308919.1;locus_tag=PHA55_RS08325;product=outer membrane protein OmpX;protein_id=WP_001295296.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1719964	1721547	.	-	.	ID=gene-PHA55_RS08330;Name=opgE;gbkey=Gene;gene=opgE;gene_biotype=protein_coding;locus_tag=PHA55_RS08330;old_locus_tag=PHA55_08325
NZ_CP116044.1	Protein Homology	CDS	1719964	1721547	.	-	0	ID=cds-WP_001054679.1;Parent=gene-PHA55_RS08330;Dbxref=Genbank:WP_001054679.1;Name=WP_001054679.1;gbkey=CDS;gene=opgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415336.1;locus_tag=PHA55_RS08330;product=phosphoethanolamine transferase;protein_id=WP_001054679.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1721819	1721947	.	-	.	ID=gene-PHA55_RS08335;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=PHA55_RS08335;old_locus_tag=PHA55_08330
NZ_CP116044.1	Protein Homology	CDS	1721819	1721947	.	-	0	ID=cds-WP_001001761.1;Parent=gene-PHA55_RS08335;Dbxref=Genbank:WP_001001761.1;Name=WP_001001761.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439233.1;locus_tag=PHA55_RS08335;product=manganase accumulation protein MntS;protein_id=WP_001001761.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1722133	1722600	.	+	.	ID=gene-PHA55_RS08340;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=PHA55_RS08340;old_locus_tag=PHA55_08335
NZ_CP116044.1	Protein Homology	CDS	1722133	1722600	.	+	0	ID=cds-WP_000091016.1;Parent=gene-PHA55_RS08340;Dbxref=Genbank:WP_000091016.1;Name=WP_000091016.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415338.1;locus_tag=PHA55_RS08340;product=manganese-binding transcriptional regulator MntR;protein_id=WP_000091016.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1722597	1723715	.	+	.	ID=gene-PHA55_RS08345;Name=ybiR;gbkey=Gene;gene=ybiR;gene_biotype=protein_coding;locus_tag=PHA55_RS08345;old_locus_tag=PHA55_08340
NZ_CP116044.1	Protein Homology	CDS	1722597	1723715	.	+	0	ID=cds-WP_032296745.1;Parent=gene-PHA55_RS08345;Dbxref=Genbank:WP_032296745.1;Name=WP_032296745.1;gbkey=CDS;gene=ybiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415339.1;locus_tag=PHA55_RS08345;product=anion transporter;protein_id=WP_032296745.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1723774	1724694	.	-	.	ID=gene-PHA55_RS08350;Name=ldtB;gbkey=Gene;gene=ldtB;gene_biotype=protein_coding;locus_tag=PHA55_RS08350;old_locus_tag=PHA55_08345
NZ_CP116044.1	Protein Homology	CDS	1723774	1724694	.	-	0	ID=cds-WP_001056384.1;Parent=gene-PHA55_RS08350;Dbxref=Genbank:WP_001056384.1;Name=WP_001056384.1;gbkey=CDS;gene=ldtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308923.1;locus_tag=PHA55_RS08350;product=L%2CD-transpeptidase;protein_id=WP_001056384.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1724913	1726505	.	+	.	ID=gene-PHA55_RS08355;Name=ybiT;gbkey=Gene;gene=ybiT;gene_biotype=protein_coding;locus_tag=PHA55_RS08355;old_locus_tag=PHA55_08350
NZ_CP116044.1	Protein Homology	CDS	1724913	1726505	.	+	0	ID=cds-WP_000961458.1;Parent=gene-PHA55_RS08355;Dbxref=Genbank:WP_000961458.1;Name=WP_000961458.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ybiT;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308924.1;locus_tag=PHA55_RS08355;product=ABC-F family ATPase;protein_id=WP_000961458.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1726784	1727764	.	+	.	ID=gene-PHA55_RS08360;Name=PHA55_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS08360;old_locus_tag=PHA55_08355
NZ_CP116044.1	Protein Homology	CDS	1726784	1727764	.	+	0	ID=cds-WP_000399648.1-8;Parent=gene-PHA55_RS08360;Dbxref=Genbank:WP_000399648.1;Name=WP_000399648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904434.1;locus_tag=PHA55_RS08360;product=IS110-like element IS621 family transposase;protein_id=WP_000399648.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1728025	1729290	.	-	.	ID=gene-PHA55_RS08365;Name=ybiU;gbkey=Gene;gene=ybiU;gene_biotype=protein_coding;locus_tag=PHA55_RS08365;old_locus_tag=PHA55_08360
NZ_CP116044.1	Protein Homology	CDS	1728025	1729290	.	-	0	ID=cds-WP_000168797.1;Parent=gene-PHA55_RS08365;Dbxref=Genbank:WP_000168797.1;Name=WP_000168797.1;gbkey=CDS;gene=ybiU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415342.1;locus_tag=PHA55_RS08365;product=DUF1479 domain-containing protein;protein_id=WP_000168797.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1729442	1730257	.	-	.	ID=gene-PHA55_RS08370;Name=ybiV;gbkey=Gene;gene=ybiV;gene_biotype=protein_coding;locus_tag=PHA55_RS08370;old_locus_tag=PHA55_08365
NZ_CP116044.1	Protein Homology	CDS	1729442	1730257	.	-	0	ID=cds-WP_000114244.1;Parent=gene-PHA55_RS08370;Dbxref=Genbank:WP_000114244.1;Name=WP_000114244.1;gbkey=CDS;gene=ybiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308926.1;locus_tag=PHA55_RS08370;product=sugar-phosphatase YbiV;protein_id=WP_000114244.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1730403	1732835	.	-	.	ID=gene-PHA55_RS08375;Name=ybiW;gbkey=Gene;gene=ybiW;gene_biotype=protein_coding;locus_tag=PHA55_RS08375;old_locus_tag=PHA55_08370
NZ_CP116044.1	Protein Homology	CDS	1730403	1732835	.	-	0	ID=cds-WP_000209359.1;Parent=gene-PHA55_RS08375;Dbxref=Genbank:WP_000209359.1;Name=WP_000209359.1;gbkey=CDS;gene=ybiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415344.1;locus_tag=PHA55_RS08375;product=glycyl radical protein;protein_id=WP_000209359.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1732841	1733740	.	-	.	ID=gene-PHA55_RS08380;Name=ybiY;gbkey=Gene;gene=ybiY;gene_biotype=protein_coding;locus_tag=PHA55_RS08380;old_locus_tag=PHA55_08375
NZ_CP116044.1	Protein Homology	CDS	1732841	1733740	.	-	0	ID=cds-WP_001307076.1;Parent=gene-PHA55_RS08380;Dbxref=Genbank:WP_001307076.1;Name=WP_001307076.1;gbkey=CDS;gene=ybiY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415345.2;locus_tag=PHA55_RS08380;product=glycyl-radical enzyme activating protein;protein_id=WP_001307076.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1733871	1734533	.	+	.	ID=gene-PHA55_RS08385;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=PHA55_RS08385;old_locus_tag=PHA55_08380
NZ_CP116044.1	Protein Homology	CDS	1733871	1734533	.	+	0	ID=cds-WP_001351540.1;Parent=gene-PHA55_RS08385;Dbxref=Genbank:WP_001351540.1;Name=WP_001351540.1;Ontology_term=GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308930.3;locus_tag=PHA55_RS08385;product=fructose-6-phosphate aldolase;protein_id=WP_001351540.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1734621	1735370	.	-	.	ID=gene-PHA55_RS08390;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=PHA55_RS08390;old_locus_tag=PHA55_08385
NZ_CP116044.1	Protein Homology	CDS	1734621	1735370	.	-	0	ID=cds-WP_000829244.1;Parent=gene-PHA55_RS08390;Dbxref=Genbank:WP_000829244.1;Name=WP_000829244.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706703.1;locus_tag=PHA55_RS08390;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_000829244.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1735370	1736605	.	-	.	ID=gene-PHA55_RS08395;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=PHA55_RS08395;old_locus_tag=PHA55_08390
NZ_CP116044.1	Protein Homology	CDS	1735370	1736605	.	-	0	ID=cds-WP_000397334.1;Parent=gene-PHA55_RS08395;Dbxref=Genbank:WP_000397334.1;Name=WP_000397334.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415348.1;locus_tag=PHA55_RS08395;product=molybdopterin molybdotransferase MoeA;protein_id=WP_000397334.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1736809	1737774	.	+	.	ID=gene-PHA55_RS08400;Name=iaaA;gbkey=Gene;gene=iaaA;gene_biotype=protein_coding;locus_tag=PHA55_RS08400;old_locus_tag=PHA55_08395
NZ_CP116044.1	Protein Homology	CDS	1736809	1737774	.	+	0	ID=cds-WP_000513775.1;Parent=gene-PHA55_RS08400;Dbxref=Genbank:WP_000513775.1;Name=WP_000513775.1;gbkey=CDS;gene=iaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415349.1;locus_tag=PHA55_RS08400;product=beta-aspartyl-peptidase;protein_id=WP_000513775.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1737761	1739632	.	+	.	ID=gene-PHA55_RS08405;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=PHA55_RS08405;old_locus_tag=PHA55_08400
NZ_CP116044.1	Protein Homology	CDS	1737761	1739632	.	+	0	ID=cds-WP_001296993.1;Parent=gene-PHA55_RS08405;Dbxref=Genbank:WP_001296993.1;Name=WP_001296993.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=gsiA;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415350.2;locus_tag=PHA55_RS08405;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=WP_001296993.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1739652	1741190	.	+	.	ID=gene-PHA55_RS08410;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=PHA55_RS08410;old_locus_tag=PHA55_08405
NZ_CP116044.1	Protein Homology	CDS	1739652	1741190	.	+	0	ID=cds-WP_000090130.1;Parent=gene-PHA55_RS08410;Dbxref=Genbank:WP_000090130.1;Name=WP_000090130.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706707.2;locus_tag=PHA55_RS08410;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=WP_000090130.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1741208	1742128	.	+	.	ID=gene-PHA55_RS08415;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=PHA55_RS08415;old_locus_tag=PHA55_08410
NZ_CP116044.1	Protein Homology	CDS	1741208	1742128	.	+	0	ID=cds-WP_000936043.1;Parent=gene-PHA55_RS08415;Dbxref=Genbank:WP_000936043.1;Name=WP_000936043.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415352.1;locus_tag=PHA55_RS08415;product=glutathione ABC transporter permease GsiC;protein_id=WP_000936043.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1742131	1743042	.	+	.	ID=gene-PHA55_RS08420;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=PHA55_RS08420;old_locus_tag=PHA55_08415
NZ_CP116044.1	Protein Homology	CDS	1742131	1743042	.	+	0	ID=cds-WP_223717666.1;Parent=gene-PHA55_RS08420;Dbxref=Genbank:WP_223717666.1;Name=WP_223717666.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308938.1;locus_tag=PHA55_RS08420;product=glutathione ABC transporter permease GsiD;protein_id=WP_223717666.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1743220	1745568	.	+	.	ID=gene-PHA55_RS08425;Name=pdeI;gbkey=Gene;gene=pdeI;gene_biotype=protein_coding;locus_tag=PHA55_RS08425;old_locus_tag=PHA55_08420
NZ_CP116044.1	Protein Homology	CDS	1743220	1745568	.	+	0	ID=cds-WP_001307078.1;Parent=gene-PHA55_RS08425;Dbxref=Genbank:WP_001307078.1;Name=WP_001307078.1;gbkey=CDS;gene=pdeI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415354.1;locus_tag=PHA55_RS08425;product=EAL domain-containing protein;protein_id=WP_001307078.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1745576	1746904	.	+	.	ID=gene-PHA55_RS08430;Name=dgcI;gbkey=Gene;gene=dgcI;gene_biotype=protein_coding;locus_tag=PHA55_RS08430;old_locus_tag=PHA55_08425
NZ_CP116044.1	Protein Homology	CDS	1745576	1746904	.	+	0	ID=cds-WP_000086904.1;Parent=gene-PHA55_RS08430;Dbxref=Genbank:WP_000086904.1;Name=WP_000086904.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;gene=dgcI;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415355.1;locus_tag=PHA55_RS08430;product=GGDEF domain-containing protein;protein_id=WP_000086904.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1746951	1748276	.	-	.	ID=gene-PHA55_RS08435;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=PHA55_RS08435;old_locus_tag=PHA55_08430
NZ_CP116044.1	Protein Homology	CDS	1746951	1748276	.	-	0	ID=cds-WP_000049367.1;Parent=gene-PHA55_RS08435;Dbxref=Genbank:WP_000049367.1;Name=WP_000049367.1;Ontology_term=GO:0018339,GO:0008172,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=rimO;go_function=S-methyltransferase activity|0008172||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308942.1;locus_tag=PHA55_RS08435;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_000049367.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1748489	1748872	.	+	.	ID=gene-PHA55_RS08440;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;locus_tag=PHA55_RS08440;old_locus_tag=PHA55_08435
NZ_CP116044.1	Protein Homology	CDS	1748489	1748872	.	+	0	ID=cds-WP_000497137.1;Parent=gene-PHA55_RS08440;Dbxref=Genbank:WP_000497137.1;Name=WP_000497137.1;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308943.1;locus_tag=PHA55_RS08440;product=biofilm formation regulator BssR;protein_id=WP_000497137.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1748983	1750098	.	+	.	ID=gene-PHA55_RS08445;Name=yliI;gbkey=Gene;gene=yliI;gene_biotype=protein_coding;locus_tag=PHA55_RS08445;old_locus_tag=PHA55_08440
NZ_CP116044.1	Protein Homology	CDS	1748983	1750098	.	+	0	ID=cds-WP_000555054.1;Parent=gene-PHA55_RS08445;Dbxref=Genbank:WP_000555054.1;Name=WP_000555054.1;gbkey=CDS;gene=yliI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415358.1;locus_tag=PHA55_RS08445;product=aldose sugar dehydrogenase YliI;protein_id=WP_000555054.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1750095	1750721	.	-	.	ID=gene-PHA55_RS08450;Name=gstB;gbkey=Gene;gene=gstB;gene_biotype=protein_coding;locus_tag=PHA55_RS08450;old_locus_tag=PHA55_08445
NZ_CP116044.1	Protein Homology	CDS	1750095	1750721	.	-	0	ID=cds-WP_001295292.1;Parent=gene-PHA55_RS08450;Dbxref=Genbank:WP_001295292.1;Name=WP_001295292.1;gbkey=CDS;gene=gstB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308945.2;locus_tag=PHA55_RS08450;product=glutathione S-transferase GstB;protein_id=WP_001295292.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1750968	1752170	.	+	.	ID=gene-PHA55_RS08455;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=PHA55_RS08455;old_locus_tag=PHA55_08450
NZ_CP116044.1	Protein Homology	CDS	1750968	1752170	.	+	0	ID=cds-WP_000195961.1;Parent=gene-PHA55_RS08455;Dbxref=Genbank:WP_000195961.1;Name=WP_000195961.1;gbkey=CDS;gene=dacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308946.1;locus_tag=PHA55_RS08455;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_000195961.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1752217	1752975	.	-	.	ID=gene-PHA55_RS08460;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=PHA55_RS08460;old_locus_tag=PHA55_08455
NZ_CP116044.1	Protein Homology	CDS	1752217	1752975	.	-	0	ID=cds-WP_000450121.1;Parent=gene-PHA55_RS08460;Dbxref=Genbank:WP_000450121.1;Name=WP_000450121.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308947.1;locus_tag=PHA55_RS08460;product=DNA-binding transcriptional repressor DeoR;protein_id=WP_000450121.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1753033	1753629	.	-	.	ID=gene-PHA55_RS08465;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=PHA55_RS08465;old_locus_tag=PHA55_08460
NZ_CP116044.1	Protein Homology	CDS	1753033	1753629	.	-	0	ID=cds-WP_000892317.1;Parent=gene-PHA55_RS08465;Dbxref=Genbank:WP_000892317.1;Name=WP_000892317.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308948.1;locus_tag=PHA55_RS08465;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_000892317.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1753914	1755146	.	+	.	ID=gene-PHA55_RS08470;Name=mdfA;gbkey=Gene;gene=mdfA;gene_biotype=protein_coding;locus_tag=PHA55_RS08470;old_locus_tag=PHA55_08465
NZ_CP116044.1	Protein Homology	CDS	1753914	1755146	.	+	0	ID=cds-WP_001180076.1;Parent=gene-PHA55_RS08470;Dbxref=Genbank:WP_001180076.1;Name=WP_001180076.1;gbkey=CDS;gene=mdfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308949.1;locus_tag=PHA55_RS08470;product=multidrug efflux MFS transporter MdfA;protein_id=WP_001180076.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1755187	1755471	.	-	.	ID=gene-PHA55_RS08475;Name=ybjH;gbkey=Gene;gene=ybjH;gene_biotype=protein_coding;locus_tag=PHA55_RS08475;old_locus_tag=PHA55_08470
NZ_CP116044.1	Protein Homology	CDS	1755187	1755471	.	-	0	ID=cds-WP_000480892.1;Parent=gene-PHA55_RS08475;Dbxref=Genbank:WP_000480892.1;Name=WP_000480892.1;gbkey=CDS;gene=ybjH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415364.1;locus_tag=PHA55_RS08475;product=protein YbjH;protein_id=WP_000480892.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1755557	1756372	.	-	.	ID=gene-PHA55_RS08480;Name=ybjI;gbkey=Gene;gene=ybjI;gene_biotype=protein_coding;locus_tag=PHA55_RS08480;old_locus_tag=PHA55_08475
NZ_CP116044.1	Protein Homology	CDS	1755557	1756372	.	-	0	ID=cds-WP_001297001.1;Parent=gene-PHA55_RS08480;Dbxref=Genbank:WP_001297001.1;Name=WP_001297001.1;gbkey=CDS;gene=ybjI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308951.2;locus_tag=PHA55_RS08480;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase;protein_id=WP_001297001.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1756372	1757580	.	-	.	ID=gene-PHA55_RS08485;Name=ybjJ;gbkey=Gene;gene=ybjJ;gene_biotype=protein_coding;locus_tag=PHA55_RS08485;old_locus_tag=PHA55_08480
NZ_CP116044.1	Protein Homology	CDS	1756372	1757580	.	-	0	ID=cds-WP_000217869.1;Parent=gene-PHA55_RS08485;Dbxref=Genbank:WP_000217869.1;Name=WP_000217869.1;gbkey=CDS;gene=ybjJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415366.1;locus_tag=PHA55_RS08485;product=MFS transporter;protein_id=WP_000217869.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1757664	1758200	.	+	.	ID=gene-PHA55_RS08490;Name=rcdA;gbkey=Gene;gene=rcdA;gene_biotype=protein_coding;locus_tag=PHA55_RS08490;old_locus_tag=PHA55_08485
NZ_CP116044.1	Protein Homology	CDS	1757664	1758200	.	+	0	ID=cds-WP_001297003.1;Parent=gene-PHA55_RS08490;Dbxref=Genbank:WP_001297003.1;Name=WP_001297003.1;gbkey=CDS;gene=rcdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308953.1;locus_tag=PHA55_RS08490;product=DNA-binding transcriptional regulator RcdA;protein_id=WP_001297003.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1758375	1760060	.	-	.	ID=gene-PHA55_RS08495;Name=ybjL;gbkey=Gene;gene=ybjL;gene_biotype=protein_coding;locus_tag=PHA55_RS08495;old_locus_tag=PHA55_08490
NZ_CP116044.1	Protein Homology	CDS	1758375	1760060	.	-	0	ID=cds-WP_001024876.1;Parent=gene-PHA55_RS08495;Dbxref=Genbank:WP_001024876.1;Name=WP_001024876.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;gene=ybjL;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024888.1;locus_tag=PHA55_RS08495;product=aspartate:alanine antiporter;protein_id=WP_001024876.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1760330	1760707	.	+	.	ID=gene-PHA55_RS08500;Name=ybjM;gbkey=Gene;gene=ybjM;gene_biotype=protein_coding;locus_tag=PHA55_RS08500;old_locus_tag=PHA55_08495
NZ_CP116044.1	Protein Homology	CDS	1760330	1760707	.	+	0	ID=cds-WP_000681108.1;Parent=gene-PHA55_RS08500;Dbxref=Genbank:WP_000681108.1;Name=WP_000681108.1;gbkey=CDS;gene=ybjM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308955.1;locus_tag=PHA55_RS08500;product=inner membrane protein YbjM;protein_id=WP_000681108.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1760737	1760994	.	-	.	ID=gene-PHA55_RS08505;Name=grxA;gbkey=Gene;gene=grxA;gene_biotype=protein_coding;locus_tag=PHA55_RS08505;old_locus_tag=PHA55_08500
NZ_CP116044.1	Protein Homology	CDS	1760737	1760994	.	-	0	ID=cds-WP_001195240.1;Parent=gene-PHA55_RS08505;Dbxref=Genbank:WP_001195240.1;Name=WP_001195240.1;gbkey=CDS;gene=grxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415370.1;locus_tag=PHA55_RS08505;product=glutaredoxin 1;protein_id=WP_001195240.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1761154	1761441	.	+	.	ID=gene-PHA55_RS08510;Name=ybjC;gbkey=Gene;gene=ybjC;gene_biotype=protein_coding;locus_tag=PHA55_RS08510;old_locus_tag=PHA55_08505
NZ_CP116044.1	Protein Homology	CDS	1761154	1761441	.	+	0	ID=cds-WP_001201560.1;Parent=gene-PHA55_RS08510;Dbxref=Genbank:WP_001201560.1;Name=WP_001201560.1;gbkey=CDS;gene=ybjC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415371.1;locus_tag=PHA55_RS08510;product=DUF1418 family protein;protein_id=WP_001201560.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1761425	1762147	.	+	.	ID=gene-PHA55_RS08515;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=PHA55_RS08515;old_locus_tag=PHA55_08510
NZ_CP116044.1	Protein Homology	CDS	1761425	1762147	.	+	0	ID=cds-WP_000189120.1;Parent=gene-PHA55_RS08515;Dbxref=Genbank:WP_000189120.1;Name=WP_000189120.1;gbkey=CDS;gene=nfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415372.1;locus_tag=PHA55_RS08515;product=nitroreductase NfsA;protein_id=WP_000189120.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1762208	1763110	.	+	.	ID=gene-PHA55_RS08520;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=PHA55_RS08520;old_locus_tag=PHA55_08515
NZ_CP116044.1	Protein Homology	CDS	1762208	1763110	.	+	0	ID=cds-WP_000684321.1;Parent=gene-PHA55_RS08520;Dbxref=Genbank:WP_000684321.1;Name=WP_000684321.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308959.1;locus_tag=PHA55_RS08520;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WP_000684321.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1763198	1763674	.	+	.	ID=gene-PHA55_RS08525;Name=ybjN;gbkey=Gene;gene=ybjN;gene_biotype=protein_coding;locus_tag=PHA55_RS08525;old_locus_tag=PHA55_08520
NZ_CP116044.1	Protein Homology	CDS	1763198	1763674	.	+	0	ID=cds-WP_000203025.1;Parent=gene-PHA55_RS08525;Dbxref=Genbank:WP_000203025.1;Name=WP_000203025.1;gbkey=CDS;gene=ybjN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308960.1;locus_tag=PHA55_RS08525;product=YbjN domain-containing protein;protein_id=WP_000203025.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1764026	1765138	.	+	.	ID=gene-PHA55_RS08530;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=PHA55_RS08530;old_locus_tag=PHA55_08525
NZ_CP116044.1	Protein Homology	CDS	1764026	1765138	.	+	0	ID=cds-WP_000126072.1;Parent=gene-PHA55_RS08530;Dbxref=Genbank:WP_000126072.1;Name=WP_000126072.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potF;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415375.1;locus_tag=PHA55_RS08530;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=WP_000126072.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1765233	1766366	.	+	.	ID=gene-PHA55_RS08535;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=PHA55_RS08535;old_locus_tag=PHA55_08530
NZ_CP116044.1	Protein Homology	CDS	1765233	1766366	.	+	0	ID=cds-WP_000995994.1;Parent=gene-PHA55_RS08535;Dbxref=Genbank:WP_000995994.1;Name=WP_000995994.1;Ontology_term=GO:0015846,GO:0055085,GO:0005524,GO:0015417,GO:0022857,GO:0043190;gbkey=CDS;gene=potG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996010.1;locus_tag=PHA55_RS08535;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=WP_000995994.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1766376	1767329	.	+	.	ID=gene-PHA55_RS08540;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=PHA55_RS08540;old_locus_tag=PHA55_08535
NZ_CP116044.1	Protein Homology	CDS	1766376	1767329	.	+	0	ID=cds-WP_001093858.1;Parent=gene-PHA55_RS08540;Dbxref=Genbank:WP_001093858.1;Name=WP_001093858.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potH;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706736.1;locus_tag=PHA55_RS08540;product=putrescine ABC transporter permease PotH;protein_id=WP_001093858.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1767326	1768171	.	+	.	ID=gene-PHA55_RS08545;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=PHA55_RS08545;old_locus_tag=PHA55_08540
NZ_CP116044.1	Protein Homology	CDS	1767326	1768171	.	+	0	ID=cds-WP_001061657.1;Parent=gene-PHA55_RS08545;Dbxref=Genbank:WP_001061657.1;Name=WP_001061657.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potI;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415378.1;locus_tag=PHA55_RS08545;product=putrescine ABC transporter permease PotI;protein_id=WP_001061657.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1768231	1768719	.	+	.	ID=gene-PHA55_RS08550;Name=ybjO;gbkey=Gene;gene=ybjO;gene_biotype=protein_coding;locus_tag=PHA55_RS08550;old_locus_tag=PHA55_08545
NZ_CP116044.1	Protein Homology	CDS	1768231	1768719	.	+	0	ID=cds-WP_000389260.1;Parent=gene-PHA55_RS08550;Dbxref=Genbank:WP_000389260.1;Name=WP_000389260.1;gbkey=CDS;gene=ybjO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308965.1;locus_tag=PHA55_RS08550;product=YbjO family protein;protein_id=WP_000389260.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1768760	1769887	.	+	.	ID=gene-PHA55_RS08555;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=PHA55_RS08555;old_locus_tag=PHA55_08550
NZ_CP116044.1	Protein Homology	CDS	1768760	1769887	.	+	0	ID=cds-WP_271287510.1;Parent=gene-PHA55_RS08555;Dbxref=Genbank:WP_271287510.1;Name=WP_271287510.1;Ontology_term=GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706739.1;locus_tag=PHA55_RS08555;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_271287510.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1770062	1770793	.	-	.	ID=gene-PHA55_RS08560;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=PHA55_RS08560;old_locus_tag=PHA55_08555
NZ_CP116044.1	Protein Homology	CDS	1770062	1770793	.	-	0	ID=cds-WP_001295905.1;Parent=gene-PHA55_RS08560;Dbxref=Genbank:WP_001295905.1;Name=WP_001295905.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415381.1;locus_tag=PHA55_RS08560;product=ABC transporter substrate-binding protein ArtJ;protein_id=WP_001295905.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1771085	1771753	.	-	.	ID=gene-PHA55_RS08565;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=PHA55_RS08565;old_locus_tag=PHA55_08560
NZ_CP116044.1	Protein Homology	CDS	1771085	1771753	.	-	0	ID=cds-WP_000464491.1;Parent=gene-PHA55_RS08565;Dbxref=Genbank:WP_000464491.1;Name=WP_000464491.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308971.1;locus_tag=PHA55_RS08565;product=arginine ABC transporter permease ArtM;protein_id=WP_000464491.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1771753	1772469	.	-	.	ID=gene-PHA55_RS08570;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=PHA55_RS08570;old_locus_tag=PHA55_08565
NZ_CP116044.1	Protein Homology	CDS	1771753	1772469	.	-	0	ID=cds-WP_001001691.1;Parent=gene-PHA55_RS08570;Dbxref=Genbank:WP_001001691.1;Name=WP_001001691.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415383.1;locus_tag=PHA55_RS08570;product=arginine ABC transporter permease ArtQ;protein_id=WP_001001691.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1772476	1773207	.	-	.	ID=gene-PHA55_RS08575;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=PHA55_RS08575;old_locus_tag=PHA55_08570
NZ_CP116044.1	Protein Homology	CDS	1772476	1773207	.	-	0	ID=cds-WP_000756569.1;Parent=gene-PHA55_RS08575;Dbxref=Genbank:WP_000756569.1;Name=WP_000756569.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415384.1;locus_tag=PHA55_RS08575;product=arginine ABC transporter substrate-binding protein;protein_id=WP_000756569.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1773225	1773953	.	-	.	ID=gene-PHA55_RS08580;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=PHA55_RS08580;old_locus_tag=PHA55_08575
NZ_CP116044.1	Protein Homology	CDS	1773225	1773953	.	-	0	ID=cds-WP_000027205.1;Parent=gene-PHA55_RS08580;Dbxref=Genbank:WP_000027205.1;Name=WP_000027205.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=artP;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=PHA55_RS08580;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_000027205.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1774171	1774686	.	-	.	ID=gene-PHA55_RS08585;Name=ybjP;gbkey=Gene;gene=ybjP;gene_biotype=protein_coding;locus_tag=PHA55_RS08585;old_locus_tag=PHA55_08580
NZ_CP116044.1	Protein Homology	CDS	1774171	1774686	.	-	0	ID=cds-WP_001270740.1;Parent=gene-PHA55_RS08585;Dbxref=Genbank:WP_001270740.1;Name=WP_001270740.1;gbkey=CDS;gene=ybjP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415386.1;locus_tag=PHA55_RS08585;product=lipoprotein;protein_id=WP_001270740.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1774812	1775135	.	+	.	ID=gene-PHA55_RS08590;Name=ybjQ;gbkey=Gene;gene=ybjQ;gene_biotype=protein_coding;locus_tag=PHA55_RS08590;old_locus_tag=PHA55_08585
NZ_CP116044.1	Protein Homology	CDS	1774812	1775135	.	+	0	ID=cds-WP_001160737.1;Parent=gene-PHA55_RS08590;Dbxref=Genbank:WP_001160737.1;Name=WP_001160737.1;gbkey=CDS;gene=ybjQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308979.1;locus_tag=PHA55_RS08590;product=heavy metal-binding domain-containing protein;protein_id=WP_001160737.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1775132	1775962	.	+	.	ID=gene-PHA55_RS08595;Name=amiD;gbkey=Gene;gene=amiD;gene_biotype=protein_coding;locus_tag=PHA55_RS08595;old_locus_tag=PHA55_08590
NZ_CP116044.1	Protein Homology	CDS	1775132	1775962	.	+	0	ID=cds-WP_001255144.1;Parent=gene-PHA55_RS08595;Dbxref=Genbank:WP_001255144.1;Name=WP_001255144.1;gbkey=CDS;gene=amiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308980.1;locus_tag=PHA55_RS08595;product=N-acetylmuramoyl-L-alanine amidase AmiD;protein_id=WP_001255144.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1775959	1776972	.	-	.	ID=gene-PHA55_RS08600;Name=ybjS;gbkey=Gene;gene=ybjS;gene_biotype=protein_coding;locus_tag=PHA55_RS08600;old_locus_tag=PHA55_08595
NZ_CP116044.1	Protein Homology	CDS	1775959	1776972	.	-	0	ID=cds-WP_001338420.1;Parent=gene-PHA55_RS08600;Dbxref=Genbank:WP_001338420.1;Name=WP_001338420.1;gbkey=CDS;gene=ybjS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415389.2;locus_tag=PHA55_RS08600;product=NAD(P)-dependent oxidoreductase;protein_id=WP_001338420.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1777071	1778501	.	-	.	ID=gene-PHA55_RS08605;Name=ybjT;gbkey=Gene;gene=ybjT;gene_biotype=protein_coding;locus_tag=PHA55_RS08605;old_locus_tag=PHA55_08600
NZ_CP116044.1	Protein Homology	CDS	1777071	1778501	.	-	0	ID=cds-WP_001136554.1;Parent=gene-PHA55_RS08605;Dbxref=Genbank:WP_001136554.1;Name=WP_001136554.1;gbkey=CDS;gene=ybjT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415390.4;locus_tag=PHA55_RS08605;product=SDR family oxidoreductase;protein_id=WP_001136554.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1778512	1779513	.	-	.	ID=gene-PHA55_RS08610;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=PHA55_RS08610;old_locus_tag=PHA55_08605
NZ_CP116044.1	Protein Homology	CDS	1778512	1779513	.	-	0	ID=cds-WP_000566372.1;Parent=gene-PHA55_RS08610;Dbxref=Genbank:WP_000566372.1;Name=WP_000566372.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706751.1;locus_tag=PHA55_RS08610;product=low-specificity L-threonine aldolase;protein_id=WP_000566372.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1779550	1781268	.	-	.	ID=gene-PHA55_RS08615;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=PHA55_RS08615;old_locus_tag=PHA55_08610
NZ_CP116044.1	Protein Homology	CDS	1779550	1781268	.	-	0	ID=cds-WP_000815352.1;Parent=gene-PHA55_RS08615;Dbxref=Genbank:WP_000815352.1;Name=WP_000815352.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415392.1;locus_tag=PHA55_RS08615;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_000815352.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1781401	1782369	.	-	.	ID=gene-PHA55_RS08620;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=PHA55_RS08620;old_locus_tag=PHA55_08615
NZ_CP116044.1	Protein Homology	CDS	1781401	1782369	.	-	0	ID=cds-WP_000178673.1;Parent=gene-PHA55_RS08620;Dbxref=Genbank:WP_000178673.1;Name=WP_000178673.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308985.1;locus_tag=PHA55_RS08620;product=NADH oxidoreductase;protein_id=WP_000178673.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1782381	1784033	.	-	.	ID=gene-PHA55_RS08625;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=PHA55_RS08625;old_locus_tag=PHA55_08620
NZ_CP116044.1	Protein Homology	CDS	1782381	1784033	.	-	0	ID=cds-WP_271287511.1;Parent=gene-PHA55_RS08625;Dbxref=Genbank:WP_271287511.1;Name=WP_271287511.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=PHA55_RS08625;product=hydroxylamine reductase;protein_id=WP_271287511.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1784177	1785076	.	-	.	ID=gene-PHA55_RS08630;Name=lysO;gbkey=Gene;gene=lysO;gene_biotype=protein_coding;locus_tag=PHA55_RS08630;old_locus_tag=PHA55_08625
NZ_CP116044.1	Protein Homology	CDS	1784177	1785076	.	-	0	ID=cds-WP_000491142.1;Parent=gene-PHA55_RS08630;Dbxref=Genbank:WP_000491142.1;Name=WP_000491142.1;gbkey=CDS;gene=lysO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415395.2;locus_tag=PHA55_RS08630;product=L-lysine exporter LysO;protein_id=WP_000491142.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1785571	1786266	.	-	.	ID=gene-PHA55_RS08635;Name=aqpZ;gbkey=Gene;gene=aqpZ;gene_biotype=protein_coding;locus_tag=PHA55_RS08635;old_locus_tag=PHA55_08630
NZ_CP116044.1	Protein Homology	CDS	1785571	1786266	.	-	0	ID=cds-WP_001298299.1;Parent=gene-PHA55_RS08635;Dbxref=Genbank:WP_001298299.1;Name=WP_001298299.1;Ontology_term=GO:0006833,GO:0015250;gbkey=CDS;gene=aqpZ;go_function=water channel activity|0015250||IEA;go_process=water transport|0006833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415396.1;locus_tag=PHA55_RS08635;product=aquaporin Z;protein_id=WP_001298299.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1786692	1788350	.	+	.	ID=gene-PHA55_RS08640;Name=ybjD;gbkey=Gene;gene=ybjD;gene_biotype=protein_coding;locus_tag=PHA55_RS08640;old_locus_tag=PHA55_08635
NZ_CP116044.1	Protein Homology	CDS	1786692	1788350	.	+	0	ID=cds-WP_000599806.1;Parent=gene-PHA55_RS08640;Dbxref=Genbank:WP_000599806.1;Name=WP_000599806.1;gbkey=CDS;gene=ybjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706761.1;locus_tag=PHA55_RS08640;product=ATP-dependent endonuclease;protein_id=WP_000599806.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1788347	1789303	.	-	.	ID=gene-PHA55_RS08645;Name=ybjX;gbkey=Gene;gene=ybjX;gene_biotype=protein_coding;locus_tag=PHA55_RS08645;old_locus_tag=PHA55_08640
NZ_CP116044.1	Protein Homology	CDS	1788347	1789303	.	-	0	ID=cds-WP_001355621.1;Parent=gene-PHA55_RS08645;Dbxref=Genbank:WP_001355621.1;Name=WP_001355621.1;gbkey=CDS;gene=ybjX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001322270.1;locus_tag=PHA55_RS08645;product=VirK/YbjX family protein;protein_id=WP_001355621.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1789454	1790569	.	+	.	ID=gene-PHA55_RS08650;Name=macA;gbkey=Gene;gene=macA;gene_biotype=protein_coding;locus_tag=PHA55_RS08650;old_locus_tag=PHA55_08645
NZ_CP116044.1	Protein Homology	CDS	1789454	1790569	.	+	0	ID=cds-WP_000746460.1;Parent=gene-PHA55_RS08650;Dbxref=Genbank:WP_000746460.1;Name=WP_000746460.1;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308991.2;locus_tag=PHA55_RS08650;product=macrolide transporter subunit MacA;protein_id=WP_000746460.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1790566	1792512	.	+	.	ID=gene-PHA55_RS08655;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;locus_tag=PHA55_RS08655;old_locus_tag=PHA55_08650
NZ_CP116044.1	Protein Homology	CDS	1790566	1792512	.	+	0	ID=cds-WP_000188193.1;Parent=gene-PHA55_RS08655;Dbxref=Genbank:WP_000188193.1;Name=WP_000188193.1;Ontology_term=GO:0005524,GO:0016020;gbkey=CDS;gene=macB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308992.1;locus_tag=PHA55_RS08655;product=macrolide ABC transporter ATP-binding protein/permease MacB;protein_id=WP_000188193.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1792585	1792809	.	-	.	ID=gene-PHA55_RS08660;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=PHA55_RS08660;old_locus_tag=PHA55_08655
NZ_CP116044.1	Protein Homology	CDS	1792585	1792809	.	-	0	ID=cds-WP_000410785.1;Parent=gene-PHA55_RS08660;Dbxref=Genbank:WP_000410785.1;Name=WP_000410785.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308993.1;locus_tag=PHA55_RS08660;product=cold shock-like protein CspD;protein_id=WP_000410785.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1792959	1793033	.	+	.	ID=gene-PHA55_RS08665;Name=yljB;gbkey=Gene;gene=yljB;gene_biotype=protein_coding;locus_tag=PHA55_RS08665;old_locus_tag=PHA55_08660
NZ_CP116044.1	Protein Homology	CDS	1792959	1793033	.	+	0	ID=cds-WP_001406719.1;Parent=gene-PHA55_RS08665;Dbxref=Genbank:WP_001406719.1;Name=WP_001406719.1;gbkey=CDS;gene=yljB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051179.1;locus_tag=PHA55_RS08665;product=protein YljB;protein_id=WP_001406719.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1793132	1793452	.	+	.	ID=gene-PHA55_RS08670;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=PHA55_RS08670;old_locus_tag=PHA55_08665
NZ_CP116044.1	Protein Homology	CDS	1793132	1793452	.	+	0	ID=cds-WP_000520781.1;Parent=gene-PHA55_RS08670;Dbxref=Genbank:WP_000520781.1;Name=WP_000520781.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=PHA55_RS08670;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_000520781.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1793483	1795759	.	+	.	ID=gene-PHA55_RS08675;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=PHA55_RS08675;old_locus_tag=PHA55_08670
NZ_CP116044.1	Protein Homology	CDS	1793483	1795759	.	+	0	ID=cds-WP_000934041.1;Parent=gene-PHA55_RS08675;Dbxref=Genbank:WP_000934041.1;Name=WP_000934041.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308995.1;locus_tag=PHA55_RS08675;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_000934041.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1796103	1796190	.	-	.	ID=gene-PHA55_RS08680;Name=PHA55_RS08680;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS08680;old_locus_tag=PHA55_08675
NZ_CP116044.1	tRNAscan-SE	tRNA	1796103	1796190	.	-	.	ID=rna-PHA55_RS08680;Parent=gene-PHA55_RS08680;anticodon=(pos:complement(1796154..1796156));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS08680;product=tRNA-Ser
NZ_CP116044.1	tRNAscan-SE	exon	1796103	1796190	.	-	.	ID=exon-PHA55_RS08680-1;Parent=rna-PHA55_RS08680;anticodon=(pos:complement(1796154..1796156));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS08680;product=tRNA-Ser
NZ_CP116044.1	RefSeq	gene	1796444	1796662	.	-	.	ID=gene-PHA55_RS08685;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=PHA55_RS08685;old_locus_tag=PHA55_08680
NZ_CP116044.1	Protein Homology	CDS	1796444	1796662	.	-	0	ID=cds-WP_001040187.1;Parent=gene-PHA55_RS08685;Dbxref=Genbank:WP_001040187.1;Name=WP_001040187.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=PHA55_RS08685;product=translation initiation factor IF-1;protein_id=WP_001040187.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1796947	1797651	.	-	.	ID=gene-PHA55_RS08690;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=PHA55_RS08690;old_locus_tag=PHA55_08685
NZ_CP116044.1	Protein Homology	CDS	1796947	1797651	.	-	0	ID=cds-WP_001241678.1;Parent=gene-PHA55_RS08690;Dbxref=Genbank:WP_001241678.1;Name=WP_001241678.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyltransferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415405.1;locus_tag=PHA55_RS08690;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_001241678.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1797693	1799414	.	-	.	ID=gene-PHA55_RS08695;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=PHA55_RS08695;old_locus_tag=PHA55_08690
NZ_CP116044.1	Protein Homology	CDS	1797693	1799414	.	-	0	ID=cds-WP_001202188.1;Parent=gene-PHA55_RS08695;Dbxref=Genbank:WP_001202188.1;Name=WP_001202188.1;Ontology_term=GO:0034775,GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=glutathione transmembrane transport|0034775||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415406.1;locus_tag=PHA55_RS08695;product=cysteine/glutathione ABC transporter ATP-binding protein/permease CydC;protein_id=WP_001202188.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1799415	1801181	.	-	.	ID=gene-PHA55_RS08700;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=PHA55_RS08700;old_locus_tag=PHA55_08695
NZ_CP116044.1	Protein Homology	CDS	1799415	1801181	.	-	0	ID=cds-WP_001043587.1;Parent=gene-PHA55_RS08700;Dbxref=Genbank:WP_001043587.1;Name=WP_001043587.1;Ontology_term=GO:0042883,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=cysteine transport|0042883||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415407.1;locus_tag=PHA55_RS08700;product=cysteine/glutathione ABC transporter permease/ATP-binding protein CydD;protein_id=WP_001043587.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1801304	1802269	.	-	.	ID=gene-PHA55_RS08705;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=PHA55_RS08705;old_locus_tag=PHA55_08700
NZ_CP116044.1	Protein Homology	CDS	1801304	1802269	.	-	0	ID=cds-WP_000537418.1;Parent=gene-PHA55_RS08705;Dbxref=Genbank:WP_000537418.1;Name=WP_000537418.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309000.1;locus_tag=PHA55_RS08705;product=thioredoxin-disulfide reductase;protein_id=WP_000537418.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1802814	1803308	.	+	.	ID=gene-PHA55_RS08710;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=PHA55_RS08710;old_locus_tag=PHA55_08705
NZ_CP116044.1	Protein Homology	CDS	1802814	1803308	.	+	0	ID=cds-WP_000228473.1;Parent=gene-PHA55_RS08710;Dbxref=Genbank:WP_000228473.1;Name=WP_000228473.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=PHA55_RS08710;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_000228473.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1803443	1807549	.	+	.	ID=gene-PHA55_RS08715;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=PHA55_RS08715;old_locus_tag=PHA55_08710
NZ_CP116044.1	Protein Homology	CDS	1803443	1807549	.	+	0	ID=cds-WP_000077063.1;Parent=gene-PHA55_RS08715;Dbxref=Genbank:WP_000077063.1;Name=WP_000077063.1;Ontology_term=GO:0003677,GO:0005524;gbkey=CDS;gene=ftsK;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415410.1;locus_tag=PHA55_RS08715;product=DNA translocase FtsK;protein_id=WP_000077063.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1807704	1808315	.	+	.	ID=gene-PHA55_RS08720;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=PHA55_RS08720;old_locus_tag=PHA55_08715
NZ_CP116044.1	Protein Homology	CDS	1807704	1808315	.	+	0	ID=cds-WP_001295343.1;Parent=gene-PHA55_RS08720;Dbxref=Genbank:WP_001295343.1;Name=WP_001295343.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010354356.1;locus_tag=PHA55_RS08720;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_001295343.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1808326	1809669	.	+	.	ID=gene-PHA55_RS08725;Name=rarA;gbkey=Gene;gene=rarA;gene_biotype=protein_coding;gene_synonym=mgsA;locus_tag=PHA55_RS08725;old_locus_tag=PHA55_08720
NZ_CP116044.1	Protein Homology	CDS	1808326	1809669	.	+	0	ID=cds-WP_000067751.1;Parent=gene-PHA55_RS08725;Dbxref=Genbank:WP_000067751.1;Name=WP_000067751.1;gbkey=CDS;gene=rarA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309004.1;locus_tag=PHA55_RS08725;product=replication-associated recombination protein RarA;protein_id=WP_000067751.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1809760	1811052	.	+	.	ID=gene-PHA55_RS08730;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=PHA55_RS08730;old_locus_tag=PHA55_08725
NZ_CP116044.1	Protein Homology	CDS	1809760	1811052	.	+	0	ID=cds-WP_000886683.1;Parent=gene-PHA55_RS08730;Dbxref=Genbank:WP_000886683.1;Name=WP_000886683.1;Ontology_term=GO:0006434,GO:0004828,GO:0005737;gbkey=CDS;gene=serS;go_component=cytoplasm|0005737||IEA;go_function=serine-tRNA ligase activity|0004828||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=PHA55_RS08730;product=serine--tRNA ligase;protein_id=WP_000886683.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1811291	1813735	.	+	.	ID=gene-PHA55_RS08735;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=PHA55_RS08735;old_locus_tag=PHA55_08730
NZ_CP116044.1	Protein Homology	CDS	1811291	1813735	.	+	0	ID=cds-WP_000850313.1;Parent=gene-PHA55_RS08735;Dbxref=Genbank:WP_000850313.1;Name=WP_000850313.1;Ontology_term=GO:0009389,GO:0030151;gbkey=CDS;gene=dmsA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415414.4;locus_tag=PHA55_RS08735;product=dimethylsulfoxide reductase subunit A;protein_id=WP_000850313.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1813746	1814363	.	+	.	ID=gene-PHA55_RS08740;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=PHA55_RS08740;old_locus_tag=PHA55_08735
NZ_CP116044.1	Protein Homology	CDS	1813746	1814363	.	+	0	ID=cds-WP_000213098.1;Parent=gene-PHA55_RS08740;Dbxref=Genbank:WP_000213098.1;Name=WP_000213098.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=PHA55_RS08740;product=dimethylsulfoxide reductase subunit B;protein_id=WP_000213098.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1814365	1815228	.	+	.	ID=gene-PHA55_RS08745;Name=dmsC;gbkey=Gene;gene=dmsC;gene_biotype=protein_coding;locus_tag=PHA55_RS08745;old_locus_tag=PHA55_08740
NZ_CP116044.1	Protein Homology	CDS	1814365	1815228	.	+	0	ID=cds-WP_000534648.1;Parent=gene-PHA55_RS08745;Dbxref=Genbank:WP_000534648.1;Name=WP_000534648.1;gbkey=CDS;gene=dmsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309008.1;locus_tag=PHA55_RS08745;product=dimethyl sulfoxide reductase anchor subunit DmsC;protein_id=WP_000534648.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1815264	1815890	.	-	.	ID=gene-PHA55_RS08750;Name=ycaC;gbkey=Gene;gene=ycaC;gene_biotype=protein_coding;locus_tag=PHA55_RS08750;old_locus_tag=PHA55_08745
NZ_CP116044.1	Protein Homology	CDS	1815264	1815890	.	-	0	ID=cds-WP_000165876.1;Parent=gene-PHA55_RS08750;Dbxref=Genbank:WP_000165876.1;Name=WP_000165876.1;gbkey=CDS;gene=ycaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309009.1;locus_tag=PHA55_RS08750;product=isochorismate family cysteine hydrolase YcaC;protein_id=WP_000165876.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1816205	1817353	.	+	.	ID=gene-PHA55_RS08755;Name=ycaD;gbkey=Gene;gene=ycaD;gene_biotype=protein_coding;locus_tag=PHA55_RS08755;old_locus_tag=PHA55_08750
NZ_CP116044.1	Protein Homology	CDS	1816205	1817353	.	+	0	ID=cds-WP_000109295.1;Parent=gene-PHA55_RS08755;Dbxref=Genbank:WP_000109295.1;Name=WP_000109295.1;gbkey=CDS;gene=ycaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309010.1;locus_tag=PHA55_RS08755;product=MFS transporter;protein_id=WP_000109295.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1817563	1818993	.	+	.	ID=gene-PHA55_RS08760;Name=ycaM;gbkey=Gene;gene=ycaM;gene_biotype=protein_coding;locus_tag=PHA55_RS08760;old_locus_tag=PHA55_08755
NZ_CP116044.1	Protein Homology	CDS	1817563	1818993	.	+	0	ID=cds-WP_000918506.1;Parent=gene-PHA55_RS08760;Dbxref=Genbank:WP_000918506.1;Name=WP_000918506.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ycaM;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415419.2;locus_tag=PHA55_RS08760;product=amino acid permease;protein_id=WP_000918506.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1818994	1819902	.	-	.	ID=gene-PHA55_RS08765;Name=ycaN;gbkey=Gene;gene=ycaN;gene_biotype=protein_coding;locus_tag=PHA55_RS08765;old_locus_tag=PHA55_08760
NZ_CP116044.1	Protein Homology	CDS	1818994	1819902	.	-	0	ID=cds-WP_001242675.1;Parent=gene-PHA55_RS08765;Dbxref=Genbank:WP_001242675.1;Name=WP_001242675.1;gbkey=CDS;gene=ycaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415420.1;locus_tag=PHA55_RS08765;product=LysR family transcriptional regulator;protein_id=WP_001242675.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1820002	1820592	.	+	.	ID=gene-PHA55_RS08770;Name=ycaK;gbkey=Gene;gene=ycaK;gene_biotype=protein_coding;locus_tag=PHA55_RS08770;old_locus_tag=PHA55_08765
NZ_CP116044.1	Protein Homology	CDS	1820002	1820592	.	+	0	ID=cds-WP_001190375.1;Parent=gene-PHA55_RS08770;Dbxref=Genbank:WP_001190375.1;Name=WP_001190375.1;gbkey=CDS;gene=ycaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415421.1;locus_tag=PHA55_RS08770;product=NAD(P)H oxidoreductase;protein_id=WP_001190375.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1820674	1821414	.	-	.	ID=gene-PHA55_RS08775;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=PHA55_RS08775;old_locus_tag=PHA55_08770
NZ_CP116044.1	Protein Homology	CDS	1820674	1821414	.	-	0	ID=cds-WP_000111043.1;Parent=gene-PHA55_RS08775;Dbxref=Genbank:WP_000111043.1;Name=WP_000111043.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309012.1;locus_tag=PHA55_RS08775;product=pyruvate formate lyase 1-activating protein;protein_id=WP_000111043.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1821606	1823888	.	-	.	ID=gene-PHA55_RS08780;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=PHA55_RS08780;old_locus_tag=PHA55_08775
NZ_CP116044.1	Protein Homology	CDS	1821606	1823888	.	-	0	ID=cds-WP_001292820.1;Parent=gene-PHA55_RS08780;Dbxref=Genbank:WP_001292820.1;Name=WP_001292820.1;Ontology_term=GO:0006113,GO:0015942,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=fermentation|0006113||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415423.1;locus_tag=PHA55_RS08780;product=formate C-acetyltransferase;protein_id=WP_001292820.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1823943	1824800	.	-	.	ID=gene-PHA55_RS08785;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=PHA55_RS08785;old_locus_tag=PHA55_08780
NZ_CP116044.1	Protein Homology	CDS	1823943	1824800	.	-	0	ID=cds-WP_000642546.1;Parent=gene-PHA55_RS08785;Dbxref=Genbank:WP_000642546.1;Name=WP_000642546.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309014.1;locus_tag=PHA55_RS08785;product=formate transporter FocA;protein_id=WP_000642546.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1825206	1826966	.	-	.	ID=gene-PHA55_RS08790;Name=ycaO;gbkey=Gene;gene=ycaO;gene_biotype=protein_coding;locus_tag=PHA55_RS08790;old_locus_tag=PHA55_08785
NZ_CP116044.1	Protein Homology	CDS	1825206	1826966	.	-	0	ID=cds-WP_001297197.1;Parent=gene-PHA55_RS08790;Dbxref=Genbank:WP_001297197.1;Name=WP_001297197.1;gbkey=CDS;gene=ycaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415425.4;locus_tag=PHA55_RS08790;product=30S ribosomal protein S12 methylthiotransferase accessory protein YcaO;protein_id=WP_001297197.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1827096	1827788	.	+	.	ID=gene-PHA55_RS08795;Name=ycaP;gbkey=Gene;gene=ycaP;gene_biotype=protein_coding;locus_tag=PHA55_RS08795;old_locus_tag=PHA55_08790
NZ_CP116044.1	Protein Homology	CDS	1827096	1827788	.	+	0	ID=cds-WP_000642849.1;Parent=gene-PHA55_RS08795;Dbxref=Genbank:WP_000642849.1;Name=WP_000642849.1;gbkey=CDS;gene=ycaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415426.1;locus_tag=PHA55_RS08795;product=DUF421 domain-containing protein;protein_id=WP_000642849.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1827987	1829075	.	+	.	ID=gene-PHA55_RS08800;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=PHA55_RS08800;old_locus_tag=PHA55_08795
NZ_CP116044.1	Protein Homology	CDS	1827987	1829075	.	+	0	ID=cds-WP_000057149.1;Parent=gene-PHA55_RS08800;Dbxref=Genbank:WP_000057149.1;Name=WP_000057149.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706825.1;locus_tag=PHA55_RS08800;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_000057149.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1829146	1830429	.	+	.	ID=gene-PHA55_RS08805;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=PHA55_RS08805;old_locus_tag=PHA55_08800
NZ_CP116044.1	Protein Homology	CDS	1829146	1830429	.	+	0	ID=cds-WP_000445231.1;Parent=gene-PHA55_RS08805;Dbxref=Genbank:WP_000445231.1;Name=WP_000445231.1;Ontology_term=GO:0009423,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309018.1;locus_tag=PHA55_RS08805;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_000445231.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1830598	1831362	.	+	.	ID=gene-PHA55_RS08810;Name=ycaL;gbkey=Gene;gene=ycaL;gene_biotype=protein_coding;locus_tag=PHA55_RS08810;old_locus_tag=PHA55_08805
NZ_CP116044.1	Protein Homology	CDS	1830598	1831362	.	+	0	ID=cds-WP_001295345.1;Parent=gene-PHA55_RS08810;Dbxref=Genbank:WP_001295345.1;Name=WP_001295345.1;gbkey=CDS;gene=ycaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706828.2;locus_tag=PHA55_RS08810;product=metallopeptidase YcaL;protein_id=WP_001295345.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1831535	1832218	.	+	.	ID=gene-PHA55_RS08815;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=PHA55_RS08815;old_locus_tag=PHA55_08810
NZ_CP116044.1	Protein Homology	CDS	1831535	1832218	.	+	0	ID=cds-WP_000125016.1;Parent=gene-PHA55_RS08815;Dbxref=Genbank:WP_000125016.1;Name=WP_000125016.1;Ontology_term=GO:0015949,GO:0004127;gbkey=CDS;gene=cmk;go_function=cytidylate kinase activity|0004127||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125007.1;locus_tag=PHA55_RS08815;product=(d)CMP kinase;protein_id=WP_000125016.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1832329	1834002	.	+	.	ID=gene-PHA55_RS08820;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=PHA55_RS08820;old_locus_tag=PHA55_08815
NZ_CP116044.1	Protein Homology	CDS	1832329	1834002	.	+	0	ID=cds-WP_000140327.1;Parent=gene-PHA55_RS08820;Dbxref=Genbank:WP_000140327.1;Name=WP_000140327.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=PHA55_RS08820;product=30S ribosomal protein S1;protein_id=WP_000140327.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1834162	1834446	.	+	.	ID=gene-PHA55_RS08825;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=PHA55_RS08825;old_locus_tag=PHA55_08820
NZ_CP116044.1	Protein Homology	CDS	1834162	1834446	.	+	0	ID=cds-WP_000167336.1;Parent=gene-PHA55_RS08825;Dbxref=Genbank:WP_000167336.1;Name=WP_000167336.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677;gbkey=CDS;gene=ihfB;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819309.1;locus_tag=PHA55_RS08825;product=integration host factor subunit beta;protein_id=WP_000167336.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1834653	1836917	.	+	.	ID=gene-PHA55_RS08830;Name=ycaI;gbkey=Gene;gene=ycaI;gene_biotype=protein_coding;locus_tag=PHA55_RS08830;old_locus_tag=PHA55_08825
NZ_CP116044.1	Protein Homology	CDS	1834653	1836917	.	+	0	ID=cds-WP_000705710.1;Parent=gene-PHA55_RS08830;Dbxref=Genbank:WP_000705710.1;Name=WP_000705710.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;gene=ycaI;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309023.2;locus_tag=PHA55_RS08830;product=ComEC family protein;protein_id=WP_000705710.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1836954	1838702	.	+	.	ID=gene-PHA55_RS08835;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=PHA55_RS08835;old_locus_tag=PHA55_08830
NZ_CP116044.1	Protein Homology	CDS	1836954	1838702	.	+	0	ID=cds-WP_000551270.1;Parent=gene-PHA55_RS08835;Dbxref=Genbank:WP_000551270.1;Name=WP_000551270.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309024.1;locus_tag=PHA55_RS08835;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_000551270.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1838699	1839685	.	+	.	ID=gene-PHA55_RS08840;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=PHA55_RS08840;old_locus_tag=PHA55_08835
NZ_CP116044.1	Protein Homology	CDS	1838699	1839685	.	+	0	ID=cds-WP_000570540.1;Parent=gene-PHA55_RS08840;Dbxref=Genbank:WP_000570540.1;Name=WP_000570540.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706833.1;locus_tag=PHA55_RS08840;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_000570540.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1839722	1840954	.	+	.	ID=gene-PHA55_RS08845;Name=ycaQ;gbkey=Gene;gene=ycaQ;gene_biotype=protein_coding;locus_tag=PHA55_RS08845;old_locus_tag=PHA55_08840
NZ_CP116044.1	Protein Homology	CDS	1839722	1840954	.	+	0	ID=cds-WP_000056503.1;Parent=gene-PHA55_RS08845;Dbxref=Genbank:WP_000056503.1;Name=WP_000056503.1;gbkey=CDS;gene=ycaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706834.1;locus_tag=PHA55_RS08845;product=crosslink repair DNA glycosylase YcaQ;protein_id=WP_000056503.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1841006	1841188	.	+	.	ID=gene-PHA55_RS08850;Name=ycaR;gbkey=Gene;gene=ycaR;gene_biotype=protein_coding;locus_tag=PHA55_RS08850;old_locus_tag=PHA55_08845
NZ_CP116044.1	Protein Homology	CDS	1841006	1841188	.	+	0	ID=cds-WP_000350058.1;Parent=gene-PHA55_RS08850;Dbxref=Genbank:WP_000350058.1;Name=WP_000350058.1;gbkey=CDS;gene=ycaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309027.1;locus_tag=PHA55_RS08850;product=protein YcaR;protein_id=WP_000350058.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1841185	1841931	.	+	.	ID=gene-PHA55_RS08855;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=PHA55_RS08855;old_locus_tag=PHA55_08850
NZ_CP116044.1	Protein Homology	CDS	1841185	1841931	.	+	0	ID=cds-WP_000011590.1;Parent=gene-PHA55_RS08855;Dbxref=Genbank:WP_000011590.1;Name=WP_000011590.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415438.1;locus_tag=PHA55_RS08855;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_000011590.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1842085	1842978	.	+	.	ID=gene-PHA55_RS08860;Name=ycbJ;gbkey=Gene;gene=ycbJ;gene_biotype=protein_coding;locus_tag=PHA55_RS08860;old_locus_tag=PHA55_08855
NZ_CP116044.1	Protein Homology	CDS	1842085	1842978	.	+	0	ID=cds-WP_000436922.1;Parent=gene-PHA55_RS08860;Dbxref=Genbank:WP_000436922.1;Name=WP_000436922.1;gbkey=CDS;gene=ycbJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309029.1;locus_tag=PHA55_RS08860;product=YcbJ family phosphotransferase;protein_id=WP_000436922.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1842955	1843734	.	-	.	ID=gene-PHA55_RS08865;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=PHA55_RS08865;old_locus_tag=PHA55_08860
NZ_CP116044.1	Protein Homology	CDS	1842955	1843734	.	-	0	ID=cds-WP_000899591.1;Parent=gene-PHA55_RS08865;Dbxref=Genbank:WP_000899591.1;Name=WP_000899591.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309030.1;locus_tag=PHA55_RS08865;product=envelope biogenesis factor ElyC;protein_id=WP_000899591.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1843870	1844655	.	+	.	ID=gene-PHA55_RS08870;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=PHA55_RS08870;old_locus_tag=PHA55_08865
NZ_CP116044.1	Protein Homology	CDS	1843870	1844655	.	+	0	ID=cds-WP_001298300.1;Parent=gene-PHA55_RS08870;Dbxref=Genbank:WP_001298300.1;Name=WP_001298300.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415441.1;locus_tag=PHA55_RS08870;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=WP_001298300.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1844652	1845974	.	+	.	ID=gene-PHA55_RS08875;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=PHA55_RS08875;old_locus_tag=PHA55_08870
NZ_CP116044.1	Protein Homology	CDS	1844652	1845974	.	+	0	ID=cds-WP_001288850.1;Parent=gene-PHA55_RS08875;Dbxref=Genbank:WP_001288850.1;Name=WP_001288850.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=PHA55_RS08875;product=chromosome partition protein MukF;protein_id=WP_001288850.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1845955	1846659	.	+	.	ID=gene-PHA55_RS08880;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=PHA55_RS08880;old_locus_tag=PHA55_08875
NZ_CP116044.1	Protein Homology	CDS	1845955	1846659	.	+	0	ID=cds-WP_001295347.1;Parent=gene-PHA55_RS08880;Dbxref=Genbank:WP_001295347.1;Name=WP_001295347.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415443.2;locus_tag=PHA55_RS08880;product=chromosome partition protein MukE;protein_id=WP_001295347.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1846659	1851119	.	+	.	ID=gene-PHA55_RS08885;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=PHA55_RS08885;old_locus_tag=PHA55_08880
NZ_CP116044.1	Protein Homology	CDS	1846659	1851119	.	+	0	ID=cds-WP_001471316.1;Parent=gene-PHA55_RS08885;Dbxref=Genbank:WP_001471316.1;Name=WP_001471316.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309034.1;locus_tag=PHA55_RS08885;product=chromosome partition protein MukB;protein_id=WP_001471316.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1851380	1853227	.	+	.	ID=gene-PHA55_RS08890;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=PHA55_RS08890;old_locus_tag=PHA55_08885
NZ_CP116044.1	Protein Homology	CDS	1851380	1853227	.	+	0	ID=cds-WP_000925997.1;Parent=gene-PHA55_RS08890;Dbxref=Genbank:WP_000925997.1;Name=WP_000925997.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415445.1;locus_tag=PHA55_RS08890;product=L%2CD-transpeptidase;protein_id=WP_000925997.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1853408	1853956	.	+	.	ID=gene-PHA55_RS08895;Name=mepK;gbkey=Gene;gene=mepK;gene_biotype=protein_coding;locus_tag=PHA55_RS08895;old_locus_tag=PHA55_08890
NZ_CP116044.1	Protein Homology	CDS	1853408	1853956	.	+	0	ID=cds-WP_001295932.1;Parent=gene-PHA55_RS08895;Dbxref=Genbank:WP_001295932.1;Name=WP_001295932.1;gbkey=CDS;gene=mepK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309036.1;locus_tag=PHA55_RS08895;product=YcbK family protein;protein_id=WP_001295932.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1853983	1854630	.	+	.	ID=gene-PHA55_RS08900;Name=gloC;gbkey=Gene;gene=gloC;gene_biotype=protein_coding;locus_tag=PHA55_RS08900;old_locus_tag=PHA55_08895
NZ_CP116044.1	Protein Homology	CDS	1853983	1854630	.	+	0	ID=cds-WP_001109487.1;Parent=gene-PHA55_RS08900;Dbxref=Genbank:WP_001109487.1;Name=WP_001109487.1;gbkey=CDS;gene=gloC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035823.1;locus_tag=PHA55_RS08900;product=hydroxyacylglutathione hydrolase GloC;protein_id=WP_001109487.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1854852	1856042	.	-	.	ID=gene-PHA55_RS08905;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=PHA55_RS08905;old_locus_tag=PHA55_08900
NZ_CP116044.1	Protein Homology	CDS	1854852	1856042	.	-	0	ID=cds-WP_000462687.1;Parent=gene-PHA55_RS08905;Dbxref=Genbank:WP_000462687.1;Name=WP_000462687.1;gbkey=CDS;gene=aspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=PHA55_RS08905;product=aspartate transaminase;protein_id=WP_000462687.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1856227	1857315	.	-	.	ID=gene-PHA55_RS08910;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=PHA55_RS08910;old_locus_tag=PHA55_08905
NZ_CP116044.1	Protein Homology	CDS	1856227	1857315	.	-	0	ID=cds-WP_000977920.1;Parent=gene-PHA55_RS08910;Dbxref=Genbank:WP_000977920.1;Name=WP_000977920.1;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415449.1;locus_tag=PHA55_RS08910;product=porin OmpF;protein_id=WP_000977920.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1857917	1859317	.	-	.	ID=gene-PHA55_RS08915;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=PHA55_RS08915;old_locus_tag=PHA55_08910
NZ_CP116044.1	Protein Homology	CDS	1857917	1859317	.	-	0	ID=cds-WP_271287512.1;Parent=gene-PHA55_RS08915;Dbxref=Genbank:WP_271287512.1;Name=WP_271287512.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=PHA55_RS08915;product=asparagine--tRNA ligase;protein_id=WP_271287512.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1859486	1860688	.	-	.	ID=gene-PHA55_RS08920;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=PHA55_RS08920;old_locus_tag=PHA55_08915
NZ_CP116044.1	Protein Homology	CDS	1859486	1860688	.	-	0	ID=cds-WP_001297200.1;Parent=gene-PHA55_RS08920;Dbxref=Genbank:WP_001297200.1;Name=WP_001297200.1;Ontology_term=GO:0019358,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=nicotinate nucleotide salvage|0019358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706850.2;locus_tag=PHA55_RS08920;product=nicotinate phosphoribosyltransferase;protein_id=WP_001297200.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1860954	1863566	.	+	.	ID=gene-PHA55_RS08925;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=PHA55_RS08925;old_locus_tag=PHA55_08920
NZ_CP116044.1	Protein Homology	CDS	1860954	1863566	.	+	0	ID=cds-WP_000193844.1;Parent=gene-PHA55_RS08925;Dbxref=Genbank:WP_000193844.1;Name=WP_000193844.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=PHA55_RS08925;product=aminopeptidase N;protein_id=WP_000193844.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1863773	1864540	.	-	.	ID=gene-PHA55_RS08930;Name=ssuB;gbkey=Gene;gene=ssuB;gene_biotype=protein_coding;locus_tag=PHA55_RS08930;old_locus_tag=PHA55_08925
NZ_CP116044.1	Protein Homology	CDS	1863773	1864540	.	-	0	ID=cds-WP_001090514.1;Parent=gene-PHA55_RS08930;Dbxref=Genbank:WP_001090514.1;Name=WP_001090514.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ssuB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706852.1;locus_tag=PHA55_RS08930;product=aliphatic sulfonates ABC transporter ATP-binding protein;protein_id=WP_001090514.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1864537	1865328	.	-	.	ID=gene-PHA55_RS08935;Name=ssuC;gbkey=Gene;gene=ssuC;gene_biotype=protein_coding;locus_tag=PHA55_RS08935;old_locus_tag=PHA55_08930
NZ_CP116044.1	Protein Homology	CDS	1864537	1865328	.	-	0	ID=cds-WP_000235203.1;Parent=gene-PHA55_RS08935;Dbxref=Genbank:WP_000235203.1;Name=WP_000235203.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=ssuC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415454.4;locus_tag=PHA55_RS08935;product=aliphatic sulfonate ABC transporter permease SsuC;protein_id=WP_000235203.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1865339	1866484	.	-	.	ID=gene-PHA55_RS08940;Name=ssuD;gbkey=Gene;gene=ssuD;gene_biotype=protein_coding;locus_tag=PHA55_RS08940;old_locus_tag=PHA55_08935
NZ_CP116044.1	Protein Homology	CDS	1865339	1866484	.	-	0	ID=cds-WP_000055996.1;Parent=gene-PHA55_RS08940;Dbxref=Genbank:WP_000055996.1;Name=WP_000055996.1;Ontology_term=GO:0006790,GO:0008726,GO:0010181;gbkey=CDS;gene=ssuD;go_function=alkanesulfonate monooxygenase activity|0008726||IEA,FMN binding|0010181||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706856.1;locus_tag=PHA55_RS08940;product=FMNH2-dependent alkanesulfonate monooxygenase;protein_id=WP_000055996.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1866481	1867440	.	-	.	ID=gene-PHA55_RS08945;Name=ssuA;gbkey=Gene;gene=ssuA;gene_biotype=protein_coding;locus_tag=PHA55_RS08945;old_locus_tag=PHA55_08940
NZ_CP116044.1	Protein Homology	CDS	1866481	1867440	.	-	0	ID=cds-WP_001244318.1;Parent=gene-PHA55_RS08945;Dbxref=Genbank:WP_001244318.1;Name=WP_001244318.1;gbkey=CDS;gene=ssuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415456.4;locus_tag=PHA55_RS08945;product=aliphatic sulfonate ABC transporter substrate-binding protein SsuA;protein_id=WP_001244318.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1867433	1868008	.	-	.	ID=gene-PHA55_RS08950;Name=ssuE;gbkey=Gene;gene=ssuE;gene_biotype=protein_coding;locus_tag=PHA55_RS08950;old_locus_tag=PHA55_08945
NZ_CP116044.1	Protein Homology	CDS	1867433	1868008	.	-	0	ID=cds-WP_001263934.1;Parent=gene-PHA55_RS08950;Dbxref=Genbank:WP_001263934.1;Name=WP_001263934.1;Ontology_term=GO:0046306,GO:0008752;gbkey=CDS;gene=ssuE;go_function=FMN reductase activity|0008752||IEA;go_process=alkanesulfonate catabolic process|0046306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415457.1;locus_tag=PHA55_RS08950;product=NADPH-dependent FMN reductase;protein_id=WP_001263934.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1868364	1868906	.	+	.	ID=gene-PHA55_RS08955;Name=PHA55_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS08955;old_locus_tag=PHA55_08950
NZ_CP116044.1	Protein Homology	CDS	1868364	1868906	.	+	0	ID=cds-WP_000750284.1;Parent=gene-PHA55_RS08955;Dbxref=Genbank:WP_000750284.1;Name=WP_000750284.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415458.2;locus_tag=PHA55_RS08955;product=fimbrial protein;protein_id=WP_000750284.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1868989	1869690	.	+	.	ID=gene-PHA55_RS08960;Name=elfD;gbkey=Gene;gene=elfD;gene_biotype=protein_coding;locus_tag=PHA55_RS08960;old_locus_tag=PHA55_08955
NZ_CP116044.1	Protein Homology	CDS	1868989	1869690	.	+	0	ID=cds-WP_000845152.1;Parent=gene-PHA55_RS08960;Dbxref=Genbank:WP_000845152.1;Name=WP_000845152.1;gbkey=CDS;gene=elfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415459.1;locus_tag=PHA55_RS08960;product=molecular chaperone;protein_id=WP_000845152.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1869715	1872315	.	+	.	ID=gene-PHA55_RS08965;Name=elfC;gbkey=Gene;gene=elfC;gene_biotype=protein_coding;locus_tag=PHA55_RS08965;old_locus_tag=PHA55_08960
NZ_CP116044.1	Protein Homology	CDS	1869715	1872315	.	+	0	ID=cds-WP_000286325.1;Parent=gene-PHA55_RS08965;Dbxref=Genbank:WP_000286325.1;Name=WP_000286325.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;gene=elfC;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706863.2;locus_tag=PHA55_RS08965;product=fimbrial biogenesis usher protein;protein_id=WP_000286325.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1872306	1873376	.	+	.	ID=gene-PHA55_RS08970;Name=elfG;gbkey=Gene;gene=elfG;gene_biotype=protein_coding;locus_tag=PHA55_RS08970;old_locus_tag=PHA55_08965
NZ_CP116044.1	Protein Homology	CDS	1872306	1873376	.	+	0	ID=cds-WP_001165655.1;Parent=gene-PHA55_RS08970;Dbxref=Genbank:WP_001165655.1;Name=WP_001165655.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=elfG;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415461.1;locus_tag=PHA55_RS08970;product=fimbrial protein;protein_id=WP_001165655.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1873388	1873930	.	+	.	ID=gene-PHA55_RS08975;Name=ycbU;gbkey=Gene;gene=ycbU;gene_biotype=protein_coding;locus_tag=PHA55_RS08975;old_locus_tag=PHA55_08970
NZ_CP116044.1	Protein Homology	CDS	1873388	1873930	.	+	0	ID=cds-WP_000730612.1;Parent=gene-PHA55_RS08975;Dbxref=Genbank:WP_000730612.1;Name=WP_000730612.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=ycbU;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415462.1;locus_tag=PHA55_RS08975;product=fimbrial protein;protein_id=WP_000730612.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1873938	1874453	.	+	.	ID=gene-PHA55_RS08980;Name=ycbV;gbkey=Gene;gene=ycbV;gene_biotype=protein_coding;locus_tag=PHA55_RS08980;old_locus_tag=PHA55_08975
NZ_CP116044.1	Protein Homology	CDS	1873938	1874453	.	+	0	ID=cds-WP_000919489.1;Parent=gene-PHA55_RS08980;Dbxref=Genbank:WP_000919489.1;Name=WP_000919489.1;gbkey=CDS;gene=ycbV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415463.2;locus_tag=PHA55_RS08980;product=fimbrial protein;protein_id=WP_000919489.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1874419	1875156	.	+	.	ID=gene-PHA55_RS08985;Name=ycbF;gbkey=Gene;gene=ycbF;gene_biotype=protein_coding;locus_tag=PHA55_RS08985;old_locus_tag=PHA55_08980
NZ_CP116044.1	Protein Homology	CDS	1874419	1875156	.	+	0	ID=cds-WP_001111470.1;Parent=gene-PHA55_RS08985;Dbxref=Genbank:WP_001111470.1;Name=WP_001111470.1;gbkey=CDS;gene=ycbF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706867.1;locus_tag=PHA55_RS08985;product=fimbrial chaperone;protein_id=WP_001111470.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1875267	1876277	.	+	.	ID=gene-PHA55_RS08990;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=PHA55_RS08990;old_locus_tag=PHA55_08985
NZ_CP116044.1	Protein Homology	CDS	1875267	1876277	.	+	0	ID=cds-WP_001295352.1;Parent=gene-PHA55_RS08990;Dbxref=Genbank:WP_001295352.1;Name=WP_001295352.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309056.1;locus_tag=PHA55_RS08990;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_001295352.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1876451	1876993	.	+	.	ID=gene-PHA55_RS08995;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=PHA55_RS08995;old_locus_tag=PHA55_08990
NZ_CP116044.1	Protein Homology	CDS	1876451	1876993	.	+	0	ID=cds-WP_271287513.1;Parent=gene-PHA55_RS08995;Dbxref=Genbank:WP_271287513.1;Name=WP_271287513.1;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415466.4;locus_tag=PHA55_RS08995;product=cell division protein ZapC;protein_id=WP_271287513.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1876990	1878099	.	-	.	ID=gene-PHA55_RS09000;Name=ycbX;gbkey=Gene;gene=ycbX;gene_biotype=protein_coding;locus_tag=PHA55_RS09000;old_locus_tag=PHA55_08995
NZ_CP116044.1	Protein Homology	CDS	1876990	1878099	.	-	0	ID=cds-WP_000224273.1;Parent=gene-PHA55_RS09000;Dbxref=Genbank:WP_000224273.1;Name=WP_000224273.1;gbkey=CDS;gene=ycbX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706870.1;locus_tag=PHA55_RS09000;product=6-N-hydroxylaminopurine resistance protein YcbX;protein_id=WP_000224273.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1878343	1880451	.	+	.	ID=gene-PHA55_RS09005;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=PHA55_RS09005;old_locus_tag=PHA55_09000
NZ_CP116044.1	Protein Homology	CDS	1878343	1880451	.	+	0	ID=cds-WP_001086549.1;Parent=gene-PHA55_RS09005;Dbxref=Genbank:WP_001086549.1;Name=WP_001086549.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309059.1;locus_tag=PHA55_RS09005;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_001086549.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1880463	1882370	.	+	.	ID=gene-PHA55_RS09010;Name=uup;gbkey=Gene;gene=uup;gene_biotype=protein_coding;locus_tag=PHA55_RS09010;old_locus_tag=PHA55_09005
NZ_CP116044.1	Protein Homology	CDS	1880463	1882370	.	+	0	ID=cds-WP_000053099.1;Parent=gene-PHA55_RS09010;Dbxref=Genbank:WP_000053099.1;Name=WP_000053099.1;Ontology_term=GO:0005524;gbkey=CDS;gene=uup;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415469.1;locus_tag=PHA55_RS09010;product=ABC transporter ATP-binding protein;protein_id=WP_000053099.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1882500	1883753	.	+	.	ID=gene-PHA55_RS09015;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=PHA55_RS09015;old_locus_tag=PHA55_09010
NZ_CP116044.1	Protein Homology	CDS	1882500	1883753	.	+	0	ID=cds-WP_000333176.1;Parent=gene-PHA55_RS09015;Dbxref=Genbank:WP_000333176.1;Name=WP_000333176.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415470.1;locus_tag=PHA55_RS09015;product=membrane integrity-associated transporter subunit PqiA;protein_id=WP_000333176.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1883758	1885398	.	+	.	ID=gene-PHA55_RS09020;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=PHA55_RS09020;old_locus_tag=PHA55_09015
NZ_CP116044.1	Protein Homology	CDS	1883758	1885398	.	+	0	ID=cds-WP_000445533.1;Parent=gene-PHA55_RS09020;Dbxref=Genbank:WP_000445533.1;Name=WP_000445533.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415471.1;locus_tag=PHA55_RS09020;product=intermembrane transport protein PqiB;protein_id=WP_000445533.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1885395	1885958	.	+	.	ID=gene-PHA55_RS09025;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=PHA55_RS09025;old_locus_tag=PHA55_09020
NZ_CP116044.1	Protein Homology	CDS	1885395	1885958	.	+	0	ID=cds-WP_000759120.1;Parent=gene-PHA55_RS09025;Dbxref=Genbank:WP_000759120.1;Name=WP_000759120.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706875.1;locus_tag=PHA55_RS09025;product=membrane integrity-associated transporter subunit PqiC;protein_id=WP_000759120.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1886214	1886381	.	+	.	ID=gene-PHA55_RS09030;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=PHA55_RS09030;old_locus_tag=PHA55_09025
NZ_CP116044.1	Protein Homology	CDS	1886214	1886381	.	+	0	ID=cds-WP_000828648.1;Parent=gene-PHA55_RS09030;Dbxref=Genbank:WP_000828648.1;Name=WP_000828648.1;gbkey=CDS;gene=rmf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309064.1;locus_tag=PHA55_RS09030;product=ribosome modulation factor;protein_id=WP_000828648.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1886451	1886969	.	-	.	ID=gene-PHA55_RS09035;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=PHA55_RS09035;old_locus_tag=PHA55_09030
NZ_CP116044.1	Protein Homology	CDS	1886451	1886969	.	-	0	ID=cds-WP_000227927.1;Parent=gene-PHA55_RS09035;Dbxref=Genbank:WP_000227927.1;Name=WP_000227927.1;Ontology_term=GO:0006633,GO:0008693;gbkey=CDS;gene=fabA;go_function=3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity|0008693||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915875.1;locus_tag=PHA55_RS09035;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_000227927.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1887038	1888798	.	-	.	ID=gene-PHA55_RS09040;Name=ycbZ;gbkey=Gene;gene=ycbZ;gene_biotype=protein_coding;locus_tag=PHA55_RS09040;old_locus_tag=PHA55_09035
NZ_CP116044.1	Protein Homology	CDS	1887038	1888798	.	-	0	ID=cds-WP_000156526.1;Parent=gene-PHA55_RS09040;Dbxref=Genbank:WP_000156526.1;Name=WP_000156526.1;gbkey=CDS;gene=ycbZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309066.1;locus_tag=PHA55_RS09040;product=Lon protease family protein;protein_id=WP_000156526.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1888984	1889436	.	+	.	ID=gene-PHA55_RS09045;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=PHA55_RS09045;old_locus_tag=PHA55_09040
NZ_CP116044.1	Protein Homology	CDS	1888984	1889436	.	+	0	ID=cds-WP_000877161.1;Parent=gene-PHA55_RS09045;Dbxref=Genbank:WP_000877161.1;Name=WP_000877161.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309067.1;locus_tag=PHA55_RS09045;product=macrodomain Ter protein MatP;protein_id=WP_000877161.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1889512	1890552	.	-	.	ID=gene-PHA55_RS09050;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=PHA55_RS09050;old_locus_tag=PHA55_09045
NZ_CP116044.1	Protein Homology	CDS	1889512	1890552	.	-	0	ID=cds-WP_000750416.1;Parent=gene-PHA55_RS09050;Dbxref=Genbank:WP_000750416.1;Name=WP_000750416.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309068.1;locus_tag=PHA55_RS09050;product=porin OmpA;protein_id=WP_000750416.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1890909	1891418	.	-	.	ID=gene-PHA55_RS09055;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=PHA55_RS09055;old_locus_tag=PHA55_09050
NZ_CP116044.1	Protein Homology	CDS	1890909	1891418	.	-	0	ID=cds-WP_000288710.1;Parent=gene-PHA55_RS09055;Dbxref=Genbank:WP_000288710.1;Name=WP_000288710.1;gbkey=CDS;gene=sulA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309069.1;locus_tag=PHA55_RS09055;product=cell division inhibitor SulA;protein_id=WP_000288710.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1891637	1892266	.	+	.	ID=gene-PHA55_RS09060;Name=sxy;gbkey=Gene;gene=sxy;gene_biotype=protein_coding;locus_tag=PHA55_RS09060;old_locus_tag=PHA55_09055
NZ_CP116044.1	Protein Homology	CDS	1891637	1892266	.	+	0	ID=cds-WP_000839153.1;Parent=gene-PHA55_RS09060;Dbxref=Genbank:WP_000839153.1;Name=WP_000839153.1;gbkey=CDS;gene=sxy;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415479.1;locus_tag=PHA55_RS09060;product=CRP-S regulon transcriptional coactivator Sxy;protein_id=WP_000839153.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1892229	1894391	.	-	.	ID=gene-PHA55_RS09065;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=PHA55_RS09065;old_locus_tag=PHA55_09060
NZ_CP116044.1	Protein Homology	CDS	1892229	1894391	.	-	0	ID=cds-WP_000875044.1;Parent=gene-PHA55_RS09065;Dbxref=Genbank:WP_000875044.1;Name=WP_000875044.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309071.3;locus_tag=PHA55_RS09065;product=YccS family putative transporter;protein_id=WP_000875044.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1894401	1894847	.	-	.	ID=gene-PHA55_RS09070;Name=yccF;gbkey=Gene;gene=yccF;gene_biotype=protein_coding;locus_tag=PHA55_RS09070;old_locus_tag=PHA55_09065
NZ_CP116044.1	Protein Homology	CDS	1894401	1894847	.	-	0	ID=cds-WP_001261231.1;Parent=gene-PHA55_RS09070;Dbxref=Genbank:WP_001261231.1;Name=WP_001261231.1;gbkey=CDS;gene=yccF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309072.1;locus_tag=PHA55_RS09070;product=YccF domain-containing protein;protein_id=WP_001261231.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1894970	1897024	.	+	.	ID=gene-PHA55_RS09075;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=PHA55_RS09075;old_locus_tag=PHA55_09070
NZ_CP116044.1	Protein Homology	CDS	1894970	1897024	.	+	0	ID=cds-WP_000420536.1;Parent=gene-PHA55_RS09075;Dbxref=Genbank:WP_000420536.1;Name=WP_000420536.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415482.1;locus_tag=PHA55_RS09075;product=DNA helicase IV;protein_id=WP_000420536.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1897056	1897514	.	-	.	ID=gene-PHA55_RS09080;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=PHA55_RS09080;old_locus_tag=PHA55_09075
NZ_CP116044.1	Protein Homology	CDS	1897056	1897514	.	-	0	ID=cds-WP_000424181.1;Parent=gene-PHA55_RS09080;Dbxref=Genbank:WP_000424181.1;Name=WP_000424181.1;Ontology_term=GO:0006007,GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=glucose catabolic process|0006007||IEA,methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415483.2;locus_tag=PHA55_RS09080;product=methylglyoxal synthase;protein_id=WP_000424181.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1897610	1898272	.	-	.	ID=gene-PHA55_RS09085;Name=yccT;gbkey=Gene;gene=yccT;gene_biotype=protein_coding;locus_tag=PHA55_RS09085;old_locus_tag=PHA55_09080
NZ_CP116044.1	Protein Homology	CDS	1897610	1898272	.	-	0	ID=cds-WP_000847791.1;Parent=gene-PHA55_RS09085;Dbxref=Genbank:WP_000847791.1;Name=WP_000847791.1;gbkey=CDS;gene=yccT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309075.1;locus_tag=PHA55_RS09085;product=DUF2057 family protein;protein_id=WP_000847791.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1898445	1898858	.	+	.	ID=gene-PHA55_RS09090;Name=yccU;gbkey=Gene;gene=yccU;gene_biotype=protein_coding;locus_tag=PHA55_RS09090;old_locus_tag=PHA55_09085
NZ_CP116044.1	Protein Homology	CDS	1898445	1898858	.	+	0	ID=cds-WP_000665217.1;Parent=gene-PHA55_RS09090;Dbxref=Genbank:WP_000665217.1;Name=WP_000665217.1;gbkey=CDS;gene=yccU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309076.1;locus_tag=PHA55_RS09090;product=CoA-binding protein;protein_id=WP_000665217.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1898903	1899220	.	-	.	ID=gene-PHA55_RS09095;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=PHA55_RS09095;old_locus_tag=PHA55_09090
NZ_CP116044.1	Protein Homology	CDS	1898903	1899220	.	-	0	ID=cds-WP_001295356.1;Parent=gene-PHA55_RS09095;Dbxref=Genbank:WP_001295356.1;Name=WP_001295356.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123508.1;locus_tag=PHA55_RS09095;product=heat shock protein HspQ;protein_id=WP_001295356.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1899278	1900468	.	-	.	ID=gene-PHA55_RS09100;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=PHA55_RS09100;old_locus_tag=PHA55_09095
NZ_CP116044.1	Protein Homology	CDS	1899278	1900468	.	-	0	ID=cds-WP_000116288.1;Parent=gene-PHA55_RS09100;Dbxref=Genbank:WP_000116288.1;Name=WP_000116288.1;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415487.4;locus_tag=PHA55_RS09100;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=WP_000116288.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1900563	1900841	.	+	.	ID=gene-PHA55_RS09105;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=PHA55_RS09105;old_locus_tag=PHA55_09100
NZ_CP116044.1	Protein Homology	CDS	1900563	1900841	.	+	0	ID=cds-WP_000048243.1;Parent=gene-PHA55_RS09105;Dbxref=Genbank:WP_000048243.1;Name=WP_000048243.1;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309079.1;locus_tag=PHA55_RS09105;product=acylphosphatase;protein_id=WP_000048243.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1900838	1901167	.	-	.	ID=gene-PHA55_RS09110;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=PHA55_RS09110;old_locus_tag=PHA55_09105
NZ_CP116044.1	Protein Homology	CDS	1900838	1901167	.	-	0	ID=cds-WP_000904442.1;Parent=gene-PHA55_RS09110;Dbxref=Genbank:WP_000904442.1;Name=WP_000904442.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309080.2;locus_tag=PHA55_RS09110;product=sulfurtransferase TusE;protein_id=WP_000904442.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1901258	1901917	.	-	.	ID=gene-PHA55_RS09115;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=PHA55_RS09115;old_locus_tag=PHA55_09110
NZ_CP116044.1	Protein Homology	CDS	1901258	1901917	.	-	0	ID=cds-WP_000375136.1;Parent=gene-PHA55_RS09115;Dbxref=Genbank:WP_000375136.1;Name=WP_000375136.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375124.1;locus_tag=PHA55_RS09115;product=FtsH protease modulator YccA;protein_id=WP_000375136.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1902124	1902211	.	-	.	ID=gene-PHA55_RS09120;Name=PHA55_RS09120;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS09120;old_locus_tag=PHA55_09115
NZ_CP116044.1	tRNAscan-SE	tRNA	1902124	1902211	.	-	.	ID=rna-PHA55_RS09120;Parent=gene-PHA55_RS09120;anticodon=(pos:complement(1902175..1902177));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS09120;product=tRNA-Ser
NZ_CP116044.1	tRNAscan-SE	exon	1902124	1902211	.	-	.	ID=exon-PHA55_RS09120-1;Parent=rna-PHA55_RS09120;anticodon=(pos:complement(1902175..1902177));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS09120;product=tRNA-Ser
NZ_CP116044.1	RefSeq	gene	1902638	1903756	.	+	.	ID=gene-PHA55_RS09125;Name=hyaA;gbkey=Gene;gene=hyaA;gene_biotype=protein_coding;locus_tag=PHA55_RS09125;old_locus_tag=PHA55_09120
NZ_CP116044.1	Protein Homology	CDS	1902638	1903756	.	+	0	ID=cds-WP_001058323.1;Parent=gene-PHA55_RS09125;Dbxref=Genbank:WP_001058323.1;Name=WP_001058323.1;gbkey=CDS;gene=hyaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415491.1;locus_tag=PHA55_RS09125;product=hydrogenase 1 small subunit;protein_id=WP_001058323.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1903753	1905546	.	+	.	ID=gene-PHA55_RS09130;Name=hyaB;gbkey=Gene;gene=hyaB;gene_biotype=protein_coding;locus_tag=PHA55_RS09130;old_locus_tag=PHA55_09125
NZ_CP116044.1	Protein Homology	CDS	1903753	1905546	.	+	0	ID=cds-WP_000107384.1;Parent=gene-PHA55_RS09130;Dbxref=Genbank:WP_000107384.1;Name=WP_000107384.1;gbkey=CDS;gene=hyaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415492.1;locus_tag=PHA55_RS09130;product=Ni/Fe-hydrogenase large subunit;protein_id=WP_000107384.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1905565	1906272	.	+	.	ID=gene-PHA55_RS09135;Name=hyaC;gbkey=Gene;gene=hyaC;gene_biotype=protein_coding;locus_tag=PHA55_RS09135;old_locus_tag=PHA55_09130
NZ_CP116044.1	Protein Homology	CDS	1905565	1906272	.	+	0	ID=cds-WP_001186424.1;Parent=gene-PHA55_RS09135;Dbxref=Genbank:WP_001186424.1;Name=WP_001186424.1;gbkey=CDS;gene=hyaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309157.1;locus_tag=PHA55_RS09135;product=Ni/Fe-hydrogenase b-type cytochrome subunit;protein_id=WP_001186424.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1906269	1906856	.	+	.	ID=gene-PHA55_RS09140;Name=hyaD;gbkey=Gene;gene=hyaD;gene_biotype=protein_coding;locus_tag=PHA55_RS09140;old_locus_tag=PHA55_09135
NZ_CP116044.1	Protein Homology	CDS	1906269	1906856	.	+	0	ID=cds-WP_000003663.1;Parent=gene-PHA55_RS09140;Dbxref=Genbank:WP_000003663.1;Name=WP_000003663.1;gbkey=CDS;gene=hyaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309158.1;locus_tag=PHA55_RS09140;product=hydrogenase 1 maturation protease;protein_id=WP_000003663.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1906853	1907251	.	+	.	ID=gene-PHA55_RS09145;Name=hyaE;gbkey=Gene;gene=hyaE;gene_biotype=protein_coding;locus_tag=PHA55_RS09145;old_locus_tag=PHA55_09140
NZ_CP116044.1	Protein Homology	CDS	1906853	1907251	.	+	0	ID=cds-WP_000063978.1;Parent=gene-PHA55_RS09145;Dbxref=Genbank:WP_000063978.1;Name=WP_000063978.1;gbkey=CDS;gene=hyaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415495.1;locus_tag=PHA55_RS09145;product=hydrogenase-1 operon protein HyaE;protein_id=WP_000063978.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1907248	1908105	.	+	.	ID=gene-PHA55_RS09150;Name=hyaF;gbkey=Gene;gene=hyaF;gene_biotype=protein_coding;locus_tag=PHA55_RS09150;old_locus_tag=PHA55_09145
NZ_CP116044.1	Protein Homology	CDS	1907248	1908105	.	+	0	ID=cds-WP_001462379.1;Parent=gene-PHA55_RS09150;Dbxref=Genbank:WP_001462379.1;Name=WP_001462379.1;gbkey=CDS;gene=hyaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309160.1;locus_tag=PHA55_RS09150;product=hydrogenase expression/formation protein;protein_id=WP_001462379.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1908239	1909783	.	+	.	ID=gene-PHA55_RS09155;Name=appC;gbkey=Gene;gene=appC;gene_biotype=protein_coding;locus_tag=PHA55_RS09155;old_locus_tag=PHA55_09150
NZ_CP116044.1	Protein Homology	CDS	1908239	1909783	.	+	0	ID=cds-WP_000263563.1;Parent=gene-PHA55_RS09155;Dbxref=Genbank:WP_000263563.1;Name=WP_000263563.1;gbkey=CDS;gene=appC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706901.2;locus_tag=PHA55_RS09155;product=cytochrome bd-II oxidase subunit 1;protein_id=WP_000263563.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1909795	1910931	.	+	.	ID=gene-PHA55_RS09160;Name=appB;gbkey=Gene;gene=appB;gene_biotype=protein_coding;locus_tag=PHA55_RS09160;old_locus_tag=PHA55_09155
NZ_CP116044.1	Protein Homology	CDS	1909795	1910931	.	+	0	ID=cds-WP_000460803.1;Parent=gene-PHA55_RS09160;Dbxref=Genbank:WP_000460803.1;Name=WP_000460803.1;gbkey=CDS;gene=appB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415498.1;locus_tag=PHA55_RS09160;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000460803.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1910944	1911036	.	+	.	ID=gene-PHA55_RS09165;Name=cbdX;gbkey=Gene;gene=cbdX;gene_biotype=protein_coding;locus_tag=PHA55_RS09165;old_locus_tag=PHA55_09160
NZ_CP116044.1	Protein Homology	CDS	1910944	1911036	.	+	0	ID=cds-WP_000270305.1;Parent=gene-PHA55_RS09165;Dbxref=Genbank:WP_000270305.1;Name=WP_000270305.1;gbkey=CDS;gene=cbdX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165313.1;locus_tag=PHA55_RS09165;product=cytochrome bd-II oxidase subunit CbdX;protein_id=WP_000270305.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1911116	1912414	.	+	.	ID=gene-PHA55_RS09170;Name=appA;gbkey=Gene;gene=appA;gene_biotype=protein_coding;locus_tag=PHA55_RS09170;old_locus_tag=PHA55_09165
NZ_CP116044.1	Protein Homology	CDS	1911116	1912414	.	+	0	ID=cds-WP_001297112.1;Parent=gene-PHA55_RS09170;Dbxref=Genbank:WP_001297112.1;Name=WP_001297112.1;gbkey=CDS;gene=appA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415500.1;locus_tag=PHA55_RS09170;product=bifunctional acid phosphatase/4-phytase;protein_id=WP_001297112.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1912529	1914709	.	-	.	ID=gene-PHA55_RS09175;Name=etk;gbkey=Gene;gene=etk;gene_biotype=protein_coding;locus_tag=PHA55_RS09175;old_locus_tag=PHA55_09170
NZ_CP116044.1	Protein Homology	CDS	1912529	1914709	.	-	0	ID=cds-WP_000208653.1;Parent=gene-PHA55_RS09175;Dbxref=Genbank:WP_000208653.1;Name=WP_000208653.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=etk;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415501.1;locus_tag=PHA55_RS09175;product=tyrosine-protein kinase;protein_id=WP_000208653.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1914729	1915175	.	-	.	ID=gene-PHA55_RS09180;Name=etp;gbkey=Gene;gene=etp;gene_biotype=protein_coding;gene_synonym=yccY;locus_tag=PHA55_RS09180;old_locus_tag=PHA55_09175
NZ_CP116044.1	Protein Homology	CDS	1914729	1915175	.	-	0	ID=cds-WP_000057871.1;Parent=gene-PHA55_RS09180;Dbxref=Genbank:WP_000057871.1;Name=WP_000057871.1;gbkey=CDS;gene=etp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309165.2;locus_tag=PHA55_RS09180;product=protein-tyrosine-phosphatase Etp;protein_id=WP_000057871.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1915163	1916302	.	-	.	ID=gene-PHA55_RS09185;Name=gfcE;gbkey=Gene;gene=gfcE;gene_biotype=protein_coding;locus_tag=PHA55_RS09185;old_locus_tag=PHA55_09180
NZ_CP116044.1	Protein Homology	CDS	1915163	1916302	.	-	0	ID=cds-WP_001295357.1;Parent=gene-PHA55_RS09185;Dbxref=Genbank:WP_001295357.1;Name=WP_001295357.1;gbkey=CDS;gene=gfcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309166.1;locus_tag=PHA55_RS09185;product=polysaccharide export protein;protein_id=WP_001295357.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1916348	1918444	.	-	.	ID=gene-PHA55_RS09190;Name=gfcD;gbkey=Gene;gene=gfcD;gene_biotype=protein_coding;locus_tag=PHA55_RS09190;old_locus_tag=PHA55_09185
NZ_CP116044.1	Protein Homology	CDS	1916348	1918444	.	-	0	ID=cds-WP_000742348.1;Parent=gene-PHA55_RS09190;Dbxref=Genbank:WP_000742348.1;Name=WP_000742348.1;gbkey=CDS;gene=gfcD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309167.1;locus_tag=PHA55_RS09190;product=YjbH domain-containing protein;protein_id=WP_000742348.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1918444	1919190	.	-	.	ID=gene-PHA55_RS09195;Name=gfcC;gbkey=Gene;gene=gfcC;gene_biotype=protein_coding;locus_tag=PHA55_RS09195;old_locus_tag=PHA55_09190
NZ_CP116044.1	Protein Homology	CDS	1918444	1919190	.	-	0	ID=cds-WP_001038079.1;Parent=gene-PHA55_RS09195;Dbxref=Genbank:WP_001038079.1;Name=WP_001038079.1;gbkey=CDS;gene=gfcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415505.1;locus_tag=PHA55_RS09195;product=capsule biosynthesis GfcC family protein;protein_id=WP_001038079.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1919187	1919831	.	-	.	ID=gene-PHA55_RS09200;Name=gfcB;gbkey=Gene;gene=gfcB;gene_biotype=protein_coding;locus_tag=PHA55_RS09200;old_locus_tag=PHA55_09195
NZ_CP116044.1	Protein Homology	CDS	1919187	1919831	.	-	0	ID=cds-WP_001247610.1;Parent=gene-PHA55_RS09200;Dbxref=Genbank:WP_001247610.1;Name=WP_001247610.1;gbkey=CDS;gene=gfcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415506.1;locus_tag=PHA55_RS09200;product=lipoprotein GfcB;protein_id=WP_001247610.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1919938	1920243	.	-	.	ID=gene-PHA55_RS09205;Name=gfcA;gbkey=Gene;gene=gfcA;gene_biotype=protein_coding;locus_tag=PHA55_RS09205;old_locus_tag=PHA55_09200
NZ_CP116044.1	Protein Homology	CDS	1919938	1920243	.	-	0	ID=cds-WP_001295358.1;Parent=gene-PHA55_RS09205;Dbxref=Genbank:WP_001295358.1;Name=WP_001295358.1;gbkey=CDS;gene=gfcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415507.2;locus_tag=PHA55_RS09205;product=threonine-rich inner membrane protein GfcA;protein_id=WP_001295358.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1920685	1920897	.	-	.	ID=gene-PHA55_RS09210;Name=cspH;gbkey=Gene;gene=cspH;gene_biotype=protein_coding;locus_tag=PHA55_RS09210;old_locus_tag=PHA55_09205
NZ_CP116044.1	Protein Homology	CDS	1920685	1920897	.	-	0	ID=cds-WP_000087763.1;Parent=gene-PHA55_RS09210;Dbxref=Genbank:WP_000087763.1;Name=WP_000087763.1;gbkey=CDS;gene=cspH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415509.1;locus_tag=PHA55_RS09210;product=cold shock-like protein CspH;protein_id=WP_000087763.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1921183	1921395	.	+	.	ID=gene-PHA55_RS09215;Name=cspG;gbkey=Gene;gene=cspG;gene_biotype=protein_coding;locus_tag=PHA55_RS09215;old_locus_tag=PHA55_09210
NZ_CP116044.1	Protein Homology	CDS	1921183	1921395	.	+	0	ID=cds-WP_000066490.1;Parent=gene-PHA55_RS09215;Dbxref=Genbank:WP_000066490.1;Name=WP_000066490.1;gbkey=CDS;gene=cspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309172.1;locus_tag=PHA55_RS09215;product=cold shock protein CspG;protein_id=WP_000066490.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1921406	1921594	.	+	.	ID=gene-PHA55_RS09220;Name=ymcF;gbkey=Gene;gene=ymcF;gene_biotype=protein_coding;locus_tag=PHA55_RS09220;old_locus_tag=PHA55_09215
NZ_CP116044.1	Protein Homology	CDS	1921406	1921594	.	+	0	ID=cds-WP_071524630.1;Parent=gene-PHA55_RS09220;Dbxref=Genbank:WP_071524630.1;Name=WP_071524630.1;gbkey=CDS;gene=ymcF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518761.1;locus_tag=PHA55_RS09220;product=cold-shock protein;protein_id=WP_071524630.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1921569	1921799	.	+	.	ID=gene-PHA55_RS09225;Name=ymcE;gbkey=Gene;gene=ymcE;gene_biotype=protein_coding;locus_tag=PHA55_RS09225;old_locus_tag=PHA55_09220
NZ_CP116044.1	Protein Homology	CDS	1921569	1921799	.	+	0	ID=cds-WP_001316982.1;Parent=gene-PHA55_RS09225;Dbxref=Genbank:WP_001316982.1;Name=WP_001316982.1;gbkey=CDS;gene=ymcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415511.1;locus_tag=PHA55_RS09225;product=protein YmcE;protein_id=WP_001316982.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1921789	1921962	.	+	.	ID=gene-PHA55_RS09230;Name=gnsA;gbkey=Gene;gene=gnsA;gene_biotype=protein_coding;locus_tag=PHA55_RS09230;old_locus_tag=PHA55_09225
NZ_CP116044.1	Protein Homology	CDS	1921789	1921962	.	+	0	ID=cds-WP_001019197.1;Parent=gene-PHA55_RS09230;Dbxref=Genbank:WP_001019197.1;Name=WP_001019197.1;gbkey=CDS;gene=gnsA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588446.1;locus_tag=PHA55_RS09230;product=addiction module toxin%2C GnsA/GnsB family;protein_id=WP_001019197.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1922010	1923083	.	-	.	ID=gene-PHA55_RS09235;Name=yccM;gbkey=Gene;gene=yccM;gene_biotype=protein_coding;locus_tag=PHA55_RS09235;old_locus_tag=PHA55_09230
NZ_CP116044.1	Protein Homology	CDS	1922010	1923083	.	-	0	ID=cds-WP_000829669.1;Parent=gene-PHA55_RS09235;Dbxref=Genbank:WP_000829669.1;Name=WP_000829669.1;gbkey=CDS;gene=yccM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415512.1;locus_tag=PHA55_RS09235;product=4Fe-4S binding protein;protein_id=WP_000829669.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1923155	1925899	.	-	.	ID=gene-PHA55_RS09240;Name=torS;gbkey=Gene;gene=torS;gene_biotype=protein_coding;locus_tag=PHA55_RS09240;old_locus_tag=PHA55_09235
NZ_CP116044.1	Protein Homology	CDS	1923155	1925899	.	-	0	ID=cds-WP_160445575.1;Parent=gene-PHA55_RS09240;Dbxref=Genbank:WP_160445575.1;Name=WP_160445575.1;gbkey=CDS;gene=torS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415513.2;locus_tag=PHA55_RS09240;product=TMAO reductase system sensor histidine kinase/response regulator TorS;protein_id=WP_160445575.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1925982	1927010	.	+	.	ID=gene-PHA55_RS09245;Name=torT;gbkey=Gene;gene=torT;gene_biotype=protein_coding;locus_tag=PHA55_RS09245;old_locus_tag=PHA55_09240
NZ_CP116044.1	Protein Homology	CDS	1925982	1927010	.	+	0	ID=cds-WP_001264959.1;Parent=gene-PHA55_RS09245;Dbxref=Genbank:WP_001264959.1;Name=WP_001264959.1;gbkey=CDS;gene=torT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415514.1;locus_tag=PHA55_RS09245;product=TMAO reductase system periplasmic protein TorT;protein_id=WP_001264959.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1926983	1927675	.	-	.	ID=gene-PHA55_RS09250;Name=torR;gbkey=Gene;gene=torR;gene_biotype=protein_coding;locus_tag=PHA55_RS09250;old_locus_tag=PHA55_09245
NZ_CP116044.1	Protein Homology	CDS	1926983	1927675	.	-	0	ID=cds-WP_001120112.1;Parent=gene-PHA55_RS09250;Dbxref=Genbank:WP_001120112.1;Name=WP_001120112.1;gbkey=CDS;gene=torR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309177.1;locus_tag=PHA55_RS09250;product=two-component system response regulator TorR;protein_id=WP_001120112.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1927805	1928977	.	+	.	ID=gene-PHA55_RS09255;Name=torC;gbkey=Gene;gene=torC;gene_biotype=protein_coding;locus_tag=PHA55_RS09255;old_locus_tag=PHA55_09250
NZ_CP116044.1	Protein Homology	CDS	1927805	1928977	.	+	0	ID=cds-WP_001230242.1;Parent=gene-PHA55_RS09255;Dbxref=Genbank:WP_001230242.1;Name=WP_001230242.1;Ontology_term=GO:0009055,GO:0020037,GO:0016020;gbkey=CDS;gene=torC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415516.1;locus_tag=PHA55_RS09255;product=pentaheme c-type cytochrome TorC;protein_id=WP_001230242.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1928977	1931523	.	+	.	ID=gene-PHA55_RS09260;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=PHA55_RS09260;old_locus_tag=PHA55_09255
NZ_CP116044.1	Protein Homology	CDS	1928977	1931523	.	+	0	ID=cds-WP_001062102.1;Parent=gene-PHA55_RS09260;Dbxref=Genbank:WP_001062102.1;Name=WP_001062102.1;Ontology_term=GO:0030151,GO:0043546,GO:0050626,GO:0042597;gbkey=CDS;gene=torA;go_component=periplasmic space|0042597||IEA;go_function=molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,trimethylamine-N-oxide reductase (cytochrome c) activity|0050626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415517.1;locus_tag=PHA55_RS09260;product=trimethylamine-N-oxide reductase TorA;protein_id=WP_001062102.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1931520	1932119	.	+	.	ID=gene-PHA55_RS09265;Name=torD;gbkey=Gene;gene=torD;gene_biotype=protein_coding;locus_tag=PHA55_RS09265;old_locus_tag=PHA55_09260
NZ_CP116044.1	Protein Homology	CDS	1931520	1932119	.	+	0	ID=cds-WP_000209854.1;Parent=gene-PHA55_RS09265;Dbxref=Genbank:WP_000209854.1;Name=WP_000209854.1;Ontology_term=GO:0051259;gbkey=CDS;gene=torD;go_process=protein complex oligomerization|0051259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415518.1;locus_tag=PHA55_RS09265;product=molecular chaperone TorD;protein_id=WP_000209854.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1932212	1932517	.	-	.	ID=gene-PHA55_RS09270;Name=cbpM;gbkey=Gene;gene=cbpM;gene_biotype=protein_coding;locus_tag=PHA55_RS09270;old_locus_tag=PHA55_09265
NZ_CP116044.1	Protein Homology	CDS	1932212	1932517	.	-	0	ID=cds-WP_000024561.1;Parent=gene-PHA55_RS09270;Dbxref=Genbank:WP_000024561.1;Name=WP_000024561.1;gbkey=CDS;gene=cbpM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309181.1;locus_tag=PHA55_RS09270;product=chaperone modulator CbpM;protein_id=WP_000024561.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1932517	1933437	.	-	.	ID=gene-PHA55_RS09275;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=PHA55_RS09275;old_locus_tag=PHA55_09270
NZ_CP116044.1	Protein Homology	CDS	1932517	1933437	.	-	0	ID=cds-WP_000420629.1;Parent=gene-PHA55_RS09275;Dbxref=Genbank:WP_000420629.1;Name=WP_000420629.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=cbpA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415520.1;locus_tag=PHA55_RS09275;product=curved DNA-binding protein;protein_id=WP_000420629.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	1933697	1934952	.	+	.	ID=gene-PHA55_RS09280;Name=yccE;gbkey=Gene;gene=yccE;gene_biotype=pseudogene;locus_tag=PHA55_RS09280;old_locus_tag=PHA55_09275;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	1933697	1934952	.	+	0	ID=cds-PHA55_RS09280;Parent=gene-PHA55_RS09280;Note=frameshifted;gbkey=CDS;gene=yccE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415521.1;locus_tag=PHA55_RS09280;product=YccE family protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	1935245	1936486	.	+	.	ID=gene-PHA55_RS09285;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=PHA55_RS09285;old_locus_tag=PHA55_09280
NZ_CP116044.1	Protein Homology	CDS	1935245	1936486	.	+	0	ID=cds-WP_001044282.1;Parent=gene-PHA55_RS09285;Dbxref=Genbank:WP_001044282.1;Name=WP_001044282.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415522.1;locus_tag=PHA55_RS09285;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=WP_001044282.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1936524	1936751	.	-	.	ID=gene-PHA55_RS09290;Name=yccJ;gbkey=Gene;gene=yccJ;gene_biotype=protein_coding;locus_tag=PHA55_RS09290;old_locus_tag=PHA55_09285
NZ_CP116044.1	Protein Homology	CDS	1936524	1936751	.	-	0	ID=cds-WP_001143120.1;Parent=gene-PHA55_RS09290;Dbxref=Genbank:WP_001143120.1;Name=WP_001143120.1;gbkey=CDS;gene=yccJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=PHA55_RS09290;product=YccJ family protein;protein_id=WP_001143120.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1936772	1937368	.	-	.	ID=gene-PHA55_RS09295;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=PHA55_RS09295;old_locus_tag=PHA55_09290
NZ_CP116044.1	Protein Homology	CDS	1936772	1937368	.	-	0	ID=cds-WP_001151437.1;Parent=gene-PHA55_RS09295;Dbxref=Genbank:WP_001151437.1;Name=WP_001151437.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415524.1;locus_tag=PHA55_RS09295;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_001151437.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1937741	1937914	.	+	.	ID=gene-PHA55_RS09300;Name=ymdF;gbkey=Gene;gene=ymdF;gene_biotype=protein_coding;locus_tag=PHA55_RS09300;old_locus_tag=PHA55_09295
NZ_CP116044.1	Protein Homology	CDS	1937741	1937914	.	+	0	ID=cds-WP_001273658.1;Parent=gene-PHA55_RS09300;Dbxref=Genbank:WP_001273658.1;Name=WP_001273658.1;gbkey=CDS;gene=ymdF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415525.2;locus_tag=PHA55_RS09300;product=general stress protein;protein_id=WP_001273658.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1937997	1939325	.	-	.	ID=gene-PHA55_RS09305;Name=rutG;gbkey=Gene;gene=rutG;gene_biotype=protein_coding;locus_tag=PHA55_RS09305;old_locus_tag=PHA55_09300
NZ_CP116044.1	Protein Homology	CDS	1937997	1939325	.	-	0	ID=cds-WP_001240629.1;Parent=gene-PHA55_RS09305;Dbxref=Genbank:WP_001240629.1;Name=WP_001240629.1;Ontology_term=GO:0006864,GO:0015218,GO:0016020;gbkey=CDS;gene=rutG;go_component=membrane|0016020||IEA;go_function=pyrimidine nucleotide transmembrane transporter activity|0015218||IEA;go_process=pyrimidine nucleotide transport|0006864||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415526.4;locus_tag=PHA55_RS09305;product=pyrimidine utilization transport protein G;protein_id=WP_001240629.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1939346	1939840	.	-	.	ID=gene-PHA55_RS09310;Name=rutF;gbkey=Gene;gene=rutF;gene_biotype=protein_coding;locus_tag=PHA55_RS09310;old_locus_tag=PHA55_09305
NZ_CP116044.1	Protein Homology	CDS	1939346	1939840	.	-	0	ID=cds-WP_001028095.1;Parent=gene-PHA55_RS09310;Dbxref=Genbank:WP_001028095.1;Name=WP_001028095.1;gbkey=CDS;gene=rutF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309280.2;locus_tag=PHA55_RS09310;product=pyrimidine utilization flavin reductase protein F;protein_id=WP_001028095.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1939851	1940441	.	-	.	ID=gene-PHA55_RS09315;Name=rutE;gbkey=Gene;gene=rutE;gene_biotype=protein_coding;locus_tag=PHA55_RS09315;old_locus_tag=PHA55_09310
NZ_CP116044.1	Protein Homology	CDS	1939851	1940441	.	-	0	ID=cds-WP_001001196.1;Parent=gene-PHA55_RS09315;Dbxref=Genbank:WP_001001196.1;Name=WP_001001196.1;Ontology_term=GO:0016491;gbkey=CDS;gene=rutE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706930.1;locus_tag=PHA55_RS09315;product=malonic semialdehyde reductase;protein_id=WP_001001196.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1940451	1941251	.	-	.	ID=gene-PHA55_RS09320;Name=rutD;gbkey=Gene;gene=rutD;gene_biotype=protein_coding;locus_tag=PHA55_RS09320;old_locus_tag=PHA55_09315
NZ_CP116044.1	Protein Homology	CDS	1940451	1941251	.	-	0	ID=cds-WP_001307099.1;Parent=gene-PHA55_RS09320;Dbxref=Genbank:WP_001307099.1;Name=WP_001307099.1;Ontology_term=GO:0006212,GO:0016811;gbkey=CDS;gene=rutD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415529.1;locus_tag=PHA55_RS09320;product=pyrimidine utilization protein D;protein_id=WP_001307099.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1941259	1941645	.	-	.	ID=gene-PHA55_RS09325;Name=rutC;gbkey=Gene;gene=rutC;gene_biotype=protein_coding;locus_tag=PHA55_RS09325;old_locus_tag=PHA55_09320
NZ_CP116044.1	Protein Homology	CDS	1941259	1941645	.	-	0	ID=cds-WP_001126777.1;Parent=gene-PHA55_RS09325;Dbxref=Genbank:WP_001126777.1;Name=WP_001126777.1;gbkey=CDS;gene=rutC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415530.1;locus_tag=PHA55_RS09325;product=3-aminoacrylate deaminase;protein_id=WP_001126777.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1941657	1942349	.	-	.	ID=gene-PHA55_RS09330;Name=rutB;gbkey=Gene;gene=rutB;gene_biotype=protein_coding;locus_tag=PHA55_RS09330;old_locus_tag=PHA55_09325
NZ_CP116044.1	Protein Homology	CDS	1941657	1942349	.	-	0	ID=cds-WP_001307708.1;Parent=gene-PHA55_RS09330;Dbxref=Genbank:WP_001307708.1;Name=WP_001307708.1;gbkey=CDS;gene=rutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415531.2;locus_tag=PHA55_RS09330;product=peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB;protein_id=WP_001307708.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1942349	1943440	.	-	.	ID=gene-PHA55_RS09335;Name=rutA;gbkey=Gene;gene=rutA;gene_biotype=protein_coding;locus_tag=PHA55_RS09335;old_locus_tag=PHA55_09330
NZ_CP116044.1	Protein Homology	CDS	1942349	1943440	.	-	0	ID=cds-WP_001297176.1;Parent=gene-PHA55_RS09335;Dbxref=Genbank:WP_001297176.1;Name=WP_001297176.1;Ontology_term=GO:0008150,GO:0010181,GO:0016491;gbkey=CDS;gene=rutA;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309285.4;locus_tag=PHA55_RS09335;product=pyrimidine utilization protein A;protein_id=WP_001297176.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1943728	1944366	.	+	.	ID=gene-PHA55_RS09340;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=protein_coding;locus_tag=PHA55_RS09340;old_locus_tag=PHA55_09335
NZ_CP116044.1	Protein Homology	CDS	1943728	1944366	.	+	0	ID=cds-WP_000191700.1;Parent=gene-PHA55_RS09340;Dbxref=Genbank:WP_000191700.1;Name=WP_000191700.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;gene=rutR;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415533.1;locus_tag=PHA55_RS09340;product=HTH-type transcriptional regulator RutR;protein_id=WP_000191700.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1944406	1948368	.	-	.	ID=gene-PHA55_RS09345;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=PHA55_RS09345;old_locus_tag=PHA55_09340
NZ_CP116044.1	Protein Homology	CDS	1944406	1948368	.	-	0	ID=cds-WP_001307103.1;Parent=gene-PHA55_RS09345;Dbxref=Genbank:WP_001307103.1;Name=WP_001307103.1;Ontology_term=GO:0006355,GO:0006561,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309287.1;locus_tag=PHA55_RS09345;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_001307103.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1948423	1948632	.	+	.	ID=gene-PHA55_RS09350;Name=PHA55_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09350;old_locus_tag=PHA55_09345
NZ_CP116044.1	GeneMarkS-2+	CDS	1948423	1948632	.	+	0	ID=cds-WP_000979516.1;Parent=gene-PHA55_RS09350;Dbxref=Genbank:WP_000979516.1;Name=WP_000979516.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA55_RS09350;product=hypothetical protein;protein_id=WP_000979516.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1948791	1950299	.	+	.	ID=gene-PHA55_RS09355;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=PHA55_RS09355;old_locus_tag=PHA55_09350
NZ_CP116044.1	Protein Homology	CDS	1948791	1950299	.	+	0	ID=cds-WP_001018486.1;Parent=gene-PHA55_RS09355;Dbxref=Genbank:WP_001018486.1;Name=WP_001018486.1;Ontology_term=GO:0006814,GO:0015824,GO:0055085,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415535.1;locus_tag=PHA55_RS09355;product=sodium/proline symporter PutP;protein_id=WP_001018486.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1950841	1951671	.	+	.	ID=gene-PHA55_RS09360;Name=PHA55_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09360;old_locus_tag=PHA55_09355
NZ_CP116044.1	Protein Homology	CDS	1950841	1951671	.	+	0	ID=cds-WP_000497941.1;Parent=gene-PHA55_RS09360;Dbxref=Genbank:WP_000497941.1;Name=WP_000497941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309290.1;locus_tag=PHA55_RS09360;product=FTR1 family protein;protein_id=WP_000497941.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1951729	1952856	.	+	.	ID=gene-PHA55_RS09365;Name=efeO;gbkey=Gene;gene=efeO;gene_biotype=protein_coding;locus_tag=PHA55_RS09365;old_locus_tag=PHA55_09360
NZ_CP116044.1	Protein Homology	CDS	1951729	1952856	.	+	0	ID=cds-WP_000154411.1;Parent=gene-PHA55_RS09365;Dbxref=Genbank:WP_000154411.1;Name=WP_000154411.1;gbkey=CDS;gene=efeO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309291.1;locus_tag=PHA55_RS09365;product=iron uptake system protein EfeO;protein_id=WP_000154411.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1952862	1954133	.	+	.	ID=gene-PHA55_RS09370;Name=efeB;gbkey=Gene;gene=efeB;gene_biotype=protein_coding;locus_tag=PHA55_RS09370;old_locus_tag=PHA55_09365
NZ_CP116044.1	Protein Homology	CDS	1952862	1954133	.	+	0	ID=cds-WP_001199180.1;Parent=gene-PHA55_RS09370;Dbxref=Genbank:WP_001199180.1;Name=WP_001199180.1;Ontology_term=GO:0033212,GO:0004601,GO:0020037;gbkey=CDS;gene=efeB;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=iron import into cell|0033212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309292.1;locus_tag=PHA55_RS09370;product=iron uptake transporter deferrochelatase/peroxidase subunit;protein_id=WP_001199180.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1954752	1955540	.	+	.	ID=gene-PHA55_RS09375;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=PHA55_RS09375;old_locus_tag=PHA55_09370
NZ_CP116044.1	Protein Homology	CDS	1954752	1955540	.	+	0	ID=cds-WP_000533522.1;Parent=gene-PHA55_RS09375;Dbxref=Genbank:WP_000533522.1;Name=WP_000533522.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741490.1;locus_tag=PHA55_RS09375;product=phosphate starvation-inducible protein PhoH;protein_id=WP_000533522.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1955590	1956003	.	-	.	ID=gene-PHA55_RS09380;Name=pgaD;gbkey=Gene;gene=pgaD;gene_biotype=protein_coding;locus_tag=PHA55_RS09380;old_locus_tag=PHA55_09375
NZ_CP116044.1	Protein Homology	CDS	1955590	1956003	.	-	0	ID=cds-WP_001061095.1;Parent=gene-PHA55_RS09380;Dbxref=Genbank:WP_001061095.1;Name=WP_001061095.1;gbkey=CDS;gene=pgaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309294.1;locus_tag=PHA55_RS09380;product=poly-beta-1%2C6-N-acetyl-D-glucosamine biosynthesis protein PgaD;protein_id=WP_001061095.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1956005	1957330	.	-	.	ID=gene-PHA55_RS09385;Name=pgaC;gbkey=Gene;gene=pgaC;gene_biotype=protein_coding;locus_tag=PHA55_RS09385;old_locus_tag=PHA55_09380
NZ_CP116044.1	Protein Homology	CDS	1956005	1957330	.	-	0	ID=cds-WP_000610451.1;Parent=gene-PHA55_RS09385;Dbxref=Genbank:WP_000610451.1;Name=WP_000610451.1;Ontology_term=GO:0042710,GO:0008375;gbkey=CDS;gene=pgaC;go_function=acetylglucosaminyltransferase activity|0008375||IEA;go_process=biofilm formation|0042710||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415541.1;locus_tag=PHA55_RS09385;product=poly-beta-1%2C6-N-acetyl-D-glucosamine synthase;protein_id=WP_000610451.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1957323	1959341	.	-	.	ID=gene-PHA55_RS09390;Name=pgaB;gbkey=Gene;gene=pgaB;gene_biotype=protein_coding;locus_tag=PHA55_RS09390;old_locus_tag=PHA55_09385
NZ_CP116044.1	Protein Homology	CDS	1957323	1959341	.	-	0	ID=cds-WP_000945561.1;Parent=gene-PHA55_RS09390;Dbxref=Genbank:WP_000945561.1;Name=WP_000945561.1;gbkey=CDS;gene=pgaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415542.1;locus_tag=PHA55_RS09390;product=poly-beta-1%2C6-N-acetyl-D-glucosamine N-deacetylase PgaB;protein_id=WP_000945561.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1959350	1961773	.	-	.	ID=gene-PHA55_RS09395;Name=pgaA;gbkey=Gene;gene=pgaA;gene_biotype=protein_coding;locus_tag=PHA55_RS09395;old_locus_tag=PHA55_09390
NZ_CP116044.1	Protein Homology	CDS	1959350	1961773	.	-	0	ID=cds-WP_000287458.1;Parent=gene-PHA55_RS09395;Dbxref=Genbank:WP_000287458.1;Name=WP_000287458.1;Ontology_term=GO:1901515;gbkey=CDS;gene=pgaA;go_function=poly-beta-1%2C6-N-acetyl-D-glucosamine transmembrane transporter activity|1901515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309297.1;locus_tag=PHA55_RS09395;product=poly-beta-1%2C6 N-acetyl-D-glucosamine export porin PgaA;protein_id=WP_000287458.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1962360	1963718	.	+	.	ID=gene-PHA55_RS09400;Name=dgcT;gbkey=Gene;gene=dgcT;gene_biotype=protein_coding;locus_tag=PHA55_RS09400;old_locus_tag=PHA55_09395
NZ_CP116044.1	Protein Homology	CDS	1962360	1963718	.	+	0	ID=cds-WP_000409849.1;Parent=gene-PHA55_RS09400;Dbxref=Genbank:WP_000409849.1;Name=WP_000409849.1;gbkey=CDS;gene=dgcT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309298.1;locus_tag=PHA55_RS09400;product=GGDEF domain-containing protein;protein_id=WP_000409849.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1963759	1964921	.	-	.	ID=gene-PHA55_RS09405;Name=PHA55_RS09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09405;old_locus_tag=PHA55_09400
NZ_CP116044.1	Protein Homology	CDS	1964660	1964921	.	-	0	ID=cds-WP_085948466.1;Parent=gene-PHA55_RS09405;Dbxref=Genbank:WP_085948466.1;Name=WP_085948466.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=PHA55_RS09405;product=IS3-like element IS3 family transposase;protein_id=WP_085948466.1;transl_table=11
NZ_CP116044.1	Protein Homology	CDS	1963759	1964660	.	-	2	ID=cds-WP_085948466.1;Parent=gene-PHA55_RS09405;Dbxref=Genbank:WP_085948466.1;Name=WP_085948466.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=PHA55_RS09405;product=IS3-like element IS3 family transposase;protein_id=WP_085948466.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	1964988	1965515	.	+	.	ID=gene-PHA55_RS09410;Name=PHA55_RS09410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS09410;old_locus_tag=PHA55_09405;partial=true;pseudo=true;start_range=.,1964988
NZ_CP116044.1	Protein Homology	CDS	1964988	1965515	.	+	0	ID=cds-PHA55_RS09410;Parent=gene-PHA55_RS09410;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309324.2;locus_tag=PHA55_RS09410;partial=true;product=ACP S-malonyltransferase;pseudo=true;start_range=.,1964988;transl_table=11
NZ_CP116044.1	RefSeq	gene	1965512	1966498	.	+	.	ID=gene-PHA55_RS09415;Name=ycdU;gbkey=Gene;gene=ycdU;gene_biotype=protein_coding;locus_tag=PHA55_RS09415;old_locus_tag=PHA55_09410
NZ_CP116044.1	Protein Homology	CDS	1965512	1966498	.	+	0	ID=cds-WP_000611858.1;Parent=gene-PHA55_RS09415;Dbxref=Genbank:WP_000611858.1;Name=WP_000611858.1;gbkey=CDS;gene=ycdU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415548.1;locus_tag=PHA55_RS09415;product=protein YcdU;protein_id=WP_000611858.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1966691	1966827	.	-	.	ID=gene-PHA55_RS09420;Name=PHA55_RS09420;gbkey=Gene;gene_biotype=ncRNA;locus_tag=PHA55_RS09420;old_locus_tag=PHA55_09415
NZ_CP116044.1	cmsearch	ncRNA	1966691	1966827	.	-	.	ID=rna-PHA55_RS09420;Parent=gene-PHA55_RS09420;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS09420;product=RtT sRNA
NZ_CP116044.1	cmsearch	exon	1966691	1966827	.	-	.	ID=exon-PHA55_RS09420-1;Parent=rna-PHA55_RS09420;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS09420;product=RtT sRNA
NZ_CP116044.1	RefSeq	gene	1966872	1967008	.	-	.	ID=gene-PHA55_RS09425;Name=PHA55_RS09425;gbkey=Gene;gene_biotype=ncRNA;locus_tag=PHA55_RS09425;old_locus_tag=PHA55_09420
NZ_CP116044.1	cmsearch	ncRNA	1966872	1967008	.	-	.	ID=rna-PHA55_RS09425;Parent=gene-PHA55_RS09425;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS09425;product=RtT sRNA
NZ_CP116044.1	cmsearch	exon	1966872	1967008	.	-	.	ID=exon-PHA55_RS09425-1;Parent=rna-PHA55_RS09425;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS09425;product=RtT sRNA
NZ_CP116044.1	RefSeq	gene	1967235	1967322	.	-	.	ID=gene-PHA55_RS09430;Name=PHA55_RS09430;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS09430;old_locus_tag=PHA55_09425
NZ_CP116044.1	tRNAscan-SE	tRNA	1967235	1967322	.	-	.	ID=rna-PHA55_RS09430;Parent=gene-PHA55_RS09430;anticodon=(pos:complement(1967286..1967288));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS09430;product=tRNA-Ser
NZ_CP116044.1	tRNAscan-SE	exon	1967235	1967322	.	-	.	ID=exon-PHA55_RS09430-1;Parent=rna-PHA55_RS09430;anticodon=(pos:complement(1967286..1967288));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS09430;product=tRNA-Ser
NZ_CP116044.1	RefSeq	gene	1967556	1968494	.	+	.	ID=gene-PHA55_RS09435;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=PHA55_RS09435;old_locus_tag=PHA55_09430
NZ_CP116044.1	Protein Homology	CDS	1967556	1968494	.	+	0	ID=cds-WP_000351317.1;Parent=gene-PHA55_RS09435;Dbxref=Genbank:WP_000351317.1;Name=WP_000351317.1;Ontology_term=GO:0016618,GO:0030267,GO:0051287;gbkey=CDS;gene=ghrA;go_function=hydroxypyruvate reductase activity|0016618||IEA,glyoxylate reductase (NADP+) activity|0030267||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415551.2;locus_tag=PHA55_RS09435;product=glyoxylate/hydroxypyruvate reductase GhrA;protein_id=WP_000351317.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	1968549	1968953	.	+	.	ID=gene-PHA55_RS09440;Name=ycdX;end_range=1968953,.;gbkey=Gene;gene=ycdX;gene_biotype=pseudogene;locus_tag=PHA55_RS09440;old_locus_tag=PHA55_09435;partial=true;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	1968549	1968953	.	+	0	ID=cds-PHA55_RS09440;Parent=gene-PHA55_RS09440;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1968953,.;gbkey=CDS;gene=ycdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309438.1;locus_tag=PHA55_RS09440;partial=true;product=zinc-binding phosphatase;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	1969028	1969384	.	-	.	ID=gene-PHA55_RS09445;Name=PHA55_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09445;old_locus_tag=PHA55_09440
NZ_CP116044.1	GeneMarkS-2+	CDS	1969028	1969384	.	-	0	ID=cds-WP_271287514.1;Parent=gene-PHA55_RS09445;Dbxref=Genbank:WP_271287514.1;Name=WP_271287514.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA55_RS09445;product=hypothetical protein;protein_id=WP_271287514.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1969427	1969990	.	-	.	ID=gene-PHA55_RS09450;Name=PHA55_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09450;old_locus_tag=PHA55_09445
NZ_CP116044.1	GeneMarkS-2+	CDS	1969427	1969990	.	-	0	ID=cds-WP_271287515.1;Parent=gene-PHA55_RS09450;Dbxref=Genbank:WP_271287515.1;Name=WP_271287515.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA55_RS09450;product=hypothetical protein;protein_id=WP_271287515.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1970403	1970951	.	+	.	ID=gene-PHA55_RS09455;Name=PHA55_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09455;old_locus_tag=PHA55_09450
NZ_CP116044.1	Protein Homology	CDS	1970403	1970951	.	+	0	ID=cds-WP_271287516.1;Parent=gene-PHA55_RS09455;Dbxref=Genbank:WP_271287516.1;Name=WP_271287516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000656991.1;locus_tag=PHA55_RS09455;product=hypothetical protein;protein_id=WP_271287516.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1971045	1971329	.	+	.	ID=gene-PHA55_RS09460;Name=PHA55_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09460;old_locus_tag=PHA55_09455
NZ_CP116044.1	Protein Homology	CDS	1971045	1971329	.	+	0	ID=cds-WP_271287517.1;Parent=gene-PHA55_RS09460;Dbxref=Genbank:WP_271287517.1;Name=WP_271287517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000190127.1;locus_tag=PHA55_RS09460;product=hypothetical protein;protein_id=WP_271287517.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1971626	1972486	.	-	.	ID=gene-PHA55_RS09465;Name=PHA55_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09465;old_locus_tag=PHA55_09460
NZ_CP116044.1	GeneMarkS-2+	CDS	1971626	1972486	.	-	0	ID=cds-WP_271287518.1;Parent=gene-PHA55_RS09465;Dbxref=Genbank:WP_271287518.1;Name=WP_271287518.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA55_RS09465;product=hypothetical protein;protein_id=WP_271287518.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1972513	1973475	.	-	.	ID=gene-PHA55_RS09470;Name=PHA55_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09470;old_locus_tag=PHA55_09465
NZ_CP116044.1	GeneMarkS-2+	CDS	1972513	1973475	.	-	0	ID=cds-WP_271287519.1;Parent=gene-PHA55_RS09470;Dbxref=Genbank:WP_271287519.1;Name=WP_271287519.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA55_RS09470;product=hypothetical protein;protein_id=WP_271287519.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1973596	1973778	.	-	.	ID=gene-PHA55_RS09475;Name=PHA55_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09475;old_locus_tag=PHA55_09470
NZ_CP116044.1	Protein Homology	CDS	1973596	1973778	.	-	0	ID=cds-WP_059257909.1;Parent=gene-PHA55_RS09475;Dbxref=Genbank:WP_059257909.1;Name=WP_059257909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113735.1;locus_tag=PHA55_RS09475;product=hypothetical protein;protein_id=WP_059257909.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1975243	1975716	.	+	.	ID=gene-PHA55_RS09480;Name=PHA55_RS09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09480;old_locus_tag=PHA55_09475
NZ_CP116044.1	Protein Homology	CDS	1975243	1975716	.	+	0	ID=cds-WP_271287520.1;Parent=gene-PHA55_RS09480;Dbxref=Genbank:WP_271287520.1;Name=WP_271287520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001015845.1;locus_tag=PHA55_RS09480;product=hypothetical protein;protein_id=WP_271287520.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1975836	1976168	.	+	.	ID=gene-PHA55_RS09485;Name=PHA55_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09485;old_locus_tag=PHA55_09480
NZ_CP116044.1	Protein Homology	CDS	1975836	1976168	.	+	0	ID=cds-WP_271287521.1;Parent=gene-PHA55_RS09485;Dbxref=Genbank:WP_271287521.1;Name=WP_271287521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000657813.1;locus_tag=PHA55_RS09485;product=hypothetical protein;protein_id=WP_271287521.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1976258	1977109	.	+	.	ID=gene-PHA55_RS09490;Name=PHA55_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09490;old_locus_tag=PHA55_09485
NZ_CP116044.1	Protein Homology	CDS	1976258	1977109	.	+	0	ID=cds-WP_271287522.1;Parent=gene-PHA55_RS09490;Dbxref=Genbank:WP_271287522.1;Name=WP_271287522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001352485.1;locus_tag=PHA55_RS09490;product=hypothetical protein;protein_id=WP_271287522.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1977412	1977639	.	-	.	ID=gene-PHA55_RS09495;Name=PHA55_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09495;old_locus_tag=PHA55_09490
NZ_CP116044.1	Protein Homology	CDS	1977412	1977639	.	-	0	ID=cds-WP_271287523.1;Parent=gene-PHA55_RS09495;Dbxref=Genbank:WP_271287523.1;Name=WP_271287523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000208371.1;locus_tag=PHA55_RS09495;product=hypothetical protein;protein_id=WP_271287523.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1977675	1978277	.	-	.	ID=gene-PHA55_RS09500;Name=PHA55_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09500;old_locus_tag=PHA55_09495
NZ_CP116044.1	Protein Homology	CDS	1977675	1978277	.	-	0	ID=cds-WP_271287524.1;Parent=gene-PHA55_RS09500;Dbxref=Genbank:WP_271287524.1;Name=WP_271287524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000906790.1;locus_tag=PHA55_RS09500;product=hypothetical protein;protein_id=WP_271287524.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1978364	1980268	.	+	.	ID=gene-PHA55_RS09505;Name=PHA55_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09505;old_locus_tag=PHA55_09500
NZ_CP116044.1	Protein Homology	CDS	1978364	1980268	.	+	0	ID=cds-WP_271287525.1;Parent=gene-PHA55_RS09505;Dbxref=Genbank:WP_271287525.1;Name=WP_271287525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000767431.1;locus_tag=PHA55_RS09505;product=phage terminase large subunit family protein;protein_id=WP_271287525.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1980341	1980835	.	+	.	ID=gene-PHA55_RS09510;Name=PHA55_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09510;old_locus_tag=PHA55_09505
NZ_CP116044.1	Protein Homology	CDS	1980341	1980835	.	+	0	ID=cds-WP_271287526.1;Parent=gene-PHA55_RS09510;Dbxref=Genbank:WP_271287526.1;Name=WP_271287526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001767166.1;locus_tag=PHA55_RS09510;product=hypothetical protein;protein_id=WP_271287526.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1980846	1982357	.	+	.	ID=gene-PHA55_RS09515;Name=PHA55_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09515;old_locus_tag=PHA55_09510
NZ_CP116044.1	Protein Homology	CDS	1980846	1982357	.	+	0	ID=cds-WP_271287527.1;Parent=gene-PHA55_RS09515;Dbxref=Genbank:WP_271287527.1;Name=WP_271287527.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000482547.1;locus_tag=PHA55_RS09515;product=phage portal protein;protein_id=WP_271287527.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1982403	1984403	.	+	.	ID=gene-PHA55_RS09520;Name=PHA55_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09520;old_locus_tag=PHA55_09515
NZ_CP116044.1	Protein Homology	CDS	1982403	1984403	.	+	0	ID=cds-WP_271287528.1;Parent=gene-PHA55_RS09520;Dbxref=Genbank:WP_271287528.1;Name=WP_271287528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000911566.1;locus_tag=PHA55_RS09520;product=phage major capsid protein;protein_id=WP_271287528.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1984553	1984843	.	+	.	ID=gene-PHA55_RS09525;Name=PHA55_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09525;old_locus_tag=PHA55_09520
NZ_CP116044.1	Protein Homology	CDS	1984553	1984843	.	+	0	ID=cds-WP_053919337.1;Parent=gene-PHA55_RS09525;Dbxref=Genbank:WP_053919337.1;Name=WP_053919337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000475583.1;locus_tag=PHA55_RS09525;product=hypothetical protein;protein_id=WP_053919337.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1984827	1985249	.	+	.	ID=gene-PHA55_RS09530;Name=PHA55_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09530;old_locus_tag=PHA55_09525
NZ_CP116044.1	Protein Homology	CDS	1984827	1985249	.	+	0	ID=cds-WP_000881569.1;Parent=gene-PHA55_RS09530;Dbxref=Genbank:WP_000881569.1;Name=WP_000881569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000881569.1;locus_tag=PHA55_RS09530;product=hypothetical protein;protein_id=WP_000881569.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1985259	1986092	.	+	.	ID=gene-PHA55_RS09535;Name=PHA55_RS09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09535;old_locus_tag=PHA55_09530
NZ_CP116044.1	Protein Homology	CDS	1985259	1986092	.	+	0	ID=cds-WP_271287529.1;Parent=gene-PHA55_RS09535;Dbxref=Genbank:WP_271287529.1;Name=WP_271287529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001417879.1;locus_tag=PHA55_RS09535;product=hypothetical protein;protein_id=WP_271287529.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1986169	1989780	.	+	.	ID=gene-PHA55_RS09540;Name=PHA55_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09540;old_locus_tag=PHA55_09535
NZ_CP116044.1	Protein Homology	CDS	1986169	1989780	.	+	0	ID=cds-WP_271287530.1;Parent=gene-PHA55_RS09540;Dbxref=Genbank:WP_271287530.1;Name=WP_271287530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000443949.1;locus_tag=PHA55_RS09540;product=tail fiber domain-containing protein;protein_id=WP_271287530.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1989838	1990314	.	+	.	ID=gene-PHA55_RS09545;Name=PHA55_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09545;old_locus_tag=PHA55_09540
NZ_CP116044.1	Protein Homology	CDS	1989838	1990314	.	+	0	ID=cds-WP_271287531.1;Parent=gene-PHA55_RS09545;Dbxref=Genbank:WP_271287531.1;Name=WP_271287531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000082618.1;locus_tag=PHA55_RS09545;product=phage tail tube protein;protein_id=WP_271287531.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1990474	1990980	.	+	.	ID=gene-PHA55_RS09550;Name=PHA55_RS09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09550;old_locus_tag=PHA55_09545
NZ_CP116044.1	Protein Homology	CDS	1990474	1990980	.	+	0	ID=cds-WP_271287532.1;Parent=gene-PHA55_RS09550;Dbxref=Genbank:WP_271287532.1;Name=WP_271287532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000024602.1;locus_tag=PHA55_RS09550;product=hypothetical protein;protein_id=WP_271287532.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1991014	1991322	.	+	.	ID=gene-PHA55_RS09555;Name=PHA55_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09555;old_locus_tag=PHA55_09550
NZ_CP116044.1	Protein Homology	CDS	1991014	1991322	.	+	0	ID=cds-WP_271287533.1;Parent=gene-PHA55_RS09555;Dbxref=Genbank:WP_271287533.1;Name=WP_271287533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024484.1;locus_tag=PHA55_RS09555;product=cytochrome;protein_id=WP_271287533.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1991367	1991699	.	+	.	ID=gene-PHA55_RS09560;Name=PHA55_RS09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09560;old_locus_tag=PHA55_09555
NZ_CP116044.1	Protein Homology	CDS	1991367	1991699	.	+	0	ID=cds-WP_224433082.1;Parent=gene-PHA55_RS09560;Dbxref=Genbank:WP_224433082.1;Name=WP_224433082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001406246.1;locus_tag=PHA55_RS09560;product=hypothetical protein;protein_id=WP_224433082.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1991763	1994282	.	+	.	ID=gene-PHA55_RS09565;Name=PHA55_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09565;old_locus_tag=PHA55_09560
NZ_CP116044.1	GeneMarkS-2+	CDS	1991763	1994282	.	+	0	ID=cds-WP_271287534.1;Parent=gene-PHA55_RS09565;Dbxref=Genbank:WP_271287534.1;Name=WP_271287534.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA55_RS09565;product=hypothetical protein;protein_id=WP_271287534.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1994333	1994893	.	+	.	ID=gene-PHA55_RS09570;Name=PHA55_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09570;old_locus_tag=PHA55_09565
NZ_CP116044.1	Protein Homology	CDS	1994333	1994893	.	+	0	ID=cds-WP_271287535.1;Parent=gene-PHA55_RS09570;Dbxref=Genbank:WP_271287535.1;Name=WP_271287535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001767177.1;locus_tag=PHA55_RS09570;product=hypothetical protein;protein_id=WP_271287535.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1994893	1995546	.	+	.	ID=gene-PHA55_RS09575;Name=PHA55_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09575;old_locus_tag=PHA55_09570
NZ_CP116044.1	Protein Homology	CDS	1994893	1995546	.	+	0	ID=cds-WP_271287536.1;Parent=gene-PHA55_RS09575;Dbxref=Genbank:WP_271287536.1;Name=WP_271287536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000201270.1;locus_tag=PHA55_RS09575;product=hypothetical protein;protein_id=WP_271287536.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1995596	1996015	.	+	.	ID=gene-PHA55_RS09580;Name=PHA55_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09580;old_locus_tag=PHA55_09575
NZ_CP116044.1	Protein Homology	CDS	1995596	1996015	.	+	0	ID=cds-WP_271287537.1;Parent=gene-PHA55_RS09580;Dbxref=Genbank:WP_271287537.1;Name=WP_271287537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000921234.1;locus_tag=PHA55_RS09580;product=hypothetical protein;protein_id=WP_271287537.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1996015	1999791	.	+	.	ID=gene-PHA55_RS09585;Name=PHA55_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09585;old_locus_tag=PHA55_09580
NZ_CP116044.1	Protein Homology	CDS	1996015	1999791	.	+	0	ID=cds-WP_271287538.1;Parent=gene-PHA55_RS09585;Dbxref=Genbank:WP_271287538.1;Name=WP_271287538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000505355.1;locus_tag=PHA55_RS09585;product=DUF1983 domain-containing protein;protein_id=WP_271287538.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	1999898	2000176	.	+	.	ID=gene-PHA55_RS09590;Name=PHA55_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09590;old_locus_tag=PHA55_09585
NZ_CP116044.1	Protein Homology	CDS	1999898	2000176	.	+	0	ID=cds-WP_271287539.1;Parent=gene-PHA55_RS09590;Dbxref=Genbank:WP_271287539.1;Name=WP_271287539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000136007.1;locus_tag=PHA55_RS09590;product=hypothetical protein;protein_id=WP_271287539.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2000196	2000366	.	+	.	ID=gene-PHA55_RS09595;Name=PHA55_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09595;old_locus_tag=PHA55_09590
NZ_CP116044.1	GeneMarkS-2+	CDS	2000196	2000366	.	+	0	ID=cds-WP_157943108.1;Parent=gene-PHA55_RS09595;Dbxref=Genbank:WP_157943108.1;Name=WP_157943108.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA55_RS09595;product=hypothetical protein;protein_id=WP_157943108.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2000368	2000967	.	+	.	ID=gene-PHA55_RS09600;Name=PHA55_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09600;old_locus_tag=PHA55_09595
NZ_CP116044.1	GeneMarkS-2+	CDS	2000368	2000967	.	+	0	ID=cds-WP_271287540.1;Parent=gene-PHA55_RS09600;Dbxref=Genbank:WP_271287540.1;Name=WP_271287540.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA55_RS09600;product=hypothetical protein;protein_id=WP_271287540.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2001006	2001353	.	+	.	ID=gene-PHA55_RS09605;Name=PHA55_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09605;old_locus_tag=PHA55_09600
NZ_CP116044.1	Protein Homology	CDS	2001006	2001353	.	+	0	ID=cds-WP_052974428.1;Parent=gene-PHA55_RS09605;Dbxref=Genbank:WP_052974428.1;Name=WP_052974428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001097086.1;locus_tag=PHA55_RS09605;product=hypothetical protein;protein_id=WP_052974428.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2001364	2001717	.	+	.	ID=gene-PHA55_RS09610;Name=PHA55_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09610;old_locus_tag=PHA55_09605
NZ_CP116044.1	Protein Homology	CDS	2001364	2001717	.	+	0	ID=cds-WP_271287541.1;Parent=gene-PHA55_RS09610;Dbxref=Genbank:WP_271287541.1;Name=WP_271287541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000949338.1;locus_tag=PHA55_RS09610;product=D-Ala-D-Ala carboxypeptidase family metallohydrolase;protein_id=WP_271287541.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2001749	2002333	.	-	.	ID=gene-PHA55_RS09615;Name=PHA55_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09615;old_locus_tag=PHA55_09610
NZ_CP116044.1	GeneMarkS-2+	CDS	2001749	2002333	.	-	0	ID=cds-WP_271287542.1;Parent=gene-PHA55_RS09615;Dbxref=Genbank:WP_271287542.1;Name=WP_271287542.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA55_RS09615;product=hypothetical protein;protein_id=WP_271287542.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2002431	2002835	.	+	.	ID=gene-PHA55_RS09620;Name=PHA55_RS09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09620;old_locus_tag=PHA55_09615
NZ_CP116044.1	GeneMarkS-2+	CDS	2002431	2002835	.	+	0	ID=cds-WP_271287543.1;Parent=gene-PHA55_RS09620;Dbxref=Genbank:WP_271287543.1;Name=WP_271287543.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA55_RS09620;product=hypothetical protein;protein_id=WP_271287543.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2002884	2003891	.	+	.	ID=gene-PHA55_RS09625;Name=PHA55_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09625;old_locus_tag=PHA55_09620
NZ_CP116044.1	Protein Homology	CDS	2002884	2003891	.	+	0	ID=cds-WP_271287544.1;Parent=gene-PHA55_RS09625;Dbxref=Genbank:WP_271287544.1;Name=WP_271287544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001098365.1;locus_tag=PHA55_RS09625;product=hypothetical protein;protein_id=WP_271287544.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2003965	2005644	.	-	.	ID=gene-PHA55_RS09630;Name=PHA55_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09630;old_locus_tag=PHA55_09625
NZ_CP116044.1	Protein Homology	CDS	2003965	2005644	.	-	0	ID=cds-WP_271287545.1;Parent=gene-PHA55_RS09630;Dbxref=Genbank:WP_271287545.1;Name=WP_271287545.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001406249.1;locus_tag=PHA55_RS09630;product=recombinase family protein;protein_id=WP_271287545.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2005746	2005973	.	-	.	ID=gene-PHA55_RS09635;Name=PHA55_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09635;old_locus_tag=PHA55_09630
NZ_CP116044.1	GeneMarkS-2+	CDS	2005746	2005973	.	-	0	ID=cds-WP_271287546.1;Parent=gene-PHA55_RS09635;Dbxref=Genbank:WP_271287546.1;Name=WP_271287546.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA55_RS09635;product=hypothetical protein;protein_id=WP_271287546.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2006260	2006529	.	-	.	ID=gene-PHA55_RS09640;Name=PHA55_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09640;old_locus_tag=PHA55_09635
NZ_CP116044.1	GeneMarkS-2+	CDS	2006260	2006529	.	-	0	ID=cds-WP_271287547.1;Parent=gene-PHA55_RS09640;Dbxref=Genbank:WP_271287547.1;Name=WP_271287547.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA55_RS09640;product=hypothetical protein;protein_id=WP_271287547.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2006540	2006812	.	-	.	ID=gene-PHA55_RS09645;Name=PHA55_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09645;old_locus_tag=PHA55_09640
NZ_CP116044.1	Protein Homology	CDS	2006540	2006812	.	-	0	ID=cds-WP_046788859.1;Parent=gene-PHA55_RS09645;Dbxref=Genbank:WP_046788859.1;Name=WP_046788859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001020594.1;locus_tag=PHA55_RS09645;product=hypothetical protein;protein_id=WP_046788859.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	2006852	2007193	.	+	.	ID=gene-PHA55_RS09650;Name=ycdX;gbkey=Gene;gene=ycdX;gene_biotype=pseudogene;locus_tag=PHA55_RS09650;old_locus_tag=PHA55_09645;partial=true;pseudo=true;start_range=.,2006852
NZ_CP116044.1	Protein Homology	CDS	2006852	2007193	.	+	0	ID=cds-PHA55_RS09650;Parent=gene-PHA55_RS09650;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=ycdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309438.1;locus_tag=PHA55_RS09650;partial=true;product=zinc-binding phosphatase;pseudo=true;start_range=.,2006852;transl_table=11
NZ_CP116044.1	RefSeq	gene	2007217	2007771	.	+	.	ID=gene-PHA55_RS09655;Name=ycdY;gbkey=Gene;gene=ycdY;gene_biotype=protein_coding;locus_tag=PHA55_RS09655;old_locus_tag=PHA55_09650
NZ_CP116044.1	Protein Homology	CDS	2007217	2007771	.	+	0	ID=cds-WP_001001902.1;Parent=gene-PHA55_RS09655;Dbxref=Genbank:WP_001001902.1;Name=WP_001001902.1;gbkey=CDS;gene=ycdY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309439.1;locus_tag=PHA55_RS09655;product=molecular chaperone YcdY;protein_id=WP_001001902.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2007873	2008364	.	+	.	ID=gene-PHA55_RS09660;Name=ycdZ;gbkey=Gene;gene=ycdZ;gene_biotype=protein_coding;locus_tag=PHA55_RS09660;old_locus_tag=PHA55_09655
NZ_CP116044.1	Protein Homology	CDS	2007873	2008364	.	+	0	ID=cds-WP_001297187.1;Parent=gene-PHA55_RS09660;Dbxref=Genbank:WP_001297187.1;Name=WP_001297187.1;gbkey=CDS;gene=ycdZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415554.4;locus_tag=PHA55_RS09660;product=DUF1097 domain-containing protein;protein_id=WP_001297187.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2008428	2009261	.	-	.	ID=gene-PHA55_RS09665;Name=csgG;gbkey=Gene;gene=csgG;gene_biotype=protein_coding;locus_tag=PHA55_RS09665;old_locus_tag=PHA55_09660
NZ_CP116044.1	Protein Homology	CDS	2008428	2009261	.	-	0	ID=cds-WP_001189321.1;Parent=gene-PHA55_RS09665;Dbxref=Genbank:WP_001189321.1;Name=WP_001189321.1;gbkey=CDS;gene=csgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309441.1;locus_tag=PHA55_RS09665;product=curli production assembly/transport protein CsgG;protein_id=WP_001189321.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2009288	2009704	.	-	.	ID=gene-PHA55_RS09670;Name=csgF;gbkey=Gene;gene=csgF;gene_biotype=protein_coding;locus_tag=PHA55_RS09670;old_locus_tag=PHA55_09665
NZ_CP116044.1	Protein Homology	CDS	2009288	2009704	.	-	0	ID=cds-WP_001264088.1;Parent=gene-PHA55_RS09670;Dbxref=Genbank:WP_001264088.1;Name=WP_001264088.1;gbkey=CDS;gene=csgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309442.1;locus_tag=PHA55_RS09670;product=curli production assembly/transport protein CsgF;protein_id=WP_001264088.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2009729	2010118	.	-	.	ID=gene-PHA55_RS09675;Name=csgE;gbkey=Gene;gene=csgE;gene_biotype=protein_coding;locus_tag=PHA55_RS09675;old_locus_tag=PHA55_09670
NZ_CP116044.1	Protein Homology	CDS	2009729	2010118	.	-	0	ID=cds-WP_088551768.1;Parent=gene-PHA55_RS09675;Dbxref=Genbank:WP_088551768.1;Name=WP_088551768.1;gbkey=CDS;gene=csgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309443.1;locus_tag=PHA55_RS09675;product=curli production assembly/transport protein CsgE;protein_id=WP_088551768.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2010123	2010773	.	-	.	ID=gene-PHA55_RS09680;Name=csgD;gbkey=Gene;gene=csgD;gene_biotype=protein_coding;locus_tag=PHA55_RS09680;old_locus_tag=PHA55_09675
NZ_CP116044.1	Protein Homology	CDS	2010123	2010773	.	-	0	ID=cds-WP_000481500.1;Parent=gene-PHA55_RS09680;Dbxref=Genbank:WP_000481500.1;Name=WP_000481500.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=csgD;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309444.1;locus_tag=PHA55_RS09680;product=biofilm master transcriptional regulator CsgD;protein_id=WP_000481500.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2011527	2011982	.	+	.	ID=gene-PHA55_RS09685;Name=csgB;gbkey=Gene;gene=csgB;gene_biotype=protein_coding;locus_tag=PHA55_RS09685;old_locus_tag=PHA55_09680
NZ_CP116044.1	Protein Homology	CDS	2011527	2011982	.	+	0	ID=cds-WP_000791650.1;Parent=gene-PHA55_RS09685;Dbxref=Genbank:WP_000791650.1;Name=WP_000791650.1;gbkey=CDS;gene=csgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309446.1;locus_tag=PHA55_RS09685;product=curli minor subunit CsgB;protein_id=WP_000791650.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2012023	2012478	.	+	.	ID=gene-PHA55_RS09690;Name=csgA;gbkey=Gene;gene=csgA;gene_biotype=protein_coding;locus_tag=PHA55_RS09690;old_locus_tag=PHA55_09685
NZ_CP116044.1	Protein Homology	CDS	2012023	2012478	.	+	0	ID=cds-WP_000771437.1;Parent=gene-PHA55_RS09690;Dbxref=Genbank:WP_000771437.1;Name=WP_000771437.1;gbkey=CDS;gene=csgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415560.1;locus_tag=PHA55_RS09690;product=curli major subunit CsgA;protein_id=WP_000771437.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2012537	2012869	.	+	.	ID=gene-PHA55_RS09695;Name=csgC;gbkey=Gene;gene=csgC;gene_biotype=protein_coding;locus_tag=PHA55_RS09695;old_locus_tag=PHA55_09690
NZ_CP116044.1	Protein Homology	CDS	2012537	2012869	.	+	0	ID=cds-WP_000992834.1;Parent=gene-PHA55_RS09695;Dbxref=Genbank:WP_000992834.1;Name=WP_000992834.1;gbkey=CDS;gene=csgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309448.1;locus_tag=PHA55_RS09695;product=curli assembly chaperone CsgC;protein_id=WP_000992834.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	2012990	2013300	.	+	.	ID=gene-PHA55_RS09700;Name=ymdA;gbkey=Gene;gene=ymdA;gene_biotype=pseudogene;locus_tag=PHA55_RS09700;old_locus_tag=PHA55_09695;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	2012990	2013300	.	+	0	ID=cds-PHA55_RS09700;Parent=gene-PHA55_RS09700;Note=frameshifted;gbkey=CDS;gene=ymdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309449.1;locus_tag=PHA55_RS09700;product=protein YmdA;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	2013395	2013928	.	+	.	ID=gene-PHA55_RS09705;Name=ymdB;gbkey=Gene;gene=ymdB;gene_biotype=protein_coding;locus_tag=PHA55_RS09705;old_locus_tag=PHA55_09700
NZ_CP116044.1	Protein Homology	CDS	2013395	2013928	.	+	0	ID=cds-WP_000857414.1;Parent=gene-PHA55_RS09705;Dbxref=Genbank:WP_000857414.1;Name=WP_000857414.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ymdB;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309450.1;locus_tag=PHA55_RS09705;product=O-acetyl-ADP-ribose deacetylase;protein_id=WP_000857414.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2013870	2015351	.	+	.	ID=gene-PHA55_RS09710;Name=clsC;gbkey=Gene;gene=clsC;gene_biotype=protein_coding;locus_tag=PHA55_RS09710;old_locus_tag=PHA55_09705
NZ_CP116044.1	Protein Homology	CDS	2013870	2015351	.	+	0	ID=cds-WP_001307714.1;Parent=gene-PHA55_RS09710;Dbxref=Genbank:WP_001307714.1;Name=WP_001307714.1;gbkey=CDS;gene=clsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706957.2;locus_tag=PHA55_RS09710;product=cardiolipin synthase ClsC;protein_id=WP_001307714.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2015359	2016516	.	-	.	ID=gene-PHA55_RS09715;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=PHA55_RS09715;old_locus_tag=PHA55_09710
NZ_CP116044.1	Protein Homology	CDS	2015359	2016516	.	-	0	ID=cds-WP_001070350.1;Parent=gene-PHA55_RS09715;Dbxref=Genbank:WP_001070350.1;Name=WP_001070350.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdoC;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706958.2;locus_tag=PHA55_RS09715;product=glucans biosynthesis protein MdoC;protein_id=WP_001070350.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2016910	2018445	.	+	.	ID=gene-PHA55_RS09720;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=PHA55_RS09720;old_locus_tag=PHA55_09715
NZ_CP116044.1	Protein Homology	CDS	2016910	2018445	.	+	0	ID=cds-WP_001300662.1;Parent=gene-PHA55_RS09720;Dbxref=Genbank:WP_001300662.1;Name=WP_001300662.1;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415566.1;locus_tag=PHA55_RS09720;product=glucans biosynthesis protein MdoG;protein_id=WP_001300662.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2018438	2020981	.	+	.	ID=gene-PHA55_RS09725;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=PHA55_RS09725;old_locus_tag=PHA55_09720
NZ_CP116044.1	Protein Homology	CDS	2018438	2020981	.	+	0	ID=cds-WP_001295445.1;Parent=gene-PHA55_RS09725;Dbxref=Genbank:WP_001295445.1;Name=WP_001295445.1;Ontology_term=GO:0016758;gbkey=CDS;gene=mdoH;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415567.1;locus_tag=PHA55_RS09725;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WP_001295445.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2021154	2021381	.	+	.	ID=gene-PHA55_RS09730;Name=yceK;gbkey=Gene;gene=yceK;gene_biotype=protein_coding;locus_tag=PHA55_RS09730;old_locus_tag=PHA55_09725
NZ_CP116044.1	Protein Homology	CDS	2021154	2021381	.	+	0	ID=cds-WP_001237205.1;Parent=gene-PHA55_RS09730;Dbxref=Genbank:WP_001237205.1;Name=WP_001237205.1;gbkey=CDS;gene=yceK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309455.1;locus_tag=PHA55_RS09730;product=YceK/YidQ family lipoprotein;protein_id=WP_001237205.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2021382	2021756	.	-	.	ID=gene-PHA55_RS09735;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=PHA55_RS09735;old_locus_tag=PHA55_09730
NZ_CP116044.1	Protein Homology	CDS	2021382	2021756	.	-	0	ID=cds-WP_000180056.1;Parent=gene-PHA55_RS09735;Dbxref=Genbank:WP_000180056.1;Name=WP_000180056.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309456.2;locus_tag=PHA55_RS09735;product=acidic protein MsyB;protein_id=WP_000180056.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2021839	2023065	.	-	.	ID=gene-PHA55_RS09740;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=PHA55_RS09740;old_locus_tag=PHA55_09735
NZ_CP116044.1	Protein Homology	CDS	2021839	2023065	.	-	0	ID=cds-WP_000074172.1;Parent=gene-PHA55_RS09740;Dbxref=Genbank:WP_000074172.1;Name=WP_000074172.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtG;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415571.1;locus_tag=PHA55_RS09740;product=multidrug efflux MFS transporter MdtG;protein_id=WP_000074172.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2023237	2024157	.	-	.	ID=gene-PHA55_RS09745;Name=lpxL;gbkey=Gene;gene=lpxL;gene_biotype=protein_coding;locus_tag=PHA55_RS09745;old_locus_tag=PHA55_09740
NZ_CP116044.1	Protein Homology	CDS	2023237	2024157	.	-	0	ID=cds-WP_000183364.1;Parent=gene-PHA55_RS09745;Dbxref=Genbank:WP_000183364.1;Name=WP_000183364.1;gbkey=CDS;gene=lpxL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309459.1;locus_tag=PHA55_RS09745;product=kdo(2)-lipid IV(A) lauroyltransferase;protein_id=WP_000183364.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2024382	2025434	.	+	.	ID=gene-PHA55_RS09750;Name=trhO;gbkey=Gene;gene=trhO;gene_biotype=protein_coding;locus_tag=PHA55_RS09750;old_locus_tag=PHA55_09745
NZ_CP116044.1	Protein Homology	CDS	2024382	2025434	.	+	0	ID=cds-WP_001144616.1;Parent=gene-PHA55_RS09750;Dbxref=Genbank:WP_001144616.1;Name=WP_001144616.1;gbkey=CDS;gene=trhO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706977.2;locus_tag=PHA55_RS09750;product=rhodanese-related sulfurtransferase;protein_id=WP_001144616.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2025476	2026051	.	-	.	ID=gene-PHA55_RS09755;Name=yceI;gbkey=Gene;gene=yceI;gene_biotype=protein_coding;locus_tag=PHA55_RS09755;old_locus_tag=PHA55_09750
NZ_CP116044.1	Protein Homology	CDS	2025476	2026051	.	-	0	ID=cds-WP_000749261.1;Parent=gene-PHA55_RS09755;Dbxref=Genbank:WP_000749261.1;Name=WP_000749261.1;gbkey=CDS;gene=yceI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309461.1;locus_tag=PHA55_RS09755;product=YceI family protein;protein_id=WP_000749261.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2026055	2026621	.	-	.	ID=gene-PHA55_RS09760;Name=yceJ;gbkey=Gene;gene=yceJ;gene_biotype=protein_coding;locus_tag=PHA55_RS09760;old_locus_tag=PHA55_09755
NZ_CP116044.1	Protein Homology	CDS	2026055	2026621	.	-	0	ID=cds-WP_000011108.1;Parent=gene-PHA55_RS09760;Dbxref=Genbank:WP_000011108.1;Name=WP_000011108.1;gbkey=CDS;gene=yceJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309462.1;locus_tag=PHA55_RS09760;product=cytochrome b;protein_id=WP_000011108.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2026882	2026995	.	-	.	ID=gene-PHA55_RS09765;Name=PHA55_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS09765;old_locus_tag=PHA55_09760
NZ_CP116044.1	Protein Homology	CDS	2026882	2026995	.	-	0	ID=cds-WP_001253418.1;Parent=gene-PHA55_RS09765;Dbxref=Genbank:WP_001253418.1;Name=WP_001253418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706980.2;locus_tag=PHA55_RS09765;product=YceO family protein;protein_id=WP_001253418.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2027043	2028161	.	-	.	ID=gene-PHA55_RS09770;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=PHA55_RS09770;old_locus_tag=PHA55_09765
NZ_CP116044.1	Protein Homology	CDS	2027043	2028161	.	-	0	ID=cds-WP_001471350.1;Parent=gene-PHA55_RS09770;Dbxref=Genbank:WP_001471350.1;Name=WP_001471350.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706981.1;locus_tag=PHA55_RS09770;product=N-methyl-L-tryptophan oxidase;protein_id=WP_001471350.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2028276	2028530	.	-	.	ID=gene-PHA55_RS09775;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=PHA55_RS09775;old_locus_tag=PHA55_09770
NZ_CP116044.1	Protein Homology	CDS	2028276	2028530	.	-	0	ID=cds-WP_000414437.1;Parent=gene-PHA55_RS09775;Dbxref=Genbank:WP_000414437.1;Name=WP_000414437.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309465.3;locus_tag=PHA55_RS09775;product=biofilm formation regulator BssS;protein_id=WP_000414437.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2028820	2029065	.	-	.	ID=gene-PHA55_RS09780;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=PHA55_RS09780;old_locus_tag=PHA55_09775
NZ_CP116044.1	Protein Homology	CDS	2028820	2029065	.	-	0	ID=cds-WP_001217754.1;Parent=gene-PHA55_RS09780;Dbxref=Genbank:WP_001217754.1;Name=WP_001217754.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309466.1;locus_tag=PHA55_RS09780;product=DNA damage-inducible protein I;protein_id=WP_001217754.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2029139	2030185	.	-	.	ID=gene-PHA55_RS09785;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=PHA55_RS09785;old_locus_tag=PHA55_09780
NZ_CP116044.1	Protein Homology	CDS	2029139	2030185	.	-	0	ID=cds-WP_000126556.1;Parent=gene-PHA55_RS09785;Dbxref=Genbank:WP_000126556.1;Name=WP_000126556.1;Ontology_term=GO:0009220,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415580.1;locus_tag=PHA55_RS09785;product=dihydroorotase;protein_id=WP_000126556.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2030291	2030851	.	-	.	ID=gene-PHA55_RS09790;Name=yceB;gbkey=Gene;gene=yceB;gene_biotype=protein_coding;locus_tag=PHA55_RS09790;old_locus_tag=PHA55_09785
NZ_CP116044.1	Protein Homology	CDS	2030291	2030851	.	-	0	ID=cds-WP_001295443.1;Parent=gene-PHA55_RS09790;Dbxref=Genbank:WP_001295443.1;Name=WP_001295443.1;gbkey=CDS;gene=yceB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415581.1;locus_tag=PHA55_RS09790;product=lipoprotein;protein_id=WP_001295443.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2030985	2031632	.	-	.	ID=gene-PHA55_RS09795;Name=grxB;gbkey=Gene;gene=grxB;gene_biotype=protein_coding;locus_tag=PHA55_RS09795;old_locus_tag=PHA55_09790
NZ_CP116044.1	Protein Homology	CDS	2030985	2031632	.	-	0	ID=cds-WP_000780912.1;Parent=gene-PHA55_RS09795;Dbxref=Genbank:WP_000780912.1;Name=WP_000780912.1;Ontology_term=GO:0006749,GO:0004362,GO:0005515;gbkey=CDS;gene=grxB;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309469.1;locus_tag=PHA55_RS09795;product=glutaredoxin 2;protein_id=WP_000780912.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2031696	2032904	.	-	.	ID=gene-PHA55_RS09800;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=PHA55_RS09800;old_locus_tag=PHA55_09795
NZ_CP116044.1	Protein Homology	CDS	2031696	2032904	.	-	0	ID=cds-WP_000092206.1;Parent=gene-PHA55_RS09800;Dbxref=Genbank:WP_000092206.1;Name=WP_000092206.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtH;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415583.4;locus_tag=PHA55_RS09800;product=multidrug efflux MFS transporter MdtH;protein_id=WP_000092206.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2033140	2033724	.	+	.	ID=gene-PHA55_RS09805;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=PHA55_RS09805;old_locus_tag=PHA55_09800
NZ_CP116044.1	Protein Homology	CDS	2033140	2033724	.	+	0	ID=cds-WP_000468186.1;Parent=gene-PHA55_RS09805;Dbxref=Genbank:WP_000468186.1;Name=WP_000468186.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309471.1;locus_tag=PHA55_RS09805;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WP_000468186.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2033735	2034382	.	+	.	ID=gene-PHA55_RS09810;Name=yceH;gbkey=Gene;gene=yceH;gene_biotype=protein_coding;locus_tag=PHA55_RS09810;old_locus_tag=PHA55_09805
NZ_CP116044.1	Protein Homology	CDS	2033735	2034382	.	+	0	ID=cds-WP_000877116.1;Parent=gene-PHA55_RS09810;Dbxref=Genbank:WP_000877116.1;Name=WP_000877116.1;gbkey=CDS;gene=yceH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309472.1;locus_tag=PHA55_RS09810;product=YceH family protein;protein_id=WP_000877116.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2034384	2035307	.	+	.	ID=gene-PHA55_RS09815;Name=yceM;gbkey=Gene;gene=yceM;gene_biotype=protein_coding;locus_tag=PHA55_RS09815;old_locus_tag=PHA55_09810
NZ_CP116044.1	Protein Homology	CDS	2034384	2035307	.	+	0	ID=cds-WP_000736125.1;Parent=gene-PHA55_RS09815;Dbxref=Genbank:WP_000736125.1;Name=WP_000736125.1;gbkey=CDS;gene=yceM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415586.1;locus_tag=PHA55_RS09815;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_000736125.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2035417	2036952	.	+	.	ID=gene-PHA55_RS09820;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=PHA55_RS09820;old_locus_tag=PHA55_09815
NZ_CP116044.1	Protein Homology	CDS	2035417	2036952	.	+	0	ID=cds-WP_001050672.1;Parent=gene-PHA55_RS09820;Dbxref=Genbank:WP_001050672.1;Name=WP_001050672.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706990.2;locus_tag=PHA55_RS09820;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_001050672.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2036992	2037408	.	-	.	ID=gene-PHA55_RS09825;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=PHA55_RS09825;old_locus_tag=PHA55_09820
NZ_CP116044.1	Protein Homology	CDS	2036992	2037408	.	-	0	ID=cds-WP_000197340.1;Parent=gene-PHA55_RS09825;Dbxref=Genbank:WP_000197340.1;Name=WP_000197340.1;gbkey=CDS;gene=flgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415588.1;locus_tag=PHA55_RS09825;product=flagella biosynthesis chaperone FlgN;protein_id=WP_000197340.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2037413	2037706	.	-	.	ID=gene-PHA55_RS09830;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=PHA55_RS09830;old_locus_tag=PHA55_09825
NZ_CP116044.1	Protein Homology	CDS	2037413	2037706	.	-	0	ID=cds-WP_000020884.1;Parent=gene-PHA55_RS09830;Dbxref=Genbank:WP_000020884.1;Name=WP_000020884.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309476.1;locus_tag=PHA55_RS09830;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_000020884.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2037782	2038441	.	-	.	ID=gene-PHA55_RS09835;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=PHA55_RS09835;old_locus_tag=PHA55_09830
NZ_CP116044.1	Protein Homology	CDS	2037782	2038441	.	-	0	ID=cds-WP_000879704.1;Parent=gene-PHA55_RS09835;Dbxref=Genbank:WP_000879704.1;Name=WP_000879704.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415590.1;locus_tag=PHA55_RS09835;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_000879704.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2038597	2039013	.	+	.	ID=gene-PHA55_RS09840;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=PHA55_RS09840;old_locus_tag=PHA55_09835
NZ_CP116044.1	Protein Homology	CDS	2038597	2039013	.	+	0	ID=cds-WP_000884702.1;Parent=gene-PHA55_RS09840;Dbxref=Genbank:WP_000884702.1;Name=WP_000884702.1;Ontology_term=GO:0001539,GO:0005198,GO:0009429;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C proximal rod|0009429||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415591.1;locus_tag=PHA55_RS09840;product=flagellar basal body rod protein FlgB;protein_id=WP_000884702.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2039017	2039421	.	+	.	ID=gene-PHA55_RS09845;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=PHA55_RS09845;old_locus_tag=PHA55_09840
NZ_CP116044.1	Protein Homology	CDS	2039017	2039421	.	+	0	ID=cds-WP_001196460.1;Parent=gene-PHA55_RS09845;Dbxref=Genbank:WP_001196460.1;Name=WP_001196460.1;Ontology_term=GO:0001539,GO:0005198,GO:0009425;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body|0009425||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740734.1;locus_tag=PHA55_RS09845;product=flagellar basal body rod protein FlgC;protein_id=WP_001196460.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2039433	2040128	.	+	.	ID=gene-PHA55_RS09850;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=PHA55_RS09850;old_locus_tag=PHA55_09845
NZ_CP116044.1	Protein Homology	CDS	2039433	2040128	.	+	0	ID=cds-WP_000020486.1;Parent=gene-PHA55_RS09850;Dbxref=Genbank:WP_000020486.1;Name=WP_000020486.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415593.1;locus_tag=PHA55_RS09850;product=flagellar hook assembly protein FlgD;protein_id=WP_000020486.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2040153	2041358	.	+	.	ID=gene-PHA55_RS09855;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=PHA55_RS09855;old_locus_tag=PHA55_09850
NZ_CP116044.1	Protein Homology	CDS	2040153	2041358	.	+	0	ID=cds-WP_000885878.1;Parent=gene-PHA55_RS09855;Dbxref=Genbank:WP_000885878.1;Name=WP_000885878.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309481.1;locus_tag=PHA55_RS09855;product=flagellar hook protein FlgE;protein_id=WP_000885878.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2041378	2042133	.	+	.	ID=gene-PHA55_RS09860;Name=flgF;gbkey=Gene;gene=flgF;gene_biotype=protein_coding;locus_tag=PHA55_RS09860;old_locus_tag=PHA55_09855
NZ_CP116044.1	Protein Homology	CDS	2041378	2042133	.	+	0	ID=cds-WP_000349300.1;Parent=gene-PHA55_RS09860;Dbxref=Genbank:WP_000349300.1;Name=WP_000349300.1;gbkey=CDS;gene=flgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415595.1;locus_tag=PHA55_RS09860;product=flagellar basal-body rod protein FlgF;protein_id=WP_000349300.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2042271	2043053	.	+	.	ID=gene-PHA55_RS09865;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=PHA55_RS09865;old_locus_tag=PHA55_09860
NZ_CP116044.1	Protein Homology	CDS	2042271	2043053	.	+	0	ID=cds-WP_000625837.1;Parent=gene-PHA55_RS09865;Dbxref=Genbank:WP_000625837.1;Name=WP_000625837.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=PHA55_RS09865;product=flagellar basal-body rod protein FlgG;protein_id=WP_000625837.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2043106	2043804	.	+	.	ID=gene-PHA55_RS09870;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=PHA55_RS09870;old_locus_tag=PHA55_09865
NZ_CP116044.1	Protein Homology	CDS	2043106	2043804	.	+	0	ID=cds-WP_001295442.1;Parent=gene-PHA55_RS09870;Dbxref=Genbank:WP_001295442.1;Name=WP_001295442.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309484.1;locus_tag=PHA55_RS09870;product=flagellar basal body L-ring protein FlgH;protein_id=WP_001295442.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2043816	2044913	.	+	.	ID=gene-PHA55_RS09875;Name=flgI;gbkey=Gene;gene=flgI;gene_biotype=protein_coding;locus_tag=PHA55_RS09875;old_locus_tag=PHA55_09870
NZ_CP116044.1	Protein Homology	CDS	2043816	2044913	.	+	0	ID=cds-WP_000589326.1;Parent=gene-PHA55_RS09875;Dbxref=Genbank:WP_000589326.1;Name=WP_000589326.1;gbkey=CDS;gene=flgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415598.3;locus_tag=PHA55_RS09875;product=flagellar basal body P-ring protein FlgI;protein_id=WP_000589326.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2044913	2045854	.	+	.	ID=gene-PHA55_RS09880;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=PHA55_RS09880;old_locus_tag=PHA55_09875
NZ_CP116044.1	Protein Homology	CDS	2044913	2045854	.	+	0	ID=cds-WP_001295441.1;Parent=gene-PHA55_RS09880;Dbxref=Genbank:WP_001295441.1;Name=WP_001295441.1;Ontology_term=GO:0001539,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415599.1;locus_tag=PHA55_RS09880;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_001295441.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2045920	2047563	.	+	.	ID=gene-PHA55_RS09885;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=PHA55_RS09885;old_locus_tag=PHA55_09880
NZ_CP116044.1	Protein Homology	CDS	2045920	2047563	.	+	0	ID=cds-WP_000096460.1;Parent=gene-PHA55_RS09885;Dbxref=Genbank:WP_000096460.1;Name=WP_000096460.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415600.1;locus_tag=PHA55_RS09885;product=flagellar hook-associated protein FlgK;protein_id=WP_000096460.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2047575	2048528	.	+	.	ID=gene-PHA55_RS09890;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=PHA55_RS09890;old_locus_tag=PHA55_09885
NZ_CP116044.1	Protein Homology	CDS	2047575	2048528	.	+	0	ID=cds-WP_001212781.1;Parent=gene-PHA55_RS09890;Dbxref=Genbank:WP_001212781.1;Name=WP_001212781.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415601.1;locus_tag=PHA55_RS09890;product=flagellar hook-associated protein FlgL;protein_id=WP_001212781.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2048725	2051910	.	-	.	ID=gene-PHA55_RS09895;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=PHA55_RS09895;old_locus_tag=PHA55_09890
NZ_CP116044.1	Protein Homology	CDS	2048725	2051910	.	-	0	ID=cds-WP_271287548.1;Parent=gene-PHA55_RS09895;Dbxref=Genbank:WP_271287548.1;Name=WP_271287548.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415602.1;locus_tag=PHA55_RS09895;product=ribonuclease E;protein_id=WP_271287548.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2052483	2053442	.	+	.	ID=gene-PHA55_RS09900;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=PHA55_RS09900;old_locus_tag=PHA55_09895
NZ_CP116044.1	Protein Homology	CDS	2052483	2053442	.	+	0	ID=cds-WP_000846343.1;Parent=gene-PHA55_RS09900;Dbxref=Genbank:WP_000846343.1;Name=WP_000846343.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415604.1;locus_tag=PHA55_RS09900;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_000846343.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2053554	2054138	.	-	.	ID=gene-PHA55_RS09905;Name=yceF;gbkey=Gene;gene=yceF;gene_biotype=protein_coding;locus_tag=PHA55_RS09905;old_locus_tag=PHA55_09900
NZ_CP116044.1	Protein Homology	CDS	2053554	2054138	.	-	0	ID=cds-WP_001125202.1;Parent=gene-PHA55_RS09905;Dbxref=Genbank:WP_001125202.1;Name=WP_001125202.1;gbkey=CDS;gene=yceF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415605.2;locus_tag=PHA55_RS09905;product=7-methyl-GTP pyrophosphatase;protein_id=WP_001125202.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2054337	2054858	.	+	.	ID=gene-PHA55_RS09910;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=PHA55_RS09910;old_locus_tag=PHA55_09905
NZ_CP116044.1	Protein Homology	CDS	2054337	2054858	.	+	0	ID=cds-WP_001174481.1;Parent=gene-PHA55_RS09910;Dbxref=Genbank:WP_001174481.1;Name=WP_001174481.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=PHA55_RS09910;product=23S rRNA accumulation protein YceD;protein_id=WP_001174481.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2054910	2055083	.	+	.	ID=gene-PHA55_RS09915;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=PHA55_RS09915;old_locus_tag=PHA55_09910
NZ_CP116044.1	Protein Homology	CDS	2054910	2055083	.	+	0	ID=cds-WP_000290727.1;Parent=gene-PHA55_RS09915;Dbxref=Genbank:WP_000290727.1;Name=WP_000290727.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmF;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=PHA55_RS09915;product=50S ribosomal protein L32;protein_id=WP_000290727.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2055164	2056234	.	+	.	ID=gene-PHA55_RS09920;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=PHA55_RS09920;old_locus_tag=PHA55_09915
NZ_CP116044.1	Protein Homology	CDS	2055164	2056234	.	+	0	ID=cds-WP_000197585.1;Parent=gene-PHA55_RS09920;Dbxref=Genbank:WP_000197585.1;Name=WP_000197585.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415608.2;locus_tag=PHA55_RS09920;product=phosphate acyltransferase PlsX;protein_id=WP_000197585.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2056302	2057255	.	+	.	ID=gene-PHA55_RS09925;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=PHA55_RS09925;old_locus_tag=PHA55_09920
NZ_CP116044.1	Protein Homology	CDS	2056302	2057255	.	+	0	ID=cds-WP_000288132.1;Parent=gene-PHA55_RS09925;Dbxref=Genbank:WP_000288132.1;Name=WP_000288132.1;gbkey=CDS;gene=fabH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=PHA55_RS09925;product=beta-ketoacyl-ACP synthase III;protein_id=WP_000288132.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2057271	2058200	.	+	.	ID=gene-PHA55_RS09930;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=PHA55_RS09930;old_locus_tag=PHA55_09925
NZ_CP116044.1	Protein Homology	CDS	2057271	2058200	.	+	0	ID=cds-WP_000191372.1;Parent=gene-PHA55_RS09930;Dbxref=Genbank:WP_000191372.1;Name=WP_000191372.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415610.1;locus_tag=PHA55_RS09930;product=ACP S-malonyltransferase;protein_id=WP_000191372.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2058213	2058947	.	+	.	ID=gene-PHA55_RS09935;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=PHA55_RS09935;old_locus_tag=PHA55_09930
NZ_CP116044.1	Protein Homology	CDS	2058213	2058947	.	+	0	ID=cds-WP_001008535.1;Parent=gene-PHA55_RS09935;Dbxref=Genbank:WP_001008535.1;Name=WP_001008535.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=PHA55_RS09935;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_001008535.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2059158	2059394	.	+	.	ID=gene-PHA55_RS09940;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=PHA55_RS09940;old_locus_tag=PHA55_09935
NZ_CP116044.1	Protein Homology	CDS	2059158	2059394	.	+	0	ID=cds-WP_000103754.1;Parent=gene-PHA55_RS09940;Dbxref=Genbank:WP_000103754.1;Name=WP_000103754.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=PHA55_RS09940;product=acyl carrier protein;protein_id=WP_000103754.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2059482	2060723	.	+	.	ID=gene-PHA55_RS09945;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=PHA55_RS09945;old_locus_tag=PHA55_09940
NZ_CP116044.1	Protein Homology	CDS	2059482	2060723	.	+	0	ID=cds-WP_000044679.1;Parent=gene-PHA55_RS09945;Dbxref=Genbank:WP_000044679.1;Name=WP_000044679.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309500.1;locus_tag=PHA55_RS09945;product=beta-ketoacyl-ACP synthase II;protein_id=WP_000044679.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2060843	2061652	.	+	.	ID=gene-PHA55_RS09950;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=PHA55_RS09950;old_locus_tag=PHA55_09945
NZ_CP116044.1	Protein Homology	CDS	2060843	2061652	.	+	0	ID=cds-WP_000478703.1;Parent=gene-PHA55_RS09950;Dbxref=Genbank:WP_000478703.1;Name=WP_000478703.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707012.1;locus_tag=PHA55_RS09950;product=aminodeoxychorismate lyase;protein_id=WP_000478703.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2061655	2062677	.	+	.	ID=gene-PHA55_RS09955;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=PHA55_RS09955;old_locus_tag=PHA55_09950
NZ_CP116044.1	Protein Homology	CDS	2061655	2062677	.	+	0	ID=cds-WP_000756838.1;Parent=gene-PHA55_RS09955;Dbxref=Genbank:WP_000756838.1;Name=WP_000756838.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415615.1;locus_tag=PHA55_RS09955;product=cell division protein YceG;protein_id=WP_000756838.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2062667	2063308	.	+	.	ID=gene-PHA55_RS09960;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=PHA55_RS09960;old_locus_tag=PHA55_09955
NZ_CP116044.1	Protein Homology	CDS	2062667	2063308	.	+	0	ID=cds-WP_001257000.1;Parent=gene-PHA55_RS09960;Dbxref=Genbank:WP_001257000.1;Name=WP_001257000.1;Ontology_term=GO:0015949,GO:0004798;gbkey=CDS;gene=tmk;go_function=thymidylate kinase activity|0004798||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415616.1;locus_tag=PHA55_RS09960;product=dTMP kinase;protein_id=WP_001257000.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2063305	2064309	.	+	.	ID=gene-PHA55_RS09965;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=PHA55_RS09965;old_locus_tag=PHA55_09960
NZ_CP116044.1	Protein Homology	CDS	2063305	2064309	.	+	0	ID=cds-WP_001267931.1;Parent=gene-PHA55_RS09965;Dbxref=Genbank:WP_001267931.1;Name=WP_001267931.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309504.1;locus_tag=PHA55_RS09965;product=DNA polymerase III subunit delta';protein_id=WP_001267931.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2064320	2065117	.	+	.	ID=gene-PHA55_RS09970;Name=ycfH;gbkey=Gene;gene=ycfH;gene_biotype=protein_coding;locus_tag=PHA55_RS09970;old_locus_tag=PHA55_09965
NZ_CP116044.1	Protein Homology	CDS	2064320	2065117	.	+	0	ID=cds-WP_000480245.1;Parent=gene-PHA55_RS09970;Dbxref=Genbank:WP_000480245.1;Name=WP_000480245.1;Ontology_term=GO:0016788;gbkey=CDS;gene=ycfH;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309505.1;locus_tag=PHA55_RS09970;product=metal-dependent hydrolase;protein_id=WP_000480245.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2065412	2066845	.	+	.	ID=gene-PHA55_RS09975;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=PHA55_RS09975;old_locus_tag=PHA55_09970
NZ_CP116044.1	Protein Homology	CDS	2065412	2066845	.	+	0	ID=cds-WP_000475719.1;Parent=gene-PHA55_RS09975;Dbxref=Genbank:WP_000475719.1;Name=WP_000475719.1;Ontology_term=GO:0009401,GO:1904659,GO:0005355,GO:0008982;gbkey=CDS;gene=ptsG;go_function=glucose transmembrane transporter activity|0005355||IEA,protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000475716.1;locus_tag=PHA55_RS09975;product=PTS glucose transporter subunit IIBC;protein_id=WP_000475719.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2066905	2069094	.	-	.	ID=gene-PHA55_RS09980;Name=fhuE;gbkey=Gene;gene=fhuE;gene_biotype=protein_coding;locus_tag=PHA55_RS09980;old_locus_tag=PHA55_09975
NZ_CP116044.1	Protein Homology	CDS	2066905	2069094	.	-	0	ID=cds-WP_042099659.1;Parent=gene-PHA55_RS09980;Dbxref=Genbank:WP_042099659.1;Name=WP_042099659.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuE;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309507.1;locus_tag=PHA55_RS09980;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;protein_id=WP_042099659.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2069428	2069787	.	+	.	ID=gene-PHA55_RS09985;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=PHA55_RS09985;old_locus_tag=PHA55_09980
NZ_CP116044.1	Protein Homology	CDS	2069428	2069787	.	+	0	ID=cds-WP_000807125.1;Parent=gene-PHA55_RS09985;Dbxref=Genbank:WP_000807125.1;Name=WP_000807125.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415621.3;locus_tag=PHA55_RS09985;product=purine nucleoside phosphoramidase;protein_id=WP_000807125.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2069790	2070167	.	+	.	ID=gene-PHA55_RS09990;Name=ycfL;gbkey=Gene;gene=ycfL;gene_biotype=protein_coding;locus_tag=PHA55_RS09990;old_locus_tag=PHA55_09985
NZ_CP116044.1	Protein Homology	CDS	2069790	2070167	.	+	0	ID=cds-WP_001225279.1;Parent=gene-PHA55_RS09990;Dbxref=Genbank:WP_001225279.1;Name=WP_001225279.1;gbkey=CDS;gene=ycfL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309509.1;locus_tag=PHA55_RS09990;product=YcfL family protein;protein_id=WP_001225279.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2070181	2070822	.	+	.	ID=gene-PHA55_RS09995;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=PHA55_RS09995;old_locus_tag=PHA55_09990
NZ_CP116044.1	Protein Homology	CDS	2070181	2070822	.	+	0	ID=cds-WP_000164439.1;Parent=gene-PHA55_RS09995;Dbxref=Genbank:WP_000164439.1;Name=WP_000164439.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309510.1;locus_tag=PHA55_RS09995;product=penicillin-binding protein activator LpoB;protein_id=WP_000164439.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2070803	2071627	.	+	.	ID=gene-PHA55_RS10000;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=PHA55_RS10000;old_locus_tag=PHA55_09995
NZ_CP116044.1	Protein Homology	CDS	2070803	2071627	.	+	0	ID=cds-WP_001116554.1;Parent=gene-PHA55_RS10000;Dbxref=Genbank:WP_001116554.1;Name=WP_001116554.1;Ontology_term=GO:0006772,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine metabolic process|0006772||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707021.1;locus_tag=PHA55_RS10000;product=thiamine kinase;protein_id=WP_001116554.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2071638	2072663	.	+	.	ID=gene-PHA55_RS10005;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=PHA55_RS10005;old_locus_tag=PHA55_10000
NZ_CP116044.1	Protein Homology	CDS	2071638	2072663	.	+	0	ID=cds-WP_000529331.1;Parent=gene-PHA55_RS10005;Dbxref=Genbank:WP_000529331.1;Name=WP_000529331.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415625.1;locus_tag=PHA55_RS10005;product=beta-N-acetylhexosaminidase;protein_id=WP_000529331.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2072686	2073228	.	+	.	ID=gene-PHA55_RS10010;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=PHA55_RS10010;old_locus_tag=PHA55_10005
NZ_CP116044.1	Protein Homology	CDS	2072686	2073228	.	+	0	ID=cds-WP_000587933.1;Parent=gene-PHA55_RS10010;Dbxref=Genbank:WP_000587933.1;Name=WP_000587933.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=PHA55_RS10010;product=alpha/beta hydrolase YcfP;protein_id=WP_000587933.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2073636	2074940	.	+	.	ID=gene-PHA55_RS10015;Name=ndh;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;locus_tag=PHA55_RS10015;old_locus_tag=PHA55_10010
NZ_CP116044.1	Protein Homology	CDS	2073636	2074940	.	+	0	ID=cds-WP_000211045.1;Parent=gene-PHA55_RS10015;Dbxref=Genbank:WP_000211045.1;Name=WP_000211045.1;gbkey=CDS;gene=ndh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384716.1;locus_tag=PHA55_RS10015;product=NADH-quinone dehydrogenase;protein_id=WP_000211045.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2075150	2075689	.	+	.	ID=gene-PHA55_RS10020;Name=ycfJ;gbkey=Gene;gene=ycfJ;gene_biotype=protein_coding;locus_tag=PHA55_RS10020;old_locus_tag=PHA55_10015
NZ_CP116044.1	Protein Homology	CDS	2075150	2075689	.	+	0	ID=cds-WP_001043459.1;Parent=gene-PHA55_RS10020;Dbxref=Genbank:WP_001043459.1;Name=WP_001043459.1;gbkey=CDS;gene=ycfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415628.1;locus_tag=PHA55_RS10020;product=glycine zipper 2TM domain-containing protein;protein_id=WP_001043459.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2075751	2076383	.	-	.	ID=gene-PHA55_RS10025;Name=comR;gbkey=Gene;gene=comR;gene_biotype=protein_coding;locus_tag=PHA55_RS10025;old_locus_tag=PHA55_10020
NZ_CP116044.1	Protein Homology	CDS	2075751	2076383	.	-	0	ID=cds-WP_000179805.1;Parent=gene-PHA55_RS10025;Dbxref=Genbank:WP_000179805.1;Name=WP_000179805.1;gbkey=CDS;gene=comR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415629.4;locus_tag=PHA55_RS10025;product=TetR family copper-responsive transcriptional repressor ComR;protein_id=WP_000179805.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2076624	2076881	.	+	.	ID=gene-PHA55_RS10030;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;gene_synonym=ycfR;locus_tag=PHA55_RS10030;old_locus_tag=PHA55_10025
NZ_CP116044.1	Protein Homology	CDS	2076624	2076881	.	+	0	ID=cds-WP_000800153.1;Parent=gene-PHA55_RS10030;Dbxref=Genbank:WP_000800153.1;Name=WP_000800153.1;gbkey=CDS;gene=bhsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309517.1;locus_tag=PHA55_RS10030;product=multiple stress resistance protein BhsA;protein_id=WP_000800153.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2076964	2077926	.	-	.	ID=gene-PHA55_RS10035;Name=ldtC;gbkey=Gene;gene=ldtC;gene_biotype=protein_coding;locus_tag=PHA55_RS10035;old_locus_tag=PHA55_10030
NZ_CP116044.1	Protein Homology	CDS	2076964	2077926	.	-	0	ID=cds-WP_201304559.1;Parent=gene-PHA55_RS10035;Dbxref=Genbank:WP_201304559.1;Name=WP_201304559.1;gbkey=CDS;gene=ldtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415631.1;locus_tag=PHA55_RS10035;product=L%2CD-transpeptidase LdtC;protein_id=WP_201304559.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2078070	2081516	.	-	.	ID=gene-PHA55_RS10040;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=PHA55_RS10040;old_locus_tag=PHA55_10035
NZ_CP116044.1	Protein Homology	CDS	2078070	2081516	.	-	0	ID=cds-WP_001297549.1;Parent=gene-PHA55_RS10040;Dbxref=Genbank:WP_001297549.1;Name=WP_001297549.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415632.1;locus_tag=PHA55_RS10040;product=transcription-repair coupling factor;protein_id=WP_001297549.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2081644	2082717	.	-	.	ID=gene-PHA55_RS10045;Name=ycfT;gbkey=Gene;gene=ycfT;gene_biotype=protein_coding;locus_tag=PHA55_RS10045;old_locus_tag=PHA55_10040
NZ_CP116044.1	Protein Homology	CDS	2081644	2082717	.	-	0	ID=cds-WP_000810275.1;Parent=gene-PHA55_RS10045;Dbxref=Genbank:WP_000810275.1;Name=WP_000810275.1;gbkey=CDS;gene=ycfT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415633.1;locus_tag=PHA55_RS10045;product=acyltransferase family protein;protein_id=WP_000810275.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2082979	2084178	.	+	.	ID=gene-PHA55_RS10050;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=PHA55_RS10050;old_locus_tag=PHA55_10045
NZ_CP116044.1	Protein Homology	CDS	2082979	2084178	.	+	0	ID=cds-WP_000284714.1;Parent=gene-PHA55_RS10050;Dbxref=Genbank:WP_000284714.1;Name=WP_000284714.1;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976588.1;locus_tag=PHA55_RS10050;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WP_000284714.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2084171	2084872	.	+	.	ID=gene-PHA55_RS10055;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=PHA55_RS10055;old_locus_tag=PHA55_10050
NZ_CP116044.1	Protein Homology	CDS	2084171	2084872	.	+	0	ID=cds-WP_001033694.1;Parent=gene-PHA55_RS10055;Dbxref=Genbank:WP_001033694.1;Name=WP_001033694.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415635.4;locus_tag=PHA55_RS10055;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_001033694.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2084872	2086116	.	+	.	ID=gene-PHA55_RS10060;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=PHA55_RS10060;old_locus_tag=PHA55_10055
NZ_CP116044.1	Protein Homology	CDS	2084872	2086116	.	+	0	ID=cds-WP_001251348.1;Parent=gene-PHA55_RS10060;Dbxref=Genbank:WP_001251348.1;Name=WP_001251348.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415636.1;locus_tag=PHA55_RS10060;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_001251348.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2086145	2087056	.	+	.	ID=gene-PHA55_RS10065;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=PHA55_RS10065;old_locus_tag=PHA55_10060
NZ_CP116044.1	Protein Homology	CDS	2086145	2087056	.	+	0	ID=cds-WP_000291270.1;Parent=gene-PHA55_RS10065;Dbxref=Genbank:WP_000291270.1;Name=WP_000291270.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415637.1;locus_tag=PHA55_RS10065;product=N-acetylglucosamine kinase;protein_id=WP_000291270.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2087072	2087893	.	+	.	ID=gene-PHA55_RS10070;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=PHA55_RS10070;old_locus_tag=PHA55_10065
NZ_CP116044.1	Protein Homology	CDS	2087072	2087893	.	+	0	ID=cds-WP_000952736.1;Parent=gene-PHA55_RS10070;Dbxref=Genbank:WP_000952736.1;Name=WP_000952736.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309525.1;locus_tag=PHA55_RS10070;product=NAD-dependent protein deacylase;protein_id=WP_000952736.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2088032	2088820	.	-	.	ID=gene-PHA55_RS10075;Name=ycfZ;gbkey=Gene;gene=ycfZ;gene_biotype=protein_coding;locus_tag=PHA55_RS10075;old_locus_tag=PHA55_10070
NZ_CP116044.1	Protein Homology	CDS	2088032	2088820	.	-	0	ID=cds-WP_000713472.1;Parent=gene-PHA55_RS10075;Dbxref=Genbank:WP_000713472.1;Name=WP_000713472.1;gbkey=CDS;gene=ycfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415639.1;locus_tag=PHA55_RS10075;product=TPM domain-containing protein;protein_id=WP_000713472.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2088817	2089278	.	-	.	ID=gene-PHA55_RS10080;Name=PHA55_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS10080;old_locus_tag=PHA55_10075
NZ_CP116044.1	Protein Homology	CDS	2088817	2089278	.	-	0	ID=cds-WP_001442351.1;Parent=gene-PHA55_RS10080;Dbxref=Genbank:WP_001442351.1;Name=WP_001442351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001442351.1;locus_tag=PHA55_RS10080;product=DUF3592 domain-containing protein;protein_id=WP_001442351.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2089336	2090382	.	-	.	ID=gene-PHA55_RS10085;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=PHA55_RS10085;old_locus_tag=PHA55_10080
NZ_CP116044.1	Protein Homology	CDS	2089336	2090382	.	-	0	ID=cds-WP_000759318.1;Parent=gene-PHA55_RS10085;Dbxref=Genbank:WP_000759318.1;Name=WP_000759318.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potD;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=PHA55_RS10085;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=WP_000759318.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2090379	2091173	.	-	.	ID=gene-PHA55_RS10090;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=PHA55_RS10090;old_locus_tag=PHA55_10085
NZ_CP116044.1	Protein Homology	CDS	2090379	2091173	.	-	0	ID=cds-WP_000580316.1;Parent=gene-PHA55_RS10090;Dbxref=Genbank:WP_000580316.1;Name=WP_000580316.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309527.1;locus_tag=PHA55_RS10090;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WP_000580316.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2091170	2092027	.	-	.	ID=gene-PHA55_RS10095;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=PHA55_RS10095;old_locus_tag=PHA55_10090
NZ_CP116044.1	Protein Homology	CDS	2091170	2092027	.	-	0	ID=cds-WP_000799401.1;Parent=gene-PHA55_RS10095;Dbxref=Genbank:WP_000799401.1;Name=WP_000799401.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000799378.1;locus_tag=PHA55_RS10095;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WP_000799401.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2092011	2093147	.	-	.	ID=gene-PHA55_RS10100;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=PHA55_RS10100;old_locus_tag=PHA55_10095
NZ_CP116044.1	Protein Homology	CDS	2092011	2093147	.	-	0	ID=cds-WP_000531601.1;Parent=gene-PHA55_RS10100;Dbxref=Genbank:WP_000531601.1;Name=WP_000531601.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309598.1;locus_tag=PHA55_RS10100;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WP_000531601.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2093397	2094626	.	+	.	ID=gene-PHA55_RS10105;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=PHA55_RS10105;old_locus_tag=PHA55_10100
NZ_CP116044.1	Protein Homology	CDS	2093397	2094626	.	+	0	ID=cds-WP_000359463.1;Parent=gene-PHA55_RS10105;Dbxref=Genbank:WP_000359463.1;Name=WP_000359463.1;Ontology_term=GO:0006508,GO:0045148;gbkey=CDS;gene=pepT;go_function=tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000359435.1;locus_tag=PHA55_RS10105;product=peptidase T;protein_id=WP_000359463.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2094772	2095893	.	-	.	ID=gene-PHA55_RS10110;Name=roxA;gbkey=Gene;gene=roxA;gene_biotype=protein_coding;gene_synonym=ycfD;locus_tag=PHA55_RS10110;old_locus_tag=PHA55_10105
NZ_CP116044.1	Protein Homology	CDS	2094772	2095893	.	-	0	ID=cds-WP_001295435.1;Parent=gene-PHA55_RS10110;Dbxref=Genbank:WP_001295435.1;Name=WP_001295435.1;gbkey=CDS;gene=roxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309600.2;locus_tag=PHA55_RS10110;product=[50S ribosomal protein L16]-arginine 3-hydroxylase;protein_id=WP_001295435.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2095969	2097429	.	-	.	ID=gene-PHA55_RS10115;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=PHA55_RS10115;old_locus_tag=PHA55_10110
NZ_CP116044.1	Protein Homology	CDS	2095969	2097429	.	-	0	ID=cds-WP_000735412.1;Parent=gene-PHA55_RS10115;Dbxref=Genbank:WP_000735412.1;Name=WP_000735412.1;Ontology_term=GO:0000160,GO:0000155,GO:0004673,GO:0016772;gbkey=CDS;gene=phoQ;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415647.1;locus_tag=PHA55_RS10115;product=two-component system sensor histidine kinase PhoQ;protein_id=WP_000735412.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2097429	2098100	.	-	.	ID=gene-PHA55_RS10120;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=PHA55_RS10120;old_locus_tag=PHA55_10115
NZ_CP116044.1	Protein Homology	CDS	2097429	2098100	.	-	0	ID=cds-WP_001265481.1;Parent=gene-PHA55_RS10120;Dbxref=Genbank:WP_001265481.1;Name=WP_001265481.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707059.1;locus_tag=PHA55_RS10120;product=two-component system response regulator PhoP;protein_id=WP_001265481.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2098268	2099638	.	-	.	ID=gene-PHA55_RS10125;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=PHA55_RS10125;old_locus_tag=PHA55_10120
NZ_CP116044.1	Protein Homology	CDS	2098268	2099638	.	-	0	ID=cds-WP_000423729.1;Parent=gene-PHA55_RS10125;Dbxref=Genbank:WP_000423729.1;Name=WP_000423729.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950897.1;locus_tag=PHA55_RS10125;product=adenylosuccinate lyase;protein_id=WP_000423729.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2099642	2100283	.	-	.	ID=gene-PHA55_RS10130;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=PHA55_RS10130;old_locus_tag=PHA55_10125
NZ_CP116044.1	Protein Homology	CDS	2099642	2100283	.	-	0	ID=cds-WP_001297479.1;Parent=gene-PHA55_RS10130;Dbxref=Genbank:WP_001297479.1;Name=WP_001297479.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415650.1;locus_tag=PHA55_RS10130;product=high frequency lysogenization protein HflD;protein_id=WP_001297479.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2100319	2101425	.	-	.	ID=gene-PHA55_RS10135;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=PHA55_RS10135;old_locus_tag=PHA55_10130
NZ_CP116044.1	Protein Homology	CDS	2100319	2101425	.	-	0	ID=cds-WP_001297484.1;Parent=gene-PHA55_RS10135;Dbxref=Genbank:WP_001297484.1;Name=WP_001297484.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415651.4;locus_tag=PHA55_RS10135;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_001297484.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2101479	2101940	.	-	.	ID=gene-PHA55_RS10140;Name=nudJ;gbkey=Gene;gene=nudJ;gene_biotype=protein_coding;locus_tag=PHA55_RS10140;old_locus_tag=PHA55_10135
NZ_CP116044.1	Protein Homology	CDS	2101479	2101940	.	-	0	ID=cds-WP_000476089.1;Parent=gene-PHA55_RS10140;Dbxref=Genbank:WP_000476089.1;Name=WP_000476089.1;gbkey=CDS;gene=nudJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309633.1;locus_tag=PHA55_RS10140;product=phosphatase NudJ;protein_id=WP_000476089.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2101950	2102603	.	-	.	ID=gene-PHA55_RS10145;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=PHA55_RS10145;old_locus_tag=PHA55_10140
NZ_CP116044.1	Protein Homology	CDS	2101950	2102603	.	-	0	ID=cds-WP_001248691.1;Parent=gene-PHA55_RS10145;Dbxref=Genbank:WP_001248691.1;Name=WP_001248691.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415653.4;locus_tag=PHA55_RS10145;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WP_001248691.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2102775	2104025	.	+	.	ID=gene-PHA55_RS10150;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=PHA55_RS10150;old_locus_tag=PHA55_10145
NZ_CP116044.1	Protein Homology	CDS	2102775	2104025	.	+	0	ID=cds-WP_000444487.1;Parent=gene-PHA55_RS10150;Dbxref=Genbank:WP_000444487.1;Name=WP_000444487.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=PHA55_RS10150;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_000444487.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2104128	2104451	.	-	.	ID=gene-PHA55_RS10155;Name=iraM;gbkey=Gene;gene=iraM;gene_biotype=protein_coding;locus_tag=PHA55_RS10155;old_locus_tag=PHA55_10150
NZ_CP116044.1	Protein Homology	CDS	2104128	2104451	.	-	0	ID=cds-WP_001325741.1;Parent=gene-PHA55_RS10155;Dbxref=Genbank:WP_001325741.1;Name=WP_001325741.1;gbkey=CDS;gene=iraM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415678.1;locus_tag=PHA55_RS10155;product=anti-adapter protein IraM;protein_id=WP_001325741.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2104704	2104748	.	-	.	ID=gene-PHA55_RS10160;Name=PHA55_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS10160;old_locus_tag=PHA55_10155
NZ_CP116044.1	Protein Homology	CDS	2104704	2104748	.	-	0	ID=cds-WP_120795380.1;Parent=gene-PHA55_RS10160;Dbxref=Genbank:WP_120795380.1;Name=WP_120795380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518766.1;locus_tag=PHA55_RS10160;product=protein YmgK;protein_id=WP_120795380.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2104984	2105094	.	-	.	ID=gene-PHA55_RS10165;Name=PHA55_RS10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS10165;old_locus_tag=PHA55_10160
NZ_CP116044.1	Protein Homology	CDS	2104984	2105094	.	-	0	ID=cds-WP_032141808.1;Parent=gene-PHA55_RS10165;Dbxref=Genbank:WP_032141808.1;Name=WP_032141808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518767.1;locus_tag=PHA55_RS10165;product=hypothetical protein;protein_id=WP_032141808.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2105147	2105551	.	-	.	ID=gene-PHA55_RS10170;Name=ycgX;gbkey=Gene;gene=ycgX;gene_biotype=protein_coding;locus_tag=PHA55_RS10170;old_locus_tag=PHA55_10165
NZ_CP116044.1	Protein Homology	CDS	2105147	2105551	.	-	0	ID=cds-WP_000373101.1;Parent=gene-PHA55_RS10170;Dbxref=Genbank:WP_000373101.1;Name=WP_000373101.1;gbkey=CDS;gene=ycgX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415679.1;locus_tag=PHA55_RS10170;product=DUF1398 domain-containing protein;protein_id=WP_000373101.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2105772	2106503	.	-	.	ID=gene-PHA55_RS10175;Name=bluR;gbkey=Gene;gene=bluR;gene_biotype=protein_coding;locus_tag=PHA55_RS10175;old_locus_tag=PHA55_10170
NZ_CP116044.1	Protein Homology	CDS	2105772	2106503	.	-	0	ID=cds-WP_000332303.1;Parent=gene-PHA55_RS10175;Dbxref=Genbank:WP_000332303.1;Name=WP_000332303.1;gbkey=CDS;gene=bluR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415680.1;locus_tag=PHA55_RS10175;product=DNA-binding transcriptional repressor BluR;protein_id=WP_000332303.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2106708	2107919	.	-	.	ID=gene-PHA55_RS10180;Name=bluF;gbkey=Gene;gene=bluF;gene_biotype=protein_coding;locus_tag=PHA55_RS10180;old_locus_tag=PHA55_10175
NZ_CP116044.1	Protein Homology	CDS	2106708	2107919	.	-	0	ID=cds-WP_001299269.1;Parent=gene-PHA55_RS10180;Dbxref=Genbank:WP_001299269.1;Name=WP_001299269.1;gbkey=CDS;gene=bluF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415681.1;locus_tag=PHA55_RS10180;product=blue light-responsive regulator BluF;protein_id=WP_001299269.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2108233	2108469	.	+	.	ID=gene-PHA55_RS10185;Name=ycgZ;gbkey=Gene;gene=ycgZ;gene_biotype=protein_coding;locus_tag=PHA55_RS10185;old_locus_tag=PHA55_10180
NZ_CP116044.1	Protein Homology	CDS	2108233	2108469	.	+	0	ID=cds-WP_000554153.1;Parent=gene-PHA55_RS10185;Dbxref=Genbank:WP_000554153.1;Name=WP_000554153.1;gbkey=CDS;gene=ycgZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415682.1;locus_tag=PHA55_RS10185;product=regulatory protein YcgZ;protein_id=WP_000554153.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2108512	2108784	.	+	.	ID=gene-PHA55_RS10190;Name=ymgA;gbkey=Gene;gene=ymgA;gene_biotype=protein_coding;locus_tag=PHA55_RS10190;old_locus_tag=PHA55_10185
NZ_CP116044.1	Protein Homology	CDS	2108512	2108784	.	+	0	ID=cds-WP_000858002.1;Parent=gene-PHA55_RS10190;Dbxref=Genbank:WP_000858002.1;Name=WP_000858002.1;gbkey=CDS;gene=ymgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415683.1;locus_tag=PHA55_RS10190;product=two-component-system connector protein YmgA;protein_id=WP_000858002.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2108813	2109079	.	+	.	ID=gene-PHA55_RS10195;Name=ariR;gbkey=Gene;gene=ariR;gene_biotype=protein_coding;locus_tag=PHA55_RS10195;old_locus_tag=PHA55_10190
NZ_CP116044.1	Protein Homology	CDS	2108813	2109079	.	+	0	ID=cds-WP_000888772.1;Parent=gene-PHA55_RS10195;Dbxref=Genbank:WP_000888772.1;Name=WP_000888772.1;gbkey=CDS;gene=ariR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415684.1;locus_tag=PHA55_RS10195;product=biofilm/acid-resistance regulator AriR;protein_id=WP_000888772.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2109192	2109440	.	+	.	ID=gene-PHA55_RS10200;Name=ymgC;gbkey=Gene;gene=ymgC;gene_biotype=protein_coding;locus_tag=PHA55_RS10200;old_locus_tag=PHA55_10195
NZ_CP116044.1	Protein Homology	CDS	2109192	2109440	.	+	0	ID=cds-WP_001065752.1;Parent=gene-PHA55_RS10200;Dbxref=Genbank:WP_001065752.1;Name=WP_001065752.1;gbkey=CDS;gene=ymgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415685.1;locus_tag=PHA55_RS10200;product=protein YmgC;protein_id=WP_001065752.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2109771	2111294	.	+	.	ID=gene-PHA55_RS10205;Name=pdeG;gbkey=Gene;gene=pdeG;gene_biotype=protein_coding;locus_tag=PHA55_RS10205;old_locus_tag=PHA55_10200
NZ_CP116044.1	Protein Homology	CDS	2109771	2111294	.	+	0	ID=cds-WP_001246498.1;Parent=gene-PHA55_RS10205;Dbxref=Genbank:WP_001246498.1;Name=WP_001246498.1;gbkey=CDS;gene=pdeG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415686.2;locus_tag=PHA55_RS10205;product=cyclic diguanylate phosphodiesterase;protein_id=WP_001246498.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2111426	2111644	.	+	.	ID=gene-PHA55_RS10210;Name=ymgF;gbkey=Gene;gene=ymgF;gene_biotype=protein_coding;locus_tag=PHA55_RS10210;old_locus_tag=PHA55_10205
NZ_CP116044.1	Protein Homology	CDS	2111426	2111644	.	+	0	ID=cds-WP_001299921.1;Parent=gene-PHA55_RS10210;Dbxref=Genbank:WP_001299921.1;Name=WP_001299921.1;gbkey=CDS;gene=ymgF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588447.1;locus_tag=PHA55_RS10210;product=protein YmgF;protein_id=WP_001299921.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	2112044	2114691	.	+	.	ID=gene-PHA55_RS10215;Name=PHA55_RS10215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS10215;old_locus_tag=PHA55_10210;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	2112044	2114691	.	+	0	ID=cds-PHA55_RS10215;Parent=gene-PHA55_RS10215;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000768537.1;locus_tag=PHA55_RS10215;product=ECIAI39_1904 family autotransporter adhesin;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	2114748	2115083	.	-	.	ID=gene-PHA55_RS10220;Name=ymgD;gbkey=Gene;gene=ymgD;gene_biotype=protein_coding;locus_tag=PHA55_RS10220;old_locus_tag=PHA55_10215
NZ_CP116044.1	Protein Homology	CDS	2114748	2115083	.	-	0	ID=cds-WP_000979977.1;Parent=gene-PHA55_RS10220;Dbxref=Genbank:WP_000979977.1;Name=WP_000979977.1;gbkey=CDS;gene=ymgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707068.1;locus_tag=PHA55_RS10220;product=YmgD family protein;protein_id=WP_000979977.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2115087	2115431	.	-	.	ID=gene-PHA55_RS10225;Name=ymgG;gbkey=Gene;gene=ymgG;gene_biotype=protein_coding;locus_tag=PHA55_RS10225;old_locus_tag=PHA55_10220
NZ_CP116044.1	Protein Homology	CDS	2115087	2115431	.	-	0	ID=cds-WP_000726974.1;Parent=gene-PHA55_RS10225;Dbxref=Genbank:WP_000726974.1;Name=WP_000726974.1;gbkey=CDS;gene=ymgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415690.5;locus_tag=PHA55_RS10225;product=glycine zipper domain-containing protein;protein_id=WP_000726974.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2115433	2115606	.	-	.	ID=gene-PHA55_RS10230;Name=ymgI;gbkey=Gene;gene=ymgI;gene_biotype=protein_coding;locus_tag=PHA55_RS10230;old_locus_tag=PHA55_10225
NZ_CP116044.1	Protein Homology	CDS	2115433	2115606	.	-	0	ID=cds-WP_000122462.1;Parent=gene-PHA55_RS10230;Dbxref=Genbank:WP_000122462.1;Name=WP_000122462.1;gbkey=CDS;gene=ymgI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165314.1;locus_tag=PHA55_RS10230;product=protein YmgI;protein_id=WP_000122462.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2115707	2115892	.	+	.	ID=gene-PHA55_RS10235;Name=ymgJ;gbkey=Gene;gene=ymgJ;gene_biotype=protein_coding;locus_tag=PHA55_RS10235;old_locus_tag=PHA55_10230
NZ_CP116044.1	Protein Homology	CDS	2115707	2115892	.	+	0	ID=cds-WP_001325743.1;Parent=gene-PHA55_RS10235;Dbxref=Genbank:WP_001325743.1;Name=WP_001325743.1;gbkey=CDS;gene=ymgJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165315.1;locus_tag=PHA55_RS10235;product=protein YmgJ;protein_id=WP_001325743.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2115853	2115972	.	+	.	ID=gene-PHA55_RS10240;Name=PHA55_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS10240;old_locus_tag=PHA55_10235
NZ_CP116044.1	Protein Homology	CDS	2115853	2115972	.	+	0	ID=cds-WP_001131446.1;Parent=gene-PHA55_RS10240;Dbxref=Genbank:WP_001131446.1;Name=WP_001131446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001131457.1;locus_tag=PHA55_RS10240;product=hypothetical protein;protein_id=WP_001131446.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	2116007	2116351	.	+	.	ID=gene-PHA55_RS10245;Name=PHA55_RS10245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS10245;old_locus_tag=PHA55_10240;partial=true;pseudo=true;start_range=.,2116007
NZ_CP116044.1	Protein Homology	CDS	2116007	2116351	.	+	0	ID=cds-PHA55_RS10245;Parent=gene-PHA55_RS10245;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0046819,GO:0015474,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=autotransporter activity|0015474||IEA;go_process=protein secretion by the type V secretion system|0046819||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311542.2;locus_tag=PHA55_RS10245;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;start_range=.,2116007;transl_table=11
NZ_CP116044.1	RefSeq	gene	2116723	2116989	.	-	.	ID=gene-PHA55_RS10250;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=PHA55_RS10250;old_locus_tag=PHA55_10245
NZ_CP116044.1	Protein Homology	CDS	2116723	2116989	.	-	0	ID=cds-WP_001185665.1;Parent=gene-PHA55_RS10250;Dbxref=Genbank:WP_001185665.1;Name=WP_001185665.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309695.1;locus_tag=PHA55_RS10250;product=cell division topological specificity factor MinE;protein_id=WP_001185665.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2116993	2117805	.	-	.	ID=gene-PHA55_RS10255;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=PHA55_RS10255;old_locus_tag=PHA55_10250
NZ_CP116044.1	Protein Homology	CDS	2116993	2117805	.	-	0	ID=cds-WP_000101055.1;Parent=gene-PHA55_RS10255;Dbxref=Genbank:WP_000101055.1;Name=WP_000101055.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=PHA55_RS10255;product=septum site-determining protein MinD;protein_id=WP_000101055.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2117829	2118524	.	-	.	ID=gene-PHA55_RS10260;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=PHA55_RS10260;old_locus_tag=PHA55_10255
NZ_CP116044.1	Protein Homology	CDS	2117829	2118524	.	-	0	ID=cds-WP_000072536.1;Parent=gene-PHA55_RS10260;Dbxref=Genbank:WP_000072536.1;Name=WP_000072536.1;Ontology_term=GO:0000918,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309697.1;locus_tag=PHA55_RS10260;product=septum site-determining protein MinC;protein_id=WP_000072536.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2119044	2119412	.	+	.	ID=gene-PHA55_RS10265;Name=ycgJ;gbkey=Gene;gene=ycgJ;gene_biotype=protein_coding;locus_tag=PHA55_RS10265;old_locus_tag=PHA55_10260
NZ_CP116044.1	Protein Homology	CDS	2119044	2119412	.	+	0	ID=cds-WP_001056831.1;Parent=gene-PHA55_RS10265;Dbxref=Genbank:WP_001056831.1;Name=WP_001056831.1;gbkey=CDS;gene=ycgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309698.1;locus_tag=PHA55_RS10265;product=YcgJ family protein;protein_id=WP_001056831.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2119532	2119933	.	-	.	ID=gene-PHA55_RS10270;Name=pliG;gbkey=Gene;gene=pliG;gene_biotype=protein_coding;locus_tag=PHA55_RS10270;old_locus_tag=PHA55_10265
NZ_CP116044.1	Protein Homology	CDS	2119532	2119933	.	-	0	ID=cds-WP_000695223.1;Parent=gene-PHA55_RS10270;Dbxref=Genbank:WP_000695223.1;Name=WP_000695223.1;gbkey=CDS;gene=pliG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309699.1;locus_tag=PHA55_RS10270;product=PPC domain-containing protein;protein_id=WP_000695223.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2120175	2120468	.	+	.	ID=gene-PHA55_RS10275;Name=PHA55_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS10275;old_locus_tag=PHA55_10270
NZ_CP116044.1	Protein Homology	CDS	2120175	2120468	.	+	0	ID=cds-WP_001297679.1;Parent=gene-PHA55_RS10275;Dbxref=Genbank:WP_001297679.1;Name=WP_001297679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309701.2;locus_tag=PHA55_RS10275;product=YcgL domain-containing protein;protein_id=WP_001297679.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2120540	2121199	.	+	.	ID=gene-PHA55_RS10280;Name=ycgM;gbkey=Gene;gene=ycgM;gene_biotype=protein_coding;locus_tag=PHA55_RS10280;old_locus_tag=PHA55_10275
NZ_CP116044.1	Protein Homology	CDS	2120540	2121199	.	+	0	ID=cds-WP_000284276.1;Parent=gene-PHA55_RS10280;Dbxref=Genbank:WP_000284276.1;Name=WP_000284276.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ycgM;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309702.1;locus_tag=PHA55_RS10280;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_000284276.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2121291	2121737	.	+	.	ID=gene-PHA55_RS10285;Name=ycgN;gbkey=Gene;gene=ycgN;gene_biotype=protein_coding;locus_tag=PHA55_RS10285;old_locus_tag=PHA55_10280
NZ_CP116044.1	Protein Homology	CDS	2121291	2121737	.	+	0	ID=cds-WP_001306825.1;Parent=gene-PHA55_RS10285;Dbxref=Genbank:WP_001306825.1;Name=WP_001306825.1;gbkey=CDS;gene=ycgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309703.5;locus_tag=PHA55_RS10285;product=YcgN family cysteine cluster protein;protein_id=WP_001306825.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2121944	2122855	.	-	.	ID=gene-PHA55_RS10290;Name=hlyE;gbkey=Gene;gene=hlyE;gene_biotype=protein_coding;locus_tag=PHA55_RS10290;old_locus_tag=PHA55_10285
NZ_CP116044.1	Protein Homology	CDS	2121944	2122855	.	-	0	ID=cds-WP_001306826.1;Parent=gene-PHA55_RS10290;Dbxref=Genbank:WP_001306826.1;Name=WP_001306826.1;gbkey=CDS;gene=hlyE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415700.4;locus_tag=PHA55_RS10290;product=hemolysin HlyE;protein_id=WP_001306826.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2123228	2123647	.	+	.	ID=gene-PHA55_RS10295;Name=umuD;gbkey=Gene;gene=umuD;gene_biotype=protein_coding;locus_tag=PHA55_RS10295;old_locus_tag=PHA55_10290
NZ_CP116044.1	Protein Homology	CDS	2123228	2123647	.	+	0	ID=cds-WP_000897378.1;Parent=gene-PHA55_RS10295;Dbxref=Genbank:WP_000897378.1;Name=WP_000897378.1;gbkey=CDS;gene=umuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309705.1;locus_tag=PHA55_RS10295;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_000897378.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2123647	2124915	.	+	.	ID=gene-PHA55_RS10300;Name=umuC;gbkey=Gene;gene=umuC;gene_biotype=protein_coding;locus_tag=PHA55_RS10300;old_locus_tag=PHA55_10295
NZ_CP116044.1	Protein Homology	CDS	2123647	2124915	.	+	0	ID=cds-WP_000457616.1;Parent=gene-PHA55_RS10300;Dbxref=Genbank:WP_000457616.1;Name=WP_000457616.1;gbkey=CDS;gene=umuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415702.1;locus_tag=PHA55_RS10300;product=DNA polymerase V catalytic protein;protein_id=WP_000457616.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2124961	2125491	.	-	.	ID=gene-PHA55_RS10305;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=PHA55_RS10305;old_locus_tag=PHA55_10300
NZ_CP116044.1	Protein Homology	CDS	2124961	2125491	.	-	0	ID=cds-WP_000943459.1;Parent=gene-PHA55_RS10305;Dbxref=Genbank:WP_000943459.1;Name=WP_000943459.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309707.1;locus_tag=PHA55_RS10305;product=disulfide bond formation protein DsbB;protein_id=WP_000943459.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2125637	2127178	.	-	.	ID=gene-PHA55_RS10310;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=PHA55_RS10310;old_locus_tag=PHA55_10305
NZ_CP116044.1	Protein Homology	CDS	2125637	2127178	.	-	0	ID=cds-WP_000406391.1;Parent=gene-PHA55_RS10310;Dbxref=Genbank:WP_000406391.1;Name=WP_000406391.1;Ontology_term=GO:0006814,GO:1902600,GO:0015385;gbkey=CDS;gene=nhaB;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309708.1;locus_tag=PHA55_RS10310;product=Na(+)/H(+) antiporter NhaB;protein_id=WP_000406391.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2127400	2128119	.	+	.	ID=gene-PHA55_RS10315;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=PHA55_RS10315;old_locus_tag=PHA55_10310
NZ_CP116044.1	Protein Homology	CDS	2127400	2128119	.	+	0	ID=cds-WP_000234823.1;Parent=gene-PHA55_RS10315;Dbxref=Genbank:WP_000234823.1;Name=WP_000234823.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309709.1;locus_tag=PHA55_RS10315;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_000234823.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2128171	2129703	.	-	.	ID=gene-PHA55_RS10320;Name=ycgB;gbkey=Gene;gene=ycgB;gene_biotype=protein_coding;locus_tag=PHA55_RS10320;old_locus_tag=PHA55_10315
NZ_CP116044.1	Protein Homology	CDS	2128171	2129703	.	-	0	ID=cds-WP_000190854.1;Parent=gene-PHA55_RS10320;Dbxref=Genbank:WP_000190854.1;Name=WP_000190854.1;gbkey=CDS;gene=ycgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415706.1;locus_tag=PHA55_RS10320;product=SpoVR family protein;protein_id=WP_000190854.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2130033	2131331	.	+	.	ID=gene-PHA55_RS10325;Name=dadA;gbkey=Gene;gene=dadA;gene_biotype=protein_coding;locus_tag=PHA55_RS10325;old_locus_tag=PHA55_10320
NZ_CP116044.1	Protein Homology	CDS	2130033	2131331	.	+	0	ID=cds-WP_001266908.1;Parent=gene-PHA55_RS10325;Dbxref=Genbank:WP_001266908.1;Name=WP_001266908.1;gbkey=CDS;gene=dadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309711.1;locus_tag=PHA55_RS10325;product=D-amino acid dehydrogenase;protein_id=WP_001266908.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2131341	2132411	.	+	.	ID=gene-PHA55_RS10330;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=PHA55_RS10330;old_locus_tag=PHA55_10325
NZ_CP116044.1	Protein Homology	CDS	2131341	2132411	.	+	0	ID=cds-WP_000197840.1;Parent=gene-PHA55_RS10330;Dbxref=Genbank:WP_000197840.1;Name=WP_000197840.1;Ontology_term=GO:0006522,GO:0008784;gbkey=CDS;gene=dadX;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309712.2;locus_tag=PHA55_RS10330;product=catabolic alanine racemase DadX;protein_id=WP_000197840.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2132797	2134533	.	-	.	ID=gene-PHA55_RS10335;Name=cvrA;gbkey=Gene;gene=cvrA;gene_biotype=protein_coding;locus_tag=PHA55_RS10335;old_locus_tag=PHA55_10330
NZ_CP116044.1	Protein Homology	CDS	2132797	2134533	.	-	0	ID=cds-WP_000340206.1;Parent=gene-PHA55_RS10335;Dbxref=Genbank:WP_000340206.1;Name=WP_000340206.1;Ontology_term=GO:0006813,GO:0006884,GO:0055085,GO:0051139,GO:0016020;gbkey=CDS;gene=cvrA;go_component=membrane|0016020||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA,cell volume homeostasis|0006884||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309713.2;locus_tag=PHA55_RS10335;product=potassium/proton antiporter;protein_id=WP_000340206.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2134628	2135542	.	-	.	ID=gene-PHA55_RS10340;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=PHA55_RS10340;old_locus_tag=PHA55_10335
NZ_CP116044.1	Protein Homology	CDS	2134628	2135542	.	-	0	ID=cds-WP_000051548.1;Parent=gene-PHA55_RS10340;Dbxref=Genbank:WP_000051548.1;Name=WP_000051548.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415710.1;locus_tag=PHA55_RS10340;product=muramoyltetrapeptide carboxypeptidase;protein_id=WP_000051548.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2135642	2136253	.	+	.	ID=gene-PHA55_RS10345;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=protein_coding;locus_tag=PHA55_RS10345;old_locus_tag=PHA55_10340
NZ_CP116044.1	Protein Homology	CDS	2135642	2136253	.	+	0	ID=cds-WP_001295616.1;Parent=gene-PHA55_RS10345;Dbxref=Genbank:WP_001295616.1;Name=WP_001295616.1;gbkey=CDS;gene=emtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309714.2;locus_tag=PHA55_RS10345;product=membrane-bound lytic murein transglycosylase EmtA;protein_id=WP_001295616.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2136255	2136989	.	-	.	ID=gene-PHA55_RS10350;Name=ycgR;gbkey=Gene;gene=ycgR;gene_biotype=protein_coding;locus_tag=PHA55_RS10350;old_locus_tag=PHA55_10345
NZ_CP116044.1	Protein Homology	CDS	2136255	2136989	.	-	0	ID=cds-WP_000020161.1;Parent=gene-PHA55_RS10350;Dbxref=Genbank:WP_000020161.1;Name=WP_000020161.1;gbkey=CDS;gene=ycgR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415712.1;locus_tag=PHA55_RS10350;product=flagellar brake protein;protein_id=WP_000020161.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2137190	2137444	.	+	.	ID=gene-PHA55_RS10355;Name=ymgE;gbkey=Gene;gene=ymgE;gene_biotype=protein_coding;locus_tag=PHA55_RS10355;old_locus_tag=PHA55_10350
NZ_CP116044.1	Protein Homology	CDS	2137190	2137444	.	+	0	ID=cds-WP_000511313.1;Parent=gene-PHA55_RS10355;Dbxref=Genbank:WP_000511313.1;Name=WP_000511313.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ymgE;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309719.1;locus_tag=PHA55_RS10355;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000511313.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2137622	2138062	.	+	.	ID=gene-PHA55_RS10360;Name=ycgY;gbkey=Gene;gene=ycgY;gene_biotype=protein_coding;locus_tag=PHA55_RS10360;old_locus_tag=PHA55_10355
NZ_CP116044.1	Protein Homology	CDS	2137622	2138062	.	+	0	ID=cds-WP_000615067.1;Parent=gene-PHA55_RS10360;Dbxref=Genbank:WP_000615067.1;Name=WP_000615067.1;gbkey=CDS;gene=ycgY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415714.1;locus_tag=PHA55_RS10360;product=protein YcgY;protein_id=WP_000615067.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2138141	2139838	.	-	.	ID=gene-PHA55_RS10365;Name=treA;gbkey=Gene;gene=treA;gene_biotype=protein_coding;locus_tag=PHA55_RS10365;old_locus_tag=PHA55_10360
NZ_CP116044.1	Protein Homology	CDS	2138141	2139838	.	-	0	ID=cds-WP_000841714.1;Parent=gene-PHA55_RS10365;Dbxref=Genbank:WP_000841714.1;Name=WP_000841714.1;gbkey=CDS;gene=treA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415715.1;locus_tag=PHA55_RS10365;product=alpha%2Calpha-trehalase;protein_id=WP_000841714.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2140158	2141576	.	-	.	ID=gene-PHA55_RS10370;Name=dhaM;gbkey=Gene;gene=dhaM;gene_biotype=protein_coding;locus_tag=PHA55_RS10370;old_locus_tag=PHA55_10365
NZ_CP116044.1	Protein Homology	CDS	2140158	2141576	.	-	0	ID=cds-WP_001317008.1;Parent=gene-PHA55_RS10370;Dbxref=Genbank:WP_001317008.1;Name=WP_001317008.1;Ontology_term=GO:0009401,GO:0016310,GO:0019563,GO:0047324,GO:0016020;gbkey=CDS;gene=dhaM;go_component=membrane|0016020||IEA;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA,glycerol catabolic process|0019563||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415716.4;locus_tag=PHA55_RS10370;product=dihydroxyacetone kinase phosphoryl donor subunit DhaM;protein_id=WP_001317008.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2141587	2142219	.	-	.	ID=gene-PHA55_RS10375;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=PHA55_RS10375;old_locus_tag=PHA55_10370
NZ_CP116044.1	Protein Homology	CDS	2141587	2142219	.	-	0	ID=cds-WP_001297535.1;Parent=gene-PHA55_RS10375;Dbxref=Genbank:WP_001297535.1;Name=WP_001297535.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaL;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415717.1;locus_tag=PHA55_RS10375;product=dihydroxyacetone kinase subunit DhaL;protein_id=WP_001297535.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2142230	2143300	.	-	.	ID=gene-PHA55_RS10380;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;locus_tag=PHA55_RS10380;old_locus_tag=PHA55_10375
NZ_CP116044.1	Protein Homology	CDS	2142230	2143300	.	-	0	ID=cds-WP_000733725.1;Parent=gene-PHA55_RS10380;Dbxref=Genbank:WP_000733725.1;Name=WP_000733725.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaK;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415718.6;locus_tag=PHA55_RS10380;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_000733725.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2143528	2145447	.	+	.	ID=gene-PHA55_RS10385;Name=dhaR;gbkey=Gene;gene=dhaR;gene_biotype=protein_coding;locus_tag=PHA55_RS10385;old_locus_tag=PHA55_10380
NZ_CP116044.1	Protein Homology	CDS	2143528	2145447	.	+	0	ID=cds-WP_001295618.1;Parent=gene-PHA55_RS10385;Dbxref=Genbank:WP_001295618.1;Name=WP_001295618.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=dhaR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415719.2;locus_tag=PHA55_RS10385;product=dihydroxyacetone kinase operon transcriptional regulator DhaR;protein_id=WP_001295618.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2145547	2148414	.	-	.	ID=gene-PHA55_RS10390;Name=ycgV;gbkey=Gene;gene=ycgV;gene_biotype=protein_coding;locus_tag=PHA55_RS10390;old_locus_tag=PHA55_10385
NZ_CP116044.1	Protein Homology	CDS	2145547	2148414	.	-	0	ID=cds-WP_001345607.1;Parent=gene-PHA55_RS10390;Dbxref=Genbank:WP_001345607.1;Name=WP_001345607.1;Ontology_term=GO:0046819,GO:0015474,GO:0009279;gbkey=CDS;gene=ycgV;go_component=cell outer membrane|0009279||IEA;go_function=autotransporter activity|0015474||IEA;go_process=protein secretion by the type V secretion system|0046819||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415720.1;locus_tag=PHA55_RS10390;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_001345607.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2149183	2150274	.	-	.	ID=gene-PHA55_RS10395;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=PHA55_RS10395;old_locus_tag=PHA55_10390
NZ_CP116044.1	Protein Homology	CDS	2149183	2150274	.	-	0	ID=cds-WP_000505866.1;Parent=gene-PHA55_RS10395;Dbxref=Genbank:WP_000505866.1;Name=WP_000505866.1;Ontology_term=GO:0005525;gbkey=CDS;gene=ychF;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=PHA55_RS10395;product=redox-regulated ATPase YchF;protein_id=WP_000505866.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2150391	2150975	.	-	.	ID=gene-PHA55_RS10400;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=PHA55_RS10400;old_locus_tag=PHA55_10395
NZ_CP116044.1	Protein Homology	CDS	2150391	2150975	.	-	0	ID=cds-WP_166431127.1;Parent=gene-PHA55_RS10400;Dbxref=Genbank:WP_166431127.1;Name=WP_166431127.1;Ontology_term=GO:0006412,GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910438.1;locus_tag=PHA55_RS10400;product=aminoacyl-tRNA hydrolase;protein_id=WP_166431127.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2151253	2151531	.	+	.	ID=gene-PHA55_RS10405;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=PHA55_RS10405;old_locus_tag=PHA55_10400
NZ_CP116044.1	Protein Homology	CDS	2151253	2151531	.	+	0	ID=cds-WP_000823885.1;Parent=gene-PHA55_RS10405;Dbxref=Genbank:WP_000823885.1;Name=WP_000823885.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309737.1;locus_tag=PHA55_RS10405;product=stress-induced protein YchH;protein_id=WP_000823885.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2151586	2153265	.	-	.	ID=gene-PHA55_RS10410;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=PHA55_RS10410;old_locus_tag=PHA55_10405
NZ_CP116044.1	Protein Homology	CDS	2151586	2153265	.	-	0	ID=cds-WP_001033352.1;Parent=gene-PHA55_RS10410;Dbxref=Genbank:WP_001033352.1;Name=WP_001033352.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415724.2;locus_tag=PHA55_RS10410;product=C4-dicarboxylic acid transporter DauA;protein_id=WP_001033352.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2153390	2154337	.	-	.	ID=gene-PHA55_RS10415;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=PHA55_RS10415;old_locus_tag=PHA55_10410
NZ_CP116044.1	Protein Homology	CDS	2153390	2154337	.	-	0	ID=cds-WP_001298109.1;Parent=gene-PHA55_RS10415;Dbxref=Genbank:WP_001298109.1;Name=WP_001298109.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=PHA55_RS10415;product=ribose-phosphate diphosphokinase;protein_id=WP_001298109.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2154488	2155339	.	-	.	ID=gene-PHA55_RS10420;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=PHA55_RS10420;old_locus_tag=PHA55_10415
NZ_CP116044.1	Protein Homology	CDS	2154488	2155339	.	-	0	ID=cds-WP_001260314.1;Parent=gene-PHA55_RS10420;Dbxref=Genbank:WP_001260314.1;Name=WP_001260314.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707117.1;locus_tag=PHA55_RS10420;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_001260314.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2155339	2155962	.	-	.	ID=gene-PHA55_RS10425;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=PHA55_RS10425;old_locus_tag=PHA55_10420
NZ_CP116044.1	Protein Homology	CDS	2155339	2155962	.	-	0	ID=cds-WP_001130692.1;Parent=gene-PHA55_RS10425;Dbxref=Genbank:WP_001130692.1;Name=WP_001130692.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolB;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309741.1;locus_tag=PHA55_RS10425;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_001130692.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2156176	2157432	.	+	.	ID=gene-PHA55_RS10430;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=PHA55_RS10430;old_locus_tag=PHA55_10425
NZ_CP116044.1	Protein Homology	CDS	2156176	2157432	.	+	0	ID=cds-WP_000173200.1;Parent=gene-PHA55_RS10430;Dbxref=Genbank:WP_000173200.1;Name=WP_000173200.1;Ontology_term=GO:0006779,GO:0008883,GO:0005737;gbkey=CDS;gene=hemA;go_component=cytoplasm|0005737||IEA;go_function=glutamyl-tRNA reductase activity|0008883||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041689438.1;locus_tag=PHA55_RS10430;product=glutamyl-tRNA reductase;protein_id=WP_000173200.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2157474	2158556	.	+	.	ID=gene-PHA55_RS10435;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=PHA55_RS10435;old_locus_tag=PHA55_10430
NZ_CP116044.1	Protein Homology	CDS	2157474	2158556	.	+	0	ID=cds-WP_000804726.1;Parent=gene-PHA55_RS10435;Dbxref=Genbank:WP_000804726.1;Name=WP_000804726.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=PHA55_RS10435;product=peptide chain release factor 1;protein_id=WP_000804726.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2158556	2159389	.	+	.	ID=gene-PHA55_RS10440;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=PHA55_RS10440;old_locus_tag=PHA55_10435
NZ_CP116044.1	Protein Homology	CDS	2158556	2159389	.	+	0	ID=cds-WP_000456571.1;Parent=gene-PHA55_RS10440;Dbxref=Genbank:WP_000456571.1;Name=WP_000456571.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415730.1;locus_tag=PHA55_RS10440;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_000456571.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2159386	2159778	.	+	.	ID=gene-PHA55_RS10445;Name=sirB2;gbkey=Gene;gene=sirB2;gene_biotype=protein_coding;locus_tag=PHA55_RS10445;old_locus_tag=PHA55_10440
NZ_CP116044.1	Protein Homology	CDS	2159386	2159778	.	+	0	ID=cds-WP_000200392.1;Parent=gene-PHA55_RS10445;Dbxref=Genbank:WP_000200392.1;Name=WP_000200392.1;gbkey=CDS;gene=sirB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707122.1;locus_tag=PHA55_RS10445;product=invasion regulator SirB2;protein_id=WP_000200392.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2159782	2160591	.	+	.	ID=gene-PHA55_RS10450;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=PHA55_RS10450;old_locus_tag=PHA55_10445
NZ_CP116044.1	Protein Homology	CDS	2159782	2160591	.	+	0	ID=cds-WP_001257044.1;Parent=gene-PHA55_RS10450;Dbxref=Genbank:WP_001257044.1;Name=WP_001257044.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309746.1;locus_tag=PHA55_RS10450;product=invasion regulator SirB1;protein_id=WP_001257044.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2160627	2161481	.	+	.	ID=gene-PHA55_RS10455;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=PHA55_RS10455;old_locus_tag=PHA55_10450
NZ_CP116044.1	Protein Homology	CDS	2160627	2161481	.	+	0	ID=cds-WP_000811065.1;Parent=gene-PHA55_RS10455;Dbxref=Genbank:WP_000811065.1;Name=WP_000811065.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126202.1;locus_tag=PHA55_RS10455;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_000811065.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2161630	2161737	.	-	.	ID=gene-PHA55_RS10460;Name=PHA55_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS10460;old_locus_tag=PHA55_10455
NZ_CP116044.1	Protein Homology	CDS	2161630	2161737	.	-	0	ID=cds-WP_176258838.1;Parent=gene-PHA55_RS10460;Dbxref=Genbank:WP_176258838.1;Name=WP_176258838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502614.1;locus_tag=PHA55_RS10460;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_176258838.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2162165	2162272	.	-	.	ID=gene-PHA55_RS10465;Name=PHA55_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS10465;old_locus_tag=PHA55_10460
NZ_CP116044.1	Protein Homology	CDS	2162165	2162272	.	-	0	ID=cds-WP_000170926.1;Parent=gene-PHA55_RS10465;Dbxref=Genbank:WP_000170926.1;Name=WP_000170926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502614.1;locus_tag=PHA55_RS10465;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000170926.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2162701	2162808	.	-	.	ID=gene-PHA55_RS10470;Name=PHA55_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS10470;old_locus_tag=PHA55_10465
NZ_CP116044.1	Protein Homology	CDS	2162701	2162808	.	-	0	ID=cds-WP_000170965.1;Parent=gene-PHA55_RS10470;Dbxref=Genbank:WP_000170965.1;Name=WP_000170965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025297.1;locus_tag=PHA55_RS10470;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000170965.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2163213	2164313	.	-	.	ID=gene-PHA55_RS10475;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=PHA55_RS10475;old_locus_tag=PHA55_10470
NZ_CP116044.1	Protein Homology	CDS	2163213	2164313	.	-	0	ID=cds-WP_001295620.1;Parent=gene-PHA55_RS10475;Dbxref=Genbank:WP_001295620.1;Name=WP_001295620.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309748.1;locus_tag=PHA55_RS10475;product=sodium-potassium/proton antiporter ChaA;protein_id=WP_001295620.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2164583	2164813	.	+	.	ID=gene-PHA55_RS10480;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=PHA55_RS10480;old_locus_tag=PHA55_10475
NZ_CP116044.1	Protein Homology	CDS	2164583	2164813	.	+	0	ID=cds-WP_001146442.1;Parent=gene-PHA55_RS10480;Dbxref=Genbank:WP_001146442.1;Name=WP_001146442.1;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309749.1;locus_tag=PHA55_RS10480;product=putative cation transport regulator ChaB;protein_id=WP_001146442.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2164971	2165666	.	+	.	ID=gene-PHA55_RS10485;Name=chaC;gbkey=Gene;gene=chaC;gene_biotype=protein_coding;locus_tag=PHA55_RS10485;old_locus_tag=PHA55_10480
NZ_CP116044.1	Protein Homology	CDS	2164971	2165666	.	+	0	ID=cds-WP_001355927.1;Parent=gene-PHA55_RS10485;Dbxref=Genbank:WP_001355927.1;Name=WP_001355927.1;gbkey=CDS;gene=chaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415736.2;locus_tag=PHA55_RS10485;product=glutathione-specific gamma-glutamylcyclotransferase;protein_id=WP_001355927.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2165710	2166063	.	-	.	ID=gene-PHA55_RS10490;Name=ychN;gbkey=Gene;gene=ychN;gene_biotype=protein_coding;locus_tag=PHA55_RS10490;old_locus_tag=PHA55_10485
NZ_CP116044.1	Protein Homology	CDS	2165710	2166063	.	-	0	ID=cds-WP_001169669.1;Parent=gene-PHA55_RS10490;Dbxref=Genbank:WP_001169669.1;Name=WP_001169669.1;gbkey=CDS;gene=ychN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309751.1;locus_tag=PHA55_RS10490;product=DsrE/F sulfur relay family protein YchN;protein_id=WP_001169669.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2166248	2167642	.	+	.	ID=gene-PHA55_RS10495;Name=ychO;gbkey=Gene;gene=ychO;gene_biotype=protein_coding;gene_synonym=iatA;locus_tag=PHA55_RS10495;old_locus_tag=PHA55_10490
NZ_CP116044.1	Protein Homology	CDS	2166248	2167642	.	+	0	ID=cds-WP_000086213.1;Parent=gene-PHA55_RS10495;Dbxref=Genbank:WP_000086213.1;Name=WP_000086213.1;gbkey=CDS;gene=ychO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415738.2;locus_tag=PHA55_RS10495;product=inverse autotransporter invasin YchO;protein_id=WP_000086213.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2167643	2168293	.	-	.	ID=gene-PHA55_RS10500;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=PHA55_RS10500;old_locus_tag=PHA55_10495
NZ_CP116044.1	Protein Homology	CDS	2167643	2168293	.	-	0	ID=cds-WP_000070491.1;Parent=gene-PHA55_RS10500;Dbxref=Genbank:WP_000070491.1;Name=WP_000070491.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=narL;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309753.1;locus_tag=PHA55_RS10500;product=two-component system response regulator NarL;protein_id=WP_000070491.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2168286	2170082	.	-	.	ID=gene-PHA55_RS10505;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=PHA55_RS10505;old_locus_tag=PHA55_10500
NZ_CP116044.1	Protein Homology	CDS	2168286	2170082	.	-	0	ID=cds-WP_271287549.1;Parent=gene-PHA55_RS10505;Dbxref=Genbank:WP_271287549.1;Name=WP_271287549.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narX;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309754.1;locus_tag=PHA55_RS10505;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=WP_271287549.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2170421	2171812	.	+	.	ID=gene-PHA55_RS10510;Name=narK;gbkey=Gene;gene=narK;gene_biotype=protein_coding;locus_tag=PHA55_RS10510;old_locus_tag=PHA55_10505
NZ_CP116044.1	Protein Homology	CDS	2170421	2171812	.	+	0	ID=cds-WP_000019827.1;Parent=gene-PHA55_RS10510;Dbxref=Genbank:WP_000019827.1;Name=WP_000019827.1;gbkey=CDS;gene=narK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415741.1;locus_tag=PHA55_RS10510;product=nitrate transporter NarK;protein_id=WP_000019827.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2172328	2176071	.	+	.	ID=gene-PHA55_RS10515;Name=narG;gbkey=Gene;gene=narG;gene_biotype=protein_coding;locus_tag=PHA55_RS10515;old_locus_tag=PHA55_10510
NZ_CP116044.1	Protein Homology	CDS	2172328	2176071	.	+	0	ID=cds-WP_000032935.1;Parent=gene-PHA55_RS10515;Dbxref=Genbank:WP_000032935.1;Name=WP_000032935.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;gene=narG;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309756.1;locus_tag=PHA55_RS10515;product=nitrate reductase subunit alpha;protein_id=WP_000032935.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2176068	2177606	.	+	.	ID=gene-PHA55_RS10520;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=PHA55_RS10520;old_locus_tag=PHA55_10515
NZ_CP116044.1	Protein Homology	CDS	2176068	2177606	.	+	0	ID=cds-WP_000702660.1;Parent=gene-PHA55_RS10520;Dbxref=Genbank:WP_000702660.1;Name=WP_000702660.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309757.1;locus_tag=PHA55_RS10520;product=nitrate reductase subunit beta;protein_id=WP_000702660.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2177603	2178313	.	+	.	ID=gene-PHA55_RS10525;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=PHA55_RS10525;old_locus_tag=PHA55_10520
NZ_CP116044.1	Protein Homology	CDS	2177603	2178313	.	+	0	ID=cds-WP_000571699.1;Parent=gene-PHA55_RS10525;Dbxref=Genbank:WP_000571699.1;Name=WP_000571699.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707135.1;locus_tag=PHA55_RS10525;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_000571699.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2178313	2178990	.	+	.	ID=gene-PHA55_RS10530;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=PHA55_RS10530;old_locus_tag=PHA55_10525
NZ_CP116044.1	Protein Homology	CDS	2178313	2178990	.	+	0	ID=cds-WP_001160110.1;Parent=gene-PHA55_RS10530;Dbxref=Genbank:WP_001160110.1;Name=WP_001160110.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309759.1;locus_tag=PHA55_RS10530;product=respiratory nitrate reductase subunit gamma;protein_id=WP_001160110.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2179174	2179305	.	-	.	ID=gene-PHA55_RS10535;Name=PHA55_RS10535;gbkey=Gene;gene_biotype=ncRNA;locus_tag=PHA55_RS10535;old_locus_tag=PHA55_10530
NZ_CP116044.1	cmsearch	ncRNA	2179174	2179305	.	-	.	ID=rna-PHA55_RS10535;Parent=gene-PHA55_RS10535;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS10535;product=RtT sRNA
NZ_CP116044.1	cmsearch	exon	2179174	2179305	.	-	.	ID=exon-PHA55_RS10535-1;Parent=rna-PHA55_RS10535;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS10535;product=RtT sRNA
NZ_CP116044.1	RefSeq	gene	2179352	2179436	.	-	.	ID=gene-PHA55_RS10540;Name=PHA55_RS10540;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS10540;old_locus_tag=PHA55_10535
NZ_CP116044.1	tRNAscan-SE	tRNA	2179352	2179436	.	-	.	ID=rna-PHA55_RS10540;Parent=gene-PHA55_RS10540;anticodon=(pos:complement(2179400..2179402));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS10540;product=tRNA-Tyr
NZ_CP116044.1	tRNAscan-SE	exon	2179352	2179436	.	-	.	ID=exon-PHA55_RS10540-1;Parent=rna-PHA55_RS10540;anticodon=(pos:complement(2179400..2179402));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS10540;product=tRNA-Tyr
NZ_CP116044.1	RefSeq	gene	2179471	2179555	.	-	.	ID=gene-PHA55_RS10545;Name=PHA55_RS10545;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS10545;old_locus_tag=PHA55_10540
NZ_CP116044.1	tRNAscan-SE	tRNA	2179471	2179555	.	-	.	ID=rna-PHA55_RS10545;Parent=gene-PHA55_RS10545;anticodon=(pos:complement(2179519..2179521));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS10545;product=tRNA-Tyr
NZ_CP116044.1	tRNAscan-SE	exon	2179471	2179555	.	-	.	ID=exon-PHA55_RS10545-1;Parent=rna-PHA55_RS10545;anticodon=(pos:complement(2179519..2179521));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS10545;product=tRNA-Tyr
NZ_CP116044.1	RefSeq	gene	2179715	2180557	.	-	.	ID=gene-PHA55_RS10550;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=PHA55_RS10550;old_locus_tag=PHA55_10545
NZ_CP116044.1	Protein Homology	CDS	2179715	2180557	.	-	0	ID=cds-WP_000555849.1;Parent=gene-PHA55_RS10550;Dbxref=Genbank:WP_000555849.1;Name=WP_000555849.1;Ontology_term=GO:0009152,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707138.1;locus_tag=PHA55_RS10550;product=formyltetrahydrofolate deformylase;protein_id=WP_000555849.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2180607	2181065	.	-	.	ID=gene-PHA55_RS10555;Name=ychJ;gbkey=Gene;gene=ychJ;gene_biotype=protein_coding;locus_tag=PHA55_RS10555;old_locus_tag=PHA55_10550
NZ_CP116044.1	Protein Homology	CDS	2180607	2181065	.	-	0	ID=cds-WP_001307143.1;Parent=gene-PHA55_RS10555;Dbxref=Genbank:WP_001307143.1;Name=WP_001307143.1;gbkey=CDS;gene=ychJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415749.1;locus_tag=PHA55_RS10555;product=YchJ family protein;protein_id=WP_001307143.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2181178	2182083	.	+	.	ID=gene-PHA55_RS10560;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;locus_tag=PHA55_RS10560;old_locus_tag=PHA55_10555
NZ_CP116044.1	Protein Homology	CDS	2181178	2182083	.	+	0	ID=cds-WP_001226476.1;Parent=gene-PHA55_RS10560;Dbxref=Genbank:WP_001226476.1;Name=WP_001226476.1;Ontology_term=GO:0006629,GO:0004622;gbkey=CDS;gene=rssA;go_function=lysophospholipase activity|0004622||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707140.2;locus_tag=PHA55_RS10560;product=patatin-like phospholipase RssA;protein_id=WP_001226476.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2182175	2183188	.	+	.	ID=gene-PHA55_RS10565;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=PHA55_RS10565;old_locus_tag=PHA55_10560
NZ_CP116044.1	Protein Homology	CDS	2182175	2183188	.	+	0	ID=cds-WP_000193447.1;Parent=gene-PHA55_RS10565;Dbxref=Genbank:WP_000193447.1;Name=WP_000193447.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309764.1;locus_tag=PHA55_RS10565;product=two-component system response regulator RssB;protein_id=WP_000193447.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2183390	2184298	.	+	.	ID=gene-PHA55_RS10570;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=PHA55_RS10570;old_locus_tag=PHA55_10565
NZ_CP116044.1	Protein Homology	CDS	2183390	2184298	.	+	0	ID=cds-WP_000718995.1;Parent=gene-PHA55_RS10570;Dbxref=Genbank:WP_000718995.1;Name=WP_000718995.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309765.1;locus_tag=PHA55_RS10570;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_000718995.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2184442	2184855	.	-	.	ID=gene-PHA55_RS10575;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=PHA55_RS10575;old_locus_tag=PHA55_10570
NZ_CP116044.1	Protein Homology	CDS	2184442	2184855	.	-	0	ID=cds-WP_001287378.1;Parent=gene-PHA55_RS10575;Dbxref=Genbank:WP_001287378.1;Name=WP_001287378.1;gbkey=CDS;gene=hns;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309766.1;locus_tag=PHA55_RS10575;product=DNA-binding transcriptional regulator H-NS;protein_id=WP_001287378.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2185461	2186078	.	+	.	ID=gene-PHA55_RS10580;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=PHA55_RS10580;old_locus_tag=PHA55_10575
NZ_CP116044.1	Protein Homology	CDS	2185461	2186078	.	+	0	ID=cds-WP_000068079.1;Parent=gene-PHA55_RS10580;Dbxref=Genbank:WP_000068079.1;Name=WP_000068079.1;gbkey=CDS;gene=tdk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309767.1;locus_tag=PHA55_RS10580;product=thymidine kinase;protein_id=WP_000068079.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	2186360	2187260	.	-	.	ID=gene-PHA55_RS10585;Name=PHA55_RS10585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS10585;old_locus_tag=PHA55_10580;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	2186360	2187260	.	-	0	ID=cds-PHA55_RS10585;Parent=gene-PHA55_RS10585;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904641.1;locus_tag=PHA55_RS10585;product=IS4 family transposase;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	2187384	2190059	.	-	.	ID=gene-PHA55_RS10590;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=PHA55_RS10590;old_locus_tag=PHA55_10585
NZ_CP116044.1	Protein Homology	CDS	2187384	2190059	.	-	0	ID=cds-WP_000301651.1;Parent=gene-PHA55_RS10590;Dbxref=Genbank:WP_000301651.1;Name=WP_000301651.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309768.1;locus_tag=PHA55_RS10590;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_000301651.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2190452	2190505	.	+	.	ID=gene-PHA55_RS10595;Name=ychE;gbkey=Gene;gene=ychE;gene_biotype=protein_coding;locus_tag=PHA55_RS10595;old_locus_tag=PHA55_10590
NZ_CP116044.1	Protein Homology	CDS	2190452	2190505	.	+	0	ID=cds-WP_211180492.1;Parent=gene-PHA55_RS10595;Dbxref=Genbank:WP_211180492.1;Name=WP_211180492.1;gbkey=CDS;gene=ychE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051181.1;locus_tag=PHA55_RS10595;product=protein YchT;protein_id=WP_211180492.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2190536	2191183	.	+	.	ID=gene-PHA55_RS10600;Name=ychE;gbkey=Gene;gene=ychE;gene_biotype=protein_coding;locus_tag=PHA55_RS10600;old_locus_tag=PHA55_10595
NZ_CP116044.1	Protein Homology	CDS	2190536	2191183	.	+	0	ID=cds-WP_000616554.1;Parent=gene-PHA55_RS10600;Dbxref=Genbank:WP_000616554.1;Name=WP_000616554.1;gbkey=CDS;gene=ychE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415758.1;locus_tag=PHA55_RS10600;product=NAAT family transporter YchE;protein_id=WP_000616554.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2191340	2191636	.	-	.	ID=gene-PHA55_RS10605;Name=PHA55_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS10605;old_locus_tag=PHA55_10600
NZ_CP116044.1	GeneMarkS-2+	CDS	2191340	2191636	.	-	0	ID=cds-WP_001211521.1;Parent=gene-PHA55_RS10605;Dbxref=Genbank:WP_001211521.1;Name=WP_001211521.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA55_RS10605;product=hypothetical protein;protein_id=WP_001211521.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2191920	2193551	.	+	.	ID=gene-PHA55_RS10610;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=PHA55_RS10610;old_locus_tag=PHA55_10605
NZ_CP116044.1	Protein Homology	CDS	2191920	2193551	.	+	0	ID=cds-WP_001297114.1;Parent=gene-PHA55_RS10610;Dbxref=Genbank:WP_001297114.1;Name=WP_001297114.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707150.2;locus_tag=PHA55_RS10610;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_001297114.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2193637	2194557	.	+	.	ID=gene-PHA55_RS10615;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=PHA55_RS10615;old_locus_tag=PHA55_10610
NZ_CP116044.1	Protein Homology	CDS	2193637	2194557	.	+	0	ID=cds-WP_000911112.1;Parent=gene-PHA55_RS10615;Dbxref=Genbank:WP_000911112.1;Name=WP_000911112.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=PHA55_RS10615;product=oligopeptide ABC transporter permease OppB;protein_id=WP_000911112.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2194572	2195480	.	+	.	ID=gene-PHA55_RS10620;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=PHA55_RS10620;old_locus_tag=PHA55_10615
NZ_CP116044.1	Protein Homology	CDS	2194572	2195480	.	+	0	ID=cds-WP_000979661.1;Parent=gene-PHA55_RS10620;Dbxref=Genbank:WP_000979661.1;Name=WP_000979661.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=PHA55_RS10620;product=oligopeptide ABC transporter permease OppC;protein_id=WP_000979661.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2195492	2196505	.	+	.	ID=gene-PHA55_RS10625;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=PHA55_RS10625;old_locus_tag=PHA55_10620
NZ_CP116044.1	Protein Homology	CDS	2195492	2196505	.	+	0	ID=cds-WP_000110945.1;Parent=gene-PHA55_RS10625;Dbxref=Genbank:WP_000110945.1;Name=WP_000110945.1;gbkey=CDS;gene=oppD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309773.1;locus_tag=PHA55_RS10625;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD;protein_id=WP_000110945.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2196502	2197506	.	+	.	ID=gene-PHA55_RS10630;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=PHA55_RS10630;old_locus_tag=PHA55_10625
NZ_CP116044.1	Protein Homology	CDS	2196502	2197506	.	+	0	ID=cds-WP_000994905.1;Parent=gene-PHA55_RS10630;Dbxref=Genbank:WP_000994905.1;Name=WP_000994905.1;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309774.1;locus_tag=PHA55_RS10630;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF;protein_id=WP_000994905.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2197559	2197888	.	-	.	ID=gene-PHA55_RS10635;Name=yciU;gbkey=Gene;gene=yciU;gene_biotype=protein_coding;locus_tag=PHA55_RS10635;old_locus_tag=PHA55_10630
NZ_CP116044.1	Protein Homology	CDS	2197559	2197888	.	-	0	ID=cds-WP_000366959.1;Parent=gene-PHA55_RS10635;Dbxref=Genbank:WP_000366959.1;Name=WP_000366959.1;gbkey=CDS;gene=yciU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309775.2;locus_tag=PHA55_RS10635;product=HI1450 family dsDNA-mimic protein;protein_id=WP_000366959.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2197923	2199383	.	-	.	ID=gene-PHA55_RS10640;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=PHA55_RS10640;old_locus_tag=PHA55_10635
NZ_CP116044.1	Protein Homology	CDS	2197923	2199383	.	-	0	ID=cds-WP_000214516.1;Parent=gene-PHA55_RS10640;Dbxref=Genbank:WP_000214516.1;Name=WP_000214516.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=PHA55_RS10640;product=cardiolipin synthase;protein_id=WP_000214516.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2199526	2199699	.	+	.	ID=gene-PHA55_RS10645;Name=yciY;gbkey=Gene;gene=yciY;gene_biotype=protein_coding;locus_tag=PHA55_RS10645;old_locus_tag=PHA55_10640
NZ_CP116044.1	Protein Homology	CDS	2199526	2199699	.	+	0	ID=cds-WP_001309467.1;Parent=gene-PHA55_RS10645;Dbxref=Genbank:WP_001309467.1;Name=WP_001309467.1;gbkey=CDS;gene=yciY;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165316.1;locus_tag=PHA55_RS10645;product=YciY family protein;protein_id=WP_001309467.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2199754	2201007	.	-	.	ID=gene-PHA55_RS10650;Name=kch;gbkey=Gene;gene=kch;gene_biotype=protein_coding;locus_tag=PHA55_RS10650;old_locus_tag=PHA55_10645
NZ_CP116044.1	Protein Homology	CDS	2199754	2201007	.	-	0	ID=cds-WP_001299682.1;Parent=gene-PHA55_RS10650;Dbxref=Genbank:WP_001299682.1;Name=WP_001299682.1;gbkey=CDS;gene=kch;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309777.1;locus_tag=PHA55_RS10650;product=voltage-gated potassium channel protein;protein_id=WP_001299682.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2201306	2201602	.	-	.	ID=gene-PHA55_RS10655;Name=yciI;gbkey=Gene;gene=yciI;gene_biotype=protein_coding;locus_tag=PHA55_RS10655;old_locus_tag=PHA55_10650
NZ_CP116044.1	Protein Homology	CDS	2201306	2201602	.	-	0	ID=cds-WP_000967595.1;Parent=gene-PHA55_RS10655;Dbxref=Genbank:WP_000967595.1;Name=WP_000967595.1;gbkey=CDS;gene=yciI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415767.2;locus_tag=PHA55_RS10655;product=YciI family protein;protein_id=WP_000967595.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2201826	2202545	.	+	.	ID=gene-PHA55_RS10660;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=PHA55_RS10660;old_locus_tag=PHA55_10655
NZ_CP116044.1	Protein Homology	CDS	2201826	2202545	.	+	0	ID=cds-WP_000171274.1;Parent=gene-PHA55_RS10660;Dbxref=Genbank:WP_000171274.1;Name=WP_000171274.1;gbkey=CDS;gene=tonB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309779.1;locus_tag=PHA55_RS10660;product=TonB system transport protein TonB;protein_id=WP_000171274.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2202585	2202983	.	-	.	ID=gene-PHA55_RS10665;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=PHA55_RS10665;old_locus_tag=PHA55_10660
NZ_CP116044.1	Protein Homology	CDS	2202585	2202983	.	-	0	ID=cds-WP_000108160.1;Parent=gene-PHA55_RS10665;Dbxref=Genbank:WP_000108160.1;Name=WP_000108160.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415769.1;locus_tag=PHA55_RS10665;product=acyl-CoA thioester hydrolase YciA;protein_id=WP_000108160.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2203088	2203627	.	-	.	ID=gene-PHA55_RS10670;Name=yciB;gbkey=Gene;gene=yciB;gene_biotype=protein_coding;locus_tag=PHA55_RS10670;old_locus_tag=PHA55_10665
NZ_CP116044.1	Protein Homology	CDS	2203088	2203627	.	-	0	ID=cds-WP_000808667.1;Parent=gene-PHA55_RS10670;Dbxref=Genbank:WP_000808667.1;Name=WP_000808667.1;gbkey=CDS;gene=yciB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309781.1;locus_tag=PHA55_RS10670;product=septation protein A;protein_id=WP_000808667.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2203657	2204400	.	-	.	ID=gene-PHA55_RS10675;Name=yciC;gbkey=Gene;gene=yciC;gene_biotype=protein_coding;locus_tag=PHA55_RS10675;old_locus_tag=PHA55_10670
NZ_CP116044.1	Protein Homology	CDS	2203657	2204400	.	-	0	ID=cds-WP_000028540.1;Parent=gene-PHA55_RS10675;Dbxref=Genbank:WP_000028540.1;Name=WP_000028540.1;gbkey=CDS;gene=yciC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415771.1;locus_tag=PHA55_RS10675;product=YciC family protein;protein_id=WP_000028540.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	2204428	2204517	.	-	.	ID=gene-PHA55_RS10680;Name=PHA55_RS10680;end_range=2204517,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS10680;old_locus_tag=PHA55_10675;partial=true;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	2204428	2204517	.	-	0	ID=cds-PHA55_RS10680;Parent=gene-PHA55_RS10680;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2204517,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460692.1;locus_tag=PHA55_RS10680;partial=true;product=YkgJ family cysteine cluster protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	2204757	2205395	.	+	.	ID=gene-PHA55_RS10685;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=PHA55_RS10685;old_locus_tag=PHA55_10680
NZ_CP116044.1	Protein Homology	CDS	2204757	2205395	.	+	0	ID=cds-WP_000737226.1;Parent=gene-PHA55_RS10685;Dbxref=Genbank:WP_000737226.1;Name=WP_000737226.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415772.1;locus_tag=PHA55_RS10685;product=outer membrane protein OmpW;protein_id=WP_000737226.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2205455	2205961	.	-	.	ID=gene-PHA55_RS10690;Name=yciE;gbkey=Gene;gene=yciE;gene_biotype=protein_coding;locus_tag=PHA55_RS10690;old_locus_tag=PHA55_10685
NZ_CP116044.1	Protein Homology	CDS	2205455	2205961	.	-	0	ID=cds-WP_001079509.1;Parent=gene-PHA55_RS10690;Dbxref=Genbank:WP_001079509.1;Name=WP_001079509.1;gbkey=CDS;gene=yciE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309856.1;locus_tag=PHA55_RS10690;product=ferritin-like domain-containing protein;protein_id=WP_001079509.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2206007	2206507	.	-	.	ID=gene-PHA55_RS10695;Name=yciF;gbkey=Gene;gene=yciF;gene_biotype=protein_coding;locus_tag=PHA55_RS10695;old_locus_tag=PHA55_10690
NZ_CP116044.1	Protein Homology	CDS	2206007	2206507	.	-	0	ID=cds-WP_001056491.1;Parent=gene-PHA55_RS10695;Dbxref=Genbank:WP_001056491.1;Name=WP_001056491.1;gbkey=CDS;gene=yciF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309857.1;locus_tag=PHA55_RS10695;product=ferritin-like domain-containing protein;protein_id=WP_001056491.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2206593	2206772	.	-	.	ID=gene-PHA55_RS10700;Name=yciG;gbkey=Gene;gene=yciG;gene_biotype=protein_coding;locus_tag=PHA55_RS10700;old_locus_tag=PHA55_10695
NZ_CP116044.1	Protein Homology	CDS	2206593	2206772	.	-	0	ID=cds-WP_000807651.1;Parent=gene-PHA55_RS10700;Dbxref=Genbank:WP_000807651.1;Name=WP_000807651.1;gbkey=CDS;gene=yciG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309858.2;locus_tag=PHA55_RS10700;product=general stress protein;protein_id=WP_000807651.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2207153	2207959	.	-	.	ID=gene-PHA55_RS10705;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=PHA55_RS10705;old_locus_tag=PHA55_10700
NZ_CP116044.1	Protein Homology	CDS	2207153	2207959	.	-	0	ID=cds-WP_000443069.1;Parent=gene-PHA55_RS10705;Dbxref=Genbank:WP_000443069.1;Name=WP_000443069.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415776.1;locus_tag=PHA55_RS10705;product=tryptophan synthase subunit alpha;protein_id=WP_000443069.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2207959	2209152	.	-	.	ID=gene-PHA55_RS10710;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=PHA55_RS10710;old_locus_tag=PHA55_10705
NZ_CP116044.1	Protein Homology	CDS	2207959	2209152	.	-	0	ID=cds-WP_000209520.1;Parent=gene-PHA55_RS10710;Dbxref=Genbank:WP_000209520.1;Name=WP_000209520.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415777.1;locus_tag=PHA55_RS10710;product=tryptophan synthase subunit beta;protein_id=WP_000209520.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2209164	2210525	.	-	.	ID=gene-PHA55_RS10715;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=PHA55_RS10715;old_locus_tag=PHA55_10710
NZ_CP116044.1	Protein Homology	CDS	2209164	2210525	.	-	0	ID=cds-WP_000983912.1;Parent=gene-PHA55_RS10715;Dbxref=Genbank:WP_000983912.1;Name=WP_000983912.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707171.1;locus_tag=PHA55_RS10715;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WP_000983912.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2210526	2212121	.	-	.	ID=gene-PHA55_RS10720;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=PHA55_RS10720;old_locus_tag=PHA55_10715
NZ_CP116044.1	Protein Homology	CDS	2210526	2212121	.	-	0	ID=cds-WP_000763511.1;Parent=gene-PHA55_RS10720;Dbxref=Genbank:WP_000763511.1;Name=WP_000763511.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=PHA55_RS10720;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;protein_id=WP_000763511.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2212121	2213683	.	-	.	ID=gene-PHA55_RS10725;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=PHA55_RS10725;old_locus_tag=PHA55_10720
NZ_CP116044.1	Protein Homology	CDS	2212121	2213683	.	-	0	ID=cds-WP_001194590.1;Parent=gene-PHA55_RS10725;Dbxref=Genbank:WP_001194590.1;Name=WP_001194590.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415780.1;locus_tag=PHA55_RS10725;product=anthranilate synthase component I;protein_id=WP_001194590.1;transl_table=11
NZ_CP116044.1	cmsearch	sequence_feature	2213705	2213798	.	-	.	ID=id-NZ_CP116044.1:2213705..2213798;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1
NZ_CP116044.1	RefSeq	gene	2213775	2213819	.	-	.	ID=gene-PHA55_RS10730;Name=trpL;gbkey=Gene;gene=trpL;gene_biotype=protein_coding;locus_tag=PHA55_RS10730;old_locus_tag=PHA55_10725
NZ_CP116044.1	Protein Homology	CDS	2213775	2213819	.	-	0	ID=cds-WP_001700591.1;Parent=gene-PHA55_RS10730;Dbxref=Genbank:WP_001700591.1;Name=WP_001700591.1;gbkey=CDS;gene=trpL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309864.1;locus_tag=PHA55_RS10730;product=trp operon leader peptide;protein_id=WP_001700591.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2213957	2214838	.	+	.	ID=gene-PHA55_RS10735;Name=rnm;gbkey=Gene;gene=rnm;gene_biotype=protein_coding;gene_synonym=trpH,yciV;locus_tag=PHA55_RS10735;old_locus_tag=PHA55_10730
NZ_CP116044.1	Protein Homology	CDS	2213957	2214838	.	+	0	ID=cds-WP_001285673.1;Parent=gene-PHA55_RS10735;Dbxref=Genbank:WP_001285673.1;Name=WP_001285673.1;gbkey=CDS;gene=rnm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415782.1;locus_tag=PHA55_RS10735;product=RNase AM;protein_id=WP_001285673.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2214835	2215455	.	+	.	ID=gene-PHA55_RS10740;Name=yciO;gbkey=Gene;gene=yciO;gene_biotype=protein_coding;locus_tag=PHA55_RS10740;old_locus_tag=PHA55_10735
NZ_CP116044.1	Protein Homology	CDS	2214835	2215455	.	+	0	ID=cds-WP_001295575.1;Parent=gene-PHA55_RS10740;Dbxref=Genbank:WP_001295575.1;Name=WP_001295575.1;Ontology_term=GO:0006400,GO:0061710;gbkey=CDS;gene=yciO;go_function=L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=PHA55_RS10740;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_001295575.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2215556	2216428	.	+	.	ID=gene-PHA55_RS10745;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=PHA55_RS10745;old_locus_tag=PHA55_10740
NZ_CP116044.1	Protein Homology	CDS	2215556	2216428	.	+	0	ID=cds-WP_001291216.1;Parent=gene-PHA55_RS10745;Dbxref=Genbank:WP_001291216.1;Name=WP_001291216.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309868.1;locus_tag=PHA55_RS10745;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_001291216.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2216468	2217058	.	-	.	ID=gene-PHA55_RS10750;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=PHA55_RS10750;old_locus_tag=PHA55_10745
NZ_CP116044.1	Protein Homology	CDS	2216468	2217058	.	-	0	ID=cds-WP_001278906.1;Parent=gene-PHA55_RS10750;Dbxref=Genbank:WP_001278906.1;Name=WP_001278906.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415786.1;locus_tag=PHA55_RS10750;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_001278906.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2217055	2217813	.	-	.	ID=gene-PHA55_RS10755;Name=yciK;gbkey=Gene;gene=yciK;gene_biotype=protein_coding;locus_tag=PHA55_RS10755;old_locus_tag=PHA55_10750
NZ_CP116044.1	Protein Homology	CDS	2217055	2217813	.	-	0	ID=cds-WP_000559281.1;Parent=gene-PHA55_RS10755;Dbxref=Genbank:WP_000559281.1;Name=WP_000559281.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yciK;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415787.1;locus_tag=PHA55_RS10755;product=YciK family oxidoreductase;protein_id=WP_000559281.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2218033	2219082	.	+	.	ID=gene-PHA55_RS10760;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=PHA55_RS10760;old_locus_tag=PHA55_10755
NZ_CP116044.1	Protein Homology	CDS	2218033	2219082	.	+	0	ID=cds-WP_000422045.1;Parent=gene-PHA55_RS10760;Dbxref=Genbank:WP_000422045.1;Name=WP_000422045.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415788.1;locus_tag=PHA55_RS10760;product=protease SohB;protein_id=WP_000422045.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2219118	2219369	.	-	.	ID=gene-PHA55_RS10765;Name=yciN;gbkey=Gene;gene=yciN;gene_biotype=protein_coding;locus_tag=PHA55_RS10765;old_locus_tag=PHA55_10760
NZ_CP116044.1	Protein Homology	CDS	2219118	2219369	.	-	0	ID=cds-WP_001031530.1;Parent=gene-PHA55_RS10765;Dbxref=Genbank:WP_001031530.1;Name=WP_001031530.1;gbkey=CDS;gene=yciN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309872.1;locus_tag=PHA55_RS10765;product=YciN family protein;protein_id=WP_001031530.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2219749	2222346	.	+	.	ID=gene-PHA55_RS10770;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=PHA55_RS10770;old_locus_tag=PHA55_10765
NZ_CP116044.1	Protein Homology	CDS	2219749	2222346	.	+	0	ID=cds-WP_001297122.1;Parent=gene-PHA55_RS10770;Dbxref=Genbank:WP_001297122.1;Name=WP_001297122.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=PHA55_RS10770;product=type I DNA topoisomerase;protein_id=WP_001297122.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2222556	2223530	.	+	.	ID=gene-PHA55_RS10775;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=PHA55_RS10775;old_locus_tag=PHA55_10770
NZ_CP116044.1	Protein Homology	CDS	2222556	2223530	.	+	0	ID=cds-WP_000776253.1;Parent=gene-PHA55_RS10775;Dbxref=Genbank:WP_000776253.1;Name=WP_000776253.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=PHA55_RS10775;product=HTH-type transcriptional regulator CysB;protein_id=WP_000776253.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2223849	2223989	.	+	.	ID=gene-PHA55_RS10780;Name=ymiA;gbkey=Gene;gene=ymiA;gene_biotype=protein_coding;locus_tag=PHA55_RS10780;old_locus_tag=PHA55_10775
NZ_CP116044.1	Protein Homology	CDS	2223849	2223989	.	+	0	ID=cds-WP_001300896.1;Parent=gene-PHA55_RS10780;Dbxref=Genbank:WP_001300896.1;Name=WP_001300896.1;gbkey=CDS;gene=ymiA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588449.3;locus_tag=PHA55_RS10780;product=YmiA family putative membrane protein;protein_id=WP_001300896.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2223992	2224159	.	+	.	ID=gene-PHA55_RS10785;Name=yciX;gbkey=Gene;gene=yciX;gene_biotype=protein_coding;locus_tag=PHA55_RS10785;old_locus_tag=PHA55_10780
NZ_CP116044.1	Protein Homology	CDS	2223992	2224159	.	+	0	ID=cds-WP_001297116.1;Parent=gene-PHA55_RS10785;Dbxref=Genbank:WP_001297116.1;Name=WP_001297116.1;gbkey=CDS;gene=yciX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588450.2;locus_tag=PHA55_RS10785;product=protein YciX;protein_id=WP_001297116.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2224273	2224368	.	+	.	ID=gene-PHA55_RS10790;Name=ymiC;gbkey=Gene;gene=ymiC;gene_biotype=protein_coding;locus_tag=PHA55_RS10790;old_locus_tag=PHA55_10785
NZ_CP116044.1	Protein Homology	CDS	2224273	2224368	.	+	0	ID=cds-WP_001310756.1;Parent=gene-PHA55_RS10790;Dbxref=Genbank:WP_001310756.1;Name=WP_001310756.1;gbkey=CDS;gene=ymiC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518771.1;locus_tag=PHA55_RS10790;product=hypothetical protein;protein_id=WP_001310756.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2224532	2227207	.	+	.	ID=gene-PHA55_RS10795;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=PHA55_RS10795;old_locus_tag=PHA55_10790
NZ_CP116044.1	Protein Homology	CDS	2224532	2227207	.	+	0	ID=cds-WP_000099521.1;Parent=gene-PHA55_RS10795;Dbxref=Genbank:WP_000099521.1;Name=WP_000099521.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415792.1;locus_tag=PHA55_RS10795;product=aconitate hydratase AcnA;protein_id=WP_000099521.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2227271	2227861	.	-	.	ID=gene-PHA55_RS10800;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=PHA55_RS10800;old_locus_tag=PHA55_10795
NZ_CP116044.1	Protein Homology	CDS	2227271	2227861	.	-	0	ID=cds-WP_001176295.1;Parent=gene-PHA55_RS10800;Dbxref=Genbank:WP_001176295.1;Name=WP_001176295.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309877.1;locus_tag=PHA55_RS10800;product=GTP cyclohydrolase II;protein_id=WP_001176295.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2228031	2228795	.	+	.	ID=gene-PHA55_RS10805;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=PHA55_RS10805;old_locus_tag=PHA55_10800
NZ_CP116044.1	Protein Homology	CDS	2228031	2228795	.	+	0	ID=cds-WP_001256538.1;Parent=gene-PHA55_RS10805;Dbxref=Genbank:WP_001256538.1;Name=WP_001256538.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309878.1;locus_tag=PHA55_RS10805;product=phosphatidylglycerophosphatase B;protein_id=WP_001256538.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2228944	2229252	.	+	.	ID=gene-PHA55_RS10810;Name=lapA;gbkey=Gene;gene=lapA;gene_biotype=protein_coding;locus_tag=PHA55_RS10810;old_locus_tag=PHA55_10805
NZ_CP116044.1	Protein Homology	CDS	2228944	2229252	.	+	0	ID=cds-WP_000876286.1;Parent=gene-PHA55_RS10810;Dbxref=Genbank:WP_000876286.1;Name=WP_000876286.1;gbkey=CDS;gene=lapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415795.1;locus_tag=PHA55_RS10810;product=lipopolysaccharide assembly protein LapA;protein_id=WP_000876286.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2229259	2230428	.	+	.	ID=gene-PHA55_RS10815;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=PHA55_RS10815;old_locus_tag=PHA55_10810
NZ_CP116044.1	Protein Homology	CDS	2229259	2230428	.	+	0	ID=cds-WP_000891353.1;Parent=gene-PHA55_RS10815;Dbxref=Genbank:WP_000891353.1;Name=WP_000891353.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309880.1;locus_tag=PHA55_RS10815;product=lipopolysaccharide assembly protein LapB;protein_id=WP_000891353.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2230621	2231358	.	+	.	ID=gene-PHA55_RS10820;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=PHA55_RS10820;old_locus_tag=PHA55_10815
NZ_CP116044.1	Protein Homology	CDS	2230621	2231358	.	+	0	ID=cds-WP_000176281.1;Parent=gene-PHA55_RS10820;Dbxref=Genbank:WP_000176281.1;Name=WP_000176281.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707190.1;locus_tag=PHA55_RS10820;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_000176281.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2231358	2231684	.	+	.	ID=gene-PHA55_RS10825;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=PHA55_RS10825;old_locus_tag=PHA55_10820
NZ_CP116044.1	Protein Homology	CDS	2231358	2231684	.	+	0	ID=cds-WP_001362354.1;Parent=gene-PHA55_RS10825;Dbxref=Genbank:WP_001362354.1;Name=WP_001362354.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415798.2;locus_tag=PHA55_RS10825;product=stress response translation initiation inhibitor YciH;protein_id=WP_001362354.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2231810	2232028	.	-	.	ID=gene-PHA55_RS10830;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=PHA55_RS10830;old_locus_tag=PHA55_10825
NZ_CP116044.1	Protein Homology	CDS	2231810	2232028	.	-	0	ID=cds-WP_000498253.1;Parent=gene-PHA55_RS10830;Dbxref=Genbank:WP_000498253.1;Name=WP_000498253.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309883.1;locus_tag=PHA55_RS10830;product=osmotically-inducible lipoprotein OsmB;protein_id=WP_000498253.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2232297	2233046	.	-	.	ID=gene-PHA55_RS10835;Name=yciT;gbkey=Gene;gene=yciT;gene_biotype=protein_coding;locus_tag=PHA55_RS10835;old_locus_tag=PHA55_10830
NZ_CP116044.1	Protein Homology	CDS	2232297	2233046	.	-	0	ID=cds-WP_001088621.1;Parent=gene-PHA55_RS10835;Dbxref=Genbank:WP_001088621.1;Name=WP_001088621.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yciT;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309884.1;locus_tag=PHA55_RS10835;product=DNA-binding transcriptional regulator YciT;protein_id=WP_001088621.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2233136	2233309	.	-	.	ID=gene-PHA55_RS10840;Name=yciZ;gbkey=Gene;gene=yciZ;gene_biotype=protein_coding;locus_tag=PHA55_RS10840;old_locus_tag=PHA55_10835
NZ_CP116044.1	Protein Homology	CDS	2233136	2233309	.	-	0	ID=cds-WP_001288368.1;Parent=gene-PHA55_RS10840;Dbxref=Genbank:WP_001288368.1;Name=WP_001288368.1;gbkey=CDS;gene=yciZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165317.1;locus_tag=PHA55_RS10840;product=protein YciZ;protein_id=WP_001288368.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2233346	2233474	.	+	.	ID=gene-PHA55_RS10845;Name=ymiD;gbkey=Gene;gene=ymiD;gene_biotype=protein_coding;locus_tag=PHA55_RS10845;old_locus_tag=PHA55_10840
NZ_CP116044.1	Protein Homology	CDS	2233346	2233474	.	+	0	ID=cds-WP_211180493.1;Parent=gene-PHA55_RS10845;Dbxref=Genbank:WP_211180493.1;Name=WP_211180493.1;gbkey=CDS;gene=ymiD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051182.1;locus_tag=PHA55_RS10845;product=protein YmiD;protein_id=WP_211180493.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2233456	2235441	.	-	.	ID=gene-PHA55_RS10850;Name=pdeR;gbkey=Gene;gene=pdeR;gene_biotype=protein_coding;locus_tag=PHA55_RS10850;old_locus_tag=PHA55_10845
NZ_CP116044.1	Protein Homology	CDS	2233456	2235441	.	-	0	ID=cds-WP_000859987.1;Parent=gene-PHA55_RS10850;Dbxref=Genbank:WP_000859987.1;Name=WP_000859987.1;gbkey=CDS;gene=pdeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415801.1;locus_tag=PHA55_RS10850;product=cyclic di-GMP phosphodiesterase;protein_id=WP_000859987.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2235495	2235599	.	+	.	ID=gene-PHA55_RS10855;Name=PHA55_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS10855;old_locus_tag=PHA55_10850
NZ_CP116044.1	Protein Homology	CDS	2235495	2235599	.	+	0	ID=cds-WP_000221855.1;Parent=gene-PHA55_RS10855;Dbxref=Genbank:WP_000221855.1;Name=WP_000221855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791239.1;locus_tag=PHA55_RS10855;product=hypothetical protein;protein_id=WP_000221855.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2235677	2237611	.	-	.	ID=gene-PHA55_RS10860;Name=rnb;gbkey=Gene;gene=rnb;gene_biotype=protein_coding;locus_tag=PHA55_RS10860;old_locus_tag=PHA55_10855
NZ_CP116044.1	Protein Homology	CDS	2235677	2237611	.	-	0	ID=cds-WP_000484978.1;Parent=gene-PHA55_RS10860;Dbxref=Genbank:WP_000484978.1;Name=WP_000484978.1;Ontology_term=GO:0006401,GO:0008859;gbkey=CDS;gene=rnb;go_function=exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415802.1;locus_tag=PHA55_RS10860;product=exoribonuclease II;protein_id=WP_000484978.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2237679	2238806	.	-	.	ID=gene-PHA55_RS10865;Name=yciW;gbkey=Gene;gene=yciW;gene_biotype=protein_coding;locus_tag=PHA55_RS10865;old_locus_tag=PHA55_10860
NZ_CP116044.1	Protein Homology	CDS	2237679	2238806	.	-	0	ID=cds-WP_000437858.1;Parent=gene-PHA55_RS10865;Dbxref=Genbank:WP_000437858.1;Name=WP_000437858.1;gbkey=CDS;gene=yciW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309887.2;locus_tag=PHA55_RS10865;product=CMD domain-containing protein;protein_id=WP_000437858.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2238951	2239739	.	-	.	ID=gene-PHA55_RS10870;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=PHA55_RS10870;old_locus_tag=PHA55_10865
NZ_CP116044.1	Protein Homology	CDS	2238951	2239739	.	-	0	ID=cds-WP_000506490.1;Parent=gene-PHA55_RS10870;Dbxref=Genbank:WP_000506490.1;Name=WP_000506490.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=PHA55_RS10870;product=enoyl-ACP reductase FabI;protein_id=WP_000506490.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2240109	2240462	.	-	.	ID=gene-PHA55_RS10875;Name=ycjD;gbkey=Gene;gene=ycjD;gene_biotype=protein_coding;locus_tag=PHA55_RS10875;old_locus_tag=PHA55_10870
NZ_CP116044.1	Protein Homology	CDS	2240109	2240462	.	-	0	ID=cds-WP_000968857.1;Parent=gene-PHA55_RS10875;Dbxref=Genbank:WP_000968857.1;Name=WP_000968857.1;gbkey=CDS;gene=ycjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415805.1;locus_tag=PHA55_RS10875;product=DUF559 domain-containing protein;protein_id=WP_000968857.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2240530	2241336	.	-	.	ID=gene-PHA55_RS10880;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=PHA55_RS10880;old_locus_tag=PHA55_10875
NZ_CP116044.1	Protein Homology	CDS	2240530	2241336	.	-	0	ID=cds-WP_000573407.1;Parent=gene-PHA55_RS10880;Dbxref=Genbank:WP_000573407.1;Name=WP_000573407.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415806.1;locus_tag=PHA55_RS10880;product=peptide ABC transporter ATP-binding protein SapF;protein_id=WP_000573407.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2241338	2242330	.	-	.	ID=gene-PHA55_RS10885;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=PHA55_RS10885;old_locus_tag=PHA55_10880
NZ_CP116044.1	Protein Homology	CDS	2241338	2242330	.	-	0	ID=cds-WP_001128858.1;Parent=gene-PHA55_RS10885;Dbxref=Genbank:WP_001128858.1;Name=WP_001128858.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309895.1;locus_tag=PHA55_RS10885;product=peptide ABC transporter ATP-binding protein SapD;protein_id=WP_001128858.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2242330	2243220	.	-	.	ID=gene-PHA55_RS10890;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=PHA55_RS10890;old_locus_tag=PHA55_10885
NZ_CP116044.1	Protein Homology	CDS	2242330	2243220	.	-	0	ID=cds-WP_001146163.1;Parent=gene-PHA55_RS10890;Dbxref=Genbank:WP_001146163.1;Name=WP_001146163.1;gbkey=CDS;gene=sapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415808.1;locus_tag=PHA55_RS10890;product=peptide ABC transporter permease SapC;protein_id=WP_001146163.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2243207	2244172	.	-	.	ID=gene-PHA55_RS10895;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=PHA55_RS10895;old_locus_tag=PHA55_10890
NZ_CP116044.1	Protein Homology	CDS	2243207	2244172	.	-	0	ID=cds-WP_000583277.1;Parent=gene-PHA55_RS10895;Dbxref=Genbank:WP_000583277.1;Name=WP_000583277.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=sapB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=PHA55_RS10895;product=putrescine ABC transporter permease SapB;protein_id=WP_000583277.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2244169	2245812	.	-	.	ID=gene-PHA55_RS10900;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=PHA55_RS10900;old_locus_tag=PHA55_10895
NZ_CP116044.1	Protein Homology	CDS	2244169	2245812	.	-	0	ID=cds-WP_001250208.1;Parent=gene-PHA55_RS10900;Dbxref=Genbank:WP_001250208.1;Name=WP_001250208.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=sapA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415810.1;locus_tag=PHA55_RS10900;product=peptide ABC transporter substrate-binding protein SapA;protein_id=WP_001250208.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2246125	2246370	.	-	.	ID=gene-PHA55_RS10905;Name=ymjA;gbkey=Gene;gene=ymjA;gene_biotype=protein_coding;locus_tag=PHA55_RS10905;old_locus_tag=PHA55_10900
NZ_CP116044.1	Protein Homology	CDS	2246125	2246370	.	-	0	ID=cds-WP_104726646.1;Parent=gene-PHA55_RS10905;Dbxref=Genbank:WP_104726646.1;Name=WP_104726646.1;gbkey=CDS;gene=ymjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415811.1;locus_tag=PHA55_RS10905;product=YmjA family protein;protein_id=WP_104726646.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2246504	2247889	.	-	.	ID=gene-PHA55_RS10910;Name=puuP;gbkey=Gene;gene=puuP;gene_biotype=protein_coding;locus_tag=PHA55_RS10910;old_locus_tag=PHA55_10905
NZ_CP116044.1	Protein Homology	CDS	2246504	2247889	.	-	0	ID=cds-WP_000996858.1;Parent=gene-PHA55_RS10910;Dbxref=Genbank:WP_000996858.1;Name=WP_000996858.1;gbkey=CDS;gene=puuP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707205.2;locus_tag=PHA55_RS10910;product=putrescine/proton symporter PuuP;protein_id=WP_000996858.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2247879	2248043	.	-	.	ID=gene-PHA55_RS10915;Name=PHA55_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS10915;old_locus_tag=PHA55_10910
NZ_CP116044.1	Protein Homology	CDS	2247879	2248043	.	-	0	ID=cds-WP_120795382.1;Parent=gene-PHA55_RS10915;Dbxref=Genbank:WP_120795382.1;Name=WP_120795382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518772.1;locus_tag=PHA55_RS10915;product=protein YmjE;protein_id=WP_120795382.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2248192	2249610	.	-	.	ID=gene-PHA55_RS10920;Name=puuA;gbkey=Gene;gene=puuA;gene_biotype=protein_coding;locus_tag=PHA55_RS10920;old_locus_tag=PHA55_10915
NZ_CP116044.1	Protein Homology	CDS	2248192	2249610	.	-	0	ID=cds-WP_001298814.1;Parent=gene-PHA55_RS10920;Dbxref=Genbank:WP_001298814.1;Name=WP_001298814.1;gbkey=CDS;gene=puuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309901.2;locus_tag=PHA55_RS10920;product=glutamate-putrescine ligase;protein_id=WP_001298814.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2249822	2250586	.	+	.	ID=gene-PHA55_RS10925;Name=puuD;gbkey=Gene;gene=puuD;gene_biotype=protein_coding;locus_tag=PHA55_RS10925;old_locus_tag=PHA55_10920
NZ_CP116044.1	Protein Homology	CDS	2249822	2250586	.	+	0	ID=cds-WP_001300506.1;Parent=gene-PHA55_RS10925;Dbxref=Genbank:WP_001300506.1;Name=WP_001300506.1;Ontology_term=GO:0016787;gbkey=CDS;gene=puuD;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415814.4;locus_tag=PHA55_RS10925;product=gamma-glutamyl-gamma-aminobutyrate hydrolase;protein_id=WP_001300506.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2250613	2251170	.	+	.	ID=gene-PHA55_RS10930;Name=puuR;gbkey=Gene;gene=puuR;gene_biotype=protein_coding;locus_tag=PHA55_RS10930;old_locus_tag=PHA55_10925
NZ_CP116044.1	Protein Homology	CDS	2250613	2251170	.	+	0	ID=cds-WP_001278727.1;Parent=gene-PHA55_RS10930;Dbxref=Genbank:WP_001278727.1;Name=WP_001278727.1;gbkey=CDS;gene=puuR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001464354.1;locus_tag=PHA55_RS10930;product=HTH-type transcriptional regulator PuuR;protein_id=WP_001278727.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2251445	2252932	.	+	.	ID=gene-PHA55_RS10935;Name=puuC;gbkey=Gene;gene=puuC;gene_biotype=protein_coding;locus_tag=PHA55_RS10935;old_locus_tag=PHA55_10930
NZ_CP116044.1	Protein Homology	CDS	2251445	2252932	.	+	0	ID=cds-WP_024243344.1;Parent=gene-PHA55_RS10935;Dbxref=Genbank:WP_024243344.1;Name=WP_024243344.1;Ontology_term=GO:0016620;gbkey=CDS;gene=puuC;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415816.1;locus_tag=PHA55_RS10935;product=aldehyde dehydrogenase PuuC;protein_id=WP_024243344.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2252934	2254214	.	+	.	ID=gene-PHA55_RS10940;Name=puuB;gbkey=Gene;gene=puuB;gene_biotype=protein_coding;locus_tag=PHA55_RS10940;old_locus_tag=PHA55_10935
NZ_CP116044.1	Protein Homology	CDS	2252934	2254214	.	+	0	ID=cds-WP_000134868.1;Parent=gene-PHA55_RS10940;Dbxref=Genbank:WP_000134868.1;Name=WP_000134868.1;gbkey=CDS;gene=puuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415817.1;locus_tag=PHA55_RS10940;product=gamma-glutamylputrescine oxidase;protein_id=WP_000134868.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2254252	2255517	.	+	.	ID=gene-PHA55_RS10945;Name=puuE;gbkey=Gene;gene=puuE;gene_biotype=protein_coding;locus_tag=PHA55_RS10945;old_locus_tag=PHA55_10940
NZ_CP116044.1	Protein Homology	CDS	2254252	2255517	.	+	0	ID=cds-WP_032197096.1;Parent=gene-PHA55_RS10945;Dbxref=Genbank:WP_032197096.1;Name=WP_032197096.1;Ontology_term=GO:0009448,GO:0003867;gbkey=CDS;gene=puuE;go_function=4-aminobutyrate transaminase activity|0003867||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415818.1;locus_tag=PHA55_RS10945;product=4-aminobutyrate transaminase;protein_id=WP_032197096.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2255637	2256614	.	-	.	ID=gene-PHA55_RS10950;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=PHA55_RS10950;old_locus_tag=PHA55_10945
NZ_CP116044.1	Protein Homology	CDS	2255637	2256614	.	-	0	ID=cds-WP_000852835.1;Parent=gene-PHA55_RS10950;Dbxref=Genbank:WP_000852835.1;Name=WP_000852835.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309907.2;locus_tag=PHA55_RS10950;product=phage shock protein operon transcriptional activator;protein_id=WP_000852835.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2256781	2257449	.	+	.	ID=gene-PHA55_RS10955;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=PHA55_RS10955;old_locus_tag=PHA55_10950
NZ_CP116044.1	Protein Homology	CDS	2256781	2257449	.	+	0	ID=cds-WP_000511025.1;Parent=gene-PHA55_RS10955;Dbxref=Genbank:WP_000511025.1;Name=WP_000511025.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309908.1;locus_tag=PHA55_RS10955;product=phage shock protein PspA;protein_id=WP_000511025.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2257503	2257727	.	+	.	ID=gene-PHA55_RS10960;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=PHA55_RS10960;old_locus_tag=PHA55_10955
NZ_CP116044.1	Protein Homology	CDS	2257503	2257727	.	+	0	ID=cds-WP_001274963.1;Parent=gene-PHA55_RS10960;Dbxref=Genbank:WP_001274963.1;Name=WP_001274963.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309909.1;locus_tag=PHA55_RS10960;product=envelope stress response membrane protein PspB;protein_id=WP_001274963.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2257727	2258086	.	+	.	ID=gene-PHA55_RS10965;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=PHA55_RS10965;old_locus_tag=PHA55_10960
NZ_CP116044.1	Protein Homology	CDS	2257727	2258086	.	+	0	ID=cds-WP_032197097.1;Parent=gene-PHA55_RS10965;Dbxref=Genbank:WP_032197097.1;Name=WP_032197097.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309910.1;locus_tag=PHA55_RS10965;product=envelope stress response membrane protein PspC;protein_id=WP_032197097.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2258095	2258316	.	+	.	ID=gene-PHA55_RS10970;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=PHA55_RS10970;old_locus_tag=PHA55_10965
NZ_CP116044.1	Protein Homology	CDS	2258095	2258316	.	+	0	ID=cds-WP_001295585.1;Parent=gene-PHA55_RS10970;Dbxref=Genbank:WP_001295585.1;Name=WP_001295585.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309911.1;locus_tag=PHA55_RS10970;product=phage shock protein PspD;protein_id=WP_001295585.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2258391	2258705	.	+	.	ID=gene-PHA55_RS10975;Name=pspE;gbkey=Gene;gene=pspE;gene_biotype=protein_coding;locus_tag=PHA55_RS10975;old_locus_tag=PHA55_10970
NZ_CP116044.1	Protein Homology	CDS	2258391	2258705	.	+	0	ID=cds-WP_000473114.1;Parent=gene-PHA55_RS10975;Dbxref=Genbank:WP_000473114.1;Name=WP_000473114.1;gbkey=CDS;gene=pspE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000473110.1;locus_tag=PHA55_RS10975;product=thiosulfate sulfurtransferase PspE;protein_id=WP_000473114.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2258916	2260595	.	+	.	ID=gene-PHA55_RS10980;Name=ycjM;gbkey=Gene;gene=ycjM;gene_biotype=protein_coding;locus_tag=PHA55_RS10980;old_locus_tag=PHA55_10975
NZ_CP116044.1	Protein Homology	CDS	2258916	2260595	.	+	0	ID=cds-WP_032197098.1;Parent=gene-PHA55_RS10980;Dbxref=Genbank:WP_032197098.1;Name=WP_032197098.1;gbkey=CDS;gene=ycjM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415825.4;locus_tag=PHA55_RS10980;product=glucosylglycerate phosphorylase;protein_id=WP_032197098.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2260609	2261901	.	+	.	ID=gene-PHA55_RS10985;Name=ycjN;gbkey=Gene;gene=ycjN;gene_biotype=protein_coding;locus_tag=PHA55_RS10985;old_locus_tag=PHA55_10980
NZ_CP116044.1	Protein Homology	CDS	2260609	2261901	.	+	0	ID=cds-WP_000597458.1;Parent=gene-PHA55_RS10985;Dbxref=Genbank:WP_000597458.1;Name=WP_000597458.1;gbkey=CDS;gene=ycjN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415826.1;locus_tag=PHA55_RS10985;product=ABC transporter substrate-binding protein;protein_id=WP_000597458.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2261922	2262803	.	+	.	ID=gene-PHA55_RS10990;Name=ycjO;gbkey=Gene;gene=ycjO;gene_biotype=protein_coding;locus_tag=PHA55_RS10990;old_locus_tag=PHA55_10985
NZ_CP116044.1	Protein Homology	CDS	2261922	2262803	.	+	0	ID=cds-WP_001080781.1;Parent=gene-PHA55_RS10990;Dbxref=Genbank:WP_001080781.1;Name=WP_001080781.1;gbkey=CDS;gene=ycjO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415827.1;locus_tag=PHA55_RS10990;product=sugar ABC transporter permease;protein_id=WP_001080781.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2262790	2263632	.	+	.	ID=gene-PHA55_RS10995;Name=ycjP;gbkey=Gene;gene=ycjP;gene_biotype=protein_coding;locus_tag=PHA55_RS10995;old_locus_tag=PHA55_10990
NZ_CP116044.1	Protein Homology	CDS	2262790	2263632	.	+	0	ID=cds-WP_000224659.1;Parent=gene-PHA55_RS10995;Dbxref=Genbank:WP_000224659.1;Name=WP_000224659.1;gbkey=CDS;gene=ycjP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415828.1;locus_tag=PHA55_RS10995;product=carbohydrate ABC transporter permease;protein_id=WP_000224659.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2263663	2264715	.	+	.	ID=gene-PHA55_RS11000;Name=ycjQ;gbkey=Gene;gene=ycjQ;gene_biotype=protein_coding;locus_tag=PHA55_RS11000;old_locus_tag=PHA55_10995
NZ_CP116044.1	Protein Homology	CDS	2263663	2264715	.	+	0	ID=cds-WP_000737339.1;Parent=gene-PHA55_RS11000;Dbxref=Genbank:WP_000737339.1;Name=WP_000737339.1;gbkey=CDS;gene=ycjQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415829.1;locus_tag=PHA55_RS11000;product=zinc-binding alcohol dehydrogenase;protein_id=WP_000737339.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2264733	2265521	.	+	.	ID=gene-PHA55_RS11005;Name=ycjR;gbkey=Gene;gene=ycjR;gene_biotype=protein_coding;locus_tag=PHA55_RS11005;old_locus_tag=PHA55_11000
NZ_CP116044.1	Protein Homology	CDS	2264733	2265521	.	+	0	ID=cds-WP_000690238.1;Parent=gene-PHA55_RS11005;Dbxref=Genbank:WP_000690238.1;Name=WP_000690238.1;gbkey=CDS;gene=ycjR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415830.2;locus_tag=PHA55_RS11005;product=sugar phosphate isomerase/epimerase;protein_id=WP_000690238.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2265531	2266586	.	+	.	ID=gene-PHA55_RS11010;Name=ycjS;gbkey=Gene;gene=ycjS;gene_biotype=protein_coding;locus_tag=PHA55_RS11010;old_locus_tag=PHA55_11005
NZ_CP116044.1	Protein Homology	CDS	2265531	2266586	.	+	0	ID=cds-WP_001299974.1;Parent=gene-PHA55_RS11010;Dbxref=Genbank:WP_001299974.1;Name=WP_001299974.1;gbkey=CDS;gene=ycjS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415831.1;locus_tag=PHA55_RS11010;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_001299974.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	2266583	2268851	.	+	.	ID=gene-PHA55_RS11015;Name=ycjT;gbkey=Gene;gene=ycjT;gene_biotype=pseudogene;locus_tag=PHA55_RS11015;old_locus_tag=PHA55_11010;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	2266583	2268851	.	+	0	ID=cds-PHA55_RS11015;Parent=gene-PHA55_RS11015;Note=frameshifted;gbkey=CDS;gene=ycjT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309922.1;locus_tag=PHA55_RS11015;product=kojibiose phosphorylase;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	2268848	2269507	.	+	.	ID=gene-PHA55_RS11020;Name=pgmB;gbkey=Gene;gene=pgmB;gene_biotype=protein_coding;locus_tag=PHA55_RS11020;old_locus_tag=PHA55_11015
NZ_CP116044.1	Protein Homology	CDS	2268848	2269507	.	+	0	ID=cds-WP_000775799.1;Parent=gene-PHA55_RS11020;Dbxref=Genbank:WP_000775799.1;Name=WP_000775799.1;Ontology_term=GO:0046352,GO:0008801;gbkey=CDS;gene=pgmB;go_function=beta-phosphoglucomutase activity|0008801||IEA;go_process=disaccharide catabolic process|0046352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415833.1;locus_tag=PHA55_RS11020;product=beta-phosphoglucomutase;protein_id=WP_000775799.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2269521	2270603	.	+	.	ID=gene-PHA55_RS11025;Name=PHA55_RS11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11025;old_locus_tag=PHA55_11020
NZ_CP116044.1	Protein Homology	CDS	2269521	2270603	.	+	0	ID=cds-WP_000057978.1;Parent=gene-PHA55_RS11025;Dbxref=Genbank:WP_000057978.1;Name=WP_000057978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309924.1;locus_tag=PHA55_RS11025;product=ABC transporter ATP-binding protein;protein_id=WP_000057978.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2270648	2271553	.	+	.	ID=gene-PHA55_RS11030;Name=ompG;gbkey=Gene;gene=ompG;gene_biotype=protein_coding;locus_tag=PHA55_RS11030;old_locus_tag=PHA55_11025
NZ_CP116044.1	Protein Homology	CDS	2270648	2271553	.	+	0	ID=cds-WP_000735236.1;Parent=gene-PHA55_RS11030;Dbxref=Genbank:WP_000735236.1;Name=WP_000735236.1;gbkey=CDS;gene=ompG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415835.1;locus_tag=PHA55_RS11030;product=monomeric porin OmpG;protein_id=WP_000735236.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2271664	2272662	.	-	.	ID=gene-PHA55_RS11035;Name=ycjW;gbkey=Gene;gene=ycjW;gene_biotype=protein_coding;locus_tag=PHA55_RS11035;old_locus_tag=PHA55_11030
NZ_CP116044.1	Protein Homology	CDS	2271664	2272662	.	-	0	ID=cds-WP_000075377.1;Parent=gene-PHA55_RS11035;Dbxref=Genbank:WP_000075377.1;Name=WP_000075377.1;gbkey=CDS;gene=ycjW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415836.1;locus_tag=PHA55_RS11035;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000075377.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2272817	2274214	.	+	.	ID=gene-PHA55_RS11040;Name=ycjX;gbkey=Gene;gene=ycjX;gene_biotype=protein_coding;locus_tag=PHA55_RS11040;old_locus_tag=PHA55_11035
NZ_CP116044.1	Protein Homology	CDS	2272817	2274214	.	+	0	ID=cds-WP_000825784.1;Parent=gene-PHA55_RS11040;Dbxref=Genbank:WP_000825784.1;Name=WP_000825784.1;gbkey=CDS;gene=ycjX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=PHA55_RS11040;product=YcjX family protein;protein_id=WP_000825784.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2274211	2275272	.	+	.	ID=gene-PHA55_RS11045;Name=ycjF;gbkey=Gene;gene=ycjF;gene_biotype=protein_coding;locus_tag=PHA55_RS11045;old_locus_tag=PHA55_11040
NZ_CP116044.1	Protein Homology	CDS	2274211	2275272	.	+	0	ID=cds-WP_000138717.1;Parent=gene-PHA55_RS11045;Dbxref=Genbank:WP_000138717.1;Name=WP_000138717.1;gbkey=CDS;gene=ycjF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415838.1;locus_tag=PHA55_RS11045;product=YcjF family protein;protein_id=WP_000138717.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2275420	2276961	.	+	.	ID=gene-PHA55_RS11050;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=PHA55_RS11050;old_locus_tag=PHA55_11045
NZ_CP116044.1	Protein Homology	CDS	2275420	2276961	.	+	0	ID=cds-WP_001300658.1;Parent=gene-PHA55_RS11050;Dbxref=Genbank:WP_001300658.1;Name=WP_001300658.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415839.1;locus_tag=PHA55_RS11050;product=transcriptional regulator TyrR;protein_id=WP_001300658.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2277005	2277511	.	-	.	ID=gene-PHA55_RS11055;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=PHA55_RS11055;old_locus_tag=PHA55_11050
NZ_CP116044.1	Protein Homology	CDS	2277005	2277511	.	-	0	ID=cds-WP_000084387.1;Parent=gene-PHA55_RS11055;Dbxref=Genbank:WP_000084387.1;Name=WP_000084387.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309930.1;locus_tag=PHA55_RS11055;product=thiol peroxidase;protein_id=WP_000084387.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2277630	2278595	.	+	.	ID=gene-PHA55_RS11060;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=protein_coding;locus_tag=PHA55_RS11060;old_locus_tag=PHA55_11055
NZ_CP116044.1	Protein Homology	CDS	2277630	2278595	.	+	0	ID=cds-WP_271287550.1;Parent=gene-PHA55_RS11060;Dbxref=Genbank:WP_271287550.1;Name=WP_271287550.1;Ontology_term=GO:0009063,GO:0016855;gbkey=CDS;gene=ycjG;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707230.2;locus_tag=PHA55_RS11060;product=L-Ala-D/L-Glu epimerase;protein_id=WP_271287550.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2278570	2279298	.	-	.	ID=gene-PHA55_RS11065;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=PHA55_RS11065;old_locus_tag=PHA55_11060
NZ_CP116044.1	Protein Homology	CDS	2278570	2279298	.	-	0	ID=cds-WP_001307161.1;Parent=gene-PHA55_RS11065;Dbxref=Genbank:WP_001307161.1;Name=WP_001307161.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415842.2;locus_tag=PHA55_RS11065;product=murein tripeptide amidase MpaA;protein_id=WP_001307161.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2279589	2280227	.	-	.	ID=gene-PHA55_RS11070;Name=PHA55_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11070;old_locus_tag=PHA55_11065
NZ_CP116044.1	Protein Homology	CDS	2279589	2280227	.	-	0	ID=cds-WP_000800177.1;Parent=gene-PHA55_RS11070;Dbxref=Genbank:WP_000800177.1;Name=WP_000800177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707232.2;locus_tag=PHA55_RS11070;product=SDR family oxidoreductase;protein_id=WP_000800177.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2280245	2281177	.	-	.	ID=gene-PHA55_RS11075;Name=PHA55_RS11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11075;old_locus_tag=PHA55_11070
NZ_CP116044.1	Protein Homology	CDS	2280245	2281177	.	-	0	ID=cds-WP_000680607.1;Parent=gene-PHA55_RS11075;Dbxref=Genbank:WP_000680607.1;Name=WP_000680607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000680621.1;locus_tag=PHA55_RS11075;product=alpha/beta hydrolase;protein_id=WP_000680607.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2281177	2282097	.	-	.	ID=gene-PHA55_RS11080;Name=PHA55_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11080;old_locus_tag=PHA55_11075
NZ_CP116044.1	Protein Homology	CDS	2281177	2282097	.	-	0	ID=cds-WP_001345592.1;Parent=gene-PHA55_RS11080;Dbxref=Genbank:WP_001345592.1;Name=WP_001345592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415843.2;locus_tag=PHA55_RS11080;product=alpha/beta hydrolase;protein_id=WP_001345592.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2282235	2283134	.	+	.	ID=gene-PHA55_RS11085;Name=pgrR;gbkey=Gene;gene=pgrR;gene_biotype=protein_coding;locus_tag=PHA55_RS11085;old_locus_tag=PHA55_11080
NZ_CP116044.1	Protein Homology	CDS	2282235	2283134	.	+	0	ID=cds-WP_000817693.1;Parent=gene-PHA55_RS11085;Dbxref=Genbank:WP_000817693.1;Name=WP_000817693.1;gbkey=CDS;gene=pgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309937.1;locus_tag=PHA55_RS11085;product=DNA-binding transcriptional regulator PgrR;protein_id=WP_000817693.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2283471	2285084	.	+	.	ID=gene-PHA55_RS11090;Name=mppA;gbkey=Gene;gene=mppA;gene_biotype=protein_coding;locus_tag=PHA55_RS11090;old_locus_tag=PHA55_11085
NZ_CP116044.1	Protein Homology	CDS	2283471	2285084	.	+	0	ID=cds-WP_000683008.1;Parent=gene-PHA55_RS11090;Dbxref=Genbank:WP_000683008.1;Name=WP_000683008.1;gbkey=CDS;gene=mppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415845.2;locus_tag=PHA55_RS11090;product=murein tripeptide ABC transporter substrate-binding protein MppA;protein_id=WP_000683008.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2285135	2286166	.	-	.	ID=gene-PHA55_RS11095;Name=ynaI;gbkey=Gene;gene=ynaI;gene_biotype=protein_coding;locus_tag=PHA55_RS11095;old_locus_tag=PHA55_11090
NZ_CP116044.1	Protein Homology	CDS	2285135	2286166	.	-	0	ID=cds-WP_000559900.1;Parent=gene-PHA55_RS11095;Dbxref=Genbank:WP_000559900.1;Name=WP_000559900.1;gbkey=CDS;gene=ynaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309939.1;locus_tag=PHA55_RS11095;product=low conductance mechanosensitive channel YnaI;protein_id=WP_000559900.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2286410	2286667	.	+	.	ID=gene-PHA55_RS11100;Name=ynaJ;gbkey=Gene;gene=ynaJ;gene_biotype=protein_coding;locus_tag=PHA55_RS11100;old_locus_tag=PHA55_11095
NZ_CP116044.1	Protein Homology	CDS	2286410	2286667	.	+	0	ID=cds-WP_000605090.1;Parent=gene-PHA55_RS11100;Dbxref=Genbank:WP_000605090.1;Name=WP_000605090.1;gbkey=CDS;gene=ynaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309940.1;locus_tag=PHA55_RS11100;product=DUF2534 family protein;protein_id=WP_000605090.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2286717	2287667	.	-	.	ID=gene-PHA55_RS11105;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=PHA55_RS11105;old_locus_tag=PHA55_11100
NZ_CP116044.1	Protein Homology	CDS	2286717	2287667	.	-	0	ID=cds-WP_001262123.1;Parent=gene-PHA55_RS11105;Dbxref=Genbank:WP_001262123.1;Name=WP_001262123.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309941.1;locus_tag=PHA55_RS11105;product=universal stress protein UspE;protein_id=WP_001262123.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2287819	2288571	.	-	.	ID=gene-PHA55_RS11110;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=PHA55_RS11110;old_locus_tag=PHA55_11105
NZ_CP116044.1	Protein Homology	CDS	2287819	2288571	.	-	0	ID=cds-WP_000611911.1;Parent=gene-PHA55_RS11110;Dbxref=Genbank:WP_000611911.1;Name=WP_000611911.1;gbkey=CDS;gene=fnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=PHA55_RS11110;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_000611911.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2288766	2289281	.	-	.	ID=gene-PHA55_RS11115;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=PHA55_RS11115;old_locus_tag=PHA55_11110
NZ_CP116044.1	Protein Homology	CDS	2288766	2289281	.	-	0	ID=cds-WP_000945013.1;Parent=gene-PHA55_RS11115;Dbxref=Genbank:WP_000945013.1;Name=WP_000945013.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;gene=ogt;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415851.1;locus_tag=PHA55_RS11115;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_000945013.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2289292	2290818	.	-	.	ID=gene-PHA55_RS11120;Name=abgT;gbkey=Gene;gene=abgT;gene_biotype=protein_coding;locus_tag=PHA55_RS11120;old_locus_tag=PHA55_11115
NZ_CP116044.1	Protein Homology	CDS	2289292	2290818	.	-	0	ID=cds-WP_000062979.1;Parent=gene-PHA55_RS11120;Dbxref=Genbank:WP_000062979.1;Name=WP_000062979.1;gbkey=CDS;gene=abgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415852.2;locus_tag=PHA55_RS11120;product=p-aminobenzoyl-glutamate transporter;protein_id=WP_000062979.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2290855	2292300	.	-	.	ID=gene-PHA55_RS11125;Name=abgB;gbkey=Gene;gene=abgB;gene_biotype=protein_coding;locus_tag=PHA55_RS11125;old_locus_tag=PHA55_11120
NZ_CP116044.1	Protein Homology	CDS	2290855	2292300	.	-	0	ID=cds-WP_001156477.1;Parent=gene-PHA55_RS11125;Dbxref=Genbank:WP_001156477.1;Name=WP_001156477.1;gbkey=CDS;gene=abgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415853.1;locus_tag=PHA55_RS11125;product=p-aminobenzoyl-glutamate hydrolase subunit AbgB;protein_id=WP_001156477.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2292300	2293610	.	-	.	ID=gene-PHA55_RS11130;Name=abgA;gbkey=Gene;gene=abgA;gene_biotype=protein_coding;locus_tag=PHA55_RS11130;old_locus_tag=PHA55_11125
NZ_CP116044.1	Protein Homology	CDS	2292300	2293610	.	-	0	ID=cds-WP_000444949.1;Parent=gene-PHA55_RS11130;Dbxref=Genbank:WP_000444949.1;Name=WP_000444949.1;gbkey=CDS;gene=abgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415854.4;locus_tag=PHA55_RS11130;product=p-aminobenzoyl-glutamate hydrolase subunit AbgA;protein_id=WP_000444949.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2293786	2294694	.	+	.	ID=gene-PHA55_RS11135;Name=abgR;gbkey=Gene;gene=abgR;gene_biotype=protein_coding;locus_tag=PHA55_RS11135;old_locus_tag=PHA55_11130
NZ_CP116044.1	Protein Homology	CDS	2293786	2294694	.	+	0	ID=cds-WP_000885467.1;Parent=gene-PHA55_RS11135;Dbxref=Genbank:WP_000885467.1;Name=WP_000885467.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=abgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309950.1;locus_tag=PHA55_RS11135;product=LysR family transcriptional regulator;protein_id=WP_000885467.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2295024	2295587	.	+	.	ID=gene-PHA55_RS11140;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=PHA55_RS11140;old_locus_tag=PHA55_11135
NZ_CP116044.1	Protein Homology	CDS	2295024	2295587	.	+	0	ID=cds-WP_001046821.1;Parent=gene-PHA55_RS11140;Dbxref=Genbank:WP_001046821.1;Name=WP_001046821.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309951.1;locus_tag=PHA55_RS11140;product=DNA endonuclease SmrA;protein_id=WP_001046821.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2295608	2296840	.	-	.	ID=gene-PHA55_RS11145;Name=dgcM;gbkey=Gene;gene=dgcM;gene_biotype=protein_coding;locus_tag=PHA55_RS11145;old_locus_tag=PHA55_11140
NZ_CP116044.1	Protein Homology	CDS	2295608	2296840	.	-	0	ID=cds-WP_000628065.1;Parent=gene-PHA55_RS11145;Dbxref=Genbank:WP_000628065.1;Name=WP_000628065.1;gbkey=CDS;gene=dgcM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309952.2;locus_tag=PHA55_RS11145;product=diguanylate cyclase DgcM;protein_id=WP_000628065.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2297034	2297081	.	+	.	ID=gene-PHA55_RS11150;Name=ydaN;gbkey=Gene;gene=ydaN;gene_biotype=protein_coding;locus_tag=PHA55_RS11150;old_locus_tag=PHA55_11145
NZ_CP116044.1	Protein Homology	CDS	2297034	2297081	.	+	0	ID=cds-WP_211180494.1;Parent=gene-PHA55_RS11150;Dbxref=Genbank:WP_211180494.1;Name=WP_211180494.1;gbkey=CDS;gene=ydaN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051183.1;locus_tag=PHA55_RS11150;product=protein YnaN;protein_id=WP_211180494.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2297095	2298078	.	+	.	ID=gene-PHA55_RS11155;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=PHA55_RS11155;old_locus_tag=PHA55_11150
NZ_CP116044.1	Protein Homology	CDS	2297095	2298078	.	+	0	ID=cds-WP_000387388.1;Parent=gene-PHA55_RS11155;Dbxref=Genbank:WP_000387388.1;Name=WP_000387388.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309953.1;locus_tag=PHA55_RS11155;product=zinc transporter ZntB;protein_id=WP_000387388.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2298353	2298526	.	+	.	ID=gene-PHA55_RS11160;Name=ynaL;gbkey=Gene;gene=ynaL;gene_biotype=protein_coding;locus_tag=PHA55_RS11160;old_locus_tag=PHA55_11155
NZ_CP116044.1	Protein Homology	CDS	2298353	2298526	.	+	0	ID=cds-WP_001296046.1;Parent=gene-PHA55_RS11160;Dbxref=Genbank:WP_001296046.1;Name=WP_001296046.1;gbkey=CDS;gene=ynaL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518775.1;locus_tag=PHA55_RS11160;product=protein YnaL;protein_id=WP_001296046.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2298556	2299929	.	+	.	ID=gene-PHA55_RS11165;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=PHA55_RS11165;old_locus_tag=PHA55_11160
NZ_CP116044.1	Protein Homology	CDS	2298556	2299929	.	+	0	ID=cds-WP_000123720.1;Parent=gene-PHA55_RS11165;Dbxref=Genbank:WP_000123720.1;Name=WP_000123720.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309954.1;locus_tag=PHA55_RS11165;product=ATP-dependent RNA helicase DbpA;protein_id=WP_000123720.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2300058	2300993	.	-	.	ID=gene-PHA55_RS11170;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=PHA55_RS11170;old_locus_tag=PHA55_11165
NZ_CP116044.1	Protein Homology	CDS	2300058	2300993	.	-	0	ID=cds-WP_001585625.1;Parent=gene-PHA55_RS11170;Dbxref=Genbank:WP_001585625.1;Name=WP_001585625.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309955.1;locus_tag=PHA55_RS11170;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_001585625.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2301045	2302280	.	-	.	ID=gene-PHA55_RS11175;Name=intR;gbkey=Gene;gene=intR;gene_biotype=protein_coding;locus_tag=PHA55_RS11175;old_locus_tag=PHA55_11170
NZ_CP116044.1	Protein Homology	CDS	2301045	2302280	.	-	0	ID=cds-WP_072017917.1;Parent=gene-PHA55_RS11175;Dbxref=Genbank:WP_072017917.1;Name=WP_072017917.1;gbkey=CDS;gene=intR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309956.1;locus_tag=PHA55_RS11175;product=site-specific integrase;protein_id=WP_072017917.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2302282	2302497	.	-	.	ID=gene-PHA55_RS11180;Name=xisR;gbkey=Gene;gene=xisR;gene_biotype=protein_coding;locus_tag=PHA55_RS11180;old_locus_tag=PHA55_11175
NZ_CP116044.1	Protein Homology	CDS	2302282	2302497	.	-	0	ID=cds-WP_000079604.1;Parent=gene-PHA55_RS11180;Dbxref=Genbank:WP_000079604.1;Name=WP_000079604.1;gbkey=CDS;gene=xisR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309957.2;locus_tag=PHA55_RS11180;product=excisionase XisR;protein_id=WP_000079604.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2302597	2302785	.	-	.	ID=gene-PHA55_RS11185;Name=PHA55_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11185;old_locus_tag=PHA55_11180
NZ_CP116044.1	Protein Homology	CDS	2302597	2302785	.	-	0	ID=cds-WP_001383994.1;Parent=gene-PHA55_RS11185;Dbxref=Genbank:WP_001383994.1;Name=WP_001383994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309958.1;locus_tag=PHA55_RS11185;product=DUF1187 family protein;protein_id=WP_001383994.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2302778	2302972	.	-	.	ID=gene-PHA55_RS11190;Name=ralR;gbkey=Gene;gene=ralR;gene_biotype=protein_coding;locus_tag=PHA55_RS11190;old_locus_tag=PHA55_11185
NZ_CP116044.1	Protein Homology	CDS	2302778	2302972	.	-	0	ID=cds-WP_021500490.1;Parent=gene-PHA55_RS11190;Dbxref=Genbank:WP_021500490.1;Name=WP_021500490.1;gbkey=CDS;gene=ralR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415864.1;locus_tag=PHA55_RS11190;product=type I toxin-antitoxin system endodeoxyribonuclease toxin RalR;protein_id=WP_021500490.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2303036	2304124	.	-	.	ID=gene-PHA55_RS11195;Name=PHA55_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11195;old_locus_tag=PHA55_11190
NZ_CP116044.1	Protein Homology	CDS	2303036	2304124	.	-	0	ID=cds-WP_021529594.1;Parent=gene-PHA55_RS11195;Dbxref=Genbank:WP_021529594.1;Name=WP_021529594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001700820.1;locus_tag=PHA55_RS11195;product=recombinase RecT;protein_id=WP_021529594.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2304139	2307285	.	-	.	ID=gene-PHA55_RS11200;Name=recE;gbkey=Gene;gene=recE;gene_biotype=protein_coding;locus_tag=PHA55_RS11200;old_locus_tag=PHA55_11195
NZ_CP116044.1	Protein Homology	CDS	2304139	2307285	.	-	0	ID=cds-WP_161622427.1;Parent=gene-PHA55_RS11200;Dbxref=Genbank:WP_161622427.1;Name=WP_161622427.1;Ontology_term=GO:0090305,GO:0051908;gbkey=CDS;gene=recE;go_function=double-stranded DNA 5'-3' exodeoxyribonuclease activity|0051908||IEA;go_process=nucleic acid phosphodiester bond hydrolysis|0090305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001692680.1;locus_tag=PHA55_RS11200;product=exodeoxyribonuclease VIII;protein_id=WP_161622427.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2307387	2307662	.	-	.	ID=gene-PHA55_RS11205;Name=PHA55_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11205;old_locus_tag=PHA55_11200
NZ_CP116044.1	Protein Homology	CDS	2307387	2307662	.	-	0	ID=cds-WP_000632298.1;Parent=gene-PHA55_RS11205;Dbxref=Genbank:WP_000632298.1;Name=WP_000632298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415867.1;locus_tag=PHA55_RS11205;product=hypothetical protein;protein_id=WP_000632298.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2307737	2307907	.	-	.	ID=gene-PHA55_RS11210;Name=PHA55_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11210;old_locus_tag=PHA55_11205
NZ_CP116044.1	Protein Homology	CDS	2307737	2307907	.	-	0	ID=cds-WP_087907244.1;Parent=gene-PHA55_RS11210;Dbxref=Genbank:WP_087907244.1;Name=WP_087907244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519829.1;locus_tag=PHA55_RS11210;product=YdaE family protein;protein_id=WP_087907244.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2307907	2308128	.	-	.	ID=gene-PHA55_RS11215;Name=kilR;gbkey=Gene;gene=kilR;gene_biotype=protein_coding;locus_tag=PHA55_RS11215;old_locus_tag=PHA55_11210
NZ_CP116044.1	Protein Homology	CDS	2307907	2308128	.	-	0	ID=cds-WP_000560220.1;Parent=gene-PHA55_RS11215;Dbxref=Genbank:WP_000560220.1;Name=WP_000560220.1;gbkey=CDS;gene=kilR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309963.2;locus_tag=PHA55_RS11215;product=killing protein KilR;protein_id=WP_000560220.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2308526	2308759	.	+	.	ID=gene-PHA55_RS11220;Name=PHA55_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11220;old_locus_tag=PHA55_11215
NZ_CP116044.1	Protein Homology	CDS	2308526	2308759	.	+	0	ID=cds-WP_032221031.1;Parent=gene-PHA55_RS11220;Dbxref=Genbank:WP_032221031.1;Name=WP_032221031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774818.1;locus_tag=PHA55_RS11220;product=hypothetical protein;protein_id=WP_032221031.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2308721	2309026	.	-	.	ID=gene-PHA55_RS11225;Name=PHA55_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11225;old_locus_tag=PHA55_11220
NZ_CP116044.1	Protein Homology	CDS	2308721	2309026	.	-	0	ID=cds-WP_063102142.1;Parent=gene-PHA55_RS11225;Dbxref=Genbank:WP_063102142.1;Name=WP_063102142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000144717.1;locus_tag=PHA55_RS11225;product=hypothetical protein;protein_id=WP_063102142.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2309277	2309738	.	-	.	ID=gene-PHA55_RS11230;Name=PHA55_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11230;old_locus_tag=PHA55_11225
NZ_CP116044.1	Protein Homology	CDS	2309277	2309738	.	-	0	ID=cds-WP_062873818.1;Parent=gene-PHA55_RS11230;Dbxref=Genbank:WP_062873818.1;Name=WP_062873818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000753627.1;locus_tag=PHA55_RS11230;product=helix-turn-helix domain-containing protein;protein_id=WP_062873818.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2309845	2310093	.	+	.	ID=gene-PHA55_RS11235;Name=PHA55_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11235;old_locus_tag=PHA55_11230
NZ_CP116044.1	Protein Homology	CDS	2309845	2310093	.	+	0	ID=cds-WP_063102143.1;Parent=gene-PHA55_RS11235;Dbxref=Genbank:WP_063102143.1;Name=WP_063102143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001053425.1;locus_tag=PHA55_RS11235;product=YdaS family helix-turn-helix protein;protein_id=WP_063102143.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2310104	2310526	.	+	.	ID=gene-PHA55_RS11240;Name=ydaT;gbkey=Gene;gene=ydaT;gene_biotype=protein_coding;locus_tag=PHA55_RS11240;old_locus_tag=PHA55_11235
NZ_CP116044.1	Protein Homology	CDS	2310104	2310526	.	+	0	ID=cds-WP_062873816.1;Parent=gene-PHA55_RS11240;Dbxref=Genbank:WP_062873816.1;Name=WP_062873816.1;gbkey=CDS;gene=ydaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415876.1;locus_tag=PHA55_RS11240;product=toxin YdaT family protein;protein_id=WP_062873816.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2310590	2311609	.	+	.	ID=gene-PHA55_RS11245;Name=PHA55_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11245;old_locus_tag=PHA55_11240
NZ_CP116044.1	Protein Homology	CDS	2310590	2311609	.	+	0	ID=cds-WP_062873850.1;Parent=gene-PHA55_RS11245;Dbxref=Genbank:WP_062873850.1;Name=WP_062873850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729531.1;locus_tag=PHA55_RS11245;product=DUF1376 domain-containing protein;protein_id=WP_062873850.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2311602	2312063	.	+	.	ID=gene-PHA55_RS11250;Name=PHA55_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11250;old_locus_tag=PHA55_11245
NZ_CP116044.1	Protein Homology	CDS	2311602	2312063	.	+	0	ID=cds-WP_235387320.1;Parent=gene-PHA55_RS11250;Dbxref=Genbank:WP_235387320.1;Name=WP_235387320.1;Ontology_term=GO:0006270;gbkey=CDS;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310232.2;locus_tag=PHA55_RS11250;product=replication protein P;protein_id=WP_235387320.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2312098	2312868	.	+	.	ID=gene-PHA55_RS11255;Name=PHA55_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11255;old_locus_tag=PHA55_11250
NZ_CP116044.1	Protein Homology	CDS	2312098	2312868	.	+	0	ID=cds-WP_087907239.1;Parent=gene-PHA55_RS11255;Dbxref=Genbank:WP_087907239.1;Name=WP_087907239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309102.1;locus_tag=PHA55_RS11255;product=DUF1627 domain-containing protein;protein_id=WP_087907239.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2312885	2313307	.	+	.	ID=gene-PHA55_RS11260;Name=PHA55_RS11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11260;old_locus_tag=PHA55_11255
NZ_CP116044.1	Protein Homology	CDS	2312885	2313307	.	+	0	ID=cds-WP_087907238.1;Parent=gene-PHA55_RS11260;Dbxref=Genbank:WP_087907238.1;Name=WP_087907238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309975.1;locus_tag=PHA55_RS11260;product=DUF977 family protein;protein_id=WP_087907238.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2313304	2313558	.	+	.	ID=gene-PHA55_RS11265;Name=PHA55_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11265;old_locus_tag=PHA55_11260
NZ_CP116044.1	Protein Homology	CDS	2313304	2313558	.	+	0	ID=cds-WP_033812989.1;Parent=gene-PHA55_RS11265;Dbxref=Genbank:WP_033812989.1;Name=WP_033812989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001294161.1;locus_tag=PHA55_RS11265;product=hypothetical protein;protein_id=WP_033812989.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2313551	2313862	.	+	.	ID=gene-PHA55_RS11270;Name=PHA55_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11270;old_locus_tag=PHA55_11265
NZ_CP116044.1	Protein Homology	CDS	2313551	2313862	.	+	0	ID=cds-WP_033812990.1;Parent=gene-PHA55_RS11270;Dbxref=Genbank:WP_033812990.1;Name=WP_033812990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310784.1;locus_tag=PHA55_RS11270;product=hypothetical protein;protein_id=WP_033812990.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2313991	2314173	.	+	.	ID=gene-PHA55_RS11275;Name=PHA55_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11275;old_locus_tag=PHA55_11270
NZ_CP116044.1	Protein Homology	CDS	2313991	2314173	.	+	0	ID=cds-WP_001224672.1;Parent=gene-PHA55_RS11275;Dbxref=Genbank:WP_001224672.1;Name=WP_001224672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001224679.1;locus_tag=PHA55_RS11275;product=hypothetical protein;protein_id=WP_001224672.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2314166	2314342	.	+	.	ID=gene-PHA55_RS11280;Name=PHA55_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11280;old_locus_tag=PHA55_11275
NZ_CP116044.1	Protein Homology	CDS	2314166	2314342	.	+	0	ID=cds-WP_165835424.1;Parent=gene-PHA55_RS11280;Dbxref=Genbank:WP_165835424.1;Name=WP_165835424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000753063.1;locus_tag=PHA55_RS11280;product=hypothetical protein;protein_id=WP_165835424.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	2314339	2314836	.	+	.	ID=gene-PHA55_RS11285;Name=PHA55_RS11285;end_range=2314836,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS11285;old_locus_tag=PHA55_11280;partial=true;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	2314339	2314836	.	+	0	ID=cds-PHA55_RS11285;Parent=gene-PHA55_RS11285;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2314836,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000185346.1;locus_tag=PHA55_RS11285;partial=true;product=ead/Ea22-like family protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	2315148	2315609	.	-	.	ID=gene-PHA55_RS11290;Name=PHA55_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11290;old_locus_tag=PHA55_11285
NZ_CP116044.1	GeneMarkS-2+	CDS	2315148	2315609	.	-	0	ID=cds-WP_089624648.1;Parent=gene-PHA55_RS11290;Dbxref=Genbank:WP_089624648.1;Name=WP_089624648.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA55_RS11290;product=hypothetical protein;protein_id=WP_089624648.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2315597	2316481	.	-	.	ID=gene-PHA55_RS11295;Name=PHA55_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11295;old_locus_tag=PHA55_11290
NZ_CP116044.1	Protein Homology	CDS	2315597	2316481	.	-	0	ID=cds-WP_087907236.1;Parent=gene-PHA55_RS11295;Dbxref=Genbank:WP_087907236.1;Name=WP_087907236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000273481.1;locus_tag=PHA55_RS11295;product=hypothetical protein;protein_id=WP_087907236.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2316623	2316796	.	+	.	ID=gene-PHA55_RS11300;Name=PHA55_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11300;old_locus_tag=PHA55_11295
NZ_CP116044.1	Protein Homology	CDS	2316623	2316796	.	+	0	ID=cds-WP_087907235.1;Parent=gene-PHA55_RS11300;Dbxref=Genbank:WP_087907235.1;Name=WP_087907235.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416080.1;locus_tag=PHA55_RS11300;product=Hok/Gef family protein;protein_id=WP_087907235.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2317121	2317297	.	+	.	ID=gene-PHA55_RS11305;Name=PHA55_RS11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11305;old_locus_tag=PHA55_11300
NZ_CP116044.1	Protein Homology	CDS	2317121	2317297	.	+	0	ID=cds-WP_001774829.1;Parent=gene-PHA55_RS11305;Dbxref=Genbank:WP_001774829.1;Name=WP_001774829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774829.1;locus_tag=PHA55_RS11305;product=hypothetical protein;protein_id=WP_001774829.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2317357	2317956	.	+	.	ID=gene-PHA55_RS11310;Name=PHA55_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11310;old_locus_tag=PHA55_11305
NZ_CP116044.1	Protein Homology	CDS	2317357	2317956	.	+	0	ID=cds-WP_062873745.1;Parent=gene-PHA55_RS11310;Dbxref=Genbank:WP_062873745.1;Name=WP_062873745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707250.1;locus_tag=PHA55_RS11310;product=DUF1367 family protein;protein_id=WP_062873745.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2317956	2318246	.	+	.	ID=gene-PHA55_RS11315;Name=PHA55_RS11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11315;old_locus_tag=PHA55_11310
NZ_CP116044.1	Protein Homology	CDS	2317956	2318246	.	+	0	ID=cds-WP_000228027.1;Parent=gene-PHA55_RS11315;Dbxref=Genbank:WP_000228027.1;Name=WP_000228027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706790.1;locus_tag=PHA55_RS11315;product=DUF1364 domain-containing protein;protein_id=WP_000228027.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2318243	2318785	.	+	.	ID=gene-PHA55_RS11320;Name=PHA55_RS11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11320;old_locus_tag=PHA55_11315
NZ_CP116044.1	Protein Homology	CDS	2318243	2318785	.	+	0	ID=cds-WP_000640111.1;Parent=gene-PHA55_RS11320;Dbxref=Genbank:WP_000640111.1;Name=WP_000640111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001502553.1;locus_tag=PHA55_RS11320;product=DUF1133 family protein;protein_id=WP_000640111.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2319173	2319898	.	+	.	ID=gene-PHA55_RS11325;Name=PHA55_RS11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11325;old_locus_tag=PHA55_11320
NZ_CP116044.1	Protein Homology	CDS	2319173	2319898	.	+	0	ID=cds-WP_112015687.1;Parent=gene-PHA55_RS11325;Dbxref=Genbank:WP_112015687.1;Name=WP_112015687.1;Ontology_term=GO:0090729,GO:0005615;gbkey=CDS;go_component=extracellular space|0005615||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001355271.1;locus_tag=PHA55_RS11325;product=enterotoxin A family protein;protein_id=WP_112015687.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2319966	2320391	.	+	.	ID=gene-PHA55_RS11330;Name=PHA55_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11330;old_locus_tag=PHA55_11325
NZ_CP116044.1	Protein Homology	CDS	2319966	2320391	.	+	0	ID=cds-WP_096934537.1;Parent=gene-PHA55_RS11330;Dbxref=Genbank:WP_096934537.1;Name=WP_096934537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000823297.1;locus_tag=PHA55_RS11330;product=subtilase family AB5 toxin binding subunit;protein_id=WP_096934537.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2320449	2320841	.	+	.	ID=gene-PHA55_RS11335;Name=PHA55_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11335;old_locus_tag=PHA55_11330
NZ_CP116044.1	Protein Homology	CDS	2320449	2320841	.	+	0	ID=cds-WP_001294583.1;Parent=gene-PHA55_RS11335;Dbxref=Genbank:WP_001294583.1;Name=WP_001294583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001406273.1;locus_tag=PHA55_RS11335;product=putative holin;protein_id=WP_001294583.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2320831	2321106	.	+	.	ID=gene-PHA55_RS11340;Name=PHA55_RS11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11340;old_locus_tag=PHA55_11335
NZ_CP116044.1	Protein Homology	CDS	2320831	2321106	.	+	0	ID=cds-WP_096934530.1;Parent=gene-PHA55_RS11340;Dbxref=Genbank:WP_096934530.1;Name=WP_096934530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000950483.1;locus_tag=PHA55_RS11340;product=phage holin family protein;protein_id=WP_096934530.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2321109	2321486	.	+	.	ID=gene-PHA55_RS11345;Name=PHA55_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11345;old_locus_tag=PHA55_11340
NZ_CP116044.1	Protein Homology	CDS	2321109	2321486	.	+	0	ID=cds-WP_000014554.1;Parent=gene-PHA55_RS11345;Dbxref=Genbank:WP_000014554.1;Name=WP_000014554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014543.1;locus_tag=PHA55_RS11345;product=M15 family metallopeptidase;protein_id=WP_000014554.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2321810	2322022	.	-	.	ID=gene-PHA55_RS11350;Name=PHA55_RS11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11350;old_locus_tag=PHA55_11345
NZ_CP116044.1	Protein Homology	CDS	2321810	2322022	.	-	0	ID=cds-WP_071702711.1;Parent=gene-PHA55_RS11350;Dbxref=Genbank:WP_071702711.1;Name=WP_071702711.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025005.2;locus_tag=PHA55_RS11350;product=KTSC domain-containing protein;protein_id=WP_071702711.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2321998	2322177	.	+	.	ID=gene-PHA55_RS11355;Name=PHA55_RS11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11355;old_locus_tag=PHA55_11350
NZ_CP116044.1	Protein Homology	CDS	2321998	2322177	.	+	0	ID=cds-WP_001421067.1;Parent=gene-PHA55_RS11355;Dbxref=Genbank:WP_001421067.1;Name=WP_001421067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001421067.1;locus_tag=PHA55_RS11355;product=hypothetical protein;protein_id=WP_001421067.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2322296	2323087	.	+	.	ID=gene-PHA55_RS11360;Name=PHA55_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11360;old_locus_tag=PHA55_11355
NZ_CP116044.1	Protein Homology	CDS	2322296	2323087	.	+	0	ID=cds-WP_062873741.1;Parent=gene-PHA55_RS11360;Dbxref=Genbank:WP_062873741.1;Name=WP_062873741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415883.1;locus_tag=PHA55_RS11360;product=ParB/Srx family N-terminal domain-containing protein;protein_id=WP_062873741.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2323080	2324012	.	+	.	ID=gene-PHA55_RS11365;Name=PHA55_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11365;old_locus_tag=PHA55_11360
NZ_CP116044.1	Protein Homology	CDS	2323080	2324012	.	+	0	ID=cds-WP_096934529.1;Parent=gene-PHA55_RS11365;Dbxref=Genbank:WP_096934529.1;Name=WP_096934529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001204029.1;locus_tag=PHA55_RS11365;product=hypothetical protein;protein_id=WP_096934529.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2323990	2324199	.	+	.	ID=gene-PHA55_RS11370;Name=PHA55_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11370;old_locus_tag=PHA55_11365
NZ_CP116044.1	Protein Homology	CDS	2323990	2324199	.	+	0	ID=cds-WP_000126790.1;Parent=gene-PHA55_RS11370;Dbxref=Genbank:WP_000126790.1;Name=WP_000126790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000126789.1;locus_tag=PHA55_RS11370;product=hypothetical protein;protein_id=WP_000126790.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2324203	2325294	.	+	.	ID=gene-PHA55_RS11375;Name=PHA55_RS11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11375;old_locus_tag=PHA55_11370
NZ_CP116044.1	Protein Homology	CDS	2324203	2325294	.	+	0	ID=cds-WP_000089439.1;Parent=gene-PHA55_RS11375;Dbxref=Genbank:WP_000089439.1;Name=WP_000089439.1;Ontology_term=GO:0051276;gbkey=CDS;go_process=chromosome organization|0051276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089440.1;locus_tag=PHA55_RS11375;product=terminase small subunit;protein_id=WP_000089439.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2325284	2326612	.	+	.	ID=gene-PHA55_RS11380;Name=PHA55_RS11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11380;old_locus_tag=PHA55_11375
NZ_CP116044.1	Protein Homology	CDS	2325284	2326612	.	+	0	ID=cds-WP_096934528.1;Parent=gene-PHA55_RS11380;Dbxref=Genbank:WP_096934528.1;Name=WP_096934528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001471377.1;locus_tag=PHA55_RS11380;product=terminase;protein_id=WP_096934528.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2326631	2328067	.	+	.	ID=gene-PHA55_RS11385;Name=PHA55_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11385;old_locus_tag=PHA55_11380
NZ_CP116044.1	Protein Homology	CDS	2326631	2328067	.	+	0	ID=cds-WP_001774832.1;Parent=gene-PHA55_RS11385;Dbxref=Genbank:WP_001774832.1;Name=WP_001774832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000807716.1;locus_tag=PHA55_RS11385;product=DUF1073 domain-containing protein;protein_id=WP_001774832.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2328012	2328845	.	+	.	ID=gene-PHA55_RS11390;Name=PHA55_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11390;old_locus_tag=PHA55_11385
NZ_CP116044.1	Protein Homology	CDS	2328012	2328845	.	+	0	ID=cds-WP_178085951.1;Parent=gene-PHA55_RS11390;Dbxref=Genbank:WP_178085951.1;Name=WP_178085951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001018394.1;locus_tag=PHA55_RS11390;product=hypothetical protein;protein_id=WP_178085951.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2328826	2330118	.	+	.	ID=gene-PHA55_RS11395;Name=PHA55_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11395;old_locus_tag=PHA55_11390
NZ_CP116044.1	Protein Homology	CDS	2328826	2330118	.	+	0	ID=cds-WP_000059661.1;Parent=gene-PHA55_RS11395;Dbxref=Genbank:WP_000059661.1;Name=WP_000059661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000059665.1;locus_tag=PHA55_RS11395;product=DUF2213 domain-containing protein;protein_id=WP_000059661.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2330111	2330728	.	+	.	ID=gene-PHA55_RS11400;Name=PHA55_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11400;old_locus_tag=PHA55_11395
NZ_CP116044.1	Protein Homology	CDS	2330111	2330728	.	+	0	ID=cds-WP_096934527.1;Parent=gene-PHA55_RS11400;Dbxref=Genbank:WP_096934527.1;Name=WP_096934527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001383990.1;locus_tag=PHA55_RS11400;product=hypothetical protein;protein_id=WP_096934527.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2330743	2331771	.	+	.	ID=gene-PHA55_RS11405;Name=PHA55_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11405;old_locus_tag=PHA55_11400
NZ_CP116044.1	Protein Homology	CDS	2330743	2331771	.	+	0	ID=cds-WP_001272367.1;Parent=gene-PHA55_RS11405;Dbxref=Genbank:WP_001272367.1;Name=WP_001272367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774834.1;locus_tag=PHA55_RS11405;product=hypothetical protein;protein_id=WP_001272367.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2331829	2332299	.	+	.	ID=gene-PHA55_RS11410;Name=PHA55_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11410;old_locus_tag=PHA55_11405
NZ_CP116044.1	Protein Homology	CDS	2331829	2332299	.	+	0	ID=cds-WP_000780861.1;Parent=gene-PHA55_RS11410;Dbxref=Genbank:WP_000780861.1;Name=WP_000780861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001507253.1;locus_tag=PHA55_RS11410;product=hypothetical protein;protein_id=WP_000780861.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2332299	2332739	.	+	.	ID=gene-PHA55_RS11415;Name=PHA55_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11415;old_locus_tag=PHA55_11410
NZ_CP116044.1	Protein Homology	CDS	2332299	2332739	.	+	0	ID=cds-WP_000175376.1;Parent=gene-PHA55_RS11415;Dbxref=Genbank:WP_000175376.1;Name=WP_000175376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000175373.1;locus_tag=PHA55_RS11415;product=hypothetical protein;protein_id=WP_000175376.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2332736	2333176	.	+	.	ID=gene-PHA55_RS11420;Name=PHA55_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11420;old_locus_tag=PHA55_11415
NZ_CP116044.1	Protein Homology	CDS	2332736	2333176	.	+	0	ID=cds-WP_112015690.1;Parent=gene-PHA55_RS11420;Dbxref=Genbank:WP_112015690.1;Name=WP_112015690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001421076.1;locus_tag=PHA55_RS11420;product=hypothetical protein;protein_id=WP_112015690.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2333163	2334107	.	+	.	ID=gene-PHA55_RS11425;Name=PHA55_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11425;old_locus_tag=PHA55_11420
NZ_CP116044.1	Protein Homology	CDS	2333163	2334107	.	+	0	ID=cds-WP_053272721.1;Parent=gene-PHA55_RS11425;Dbxref=Genbank:WP_053272721.1;Name=WP_053272721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001139501.1;locus_tag=PHA55_RS11425;product=hypothetical protein;protein_id=WP_053272721.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2334107	2335444	.	+	.	ID=gene-PHA55_RS11430;Name=PHA55_RS11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11430;old_locus_tag=PHA55_11425
NZ_CP116044.1	Protein Homology	CDS	2334107	2335444	.	+	0	ID=cds-WP_235387318.1;Parent=gene-PHA55_RS11430;Dbxref=Genbank:WP_235387318.1;Name=WP_235387318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000506598.1;locus_tag=PHA55_RS11430;product=hypothetical protein;protein_id=WP_235387318.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2335468	2335899	.	+	.	ID=gene-PHA55_RS11435;Name=PHA55_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11435;old_locus_tag=PHA55_11430
NZ_CP116044.1	Protein Homology	CDS	2335468	2335899	.	+	0	ID=cds-WP_000613368.1;Parent=gene-PHA55_RS11435;Dbxref=Genbank:WP_000613368.1;Name=WP_000613368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000613368.1;locus_tag=PHA55_RS11435;product=hypothetical protein;protein_id=WP_000613368.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2335896	2336513	.	+	.	ID=gene-PHA55_RS11440;Name=PHA55_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11440;old_locus_tag=PHA55_11435
NZ_CP116044.1	Protein Homology	CDS	2335896	2336513	.	+	0	ID=cds-WP_063102155.1;Parent=gene-PHA55_RS11440;Dbxref=Genbank:WP_063102155.1;Name=WP_063102155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000684989.1;locus_tag=PHA55_RS11440;product=hypothetical protein;protein_id=WP_063102155.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2336577	2338556	.	+	.	ID=gene-PHA55_RS11445;Name=PHA55_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11445;old_locus_tag=PHA55_11440
NZ_CP116044.1	Protein Homology	CDS	2336577	2338556	.	+	0	ID=cds-WP_235387317.1;Parent=gene-PHA55_RS11445;Dbxref=Genbank:WP_235387317.1;Name=WP_235387317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001421080.1;locus_tag=PHA55_RS11445;product=lytic transglycosylase domain-containing protein;protein_id=WP_235387317.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2338560	2339228	.	+	.	ID=gene-PHA55_RS11450;Name=PHA55_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11450;old_locus_tag=PHA55_11445
NZ_CP116044.1	Protein Homology	CDS	2338560	2339228	.	+	0	ID=cds-WP_161620892.1;Parent=gene-PHA55_RS11450;Dbxref=Genbank:WP_161620892.1;Name=WP_161620892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001421081.1;locus_tag=PHA55_RS11450;product=hypothetical protein;protein_id=WP_161620892.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2339225	2339491	.	+	.	ID=gene-PHA55_RS11455;Name=PHA55_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11455;old_locus_tag=PHA55_11450
NZ_CP116044.1	Protein Homology	CDS	2339225	2339491	.	+	0	ID=cds-WP_271287551.1;Parent=gene-PHA55_RS11455;Dbxref=Genbank:WP_271287551.1;Name=WP_271287551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000209259.1;locus_tag=PHA55_RS11455;product=hypothetical protein;protein_id=WP_271287551.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2339491	2340498	.	+	.	ID=gene-PHA55_RS11460;Name=PHA55_RS11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11460;old_locus_tag=PHA55_11455
NZ_CP116044.1	Protein Homology	CDS	2339491	2340498	.	+	0	ID=cds-WP_096934523.1;Parent=gene-PHA55_RS11460;Dbxref=Genbank:WP_096934523.1;Name=WP_096934523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001271164.1;locus_tag=PHA55_RS11460;product=hypothetical protein;protein_id=WP_096934523.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2340498	2341211	.	+	.	ID=gene-PHA55_RS11465;Name=PHA55_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11465;old_locus_tag=PHA55_11460
NZ_CP116044.1	Protein Homology	CDS	2340498	2341211	.	+	0	ID=cds-WP_096934522.1;Parent=gene-PHA55_RS11465;Dbxref=Genbank:WP_096934522.1;Name=WP_096934522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063617.1;locus_tag=PHA55_RS11465;product=phage baseplate protein;protein_id=WP_096934522.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2342050	2342397	.	+	.	ID=gene-PHA55_RS11470;Name=PHA55_RS11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11470;old_locus_tag=PHA55_11465
NZ_CP116044.1	Protein Homology	CDS	2342050	2342397	.	+	0	ID=cds-WP_064226511.1;Parent=gene-PHA55_RS11470;Dbxref=Genbank:WP_064226511.1;Name=WP_064226511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001261328.1;locus_tag=PHA55_RS11470;product=hypothetical protein;protein_id=WP_064226511.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2342373	2342939	.	-	.	ID=gene-PHA55_RS11475;Name=PHA55_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11475;old_locus_tag=PHA55_11470
NZ_CP116044.1	Protein Homology	CDS	2342373	2342939	.	-	0	ID=cds-WP_063080810.1;Parent=gene-PHA55_RS11475;Dbxref=Genbank:WP_063080810.1;Name=WP_063080810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000203817.1;locus_tag=PHA55_RS11475;product=antA/AntB antirepressor family protein;protein_id=WP_063080810.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2343277	2343960	.	+	.	ID=gene-PHA55_RS11480;Name=PHA55_RS11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11480;old_locus_tag=PHA55_11475
NZ_CP116044.1	GeneMarkS-2+	CDS	2343277	2343960	.	+	0	ID=cds-WP_063080809.1;Parent=gene-PHA55_RS11480;Dbxref=Genbank:WP_063080809.1;Name=WP_063080809.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA55_RS11480;product=hypothetical protein;protein_id=WP_063080809.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2343996	2344487	.	-	.	ID=gene-PHA55_RS11485;Name=PHA55_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11485;old_locus_tag=PHA55_11480
NZ_CP116044.1	GeneMarkS-2+	CDS	2343996	2344487	.	-	0	ID=cds-WP_063080808.1;Parent=gene-PHA55_RS11485;Dbxref=Genbank:WP_063080808.1;Name=WP_063080808.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA55_RS11485;product=hypothetical protein;protein_id=WP_063080808.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2344502	2345728	.	+	.	ID=gene-PHA55_RS11490;Name=PHA55_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11490;old_locus_tag=PHA55_11485
NZ_CP116044.1	Protein Homology	CDS	2344502	2345728	.	+	0	ID=cds-WP_235387316.1;Parent=gene-PHA55_RS11490;Dbxref=Genbank:WP_235387316.1;Name=WP_235387316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290027.1;locus_tag=PHA55_RS11490;product=baseplate J/gp47 family protein;protein_id=WP_235387316.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2345712	2346338	.	+	.	ID=gene-PHA55_RS11495;Name=PHA55_RS11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11495;old_locus_tag=PHA55_11490
NZ_CP116044.1	Protein Homology	CDS	2345712	2346338	.	+	0	ID=cds-WP_240992352.1;Parent=gene-PHA55_RS11495;Dbxref=Genbank:WP_240992352.1;Name=WP_240992352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199728.1;locus_tag=PHA55_RS11495;product=hypothetical protein;protein_id=WP_240992352.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2346335	2347720	.	+	.	ID=gene-PHA55_RS11500;Name=PHA55_RS11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11500;old_locus_tag=PHA55_11495
NZ_CP116044.1	Protein Homology	CDS	2346335	2347720	.	+	0	ID=cds-WP_235387314.1;Parent=gene-PHA55_RS11500;Dbxref=Genbank:WP_235387314.1;Name=WP_235387314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559076.1;locus_tag=PHA55_RS11500;product=phage tail protein;protein_id=WP_235387314.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2347723	2348268	.	+	.	ID=gene-PHA55_RS11505;Name=PHA55_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11505;old_locus_tag=PHA55_11500
NZ_CP116044.1	Protein Homology	CDS	2347723	2348268	.	+	0	ID=cds-WP_235387313.1;Parent=gene-PHA55_RS11505;Dbxref=Genbank:WP_235387313.1;Name=WP_235387313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000902876.1;locus_tag=PHA55_RS11505;product=tail fiber assembly protein;protein_id=WP_235387313.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	2348292	2350067	.	+	.	ID=gene-PHA55_RS11510;Name=PHA55_RS11510;end_range=2350067,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS11510;old_locus_tag=PHA55_11505;partial=true;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	2348292	2350067	.	+	0	ID=cds-PHA55_RS11510;Parent=gene-PHA55_RS11510;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2350067,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001723347.1;locus_tag=PHA55_RS11510;partial=true;product=prophage tail fiber N-terminal domain-containing protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	2350655	2351218	.	+	.	ID=gene-PHA55_RS11515;Name=PHA55_RS11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11515;old_locus_tag=PHA55_11510
NZ_CP116044.1	Protein Homology	CDS	2350655	2351218	.	+	0	ID=cds-WP_032221042.1;Parent=gene-PHA55_RS11515;Dbxref=Genbank:WP_032221042.1;Name=WP_032221042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774846.1;locus_tag=PHA55_RS11515;product=DUF4376 domain-containing protein;protein_id=WP_032221042.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2351758	2352192	.	-	.	ID=gene-PHA55_RS11520;Name=uspF;gbkey=Gene;gene=uspF;gene_biotype=protein_coding;locus_tag=PHA55_RS11520;old_locus_tag=PHA55_11515
NZ_CP116044.1	Protein Homology	CDS	2351758	2352192	.	-	0	ID=cds-WP_001082294.1;Parent=gene-PHA55_RS11520;Dbxref=Genbank:WP_001082294.1;Name=WP_001082294.1;gbkey=CDS;gene=uspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310024.2;locus_tag=PHA55_RS11520;product=universal stress protein UspF;protein_id=WP_001082294.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2352333	2353466	.	-	.	ID=gene-PHA55_RS11525;Name=ompN;gbkey=Gene;gene=ompN;gene_biotype=protein_coding;locus_tag=PHA55_RS11525;old_locus_tag=PHA55_11520
NZ_CP116044.1	Protein Homology	CDS	2352333	2353466	.	-	0	ID=cds-WP_000837924.1;Parent=gene-PHA55_RS11525;Dbxref=Genbank:WP_000837924.1;Name=WP_000837924.1;gbkey=CDS;gene=ompN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415895.1;locus_tag=PHA55_RS11525;product=porin OmpN;protein_id=WP_000837924.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2353833	2357357	.	-	.	ID=gene-PHA55_RS11530;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=PHA55_RS11530;old_locus_tag=PHA55_11525
NZ_CP116044.1	Protein Homology	CDS	2353833	2357357	.	-	0	ID=cds-WP_000628243.1;Parent=gene-PHA55_RS11530;Dbxref=Genbank:WP_000628243.1;Name=WP_000628243.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415896.1;locus_tag=PHA55_RS11530;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=WP_000628243.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2357631	2357897	.	+	.	ID=gene-PHA55_RS11535;Name=ydbJ;gbkey=Gene;gene=ydbJ;gene_biotype=protein_coding;locus_tag=PHA55_RS11535;old_locus_tag=PHA55_11530
NZ_CP116044.1	Protein Homology	CDS	2357631	2357897	.	+	0	ID=cds-WP_001295715.1;Parent=gene-PHA55_RS11535;Dbxref=Genbank:WP_001295715.1;Name=WP_001295715.1;gbkey=CDS;gene=ydbJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588453.1;locus_tag=PHA55_RS11535;product=DUF333 domain-containing protein;protein_id=WP_001295715.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2357894	2358316	.	-	.	ID=gene-PHA55_RS11540;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=PHA55_RS11540;old_locus_tag=PHA55_11535
NZ_CP116044.1	Protein Homology	CDS	2357894	2358316	.	-	0	ID=cds-WP_001296048.1;Parent=gene-PHA55_RS11540;Dbxref=Genbank:WP_001296048.1;Name=WP_001296048.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415897.1;locus_tag=PHA55_RS11540;product=heat shock protein HslJ;protein_id=WP_001296048.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2358427	2359416	.	-	.	ID=gene-PHA55_RS11545;Name=ldhA;gbkey=Gene;gene=ldhA;gene_biotype=protein_coding;locus_tag=PHA55_RS11545;old_locus_tag=PHA55_11540
NZ_CP116044.1	Protein Homology	CDS	2358427	2359416	.	-	0	ID=cds-WP_000762229.1;Parent=gene-PHA55_RS11545;Dbxref=Genbank:WP_000762229.1;Name=WP_000762229.1;gbkey=CDS;gene=ldhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310029.1;locus_tag=PHA55_RS11545;product=D-lactate dehydrogenase;protein_id=WP_000762229.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2359624	2362263	.	+	.	ID=gene-PHA55_RS11550;Name=ydbH;gbkey=Gene;gene=ydbH;gene_biotype=protein_coding;locus_tag=PHA55_RS11550;old_locus_tag=PHA55_11545
NZ_CP116044.1	Protein Homology	CDS	2359624	2362263	.	+	0	ID=cds-WP_000900912.1;Parent=gene-PHA55_RS11550;Dbxref=Genbank:WP_000900912.1;Name=WP_000900912.1;gbkey=CDS;gene=ydbH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415899.1;locus_tag=PHA55_RS11550;product=YdbH family protein;protein_id=WP_000900912.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2362260	2362445	.	+	.	ID=gene-PHA55_RS11555;Name=ynbE;gbkey=Gene;gene=ynbE;gene_biotype=protein_coding;locus_tag=PHA55_RS11555;old_locus_tag=PHA55_11550
NZ_CP116044.1	Protein Homology	CDS	2362260	2362445	.	+	0	ID=cds-WP_000698145.1;Parent=gene-PHA55_RS11555;Dbxref=Genbank:WP_000698145.1;Name=WP_000698145.1;gbkey=CDS;gene=ynbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415900.1;locus_tag=PHA55_RS11555;product=YnbE family lipoprotein;protein_id=WP_000698145.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2362450	2362779	.	+	.	ID=gene-PHA55_RS11560;Name=ydbL;gbkey=Gene;gene=ydbL;gene_biotype=protein_coding;locus_tag=PHA55_RS11560;old_locus_tag=PHA55_11555
NZ_CP116044.1	Protein Homology	CDS	2362450	2362779	.	+	0	ID=cds-WP_001325798.1;Parent=gene-PHA55_RS11560;Dbxref=Genbank:WP_001325798.1;Name=WP_001325798.1;gbkey=CDS;gene=ydbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707676.2;locus_tag=PHA55_RS11560;product=YdbL family protein;protein_id=WP_001325798.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2362951	2363856	.	-	.	ID=gene-PHA55_RS11565;Name=feaR;gbkey=Gene;gene=feaR;gene_biotype=protein_coding;locus_tag=PHA55_RS11565;old_locus_tag=PHA55_11560
NZ_CP116044.1	Protein Homology	CDS	2362951	2363856	.	-	0	ID=cds-WP_001067523.1;Parent=gene-PHA55_RS11565;Dbxref=Genbank:WP_001067523.1;Name=WP_001067523.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=feaR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415902.1;locus_tag=PHA55_RS11565;product=transcriptional regulator FeaR;protein_id=WP_001067523.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2364092	2365591	.	+	.	ID=gene-PHA55_RS11570;Name=feaB;gbkey=Gene;gene=feaB;gene_biotype=protein_coding;gene_synonym=maoB,padA;locus_tag=PHA55_RS11570;old_locus_tag=PHA55_11565
NZ_CP116044.1	Protein Homology	CDS	2364092	2365591	.	+	0	ID=cds-WP_032197100.1;Parent=gene-PHA55_RS11570;Dbxref=Genbank:WP_032197100.1;Name=WP_032197100.1;gbkey=CDS;gene=feaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415903.4;locus_tag=PHA55_RS11570;product=phenylacetaldehyde dehydrogenase;protein_id=WP_032197100.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2365649	2367922	.	-	.	ID=gene-PHA55_RS11575;Name=tynA;gbkey=Gene;gene=tynA;gene_biotype=protein_coding;locus_tag=PHA55_RS11575;old_locus_tag=PHA55_11570
NZ_CP116044.1	Protein Homology	CDS	2365649	2367922	.	-	0	ID=cds-WP_000535468.1;Parent=gene-PHA55_RS11575;Dbxref=Genbank:WP_000535468.1;Name=WP_000535468.1;Ontology_term=GO:0009308,GO:0005507,GO:0008131,GO:0048038;gbkey=CDS;gene=tynA;go_function=copper ion binding|0005507||IEA,primary amine oxidase activity|0008131||IEA,quinone binding|0048038||IEA;go_process=amine metabolic process|0009308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415904.3;locus_tag=PHA55_RS11575;product=primary-amine oxidase;protein_id=WP_000535468.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2368170	2370215	.	-	.	ID=gene-PHA55_RS11580;Name=paaZ;gbkey=Gene;gene=paaZ;gene_biotype=protein_coding;locus_tag=PHA55_RS11580;old_locus_tag=PHA55_11575
NZ_CP116044.1	Protein Homology	CDS	2368170	2370215	.	-	0	ID=cds-WP_001186476.1;Parent=gene-PHA55_RS11580;Dbxref=Genbank:WP_001186476.1;Name=WP_001186476.1;gbkey=CDS;gene=paaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415905.1;locus_tag=PHA55_RS11580;product=phenylacetic acid degradation bifunctional protein PaaZ;protein_id=WP_001186476.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2370500	2371429	.	+	.	ID=gene-PHA55_RS11585;Name=paaA;gbkey=Gene;gene=paaA;gene_biotype=protein_coding;locus_tag=PHA55_RS11585;old_locus_tag=PHA55_11580
NZ_CP116044.1	Protein Homology	CDS	2370500	2371429	.	+	0	ID=cds-WP_000191067.1;Parent=gene-PHA55_RS11585;Dbxref=Genbank:WP_000191067.1;Name=WP_000191067.1;Ontology_term=GO:0010124,GO:0097266;gbkey=CDS;gene=paaA;go_function=phenylacetyl-CoA 1%2C2-epoxidase activity|0097266||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415906.1;locus_tag=PHA55_RS11585;product=1%2C2-phenylacetyl-CoA epoxidase subunit A;protein_id=WP_000191067.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2371441	2371728	.	+	.	ID=gene-PHA55_RS11590;Name=paaB;gbkey=Gene;gene=paaB;gene_biotype=protein_coding;locus_tag=PHA55_RS11590;old_locus_tag=PHA55_11585
NZ_CP116044.1	Protein Homology	CDS	2371441	2371728	.	+	0	ID=cds-WP_000073393.1;Parent=gene-PHA55_RS11590;Dbxref=Genbank:WP_000073393.1;Name=WP_000073393.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaB;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415907.1;locus_tag=PHA55_RS11590;product=1%2C2-phenylacetyl-CoA epoxidase subunit B;protein_id=WP_000073393.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2371737	2372483	.	+	.	ID=gene-PHA55_RS11595;Name=paaC;gbkey=Gene;gene=paaC;gene_biotype=protein_coding;locus_tag=PHA55_RS11595;old_locus_tag=PHA55_11590
NZ_CP116044.1	Protein Homology	CDS	2371737	2372483	.	+	0	ID=cds-WP_001072831.1;Parent=gene-PHA55_RS11595;Dbxref=Genbank:WP_001072831.1;Name=WP_001072831.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaC;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415908.1;locus_tag=PHA55_RS11595;product=phenylacetate-CoA oxygenase subunit PaaC;protein_id=WP_001072831.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2372498	2372995	.	+	.	ID=gene-PHA55_RS11600;Name=paaD;gbkey=Gene;gene=paaD;gene_biotype=protein_coding;locus_tag=PHA55_RS11600;old_locus_tag=PHA55_11595
NZ_CP116044.1	Protein Homology	CDS	2372498	2372995	.	+	0	ID=cds-WP_001189206.1;Parent=gene-PHA55_RS11600;Dbxref=Genbank:WP_001189206.1;Name=WP_001189206.1;gbkey=CDS;gene=paaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415909.4;locus_tag=PHA55_RS11600;product=phenylacetate degradation protein PaaD;protein_id=WP_001189206.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2373003	2374073	.	+	.	ID=gene-PHA55_RS11605;Name=paaK;gbkey=Gene;gene=paaK;gene_biotype=protein_coding;locus_tag=PHA55_RS11605;old_locus_tag=PHA55_11600
NZ_CP116044.1	Protein Homology	CDS	2373003	2374073	.	+	0	ID=cds-WP_000206374.1;Parent=gene-PHA55_RS11605;Dbxref=Genbank:WP_000206374.1;Name=WP_000206374.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaK;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415910.1;locus_tag=PHA55_RS11605;product=phenylacetate-CoA oxygenase/reductase subunit PaaK;protein_id=WP_000206374.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2374070	2374837	.	+	.	ID=gene-PHA55_RS11610;Name=paaF;gbkey=Gene;gene=paaF;gene_biotype=protein_coding;locus_tag=PHA55_RS11610;old_locus_tag=PHA55_11605
NZ_CP116044.1	Protein Homology	CDS	2374070	2374837	.	+	0	ID=cds-WP_001292341.1;Parent=gene-PHA55_RS11610;Dbxref=Genbank:WP_001292341.1;Name=WP_001292341.1;gbkey=CDS;gene=paaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415911.1;locus_tag=PHA55_RS11610;product=2%2C3-dehydroadipyl-CoA hydratase;protein_id=WP_001292341.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2374837	2375625	.	+	.	ID=gene-PHA55_RS11615;Name=paaG;gbkey=Gene;gene=paaG;gene_biotype=protein_coding;locus_tag=PHA55_RS11615;old_locus_tag=PHA55_11610
NZ_CP116044.1	Protein Homology	CDS	2374837	2375625	.	+	0	ID=cds-WP_000969792.1;Parent=gene-PHA55_RS11615;Dbxref=Genbank:WP_000969792.1;Name=WP_000969792.1;Ontology_term=GO:0010124,GO:0004300;gbkey=CDS;gene=paaG;go_function=enoyl-CoA hydratase activity|0004300||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415912.1;locus_tag=PHA55_RS11615;product=2-(1%2C2-epoxy-1%2C2-dihydrophenyl)acetyl-CoA isomerase PaaG;protein_id=WP_000969792.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2375627	2377054	.	+	.	ID=gene-PHA55_RS11620;Name=paaC;gbkey=Gene;gene=paaC;gene_biotype=protein_coding;locus_tag=PHA55_RS11620;old_locus_tag=PHA55_11615
NZ_CP116044.1	Protein Homology	CDS	2375627	2377054	.	+	0	ID=cds-WP_000973371.1;Parent=gene-PHA55_RS11620;Dbxref=Genbank:WP_000973371.1;Name=WP_000973371.1;Ontology_term=GO:0006631,GO:0010124,GO:0008691,GO:0070403;gbkey=CDS;gene=paaC;go_function=3-hydroxybutyryl-CoA dehydrogenase activity|0008691||IEA,NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA,phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415913.1;locus_tag=PHA55_RS11620;product=3-hydroxyacyl-CoA dehydrogenase PaaC;protein_id=WP_000973371.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2377044	2377466	.	+	.	ID=gene-PHA55_RS11625;Name=paaI;gbkey=Gene;gene=paaI;gene_biotype=protein_coding;locus_tag=PHA55_RS11625;old_locus_tag=PHA55_11620
NZ_CP116044.1	Protein Homology	CDS	2377044	2377466	.	+	0	ID=cds-WP_000018413.1;Parent=gene-PHA55_RS11625;Dbxref=Genbank:WP_000018413.1;Name=WP_000018413.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaI;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415914.1;locus_tag=PHA55_RS11625;product=hydroxyphenylacetyl-CoA thioesterase PaaI;protein_id=WP_000018413.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2377466	2378671	.	+	.	ID=gene-PHA55_RS11630;Name=paaJ;gbkey=Gene;gene=paaJ;gene_biotype=protein_coding;gene_synonym=paaE,ydbW;locus_tag=PHA55_RS11630;old_locus_tag=PHA55_11625
NZ_CP116044.1	Protein Homology	CDS	2377466	2378671	.	+	0	ID=cds-WP_001206190.1;Parent=gene-PHA55_RS11630;Dbxref=Genbank:WP_001206190.1;Name=WP_001206190.1;gbkey=CDS;gene=paaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415915.1;locus_tag=PHA55_RS11630;product=bifunctional 3-oxoadipyl-CoA/3-oxo-5%2C6-dehydrosuberyl-CoA thiolase;protein_id=WP_001206190.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2378698	2380011	.	+	.	ID=gene-PHA55_RS11635;Name=paaF;gbkey=Gene;gene=paaF;gene_biotype=protein_coding;locus_tag=PHA55_RS11635;old_locus_tag=PHA55_11630
NZ_CP116044.1	Protein Homology	CDS	2378698	2380011	.	+	0	ID=cds-WP_000632286.1;Parent=gene-PHA55_RS11635;Dbxref=Genbank:WP_000632286.1;Name=WP_000632286.1;Ontology_term=GO:0010124,GO:0047475;gbkey=CDS;gene=paaF;go_function=phenylacetate-CoA ligase activity|0047475||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415916.1;locus_tag=PHA55_RS11635;product=phenylacetate--CoA ligase;protein_id=WP_000632286.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2380112	2381062	.	+	.	ID=gene-PHA55_RS11640;Name=paaX;gbkey=Gene;gene=paaX;gene_biotype=protein_coding;locus_tag=PHA55_RS11640;old_locus_tag=PHA55_11635
NZ_CP116044.1	Protein Homology	CDS	2380112	2381062	.	+	0	ID=cds-WP_000039892.1;Parent=gene-PHA55_RS11640;Dbxref=Genbank:WP_000039892.1;Name=WP_000039892.1;Ontology_term=GO:0006351;gbkey=CDS;gene=paaX;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415917.1;locus_tag=PHA55_RS11640;product=phenylacetic acid degradation operon negative regulatory protein PaaX;protein_id=WP_000039892.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2381044	2381634	.	+	.	ID=gene-PHA55_RS11645;Name=paaY;gbkey=Gene;gene=paaY;gene_biotype=protein_coding;locus_tag=PHA55_RS11645;old_locus_tag=PHA55_11640
NZ_CP116044.1	Protein Homology	CDS	2381044	2381634	.	+	0	ID=cds-WP_001123457.1;Parent=gene-PHA55_RS11645;Dbxref=Genbank:WP_001123457.1;Name=WP_001123457.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaY;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415918.1;locus_tag=PHA55_RS11645;product=phenylacetic acid degradation protein PaaY;protein_id=WP_001123457.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2381866	2382726	.	+	.	ID=gene-PHA55_RS11650;Name=pdxI;gbkey=Gene;gene=pdxI;gene_biotype=protein_coding;locus_tag=PHA55_RS11650;old_locus_tag=PHA55_11645
NZ_CP116044.1	Protein Homology	CDS	2381866	2382726	.	+	0	ID=cds-WP_000097794.1;Parent=gene-PHA55_RS11650;Dbxref=Genbank:WP_000097794.1;Name=WP_000097794.1;gbkey=CDS;gene=pdxI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415924.1;locus_tag=PHA55_RS11650;product=pyridoxine 4-dehydrogenase;protein_id=WP_000097794.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2382790	2385096	.	+	.	ID=gene-PHA55_RS11655;Name=ydbD;gbkey=Gene;gene=ydbD;gene_biotype=protein_coding;locus_tag=PHA55_RS11655;old_locus_tag=PHA55_11650
NZ_CP116044.1	Protein Homology	CDS	2382790	2385096	.	+	0	ID=cds-WP_000471490.1;Parent=gene-PHA55_RS11655;Dbxref=Genbank:WP_000471490.1;Name=WP_000471490.1;gbkey=CDS;gene=ydbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415925.2;locus_tag=PHA55_RS11655;product=DUF2773 domain-containing bactofilin;protein_id=WP_000471490.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2385267	2385872	.	+	.	ID=gene-PHA55_RS11660;Name=ynbA;gbkey=Gene;gene=ynbA;gene_biotype=protein_coding;locus_tag=PHA55_RS11660;old_locus_tag=PHA55_11655
NZ_CP116044.1	Protein Homology	CDS	2385267	2385872	.	+	0	ID=cds-WP_000177537.1;Parent=gene-PHA55_RS11660;Dbxref=Genbank:WP_000177537.1;Name=WP_000177537.1;gbkey=CDS;gene=ynbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310037.2;locus_tag=PHA55_RS11660;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_000177537.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2385872	2386768	.	+	.	ID=gene-PHA55_RS11665;Name=ynbB;gbkey=Gene;gene=ynbB;gene_biotype=protein_coding;locus_tag=PHA55_RS11665;old_locus_tag=PHA55_11660
NZ_CP116044.1	Protein Homology	CDS	2385872	2386768	.	+	0	ID=cds-WP_000890931.1;Parent=gene-PHA55_RS11665;Dbxref=Genbank:WP_000890931.1;Name=WP_000890931.1;gbkey=CDS;gene=ynbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415927.1;locus_tag=PHA55_RS11665;product=phosphatidate cytidylyltransferase;protein_id=WP_000890931.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2386784	2388541	.	+	.	ID=gene-PHA55_RS11670;Name=ynbC;gbkey=Gene;gene=ynbC;gene_biotype=protein_coding;locus_tag=PHA55_RS11670;old_locus_tag=PHA55_11665
NZ_CP116044.1	Protein Homology	CDS	2386784	2388541	.	+	0	ID=cds-WP_260589778.1;Parent=gene-PHA55_RS11670;Dbxref=Genbank:WP_260589778.1;Name=WP_260589778.1;gbkey=CDS;gene=ynbC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310039.1;locus_tag=PHA55_RS11670;product=bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase;protein_id=WP_260589778.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2388531	2389847	.	+	.	ID=gene-PHA55_RS11675;Name=ynbD;gbkey=Gene;gene=ynbD;gene_biotype=protein_coding;locus_tag=PHA55_RS11675;old_locus_tag=PHA55_11670
NZ_CP116044.1	Protein Homology	CDS	2388531	2389847	.	+	0	ID=cds-WP_260589779.1;Parent=gene-PHA55_RS11675;Dbxref=Genbank:WP_260589779.1;Name=WP_260589779.1;gbkey=CDS;gene=ynbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310040.2;locus_tag=PHA55_RS11675;product=phosphatase PAP2/dual specificity phosphatase family protein;protein_id=WP_260589779.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2389898	2390503	.	-	.	ID=gene-PHA55_RS11680;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=PHA55_RS11680;old_locus_tag=PHA55_11675
NZ_CP116044.1	Protein Homology	CDS	2389898	2390503	.	-	0	ID=cds-WP_000048948.1;Parent=gene-PHA55_RS11680;Dbxref=Genbank:WP_000048948.1;Name=WP_000048948.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310041.1;locus_tag=PHA55_RS11680;product=FMN-dependent NADH-azoreductase;protein_id=WP_000048948.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2390704	2394606	.	+	.	ID=gene-PHA55_RS11685;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=PHA55_RS11685;old_locus_tag=PHA55_11680
NZ_CP116044.1	Protein Homology	CDS	2390704	2394606	.	+	0	ID=cds-WP_000139567.1;Parent=gene-PHA55_RS11685;Dbxref=Genbank:WP_000139567.1;Name=WP_000139567.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415931.4;locus_tag=PHA55_RS11685;product=ATP-dependent RNA helicase HrpA;protein_id=WP_000139567.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2394878	2395678	.	+	.	ID=gene-PHA55_RS11690;Name=ydcF;gbkey=Gene;gene=ydcF;gene_biotype=protein_coding;locus_tag=PHA55_RS11690;old_locus_tag=PHA55_11685
NZ_CP116044.1	Protein Homology	CDS	2394878	2395678	.	+	0	ID=cds-WP_001027931.1;Parent=gene-PHA55_RS11690;Dbxref=Genbank:WP_001027931.1;Name=WP_001027931.1;gbkey=CDS;gene=ydcF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415932.1;locus_tag=PHA55_RS11690;product=DUF218 domain-containing protein YdcF;protein_id=WP_001027931.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	2395875	2397313	.	+	.	ID=gene-PHA55_RS11695;Name=aldA;gbkey=Gene;gene=aldA;gene_biotype=pseudogene;locus_tag=PHA55_RS11695;old_locus_tag=PHA55_11690;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	2395875	2397313	.	+	0	ID=cds-PHA55_RS11695;Parent=gene-PHA55_RS11695;Note=frameshifted;Ontology_term=GO:0016620;gbkey=CDS;gene=aldA;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310048.1;locus_tag=PHA55_RS11695;product=aldehyde dehydrogenase;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	2397355	2398356	.	-	.	ID=gene-PHA55_RS11700;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=PHA55_RS11700;old_locus_tag=PHA55_11695
NZ_CP116044.1	Protein Homology	CDS	2397355	2398356	.	-	0	ID=cds-WP_000048667.1;Parent=gene-PHA55_RS11700;Dbxref=Genbank:WP_000048667.1;Name=WP_000048667.1;Ontology_term=GO:0006094,GO:0006096,GO:0019682;gbkey=CDS;gene=gap;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA,glyceraldehyde-3-phosphate metabolic process|0019682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310049.1;locus_tag=PHA55_RS11700;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_000048667.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2398545	2399075	.	+	.	ID=gene-PHA55_RS11705;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=PHA55_RS11705;old_locus_tag=PHA55_11700
NZ_CP116044.1	Protein Homology	CDS	2398545	2399075	.	+	0	ID=cds-WP_001307188.1;Parent=gene-PHA55_RS11705;Dbxref=Genbank:WP_001307188.1;Name=WP_001307188.1;Ontology_term=GO:0022904,GO:0009055,GO:0016020;gbkey=CDS;gene=cybB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415935.2;locus_tag=PHA55_RS11705;product=cytochrome b561;protein_id=WP_001307188.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2399320	2399493	.	+	.	ID=gene-PHA55_RS11710;Name=PHA55_RS11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11710;old_locus_tag=PHA55_11705
NZ_CP116044.1	Protein Homology	CDS	2399320	2399493	.	+	0	ID=cds-WP_000731833.1;Parent=gene-PHA55_RS11710;Dbxref=Genbank:WP_000731833.1;Name=WP_000731833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415936.1;locus_tag=PHA55_RS11710;product=periplasmic protein;protein_id=WP_000731833.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2399519	2399587	.	+	.	ID=gene-PHA55_RS11715;Name=yncP;gbkey=Gene;gene=yncP;gene_biotype=protein_coding;locus_tag=PHA55_RS11715;old_locus_tag=PHA55_11710
NZ_CP116044.1	Protein Homology	CDS	2399519	2399587	.	+	0	ID=cds-WP_212591405.1;Parent=gene-PHA55_RS11715;Dbxref=Genbank:WP_212591405.1;Name=WP_212591405.1;gbkey=CDS;gene=yncP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051184.1;locus_tag=PHA55_RS11715;product=hypothetical protein;protein_id=WP_212591405.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2399565	2399696	.	-	.	ID=gene-PHA55_RS11720;Name=PHA55_RS11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11720;old_locus_tag=PHA55_11715
NZ_CP116044.1	Protein Homology	CDS	2399565	2399696	.	-	0	ID=cds-WP_228940733.1;Parent=gene-PHA55_RS11720;Dbxref=Genbank:WP_228940733.1;Name=WP_228940733.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007753358.1;locus_tag=PHA55_RS11720;product=type I toxin-antitoxin system Hok family toxin;protein_id=WP_228940733.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	2399635	2399772	.	-	.	ID=gene-PHA55_RS11725;Name=PHA55_RS11725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS11725;old_locus_tag=PHA55_11720;partial=true;pseudo=true;start_range=.,2399635
NZ_CP116044.1	Protein Homology	CDS	2399635	2399772	.	-	0	ID=cds-PHA55_RS11725;Parent=gene-PHA55_RS11725;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013968.2;locus_tag=PHA55_RS11725;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2399635;transl_table=11
NZ_CP116044.1	RefSeq	gene	2400113	2401753	.	+	.	ID=gene-PHA55_RS11730;Name=trg;gbkey=Gene;gene=trg;gene_biotype=protein_coding;locus_tag=PHA55_RS11730;old_locus_tag=PHA55_11725
NZ_CP116044.1	Protein Homology	CDS	2400113	2401753	.	+	0	ID=cds-WP_001098532.1;Parent=gene-PHA55_RS11730;Dbxref=Genbank:WP_001098532.1;Name=WP_001098532.1;gbkey=CDS;gene=trg;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415938.1;locus_tag=PHA55_RS11730;product=methyl-accepting chemotaxis protein Trg;protein_id=WP_001098532.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2401791	2402714	.	-	.	ID=gene-PHA55_RS11735;Name=ydcI;gbkey=Gene;gene=ydcI;gene_biotype=protein_coding;locus_tag=PHA55_RS11735;old_locus_tag=PHA55_11730
NZ_CP116044.1	Protein Homology	CDS	2401791	2402714	.	-	0	ID=cds-WP_000414560.1;Parent=gene-PHA55_RS11735;Dbxref=Genbank:WP_000414560.1;Name=WP_000414560.1;gbkey=CDS;gene=ydcI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310054.2;locus_tag=PHA55_RS11735;product=LysR substrate-binding domain-containing protein;protein_id=WP_000414560.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2402931	2404274	.	+	.	ID=gene-PHA55_RS11740;Name=ydcJ;gbkey=Gene;gene=ydcJ;gene_biotype=protein_coding;locus_tag=PHA55_RS11740;old_locus_tag=PHA55_11735
NZ_CP116044.1	Protein Homology	CDS	2402931	2404274	.	+	0	ID=cds-WP_271287552.1;Parent=gene-PHA55_RS11740;Dbxref=Genbank:WP_271287552.1;Name=WP_271287552.1;gbkey=CDS;gene=ydcJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415940.1;locus_tag=PHA55_RS11740;product=VOC family protein;protein_id=WP_271287552.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2404499	2406154	.	+	.	ID=gene-PHA55_RS11745;Name=opgD;gbkey=Gene;gene=opgD;gene_biotype=protein_coding;gene_synonym=mdoD;locus_tag=PHA55_RS11745;old_locus_tag=PHA55_11740
NZ_CP116044.1	Protein Homology	CDS	2404499	2406154	.	+	0	ID=cds-WP_000375956.1;Parent=gene-PHA55_RS11745;Dbxref=Genbank:WP_000375956.1;Name=WP_000375956.1;gbkey=CDS;gene=opgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707648.1;locus_tag=PHA55_RS11745;product=glucan biosynthesis protein OpgD;protein_id=WP_000375956.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2406294	2406518	.	+	.	ID=gene-PHA55_RS11750;Name=ydcH;gbkey=Gene;gene=ydcH;gene_biotype=protein_coding;locus_tag=PHA55_RS11750;old_locus_tag=PHA55_11745
NZ_CP116044.1	Protein Homology	CDS	2406294	2406518	.	+	0	ID=cds-WP_001296778.1;Parent=gene-PHA55_RS11750;Dbxref=Genbank:WP_001296778.1;Name=WP_001296778.1;gbkey=CDS;gene=ydcH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415943.4;locus_tag=PHA55_RS11750;product=YdcH family protein;protein_id=WP_001296778.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2406581	2407117	.	+	.	ID=gene-PHA55_RS11755;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;locus_tag=PHA55_RS11755;old_locus_tag=PHA55_11750
NZ_CP116044.1	Protein Homology	CDS	2406581	2407117	.	+	0	ID=cds-WP_000140887.1;Parent=gene-PHA55_RS11755;Dbxref=Genbank:WP_000140887.1;Name=WP_000140887.1;gbkey=CDS;gene=rimL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707645.2;locus_tag=PHA55_RS11755;product=50S ribosomal protein L7/L12-serine acetyltransferase;protein_id=WP_000140887.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2407112	2408092	.	-	.	ID=gene-PHA55_RS11760;Name=ydcK;gbkey=Gene;gene=ydcK;gene_biotype=protein_coding;locus_tag=PHA55_RS11760;old_locus_tag=PHA55_11755
NZ_CP116044.1	Protein Homology	CDS	2407112	2408092	.	-	0	ID=cds-WP_001234039.1;Parent=gene-PHA55_RS11760;Dbxref=Genbank:WP_001234039.1;Name=WP_001234039.1;gbkey=CDS;gene=ydcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415945.1;locus_tag=PHA55_RS11760;product=YdcK family protein;protein_id=WP_001234039.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2408216	2409208	.	+	.	ID=gene-PHA55_RS11765;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=PHA55_RS11765;old_locus_tag=PHA55_11760
NZ_CP116044.1	Protein Homology	CDS	2408216	2409208	.	+	0	ID=cds-WP_001296725.1;Parent=gene-PHA55_RS11765;Dbxref=Genbank:WP_001296725.1;Name=WP_001296725.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tehA;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310061.1;locus_tag=PHA55_RS11765;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=WP_001296725.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2409205	2409798	.	+	.	ID=gene-PHA55_RS11770;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=PHA55_RS11770;old_locus_tag=PHA55_11765
NZ_CP116044.1	Protein Homology	CDS	2409205	2409798	.	+	0	ID=cds-WP_000586733.1;Parent=gene-PHA55_RS11770;Dbxref=Genbank:WP_000586733.1;Name=WP_000586733.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415947.1;locus_tag=PHA55_RS11770;product=tellurite resistance methyltransferase TehB;protein_id=WP_000586733.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2410101	2410769	.	+	.	ID=gene-PHA55_RS11775;Name=ydcL;gbkey=Gene;gene=ydcL;gene_biotype=protein_coding;locus_tag=PHA55_RS11775;old_locus_tag=PHA55_11770
NZ_CP116044.1	Protein Homology	CDS	2410101	2410769	.	+	0	ID=cds-WP_001261013.1;Parent=gene-PHA55_RS11775;Dbxref=Genbank:WP_001261013.1;Name=WP_001261013.1;gbkey=CDS;gene=ydcL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310063.1;locus_tag=PHA55_RS11775;product=DUF3313 domain-containing protein;protein_id=WP_001261013.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	2410787	2411288	.	-	.	ID=gene-PHA55_RS11780;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=PHA55_RS11780;old_locus_tag=PHA55_11775;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	2410787	2411288	.	-	0	ID=cds-PHA55_RS11780;Parent=gene-PHA55_RS11780;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313209.1;locus_tag=PHA55_RS11780;product=IS200/IS605 family transposase;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	2411296	2412504	.	+	.	ID=gene-PHA55_RS11785;Name=insQ;gbkey=Gene;gene=insQ;gene_biotype=protein_coding;locus_tag=PHA55_RS11785;old_locus_tag=PHA55_11780
NZ_CP116044.1	Protein Homology	CDS	2411296	2412504	.	+	0	ID=cds-WP_024195537.1;Parent=gene-PHA55_RS11785;Dbxref=Genbank:WP_024195537.1;Name=WP_024195537.1;gbkey=CDS;gene=insQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415949.3;locus_tag=PHA55_RS11785;product=RNA-guided endonuclease TnpB family protein;protein_id=WP_024195537.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2412544	2413758	.	-	.	ID=gene-PHA55_RS11790;Name=ydcO;gbkey=Gene;gene=ydcO;gene_biotype=protein_coding;locus_tag=PHA55_RS11790;old_locus_tag=PHA55_11785
NZ_CP116044.1	Protein Homology	CDS	2412544	2413758	.	-	0	ID=cds-WP_071601296.1;Parent=gene-PHA55_RS11790;Dbxref=Genbank:WP_071601296.1;Name=WP_071601296.1;gbkey=CDS;gene=ydcO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748359.1;locus_tag=PHA55_RS11790;product=BenE family transporter YdcO;protein_id=WP_071601296.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2413811	2414347	.	+	.	ID=gene-PHA55_RS11795;Name=sutR;gbkey=Gene;gene=sutR;gene_biotype=protein_coding;locus_tag=PHA55_RS11795;old_locus_tag=PHA55_11790
NZ_CP116044.1	Protein Homology	CDS	2413811	2414347	.	+	0	ID=cds-WP_000429155.1;Parent=gene-PHA55_RS11795;Dbxref=Genbank:WP_000429155.1;Name=WP_000429155.1;gbkey=CDS;gene=sutR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415951.1;locus_tag=PHA55_RS11795;product=DNA-binding transcriptional regulator SutR;protein_id=WP_000429155.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2414420	2416381	.	+	.	ID=gene-PHA55_RS11800;Name=rlhA;gbkey=Gene;gene=rlhA;gene_biotype=protein_coding;locus_tag=PHA55_RS11800;old_locus_tag=PHA55_11795
NZ_CP116044.1	Protein Homology	CDS	2414420	2416381	.	+	0	ID=cds-WP_001301045.1;Parent=gene-PHA55_RS11800;Dbxref=Genbank:WP_001301045.1;Name=WP_001301045.1;gbkey=CDS;gene=rlhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415952.2;locus_tag=PHA55_RS11800;product=23S rRNA 5-hydroxycytidine C2501 synthase;protein_id=WP_001301045.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2416473	2416703	.	-	.	ID=gene-PHA55_RS11805;Name=yncJ;gbkey=Gene;gene=yncJ;gene_biotype=protein_coding;locus_tag=PHA55_RS11805;old_locus_tag=PHA55_11800
NZ_CP116044.1	Protein Homology	CDS	2416473	2416703	.	-	0	ID=cds-WP_000494244.1;Parent=gene-PHA55_RS11805;Dbxref=Genbank:WP_000494244.1;Name=WP_000494244.1;gbkey=CDS;gene=yncJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415953.1;locus_tag=PHA55_RS11805;product=YncJ family protein;protein_id=WP_000494244.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2416925	2417101	.	+	.	ID=gene-PHA55_RS11810;Name=hicA;gbkey=Gene;gene=hicA;gene_biotype=protein_coding;locus_tag=PHA55_RS11810;old_locus_tag=PHA55_11805
NZ_CP116044.1	Protein Homology	CDS	2416925	2417101	.	+	0	ID=cds-WP_000813794.1;Parent=gene-PHA55_RS11810;Dbxref=Genbank:WP_000813794.1;Name=WP_000813794.1;gbkey=CDS;gene=hicA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415954.2;locus_tag=PHA55_RS11810;product=type II toxin-antitoxin system mRNA interferase toxin HicA;protein_id=WP_000813794.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2417147	2417563	.	+	.	ID=gene-PHA55_RS11815;Name=hicB;gbkey=Gene;gene=hicB;gene_biotype=protein_coding;locus_tag=PHA55_RS11815;old_locus_tag=PHA55_11810
NZ_CP116044.1	Protein Homology	CDS	2417147	2417563	.	+	0	ID=cds-WP_001270286.1;Parent=gene-PHA55_RS11815;Dbxref=Genbank:WP_001270286.1;Name=WP_001270286.1;gbkey=CDS;gene=hicB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415955.2;locus_tag=PHA55_RS11815;product=type II toxin-antitoxin system antitoxin HicB;protein_id=WP_001270286.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2417642	2419048	.	+	.	ID=gene-PHA55_RS11820;Name=ydcR;gbkey=Gene;gene=ydcR;gene_biotype=protein_coding;locus_tag=PHA55_RS11820;old_locus_tag=PHA55_11815
NZ_CP116044.1	Protein Homology	CDS	2417642	2419048	.	+	0	ID=cds-WP_000760629.1;Parent=gene-PHA55_RS11820;Dbxref=Genbank:WP_000760629.1;Name=WP_000760629.1;gbkey=CDS;gene=ydcR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415956.1;locus_tag=PHA55_RS11820;product=PLP-dependent aminotransferase family protein;protein_id=WP_000760629.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2419293	2420438	.	+	.	ID=gene-PHA55_RS11825;Name=ydcS;gbkey=Gene;gene=ydcS;gene_biotype=protein_coding;locus_tag=PHA55_RS11825;old_locus_tag=PHA55_11820
NZ_CP116044.1	Protein Homology	CDS	2419293	2420438	.	+	0	ID=cds-WP_000047456.1;Parent=gene-PHA55_RS11825;Dbxref=Genbank:WP_000047456.1;Name=WP_000047456.1;gbkey=CDS;gene=ydcS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415957.1;locus_tag=PHA55_RS11825;product=ABC transporter substrate-binding protein;protein_id=WP_000047456.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2420456	2421469	.	+	.	ID=gene-PHA55_RS11830;Name=ydcT;gbkey=Gene;gene=ydcT;gene_biotype=protein_coding;locus_tag=PHA55_RS11830;old_locus_tag=PHA55_11825
NZ_CP116044.1	Protein Homology	CDS	2420456	2421469	.	+	0	ID=cds-WP_000220396.1;Parent=gene-PHA55_RS11830;Dbxref=Genbank:WP_000220396.1;Name=WP_000220396.1;gbkey=CDS;gene=ydcT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415958.1;locus_tag=PHA55_RS11830;product=ABC transporter ATP-binding protein;protein_id=WP_000220396.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2421470	2422411	.	+	.	ID=gene-PHA55_RS11835;Name=ydcU;gbkey=Gene;gene=ydcU;gene_biotype=protein_coding;locus_tag=PHA55_RS11835;old_locus_tag=PHA55_11830
NZ_CP116044.1	Protein Homology	CDS	2421470	2422411	.	+	0	ID=cds-WP_001251315.1;Parent=gene-PHA55_RS11835;Dbxref=Genbank:WP_001251315.1;Name=WP_001251315.1;gbkey=CDS;gene=ydcU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310073.1;locus_tag=PHA55_RS11835;product=ABC transporter permease;protein_id=WP_001251315.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2422401	2423195	.	+	.	ID=gene-PHA55_RS11840;Name=ydcV;gbkey=Gene;gene=ydcV;gene_biotype=protein_coding;locus_tag=PHA55_RS11840;old_locus_tag=PHA55_11835
NZ_CP116044.1	Protein Homology	CDS	2422401	2423195	.	+	0	ID=cds-WP_000555483.1;Parent=gene-PHA55_RS11840;Dbxref=Genbank:WP_000555483.1;Name=WP_000555483.1;gbkey=CDS;gene=ydcV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310074.1;locus_tag=PHA55_RS11840;product=ABC transporter permease;protein_id=WP_000555483.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2423217	2424641	.	+	.	ID=gene-PHA55_RS11845;Name=patD;gbkey=Gene;gene=patD;gene_biotype=protein_coding;locus_tag=PHA55_RS11845;old_locus_tag=PHA55_11840
NZ_CP116044.1	Protein Homology	CDS	2423217	2424641	.	+	0	ID=cds-WP_001163892.1;Parent=gene-PHA55_RS11845;Dbxref=Genbank:WP_001163892.1;Name=WP_001163892.1;Ontology_term=GO:0009447,GO:0019145;gbkey=CDS;gene=patD;go_function=aminobutyraldehyde dehydrogenase activity|0019145||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415961.1;locus_tag=PHA55_RS11845;product=aminobutyraldehyde dehydrogenase;protein_id=WP_001163892.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2424851	2425660	.	+	.	ID=gene-PHA55_RS11850;Name=PHA55_RS11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11850;old_locus_tag=PHA55_11845
NZ_CP116044.1	Protein Homology	CDS	2424851	2425660	.	+	0	ID=cds-WP_260589780.1;Parent=gene-PHA55_RS11850;Dbxref=Genbank:WP_260589780.1;Name=WP_260589780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707637.1;locus_tag=PHA55_RS11850;product=CatB-related O-acetyltransferase;protein_id=WP_260589780.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2426062	2426157	.	-	.	ID=gene-PHA55_RS11855;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;locus_tag=PHA55_RS11855;old_locus_tag=PHA55_11850
NZ_CP116044.1	Protein Homology	CDS	2426062	2426157	.	-	0	ID=cds-WP_001303494.1;Parent=gene-PHA55_RS11855;Dbxref=Genbank:WP_001303494.1;Name=WP_001303494.1;gbkey=CDS;gene=yncL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165318.1;locus_tag=PHA55_RS11855;product=stress response membrane protein YncL;protein_id=WP_001303494.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2426352	2426525	.	+	.	ID=gene-PHA55_RS11860;Name=ortT;gbkey=Gene;gene=ortT;gene_biotype=protein_coding;locus_tag=PHA55_RS11860;old_locus_tag=PHA55_11855
NZ_CP116044.1	Protein Homology	CDS	2426352	2426525	.	+	0	ID=cds-WP_000061178.1;Parent=gene-PHA55_RS11860;Dbxref=Genbank:WP_000061178.1;Name=WP_000061178.1;gbkey=CDS;gene=ortT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415962.2;locus_tag=PHA55_RS11860;product=orphan toxin OrtT;protein_id=WP_000061178.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2426611	2426844	.	+	.	ID=gene-PHA55_RS11865;Name=ydcY;gbkey=Gene;gene=ydcY;gene_biotype=protein_coding;locus_tag=PHA55_RS11865;old_locus_tag=PHA55_11860
NZ_CP116044.1	Protein Homology	CDS	2426611	2426844	.	+	0	ID=cds-WP_000018633.1;Parent=gene-PHA55_RS11865;Dbxref=Genbank:WP_000018633.1;Name=WP_000018633.1;gbkey=CDS;gene=ydcY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310077.1;locus_tag=PHA55_RS11865;product=DUF2526 family protein YdcY;protein_id=WP_000018633.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2426845	2427294	.	-	.	ID=gene-PHA55_RS11870;Name=ydcZ;gbkey=Gene;gene=ydcZ;gene_biotype=protein_coding;locus_tag=PHA55_RS11870;old_locus_tag=PHA55_11865
NZ_CP116044.1	Protein Homology	CDS	2426845	2427294	.	-	0	ID=cds-WP_001076535.1;Parent=gene-PHA55_RS11870;Dbxref=Genbank:WP_001076535.1;Name=WP_001076535.1;gbkey=CDS;gene=ydcZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415964.1;locus_tag=PHA55_RS11870;product=DMT family transporter;protein_id=WP_001076535.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2427291	2427809	.	-	.	ID=gene-PHA55_RS11875;Name=mddA;gbkey=Gene;gene=mddA;gene_biotype=protein_coding;locus_tag=PHA55_RS11875;old_locus_tag=PHA55_11870
NZ_CP116044.1	Protein Homology	CDS	2427291	2427809	.	-	0	ID=cds-WP_000027563.1;Parent=gene-PHA55_RS11875;Dbxref=Genbank:WP_000027563.1;Name=WP_000027563.1;gbkey=CDS;gene=mddA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310079.1;locus_tag=PHA55_RS11875;product=L-methionine sulfoximine/L-methionine sulfone acetyltransferase;protein_id=WP_000027563.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2427990	2429027	.	+	.	ID=gene-PHA55_RS11880;Name=curA;gbkey=Gene;gene=curA;gene_biotype=protein_coding;locus_tag=PHA55_RS11880;old_locus_tag=PHA55_11875
NZ_CP116044.1	Protein Homology	CDS	2427990	2429027	.	+	0	ID=cds-WP_001351469.1;Parent=gene-PHA55_RS11880;Dbxref=Genbank:WP_001351469.1;Name=WP_001351469.1;gbkey=CDS;gene=curA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415966.6;locus_tag=PHA55_RS11880;product=NADPH-dependent curcumin/dihydrocurcumin reductase;protein_id=WP_001351469.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2429225	2429890	.	+	.	ID=gene-PHA55_RS11885;Name=mcbR;gbkey=Gene;gene=mcbR;gene_biotype=protein_coding;locus_tag=PHA55_RS11885;old_locus_tag=PHA55_11880
NZ_CP116044.1	Protein Homology	CDS	2429225	2429890	.	+	0	ID=cds-WP_001307192.1;Parent=gene-PHA55_RS11885;Dbxref=Genbank:WP_001307192.1;Name=WP_001307192.1;gbkey=CDS;gene=mcbR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415967.2;locus_tag=PHA55_RS11885;product=colanic acid/biofilm transcriptional regulator McbR;protein_id=WP_001307192.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2429926	2432028	.	-	.	ID=gene-PHA55_RS11890;Name=yncD;gbkey=Gene;gene=yncD;gene_biotype=protein_coding;locus_tag=PHA55_RS11890;old_locus_tag=PHA55_11885
NZ_CP116044.1	Protein Homology	CDS	2429926	2432028	.	-	0	ID=cds-WP_000689355.1;Parent=gene-PHA55_RS11890;Dbxref=Genbank:WP_000689355.1;Name=WP_000689355.1;gbkey=CDS;gene=yncD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415968.1;locus_tag=PHA55_RS11890;product=TonB-dependent receptor;protein_id=WP_000689355.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2432270	2433331	.	+	.	ID=gene-PHA55_RS11895;Name=yncE;gbkey=Gene;gene=yncE;gene_biotype=protein_coding;locus_tag=PHA55_RS11895;old_locus_tag=PHA55_11890
NZ_CP116044.1	Protein Homology	CDS	2432270	2433331	.	+	0	ID=cds-WP_000550675.1;Parent=gene-PHA55_RS11895;Dbxref=Genbank:WP_000550675.1;Name=WP_000550675.1;gbkey=CDS;gene=yncE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310083.1;locus_tag=PHA55_RS11895;product=YncE family protein;protein_id=WP_000550675.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2433446	2434945	.	-	.	ID=gene-PHA55_RS11900;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=PHA55_RS11900;old_locus_tag=PHA55_11895
NZ_CP116044.1	Protein Homology	CDS	2433446	2434945	.	-	0	ID=cds-WP_271287553.1;Parent=gene-PHA55_RS11900;Dbxref=Genbank:WP_271287553.1;Name=WP_271287553.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=ansP;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310084.2;locus_tag=PHA55_RS11900;product=L-asparagine permease;protein_id=WP_271287553.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2435212	2435829	.	+	.	ID=gene-PHA55_RS11905;Name=yncG;gbkey=Gene;gene=yncG;gene_biotype=protein_coding;locus_tag=PHA55_RS11905;old_locus_tag=PHA55_11900
NZ_CP116044.1	Protein Homology	CDS	2435212	2435829	.	+	0	ID=cds-WP_000598869.1;Parent=gene-PHA55_RS11905;Dbxref=Genbank:WP_000598869.1;Name=WP_000598869.1;gbkey=CDS;gene=yncG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415971.1;locus_tag=PHA55_RS11905;product=glutathione S-transferase family protein;protein_id=WP_000598869.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2435905	2436117	.	+	.	ID=gene-PHA55_RS11910;Name=yncH;gbkey=Gene;gene=yncH;gene_biotype=protein_coding;locus_tag=PHA55_RS11910;old_locus_tag=PHA55_11905
NZ_CP116044.1	Protein Homology	CDS	2435905	2436117	.	+	0	ID=cds-WP_000882235.1;Parent=gene-PHA55_RS11910;Dbxref=Genbank:WP_000882235.1;Name=WP_000882235.1;gbkey=CDS;gene=yncH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310086.1;locus_tag=PHA55_RS11910;product=YncH family protein;protein_id=WP_000882235.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2436938	2439046	.	+	.	ID=gene-PHA55_RS11915;Name=PHA55_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11915;old_locus_tag=PHA55_11910
NZ_CP116044.1	Protein Homology	CDS	2436938	2439046	.	+	0	ID=cds-WP_000103411.1;Parent=gene-PHA55_RS11915;Dbxref=Genbank:WP_000103411.1;Name=WP_000103411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310087.1;locus_tag=PHA55_RS11915;product=type VI secretion system tip protein VgrG;protein_id=WP_000103411.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2439113	2443321	.	+	.	ID=gene-PHA55_RS11920;Name=PHA55_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11920;old_locus_tag=PHA55_11915
NZ_CP116044.1	Protein Homology	CDS	2439113	2443321	.	+	0	ID=cds-WP_000014852.1;Parent=gene-PHA55_RS11920;Dbxref=Genbank:WP_000014852.1;Name=WP_000014852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310088.2;locus_tag=PHA55_RS11920;product=RHS element core protein;protein_id=WP_000014852.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2443333	2443728	.	+	.	ID=gene-PHA55_RS11925;Name=PHA55_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11925;old_locus_tag=PHA55_11920
NZ_CP116044.1	Protein Homology	CDS	2443333	2443728	.	+	0	ID=cds-WP_000759875.1;Parent=gene-PHA55_RS11925;Dbxref=Genbank:WP_000759875.1;Name=WP_000759875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000759875.1;locus_tag=PHA55_RS11925;product=RHS element protein dsORF-e4;protein_id=WP_000759875.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	2443750	2443869	.	-	.	ID=gene-PHA55_RS11930;Name=PHA55_RS11930;end_range=2443869,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS11930;old_locus_tag=PHA55_11925;partial=true;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	2443750	2443869	.	-	0	ID=cds-PHA55_RS11930;Parent=gene-PHA55_RS11930;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=2443869,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477181.1;locus_tag=PHA55_RS11930;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	2444236	2445145	.	+	.	ID=gene-PHA55_RS11935;Name=PHA55_RS11935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS11935;old_locus_tag=PHA55_11930;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	2444236	2445145	.	+	0	ID=cds-PHA55_RS11935;Parent=gene-PHA55_RS11935;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=PHA55_RS11935;product=ISAs1 family transposase;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	2445175	2445447	.	+	.	ID=gene-PHA55_RS11940;Name=PHA55_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11940;old_locus_tag=PHA55_11935
NZ_CP116044.1	GeneMarkS-2+	CDS	2445175	2445447	.	+	0	ID=cds-WP_240747077.1;Parent=gene-PHA55_RS11940;Dbxref=Genbank:WP_240747077.1;Name=WP_240747077.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA55_RS11940;product=hypothetical protein;protein_id=WP_240747077.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2445555	2446691	.	+	.	ID=gene-PHA55_RS11945;Name=PHA55_RS11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11945;old_locus_tag=PHA55_11940
NZ_CP116044.1	Protein Homology	CDS	2445555	2446691	.	+	0	ID=cds-WP_033882869.1;Parent=gene-PHA55_RS11945;Dbxref=Genbank:WP_033882869.1;Name=WP_033882869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=PHA55_RS11945;product=ISAs1-like element ISEc1 family transposase;protein_id=WP_033882869.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2447194	2447388	.	+	.	ID=gene-PHA55_RS11950;Name=PHA55_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11950;old_locus_tag=PHA55_11945
NZ_CP116044.1	Protein Homology	CDS	2447194	2447388	.	+	0	ID=cds-WP_000990552.1;Parent=gene-PHA55_RS11950;Dbxref=Genbank:WP_000990552.1;Name=WP_000990552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001351461.1;locus_tag=PHA55_RS11950;product=DUF3969 family protein;protein_id=WP_000990552.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2447469	2451731	.	+	.	ID=gene-PHA55_RS11955;Name=PHA55_RS11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11955;old_locus_tag=PHA55_11950
NZ_CP116044.1	Protein Homology	CDS	2447469	2451731	.	+	0	ID=cds-WP_271287554.1;Parent=gene-PHA55_RS11955;Dbxref=Genbank:WP_271287554.1;Name=WP_271287554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000509087.1;locus_tag=PHA55_RS11955;product=RHS element core protein;protein_id=WP_271287554.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2451743	2452192	.	+	.	ID=gene-PHA55_RS11960;Name=PHA55_RS11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS11960;old_locus_tag=PHA55_11955
NZ_CP116044.1	Protein Homology	CDS	2451743	2452192	.	+	0	ID=cds-WP_000978828.1;Parent=gene-PHA55_RS11960;Dbxref=Genbank:WP_000978828.1;Name=WP_000978828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000978828.1;locus_tag=PHA55_RS11960;product=RHS element protein dsORF-h1;protein_id=WP_000978828.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	2452453	2453223	.	+	.	ID=gene-PHA55_RS11965;Name=PHA55_RS11965;end_range=2453223,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS11965;old_locus_tag=PHA55_11960;partial=true;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	2452453	2453223	.	+	0	ID=cds-PHA55_RS11965;Parent=gene-PHA55_RS11965;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=2453223,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=PHA55_RS11965;partial=true;product=ISAs1 family transposase;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	2453277	2453504	.	+	.	ID=gene-PHA55_RS11970;Name=pptA;gbkey=Gene;gene=pptA;gene_biotype=protein_coding;locus_tag=PHA55_RS11970;old_locus_tag=PHA55_11965
NZ_CP116044.1	Protein Homology	CDS	2453277	2453504	.	+	0	ID=cds-WP_001120141.1;Parent=gene-PHA55_RS11970;Dbxref=Genbank:WP_001120141.1;Name=WP_001120141.1;gbkey=CDS;gene=pptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310091.1;locus_tag=PHA55_RS11970;product=tautomerase PptA;protein_id=WP_001120141.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2453508	2454077	.	-	.	ID=gene-PHA55_RS11975;Name=yddH;gbkey=Gene;gene=yddH;gene_biotype=protein_coding;locus_tag=PHA55_RS11975;old_locus_tag=PHA55_11970
NZ_CP116044.1	Protein Homology	CDS	2453508	2454077	.	-	0	ID=cds-WP_000085912.1;Parent=gene-PHA55_RS11975;Dbxref=Genbank:WP_000085912.1;Name=WP_000085912.1;gbkey=CDS;gene=yddH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415979.2;locus_tag=PHA55_RS11975;product=flavin reductase family protein;protein_id=WP_000085912.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2454250	2455095	.	+	.	ID=gene-PHA55_RS11980;Name=nhoA;gbkey=Gene;gene=nhoA;gene_biotype=protein_coding;locus_tag=PHA55_RS11980;old_locus_tag=PHA55_11975
NZ_CP116044.1	Protein Homology	CDS	2454250	2455095	.	+	0	ID=cds-WP_000187905.1;Parent=gene-PHA55_RS11980;Dbxref=Genbank:WP_000187905.1;Name=WP_000187905.1;Ontology_term=GO:0016407;gbkey=CDS;gene=nhoA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415980.1;locus_tag=PHA55_RS11980;product=N-hydroxyarylamine O-acetyltransferase;protein_id=WP_000187905.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2455191	2456084	.	-	.	ID=gene-PHA55_RS11985;Name=yddE;gbkey=Gene;gene=yddE;gene_biotype=protein_coding;locus_tag=PHA55_RS11985;old_locus_tag=PHA55_11980
NZ_CP116044.1	Protein Homology	CDS	2455191	2456084	.	-	0	ID=cds-WP_000804388.1;Parent=gene-PHA55_RS11985;Dbxref=Genbank:WP_000804388.1;Name=WP_000804388.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;gene=yddE;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415981.1;locus_tag=PHA55_RS11985;product=PhzF family isomerase;protein_id=WP_000804388.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2456163	2456843	.	-	.	ID=gene-PHA55_RS11990;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=PHA55_RS11990;old_locus_tag=PHA55_11985
NZ_CP116044.1	Protein Homology	CDS	2456163	2456843	.	-	0	ID=cds-WP_000617115.1;Parent=gene-PHA55_RS11990;Dbxref=Genbank:WP_000617115.1;Name=WP_000617115.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310095.1;locus_tag=PHA55_RS11990;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000617115.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2456840	2457535	.	-	.	ID=gene-PHA55_RS11995;Name=narW;gbkey=Gene;gene=narW;gene_biotype=protein_coding;locus_tag=PHA55_RS11995;old_locus_tag=PHA55_11990
NZ_CP116044.1	Protein Homology	CDS	2456840	2457535	.	-	0	ID=cds-WP_001166377.1;Parent=gene-PHA55_RS11995;Dbxref=Genbank:WP_001166377.1;Name=WP_001166377.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narW;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415983.1;locus_tag=PHA55_RS11995;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_001166377.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2457535	2459079	.	-	.	ID=gene-PHA55_RS12000;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=PHA55_RS12000;old_locus_tag=PHA55_11995
NZ_CP116044.1	Protein Homology	CDS	2457535	2459079	.	-	0	ID=cds-WP_000702560.1;Parent=gene-PHA55_RS12000;Dbxref=Genbank:WP_000702560.1;Name=WP_000702560.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310097.1;locus_tag=PHA55_RS12000;product=nitrate reductase subunit beta;protein_id=WP_000702560.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2459076	2462816	.	-	.	ID=gene-PHA55_RS12005;Name=narZ;gbkey=Gene;gene=narZ;gene_biotype=protein_coding;locus_tag=PHA55_RS12005;old_locus_tag=PHA55_12000
NZ_CP116044.1	Protein Homology	CDS	2459076	2462816	.	-	0	ID=cds-WP_000040444.1;Parent=gene-PHA55_RS12005;Dbxref=Genbank:WP_000040444.1;Name=WP_000040444.1;gbkey=CDS;gene=narZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415985.1;locus_tag=PHA55_RS12005;product=nitrate reductase Z subunit alpha;protein_id=WP_000040444.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2462898	2464286	.	-	.	ID=gene-PHA55_RS12010;Name=narU;gbkey=Gene;gene=narU;gene_biotype=protein_coding;locus_tag=PHA55_RS12010;old_locus_tag=PHA55_12005
NZ_CP116044.1	Protein Homology	CDS	2462898	2464286	.	-	0	ID=cds-WP_001207905.1;Parent=gene-PHA55_RS12010;Dbxref=Genbank:WP_001207905.1;Name=WP_001207905.1;gbkey=CDS;gene=narU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415986.1;locus_tag=PHA55_RS12010;product=nitrate/nitrite transporter NarU;protein_id=WP_001207905.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	2464610	2465942	.	-	.	ID=gene-PHA55_RS12015;Name=PHA55_RS12015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS12015;old_locus_tag=PHA55_12010;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	2464610	2465942	.	-	0	ID=cds-PHA55_RS12015;Parent=gene-PHA55_RS12015;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627100.1;locus_tag=PHA55_RS12015;product=leucine-rich repeat domain-containing protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	2465981	2466256	.	-	.	ID=gene-PHA55_RS12020;Name=yddL;gbkey=Gene;gene=yddL;gene_biotype=pseudogene;locus_tag=PHA55_RS12020;old_locus_tag=PHA55_12015;partial=true;pseudo=true;start_range=.,2465981
NZ_CP116044.1	Protein Homology	CDS	2465981	2466256	.	-	0	ID=cds-PHA55_RS12020;Parent=gene-PHA55_RS12020;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0034220,GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;gene=yddL;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310103.1;locus_tag=PHA55_RS12020;partial=true;product=porin;pseudo=true;start_range=.,2465981;transl_table=11
NZ_CP116044.1	RefSeq	gene	2466515	2467396	.	-	.	ID=gene-PHA55_RS12025;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=PHA55_RS12025;old_locus_tag=PHA55_12020
NZ_CP116044.1	Protein Homology	CDS	2466515	2467396	.	-	0	ID=cds-WP_000198214.1;Parent=gene-PHA55_RS12025;Dbxref=Genbank:WP_000198214.1;Name=WP_000198214.1;gbkey=CDS;gene=yddG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415990.5;locus_tag=PHA55_RS12025;product=aromatic amino acid efflux DMT transporter YddG;protein_id=WP_000198214.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2467628	2470675	.	+	.	ID=gene-PHA55_RS12030;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=PHA55_RS12030;old_locus_tag=PHA55_12025
NZ_CP116044.1	Protein Homology	CDS	2467628	2470675	.	+	0	ID=cds-WP_012817776.1;Parent=gene-PHA55_RS12030;Dbxref=Genbank:WP_012817776.1;Name=WP_012817776.1;Ontology_term=GO:0015942,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310105.1;locus_tag=PHA55_RS12030;product=formate dehydrogenase-N subunit alpha;protein_id=WP_012817776.1;transl_except=(pos:2468213..2468215%2Caa:Sec);transl_table=11
NZ_CP116044.1	RefSeq	gene	2470688	2471572	.	+	.	ID=gene-PHA55_RS12035;Name=fdnH;gbkey=Gene;gene=fdnH;gene_biotype=protein_coding;locus_tag=PHA55_RS12035;old_locus_tag=PHA55_12030
NZ_CP116044.1	Protein Homology	CDS	2470688	2471572	.	+	0	ID=cds-WP_073568560.1;Parent=gene-PHA55_RS12035;Dbxref=Genbank:WP_073568560.1;Name=WP_073568560.1;gbkey=CDS;gene=fdnH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415992.1;locus_tag=PHA55_RS12035;product=formate dehydrogenase N subunit beta;protein_id=WP_073568560.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2471565	2472218	.	+	.	ID=gene-PHA55_RS12040;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=PHA55_RS12040;old_locus_tag=PHA55_12035
NZ_CP116044.1	Protein Homology	CDS	2471565	2472218	.	+	0	ID=cds-WP_000045648.1;Parent=gene-PHA55_RS12040;Dbxref=Genbank:WP_000045648.1;Name=WP_000045648.1;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310107.1;locus_tag=PHA55_RS12040;product=formate dehydrogenase-N subunit gamma;protein_id=WP_000045648.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2472269	2472553	.	-	.	ID=gene-PHA55_RS12045;Name=yddM;gbkey=Gene;gene=yddM;gene_biotype=protein_coding;locus_tag=PHA55_RS12045;old_locus_tag=PHA55_12040
NZ_CP116044.1	Protein Homology	CDS	2472269	2472553	.	-	0	ID=cds-WP_000781370.1;Parent=gene-PHA55_RS12045;Dbxref=Genbank:WP_000781370.1;Name=WP_000781370.1;Ontology_term=GO:0003677;gbkey=CDS;gene=yddM;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415994.4;locus_tag=PHA55_RS12045;product=HigA family addiction module antitoxin;protein_id=WP_000781370.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2472700	2473710	.	-	.	ID=gene-PHA55_RS12050;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=PHA55_RS12050;old_locus_tag=PHA55_12045
NZ_CP116044.1	Protein Homology	CDS	2472700	2473710	.	-	0	ID=cds-WP_000642407.1;Parent=gene-PHA55_RS12050;Dbxref=Genbank:WP_000642407.1;Name=WP_000642407.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310109.2;locus_tag=PHA55_RS12050;product=alcohol dehydrogenase AdhP;protein_id=WP_000642407.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2473844	2475541	.	-	.	ID=gene-PHA55_RS12055;Name=maeA;gbkey=Gene;gene=maeA;gene_biotype=protein_coding;locus_tag=PHA55_RS12055;old_locus_tag=PHA55_12050
NZ_CP116044.1	Protein Homology	CDS	2473844	2475541	.	-	0	ID=cds-WP_000433464.1;Parent=gene-PHA55_RS12055;Dbxref=Genbank:WP_000433464.1;Name=WP_000433464.1;gbkey=CDS;gene=maeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707611.2;locus_tag=PHA55_RS12055;product=malate dehydrogenase;protein_id=WP_000433464.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2475698	2475835	.	-	.	ID=gene-PHA55_RS12060;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;locus_tag=PHA55_RS12060;old_locus_tag=PHA55_12055
NZ_CP116044.1	Protein Homology	CDS	2475698	2475835	.	-	0	ID=cds-WP_000841554.1;Parent=gene-PHA55_RS12060;Dbxref=Genbank:WP_000841554.1;Name=WP_000841554.1;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310111.1;locus_tag=PHA55_RS12060;product=stationary-phase-induced ribosome-associated protein;protein_id=WP_000841554.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2475937	2476152	.	-	.	ID=gene-PHA55_RS12065;Name=bdm;gbkey=Gene;gene=bdm;gene_biotype=protein_coding;locus_tag=PHA55_RS12065;old_locus_tag=PHA55_12060
NZ_CP116044.1	Protein Homology	CDS	2475937	2476152	.	-	0	ID=cds-WP_000495766.1;Parent=gene-PHA55_RS12065;Dbxref=Genbank:WP_000495766.1;Name=WP_000495766.1;gbkey=CDS;gene=bdm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310112.2;locus_tag=PHA55_RS12065;product=biofilm-dependent modulation protein;protein_id=WP_000495766.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2476497	2476928	.	+	.	ID=gene-PHA55_RS12070;Name=osmC;gbkey=Gene;gene=osmC;gene_biotype=protein_coding;locus_tag=PHA55_RS12070;old_locus_tag=PHA55_12065
NZ_CP116044.1	Protein Homology	CDS	2476497	2476928	.	+	0	ID=cds-WP_000152308.1;Parent=gene-PHA55_RS12070;Dbxref=Genbank:WP_000152308.1;Name=WP_000152308.1;gbkey=CDS;gene=osmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415999.1;locus_tag=PHA55_RS12070;product=peroxiredoxin OsmC;protein_id=WP_000152308.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2476984	2477910	.	-	.	ID=gene-PHA55_RS12075;Name=ddpF;gbkey=Gene;gene=ddpF;gene_biotype=protein_coding;locus_tag=PHA55_RS12075;old_locus_tag=PHA55_12070
NZ_CP116044.1	Protein Homology	CDS	2476984	2477910	.	-	0	ID=cds-WP_001285527.1;Parent=gene-PHA55_RS12075;Dbxref=Genbank:WP_001285527.1;Name=WP_001285527.1;gbkey=CDS;gene=ddpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416000.1;locus_tag=PHA55_RS12075;product=ABC transporter ATP-binding protein;protein_id=WP_001285527.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2477903	2478889	.	-	.	ID=gene-PHA55_RS12080;Name=ddpD;gbkey=Gene;gene=ddpD;gene_biotype=protein_coding;locus_tag=PHA55_RS12080;old_locus_tag=PHA55_12075
NZ_CP116044.1	Protein Homology	CDS	2477903	2478889	.	-	0	ID=cds-WP_000193576.1;Parent=gene-PHA55_RS12080;Dbxref=Genbank:WP_000193576.1;Name=WP_000193576.1;gbkey=CDS;gene=ddpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310115.1;locus_tag=PHA55_RS12080;product=ABC transporter ATP-binding protein;protein_id=WP_000193576.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2478886	2479782	.	-	.	ID=gene-PHA55_RS12085;Name=ddpC;gbkey=Gene;gene=ddpC;gene_biotype=protein_coding;locus_tag=PHA55_RS12085;old_locus_tag=PHA55_12080
NZ_CP116044.1	Protein Homology	CDS	2478886	2479782	.	-	0	ID=cds-WP_000979608.1;Parent=gene-PHA55_RS12085;Dbxref=Genbank:WP_000979608.1;Name=WP_000979608.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=ddpC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310116.1;locus_tag=PHA55_RS12085;product=D%2CD-dipeptide ABC transporter permease;protein_id=WP_000979608.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2479779	2480801	.	-	.	ID=gene-PHA55_RS12090;Name=ddpB;gbkey=Gene;gene=ddpB;gene_biotype=protein_coding;locus_tag=PHA55_RS12090;old_locus_tag=PHA55_12085
NZ_CP116044.1	Protein Homology	CDS	2479779	2480801	.	-	0	ID=cds-WP_000145111.1;Parent=gene-PHA55_RS12090;Dbxref=Genbank:WP_000145111.1;Name=WP_000145111.1;gbkey=CDS;gene=ddpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416003.1;locus_tag=PHA55_RS12090;product=ABC transporter permease;protein_id=WP_000145111.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	2480803	2482352	.	-	.	ID=gene-PHA55_RS12095;Name=ddpA;gbkey=Gene;gene=ddpA;gene_biotype=pseudogene;locus_tag=PHA55_RS12095;old_locus_tag=PHA55_12090;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	2480803	2482352	.	-	0	ID=cds-PHA55_RS12095;Parent=gene-PHA55_RS12095;Note=frameshifted;gbkey=CDS;gene=ddpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416004.1;locus_tag=PHA55_RS12095;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	2482366	2482947	.	-	.	ID=gene-PHA55_RS12100;Name=ddpX;gbkey=Gene;gene=ddpX;gene_biotype=protein_coding;locus_tag=PHA55_RS12100;old_locus_tag=PHA55_12095
NZ_CP116044.1	Protein Homology	CDS	2482366	2482947	.	-	0	ID=cds-WP_001285833.1;Parent=gene-PHA55_RS12100;Dbxref=Genbank:WP_001285833.1;Name=WP_001285833.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;gene=ddpX;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416005.1;locus_tag=PHA55_RS12100;product=D-alanyl-D-alanine dipeptidase;protein_id=WP_001285833.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2483205	2485604	.	-	.	ID=gene-PHA55_RS12105;Name=dosP;gbkey=Gene;gene=dosP;gene_biotype=protein_coding;gene_synonym=pdeO;locus_tag=PHA55_RS12105;old_locus_tag=PHA55_12100
NZ_CP116044.1	Protein Homology	CDS	2483205	2485604	.	-	0	ID=cds-WP_001307211.1;Parent=gene-PHA55_RS12105;Dbxref=Genbank:WP_001307211.1;Name=WP_001307211.1;gbkey=CDS;gene=dosP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416006.4;locus_tag=PHA55_RS12105;product=oxygen-sensing cyclic-di-GMP phosphodiesterase;protein_id=WP_001307211.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2485629	2487011	.	-	.	ID=gene-PHA55_RS12110;Name=dosC;gbkey=Gene;gene=dosC;gene_biotype=protein_coding;locus_tag=PHA55_RS12110;old_locus_tag=PHA55_12105
NZ_CP116044.1	Protein Homology	CDS	2485629	2487011	.	-	0	ID=cds-WP_000426265.1;Parent=gene-PHA55_RS12110;Dbxref=Genbank:WP_000426265.1;Name=WP_000426265.1;gbkey=CDS;gene=dosC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310122.1;locus_tag=PHA55_RS12110;product=diguanylate cyclase DosC;protein_id=WP_000426265.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2487023	2487085	.	-	.	ID=gene-PHA55_RS12115;Name=PHA55_RS12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12115;old_locus_tag=PHA55_12110
NZ_CP116044.1	Protein Homology	CDS	2487023	2487085	.	-	0	ID=cds-WP_223346011.1;Parent=gene-PHA55_RS12115;Dbxref=Genbank:WP_223346011.1;Name=WP_223346011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518783.1;locus_tag=PHA55_RS12115;product=hypothetical protein;protein_id=WP_223346011.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2487383	2488702	.	-	.	ID=gene-PHA55_RS12120;Name=digH;gbkey=Gene;gene=digH;gene_biotype=protein_coding;locus_tag=PHA55_RS12120;old_locus_tag=PHA55_12115
NZ_CP116044.1	Protein Homology	CDS	2487383	2488702	.	-	0	ID=cds-WP_000350390.1;Parent=gene-PHA55_RS12120;Dbxref=Genbank:WP_000350390.1;Name=WP_000350390.1;gbkey=CDS;gene=digH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310123.1;locus_tag=PHA55_RS12120;product=glycoside hydrolase family 10 protein;protein_id=WP_000350390.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2488833	2490368	.	-	.	ID=gene-PHA55_RS12125;Name=gadC;gbkey=Gene;gene=gadC;gene_biotype=protein_coding;locus_tag=PHA55_RS12125;old_locus_tag=PHA55_12120
NZ_CP116044.1	Protein Homology	CDS	2488833	2490368	.	-	0	ID=cds-WP_000246019.1;Parent=gene-PHA55_RS12125;Dbxref=Genbank:WP_000246019.1;Name=WP_000246019.1;gbkey=CDS;gene=gadC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416009.1;locus_tag=PHA55_RS12125;product=acid resistance gamma-aminobutyrate antiporter GadC;protein_id=WP_000246019.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2490524	2491924	.	-	.	ID=gene-PHA55_RS12130;Name=gadB;gbkey=Gene;gene=gadB;gene_biotype=protein_coding;locus_tag=PHA55_RS12130;old_locus_tag=PHA55_12125
NZ_CP116044.1	Protein Homology	CDS	2490524	2491924	.	-	0	ID=cds-WP_000358930.1;Parent=gene-PHA55_RS12130;Dbxref=Genbank:WP_000358930.1;Name=WP_000358930.1;Ontology_term=GO:0006540,GO:0004351;gbkey=CDS;gene=gadB;go_function=glutamate decarboxylase activity|0004351||IEA;go_process=glutamate decarboxylation to succinate|0006540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310125.1;locus_tag=PHA55_RS12130;product=glutamate decarboxylase;protein_id=WP_000358930.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2492286	2495069	.	-	.	ID=gene-PHA55_RS12135;Name=pqqL;gbkey=Gene;gene=pqqL;gene_biotype=protein_coding;locus_tag=PHA55_RS12135;old_locus_tag=PHA55_12130
NZ_CP116044.1	Protein Homology	CDS	2492286	2495069	.	-	0	ID=cds-WP_260589781.1;Parent=gene-PHA55_RS12135;Dbxref=Genbank:WP_260589781.1;Name=WP_260589781.1;gbkey=CDS;gene=pqqL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310126.2;locus_tag=PHA55_RS12135;product=insulinase family protein;protein_id=WP_260589781.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2495126	2497498	.	-	.	ID=gene-PHA55_RS12140;Name=yddB;gbkey=Gene;gene=yddB;gene_biotype=protein_coding;locus_tag=PHA55_RS12140;old_locus_tag=PHA55_12135
NZ_CP116044.1	Protein Homology	CDS	2495126	2497498	.	-	0	ID=cds-WP_271287430.1;Parent=gene-PHA55_RS12140;Dbxref=Genbank:WP_271287430.1;Name=WP_271287430.1;gbkey=CDS;gene=yddB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310127.1;locus_tag=PHA55_RS12140;product=TonB-dependent receptor plug domain-containing protein;protein_id=WP_271287430.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2497536	2499221	.	-	.	ID=gene-PHA55_RS12145;Name=yddA;gbkey=Gene;gene=yddA;gene_biotype=protein_coding;locus_tag=PHA55_RS12145;old_locus_tag=PHA55_12140
NZ_CP116044.1	Protein Homology	CDS	2497536	2499221	.	-	0	ID=cds-WP_001296749.1;Parent=gene-PHA55_RS12145;Dbxref=Genbank:WP_001296749.1;Name=WP_001296749.1;gbkey=CDS;gene=yddA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416013.1;locus_tag=PHA55_RS12145;product=ABC transporter ATP-binding protein/permease;protein_id=WP_001296749.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2499424	2499546	.	+	.	ID=gene-PHA55_RS12150;Name=PHA55_RS12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12150;old_locus_tag=PHA55_12145
NZ_CP116044.1	Protein Homology	CDS	2499424	2499546	.	+	0	ID=cds-WP_120795387.1;Parent=gene-PHA55_RS12150;Dbxref=Genbank:WP_120795387.1;Name=WP_120795387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518784.1;locus_tag=PHA55_RS12150;product=protein YneP;protein_id=WP_120795387.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2499512	2500669	.	-	.	ID=gene-PHA55_RS12155;Name=ydeM;gbkey=Gene;gene=ydeM;gene_biotype=protein_coding;locus_tag=PHA55_RS12155;old_locus_tag=PHA55_12150
NZ_CP116044.1	Protein Homology	CDS	2499512	2500669	.	-	0	ID=cds-WP_001295683.1;Parent=gene-PHA55_RS12155;Dbxref=Genbank:WP_001295683.1;Name=WP_001295683.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;gene=ydeM;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416014.4;locus_tag=PHA55_RS12155;product=anaerobic sulfatase maturase;protein_id=WP_001295683.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2500721	2502403	.	-	.	ID=gene-PHA55_RS12160;Name=ydeN;gbkey=Gene;gene=ydeN;gene_biotype=protein_coding;locus_tag=PHA55_RS12160;old_locus_tag=PHA55_12155
NZ_CP116044.1	Protein Homology	CDS	2500721	2502403	.	-	0	ID=cds-WP_001295684.1;Parent=gene-PHA55_RS12160;Dbxref=Genbank:WP_001295684.1;Name=WP_001295684.1;gbkey=CDS;gene=ydeN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416015.2;locus_tag=PHA55_RS12160;product=sulfatase;protein_id=WP_001295684.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2502805	2503566	.	-	.	ID=gene-PHA55_RS12165;Name=ydeO;gbkey=Gene;gene=ydeO;gene_biotype=protein_coding;locus_tag=PHA55_RS12165;old_locus_tag=PHA55_12160
NZ_CP116044.1	Protein Homology	CDS	2502805	2503566	.	-	0	ID=cds-WP_000060493.1;Parent=gene-PHA55_RS12165;Dbxref=Genbank:WP_000060493.1;Name=WP_000060493.1;gbkey=CDS;gene=ydeO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416016.1;locus_tag=PHA55_RS12165;product=acid stress response transcriptional regulator YdeO;protein_id=WP_000060493.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2503641	2503838	.	-	.	ID=gene-PHA55_RS12170;Name=safA;gbkey=Gene;gene=safA;gene_biotype=protein_coding;locus_tag=PHA55_RS12170;old_locus_tag=PHA55_12165
NZ_CP116044.1	Protein Homology	CDS	2503641	2503838	.	-	0	ID=cds-WP_047082570.1;Parent=gene-PHA55_RS12170;Dbxref=Genbank:WP_047082570.1;Name=WP_047082570.1;gbkey=CDS;gene=safA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310132.1;locus_tag=PHA55_RS12170;product=two-component system connector SafA;protein_id=WP_047082570.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2504086	2506365	.	-	.	ID=gene-PHA55_RS12175;Name=ydeP;gbkey=Gene;gene=ydeP;gene_biotype=protein_coding;locus_tag=PHA55_RS12175;old_locus_tag=PHA55_12170
NZ_CP116044.1	Protein Homology	CDS	2504086	2506365	.	-	0	ID=cds-WP_000726696.1;Parent=gene-PHA55_RS12175;Dbxref=Genbank:WP_000726696.1;Name=WP_000726696.1;gbkey=CDS;gene=ydeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416018.1;locus_tag=PHA55_RS12175;product=acid resistance putative oxidoreductase YdeP;protein_id=WP_000726696.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2506699	2507613	.	-	.	ID=gene-PHA55_RS12180;Name=ydeQ;gbkey=Gene;gene=ydeQ;gene_biotype=protein_coding;locus_tag=PHA55_RS12180;old_locus_tag=PHA55_12175
NZ_CP116044.1	Protein Homology	CDS	2506699	2507613	.	-	0	ID=cds-WP_000520671.1;Parent=gene-PHA55_RS12180;Dbxref=Genbank:WP_000520671.1;Name=WP_000520671.1;gbkey=CDS;gene=ydeQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416019.1;locus_tag=PHA55_RS12180;product=fimbrial protein;protein_id=WP_000520671.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2507672	2508175	.	-	.	ID=gene-PHA55_RS12185;Name=ydeR;gbkey=Gene;gene=ydeR;gene_biotype=protein_coding;locus_tag=PHA55_RS12185;old_locus_tag=PHA55_12180
NZ_CP116044.1	Protein Homology	CDS	2507672	2508175	.	-	0	ID=cds-WP_000825458.1;Parent=gene-PHA55_RS12185;Dbxref=Genbank:WP_000825458.1;Name=WP_000825458.1;gbkey=CDS;gene=ydeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416020.1;locus_tag=PHA55_RS12185;product=fimbrial protein;protein_id=WP_000825458.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2508188	2508718	.	-	.	ID=gene-PHA55_RS12190;Name=ydeS;gbkey=Gene;gene=ydeS;gene_biotype=protein_coding;locus_tag=PHA55_RS12190;old_locus_tag=PHA55_12185
NZ_CP116044.1	Protein Homology	CDS	2508188	2508718	.	-	0	ID=cds-WP_000876763.1;Parent=gene-PHA55_RS12190;Dbxref=Genbank:WP_000876763.1;Name=WP_000876763.1;gbkey=CDS;gene=ydeS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416021.1;locus_tag=PHA55_RS12190;product=fimbrial protein;protein_id=WP_000876763.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2508732	2511383	.	-	.	ID=gene-PHA55_RS12195;Name=PHA55_RS12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12195;old_locus_tag=PHA55_12190
NZ_CP116044.1	Protein Homology	CDS	2508732	2511383	.	-	0	ID=cds-WP_271287431.1;Parent=gene-PHA55_RS12195;Dbxref=Genbank:WP_271287431.1;Name=WP_271287431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310137.2;locus_tag=PHA55_RS12195;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_271287431.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2511425	2512135	.	-	.	ID=gene-PHA55_RS12200;Name=PHA55_RS12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12200;old_locus_tag=PHA55_12195
NZ_CP116044.1	Protein Homology	CDS	2511425	2512135	.	-	0	ID=cds-WP_001195166.1;Parent=gene-PHA55_RS12200;Dbxref=Genbank:WP_001195166.1;Name=WP_001195166.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310139.1;locus_tag=PHA55_RS12200;product=fimbria/pilus periplasmic chaperone;protein_id=WP_001195166.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2512496	2513059	.	-	.	ID=gene-PHA55_RS12205;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=PHA55_RS12205;old_locus_tag=PHA55_12200
NZ_CP116044.1	Protein Homology	CDS	2512496	2513059	.	-	0	ID=cds-WP_001296758.1;Parent=gene-PHA55_RS12205;Dbxref=Genbank:WP_001296758.1;Name=WP_001296758.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=fimA;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310140.1;locus_tag=PHA55_RS12205;product=type 1 fimbrial major subunit FimA;protein_id=WP_001296758.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	2513491	2513699	.	-	.	ID=gene-PHA55_RS12210;Name=PHA55_RS12210;end_range=2513699,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS12210;old_locus_tag=PHA55_12205;partial=true;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	2513491	2513699	.	-	0	ID=cds-PHA55_RS12210;Parent=gene-PHA55_RS12210;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2513699,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226947.1;locus_tag=PHA55_RS12210;partial=true;product=AraC family transcriptional regulator;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	2514011	2515333	.	-	.	ID=gene-PHA55_RS12215;Name=hipA;gbkey=Gene;gene=hipA;gene_biotype=protein_coding;locus_tag=PHA55_RS12215;old_locus_tag=PHA55_12210
NZ_CP116044.1	Protein Homology	CDS	2514011	2515333	.	-	0	ID=cds-WP_001125463.1;Parent=gene-PHA55_RS12215;Dbxref=Genbank:WP_001125463.1;Name=WP_001125463.1;gbkey=CDS;gene=hipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416024.1;locus_tag=PHA55_RS12215;product=type II toxin-antitoxin system serine/threonine protein kinase toxin HipA;protein_id=WP_001125463.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2515333	2515599	.	-	.	ID=gene-PHA55_RS12220;Name=hipB;gbkey=Gene;gene=hipB;gene_biotype=protein_coding;locus_tag=PHA55_RS12220;old_locus_tag=PHA55_12215
NZ_CP116044.1	Protein Homology	CDS	2515333	2515599	.	-	0	ID=cds-WP_001296726.1;Parent=gene-PHA55_RS12220;Dbxref=Genbank:WP_001296726.1;Name=WP_001296726.1;gbkey=CDS;gene=hipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416025.1;locus_tag=PHA55_RS12220;product=type II toxin-antitoxin system antitoxin HipB;protein_id=WP_001296726.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2515808	2521228	.	-	.	ID=gene-PHA55_RS12225;Name=PHA55_RS12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12225;old_locus_tag=PHA55_12220
NZ_CP116044.1	Protein Homology	CDS	2515808	2521228	.	-	0	ID=cds-WP_260589782.1;Parent=gene-PHA55_RS12225;Dbxref=Genbank:WP_260589782.1;Name=WP_260589782.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244610.1;locus_tag=PHA55_RS12225;product=ECSE_1600 family autotransporter;protein_id=WP_260589782.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2521759	2523351	.	-	.	ID=gene-PHA55_RS12230;Name=lsrK;gbkey=Gene;gene=lsrK;gene_biotype=protein_coding;locus_tag=PHA55_RS12230;old_locus_tag=PHA55_12225
NZ_CP116044.1	Protein Homology	CDS	2521759	2523351	.	-	0	ID=cds-WP_000113127.1;Parent=gene-PHA55_RS12230;Dbxref=Genbank:WP_000113127.1;Name=WP_000113127.1;Ontology_term=GO:0005975,GO:0009372,GO:0071518;gbkey=CDS;gene=lsrK;go_function=autoinducer-2 kinase activity|0071518||IEA;go_process=carbohydrate metabolic process|0005975||IEA,quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416028.3;locus_tag=PHA55_RS12230;product=autoinducer-2 kinase;protein_id=WP_000113127.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2523430	2524383	.	-	.	ID=gene-PHA55_RS12235;Name=lsrR;gbkey=Gene;gene=lsrR;gene_biotype=protein_coding;locus_tag=PHA55_RS12235;old_locus_tag=PHA55_12230
NZ_CP116044.1	Protein Homology	CDS	2523430	2524383	.	-	0	ID=cds-WP_000154340.1;Parent=gene-PHA55_RS12235;Dbxref=Genbank:WP_000154340.1;Name=WP_000154340.1;gbkey=CDS;gene=lsrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707462.1;locus_tag=PHA55_RS12235;product=transcriptional regulator LsrR;protein_id=WP_000154340.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2524632	2526167	.	+	.	ID=gene-PHA55_RS12240;Name=lsrA;gbkey=Gene;gene=lsrA;gene_biotype=protein_coding;locus_tag=PHA55_RS12240;old_locus_tag=PHA55_12235
NZ_CP116044.1	Protein Homology	CDS	2524632	2526167	.	+	0	ID=cds-WP_001194889.1;Parent=gene-PHA55_RS12240;Dbxref=Genbank:WP_001194889.1;Name=WP_001194889.1;Ontology_term=GO:1905887,GO:0005524,GO:0042626,GO:0016020;gbkey=CDS;gene=lsrA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416030.1;locus_tag=PHA55_RS12240;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;protein_id=WP_001194889.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2526161	2527189	.	+	.	ID=gene-PHA55_RS12245;Name=lsrC;gbkey=Gene;gene=lsrC;gene_biotype=protein_coding;locus_tag=PHA55_RS12245;old_locus_tag=PHA55_12240
NZ_CP116044.1	Protein Homology	CDS	2526161	2527189	.	+	0	ID=cds-WP_000911143.1;Parent=gene-PHA55_RS12245;Dbxref=Genbank:WP_000911143.1;Name=WP_000911143.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lsrC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416031.1;locus_tag=PHA55_RS12245;product=autoinducer 2 ABC transporter permease LsrC;protein_id=WP_000911143.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2527189	2528181	.	+	.	ID=gene-PHA55_RS12250;Name=lsrD;gbkey=Gene;gene=lsrD;gene_biotype=protein_coding;locus_tag=PHA55_RS12250;old_locus_tag=PHA55_12245
NZ_CP116044.1	Protein Homology	CDS	2527189	2528181	.	+	0	ID=cds-WP_001222721.1;Parent=gene-PHA55_RS12250;Dbxref=Genbank:WP_001222721.1;Name=WP_001222721.1;gbkey=CDS;gene=lsrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416032.1;locus_tag=PHA55_RS12250;product=autoinducer 2 ABC transporter permease LsrD;protein_id=WP_001222721.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2528193	2529215	.	+	.	ID=gene-PHA55_RS12255;Name=lsrB;gbkey=Gene;gene=lsrB;gene_biotype=protein_coding;locus_tag=PHA55_RS12255;old_locus_tag=PHA55_12250
NZ_CP116044.1	Protein Homology	CDS	2528193	2529215	.	+	0	ID=cds-WP_000172479.1;Parent=gene-PHA55_RS12255;Dbxref=Genbank:WP_000172479.1;Name=WP_000172479.1;gbkey=CDS;gene=lsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310150.1;locus_tag=PHA55_RS12255;product=autoinducer 2 ABC transporter substrate-binding protein LsrB;protein_id=WP_000172479.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2529242	2530117	.	+	.	ID=gene-PHA55_RS12260;Name=lsrF;gbkey=Gene;gene=lsrF;gene_biotype=protein_coding;locus_tag=PHA55_RS12260;old_locus_tag=PHA55_12255
NZ_CP116044.1	Protein Homology	CDS	2529242	2530117	.	+	0	ID=cds-WP_000774189.1;Parent=gene-PHA55_RS12260;Dbxref=Genbank:WP_000774189.1;Name=WP_000774189.1;Ontology_term=GO:0016829;gbkey=CDS;gene=lsrF;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310151.1;locus_tag=PHA55_RS12260;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase;protein_id=WP_000774189.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2530141	2530431	.	+	.	ID=gene-PHA55_RS12265;Name=lsrG;gbkey=Gene;gene=lsrG;gene_biotype=protein_coding;locus_tag=PHA55_RS12265;old_locus_tag=PHA55_12260
NZ_CP116044.1	Protein Homology	CDS	2530141	2530431	.	+	0	ID=cds-WP_000558520.1;Parent=gene-PHA55_RS12265;Dbxref=Genbank:WP_000558520.1;Name=WP_000558520.1;gbkey=CDS;gene=lsrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310152.1;locus_tag=PHA55_RS12265;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=WP_000558520.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	2530488	2531239	.	+	.	ID=gene-PHA55_RS12270;Name=tam;gbkey=Gene;gene=tam;gene_biotype=pseudogene;locus_tag=PHA55_RS12270;old_locus_tag=PHA55_12265;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	2530488	2531239	.	+	0	ID=cds-PHA55_RS12270;Parent=gene-PHA55_RS12270;Note=frameshifted;Ontology_term=GO:0030798;gbkey=CDS;gene=tam;go_function=trans-aconitate 2-methyltransferase activity|0030798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416036.1;locus_tag=PHA55_RS12270;product=trans-aconitate 2-methyltransferase;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	2531243	2532157	.	-	.	ID=gene-PHA55_RS12275;Name=yneE;gbkey=Gene;gene=yneE;gene_biotype=protein_coding;locus_tag=PHA55_RS12275;old_locus_tag=PHA55_12270
NZ_CP116044.1	Protein Homology	CDS	2531243	2532157	.	-	0	ID=cds-WP_001313828.1;Parent=gene-PHA55_RS12275;Dbxref=Genbank:WP_001313828.1;Name=WP_001313828.1;gbkey=CDS;gene=yneE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416037.2;locus_tag=PHA55_RS12275;product=bestrophin family protein;protein_id=WP_001313828.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2532354	2533805	.	-	.	ID=gene-PHA55_RS12280;Name=uxaB;gbkey=Gene;gene=uxaB;gene_biotype=protein_coding;locus_tag=PHA55_RS12280;old_locus_tag=PHA55_12275
NZ_CP116044.1	Protein Homology	CDS	2532354	2533805	.	-	0	ID=cds-WP_260589783.1;Parent=gene-PHA55_RS12280;Dbxref=Genbank:WP_260589783.1;Name=WP_260589783.1;gbkey=CDS;gene=uxaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310155.1;locus_tag=PHA55_RS12280;product=tagaturonate reductase;protein_id=WP_260589783.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2534032	2535450	.	-	.	ID=gene-PHA55_RS12285;Name=PHA55_RS12285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12285;old_locus_tag=PHA55_12280
NZ_CP116044.1	Protein Homology	CDS	2534032	2535450	.	-	0	ID=cds-WP_260589784.1;Parent=gene-PHA55_RS12285;Dbxref=Genbank:WP_260589784.1;Name=WP_260589784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310156.2;locus_tag=PHA55_RS12285;product=diguanylate cyclase;protein_id=WP_260589784.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2535589	2535948	.	-	.	ID=gene-PHA55_RS12290;Name=yneG;gbkey=Gene;gene=yneG;gene_biotype=protein_coding;locus_tag=PHA55_RS12290;old_locus_tag=PHA55_12285
NZ_CP116044.1	Protein Homology	CDS	2535589	2535948	.	-	0	ID=cds-WP_001191027.1;Parent=gene-PHA55_RS12290;Dbxref=Genbank:WP_001191027.1;Name=WP_001191027.1;gbkey=CDS;gene=yneG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416040.1;locus_tag=PHA55_RS12290;product=DUF4186 domain-containing protein;protein_id=WP_001191027.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2535948	2536874	.	-	.	ID=gene-PHA55_RS12295;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=PHA55_RS12295;old_locus_tag=PHA55_12290
NZ_CP116044.1	Protein Homology	CDS	2535948	2536874	.	-	0	ID=cds-WP_000257409.1;Parent=gene-PHA55_RS12295;Dbxref=Genbank:WP_000257409.1;Name=WP_000257409.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310158.1;locus_tag=PHA55_RS12295;product=glutaminase B;protein_id=WP_000257409.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2536938	2538326	.	-	.	ID=gene-PHA55_RS12300;Name=sad;gbkey=Gene;gene=sad;gene_biotype=protein_coding;locus_tag=PHA55_RS12300;old_locus_tag=PHA55_12295
NZ_CP116044.1	Protein Homology	CDS	2536938	2538326	.	-	0	ID=cds-WP_001296740.1;Parent=gene-PHA55_RS12300;Dbxref=Genbank:WP_001296740.1;Name=WP_001296740.1;Ontology_term=GO:0004030;gbkey=CDS;gene=sad;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416042.2;locus_tag=PHA55_RS12300;product=succinate-semialdehyde dehydrogenase;protein_id=WP_001296740.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2538427	2539308	.	+	.	ID=gene-PHA55_RS12305;Name=yneJ;gbkey=Gene;gene=yneJ;gene_biotype=protein_coding;locus_tag=PHA55_RS12305;old_locus_tag=PHA55_12300
NZ_CP116044.1	Protein Homology	CDS	2538427	2539308	.	+	0	ID=cds-WP_000366497.1;Parent=gene-PHA55_RS12305;Dbxref=Genbank:WP_000366497.1;Name=WP_000366497.1;gbkey=CDS;gene=yneJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310160.1;locus_tag=PHA55_RS12305;product=LysR family transcriptional regulator;protein_id=WP_000366497.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	2539385	2540499	.	+	.	ID=gene-PHA55_RS12310;Name=yneK;gbkey=Gene;gene=yneK;gene_biotype=pseudogene;locus_tag=PHA55_RS12310;old_locus_tag=PHA55_12305;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	2539385	2540499	.	+	0	ID=cds-PHA55_RS12310;Parent=gene-PHA55_RS12310;Note=frameshifted;gbkey=CDS;gene=yneK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416044.1;locus_tag=PHA55_RS12310;product=putative protein YneK;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	2540649	2541839	.	+	.	ID=gene-PHA55_RS12315;Name=ydeA;gbkey=Gene;gene=ydeA;gene_biotype=protein_coding;locus_tag=PHA55_RS12315;old_locus_tag=PHA55_12310
NZ_CP116044.1	Protein Homology	CDS	2540649	2541839	.	+	0	ID=cds-WP_000210808.1;Parent=gene-PHA55_RS12315;Dbxref=Genbank:WP_000210808.1;Name=WP_000210808.1;gbkey=CDS;gene=ydeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416045.1;locus_tag=PHA55_RS12315;product=L-arabinose MFS transporter;protein_id=WP_000210808.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2541864	2542529	.	-	.	ID=gene-PHA55_RS12320;Name=marC;gbkey=Gene;gene=marC;gene_biotype=protein_coding;locus_tag=PHA55_RS12320;old_locus_tag=PHA55_12315
NZ_CP116044.1	Protein Homology	CDS	2541864	2542529	.	-	0	ID=cds-WP_000885033.1;Parent=gene-PHA55_RS12320;Dbxref=Genbank:WP_000885033.1;Name=WP_000885033.1;gbkey=CDS;gene=marC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416046.1;locus_tag=PHA55_RS12320;product=NAAT family transporter MarC;protein_id=WP_000885033.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2542741	2543175	.	+	.	ID=gene-PHA55_RS12325;Name=marR;gbkey=Gene;gene=marR;gene_biotype=protein_coding;locus_tag=PHA55_RS12325;old_locus_tag=PHA55_12320
NZ_CP116044.1	Protein Homology	CDS	2542741	2543175	.	+	0	ID=cds-WP_000843419.1;Parent=gene-PHA55_RS12325;Dbxref=Genbank:WP_000843419.1;Name=WP_000843419.1;gbkey=CDS;gene=marR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310164.2;locus_tag=PHA55_RS12325;product=multiple antibiotic resistance transcriptional regulator MarR;protein_id=WP_000843419.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2543195	2543578	.	+	.	ID=gene-PHA55_RS12330;Name=marA;gbkey=Gene;gene=marA;gene_biotype=protein_coding;locus_tag=PHA55_RS12330;old_locus_tag=PHA55_12325
NZ_CP116044.1	Protein Homology	CDS	2543195	2543578	.	+	0	ID=cds-WP_000091199.1;Parent=gene-PHA55_RS12330;Dbxref=Genbank:WP_000091199.1;Name=WP_000091199.1;gbkey=CDS;gene=marA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707445.2;locus_tag=PHA55_RS12330;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=WP_000091199.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2543610	2543828	.	+	.	ID=gene-PHA55_RS12335;Name=marB;gbkey=Gene;gene=marB;gene_biotype=protein_coding;locus_tag=PHA55_RS12335;old_locus_tag=PHA55_12330
NZ_CP116044.1	Protein Homology	CDS	2543610	2543828	.	+	0	ID=cds-WP_000803659.1;Parent=gene-PHA55_RS12335;Dbxref=Genbank:WP_000803659.1;Name=WP_000803659.1;gbkey=CDS;gene=marB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416049.1;locus_tag=PHA55_RS12335;product=multiple antibiotic resistance protein MarB;protein_id=WP_000803659.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2543885	2545324	.	-	.	ID=gene-PHA55_RS12340;Name=PHA55_RS12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12340;old_locus_tag=PHA55_12335
NZ_CP116044.1	Protein Homology	CDS	2543885	2545324	.	-	0	ID=cds-WP_021556827.1;Parent=gene-PHA55_RS12340;Dbxref=Genbank:WP_021556827.1;Name=WP_021556827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000012594.1;locus_tag=PHA55_RS12340;product=6-phospho-beta-glucosidase;protein_id=WP_021556827.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2545349	2547022	.	-	.	ID=gene-PHA55_RS12345;Name=PHA55_RS12345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12345;old_locus_tag=PHA55_12340
NZ_CP116044.1	Protein Homology	CDS	2545349	2547022	.	-	0	ID=cds-WP_021556828.1;Parent=gene-PHA55_RS12345;Dbxref=Genbank:WP_021556828.1;Name=WP_021556828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233185.1;locus_tag=PHA55_RS12345;product=carbohydrate porin;protein_id=WP_021556828.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2547078	2547389	.	-	.	ID=gene-PHA55_RS12350;Name=PHA55_RS12350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12350;old_locus_tag=PHA55_12345
NZ_CP116044.1	Protein Homology	CDS	2547078	2547389	.	-	0	ID=cds-WP_001459752.1;Parent=gene-PHA55_RS12350;Dbxref=Genbank:WP_001459752.1;Name=WP_001459752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001314746.1;locus_tag=PHA55_RS12350;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=WP_001459752.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2547417	2548739	.	-	.	ID=gene-PHA55_RS12355;Name=PHA55_RS12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12355;old_locus_tag=PHA55_12350
NZ_CP116044.1	Protein Homology	CDS	2547417	2548739	.	-	0	ID=cds-WP_001347941.1;Parent=gene-PHA55_RS12355;Dbxref=Genbank:WP_001347941.1;Name=WP_001347941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001736301.1;locus_tag=PHA55_RS12355;product=PTS sugar transporter subunit IIC;protein_id=WP_001347941.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2548854	2549165	.	-	.	ID=gene-PHA55_RS12360;Name=PHA55_RS12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12360;old_locus_tag=PHA55_12355
NZ_CP116044.1	Protein Homology	CDS	2548854	2549165	.	-	0	ID=cds-WP_000722571.1;Parent=gene-PHA55_RS12360;Dbxref=Genbank:WP_000722571.1;Name=WP_000722571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000722572.1;locus_tag=PHA55_RS12360;product=PTS sugar transporter subunit IIB;protein_id=WP_000722571.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2549364	2550062	.	+	.	ID=gene-PHA55_RS12365;Name=PHA55_RS12365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12365;old_locus_tag=PHA55_12360
NZ_CP116044.1	Protein Homology	CDS	2549364	2550062	.	+	0	ID=cds-WP_000577184.1;Parent=gene-PHA55_RS12365;Dbxref=Genbank:WP_000577184.1;Name=WP_000577184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000577178.1;locus_tag=PHA55_RS12365;product=GntR family transcriptional regulator;protein_id=WP_000577184.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2550107	2551006	.	-	.	ID=gene-PHA55_RS12370;Name=eamA;gbkey=Gene;gene=eamA;gene_biotype=protein_coding;locus_tag=PHA55_RS12370;old_locus_tag=PHA55_12365
NZ_CP116044.1	Protein Homology	CDS	2550107	2551006	.	-	0	ID=cds-WP_000087216.1;Parent=gene-PHA55_RS12370;Dbxref=Genbank:WP_000087216.1;Name=WP_000087216.1;Ontology_term=GO:0016020;gbkey=CDS;gene=eamA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310167.1;locus_tag=PHA55_RS12370;product=O-acetylserine/cysteine exporter;protein_id=WP_000087216.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2551201	2552388	.	+	.	ID=gene-PHA55_RS12375;Name=ydeE;gbkey=Gene;gene=ydeE;gene_biotype=protein_coding;locus_tag=PHA55_RS12375;old_locus_tag=PHA55_12370
NZ_CP116044.1	Protein Homology	CDS	2551201	2552388	.	+	0	ID=cds-WP_001054189.1;Parent=gene-PHA55_RS12375;Dbxref=Genbank:WP_001054189.1;Name=WP_001054189.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydeE;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416051.1;locus_tag=PHA55_RS12375;product=efflux MFS transporter YdeE;protein_id=WP_001054189.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2552515	2552610	.	+	.	ID=gene-PHA55_RS12380;Name=mgtS;gbkey=Gene;gene=mgtS;gene_biotype=protein_coding;locus_tag=PHA55_RS12380;old_locus_tag=PHA55_12375
NZ_CP116044.1	Protein Homology	CDS	2552515	2552610	.	+	0	ID=cds-WP_000901367.1;Parent=gene-PHA55_RS12380;Dbxref=Genbank:WP_000901367.1;Name=WP_000901367.1;gbkey=CDS;gene=mgtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165319.1;locus_tag=PHA55_RS12380;product=protein MgtS;protein_id=WP_000901367.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2552610	2552714	.	+	.	ID=gene-PHA55_RS12385;Name=mgtT;gbkey=Gene;gene=mgtT;gene_biotype=protein_coding;locus_tag=PHA55_RS12385;old_locus_tag=PHA55_12380
NZ_CP116044.1	Protein Homology	CDS	2552610	2552714	.	+	0	ID=cds-WP_211180496.1;Parent=gene-PHA55_RS12385;Dbxref=Genbank:WP_211180496.1;Name=WP_211180496.1;gbkey=CDS;gene=mgtT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051185.1;locus_tag=PHA55_RS12385;product=protein MgtT;protein_id=WP_211180496.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2552829	2553719	.	-	.	ID=gene-PHA55_RS12390;Name=dgcZ;gbkey=Gene;gene=dgcZ;gene_biotype=protein_coding;locus_tag=PHA55_RS12390;old_locus_tag=PHA55_12385
NZ_CP116044.1	Protein Homology	CDS	2552829	2553719	.	-	0	ID=cds-WP_000592826.1;Parent=gene-PHA55_RS12390;Dbxref=Genbank:WP_000592826.1;Name=WP_000592826.1;gbkey=CDS;gene=dgcZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416052.1;locus_tag=PHA55_RS12390;product=diguanylate cyclase DgcZ;protein_id=WP_000592826.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2553974	2554366	.	-	.	ID=gene-PHA55_RS12395;Name=ydeI;gbkey=Gene;gene=ydeI;gene_biotype=protein_coding;locus_tag=PHA55_RS12395;old_locus_tag=PHA55_12390
NZ_CP116044.1	Protein Homology	CDS	2553974	2554366	.	-	0	ID=cds-WP_000671730.1;Parent=gene-PHA55_RS12395;Dbxref=Genbank:WP_000671730.1;Name=WP_000671730.1;gbkey=CDS;gene=ydeI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416054.1;locus_tag=PHA55_RS12395;product=YdeI family stress tolerance OB fold protein;protein_id=WP_000671730.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2554642	2555160	.	+	.	ID=gene-PHA55_RS12400;Name=ydeJ;gbkey=Gene;gene=ydeJ;gene_biotype=protein_coding;locus_tag=PHA55_RS12400;old_locus_tag=PHA55_12395
NZ_CP116044.1	Protein Homology	CDS	2554642	2555160	.	+	0	ID=cds-WP_001024561.1;Parent=gene-PHA55_RS12400;Dbxref=Genbank:WP_001024561.1;Name=WP_001024561.1;gbkey=CDS;gene=ydeJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707440.1;locus_tag=PHA55_RS12400;product=2-oxo-tetronate isomerase;protein_id=WP_001024561.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2555205	2557250	.	-	.	ID=gene-PHA55_RS12405;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=PHA55_RS12405;old_locus_tag=PHA55_12400
NZ_CP116044.1	Protein Homology	CDS	2555205	2557250	.	-	0	ID=cds-WP_001296767.1;Parent=gene-PHA55_RS12405;Dbxref=Genbank:WP_001296767.1;Name=WP_001296767.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707439.2;locus_tag=PHA55_RS12405;product=peptidyl-dipeptidase Dcp;protein_id=WP_001296767.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2557387	2558133	.	+	.	ID=gene-PHA55_RS12410;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=PHA55_RS12410;old_locus_tag=PHA55_12405
NZ_CP116044.1	Protein Homology	CDS	2557387	2558133	.	+	0	ID=cds-WP_000636571.1;Parent=gene-PHA55_RS12410;Dbxref=Genbank:WP_000636571.1;Name=WP_000636571.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416057.1;locus_tag=PHA55_RS12410;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WP_000636571.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2558222	2558908	.	+	.	ID=gene-PHA55_RS12415;Name=rspR;gbkey=Gene;gene=rspR;gene_biotype=protein_coding;gene_synonym=ydfH;locus_tag=PHA55_RS12415;old_locus_tag=PHA55_12410
NZ_CP116044.1	Protein Homology	CDS	2558222	2558908	.	+	0	ID=cds-WP_000215549.1;Parent=gene-PHA55_RS12415;Dbxref=Genbank:WP_000215549.1;Name=WP_000215549.1;gbkey=CDS;gene=rspR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310176.1;locus_tag=PHA55_RS12415;product=DNA-binding transcriptional regulator rspR;protein_id=WP_000215549.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2559086	2559289	.	+	.	ID=gene-PHA55_RS12420;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=PHA55_RS12420;old_locus_tag=PHA55_12415
NZ_CP116044.1	Protein Homology	CDS	2559086	2559289	.	+	0	ID=cds-WP_000214712.1;Parent=gene-PHA55_RS12420;Dbxref=Genbank:WP_000214712.1;Name=WP_000214712.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310177.1;locus_tag=PHA55_RS12420;product=putative selenium delivery protein YdfZ;protein_id=WP_000214712.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2559325	2560785	.	-	.	ID=gene-PHA55_RS12425;Name=ydfI;gbkey=Gene;gene=ydfI;gene_biotype=protein_coding;locus_tag=PHA55_RS12425;old_locus_tag=PHA55_12420
NZ_CP116044.1	Protein Homology	CDS	2559325	2560785	.	-	0	ID=cds-WP_000527797.1;Parent=gene-PHA55_RS12425;Dbxref=Genbank:WP_000527797.1;Name=WP_000527797.1;gbkey=CDS;gene=ydfI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707435.1;locus_tag=PHA55_RS12425;product=mannitol dehydrogenase family protein;protein_id=WP_000527797.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	2560874	2562241	.	-	.	ID=gene-PHA55_RS12430;Name=ydfJ;gbkey=Gene;gene=ydfJ;gene_biotype=pseudogene;locus_tag=PHA55_RS12430;old_locus_tag=PHA55_12425;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	2560874	2562241	.	-	0	ID=cds-PHA55_RS12430;Parent=gene-PHA55_RS12430;Note=internal stop;gbkey=CDS;gene=ydfJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000582800.1;locus_tag=PHA55_RS12430;product=MHS family MFS transporter;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	2562762	2562875	.	+	.	ID=gene-PHA55_RS12435;Name=ynfT;gbkey=Gene;gene=ynfT;gene_biotype=protein_coding;locus_tag=PHA55_RS12435;old_locus_tag=PHA55_12430
NZ_CP116044.1	Protein Homology	CDS	2562762	2562875	.	+	0	ID=cds-WP_120795384.1;Parent=gene-PHA55_RS12435;Dbxref=Genbank:WP_120795384.1;Name=WP_120795384.1;gbkey=CDS;gene=ynfT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518779.1;locus_tag=PHA55_RS12435;product=hypothetical protein;protein_id=WP_120795384.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2562944	2563177	.	+	.	ID=gene-PHA55_RS12440;Name=ydfK;gbkey=Gene;gene=ydfK;gene_biotype=protein_coding;locus_tag=PHA55_RS12440;old_locus_tag=PHA55_12435
NZ_CP116044.1	Protein Homology	CDS	2562944	2563177	.	+	0	ID=cds-WP_000836768.1;Parent=gene-PHA55_RS12440;Dbxref=Genbank:WP_000836768.1;Name=WP_000836768.1;gbkey=CDS;gene=ydfK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416062.2;locus_tag=PHA55_RS12440;product=cold shock protein YdfK;protein_id=WP_000836768.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2563494	2564084	.	+	.	ID=gene-PHA55_RS12445;Name=pinQ;gbkey=Gene;gene=pinQ;gene_biotype=protein_coding;locus_tag=PHA55_RS12445;old_locus_tag=PHA55_12440
NZ_CP116044.1	Protein Homology	CDS	2563494	2564084	.	+	0	ID=cds-WP_000078177.1;Parent=gene-PHA55_RS12445;Dbxref=Genbank:WP_000078177.1;Name=WP_000078177.1;gbkey=CDS;gene=pinQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416063.1;locus_tag=PHA55_RS12445;product=recombinase family protein;protein_id=WP_000078177.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2564182	2564757	.	-	.	ID=gene-PHA55_RS12450;Name=tfaQ;gbkey=Gene;gene=tfaQ;gene_biotype=protein_coding;locus_tag=PHA55_RS12450;old_locus_tag=PHA55_12445
NZ_CP116044.1	Protein Homology	CDS	2564182	2564757	.	-	0	ID=cds-WP_000885601.1;Parent=gene-PHA55_RS12450;Dbxref=Genbank:WP_000885601.1;Name=WP_000885601.1;gbkey=CDS;gene=tfaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416064.1;locus_tag=PHA55_RS12450;product=tail fiber assembly protein;protein_id=WP_000885601.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2564757	2568155	.	-	.	ID=gene-PHA55_RS12455;Name=PHA55_RS12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12455;old_locus_tag=PHA55_12450
NZ_CP116044.1	Protein Homology	CDS	2564757	2568155	.	-	0	ID=cds-WP_271287432.1;Parent=gene-PHA55_RS12455;Dbxref=Genbank:WP_271287432.1;Name=WP_271287432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415890.2;locus_tag=PHA55_RS12455;product=prophage tail fiber N-terminal domain-containing protein;protein_id=WP_271287432.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	2568220	2568372	.	-	.	ID=gene-PHA55_RS12460;Name=PHA55_RS12460;end_range=2568372,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS12460;old_locus_tag=PHA55_12455;partial=true;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	2568220	2568372	.	-	0	ID=cds-PHA55_RS12460;Parent=gene-PHA55_RS12460;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0044384;end_range=2568372,.;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309676.1;locus_tag=PHA55_RS12460;partial=true;product=Ail/Lom family outer membrane beta-barrel protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	2568482	2568811	.	+	.	ID=gene-PHA55_RS12465;Name=PHA55_RS12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12465;old_locus_tag=PHA55_12460
NZ_CP116044.1	Protein Homology	CDS	2568482	2568811	.	+	0	ID=cds-WP_186187288.1;Parent=gene-PHA55_RS12465;Dbxref=Genbank:WP_186187288.1;Name=WP_186187288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309671.1;locus_tag=PHA55_RS12465;product=phage tail protein;protein_id=WP_186187288.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2568811	2569509	.	+	.	ID=gene-PHA55_RS12470;Name=PHA55_RS12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12470;old_locus_tag=PHA55_12465
NZ_CP116044.1	Protein Homology	CDS	2568811	2569509	.	+	0	ID=cds-WP_271287433.1;Parent=gene-PHA55_RS12470;Dbxref=Genbank:WP_271287433.1;Name=WP_271287433.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309672.1;locus_tag=PHA55_RS12470;product=phage minor tail protein L;protein_id=WP_271287433.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2569515	2570258	.	+	.	ID=gene-PHA55_RS12475;Name=PHA55_RS12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12475;old_locus_tag=PHA55_12470
NZ_CP116044.1	Protein Homology	CDS	2569515	2570258	.	+	0	ID=cds-WP_139581070.1;Parent=gene-PHA55_RS12475;Dbxref=Genbank:WP_139581070.1;Name=WP_139581070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309673.1;locus_tag=PHA55_RS12475;product=C40 family peptidase;protein_id=WP_139581070.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2570222	2570797	.	+	.	ID=gene-PHA55_RS12480;Name=PHA55_RS12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12480;old_locus_tag=PHA55_12475
NZ_CP116044.1	Protein Homology	CDS	2570222	2570797	.	+	0	ID=cds-WP_250390651.1;Parent=gene-PHA55_RS12480;Dbxref=Genbank:WP_250390651.1;Name=WP_250390651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706645.1;locus_tag=PHA55_RS12480;product=tail assembly protein;protein_id=WP_250390651.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2570870	2571208	.	+	.	ID=gene-PHA55_RS12485;Name=PHA55_RS12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12485;old_locus_tag=PHA55_12480
NZ_CP116044.1	Protein Homology	CDS	2570870	2571208	.	+	0	ID=cds-WP_001332187.1;Parent=gene-PHA55_RS12485;Dbxref=Genbank:WP_001332187.1;Name=WP_001332187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001332187.1;locus_tag=PHA55_RS12485;product=hypothetical protein;protein_id=WP_001332187.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2571275	2574670	.	+	.	ID=gene-PHA55_RS12490;Name=PHA55_RS12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12490;old_locus_tag=PHA55_12485
NZ_CP116044.1	Protein Homology	CDS	2571275	2574670	.	+	0	ID=cds-WP_271287434.1;Parent=gene-PHA55_RS12490;Dbxref=Genbank:WP_271287434.1;Name=WP_271287434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309675.1;locus_tag=PHA55_RS12490;product=host specificity protein J;protein_id=WP_271287434.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	2574738	2575184	.	+	.	ID=gene-PHA55_RS12495;Name=PHA55_RS12495;end_range=2575184,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS12495;old_locus_tag=PHA55_12490;partial=true;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	2574738	2575184	.	+	0	ID=cds-PHA55_RS12495;Parent=gene-PHA55_RS12495;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0044384;end_range=2575184,.;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310969.1;locus_tag=PHA55_RS12495;partial=true;product=Ail/Lom family outer membrane beta-barrel protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	2575187	2577652	.	-	.	ID=gene-PHA55_RS12500;Name=PHA55_RS12500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS12500;old_locus_tag=PHA55_12495;partial=true;pseudo=true;start_range=.,2575187
NZ_CP116044.1	Protein Homology	CDS	2575187	2577652	.	-	0	ID=cds-PHA55_RS12500;Parent=gene-PHA55_RS12500;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309670.1;locus_tag=PHA55_RS12500;partial=true;product=phage tail tape measure protein;pseudo=true;start_range=.,2575187;transl_table=11
NZ_CP116044.1	RefSeq	gene	2577645	2578079	.	-	.	ID=gene-PHA55_RS12505;Name=PHA55_RS12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12505;old_locus_tag=PHA55_12500
NZ_CP116044.1	Protein Homology	CDS	2577645	2578079	.	-	0	ID=cds-WP_000459457.1-2;Parent=gene-PHA55_RS12505;Dbxref=Genbank:WP_000459457.1;Name=WP_000459457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309669.1;locus_tag=PHA55_RS12505;product=phage tail assembly protein T;protein_id=WP_000459457.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2578061	2578483	.	-	.	ID=gene-PHA55_RS12510;Name=PHA55_RS12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12510;old_locus_tag=PHA55_12505
NZ_CP116044.1	Protein Homology	CDS	2578061	2578483	.	-	0	ID=cds-WP_000479142.1-2;Parent=gene-PHA55_RS12510;Dbxref=Genbank:WP_000479142.1;Name=WP_000479142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309668.1;locus_tag=PHA55_RS12510;product=phage minor tail protein G;protein_id=WP_000479142.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2578499	2579239	.	-	.	ID=gene-PHA55_RS12515;Name=PHA55_RS12515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12515;old_locus_tag=PHA55_12510
NZ_CP116044.1	Protein Homology	CDS	2578499	2579239	.	-	0	ID=cds-WP_001358372.1-2;Parent=gene-PHA55_RS12515;Dbxref=Genbank:WP_001358372.1;Name=WP_001358372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309667.1;locus_tag=PHA55_RS12515;product=phage tail protein;protein_id=WP_001358372.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2579247	2579642	.	-	.	ID=gene-PHA55_RS12520;Name=PHA55_RS12520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12520;old_locus_tag=PHA55_12515
NZ_CP116044.1	Protein Homology	CDS	2579247	2579642	.	-	0	ID=cds-WP_000683105.1-2;Parent=gene-PHA55_RS12520;Dbxref=Genbank:WP_000683105.1;Name=WP_000683105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309666.1;locus_tag=PHA55_RS12520;product=phage minor tail U family protein;protein_id=WP_000683105.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2579639	2580217	.	-	.	ID=gene-PHA55_RS12525;Name=PHA55_RS12525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12525;old_locus_tag=PHA55_12520
NZ_CP116044.1	Protein Homology	CDS	2579639	2580217	.	-	0	ID=cds-WP_000975081.1-2;Parent=gene-PHA55_RS12525;Dbxref=Genbank:WP_000975081.1;Name=WP_000975081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309665.1;locus_tag=PHA55_RS12525;product=phage tail protein;protein_id=WP_000975081.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2580229	2580582	.	-	.	ID=gene-PHA55_RS12530;Name=PHA55_RS12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12530;old_locus_tag=PHA55_12525
NZ_CP116044.1	Protein Homology	CDS	2580229	2580582	.	-	0	ID=cds-WP_000785282.1-2;Parent=gene-PHA55_RS12530;Dbxref=Genbank:WP_000785282.1;Name=WP_000785282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309664.1;locus_tag=PHA55_RS12530;product=head-tail joining protein;protein_id=WP_000785282.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2580594	2580989	.	-	.	ID=gene-PHA55_RS12535;Name=PHA55_RS12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12535;old_locus_tag=PHA55_12530
NZ_CP116044.1	Protein Homology	CDS	2580594	2580989	.	-	0	ID=cds-WP_000158875.1-2;Parent=gene-PHA55_RS12535;Dbxref=Genbank:WP_000158875.1;Name=WP_000158875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309663.1;locus_tag=PHA55_RS12535;product=DNA-packaging protein FI;protein_id=WP_000158875.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2581031	2582056	.	-	.	ID=gene-PHA55_RS12540;Name=PHA55_RS12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12540;old_locus_tag=PHA55_12535
NZ_CP116044.1	Protein Homology	CDS	2581031	2582056	.	-	0	ID=cds-WP_000063254.1-2;Parent=gene-PHA55_RS12540;Dbxref=Genbank:WP_000063254.1;Name=WP_000063254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309662.1;locus_tag=PHA55_RS12540;product=major capsid protein;protein_id=WP_000063254.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2582112	2582444	.	-	.	ID=gene-PHA55_RS12545;Name=PHA55_RS12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12545;old_locus_tag=PHA55_12540
NZ_CP116044.1	Protein Homology	CDS	2582112	2582444	.	-	0	ID=cds-WP_001358225.1-2;Parent=gene-PHA55_RS12545;Dbxref=Genbank:WP_001358225.1;Name=WP_001358225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309661.1;locus_tag=PHA55_RS12545;product=head decoration protein;protein_id=WP_001358225.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2582454	2583773	.	-	.	ID=gene-PHA55_RS12550;Name=PHA55_RS12550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12550;old_locus_tag=PHA55_12545
NZ_CP116044.1	Protein Homology	CDS	2582454	2583773	.	-	0	ID=cds-WP_000123248.1-2;Parent=gene-PHA55_RS12550;Dbxref=Genbank:WP_000123248.1;Name=WP_000123248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309660.1;locus_tag=PHA55_RS12550;product=S49 family peptidase;protein_id=WP_000123248.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2583754	2585355	.	-	.	ID=gene-PHA55_RS12555;Name=PHA55_RS12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12555;old_locus_tag=PHA55_12550
NZ_CP116044.1	Protein Homology	CDS	2583754	2585355	.	-	0	ID=cds-WP_001345555.1-2;Parent=gene-PHA55_RS12555;Dbxref=Genbank:WP_001345555.1;Name=WP_001345555.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309659.1;locus_tag=PHA55_RS12555;product=phage portal protein;protein_id=WP_001345555.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2585352	2585558	.	-	.	ID=gene-PHA55_RS12560;Name=PHA55_RS12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12560;old_locus_tag=PHA55_12555
NZ_CP116044.1	Protein Homology	CDS	2585352	2585558	.	-	0	ID=cds-WP_000198149.1-2;Parent=gene-PHA55_RS12560;Dbxref=Genbank:WP_000198149.1;Name=WP_000198149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309658.1;locus_tag=PHA55_RS12560;product=gpW family protein;protein_id=WP_000198149.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2585555	2587480	.	-	.	ID=gene-PHA55_RS12565;Name=PHA55_RS12565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12565;old_locus_tag=PHA55_12560
NZ_CP116044.1	Protein Homology	CDS	2585555	2587480	.	-	0	ID=cds-WP_260589788.1-2;Parent=gene-PHA55_RS12565;Dbxref=Genbank:WP_260589788.1;Name=WP_260589788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309657.1;locus_tag=PHA55_RS12565;product=phage terminase large subunit family protein;protein_id=WP_260589788.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2587455	2588000	.	-	.	ID=gene-PHA55_RS12570;Name=nohA;gbkey=Gene;gene=nohA;gene_biotype=protein_coding;locus_tag=PHA55_RS12570;old_locus_tag=PHA55_12565
NZ_CP116044.1	Protein Homology	CDS	2587455	2588000	.	-	0	ID=cds-WP_000453587.1-2;Parent=gene-PHA55_RS12570;Dbxref=Genbank:WP_000453587.1;Name=WP_000453587.1;gbkey=CDS;gene=nohA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415092.1;locus_tag=PHA55_RS12570;product=DNA-packaging protein;protein_id=WP_000453587.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2588389	2588583	.	+	.	ID=gene-PHA55_RS12575;Name=PHA55_RS12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12575;old_locus_tag=PHA55_12570
NZ_CP116044.1	Protein Homology	CDS	2588389	2588583	.	+	0	ID=cds-WP_032145128.1;Parent=gene-PHA55_RS12575;Dbxref=Genbank:WP_032145128.1;Name=WP_032145128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001307652.1;locus_tag=PHA55_RS12575;product=YlcI/YnfO family protein;protein_id=WP_032145128.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2588834	2589040	.	-	.	ID=gene-PHA55_RS12580;Name=PHA55_RS12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12580;old_locus_tag=PHA55_12575
NZ_CP116044.1	Protein Homology	CDS	2588834	2589040	.	-	0	ID=cds-WP_020239410.1;Parent=gene-PHA55_RS12580;Dbxref=Genbank:WP_020239410.1;Name=WP_020239410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309654.1;locus_tag=PHA55_RS12580;product=hypothetical protein;protein_id=WP_020239410.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2589336	2589509	.	-	.	ID=gene-PHA55_RS12585;Name=gnsB;gbkey=Gene;gene=gnsB;gene_biotype=protein_coding;locus_tag=PHA55_RS12585;old_locus_tag=PHA55_12580
NZ_CP116044.1	Protein Homology	CDS	2589336	2589509	.	-	0	ID=cds-WP_001019207.1;Parent=gene-PHA55_RS12585;Dbxref=Genbank:WP_001019207.1;Name=WP_001019207.1;gbkey=CDS;gene=gnsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416068.2;locus_tag=PHA55_RS12585;product=addiction module toxin%2C GnsA/GnsB family;protein_id=WP_001019207.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2589682	2589912	.	-	.	ID=gene-PHA55_RS12590;Name=ynfN;gbkey=Gene;gene=ynfN;gene_biotype=protein_coding;locus_tag=PHA55_RS12590;old_locus_tag=PHA55_12585
NZ_CP116044.1	Protein Homology	CDS	2589682	2589912	.	-	0	ID=cds-WP_000720960.1;Parent=gene-PHA55_RS12590;Dbxref=Genbank:WP_000720960.1;Name=WP_000720960.1;gbkey=CDS;gene=ynfN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000720962.1;locus_tag=PHA55_RS12590;product=protein YnfN;protein_id=WP_000720960.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	2589944	2589982	.	-	.	ID=gene-PHA55_RS12595;Name=PHA55_RS12595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS12595;old_locus_tag=PHA55_12590;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	2589944	2589982	.	-	0	ID=cds-PHA55_RS12595;Parent=gene-PHA55_RS12595;Note=too short;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518789.1;locus_tag=PHA55_RS12595;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	2589985	2590173	.	-	.	ID=gene-PHA55_RS12600;Name=ynfQ;gbkey=Gene;gene=ynfQ;gene_biotype=protein_coding;locus_tag=PHA55_RS12600;old_locus_tag=PHA55_12595
NZ_CP116044.1	Protein Homology	CDS	2589985	2590173	.	-	0	ID=cds-WP_071526745.1;Parent=gene-PHA55_RS12600;Dbxref=Genbank:WP_071526745.1;Name=WP_071526745.1;gbkey=CDS;gene=ynfQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518790.1;locus_tag=PHA55_RS12600;product=cold-shock protein;protein_id=WP_071526745.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2590184	2590396	.	-	.	ID=gene-PHA55_RS12605;Name=cspI;gbkey=Gene;gene=cspI;gene_biotype=protein_coding;locus_tag=PHA55_RS12605;old_locus_tag=PHA55_12600
NZ_CP116044.1	Protein Homology	CDS	2590184	2590396	.	-	0	ID=cds-WP_000066495.1;Parent=gene-PHA55_RS12605;Dbxref=Genbank:WP_000066495.1;Name=WP_000066495.1;gbkey=CDS;gene=cspI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416070.1;locus_tag=PHA55_RS12605;product=cold shock protein CspI;protein_id=WP_000066495.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2590760	2591257	.	-	.	ID=gene-PHA55_RS12610;Name=rzpQ;gbkey=Gene;gene=rzpQ;gene_biotype=protein_coding;locus_tag=PHA55_RS12610;old_locus_tag=PHA55_12605
NZ_CP116044.1	Protein Homology	CDS	2590760	2591257	.	-	0	ID=cds-WP_001071776.1;Parent=gene-PHA55_RS12610;Dbxref=Genbank:WP_001071776.1;Name=WP_001071776.1;gbkey=CDS;gene=rzpQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416071.1;locus_tag=PHA55_RS12610;product=DUF2514 domain-containing protein;protein_id=WP_001071776.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2591254	2591787	.	-	.	ID=gene-PHA55_RS12615;Name=rrrQ;gbkey=Gene;gene=rrrQ;gene_biotype=protein_coding;locus_tag=PHA55_RS12615;old_locus_tag=PHA55_12610
NZ_CP116044.1	Protein Homology	CDS	2591254	2591787	.	-	0	ID=cds-WP_001092971.1;Parent=gene-PHA55_RS12615;Dbxref=Genbank:WP_001092971.1;Name=WP_001092971.1;gbkey=CDS;gene=rrrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416072.1;locus_tag=PHA55_RS12615;product=lysozyme;protein_id=WP_001092971.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2591784	2592095	.	-	.	ID=gene-PHA55_RS12620;Name=ydfR;gbkey=Gene;gene=ydfR;gene_biotype=protein_coding;locus_tag=PHA55_RS12620;old_locus_tag=PHA55_12615
NZ_CP116044.1	Protein Homology	CDS	2591784	2592095	.	-	0	ID=cds-WP_000189918.1;Parent=gene-PHA55_RS12620;Dbxref=Genbank:WP_000189918.1;Name=WP_000189918.1;gbkey=CDS;gene=ydfR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416073.1;locus_tag=PHA55_RS12620;product=DUF1327 domain-containing protein;protein_id=WP_000189918.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2592100	2592315	.	-	.	ID=gene-PHA55_RS12625;Name=essD;gbkey=Gene;gene=essD;gene_biotype=protein_coding;locus_tag=PHA55_RS12625;old_locus_tag=PHA55_12620
NZ_CP116044.1	Protein Homology	CDS	2592100	2592315	.	-	0	ID=cds-WP_000839587.1;Parent=gene-PHA55_RS12625;Dbxref=Genbank:WP_000839587.1;Name=WP_000839587.1;gbkey=CDS;gene=essD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415086.1;locus_tag=PHA55_RS12625;product=phage lysis protein EssD;protein_id=WP_000839587.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2592506	2593219	.	-	.	ID=gene-PHA55_RS12630;Name=PHA55_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12630;old_locus_tag=PHA55_12625
NZ_CP116044.1	Protein Homology	CDS	2592506	2593219	.	-	0	ID=cds-WP_033557399.1;Parent=gene-PHA55_RS12630;Dbxref=Genbank:WP_033557399.1;Name=WP_033557399.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019843086.1;locus_tag=PHA55_RS12630;product=helix-turn-helix domain-containing protein;protein_id=WP_033557399.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2593626	2594585	.	-	.	ID=gene-PHA55_RS12635;Name=PHA55_RS12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12635;old_locus_tag=PHA55_12630
NZ_CP116044.1	Protein Homology	CDS	2593626	2594585	.	-	0	ID=cds-WP_000592549.1;Parent=gene-PHA55_RS12635;Dbxref=Genbank:WP_000592549.1;Name=WP_000592549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016242627.1;locus_tag=PHA55_RS12635;product=DUF523 and DUF1722 domain-containing protein;protein_id=WP_000592549.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2594778	2595302	.	+	.	ID=gene-PHA55_RS12640;Name=PHA55_RS12640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12640;old_locus_tag=PHA55_12635
NZ_CP116044.1	Protein Homology	CDS	2594778	2595302	.	+	0	ID=cds-WP_000780584.1;Parent=gene-PHA55_RS12640;Dbxref=Genbank:WP_000780584.1;Name=WP_000780584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001587087.1;locus_tag=PHA55_RS12640;product=lipocalin family protein;protein_id=WP_000780584.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2595458	2595835	.	-	.	ID=gene-PHA55_RS12645;Name=PHA55_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12645;old_locus_tag=PHA55_12640
NZ_CP116044.1	Protein Homology	CDS	2595458	2595835	.	-	0	ID=cds-WP_001204787.1;Parent=gene-PHA55_RS12645;Dbxref=Genbank:WP_001204787.1;Name=WP_001204787.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016246965.1;locus_tag=PHA55_RS12645;product=antiterminator Q family protein;protein_id=WP_001204787.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2595853	2596902	.	-	.	ID=gene-PHA55_RS12650;Name=ydfU;gbkey=Gene;gene=ydfU;gene_biotype=protein_coding;locus_tag=PHA55_RS12650;old_locus_tag=PHA55_12645
NZ_CP116044.1	Protein Homology	CDS	2595853	2596902	.	-	0	ID=cds-WP_073514712.1;Parent=gene-PHA55_RS12650;Dbxref=Genbank:WP_073514712.1;Name=WP_073514712.1;gbkey=CDS;gene=ydfU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416078.4;locus_tag=PHA55_RS12650;product=DUF968 domain-containing protein;protein_id=WP_073514712.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2596904	2597182	.	-	.	ID=gene-PHA55_RS12655;Name=PHA55_RS12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12655;old_locus_tag=PHA55_12650
NZ_CP116044.1	Protein Homology	CDS	2596904	2597182	.	-	0	ID=cds-WP_001325325.1;Parent=gene-PHA55_RS12655;Dbxref=Genbank:WP_001325325.1;Name=WP_001325325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309802.1;locus_tag=PHA55_RS12655;product=hypothetical protein;protein_id=WP_001325325.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2597641	2597796	.	-	.	ID=gene-PHA55_RS12660;Name=hokD;gbkey=Gene;gene=hokD;gene_biotype=protein_coding;locus_tag=PHA55_RS12660;old_locus_tag=PHA55_12655
NZ_CP116044.1	Protein Homology	CDS	2597641	2597796	.	-	0	ID=cds-WP_000813254.1;Parent=gene-PHA55_RS12660;Dbxref=Genbank:WP_000813254.1;Name=WP_000813254.1;gbkey=CDS;gene=hokD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416080.1;locus_tag=PHA55_RS12660;product=type I toxin-antitoxin system toxin HokD;protein_id=WP_000813254.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2598445	2602077	.	-	.	ID=gene-PHA55_RS12665;Name=PHA55_RS12665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12665;old_locus_tag=PHA55_12660
NZ_CP116044.1	Protein Homology	CDS	2598445	2602077	.	-	0	ID=cds-WP_001278661.1;Parent=gene-PHA55_RS12665;Dbxref=Genbank:WP_001278661.1;Name=WP_001278661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001278661.1;locus_tag=PHA55_RS12665;product=hypothetical protein;protein_id=WP_001278661.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2602477	2602899	.	-	.	ID=gene-PHA55_RS12670;Name=PHA55_RS12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12670;old_locus_tag=PHA55_12665
NZ_CP116044.1	Protein Homology	CDS	2602477	2602899	.	-	0	ID=cds-WP_029393093.1;Parent=gene-PHA55_RS12670;Dbxref=Genbank:WP_029393093.1;Name=WP_029393093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151251.1;locus_tag=PHA55_RS12670;product=DUF977 family protein;protein_id=WP_029393093.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2602940	2604010	.	-	.	ID=gene-PHA55_RS12675;Name=PHA55_RS12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12675;old_locus_tag=PHA55_12670
NZ_CP116044.1	Protein Homology	CDS	2602940	2604010	.	-	0	ID=cds-WP_029393094.1;Parent=gene-PHA55_RS12675;Dbxref=Genbank:WP_029393094.1;Name=WP_029393094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001736248.1;locus_tag=PHA55_RS12675;product=hypothetical protein;protein_id=WP_029393094.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2604082	2604507	.	-	.	ID=gene-PHA55_RS12680;Name=PHA55_RS12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12680;old_locus_tag=PHA55_12675
NZ_CP116044.1	Protein Homology	CDS	2604082	2604507	.	-	0	ID=cds-WP_000693832.1;Parent=gene-PHA55_RS12680;Dbxref=Genbank:WP_000693832.1;Name=WP_000693832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309098.1;locus_tag=PHA55_RS12680;product=toxin YdaT family protein;protein_id=WP_000693832.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2604491	2604772	.	-	.	ID=gene-PHA55_RS12685;Name=PHA55_RS12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12685;old_locus_tag=PHA55_12680
NZ_CP116044.1	Protein Homology	CDS	2604491	2604772	.	-	0	ID=cds-WP_000391950.1;Parent=gene-PHA55_RS12685;Dbxref=Genbank:WP_000391950.1;Name=WP_000391950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003839211.1;locus_tag=PHA55_RS12685;product=YdaS family helix-turn-helix protein;protein_id=WP_000391950.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2604873	2605292	.	+	.	ID=gene-PHA55_RS12690;Name=PHA55_RS12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12690;old_locus_tag=PHA55_12685
NZ_CP116044.1	Protein Homology	CDS	2604873	2605292	.	+	0	ID=cds-WP_000362155.1;Parent=gene-PHA55_RS12690;Dbxref=Genbank:WP_000362155.1;Name=WP_000362155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000362153.1;locus_tag=PHA55_RS12690;product=hypothetical protein;protein_id=WP_000362155.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2605558	2605713	.	+	.	ID=gene-PHA55_RS12695;Name=ydfA;gbkey=Gene;gene=ydfA;gene_biotype=protein_coding;locus_tag=PHA55_RS12695;old_locus_tag=PHA55_12690
NZ_CP116044.1	Protein Homology	CDS	2605558	2605713	.	+	0	ID=cds-WP_000379575.1;Parent=gene-PHA55_RS12695;Dbxref=Genbank:WP_000379575.1;Name=WP_000379575.1;gbkey=CDS;gene=ydfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309092.1;locus_tag=PHA55_RS12695;product=DUF1391 family protein;protein_id=WP_000379575.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	2605715	2605816	.	+	.	ID=gene-PHA55_RS12700;Name=ydfB;end_range=2605816,.;gbkey=Gene;gene=ydfB;gene_biotype=pseudogene;locus_tag=PHA55_RS12700;old_locus_tag=PHA55_12695;partial=true;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	2605715	2605816	.	+	0	ID=cds-PHA55_RS12700;Parent=gene-PHA55_RS12700;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2605816,.;gbkey=CDS;gene=ydfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000344964.1;locus_tag=PHA55_RS12700;partial=true;product=protein YdfB;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	2606777	2606965	.	+	.	ID=gene-PHA55_RS12705;Name=dicB;gbkey=Gene;gene=dicB;gene_biotype=protein_coding;gene_synonym=ftsT;locus_tag=PHA55_RS12705;old_locus_tag=PHA55_12700
NZ_CP116044.1	Protein Homology	CDS	2606777	2606965	.	+	0	ID=cds-WP_000854559.1;Parent=gene-PHA55_RS12705;Dbxref=Genbank:WP_000854559.1;Name=WP_000854559.1;gbkey=CDS;gene=dicB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416092.1;locus_tag=PHA55_RS12705;product=cell division inhibition protein DicB;protein_id=WP_000854559.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2606962	2607153	.	+	.	ID=gene-PHA55_RS12710;Name=ydfD;gbkey=Gene;gene=ydfD;gene_biotype=protein_coding;locus_tag=PHA55_RS12710;old_locus_tag=PHA55_12705
NZ_CP116044.1	Protein Homology	CDS	2606962	2607153	.	+	0	ID=cds-WP_001083273.1;Parent=gene-PHA55_RS12710;Dbxref=Genbank:WP_001083273.1;Name=WP_001083273.1;gbkey=CDS;gene=ydfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416093.1;locus_tag=PHA55_RS12710;product=lysis protein YdfD;protein_id=WP_001083273.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2607247	2609718	.	+	.	ID=gene-PHA55_RS12715;Name=PHA55_RS12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12715;old_locus_tag=PHA55_12710
NZ_CP116044.1	Protein Homology	CDS	2607247	2609718	.	+	0	ID=cds-WP_271287435.1;Parent=gene-PHA55_RS12715;Dbxref=Genbank:WP_271287435.1;Name=WP_271287435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310313.1;locus_tag=PHA55_RS12715;product=3'-5' exoribonuclease;protein_id=WP_271287435.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2609791	2610042	.	+	.	ID=gene-PHA55_RS12720;Name=PHA55_RS12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12720;old_locus_tag=PHA55_12715
NZ_CP116044.1	Protein Homology	CDS	2609791	2610042	.	+	0	ID=cds-WP_000005552.1;Parent=gene-PHA55_RS12720;Dbxref=Genbank:WP_000005552.1;Name=WP_000005552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000005552.1;locus_tag=PHA55_RS12720;product=excisionase family protein;protein_id=WP_000005552.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2610077	2611357	.	+	.	ID=gene-PHA55_RS12725;Name=PHA55_RS12725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12725;old_locus_tag=PHA55_12720
NZ_CP116044.1	Protein Homology	CDS	2610077	2611357	.	+	0	ID=cds-WP_033557429.1;Parent=gene-PHA55_RS12725;Dbxref=Genbank:WP_033557429.1;Name=WP_033557429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686441.1;locus_tag=PHA55_RS12725;product=site-specific integrase;protein_id=WP_033557429.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2611545	2612564	.	-	.	ID=gene-PHA55_RS12730;Name=rspB;gbkey=Gene;gene=rspB;gene_biotype=protein_coding;locus_tag=PHA55_RS12730;old_locus_tag=PHA55_12725
NZ_CP116044.1	Protein Homology	CDS	2611545	2612564	.	-	0	ID=cds-WP_000836079.1;Parent=gene-PHA55_RS12730;Dbxref=Genbank:WP_000836079.1;Name=WP_000836079.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;gene=rspB;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416097.1;locus_tag=PHA55_RS12730;product=Zn-dependent oxidoreductase;protein_id=WP_000836079.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2612576	2613790	.	-	.	ID=gene-PHA55_RS12735;Name=rspA;gbkey=Gene;gene=rspA;gene_biotype=protein_coding;locus_tag=PHA55_RS12735;old_locus_tag=PHA55_12730
NZ_CP116044.1	Protein Homology	CDS	2612576	2613790	.	-	0	ID=cds-WP_001295394.1;Parent=gene-PHA55_RS12735;Dbxref=Genbank:WP_001295394.1;Name=WP_001295394.1;gbkey=CDS;gene=rspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=PHA55_RS12735;product=starvation-sensing protein RspA;protein_id=WP_001295394.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2613996	2614322	.	-	.	ID=gene-PHA55_RS12740;Name=ynfA;gbkey=Gene;gene=ynfA;gene_biotype=protein_coding;locus_tag=PHA55_RS12740;old_locus_tag=PHA55_12735
NZ_CP116044.1	Protein Homology	CDS	2613996	2614322	.	-	0	ID=cds-WP_000598292.1;Parent=gene-PHA55_RS12740;Dbxref=Genbank:WP_000598292.1;Name=WP_000598292.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ynfA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416099.1;locus_tag=PHA55_RS12740;product=YnfA family protein;protein_id=WP_000598292.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2614457	2614798	.	+	.	ID=gene-PHA55_RS12745;Name=ynfB;gbkey=Gene;gene=ynfB;gene_biotype=protein_coding;locus_tag=PHA55_RS12745;old_locus_tag=PHA55_12740
NZ_CP116044.1	Protein Homology	CDS	2614457	2614798	.	+	0	ID=cds-WP_000705197.1;Parent=gene-PHA55_RS12745;Dbxref=Genbank:WP_000705197.1;Name=WP_000705197.1;gbkey=CDS;gene=ynfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707472.1;locus_tag=PHA55_RS12745;product=DUF1283 family protein;protein_id=WP_000705197.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2614833	2615393	.	+	.	ID=gene-PHA55_RS12750;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=PHA55_RS12750;old_locus_tag=PHA55_12745
NZ_CP116044.1	Protein Homology	CDS	2614833	2615393	.	+	0	ID=cds-WP_001138581.1;Parent=gene-PHA55_RS12750;Dbxref=Genbank:WP_001138581.1;Name=WP_001138581.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310317.1;locus_tag=PHA55_RS12750;product=spermidine N1-acetyltransferase;protein_id=WP_001138581.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2615396	2616106	.	-	.	ID=gene-PHA55_RS12755;Name=ynfC;gbkey=Gene;gene=ynfC;gene_biotype=protein_coding;locus_tag=PHA55_RS12755;old_locus_tag=PHA55_12750
NZ_CP116044.1	Protein Homology	CDS	2615396	2616106	.	-	0	ID=cds-WP_001321287.1;Parent=gene-PHA55_RS12755;Dbxref=Genbank:WP_001321287.1;Name=WP_001321287.1;Ontology_term=GO:0005886;gbkey=CDS;gene=ynfC;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416102.2;locus_tag=PHA55_RS12755;product=YnfC family lipoprotein;protein_id=WP_001321287.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2616214	2616519	.	+	.	ID=gene-PHA55_RS12760;Name=ynfD;gbkey=Gene;gene=ynfD;gene_biotype=protein_coding;locus_tag=PHA55_RS12760;old_locus_tag=PHA55_12755
NZ_CP116044.1	Protein Homology	CDS	2616214	2616519	.	+	0	ID=cds-WP_001295396.1;Parent=gene-PHA55_RS12760;Dbxref=Genbank:WP_001295396.1;Name=WP_001295396.1;gbkey=CDS;gene=ynfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707474.2;locus_tag=PHA55_RS12760;product=DUF1161 domain-containing protein;protein_id=WP_001295396.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2616718	2619144	.	+	.	ID=gene-PHA55_RS12765;Name=ynfE;gbkey=Gene;gene=ynfE;gene_biotype=protein_coding;locus_tag=PHA55_RS12765;old_locus_tag=PHA55_12760
NZ_CP116044.1	Protein Homology	CDS	2616718	2619144	.	+	0	ID=cds-WP_000041534.1;Parent=gene-PHA55_RS12765;Dbxref=Genbank:WP_000041534.1;Name=WP_000041534.1;gbkey=CDS;gene=ynfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416104.1;locus_tag=PHA55_RS12765;product=dimethyl sulfoxide reductase subunit A;protein_id=WP_000041534.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2619205	2621628	.	+	.	ID=gene-PHA55_RS12770;Name=ynfF;gbkey=Gene;gene=ynfF;gene_biotype=protein_coding;locus_tag=PHA55_RS12770;old_locus_tag=PHA55_12765
NZ_CP116044.1	Protein Homology	CDS	2619205	2621628	.	+	0	ID=cds-WP_001340362.1;Parent=gene-PHA55_RS12770;Dbxref=Genbank:WP_001340362.1;Name=WP_001340362.1;gbkey=CDS;gene=ynfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416105.4;locus_tag=PHA55_RS12770;product=dimethyl sulfoxide reductase subunit A;protein_id=WP_001340362.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2621639	2622256	.	+	.	ID=gene-PHA55_RS12775;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=PHA55_RS12775;old_locus_tag=PHA55_12770
NZ_CP116044.1	Protein Homology	CDS	2621639	2622256	.	+	0	ID=cds-WP_000213028.1;Parent=gene-PHA55_RS12775;Dbxref=Genbank:WP_000213028.1;Name=WP_000213028.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=PHA55_RS12775;product=dimethylsulfoxide reductase subunit B;protein_id=WP_000213028.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2622258	2623112	.	+	.	ID=gene-PHA55_RS12780;Name=ynfH;gbkey=Gene;gene=ynfH;gene_biotype=protein_coding;locus_tag=PHA55_RS12780;old_locus_tag=PHA55_12775
NZ_CP116044.1	Protein Homology	CDS	2622258	2623112	.	+	0	ID=cds-WP_000526492.1;Parent=gene-PHA55_RS12780;Dbxref=Genbank:WP_000526492.1;Name=WP_000526492.1;gbkey=CDS;gene=ynfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416107.1;locus_tag=PHA55_RS12780;product=dimethyl sulfoxide reductase anchor subunit;protein_id=WP_000526492.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2623155	2623769	.	+	.	ID=gene-PHA55_RS12785;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=PHA55_RS12785;old_locus_tag=PHA55_12780
NZ_CP116044.1	Protein Homology	CDS	2623155	2623769	.	+	0	ID=cds-WP_000148710.1;Parent=gene-PHA55_RS12785;Dbxref=Genbank:WP_000148710.1;Name=WP_000148710.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707489.2;locus_tag=PHA55_RS12785;product=Tat proofreading chaperone DmsD;protein_id=WP_000148710.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2623929	2625221	.	+	.	ID=gene-PHA55_RS12790;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=protein_coding;locus_tag=PHA55_RS12790;old_locus_tag=PHA55_12785
NZ_CP116044.1	Protein Homology	CDS	2623929	2625221	.	+	0	ID=cds-WP_001315626.1;Parent=gene-PHA55_RS12790;Dbxref=Genbank:WP_001315626.1;Name=WP_001315626.1;Ontology_term=GO:0006821,GO:0010447,GO:0005247,GO:0016020;gbkey=CDS;gene=clcB;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001296088.1;locus_tag=PHA55_RS12790;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_001315626.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2625174	2625869	.	-	.	ID=gene-PHA55_RS12795;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=PHA55_RS12795;old_locus_tag=PHA55_12790
NZ_CP116044.1	Protein Homology	CDS	2625174	2625869	.	-	0	ID=cds-WP_000919231.1;Parent=gene-PHA55_RS12795;Dbxref=Genbank:WP_000919231.1;Name=WP_000919231.1;Ontology_term=GO:0009102,GO:0004141;gbkey=CDS;gene=bioD;go_function=dethiobiotin synthase activity|0004141||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310326.2;locus_tag=PHA55_RS12795;product=dethiobiotin synthase;protein_id=WP_000919231.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2625994	2627214	.	-	.	ID=gene-PHA55_RS12800;Name=mlc;gbkey=Gene;gene=mlc;gene_biotype=protein_coding;gene_synonym=dgsA;locus_tag=PHA55_RS12800;old_locus_tag=PHA55_12795
NZ_CP116044.1	Protein Homology	CDS	2625994	2627214	.	-	0	ID=cds-WP_000225276.1;Parent=gene-PHA55_RS12800;Dbxref=Genbank:WP_000225276.1;Name=WP_000225276.1;gbkey=CDS;gene=mlc;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310327.1;locus_tag=PHA55_RS12800;product=DNA-binding transcriptional repressor Mlc;protein_id=WP_000225276.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2627349	2628242	.	-	.	ID=gene-PHA55_RS12805;Name=ynfL;gbkey=Gene;gene=ynfL;gene_biotype=protein_coding;locus_tag=PHA55_RS12805;old_locus_tag=PHA55_12800
NZ_CP116044.1	Protein Homology	CDS	2627349	2628242	.	-	0	ID=cds-WP_001019530.1;Parent=gene-PHA55_RS12805;Dbxref=Genbank:WP_001019530.1;Name=WP_001019530.1;gbkey=CDS;gene=ynfL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310328.1;locus_tag=PHA55_RS12805;product=LysR family transcriptional regulator;protein_id=WP_001019530.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2628349	2629602	.	+	.	ID=gene-PHA55_RS12810;Name=ynfM;gbkey=Gene;gene=ynfM;gene_biotype=protein_coding;locus_tag=PHA55_RS12810;old_locus_tag=PHA55_12805
NZ_CP116044.1	Protein Homology	CDS	2628349	2629602	.	+	0	ID=cds-WP_260589792.1;Parent=gene-PHA55_RS12810;Dbxref=Genbank:WP_260589792.1;Name=WP_260589792.1;gbkey=CDS;gene=ynfM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416113.1;locus_tag=PHA55_RS12810;product=MFS transporter;protein_id=WP_260589792.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2630026	2630334	.	+	.	ID=gene-PHA55_RS12815;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=PHA55_RS12815;old_locus_tag=PHA55_12810
NZ_CP116044.1	Protein Homology	CDS	2630026	2630334	.	+	0	ID=cds-WP_001376418.1;Parent=gene-PHA55_RS12815;Dbxref=Genbank:WP_001376418.1;Name=WP_001376418.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310330.2;locus_tag=PHA55_RS12815;product=acid resistance repetitive basic protein Asr;protein_id=WP_001376418.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2630427	2630510	.	+	.	ID=gene-PHA55_RS12820;Name=PHA55_RS12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS12820;old_locus_tag=PHA55_12815
NZ_CP116044.1	Protein Homology	CDS	2630427	2630510	.	+	0	ID=cds-WP_000233090.1;Parent=gene-PHA55_RS12820;Dbxref=Genbank:WP_000233090.1;Name=WP_000233090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165320.1;locus_tag=PHA55_RS12820;product=hypothetical protein;protein_id=WP_000233090.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2630610	2631431	.	+	.	ID=gene-PHA55_RS12825;Name=ydgD;gbkey=Gene;gene=ydgD;gene_biotype=protein_coding;locus_tag=PHA55_RS12825;old_locus_tag=PHA55_12820
NZ_CP116044.1	Protein Homology	CDS	2630610	2631431	.	+	0	ID=cds-WP_001260855.1;Parent=gene-PHA55_RS12825;Dbxref=Genbank:WP_001260855.1;Name=WP_001260855.1;gbkey=CDS;gene=ydgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707495.1;locus_tag=PHA55_RS12825;product=serine protease;protein_id=WP_001260855.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2631470	2631799	.	-	.	ID=gene-PHA55_RS12830;Name=mdtI;gbkey=Gene;gene=mdtI;gene_biotype=protein_coding;locus_tag=PHA55_RS12830;old_locus_tag=PHA55_12825
NZ_CP116044.1	Protein Homology	CDS	2631470	2631799	.	-	0	ID=cds-WP_000046661.1;Parent=gene-PHA55_RS12830;Dbxref=Genbank:WP_000046661.1;Name=WP_000046661.1;gbkey=CDS;gene=mdtI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310332.1;locus_tag=PHA55_RS12830;product=multidrug/spermidine efflux SMR transporter subunit MdtI;protein_id=WP_000046661.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2631786	2632151	.	-	.	ID=gene-PHA55_RS12835;Name=mdtJ;gbkey=Gene;gene=mdtJ;gene_biotype=protein_coding;locus_tag=PHA55_RS12835;old_locus_tag=PHA55_12830
NZ_CP116044.1	Protein Homology	CDS	2631786	2632151	.	-	0	ID=cds-WP_000276149.1;Parent=gene-PHA55_RS12835;Dbxref=Genbank:WP_000276149.1;Name=WP_000276149.1;Ontology_term=GO:0015848,GO:0015606,GO:0016020;gbkey=CDS;gene=mdtJ;go_component=membrane|0016020||IEA;go_function=spermidine transmembrane transporter activity|0015606||IEA;go_process=spermidine transport|0015848||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310333.1;locus_tag=PHA55_RS12835;product=multidrug/spermidine efflux SMR transporter subunit MdtJ;protein_id=WP_000276149.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2632563	2633597	.	+	.	ID=gene-PHA55_RS12840;Name=tqsA;gbkey=Gene;gene=tqsA;gene_biotype=protein_coding;locus_tag=PHA55_RS12840;old_locus_tag=PHA55_12835
NZ_CP116044.1	Protein Homology	CDS	2632563	2633597	.	+	0	ID=cds-WP_001118241.1;Parent=gene-PHA55_RS12840;Dbxref=Genbank:WP_001118241.1;Name=WP_001118241.1;gbkey=CDS;gene=tqsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416118.1;locus_tag=PHA55_RS12840;product=AI-2 transporter TqsA;protein_id=WP_001118241.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2633622	2635010	.	-	.	ID=gene-PHA55_RS12845;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=PHA55_RS12845;old_locus_tag=PHA55_12840
NZ_CP116044.1	Protein Homology	CDS	2633622	2635010	.	-	0	ID=cds-WP_000014036.1;Parent=gene-PHA55_RS12845;Dbxref=Genbank:WP_000014036.1;Name=WP_000014036.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=NAD(P)+ transhydrogenase (AB-specific) activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=PHA55_RS12845;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_000014036.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2635021	2636553	.	-	.	ID=gene-PHA55_RS12850;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=PHA55_RS12850;old_locus_tag=PHA55_12845
NZ_CP116044.1	Protein Homology	CDS	2635021	2636553	.	-	0	ID=cds-WP_001295398.1;Parent=gene-PHA55_RS12850;Dbxref=Genbank:WP_001295398.1;Name=WP_001295398.1;Ontology_term=GO:0008750;gbkey=CDS;gene=pntA;go_function=NAD(P)+ transhydrogenase (AB-specific) activity|0008750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416120.1;locus_tag=PHA55_RS12850;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_001295398.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2637077	2638021	.	+	.	ID=gene-PHA55_RS12855;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=PHA55_RS12855;old_locus_tag=PHA55_12850
NZ_CP116044.1	Protein Homology	CDS	2637077	2638021	.	+	0	ID=cds-WP_000769322.1;Parent=gene-PHA55_RS12855;Dbxref=Genbank:WP_000769322.1;Name=WP_000769322.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310337.1;locus_tag=PHA55_RS12855;product=DUF1471 family protein YdgH;protein_id=WP_000769322.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2638207	2639589	.	+	.	ID=gene-PHA55_RS12860;Name=ydgI;gbkey=Gene;gene=ydgI;gene_biotype=protein_coding;locus_tag=PHA55_RS12860;old_locus_tag=PHA55_12855
NZ_CP116044.1	Protein Homology	CDS	2638207	2639589	.	+	0	ID=cds-WP_000412379.1;Parent=gene-PHA55_RS12860;Dbxref=Genbank:WP_000412379.1;Name=WP_000412379.1;gbkey=CDS;gene=ydgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416122.1;locus_tag=PHA55_RS12860;product=amino acid permease;protein_id=WP_000412379.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2639626	2640348	.	+	.	ID=gene-PHA55_RS12865;Name=folM;gbkey=Gene;gene=folM;gene_biotype=protein_coding;locus_tag=PHA55_RS12865;old_locus_tag=PHA55_12860
NZ_CP116044.1	Protein Homology	CDS	2639626	2640348	.	+	0	ID=cds-WP_271287436.1;Parent=gene-PHA55_RS12865;Dbxref=Genbank:WP_271287436.1;Name=WP_271287436.1;Ontology_term=GO:0016491;gbkey=CDS;gene=folM;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310339.1;locus_tag=PHA55_RS12865;product=dihydromonapterin reductase;protein_id=WP_271287436.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2640345	2640680	.	-	.	ID=gene-PHA55_RS12870;Name=ydgC;gbkey=Gene;gene=ydgC;gene_biotype=protein_coding;locus_tag=PHA55_RS12870;old_locus_tag=PHA55_12865
NZ_CP116044.1	Protein Homology	CDS	2640345	2640680	.	-	0	ID=cds-WP_000524868.1;Parent=gene-PHA55_RS12870;Dbxref=Genbank:WP_000524868.1;Name=WP_000524868.1;gbkey=CDS;gene=ydgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310340.1;locus_tag=PHA55_RS12870;product=GlpM family protein;protein_id=WP_000524868.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2640809	2641528	.	+	.	ID=gene-PHA55_RS12875;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=PHA55_RS12875;old_locus_tag=PHA55_12870
NZ_CP116044.1	Protein Homology	CDS	2640809	2641528	.	+	0	ID=cds-WP_001092519.1;Parent=gene-PHA55_RS12875;Dbxref=Genbank:WP_001092519.1;Name=WP_001092519.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416125.2;locus_tag=PHA55_RS12875;product=two-component system response regulator RstA;protein_id=WP_001092519.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2641532	2642833	.	+	.	ID=gene-PHA55_RS12880;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=PHA55_RS12880;old_locus_tag=PHA55_12875
NZ_CP116044.1	Protein Homology	CDS	2641532	2642833	.	+	0	ID=cds-WP_000732526.1;Parent=gene-PHA55_RS12880;Dbxref=Genbank:WP_000732526.1;Name=WP_000732526.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=rstB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310342.2;locus_tag=PHA55_RS12880;product=two-component system sensor histidine kinase RstB;protein_id=WP_000732526.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2642909	2643838	.	+	.	ID=gene-PHA55_RS12885;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=PHA55_RS12885;old_locus_tag=PHA55_12880
NZ_CP116044.1	Protein Homology	CDS	2642909	2643838	.	+	0	ID=cds-WP_000135186.1;Parent=gene-PHA55_RS12885;Dbxref=Genbank:WP_000135186.1;Name=WP_000135186.1;Ontology_term=GO:0006274,GO:0003677;gbkey=CDS;gene=tus;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707509.2;locus_tag=PHA55_RS12885;product=DNA replication terminus site-binding protein;protein_id=WP_000135186.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2643835	2645238	.	-	.	ID=gene-PHA55_RS12890;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=PHA55_RS12890;old_locus_tag=PHA55_12885
NZ_CP116044.1	Protein Homology	CDS	2643835	2645238	.	-	0	ID=cds-WP_001099108.1;Parent=gene-PHA55_RS12890;Dbxref=Genbank:WP_001099108.1;Name=WP_001099108.1;Ontology_term=GO:0006099,GO:0004333;gbkey=CDS;gene=fumC;go_function=fumarate hydratase activity|0004333||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310344.1;locus_tag=PHA55_RS12890;product=class II fumarate hydratase;protein_id=WP_001099108.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2645381	2647027	.	-	.	ID=gene-PHA55_RS12895;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=PHA55_RS12895;old_locus_tag=PHA55_12890
NZ_CP116044.1	Protein Homology	CDS	2645381	2647027	.	-	0	ID=cds-WP_000066628.1;Parent=gene-PHA55_RS12895;Dbxref=Genbank:WP_000066628.1;Name=WP_000066628.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066594.1;locus_tag=PHA55_RS12895;product=class I fumarate hydratase;protein_id=WP_000066628.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2647226	2648401	.	+	.	ID=gene-PHA55_RS12900;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=PHA55_RS12900;old_locus_tag=PHA55_12895
NZ_CP116044.1	Protein Homology	CDS	2647226	2648401	.	+	0	ID=cds-WP_001170701.1;Parent=gene-PHA55_RS12900;Dbxref=Genbank:WP_001170701.1;Name=WP_001170701.1;Ontology_term=GO:0009298,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=GDP-mannose biosynthetic process|0009298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416130.3;locus_tag=PHA55_RS12900;product=mannose-6-phosphate isomerase;protein_id=WP_001170701.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2648502	2650010	.	+	.	ID=gene-PHA55_RS12905;Name=ydgA;gbkey=Gene;gene=ydgA;gene_biotype=protein_coding;locus_tag=PHA55_RS12905;old_locus_tag=PHA55_12900
NZ_CP116044.1	Protein Homology	CDS	2648502	2650010	.	+	0	ID=cds-WP_001043342.1;Parent=gene-PHA55_RS12905;Dbxref=Genbank:WP_001043342.1;Name=WP_001043342.1;gbkey=CDS;gene=ydgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310347.1;locus_tag=PHA55_RS12905;product=YdgA family protein;protein_id=WP_001043342.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2650055	2651320	.	-	.	ID=gene-PHA55_RS12910;Name=uidC;gbkey=Gene;gene=uidC;gene_biotype=protein_coding;locus_tag=PHA55_RS12910;old_locus_tag=PHA55_12905
NZ_CP116044.1	Protein Homology	CDS	2650055	2651320	.	-	0	ID=cds-WP_001227018.1;Parent=gene-PHA55_RS12910;Dbxref=Genbank:WP_001227018.1;Name=WP_001227018.1;gbkey=CDS;gene=uidC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416132.2;locus_tag=PHA55_RS12910;product=glucuronide uptake porin UidC;protein_id=WP_001227018.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2651359	2652732	.	-	.	ID=gene-PHA55_RS12915;Name=uidB;gbkey=Gene;gene=uidB;gene_biotype=protein_coding;locus_tag=PHA55_RS12915;old_locus_tag=PHA55_12910
NZ_CP116044.1	Protein Homology	CDS	2651359	2652732	.	-	0	ID=cds-WP_001075893.1;Parent=gene-PHA55_RS12915;Dbxref=Genbank:WP_001075893.1;Name=WP_001075893.1;Ontology_term=GO:0006810,GO:0022857,GO:0016020;gbkey=CDS;gene=uidB;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416133.1;locus_tag=PHA55_RS12915;product=glucuronide transporter;protein_id=WP_001075893.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2652729	2654540	.	-	.	ID=gene-PHA55_RS12920;Name=uidA;gbkey=Gene;gene=uidA;gene_biotype=protein_coding;locus_tag=PHA55_RS12920;old_locus_tag=PHA55_12915
NZ_CP116044.1	Protein Homology	CDS	2652729	2654540	.	-	0	ID=cds-WP_000945878.1;Parent=gene-PHA55_RS12920;Dbxref=Genbank:WP_000945878.1;Name=WP_000945878.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=uidA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416134.1;locus_tag=PHA55_RS12920;product=beta-glucuronidase;protein_id=WP_000945878.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2654928	2655518	.	-	.	ID=gene-PHA55_RS12925;Name=uidR;gbkey=Gene;gene=uidR;gene_biotype=protein_coding;locus_tag=PHA55_RS12925;old_locus_tag=PHA55_12920
NZ_CP116044.1	Protein Homology	CDS	2654928	2655518	.	-	0	ID=cds-WP_032197321.1;Parent=gene-PHA55_RS12925;Dbxref=Genbank:WP_032197321.1;Name=WP_032197321.1;gbkey=CDS;gene=uidR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310353.1;locus_tag=PHA55_RS12925;product=DNA-binding transcriptional regulator UidR;protein_id=WP_032197321.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2655747	2656514	.	-	.	ID=gene-PHA55_RS12930;Name=hdhA;gbkey=Gene;gene=hdhA;gene_biotype=protein_coding;locus_tag=PHA55_RS12930;old_locus_tag=PHA55_12925
NZ_CP116044.1	Protein Homology	CDS	2655747	2656514	.	-	0	ID=cds-WP_000483362.1;Parent=gene-PHA55_RS12930;Dbxref=Genbank:WP_000483362.1;Name=WP_000483362.1;gbkey=CDS;gene=hdhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310354.1;locus_tag=PHA55_RS12930;product=7-alpha-hydroxysteroid dehydrogenase;protein_id=WP_000483362.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2656626	2657654	.	-	.	ID=gene-PHA55_RS12935;Name=malI;gbkey=Gene;gene=malI;gene_biotype=protein_coding;locus_tag=PHA55_RS12935;old_locus_tag=PHA55_12930
NZ_CP116044.1	Protein Homology	CDS	2656626	2657654	.	-	0	ID=cds-WP_000179513.1;Parent=gene-PHA55_RS12935;Dbxref=Genbank:WP_000179513.1;Name=WP_000179513.1;gbkey=CDS;gene=malI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310355.1;locus_tag=PHA55_RS12935;product=mal regulon transcriptional regulator MalI;protein_id=WP_000179513.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2657829	2659421	.	+	.	ID=gene-PHA55_RS12940;Name=malX;gbkey=Gene;gene=malX;gene_biotype=protein_coding;locus_tag=PHA55_RS12940;old_locus_tag=PHA55_12935
NZ_CP116044.1	Protein Homology	CDS	2657829	2659421	.	+	0	ID=cds-WP_000125609.1;Parent=gene-PHA55_RS12940;Dbxref=Genbank:WP_000125609.1;Name=WP_000125609.1;gbkey=CDS;gene=malX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416138.1;locus_tag=PHA55_RS12940;product=PTS maltose transporter subunit IICB;protein_id=WP_000125609.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2659431	2660603	.	+	.	ID=gene-PHA55_RS12945;Name=malY;gbkey=Gene;gene=malY;gene_biotype=protein_coding;locus_tag=PHA55_RS12945;old_locus_tag=PHA55_12940
NZ_CP116044.1	Protein Homology	CDS	2659431	2660603	.	+	0	ID=cds-WP_032197320.1;Parent=gene-PHA55_RS12945;Dbxref=Genbank:WP_032197320.1;Name=WP_032197320.1;gbkey=CDS;gene=malY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310357.1;locus_tag=PHA55_RS12945;product=bifunctional maltose regulon transcriptional repressor/cystathionine beta-lyase MalY;protein_id=WP_032197320.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2660707	2661708	.	+	.	ID=gene-PHA55_RS12950;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=PHA55_RS12950;old_locus_tag=PHA55_12945
NZ_CP116044.1	Protein Homology	CDS	2660707	2661708	.	+	0	ID=cds-WP_000567490.1;Parent=gene-PHA55_RS12950;Dbxref=Genbank:WP_000567490.1;Name=WP_000567490.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416140.1;locus_tag=PHA55_RS12950;product=adenosine deaminase;protein_id=WP_000567490.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2661743	2662783	.	-	.	ID=gene-PHA55_RS12955;Name=ydgJ;gbkey=Gene;gene=ydgJ;gene_biotype=protein_coding;locus_tag=PHA55_RS12955;old_locus_tag=PHA55_12950
NZ_CP116044.1	Protein Homology	CDS	2661743	2662783	.	-	0	ID=cds-WP_001282516.1;Parent=gene-PHA55_RS12955;Dbxref=Genbank:WP_001282516.1;Name=WP_001282516.1;gbkey=CDS;gene=ydgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310359.2;locus_tag=PHA55_RS12955;product=oxidoreductase;protein_id=WP_001282516.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2663026	2663151	.	+	.	ID=gene-PHA55_RS12960;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=PHA55_RS12960;old_locus_tag=PHA55_12955
NZ_CP116044.1	Protein Homology	CDS	2663026	2663151	.	+	0	ID=cds-WP_001300888.1;Parent=gene-PHA55_RS12960;Dbxref=Genbank:WP_001300888.1;Name=WP_001300888.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025303.1;locus_tag=PHA55_RS12960;product=division septum protein Blr;protein_id=WP_001300888.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2663424	2663639	.	+	.	ID=gene-PHA55_RS12965;Name=ydgT;gbkey=Gene;gene=ydgT;gene_biotype=protein_coding;locus_tag=PHA55_RS12965;old_locus_tag=PHA55_12960
NZ_CP116044.1	Protein Homology	CDS	2663424	2663639	.	+	0	ID=cds-WP_000217950.1;Parent=gene-PHA55_RS12965;Dbxref=Genbank:WP_000217950.1;Name=WP_000217950.1;gbkey=CDS;gene=ydgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310361.1;locus_tag=PHA55_RS12965;product=transcription modulator YdgT;protein_id=WP_000217950.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2663725	2664165	.	+	.	ID=gene-PHA55_RS12970;Name=ydgK;gbkey=Gene;gene=ydgK;gene_biotype=protein_coding;locus_tag=PHA55_RS12970;old_locus_tag=PHA55_12965
NZ_CP116044.1	Protein Homology	CDS	2663725	2664165	.	+	0	ID=cds-WP_000214176.1;Parent=gene-PHA55_RS12970;Dbxref=Genbank:WP_000214176.1;Name=WP_000214176.1;gbkey=CDS;gene=ydgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707526.2;locus_tag=PHA55_RS12970;product=DUF2569 domain-containing protein;protein_id=WP_000214176.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2664242	2664823	.	+	.	ID=gene-PHA55_RS12975;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=PHA55_RS12975;old_locus_tag=PHA55_12970
NZ_CP116044.1	Protein Homology	CDS	2664242	2664823	.	+	0	ID=cds-WP_000133193.1;Parent=gene-PHA55_RS12975;Dbxref=Genbank:WP_000133193.1;Name=WP_000133193.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=PHA55_RS12975;product=electron transport complex subunit RsxA;protein_id=WP_000133193.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2664823	2665401	.	+	.	ID=gene-PHA55_RS12980;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=PHA55_RS12980;old_locus_tag=PHA55_12975
NZ_CP116044.1	Protein Homology	CDS	2664823	2665401	.	+	0	ID=cds-WP_000991809.1;Parent=gene-PHA55_RS12980;Dbxref=Genbank:WP_000991809.1;Name=WP_000991809.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310364.1;locus_tag=PHA55_RS12980;product=electron transport complex subunit RsxB;protein_id=WP_000991809.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2665394	2667520	.	+	.	ID=gene-PHA55_RS12985;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=PHA55_RS12985;old_locus_tag=PHA55_12980
NZ_CP116044.1	Protein Homology	CDS	2665394	2667520	.	+	0	ID=cds-WP_000915770.1;Parent=gene-PHA55_RS12985;Dbxref=Genbank:WP_000915770.1;Name=WP_000915770.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416146.1;locus_tag=PHA55_RS12985;product=electron transport complex subunit RsxC;protein_id=WP_000915770.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2667521	2668579	.	+	.	ID=gene-PHA55_RS12990;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=PHA55_RS12990;old_locus_tag=PHA55_12985
NZ_CP116044.1	Protein Homology	CDS	2667521	2668579	.	+	0	ID=cds-WP_000231922.1;Parent=gene-PHA55_RS12990;Dbxref=Genbank:WP_000231922.1;Name=WP_000231922.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310366.1;locus_tag=PHA55_RS12990;product=electron transport complex subunit RsxD;protein_id=WP_000231922.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2668583	2669203	.	+	.	ID=gene-PHA55_RS12995;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=PHA55_RS12995;old_locus_tag=PHA55_12990
NZ_CP116044.1	Protein Homology	CDS	2668583	2669203	.	+	0	ID=cds-WP_000920778.1;Parent=gene-PHA55_RS12995;Dbxref=Genbank:WP_000920778.1;Name=WP_000920778.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416148.1;locus_tag=PHA55_RS12995;product=electron transport complex subunit RsxG;protein_id=WP_000920778.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2669207	2669902	.	+	.	ID=gene-PHA55_RS13000;Name=rsxE;gbkey=Gene;gene=rsxE;gene_biotype=protein_coding;locus_tag=PHA55_RS13000;old_locus_tag=PHA55_12995
NZ_CP116044.1	Protein Homology	CDS	2669207	2669902	.	+	0	ID=cds-WP_001289654.1;Parent=gene-PHA55_RS13000;Dbxref=Genbank:WP_001289654.1;Name=WP_001289654.1;gbkey=CDS;gene=rsxE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416149.1;locus_tag=PHA55_RS13000;product=electron transport complex subunit RsxE;protein_id=WP_001289654.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2669902	2670537	.	+	.	ID=gene-PHA55_RS13005;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=PHA55_RS13005;old_locus_tag=PHA55_13000
NZ_CP116044.1	Protein Homology	CDS	2669902	2670537	.	+	0	ID=cds-WP_001030339.1;Parent=gene-PHA55_RS13005;Dbxref=Genbank:WP_001030339.1;Name=WP_001030339.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416150.1;locus_tag=PHA55_RS13005;product=endonuclease III;protein_id=WP_001030339.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2671148	2672650	.	+	.	ID=gene-PHA55_RS13010;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;locus_tag=PHA55_RS13010;old_locus_tag=PHA55_13005
NZ_CP116044.1	Protein Homology	CDS	2671148	2672650	.	+	0	ID=cds-WP_000100931.1;Parent=gene-PHA55_RS13010;Dbxref=Genbank:WP_000100931.1;Name=WP_000100931.1;Ontology_term=GO:0015833,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpA;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416151.1;locus_tag=PHA55_RS13010;product=dipeptide/tripeptide permease DtpA;protein_id=WP_000100931.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2672756	2673361	.	+	.	ID=gene-PHA55_RS13015;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=PHA55_RS13015;old_locus_tag=PHA55_13010
NZ_CP116044.1	Protein Homology	CDS	2672756	2673361	.	+	0	ID=cds-WP_000765762.1;Parent=gene-PHA55_RS13015;Dbxref=Genbank:WP_000765762.1;Name=WP_000765762.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310371.1;locus_tag=PHA55_RS13015;product=glutathione transferase GstA;protein_id=WP_000765762.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2673405	2674268	.	-	.	ID=gene-PHA55_RS13020;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=PHA55_RS13020;old_locus_tag=PHA55_13015
NZ_CP116044.1	Protein Homology	CDS	2673405	2674268	.	-	0	ID=cds-WP_001307229.1;Parent=gene-PHA55_RS13020;Dbxref=Genbank:WP_001307229.1;Name=WP_001307229.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416153.1;locus_tag=PHA55_RS13020;product=pyridoxal kinase;protein_id=WP_001307229.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2674327	2675601	.	-	.	ID=gene-PHA55_RS13025;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=PHA55_RS13025;old_locus_tag=PHA55_13020
NZ_CP116044.1	Protein Homology	CDS	2674327	2675601	.	-	0	ID=cds-WP_001295400.1;Parent=gene-PHA55_RS13025;Dbxref=Genbank:WP_001295400.1;Name=WP_001295400.1;Ontology_term=GO:0006437,GO:0004831,GO:0005737;gbkey=CDS;gene=tyrS;go_component=cytoplasm|0005737||IEA;go_function=tyrosine-tRNA ligase activity|0004831||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310373.1;locus_tag=PHA55_RS13025;product=tyrosine--tRNA ligase;protein_id=WP_001295400.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2675730	2676386	.	-	.	ID=gene-PHA55_RS13030;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=PHA55_RS13030;old_locus_tag=PHA55_13025
NZ_CP116044.1	Protein Homology	CDS	2675730	2676386	.	-	0	ID=cds-WP_001282313.1;Parent=gene-PHA55_RS13030;Dbxref=Genbank:WP_001282313.1;Name=WP_001282313.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine-phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=PHA55_RS13030;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_001282313.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2676445	2676774	.	-	.	ID=gene-PHA55_RS13035;Name=mliC;gbkey=Gene;gene=mliC;gene_biotype=protein_coding;locus_tag=PHA55_RS13035;old_locus_tag=PHA55_13030
NZ_CP116044.1	Protein Homology	CDS	2676445	2676774	.	-	0	ID=cds-WP_000061968.1;Parent=gene-PHA55_RS13035;Dbxref=Genbank:WP_000061968.1;Name=WP_000061968.1;gbkey=CDS;gene=mliC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416156.4;locus_tag=PHA55_RS13035;product=C-type lysozyme inhibitor;protein_id=WP_000061968.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2676872	2677981	.	-	.	ID=gene-PHA55_RS13040;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=PHA55_RS13040;old_locus_tag=PHA55_13035
NZ_CP116044.1	Protein Homology	CDS	2676872	2677981	.	-	0	ID=cds-WP_000835092.1;Parent=gene-PHA55_RS13040;Dbxref=Genbank:WP_000835092.1;Name=WP_000835092.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416157.1;locus_tag=PHA55_RS13040;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_000835092.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2678255	2678722	.	+	.	ID=gene-PHA55_RS13045;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=PHA55_RS13045;old_locus_tag=PHA55_13040
NZ_CP116044.1	Protein Homology	CDS	2678255	2678722	.	+	0	ID=cds-WP_000597196.1;Parent=gene-PHA55_RS13045;Dbxref=Genbank:WP_000597196.1;Name=WP_000597196.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310377.1;locus_tag=PHA55_RS13045;product=outer membrane lipoprotein SlyB;protein_id=WP_000597196.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2678769	2679203	.	-	.	ID=gene-PHA55_RS13050;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=PHA55_RS13050;old_locus_tag=PHA55_13045
NZ_CP116044.1	Protein Homology	CDS	2678769	2679203	.	-	0	ID=cds-WP_053265878.1;Parent=gene-PHA55_RS13050;Dbxref=Genbank:WP_053265878.1;Name=WP_053265878.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=slyA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416159.2;locus_tag=PHA55_RS13050;product=transcriptional regulator SlyA;protein_id=WP_053265878.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2679404	2679640	.	+	.	ID=gene-PHA55_RS13055;Name=ydhI;gbkey=Gene;gene=ydhI;gene_biotype=protein_coding;locus_tag=PHA55_RS13055;old_locus_tag=PHA55_13050
NZ_CP116044.1	Protein Homology	CDS	2679404	2679640	.	+	0	ID=cds-WP_000670998.1;Parent=gene-PHA55_RS13055;Dbxref=Genbank:WP_000670998.1;Name=WP_000670998.1;gbkey=CDS;gene=ydhI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310379.1;locus_tag=PHA55_RS13055;product=DUF1656 domain-containing protein;protein_id=WP_000670998.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2679643	2680500	.	+	.	ID=gene-PHA55_RS13060;Name=ydhJ;gbkey=Gene;gene=ydhJ;gene_biotype=protein_coding;locus_tag=PHA55_RS13060;old_locus_tag=PHA55_13055
NZ_CP116044.1	Protein Homology	CDS	2679643	2680500	.	+	0	ID=cds-WP_001301002.1;Parent=gene-PHA55_RS13060;Dbxref=Genbank:WP_001301002.1;Name=WP_001301002.1;gbkey=CDS;gene=ydhJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310380.2;locus_tag=PHA55_RS13060;product=HlyD family secretion protein;protein_id=WP_001301002.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2680500	2682512	.	+	.	ID=gene-PHA55_RS13065;Name=ydhK;gbkey=Gene;gene=ydhK;gene_biotype=protein_coding;locus_tag=PHA55_RS13065;old_locus_tag=PHA55_13060
NZ_CP116044.1	Protein Homology	CDS	2680500	2682512	.	+	0	ID=cds-WP_000994280.1;Parent=gene-PHA55_RS13065;Dbxref=Genbank:WP_000994280.1;Name=WP_000994280.1;gbkey=CDS;gene=ydhK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416162.1;locus_tag=PHA55_RS13065;product=FUSC family protein;protein_id=WP_000994280.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2682513	2683034	.	-	.	ID=gene-PHA55_RS13070;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=PHA55_RS13070;old_locus_tag=PHA55_13065
NZ_CP116044.1	Protein Homology	CDS	2682513	2683034	.	-	0	ID=cds-WP_001296937.1;Parent=gene-PHA55_RS13070;Dbxref=Genbank:WP_001296937.1;Name=WP_001296937.1;Ontology_term=GO:0004784;gbkey=CDS;gene=sodC;go_function=superoxide dismutase activity|0004784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310382.1;locus_tag=PHA55_RS13070;product=superoxide dismutase [Cu-Zn] SodC;protein_id=WP_001296937.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2683115	2684011	.	-	.	ID=gene-PHA55_RS13075;Name=ydhF;gbkey=Gene;gene=ydhF;gene_biotype=protein_coding;locus_tag=PHA55_RS13075;old_locus_tag=PHA55_13070
NZ_CP116044.1	Protein Homology	CDS	2683115	2684011	.	-	0	ID=cds-WP_000250661.1;Parent=gene-PHA55_RS13075;Dbxref=Genbank:WP_000250661.1;Name=WP_000250661.1;gbkey=CDS;gene=ydhF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025305.1;locus_tag=PHA55_RS13075;product=aldo/keto reductase family oxidoreductase;protein_id=WP_000250661.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2684060	2684299	.	-	.	ID=gene-PHA55_RS13080;Name=ydhL;gbkey=Gene;gene=ydhL;gene_biotype=protein_coding;locus_tag=PHA55_RS13080;old_locus_tag=PHA55_13075
NZ_CP116044.1	Protein Homology	CDS	2684060	2684299	.	-	0	ID=cds-WP_000840481.1;Parent=gene-PHA55_RS13080;Dbxref=Genbank:WP_000840481.1;Name=WP_000840481.1;gbkey=CDS;gene=ydhL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416165.2;locus_tag=PHA55_RS13080;product=DUF1289 domain-containing protein;protein_id=WP_000840481.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2684402	2685001	.	+	.	ID=gene-PHA55_RS13085;Name=nemR;gbkey=Gene;gene=nemR;gene_biotype=protein_coding;locus_tag=PHA55_RS13085;old_locus_tag=PHA55_13080
NZ_CP116044.1	Protein Homology	CDS	2684402	2685001	.	+	0	ID=cds-WP_271287437.1;Parent=gene-PHA55_RS13085;Dbxref=Genbank:WP_271287437.1;Name=WP_271287437.1;gbkey=CDS;gene=nemR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416166.3;locus_tag=PHA55_RS13085;product=DNA-binding transcriptional regulator NemR;protein_id=WP_271287437.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2685038	2686135	.	+	.	ID=gene-PHA55_RS13090;Name=nemA;gbkey=Gene;gene=nemA;gene_biotype=protein_coding;locus_tag=PHA55_RS13090;old_locus_tag=PHA55_13085
NZ_CP116044.1	Protein Homology	CDS	2685038	2686135	.	+	0	ID=cds-WP_000093589.1;Parent=gene-PHA55_RS13090;Dbxref=Genbank:WP_000093589.1;Name=WP_000093589.1;gbkey=CDS;gene=nemA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416167.1;locus_tag=PHA55_RS13090;product=N-ethylmaleimide reductase;protein_id=WP_000093589.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2686216	2686623	.	+	.	ID=gene-PHA55_RS13095;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=PHA55_RS13095;old_locus_tag=PHA55_13090
NZ_CP116044.1	Protein Homology	CDS	2686216	2686623	.	+	0	ID=cds-WP_001237796.1;Parent=gene-PHA55_RS13095;Dbxref=Genbank:WP_001237796.1;Name=WP_001237796.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=PHA55_RS13095;product=lactoylglutathione lyase;protein_id=WP_001237796.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2686726	2687373	.	+	.	ID=gene-PHA55_RS13100;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=PHA55_RS13100;old_locus_tag=PHA55_13095
NZ_CP116044.1	Protein Homology	CDS	2686726	2687373	.	+	0	ID=cds-WP_001282281.1;Parent=gene-PHA55_RS13100;Dbxref=Genbank:WP_001282281.1;Name=WP_001282281.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=exoribonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310388.1;locus_tag=PHA55_RS13100;product=ribonuclease T;protein_id=WP_001282281.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2687466	2692082	.	+	.	ID=gene-PHA55_RS13105;Name=lhr;gbkey=Gene;gene=lhr;gene_biotype=protein_coding;locus_tag=PHA55_RS13105;old_locus_tag=PHA55_13100
NZ_CP116044.1	Protein Homology	CDS	2687466	2692082	.	+	0	ID=cds-WP_001352416.1;Parent=gene-PHA55_RS13105;Dbxref=Genbank:WP_001352416.1;Name=WP_001352416.1;Ontology_term=GO:0003676,GO:0005524,GO:0016818;gbkey=CDS;gene=lhr;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416170.1;locus_tag=PHA55_RS13105;product=ATP-dependent helicase;protein_id=WP_001352416.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2692133	2692480	.	-	.	ID=gene-PHA55_RS13110;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=PHA55_RS13110;old_locus_tag=PHA55_13105
NZ_CP116044.1	Protein Homology	CDS	2692133	2692480	.	-	0	ID=cds-WP_000108172.1;Parent=gene-PHA55_RS13110;Dbxref=Genbank:WP_000108172.1;Name=WP_000108172.1;gbkey=CDS;gene=grxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310390.1;locus_tag=PHA55_RS13110;product=monothiol glutaredoxin 4;protein_id=WP_000108172.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2692814	2693629	.	+	.	ID=gene-PHA55_RS13115;Name=mepH;gbkey=Gene;gene=mepH;gene_biotype=protein_coding;locus_tag=PHA55_RS13115;old_locus_tag=PHA55_13110
NZ_CP116044.1	Protein Homology	CDS	2692814	2693629	.	+	0	ID=cds-WP_000101193.1;Parent=gene-PHA55_RS13115;Dbxref=Genbank:WP_000101193.1;Name=WP_000101193.1;gbkey=CDS;gene=mepH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416172.1;locus_tag=PHA55_RS13115;product=peptidoglycan DD-endopeptidase MepH;protein_id=WP_000101193.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2693757	2694338	.	+	.	ID=gene-PHA55_RS13120;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=PHA55_RS13120;old_locus_tag=PHA55_13115
NZ_CP116044.1	Protein Homology	CDS	2693757	2694338	.	+	0	ID=cds-WP_000007283.1;Parent=gene-PHA55_RS13120;Dbxref=Genbank:WP_000007283.1;Name=WP_000007283.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodB;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310392.1;locus_tag=PHA55_RS13120;product=superoxide dismutase [Fe];protein_id=WP_000007283.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2694484	2695653	.	-	.	ID=gene-PHA55_RS13125;Name=ydhP;gbkey=Gene;gene=ydhP;gene_biotype=protein_coding;locus_tag=PHA55_RS13125;old_locus_tag=PHA55_13120
NZ_CP116044.1	Protein Homology	CDS	2694484	2695653	.	-	0	ID=cds-WP_000701040.1;Parent=gene-PHA55_RS13125;Dbxref=Genbank:WP_000701040.1;Name=WP_000701040.1;gbkey=CDS;gene=ydhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416174.1;locus_tag=PHA55_RS13125;product=MFS transporter;protein_id=WP_000701040.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2695819	2695908	.	-	.	ID=gene-PHA55_RS13130;Name=cydH;gbkey=Gene;gene=cydH;gene_biotype=protein_coding;gene_synonym=ynhF;locus_tag=PHA55_RS13130;old_locus_tag=PHA55_13125
NZ_CP116044.1	Protein Homology	CDS	2695819	2695908	.	-	0	ID=cds-WP_000102278.1;Parent=gene-PHA55_RS13130;Dbxref=Genbank:WP_000102278.1;Name=WP_000102278.1;gbkey=CDS;gene=cydH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165321.1;locus_tag=PHA55_RS13130;product=cytochrome bd-I accessory subunit CydH;protein_id=WP_000102278.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2696207	2697232	.	+	.	ID=gene-PHA55_RS13135;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=PHA55_RS13135;old_locus_tag=PHA55_13130
NZ_CP116044.1	Protein Homology	CDS	2696207	2697232	.	+	0	ID=cds-WP_000190982.1;Parent=gene-PHA55_RS13135;Dbxref=Genbank:WP_000190982.1;Name=WP_000190982.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=PHA55_RS13135;product=HTH-type transcriptional repressor PurR;protein_id=WP_000190982.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2697229	2698161	.	-	.	ID=gene-PHA55_RS13140;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=PHA55_RS13140;old_locus_tag=PHA55_13135
NZ_CP116044.1	Protein Homology	CDS	2697229	2698161	.	-	0	ID=cds-WP_000269501.1;Parent=gene-PHA55_RS13140;Dbxref=Genbank:WP_000269501.1;Name=WP_000269501.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310395.1;locus_tag=PHA55_RS13140;product=DNA-binding transcriptional activator PunR;protein_id=WP_000269501.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2698274	2699485	.	+	.	ID=gene-PHA55_RS13145;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;locus_tag=PHA55_RS13145;old_locus_tag=PHA55_13140
NZ_CP116044.1	Protein Homology	CDS	2698274	2699485	.	+	0	ID=cds-WP_001182363.1;Parent=gene-PHA55_RS13145;Dbxref=Genbank:WP_001182363.1;Name=WP_001182363.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310396.1;locus_tag=PHA55_RS13145;product=purine nucleoside transporter PunC;protein_id=WP_001182363.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2699776	2700924	.	+	.	ID=gene-PHA55_RS13150;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=PHA55_RS13150;old_locus_tag=PHA55_13145
NZ_CP116044.1	Protein Homology	CDS	2699776	2700924	.	+	0	ID=cds-WP_000098913.1;Parent=gene-PHA55_RS13150;Dbxref=Genbank:WP_000098913.1;Name=WP_000098913.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416178.1;locus_tag=PHA55_RS13150;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_000098913.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2700964	2701605	.	-	.	ID=gene-PHA55_RS13155;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=PHA55_RS13155;old_locus_tag=PHA55_13150
NZ_CP116044.1	Protein Homology	CDS	2700964	2701605	.	-	0	ID=cds-WP_000493947.1;Parent=gene-PHA55_RS13155;Dbxref=Genbank:WP_000493947.1;Name=WP_000493947.1;Ontology_term=GO:0004746;gbkey=CDS;gene=ribE;go_function=riboflavin synthase activity|0004746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416179.1;locus_tag=PHA55_RS13155;product=riboflavin synthase;protein_id=WP_000493947.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2701820	2703193	.	+	.	ID=gene-PHA55_RS13160;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=protein_coding;locus_tag=PHA55_RS13160;old_locus_tag=PHA55_13155
NZ_CP116044.1	Protein Homology	CDS	2701820	2703193	.	+	0	ID=cds-WP_001174943.1;Parent=gene-PHA55_RS13160;Dbxref=Genbank:WP_001174943.1;Name=WP_001174943.1;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025307.1;locus_tag=PHA55_RS13160;product=multidrug efflux MATE transporter MdtK;protein_id=WP_001174943.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2703234	2704490	.	-	.	ID=gene-PHA55_RS13165;Name=ydhQ;gbkey=Gene;gene=ydhQ;gene_biotype=protein_coding;locus_tag=PHA55_RS13165;old_locus_tag=PHA55_13160
NZ_CP116044.1	Protein Homology	CDS	2703234	2704490	.	-	0	ID=cds-WP_042099516.1;Parent=gene-PHA55_RS13165;Dbxref=Genbank:WP_042099516.1;Name=WP_042099516.1;gbkey=CDS;gene=ydhQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416181.1;locus_tag=PHA55_RS13165;product=AIDA repeat-containing protein;protein_id=WP_042099516.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2704798	2704874	.	+	.	ID=gene-PHA55_RS13170;Name=PHA55_RS13170;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS13170;old_locus_tag=PHA55_13165
NZ_CP116044.1	tRNAscan-SE	tRNA	2704798	2704874	.	+	.	ID=rna-PHA55_RS13170;Parent=gene-PHA55_RS13170;anticodon=(pos:2704832..2704834);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS13170;product=tRNA-Val
NZ_CP116044.1	tRNAscan-SE	exon	2704798	2704874	.	+	.	ID=exon-PHA55_RS13170-1;Parent=rna-PHA55_RS13170;anticodon=(pos:2704832..2704834);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS13170;product=tRNA-Val
NZ_CP116044.1	RefSeq	gene	2704879	2704955	.	+	.	ID=gene-PHA55_RS13175;Name=PHA55_RS13175;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS13175;old_locus_tag=PHA55_13170
NZ_CP116044.1	tRNAscan-SE	tRNA	2704879	2704955	.	+	.	ID=rna-PHA55_RS13175;Parent=gene-PHA55_RS13175;anticodon=(pos:2704913..2704915);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS13175;product=tRNA-Val
NZ_CP116044.1	tRNAscan-SE	exon	2704879	2704955	.	+	.	ID=exon-PHA55_RS13175-1;Parent=rna-PHA55_RS13175;anticodon=(pos:2704913..2704915);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS13175;product=tRNA-Val
NZ_CP116044.1	RefSeq	gene	2705063	2705368	.	+	.	ID=gene-PHA55_RS13180;Name=ydhR;gbkey=Gene;gene=ydhR;gene_biotype=protein_coding;locus_tag=PHA55_RS13180;old_locus_tag=PHA55_13175
NZ_CP116044.1	Protein Homology	CDS	2705063	2705368	.	+	0	ID=cds-WP_000212657.1;Parent=gene-PHA55_RS13180;Dbxref=Genbank:WP_000212657.1;Name=WP_000212657.1;gbkey=CDS;gene=ydhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416182.1;locus_tag=PHA55_RS13180;product=monooxygenase;protein_id=WP_000212657.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2705494	2707098	.	+	.	ID=gene-PHA55_RS13185;Name=ydhS;gbkey=Gene;gene=ydhS;gene_biotype=protein_coding;locus_tag=PHA55_RS13185;old_locus_tag=PHA55_13180
NZ_CP116044.1	Protein Homology	CDS	2705494	2707098	.	+	0	ID=cds-WP_000716922.1;Parent=gene-PHA55_RS13185;Dbxref=Genbank:WP_000716922.1;Name=WP_000716922.1;gbkey=CDS;gene=ydhS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416183.1;locus_tag=PHA55_RS13185;product=FAD-NAD(P)-binding protein;protein_id=WP_000716922.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2707110	2707922	.	-	.	ID=gene-PHA55_RS13190;Name=ydhT;gbkey=Gene;gene=ydhT;gene_biotype=protein_coding;locus_tag=PHA55_RS13190;old_locus_tag=PHA55_13185
NZ_CP116044.1	Protein Homology	CDS	2707110	2707922	.	-	0	ID=cds-WP_000587552.1;Parent=gene-PHA55_RS13190;Dbxref=Genbank:WP_000587552.1;Name=WP_000587552.1;gbkey=CDS;gene=ydhT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707567.1;locus_tag=PHA55_RS13190;product=protein YdhT;protein_id=WP_000587552.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2707926	2708711	.	-	.	ID=gene-PHA55_RS13195;Name=ydhU;gbkey=Gene;gene=ydhU;gene_biotype=protein_coding;locus_tag=PHA55_RS13195;old_locus_tag=PHA55_13190
NZ_CP116044.1	Protein Homology	CDS	2707926	2708711	.	-	0	ID=cds-WP_001088967.1;Parent=gene-PHA55_RS13195;Dbxref=Genbank:WP_001088967.1;Name=WP_001088967.1;gbkey=CDS;gene=ydhU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707568.1;locus_tag=PHA55_RS13195;product=thiosulfate reductase cytochrome B subunit;protein_id=WP_001088967.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2708708	2709376	.	-	.	ID=gene-PHA55_RS13200;Name=ydhX;gbkey=Gene;gene=ydhX;gene_biotype=protein_coding;locus_tag=PHA55_RS13200;old_locus_tag=PHA55_13195
NZ_CP116044.1	Protein Homology	CDS	2708708	2709376	.	-	0	ID=cds-WP_001349911.1;Parent=gene-PHA55_RS13200;Dbxref=Genbank:WP_001349911.1;Name=WP_001349911.1;gbkey=CDS;gene=ydhX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416186.4;locus_tag=PHA55_RS13200;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001349911.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2709440	2710078	.	-	.	ID=gene-PHA55_RS13205;Name=ydhW;gbkey=Gene;gene=ydhW;gene_biotype=protein_coding;locus_tag=PHA55_RS13205;old_locus_tag=PHA55_13200
NZ_CP116044.1	Protein Homology	CDS	2709440	2710078	.	-	0	ID=cds-WP_001297805.1;Parent=gene-PHA55_RS13205;Dbxref=Genbank:WP_001297805.1;Name=WP_001297805.1;gbkey=CDS;gene=ydhW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707570.2;locus_tag=PHA55_RS13205;product=YdhW family putative oxidoreductase system protein;protein_id=WP_001297805.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2710091	2712277	.	-	.	ID=gene-PHA55_RS13210;Name=ydhV;gbkey=Gene;gene=ydhV;gene_biotype=protein_coding;locus_tag=PHA55_RS13210;old_locus_tag=PHA55_13205
NZ_CP116044.1	Protein Homology	CDS	2710091	2712277	.	-	0	ID=cds-WP_001317116.1;Parent=gene-PHA55_RS13210;Dbxref=Genbank:WP_001317116.1;Name=WP_001317116.1;Ontology_term=GO:0009055,GO:0016491,GO:0051536;gbkey=CDS;gene=ydhV;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009008121.1;locus_tag=PHA55_RS13210;product=aldehyde ferredoxin oxidoreductase;protein_id=WP_001317116.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2712214	2712840	.	-	.	ID=gene-PHA55_RS13215;Name=ydhY;gbkey=Gene;gene=ydhY;gene_biotype=protein_coding;locus_tag=PHA55_RS13215;old_locus_tag=PHA55_13210
NZ_CP116044.1	Protein Homology	CDS	2712214	2712840	.	-	0	ID=cds-WP_001070230.1;Parent=gene-PHA55_RS13215;Dbxref=Genbank:WP_001070230.1;Name=WP_001070230.1;gbkey=CDS;gene=ydhY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310408.1;locus_tag=PHA55_RS13215;product=ferredoxin-like protein;protein_id=WP_001070230.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2713296	2713505	.	-	.	ID=gene-PHA55_RS13220;Name=fumD;gbkey=Gene;gene=fumD;gene_biotype=protein_coding;locus_tag=PHA55_RS13220;old_locus_tag=PHA55_13215
NZ_CP116044.1	Protein Homology	CDS	2713296	2713505	.	-	0	ID=cds-WP_000528342.1;Parent=gene-PHA55_RS13220;Dbxref=Genbank:WP_000528342.1;Name=WP_000528342.1;gbkey=CDS;gene=fumD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310409.1;locus_tag=PHA55_RS13220;product=fumarate hydratase FumD;protein_id=WP_000528342.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2713860	2714054	.	+	.	ID=gene-PHA55_RS13225;Name=PHA55_RS13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS13225;old_locus_tag=PHA55_13220
NZ_CP116044.1	Protein Homology	CDS	2713860	2714054	.	+	0	ID=cds-WP_240806354.1;Parent=gene-PHA55_RS13225;Dbxref=Genbank:WP_240806354.1;Name=WP_240806354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010283910.1;locus_tag=PHA55_RS13225;product=protein YnhH;protein_id=WP_240806354.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2714062	2715474	.	+	.	ID=gene-PHA55_RS13230;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=PHA55_RS13230;old_locus_tag=PHA55_13225
NZ_CP116044.1	Protein Homology	CDS	2714062	2715474	.	+	0	ID=cds-WP_042099515.1;Parent=gene-PHA55_RS13230;Dbxref=Genbank:WP_042099515.1;Name=WP_042099515.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=PHA55_RS13230;product=pyruvate kinase PykF;protein_id=WP_042099515.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2715785	2716021	.	+	.	ID=gene-PHA55_RS13235;Name=lpp;gbkey=Gene;gene=lpp;gene_biotype=protein_coding;locus_tag=PHA55_RS13235;old_locus_tag=PHA55_13230
NZ_CP116044.1	Protein Homology	CDS	2715785	2716021	.	+	0	ID=cds-WP_000648420.1;Parent=gene-PHA55_RS13235;Dbxref=Genbank:WP_000648420.1;Name=WP_000648420.1;gbkey=CDS;gene=lpp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310411.1;locus_tag=PHA55_RS13235;product=murein lipoprotein Lpp;protein_id=WP_000648420.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2716085	2717089	.	-	.	ID=gene-PHA55_RS13240;Name=ldtE;gbkey=Gene;gene=ldtE;gene_biotype=protein_coding;locus_tag=PHA55_RS13240;old_locus_tag=PHA55_13235
NZ_CP116044.1	Protein Homology	CDS	2716085	2717089	.	-	0	ID=cds-WP_000817104.1;Parent=gene-PHA55_RS13240;Dbxref=Genbank:WP_000817104.1;Name=WP_000817104.1;gbkey=CDS;gene=ldtE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707577.1;locus_tag=PHA55_RS13240;product=L%2CD-transpeptidase LdtE;protein_id=WP_000817104.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2717238	2717654	.	-	.	ID=gene-PHA55_RS13245;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=PHA55_RS13245;old_locus_tag=PHA55_13240
NZ_CP116044.1	Protein Homology	CDS	2717238	2717654	.	-	0	ID=cds-WP_001196517.1;Parent=gene-PHA55_RS13245;Dbxref=Genbank:WP_001196517.1;Name=WP_001196517.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416194.1;locus_tag=PHA55_RS13245;product=cysteine desulfuration protein SufE;protein_id=WP_001196517.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2717667	2718887	.	-	.	ID=gene-PHA55_RS13250;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=PHA55_RS13250;old_locus_tag=PHA55_13245
NZ_CP116044.1	Protein Homology	CDS	2717667	2718887	.	-	0	ID=cds-WP_271287438.1;Parent=gene-PHA55_RS13250;Dbxref=Genbank:WP_271287438.1;Name=WP_271287438.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310414.1;locus_tag=PHA55_RS13250;product=cysteine desulfurase SufS;protein_id=WP_271287438.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2718884	2720155	.	-	.	ID=gene-PHA55_RS13255;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=PHA55_RS13255;old_locus_tag=PHA55_13250
NZ_CP116044.1	Protein Homology	CDS	2718884	2720155	.	-	0	ID=cds-WP_000908012.1;Parent=gene-PHA55_RS13255;Dbxref=Genbank:WP_000908012.1;Name=WP_000908012.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707580.1;locus_tag=PHA55_RS13255;product=Fe-S cluster assembly protein SufD;protein_id=WP_000908012.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2720130	2720876	.	-	.	ID=gene-PHA55_RS13260;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=PHA55_RS13260;old_locus_tag=PHA55_13255
NZ_CP116044.1	Protein Homology	CDS	2720130	2720876	.	-	0	ID=cds-WP_000948855.1;Parent=gene-PHA55_RS13260;Dbxref=Genbank:WP_000948855.1;Name=WP_000948855.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=PHA55_RS13260;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_000948855.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2720886	2722373	.	-	.	ID=gene-PHA55_RS13265;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=PHA55_RS13265;old_locus_tag=PHA55_13260
NZ_CP116044.1	Protein Homology	CDS	2720886	2722373	.	-	0	ID=cds-WP_001297388.1;Parent=gene-PHA55_RS13265;Dbxref=Genbank:WP_001297388.1;Name=WP_001297388.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416198.2;locus_tag=PHA55_RS13265;product=Fe-S cluster assembly protein SufB;protein_id=WP_001297388.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2722382	2722750	.	-	.	ID=gene-PHA55_RS13270;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=PHA55_RS13270;old_locus_tag=PHA55_13265
NZ_CP116044.1	Protein Homology	CDS	2722382	2722750	.	-	0	ID=cds-WP_000367160.1;Parent=gene-PHA55_RS13270;Dbxref=Genbank:WP_000367160.1;Name=WP_000367160.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416199.1;locus_tag=PHA55_RS13270;product=Fe-S cluster assembly scaffold SufA;protein_id=WP_000367160.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2723298	2723486	.	-	.	ID=gene-PHA55_RS13275;Name=ydiH;gbkey=Gene;gene=ydiH;gene_biotype=protein_coding;locus_tag=PHA55_RS13275;old_locus_tag=PHA55_13270
NZ_CP116044.1	Protein Homology	CDS	2723298	2723486	.	-	0	ID=cds-WP_001296104.1;Parent=gene-PHA55_RS13275;Dbxref=Genbank:WP_001296104.1;Name=WP_001296104.1;gbkey=CDS;gene=ydiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416200.2;locus_tag=PHA55_RS13275;product=YdiH family protein;protein_id=WP_001296104.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2723586	2723996	.	-	.	ID=gene-PHA55_RS13280;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=PHA55_RS13280;old_locus_tag=PHA55_13275
NZ_CP116044.1	Protein Homology	CDS	2723586	2723996	.	-	0	ID=cds-WP_000637982.1;Parent=gene-PHA55_RS13280;Dbxref=Genbank:WP_000637982.1;Name=WP_000637982.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416201.1;locus_tag=PHA55_RS13280;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=WP_000637982.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2723993	2727049	.	-	.	ID=gene-PHA55_RS13285;Name=ydiJ;gbkey=Gene;gene=ydiJ;gene_biotype=protein_coding;locus_tag=PHA55_RS13285;old_locus_tag=PHA55_13280
NZ_CP116044.1	Protein Homology	CDS	2723993	2727049	.	-	0	ID=cds-WP_000612968.1;Parent=gene-PHA55_RS13285;Dbxref=Genbank:WP_000612968.1;Name=WP_000612968.1;gbkey=CDS;gene=ydiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310421.1;locus_tag=PHA55_RS13285;product=FAD-binding and (Fe-S)-binding domain-containing protein;protein_id=WP_000612968.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2727438	2728550	.	+	.	ID=gene-PHA55_RS13290;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=PHA55_RS13290;old_locus_tag=PHA55_13285
NZ_CP116044.1	Protein Homology	CDS	2727438	2728550	.	+	0	ID=cds-WP_000248636.1;Parent=gene-PHA55_RS13290;Dbxref=Genbank:WP_000248636.1;Name=WP_000248636.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416203.1;locus_tag=PHA55_RS13290;product=AI-2E family transporter YdiK;protein_id=WP_000248636.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2728736	2728843	.	+	.	ID=gene-PHA55_RS13295;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=PHA55_RS13295;old_locus_tag=PHA55_13290
NZ_CP116044.1	cmsearch	antisense_RNA	2728736	2728843	.	+	.	ID=rna-PHA55_RS13295;Parent=gene-PHA55_RS13295;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS13295;product=antisense sRNA RprA
NZ_CP116044.1	cmsearch	exon	2728736	2728843	.	+	.	ID=exon-PHA55_RS13295-1;Parent=rna-PHA55_RS13295;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS13295;product=antisense sRNA RprA
NZ_CP116044.1	RefSeq	gene	2728979	2729335	.	+	.	ID=gene-PHA55_RS13300;Name=ydiL;gbkey=Gene;gene=ydiL;gene_biotype=protein_coding;locus_tag=PHA55_RS13300;old_locus_tag=PHA55_13295
NZ_CP116044.1	Protein Homology	CDS	2728979	2729335	.	+	0	ID=cds-WP_001299124.1;Parent=gene-PHA55_RS13300;Dbxref=Genbank:WP_001299124.1;Name=WP_001299124.1;gbkey=CDS;gene=ydiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707588.2;locus_tag=PHA55_RS13300;product=YdiL family protein;protein_id=WP_001299124.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2729435	2730649	.	+	.	ID=gene-PHA55_RS13305;Name=ydiM;gbkey=Gene;gene=ydiM;gene_biotype=protein_coding;locus_tag=PHA55_RS13305;old_locus_tag=PHA55_13300
NZ_CP116044.1	Protein Homology	CDS	2729435	2730649	.	+	0	ID=cds-WP_032197112.1;Parent=gene-PHA55_RS13305;Dbxref=Genbank:WP_032197112.1;Name=WP_032197112.1;gbkey=CDS;gene=ydiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310424.1;locus_tag=PHA55_RS13305;product=MFS transporter;protein_id=WP_032197112.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2730876	2732141	.	+	.	ID=gene-PHA55_RS13310;Name=ydiN;gbkey=Gene;gene=ydiN;gene_biotype=protein_coding;locus_tag=PHA55_RS13310;old_locus_tag=PHA55_13305
NZ_CP116044.1	Protein Homology	CDS	2730876	2732141	.	+	0	ID=cds-WP_001297389.1;Parent=gene-PHA55_RS13310;Dbxref=Genbank:WP_001297389.1;Name=WP_001297389.1;gbkey=CDS;gene=ydiN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310425.2;locus_tag=PHA55_RS13310;product=MFS transporter;protein_id=WP_001297389.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2732153	2733019	.	+	.	ID=gene-PHA55_RS13315;Name=ydiB;gbkey=Gene;gene=ydiB;gene_biotype=protein_coding;locus_tag=PHA55_RS13315;old_locus_tag=PHA55_13310
NZ_CP116044.1	Protein Homology	CDS	2732153	2733019	.	+	0	ID=cds-WP_000383460.1;Parent=gene-PHA55_RS13315;Dbxref=Genbank:WP_000383460.1;Name=WP_000383460.1;gbkey=CDS;gene=ydiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416207.1;locus_tag=PHA55_RS13315;product=quinate/shikimate dehydrogenase;protein_id=WP_000383460.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2733050	2733808	.	+	.	ID=gene-PHA55_RS13320;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=PHA55_RS13320;old_locus_tag=PHA55_13315
NZ_CP116044.1	Protein Homology	CDS	2733050	2733808	.	+	0	ID=cds-WP_000860182.1;Parent=gene-PHA55_RS13320;Dbxref=Genbank:WP_000860182.1;Name=WP_000860182.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310427.1;locus_tag=PHA55_RS13320;product=type I 3-dehydroquinate dehydratase;protein_id=WP_000860182.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2733952	2735547	.	+	.	ID=gene-PHA55_RS13325;Name=ydiF;gbkey=Gene;gene=ydiF;gene_biotype=protein_coding;locus_tag=PHA55_RS13325;old_locus_tag=PHA55_13320
NZ_CP116044.1	Protein Homology	CDS	2733952	2735547	.	+	0	ID=cds-WP_000805691.1;Parent=gene-PHA55_RS13325;Dbxref=Genbank:WP_000805691.1;Name=WP_000805691.1;gbkey=CDS;gene=ydiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310428.1;locus_tag=PHA55_RS13325;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=WP_000805691.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2735561	2736712	.	+	.	ID=gene-PHA55_RS13330;Name=ydiO;gbkey=Gene;gene=ydiO;gene_biotype=protein_coding;locus_tag=PHA55_RS13330;old_locus_tag=PHA55_13325
NZ_CP116044.1	Protein Homology	CDS	2735561	2736712	.	+	0	ID=cds-WP_000347850.1;Parent=gene-PHA55_RS13330;Dbxref=Genbank:WP_000347850.1;Name=WP_000347850.1;gbkey=CDS;gene=ydiO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310429.2;locus_tag=PHA55_RS13330;product=acyl-CoA dehydrogenase;protein_id=WP_000347850.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2736755	2737666	.	-	.	ID=gene-PHA55_RS13335;Name=ydiP;gbkey=Gene;gene=ydiP;gene_biotype=protein_coding;locus_tag=PHA55_RS13335;old_locus_tag=PHA55_13330
NZ_CP116044.1	Protein Homology	CDS	2736755	2737666	.	-	0	ID=cds-WP_000284798.1;Parent=gene-PHA55_RS13335;Dbxref=Genbank:WP_000284798.1;Name=WP_000284798.1;gbkey=CDS;gene=ydiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310430.1;locus_tag=PHA55_RS13335;product=AraC family transcriptional regulator;protein_id=WP_000284798.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2737982	2738746	.	+	.	ID=gene-PHA55_RS13340;Name=ydiQ;gbkey=Gene;gene=ydiQ;gene_biotype=protein_coding;locus_tag=PHA55_RS13340;old_locus_tag=PHA55_13335
NZ_CP116044.1	Protein Homology	CDS	2737982	2738746	.	+	0	ID=cds-WP_000692148.1;Parent=gene-PHA55_RS13340;Dbxref=Genbank:WP_000692148.1;Name=WP_000692148.1;gbkey=CDS;gene=ydiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416212.1;locus_tag=PHA55_RS13340;product=electron transfer flavoprotein;protein_id=WP_000692148.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2738766	2739704	.	+	.	ID=gene-PHA55_RS13345;Name=ydiR;gbkey=Gene;gene=ydiR;gene_biotype=protein_coding;locus_tag=PHA55_RS13345;old_locus_tag=PHA55_13340
NZ_CP116044.1	Protein Homology	CDS	2738766	2739704	.	+	0	ID=cds-WP_000080700.1;Parent=gene-PHA55_RS13345;Dbxref=Genbank:WP_000080700.1;Name=WP_000080700.1;gbkey=CDS;gene=ydiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310432.1;locus_tag=PHA55_RS13345;product=electron transfer flavoprotein subunit alpha;protein_id=WP_000080700.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2739760	2741049	.	+	.	ID=gene-PHA55_RS13350;Name=ydiS;gbkey=Gene;gene=ydiS;gene_biotype=protein_coding;locus_tag=PHA55_RS13350;old_locus_tag=PHA55_13345
NZ_CP116044.1	Protein Homology	CDS	2739760	2741049	.	+	0	ID=cds-WP_001287819.1;Parent=gene-PHA55_RS13350;Dbxref=Genbank:WP_001287819.1;Name=WP_001287819.1;gbkey=CDS;gene=ydiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416214.1;locus_tag=PHA55_RS13350;product=FAD-dependent oxidoreductase;protein_id=WP_001287819.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2741046	2741339	.	+	.	ID=gene-PHA55_RS13355;Name=ydiT;gbkey=Gene;gene=ydiT;gene_biotype=protein_coding;locus_tag=PHA55_RS13355;old_locus_tag=PHA55_13350
NZ_CP116044.1	Protein Homology	CDS	2741046	2741339	.	+	0	ID=cds-WP_000081071.1;Parent=gene-PHA55_RS13355;Dbxref=Genbank:WP_000081071.1;Name=WP_000081071.1;gbkey=CDS;gene=ydiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310434.1;locus_tag=PHA55_RS13355;product=ferredoxin family protein;protein_id=WP_000081071.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2741396	2743042	.	+	.	ID=gene-PHA55_RS13360;Name=fadK;gbkey=Gene;gene=fadK;gene_biotype=protein_coding;locus_tag=PHA55_RS13360;old_locus_tag=PHA55_13355
NZ_CP116044.1	Protein Homology	CDS	2741396	2743042	.	+	0	ID=cds-WP_001356268.1;Parent=gene-PHA55_RS13360;Dbxref=Genbank:WP_001356268.1;Name=WP_001356268.1;gbkey=CDS;gene=fadK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310435.2;locus_tag=PHA55_RS13360;product=medium-chain fatty-acid--CoA ligase;protein_id=WP_001356268.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2743099	2745477	.	-	.	ID=gene-PHA55_RS13365;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=PHA55_RS13365;old_locus_tag=PHA55_13360
NZ_CP116044.1	Protein Homology	CDS	2743099	2745477	.	-	0	ID=cds-WP_000069375.1;Parent=gene-PHA55_RS13365;Dbxref=Genbank:WP_000069375.1;Name=WP_000069375.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416217.1;locus_tag=PHA55_RS13365;product=phosphoenolpyruvate synthase;protein_id=WP_000069375.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2745810	2746643	.	+	.	ID=gene-PHA55_RS13370;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=PHA55_RS13370;old_locus_tag=PHA55_13365
NZ_CP116044.1	Protein Homology	CDS	2745810	2746643	.	+	0	ID=cds-WP_000368046.1;Parent=gene-PHA55_RS13370;Dbxref=Genbank:WP_000368046.1;Name=WP_000368046.1;gbkey=CDS;gene=ppsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310437.1;locus_tag=PHA55_RS13370;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=WP_000368046.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2746800	2747846	.	+	.	ID=gene-PHA55_RS13375;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=PHA55_RS13375;old_locus_tag=PHA55_13370
NZ_CP116044.1	Protein Homology	CDS	2746800	2747846	.	+	0	ID=cds-WP_001082226.1;Parent=gene-PHA55_RS13375;Dbxref=Genbank:WP_001082226.1;Name=WP_001082226.1;gbkey=CDS;gene=aroH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310438.1;locus_tag=PHA55_RS13375;product=3-deoxy-7-phosphoheptulonate synthase AroH;protein_id=WP_001082226.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2747978	2748169	.	+	.	ID=gene-PHA55_RS13380;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=PHA55_RS13380;old_locus_tag=PHA55_13375
NZ_CP116044.1	Protein Homology	CDS	2747978	2748169	.	+	0	ID=cds-WP_001270809.1;Parent=gene-PHA55_RS13380;Dbxref=Genbank:WP_001270809.1;Name=WP_001270809.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310439.1;locus_tag=PHA55_RS13380;product=hemin uptake protein HemP;protein_id=WP_001270809.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2748173	2749609	.	-	.	ID=gene-PHA55_RS13385;Name=selO;gbkey=Gene;gene=selO;gene_biotype=protein_coding;locus_tag=PHA55_RS13385;old_locus_tag=PHA55_13380
NZ_CP116044.1	Protein Homology	CDS	2748173	2749609	.	-	0	ID=cds-WP_021542137.1;Parent=gene-PHA55_RS13385;Dbxref=Genbank:WP_021542137.1;Name=WP_021542137.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;gene=selO;go_function=ATP binding|0005524||IEA,protein adenylyltransferase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707408.1;locus_tag=PHA55_RS13385;product=protein adenylyltransferase SelO;protein_id=WP_021542137.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2749672	2750385	.	-	.	ID=gene-PHA55_RS13390;Name=ydiV;gbkey=Gene;gene=ydiV;gene_biotype=protein_coding;locus_tag=PHA55_RS13390;old_locus_tag=PHA55_13385
NZ_CP116044.1	Protein Homology	CDS	2749672	2750385	.	-	0	ID=cds-WP_001299130.1;Parent=gene-PHA55_RS13390;Dbxref=Genbank:WP_001299130.1;Name=WP_001299130.1;gbkey=CDS;gene=ydiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416222.1;locus_tag=PHA55_RS13390;product=anti-FlhDC factor;protein_id=WP_001299130.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2750632	2751096	.	-	.	ID=gene-PHA55_RS13395;Name=nlpC;gbkey=Gene;gene=nlpC;gene_biotype=protein_coding;locus_tag=PHA55_RS13395;old_locus_tag=PHA55_13390
NZ_CP116044.1	Protein Homology	CDS	2750632	2751096	.	-	0	ID=cds-WP_001209780.1;Parent=gene-PHA55_RS13395;Dbxref=Genbank:WP_001209780.1;Name=WP_001209780.1;gbkey=CDS;gene=nlpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310442.1;locus_tag=PHA55_RS13395;product=NlpC/P60 family protein;protein_id=WP_001209780.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2751174	2751923	.	-	.	ID=gene-PHA55_RS13400;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=PHA55_RS13400;old_locus_tag=PHA55_13395
NZ_CP116044.1	Protein Homology	CDS	2751174	2751923	.	-	0	ID=cds-WP_000029466.1;Parent=gene-PHA55_RS13400;Dbxref=Genbank:WP_000029466.1;Name=WP_000029466.1;Ontology_term=GO:0015889,GO:0005524;gbkey=CDS;gene=btuD;go_function=ATP binding|0005524||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707405.1;locus_tag=PHA55_RS13400;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WP_000029466.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2751923	2752474	.	-	.	ID=gene-PHA55_RS13405;Name=btuE;gbkey=Gene;gene=btuE;gene_biotype=protein_coding;locus_tag=PHA55_RS13405;old_locus_tag=PHA55_13400
NZ_CP116044.1	Protein Homology	CDS	2751923	2752474	.	-	0	ID=cds-WP_042099511.1;Parent=gene-PHA55_RS13405;Dbxref=Genbank:WP_042099511.1;Name=WP_042099511.1;gbkey=CDS;gene=btuE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310444.1;locus_tag=PHA55_RS13405;product=bifunctional thioredoxin/glutathione peroxidase;protein_id=WP_042099511.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2752537	2753517	.	-	.	ID=gene-PHA55_RS13410;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=PHA55_RS13410;old_locus_tag=PHA55_13405
NZ_CP116044.1	Protein Homology	CDS	2752537	2753517	.	-	0	ID=cds-WP_271287439.1;Parent=gene-PHA55_RS13410;Dbxref=Genbank:WP_271287439.1;Name=WP_271287439.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416226.1;locus_tag=PHA55_RS13410;product=vitamin B12 ABC transporter permease BtuC;protein_id=WP_271287439.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2753618	2753917	.	-	.	ID=gene-PHA55_RS13415;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=PHA55_RS13415;old_locus_tag=PHA55_13410
NZ_CP116044.1	Protein Homology	CDS	2753618	2753917	.	-	0	ID=cds-WP_001229265.1;Parent=gene-PHA55_RS13415;Dbxref=Genbank:WP_001229265.1;Name=WP_001229265.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310446.1;locus_tag=PHA55_RS13415;product=integration host factor subunit alpha;protein_id=WP_001229265.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2753922	2756309	.	-	.	ID=gene-PHA55_RS13420;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=PHA55_RS13420;old_locus_tag=PHA55_13415
NZ_CP116044.1	Protein Homology	CDS	2753922	2756309	.	-	0	ID=cds-WP_271287440.1;Parent=gene-PHA55_RS13420;Dbxref=Genbank:WP_271287440.1;Name=WP_271287440.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheT;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416228.1;locus_tag=PHA55_RS13420;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_271287440.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2756324	2757307	.	-	.	ID=gene-PHA55_RS13425;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=PHA55_RS13425;old_locus_tag=PHA55_13420
NZ_CP116044.1	Protein Homology	CDS	2756324	2757307	.	-	0	ID=cds-WP_000018596.1;Parent=gene-PHA55_RS13425;Dbxref=Genbank:WP_000018596.1;Name=WP_000018596.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheS;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=PHA55_RS13425;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_000018596.1;transl_table=11
NZ_CP116044.1	cmsearch	sequence_feature	2757517	2757641	.	-	.	ID=id-NZ_CP116044.1:2757517..2757641;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1
NZ_CP116044.1	RefSeq	gene	2757591	2757635	.	-	.	ID=gene-PHA55_RS13430;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=PHA55_RS13430;old_locus_tag=PHA55_13425
NZ_CP116044.1	Protein Homology	CDS	2757591	2757635	.	-	0	ID=cds-WP_001386830.1;Parent=gene-PHA55_RS13430;Dbxref=Genbank:WP_001386830.1;Name=WP_001386830.1;gbkey=CDS;gene=pheM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=PHA55_RS13430;product=pheST operon leader peptide PheM;protein_id=WP_001386830.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2757758	2758114	.	-	.	ID=gene-PHA55_RS13435;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=PHA55_RS13435;old_locus_tag=PHA55_13430
NZ_CP116044.1	Protein Homology	CDS	2757758	2758114	.	-	0	ID=cds-WP_000124850.1;Parent=gene-PHA55_RS13435;Dbxref=Genbank:WP_000124850.1;Name=WP_000124850.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplT;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=PHA55_RS13435;product=50S ribosomal protein L20;protein_id=WP_000124850.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2758167	2758364	.	-	.	ID=gene-PHA55_RS13440;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=PHA55_RS13440;old_locus_tag=PHA55_13435
NZ_CP116044.1	Protein Homology	CDS	2758167	2758364	.	-	0	ID=cds-WP_001124225.1;Parent=gene-PHA55_RS13440;Dbxref=Genbank:WP_001124225.1;Name=WP_001124225.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmI;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=PHA55_RS13440;product=50S ribosomal protein L35;protein_id=WP_001124225.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2758461	2759003	.	-	.	ID=gene-PHA55_RS13445;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=PHA55_RS13445;old_locus_tag=PHA55_13440
NZ_CP116044.1	Protein Homology	CDS	2758461	2759003	.	-	0	ID=cds-WP_001700733.1;Parent=gene-PHA55_RS13445;Dbxref=Genbank:WP_001700733.1;Name=WP_001700733.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=PHA55_RS13445;product=translation initiation factor IF-3;protein_id=WP_001700733.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2759007	2760935	.	-	.	ID=gene-PHA55_RS13450;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=PHA55_RS13450;old_locus_tag=PHA55_13445
NZ_CP116044.1	Protein Homology	CDS	2759007	2760935	.	-	0	ID=cds-WP_001144199.1;Parent=gene-PHA55_RS13450;Dbxref=Genbank:WP_001144199.1;Name=WP_001144199.1;Ontology_term=GO:0006435,GO:0004829,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=PHA55_RS13450;product=threonine--tRNA ligase;protein_id=WP_001144199.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2761459	2763357	.	+	.	ID=gene-PHA55_RS13455;Name=espL1;gbkey=Gene;gene=espL1;gene_biotype=protein_coding;locus_tag=PHA55_RS13455;old_locus_tag=PHA55_13450
NZ_CP116044.1	Protein Homology	CDS	2761459	2763357	.	+	0	ID=cds-WP_028131389.1;Parent=gene-PHA55_RS13455;Dbxref=Genbank:WP_028131389.1;Name=WP_028131389.1;gbkey=CDS;gene=espL1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310454.1;locus_tag=PHA55_RS13455;product=type III secretion system effector EspL1;protein_id=WP_028131389.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2763533	2763640	.	+	.	ID=gene-PHA55_RS13460;Name=yniD;gbkey=Gene;gene=yniD;gene_biotype=protein_coding;locus_tag=PHA55_RS13460;old_locus_tag=PHA55_13455
NZ_CP116044.1	Protein Homology	CDS	2763533	2763640	.	+	0	ID=cds-WP_001142445.1;Parent=gene-PHA55_RS13460;Dbxref=Genbank:WP_001142445.1;Name=WP_001142445.1;gbkey=CDS;gene=yniD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588455.2;locus_tag=PHA55_RS13460;product=hypothetical protein;protein_id=WP_001142445.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2763693	2764451	.	-	.	ID=gene-PHA55_RS13465;Name=ydiY;gbkey=Gene;gene=ydiY;gene_biotype=protein_coding;locus_tag=PHA55_RS13465;old_locus_tag=PHA55_13460
NZ_CP116044.1	Protein Homology	CDS	2763693	2764451	.	-	0	ID=cds-WP_000771396.1;Parent=gene-PHA55_RS13465;Dbxref=Genbank:WP_000771396.1;Name=WP_000771396.1;gbkey=CDS;gene=ydiY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310455.1;locus_tag=PHA55_RS13465;product=YdiY family protein;protein_id=WP_000771396.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2764738	2765667	.	+	.	ID=gene-PHA55_RS13470;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=PHA55_RS13470;old_locus_tag=PHA55_13465
NZ_CP116044.1	Protein Homology	CDS	2764738	2765667	.	+	0	ID=cds-WP_000251735.1;Parent=gene-PHA55_RS13470;Dbxref=Genbank:WP_000251735.1;Name=WP_000251735.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;gene=pfkB;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707391.2;locus_tag=PHA55_RS13470;product=6-phosphofructokinase II;protein_id=WP_000251735.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2765768	2766058	.	+	.	ID=gene-PHA55_RS13475;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=PHA55_RS13475;old_locus_tag=PHA55_13470
NZ_CP116044.1	Protein Homology	CDS	2765768	2766058	.	+	0	ID=cds-WP_000146159.1;Parent=gene-PHA55_RS13475;Dbxref=Genbank:WP_000146159.1;Name=WP_000146159.1;Ontology_term=GO:0004521;gbkey=CDS;gene=ghoS;go_function=endoribonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310457.1;locus_tag=PHA55_RS13475;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_000146159.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2766164	2767024	.	+	.	ID=gene-PHA55_RS13480;Name=yniA;gbkey=Gene;gene=yniA;gene_biotype=protein_coding;locus_tag=PHA55_RS13480;old_locus_tag=PHA55_13475
NZ_CP116044.1	Protein Homology	CDS	2766164	2767024	.	+	0	ID=cds-WP_000267654.1;Parent=gene-PHA55_RS13480;Dbxref=Genbank:WP_000267654.1;Name=WP_000267654.1;gbkey=CDS;gene=yniA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310458.1;locus_tag=PHA55_RS13480;product=fructosamine kinase family protein;protein_id=WP_000267654.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2767065	2767601	.	-	.	ID=gene-PHA55_RS13485;Name=yniB;gbkey=Gene;gene=yniB;gene_biotype=protein_coding;locus_tag=PHA55_RS13485;old_locus_tag=PHA55_13480
NZ_CP116044.1	Protein Homology	CDS	2767065	2767601	.	-	0	ID=cds-WP_000222172.1;Parent=gene-PHA55_RS13485;Dbxref=Genbank:WP_000222172.1;Name=WP_000222172.1;gbkey=CDS;gene=yniB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416240.1;locus_tag=PHA55_RS13485;product=YniB family protein;protein_id=WP_000222172.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2767748	2768416	.	+	.	ID=gene-PHA55_RS13490;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=PHA55_RS13490;old_locus_tag=PHA55_13485
NZ_CP116044.1	Protein Homology	CDS	2767748	2768416	.	+	0	ID=cds-WP_000106834.1;Parent=gene-PHA55_RS13490;Dbxref=Genbank:WP_000106834.1;Name=WP_000106834.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310460.1;locus_tag=PHA55_RS13490;product=hexitol phosphatase HxpB;protein_id=WP_000106834.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2768579	2769169	.	+	.	ID=gene-PHA55_RS13495;Name=ydjM;gbkey=Gene;gene=ydjM;gene_biotype=protein_coding;locus_tag=PHA55_RS13495;old_locus_tag=PHA55_13490
NZ_CP116044.1	Protein Homology	CDS	2768579	2769169	.	+	0	ID=cds-WP_001297653.1;Parent=gene-PHA55_RS13495;Dbxref=Genbank:WP_001297653.1;Name=WP_001297653.1;gbkey=CDS;gene=ydjM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707386.2;locus_tag=PHA55_RS13495;product=metal-dependent hydrolase;protein_id=WP_001297653.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2769302	2770693	.	+	.	ID=gene-PHA55_RS13500;Name=tcyP;gbkey=Gene;gene=tcyP;gene_biotype=protein_coding;locus_tag=PHA55_RS13500;old_locus_tag=PHA55_13495
NZ_CP116044.1	Protein Homology	CDS	2769302	2770693	.	+	0	ID=cds-WP_001010722.1;Parent=gene-PHA55_RS13500;Dbxref=Genbank:WP_001010722.1;Name=WP_001010722.1;gbkey=CDS;gene=tcyP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120792.1;locus_tag=PHA55_RS13500;product=cystine/sulfocysteine:cation symporter;protein_id=WP_001010722.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	2770697	2771501	.	-	.	ID=gene-PHA55_RS13505;Name=PHA55_RS13505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS13505;old_locus_tag=PHA55_13500;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	2770697	2771501	.	-	0	ID=cds-PHA55_RS13505;Parent=gene-PHA55_RS13505;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416244.2;locus_tag=PHA55_RS13505;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	2771790	2772053	.	-	.	ID=gene-PHA55_RS13510;Name=cedA;gbkey=Gene;gene=cedA;gene_biotype=protein_coding;locus_tag=PHA55_RS13510;old_locus_tag=PHA55_13505
NZ_CP116044.1	Protein Homology	CDS	2771790	2772053	.	-	0	ID=cds-WP_001241561.1;Parent=gene-PHA55_RS13510;Dbxref=Genbank:WP_001241561.1;Name=WP_001241561.1;gbkey=CDS;gene=cedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310464.1;locus_tag=PHA55_RS13510;product=cell division activator CedA;protein_id=WP_001241561.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2772236	2774497	.	+	.	ID=gene-PHA55_RS13515;Name=katE;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=PHA55_RS13515;old_locus_tag=PHA55_13510
NZ_CP116044.1	Protein Homology	CDS	2772236	2774497	.	+	0	ID=cds-WP_001748461.1;Parent=gene-PHA55_RS13515;Dbxref=Genbank:WP_001748461.1;Name=WP_001748461.1;Ontology_term=GO:0006979,GO:0004096,GO:0020037;gbkey=CDS;gene=katE;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025308.1;locus_tag=PHA55_RS13515;product=catalase HPII;protein_id=WP_001748461.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2774732	2775712	.	-	.	ID=gene-PHA55_RS13520;Name=PHA55_RS13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS13520;old_locus_tag=PHA55_13515
NZ_CP116044.1	Protein Homology	CDS	2774732	2775712	.	-	0	ID=cds-WP_000399652.1;Parent=gene-PHA55_RS13520;Dbxref=Genbank:WP_000399652.1;Name=WP_000399652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904434.1;locus_tag=PHA55_RS13520;product=IS110-like element IS621 family transposase;protein_id=WP_000399652.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2776034	2776792	.	-	.	ID=gene-PHA55_RS13525;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=PHA55_RS13525;old_locus_tag=PHA55_13520
NZ_CP116044.1	Protein Homology	CDS	2776034	2776792	.	-	0	ID=cds-WP_033817429.1;Parent=gene-PHA55_RS13525;Dbxref=Genbank:WP_033817429.1;Name=WP_033817429.1;Ontology_term=GO:0000272,GO:0016811;gbkey=CDS;gene=chbG;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707379.1;locus_tag=PHA55_RS13525;product=chitin disaccharide deacetylase;protein_id=WP_033817429.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2776805	2778157	.	-	.	ID=gene-PHA55_RS13530;Name=celF;gbkey=Gene;gene=celF;gene_biotype=protein_coding;gene_synonym=chbF;locus_tag=PHA55_RS13530;old_locus_tag=PHA55_13525
NZ_CP116044.1	Protein Homology	CDS	2776805	2778157	.	-	0	ID=cds-WP_000078722.1;Parent=gene-PHA55_RS13530;Dbxref=Genbank:WP_000078722.1;Name=WP_000078722.1;gbkey=CDS;gene=celF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310467.1;locus_tag=PHA55_RS13530;product=6-phospho-beta-glucosidase;protein_id=WP_000078722.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2778262	2779104	.	-	.	ID=gene-PHA55_RS13535;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=PHA55_RS13535;old_locus_tag=PHA55_13530
NZ_CP116044.1	Protein Homology	CDS	2778262	2779104	.	-	0	ID=cds-WP_000983653.1;Parent=gene-PHA55_RS13535;Dbxref=Genbank:WP_000983653.1;Name=WP_000983653.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=chbR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416249.1;locus_tag=PHA55_RS13535;product=transcriptional regulator ChbR;protein_id=WP_000983653.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2779112	2779462	.	-	.	ID=gene-PHA55_RS13540;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=PHA55_RS13540;old_locus_tag=PHA55_13535
NZ_CP116044.1	Protein Homology	CDS	2779112	2779462	.	-	0	ID=cds-WP_000968919.1;Parent=gene-PHA55_RS13540;Dbxref=Genbank:WP_000968919.1;Name=WP_000968919.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310469.1;locus_tag=PHA55_RS13540;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=WP_000968919.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2779513	2780871	.	-	.	ID=gene-PHA55_RS13545;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=PHA55_RS13545;old_locus_tag=PHA55_13540
NZ_CP116044.1	Protein Homology	CDS	2779513	2780871	.	-	0	ID=cds-WP_000073041.1;Parent=gene-PHA55_RS13545;Dbxref=Genbank:WP_000073041.1;Name=WP_000073041.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=chbC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416251.1;locus_tag=PHA55_RS13545;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=WP_000073041.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2780956	2781276	.	-	.	ID=gene-PHA55_RS13550;Name=chbB;gbkey=Gene;gene=chbB;gene_biotype=protein_coding;locus_tag=PHA55_RS13550;old_locus_tag=PHA55_13545
NZ_CP116044.1	Protein Homology	CDS	2780956	2781276	.	-	0	ID=cds-WP_000412169.1;Parent=gene-PHA55_RS13550;Dbxref=Genbank:WP_000412169.1;Name=WP_000412169.1;gbkey=CDS;gene=chbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310471.1;locus_tag=PHA55_RS13550;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;protein_id=WP_000412169.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2781575	2781913	.	-	.	ID=gene-PHA55_RS13555;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=PHA55_RS13555;old_locus_tag=PHA55_13550
NZ_CP116044.1	Protein Homology	CDS	2781575	2781913	.	-	0	ID=cds-WP_001039044.1;Parent=gene-PHA55_RS13555;Dbxref=Genbank:WP_001039044.1;Name=WP_001039044.1;Ontology_term=GO:0019867;gbkey=CDS;gene=osmE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310472.1;locus_tag=PHA55_RS13555;product=osmotically-inducible lipoprotein OsmE;protein_id=WP_001039044.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2782115	2782942	.	+	.	ID=gene-PHA55_RS13560;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=PHA55_RS13560;old_locus_tag=PHA55_13555
NZ_CP116044.1	Protein Homology	CDS	2782115	2782942	.	+	0	ID=cds-WP_000175009.1;Parent=gene-PHA55_RS13560;Dbxref=Genbank:WP_000175009.1;Name=WP_000175009.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416254.1;locus_tag=PHA55_RS13560;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_000175009.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2783172	2784059	.	+	.	ID=gene-PHA55_RS13565;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;locus_tag=PHA55_RS13565;old_locus_tag=PHA55_13560
NZ_CP116044.1	Protein Homology	CDS	2783172	2784059	.	+	0	ID=cds-WP_000252386.1;Parent=gene-PHA55_RS13565;Dbxref=Genbank:WP_000252386.1;Name=WP_000252386.1;gbkey=CDS;gene=cho;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310474.1;locus_tag=PHA55_RS13565;product=excinuclease Cho;protein_id=WP_000252386.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2784019	2784594	.	-	.	ID=gene-PHA55_RS13570;Name=ves;gbkey=Gene;gene=ves;gene_biotype=protein_coding;locus_tag=PHA55_RS13570;old_locus_tag=PHA55_13565
NZ_CP116044.1	Protein Homology	CDS	2784019	2784594	.	-	0	ID=cds-WP_001302036.1;Parent=gene-PHA55_RS13570;Dbxref=Genbank:WP_001302036.1;Name=WP_001302036.1;gbkey=CDS;gene=ves;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310475.2;locus_tag=PHA55_RS13570;product=environmental stress-induced protein Ves;protein_id=WP_001302036.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2784797	2785282	.	-	.	ID=gene-PHA55_RS13575;Name=spy;gbkey=Gene;gene=spy;gene_biotype=protein_coding;locus_tag=PHA55_RS13575;old_locus_tag=PHA55_13570
NZ_CP116044.1	Protein Homology	CDS	2784797	2785282	.	-	0	ID=cds-WP_001228981.1;Parent=gene-PHA55_RS13575;Dbxref=Genbank:WP_001228981.1;Name=WP_001228981.1;Ontology_term=GO:0042597;gbkey=CDS;gene=spy;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310476.1;locus_tag=PHA55_RS13575;product=ATP-independent periplasmic protein-refolding chaperone Spy;protein_id=WP_001228981.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2785612	2786580	.	-	.	ID=gene-PHA55_RS13580;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=PHA55_RS13580;old_locus_tag=PHA55_13575
NZ_CP116044.1	Protein Homology	CDS	2785612	2786580	.	-	0	ID=cds-WP_000368506.1;Parent=gene-PHA55_RS13580;Dbxref=Genbank:WP_000368506.1;Name=WP_000368506.1;Ontology_term=GO:0006527,GO:0009017;gbkey=CDS;gene=astE;go_function=succinylglutamate desuccinylase activity|0009017||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416258.1;locus_tag=PHA55_RS13580;product=succinylglutamate desuccinylase;protein_id=WP_000368506.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2786573	2787916	.	-	.	ID=gene-PHA55_RS13585;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=PHA55_RS13585;old_locus_tag=PHA55_13580
NZ_CP116044.1	Protein Homology	CDS	2786573	2787916	.	-	0	ID=cds-WP_000995007.1;Parent=gene-PHA55_RS13585;Dbxref=Genbank:WP_000995007.1;Name=WP_000995007.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416259.1;locus_tag=PHA55_RS13585;product=N-succinylarginine dihydrolase;protein_id=WP_000995007.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2787913	2789391	.	-	.	ID=gene-PHA55_RS13590;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=PHA55_RS13590;old_locus_tag=PHA55_13585
NZ_CP116044.1	Protein Homology	CDS	2787913	2789391	.	-	0	ID=cds-WP_000177208.1;Parent=gene-PHA55_RS13590;Dbxref=Genbank:WP_000177208.1;Name=WP_000177208.1;Ontology_term=GO:0006527,GO:0016620;gbkey=CDS;gene=astD;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310479.1;locus_tag=PHA55_RS13590;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_000177208.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2789388	2790422	.	-	.	ID=gene-PHA55_RS13595;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=PHA55_RS13595;old_locus_tag=PHA55_13590
NZ_CP116044.1	Protein Homology	CDS	2789388	2790422	.	-	0	ID=cds-WP_000989414.1;Parent=gene-PHA55_RS13595;Dbxref=Genbank:WP_000989414.1;Name=WP_000989414.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310480.1;locus_tag=PHA55_RS13595;product=arginine N-succinyltransferase;protein_id=WP_000989414.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2790419	2791639	.	-	.	ID=gene-PHA55_RS13600;Name=astC;gbkey=Gene;gene=astC;gene_biotype=protein_coding;locus_tag=PHA55_RS13600;old_locus_tag=PHA55_13595
NZ_CP116044.1	Protein Homology	CDS	2790419	2791639	.	-	0	ID=cds-WP_000081983.1;Parent=gene-PHA55_RS13600;Dbxref=Genbank:WP_000081983.1;Name=WP_000081983.1;gbkey=CDS;gene=astC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416262.1;locus_tag=PHA55_RS13600;product=succinylornithine/acetylornithine transaminase;protein_id=WP_000081983.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2792085	2792891	.	+	.	ID=gene-PHA55_RS13605;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=PHA55_RS13605;old_locus_tag=PHA55_13600
NZ_CP116044.1	Protein Homology	CDS	2792085	2792891	.	+	0	ID=cds-WP_000673918.1;Parent=gene-PHA55_RS13605;Dbxref=Genbank:WP_000673918.1;Name=WP_000673918.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008853;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,exodeoxyribonuclease III activity|0008853||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416263.1;locus_tag=PHA55_RS13605;product=exodeoxyribonuclease III;protein_id=WP_000673918.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2793058	2793768	.	+	.	ID=gene-PHA55_RS13610;Name=ydjX;gbkey=Gene;gene=ydjX;gene_biotype=protein_coding;locus_tag=PHA55_RS13610;old_locus_tag=PHA55_13605
NZ_CP116044.1	Protein Homology	CDS	2793058	2793768	.	+	0	ID=cds-WP_001447388.1;Parent=gene-PHA55_RS13610;Dbxref=Genbank:WP_001447388.1;Name=WP_001447388.1;gbkey=CDS;gene=ydjX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416264.4;locus_tag=PHA55_RS13610;product=TVP38/TMEM64 family protein;protein_id=WP_001447388.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2793773	2794450	.	+	.	ID=gene-PHA55_RS13615;Name=ydjY;gbkey=Gene;gene=ydjY;gene_biotype=protein_coding;locus_tag=PHA55_RS13615;old_locus_tag=PHA55_13610
NZ_CP116044.1	Protein Homology	CDS	2793773	2794450	.	+	0	ID=cds-WP_000077941.1;Parent=gene-PHA55_RS13615;Dbxref=Genbank:WP_000077941.1;Name=WP_000077941.1;gbkey=CDS;gene=ydjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416265.4;locus_tag=PHA55_RS13615;product=lipoprotein YdjY;protein_id=WP_000077941.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2794465	2795172	.	+	.	ID=gene-PHA55_RS13620;Name=ydjZ;gbkey=Gene;gene=ydjZ;gene_biotype=protein_coding;locus_tag=PHA55_RS13620;old_locus_tag=PHA55_13615
NZ_CP116044.1	Protein Homology	CDS	2794465	2795172	.	+	0	ID=cds-WP_000975812.1;Parent=gene-PHA55_RS13620;Dbxref=Genbank:WP_000975812.1;Name=WP_000975812.1;gbkey=CDS;gene=ydjZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310485.1;locus_tag=PHA55_RS13620;product=TVP38/TMEM64 family protein;protein_id=WP_000975812.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2795172	2795720	.	+	.	ID=gene-PHA55_RS13625;Name=ynjA;gbkey=Gene;gene=ynjA;gene_biotype=protein_coding;locus_tag=PHA55_RS13625;old_locus_tag=PHA55_13620
NZ_CP116044.1	Protein Homology	CDS	2795172	2795720	.	+	0	ID=cds-WP_000524080.1;Parent=gene-PHA55_RS13625;Dbxref=Genbank:WP_000524080.1;Name=WP_000524080.1;gbkey=CDS;gene=ynjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310486.1;locus_tag=PHA55_RS13625;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_000524080.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2795730	2796896	.	+	.	ID=gene-PHA55_RS13630;Name=ynjB;gbkey=Gene;gene=ynjB;gene_biotype=protein_coding;locus_tag=PHA55_RS13630;old_locus_tag=PHA55_13625
NZ_CP116044.1	Protein Homology	CDS	2795730	2796896	.	+	0	ID=cds-WP_001215298.1;Parent=gene-PHA55_RS13630;Dbxref=Genbank:WP_001215298.1;Name=WP_001215298.1;gbkey=CDS;gene=ynjB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416268.2;locus_tag=PHA55_RS13630;product=ABC transporter substrate-binding protein;protein_id=WP_001215298.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2796869	2798404	.	+	.	ID=gene-PHA55_RS13635;Name=ynjC;gbkey=Gene;gene=ynjC;gene_biotype=protein_coding;locus_tag=PHA55_RS13635;old_locus_tag=PHA55_13630
NZ_CP116044.1	Protein Homology	CDS	2796869	2798404	.	+	0	ID=cds-WP_042099509.1;Parent=gene-PHA55_RS13635;Dbxref=Genbank:WP_042099509.1;Name=WP_042099509.1;gbkey=CDS;gene=ynjC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416269.4;locus_tag=PHA55_RS13635;product=ABC transporter permease;protein_id=WP_042099509.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2798404	2799057	.	+	.	ID=gene-PHA55_RS13640;Name=ynjD;gbkey=Gene;gene=ynjD;gene_biotype=protein_coding;locus_tag=PHA55_RS13640;old_locus_tag=PHA55_13635
NZ_CP116044.1	Protein Homology	CDS	2798404	2799057	.	+	0	ID=cds-WP_001299561.1;Parent=gene-PHA55_RS13640;Dbxref=Genbank:WP_001299561.1;Name=WP_001299561.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ynjD;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310489.1;locus_tag=PHA55_RS13640;product=ATP-binding cassette domain-containing protein;protein_id=WP_001299561.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2799124	2800431	.	+	.	ID=gene-PHA55_RS13645;Name=ynjE;gbkey=Gene;gene=ynjE;gene_biotype=protein_coding;locus_tag=PHA55_RS13645;old_locus_tag=PHA55_13640
NZ_CP116044.1	Protein Homology	CDS	2799124	2800431	.	+	0	ID=cds-WP_001356079.1;Parent=gene-PHA55_RS13645;Dbxref=Genbank:WP_001356079.1;Name=WP_001356079.1;gbkey=CDS;gene=ynjE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416271.4;locus_tag=PHA55_RS13645;product=thiosulfate sulfurtransferase YnjE;protein_id=WP_001356079.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2800440	2801060	.	-	.	ID=gene-PHA55_RS13650;Name=ynjF;gbkey=Gene;gene=ynjF;gene_biotype=protein_coding;locus_tag=PHA55_RS13650;old_locus_tag=PHA55_13645
NZ_CP116044.1	Protein Homology	CDS	2800440	2801060	.	-	0	ID=cds-WP_001307237.1;Parent=gene-PHA55_RS13650;Dbxref=Genbank:WP_001307237.1;Name=WP_001307237.1;gbkey=CDS;gene=ynjF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707357.2;locus_tag=PHA55_RS13650;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_001307237.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2801147	2801554	.	+	.	ID=gene-PHA55_RS13655;Name=nudG;gbkey=Gene;gene=nudG;gene_biotype=protein_coding;locus_tag=PHA55_RS13655;old_locus_tag=PHA55_13650
NZ_CP116044.1	Protein Homology	CDS	2801147	2801554	.	+	0	ID=cds-WP_000781892.1;Parent=gene-PHA55_RS13655;Dbxref=Genbank:WP_000781892.1;Name=WP_000781892.1;gbkey=CDS;gene=nudG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416273.1;locus_tag=PHA55_RS13655;product=CTP pyrophosphohydrolase;protein_id=WP_000781892.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2801520	2801792	.	-	.	ID=gene-PHA55_RS13660;Name=ynjH;gbkey=Gene;gene=ynjH;gene_biotype=protein_coding;locus_tag=PHA55_RS13660;old_locus_tag=PHA55_13655
NZ_CP116044.1	Protein Homology	CDS	2801520	2801792	.	-	0	ID=cds-WP_000085233.1;Parent=gene-PHA55_RS13660;Dbxref=Genbank:WP_000085233.1;Name=WP_000085233.1;gbkey=CDS;gene=ynjH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416274.1;locus_tag=PHA55_RS13660;product=YnjH family protein;protein_id=WP_000085233.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2802028	2803371	.	+	.	ID=gene-PHA55_RS13665;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=PHA55_RS13665;old_locus_tag=PHA55_13660
NZ_CP116044.1	Protein Homology	CDS	2802028	2803371	.	+	0	ID=cds-WP_000373043.1;Parent=gene-PHA55_RS13665;Dbxref=Genbank:WP_000373043.1;Name=WP_000373043.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310494.1;locus_tag=PHA55_RS13665;product=NADP-specific glutamate dehydrogenase;protein_id=WP_000373043.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	2803488	2804529	.	-	.	ID=gene-PHA55_RS13670;Name=ynjI;gbkey=Gene;gene=ynjI;gene_biotype=pseudogene;locus_tag=PHA55_RS13670;old_locus_tag=PHA55_13665;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	2803488	2804529	.	-	0	ID=cds-PHA55_RS13670;Parent=gene-PHA55_RS13670;Note=frameshifted;gbkey=CDS;gene=ynjI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416276.4;locus_tag=PHA55_RS13670;product=DUF1266 domain-containing protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	2804657	2806618	.	-	.	ID=gene-PHA55_RS13675;Name=topB;gbkey=Gene;gene=topB;gene_biotype=protein_coding;locus_tag=PHA55_RS13675;old_locus_tag=PHA55_13670
NZ_CP116044.1	Protein Homology	CDS	2804657	2806618	.	-	0	ID=cds-WP_001235819.1;Parent=gene-PHA55_RS13675;Dbxref=Genbank:WP_001235819.1;Name=WP_001235819.1;gbkey=CDS;gene=topB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416277.1;locus_tag=PHA55_RS13675;product=DNA topoisomerase III;protein_id=WP_001235819.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2806623	2807666	.	-	.	ID=gene-PHA55_RS13680;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=PHA55_RS13680;old_locus_tag=PHA55_13675
NZ_CP116044.1	Protein Homology	CDS	2806623	2807666	.	-	0	ID=cds-WP_001298241.1;Parent=gene-PHA55_RS13680;Dbxref=Genbank:WP_001298241.1;Name=WP_001298241.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310497.1;locus_tag=PHA55_RS13680;product=selenide%2C water dikinase SelD;protein_id=WP_001298241.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2807783	2808334	.	-	.	ID=gene-PHA55_RS13685;Name=ydjA;gbkey=Gene;gene=ydjA;gene_biotype=protein_coding;locus_tag=PHA55_RS13685;old_locus_tag=PHA55_13680
NZ_CP116044.1	Protein Homology	CDS	2807783	2808334	.	-	0	ID=cds-WP_000339283.1;Parent=gene-PHA55_RS13685;Dbxref=Genbank:WP_000339283.1;Name=WP_000339283.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydjA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310498.1;locus_tag=PHA55_RS13685;product=NAD(P)H nitroreductase;protein_id=WP_000339283.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2808495	2810351	.	+	.	ID=gene-PHA55_RS13690;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=PHA55_RS13690;old_locus_tag=PHA55_13685
NZ_CP116044.1	Protein Homology	CDS	2808495	2810351	.	+	0	ID=cds-WP_001259809.1;Parent=gene-PHA55_RS13690;Dbxref=Genbank:WP_001259809.1;Name=WP_001259809.1;Ontology_term=GO:0006465,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416280.1;locus_tag=PHA55_RS13690;product=signal peptide peptidase SppA;protein_id=WP_001259809.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2810518	2811534	.	+	.	ID=gene-PHA55_RS13695;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=PHA55_RS13695;old_locus_tag=PHA55_13690
NZ_CP116044.1	Protein Homology	CDS	2810518	2811534	.	+	0	ID=cds-WP_001170162.1;Parent=gene-PHA55_RS13695;Dbxref=Genbank:WP_001170162.1;Name=WP_001170162.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310501.1;locus_tag=PHA55_RS13695;product=asparaginase;protein_id=WP_001170162.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2811545	2812186	.	+	.	ID=gene-PHA55_RS13700;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=PHA55_RS13700;old_locus_tag=PHA55_13695
NZ_CP116044.1	Protein Homology	CDS	2811545	2812186	.	+	0	ID=cds-WP_001135062.1;Parent=gene-PHA55_RS13700;Dbxref=Genbank:WP_001135062.1;Name=WP_001135062.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310502.2;locus_tag=PHA55_RS13700;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_001135062.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2812347	2812619	.	-	.	ID=gene-PHA55_RS13705;Name=yeaC;gbkey=Gene;gene=yeaC;gene_biotype=protein_coding;locus_tag=PHA55_RS13705;old_locus_tag=PHA55_13700
NZ_CP116044.1	Protein Homology	CDS	2812347	2812619	.	-	0	ID=cds-WP_001046790.1;Parent=gene-PHA55_RS13705;Dbxref=Genbank:WP_001046790.1;Name=WP_001046790.1;gbkey=CDS;gene=yeaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707337.2;locus_tag=PHA55_RS13705;product=YeaC family protein;protein_id=WP_001046790.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2812661	2813074	.	-	.	ID=gene-PHA55_RS13710;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=PHA55_RS13710;old_locus_tag=PHA55_13705
NZ_CP116044.1	Protein Homology	CDS	2812661	2813074	.	-	0	ID=cds-WP_001284618.1;Parent=gene-PHA55_RS13710;Dbxref=Genbank:WP_001284618.1;Name=WP_001284618.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310514.1;locus_tag=PHA55_RS13710;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_001284618.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2813416	2814411	.	+	.	ID=gene-PHA55_RS13715;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=PHA55_RS13715;old_locus_tag=PHA55_13710
NZ_CP116044.1	Protein Homology	CDS	2813416	2814411	.	+	0	ID=cds-WP_000153502.1;Parent=gene-PHA55_RS13715;Dbxref=Genbank:WP_000153502.1;Name=WP_000153502.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1;locus_tag=PHA55_RS13715;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_000153502.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2814495	2815379	.	+	.	ID=gene-PHA55_RS13720;Name=yeaD;gbkey=Gene;gene=yeaD;gene_biotype=protein_coding;locus_tag=PHA55_RS13720;old_locus_tag=PHA55_13715
NZ_CP116044.1	Protein Homology	CDS	2814495	2815379	.	+	0	ID=cds-WP_001299317.1;Parent=gene-PHA55_RS13720;Dbxref=Genbank:WP_001299317.1;Name=WP_001299317.1;gbkey=CDS;gene=yeaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707334.2;locus_tag=PHA55_RS13720;product=D-hexose-6-phosphate mutarotase;protein_id=WP_001299317.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2815430	2816284	.	-	.	ID=gene-PHA55_RS13725;Name=yeaE;gbkey=Gene;gene=yeaE;gene_biotype=protein_coding;locus_tag=PHA55_RS13725;old_locus_tag=PHA55_13720
NZ_CP116044.1	Protein Homology	CDS	2815430	2816284	.	-	0	ID=cds-WP_042099507.1;Parent=gene-PHA55_RS13725;Dbxref=Genbank:WP_042099507.1;Name=WP_042099507.1;gbkey=CDS;gene=yeaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310517.1;locus_tag=PHA55_RS13725;product=methylglyoxal reductase YeaE;protein_id=WP_042099507.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2816374	2817120	.	-	.	ID=gene-PHA55_RS13730;Name=mipA;gbkey=Gene;gene=mipA;gene_biotype=protein_coding;locus_tag=PHA55_RS13730;old_locus_tag=PHA55_13725
NZ_CP116044.1	Protein Homology	CDS	2816374	2817120	.	-	0	ID=cds-WP_000163771.1;Parent=gene-PHA55_RS13730;Dbxref=Genbank:WP_000163771.1;Name=WP_000163771.1;gbkey=CDS;gene=mipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416296.1;locus_tag=PHA55_RS13730;product=scaffolding protein MipA;protein_id=WP_000163771.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2817556	2819490	.	+	.	ID=gene-PHA55_RS13735;Name=yeaG;gbkey=Gene;gene=yeaG;gene_biotype=protein_coding;locus_tag=PHA55_RS13735;old_locus_tag=PHA55_13730
NZ_CP116044.1	Protein Homology	CDS	2817556	2819490	.	+	0	ID=cds-WP_001019882.1;Parent=gene-PHA55_RS13735;Dbxref=Genbank:WP_001019882.1;Name=WP_001019882.1;gbkey=CDS;gene=yeaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310519.1;locus_tag=PHA55_RS13735;product=protein kinase YeaG;protein_id=WP_001019882.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2819603	2820886	.	+	.	ID=gene-PHA55_RS13740;Name=yeaH;gbkey=Gene;gene=yeaH;gene_biotype=protein_coding;locus_tag=PHA55_RS13740;old_locus_tag=PHA55_13735
NZ_CP116044.1	Protein Homology	CDS	2819603	2820886	.	+	0	ID=cds-WP_000219686.1;Parent=gene-PHA55_RS13740;Dbxref=Genbank:WP_000219686.1;Name=WP_000219686.1;gbkey=CDS;gene=yeaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310520.1;locus_tag=PHA55_RS13740;product=YeaH/YhbH family protein;protein_id=WP_000219686.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2821033	2822508	.	+	.	ID=gene-PHA55_RS13745;Name=cdgI;gbkey=Gene;gene=cdgI;gene_biotype=protein_coding;locus_tag=PHA55_RS13745;old_locus_tag=PHA55_13740
NZ_CP116044.1	Protein Homology	CDS	2821033	2822508	.	+	0	ID=cds-WP_000616433.1;Parent=gene-PHA55_RS13745;Dbxref=Genbank:WP_000616433.1;Name=WP_000616433.1;gbkey=CDS;gene=cdgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416299.1;locus_tag=PHA55_RS13745;product=GGDEF domain-containing protein;protein_id=WP_000616433.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2822689	2824179	.	+	.	ID=gene-PHA55_RS13750;Name=dgcJ;gbkey=Gene;gene=dgcJ;gene_biotype=protein_coding;locus_tag=PHA55_RS13750;old_locus_tag=PHA55_13745
NZ_CP116044.1	Protein Homology	CDS	2822689	2824179	.	+	0	ID=cds-WP_000766132.1;Parent=gene-PHA55_RS13750;Dbxref=Genbank:WP_000766132.1;Name=WP_000766132.1;Ontology_term=GO:0043709,GO:1902201,GO:0052621;gbkey=CDS;gene=dgcJ;go_function=diguanylate cyclase activity|0052621||IEA;go_process=cell adhesion involved in single-species biofilm formation|0043709||IEA,negative regulation of bacterial-type flagellum-dependent cell motility|1902201||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416300.2;locus_tag=PHA55_RS13750;product=diguanylate cyclase DgcJ;protein_id=WP_000766132.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2824222	2824725	.	+	.	ID=gene-PHA55_RS13755;Name=yeaK;gbkey=Gene;gene=yeaK;gene_biotype=protein_coding;locus_tag=PHA55_RS13755;old_locus_tag=PHA55_13750
NZ_CP116044.1	Protein Homology	CDS	2824222	2824725	.	+	0	ID=cds-WP_000138052.1;Parent=gene-PHA55_RS13755;Dbxref=Genbank:WP_000138052.1;Name=WP_000138052.1;gbkey=CDS;gene=yeaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310523.1;locus_tag=PHA55_RS13755;product=mischarged aminoacyl-tRNA deacylase;protein_id=WP_000138052.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2824726	2824830	.	-	.	ID=gene-PHA55_RS13760;Name=yoaI;gbkey=Gene;gene=yoaI;gene_biotype=protein_coding;locus_tag=PHA55_RS13760;old_locus_tag=PHA55_13755
NZ_CP116044.1	Protein Homology	CDS	2824726	2824830	.	-	0	ID=cds-WP_000999630.1;Parent=gene-PHA55_RS13760;Dbxref=Genbank:WP_000999630.1;Name=WP_000999630.1;gbkey=CDS;gene=yoaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416302.2;locus_tag=PHA55_RS13760;product=hypothetical protein;protein_id=WP_000999630.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2825000	2825446	.	+	.	ID=gene-PHA55_RS13765;Name=yeaL;gbkey=Gene;gene=yeaL;gene_biotype=protein_coding;locus_tag=PHA55_RS13765;old_locus_tag=PHA55_13760
NZ_CP116044.1	Protein Homology	CDS	2825000	2825446	.	+	0	ID=cds-WP_000460707.1;Parent=gene-PHA55_RS13765;Dbxref=Genbank:WP_000460707.1;Name=WP_000460707.1;gbkey=CDS;gene=yeaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416303.1;locus_tag=PHA55_RS13765;product=DUF441 domain-containing protein;protein_id=WP_000460707.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2825403	2826224	.	-	.	ID=gene-PHA55_RS13770;Name=nimR;gbkey=Gene;gene=nimR;gene_biotype=protein_coding;locus_tag=PHA55_RS13770;old_locus_tag=PHA55_13765
NZ_CP116044.1	Protein Homology	CDS	2825403	2826224	.	-	0	ID=cds-WP_000972246.1;Parent=gene-PHA55_RS13770;Dbxref=Genbank:WP_000972246.1;Name=WP_000972246.1;gbkey=CDS;gene=nimR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416304.1;locus_tag=PHA55_RS13770;product=DNA-binding transcriptional regulator NimR;protein_id=WP_000972246.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2826321	2827502	.	+	.	ID=gene-PHA55_RS13775;Name=nimT;gbkey=Gene;gene=nimT;gene_biotype=protein_coding;locus_tag=PHA55_RS13775;old_locus_tag=PHA55_13770
NZ_CP116044.1	Protein Homology	CDS	2826321	2827502	.	+	0	ID=cds-WP_000128477.1;Parent=gene-PHA55_RS13775;Dbxref=Genbank:WP_000128477.1;Name=WP_000128477.1;gbkey=CDS;gene=nimT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310527.1;locus_tag=PHA55_RS13775;product=2-nitroimidazole transporter;protein_id=WP_000128477.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2827557	2827904	.	+	.	ID=gene-PHA55_RS13780;Name=yeaO;gbkey=Gene;gene=yeaO;gene_biotype=protein_coding;locus_tag=PHA55_RS13780;old_locus_tag=PHA55_13775
NZ_CP116044.1	Protein Homology	CDS	2827557	2827904	.	+	0	ID=cds-WP_001297652.1;Parent=gene-PHA55_RS13780;Dbxref=Genbank:WP_001297652.1;Name=WP_001297652.1;gbkey=CDS;gene=yeaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310528.2;locus_tag=PHA55_RS13780;product=DUF488 domain-containing protein;protein_id=WP_001297652.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2827926	2828180	.	-	.	ID=gene-PHA55_RS13785;Name=yoaF;gbkey=Gene;gene=yoaF;gene_biotype=protein_coding;locus_tag=PHA55_RS13785;old_locus_tag=PHA55_13780
NZ_CP116044.1	Protein Homology	CDS	2827926	2828180	.	-	0	ID=cds-WP_000691930.1;Parent=gene-PHA55_RS13785;Dbxref=Genbank:WP_000691930.1;Name=WP_000691930.1;gbkey=CDS;gene=yoaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416307.1;locus_tag=PHA55_RS13785;product=DUF333 domain-containing lipoprotein YoaF;protein_id=WP_000691930.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2828363	2829388	.	+	.	ID=gene-PHA55_RS13790;Name=dgcP;gbkey=Gene;gene=dgcP;gene_biotype=protein_coding;locus_tag=PHA55_RS13790;old_locus_tag=PHA55_13785
NZ_CP116044.1	Protein Homology	CDS	2828363	2829388	.	+	0	ID=cds-WP_001306169.1;Parent=gene-PHA55_RS13790;Dbxref=Genbank:WP_001306169.1;Name=WP_001306169.1;gbkey=CDS;gene=dgcP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416308.4;locus_tag=PHA55_RS13790;product=diguanylate cyclase DgcP;protein_id=WP_001306169.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2829421	2829519	.	+	.	ID=gene-PHA55_RS13795;Name=yoaK;gbkey=Gene;gene=yoaK;gene_biotype=protein_coding;locus_tag=PHA55_RS13795;old_locus_tag=PHA55_13790
NZ_CP116044.1	Protein Homology	CDS	2829421	2829519	.	+	0	ID=cds-WP_001219350.1;Parent=gene-PHA55_RS13795;Dbxref=Genbank:WP_001219350.1;Name=WP_001219350.1;gbkey=CDS;gene=yoaK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791242.1;locus_tag=PHA55_RS13795;product=YoaK family small membrane protein;protein_id=WP_001219350.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2829522	2829596	.	+	.	ID=gene-PHA55_RS13800;Name=yoaJ;gbkey=Gene;gene=yoaJ;gene_biotype=protein_coding;locus_tag=PHA55_RS13800;old_locus_tag=PHA55_13795
NZ_CP116044.1	Protein Homology	CDS	2829522	2829596	.	+	0	ID=cds-WP_001386836.1;Parent=gene-PHA55_RS13800;Dbxref=Genbank:WP_001386836.1;Name=WP_001386836.1;gbkey=CDS;gene=yoaJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791243.1;locus_tag=PHA55_RS13800;product=protein YoaJ;protein_id=WP_001386836.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2829655	2829903	.	-	.	ID=gene-PHA55_RS13805;Name=yeaQ;gbkey=Gene;gene=yeaQ;gene_biotype=protein_coding;locus_tag=PHA55_RS13805;old_locus_tag=PHA55_13800
NZ_CP116044.1	Protein Homology	CDS	2829655	2829903	.	-	0	ID=cds-WP_000512153.1;Parent=gene-PHA55_RS13805;Dbxref=Genbank:WP_000512153.1;Name=WP_000512153.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yeaQ;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310531.1;locus_tag=PHA55_RS13805;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000512153.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2830130	2831338	.	-	.	ID=gene-PHA55_RS13810;Name=PHA55_RS13810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS13810;old_locus_tag=PHA55_13805
NZ_CP116044.1	Protein Homology	CDS	2830130	2831338	.	-	0	ID=cds-WP_000826412.1;Parent=gene-PHA55_RS13810;Dbxref=Genbank:WP_000826412.1;Name=WP_000826412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415949.3;locus_tag=PHA55_RS13810;product=RNA-guided endonuclease TnpB family protein;protein_id=WP_000826412.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2831346	2831777	.	+	.	ID=gene-PHA55_RS13815;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=PHA55_RS13815;old_locus_tag=PHA55_13810
NZ_CP116044.1	Protein Homology	CDS	2831346	2831777	.	+	0	ID=cds-WP_024203870.1;Parent=gene-PHA55_RS13815;Dbxref=Genbank:WP_024203870.1;Name=WP_024203870.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313209.1;locus_tag=PHA55_RS13815;product=IS200/IS605-like element IS609 family transposase;protein_id=WP_024203870.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2831793	2831981	.	-	.	ID=gene-PHA55_RS13820;Name=PHA55_RS13820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS13820;old_locus_tag=PHA55_13815
NZ_CP116044.1	Protein Homology	CDS	2831793	2831981	.	-	0	ID=cds-WP_000513743.1;Parent=gene-PHA55_RS13820;Dbxref=Genbank:WP_000513743.1;Name=WP_000513743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001569941.1;locus_tag=PHA55_RS13820;product=DUF1869 domain-containing protein;protein_id=WP_000513743.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2831985	2832344	.	-	.	ID=gene-PHA55_RS13825;Name=yeaR;gbkey=Gene;gene=yeaR;gene_biotype=protein_coding;locus_tag=PHA55_RS13825;old_locus_tag=PHA55_13820
NZ_CP116044.1	Protein Homology	CDS	2831985	2832344	.	-	0	ID=cds-WP_001471657.1;Parent=gene-PHA55_RS13825;Dbxref=Genbank:WP_001471657.1;Name=WP_001471657.1;gbkey=CDS;gene=yeaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310533.1;locus_tag=PHA55_RS13825;product=DUF1971 domain-containing protein YeaR;protein_id=WP_001471657.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2832517	2833155	.	-	.	ID=gene-PHA55_RS13830;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=PHA55_RS13830;old_locus_tag=PHA55_13825
NZ_CP116044.1	Protein Homology	CDS	2832517	2833155	.	-	0	ID=cds-WP_000457202.1;Parent=gene-PHA55_RS13830;Dbxref=Genbank:WP_000457202.1;Name=WP_000457202.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310534.1;locus_tag=PHA55_RS13830;product=leucine efflux protein LeuE;protein_id=WP_000457202.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2833282	2834205	.	-	.	ID=gene-PHA55_RS13835;Name=dmlR;gbkey=Gene;gene=dmlR;gene_biotype=protein_coding;locus_tag=PHA55_RS13835;old_locus_tag=PHA55_13830
NZ_CP116044.1	Protein Homology	CDS	2833282	2834205	.	-	0	ID=cds-WP_001061578.1;Parent=gene-PHA55_RS13835;Dbxref=Genbank:WP_001061578.1;Name=WP_001061578.1;gbkey=CDS;gene=dmlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310535.2;locus_tag=PHA55_RS13835;product=DNA-binding transcriptional regulator DmlR;protein_id=WP_001061578.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2834308	2835393	.	+	.	ID=gene-PHA55_RS13840;Name=dmlA;gbkey=Gene;gene=dmlA;gene_biotype=protein_coding;locus_tag=PHA55_RS13840;old_locus_tag=PHA55_13835
NZ_CP116044.1	Protein Homology	CDS	2834308	2835393	.	+	0	ID=cds-WP_000978494.1;Parent=gene-PHA55_RS13840;Dbxref=Genbank:WP_000978494.1;Name=WP_000978494.1;gbkey=CDS;gene=dmlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416314.1;locus_tag=PHA55_RS13840;product=multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase;protein_id=WP_000978494.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2835644	2837254	.	+	.	ID=gene-PHA55_RS13845;Name=yeaV;gbkey=Gene;gene=yeaV;gene_biotype=protein_coding;locus_tag=PHA55_RS13845;old_locus_tag=PHA55_13840
NZ_CP116044.1	Protein Homology	CDS	2835644	2837254	.	+	0	ID=cds-WP_000987525.1;Parent=gene-PHA55_RS13845;Dbxref=Genbank:WP_000987525.1;Name=WP_000987525.1;gbkey=CDS;gene=yeaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310537.2;locus_tag=PHA55_RS13845;product=BCCT family transporter YeaV;protein_id=WP_000987525.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2837286	2838410	.	+	.	ID=gene-PHA55_RS13850;Name=yeaW;gbkey=Gene;gene=yeaW;gene_biotype=protein_coding;locus_tag=PHA55_RS13850;old_locus_tag=PHA55_13845
NZ_CP116044.1	Protein Homology	CDS	2837286	2838410	.	+	0	ID=cds-WP_000067822.1;Parent=gene-PHA55_RS13850;Dbxref=Genbank:WP_000067822.1;Name=WP_000067822.1;gbkey=CDS;gene=yeaW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310538.1;locus_tag=PHA55_RS13850;product=carnitine monooxygenase subunit YeaW;protein_id=WP_000067822.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2838466	2839431	.	+	.	ID=gene-PHA55_RS13855;Name=yeaX;gbkey=Gene;gene=yeaX;gene_biotype=protein_coding;locus_tag=PHA55_RS13855;old_locus_tag=PHA55_13850
NZ_CP116044.1	Protein Homology	CDS	2838466	2839431	.	+	0	ID=cds-WP_001287005.1;Parent=gene-PHA55_RS13855;Dbxref=Genbank:WP_001287005.1;Name=WP_001287005.1;gbkey=CDS;gene=yeaX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416317.1;locus_tag=PHA55_RS13855;product=carnitine monooxygenase subunit YeaX;protein_id=WP_001287005.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2839485	2840600	.	-	.	ID=gene-PHA55_RS13860;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=PHA55_RS13860;old_locus_tag=PHA55_13855
NZ_CP116044.1	Protein Homology	CDS	2839485	2840600	.	-	0	ID=cds-WP_001303529.1;Parent=gene-PHA55_RS13860;Dbxref=Genbank:WP_001303529.1;Name=WP_001303529.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310540.2;locus_tag=PHA55_RS13860;product=ribonuclease D;protein_id=WP_001303529.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2840682	2842367	.	-	.	ID=gene-PHA55_RS13865;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=PHA55_RS13865;old_locus_tag=PHA55_13860
NZ_CP116044.1	Protein Homology	CDS	2840682	2842367	.	-	0	ID=cds-WP_000758422.1;Parent=gene-PHA55_RS13865;Dbxref=Genbank:WP_000758422.1;Name=WP_000758422.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416319.1;locus_tag=PHA55_RS13865;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_000758422.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2842572	2843153	.	-	.	ID=gene-PHA55_RS13870;Name=yeaY;gbkey=Gene;gene=yeaY;gene_biotype=protein_coding;locus_tag=PHA55_RS13870;old_locus_tag=PHA55_13865
NZ_CP116044.1	Protein Homology	CDS	2842572	2843153	.	-	0	ID=cds-WP_000290564.1;Parent=gene-PHA55_RS13870;Dbxref=Genbank:WP_000290564.1;Name=WP_000290564.1;gbkey=CDS;gene=yeaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416320.1;locus_tag=PHA55_RS13870;product=Slp family lipoprotein YeaY;protein_id=WP_000290564.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2843193	2843888	.	-	.	ID=gene-PHA55_RS13875;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=PHA55_RS13875;old_locus_tag=PHA55_13870
NZ_CP116044.1	Protein Homology	CDS	2843193	2843888	.	-	0	ID=cds-WP_001220981.1;Parent=gene-PHA55_RS13875;Dbxref=Genbank:WP_001220981.1;Name=WP_001220981.1;Ontology_term=GO:0006400,GO:0003725;gbkey=CDS;gene=tsaB;go_function=double-stranded RNA binding|0003725||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310543.1;locus_tag=PHA55_RS13875;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_001220981.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2843946	2845856	.	-	.	ID=gene-PHA55_RS13880;Name=yoaA;gbkey=Gene;gene=yoaA;gene_biotype=protein_coding;locus_tag=PHA55_RS13880;old_locus_tag=PHA55_13875
NZ_CP116044.1	Protein Homology	CDS	2843946	2845856	.	-	0	ID=cds-WP_000128858.1;Parent=gene-PHA55_RS13880;Dbxref=Genbank:WP_000128858.1;Name=WP_000128858.1;gbkey=CDS;gene=yoaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310544.1;locus_tag=PHA55_RS13880;product=ATP-dependent DNA helicase;protein_id=WP_000128858.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2845988	2846332	.	+	.	ID=gene-PHA55_RS13885;Name=yoaB;gbkey=Gene;gene=yoaB;gene_biotype=protein_coding;locus_tag=PHA55_RS13885;old_locus_tag=PHA55_13880
NZ_CP116044.1	Protein Homology	CDS	2845988	2846332	.	+	0	ID=cds-WP_001295493.1;Parent=gene-PHA55_RS13885;Dbxref=Genbank:WP_001295493.1;Name=WP_001295493.1;gbkey=CDS;gene=yoaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416323.4;locus_tag=PHA55_RS13885;product=RidA family protein;protein_id=WP_001295493.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2846754	2847053	.	+	.	ID=gene-PHA55_RS13890;Name=yoaC;gbkey=Gene;gene=yoaC;gene_biotype=protein_coding;locus_tag=PHA55_RS13890;old_locus_tag=PHA55_13885
NZ_CP116044.1	Protein Homology	CDS	2846754	2847053	.	+	0	ID=cds-WP_001111993.1;Parent=gene-PHA55_RS13890;Dbxref=Genbank:WP_001111993.1;Name=WP_001111993.1;gbkey=CDS;gene=yoaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416324.2;locus_tag=PHA55_RS13890;product=DUF1889 family protein;protein_id=WP_001111993.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2847173	2847352	.	-	.	ID=gene-PHA55_RS13895;Name=yoaH;gbkey=Gene;gene=yoaH;gene_biotype=protein_coding;locus_tag=PHA55_RS13895;old_locus_tag=PHA55_13890
NZ_CP116044.1	Protein Homology	CDS	2847173	2847352	.	-	0	ID=cds-WP_000457334.1;Parent=gene-PHA55_RS13895;Dbxref=Genbank:WP_000457334.1;Name=WP_000457334.1;gbkey=CDS;gene=yoaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310547.1;locus_tag=PHA55_RS13895;product=YoaH family protein;protein_id=WP_000457334.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2847426	2848787	.	+	.	ID=gene-PHA55_RS13900;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=PHA55_RS13900;old_locus_tag=PHA55_13895
NZ_CP116044.1	Protein Homology	CDS	2847426	2848787	.	+	0	ID=cds-WP_000854972.1;Parent=gene-PHA55_RS13900;Dbxref=Genbank:WP_000854972.1;Name=WP_000854972.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707310.1;locus_tag=PHA55_RS13900;product=aminodeoxychorismate synthase component 1;protein_id=WP_000854972.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2848791	2849369	.	+	.	ID=gene-PHA55_RS13905;Name=nudL;gbkey=Gene;gene=nudL;gene_biotype=protein_coding;locus_tag=PHA55_RS13905;old_locus_tag=PHA55_13900
NZ_CP116044.1	Protein Homology	CDS	2848791	2849369	.	+	0	ID=cds-WP_000456725.1;Parent=gene-PHA55_RS13905;Dbxref=Genbank:WP_000456725.1;Name=WP_000456725.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;gene=nudL;go_function=magnesium ion binding|0000287||IEA,CoA pyrophosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310549.1;locus_tag=PHA55_RS13905;product=CoA pyrophosphatase;protein_id=WP_000456725.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2849553	2850917	.	+	.	ID=gene-PHA55_RS13910;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=PHA55_RS13910;old_locus_tag=PHA55_13905
NZ_CP116044.1	Protein Homology	CDS	2849553	2850917	.	+	0	ID=cds-WP_000624298.1;Parent=gene-PHA55_RS13910;Dbxref=Genbank:WP_000624298.1;Name=WP_000624298.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416328.1;locus_tag=PHA55_RS13910;product=L-serine ammonia-lyase;protein_id=WP_000624298.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2851048	2852646	.	+	.	ID=gene-PHA55_RS13915;Name=pdeD;gbkey=Gene;gene=pdeD;gene_biotype=protein_coding;locus_tag=PHA55_RS13915;old_locus_tag=PHA55_13910
NZ_CP116044.1	Protein Homology	CDS	2851048	2852646	.	+	0	ID=cds-WP_001295494.1;Parent=gene-PHA55_RS13915;Dbxref=Genbank:WP_001295494.1;Name=WP_001295494.1;gbkey=CDS;gene=pdeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416329.4;locus_tag=PHA55_RS13915;product=cyclic diguanylate phosphodiesterase;protein_id=WP_001295494.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2852650	2854206	.	-	.	ID=gene-PHA55_RS13920;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;locus_tag=PHA55_RS13920;old_locus_tag=PHA55_13915
NZ_CP116044.1	Protein Homology	CDS	2852650	2854206	.	-	0	ID=cds-WP_260589804.1;Parent=gene-PHA55_RS13920;Dbxref=Genbank:WP_260589804.1;Name=WP_260589804.1;gbkey=CDS;gene=yoaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310552.1;locus_tag=PHA55_RS13920;product=CNNM family cation transport protein YoaE;protein_id=WP_260589804.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2854194	2854352	.	-	.	ID=gene-PHA55_RS13925;Name=yoaL;gbkey=Gene;gene=yoaL;gene_biotype=protein_coding;locus_tag=PHA55_RS13925;old_locus_tag=PHA55_13920
NZ_CP116044.1	Protein Homology	CDS	2854194	2854352	.	-	0	ID=cds-WP_269212562.1;Parent=gene-PHA55_RS13925;Dbxref=Genbank:WP_269212562.1;Name=WP_269212562.1;gbkey=CDS;gene=yoaL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518795.2;locus_tag=PHA55_RS13925;product=protein YoaL;protein_id=WP_269212562.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2854669	2855640	.	+	.	ID=gene-PHA55_RS13930;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=PHA55_RS13930;old_locus_tag=PHA55_13925
NZ_CP116044.1	Protein Homology	CDS	2854669	2855640	.	+	0	ID=cds-WP_000150543.1;Parent=gene-PHA55_RS13930;Dbxref=Genbank:WP_000150543.1;Name=WP_000150543.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310554.1;locus_tag=PHA55_RS13930;product=PTS mannose transporter subunit IIAB;protein_id=WP_000150543.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2855703	2856503	.	+	.	ID=gene-PHA55_RS13935;Name=manY;gbkey=Gene;gene=manY;gene_biotype=protein_coding;locus_tag=PHA55_RS13935;old_locus_tag=PHA55_13930
NZ_CP116044.1	Protein Homology	CDS	2855703	2856503	.	+	0	ID=cds-WP_000406926.1;Parent=gene-PHA55_RS13935;Dbxref=Genbank:WP_000406926.1;Name=WP_000406926.1;gbkey=CDS;gene=manY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=PHA55_RS13935;product=PTS mannose transporter subunit IIC;protein_id=WP_000406926.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2856516	2857367	.	+	.	ID=gene-PHA55_RS13940;Name=manZ;gbkey=Gene;gene=manZ;gene_biotype=protein_coding;locus_tag=PHA55_RS13940;old_locus_tag=PHA55_13935
NZ_CP116044.1	Protein Homology	CDS	2856516	2857367	.	+	0	ID=cds-WP_000228655.1;Parent=gene-PHA55_RS13940;Dbxref=Genbank:WP_000228655.1;Name=WP_000228655.1;gbkey=CDS;gene=manZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020804907.1;locus_tag=PHA55_RS13940;product=PTS mannose transporter subunit IID;protein_id=WP_000228655.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2857422	2857880	.	+	.	ID=gene-PHA55_RS13945;Name=yobD;gbkey=Gene;gene=yobD;gene_biotype=protein_coding;locus_tag=PHA55_RS13945;old_locus_tag=PHA55_13940
NZ_CP116044.1	Protein Homology	CDS	2857422	2857880	.	+	0	ID=cds-WP_000156255.1;Parent=gene-PHA55_RS13945;Dbxref=Genbank:WP_000156255.1;Name=WP_000156255.1;gbkey=CDS;gene=yobD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416334.1;locus_tag=PHA55_RS13945;product=DUF986 family protein;protein_id=WP_000156255.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2858309	2858875	.	+	.	ID=gene-PHA55_RS13950;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=PHA55_RS13950;old_locus_tag=PHA55_13945
NZ_CP116044.1	Protein Homology	CDS	2858309	2858875	.	+	0	ID=cds-WP_001296134.1;Parent=gene-PHA55_RS13950;Dbxref=Genbank:WP_001296134.1;Name=WP_001296134.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416335.4;locus_tag=PHA55_RS13950;product=manganese efflux pump MntP;protein_id=WP_001296134.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2858872	2859681	.	-	.	ID=gene-PHA55_RS13955;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=PHA55_RS13955;old_locus_tag=PHA55_13950
NZ_CP116044.1	Protein Homology	CDS	2858872	2859681	.	-	0	ID=cds-WP_000010129.1;Parent=gene-PHA55_RS13955;Dbxref=Genbank:WP_000010129.1;Name=WP_000010129.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707298.1;locus_tag=PHA55_RS13955;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WP_000010129.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2859847	2860056	.	-	.	ID=gene-PHA55_RS13960;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=PHA55_RS13960;old_locus_tag=PHA55_13955
NZ_CP116044.1	Protein Homology	CDS	2859847	2860056	.	-	0	ID=cds-WP_001062678.1;Parent=gene-PHA55_RS13960;Dbxref=Genbank:WP_001062678.1;Name=WP_001062678.1;gbkey=CDS;gene=cspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=PHA55_RS13960;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_001062678.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2860069	2860212	.	-	.	ID=gene-PHA55_RS13965;Name=yobF;gbkey=Gene;gene=yobF;gene_biotype=protein_coding;locus_tag=PHA55_RS13965;old_locus_tag=PHA55_13960
NZ_CP116044.1	Protein Homology	CDS	2860069	2860212	.	-	0	ID=cds-WP_032279756.1;Parent=gene-PHA55_RS13965;Dbxref=Genbank:WP_032279756.1;Name=WP_032279756.1;gbkey=CDS;gene=yobF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416338.1;locus_tag=PHA55_RS13965;product=YobF family protein;protein_id=WP_032279756.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2860883	2861170	.	-	.	ID=gene-PHA55_RS13970;Name=yebO;gbkey=Gene;gene=yebO;gene_biotype=protein_coding;locus_tag=PHA55_RS13970;old_locus_tag=PHA55_13965
NZ_CP116044.1	Protein Homology	CDS	2860883	2861170	.	-	0	ID=cds-WP_001006866.1;Parent=gene-PHA55_RS13970;Dbxref=Genbank:WP_001006866.1;Name=WP_001006866.1;gbkey=CDS;gene=yebO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416339.1;locus_tag=PHA55_RS13970;product=YebO family protein;protein_id=WP_001006866.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2861245	2861388	.	-	.	ID=gene-PHA55_RS13975;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=PHA55_RS13975;old_locus_tag=PHA55_13970
NZ_CP116044.1	Protein Homology	CDS	2861245	2861388	.	-	0	ID=cds-WP_000714550.1;Parent=gene-PHA55_RS13975;Dbxref=Genbank:WP_000714550.1;Name=WP_000714550.1;gbkey=CDS;gene=mgrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416340.1;locus_tag=PHA55_RS13975;product=PhoP/PhoQ regulator MgrB;protein_id=WP_000714550.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2861547	2861786	.	+	.	ID=gene-PHA55_RS13980;Name=yobH;gbkey=Gene;gene=yobH;gene_biotype=protein_coding;locus_tag=PHA55_RS13980;old_locus_tag=PHA55_13975
NZ_CP116044.1	Protein Homology	CDS	2861547	2861786	.	+	0	ID=cds-WP_001211011.1;Parent=gene-PHA55_RS13980;Dbxref=Genbank:WP_001211011.1;Name=WP_001211011.1;gbkey=CDS;gene=yobH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588456.1;locus_tag=PHA55_RS13980;product=YobH family protein;protein_id=WP_001211011.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2861929	2862720	.	-	.	ID=gene-PHA55_RS13985;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=PHA55_RS13985;old_locus_tag=PHA55_13980
NZ_CP116044.1	Protein Homology	CDS	2861929	2862720	.	-	0	ID=cds-WP_001262174.1;Parent=gene-PHA55_RS13985;Dbxref=Genbank:WP_001262174.1;Name=WP_001262174.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310564.1;locus_tag=PHA55_RS13985;product=DNA-binding transcriptional regulator KdgR;protein_id=WP_001262174.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2862897	2864270	.	+	.	ID=gene-PHA55_RS13990;Name=yebQ;gbkey=Gene;gene=yebQ;gene_biotype=protein_coding;locus_tag=PHA55_RS13990;old_locus_tag=PHA55_13985
NZ_CP116044.1	Protein Homology	CDS	2862897	2864270	.	+	0	ID=cds-WP_001127216.1;Parent=gene-PHA55_RS13990;Dbxref=Genbank:WP_001127216.1;Name=WP_001127216.1;gbkey=CDS;gene=yebQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416342.4;locus_tag=PHA55_RS13990;product=MFS transporter;protein_id=WP_001127216.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2864316	2865197	.	-	.	ID=gene-PHA55_RS13995;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=PHA55_RS13995;old_locus_tag=PHA55_13990
NZ_CP116044.1	Protein Homology	CDS	2864316	2865197	.	-	0	ID=cds-WP_000984517.1;Parent=gene-PHA55_RS13995;Dbxref=Genbank:WP_000984517.1;Name=WP_000984517.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=PHA55_RS13995;product=protease HtpX;protein_id=WP_000984517.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2865389	2867437	.	-	.	ID=gene-PHA55_RS14000;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;locus_tag=PHA55_RS14000;old_locus_tag=PHA55_13995
NZ_CP116044.1	Protein Homology	CDS	2865389	2867437	.	-	0	ID=cds-WP_001315679.1;Parent=gene-PHA55_RS14000;Dbxref=Genbank:WP_001315679.1;Name=WP_001315679.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310567.1;locus_tag=PHA55_RS14000;product=carboxy terminal-processing peptidase;protein_id=WP_001315679.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2867457	2868155	.	-	.	ID=gene-PHA55_RS14005;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=PHA55_RS14005;old_locus_tag=PHA55_14000
NZ_CP116044.1	Protein Homology	CDS	2867457	2868155	.	-	0	ID=cds-WP_000431370.1;Parent=gene-PHA55_RS14005;Dbxref=Genbank:WP_000431370.1;Name=WP_000431370.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707288.3;locus_tag=PHA55_RS14005;product=RNA chaperone ProQ;protein_id=WP_000431370.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2868252	2868749	.	-	.	ID=gene-PHA55_RS14010;Name=msrC;gbkey=Gene;gene=msrC;gene_biotype=protein_coding;locus_tag=PHA55_RS14010;old_locus_tag=PHA55_14005
NZ_CP116044.1	Protein Homology	CDS	2868252	2868749	.	-	0	ID=cds-WP_001043882.1;Parent=gene-PHA55_RS14010;Dbxref=Genbank:WP_001043882.1;Name=WP_001043882.1;gbkey=CDS;gene=msrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707287.1;locus_tag=PHA55_RS14010;product=L-methionine (R)-S-oxide reductase;protein_id=WP_001043882.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2868879	2870162	.	+	.	ID=gene-PHA55_RS14015;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=PHA55_RS14015;old_locus_tag=PHA55_14010
NZ_CP116044.1	Protein Homology	CDS	2868879	2870162	.	+	0	ID=cds-WP_001207283.1;Parent=gene-PHA55_RS14015;Dbxref=Genbank:WP_001207283.1;Name=WP_001207283.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310570.1;locus_tag=PHA55_RS14015;product=membrane integrity lipid transport subunit YebS;protein_id=WP_001207283.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2870131	2872764	.	+	.	ID=gene-PHA55_RS14020;Name=yebT;gbkey=Gene;gene=yebT;gene_biotype=protein_coding;locus_tag=PHA55_RS14020;old_locus_tag=PHA55_14015
NZ_CP116044.1	Protein Homology	CDS	2870131	2872764	.	+	0	ID=cds-WP_001307250.1;Parent=gene-PHA55_RS14020;Dbxref=Genbank:WP_001307250.1;Name=WP_001307250.1;gbkey=CDS;gene=yebT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416348.2;locus_tag=PHA55_RS14020;product=lipid-binding membrane homeostasis protein YebT;protein_id=WP_001307250.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2872844	2874283	.	+	.	ID=gene-PHA55_RS14025;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=PHA55_RS14025;old_locus_tag=PHA55_14020
NZ_CP116044.1	Protein Homology	CDS	2872844	2874283	.	+	0	ID=cds-WP_001307251.1;Parent=gene-PHA55_RS14025;Dbxref=Genbank:WP_001307251.1;Name=WP_001307251.1;Ontology_term=GO:0001510,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmF;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416349.2;locus_tag=PHA55_RS14025;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=WP_001307251.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2874401	2874637	.	+	.	ID=gene-PHA55_RS14030;Name=yebV;gbkey=Gene;gene=yebV;gene_biotype=protein_coding;locus_tag=PHA55_RS14030;old_locus_tag=PHA55_14025
NZ_CP116044.1	Protein Homology	CDS	2874401	2874637	.	+	0	ID=cds-WP_001295499.1;Parent=gene-PHA55_RS14030;Dbxref=Genbank:WP_001295499.1;Name=WP_001295499.1;gbkey=CDS;gene=yebV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707284.2;locus_tag=PHA55_RS14030;product=YebV family protein;protein_id=WP_001295499.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2874742	2874933	.	+	.	ID=gene-PHA55_RS14035;Name=yebW;gbkey=Gene;gene=yebW;gene_biotype=protein_coding;locus_tag=PHA55_RS14035;old_locus_tag=PHA55_14030
NZ_CP116044.1	Protein Homology	CDS	2874742	2874933	.	+	0	ID=cds-WP_001296140.1;Parent=gene-PHA55_RS14035;Dbxref=Genbank:WP_001296140.1;Name=WP_001296140.1;gbkey=CDS;gene=yebW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416351.2;locus_tag=PHA55_RS14035;product=YebW family protein;protein_id=WP_001296140.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2874934	2875590	.	-	.	ID=gene-PHA55_RS14040;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=protein_coding;locus_tag=PHA55_RS14040;old_locus_tag=PHA55_14035
NZ_CP116044.1	Protein Homology	CDS	2874934	2875590	.	-	0	ID=cds-WP_000812724.1;Parent=gene-PHA55_RS14040;Dbxref=Genbank:WP_000812724.1;Name=WP_000812724.1;Ontology_term=GO:0016787;gbkey=CDS;gene=pphA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416352.4;locus_tag=PHA55_RS14040;product=protein-serine/threonine phosphatase;protein_id=WP_000812724.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2875986	2876327	.	-	.	ID=gene-PHA55_RS14045;Name=yebY;gbkey=Gene;gene=yebY;gene_biotype=protein_coding;locus_tag=PHA55_RS14045;old_locus_tag=PHA55_14040
NZ_CP116044.1	Protein Homology	CDS	2875986	2876327	.	-	0	ID=cds-WP_000976492.1;Parent=gene-PHA55_RS14045;Dbxref=Genbank:WP_000976492.1;Name=WP_000976492.1;gbkey=CDS;gene=yebY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310576.1;locus_tag=PHA55_RS14045;product=YebY family protein;protein_id=WP_000976492.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2876340	2877212	.	-	.	ID=gene-PHA55_RS14050;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=PHA55_RS14050;old_locus_tag=PHA55_14045
NZ_CP116044.1	Protein Homology	CDS	2876340	2877212	.	-	0	ID=cds-WP_000879285.1;Parent=gene-PHA55_RS14050;Dbxref=Genbank:WP_000879285.1;Name=WP_000879285.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416354.1;locus_tag=PHA55_RS14050;product=copper homeostasis membrane protein CopD;protein_id=WP_000879285.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2877216	2877590	.	-	.	ID=gene-PHA55_RS14055;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=PHA55_RS14055;old_locus_tag=PHA55_14050
NZ_CP116044.1	Protein Homology	CDS	2877216	2877590	.	-	0	ID=cds-WP_000204699.1;Parent=gene-PHA55_RS14055;Dbxref=Genbank:WP_000204699.1;Name=WP_000204699.1;Ontology_term=GO:0006825,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416355.1;locus_tag=PHA55_RS14055;product=CopC domain-containing protein YobA;protein_id=WP_000204699.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2877729	2877959	.	+	.	ID=gene-PHA55_RS14060;Name=holE;gbkey=Gene;gene=holE;gene_biotype=protein_coding;locus_tag=PHA55_RS14060;old_locus_tag=PHA55_14055
NZ_CP116044.1	Protein Homology	CDS	2877729	2877959	.	+	0	ID=cds-WP_000916763.1;Parent=gene-PHA55_RS14060;Dbxref=Genbank:WP_000916763.1;Name=WP_000916763.1;gbkey=CDS;gene=holE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310579.1;locus_tag=PHA55_RS14060;product=DNA polymerase III subunit theta;protein_id=WP_000916763.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2878061	2878717	.	+	.	ID=gene-PHA55_RS14065;Name=yobB;gbkey=Gene;gene=yobB;gene_biotype=protein_coding;locus_tag=PHA55_RS14065;old_locus_tag=PHA55_14060
NZ_CP116044.1	Protein Homology	CDS	2878061	2878717	.	+	0	ID=cds-WP_000011652.1;Parent=gene-PHA55_RS14065;Dbxref=Genbank:WP_000011652.1;Name=WP_000011652.1;gbkey=CDS;gene=yobB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416357.1;locus_tag=PHA55_RS14065;product=carbon-nitrogen hydrolase family protein YobB;protein_id=WP_000011652.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2878741	2879403	.	+	.	ID=gene-PHA55_RS14070;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=PHA55_RS14070;old_locus_tag=PHA55_14065
NZ_CP116044.1	Protein Homology	CDS	2878741	2879403	.	+	0	ID=cds-WP_000944256.1;Parent=gene-PHA55_RS14070;Dbxref=Genbank:WP_000944256.1;Name=WP_000944256.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416358.1;locus_tag=PHA55_RS14070;product=exodeoxyribonuclease X;protein_id=WP_000944256.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2879400	2881460	.	-	.	ID=gene-PHA55_RS14075;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;locus_tag=PHA55_RS14075;old_locus_tag=PHA55_14070
NZ_CP116044.1	Protein Homology	CDS	2879400	2881460	.	-	0	ID=cds-WP_000936915.1;Parent=gene-PHA55_RS14075;Dbxref=Genbank:WP_000936915.1;Name=WP_000936915.1;gbkey=CDS;gene=ptrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416359.1;locus_tag=PHA55_RS14075;product=oligopeptidase B;protein_id=WP_000936915.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2881669	2882328	.	-	.	ID=gene-PHA55_RS14080;Name=yebE;gbkey=Gene;gene=yebE;gene_biotype=protein_coding;locus_tag=PHA55_RS14080;old_locus_tag=PHA55_14075
NZ_CP116044.1	Protein Homology	CDS	2881669	2882328	.	-	0	ID=cds-WP_000024745.1;Parent=gene-PHA55_RS14080;Dbxref=Genbank:WP_000024745.1;Name=WP_000024745.1;gbkey=CDS;gene=yebE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310583.1;locus_tag=PHA55_RS14080;product=tellurite resistance TerB family protein;protein_id=WP_000024745.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2882655	2883011	.	-	.	ID=gene-PHA55_RS14085;Name=yebF;gbkey=Gene;gene=yebF;gene_biotype=protein_coding;locus_tag=PHA55_RS14085;old_locus_tag=PHA55_14080
NZ_CP116044.1	Protein Homology	CDS	2882655	2883011	.	-	0	ID=cds-WP_001295500.1;Parent=gene-PHA55_RS14085;Dbxref=Genbank:WP_001295500.1;Name=WP_001295500.1;gbkey=CDS;gene=yebF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310584.2;locus_tag=PHA55_RS14085;product=protein YebF;protein_id=WP_001295500.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2883078	2883368	.	-	.	ID=gene-PHA55_RS14090;Name=yebG;gbkey=Gene;gene=yebG;gene_biotype=protein_coding;locus_tag=PHA55_RS14090;old_locus_tag=PHA55_14085
NZ_CP116044.1	Protein Homology	CDS	2883078	2883368	.	-	0	ID=cds-WP_000257738.1;Parent=gene-PHA55_RS14090;Dbxref=Genbank:WP_000257738.1;Name=WP_000257738.1;gbkey=CDS;gene=yebG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310585.1;locus_tag=PHA55_RS14090;product=DNA damage-inducible protein YebG;protein_id=WP_000257738.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2883502	2884680	.	+	.	ID=gene-PHA55_RS14095;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=PHA55_RS14095;old_locus_tag=PHA55_14090
NZ_CP116044.1	Protein Homology	CDS	2883502	2884680	.	+	0	ID=cds-WP_000173511.1;Parent=gene-PHA55_RS14095;Dbxref=Genbank:WP_000173511.1;Name=WP_000173511.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310586.1;locus_tag=PHA55_RS14095;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_000173511.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2884736	2885377	.	-	.	ID=gene-PHA55_RS14100;Name=kdgA;gbkey=Gene;gene=kdgA;gene_biotype=protein_coding;gene_synonym=eda;locus_tag=PHA55_RS14100;old_locus_tag=PHA55_14095
NZ_CP116044.1	Protein Homology	CDS	2884736	2885377	.	-	0	ID=cds-WP_000800512.1;Parent=gene-PHA55_RS14100;Dbxref=Genbank:WP_000800512.1;Name=WP_000800512.1;gbkey=CDS;gene=kdgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310587.1;locus_tag=PHA55_RS14100;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_000800512.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2885414	2887225	.	-	.	ID=gene-PHA55_RS14105;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=PHA55_RS14105;old_locus_tag=PHA55_14100
NZ_CP116044.1	Protein Homology	CDS	2885414	2887225	.	-	0	ID=cds-WP_001069467.1;Parent=gene-PHA55_RS14105;Dbxref=Genbank:WP_001069467.1;Name=WP_001069467.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310588.1;locus_tag=PHA55_RS14105;product=phosphogluconate dehydratase;protein_id=WP_001069467.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2887460	2888935	.	-	.	ID=gene-PHA55_RS14110;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=PHA55_RS14110;old_locus_tag=PHA55_14105
NZ_CP116044.1	Protein Homology	CDS	2887460	2888935	.	-	0	ID=cds-WP_000301730.1;Parent=gene-PHA55_RS14110;Dbxref=Genbank:WP_000301730.1;Name=WP_000301730.1;Ontology_term=GO:0006098,GO:0004345;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=PHA55_RS14110;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000301730.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2889273	2890142	.	+	.	ID=gene-PHA55_RS14115;Name=hexR;gbkey=Gene;gene=hexR;gene_biotype=protein_coding;gene_synonym=yebK;locus_tag=PHA55_RS14115;old_locus_tag=PHA55_14110
NZ_CP116044.1	Protein Homology	CDS	2889273	2890142	.	+	0	ID=cds-WP_001056706.1;Parent=gene-PHA55_RS14115;Dbxref=Genbank:WP_001056706.1;Name=WP_001056706.1;gbkey=CDS;gene=hexR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416367.1;locus_tag=PHA55_RS14115;product=DNA-binding transcriptional regulator HexR;protein_id=WP_001056706.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2890270	2891712	.	+	.	ID=gene-PHA55_RS14120;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=PHA55_RS14120;old_locus_tag=PHA55_14115
NZ_CP116044.1	Protein Homology	CDS	2890270	2891712	.	+	0	ID=cds-WP_000091148.1;Parent=gene-PHA55_RS14120;Dbxref=Genbank:WP_000091148.1;Name=WP_000091148.1;Ontology_term=GO:0006096,GO:0004743,GO:0005737;gbkey=CDS;gene=pyk;go_component=cytoplasm|0005737||IEA;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=PHA55_RS14120;product=pyruvate kinase;protein_id=WP_000091148.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2891844	2892815	.	-	.	ID=gene-PHA55_RS14125;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=PHA55_RS14125;old_locus_tag=PHA55_14120
NZ_CP116044.1	Protein Homology	CDS	2891844	2892815	.	-	0	ID=cds-WP_000448381.1;Parent=gene-PHA55_RS14125;Dbxref=Genbank:WP_000448381.1;Name=WP_000448381.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009245,GO:0016746;gbkey=CDS;gene=lpxM;go_function=acyltransferase activity|0016746||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416369.1;locus_tag=PHA55_RS14125;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_000448381.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2892935	2894257	.	-	.	ID=gene-PHA55_RS14130;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=PHA55_RS14130;old_locus_tag=PHA55_14125
NZ_CP116044.1	Protein Homology	CDS	2892935	2894257	.	-	0	ID=cds-WP_001184045.1;Parent=gene-PHA55_RS14130;Dbxref=Genbank:WP_001184045.1;Name=WP_001184045.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707716.1;locus_tag=PHA55_RS14130;product=murein DD-endopeptidase MepM;protein_id=WP_001184045.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2894273	2895205	.	-	.	ID=gene-PHA55_RS14135;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=PHA55_RS14135;old_locus_tag=PHA55_14130
NZ_CP116044.1	Protein Homology	CDS	2894273	2895205	.	-	0	ID=cds-WP_001342995.1;Parent=gene-PHA55_RS14135;Dbxref=Genbank:WP_001342995.1;Name=WP_001342995.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416371.4;locus_tag=PHA55_RS14135;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_001342995.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2895284	2896039	.	+	.	ID=gene-PHA55_RS14140;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=PHA55_RS14140;old_locus_tag=PHA55_14135
NZ_CP116044.1	Protein Homology	CDS	2895284	2896039	.	+	0	ID=cds-WP_000202996.1;Parent=gene-PHA55_RS14140;Dbxref=Genbank:WP_000202996.1;Name=WP_000202996.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310595.1;locus_tag=PHA55_RS14140;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_000202996.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2896036	2896821	.	+	.	ID=gene-PHA55_RS14145;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=PHA55_RS14145;old_locus_tag=PHA55_14140
NZ_CP116044.1	Protein Homology	CDS	2896036	2896821	.	+	0	ID=cds-WP_000571465.1;Parent=gene-PHA55_RS14145;Dbxref=Genbank:WP_000571465.1;Name=WP_000571465.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416373.1;locus_tag=PHA55_RS14145;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_000571465.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2896968	2897978	.	-	.	ID=gene-PHA55_RS14150;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=PHA55_RS14150;old_locus_tag=PHA55_14145
NZ_CP116044.1	Protein Homology	CDS	2896968	2897978	.	-	0	ID=cds-WP_000568519.1;Parent=gene-PHA55_RS14150;Dbxref=Genbank:WP_000568519.1;Name=WP_000568519.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310597.1;locus_tag=PHA55_RS14150;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_000568519.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2897987	2898598	.	-	.	ID=gene-PHA55_RS14155;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=PHA55_RS14155;old_locus_tag=PHA55_14150
NZ_CP116044.1	Protein Homology	CDS	2897987	2898598	.	-	0	ID=cds-WP_000580323.1;Parent=gene-PHA55_RS14155;Dbxref=Genbank:WP_000580323.1;Name=WP_000580323.1;Ontology_term=GO:0006310,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=four-way junction helicase activity|0009378||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131997.1;locus_tag=PHA55_RS14155;product=Holliday junction branch migration protein RuvA;protein_id=WP_000580323.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2898737	2898802	.	-	.	ID=gene-PHA55_RS14160;Name=yobI;gbkey=Gene;gene=yobI;gene_biotype=protein_coding;locus_tag=PHA55_RS14160;old_locus_tag=PHA55_14155
NZ_CP116044.1	Protein Homology	CDS	2898737	2898802	.	-	0	ID=cds-WP_001386853.1;Parent=gene-PHA55_RS14160;Dbxref=Genbank:WP_001386853.1;Name=WP_001386853.1;gbkey=CDS;gene=yobI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791244.1;locus_tag=PHA55_RS14160;product=stress response small protein YobI;protein_id=WP_001386853.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2898873	2899475	.	+	.	ID=gene-PHA55_RS14165;Name=yebB;gbkey=Gene;gene=yebB;gene_biotype=protein_coding;locus_tag=PHA55_RS14165;old_locus_tag=PHA55_14160
NZ_CP116044.1	Protein Homology	CDS	2898873	2899475	.	+	0	ID=cds-WP_001024917.1;Parent=gene-PHA55_RS14165;Dbxref=Genbank:WP_001024917.1;Name=WP_001024917.1;gbkey=CDS;gene=yebB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416376.2;locus_tag=PHA55_RS14165;product=YebB family permuted papain-like enzyme;protein_id=WP_001024917.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2899477	2899998	.	-	.	ID=gene-PHA55_RS14170;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=PHA55_RS14170;old_locus_tag=PHA55_14165
NZ_CP116044.1	Protein Homology	CDS	2899477	2899998	.	-	0	ID=cds-WP_001295503.1;Parent=gene-PHA55_RS14170;Dbxref=Genbank:WP_001295503.1;Name=WP_001295503.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction endodeoxyribonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=PHA55_RS14170;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_001295503.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2900033	2900773	.	-	.	ID=gene-PHA55_RS14175;Name=yebC;gbkey=Gene;gene=yebC;gene_biotype=protein_coding;locus_tag=PHA55_RS14175;old_locus_tag=PHA55_14170
NZ_CP116044.1	Protein Homology	CDS	2900033	2900773	.	-	0	ID=cds-WP_000907248.1;Parent=gene-PHA55_RS14175;Dbxref=Genbank:WP_000907248.1;Name=WP_000907248.1;gbkey=CDS;gene=yebC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=PHA55_RS14175;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000907248.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2900802	2901254	.	-	.	ID=gene-PHA55_RS14180;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=PHA55_RS14180;old_locus_tag=PHA55_14175
NZ_CP116044.1	Protein Homology	CDS	2900802	2901254	.	-	0	ID=cds-WP_001443602.1;Parent=gene-PHA55_RS14180;Dbxref=Genbank:WP_001443602.1;Name=WP_001443602.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416379.1;locus_tag=PHA55_RS14180;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_001443602.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2901372	2903144	.	-	.	ID=gene-PHA55_RS14185;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=PHA55_RS14185;old_locus_tag=PHA55_14180
NZ_CP116044.1	Protein Homology	CDS	2901372	2903144	.	-	0	ID=cds-WP_001258662.1;Parent=gene-PHA55_RS14185;Dbxref=Genbank:WP_001258662.1;Name=WP_001258662.1;Ontology_term=GO:0006422,GO:0004815,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416380.1;locus_tag=PHA55_RS14185;product=aspartate--tRNA ligase;protein_id=WP_001258662.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2903454	2904020	.	+	.	ID=gene-PHA55_RS14190;Name=yecD;gbkey=Gene;gene=yecD;gene_biotype=protein_coding;locus_tag=PHA55_RS14190;old_locus_tag=PHA55_14185
NZ_CP116044.1	Protein Homology	CDS	2903454	2904020	.	+	0	ID=cds-WP_000891620.1;Parent=gene-PHA55_RS14190;Dbxref=Genbank:WP_000891620.1;Name=WP_000891620.1;gbkey=CDS;gene=yecD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416381.2;locus_tag=PHA55_RS14190;product=hydrolase;protein_id=WP_000891620.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2904017	2904835	.	+	.	ID=gene-PHA55_RS14195;Name=yecE;gbkey=Gene;gene=yecE;gene_biotype=protein_coding;locus_tag=PHA55_RS14195;old_locus_tag=PHA55_14190
NZ_CP116044.1	Protein Homology	CDS	2904017	2904835	.	+	0	ID=cds-WP_000639271.1;Parent=gene-PHA55_RS14195;Dbxref=Genbank:WP_000639271.1;Name=WP_000639271.1;gbkey=CDS;gene=yecE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416382.1;locus_tag=PHA55_RS14195;product=DUF72 domain-containing protein;protein_id=WP_000639271.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2904888	2905283	.	+	.	ID=gene-PHA55_RS14200;Name=yecN;gbkey=Gene;gene=yecN;gene_biotype=protein_coding;locus_tag=PHA55_RS14200;old_locus_tag=PHA55_14195
NZ_CP116044.1	Protein Homology	CDS	2904888	2905283	.	+	0	ID=cds-WP_000252979.1;Parent=gene-PHA55_RS14200;Dbxref=Genbank:WP_000252979.1;Name=WP_000252979.1;gbkey=CDS;gene=yecN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310606.2;locus_tag=PHA55_RS14200;product=MAPEG family protein;protein_id=WP_000252979.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2905324	2906067	.	+	.	ID=gene-PHA55_RS14205;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=PHA55_RS14205;old_locus_tag=PHA55_14200
NZ_CP116044.1	Protein Homology	CDS	2905324	2906067	.	+	0	ID=cds-WP_000019584.1;Parent=gene-PHA55_RS14205;Dbxref=Genbank:WP_000019584.1;Name=WP_000019584.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310607.1;locus_tag=PHA55_RS14205;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_000019584.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2906064	2907035	.	+	.	ID=gene-PHA55_RS14210;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=PHA55_RS14210;old_locus_tag=PHA55_14205
NZ_CP116044.1	Protein Homology	CDS	2906064	2907035	.	+	0	ID=cds-WP_000564745.1;Parent=gene-PHA55_RS14210;Dbxref=Genbank:WP_000564745.1;Name=WP_000564745.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707759.1;locus_tag=PHA55_RS14210;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_000564745.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2907200	2909629	.	-	.	ID=gene-PHA55_RS14215;Name=torZ;gbkey=Gene;gene=torZ;gene_biotype=protein_coding;locus_tag=PHA55_RS14215;old_locus_tag=PHA55_14210
NZ_CP116044.1	Protein Homology	CDS	2907200	2909629	.	-	0	ID=cds-WP_001593402.1;Parent=gene-PHA55_RS14215;Dbxref=Genbank:WP_001593402.1;Name=WP_001593402.1;gbkey=CDS;gene=torZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310609.2;locus_tag=PHA55_RS14215;product=trimethylamine N-oxide reductase TorZ;protein_id=WP_001593402.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2909654	2910754	.	-	.	ID=gene-PHA55_RS14220;Name=torY;gbkey=Gene;gene=torY;gene_biotype=protein_coding;locus_tag=PHA55_RS14220;old_locus_tag=PHA55_14215
NZ_CP116044.1	Protein Homology	CDS	2909654	2910754	.	-	0	ID=cds-WP_271287441.1;Parent=gene-PHA55_RS14220;Dbxref=Genbank:WP_271287441.1;Name=WP_271287441.1;gbkey=CDS;gene=torY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707761.2;locus_tag=PHA55_RS14220;product=NapC/NirT family cytochrome c;protein_id=WP_271287441.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2911142	2911888	.	-	.	ID=gene-PHA55_RS14225;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=PHA55_RS14225;old_locus_tag=PHA55_14220
NZ_CP116044.1	Protein Homology	CDS	2911142	2911888	.	-	0	ID=cds-WP_001185741.1;Parent=gene-PHA55_RS14225;Dbxref=Genbank:WP_001185741.1;Name=WP_001185741.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025309.2;locus_tag=PHA55_RS14225;product=copper homeostasis protein CutC;protein_id=WP_001185741.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2911902	2912468	.	-	.	ID=gene-PHA55_RS14230;Name=yecM;gbkey=Gene;gene=yecM;gene_biotype=protein_coding;locus_tag=PHA55_RS14230;old_locus_tag=PHA55_14225
NZ_CP116044.1	Protein Homology	CDS	2911902	2912468	.	-	0	ID=cds-WP_001300190.1;Parent=gene-PHA55_RS14230;Dbxref=Genbank:WP_001300190.1;Name=WP_001300190.1;gbkey=CDS;gene=yecM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310612.2;locus_tag=PHA55_RS14230;product=VOC family protein;protein_id=WP_001300190.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2912684	2914417	.	+	.	ID=gene-PHA55_RS14235;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=PHA55_RS14235;old_locus_tag=PHA55_14230
NZ_CP116044.1	Protein Homology	CDS	2912684	2914417	.	+	0	ID=cds-WP_001025326.1;Parent=gene-PHA55_RS14235;Dbxref=Genbank:WP_001025326.1;Name=WP_001025326.1;Ontology_term=GO:0006420,GO:0004814,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=PHA55_RS14235;product=arginine--tRNA ligase;protein_id=WP_001025326.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2914459	2914503	.	-	.	ID=gene-PHA55_RS14240;Name=yecV;gbkey=Gene;gene=yecV;gene_biotype=protein_coding;locus_tag=PHA55_RS14240;old_locus_tag=PHA55_14235
NZ_CP116044.1	Protein Homology	CDS	2914459	2914503	.	-	0	ID=cds-WP_211180499.1;Parent=gene-PHA55_RS14240;Dbxref=Genbank:WP_211180499.1;Name=WP_211180499.1;gbkey=CDS;gene=yecV;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051188.1;locus_tag=PHA55_RS14240;product=protein YecV;protein_id=WP_211180499.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2914594	2915082	.	+	.	ID=gene-PHA55_RS14245;Name=yecT;gbkey=Gene;gene=yecT;gene_biotype=protein_coding;locus_tag=PHA55_RS14245;old_locus_tag=PHA55_14240
NZ_CP116044.1	Protein Homology	CDS	2914594	2915082	.	+	0	ID=cds-WP_001315683.1;Parent=gene-PHA55_RS14245;Dbxref=Genbank:WP_001315683.1;Name=WP_001315683.1;gbkey=CDS;gene=yecT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416391.4;locus_tag=PHA55_RS14245;product=lysozyme inhibitor LprI family protein;protein_id=WP_001315683.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2915202	2915594	.	-	.	ID=gene-PHA55_RS14250;Name=flhe;gbkey=Gene;gene=flhe;gene_biotype=protein_coding;locus_tag=PHA55_RS14250;old_locus_tag=PHA55_14245
NZ_CP116044.1	Protein Homology	CDS	2915202	2915594	.	-	0	ID=cds-WP_001259583.1;Parent=gene-PHA55_RS14250;Dbxref=Genbank:WP_001259583.1;Name=WP_001259583.1;gbkey=CDS;gene=flhe;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416392.1;locus_tag=PHA55_RS14250;product=flagellar protein FlhE;protein_id=WP_001259583.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2915594	2917672	.	-	.	ID=gene-PHA55_RS14255;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=PHA55_RS14255;old_locus_tag=PHA55_14250
NZ_CP116044.1	Protein Homology	CDS	2915594	2917672	.	-	0	ID=cds-WP_000066983.1;Parent=gene-PHA55_RS14255;Dbxref=Genbank:WP_000066983.1;Name=WP_000066983.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=flhA;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416393.1;locus_tag=PHA55_RS14255;product=flagellar biosynthesis protein FlhA;protein_id=WP_000066983.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2917665	2918813	.	-	.	ID=gene-PHA55_RS14260;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=PHA55_RS14260;old_locus_tag=PHA55_14255
NZ_CP116044.1	Protein Homology	CDS	2917665	2918813	.	-	0	ID=cds-WP_001278954.1;Parent=gene-PHA55_RS14260;Dbxref=Genbank:WP_001278954.1;Name=WP_001278954.1;Ontology_term=GO:0001539;gbkey=CDS;gene=flhB;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416394.1;locus_tag=PHA55_RS14260;product=flagellar biosynthesis protein FlhB;protein_id=WP_001278954.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2919015	2919659	.	-	.	ID=gene-PHA55_RS14265;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=PHA55_RS14265;old_locus_tag=PHA55_14260
NZ_CP116044.1	Protein Homology	CDS	2919015	2919659	.	-	0	ID=cds-WP_000983609.1;Parent=gene-PHA55_RS14265;Dbxref=Genbank:WP_000983609.1;Name=WP_000983609.1;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416395.1;locus_tag=PHA55_RS14265;product=protein phosphatase CheZ;protein_id=WP_000983609.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2919670	2920059	.	-	.	ID=gene-PHA55_RS14270;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=PHA55_RS14270;old_locus_tag=PHA55_14265
NZ_CP116044.1	Protein Homology	CDS	2919670	2920059	.	-	0	ID=cds-WP_000763867.1;Parent=gene-PHA55_RS14270;Dbxref=Genbank:WP_000763867.1;Name=WP_000763867.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210873.1;locus_tag=PHA55_RS14270;product=chemotaxis response regulator CheY;protein_id=WP_000763867.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2920074	2921123	.	-	.	ID=gene-PHA55_RS14275;Name=cheB;gbkey=Gene;gene=cheB;gene_biotype=protein_coding;locus_tag=PHA55_RS14275;old_locus_tag=PHA55_14270
NZ_CP116044.1	Protein Homology	CDS	2920074	2921123	.	-	0	ID=cds-WP_000036378.1;Parent=gene-PHA55_RS14275;Dbxref=Genbank:WP_000036378.1;Name=WP_000036378.1;gbkey=CDS;gene=cheB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=PHA55_RS14275;product=protein-glutamate methylesterase/protein glutamine deamidase;protein_id=WP_000036378.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2921126	2921986	.	-	.	ID=gene-PHA55_RS14280;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=PHA55_RS14280;old_locus_tag=PHA55_14275
NZ_CP116044.1	Protein Homology	CDS	2921126	2921986	.	-	0	ID=cds-WP_000204339.1;Parent=gene-PHA55_RS14280;Dbxref=Genbank:WP_000204339.1;Name=WP_000204339.1;Ontology_term=GO:0008757;gbkey=CDS;gene=cheR;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416398.1;locus_tag=PHA55_RS14280;product=protein-glutamate O-methyltransferase CheR;protein_id=WP_000204339.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2922005	2923606	.	-	.	ID=gene-PHA55_RS14285;Name=tap;gbkey=Gene;gene=tap;gene_biotype=protein_coding;locus_tag=PHA55_RS14285;old_locus_tag=PHA55_14280
NZ_CP116044.1	Protein Homology	CDS	2922005	2923606	.	-	0	ID=cds-WP_260589806.1;Parent=gene-PHA55_RS14285;Dbxref=Genbank:WP_260589806.1;Name=WP_260589806.1;gbkey=CDS;gene=tap;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416399.1;locus_tag=PHA55_RS14285;product=methyl-accepting chemotaxis protein IV;protein_id=WP_260589806.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2923652	2925313	.	-	.	ID=gene-PHA55_RS14290;Name=tar;gbkey=Gene;gene=tar;gene_biotype=protein_coding;locus_tag=PHA55_RS14290;old_locus_tag=PHA55_14285
NZ_CP116044.1	Protein Homology	CDS	2923652	2925313	.	-	0	ID=cds-WP_001297437.1;Parent=gene-PHA55_RS14290;Dbxref=Genbank:WP_001297437.1;Name=WP_001297437.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tar;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416400.1;locus_tag=PHA55_RS14290;product=methyl-accepting chemotaxis protein II;protein_id=WP_001297437.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2925458	2925961	.	-	.	ID=gene-PHA55_RS14295;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=PHA55_RS14295;old_locus_tag=PHA55_14290
NZ_CP116044.1	Protein Homology	CDS	2925458	2925961	.	-	0	ID=cds-WP_000147302.1;Parent=gene-PHA55_RS14295;Dbxref=Genbank:WP_000147302.1;Name=WP_000147302.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310624.1;locus_tag=PHA55_RS14295;product=chemotaxis protein CheW;protein_id=WP_000147302.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2925982	2927946	.	-	.	ID=gene-PHA55_RS14300;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=PHA55_RS14300;old_locus_tag=PHA55_14295
NZ_CP116044.1	Protein Homology	CDS	2925982	2927946	.	-	0	ID=cds-WP_001356136.1;Parent=gene-PHA55_RS14300;Dbxref=Genbank:WP_001356136.1;Name=WP_001356136.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310625.1;locus_tag=PHA55_RS14300;product=chemotaxis protein CheA;protein_id=WP_001356136.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2927951	2928877	.	-	.	ID=gene-PHA55_RS14305;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=PHA55_RS14305;old_locus_tag=PHA55_14300
NZ_CP116044.1	Protein Homology	CDS	2927951	2928877	.	-	0	ID=cds-WP_000795622.1;Parent=gene-PHA55_RS14305;Dbxref=Genbank:WP_000795622.1;Name=WP_000795622.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310626.1;locus_tag=PHA55_RS14305;product=flagellar motor protein MotB;protein_id=WP_000795622.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2928874	2929761	.	-	.	ID=gene-PHA55_RS14310;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=PHA55_RS14310;old_locus_tag=PHA55_14305
NZ_CP116044.1	Protein Homology	CDS	2928874	2929761	.	-	0	ID=cds-WP_000906340.1;Parent=gene-PHA55_RS14310;Dbxref=Genbank:WP_000906340.1;Name=WP_000906340.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416404.1;locus_tag=PHA55_RS14310;product=flagellar motor stator protein MotA;protein_id=WP_000906340.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2929888	2930466	.	-	.	ID=gene-PHA55_RS14315;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=PHA55_RS14315;old_locus_tag=PHA55_14310
NZ_CP116044.1	Protein Homology	CDS	2929888	2930466	.	-	0	ID=cds-WP_001291603.1;Parent=gene-PHA55_RS14315;Dbxref=Genbank:WP_001291603.1;Name=WP_001291603.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310628.1;locus_tag=PHA55_RS14315;product=flagellar transcriptional regulator FlhC;protein_id=WP_001291603.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2930469	2930819	.	-	.	ID=gene-PHA55_RS14320;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=PHA55_RS14320;old_locus_tag=PHA55_14315
NZ_CP116044.1	Protein Homology	CDS	2930469	2930819	.	-	0	ID=cds-WP_001295647.1;Parent=gene-PHA55_RS14320;Dbxref=Genbank:WP_001295647.1;Name=WP_001295647.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416406.4;locus_tag=PHA55_RS14320;product=flagellar transcriptional regulator FlhD;protein_id=WP_001295647.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2931599	2932027	.	+	.	ID=gene-PHA55_RS14325;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=PHA55_RS14325;old_locus_tag=PHA55_14320
NZ_CP116044.1	Protein Homology	CDS	2931599	2932027	.	+	0	ID=cds-WP_000122426.1;Parent=gene-PHA55_RS14325;Dbxref=Genbank:WP_000122426.1;Name=WP_000122426.1;gbkey=CDS;gene=uspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416409.1;locus_tag=PHA55_RS14325;product=universal stress protein UspC;protein_id=WP_000122426.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2932034	2933458	.	-	.	ID=gene-PHA55_RS14330;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=PHA55_RS14330;old_locus_tag=PHA55_14325
NZ_CP116044.1	Protein Homology	CDS	2932034	2933458	.	-	0	ID=cds-WP_001295646.1;Parent=gene-PHA55_RS14330;Dbxref=Genbank:WP_001295646.1;Name=WP_001295646.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416410.1;locus_tag=PHA55_RS14330;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=WP_001295646.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2933433	2934233	.	-	.	ID=gene-PHA55_RS14335;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=PHA55_RS14335;old_locus_tag=PHA55_14330
NZ_CP116044.1	Protein Homology	CDS	2933433	2934233	.	-	0	ID=cds-WP_001295645.1;Parent=gene-PHA55_RS14335;Dbxref=Genbank:WP_001295645.1;Name=WP_001295645.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416411.1;locus_tag=PHA55_RS14335;product=trehalose-phosphatase;protein_id=WP_001295645.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2934400	2935386	.	-	.	ID=gene-PHA55_RS14340;Name=araH;gbkey=Gene;gene=araH;gene_biotype=protein_coding;locus_tag=PHA55_RS14340;old_locus_tag=PHA55_14335
NZ_CP116044.1	Protein Homology	CDS	2934400	2935386	.	-	0	ID=cds-WP_000100203.1;Parent=gene-PHA55_RS14340;Dbxref=Genbank:WP_000100203.1;Name=WP_000100203.1;gbkey=CDS;gene=araH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026162.2;locus_tag=PHA55_RS14340;product=arabinose ABC transporter permease AraH;protein_id=WP_000100203.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2935401	2936915	.	-	.	ID=gene-PHA55_RS14345;Name=araG;gbkey=Gene;gene=araG;gene_biotype=protein_coding;locus_tag=PHA55_RS14345;old_locus_tag=PHA55_14340
NZ_CP116044.1	Protein Homology	CDS	2935401	2936915	.	-	0	ID=cds-WP_001187810.1;Parent=gene-PHA55_RS14345;Dbxref=Genbank:WP_001187810.1;Name=WP_001187810.1;gbkey=CDS;gene=araG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127704.1;locus_tag=PHA55_RS14345;product=arabinose ABC transporter ATP-binding protein AraG;protein_id=WP_001187810.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2936985	2937974	.	-	.	ID=gene-PHA55_RS14350;Name=araF;gbkey=Gene;gene=araF;gene_biotype=protein_coding;locus_tag=PHA55_RS14350;old_locus_tag=PHA55_14345
NZ_CP116044.1	Protein Homology	CDS	2936985	2937974	.	-	0	ID=cds-WP_000548675.1;Parent=gene-PHA55_RS14350;Dbxref=Genbank:WP_000548675.1;Name=WP_000548675.1;gbkey=CDS;gene=araF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416414.1;locus_tag=PHA55_RS14350;product=arabinose ABC transporter substrate-binding protein AraF;protein_id=WP_000548675.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2938771	2939274	.	+	.	ID=gene-PHA55_RS14355;Name=ftnB;gbkey=Gene;gene=ftnB;gene_biotype=protein_coding;locus_tag=PHA55_RS14355;old_locus_tag=PHA55_14350
NZ_CP116044.1	Protein Homology	CDS	2938771	2939274	.	+	0	ID=cds-WP_000179469.1;Parent=gene-PHA55_RS14355;Dbxref=Genbank:WP_000179469.1;Name=WP_000179469.1;gbkey=CDS;gene=ftnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310637.1;locus_tag=PHA55_RS14355;product=non-heme ferritin-like protein;protein_id=WP_000179469.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2939353	2939604	.	-	.	ID=gene-PHA55_RS14360;Name=yecJ;gbkey=Gene;gene=yecJ;gene_biotype=protein_coding;locus_tag=PHA55_RS14360;old_locus_tag=PHA55_14355
NZ_CP116044.1	Protein Homology	CDS	2939353	2939604	.	-	0	ID=cds-WP_000082127.1;Parent=gene-PHA55_RS14360;Dbxref=Genbank:WP_000082127.1;Name=WP_000082127.1;gbkey=CDS;gene=yecJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416416.2;locus_tag=PHA55_RS14360;product=DUF2766 family protein YecJ;protein_id=WP_000082127.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2939719	2939805	.	-	.	ID=gene-PHA55_RS14365;Name=azuC;gbkey=Gene;gene=azuC;gene_biotype=protein_coding;locus_tag=PHA55_RS14365;old_locus_tag=PHA55_14360
NZ_CP116044.1	Protein Homology	CDS	2939719	2939805	.	-	0	ID=cds-WP_010723106.1;Parent=gene-PHA55_RS14365;Dbxref=Genbank:WP_010723106.1;Name=WP_010723106.1;gbkey=CDS;gene=azuC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791245.1;locus_tag=PHA55_RS14365;product=stress response protein AzuC;protein_id=WP_010723106.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2940063	2940386	.	+	.	ID=gene-PHA55_RS14370;Name=yecR;gbkey=Gene;gene=yecR;gene_biotype=protein_coding;locus_tag=PHA55_RS14370;old_locus_tag=PHA55_14365
NZ_CP116044.1	Protein Homology	CDS	2940063	2940386	.	+	0	ID=cds-WP_001237869.1;Parent=gene-PHA55_RS14370;Dbxref=Genbank:WP_001237869.1;Name=WP_001237869.1;gbkey=CDS;gene=yecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416417.1;locus_tag=PHA55_RS14370;product=YecR-like lipofamily protein;protein_id=WP_001237869.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2940557	2941054	.	+	.	ID=gene-PHA55_RS14375;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=PHA55_RS14375;old_locus_tag=PHA55_14370
NZ_CP116044.1	Protein Homology	CDS	2940557	2941054	.	+	0	ID=cds-WP_000917208.1;Parent=gene-PHA55_RS14375;Dbxref=Genbank:WP_000917208.1;Name=WP_000917208.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=cellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310640.1;locus_tag=PHA55_RS14375;product=non-heme ferritin;protein_id=WP_000917208.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2941092	2941331	.	-	.	ID=gene-PHA55_RS14380;Name=yecH;gbkey=Gene;gene=yecH;gene_biotype=protein_coding;locus_tag=PHA55_RS14380;old_locus_tag=PHA55_14375
NZ_CP116044.1	Protein Homology	CDS	2941092	2941331	.	-	0	ID=cds-WP_000377225.1;Parent=gene-PHA55_RS14380;Dbxref=Genbank:WP_000377225.1;Name=WP_000377225.1;gbkey=CDS;gene=yecH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416419.1;locus_tag=PHA55_RS14380;product=YecH family protein;protein_id=WP_000377225.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2941522	2942733	.	+	.	ID=gene-PHA55_RS14385;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=PHA55_RS14385;old_locus_tag=PHA55_14380
NZ_CP116044.1	Protein Homology	CDS	2941522	2942733	.	+	0	ID=cds-WP_000797560.1;Parent=gene-PHA55_RS14385;Dbxref=Genbank:WP_000797560.1;Name=WP_000797560.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=tyrP;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416420.1;locus_tag=PHA55_RS14385;product=tyrosine transporter TyrP;protein_id=WP_000797560.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2942795	2943460	.	-	.	ID=gene-PHA55_RS14390;Name=yecA;gbkey=Gene;gene=yecA;gene_biotype=protein_coding;locus_tag=PHA55_RS14390;old_locus_tag=PHA55_14385
NZ_CP116044.1	Protein Homology	CDS	2942795	2943460	.	-	0	ID=cds-WP_000847902.1;Parent=gene-PHA55_RS14390;Dbxref=Genbank:WP_000847902.1;Name=WP_000847902.1;gbkey=CDS;gene=yecA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416421.1;locus_tag=PHA55_RS14390;product=UPF0149 family protein YecA;protein_id=WP_000847902.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2943656	2943742	.	-	.	ID=gene-PHA55_RS14395;Name=PHA55_RS14395;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS14395;old_locus_tag=PHA55_14390
NZ_CP116044.1	tRNAscan-SE	tRNA	2943656	2943742	.	-	.	ID=rna-PHA55_RS14395;Parent=gene-PHA55_RS14395;anticodon=(pos:complement(2943706..2943708));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS14395;product=tRNA-Leu
NZ_CP116044.1	tRNAscan-SE	exon	2943656	2943742	.	-	.	ID=exon-PHA55_RS14395-1;Parent=rna-PHA55_RS14395;anticodon=(pos:complement(2943706..2943708));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS14395;product=tRNA-Leu
NZ_CP116044.1	RefSeq	gene	2943755	2943828	.	-	.	ID=gene-PHA55_RS14400;Name=PHA55_RS14400;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS14400;old_locus_tag=PHA55_14395
NZ_CP116044.1	tRNAscan-SE	tRNA	2943755	2943828	.	-	.	ID=rna-PHA55_RS14400;Parent=gene-PHA55_RS14400;anticodon=(pos:complement(2943794..2943796));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS14400;product=tRNA-Cys
NZ_CP116044.1	tRNAscan-SE	exon	2943755	2943828	.	-	.	ID=exon-PHA55_RS14400-1;Parent=rna-PHA55_RS14400;anticodon=(pos:complement(2943794..2943796));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS14400;product=tRNA-Cys
NZ_CP116044.1	RefSeq	gene	2943883	2943958	.	-	.	ID=gene-PHA55_RS14405;Name=PHA55_RS14405;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS14405;old_locus_tag=PHA55_14400
NZ_CP116044.1	tRNAscan-SE	tRNA	2943883	2943958	.	-	.	ID=rna-PHA55_RS14405;Parent=gene-PHA55_RS14405;anticodon=(pos:complement(2943923..2943925));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS14405;product=tRNA-Gly
NZ_CP116044.1	tRNAscan-SE	exon	2943883	2943958	.	-	.	ID=exon-PHA55_RS14405-1;Parent=rna-PHA55_RS14405;anticodon=(pos:complement(2943923..2943925));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS14405;product=tRNA-Gly
NZ_CP116044.1	RefSeq	gene	2944110	2944658	.	-	.	ID=gene-PHA55_RS14410;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=PHA55_RS14410;old_locus_tag=PHA55_14405
NZ_CP116044.1	Protein Homology	CDS	2944110	2944658	.	-	0	ID=cds-WP_001160187.1;Parent=gene-PHA55_RS14410;Dbxref=Genbank:WP_001160187.1;Name=WP_001160187.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310677.1;locus_tag=PHA55_RS14410;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_001160187.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2944715	2946547	.	-	.	ID=gene-PHA55_RS14415;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=PHA55_RS14415;old_locus_tag=PHA55_14410
NZ_CP116044.1	Protein Homology	CDS	2944715	2946547	.	-	0	ID=cds-WP_001283421.1;Parent=gene-PHA55_RS14415;Dbxref=Genbank:WP_001283421.1;Name=WP_001283421.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310678.2;locus_tag=PHA55_RS14415;product=excinuclease ABC subunit UvrC;protein_id=WP_001283421.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2946544	2947200	.	-	.	ID=gene-PHA55_RS14420;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=PHA55_RS14420;old_locus_tag=PHA55_14415
NZ_CP116044.1	Protein Homology	CDS	2946544	2947200	.	-	0	ID=cds-WP_260589808.1;Parent=gene-PHA55_RS14420;Dbxref=Genbank:WP_260589808.1;Name=WP_260589808.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416424.1;locus_tag=PHA55_RS14420;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WP_260589808.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2947496	2947672	.	+	.	ID=gene-PHA55_RS14425;Name=yecU;gbkey=Gene;gene=yecU;gene_biotype=protein_coding;locus_tag=PHA55_RS14425;old_locus_tag=PHA55_14420
NZ_CP116044.1	Protein Homology	CDS	2947496	2947672	.	+	0	ID=cds-WP_000590347.1;Parent=gene-PHA55_RS14425;Dbxref=Genbank:WP_000590347.1;Name=WP_000590347.1;gbkey=CDS;gene=yecU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518796.1;locus_tag=PHA55_RS14425;product=protein YecU;protein_id=WP_000590347.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2947659	2947883	.	+	.	ID=gene-PHA55_RS14430;Name=yecF;gbkey=Gene;gene=yecF;gene_biotype=protein_coding;locus_tag=PHA55_RS14430;old_locus_tag=PHA55_14425
NZ_CP116044.1	Protein Homology	CDS	2947659	2947883	.	+	0	ID=cds-WP_000106474.1;Parent=gene-PHA55_RS14430;Dbxref=Genbank:WP_000106474.1;Name=WP_000106474.1;gbkey=CDS;gene=yecF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416425.1;locus_tag=PHA55_RS14430;product=DUF2594 family protein YecF;protein_id=WP_000106474.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2947950	2948672	.	-	.	ID=gene-PHA55_RS14435;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;locus_tag=PHA55_RS14435;old_locus_tag=PHA55_14430
NZ_CP116044.1	Protein Homology	CDS	2947950	2948672	.	-	0	ID=cds-WP_001154271.1;Parent=gene-PHA55_RS14435;Dbxref=Genbank:WP_001154271.1;Name=WP_001154271.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=sdiA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310681.1;locus_tag=PHA55_RS14435;product=transcriptional regulator SdiA;protein_id=WP_001154271.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2948902	2949654	.	-	.	ID=gene-PHA55_RS14440;Name=yecC;gbkey=Gene;gene=yecC;gene_biotype=protein_coding;locus_tag=PHA55_RS14440;old_locus_tag=PHA55_14435
NZ_CP116044.1	Protein Homology	CDS	2948902	2949654	.	-	0	ID=cds-WP_001272994.1;Parent=gene-PHA55_RS14440;Dbxref=Genbank:WP_001272994.1;Name=WP_001272994.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=yecC;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416427.1;locus_tag=PHA55_RS14440;product=L-cystine ABC transporter ATP-binding protein YecC;protein_id=WP_001272994.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2949651	2950319	.	-	.	ID=gene-PHA55_RS14445;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=PHA55_RS14445;old_locus_tag=PHA55_14440
NZ_CP116044.1	Protein Homology	CDS	2949651	2950319	.	-	0	ID=cds-WP_001158220.1;Parent=gene-PHA55_RS14445;Dbxref=Genbank:WP_001158220.1;Name=WP_001158220.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416428.1;locus_tag=PHA55_RS14445;product=cystine ABC transporter permease;protein_id=WP_001158220.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2950334	2951320	.	-	.	ID=gene-PHA55_RS14450;Name=dcyD;gbkey=Gene;gene=dcyD;gene_biotype=protein_coding;locus_tag=PHA55_RS14450;old_locus_tag=PHA55_14445
NZ_CP116044.1	Protein Homology	CDS	2950334	2951320	.	-	0	ID=cds-WP_001128215.1;Parent=gene-PHA55_RS14450;Dbxref=Genbank:WP_001128215.1;Name=WP_001128215.1;Ontology_term=GO:0019148;gbkey=CDS;gene=dcyD;go_function=D-cysteine desulfhydrase activity|0019148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416429.4;locus_tag=PHA55_RS14450;product=D-cysteine desulfhydrase;protein_id=WP_001128215.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2951425	2952225	.	-	.	ID=gene-PHA55_RS14455;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=PHA55_RS14455;old_locus_tag=PHA55_14450
NZ_CP116044.1	Protein Homology	CDS	2951425	2952225	.	-	0	ID=cds-WP_001295643.1;Parent=gene-PHA55_RS14455;Dbxref=Genbank:WP_001295643.1;Name=WP_001295643.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416430.1;locus_tag=PHA55_RS14455;product=cystine ABC transporter substrate-binding protein;protein_id=WP_001295643.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2952313	2952864	.	-	.	ID=gene-PHA55_RS14460;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=PHA55_RS14460;old_locus_tag=PHA55_14455
NZ_CP116044.1	Protein Homology	CDS	2952313	2952864	.	-	0	ID=cds-WP_001344677.1;Parent=gene-PHA55_RS14460;Dbxref=Genbank:WP_001344677.1;Name=WP_001344677.1;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310687.2;locus_tag=PHA55_RS14460;product=flagella biosynthesis regulatory protein FliZ;protein_id=WP_001344677.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2952910	2953629	.	-	.	ID=gene-PHA55_RS14465;Name=fliA;gbkey=Gene;gene=fliA;gene_biotype=protein_coding;locus_tag=PHA55_RS14465;old_locus_tag=PHA55_14460
NZ_CP116044.1	Protein Homology	CDS	2952910	2953629	.	-	0	ID=cds-WP_001087467.1;Parent=gene-PHA55_RS14465;Dbxref=Genbank:WP_001087467.1;Name=WP_001087467.1;gbkey=CDS;gene=fliA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310688.1;locus_tag=PHA55_RS14465;product=RNA polymerase sigma factor FliA;protein_id=WP_001087467.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2953794	2955272	.	-	.	ID=gene-PHA55_RS14470;Name=PHA55_RS14470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS14470;old_locus_tag=PHA55_14465
NZ_CP116044.1	Protein Homology	CDS	2953794	2955272	.	-	0	ID=cds-WP_000079816.1;Parent=gene-PHA55_RS14470;Dbxref=Genbank:WP_000079816.1;Name=WP_000079816.1;Ontology_term=GO:0071973,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000079837.1;locus_tag=PHA55_RS14470;product=flagellin;protein_id=WP_000079816.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2955527	2956939	.	+	.	ID=gene-PHA55_RS14475;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=PHA55_RS14475;old_locus_tag=PHA55_14470
NZ_CP116044.1	Protein Homology	CDS	2955527	2956939	.	+	0	ID=cds-WP_000146097.1;Parent=gene-PHA55_RS14475;Dbxref=Genbank:WP_000146097.1;Name=WP_000146097.1;Ontology_term=GO:0007155,GO:0009288,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA,bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001616262.1;locus_tag=PHA55_RS14475;product=flagellar filament capping protein FliD;protein_id=WP_000146097.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2956954	2957364	.	+	.	ID=gene-PHA55_RS14480;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=PHA55_RS14480;old_locus_tag=PHA55_14475
NZ_CP116044.1	Protein Homology	CDS	2956954	2957364	.	+	0	ID=cds-WP_260589809.1;Parent=gene-PHA55_RS14480;Dbxref=Genbank:WP_260589809.1;Name=WP_260589809.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliS;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310691.1;locus_tag=PHA55_RS14480;product=flagellar export chaperone FliS;protein_id=WP_260589809.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2957364	2957729	.	+	.	ID=gene-PHA55_RS14485;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=PHA55_RS14485;old_locus_tag=PHA55_14480
NZ_CP116044.1	Protein Homology	CDS	2957364	2957729	.	+	0	ID=cds-WP_001015028.1;Parent=gene-PHA55_RS14485;Dbxref=Genbank:WP_001015028.1;Name=WP_001015028.1;Ontology_term=GO:0006605,GO:0044780,GO:1902209;gbkey=CDS;gene=fliT;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA,negative regulation of bacterial-type flagellum assembly|1902209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001015028.1;locus_tag=PHA55_RS14485;product=flagella biosynthesis regulatory protein FliT;protein_id=WP_001015028.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2957807	2959294	.	+	.	ID=gene-PHA55_RS14490;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=protein_coding;locus_tag=PHA55_RS14490;old_locus_tag=PHA55_14485
NZ_CP116044.1	Protein Homology	CDS	2957807	2959294	.	+	0	ID=cds-WP_001245684.1;Parent=gene-PHA55_RS14490;Dbxref=Genbank:WP_001245684.1;Name=WP_001245684.1;Ontology_term=GO:0005975,GO:0004553,GO:0005509;gbkey=CDS;gene=amyA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,calcium ion binding|0005509||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416437.1;locus_tag=PHA55_RS14490;product=alpha-amylase;protein_id=WP_001245684.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2959328	2959741	.	-	.	ID=gene-PHA55_RS14495;Name=yedD;gbkey=Gene;gene=yedD;gene_biotype=protein_coding;locus_tag=PHA55_RS14495;old_locus_tag=PHA55_14490
NZ_CP116044.1	Protein Homology	CDS	2959328	2959741	.	-	0	ID=cds-WP_001439103.1;Parent=gene-PHA55_RS14495;Dbxref=Genbank:WP_001439103.1;Name=WP_001439103.1;gbkey=CDS;gene=yedD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310694.3;locus_tag=PHA55_RS14495;product=lipoprotein;protein_id=WP_001439103.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2959928	2961133	.	+	.	ID=gene-PHA55_RS14500;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=PHA55_RS14500;old_locus_tag=PHA55_14495
NZ_CP116044.1	Protein Homology	CDS	2959928	2961133	.	+	0	ID=cds-WP_000118901.1;Parent=gene-PHA55_RS14500;Dbxref=Genbank:WP_000118901.1;Name=WP_000118901.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416439.1;locus_tag=PHA55_RS14500;product=selenium metabolism membrane protein YedE/FdhT;protein_id=WP_000118901.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2961130	2961363	.	+	.	ID=gene-PHA55_RS14505;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=PHA55_RS14505;old_locus_tag=PHA55_14500
NZ_CP116044.1	Protein Homology	CDS	2961130	2961363	.	+	0	ID=cds-WP_000790498.1;Parent=gene-PHA55_RS14505;Dbxref=Genbank:WP_000790498.1;Name=WP_000790498.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310696.1;locus_tag=PHA55_RS14505;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_000790498.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2961470	2962141	.	+	.	ID=gene-PHA55_RS14510;Name=yedK;gbkey=Gene;gene=yedK;gene_biotype=protein_coding;locus_tag=PHA55_RS14510;old_locus_tag=PHA55_14505
NZ_CP116044.1	Protein Homology	CDS	2961470	2962141	.	+	0	ID=cds-WP_000334568.1;Parent=gene-PHA55_RS14510;Dbxref=Genbank:WP_000334568.1;Name=WP_000334568.1;gbkey=CDS;gene=yedK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245363.1;locus_tag=PHA55_RS14510;product=SOS response-associated peptidase;protein_id=WP_000334568.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2962181	2963389	.	-	.	ID=gene-PHA55_RS14515;Name=PHA55_RS14515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS14515;old_locus_tag=PHA55_14510
NZ_CP116044.1	Protein Homology	CDS	2962181	2963389	.	-	0	ID=cds-WP_061892850.1;Parent=gene-PHA55_RS14515;Dbxref=Genbank:WP_061892850.1;Name=WP_061892850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415949.3;locus_tag=PHA55_RS14515;product=RNA-guided endonuclease TnpB family protein;protein_id=WP_061892850.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	2963397	2963822	.	+	.	ID=gene-PHA55_RS14520;Name=tnpA;end_range=2963822,.;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=PHA55_RS14520;old_locus_tag=PHA55_14515;partial=true;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	2963397	2963822	.	+	0	ID=cds-PHA55_RS14520;Parent=gene-PHA55_RS14520;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=2963822,.;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313209.1;locus_tag=PHA55_RS14520;partial=true;product=IS200/IS605 family transposase;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	2964801	2965598	.	-	.	ID=gene-PHA55_RS14525;Name=ybcM;gbkey=Gene;gene=ybcM;gene_biotype=protein_coding;locus_tag=PHA55_RS14525;old_locus_tag=PHA55_14520
NZ_CP116044.1	Protein Homology	CDS	2964801	2965598	.	-	0	ID=cds-WP_000879833.1;Parent=gene-PHA55_RS14525;Dbxref=Genbank:WP_000879833.1;Name=WP_000879833.1;gbkey=CDS;gene=ybcM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415078.1;locus_tag=PHA55_RS14525;product=helix-turn-helix transcriptional regulator;protein_id=WP_000879833.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2965608	2966159	.	-	.	ID=gene-PHA55_RS14530;Name=ybcL;gbkey=Gene;gene=ybcL;gene_biotype=protein_coding;locus_tag=PHA55_RS14530;old_locus_tag=PHA55_14525
NZ_CP116044.1	Protein Homology	CDS	2965608	2966159	.	-	0	ID=cds-WP_000734031.1;Parent=gene-PHA55_RS14530;Dbxref=Genbank:WP_000734031.1;Name=WP_000734031.1;gbkey=CDS;gene=ybcL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707821.1;locus_tag=PHA55_RS14530;product=Raf kinase inhibitor-like protein YbcL;protein_id=WP_000734031.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2966328	2966660	.	-	.	ID=gene-PHA55_RS14535;Name=emrE;gbkey=Gene;gene=emrE;gene_biotype=protein_coding;locus_tag=PHA55_RS14535;old_locus_tag=PHA55_14530
NZ_CP116044.1	Protein Homology	CDS	2966328	2966660	.	-	0	ID=cds-WP_001070440.1;Parent=gene-PHA55_RS14535;Dbxref=Genbank:WP_001070440.1;Name=WP_001070440.1;gbkey=CDS;gene=emrE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707822.1;locus_tag=PHA55_RS14535;product=SMR family multidrug efflux protein EmrE;protein_id=WP_001070440.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2966994	2967308	.	-	.	ID=gene-PHA55_RS14540;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=PHA55_RS14540;old_locus_tag=PHA55_14535
NZ_CP116044.1	Protein Homology	CDS	2966994	2967308	.	-	0	ID=cds-WP_001274299.1;Parent=gene-PHA55_RS14540;Dbxref=Genbank:WP_001274299.1;Name=WP_001274299.1;Ontology_term=GO:0001539,GO:0005198;gbkey=CDS;gene=fliE;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310703.1;locus_tag=PHA55_RS14540;product=flagellar hook-basal body complex protein FliE;protein_id=WP_001274299.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2967523	2969181	.	+	.	ID=gene-PHA55_RS14545;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=PHA55_RS14545;old_locus_tag=PHA55_14540
NZ_CP116044.1	Protein Homology	CDS	2967523	2969181	.	+	0	ID=cds-WP_000994452.1;Parent=gene-PHA55_RS14545;Dbxref=Genbank:WP_000994452.1;Name=WP_000994452.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310704.1;locus_tag=PHA55_RS14545;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_000994452.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2969174	2970169	.	+	.	ID=gene-PHA55_RS14550;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=PHA55_RS14550;old_locus_tag=PHA55_14545
NZ_CP116044.1	Protein Homology	CDS	2969174	2970169	.	+	0	ID=cds-WP_000067950.1;Parent=gene-PHA55_RS14550;Dbxref=Genbank:WP_000067950.1;Name=WP_000067950.1;Ontology_term=GO:0001539,GO:0006935,GO:0005198,GO:0009433;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum basal body%2C C ring|0009433||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310705.1;locus_tag=PHA55_RS14550;product=flagellar motor switch protein FliG;protein_id=WP_000067950.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2970162	2970848	.	+	.	ID=gene-PHA55_RS14555;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=PHA55_RS14555;old_locus_tag=PHA55_14550
NZ_CP116044.1	Protein Homology	CDS	2970162	2970848	.	+	0	ID=cds-WP_001282699.1;Parent=gene-PHA55_RS14555;Dbxref=Genbank:WP_001282699.1;Name=WP_001282699.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416450.2;locus_tag=PHA55_RS14555;product=flagellar assembly protein FliH;protein_id=WP_001282699.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2970848	2972221	.	+	.	ID=gene-PHA55_RS14560;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=PHA55_RS14560;old_locus_tag=PHA55_14555
NZ_CP116044.1	Protein Homology	CDS	2970848	2972221	.	+	0	ID=cds-WP_000213294.1;Parent=gene-PHA55_RS14560;Dbxref=Genbank:WP_000213294.1;Name=WP_000213294.1;Ontology_term=GO:0001539,GO:0016887,GO:0009288;gbkey=CDS;gene=fliI;go_component=bacterial-type flagellum|0009288||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416451.1;locus_tag=PHA55_RS14560;product=flagellar protein export ATPase FliI;protein_id=WP_000213294.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2972240	2972683	.	+	.	ID=gene-PHA55_RS14565;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=PHA55_RS14565;old_locus_tag=PHA55_14560
NZ_CP116044.1	Protein Homology	CDS	2972240	2972683	.	+	0	ID=cds-WP_000807580.1;Parent=gene-PHA55_RS14565;Dbxref=Genbank:WP_000807580.1;Name=WP_000807580.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310708.1;locus_tag=PHA55_RS14565;product=flagellar export protein FliJ;protein_id=WP_000807580.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2972680	2973807	.	+	.	ID=gene-PHA55_RS14570;Name=fliK;gbkey=Gene;gene=fliK;gene_biotype=protein_coding;locus_tag=PHA55_RS14570;old_locus_tag=PHA55_14565
NZ_CP116044.1	Protein Homology	CDS	2972680	2973807	.	+	0	ID=cds-WP_000620105.1;Parent=gene-PHA55_RS14570;Dbxref=Genbank:WP_000620105.1;Name=WP_000620105.1;gbkey=CDS;gene=fliK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707828.1;locus_tag=PHA55_RS14570;product=flagellar hook-length control protein FliK;protein_id=WP_000620105.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2973912	2974376	.	+	.	ID=gene-PHA55_RS14575;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=PHA55_RS14575;old_locus_tag=PHA55_14570
NZ_CP116044.1	Protein Homology	CDS	2973912	2974376	.	+	0	ID=cds-WP_000133124.1;Parent=gene-PHA55_RS14575;Dbxref=Genbank:WP_000133124.1;Name=WP_000133124.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310710.1;locus_tag=PHA55_RS14575;product=flagellar basal body-associated protein FliL;protein_id=WP_000133124.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2974381	2975385	.	+	.	ID=gene-PHA55_RS14580;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=PHA55_RS14580;old_locus_tag=PHA55_14575
NZ_CP116044.1	Protein Homology	CDS	2974381	2975385	.	+	0	ID=cds-WP_001295641.1;Parent=gene-PHA55_RS14580;Dbxref=Genbank:WP_001295641.1;Name=WP_001295641.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127760.1;locus_tag=PHA55_RS14580;product=flagellar motor switch protein FliM;protein_id=WP_001295641.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2975382	2975795	.	+	.	ID=gene-PHA55_RS14585;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=PHA55_RS14585;old_locus_tag=PHA55_14580
NZ_CP116044.1	Protein Homology	CDS	2975382	2975795	.	+	0	ID=cds-WP_001282098.1;Parent=gene-PHA55_RS14585;Dbxref=Genbank:WP_001282098.1;Name=WP_001282098.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310712.1;locus_tag=PHA55_RS14585;product=flagellar motor switch protein FliN;protein_id=WP_001282098.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2975798	2976163	.	+	.	ID=gene-PHA55_RS14590;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=PHA55_RS14590;old_locus_tag=PHA55_14585
NZ_CP116044.1	Protein Homology	CDS	2975798	2976163	.	+	0	ID=cds-WP_001349974.1;Parent=gene-PHA55_RS14590;Dbxref=Genbank:WP_001349974.1;Name=WP_001349974.1;Ontology_term=GO:0044781;gbkey=CDS;gene=fliO;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310713.2;locus_tag=PHA55_RS14590;product=flagellar biosynthetic protein FliO;protein_id=WP_001349974.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2976163	2976900	.	+	.	ID=gene-PHA55_RS14595;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=PHA55_RS14595;old_locus_tag=PHA55_14590
NZ_CP116044.1	Protein Homology	CDS	2976163	2976900	.	+	0	ID=cds-WP_001253450.1;Parent=gene-PHA55_RS14595;Dbxref=Genbank:WP_001253450.1;Name=WP_001253450.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0001539;gbkey=CDS;gene=fliP;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310714.1;locus_tag=PHA55_RS14595;product=flagellar type III secretion system pore protein FliP;protein_id=WP_001253450.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2976910	2977179	.	+	.	ID=gene-PHA55_RS14600;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=PHA55_RS14600;old_locus_tag=PHA55_14595
NZ_CP116044.1	Protein Homology	CDS	2976910	2977179	.	+	0	ID=cds-WP_000187358.1;Parent=gene-PHA55_RS14600;Dbxref=Genbank:WP_000187358.1;Name=WP_000187358.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliQ;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365797.1;locus_tag=PHA55_RS14600;product=flagellar biosynthesis protein FliQ;protein_id=WP_000187358.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2977188	2977973	.	+	.	ID=gene-PHA55_RS14605;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=PHA55_RS14605;old_locus_tag=PHA55_14600
NZ_CP116044.1	Protein Homology	CDS	2977188	2977973	.	+	0	ID=cds-WP_000983976.1;Parent=gene-PHA55_RS14605;Dbxref=Genbank:WP_000983976.1;Name=WP_000983976.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310716.1;locus_tag=PHA55_RS14605;product=flagellar biosynthetic protein FliR;protein_id=WP_000983976.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2978263	2978886	.	+	.	ID=gene-PHA55_RS14610;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=PHA55_RS14610;old_locus_tag=PHA55_14605
NZ_CP116044.1	Protein Homology	CDS	2978263	2978886	.	+	0	ID=cds-WP_000103987.1;Parent=gene-PHA55_RS14610;Dbxref=Genbank:WP_000103987.1;Name=WP_000103987.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rcsA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707836.1;locus_tag=PHA55_RS14610;product=transcriptional regulator RcsA;protein_id=WP_000103987.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2978930	2979118	.	-	.	ID=gene-PHA55_RS14615;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=PHA55_RS14615;old_locus_tag=PHA55_14610
NZ_CP116044.1	Protein Homology	CDS	2978930	2979118	.	-	0	ID=cds-WP_000867217.1;Parent=gene-PHA55_RS14615;Dbxref=Genbank:WP_000867217.1;Name=WP_000867217.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310718.1;locus_tag=PHA55_RS14615;product=protein DsrB;protein_id=WP_000867217.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2979281	2979508	.	+	.	ID=gene-PHA55_RS14620;Name=yodD;gbkey=Gene;gene=yodD;gene_biotype=protein_coding;locus_tag=PHA55_RS14620;old_locus_tag=PHA55_14615
NZ_CP116044.1	Protein Homology	CDS	2979281	2979508	.	+	0	ID=cds-WP_000844800.1;Parent=gene-PHA55_RS14620;Dbxref=Genbank:WP_000844800.1;Name=WP_000844800.1;gbkey=CDS;gene=yodD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416463.4;locus_tag=PHA55_RS14620;product=peroxide/acid resistance protein YodD;protein_id=WP_000844800.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2979806	2980621	.	+	.	ID=gene-PHA55_RS14625;Name=yedP;gbkey=Gene;gene=yedP;gene_biotype=protein_coding;locus_tag=PHA55_RS14625;old_locus_tag=PHA55_14620
NZ_CP116044.1	Protein Homology	CDS	2979806	2980621	.	+	0	ID=cds-WP_000491500.1;Parent=gene-PHA55_RS14625;Dbxref=Genbank:WP_000491500.1;Name=WP_000491500.1;Ontology_term=GO:0051479,GO:0050531;gbkey=CDS;gene=yedP;go_function=mannosyl-3-phosphoglycerate phosphatase activity|0050531||IEA;go_process=mannosylglycerate biosynthetic process|0051479||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310720.1;locus_tag=PHA55_RS14625;product=mannosyl-3-phosphoglycerate phosphatase-related protein;protein_id=WP_000491500.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2980618	2982312	.	-	.	ID=gene-PHA55_RS14630;Name=dgcQ;gbkey=Gene;gene=dgcQ;gene_biotype=protein_coding;locus_tag=PHA55_RS14630;old_locus_tag=PHA55_14625
NZ_CP116044.1	Protein Homology	CDS	2980618	2982312	.	-	0	ID=cds-WP_001542934.1;Parent=gene-PHA55_RS14630;Dbxref=Genbank:WP_001542934.1;Name=WP_001542934.1;gbkey=CDS;gene=dgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416465.2;locus_tag=PHA55_RS14630;product=cellulose biosynthesis regulator diguanylate cyclase DgcQ;protein_id=WP_001542934.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2982550	2982732	.	-	.	ID=gene-PHA55_RS14635;Name=yodC;gbkey=Gene;gene=yodC;gene_biotype=protein_coding;locus_tag=PHA55_RS14635;old_locus_tag=PHA55_14630
NZ_CP116044.1	Protein Homology	CDS	2982550	2982732	.	-	0	ID=cds-WP_000009306.1;Parent=gene-PHA55_RS14635;Dbxref=Genbank:WP_000009306.1;Name=WP_000009306.1;gbkey=CDS;gene=yodC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310722.1;locus_tag=PHA55_RS14635;product=DUF2158 domain-containing protein;protein_id=WP_000009306.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2982811	2983728	.	-	.	ID=gene-PHA55_RS14640;Name=yedI;gbkey=Gene;gene=yedI;gene_biotype=protein_coding;locus_tag=PHA55_RS14640;old_locus_tag=PHA55_14635
NZ_CP116044.1	Protein Homology	CDS	2982811	2983728	.	-	0	ID=cds-WP_000922683.1;Parent=gene-PHA55_RS14640;Dbxref=Genbank:WP_000922683.1;Name=WP_000922683.1;gbkey=CDS;gene=yedI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310723.1;locus_tag=PHA55_RS14640;product=DUF808 domain-containing protein;protein_id=WP_000922683.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2983901	2984821	.	+	.	ID=gene-PHA55_RS14645;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;locus_tag=PHA55_RS14645;old_locus_tag=PHA55_14640
NZ_CP116044.1	Protein Homology	CDS	2983901	2984821	.	+	0	ID=cds-WP_023568747.1;Parent=gene-PHA55_RS14645;Dbxref=Genbank:WP_023568747.1;Name=WP_023568747.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310724.1;locus_tag=PHA55_RS14645;product=drug/metabolite exporter YedA;protein_id=WP_023568747.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2984810	2985280	.	-	.	ID=gene-PHA55_RS14650;Name=vsr;gbkey=Gene;gene=vsr;gene_biotype=protein_coding;locus_tag=PHA55_RS14650;old_locus_tag=PHA55_14645
NZ_CP116044.1	Protein Homology	CDS	2984810	2985280	.	-	0	ID=cds-WP_000786005.1;Parent=gene-PHA55_RS14650;Dbxref=Genbank:WP_000786005.1;Name=WP_000786005.1;gbkey=CDS;gene=vsr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416469.1;locus_tag=PHA55_RS14650;product=VSPR family DNA mismatch endonuclease;protein_id=WP_000786005.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2985261	2986679	.	-	.	ID=gene-PHA55_RS14655;Name=dcm;gbkey=Gene;gene=dcm;gene_biotype=protein_coding;locus_tag=PHA55_RS14655;old_locus_tag=PHA55_14650
NZ_CP116044.1	Protein Homology	CDS	2985261	2986679	.	-	0	ID=cds-WP_001157218.1;Parent=gene-PHA55_RS14655;Dbxref=Genbank:WP_001157218.1;Name=WP_001157218.1;gbkey=CDS;gene=dcm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310726.1;locus_tag=PHA55_RS14655;product=DNA-cytosine methyltransferase;protein_id=WP_001157218.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2986746	2987441	.	-	.	ID=gene-PHA55_RS14660;Name=yedJ;gbkey=Gene;gene=yedJ;gene_biotype=protein_coding;locus_tag=PHA55_RS14660;old_locus_tag=PHA55_14655
NZ_CP116044.1	Protein Homology	CDS	2986746	2987441	.	-	0	ID=cds-WP_000365574.1;Parent=gene-PHA55_RS14660;Dbxref=Genbank:WP_000365574.1;Name=WP_000365574.1;gbkey=CDS;gene=yedJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416471.1;locus_tag=PHA55_RS14660;product=phosphohydrolase;protein_id=WP_000365574.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2987481	2987762	.	-	.	ID=gene-PHA55_RS14665;Name=drpB;gbkey=Gene;gene=drpB;gene_biotype=protein_coding;locus_tag=PHA55_RS14665;old_locus_tag=PHA55_14660
NZ_CP116044.1	Protein Homology	CDS	2987481	2987762	.	-	0	ID=cds-WP_001297704.1;Parent=gene-PHA55_RS14665;Dbxref=Genbank:WP_001297704.1;Name=WP_001297704.1;gbkey=CDS;gene=drpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295638.1;locus_tag=PHA55_RS14665;product=cell division protein DrpB;protein_id=WP_001297704.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2988413	2989528	.	+	.	ID=gene-PHA55_RS14670;Name=PHA55_RS14670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS14670;old_locus_tag=PHA55_14665
NZ_CP116044.1	Protein Homology	CDS	2988413	2989528	.	+	0	ID=cds-WP_000824355.1;Parent=gene-PHA55_RS14670;Dbxref=Genbank:WP_000824355.1;Name=WP_000824355.1;Ontology_term=GO:0034220,GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000824359.1;locus_tag=PHA55_RS14670;product=porin;protein_id=WP_000824355.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2990120	2990971	.	+	.	ID=gene-PHA55_RS14675;Name=hchA;gbkey=Gene;gene=hchA;gene_biotype=protein_coding;locus_tag=PHA55_RS14675;old_locus_tag=PHA55_14670
NZ_CP116044.1	Protein Homology	CDS	2990120	2990971	.	+	0	ID=cds-WP_000218208.1;Parent=gene-PHA55_RS14675;Dbxref=Genbank:WP_000218208.1;Name=WP_000218208.1;Ontology_term=GO:0036524;gbkey=CDS;gene=hchA;go_function=protein deglycase activity|0036524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416476.1;locus_tag=PHA55_RS14675;product=protein deglycase HchA;protein_id=WP_000218208.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2991079	2992437	.	-	.	ID=gene-PHA55_RS14680;Name=hprS;gbkey=Gene;gene=hprS;gene_biotype=protein_coding;locus_tag=PHA55_RS14680;old_locus_tag=PHA55_14675
NZ_CP116044.1	Protein Homology	CDS	2991079	2992437	.	-	0	ID=cds-WP_271287442.1;Parent=gene-PHA55_RS14680;Dbxref=Genbank:WP_271287442.1;Name=WP_271287442.1;gbkey=CDS;gene=hprS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416477.1;locus_tag=PHA55_RS14680;product=two-component system sensor histidine kinase HprS;protein_id=WP_271287442.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2992437	2993108	.	-	.	ID=gene-PHA55_RS14685;Name=hprR;gbkey=Gene;gene=hprR;gene_biotype=protein_coding;locus_tag=PHA55_RS14685;old_locus_tag=PHA55_14680
NZ_CP116044.1	Protein Homology	CDS	2992437	2993108	.	-	0	ID=cds-WP_001339045.1;Parent=gene-PHA55_RS14685;Dbxref=Genbank:WP_001339045.1;Name=WP_001339045.1;gbkey=CDS;gene=hprR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707854.2;locus_tag=PHA55_RS14685;product=response regulator transcription factor HprR;protein_id=WP_001339045.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2993241	2993654	.	+	.	ID=gene-PHA55_RS14690;Name=hiuH;gbkey=Gene;gene=hiuH;gene_biotype=protein_coding;locus_tag=PHA55_RS14690;old_locus_tag=PHA55_14685
NZ_CP116044.1	Protein Homology	CDS	2993241	2993654	.	+	0	ID=cds-WP_000920128.1;Parent=gene-PHA55_RS14690;Dbxref=Genbank:WP_000920128.1;Name=WP_000920128.1;gbkey=CDS;gene=hiuH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707855.1;locus_tag=PHA55_RS14690;product=hydroxyisourate hydrolase;protein_id=WP_000920128.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2993763	2994767	.	+	.	ID=gene-PHA55_RS14695;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=PHA55_RS14695;old_locus_tag=PHA55_14690
NZ_CP116044.1	Protein Homology	CDS	2993763	2994767	.	+	0	ID=cds-WP_000740100.1;Parent=gene-PHA55_RS14695;Dbxref=Genbank:WP_000740100.1;Name=WP_000740100.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310736.1;locus_tag=PHA55_RS14695;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_000740100.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2994768	2995403	.	+	.	ID=gene-PHA55_RS14700;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=PHA55_RS14700;old_locus_tag=PHA55_14695
NZ_CP116044.1	Protein Homology	CDS	2994768	2995403	.	+	0	ID=cds-WP_001240105.1;Parent=gene-PHA55_RS14700;Dbxref=Genbank:WP_001240105.1;Name=WP_001240105.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416481.1;locus_tag=PHA55_RS14700;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_001240105.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2995660	2996310	.	+	.	ID=gene-PHA55_RS14705;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=protein_coding;locus_tag=PHA55_RS14705;old_locus_tag=PHA55_14700
NZ_CP116044.1	Protein Homology	CDS	2995660	2996310	.	+	0	ID=cds-WP_001007749.1;Parent=gene-PHA55_RS14705;Dbxref=Genbank:WP_001007749.1;Name=WP_001007749.1;Ontology_term=GO:0008270;gbkey=CDS;gene=zinT;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416482.1;locus_tag=PHA55_RS14705;product=metal-binding protein ZinT;protein_id=WP_001007749.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2996653	2997183	.	+	.	ID=gene-PHA55_RS14710;Name=yodB;gbkey=Gene;gene=yodB;gene_biotype=protein_coding;locus_tag=PHA55_RS14710;old_locus_tag=PHA55_14705
NZ_CP116044.1	Protein Homology	CDS	2996653	2997183	.	+	0	ID=cds-WP_001079074.1;Parent=gene-PHA55_RS14710;Dbxref=Genbank:WP_001079074.1;Name=WP_001079074.1;gbkey=CDS;gene=yodB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416483.4;locus_tag=PHA55_RS14710;product=cytochrome b;protein_id=WP_001079074.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2997931	2999151	.	+	.	ID=gene-PHA55_RS14715;Name=PHA55_RS14715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS14715;old_locus_tag=PHA55_14710
NZ_CP116044.1	Protein Homology	CDS	2997931	2999151	.	+	0	ID=cds-WP_001124531.1;Parent=gene-PHA55_RS14715;Dbxref=Genbank:WP_001124531.1;Name=WP_001124531.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001607533.1;locus_tag=PHA55_RS14715;product=site-specific integrase;protein_id=WP_001124531.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	2999265	3001085	.	+	.	ID=gene-PHA55_RS14720;Name=PHA55_RS14720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS14720;old_locus_tag=PHA55_14715
NZ_CP116044.1	Protein Homology	CDS	2999265	3001085	.	+	0	ID=cds-WP_000995609.1;Parent=gene-PHA55_RS14720;Dbxref=Genbank:WP_000995609.1;Name=WP_000995609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000995609.1;locus_tag=PHA55_RS14720;product=hypothetical protein;protein_id=WP_000995609.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3001200	3002663	.	-	.	ID=gene-PHA55_RS14725;Name=pilV;gbkey=Gene;gene=pilV;gene_biotype=protein_coding;locus_tag=PHA55_RS14725;old_locus_tag=PHA55_14720
NZ_CP116044.1	Protein Homology	CDS	3001200	3002663	.	-	0	ID=cds-WP_000592083.1;Parent=gene-PHA55_RS14725;Dbxref=Genbank:WP_000592083.1;Name=WP_000592083.1;gbkey=CDS;gene=pilV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000592083.1;locus_tag=PHA55_RS14725;product=shufflon system plasmid conjugative transfer pilus tip adhesin PilV;protein_id=WP_000592083.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3002716	3003273	.	-	.	ID=gene-PHA55_RS14730;Name=PHA55_RS14730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS14730;old_locus_tag=PHA55_14725
NZ_CP116044.1	Protein Homology	CDS	3002716	3003273	.	-	0	ID=cds-WP_000243498.1;Parent=gene-PHA55_RS14730;Dbxref=Genbank:WP_000243498.1;Name=WP_000243498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000243510.1;locus_tag=PHA55_RS14730;product=type 4 pilus major pilin;protein_id=WP_000243498.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3003671	3003976	.	-	.	ID=gene-PHA55_RS14735;Name=PHA55_RS14735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS14735;old_locus_tag=PHA55_14730
NZ_CP116044.1	Protein Homology	CDS	3003671	3003976	.	-	0	ID=cds-WP_000368349.1;Parent=gene-PHA55_RS14735;Dbxref=Genbank:WP_000368349.1;Name=WP_000368349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000368354.1;locus_tag=PHA55_RS14735;product=conjugal transfer protein TraD;protein_id=WP_000368349.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3004620	3006089	.	+	.	ID=gene-PHA55_RS14740;Name=PHA55_RS14740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS14740;old_locus_tag=PHA55_14735
NZ_CP116044.1	Protein Homology	CDS	3004620	3006089	.	+	0	ID=cds-WP_000964090.1;Parent=gene-PHA55_RS14740;Dbxref=Genbank:WP_000964090.1;Name=WP_000964090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000964091.1;locus_tag=PHA55_RS14740;product=MobA/MobL family protein;protein_id=WP_000964090.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3006198	3007718	.	+	.	ID=gene-PHA55_RS14745;Name=PHA55_RS14745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS14745;old_locus_tag=PHA55_14740
NZ_CP116044.1	Protein Homology	CDS	3006198	3007718	.	+	0	ID=cds-WP_271287443.1;Parent=gene-PHA55_RS14745;Dbxref=Genbank:WP_271287443.1;Name=WP_271287443.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622561.1;locus_tag=PHA55_RS14745;product=AAA family ATPase;protein_id=WP_271287443.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3007731	3008663	.	+	.	ID=gene-PHA55_RS14750;Name=PHA55_RS14750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS14750;old_locus_tag=PHA55_14745
NZ_CP116044.1	Protein Homology	CDS	3007731	3008663	.	+	0	ID=cds-WP_000587166.1;Parent=gene-PHA55_RS14750;Dbxref=Genbank:WP_000587166.1;Name=WP_000587166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000587166.1;locus_tag=PHA55_RS14750;product=hypothetical protein;protein_id=WP_000587166.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3008763	3009293	.	-	.	ID=gene-PHA55_RS14755;Name=PHA55_RS14755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS14755;old_locus_tag=PHA55_14750
NZ_CP116044.1	Protein Homology	CDS	3008763	3009293	.	-	0	ID=cds-WP_000722540.1;Parent=gene-PHA55_RS14755;Dbxref=Genbank:WP_000722540.1;Name=WP_000722540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001608353.1;locus_tag=PHA55_RS14755;product=lipoprotein;protein_id=WP_000722540.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3009726	3010199	.	+	.	ID=gene-PHA55_RS14760;Name=PHA55_RS14760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS14760;old_locus_tag=PHA55_14755
NZ_CP116044.1	Protein Homology	CDS	3009726	3010199	.	+	0	ID=cds-WP_000388419.1;Parent=gene-PHA55_RS14760;Dbxref=Genbank:WP_000388419.1;Name=WP_000388419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001351134.1;locus_tag=PHA55_RS14760;product=DUF4755 domain-containing protein;protein_id=WP_000388419.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3010231	3010608	.	+	.	ID=gene-PHA55_RS14765;Name=PHA55_RS14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS14765;old_locus_tag=PHA55_14760
NZ_CP116044.1	Protein Homology	CDS	3010231	3010608	.	+	0	ID=cds-WP_000734573.1;Parent=gene-PHA55_RS14765;Dbxref=Genbank:WP_000734573.1;Name=WP_000734573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000734570.1;locus_tag=PHA55_RS14765;product=hypothetical protein;protein_id=WP_000734573.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3010693	3011715	.	-	.	ID=gene-PHA55_RS14770;Name=PHA55_RS14770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS14770;old_locus_tag=PHA55_14765
NZ_CP116044.1	Protein Homology	CDS	3010693	3011715	.	-	0	ID=cds-WP_000918419.1;Parent=gene-PHA55_RS14770;Dbxref=Genbank:WP_000918419.1;Name=WP_000918419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000918420.1;locus_tag=PHA55_RS14770;product=DUF4238 domain-containing protein;protein_id=WP_000918419.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3011942	3012346	.	-	.	ID=gene-PHA55_RS14775;Name=PHA55_RS14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS14775;old_locus_tag=PHA55_14770
NZ_CP116044.1	Protein Homology	CDS	3011942	3012346	.	-	0	ID=cds-WP_000912913.1;Parent=gene-PHA55_RS14775;Dbxref=Genbank:WP_000912913.1;Name=WP_000912913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001226458.1;locus_tag=PHA55_RS14775;product=hypothetical protein;protein_id=WP_000912913.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3012431	3012700	.	-	.	ID=gene-PHA55_RS14780;Name=PHA55_RS14780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS14780;old_locus_tag=PHA55_14775
NZ_CP116044.1	Protein Homology	CDS	3012431	3012700	.	-	0	ID=cds-WP_001059616.1;Parent=gene-PHA55_RS14780;Dbxref=Genbank:WP_001059616.1;Name=WP_001059616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001059618.1;locus_tag=PHA55_RS14780;product=hypothetical protein;protein_id=WP_001059616.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3013523	3014188	.	-	.	ID=gene-PHA55_RS14785;Name=PHA55_RS14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS14785;old_locus_tag=PHA55_14780
NZ_CP116044.1	Protein Homology	CDS	3013523	3014188	.	-	0	ID=cds-WP_000483531.1;Parent=gene-PHA55_RS14785;Dbxref=Genbank:WP_000483531.1;Name=WP_000483531.1;Ontology_term=GO:0003676,GO:0004519;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000483520.1;locus_tag=PHA55_RS14785;product=HNH endonuclease;protein_id=WP_000483531.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3014192	3015442	.	-	.	ID=gene-PHA55_RS14790;Name=PHA55_RS14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS14790;old_locus_tag=PHA55_14785
NZ_CP116044.1	Protein Homology	CDS	3014192	3015442	.	-	0	ID=cds-WP_000932961.1;Parent=gene-PHA55_RS14790;Dbxref=Genbank:WP_000932961.1;Name=WP_000932961.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932962.1;locus_tag=PHA55_RS14790;product=AAA family ATPase;protein_id=WP_000932961.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	3016723	3017097	.	+	.	ID=gene-PHA55_RS14795;Name=PHA55_RS14795;end_range=3017097,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS14795;old_locus_tag=PHA55_14790;partial=true;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	3016723	3017097	.	+	0	ID=cds-PHA55_RS14795;Parent=gene-PHA55_RS14795;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3017097,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004860215.1;locus_tag=PHA55_RS14795;partial=true;product=DNA-binding protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	3017127	3018289	.	-	.	ID=gene-PHA55_RS14800;Name=PHA55_RS14800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS14800;old_locus_tag=PHA55_14795
NZ_CP116044.1	Protein Homology	CDS	3018028	3018289	.	-	0	ID=cds-WP_085947771.1-2;Parent=gene-PHA55_RS14800;Dbxref=Genbank:WP_085947771.1;Name=WP_085947771.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=PHA55_RS14800;product=IS3-like element IS3 family transposase;protein_id=WP_085947771.1;transl_table=11
NZ_CP116044.1	Protein Homology	CDS	3017127	3018028	.	-	2	ID=cds-WP_085947771.1-2;Parent=gene-PHA55_RS14800;Dbxref=Genbank:WP_085947771.1;Name=WP_085947771.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=PHA55_RS14800;product=IS3-like element IS3 family transposase;protein_id=WP_085947771.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	3018350	3018718	.	+	.	ID=gene-PHA55_RS14805;Name=PHA55_RS14805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS14805;old_locus_tag=PHA55_14800;partial=true;pseudo=true;start_range=.,3018350
NZ_CP116044.1	Protein Homology	CDS	3018350	3018718	.	+	0	ID=cds-PHA55_RS14805;Parent=gene-PHA55_RS14805;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004860215.1;locus_tag=PHA55_RS14805;partial=true;product=DNA-binding protein;pseudo=true;start_range=.,3018350;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	3018743	3019483	.	+	.	ID=gene-PHA55_RS14810;Name=PHA55_RS14810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS14810;old_locus_tag=PHA55_14805;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	3018743	3019483	.	+	0	ID=cds-PHA55_RS14810;Parent=gene-PHA55_RS14810;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000735917.1;locus_tag=PHA55_RS14810;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	3019620	3020099	.	+	.	ID=gene-PHA55_RS14815;Name=PHA55_RS14815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS14815;old_locus_tag=PHA55_14810
NZ_CP116044.1	Protein Homology	CDS	3019620	3020099	.	+	0	ID=cds-WP_271287444.1;Parent=gene-PHA55_RS14815;Dbxref=Genbank:WP_271287444.1;Name=WP_271287444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001233373.1;locus_tag=PHA55_RS14815;product=DUF4756 family protein;protein_id=WP_271287444.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3020256	3020660	.	+	.	ID=gene-PHA55_RS14820;Name=PHA55_RS14820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS14820;old_locus_tag=PHA55_14815
NZ_CP116044.1	Protein Homology	CDS	3020256	3020660	.	+	0	ID=cds-WP_001287368.1;Parent=gene-PHA55_RS14820;Dbxref=Genbank:WP_001287368.1;Name=WP_001287368.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519859.1;locus_tag=PHA55_RS14820;product=H-NS family nucleoid-associated regulatory protein;protein_id=WP_001287368.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	3020724	3021074	.	-	.	ID=gene-PHA55_RS14825;Name=PHA55_RS14825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS14825;old_locus_tag=PHA55_14820;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	3020724	3021074	.	-	0	ID=cds-PHA55_RS14825;Parent=gene-PHA55_RS14825;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000505227.1;locus_tag=PHA55_RS14825;product=DUF6404 family protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	3021183	3021425	.	-	.	ID=gene-PHA55_RS14830;Name=PHA55_RS14830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS14830;old_locus_tag=PHA55_14825
NZ_CP116044.1	Protein Homology	CDS	3021183	3021425	.	-	0	ID=cds-WP_000564598.1;Parent=gene-PHA55_RS14830;Dbxref=Genbank:WP_000564598.1;Name=WP_000564598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000564592.1;locus_tag=PHA55_RS14830;product=DNA-binding protein;protein_id=WP_000564598.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3021499	3021795	.	-	.	ID=gene-PHA55_RS14835;Name=PHA55_RS14835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS14835;old_locus_tag=PHA55_14830
NZ_CP116044.1	Protein Homology	CDS	3021499	3021795	.	-	0	ID=cds-WP_001091327.1;Parent=gene-PHA55_RS14835;Dbxref=Genbank:WP_001091327.1;Name=WP_001091327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001091325.1;locus_tag=PHA55_RS14835;product=hypothetical protein;protein_id=WP_001091327.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3021848	3022138	.	-	.	ID=gene-PHA55_RS14840;Name=PHA55_RS14840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS14840;old_locus_tag=PHA55_14835
NZ_CP116044.1	Protein Homology	CDS	3021848	3022138	.	-	0	ID=cds-WP_000687690.1;Parent=gene-PHA55_RS14840;Dbxref=Genbank:WP_000687690.1;Name=WP_000687690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524933.1;locus_tag=PHA55_RS14840;product=hypothetical protein;protein_id=WP_000687690.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3022219	3022437	.	-	.	ID=gene-PHA55_RS14845;Name=PHA55_RS14845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS14845;old_locus_tag=PHA55_14840
NZ_CP116044.1	Protein Homology	CDS	3022219	3022437	.	-	0	ID=cds-WP_001447392.1;Parent=gene-PHA55_RS14845;Dbxref=Genbank:WP_001447392.1;Name=WP_001447392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519863.1;locus_tag=PHA55_RS14845;product=AlpA family transcriptional regulator;protein_id=WP_001447392.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3022613	3023449	.	-	.	ID=gene-PHA55_RS14850;Name=PHA55_RS14850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS14850;old_locus_tag=PHA55_14845
NZ_CP116044.1	Protein Homology	CDS	3022613	3023449	.	-	0	ID=cds-WP_000830398.1;Parent=gene-PHA55_RS14850;Dbxref=Genbank:WP_000830398.1;Name=WP_000830398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000830395.1;locus_tag=PHA55_RS14850;product=DUF6387 family protein;protein_id=WP_000830398.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3023729	3023818	.	-	.	ID=gene-PHA55_RS14855;Name=PHA55_RS14855;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS14855;old_locus_tag=PHA55_14850
NZ_CP116044.1	tRNAscan-SE	tRNA	3023729	3023818	.	-	.	ID=rna-PHA55_RS14855;Parent=gene-PHA55_RS14855;anticodon=(pos:complement(3023782..3023784));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS14855;product=tRNA-Ser
NZ_CP116044.1	tRNAscan-SE	exon	3023729	3023818	.	-	.	ID=exon-PHA55_RS14855-1;Parent=rna-PHA55_RS14855;anticodon=(pos:complement(3023782..3023784));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS14855;product=tRNA-Ser
NZ_CP116044.1	RefSeq	gene	3023912	3024709	.	+	.	ID=gene-PHA55_RS14860;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=PHA55_RS14860;old_locus_tag=PHA55_14855
NZ_CP116044.1	Protein Homology	CDS	3023912	3024709	.	+	0	ID=cds-WP_001442913.1;Parent=gene-PHA55_RS14860;Dbxref=Genbank:WP_001442913.1;Name=WP_001442913.1;Ontology_term=GO:0008237;gbkey=CDS;gene=mtfA;go_function=metallopeptidase activity|0008237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310801.2;locus_tag=PHA55_RS14860;product=DgsA anti-repressor MtfA;protein_id=WP_001442913.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3024810	3024885	.	+	.	ID=gene-PHA55_RS14865;Name=PHA55_RS14865;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS14865;old_locus_tag=PHA55_14860
NZ_CP116044.1	tRNAscan-SE	tRNA	3024810	3024885	.	+	.	ID=rna-PHA55_RS14865;Parent=gene-PHA55_RS14865;anticodon=(pos:3024843..3024845);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS14865;product=tRNA-Asn
NZ_CP116044.1	tRNAscan-SE	exon	3024810	3024885	.	+	.	ID=exon-PHA55_RS14865-1;Parent=rna-PHA55_RS14865;anticodon=(pos:3024843..3024845);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS14865;product=tRNA-Asn
NZ_CP116044.1	RefSeq	pseudogene	3025199	3033180	.	+	.	ID=gene-PHA55_RS14870;Name=PHA55_RS14870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS14870;old_locus_tag=PHA55_14865;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	3025199	3033180	.	+	0	ID=cds-PHA55_RS14870;Parent=gene-PHA55_RS14870;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010904796.1;locus_tag=PHA55_RS14870;product=Ig-like domain-containing protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	3033442	3034494	.	-	.	ID=gene-PHA55_RS14875;Name=PHA55_RS14875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS14875;old_locus_tag=PHA55_14870
NZ_CP116044.1	Protein Homology	CDS	3033442	3034494	.	-	0	ID=cds-WP_000477878.1;Parent=gene-PHA55_RS14875;Dbxref=Genbank:WP_000477878.1;Name=WP_000477878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310804.1;locus_tag=PHA55_RS14875;product=glycosyltransferase family 9 protein;protein_id=WP_000477878.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3034809	3036125	.	+	.	ID=gene-PHA55_RS14880;Name=shiA;gbkey=Gene;gene=shiA;gene_biotype=protein_coding;locus_tag=PHA55_RS14880;old_locus_tag=PHA55_14875
NZ_CP116044.1	Protein Homology	CDS	3034809	3036125	.	+	0	ID=cds-WP_000378571.1;Parent=gene-PHA55_RS14880;Dbxref=Genbank:WP_000378571.1;Name=WP_000378571.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=shiA;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416488.1;locus_tag=PHA55_RS14880;product=shikimate transporter;protein_id=WP_000378571.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3036227	3037681	.	+	.	ID=gene-PHA55_RS14885;Name=amn;gbkey=Gene;gene=amn;gene_biotype=protein_coding;locus_tag=PHA55_RS14885;old_locus_tag=PHA55_14880
NZ_CP116044.1	Protein Homology	CDS	3036227	3037681	.	+	0	ID=cds-WP_001060244.1;Parent=gene-PHA55_RS14885;Dbxref=Genbank:WP_001060244.1;Name=WP_001060244.1;Ontology_term=GO:0046033,GO:0008714;gbkey=CDS;gene=amn;go_function=AMP nucleosidase activity|0008714||IEA;go_process=AMP metabolic process|0046033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310806.1;locus_tag=PHA55_RS14885;product=AMP nucleosidase;protein_id=WP_001060244.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3038024	3038740	.	+	.	ID=gene-PHA55_RS14890;Name=yeeN;gbkey=Gene;gene=yeeN;gene_biotype=protein_coding;locus_tag=PHA55_RS14890;old_locus_tag=PHA55_14885
NZ_CP116044.1	Protein Homology	CDS	3038024	3038740	.	+	0	ID=cds-WP_000532923.1;Parent=gene-PHA55_RS14890;Dbxref=Genbank:WP_000532923.1;Name=WP_000532923.1;gbkey=CDS;gene=yeeN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416490.1;locus_tag=PHA55_RS14890;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000532923.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3039192	3039267	.	-	.	ID=gene-PHA55_RS14895;Name=PHA55_RS14895;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS14895;old_locus_tag=PHA55_14890
NZ_CP116044.1	tRNAscan-SE	tRNA	3039192	3039267	.	-	.	ID=rna-PHA55_RS14895;Parent=gene-PHA55_RS14895;anticodon=(pos:complement(3039232..3039234));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS14895;product=tRNA-Asn
NZ_CP116044.1	tRNAscan-SE	exon	3039192	3039267	.	-	.	ID=exon-PHA55_RS14895-1;Parent=rna-PHA55_RS14895;anticodon=(pos:complement(3039232..3039234));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS14895;product=tRNA-Asn
NZ_CP116044.1	RefSeq	gene	3039368	3041011	.	-	.	ID=gene-PHA55_RS14900;Name=yeeO;gbkey=Gene;gene=yeeO;gene_biotype=protein_coding;locus_tag=PHA55_RS14900;old_locus_tag=PHA55_14895
NZ_CP116044.1	Protein Homology	CDS	3039368	3041011	.	-	0	ID=cds-WP_122985852.1;Parent=gene-PHA55_RS14900;Dbxref=Genbank:WP_122985852.1;Name=WP_122985852.1;gbkey=CDS;gene=yeeO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416491.3;locus_tag=PHA55_RS14900;product=toxic metabolite efflux MATE transporter YeeO;protein_id=WP_122985852.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3041016	3041091	.	+	.	ID=gene-PHA55_RS14905;Name=PHA55_RS14905;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS14905;old_locus_tag=PHA55_14900
NZ_CP116044.1	tRNAscan-SE	tRNA	3041016	3041091	.	+	.	ID=rna-PHA55_RS14905;Parent=gene-PHA55_RS14905;anticodon=(pos:3041049..3041051);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS14905;product=tRNA-Asn
NZ_CP116044.1	tRNAscan-SE	exon	3041016	3041091	.	+	.	ID=exon-PHA55_RS14905-1;Parent=rna-PHA55_RS14905;anticodon=(pos:3041049..3041051);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS14905;product=tRNA-Asn
NZ_CP116044.1	RefSeq	gene	3041129	3042079	.	-	.	ID=gene-PHA55_RS14910;Name=cbl;gbkey=Gene;gene=cbl;gene_biotype=protein_coding;locus_tag=PHA55_RS14910;old_locus_tag=PHA55_14905
NZ_CP116044.1	Protein Homology	CDS	3041129	3042079	.	-	0	ID=cds-WP_001011007.1;Parent=gene-PHA55_RS14910;Dbxref=Genbank:WP_001011007.1;Name=WP_001011007.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cbl;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416492.1;locus_tag=PHA55_RS14910;product=HTH-type transcriptional regulator Cbl;protein_id=WP_001011007.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3042181	3043098	.	-	.	ID=gene-PHA55_RS14915;Name=nac;gbkey=Gene;gene=nac;gene_biotype=protein_coding;locus_tag=PHA55_RS14915;old_locus_tag=PHA55_14910
NZ_CP116044.1	Protein Homology	CDS	3042181	3043098	.	-	0	ID=cds-WP_001011461.1;Parent=gene-PHA55_RS14915;Dbxref=Genbank:WP_001011461.1;Name=WP_001011461.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nac;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416493.1;locus_tag=PHA55_RS14915;product=nitrogen assimilation transcriptional regulator NAC;protein_id=WP_001011461.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3043425	3043500	.	+	.	ID=gene-PHA55_RS14920;Name=PHA55_RS14920;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS14920;old_locus_tag=PHA55_14915
NZ_CP116044.1	tRNAscan-SE	tRNA	3043425	3043500	.	+	.	ID=rna-PHA55_RS14920;Parent=gene-PHA55_RS14920;anticodon=(pos:3043458..3043460);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS14920;product=tRNA-Asn
NZ_CP116044.1	tRNAscan-SE	exon	3043425	3043500	.	+	.	ID=exon-PHA55_RS14920-1;Parent=rna-PHA55_RS14920;anticodon=(pos:3043458..3043460);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS14920;product=tRNA-Asn
NZ_CP116044.1	RefSeq	gene	3043556	3044491	.	-	.	ID=gene-PHA55_RS14925;Name=ldtA;gbkey=Gene;gene=ldtA;gene_biotype=protein_coding;locus_tag=PHA55_RS14925;old_locus_tag=PHA55_14920
NZ_CP116044.1	Protein Homology	CDS	3043556	3044491	.	-	0	ID=cds-WP_000986308.1;Parent=gene-PHA55_RS14925;Dbxref=Genbank:WP_000986308.1;Name=WP_000986308.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310812.2;locus_tag=PHA55_RS14925;product=L%2CD-transpeptidase;protein_id=WP_000986308.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3044553	3045632	.	-	.	ID=gene-PHA55_RS14930;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=PHA55_RS14930;old_locus_tag=PHA55_14925
NZ_CP116044.1	Protein Homology	CDS	3044553	3045632	.	-	0	ID=cds-WP_001193809.1;Parent=gene-PHA55_RS14930;Dbxref=Genbank:WP_001193809.1;Name=WP_001193809.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310813.1;locus_tag=PHA55_RS14930;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_001193809.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3045644	3046387	.	-	.	ID=gene-PHA55_RS14935;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=PHA55_RS14935;old_locus_tag=PHA55_14930
NZ_CP116044.1	Protein Homology	CDS	3045644	3046387	.	-	0	ID=cds-WP_001297350.1;Parent=gene-PHA55_RS14935;Dbxref=Genbank:WP_001297350.1;Name=WP_001297350.1;Ontology_term=GO:0009236,GO:0008818;gbkey=CDS;gene=cobS;go_function=cobalamin 5'-phosphate synthase activity|0008818||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310814.1;locus_tag=PHA55_RS14935;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_001297350.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3046384	3046929	.	-	.	ID=gene-PHA55_RS14940;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=PHA55_RS14940;old_locus_tag=PHA55_14935
NZ_CP116044.1	Protein Homology	CDS	3046384	3046929	.	-	0	ID=cds-WP_000973159.1;Parent=gene-PHA55_RS14940;Dbxref=Genbank:WP_000973159.1;Name=WP_000973159.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416497.1;locus_tag=PHA55_RS14940;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_000973159.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3047063	3047500	.	-	.	ID=gene-PHA55_RS14945;Name=PHA55_RS14945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS14945;old_locus_tag=PHA55_14940
NZ_CP116044.1	Protein Homology	CDS	3047063	3047500	.	-	0	ID=cds-WP_000849054.1;Parent=gene-PHA55_RS14945;Dbxref=Genbank:WP_000849054.1;Name=WP_000849054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524956.1;locus_tag=PHA55_RS14945;product=hypothetical protein;protein_id=WP_000849054.1;transl_table=11
NZ_CP116044.1	cmsearch	riboswitch	3047718	3047893	.	-	.	ID=id-NZ_CP116044.1:3047718..3047893;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
NZ_CP116044.1	RefSeq	gene	3047982	3048896	.	-	.	ID=gene-PHA55_RS14950;Name=pocR;gbkey=Gene;gene=pocR;gene_biotype=protein_coding;locus_tag=PHA55_RS14950;old_locus_tag=PHA55_14945
NZ_CP116044.1	Protein Homology	CDS	3047982	3048896	.	-	0	ID=cds-WP_000622048.1;Parent=gene-PHA55_RS14950;Dbxref=Genbank:WP_000622048.1;Name=WP_000622048.1;gbkey=CDS;gene=pocR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460981.1;locus_tag=PHA55_RS14950;product=regulatory protein PocR;protein_id=WP_000622048.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3049098	3049907	.	-	.	ID=gene-PHA55_RS14955;Name=pduF;gbkey=Gene;gene=pduF;gene_biotype=protein_coding;locus_tag=PHA55_RS14955;old_locus_tag=PHA55_14950
NZ_CP116044.1	Protein Homology	CDS	3049098	3049907	.	-	0	ID=cds-WP_001000035.1;Parent=gene-PHA55_RS14955;Dbxref=Genbank:WP_001000035.1;Name=WP_001000035.1;gbkey=CDS;gene=pduF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004016432.1;locus_tag=PHA55_RS14955;product=propanediol diffusion facilitator PduF;protein_id=WP_001000035.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3050540	3051235	.	-	.	ID=gene-PHA55_RS14960;Name=PHA55_RS14960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS14960;old_locus_tag=PHA55_14955
NZ_CP116044.1	Protein Homology	CDS	3050540	3051235	.	-	0	ID=cds-WP_063502193.1;Parent=gene-PHA55_RS14960;Dbxref=Genbank:WP_063502193.1;Name=WP_063502193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000514028.1;locus_tag=PHA55_RS14960;product=hypothetical protein;protein_id=WP_063502193.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3051186	3051371	.	-	.	ID=gene-PHA55_RS14965;Name=PHA55_RS14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS14965;old_locus_tag=PHA55_14960
NZ_CP116044.1	Protein Homology	CDS	3051186	3051371	.	-	0	ID=cds-WP_001372435.1;Parent=gene-PHA55_RS14965;Dbxref=Genbank:WP_001372435.1;Name=WP_001372435.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021626.2;locus_tag=PHA55_RS14965;product=Com family DNA-binding transcriptional regulator;protein_id=WP_001372435.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3051495	3052061	.	-	.	ID=gene-PHA55_RS14970;Name=PHA55_RS14970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS14970;old_locus_tag=PHA55_14965
NZ_CP116044.1	Protein Homology	CDS	3051495	3052061	.	-	0	ID=cds-WP_271287445.1;Parent=gene-PHA55_RS14970;Dbxref=Genbank:WP_271287445.1;Name=WP_271287445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001397959.1;locus_tag=PHA55_RS14970;product=DUF4376 domain-containing protein;protein_id=WP_271287445.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	3052379	3054313	.	-	.	ID=gene-PHA55_RS14975;Name=PHA55_RS14975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS14975;old_locus_tag=PHA55_14970;partial=true;pseudo=true;start_range=.,3052379
NZ_CP116044.1	Protein Homology	CDS	3052379	3054313	.	-	0	ID=cds-PHA55_RS14975;Parent=gene-PHA55_RS14975;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001135848.1;locus_tag=PHA55_RS14975;partial=true;product=prophage tail fiber N-terminal domain-containing protein;pseudo=true;start_range=.,3052379;transl_table=11
NZ_CP116044.1	RefSeq	gene	3054300	3054830	.	-	.	ID=gene-PHA55_RS14980;Name=PHA55_RS14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS14980;old_locus_tag=PHA55_14975
NZ_CP116044.1	Protein Homology	CDS	3054300	3054830	.	-	0	ID=cds-WP_271287446.1;Parent=gene-PHA55_RS14980;Dbxref=Genbank:WP_271287446.1;Name=WP_271287446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000423349.1;locus_tag=PHA55_RS14980;product=tail fiber assembly protein;protein_id=WP_271287446.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3054845	3055654	.	-	.	ID=gene-PHA55_RS14985;Name=PHA55_RS14985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS14985;old_locus_tag=PHA55_14980
NZ_CP116044.1	Protein Homology	CDS	3054845	3055654	.	-	0	ID=cds-WP_271287447.1;Parent=gene-PHA55_RS14985;Dbxref=Genbank:WP_271287447.1;Name=WP_271287447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000500225.1;locus_tag=PHA55_RS14985;product=phage tail protein;protein_id=WP_271287447.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3055658	3056242	.	-	.	ID=gene-PHA55_RS14990;Name=PHA55_RS14990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS14990;old_locus_tag=PHA55_14985
NZ_CP116044.1	Protein Homology	CDS	3055658	3056242	.	-	0	ID=cds-WP_000951402.1;Parent=gene-PHA55_RS14990;Dbxref=Genbank:WP_000951402.1;Name=WP_000951402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000951401.1;locus_tag=PHA55_RS14990;product=DUF2313 domain-containing protein;protein_id=WP_000951402.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3056227	3057303	.	-	.	ID=gene-PHA55_RS14995;Name=PHA55_RS14995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS14995;old_locus_tag=PHA55_14990
NZ_CP116044.1	Protein Homology	CDS	3056227	3057303	.	-	0	ID=cds-WP_271287448.1;Parent=gene-PHA55_RS14995;Dbxref=Genbank:WP_271287448.1;Name=WP_271287448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001146180.1;locus_tag=PHA55_RS14995;product=baseplate J/gp47 family protein;protein_id=WP_271287448.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3057293	3057718	.	-	.	ID=gene-PHA55_RS15000;Name=PHA55_RS15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15000;old_locus_tag=PHA55_14995
NZ_CP116044.1	Protein Homology	CDS	3057293	3057718	.	-	0	ID=cds-WP_001557417.1;Parent=gene-PHA55_RS15000;Dbxref=Genbank:WP_001557417.1;Name=WP_001557417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379682.1;locus_tag=PHA55_RS15000;product=phage GP46 family protein;protein_id=WP_001557417.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3057742	3058278	.	-	.	ID=gene-PHA55_RS15005;Name=PHA55_RS15005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15005;old_locus_tag=PHA55_15000
NZ_CP116044.1	Protein Homology	CDS	3057742	3058278	.	-	0	ID=cds-WP_271287449.1;Parent=gene-PHA55_RS15005;Dbxref=Genbank:WP_271287449.1;Name=WP_271287449.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000523893.1;locus_tag=PHA55_RS15005;product=phage baseplate assembly protein V;protein_id=WP_271287449.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3058269	3059342	.	-	.	ID=gene-PHA55_RS15010;Name=PHA55_RS15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15010;old_locus_tag=PHA55_15005
NZ_CP116044.1	Protein Homology	CDS	3058269	3059342	.	-	0	ID=cds-WP_271287450.1;Parent=gene-PHA55_RS15010;Dbxref=Genbank:WP_271287450.1;Name=WP_271287450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000446555.1;locus_tag=PHA55_RS15010;product=contractile injection system protein%2C VgrG/Pvc8 family;protein_id=WP_271287450.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3059342	3060616	.	-	.	ID=gene-PHA55_RS15015;Name=PHA55_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15015;old_locus_tag=PHA55_15010
NZ_CP116044.1	Protein Homology	CDS	3059342	3060616	.	-	0	ID=cds-WP_236508691.1;Parent=gene-PHA55_RS15015;Dbxref=Genbank:WP_236508691.1;Name=WP_236508691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001557420.1;locus_tag=PHA55_RS15015;product=DNA circularization N-terminal domain-containing protein;protein_id=WP_236508691.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3060616	3062481	.	-	.	ID=gene-PHA55_RS15020;Name=PHA55_RS15020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15020;old_locus_tag=PHA55_15015
NZ_CP116044.1	Protein Homology	CDS	3060616	3062481	.	-	0	ID=cds-WP_271287451.1;Parent=gene-PHA55_RS15020;Dbxref=Genbank:WP_271287451.1;Name=WP_271287451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000190547.1;locus_tag=PHA55_RS15020;product=phage tail tape measure protein;protein_id=WP_271287451.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3062568	3062963	.	-	.	ID=gene-PHA55_RS15025;Name=PHA55_RS15025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15025;old_locus_tag=PHA55_15020
NZ_CP116044.1	Protein Homology	CDS	3062568	3062963	.	-	0	ID=cds-WP_218314574.1;Parent=gene-PHA55_RS15025;Dbxref=Genbank:WP_218314574.1;Name=WP_218314574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829450.1;locus_tag=PHA55_RS15025;product=phage tail assembly protein;protein_id=WP_218314574.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3062965	3063321	.	-	.	ID=gene-PHA55_RS15030;Name=PHA55_RS15030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15030;old_locus_tag=PHA55_15025
NZ_CP116044.1	Protein Homology	CDS	3062965	3063321	.	-	0	ID=cds-WP_001062748.1;Parent=gene-PHA55_RS15030;Dbxref=Genbank:WP_001062748.1;Name=WP_001062748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001062747.1;locus_tag=PHA55_RS15030;product=phage tail tube protein;protein_id=WP_001062748.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3063331	3064806	.	-	.	ID=gene-PHA55_RS15035;Name=PHA55_RS15035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15035;old_locus_tag=PHA55_15030
NZ_CP116044.1	Protein Homology	CDS	3063331	3064806	.	-	0	ID=cds-WP_271287452.1;Parent=gene-PHA55_RS15035;Dbxref=Genbank:WP_271287452.1;Name=WP_271287452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000052046.1;locus_tag=PHA55_RS15035;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_271287452.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3064811	3065014	.	-	.	ID=gene-PHA55_RS15040;Name=PHA55_RS15040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15040;old_locus_tag=PHA55_15035
NZ_CP116044.1	Protein Homology	CDS	3064811	3065014	.	-	0	ID=cds-WP_096129350.1;Parent=gene-PHA55_RS15040;Dbxref=Genbank:WP_096129350.1;Name=WP_096129350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016239599.1;locus_tag=PHA55_RS15040;product=DUF2635 domain-containing protein;protein_id=WP_096129350.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3064995	3065606	.	-	.	ID=gene-PHA55_RS15045;Name=PHA55_RS15045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15045;old_locus_tag=PHA55_15040
NZ_CP116044.1	Protein Homology	CDS	3064995	3065606	.	-	0	ID=cds-WP_271287453.1;Parent=gene-PHA55_RS15045;Dbxref=Genbank:WP_271287453.1;Name=WP_271287453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001557426.1;locus_tag=PHA55_RS15045;product=hypothetical protein;protein_id=WP_271287453.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3065603	3066145	.	-	.	ID=gene-PHA55_RS15050;Name=PHA55_RS15050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15050;old_locus_tag=PHA55_15045
NZ_CP116044.1	Protein Homology	CDS	3065603	3066145	.	-	0	ID=cds-WP_196067426.1;Parent=gene-PHA55_RS15050;Dbxref=Genbank:WP_196067426.1;Name=WP_196067426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004114586.1;locus_tag=PHA55_RS15050;product=phage virion morphogenesis protein;protein_id=WP_196067426.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3066145	3066582	.	-	.	ID=gene-PHA55_RS15055;Name=PHA55_RS15055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15055;old_locus_tag=PHA55_15050
NZ_CP116044.1	Protein Homology	CDS	3066145	3066582	.	-	0	ID=cds-WP_000540583.1;Parent=gene-PHA55_RS15055;Dbxref=Genbank:WP_000540583.1;Name=WP_000540583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807456.1;locus_tag=PHA55_RS15055;product=DUF1320 domain-containing protein;protein_id=WP_000540583.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3066582	3066893	.	-	.	ID=gene-PHA55_RS15060;Name=PHA55_RS15060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15060;old_locus_tag=PHA55_15055
NZ_CP116044.1	Protein Homology	CDS	3066582	3066893	.	-	0	ID=cds-WP_113287245.1;Parent=gene-PHA55_RS15060;Dbxref=Genbank:WP_113287245.1;Name=WP_113287245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290362.1;locus_tag=PHA55_RS15060;product=hypothetical protein;protein_id=WP_113287245.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3066975	3067880	.	-	.	ID=gene-PHA55_RS15065;Name=PHA55_RS15065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15065;old_locus_tag=PHA55_15060
NZ_CP116044.1	Protein Homology	CDS	3066975	3067880	.	-	0	ID=cds-WP_063502206.1;Parent=gene-PHA55_RS15065;Dbxref=Genbank:WP_063502206.1;Name=WP_063502206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000501477.1;locus_tag=PHA55_RS15065;product=Mu-like prophage major head subunit gpT family protein;protein_id=WP_063502206.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3067880	3068842	.	-	.	ID=gene-PHA55_RS15070;Name=PHA55_RS15070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15070;old_locus_tag=PHA55_15065
NZ_CP116044.1	Protein Homology	CDS	3067880	3068842	.	-	0	ID=cds-WP_196067428.1;Parent=gene-PHA55_RS15070;Dbxref=Genbank:WP_196067428.1;Name=WP_196067428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001182210.1;locus_tag=PHA55_RS15070;product=phage protease;protein_id=WP_196067428.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3069057	3069821	.	-	.	ID=gene-PHA55_RS15075;Name=PHA55_RS15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15075;old_locus_tag=PHA55_15070
NZ_CP116044.1	Protein Homology	CDS	3069057	3069821	.	-	0	ID=cds-WP_271287454.1;Parent=gene-PHA55_RS15075;Dbxref=Genbank:WP_271287454.1;Name=WP_271287454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001209364.1;locus_tag=PHA55_RS15075;product=phage minor head protein;protein_id=WP_271287454.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3069814	3071385	.	-	.	ID=gene-PHA55_RS15080;Name=PHA55_RS15080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15080;old_locus_tag=PHA55_15075
NZ_CP116044.1	Protein Homology	CDS	3069814	3071385	.	-	0	ID=cds-WP_159390730.1;Parent=gene-PHA55_RS15080;Dbxref=Genbank:WP_159390730.1;Name=WP_159390730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001049972.1;locus_tag=PHA55_RS15080;product=DUF935 domain-containing protein;protein_id=WP_159390730.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3071382	3072917	.	-	.	ID=gene-PHA55_RS15085;Name=PHA55_RS15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15085;old_locus_tag=PHA55_15080
NZ_CP116044.1	Protein Homology	CDS	3071382	3072917	.	-	0	ID=cds-WP_271287455.1;Parent=gene-PHA55_RS15085;Dbxref=Genbank:WP_271287455.1;Name=WP_271287455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000192880.1;locus_tag=PHA55_RS15085;product=terminase family protein;protein_id=WP_271287455.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3072914	3073495	.	-	.	ID=gene-PHA55_RS15090;Name=PHA55_RS15090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15090;old_locus_tag=PHA55_15085
NZ_CP116044.1	Protein Homology	CDS	3072914	3073495	.	-	0	ID=cds-WP_257122835.1;Parent=gene-PHA55_RS15090;Dbxref=Genbank:WP_257122835.1;Name=WP_257122835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000426825.1;locus_tag=PHA55_RS15090;product=DUF3486 family protein;protein_id=WP_257122835.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3073485	3073643	.	-	.	ID=gene-PHA55_RS15095;Name=PHA55_RS15095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15095;old_locus_tag=PHA55_15090
NZ_CP116044.1	Protein Homology	CDS	3073485	3073643	.	-	0	ID=cds-WP_170981737.1;Parent=gene-PHA55_RS15095;Dbxref=Genbank:WP_170981737.1;Name=WP_170981737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001080358.1;locus_tag=PHA55_RS15095;product=hypothetical protein;protein_id=WP_170981737.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3073633	3073932	.	-	.	ID=gene-PHA55_RS15100;Name=PHA55_RS15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15100;old_locus_tag=PHA55_15095
NZ_CP116044.1	Protein Homology	CDS	3073633	3073932	.	-	0	ID=cds-WP_040100367.1;Parent=gene-PHA55_RS15100;Dbxref=Genbank:WP_040100367.1;Name=WP_040100367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000101555.1;locus_tag=PHA55_RS15100;product=hypothetical protein;protein_id=WP_040100367.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3073935	3074222	.	-	.	ID=gene-PHA55_RS15105;Name=PHA55_RS15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15105;old_locus_tag=PHA55_15100
NZ_CP116044.1	Protein Homology	CDS	3073935	3074222	.	-	0	ID=cds-WP_024168521.1;Parent=gene-PHA55_RS15105;Dbxref=Genbank:WP_024168521.1;Name=WP_024168521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005103431.1;locus_tag=PHA55_RS15105;product=hypothetical protein;protein_id=WP_024168521.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3074228	3074533	.	-	.	ID=gene-PHA55_RS15110;Name=PHA55_RS15110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15110;old_locus_tag=PHA55_15105
NZ_CP116044.1	Protein Homology	CDS	3074228	3074533	.	-	0	ID=cds-WP_001397890.1;Parent=gene-PHA55_RS15110;Dbxref=Genbank:WP_001397890.1;Name=WP_001397890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001372558.1;locus_tag=PHA55_RS15110;product=DUF2730 family protein;protein_id=WP_001397890.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3074518	3074745	.	-	.	ID=gene-PHA55_RS15115;Name=PHA55_RS15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15115;old_locus_tag=PHA55_15110
NZ_CP116044.1	Protein Homology	CDS	3074518	3074745	.	-	0	ID=cds-WP_271287456.1;Parent=gene-PHA55_RS15115;Dbxref=Genbank:WP_271287456.1;Name=WP_271287456.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000128965.1;locus_tag=PHA55_RS15115;product=TraR/DksA C4-type zinc finger protein;protein_id=WP_271287456.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3074742	3075350	.	-	.	ID=gene-PHA55_RS15120;Name=PHA55_RS15120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15120;old_locus_tag=PHA55_15115
NZ_CP116044.1	Protein Homology	CDS	3074742	3075350	.	-	0	ID=cds-WP_271287457.1;Parent=gene-PHA55_RS15120;Dbxref=Genbank:WP_271287457.1;Name=WP_271287457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000371430.1;locus_tag=PHA55_RS15120;product=hypothetical protein;protein_id=WP_271287457.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3075338	3075748	.	-	.	ID=gene-PHA55_RS15125;Name=PHA55_RS15125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15125;old_locus_tag=PHA55_15120
NZ_CP116044.1	Protein Homology	CDS	3075338	3075748	.	-	0	ID=cds-WP_271287458.1;Parent=gene-PHA55_RS15125;Dbxref=Genbank:WP_271287458.1;Name=WP_271287458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005110321.1;locus_tag=PHA55_RS15125;product=hypothetical protein;protein_id=WP_271287458.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3075732	3075959	.	-	.	ID=gene-PHA55_RS15130;Name=PHA55_RS15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15130;old_locus_tag=PHA55_15125
NZ_CP116044.1	Protein Homology	CDS	3075732	3075959	.	-	0	ID=cds-WP_040088621.1;Parent=gene-PHA55_RS15130;Dbxref=Genbank:WP_040088621.1;Name=WP_040088621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000515803.1;locus_tag=PHA55_RS15130;product=hypothetical protein;protein_id=WP_040088621.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3075961	3076557	.	-	.	ID=gene-PHA55_RS15135;Name=PHA55_RS15135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15135;old_locus_tag=PHA55_15130
NZ_CP116044.1	Protein Homology	CDS	3075961	3076557	.	-	0	ID=cds-WP_105281978.1;Parent=gene-PHA55_RS15135;Dbxref=Genbank:WP_105281978.1;Name=WP_105281978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000431265.1;locus_tag=PHA55_RS15135;product=N-acetylmuramidase;protein_id=WP_105281978.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3076643	3077092	.	-	.	ID=gene-PHA55_RS15140;Name=PHA55_RS15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15140;old_locus_tag=PHA55_15135
NZ_CP116044.1	Protein Homology	CDS	3076643	3077092	.	-	0	ID=cds-WP_040100375.1;Parent=gene-PHA55_RS15140;Dbxref=Genbank:WP_040100375.1;Name=WP_040100375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000812146.1;locus_tag=PHA55_RS15140;product=Mor transcription activator family protein;protein_id=WP_040100375.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3077089	3077640	.	-	.	ID=gene-PHA55_RS15145;Name=PHA55_RS15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15145;old_locus_tag=PHA55_15140
NZ_CP116044.1	Protein Homology	CDS	3077089	3077640	.	-	0	ID=cds-WP_271287459.1;Parent=gene-PHA55_RS15145;Dbxref=Genbank:WP_271287459.1;Name=WP_271287459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000091783.1;locus_tag=PHA55_RS15145;product=regulatory protein GemA;protein_id=WP_271287459.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3077618	3077953	.	-	.	ID=gene-PHA55_RS15150;Name=PHA55_RS15150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15150;old_locus_tag=PHA55_15145
NZ_CP116044.1	Protein Homology	CDS	3077618	3077953	.	-	0	ID=cds-WP_271287460.1;Parent=gene-PHA55_RS15150;Dbxref=Genbank:WP_271287460.1;Name=WP_271287460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000701639.1;locus_tag=PHA55_RS15150;product=hypothetical protein;protein_id=WP_271287460.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3077931	3078128	.	-	.	ID=gene-PHA55_RS15155;Name=PHA55_RS15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15155;old_locus_tag=PHA55_15150
NZ_CP116044.1	Protein Homology	CDS	3077931	3078128	.	-	0	ID=cds-WP_032239578.1;Parent=gene-PHA55_RS15155;Dbxref=Genbank:WP_032239578.1;Name=WP_032239578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000597367.1;locus_tag=PHA55_RS15155;product=hypothetical protein;protein_id=WP_032239578.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3078121	3078660	.	-	.	ID=gene-PHA55_RS15160;Name=PHA55_RS15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15160;old_locus_tag=PHA55_15155
NZ_CP116044.1	Protein Homology	CDS	3078121	3078660	.	-	0	ID=cds-WP_271287461.1;Parent=gene-PHA55_RS15160;Dbxref=Genbank:WP_271287461.1;Name=WP_271287461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000564291.1;locus_tag=PHA55_RS15160;product=hypothetical protein;protein_id=WP_271287461.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3078758	3079282	.	-	.	ID=gene-PHA55_RS15165;Name=PHA55_RS15165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15165;old_locus_tag=PHA55_15160
NZ_CP116044.1	Protein Homology	CDS	3078758	3079282	.	-	0	ID=cds-WP_001107934.1;Parent=gene-PHA55_RS15165;Dbxref=Genbank:WP_001107934.1;Name=WP_001107934.1;Ontology_term=GO:0042262,GO:0003690;gbkey=CDS;go_function=double-stranded DNA binding|0003690||IEA;go_process=DNA protection|0042262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001473237.1;locus_tag=PHA55_RS15165;product=host-nuclease inhibitor Gam family protein;protein_id=WP_001107934.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3079303	3079590	.	-	.	ID=gene-PHA55_RS15170;Name=PHA55_RS15170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15170;old_locus_tag=PHA55_15165
NZ_CP116044.1	Protein Homology	CDS	3079303	3079590	.	-	0	ID=cds-WP_109955402.1;Parent=gene-PHA55_RS15170;Dbxref=Genbank:WP_109955402.1;Name=WP_109955402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000650004.1;locus_tag=PHA55_RS15170;product=hypothetical protein;protein_id=WP_109955402.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3079610	3079879	.	-	.	ID=gene-PHA55_RS15175;Name=PHA55_RS15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15175;old_locus_tag=PHA55_15170
NZ_CP116044.1	Protein Homology	CDS	3079610	3079879	.	-	0	ID=cds-WP_001151278.1;Parent=gene-PHA55_RS15175;Dbxref=Genbank:WP_001151278.1;Name=WP_001151278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151278.1;locus_tag=PHA55_RS15175;product=hypothetical protein;protein_id=WP_001151278.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3079912	3080139	.	-	.	ID=gene-PHA55_RS15180;Name=PHA55_RS15180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15180;old_locus_tag=PHA55_15175
NZ_CP116044.1	Protein Homology	CDS	3079912	3080139	.	-	0	ID=cds-WP_000987801.1;Parent=gene-PHA55_RS15180;Dbxref=Genbank:WP_000987801.1;Name=WP_000987801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000987800.1;locus_tag=PHA55_RS15180;product=hypothetical protein;protein_id=WP_000987801.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3080153	3081091	.	-	.	ID=gene-PHA55_RS15185;Name=PHA55_RS15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15185;old_locus_tag=PHA55_15180
NZ_CP116044.1	Protein Homology	CDS	3080153	3081091	.	-	0	ID=cds-WP_001026713.1;Parent=gene-PHA55_RS15185;Dbxref=Genbank:WP_001026713.1;Name=WP_001026713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001557452.1;locus_tag=PHA55_RS15185;product=AAA family ATPase;protein_id=WP_001026713.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3081130	3083118	.	-	.	ID=gene-PHA55_RS15190;Name=PHA55_RS15190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15190;old_locus_tag=PHA55_15185
NZ_CP116044.1	Protein Homology	CDS	3081130	3083118	.	-	0	ID=cds-WP_271287462.1;Parent=gene-PHA55_RS15190;Dbxref=Genbank:WP_271287462.1;Name=WP_271287462.1;Ontology_term=GO:0006313,GO:0015074,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001683974.1;locus_tag=PHA55_RS15190;product=transposase domain-containing protein;protein_id=WP_271287462.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3083126	3083347	.	-	.	ID=gene-PHA55_RS15195;Name=PHA55_RS15195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15195;old_locus_tag=PHA55_15190
NZ_CP116044.1	Protein Homology	CDS	3083126	3083347	.	-	0	ID=cds-WP_000551058.1;Parent=gene-PHA55_RS15195;Dbxref=Genbank:WP_000551058.1;Name=WP_000551058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000551058.1;locus_tag=PHA55_RS15195;product=helix-turn-helix transcriptional regulator;protein_id=WP_000551058.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3083533	3084057	.	+	.	ID=gene-PHA55_RS15200;Name=PHA55_RS15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15200;old_locus_tag=PHA55_15195
NZ_CP116044.1	Protein Homology	CDS	3083533	3084057	.	+	0	ID=cds-WP_063502223.1;Parent=gene-PHA55_RS15200;Dbxref=Genbank:WP_063502223.1;Name=WP_063502223.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000986830.1;locus_tag=PHA55_RS15200;product=DNA-binding protein;protein_id=WP_063502223.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3084396	3084680	.	+	.	ID=gene-PHA55_RS15205;Name=pduA;gbkey=Gene;gene=pduA;gene_biotype=protein_coding;locus_tag=PHA55_RS15205;old_locus_tag=PHA55_15200
NZ_CP116044.1	Protein Homology	CDS	3084396	3084680	.	+	0	ID=cds-WP_001183616.1;Parent=gene-PHA55_RS15205;Dbxref=Genbank:WP_001183616.1;Name=WP_001183616.1;gbkey=CDS;gene=pduA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001183614.1;locus_tag=PHA55_RS15205;product=propanediol utilization microcompartment protein PduA;protein_id=WP_001183616.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3084677	3085489	.	+	.	ID=gene-PHA55_RS15210;Name=pduB;gbkey=Gene;gene=pduB;gene_biotype=protein_coding;locus_tag=PHA55_RS15210;old_locus_tag=PHA55_15205
NZ_CP116044.1	Protein Homology	CDS	3084677	3085489	.	+	0	ID=cds-WP_000097480.1;Parent=gene-PHA55_RS15210;Dbxref=Genbank:WP_000097480.1;Name=WP_000097480.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=pduB;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228567.1;locus_tag=PHA55_RS15210;product=propanediol utilization microcompartment protein PduB;protein_id=WP_000097480.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3085508	3087172	.	+	.	ID=gene-PHA55_RS15215;Name=pduC;gbkey=Gene;gene=pduC;gene_biotype=protein_coding;locus_tag=PHA55_RS15215;old_locus_tag=PHA55_15210
NZ_CP116044.1	Protein Homology	CDS	3085508	3087172	.	+	0	ID=cds-WP_001256917.1;Parent=gene-PHA55_RS15215;Dbxref=Genbank:WP_001256917.1;Name=WP_001256917.1;gbkey=CDS;gene=pduC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460985.1;locus_tag=PHA55_RS15215;product=propanediol dehydratase large subunit PduC;protein_id=WP_001256917.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3087182	3087850	.	+	.	ID=gene-PHA55_RS15220;Name=PHA55_RS15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15220;old_locus_tag=PHA55_15215
NZ_CP116044.1	Protein Homology	CDS	3087182	3087850	.	+	0	ID=cds-WP_000405033.1;Parent=gene-PHA55_RS15220;Dbxref=Genbank:WP_000405033.1;Name=WP_000405033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004016448.1;locus_tag=PHA55_RS15220;product=propanediol/glycerol family dehydratase medium subunit;protein_id=WP_000405033.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3087865	3088383	.	+	.	ID=gene-PHA55_RS15225;Name=pduE;gbkey=Gene;gene=pduE;gene_biotype=protein_coding;locus_tag=PHA55_RS15225;old_locus_tag=PHA55_15220
NZ_CP116044.1	Protein Homology	CDS	3087865	3088383	.	+	0	ID=cds-WP_001090583.1;Parent=gene-PHA55_RS15225;Dbxref=Genbank:WP_001090583.1;Name=WP_001090583.1;gbkey=CDS;gene=pduE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460987.1;locus_tag=PHA55_RS15225;product=propanediol dehydratase small subunit PduE;protein_id=WP_001090583.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3088393	3090225	.	+	.	ID=gene-PHA55_RS15230;Name=PHA55_RS15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15230;old_locus_tag=PHA55_15225
NZ_CP116044.1	Protein Homology	CDS	3088393	3090225	.	+	0	ID=cds-WP_001268912.1;Parent=gene-PHA55_RS15230;Dbxref=Genbank:WP_001268912.1;Name=WP_001268912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460988.1;locus_tag=PHA55_RS15230;product=diol dehydratase reactivase subunit alpha;protein_id=WP_001268912.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3090215	3090565	.	+	.	ID=gene-PHA55_RS15235;Name=PHA55_RS15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15235;old_locus_tag=PHA55_15230
NZ_CP116044.1	Protein Homology	CDS	3090215	3090565	.	+	0	ID=cds-WP_000444001.1;Parent=gene-PHA55_RS15235;Dbxref=Genbank:WP_000444001.1;Name=WP_000444001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000443999.1;locus_tag=PHA55_RS15235;product=glycerol dehydratase reactivase beta/small subunit family protein;protein_id=WP_000444001.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3090585	3090860	.	+	.	ID=gene-PHA55_RS15240;Name=pduJ;gbkey=Gene;gene=pduJ;gene_biotype=protein_coding;locus_tag=PHA55_RS15240;old_locus_tag=PHA55_15235
NZ_CP116044.1	Protein Homology	CDS	3090585	3090860	.	+	0	ID=cds-WP_001057752.1;Parent=gene-PHA55_RS15240;Dbxref=Genbank:WP_001057752.1;Name=WP_001057752.1;gbkey=CDS;gene=pduJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460990.1;locus_tag=PHA55_RS15240;product=propanediol utilization microcompartment protein PduJ;protein_id=WP_001057752.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3090884	3091306	.	+	.	ID=gene-PHA55_RS15245;Name=PHA55_RS15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15245;old_locus_tag=PHA55_15240
NZ_CP116044.1	Protein Homology	CDS	3090884	3091306	.	+	0	ID=cds-WP_000814166.1;Parent=gene-PHA55_RS15245;Dbxref=Genbank:WP_000814166.1;Name=WP_000814166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001607636.1;locus_tag=PHA55_RS15245;product=BMC domain-containing protein;protein_id=WP_000814166.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3091309	3091941	.	+	.	ID=gene-PHA55_RS15250;Name=PHA55_RS15250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15250;old_locus_tag=PHA55_15245
NZ_CP116044.1	Protein Homology	CDS	3091309	3091941	.	+	0	ID=cds-WP_033817080.1;Parent=gene-PHA55_RS15250;Dbxref=Genbank:WP_033817080.1;Name=WP_033817080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000361033.1;locus_tag=PHA55_RS15250;product=phosphate propanoyltransferase;protein_id=WP_033817080.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3091938	3092429	.	+	.	ID=gene-PHA55_RS15255;Name=pduM;gbkey=Gene;gene=pduM;gene_biotype=protein_coding;locus_tag=PHA55_RS15255;old_locus_tag=PHA55_15250
NZ_CP116044.1	Protein Homology	CDS	3091938	3092429	.	+	0	ID=cds-WP_001061903.1;Parent=gene-PHA55_RS15255;Dbxref=Genbank:WP_001061903.1;Name=WP_001061903.1;gbkey=CDS;gene=pduM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001061905.1;locus_tag=PHA55_RS15255;product=microcompartment protein PduM;protein_id=WP_001061903.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3092433	3092708	.	+	.	ID=gene-PHA55_RS15260;Name=PHA55_RS15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15260;old_locus_tag=PHA55_15255
NZ_CP116044.1	Protein Homology	CDS	3092433	3092708	.	+	0	ID=cds-WP_000549822.1;Parent=gene-PHA55_RS15260;Dbxref=Genbank:WP_000549822.1;Name=WP_000549822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228577.1;locus_tag=PHA55_RS15260;product=EutN/CcmL family microcompartment protein;protein_id=WP_000549822.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3092720	3093727	.	+	.	ID=gene-PHA55_RS15265;Name=pduO;gbkey=Gene;gene=pduO;gene_biotype=protein_coding;locus_tag=PHA55_RS15265;old_locus_tag=PHA55_15260
NZ_CP116044.1	Protein Homology	CDS	3092720	3093727	.	+	0	ID=cds-WP_001029509.1;Parent=gene-PHA55_RS15265;Dbxref=Genbank:WP_001029509.1;Name=WP_001029509.1;gbkey=CDS;gene=pduO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460995.1;locus_tag=PHA55_RS15265;product=two-domain cob(I)yrinic acid a%2Cc-diamide adenosyltransferase PduO;protein_id=WP_001029509.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3093724	3095109	.	+	.	ID=gene-PHA55_RS15270;Name=pduP;gbkey=Gene;gene=pduP;gene_biotype=protein_coding;locus_tag=PHA55_RS15270;old_locus_tag=PHA55_15265
NZ_CP116044.1	Protein Homology	CDS	3093724	3095109	.	+	0	ID=cds-WP_001065574.1;Parent=gene-PHA55_RS15270;Dbxref=Genbank:WP_001065574.1;Name=WP_001065574.1;gbkey=CDS;gene=pduP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460996.1;locus_tag=PHA55_RS15270;product=CoA-acylating propionaldehyde dehydrogenase PduP;protein_id=WP_001065574.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3095120	3096232	.	+	.	ID=gene-PHA55_RS15275;Name=PHA55_RS15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15275;old_locus_tag=PHA55_15270
NZ_CP116044.1	Protein Homology	CDS	3095120	3096232	.	+	0	ID=cds-WP_001091439.1;Parent=gene-PHA55_RS15275;Dbxref=Genbank:WP_001091439.1;Name=WP_001091439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016158487.1;locus_tag=PHA55_RS15275;product=iron-containing alcohol dehydrogenase;protein_id=WP_001091439.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3096229	3097572	.	+	.	ID=gene-PHA55_RS15280;Name=PHA55_RS15280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15280;old_locus_tag=PHA55_15275
NZ_CP116044.1	Protein Homology	CDS	3096229	3097572	.	+	0	ID=cds-WP_001101302.1;Parent=gene-PHA55_RS15280;Dbxref=Genbank:WP_001101302.1;Name=WP_001101302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001585845.1;locus_tag=PHA55_RS15280;product=SLBB domain-containing protein;protein_id=WP_001101302.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3097575	3098129	.	+	.	ID=gene-PHA55_RS15285;Name=pduT;gbkey=Gene;gene=pduT;gene_biotype=protein_coding;locus_tag=PHA55_RS15285;old_locus_tag=PHA55_15280
NZ_CP116044.1	Protein Homology	CDS	3097575	3098129	.	+	0	ID=cds-WP_000030728.1;Parent=gene-PHA55_RS15285;Dbxref=Genbank:WP_000030728.1;Name=WP_000030728.1;gbkey=CDS;gene=pduT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460999.1;locus_tag=PHA55_RS15285;product=propanediol utilization microcompartment protein PduT;protein_id=WP_000030728.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3098129	3098479	.	+	.	ID=gene-PHA55_RS15290;Name=pduU;gbkey=Gene;gene=pduU;gene_biotype=protein_coding;locus_tag=PHA55_RS15290;old_locus_tag=PHA55_15285
NZ_CP116044.1	Protein Homology	CDS	3098129	3098479	.	+	0	ID=cds-WP_000211393.1;Parent=gene-PHA55_RS15290;Dbxref=Genbank:WP_000211393.1;Name=WP_000211393.1;gbkey=CDS;gene=pduU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000441103.1;locus_tag=PHA55_RS15290;product=propanediol utilization microcompartment protein PduU;protein_id=WP_000211393.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3098484	3098927	.	+	.	ID=gene-PHA55_RS15295;Name=PHA55_RS15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15295;old_locus_tag=PHA55_15290
NZ_CP116044.1	Protein Homology	CDS	3098484	3098927	.	+	0	ID=cds-WP_001369832.1;Parent=gene-PHA55_RS15295;Dbxref=Genbank:WP_001369832.1;Name=WP_001369832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001585847.1;locus_tag=PHA55_RS15295;product=EutP/PduV family microcompartment system protein;protein_id=WP_001369832.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3099028	3099357	.	-	.	ID=gene-PHA55_RS15300;Name=tmaR;gbkey=Gene;gene=tmaR;gene_biotype=protein_coding;locus_tag=PHA55_RS15300;old_locus_tag=PHA55_15295
NZ_CP116044.1	Protein Homology	CDS	3099028	3099357	.	-	0	ID=cds-WP_000450409.1;Parent=gene-PHA55_RS15300;Dbxref=Genbank:WP_000450409.1;Name=WP_000450409.1;gbkey=CDS;gene=tmaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310836.2;locus_tag=PHA55_RS15300;product=DUF496 family protein;protein_id=WP_000450409.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3099529	3100587	.	-	.	ID=gene-PHA55_RS15305;Name=yeeA;gbkey=Gene;gene=yeeA;gene_biotype=protein_coding;locus_tag=PHA55_RS15305;old_locus_tag=PHA55_15300
NZ_CP116044.1	Protein Homology	CDS	3099529	3100587	.	-	0	ID=cds-WP_001200891.1;Parent=gene-PHA55_RS15305;Dbxref=Genbank:WP_001200891.1;Name=WP_001200891.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;gene=yeeA;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416512.1;locus_tag=PHA55_RS15305;product=FUSC family protein;protein_id=WP_001200891.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3100785	3101258	.	-	.	ID=gene-PHA55_RS15310;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;locus_tag=PHA55_RS15310;old_locus_tag=PHA55_15305
NZ_CP116044.1	Protein Homology	CDS	3100785	3101258	.	-	0	ID=cds-WP_001105415.1;Parent=gene-PHA55_RS15310;Dbxref=Genbank:WP_001105415.1;Name=WP_001105415.1;gbkey=CDS;gene=sbmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416513.1;locus_tag=PHA55_RS15310;product=DNA gyrase inhibitor SbmC;protein_id=WP_001105415.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3101377	3102543	.	-	.	ID=gene-PHA55_RS15315;Name=dacD;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;locus_tag=PHA55_RS15315;old_locus_tag=PHA55_15310
NZ_CP116044.1	Protein Homology	CDS	3101377	3102543	.	-	0	ID=cds-WP_001296209.1;Parent=gene-PHA55_RS15315;Dbxref=Genbank:WP_001296209.1;Name=WP_001296209.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacD;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416514.4;locus_tag=PHA55_RS15315;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=WP_001296209.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3102752	3104179	.	+	.	ID=gene-PHA55_RS15320;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=PHA55_RS15320;old_locus_tag=PHA55_15315
NZ_CP116044.1	Protein Homology	CDS	3102752	3104179	.	+	0	ID=cds-WP_000980597.1;Parent=gene-PHA55_RS15320;Dbxref=Genbank:WP_000980597.1;Name=WP_000980597.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008852;gbkey=CDS;gene=sbcB;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,exodeoxyribonuclease I activity|0008852||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416515.1;locus_tag=PHA55_RS15320;product=exodeoxyribonuclease I;protein_id=WP_000980597.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3104222	3104449	.	-	.	ID=gene-PHA55_RS15325;Name=tsuB;gbkey=Gene;gene=tsuB;gene_biotype=protein_coding;locus_tag=PHA55_RS15325;old_locus_tag=PHA55_15320
NZ_CP116044.1	Protein Homology	CDS	3104222	3104449	.	-	0	ID=cds-WP_000985273.1;Parent=gene-PHA55_RS15325;Dbxref=Genbank:WP_000985273.1;Name=WP_000985273.1;gbkey=CDS;gene=tsuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310841.1;locus_tag=PHA55_RS15325;product=thiosulfate utilization sulfurtransferase TsuB/YeeD;protein_id=WP_000985273.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3104463	3105521	.	-	.	ID=gene-PHA55_RS15330;Name=tsuA;gbkey=Gene;gene=tsuA;gene_biotype=protein_coding;locus_tag=PHA55_RS15330;old_locus_tag=PHA55_15325
NZ_CP116044.1	Protein Homology	CDS	3104463	3105521	.	-	0	ID=cds-WP_000492346.1;Parent=gene-PHA55_RS15330;Dbxref=Genbank:WP_000492346.1;Name=WP_000492346.1;gbkey=CDS;gene=tsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416517.1;locus_tag=PHA55_RS15330;product=thiosulfate utilization transporter TsuA/YeeE;protein_id=WP_000492346.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3105700	3107058	.	-	.	ID=gene-PHA55_RS15335;Name=plaP;gbkey=Gene;gene=plaP;gene_biotype=protein_coding;locus_tag=PHA55_RS15335;old_locus_tag=PHA55_15330
NZ_CP116044.1	Protein Homology	CDS	3105700	3107058	.	-	0	ID=cds-WP_000019197.1;Parent=gene-PHA55_RS15335;Dbxref=Genbank:WP_000019197.1;Name=WP_000019197.1;gbkey=CDS;gene=plaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416518.2;locus_tag=PHA55_RS15335;product=putrescine/proton symporter PlaP;protein_id=WP_000019197.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3107048	3107110	.	-	.	ID=gene-PHA55_RS15340;Name=yoeI;gbkey=Gene;gene=yoeI;gene_biotype=protein_coding;locus_tag=PHA55_RS15340;old_locus_tag=PHA55_15335
NZ_CP116044.1	Protein Homology	CDS	3107048	3107110	.	-	0	ID=cds-WP_010723108.1;Parent=gene-PHA55_RS15340;Dbxref=Genbank:WP_010723108.1;Name=WP_010723108.1;gbkey=CDS;gene=yoeI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791246.1;locus_tag=PHA55_RS15340;product=membrane protein YoeI;protein_id=WP_010723108.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3107325	3108254	.	-	.	ID=gene-PHA55_RS15345;Name=yeeY;gbkey=Gene;gene=yeeY;gene_biotype=protein_coding;locus_tag=PHA55_RS15345;old_locus_tag=PHA55_15340
NZ_CP116044.1	Protein Homology	CDS	3107325	3108254	.	-	0	ID=cds-WP_000803351.1;Parent=gene-PHA55_RS15345;Dbxref=Genbank:WP_000803351.1;Name=WP_000803351.1;gbkey=CDS;gene=yeeY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416519.4;locus_tag=PHA55_RS15345;product=LysR substrate-binding domain-containing protein;protein_id=WP_000803351.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3108300	3109124	.	-	.	ID=gene-PHA55_RS15350;Name=yeeZ;gbkey=Gene;gene=yeeZ;gene_biotype=protein_coding;locus_tag=PHA55_RS15350;old_locus_tag=PHA55_15345
NZ_CP116044.1	Protein Homology	CDS	3108300	3109124	.	-	0	ID=cds-WP_000754749.1;Parent=gene-PHA55_RS15350;Dbxref=Genbank:WP_000754749.1;Name=WP_000754749.1;gbkey=CDS;gene=yeeZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310845.1;locus_tag=PHA55_RS15350;product=SDR family oxidoreductase;protein_id=WP_000754749.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3109207	3109461	.	-	.	ID=gene-PHA55_RS15355;Name=yoeB;gbkey=Gene;gene=yoeB;gene_biotype=protein_coding;locus_tag=PHA55_RS15355;old_locus_tag=PHA55_15350
NZ_CP116044.1	Protein Homology	CDS	3109207	3109461	.	-	0	ID=cds-WP_000767829.1;Parent=gene-PHA55_RS15355;Dbxref=Genbank:WP_000767829.1;Name=WP_000767829.1;gbkey=CDS;gene=yoeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707909.1;locus_tag=PHA55_RS15355;product=type II toxin-antitoxin system mRNA interferase toxin YoeB;protein_id=WP_000767829.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3109458	3109709	.	-	.	ID=gene-PHA55_RS15360;Name=yefM;gbkey=Gene;gene=yefM;gene_biotype=protein_coding;locus_tag=PHA55_RS15360;old_locus_tag=PHA55_15355
NZ_CP116044.1	Protein Homology	CDS	3109458	3109709	.	-	0	ID=cds-WP_001259255.1;Parent=gene-PHA55_RS15360;Dbxref=Genbank:WP_001259255.1;Name=WP_001259255.1;gbkey=CDS;gene=yefM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416521.2;locus_tag=PHA55_RS15360;product=YoeB-YefM toxin-antitoxin system antitoxin YefM;protein_id=WP_001259255.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3109992	3110042	.	+	.	ID=gene-PHA55_RS15365;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=PHA55_RS15365;old_locus_tag=PHA55_15360
NZ_CP116044.1	Protein Homology	CDS	3109992	3110042	.	+	0	ID=cds-WP_001364200.1;Parent=gene-PHA55_RS15365;Dbxref=Genbank:WP_001364200.1;Name=WP_001364200.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416522.1;locus_tag=PHA55_RS15365;product=his operon leader peptide;protein_id=WP_001364200.1;transl_table=11
NZ_CP116044.1	cmsearch	sequence_feature	3110018	3110141	.	+	.	ID=id-NZ_CP116044.1:3110018..3110141;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1
NZ_CP116044.1	RefSeq	gene	3110188	3111087	.	+	.	ID=gene-PHA55_RS15370;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=PHA55_RS15370;old_locus_tag=PHA55_15365
NZ_CP116044.1	Protein Homology	CDS	3110188	3111087	.	+	0	ID=cds-WP_000131782.1;Parent=gene-PHA55_RS15370;Dbxref=Genbank:WP_000131782.1;Name=WP_000131782.1;Ontology_term=GO:0000105,GO:0003879;gbkey=CDS;gene=hisG;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=PHA55_RS15370;product=ATP phosphoribosyltransferase;protein_id=WP_000131782.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3111093	3112397	.	+	.	ID=gene-PHA55_RS15375;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=PHA55_RS15375;old_locus_tag=PHA55_15370
NZ_CP116044.1	Protein Homology	CDS	3111093	3112397	.	+	0	ID=cds-WP_001349967.1;Parent=gene-PHA55_RS15375;Dbxref=Genbank:WP_001349967.1;Name=WP_001349967.1;Ontology_term=GO:0000105,GO:0004399;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416524.1;locus_tag=PHA55_RS15375;product=histidinol dehydrogenase;protein_id=WP_001349967.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3112394	3113464	.	+	.	ID=gene-PHA55_RS15380;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=PHA55_RS15380;old_locus_tag=PHA55_15375
NZ_CP116044.1	Protein Homology	CDS	3112394	3113464	.	+	0	ID=cds-WP_000108955.1;Parent=gene-PHA55_RS15380;Dbxref=Genbank:WP_000108955.1;Name=WP_000108955.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416525.1;locus_tag=PHA55_RS15380;product=histidinol-phosphate transaminase;protein_id=WP_000108955.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3113464	3114531	.	+	.	ID=gene-PHA55_RS15385;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=PHA55_RS15385;old_locus_tag=PHA55_15380
NZ_CP116044.1	Protein Homology	CDS	3113464	3114531	.	+	0	ID=cds-WP_000080108.1;Parent=gene-PHA55_RS15385;Dbxref=Genbank:WP_000080108.1;Name=WP_000080108.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707917.2;locus_tag=PHA55_RS15385;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_000080108.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3114531	3115121	.	+	.	ID=gene-PHA55_RS15390;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=PHA55_RS15390;old_locus_tag=PHA55_15385
NZ_CP116044.1	Protein Homology	CDS	3114531	3115121	.	+	0	ID=cds-WP_016231037.1;Parent=gene-PHA55_RS15390;Dbxref=Genbank:WP_016231037.1;Name=WP_016231037.1;Ontology_term=GO:0000105,GO:0000107,GO:0016884;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA,carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=PHA55_RS15390;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_016231037.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3115121	3115858	.	+	.	ID=gene-PHA55_RS15395;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=PHA55_RS15395;old_locus_tag=PHA55_15390
NZ_CP116044.1	Protein Homology	CDS	3115121	3115858	.	+	0	ID=cds-WP_042099299.1;Parent=gene-PHA55_RS15395;Dbxref=Genbank:WP_042099299.1;Name=WP_042099299.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416528.2;locus_tag=PHA55_RS15395;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_042099299.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3115840	3116616	.	+	.	ID=gene-PHA55_RS15400;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=PHA55_RS15400;old_locus_tag=PHA55_15395
NZ_CP116044.1	Protein Homology	CDS	3115840	3116616	.	+	0	ID=cds-WP_000880182.1;Parent=gene-PHA55_RS15400;Dbxref=Genbank:WP_000880182.1;Name=WP_000880182.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310853.1;locus_tag=PHA55_RS15400;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_000880182.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3116610	3117221	.	+	.	ID=gene-PHA55_RS15405;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=PHA55_RS15405;old_locus_tag=PHA55_15400
NZ_CP116044.1	Protein Homology	CDS	3116610	3117221	.	+	0	ID=cds-WP_000954872.1;Parent=gene-PHA55_RS15405;Dbxref=Genbank:WP_000954872.1;Name=WP_000954872.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310854.1;locus_tag=PHA55_RS15405;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_000954872.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3117319	3118296	.	-	.	ID=gene-PHA55_RS15410;Name=wzzB;gbkey=Gene;gene=wzzB;gene_biotype=protein_coding;locus_tag=PHA55_RS15410;old_locus_tag=PHA55_15405
NZ_CP116044.1	Protein Homology	CDS	3117319	3118296	.	-	0	ID=cds-WP_042099300.1;Parent=gene-PHA55_RS15410;Dbxref=Genbank:WP_042099300.1;Name=WP_042099300.1;Ontology_term=GO:0009103;gbkey=CDS;gene=wzzB;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310855.3;locus_tag=PHA55_RS15410;product=LPS O-antigen chain length determinant protein WzzB;protein_id=WP_042099300.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3118443	3119609	.	-	.	ID=gene-PHA55_RS15415;Name=ugd;gbkey=Gene;gene=ugd;gene_biotype=protein_coding;locus_tag=PHA55_RS15415;old_locus_tag=PHA55_15410
NZ_CP116044.1	Protein Homology	CDS	3118443	3119609	.	-	0	ID=cds-WP_042099301.1;Parent=gene-PHA55_RS15415;Dbxref=Genbank:WP_042099301.1;Name=WP_042099301.1;Ontology_term=GO:0000271,GO:0003979;gbkey=CDS;gene=ugd;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416532.1;locus_tag=PHA55_RS15415;product=UDP-glucose 6-dehydrogenase;protein_id=WP_042099301.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	3119815	3120950	.	-	.	ID=gene-PHA55_RS15420;Name=PHA55_RS15420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS15420;old_locus_tag=PHA55_15415;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	3119815	3120950	.	-	0	ID=cds-PHA55_RS15420;Parent=gene-PHA55_RS15420;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=PHA55_RS15420;product=ISAs1 family transposase;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	3121029	3121283	.	-	.	ID=gene-PHA55_RS15425;Name=PHA55_RS15425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15425;old_locus_tag=PHA55_15420
NZ_CP116044.1	GeneMarkS-2+	CDS	3121029	3121283	.	-	0	ID=cds-WP_227534352.1;Parent=gene-PHA55_RS15425;Dbxref=Genbank:WP_227534352.1;Name=WP_227534352.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA55_RS15425;product=hypothetical protein;protein_id=WP_227534352.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3122279	3123022	.	-	.	ID=gene-PHA55_RS15430;Name=PHA55_RS15430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15430;old_locus_tag=PHA55_15425
NZ_CP116044.1	Protein Homology	CDS	3122279	3123022	.	-	0	ID=cds-WP_072018379.1;Parent=gene-PHA55_RS15430;Dbxref=Genbank:WP_072018379.1;Name=WP_072018379.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025025.2;locus_tag=PHA55_RS15430;product=glycosyltransferase;protein_id=WP_072018379.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3123787	3125193	.	-	.	ID=gene-PHA55_RS15435;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=PHA55_RS15435;old_locus_tag=PHA55_15430
NZ_CP116044.1	Protein Homology	CDS	3123787	3125193	.	-	0	ID=cds-WP_042099305.1;Parent=gene-PHA55_RS15435;Dbxref=Genbank:WP_042099305.1;Name=WP_042099305.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707923.1;locus_tag=PHA55_RS15435;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_042099305.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3125297	3126394	.	-	.	ID=gene-PHA55_RS15440;Name=wzy;gbkey=Gene;gene=wzy;gene_biotype=protein_coding;locus_tag=PHA55_RS15440;old_locus_tag=PHA55_15435
NZ_CP116044.1	Protein Homology	CDS	3125297	3126394	.	-	0	ID=cds-WP_042099307.1;Parent=gene-PHA55_RS15440;Dbxref=Genbank:WP_042099307.1;Name=WP_042099307.1;gbkey=CDS;gene=wzy;inference=COORDINATES: similar to AA sequence:RefSeq:WP_097316995.1;locus_tag=PHA55_RS15440;product=O150 family O-antigen polymerase;protein_id=WP_042099307.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3126412	3127296	.	-	.	ID=gene-PHA55_RS15445;Name=PHA55_RS15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15445;old_locus_tag=PHA55_15440
NZ_CP116044.1	Protein Homology	CDS	3126412	3127296	.	-	0	ID=cds-WP_052318805.1;Parent=gene-PHA55_RS15445;Dbxref=Genbank:WP_052318805.1;Name=WP_052318805.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.2;locus_tag=PHA55_RS15445;product=glycosyltransferase;protein_id=WP_052318805.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3127308	3128222	.	-	.	ID=gene-PHA55_RS15450;Name=PHA55_RS15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15450;old_locus_tag=PHA55_15445
NZ_CP116044.1	Protein Homology	CDS	3127308	3128222	.	-	0	ID=cds-WP_052318804.1;Parent=gene-PHA55_RS15450;Dbxref=Genbank:WP_052318804.1;Name=WP_052318804.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01556.1;locus_tag=PHA55_RS15450;product=glycosyltransferase family 2 protein;protein_id=WP_052318804.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3128209	3129099	.	-	.	ID=gene-PHA55_RS15455;Name=PHA55_RS15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15455;old_locus_tag=PHA55_15450
NZ_CP116044.1	Protein Homology	CDS	3128209	3129099	.	-	0	ID=cds-WP_042099311.1;Parent=gene-PHA55_RS15455;Dbxref=Genbank:WP_042099311.1;Name=WP_042099311.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.2;locus_tag=PHA55_RS15455;product=glycosyltransferase;protein_id=WP_042099311.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3129124	3130269	.	-	.	ID=gene-PHA55_RS15460;Name=PHA55_RS15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15460;old_locus_tag=PHA55_15455
NZ_CP116044.1	Protein Homology	CDS	3129124	3130269	.	-	0	ID=cds-WP_042099312.1;Parent=gene-PHA55_RS15460;Dbxref=Genbank:WP_042099312.1;Name=WP_042099312.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016145.2;locus_tag=PHA55_RS15460;product=polysaccharide pyruvyl transferase family protein;protein_id=WP_042099312.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3130272	3131774	.	-	.	ID=gene-PHA55_RS15465;Name=wzx;gbkey=Gene;gene=wzx;gene_biotype=protein_coding;locus_tag=PHA55_RS15465;old_locus_tag=PHA55_15460
NZ_CP116044.1	Protein Homology	CDS	3130272	3131774	.	-	0	ID=cds-WP_042099313.1;Parent=gene-PHA55_RS15465;Dbxref=Genbank:WP_042099313.1;Name=WP_042099313.1;gbkey=CDS;gene=wzx;inference=COORDINATES: similar to AA sequence:RefSeq:WP_097316998.1;locus_tag=PHA55_RS15465;product=O150 family O-antigen flippase;protein_id=WP_042099313.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3131807	3132790	.	-	.	ID=gene-PHA55_RS15470;Name=PHA55_RS15470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15470;old_locus_tag=PHA55_15465
NZ_CP116044.1	Protein Homology	CDS	3131807	3132790	.	-	0	ID=cds-WP_042099315.1;Parent=gene-PHA55_RS15470;Dbxref=Genbank:WP_042099315.1;Name=WP_042099315.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013077.2;locus_tag=PHA55_RS15470;product=nitroreductase family protein;protein_id=WP_042099315.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3132792	3133343	.	-	.	ID=gene-PHA55_RS15475;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=PHA55_RS15475;old_locus_tag=PHA55_15470
NZ_CP116044.1	Protein Homology	CDS	3132792	3133343	.	-	0	ID=cds-WP_042099316.1;Parent=gene-PHA55_RS15475;Dbxref=Genbank:WP_042099316.1;Name=WP_042099316.1;Ontology_term=GO:0009243,GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001527244.1;locus_tag=PHA55_RS15475;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_042099316.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3133348	3134226	.	-	.	ID=gene-PHA55_RS15480;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=PHA55_RS15480;old_locus_tag=PHA55_15475
NZ_CP116044.1	Protein Homology	CDS	3133348	3134226	.	-	0	ID=cds-WP_042099317.1;Parent=gene-PHA55_RS15480;Dbxref=Genbank:WP_042099317.1;Name=WP_042099317.1;Ontology_term=GO:0045226,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=extracellular polysaccharide biosynthetic process|0045226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707934.1;locus_tag=PHA55_RS15480;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_042099317.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3134284	3135183	.	-	.	ID=gene-PHA55_RS15485;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=PHA55_RS15485;old_locus_tag=PHA55_15480
NZ_CP116044.1	Protein Homology	CDS	3134284	3135183	.	-	0	ID=cds-WP_042099318.1;Parent=gene-PHA55_RS15485;Dbxref=Genbank:WP_042099318.1;Name=WP_042099318.1;gbkey=CDS;gene=rfbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707935.1;locus_tag=PHA55_RS15485;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_042099318.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3135183	3136268	.	-	.	ID=gene-PHA55_RS15490;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=PHA55_RS15490;old_locus_tag=PHA55_15485
NZ_CP116044.1	Protein Homology	CDS	3135183	3136268	.	-	0	ID=cds-WP_042099319.1;Parent=gene-PHA55_RS15490;Dbxref=Genbank:WP_042099319.1;Name=WP_042099319.1;Ontology_term=GO:0009243,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416545.1;locus_tag=PHA55_RS15490;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_042099319.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3136641	3137534	.	-	.	ID=gene-PHA55_RS15495;Name=galF;gbkey=Gene;gene=galF;gene_biotype=protein_coding;locus_tag=PHA55_RS15495;old_locus_tag=PHA55_15490
NZ_CP116044.1	Protein Homology	CDS	3136641	3137534	.	-	0	ID=cds-WP_000183032.1;Parent=gene-PHA55_RS15495;Dbxref=Genbank:WP_000183032.1;Name=WP_000183032.1;gbkey=CDS;gene=galF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310873.1;locus_tag=PHA55_RS15495;product=UTP--glucose-1-phosphate uridylyltransferase GalF;protein_id=WP_000183032.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3137709	3139103	.	-	.	ID=gene-PHA55_RS15500;Name=wcaM;gbkey=Gene;gene=wcaM;gene_biotype=protein_coding;locus_tag=PHA55_RS15500;old_locus_tag=PHA55_15495
NZ_CP116044.1	Protein Homology	CDS	3137709	3139103	.	-	0	ID=cds-WP_042099321.1;Parent=gene-PHA55_RS15500;Dbxref=Genbank:WP_042099321.1;Name=WP_042099321.1;gbkey=CDS;gene=wcaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416547.1;locus_tag=PHA55_RS15500;product=colanic acid biosynthesis protein WcaM;protein_id=WP_042099321.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3139114	3140334	.	-	.	ID=gene-PHA55_RS15505;Name=wcaL;gbkey=Gene;gene=wcaL;gene_biotype=protein_coding;locus_tag=PHA55_RS15505;old_locus_tag=PHA55_15500
NZ_CP116044.1	Protein Homology	CDS	3139114	3140334	.	-	0	ID=cds-WP_042099322.1;Parent=gene-PHA55_RS15505;Dbxref=Genbank:WP_042099322.1;Name=WP_042099322.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaL;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416548.1;locus_tag=PHA55_RS15505;product=colanic acid biosynthesis glycosyltransferase WcaL;protein_id=WP_042099322.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3140331	3141611	.	-	.	ID=gene-PHA55_RS15510;Name=wcaK;gbkey=Gene;gene=wcaK;gene_biotype=protein_coding;locus_tag=PHA55_RS15510;old_locus_tag=PHA55_15505
NZ_CP116044.1	Protein Homology	CDS	3140331	3141611	.	-	0	ID=cds-WP_042099323.1;Parent=gene-PHA55_RS15510;Dbxref=Genbank:WP_042099323.1;Name=WP_042099323.1;gbkey=CDS;gene=wcaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310877.1;locus_tag=PHA55_RS15510;product=colanic acid biosynthesis pyruvyl transferase WcaK;protein_id=WP_042099323.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3141983	3143461	.	-	.	ID=gene-PHA55_RS15515;Name=wzxC;gbkey=Gene;gene=wzxC;gene_biotype=protein_coding;locus_tag=PHA55_RS15515;old_locus_tag=PHA55_15510
NZ_CP116044.1	Protein Homology	CDS	3141983	3143461	.	-	0	ID=cds-WP_000058427.1;Parent=gene-PHA55_RS15515;Dbxref=Genbank:WP_000058427.1;Name=WP_000058427.1;gbkey=CDS;gene=wzxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310878.1;locus_tag=PHA55_RS15515;product=colanic acid undecaprenyl disphosphate flippase WzxC;protein_id=WP_000058427.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3143463	3144857	.	-	.	ID=gene-PHA55_RS15520;Name=wcaJ;gbkey=Gene;gene=wcaJ;gene_biotype=protein_coding;locus_tag=PHA55_RS15520;old_locus_tag=PHA55_15515
NZ_CP116044.1	Protein Homology	CDS	3143463	3144857	.	-	0	ID=cds-WP_000183130.1;Parent=gene-PHA55_RS15520;Dbxref=Genbank:WP_000183130.1;Name=WP_000183130.1;gbkey=CDS;gene=wcaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310879.1;locus_tag=PHA55_RS15520;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_000183130.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3144912	3146282	.	-	.	ID=gene-PHA55_RS15525;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;gene_synonym=manB;locus_tag=PHA55_RS15525;old_locus_tag=PHA55_15520
NZ_CP116044.1	Protein Homology	CDS	3144912	3146282	.	-	0	ID=cds-WP_001356294.1;Parent=gene-PHA55_RS15525;Dbxref=Genbank:WP_001356294.1;Name=WP_001356294.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416552.1;locus_tag=PHA55_RS15525;product=colanic acid biosynthesis phosphomannomutase CpsG;protein_id=WP_001356294.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3146475	3147911	.	-	.	ID=gene-PHA55_RS15530;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=PHA55_RS15530;old_locus_tag=PHA55_15525
NZ_CP116044.1	Protein Homology	CDS	3146475	3147911	.	-	0	ID=cds-WP_000079285.1;Parent=gene-PHA55_RS15530;Dbxref=Genbank:WP_000079285.1;Name=WP_000079285.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;gene=cpsB;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310881.1;locus_tag=PHA55_RS15530;product=mannose-1-phosphate guanyltransferase;protein_id=WP_000079285.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3147914	3149137	.	-	.	ID=gene-PHA55_RS15535;Name=wcaI;gbkey=Gene;gene=wcaI;gene_biotype=protein_coding;locus_tag=PHA55_RS15535;old_locus_tag=PHA55_15530
NZ_CP116044.1	Protein Homology	CDS	3147914	3149137	.	-	0	ID=cds-WP_000699714.1;Parent=gene-PHA55_RS15535;Dbxref=Genbank:WP_000699714.1;Name=WP_000699714.1;gbkey=CDS;gene=wcaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310882.1;locus_tag=PHA55_RS15535;product=colanic acid biosynthesis fucosyltransferase WcaI;protein_id=WP_000699714.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3149134	3149613	.	-	.	ID=gene-PHA55_RS15540;Name=gmm;gbkey=Gene;gene=gmm;gene_biotype=protein_coding;gene_synonym=nudD,wcaH,yefC;locus_tag=PHA55_RS15540;old_locus_tag=PHA55_15535
NZ_CP116044.1	Protein Homology	CDS	3149134	3149613	.	-	0	ID=cds-WP_001298845.1;Parent=gene-PHA55_RS15540;Dbxref=Genbank:WP_001298845.1;Name=WP_001298845.1;gbkey=CDS;gene=gmm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707946.2;locus_tag=PHA55_RS15540;product=GDP-mannose mannosyl hydrolase;protein_id=WP_001298845.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3149616	3150581	.	-	.	ID=gene-PHA55_RS15545;Name=fcl;gbkey=Gene;gene=fcl;gene_biotype=protein_coding;gene_synonym=wcaG,yefB;locus_tag=PHA55_RS15545;old_locus_tag=PHA55_15540
NZ_CP116044.1	Protein Homology	CDS	3149616	3150581	.	-	0	ID=cds-WP_023486656.1;Parent=gene-PHA55_RS15545;Dbxref=Genbank:WP_023486656.1;Name=WP_023486656.1;gbkey=CDS;gene=fcl;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416556.1;locus_tag=PHA55_RS15545;product=GDP-L-fucose synthase;protein_id=WP_023486656.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3150584	3151705	.	-	.	ID=gene-PHA55_RS15550;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=PHA55_RS15550;old_locus_tag=PHA55_15545
NZ_CP116044.1	Protein Homology	CDS	3150584	3151705	.	-	0	ID=cds-WP_000048190.1;Parent=gene-PHA55_RS15550;Dbxref=Genbank:WP_000048190.1;Name=WP_000048190.1;Ontology_term=GO:0000271,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128297.1;locus_tag=PHA55_RS15550;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_000048190.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3151731	3152279	.	-	.	ID=gene-PHA55_RS15555;Name=wcaF;gbkey=Gene;gene=wcaF;gene_biotype=protein_coding;locus_tag=PHA55_RS15555;old_locus_tag=PHA55_15550
NZ_CP116044.1	Protein Homology	CDS	3151731	3152279	.	-	0	ID=cds-WP_001153547.1;Parent=gene-PHA55_RS15555;Dbxref=Genbank:WP_001153547.1;Name=WP_001153547.1;gbkey=CDS;gene=wcaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416558.1;locus_tag=PHA55_RS15555;product=colanic acid biosynthesis acetyltransferase WcaF;protein_id=WP_001153547.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3152295	3153041	.	-	.	ID=gene-PHA55_RS15560;Name=wcaE;gbkey=Gene;gene=wcaE;gene_biotype=protein_coding;locus_tag=PHA55_RS15560;old_locus_tag=PHA55_15555
NZ_CP116044.1	Protein Homology	CDS	3152295	3153041	.	-	0	ID=cds-WP_000927077.1;Parent=gene-PHA55_RS15560;Dbxref=Genbank:WP_000927077.1;Name=WP_000927077.1;gbkey=CDS;gene=wcaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416559.1;locus_tag=PHA55_RS15560;product=colanic acid biosynthesis glycosyltransferase WcaE;protein_id=WP_000927077.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3153052	3154269	.	-	.	ID=gene-PHA55_RS15565;Name=wcaD;gbkey=Gene;gene=wcaD;gene_biotype=protein_coding;locus_tag=PHA55_RS15565;old_locus_tag=PHA55_15560
NZ_CP116044.1	Protein Homology	CDS	3153052	3154269	.	-	0	ID=cds-WP_000107816.1;Parent=gene-PHA55_RS15565;Dbxref=Genbank:WP_000107816.1;Name=WP_000107816.1;gbkey=CDS;gene=wcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416560.1;locus_tag=PHA55_RS15565;product=colanic acid polymerase WcaD;protein_id=WP_000107816.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3154244	3155461	.	-	.	ID=gene-PHA55_RS15570;Name=wcaC;gbkey=Gene;gene=wcaC;gene_biotype=protein_coding;locus_tag=PHA55_RS15570;old_locus_tag=PHA55_15565
NZ_CP116044.1	Protein Homology	CDS	3154244	3155461	.	-	0	ID=cds-WP_001023947.1;Parent=gene-PHA55_RS15570;Dbxref=Genbank:WP_001023947.1;Name=WP_001023947.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaC;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310889.1;locus_tag=PHA55_RS15570;product=colanic acid biosynthesis glycosyltransferase WcaC;protein_id=WP_001023947.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3155458	3155946	.	-	.	ID=gene-PHA55_RS15575;Name=wcaB;gbkey=Gene;gene=wcaB;gene_biotype=protein_coding;locus_tag=PHA55_RS15575;old_locus_tag=PHA55_15570
NZ_CP116044.1	Protein Homology	CDS	3155458	3155946	.	-	0	ID=cds-WP_000888729.1;Parent=gene-PHA55_RS15575;Dbxref=Genbank:WP_000888729.1;Name=WP_000888729.1;gbkey=CDS;gene=wcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310890.1;locus_tag=PHA55_RS15575;product=colanic acid biosynthesis acetyltransferase WcaB;protein_id=WP_000888729.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3155949	3156788	.	-	.	ID=gene-PHA55_RS15580;Name=wcaA;gbkey=Gene;gene=wcaA;gene_biotype=protein_coding;locus_tag=PHA55_RS15580;old_locus_tag=PHA55_15575
NZ_CP116044.1	Protein Homology	CDS	3155949	3156788	.	-	0	ID=cds-WP_000654503.1;Parent=gene-PHA55_RS15580;Dbxref=Genbank:WP_000654503.1;Name=WP_000654503.1;gbkey=CDS;gene=wcaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310891.1;locus_tag=PHA55_RS15580;product=colanic acid biosynthesis glycosyltransferase WcaA;protein_id=WP_000654503.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3156966	3159128	.	-	.	ID=gene-PHA55_RS15585;Name=wzc;gbkey=Gene;gene=wzc;gene_biotype=protein_coding;locus_tag=PHA55_RS15585;old_locus_tag=PHA55_15580
NZ_CP116044.1	Protein Homology	CDS	3156966	3159128	.	-	0	ID=cds-WP_000137112.1;Parent=gene-PHA55_RS15585;Dbxref=Genbank:WP_000137112.1;Name=WP_000137112.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzc;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416564.4;locus_tag=PHA55_RS15585;product=tyrosine-protein kinase Wzc;protein_id=WP_000137112.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3159131	3159574	.	-	.	ID=gene-PHA55_RS15590;Name=wzb;gbkey=Gene;gene=wzb;gene_biotype=protein_coding;locus_tag=PHA55_RS15590;old_locus_tag=PHA55_15585
NZ_CP116044.1	Protein Homology	CDS	3159131	3159574	.	-	0	ID=cds-WP_000482901.1;Parent=gene-PHA55_RS15590;Dbxref=Genbank:WP_000482901.1;Name=WP_000482901.1;gbkey=CDS;gene=wzb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310893.1;locus_tag=PHA55_RS15590;product=low molecular weight protein-tyrosine-phosphatase Wzb;protein_id=WP_000482901.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3159580	3160719	.	-	.	ID=gene-PHA55_RS15595;Name=wza;gbkey=Gene;gene=wza;gene_biotype=protein_coding;locus_tag=PHA55_RS15595;old_locus_tag=PHA55_15590
NZ_CP116044.1	Protein Homology	CDS	3159580	3160719	.	-	0	ID=cds-WP_000978094.1;Parent=gene-PHA55_RS15595;Dbxref=Genbank:WP_000978094.1;Name=WP_000978094.1;gbkey=CDS;gene=wza;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310894.1;locus_tag=PHA55_RS15595;product=polysaccharide export protein Wza;protein_id=WP_000978094.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3161028	3161177	.	+	.	ID=gene-PHA55_RS15600;Name=PHA55_RS15600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15600;old_locus_tag=PHA55_15595
NZ_CP116044.1	Protein Homology	CDS	3161028	3161177	.	+	0	ID=cds-WP_162829205.1;Parent=gene-PHA55_RS15600;Dbxref=Genbank:WP_162829205.1;Name=WP_162829205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458496.1;locus_tag=PHA55_RS15600;product=hypothetical protein;protein_id=WP_162829205.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3161378	3162961	.	+	.	ID=gene-PHA55_RS15605;Name=yegH;gbkey=Gene;gene=yegH;gene_biotype=protein_coding;locus_tag=PHA55_RS15605;old_locus_tag=PHA55_15600
NZ_CP116044.1	Protein Homology	CDS	3161378	3162961	.	+	0	ID=cds-WP_001300971.1;Parent=gene-PHA55_RS15605;Dbxref=Genbank:WP_001300971.1;Name=WP_001300971.1;gbkey=CDS;gene=yegH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310895.2;locus_tag=PHA55_RS15605;product=TerC family protein;protein_id=WP_001300971.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3163235	3165088	.	-	.	ID=gene-PHA55_RS15610;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=PHA55_RS15610;old_locus_tag=PHA55_15605
NZ_CP116044.1	Protein Homology	CDS	3163235	3165088	.	-	0	ID=cds-WP_001252331.1;Parent=gene-PHA55_RS15610;Dbxref=Genbank:WP_001252331.1;Name=WP_001252331.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416568.1;locus_tag=PHA55_RS15610;product=outer membrane assembly protein AsmA;protein_id=WP_001252331.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3165110	3165691	.	-	.	ID=gene-PHA55_RS15615;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=PHA55_RS15615;old_locus_tag=PHA55_15610
NZ_CP116044.1	Protein Homology	CDS	3165110	3165691	.	-	0	ID=cds-WP_001234767.1;Parent=gene-PHA55_RS15615;Dbxref=Genbank:WP_001234767.1;Name=WP_001234767.1;Ontology_term=GO:0009394,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=2'-deoxyribonucleotide metabolic process|0009394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=PHA55_RS15615;product=dCTP deaminase;protein_id=WP_001234767.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3165783	3166424	.	-	.	ID=gene-PHA55_RS15620;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=PHA55_RS15620;old_locus_tag=PHA55_15615
NZ_CP116044.1	Protein Homology	CDS	3165783	3166424	.	-	0	ID=cds-WP_001295424.1;Parent=gene-PHA55_RS15620;Dbxref=Genbank:WP_001295424.1;Name=WP_001295424.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707960.1;locus_tag=PHA55_RS15620;product=uridine kinase;protein_id=WP_001295424.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3166742	3170059	.	+	.	ID=gene-PHA55_RS15625;Name=dgcE;gbkey=Gene;gene=dgcE;gene_biotype=protein_coding;locus_tag=PHA55_RS15625;old_locus_tag=PHA55_15620
NZ_CP116044.1	Protein Homology	CDS	3166742	3170059	.	+	0	ID=cds-WP_047656967.1;Parent=gene-PHA55_RS15625;Dbxref=Genbank:WP_047656967.1;Name=WP_047656967.1;Ontology_term=GO:0005515;gbkey=CDS;gene=dgcE;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416571.1;locus_tag=PHA55_RS15625;product=diguanylate cyclase;protein_id=WP_047656967.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3170098	3170955	.	-	.	ID=gene-PHA55_RS15630;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=PHA55_RS15630;old_locus_tag=PHA55_15625
NZ_CP116044.1	Protein Homology	CDS	3170098	3170955	.	-	0	ID=cds-WP_000288410.1;Parent=gene-PHA55_RS15630;Dbxref=Genbank:WP_000288410.1;Name=WP_000288410.1;Ontology_term=GO:0006281,GO:0003824;gbkey=CDS;gene=alkA;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000288352.1;locus_tag=PHA55_RS15630;product=DNA-3-methyladenine glycosylase 2;protein_id=WP_000288410.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3171089	3172441	.	+	.	ID=gene-PHA55_RS15635;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=PHA55_RS15635;old_locus_tag=PHA55_15630
NZ_CP116044.1	Protein Homology	CDS	3171089	3172441	.	+	0	ID=cds-WP_000469763.1;Parent=gene-PHA55_RS15635;Dbxref=Genbank:WP_000469763.1;Name=WP_000469763.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416573.4;locus_tag=PHA55_RS15635;product=molecular chaperone;protein_id=WP_000469763.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3172453	3174393	.	-	.	ID=gene-PHA55_RS15640;Name=yegI;gbkey=Gene;gene=yegI;gene_biotype=protein_coding;locus_tag=PHA55_RS15640;old_locus_tag=PHA55_15635
NZ_CP116044.1	Protein Homology	CDS	3172453	3174393	.	-	0	ID=cds-WP_001396153.1;Parent=gene-PHA55_RS15640;Dbxref=Genbank:WP_001396153.1;Name=WP_001396153.1;gbkey=CDS;gene=yegI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310906.2;locus_tag=PHA55_RS15640;product=protein kinase YegI;protein_id=WP_001396153.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3174390	3175151	.	-	.	ID=gene-PHA55_RS15645;Name=pphC;gbkey=Gene;gene=pphC;gene_biotype=protein_coding;locus_tag=PHA55_RS15645;old_locus_tag=PHA55_15640
NZ_CP116044.1	Protein Homology	CDS	3174390	3175151	.	-	0	ID=cds-WP_000119072.1;Parent=gene-PHA55_RS15645;Dbxref=Genbank:WP_000119072.1;Name=WP_000119072.1;gbkey=CDS;gene=pphC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707964.1;locus_tag=PHA55_RS15645;product=PP2C family serine/threonine-protein phosphatase;protein_id=WP_000119072.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3175148	3175807	.	-	.	ID=gene-PHA55_RS15650;Name=yegL;gbkey=Gene;gene=yegL;gene_biotype=protein_coding;locus_tag=PHA55_RS15650;old_locus_tag=PHA55_15645
NZ_CP116044.1	Protein Homology	CDS	3175148	3175807	.	-	0	ID=cds-WP_000003178.1;Parent=gene-PHA55_RS15650;Dbxref=Genbank:WP_000003178.1;Name=WP_000003178.1;gbkey=CDS;gene=yegL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416577.1;locus_tag=PHA55_RS15650;product=VWA domain-containing protein;protein_id=WP_000003178.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3176028	3176087	.	-	.	ID=gene-PHA55_RS15655;Name=ibsA;gbkey=Gene;gene=ibsA;gene_biotype=protein_coding;locus_tag=PHA55_RS15655;old_locus_tag=PHA55_15650
NZ_CP116044.1	Protein Homology	CDS	3176028	3176087	.	-	0	ID=cds-WP_010723109.1;Parent=gene-PHA55_RS15655;Dbxref=Genbank:WP_010723109.1;Name=WP_010723109.1;gbkey=CDS;gene=ibsA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791247.1;locus_tag=PHA55_RS15655;product=type I toxin-antitoxin system toxin IbsA;protein_id=WP_010723109.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3176360	3176416	.	-	.	ID=gene-PHA55_RS15660;Name=PHA55_RS15660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15660;old_locus_tag=PHA55_15655
NZ_CP116044.1	Protein Homology	CDS	3176360	3176416	.	-	0	ID=cds-WP_001386899.1;Parent=gene-PHA55_RS15660;Dbxref=Genbank:WP_001386899.1;Name=WP_001386899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791248.1;locus_tag=PHA55_RS15660;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001386899.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3176688	3176744	.	-	.	ID=gene-PHA55_RS15665;Name=PHA55_RS15665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15665;old_locus_tag=PHA55_15660
NZ_CP116044.1	Protein Homology	CDS	3176688	3176744	.	-	0	ID=cds-WP_001386901.1;Parent=gene-PHA55_RS15665;Dbxref=Genbank:WP_001386901.1;Name=WP_001386901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791248.1;locus_tag=PHA55_RS15665;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001386901.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3177023	3178270	.	+	.	ID=gene-PHA55_RS15670;Name=mdtA;gbkey=Gene;gene=mdtA;gene_biotype=protein_coding;locus_tag=PHA55_RS15670;old_locus_tag=PHA55_15665
NZ_CP116044.1	Protein Homology	CDS	3177023	3178270	.	+	0	ID=cds-WP_069924928.1;Parent=gene-PHA55_RS15670;Dbxref=Genbank:WP_069924928.1;Name=WP_069924928.1;gbkey=CDS;gene=mdtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416578.2;locus_tag=PHA55_RS15670;product=multidrug efflux RND transporter subunit MdtA;protein_id=WP_069924928.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3178270	3181392	.	+	.	ID=gene-PHA55_RS15675;Name=mdtB;gbkey=Gene;gene=mdtB;gene_biotype=protein_coding;locus_tag=PHA55_RS15675;old_locus_tag=PHA55_15670
NZ_CP116044.1	Protein Homology	CDS	3178270	3181392	.	+	0	ID=cds-WP_260589828.1;Parent=gene-PHA55_RS15675;Dbxref=Genbank:WP_260589828.1;Name=WP_260589828.1;gbkey=CDS;gene=mdtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310910.1;locus_tag=PHA55_RS15675;product=multidrug efflux RND transporter permease subunit MdtB;protein_id=WP_260589828.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3181393	3184470	.	+	.	ID=gene-PHA55_RS15680;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=PHA55_RS15680;old_locus_tag=PHA55_15675
NZ_CP116044.1	Protein Homology	CDS	3181393	3184470	.	+	0	ID=cds-WP_000667537.1;Parent=gene-PHA55_RS15680;Dbxref=Genbank:WP_000667537.1;Name=WP_000667537.1;gbkey=CDS;gene=mdtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310911.1;locus_tag=PHA55_RS15680;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WP_000667537.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3184471	3185886	.	+	.	ID=gene-PHA55_RS15685;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=PHA55_RS15685;old_locus_tag=PHA55_15680
NZ_CP116044.1	Protein Homology	CDS	3184471	3185886	.	+	0	ID=cds-WP_000130895.1;Parent=gene-PHA55_RS15685;Dbxref=Genbank:WP_000130895.1;Name=WP_000130895.1;gbkey=CDS;gene=mdtD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416581.1;locus_tag=PHA55_RS15685;product=MFS transporter;protein_id=WP_000130895.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3185883	3187286	.	+	.	ID=gene-PHA55_RS15690;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=PHA55_RS15690;old_locus_tag=PHA55_15685
NZ_CP116044.1	Protein Homology	CDS	3185883	3187286	.	+	0	ID=cds-WP_000675150.1;Parent=gene-PHA55_RS15690;Dbxref=Genbank:WP_000675150.1;Name=WP_000675150.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416582.1;locus_tag=PHA55_RS15690;product=two-component system sensor histidine kinase BaeS;protein_id=WP_000675150.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3187283	3188005	.	+	.	ID=gene-PHA55_RS15695;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=PHA55_RS15695;old_locus_tag=PHA55_15690
NZ_CP116044.1	Protein Homology	CDS	3187283	3188005	.	+	0	ID=cds-WP_000137869.1;Parent=gene-PHA55_RS15695;Dbxref=Genbank:WP_000137869.1;Name=WP_000137869.1;Ontology_term=GO:0000160,GO:0003677;gbkey=CDS;gene=baeR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416583.1;locus_tag=PHA55_RS15695;product=two-component system response regulator BaeR;protein_id=WP_000137869.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3188196	3188528	.	+	.	ID=gene-PHA55_RS15700;Name=yegP;gbkey=Gene;gene=yegP;gene_biotype=protein_coding;locus_tag=PHA55_RS15700;old_locus_tag=PHA55_15695
NZ_CP116044.1	Protein Homology	CDS	3188196	3188528	.	+	0	ID=cds-WP_000929408.1;Parent=gene-PHA55_RS15700;Dbxref=Genbank:WP_000929408.1;Name=WP_000929408.1;gbkey=CDS;gene=yegP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310915.2;locus_tag=PHA55_RS15700;product=YegP family protein;protein_id=WP_000929408.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3188737	3189033	.	+	.	ID=gene-PHA55_RS15705;Name=PHA55_RS15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15705;old_locus_tag=PHA55_15700
NZ_CP116044.1	Protein Homology	CDS	3188737	3189033	.	+	0	ID=cds-WP_001307279.1;Parent=gene-PHA55_RS15705;Dbxref=Genbank:WP_001307279.1;Name=WP_001307279.1;Ontology_term=GO:0051983;gbkey=CDS;go_process=regulation of chromosome segregation|0051983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001307279.1;locus_tag=PHA55_RS15705;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=WP_001307279.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3189035	3189331	.	+	.	ID=gene-PHA55_RS15710;Name=PHA55_RS15710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15710;old_locus_tag=PHA55_15705
NZ_CP116044.1	Protein Homology	CDS	3189035	3189331	.	+	0	ID=cds-WP_001220181.1;Parent=gene-PHA55_RS15710;Dbxref=Genbank:WP_001220181.1;Name=WP_001220181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001220181.1;locus_tag=PHA55_RS15710;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_001220181.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3189434	3190795	.	+	.	ID=gene-PHA55_RS15715;Name=yegQ;gbkey=Gene;gene=yegQ;gene_biotype=protein_coding;locus_tag=PHA55_RS15715;old_locus_tag=PHA55_15710
NZ_CP116044.1	Protein Homology	CDS	3189434	3190795	.	+	0	ID=cds-WP_000476011.1;Parent=gene-PHA55_RS15715;Dbxref=Genbank:WP_000476011.1;Name=WP_000476011.1;gbkey=CDS;gene=yegQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416585.1;locus_tag=PHA55_RS15715;product=tRNA 5-hydroxyuridine modification protein YegQ;protein_id=WP_000476011.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3191125	3191442	.	-	.	ID=gene-PHA55_RS15720;Name=yegR;gbkey=Gene;gene=yegR;gene_biotype=protein_coding;locus_tag=PHA55_RS15720;old_locus_tag=PHA55_15715
NZ_CP116044.1	Protein Homology	CDS	3191125	3191442	.	-	0	ID=cds-WP_000716757.1;Parent=gene-PHA55_RS15720;Dbxref=Genbank:WP_000716757.1;Name=WP_000716757.1;gbkey=CDS;gene=yegR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310918.2;locus_tag=PHA55_RS15720;product=protein YegR;protein_id=WP_000716757.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3191857	3192756	.	+	.	ID=gene-PHA55_RS15725;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=PHA55_RS15725;old_locus_tag=PHA55_15720
NZ_CP116044.1	Protein Homology	CDS	3191857	3192756	.	+	0	ID=cds-WP_000807362.1;Parent=gene-PHA55_RS15725;Dbxref=Genbank:WP_000807362.1;Name=WP_000807362.1;Ontology_term=GO:0001727,GO:0046872;gbkey=CDS;gene=yegS;go_function=lipid kinase activity|0001727||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310919.1;locus_tag=PHA55_RS15725;product=lipid kinase YegS;protein_id=WP_000807362.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3192838	3193611	.	-	.	ID=gene-PHA55_RS15730;Name=PHA55_RS15730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15730;old_locus_tag=PHA55_15725
NZ_CP116044.1	Protein Homology	CDS	3192838	3193611	.	-	0	ID=cds-WP_001367074.1;Parent=gene-PHA55_RS15730;Dbxref=Genbank:WP_001367074.1;Name=WP_001367074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020077849.1;locus_tag=PHA55_RS15730;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001367074.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3193717	3194757	.	-	.	ID=gene-PHA55_RS15735;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=PHA55_RS15735;old_locus_tag=PHA55_15730
NZ_CP116044.1	Protein Homology	CDS	3193717	3194757	.	-	0	ID=cds-WP_000844264.1;Parent=gene-PHA55_RS15735;Dbxref=Genbank:WP_000844264.1;Name=WP_000844264.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;gene=gatD;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707977.1;locus_tag=PHA55_RS15735;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=WP_000844264.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3194805	3196160	.	-	.	ID=gene-PHA55_RS15740;Name=PHA55_RS15740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15740;old_locus_tag=PHA55_15735
NZ_CP116044.1	Protein Homology	CDS	3194805	3196160	.	-	0	ID=cds-WP_000490693.1;Parent=gene-PHA55_RS15740;Dbxref=Genbank:WP_000490693.1;Name=WP_000490693.1;Ontology_term=GO:0009401,GO:0015796,GO:0015577,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=galactitol transmembrane transporter activity|0015577||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,galactitol transmembrane transport|0015796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310922.1;locus_tag=PHA55_RS15740;product=galactitol-specific PTS transporter subunit IIC;protein_id=WP_000490693.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3196164	3196448	.	-	.	ID=gene-PHA55_RS15745;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=PHA55_RS15745;old_locus_tag=PHA55_15740
NZ_CP116044.1	Protein Homology	CDS	3196164	3196448	.	-	0	ID=cds-WP_000823287.1;Parent=gene-PHA55_RS15745;Dbxref=Genbank:WP_000823287.1;Name=WP_000823287.1;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310923.1;locus_tag=PHA55_RS15745;product=PTS galactitol transporter subunit IIB;protein_id=WP_000823287.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3196479	3196931	.	-	.	ID=gene-PHA55_RS15750;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=PHA55_RS15750;old_locus_tag=PHA55_15745
NZ_CP116044.1	Protein Homology	CDS	3196479	3196931	.	-	0	ID=cds-WP_000182903.1;Parent=gene-PHA55_RS15750;Dbxref=Genbank:WP_000182903.1;Name=WP_000182903.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310924.1;locus_tag=PHA55_RS15750;product=PTS galactitol transporter subunit IIA;protein_id=WP_000182903.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3196941	3198203	.	-	.	ID=gene-PHA55_RS15755;Name=gatZ;gbkey=Gene;gene=gatZ;gene_biotype=protein_coding;locus_tag=PHA55_RS15755;old_locus_tag=PHA55_15750
NZ_CP116044.1	Protein Homology	CDS	3196941	3198203	.	-	0	ID=cds-WP_000853886.1;Parent=gene-PHA55_RS15755;Dbxref=Genbank:WP_000853886.1;Name=WP_000853886.1;gbkey=CDS;gene=gatZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416598.1;locus_tag=PHA55_RS15755;product=tagatose-bisphosphate aldolase subunit GatZ;protein_id=WP_000853886.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3198232	3199086	.	-	.	ID=gene-PHA55_RS15760;Name=gatY;gbkey=Gene;gene=gatY;gene_biotype=protein_coding;locus_tag=PHA55_RS15760;old_locus_tag=PHA55_15755
NZ_CP116044.1	Protein Homology	CDS	3198232	3199086	.	-	0	ID=cds-WP_001307281.1;Parent=gene-PHA55_RS15760;Dbxref=Genbank:WP_001307281.1;Name=WP_001307281.1;gbkey=CDS;gene=gatY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416599.2;locus_tag=PHA55_RS15760;product=tagatose-bisphosphate aldolase subunit GatY;protein_id=WP_001307281.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3199394	3200446	.	-	.	ID=gene-PHA55_RS15765;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=PHA55_RS15765;old_locus_tag=PHA55_15760
NZ_CP116044.1	Protein Homology	CDS	3199394	3200446	.	-	0	ID=cds-WP_000129551.1;Parent=gene-PHA55_RS15765;Dbxref=Genbank:WP_000129551.1;Name=WP_000129551.1;Ontology_term=GO:0004332;gbkey=CDS;gene=fbaB;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=PHA55_RS15765;product=class I fructose-bisphosphate aldolase;protein_id=WP_000129551.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3200703	3201980	.	+	.	ID=gene-PHA55_RS15770;Name=yegT;gbkey=Gene;gene=yegT;gene_biotype=protein_coding;locus_tag=PHA55_RS15770;old_locus_tag=PHA55_15765
NZ_CP116044.1	Protein Homology	CDS	3200703	3201980	.	+	0	ID=cds-WP_000858498.1;Parent=gene-PHA55_RS15770;Dbxref=Genbank:WP_000858498.1;Name=WP_000858498.1;Ontology_term=GO:0015858,GO:0005337,GO:0016020;gbkey=CDS;gene=yegT;go_component=membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416601.1;locus_tag=PHA55_RS15770;product=nucleoside permease;protein_id=WP_000858498.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3201977	3202981	.	+	.	ID=gene-PHA55_RS15775;Name=yegU;gbkey=Gene;gene=yegU;gene_biotype=protein_coding;locus_tag=PHA55_RS15775;old_locus_tag=PHA55_15770
NZ_CP116044.1	Protein Homology	CDS	3201977	3202981	.	+	0	ID=cds-WP_000846217.1;Parent=gene-PHA55_RS15775;Dbxref=Genbank:WP_000846217.1;Name=WP_000846217.1;gbkey=CDS;gene=yegU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416602.1;locus_tag=PHA55_RS15775;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_000846217.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3202978	3203943	.	+	.	ID=gene-PHA55_RS15780;Name=yegV;gbkey=Gene;gene=yegV;gene_biotype=protein_coding;locus_tag=PHA55_RS15780;old_locus_tag=PHA55_15775
NZ_CP116044.1	Protein Homology	CDS	3202978	3203943	.	+	0	ID=cds-WP_000011957.1;Parent=gene-PHA55_RS15780;Dbxref=Genbank:WP_000011957.1;Name=WP_000011957.1;gbkey=CDS;gene=yegV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416603.1;locus_tag=PHA55_RS15780;product=carbohydrate kinase family protein;protein_id=WP_000011957.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3203917	3204663	.	-	.	ID=gene-PHA55_RS15785;Name=yegW;gbkey=Gene;gene=yegW;gene_biotype=protein_coding;locus_tag=PHA55_RS15785;old_locus_tag=PHA55_15780
NZ_CP116044.1	Protein Homology	CDS	3203917	3204663	.	-	0	ID=cds-WP_000434038.1;Parent=gene-PHA55_RS15785;Dbxref=Genbank:WP_000434038.1;Name=WP_000434038.1;gbkey=CDS;gene=yegW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310931.1;locus_tag=PHA55_RS15785;product=GntR family transcriptional regulator;protein_id=WP_000434038.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3204715	3205533	.	-	.	ID=gene-PHA55_RS15790;Name=yegX;gbkey=Gene;gene=yegX;gene_biotype=protein_coding;locus_tag=PHA55_RS15790;old_locus_tag=PHA55_15785
NZ_CP116044.1	Protein Homology	CDS	3204715	3205533	.	-	0	ID=cds-WP_001307284.1;Parent=gene-PHA55_RS15790;Dbxref=Genbank:WP_001307284.1;Name=WP_001307284.1;gbkey=CDS;gene=yegX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416605.2;locus_tag=PHA55_RS15790;product=glycoside hydrolase family 25 protein;protein_id=WP_001307284.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3205598	3206398	.	-	.	ID=gene-PHA55_RS15795;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=PHA55_RS15795;old_locus_tag=PHA55_15790
NZ_CP116044.1	Protein Homology	CDS	3205598	3206398	.	-	0	ID=cds-WP_000822275.1;Parent=gene-PHA55_RS15795;Dbxref=Genbank:WP_000822275.1;Name=WP_000822275.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416606.1;locus_tag=PHA55_RS15795;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_000822275.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3206395	3207183	.	-	.	ID=gene-PHA55_RS15800;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=PHA55_RS15800;old_locus_tag=PHA55_15795
NZ_CP116044.1	Protein Homology	CDS	3206395	3207183	.	-	0	ID=cds-WP_001195602.1;Parent=gene-PHA55_RS15800;Dbxref=Genbank:WP_001195602.1;Name=WP_001195602.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310934.1;locus_tag=PHA55_RS15800;product=hydroxyethylthiazole kinase;protein_id=WP_001195602.1;transl_table=11
NZ_CP116044.1	cmsearch	riboswitch	3207218	3207314	.	-	.	ID=id-NZ_CP116044.1:3207218..3207314;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
NZ_CP116044.1	RefSeq	gene	3207406	3207678	.	-	.	ID=gene-PHA55_RS15805;Name=rcnR;gbkey=Gene;gene=rcnR;gene_biotype=protein_coding;locus_tag=PHA55_RS15805;old_locus_tag=PHA55_15800
NZ_CP116044.1	Protein Homology	CDS	3207406	3207678	.	-	0	ID=cds-WP_000019944.1;Parent=gene-PHA55_RS15805;Dbxref=Genbank:WP_000019944.1;Name=WP_000019944.1;gbkey=CDS;gene=rcnR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310938.1;locus_tag=PHA55_RS15805;product=Ni(II)/Co(II)-binding transcriptional repressor RcnR;protein_id=WP_000019944.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3207799	3208623	.	+	.	ID=gene-PHA55_RS15810;Name=rcnA;gbkey=Gene;gene=rcnA;gene_biotype=protein_coding;locus_tag=PHA55_RS15810;old_locus_tag=PHA55_15805
NZ_CP116044.1	Protein Homology	CDS	3207799	3208623	.	+	0	ID=cds-WP_000134647.1;Parent=gene-PHA55_RS15810;Dbxref=Genbank:WP_000134647.1;Name=WP_000134647.1;gbkey=CDS;gene=rcnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416609.1;locus_tag=PHA55_RS15810;product=nickel/cobalt efflux protein RcnA;protein_id=WP_000134647.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3208842	3209180	.	+	.	ID=gene-PHA55_RS15815;Name=rcnB;gbkey=Gene;gene=rcnB;gene_biotype=protein_coding;locus_tag=PHA55_RS15815;old_locus_tag=PHA55_15810
NZ_CP116044.1	Protein Homology	CDS	3208842	3209180	.	+	0	ID=cds-WP_000153067.1;Parent=gene-PHA55_RS15815;Dbxref=Genbank:WP_000153067.1;Name=WP_000153067.1;gbkey=CDS;gene=rcnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416610.4;locus_tag=PHA55_RS15815;product=Ni(II)/Co(II) efflux transporter accessory subunit RcnB;protein_id=WP_000153067.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3209262	3210296	.	-	.	ID=gene-PHA55_RS15820;Name=yehA;gbkey=Gene;gene=yehA;gene_biotype=protein_coding;locus_tag=PHA55_RS15820;old_locus_tag=PHA55_15815
NZ_CP116044.1	Protein Homology	CDS	3209262	3210296	.	-	0	ID=cds-WP_001676626.1;Parent=gene-PHA55_RS15820;Dbxref=Genbank:WP_001676626.1;Name=WP_001676626.1;gbkey=CDS;gene=yehA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416611.1;locus_tag=PHA55_RS15820;product=putative fimbrial-like adhesin protein;protein_id=WP_001676626.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3210310	3212790	.	-	.	ID=gene-PHA55_RS15825;Name=yehB;gbkey=Gene;gene=yehB;gene_biotype=protein_coding;locus_tag=PHA55_RS15825;old_locus_tag=PHA55_15820
NZ_CP116044.1	Protein Homology	CDS	3210310	3212790	.	-	0	ID=cds-WP_001676627.1;Parent=gene-PHA55_RS15825;Dbxref=Genbank:WP_001676627.1;Name=WP_001676627.1;gbkey=CDS;gene=yehB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707994.2;locus_tag=PHA55_RS15825;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_001676627.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3212806	3213480	.	-	.	ID=gene-PHA55_RS15830;Name=yehC;gbkey=Gene;gene=yehC;gene_biotype=protein_coding;locus_tag=PHA55_RS15830;old_locus_tag=PHA55_15825
NZ_CP116044.1	Protein Homology	CDS	3212806	3213480	.	-	0	ID=cds-WP_000677395.1;Parent=gene-PHA55_RS15830;Dbxref=Genbank:WP_000677395.1;Name=WP_000677395.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;gene=yehC;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310943.1;locus_tag=PHA55_RS15830;product=fimbria/pilus periplasmic chaperone;protein_id=WP_000677395.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3213560	3214102	.	-	.	ID=gene-PHA55_RS15835;Name=yehD;gbkey=Gene;gene=yehD;gene_biotype=protein_coding;locus_tag=PHA55_RS15835;old_locus_tag=PHA55_15830
NZ_CP116044.1	Protein Homology	CDS	3213560	3214102	.	-	0	ID=cds-WP_000830468.1;Parent=gene-PHA55_RS15835;Dbxref=Genbank:WP_000830468.1;Name=WP_000830468.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yehD;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707997.1;locus_tag=PHA55_RS15835;product=fimbrial protein;protein_id=WP_000830468.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3214395	3214676	.	-	.	ID=gene-PHA55_RS15840;Name=yehE;gbkey=Gene;gene=yehE;gene_biotype=protein_coding;locus_tag=PHA55_RS15840;old_locus_tag=PHA55_15835
NZ_CP116044.1	Protein Homology	CDS	3214395	3214676	.	-	0	ID=cds-WP_032163827.1;Parent=gene-PHA55_RS15840;Dbxref=Genbank:WP_032163827.1;Name=WP_032163827.1;gbkey=CDS;gene=yehE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439264.1;locus_tag=PHA55_RS15840;product=YehE family protein;protein_id=WP_032163827.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3214939	3216048	.	-	.	ID=gene-PHA55_RS15845;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=PHA55_RS15845;old_locus_tag=PHA55_15840
NZ_CP116044.1	Protein Homology	CDS	3214939	3216048	.	-	0	ID=cds-WP_001005448.1;Parent=gene-PHA55_RS15845;Dbxref=Genbank:WP_001005448.1;Name=WP_001005448.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310946.2;locus_tag=PHA55_RS15845;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_001005448.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3216180	3218213	.	+	.	ID=gene-PHA55_RS15850;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=PHA55_RS15850;old_locus_tag=PHA55_15845
NZ_CP116044.1	Protein Homology	CDS	3216180	3218213	.	+	0	ID=cds-WP_001439138.1;Parent=gene-PHA55_RS15850;Dbxref=Genbank:WP_001439138.1;Name=WP_001439138.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310947.1;locus_tag=PHA55_RS15850;product=methionine--tRNA ligase;protein_id=WP_001439138.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3218354	3222148	.	+	.	ID=gene-PHA55_RS15855;Name=PHA55_RS15855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15855;old_locus_tag=PHA55_15850
NZ_CP116044.1	Protein Homology	CDS	3218354	3222148	.	+	0	ID=cds-WP_047674029.1;Parent=gene-PHA55_RS15855;Dbxref=Genbank:WP_047674029.1;Name=WP_047674029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001215568.1;locus_tag=PHA55_RS15855;product=WGR and DUF4132 domain-containing protein;protein_id=WP_047674029.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	3222158	3225789	.	+	.	ID=gene-PHA55_RS15860;Name=yehI;gbkey=Gene;gene=yehI;gene_biotype=pseudogene;locus_tag=PHA55_RS15860;old_locus_tag=PHA55_15855;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	3222158	3225789	.	+	0	ID=cds-PHA55_RS15860;Parent=gene-PHA55_RS15860;Note=frameshifted;gbkey=CDS;gene=yehI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416621.1;locus_tag=PHA55_RS15860;product=DUF4132 domain-containing protein YehI;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	3225850	3226203	.	+	.	ID=gene-PHA55_RS15865;Name=PHA55_RS15865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS15865;old_locus_tag=PHA55_15860
NZ_CP116044.1	Protein Homology	CDS	3225850	3226203	.	+	0	ID=cds-WP_000636940.1;Parent=gene-PHA55_RS15865;Dbxref=Genbank:WP_000636940.1;Name=WP_000636940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000636928.1;locus_tag=PHA55_RS15865;product=hypothetical protein;protein_id=WP_000636940.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3227353	3228441	.	+	.	ID=gene-PHA55_RS15870;Name=yehL;gbkey=Gene;gene=yehL;gene_biotype=protein_coding;locus_tag=PHA55_RS15870;old_locus_tag=PHA55_15865
NZ_CP116044.1	Protein Homology	CDS	3227353	3228441	.	+	0	ID=cds-WP_000074859.1;Parent=gene-PHA55_RS15870;Dbxref=Genbank:WP_000074859.1;Name=WP_000074859.1;gbkey=CDS;gene=yehL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310954.2;locus_tag=PHA55_RS15870;product=MoxR family ATPase;protein_id=WP_000074859.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3228452	3230731	.	+	.	ID=gene-PHA55_RS15875;Name=yehM;gbkey=Gene;gene=yehM;gene_biotype=protein_coding;locus_tag=PHA55_RS15875;old_locus_tag=PHA55_15870
NZ_CP116044.1	Protein Homology	CDS	3228452	3230731	.	+	0	ID=cds-WP_001543026.1;Parent=gene-PHA55_RS15875;Dbxref=Genbank:WP_001543026.1;Name=WP_001543026.1;gbkey=CDS;gene=yehM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416624.1;locus_tag=PHA55_RS15875;product=DUF5682 family protein;protein_id=WP_001543026.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3230724	3231860	.	+	.	ID=gene-PHA55_RS15880;Name=yehP;gbkey=Gene;gene=yehP;gene_biotype=protein_coding;locus_tag=PHA55_RS15880;old_locus_tag=PHA55_15875
NZ_CP116044.1	Protein Homology	CDS	3230724	3231860	.	+	0	ID=cds-WP_001292767.1;Parent=gene-PHA55_RS15880;Dbxref=Genbank:WP_001292767.1;Name=WP_001292767.1;gbkey=CDS;gene=yehP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416625.1;locus_tag=PHA55_RS15880;product=VWA domain-containing protein;protein_id=WP_001292767.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3231857	3233857	.	+	.	ID=gene-PHA55_RS15885;Name=yehQ;gbkey=Gene;gene=yehQ;gene_biotype=protein_coding;locus_tag=PHA55_RS15885;old_locus_tag=PHA55_15880
NZ_CP116044.1	Protein Homology	CDS	3231857	3233857	.	+	0	ID=cds-WP_001371026.1;Parent=gene-PHA55_RS15885;Dbxref=Genbank:WP_001371026.1;Name=WP_001371026.1;Ontology_term=GO:0008270;gbkey=CDS;gene=yehQ;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708010.2;locus_tag=PHA55_RS15885;product=SWIM zinc finger family protein;protein_id=WP_001371026.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3233982	3234443	.	+	.	ID=gene-PHA55_RS15890;Name=yehR;gbkey=Gene;gene=yehR;gene_biotype=protein_coding;locus_tag=PHA55_RS15890;old_locus_tag=PHA55_15885
NZ_CP116044.1	Protein Homology	CDS	3233982	3234443	.	+	0	ID=cds-WP_001295429.1;Parent=gene-PHA55_RS15890;Dbxref=Genbank:WP_001295429.1;Name=WP_001295429.1;gbkey=CDS;gene=yehR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416627.2;locus_tag=PHA55_RS15890;product=YehR family lipoprotein;protein_id=WP_001295429.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3234484	3234954	.	-	.	ID=gene-PHA55_RS15895;Name=yehS;gbkey=Gene;gene=yehS;gene_biotype=protein_coding;locus_tag=PHA55_RS15895;old_locus_tag=PHA55_15890
NZ_CP116044.1	Protein Homology	CDS	3234484	3234954	.	-	0	ID=cds-WP_001295430.1;Parent=gene-PHA55_RS15895;Dbxref=Genbank:WP_001295430.1;Name=WP_001295430.1;gbkey=CDS;gene=yehS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310962.1;locus_tag=PHA55_RS15895;product=DUF1456 family protein;protein_id=WP_001295430.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3235001	3235720	.	-	.	ID=gene-PHA55_RS15900;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=PHA55_RS15900;old_locus_tag=PHA55_15895
NZ_CP116044.1	Protein Homology	CDS	3235001	3235720	.	-	0	ID=cds-WP_000598641.1;Parent=gene-PHA55_RS15900;Dbxref=Genbank:WP_000598641.1;Name=WP_000598641.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310963.2;locus_tag=PHA55_RS15900;product=two-component system response regulator BtsR;protein_id=WP_000598641.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3235717	3237402	.	-	.	ID=gene-PHA55_RS15905;Name=btsS;gbkey=Gene;gene=btsS;gene_biotype=protein_coding;locus_tag=PHA55_RS15905;old_locus_tag=PHA55_15900
NZ_CP116044.1	Protein Homology	CDS	3235717	3237402	.	-	0	ID=cds-WP_001295431.1;Parent=gene-PHA55_RS15905;Dbxref=Genbank:WP_001295431.1;Name=WP_001295431.1;gbkey=CDS;gene=btsS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416630.1;locus_tag=PHA55_RS15905;product=two-component regulatory system sensor histidine kinase BtsS;protein_id=WP_001295431.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3237624	3238355	.	+	.	ID=gene-PHA55_RS15910;Name=mlrA;gbkey=Gene;gene=mlrA;gene_biotype=protein_coding;locus_tag=PHA55_RS15910;old_locus_tag=PHA55_15905
NZ_CP116044.1	Protein Homology	CDS	3237624	3238355	.	+	0	ID=cds-WP_001240401.1;Parent=gene-PHA55_RS15910;Dbxref=Genbank:WP_001240401.1;Name=WP_001240401.1;gbkey=CDS;gene=mlrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416631.1;locus_tag=PHA55_RS15910;product=HTH-type transcriptional regulator MlrA;protein_id=WP_001240401.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3238415	3238522	.	+	.	ID=gene-PHA55_RS15915;Name=yohO;gbkey=Gene;gene=yohO;gene_biotype=protein_coding;locus_tag=PHA55_RS15915;old_locus_tag=PHA55_15910
NZ_CP116044.1	Protein Homology	CDS	3238415	3238522	.	+	0	ID=cds-WP_001216963.1;Parent=gene-PHA55_RS15915;Dbxref=Genbank:WP_001216963.1;Name=WP_001216963.1;gbkey=CDS;gene=yohO;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588460.1;locus_tag=PHA55_RS15915;product=protein YohO;protein_id=WP_001216963.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3238503	3239234	.	-	.	ID=gene-PHA55_RS15920;Name=yehW;gbkey=Gene;gene=yehW;gene_biotype=protein_coding;locus_tag=PHA55_RS15920;old_locus_tag=PHA55_15915
NZ_CP116044.1	Protein Homology	CDS	3238503	3239234	.	-	0	ID=cds-WP_000783120.1;Parent=gene-PHA55_RS15920;Dbxref=Genbank:WP_000783120.1;Name=WP_000783120.1;gbkey=CDS;gene=yehW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311042.1;locus_tag=PHA55_RS15920;product=glycine betaine ABC transporter permease YehW;protein_id=WP_000783120.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3239239	3240165	.	-	.	ID=gene-PHA55_RS15925;Name=yehX;gbkey=Gene;gene=yehX;gene_biotype=protein_coding;locus_tag=PHA55_RS15925;old_locus_tag=PHA55_15920
NZ_CP116044.1	Protein Homology	CDS	3239239	3240165	.	-	0	ID=cds-WP_000569326.1;Parent=gene-PHA55_RS15925;Dbxref=Genbank:WP_000569326.1;Name=WP_000569326.1;gbkey=CDS;gene=yehX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311043.1;locus_tag=PHA55_RS15925;product=glycine betaine ABC transporter ATP binding protein YehX;protein_id=WP_000569326.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3240158	3241315	.	-	.	ID=gene-PHA55_RS15930;Name=yehY;gbkey=Gene;gene=yehY;gene_biotype=protein_coding;locus_tag=PHA55_RS15930;old_locus_tag=PHA55_15925
NZ_CP116044.1	Protein Homology	CDS	3240158	3241315	.	-	0	ID=cds-WP_000221805.1;Parent=gene-PHA55_RS15930;Dbxref=Genbank:WP_000221805.1;Name=WP_000221805.1;gbkey=CDS;gene=yehY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311044.1;locus_tag=PHA55_RS15930;product=glycine betaine ABC transporter permease YehY;protein_id=WP_000221805.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3241322	3242239	.	-	.	ID=gene-PHA55_RS15935;Name=osmF;gbkey=Gene;gene=osmF;gene_biotype=protein_coding;locus_tag=PHA55_RS15935;old_locus_tag=PHA55_15930
NZ_CP116044.1	Protein Homology	CDS	3241322	3242239	.	-	0	ID=cds-WP_001130306.1;Parent=gene-PHA55_RS15935;Dbxref=Genbank:WP_001130306.1;Name=WP_001130306.1;gbkey=CDS;gene=osmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416635.1;locus_tag=PHA55_RS15935;product=glycine betaine ABC transporter substrate-binding protein OsmF;protein_id=WP_001130306.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3242450	3244747	.	-	.	ID=gene-PHA55_RS15940;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=PHA55_RS15940;old_locus_tag=PHA55_15935
NZ_CP116044.1	Protein Homology	CDS	3242450	3244747	.	-	0	ID=cds-WP_000871517.1;Parent=gene-PHA55_RS15940;Dbxref=Genbank:WP_000871517.1;Name=WP_000871517.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bglX;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416636.1;locus_tag=PHA55_RS15940;product=beta-glucosidase BglX;protein_id=WP_000871517.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3244943	3246658	.	+	.	ID=gene-PHA55_RS15945;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=PHA55_RS15945;old_locus_tag=PHA55_15940
NZ_CP116044.1	Protein Homology	CDS	3244943	3246658	.	+	0	ID=cds-WP_000097390.1;Parent=gene-PHA55_RS15945;Dbxref=Genbank:WP_000097390.1;Name=WP_000097390.1;Ontology_term=GO:0006089,GO:0019516,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA,lactate oxidation|0019516||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416637.1;locus_tag=PHA55_RS15945;product=D-lactate dehydrogenase;protein_id=WP_000097390.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3246696	3247628	.	-	.	ID=gene-PHA55_RS15950;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=PHA55_RS15950;old_locus_tag=PHA55_15945
NZ_CP116044.1	Protein Homology	CDS	3246696	3247628	.	-	0	ID=cds-WP_001295432.1;Parent=gene-PHA55_RS15950;Dbxref=Genbank:WP_001295432.1;Name=WP_001295432.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311048.2;locus_tag=PHA55_RS15950;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_001295432.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3247802	3248389	.	-	.	ID=gene-PHA55_RS15955;Name=yohC;gbkey=Gene;gene=yohC;gene_biotype=protein_coding;locus_tag=PHA55_RS15955;old_locus_tag=PHA55_15950
NZ_CP116044.1	Protein Homology	CDS	3247802	3248389	.	-	0	ID=cds-WP_001295454.1;Parent=gene-PHA55_RS15955;Dbxref=Genbank:WP_001295454.1;Name=WP_001295454.1;gbkey=CDS;gene=yohC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170891.1;locus_tag=PHA55_RS15955;product=Yip1 family protein;protein_id=WP_001295454.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3248559	3249137	.	+	.	ID=gene-PHA55_RS15960;Name=yohD;gbkey=Gene;gene=yohD;gene_biotype=protein_coding;locus_tag=PHA55_RS15960;old_locus_tag=PHA55_15955
NZ_CP116044.1	Protein Homology	CDS	3248559	3249137	.	+	0	ID=cds-WP_001296821.1;Parent=gene-PHA55_RS15960;Dbxref=Genbank:WP_001296821.1;Name=WP_001296821.1;gbkey=CDS;gene=yohD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416640.2;locus_tag=PHA55_RS15960;product=DedA family protein;protein_id=WP_001296821.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3249267	3250028	.	-	.	ID=gene-PHA55_RS15965;Name=yohF;gbkey=Gene;gene=yohF;gene_biotype=protein_coding;locus_tag=PHA55_RS15965;old_locus_tag=PHA55_15960
NZ_CP116044.1	Protein Homology	CDS	3249267	3250028	.	-	0	ID=cds-WP_000079526.1;Parent=gene-PHA55_RS15965;Dbxref=Genbank:WP_000079526.1;Name=WP_000079526.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yohF;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311051.1;locus_tag=PHA55_RS15965;product=SDR family oxidoreductase;protein_id=WP_000079526.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3250081	3251517	.	-	.	ID=gene-PHA55_RS15970;Name=mdtQ;gbkey=Gene;gene=mdtQ;gene_biotype=protein_coding;locus_tag=PHA55_RS15970;old_locus_tag=PHA55_15965
NZ_CP116044.1	Protein Homology	CDS	3250081	3251517	.	-	0	ID=cds-WP_001078114.1;Parent=gene-PHA55_RS15970;Dbxref=Genbank:WP_001078114.1;Name=WP_001078114.1;Ontology_term=GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;gene=mdtQ;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001583680.1;locus_tag=PHA55_RS15970;product=multidrug resistance outer membrane protein MdtQ;protein_id=WP_001078114.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3251741	3251824	.	+	.	ID=gene-PHA55_RS15975;Name=yohP;gbkey=Gene;gene=yohP;gene_biotype=protein_coding;locus_tag=PHA55_RS15975;old_locus_tag=PHA55_15970
NZ_CP116044.1	Protein Homology	CDS	3251741	3251824	.	+	0	ID=cds-WP_000691708.1;Parent=gene-PHA55_RS15975;Dbxref=Genbank:WP_000691708.1;Name=WP_000691708.1;gbkey=CDS;gene=yohP;inference=COORDINATES: protein motif:HMM:NF011345.0;locus_tag=PHA55_RS15975;product=protein YohP;protein_id=WP_000691708.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3252212	3253162	.	-	.	ID=gene-PHA55_RS15980;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=PHA55_RS15980;old_locus_tag=PHA55_15975
NZ_CP116044.1	Protein Homology	CDS	3252212	3253162	.	-	0	ID=cds-WP_001264868.1;Parent=gene-PHA55_RS15980;Dbxref=Genbank:WP_001264868.1;Name=WP_001264868.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311053.1;locus_tag=PHA55_RS15980;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WP_001264868.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3253401	3253799	.	+	.	ID=gene-PHA55_RS15985;Name=yohJ;gbkey=Gene;gene=yohJ;gene_biotype=protein_coding;locus_tag=PHA55_RS15985;old_locus_tag=PHA55_15980
NZ_CP116044.1	Protein Homology	CDS	3253401	3253799	.	+	0	ID=cds-WP_001299855.1;Parent=gene-PHA55_RS15985;Dbxref=Genbank:WP_001299855.1;Name=WP_001299855.1;gbkey=CDS;gene=yohJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311060.1;locus_tag=PHA55_RS15985;product=CidA/LrgA family protein;protein_id=WP_001299855.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3253796	3254491	.	+	.	ID=gene-PHA55_RS15990;Name=yohK;gbkey=Gene;gene=yohK;gene_biotype=protein_coding;locus_tag=PHA55_RS15990;old_locus_tag=PHA55_15985
NZ_CP116044.1	Protein Homology	CDS	3253796	3254491	.	+	0	ID=cds-WP_271287463.1;Parent=gene-PHA55_RS15990;Dbxref=Genbank:WP_271287463.1;Name=WP_271287463.1;gbkey=CDS;gene=yohK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416647.1;locus_tag=PHA55_RS15990;product=CidB/LrgB family autolysis modulator;protein_id=WP_271287463.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3254622	3255506	.	+	.	ID=gene-PHA55_RS15995;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=PHA55_RS15995;old_locus_tag=PHA55_15990
NZ_CP116044.1	Protein Homology	CDS	3254622	3255506	.	+	0	ID=cds-WP_000553555.1;Parent=gene-PHA55_RS15995;Dbxref=Genbank:WP_000553555.1;Name=WP_000553555.1;Ontology_term=GO:0009972,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416648.1;locus_tag=PHA55_RS15995;product=cytidine deaminase;protein_id=WP_000553555.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3255656	3256375	.	+	.	ID=gene-PHA55_RS16000;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=PHA55_RS16000;old_locus_tag=PHA55_15995
NZ_CP116044.1	Protein Homology	CDS	3255656	3256375	.	+	0	ID=cds-WP_000920064.1;Parent=gene-PHA55_RS16000;Dbxref=Genbank:WP_000920064.1;Name=WP_000920064.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311063.1;locus_tag=PHA55_RS16000;product=outer membrane permeability protein SanA;protein_id=WP_000920064.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3256378	3256617	.	+	.	ID=gene-PHA55_RS16005;Name=yeiS;gbkey=Gene;gene=yeiS;gene_biotype=protein_coding;locus_tag=PHA55_RS16005;old_locus_tag=PHA55_16000
NZ_CP116044.1	Protein Homology	CDS	3256378	3256617	.	+	0	ID=cds-WP_000383096.1;Parent=gene-PHA55_RS16005;Dbxref=Genbank:WP_000383096.1;Name=WP_000383096.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yeiS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311064.1;locus_tag=PHA55_RS16005;product=DUF2542 family protein;protein_id=WP_000383096.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3256936	3258174	.	+	.	ID=gene-PHA55_RS16010;Name=preT;gbkey=Gene;gene=preT;gene_biotype=protein_coding;locus_tag=PHA55_RS16010;old_locus_tag=PHA55_16005
NZ_CP116044.1	Protein Homology	CDS	3256936	3258174	.	+	0	ID=cds-WP_001136361.1;Parent=gene-PHA55_RS16010;Dbxref=Genbank:WP_001136361.1;Name=WP_001136361.1;gbkey=CDS;gene=preT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416651.1;locus_tag=PHA55_RS16010;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreT;protein_id=WP_001136361.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3258168	3259403	.	+	.	ID=gene-PHA55_RS16015;Name=preA;gbkey=Gene;gene=preA;gene_biotype=protein_coding;locus_tag=PHA55_RS16015;old_locus_tag=PHA55_16010
NZ_CP116044.1	Protein Homology	CDS	3258168	3259403	.	+	0	ID=cds-WP_000956043.1;Parent=gene-PHA55_RS16015;Dbxref=Genbank:WP_000956043.1;Name=WP_000956043.1;Ontology_term=GO:0006210,GO:0006212,GO:0017113;gbkey=CDS;gene=preA;go_function=dihydropyrimidine dehydrogenase (NADP+) activity|0017113||IEA;go_process=thymine catabolic process|0006210||IEA,uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416652.4;locus_tag=PHA55_RS16015;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=WP_000956043.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3259474	3260484	.	-	.	ID=gene-PHA55_RS16020;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=PHA55_RS16020;old_locus_tag=PHA55_16015
NZ_CP116044.1	Protein Homology	CDS	3259474	3260484	.	-	0	ID=cds-WP_001275118.1;Parent=gene-PHA55_RS16020;Dbxref=Genbank:WP_001275118.1;Name=WP_001275118.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mglC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=PHA55_RS16020;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WP_001275118.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3260500	3262020	.	-	.	ID=gene-PHA55_RS16025;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=PHA55_RS16025;old_locus_tag=PHA55_16020
NZ_CP116044.1	Protein Homology	CDS	3260500	3262020	.	-	0	ID=cds-WP_000255039.1;Parent=gene-PHA55_RS16025;Dbxref=Genbank:WP_000255039.1;Name=WP_000255039.1;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883197.1;locus_tag=PHA55_RS16025;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;protein_id=WP_000255039.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3262081	3263079	.	-	.	ID=gene-PHA55_RS16030;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=PHA55_RS16030;old_locus_tag=PHA55_16025
NZ_CP116044.1	Protein Homology	CDS	3262081	3263079	.	-	0	ID=cds-WP_001036964.1;Parent=gene-PHA55_RS16030;Dbxref=Genbank:WP_001036964.1;Name=WP_001036964.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416655.1;locus_tag=PHA55_RS16030;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=WP_001036964.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3263359	3264399	.	-	.	ID=gene-PHA55_RS16035;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=PHA55_RS16035;old_locus_tag=PHA55_16030
NZ_CP116044.1	Protein Homology	CDS	3263359	3264399	.	-	0	ID=cds-WP_271287464.1;Parent=gene-PHA55_RS16035;Dbxref=Genbank:WP_271287464.1;Name=WP_271287464.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708050.2;locus_tag=PHA55_RS16035;product=HTH-type transcriptional regulator GalS;protein_id=WP_271287464.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3264541	3265698	.	-	.	ID=gene-PHA55_RS16040;Name=yeiB;gbkey=Gene;gene=yeiB;gene_biotype=protein_coding;locus_tag=PHA55_RS16040;old_locus_tag=PHA55_16035
NZ_CP116044.1	Protein Homology	CDS	3264541	3265698	.	-	0	ID=cds-WP_000440895.1;Parent=gene-PHA55_RS16040;Dbxref=Genbank:WP_000440895.1;Name=WP_000440895.1;gbkey=CDS;gene=yeiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416657.1;locus_tag=PHA55_RS16040;product=DUF418 domain-containing protein YeiB;protein_id=WP_000440895.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3265715	3266383	.	-	.	ID=gene-PHA55_RS16045;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=PHA55_RS16045;old_locus_tag=PHA55_16040
NZ_CP116044.1	Protein Homology	CDS	3265715	3266383	.	-	0	ID=cds-WP_001139613.1;Parent=gene-PHA55_RS16045;Dbxref=Genbank:WP_001139613.1;Name=WP_001139613.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311072.1;locus_tag=PHA55_RS16045;product=GTP cyclohydrolase I FolE;protein_id=WP_001139613.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3266641	3267477	.	+	.	ID=gene-PHA55_RS16050;Name=yeiG;gbkey=Gene;gene=yeiG;gene_biotype=protein_coding;locus_tag=PHA55_RS16050;old_locus_tag=PHA55_16045
NZ_CP116044.1	Protein Homology	CDS	3266641	3267477	.	+	0	ID=cds-WP_000425444.1;Parent=gene-PHA55_RS16050;Dbxref=Genbank:WP_000425444.1;Name=WP_000425444.1;gbkey=CDS;gene=yeiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416659.1;locus_tag=PHA55_RS16050;product=S-formylglutathione hydrolase;protein_id=WP_000425444.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3267509	3269500	.	-	.	ID=gene-PHA55_RS16055;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=protein_coding;locus_tag=PHA55_RS16055;old_locus_tag=PHA55_16050
NZ_CP116044.1	Protein Homology	CDS	3267509	3269500	.	-	0	ID=cds-WP_000489249.1;Parent=gene-PHA55_RS16055;Dbxref=Genbank:WP_000489249.1;Name=WP_000489249.1;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416660.1;locus_tag=PHA55_RS16055;product=catecholate siderophore receptor CirA;protein_id=WP_000489249.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3269707	3271176	.	-	.	ID=gene-PHA55_RS16060;Name=lysP;gbkey=Gene;gene=lysP;gene_biotype=protein_coding;locus_tag=PHA55_RS16060;old_locus_tag=PHA55_16055
NZ_CP116044.1	Protein Homology	CDS	3269707	3271176	.	-	0	ID=cds-WP_000253273.1;Parent=gene-PHA55_RS16060;Dbxref=Genbank:WP_000253273.1;Name=WP_000253273.1;gbkey=CDS;gene=lysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416661.1;locus_tag=PHA55_RS16060;product=lysine-specific permease;protein_id=WP_000253273.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3271381	3272262	.	-	.	ID=gene-PHA55_RS16065;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=PHA55_RS16065;old_locus_tag=PHA55_16060
NZ_CP116044.1	Protein Homology	CDS	3271381	3272262	.	-	0	ID=cds-WP_000548294.1;Parent=gene-PHA55_RS16065;Dbxref=Genbank:WP_000548294.1;Name=WP_000548294.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311076.1;locus_tag=PHA55_RS16065;product=DNA-binding transcriptional regulator YeiE;protein_id=WP_000548294.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3272361	3273410	.	+	.	ID=gene-PHA55_RS16070;Name=yeiH;gbkey=Gene;gene=yeiH;gene_biotype=protein_coding;locus_tag=PHA55_RS16070;old_locus_tag=PHA55_16065
NZ_CP116044.1	Protein Homology	CDS	3272361	3273410	.	+	0	ID=cds-WP_000182053.1;Parent=gene-PHA55_RS16070;Dbxref=Genbank:WP_000182053.1;Name=WP_000182053.1;gbkey=CDS;gene=yeiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311077.1;locus_tag=PHA55_RS16070;product=YeiH family protein;protein_id=WP_000182053.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3273484	3274341	.	+	.	ID=gene-PHA55_RS16075;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=PHA55_RS16075;old_locus_tag=PHA55_16070
NZ_CP116044.1	Protein Homology	CDS	3273484	3274341	.	+	0	ID=cds-WP_000873890.1;Parent=gene-PHA55_RS16075;Dbxref=Genbank:WP_000873890.1;Name=WP_000873890.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311078.1;locus_tag=PHA55_RS16075;product=deoxyribonuclease IV;protein_id=WP_000873890.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3274344	3275432	.	+	.	ID=gene-PHA55_RS16080;Name=yeiI;gbkey=Gene;gene=yeiI;gene_biotype=protein_coding;locus_tag=PHA55_RS16080;old_locus_tag=PHA55_16075
NZ_CP116044.1	Protein Homology	CDS	3274344	3275432	.	+	0	ID=cds-WP_001065002.1;Parent=gene-PHA55_RS16080;Dbxref=Genbank:WP_001065002.1;Name=WP_001065002.1;gbkey=CDS;gene=yeiI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416665.1;locus_tag=PHA55_RS16080;product=sugar kinase;protein_id=WP_001065002.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3275488	3276738	.	-	.	ID=gene-PHA55_RS16085;Name=nupX;gbkey=Gene;gene=nupX;gene_biotype=protein_coding;locus_tag=PHA55_RS16085;old_locus_tag=PHA55_16080
NZ_CP116044.1	Protein Homology	CDS	3275488	3276738	.	-	0	ID=cds-WP_001351452.1;Parent=gene-PHA55_RS16085;Dbxref=Genbank:WP_001351452.1;Name=WP_001351452.1;gbkey=CDS;gene=nupX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416666.1;locus_tag=PHA55_RS16085;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_001351452.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3276838	3277779	.	-	.	ID=gene-PHA55_RS16090;Name=rihB;gbkey=Gene;gene=rihB;gene_biotype=protein_coding;locus_tag=PHA55_RS16090;old_locus_tag=PHA55_16085
NZ_CP116044.1	Protein Homology	CDS	3276838	3277779	.	-	0	ID=cds-WP_000415446.1;Parent=gene-PHA55_RS16090;Dbxref=Genbank:WP_000415446.1;Name=WP_000415446.1;gbkey=CDS;gene=rihB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416667.1;locus_tag=PHA55_RS16090;product=ribosylpyrimidine nucleosidase;protein_id=WP_000415446.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3277909	3278607	.	+	.	ID=gene-PHA55_RS16095;Name=yeiL;gbkey=Gene;gene=yeiL;gene_biotype=protein_coding;locus_tag=PHA55_RS16095;old_locus_tag=PHA55_16090
NZ_CP116044.1	Protein Homology	CDS	3277909	3278607	.	+	0	ID=cds-WP_000658575.1;Parent=gene-PHA55_RS16095;Dbxref=Genbank:WP_000658575.1;Name=WP_000658575.1;gbkey=CDS;gene=yeiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311082.4;locus_tag=PHA55_RS16095;product=transcriptional regulator YeiL;protein_id=WP_000658575.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3278675	3279925	.	-	.	ID=gene-PHA55_RS16100;Name=psuT;gbkey=Gene;gene=psuT;gene_biotype=protein_coding;locus_tag=PHA55_RS16100;old_locus_tag=PHA55_16095
NZ_CP116044.1	Protein Homology	CDS	3278675	3279925	.	-	0	ID=cds-WP_063113696.1;Parent=gene-PHA55_RS16100;Dbxref=Genbank:WP_063113696.1;Name=WP_063113696.1;gbkey=CDS;gene=psuT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416669.1;locus_tag=PHA55_RS16100;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_063113696.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3280019	3280957	.	-	.	ID=gene-PHA55_RS16105;Name=psuG;gbkey=Gene;gene=psuG;gene_biotype=protein_coding;locus_tag=PHA55_RS16105;old_locus_tag=PHA55_16100
NZ_CP116044.1	Protein Homology	CDS	3280019	3280957	.	-	0	ID=cds-WP_001292469.1;Parent=gene-PHA55_RS16105;Dbxref=Genbank:WP_001292469.1;Name=WP_001292469.1;gbkey=CDS;gene=psuG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708062.1;locus_tag=PHA55_RS16105;product=pseudouridine-5'-phosphate glycosidase;protein_id=WP_001292469.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3280945	3281886	.	-	.	ID=gene-PHA55_RS16110;Name=psuK;gbkey=Gene;gene=psuK;gene_biotype=protein_coding;locus_tag=PHA55_RS16110;old_locus_tag=PHA55_16105
NZ_CP116044.1	Protein Homology	CDS	3280945	3281886	.	-	0	ID=cds-WP_260589833.1;Parent=gene-PHA55_RS16110;Dbxref=Genbank:WP_260589833.1;Name=WP_260589833.1;gbkey=CDS;gene=psuK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708063.1;locus_tag=PHA55_RS16110;product=pseudouridine kinase;protein_id=WP_260589833.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3282310	3284001	.	-	.	ID=gene-PHA55_RS16115;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=PHA55_RS16115;old_locus_tag=PHA55_16110
NZ_CP116044.1	Protein Homology	CDS	3282310	3284001	.	-	0	ID=cds-WP_000854469.1;Parent=gene-PHA55_RS16115;Dbxref=Genbank:WP_000854469.1;Name=WP_000854469.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708064.1;locus_tag=PHA55_RS16115;product=PTS fructose transporter subunit IIBC;protein_id=WP_000854469.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3284018	3284956	.	-	.	ID=gene-PHA55_RS16120;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=PHA55_RS16120;old_locus_tag=PHA55_16115
NZ_CP116044.1	Protein Homology	CDS	3284018	3284956	.	-	0	ID=cds-WP_000091263.1;Parent=gene-PHA55_RS16120;Dbxref=Genbank:WP_000091263.1;Name=WP_000091263.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311087.1;locus_tag=PHA55_RS16120;product=1-phosphofructokinase;protein_id=WP_000091263.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3284956	3286086	.	-	.	ID=gene-PHA55_RS16125;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=PHA55_RS16125;old_locus_tag=PHA55_16120
NZ_CP116044.1	Protein Homology	CDS	3284956	3286086	.	-	0	ID=cds-WP_000487246.1;Parent=gene-PHA55_RS16125;Dbxref=Genbank:WP_000487246.1;Name=WP_000487246.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311088.1;locus_tag=PHA55_RS16125;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=WP_000487246.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3286454	3287635	.	+	.	ID=gene-PHA55_RS16130;Name=setB;gbkey=Gene;gene=setB;gene_biotype=protein_coding;locus_tag=PHA55_RS16130;old_locus_tag=PHA55_16125
NZ_CP116044.1	Protein Homology	CDS	3286454	3287635	.	+	0	ID=cds-WP_000551969.1;Parent=gene-PHA55_RS16130;Dbxref=Genbank:WP_000551969.1;Name=WP_000551969.1;Ontology_term=GO:0008643,GO:0055085,GO:0005351,GO:0022857,GO:0016020;gbkey=CDS;gene=setB;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416675.1;locus_tag=PHA55_RS16130;product=sugar efflux transporter SetB;protein_id=WP_000551969.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3287632	3287886	.	-	.	ID=gene-PHA55_RS16135;Name=yeiW;gbkey=Gene;gene=yeiW;gene_biotype=protein_coding;locus_tag=PHA55_RS16135;old_locus_tag=PHA55_16130
NZ_CP116044.1	Protein Homology	CDS	3287632	3287886	.	-	0	ID=cds-WP_001349348.1;Parent=gene-PHA55_RS16135;Dbxref=Genbank:WP_001349348.1;Name=WP_001349348.1;gbkey=CDS;gene=yeiW;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588461.1;locus_tag=PHA55_RS16135;product=YkgJ family cysteine cluster protein;protein_id=WP_001349348.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3288041	3288613	.	+	.	ID=gene-PHA55_RS16140;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=PHA55_RS16140;old_locus_tag=PHA55_16135
NZ_CP116044.1	Protein Homology	CDS	3288041	3288613	.	+	0	ID=cds-WP_001136827.1;Parent=gene-PHA55_RS16140;Dbxref=Genbank:WP_001136827.1;Name=WP_001136827.1;Ontology_term=GO:0006414,GO:0043043,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA,peptide biosynthetic process|0043043||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750416.1;locus_tag=PHA55_RS16140;product=elongation factor P-like protein YeiP;protein_id=WP_001136827.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3288836	3290302	.	+	.	ID=gene-PHA55_RS16145;Name=yeiQ;gbkey=Gene;gene=yeiQ;gene_biotype=protein_coding;locus_tag=PHA55_RS16145;old_locus_tag=PHA55_16140
NZ_CP116044.1	Protein Homology	CDS	3288836	3290302	.	+	0	ID=cds-WP_000848214.1;Parent=gene-PHA55_RS16145;Dbxref=Genbank:WP_000848214.1;Name=WP_000848214.1;gbkey=CDS;gene=yeiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416677.1;locus_tag=PHA55_RS16145;product=mannitol dehydrogenase family protein;protein_id=WP_000848214.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3290420	3291406	.	+	.	ID=gene-PHA55_RS16150;Name=yeiR;gbkey=Gene;gene=yeiR;gene_biotype=protein_coding;locus_tag=PHA55_RS16150;old_locus_tag=PHA55_16145
NZ_CP116044.1	Protein Homology	CDS	3290420	3291406	.	+	0	ID=cds-WP_000198822.1;Parent=gene-PHA55_RS16150;Dbxref=Genbank:WP_000198822.1;Name=WP_000198822.1;gbkey=CDS;gene=yeiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708072.1;locus_tag=PHA55_RS16150;product=zinc-binding GTPase YeiR;protein_id=WP_000198822.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3291445	3292158	.	+	.	ID=gene-PHA55_RS16155;Name=lpxT;gbkey=Gene;gene=lpxT;gene_biotype=protein_coding;locus_tag=PHA55_RS16155;old_locus_tag=PHA55_16150
NZ_CP116044.1	Protein Homology	CDS	3291445	3292158	.	+	0	ID=cds-WP_001298785.1;Parent=gene-PHA55_RS16155;Dbxref=Genbank:WP_001298785.1;Name=WP_001298785.1;gbkey=CDS;gene=lpxT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311093.2;locus_tag=PHA55_RS16155;product=Kdo(2)-lipid A phosphotransferase;protein_id=WP_001298785.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3292570	3293136	.	+	.	ID=gene-PHA55_RS16160;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=PHA55_RS16160;old_locus_tag=PHA55_16155
NZ_CP116044.1	Protein Homology	CDS	3292570	3293136	.	+	0	ID=cds-WP_000241011.1;Parent=gene-PHA55_RS16160;Dbxref=Genbank:WP_000241011.1;Name=WP_000241011.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311094.1;locus_tag=PHA55_RS16160;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WP_000241011.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3293317	3294873	.	+	.	ID=gene-PHA55_RS16165;Name=pdeN;gbkey=Gene;gene=pdeN;gene_biotype=protein_coding;locus_tag=PHA55_RS16165;old_locus_tag=PHA55_16160
NZ_CP116044.1	Protein Homology	CDS	3293317	3294873	.	+	0	ID=cds-WP_000470576.1;Parent=gene-PHA55_RS16165;Dbxref=Genbank:WP_000470576.1;Name=WP_000470576.1;gbkey=CDS;gene=pdeN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416681.1;locus_tag=PHA55_RS16165;product=cyclic di-GMP phosphodiesterase;protein_id=WP_000470576.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3294955	3296769	.	+	.	ID=gene-PHA55_RS16170;Name=yejA;gbkey=Gene;gene=yejA;gene_biotype=protein_coding;locus_tag=PHA55_RS16170;old_locus_tag=PHA55_16165
NZ_CP116044.1	Protein Homology	CDS	3294955	3296769	.	+	0	ID=cds-WP_260589835.1;Parent=gene-PHA55_RS16170;Dbxref=Genbank:WP_260589835.1;Name=WP_260589835.1;gbkey=CDS;gene=yejA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311096.2;locus_tag=PHA55_RS16170;product=extracellular solute-binding protein;protein_id=WP_260589835.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3296770	3297864	.	+	.	ID=gene-PHA55_RS16175;Name=yejB;gbkey=Gene;gene=yejB;gene_biotype=protein_coding;locus_tag=PHA55_RS16175;old_locus_tag=PHA55_16170
NZ_CP116044.1	Protein Homology	CDS	3296770	3297864	.	+	0	ID=cds-WP_000501583.1;Parent=gene-PHA55_RS16175;Dbxref=Genbank:WP_000501583.1;Name=WP_000501583.1;gbkey=CDS;gene=yejB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311097.1;locus_tag=PHA55_RS16175;product=microcin C ABC transporter permease YejB;protein_id=WP_000501583.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3297864	3298889	.	+	.	ID=gene-PHA55_RS16180;Name=yejE;gbkey=Gene;gene=yejE;gene_biotype=protein_coding;locus_tag=PHA55_RS16180;old_locus_tag=PHA55_16175
NZ_CP116044.1	Protein Homology	CDS	3297864	3298889	.	+	0	ID=cds-WP_000088916.1;Parent=gene-PHA55_RS16180;Dbxref=Genbank:WP_000088916.1;Name=WP_000088916.1;gbkey=CDS;gene=yejE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708078.1;locus_tag=PHA55_RS16180;product=ABC transporter permease;protein_id=WP_000088916.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3298891	3300480	.	+	.	ID=gene-PHA55_RS16185;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=PHA55_RS16185;old_locus_tag=PHA55_16180
NZ_CP116044.1	Protein Homology	CDS	3298891	3300480	.	+	0	ID=cds-WP_000194940.1;Parent=gene-PHA55_RS16185;Dbxref=Genbank:WP_000194940.1;Name=WP_000194940.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=yejF;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416685.1;locus_tag=PHA55_RS16185;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WP_000194940.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3300484	3300828	.	-	.	ID=gene-PHA55_RS16190;Name=yejG;gbkey=Gene;gene=yejG;gene_biotype=protein_coding;locus_tag=PHA55_RS16190;old_locus_tag=PHA55_16185
NZ_CP116044.1	Protein Homology	CDS	3300484	3300828	.	-	0	ID=cds-WP_000202798.1;Parent=gene-PHA55_RS16190;Dbxref=Genbank:WP_000202798.1;Name=WP_000202798.1;gbkey=CDS;gene=yejG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416686.1;locus_tag=PHA55_RS16190;product=YejG family protein;protein_id=WP_000202798.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3301161	3302351	.	-	.	ID=gene-PHA55_RS16195;Name=bcr;gbkey=Gene;gene=bcr;gene_biotype=protein_coding;locus_tag=PHA55_RS16195;old_locus_tag=PHA55_16190
NZ_CP116044.1	Protein Homology	CDS	3301161	3302351	.	-	0	ID=cds-WP_000213360.1;Parent=gene-PHA55_RS16195;Dbxref=Genbank:WP_000213360.1;Name=WP_000213360.1;gbkey=CDS;gene=bcr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416687.1;locus_tag=PHA55_RS16195;product=multidrug efflux MFS transporter Bcr;protein_id=WP_000213360.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3302379	3303074	.	-	.	ID=gene-PHA55_RS16200;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=PHA55_RS16200;old_locus_tag=PHA55_16195
NZ_CP116044.1	Protein Homology	CDS	3302379	3303074	.	-	0	ID=cds-WP_001234850.1;Parent=gene-PHA55_RS16200;Dbxref=Genbank:WP_001234850.1;Name=WP_001234850.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311102.1;locus_tag=PHA55_RS16200;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_001234850.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3303223	3304983	.	+	.	ID=gene-PHA55_RS16205;Name=radD;gbkey=Gene;gene=radD;gene_biotype=protein_coding;locus_tag=PHA55_RS16205;old_locus_tag=PHA55_16200
NZ_CP116044.1	Protein Homology	CDS	3303223	3304983	.	+	0	ID=cds-WP_000578076.1;Parent=gene-PHA55_RS16205;Dbxref=Genbank:WP_000578076.1;Name=WP_000578076.1;gbkey=CDS;gene=radD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708083.1;locus_tag=PHA55_RS16205;product=DEAD/DEAH box helicase;protein_id=WP_000578076.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3305108	3305392	.	+	.	ID=gene-PHA55_RS16210;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=PHA55_RS16210;old_locus_tag=PHA55_16205
NZ_CP116044.1	Protein Homology	CDS	3305108	3305392	.	+	0	ID=cds-WP_000494183.1;Parent=gene-PHA55_RS16210;Dbxref=Genbank:WP_000494183.1;Name=WP_000494183.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=PHA55_RS16210;product=50S ribosomal protein L25;protein_id=WP_000494183.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3305530	3306537	.	-	.	ID=gene-PHA55_RS16215;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=PHA55_RS16215;old_locus_tag=PHA55_16210
NZ_CP116044.1	Protein Homology	CDS	3305530	3306537	.	-	0	ID=cds-WP_000050789.1;Parent=gene-PHA55_RS16215;Dbxref=Genbank:WP_000050789.1;Name=WP_000050789.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311105.1;locus_tag=PHA55_RS16215;product=nucleoid-associated protein YejK;protein_id=WP_000050789.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3306719	3306946	.	+	.	ID=gene-PHA55_RS16220;Name=yejL;gbkey=Gene;gene=yejL;gene_biotype=protein_coding;locus_tag=PHA55_RS16220;old_locus_tag=PHA55_16215
NZ_CP116044.1	Protein Homology	CDS	3306719	3306946	.	+	0	ID=cds-WP_001135667.1;Parent=gene-PHA55_RS16220;Dbxref=Genbank:WP_001135667.1;Name=WP_001135667.1;gbkey=CDS;gene=yejL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311106.1;locus_tag=PHA55_RS16220;product=YejL family protein;protein_id=WP_001135667.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3306966	3308726	.	+	.	ID=gene-PHA55_RS16225;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=PHA55_RS16225;old_locus_tag=PHA55_16220
NZ_CP116044.1	Protein Homology	CDS	3306966	3308726	.	+	0	ID=cds-WP_000256200.1;Parent=gene-PHA55_RS16225;Dbxref=Genbank:WP_000256200.1;Name=WP_000256200.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311107.1;locus_tag=PHA55_RS16225;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=WP_000256200.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3308801	3308877	.	+	.	ID=gene-PHA55_RS16230;Name=PHA55_RS16230;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS16230;old_locus_tag=PHA55_16225
NZ_CP116044.1	tRNAscan-SE	tRNA	3308801	3308877	.	+	.	ID=rna-PHA55_RS16230;Parent=gene-PHA55_RS16230;anticodon=(pos:3308835..3308837);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS16230;product=tRNA-Pro
NZ_CP116044.1	tRNAscan-SE	exon	3308801	3308877	.	+	.	ID=exon-PHA55_RS16230-1;Parent=rna-PHA55_RS16230;anticodon=(pos:3308835..3308837);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS16230;product=tRNA-Pro
NZ_CP116044.1	RefSeq	pseudogene	3308981	3311572	.	-	.	ID=gene-PHA55_RS16235;Name=yejO;gbkey=Gene;gene=yejO;gene_biotype=pseudogene;locus_tag=PHA55_RS16235;old_locus_tag=PHA55_16230;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	3308981	3311572	.	-	0	ID=cds-PHA55_RS16235;Parent=gene-PHA55_RS16235;Note=internal stop;gbkey=CDS;gene=yejO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311108.2;locus_tag=PHA55_RS16235;product=autotransporter YejO;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	3311892	3312539	.	+	.	ID=gene-PHA55_RS16240;Name=narP;gbkey=Gene;gene=narP;gene_biotype=protein_coding;locus_tag=PHA55_RS16240;old_locus_tag=PHA55_16235
NZ_CP116044.1	Protein Homology	CDS	3311892	3312539	.	+	0	ID=cds-WP_001113637.1;Parent=gene-PHA55_RS16240;Dbxref=Genbank:WP_001113637.1;Name=WP_001113637.1;gbkey=CDS;gene=narP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311109.1;locus_tag=PHA55_RS16240;product=nitrate/nitrite response regulator protein NarP;protein_id=WP_001113637.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3312574	3313626	.	-	.	ID=gene-PHA55_RS16245;Name=ccmH;gbkey=Gene;gene=ccmH;gene_biotype=protein_coding;locus_tag=PHA55_RS16245;old_locus_tag=PHA55_16240
NZ_CP116044.1	Protein Homology	CDS	3312574	3313626	.	-	0	ID=cds-WP_001211568.1;Parent=gene-PHA55_RS16245;Dbxref=Genbank:WP_001211568.1;Name=WP_001211568.1;gbkey=CDS;gene=ccmH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416698.1;locus_tag=PHA55_RS16245;product=cytochrome c-type biogenesis thiol:disulfide oxidoreductase CcmH;protein_id=WP_001211568.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3313623	3314180	.	-	.	ID=gene-PHA55_RS16250;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=PHA55_RS16250;old_locus_tag=PHA55_16245
NZ_CP116044.1	Protein Homology	CDS	3313623	3314180	.	-	0	ID=cds-WP_000824439.1;Parent=gene-PHA55_RS16250;Dbxref=Genbank:WP_000824439.1;Name=WP_000824439.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311111.1;locus_tag=PHA55_RS16250;product=thiol:disulfide interchange protein DsbE;protein_id=WP_000824439.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3314177	3316120	.	-	.	ID=gene-PHA55_RS16255;Name=ccmF;gbkey=Gene;gene=ccmF;gene_biotype=protein_coding;locus_tag=PHA55_RS16255;old_locus_tag=PHA55_16250
NZ_CP116044.1	Protein Homology	CDS	3314177	3316120	.	-	0	ID=cds-WP_000982447.1;Parent=gene-PHA55_RS16255;Dbxref=Genbank:WP_000982447.1;Name=WP_000982447.1;gbkey=CDS;gene=ccmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416700.1;locus_tag=PHA55_RS16255;product=cytochrome c-type biogenesis heme lyase CcmF;protein_id=WP_000982447.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3316117	3316596	.	-	.	ID=gene-PHA55_RS16260;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=PHA55_RS16260;old_locus_tag=PHA55_16255
NZ_CP116044.1	Protein Homology	CDS	3316117	3316596	.	-	0	ID=cds-WP_001026418.1;Parent=gene-PHA55_RS16260;Dbxref=Genbank:WP_001026418.1;Name=WP_001026418.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311113.1;locus_tag=PHA55_RS16260;product=cytochrome c maturation protein CcmE;protein_id=WP_001026418.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3316593	3316802	.	-	.	ID=gene-PHA55_RS16265;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=PHA55_RS16265;old_locus_tag=PHA55_16260
NZ_CP116044.1	Protein Homology	CDS	3316593	3316802	.	-	0	ID=cds-WP_000186540.1;Parent=gene-PHA55_RS16265;Dbxref=Genbank:WP_000186540.1;Name=WP_000186540.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311114.1;locus_tag=PHA55_RS16265;product=heme exporter protein CcmD;protein_id=WP_000186540.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3316799	3317536	.	-	.	ID=gene-PHA55_RS16270;Name=ccmC;gbkey=Gene;gene=ccmC;gene_biotype=protein_coding;locus_tag=PHA55_RS16270;old_locus_tag=PHA55_16265
NZ_CP116044.1	Protein Homology	CDS	3316799	3317536	.	-	0	ID=cds-WP_001295447.1;Parent=gene-PHA55_RS16270;Dbxref=Genbank:WP_001295447.1;Name=WP_001295447.1;gbkey=CDS;gene=ccmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311115.1;locus_tag=PHA55_RS16270;product=heme exporter protein CcmC;protein_id=WP_001295447.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3317578	3318240	.	-	.	ID=gene-PHA55_RS16275;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=PHA55_RS16275;old_locus_tag=PHA55_16270
NZ_CP116044.1	Protein Homology	CDS	3317578	3318240	.	-	0	ID=cds-WP_000971730.1;Parent=gene-PHA55_RS16275;Dbxref=Genbank:WP_000971730.1;Name=WP_000971730.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311116.1;locus_tag=PHA55_RS16275;product=heme exporter protein CcmB;protein_id=WP_000971730.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3318237	3318860	.	-	.	ID=gene-PHA55_RS16280;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=PHA55_RS16280;old_locus_tag=PHA55_16275
NZ_CP116044.1	Protein Homology	CDS	3318237	3318860	.	-	0	ID=cds-WP_000525587.1;Parent=gene-PHA55_RS16280;Dbxref=Genbank:WP_000525587.1;Name=WP_000525587.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416705.2;locus_tag=PHA55_RS16280;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WP_000525587.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3318873	3319475	.	-	.	ID=gene-PHA55_RS16285;Name=napC;gbkey=Gene;gene=napC;gene_biotype=protein_coding;locus_tag=PHA55_RS16285;old_locus_tag=PHA55_16280
NZ_CP116044.1	Protein Homology	CDS	3318873	3319475	.	-	0	ID=cds-WP_000528376.1;Parent=gene-PHA55_RS16285;Dbxref=Genbank:WP_000528376.1;Name=WP_000528376.1;gbkey=CDS;gene=napC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311118.1;locus_tag=PHA55_RS16285;product=cytochrome c-type protein NapC;protein_id=WP_000528376.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3319485	3319934	.	-	.	ID=gene-PHA55_RS16290;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=PHA55_RS16290;old_locus_tag=PHA55_16285
NZ_CP116044.1	Protein Homology	CDS	3319485	3319934	.	-	0	ID=cds-WP_000835177.1;Parent=gene-PHA55_RS16290;Dbxref=Genbank:WP_000835177.1;Name=WP_000835177.1;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311119.2;locus_tag=PHA55_RS16290;product=nitrate reductase cytochrome c-type subunit;protein_id=WP_000835177.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3319931	3320794	.	-	.	ID=gene-PHA55_RS16295;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=PHA55_RS16295;old_locus_tag=PHA55_16290
NZ_CP116044.1	Protein Homology	CDS	3319931	3320794	.	-	0	ID=cds-WP_000013515.1;Parent=gene-PHA55_RS16295;Dbxref=Genbank:WP_000013515.1;Name=WP_000013515.1;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416708.1;locus_tag=PHA55_RS16295;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=WP_000013515.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3320781	3321476	.	-	.	ID=gene-PHA55_RS16300;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=PHA55_RS16300;old_locus_tag=PHA55_16295
NZ_CP116044.1	Protein Homology	CDS	3320781	3321476	.	-	0	ID=cds-WP_000091291.1;Parent=gene-PHA55_RS16300;Dbxref=Genbank:WP_000091291.1;Name=WP_000091291.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416709.1;locus_tag=PHA55_RS16300;product=ferredoxin-type protein NapG;protein_id=WP_000091291.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3321483	3323969	.	-	.	ID=gene-PHA55_RS16305;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=PHA55_RS16305;old_locus_tag=PHA55_16300
NZ_CP116044.1	Protein Homology	CDS	3321483	3323969	.	-	0	ID=cds-WP_000778067.1;Parent=gene-PHA55_RS16305;Dbxref=Genbank:WP_000778067.1;Name=WP_000778067.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=napA;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311122.1;locus_tag=PHA55_RS16305;product=periplasmic nitrate reductase subunit alpha;protein_id=WP_000778067.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3323966	3324229	.	-	.	ID=gene-PHA55_RS16310;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=PHA55_RS16310;old_locus_tag=PHA55_16305
NZ_CP116044.1	Protein Homology	CDS	3323966	3324229	.	-	0	ID=cds-WP_000557378.1;Parent=gene-PHA55_RS16310;Dbxref=Genbank:WP_000557378.1;Name=WP_000557378.1;gbkey=CDS;gene=napD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311123.1;locus_tag=PHA55_RS16310;product=chaperone NapD;protein_id=WP_000557378.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3324219	3324713	.	-	.	ID=gene-PHA55_RS16315;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=PHA55_RS16315;old_locus_tag=PHA55_16310
NZ_CP116044.1	Protein Homology	CDS	3324219	3324713	.	-	0	ID=cds-WP_000686723.1;Parent=gene-PHA55_RS16315;Dbxref=Genbank:WP_000686723.1;Name=WP_000686723.1;Ontology_term=GO:0051539;gbkey=CDS;gene=napF;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311124.1;locus_tag=PHA55_RS16315;product=ferredoxin-type protein NapF;protein_id=WP_000686723.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3324822	3324986	.	+	.	ID=gene-PHA55_RS16320;Name=yojO;gbkey=Gene;gene=yojO;gene_biotype=protein_coding;locus_tag=PHA55_RS16320;old_locus_tag=PHA55_16315
NZ_CP116044.1	Protein Homology	CDS	3324822	3324986	.	+	0	ID=cds-WP_001296837.1;Parent=gene-PHA55_RS16320;Dbxref=Genbank:WP_001296837.1;Name=WP_001296837.1;gbkey=CDS;gene=yojO;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518801.1;locus_tag=PHA55_RS16320;product=protein YojO;protein_id=WP_001296837.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3325100	3325609	.	+	.	ID=gene-PHA55_RS16325;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=PHA55_RS16325;old_locus_tag=PHA55_16320
NZ_CP116044.1	Protein Homology	CDS	3325100	3325609	.	+	0	ID=cds-WP_000712252.1;Parent=gene-PHA55_RS16325;Dbxref=Genbank:WP_000712252.1;Name=WP_000712252.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785302.1;locus_tag=PHA55_RS16325;product=serine protease inhibitor ecotin;protein_id=WP_000712252.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3325758	3327404	.	-	.	ID=gene-PHA55_RS16330;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=PHA55_RS16330;old_locus_tag=PHA55_16325
NZ_CP116044.1	Protein Homology	CDS	3325758	3327404	.	-	0	ID=cds-WP_000758074.1;Parent=gene-PHA55_RS16330;Dbxref=Genbank:WP_000758074.1;Name=WP_000758074.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311126.1;locus_tag=PHA55_RS16330;product=malate dehydrogenase (quinone);protein_id=WP_000758074.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3327622	3329265	.	-	.	ID=gene-PHA55_RS16335;Name=yojI;gbkey=Gene;gene=yojI;gene_biotype=protein_coding;locus_tag=PHA55_RS16335;old_locus_tag=PHA55_16330
NZ_CP116044.1	Protein Homology	CDS	3327622	3329265	.	-	0	ID=cds-WP_000422188.1;Parent=gene-PHA55_RS16335;Dbxref=Genbank:WP_000422188.1;Name=WP_000422188.1;gbkey=CDS;gene=yojI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416715.1;locus_tag=PHA55_RS16335;product=microcin J25 efflux ABC transporter YojI;protein_id=WP_000422188.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3329341	3329991	.	-	.	ID=gene-PHA55_RS16340;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=PHA55_RS16340;old_locus_tag=PHA55_16335
NZ_CP116044.1	Protein Homology	CDS	3329341	3329991	.	-	0	ID=cds-WP_000884917.1;Parent=gene-PHA55_RS16340;Dbxref=Genbank:WP_000884917.1;Name=WP_000884917.1;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311128.1;locus_tag=PHA55_RS16340;product=DNA oxidative demethylase AlkB;protein_id=WP_000884917.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3329991	3331055	.	-	.	ID=gene-PHA55_RS16345;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=PHA55_RS16345;old_locus_tag=PHA55_16340
NZ_CP116044.1	Protein Homology	CDS	3329991	3331055	.	-	0	ID=cds-WP_271287465.1;Parent=gene-PHA55_RS16345;Dbxref=Genbank:WP_271287465.1;Name=WP_271287465.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416717.1;locus_tag=PHA55_RS16345;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_271287465.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3331129	3332184	.	-	.	ID=gene-PHA55_RS16350;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;locus_tag=PHA55_RS16350;old_locus_tag=PHA55_16345
NZ_CP116044.1	Protein Homology	CDS	3331129	3332184	.	-	0	ID=cds-WP_000406101.1;Parent=gene-PHA55_RS16350;Dbxref=Genbank:WP_000406101.1;Name=WP_000406101.1;Ontology_term=GO:0017013;gbkey=CDS;gene=apbE;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311130.1;locus_tag=PHA55_RS16350;product=FAD:protein FMN transferase ApbE;protein_id=WP_000406101.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3332296	3333399	.	-	.	ID=gene-PHA55_RS16355;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=PHA55_RS16355;old_locus_tag=PHA55_16350
NZ_CP116044.1	Protein Homology	CDS	3332296	3333399	.	-	0	ID=cds-WP_000865571.1;Parent=gene-PHA55_RS16355;Dbxref=Genbank:WP_000865571.1;Name=WP_000865571.1;gbkey=CDS;gene=ompC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416719.1;locus_tag=PHA55_RS16355;product=porin OmpC;protein_id=WP_000865571.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3334137	3336809	.	+	.	ID=gene-PHA55_RS16360;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=PHA55_RS16360;old_locus_tag=PHA55_16355
NZ_CP116044.1	Protein Homology	CDS	3334137	3336809	.	+	0	ID=cds-WP_001249138.1;Parent=gene-PHA55_RS16360;Dbxref=Genbank:WP_001249138.1;Name=WP_001249138.1;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311132.1;locus_tag=PHA55_RS16360;product=phosphotransferase RcsD;protein_id=WP_001249138.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3336826	3337476	.	+	.	ID=gene-PHA55_RS16365;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=PHA55_RS16365;old_locus_tag=PHA55_16360
NZ_CP116044.1	Protein Homology	CDS	3336826	3337476	.	+	0	ID=cds-WP_001061917.1;Parent=gene-PHA55_RS16365;Dbxref=Genbank:WP_001061917.1;Name=WP_001061917.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311133.1;locus_tag=PHA55_RS16365;product=response regulator transcription factor RcsB;protein_id=WP_001061917.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3337676	3340525	.	-	.	ID=gene-PHA55_RS16370;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=PHA55_RS16370;old_locus_tag=PHA55_16365
NZ_CP116044.1	Protein Homology	CDS	3337676	3340525	.	-	0	ID=cds-WP_000876014.1;Parent=gene-PHA55_RS16370;Dbxref=Genbank:WP_000876014.1;Name=WP_000876014.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416722.2;locus_tag=PHA55_RS16370;product=two-component system sensor histidine kinase RcsC;protein_id=WP_000876014.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3340800	3341576	.	-	.	ID=gene-PHA55_RS16375;Name=yfaP;gbkey=Gene;gene=yfaP;gene_biotype=protein_coding;locus_tag=PHA55_RS16375;old_locus_tag=PHA55_16370
NZ_CP116044.1	Protein Homology	CDS	3340800	3341576	.	-	0	ID=cds-WP_001225868.1;Parent=gene-PHA55_RS16375;Dbxref=Genbank:WP_001225868.1;Name=WP_001225868.1;gbkey=CDS;gene=yfaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311135.1;locus_tag=PHA55_RS16375;product=YfaP family protein;protein_id=WP_001225868.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3341581	3343230	.	-	.	ID=gene-PHA55_RS16380;Name=yfaQ;gbkey=Gene;gene=yfaQ;gene_biotype=protein_coding;locus_tag=PHA55_RS16380;old_locus_tag=PHA55_16375
NZ_CP116044.1	Protein Homology	CDS	3341581	3343230	.	-	0	ID=cds-WP_001593536.1;Parent=gene-PHA55_RS16380;Dbxref=Genbank:WP_001593536.1;Name=WP_001593536.1;gbkey=CDS;gene=yfaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416730.1;locus_tag=PHA55_RS16380;product=YfaQ family protein;protein_id=WP_001593536.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3343231	3347745	.	-	.	ID=gene-PHA55_RS16385;Name=PHA55_RS16385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS16385;old_locus_tag=PHA55_16380
NZ_CP116044.1	Protein Homology	CDS	3343231	3347745	.	-	0	ID=cds-WP_050867556.1;Parent=gene-PHA55_RS16385;Dbxref=Genbank:WP_050867556.1;Name=WP_050867556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000536590.1;locus_tag=PHA55_RS16385;product=alpha-2-macroglobulin;protein_id=WP_050867556.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3347769	3348392	.	-	.	ID=gene-PHA55_RS16390;Name=yfaT;gbkey=Gene;gene=yfaT;gene_biotype=protein_coding;locus_tag=PHA55_RS16390;old_locus_tag=PHA55_16385
NZ_CP116044.1	Protein Homology	CDS	3347769	3348392	.	-	0	ID=cds-WP_001298790.1;Parent=gene-PHA55_RS16390;Dbxref=Genbank:WP_001298790.1;Name=WP_001298790.1;gbkey=CDS;gene=yfaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311139.2;locus_tag=PHA55_RS16390;product=DUF1175 domain-containing protein;protein_id=WP_001298790.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3348389	3350077	.	-	.	ID=gene-PHA55_RS16395;Name=yfaA;gbkey=Gene;gene=yfaA;gene_biotype=protein_coding;locus_tag=PHA55_RS16395;old_locus_tag=PHA55_16390
NZ_CP116044.1	Protein Homology	CDS	3348389	3350077	.	-	0	ID=cds-WP_046880385.1;Parent=gene-PHA55_RS16395;Dbxref=Genbank:WP_046880385.1;Name=WP_046880385.1;gbkey=CDS;gene=yfaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416733.4;locus_tag=PHA55_RS16395;product=DUF2138 domain-containing protein;protein_id=WP_046880385.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3350226	3352853	.	-	.	ID=gene-PHA55_RS16400;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=PHA55_RS16400;old_locus_tag=PHA55_16395
NZ_CP116044.1	Protein Homology	CDS	3350226	3352853	.	-	0	ID=cds-WP_001281242.1;Parent=gene-PHA55_RS16400;Dbxref=Genbank:WP_001281242.1;Name=WP_001281242.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416734.1;locus_tag=PHA55_RS16400;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_001281242.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3353000	3353722	.	+	.	ID=gene-PHA55_RS16405;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=PHA55_RS16405;old_locus_tag=PHA55_16400
NZ_CP116044.1	Protein Homology	CDS	3353000	3353722	.	+	0	ID=cds-WP_000990765.1;Parent=gene-PHA55_RS16405;Dbxref=Genbank:WP_000990765.1;Name=WP_000990765.1;gbkey=CDS;gene=ubiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416735.1;locus_tag=PHA55_RS16405;product=bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase;protein_id=WP_000990765.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3353783	3357541	.	-	.	ID=gene-PHA55_RS16410;Name=yfaL;gbkey=Gene;gene=yfaL;gene_biotype=protein_coding;locus_tag=PHA55_RS16410;old_locus_tag=PHA55_16405
NZ_CP116044.1	Protein Homology	CDS	3353783	3357541	.	-	0	ID=cds-WP_057107012.1;Parent=gene-PHA55_RS16410;Dbxref=Genbank:WP_057107012.1;Name=WP_057107012.1;Ontology_term=GO:0019867;gbkey=CDS;gene=yfaL;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416736.1;locus_tag=PHA55_RS16410;product=AIDA-I family autotransporter adhesin YfaL/EhaC;protein_id=WP_057107012.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3357966	3358109	.	-	.	ID=gene-PHA55_RS16415;Name=ypaB;gbkey=Gene;gene=ypaB;gene_biotype=protein_coding;locus_tag=PHA55_RS16415;old_locus_tag=PHA55_16410
NZ_CP116044.1	Protein Homology	CDS	3357966	3358109	.	-	0	ID=cds-WP_001300064.1;Parent=gene-PHA55_RS16415;Dbxref=Genbank:WP_001300064.1;Name=WP_001300064.1;gbkey=CDS;gene=ypaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001753443.1;locus_tag=PHA55_RS16415;product=protein YpaB;protein_id=WP_001300064.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3358237	3360522	.	+	.	ID=gene-PHA55_RS16420;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=PHA55_RS16420;old_locus_tag=PHA55_16415
NZ_CP116044.1	Protein Homology	CDS	3358237	3360522	.	+	0	ID=cds-WP_096958447.1;Parent=gene-PHA55_RS16420;Dbxref=Genbank:WP_096958447.1;Name=WP_096958447.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=PHA55_RS16420;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_096958447.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	3360635	3360670	.	-	.	ID=gene-PHA55_RS16425;Name=PHA55_RS16425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS16425;old_locus_tag=PHA55_16420;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	3360635	3360670	.	-	0	ID=cds-PHA55_RS16425;Parent=gene-PHA55_RS16425;Note=too short;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051189.1;locus_tag=PHA55_RS16425;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	3360669	3361799	.	+	.	ID=gene-PHA55_RS16430;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=PHA55_RS16430;old_locus_tag=PHA55_16425
NZ_CP116044.1	Protein Homology	CDS	3360669	3361799	.	+	0	ID=cds-WP_000332036.1;Parent=gene-PHA55_RS16430;Dbxref=Genbank:WP_000332036.1;Name=WP_000332036.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=PHA55_RS16430;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_000332036.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3361799	3362053	.	+	.	ID=gene-PHA55_RS16435;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=PHA55_RS16435;old_locus_tag=PHA55_16430
NZ_CP116044.1	Protein Homology	CDS	3361799	3362053	.	+	0	ID=cds-WP_000135040.1;Parent=gene-PHA55_RS16435;Dbxref=Genbank:WP_000135040.1;Name=WP_000135040.1;gbkey=CDS;gene=yfaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416739.1;locus_tag=PHA55_RS16435;product=ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE;protein_id=WP_000135040.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3362107	3362757	.	-	.	ID=gene-PHA55_RS16440;Name=inaA;gbkey=Gene;gene=inaA;gene_biotype=protein_coding;locus_tag=PHA55_RS16440;old_locus_tag=PHA55_16435
NZ_CP116044.1	Protein Homology	CDS	3362107	3362757	.	-	0	ID=cds-WP_000301049.1;Parent=gene-PHA55_RS16440;Dbxref=Genbank:WP_000301049.1;Name=WP_000301049.1;gbkey=CDS;gene=inaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416740.1;locus_tag=PHA55_RS16440;product=lipopolysaccharide kinase InaA;protein_id=WP_000301049.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	3362837	3362941	.	-	.	ID=gene-PHA55_RS16445;Name=PHA55_RS16445;end_range=3362941,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS16445;old_locus_tag=PHA55_16440;partial=true;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	3362837	3362941	.	-	0	ID=cds-PHA55_RS16445;Parent=gene-PHA55_RS16445;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3362941,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311148.1;locus_tag=PHA55_RS16445;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	3362939	3363178	.	+	.	ID=gene-PHA55_RS16450;Name=PHA55_RS16450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS16450;old_locus_tag=PHA55_16445;partial=true;pseudo=true;start_range=.,3362939
NZ_CP116044.1	Protein Homology	CDS	3362939	3363178	.	+	0	ID=cds-PHA55_RS16450;Parent=gene-PHA55_RS16450;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311149.1;locus_tag=PHA55_RS16450;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,3362939;transl_table=11
NZ_CP116044.1	RefSeq	gene	3363220	3364296	.	-	.	ID=gene-PHA55_RS16455;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=PHA55_RS16455;old_locus_tag=PHA55_16450
NZ_CP116044.1	Protein Homology	CDS	3363220	3364296	.	-	0	ID=cds-WP_000779084.1;Parent=gene-PHA55_RS16455;Dbxref=Genbank:WP_000779084.1;Name=WP_000779084.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311151.1;locus_tag=PHA55_RS16455;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000779084.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3364301	3365659	.	-	.	ID=gene-PHA55_RS16460;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=PHA55_RS16460;old_locus_tag=PHA55_16455
NZ_CP116044.1	Protein Homology	CDS	3364301	3365659	.	-	0	ID=cds-WP_000948732.1;Parent=gene-PHA55_RS16460;Dbxref=Genbank:WP_000948732.1;Name=WP_000948732.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416743.1;locus_tag=PHA55_RS16460;product=glycerol-3-phosphate transporter;protein_id=WP_000948732.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3365932	3367560	.	+	.	ID=gene-PHA55_RS16465;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=PHA55_RS16465;old_locus_tag=PHA55_16460
NZ_CP116044.1	Protein Homology	CDS	3365932	3367560	.	+	0	ID=cds-WP_000857257.1;Parent=gene-PHA55_RS16465;Dbxref=Genbank:WP_000857257.1;Name=WP_000857257.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311153.1;locus_tag=PHA55_RS16465;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_000857257.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3367550	3368809	.	+	.	ID=gene-PHA55_RS16470;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=PHA55_RS16470;old_locus_tag=PHA55_16465
NZ_CP116044.1	Protein Homology	CDS	3367550	3368809	.	+	0	ID=cds-WP_001209921.1;Parent=gene-PHA55_RS16470;Dbxref=Genbank:WP_001209921.1;Name=WP_001209921.1;Ontology_term=GO:0004368;gbkey=CDS;gene=glpB;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416745.1;locus_tag=PHA55_RS16470;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WP_001209921.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3368806	3369996	.	+	.	ID=gene-PHA55_RS16475;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=PHA55_RS16475;old_locus_tag=PHA55_16470
NZ_CP116044.1	Protein Homology	CDS	3368806	3369996	.	+	0	ID=cds-WP_001000358.1;Parent=gene-PHA55_RS16475;Dbxref=Genbank:WP_001000358.1;Name=WP_001000358.1;Ontology_term=GO:0006071,GO:0004368,GO:0051536,GO:0009331;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311155.1;locus_tag=PHA55_RS16475;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=WP_001000358.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3370190	3371092	.	+	.	ID=gene-PHA55_RS16480;Name=rpnE;gbkey=Gene;gene=rpnE;gene_biotype=protein_coding;locus_tag=PHA55_RS16480;old_locus_tag=PHA55_16475
NZ_CP116044.1	Protein Homology	CDS	3370190	3371092	.	+	0	ID=cds-WP_000140570.1;Parent=gene-PHA55_RS16480;Dbxref=Genbank:WP_000140570.1;Name=WP_000140570.1;gbkey=CDS;gene=rpnE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311156.1;locus_tag=PHA55_RS16480;product=ISNCY family transposase;protein_id=WP_000140570.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	3371133	3371594	.	-	.	ID=gene-PHA55_RS16485;Name=PHA55_RS16485;end_range=3371594,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS16485;old_locus_tag=PHA55_16480;partial=true;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	3371133	3371594	.	-	0	ID=cds-PHA55_RS16485;Parent=gene-PHA55_RS16485;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0003824;end_range=3371594,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416748.1;locus_tag=PHA55_RS16485;partial=true;product=aldolase/citrate lyase family protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	3371658	3372860	.	-	.	ID=gene-PHA55_RS16490;Name=yfaY;gbkey=Gene;gene=yfaY;gene_biotype=protein_coding;locus_tag=PHA55_RS16490;old_locus_tag=PHA55_16485
NZ_CP116044.1	Protein Homology	CDS	3371658	3372860	.	-	0	ID=cds-WP_000921619.1;Parent=gene-PHA55_RS16490;Dbxref=Genbank:WP_000921619.1;Name=WP_000921619.1;gbkey=CDS;gene=yfaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416752.1;locus_tag=PHA55_RS16490;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=WP_000921619.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3372960	3373502	.	-	.	ID=gene-PHA55_RS16495;Name=yfaZ;gbkey=Gene;gene=yfaZ;gene_biotype=protein_coding;locus_tag=PHA55_RS16495;old_locus_tag=PHA55_16490
NZ_CP116044.1	Protein Homology	CDS	3372960	3373502	.	-	0	ID=cds-WP_000717009.1;Parent=gene-PHA55_RS16495;Dbxref=Genbank:WP_000717009.1;Name=WP_000717009.1;gbkey=CDS;gene=yfaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311165.2;locus_tag=PHA55_RS16495;product=YfaZ family outer membrane protein;protein_id=WP_000717009.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3373781	3374206	.	+	.	ID=gene-PHA55_RS16500;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=protein_coding;locus_tag=PHA55_RS16500;old_locus_tag=PHA55_16495
NZ_CP116044.1	Protein Homology	CDS	3373781	3374206	.	+	0	ID=cds-WP_001249889.1;Parent=gene-PHA55_RS16500;Dbxref=Genbank:WP_001249889.1;Name=WP_001249889.1;Ontology_term=GO:0016818;gbkey=CDS;gene=nudI;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311166.1;locus_tag=PHA55_RS16500;product=nucleoside triphosphatase NudI;protein_id=WP_001249889.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3374245	3374847	.	-	.	ID=gene-PHA55_RS16505;Name=ais;gbkey=Gene;gene=ais;gene_biotype=protein_coding;locus_tag=PHA55_RS16505;old_locus_tag=PHA55_16500
NZ_CP116044.1	Protein Homology	CDS	3374245	3374847	.	-	0	ID=cds-WP_001297077.1;Parent=gene-PHA55_RS16505;Dbxref=Genbank:WP_001297077.1;Name=WP_001297077.1;gbkey=CDS;gene=ais;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311167.1;locus_tag=PHA55_RS16505;product=lipopolysaccharide core heptose(II)-phosphate phosphatase Ais;protein_id=WP_001297077.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3375155	3376294	.	+	.	ID=gene-PHA55_RS16510;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=PHA55_RS16510;old_locus_tag=PHA55_16505
NZ_CP116044.1	Protein Homology	CDS	3375155	3376294	.	+	0	ID=cds-WP_001461266.1;Parent=gene-PHA55_RS16510;Dbxref=Genbank:WP_001461266.1;Name=WP_001461266.1;Ontology_term=GO:0008483;gbkey=CDS;gene=arnB;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024188371.1;locus_tag=PHA55_RS16510;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=WP_001461266.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3376298	3377266	.	+	.	ID=gene-PHA55_RS16515;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=PHA55_RS16515;old_locus_tag=PHA55_16510
NZ_CP116044.1	Protein Homology	CDS	3376298	3377266	.	+	0	ID=cds-WP_000461657.1;Parent=gene-PHA55_RS16515;Dbxref=Genbank:WP_000461657.1;Name=WP_000461657.1;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416757.1;locus_tag=PHA55_RS16515;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_000461657.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3377266	3379248	.	+	.	ID=gene-PHA55_RS16520;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=PHA55_RS16520;old_locus_tag=PHA55_16515
NZ_CP116044.1	Protein Homology	CDS	3377266	3379248	.	+	0	ID=cds-WP_001461267.1;Parent=gene-PHA55_RS16520;Dbxref=Genbank:WP_001461267.1;Name=WP_001461267.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311170.1;locus_tag=PHA55_RS16520;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WP_001461267.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3379245	3380135	.	+	.	ID=gene-PHA55_RS16525;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=PHA55_RS16525;old_locus_tag=PHA55_16520
NZ_CP116044.1	Protein Homology	CDS	3379245	3380135	.	+	0	ID=cds-WP_000169728.1;Parent=gene-PHA55_RS16525;Dbxref=Genbank:WP_000169728.1;Name=WP_000169728.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416759.1;locus_tag=PHA55_RS16525;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=WP_000169728.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3380135	3381787	.	+	.	ID=gene-PHA55_RS16530;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=PHA55_RS16530;old_locus_tag=PHA55_16525
NZ_CP116044.1	Protein Homology	CDS	3380135	3381787	.	+	0	ID=cds-WP_180489265.1;Parent=gene-PHA55_RS16530;Dbxref=Genbank:WP_180489265.1;Name=WP_180489265.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416760.1;locus_tag=PHA55_RS16530;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WP_180489265.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3381784	3382119	.	+	.	ID=gene-PHA55_RS16535;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=PHA55_RS16535;old_locus_tag=PHA55_16530
NZ_CP116044.1	Protein Homology	CDS	3381784	3382119	.	+	0	ID=cds-WP_000638031.1;Parent=gene-PHA55_RS16535;Dbxref=Genbank:WP_000638031.1;Name=WP_000638031.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588462.1;locus_tag=PHA55_RS16535;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_000638031.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3382119	3382505	.	+	.	ID=gene-PHA55_RS16540;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=PHA55_RS16540;old_locus_tag=PHA55_16535
NZ_CP116044.1	Protein Homology	CDS	3382119	3382505	.	+	0	ID=cds-WP_000523005.1;Parent=gene-PHA55_RS16540;Dbxref=Genbank:WP_000523005.1;Name=WP_000523005.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311173.2;locus_tag=PHA55_RS16540;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_000523005.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3382499	3382765	.	-	.	ID=gene-PHA55_RS16545;Name=pmrD;gbkey=Gene;gene=pmrD;gene_biotype=protein_coding;locus_tag=PHA55_RS16545;old_locus_tag=PHA55_16540
NZ_CP116044.1	Protein Homology	CDS	3382499	3382765	.	-	0	ID=cds-WP_001297080.1;Parent=gene-PHA55_RS16545;Dbxref=Genbank:WP_001297080.1;Name=WP_001297080.1;gbkey=CDS;gene=pmrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416762.2;locus_tag=PHA55_RS16545;product=signal transduction protein PmrD;protein_id=WP_001297080.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3382875	3384230	.	-	.	ID=gene-PHA55_RS16550;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=PHA55_RS16550;old_locus_tag=PHA55_16545
NZ_CP116044.1	Protein Homology	CDS	3382875	3384230	.	-	0	ID=cds-WP_000577556.1;Parent=gene-PHA55_RS16550;Dbxref=Genbank:WP_000577556.1;Name=WP_000577556.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708146.1;locus_tag=PHA55_RS16550;product=o-succinylbenzoate--CoA ligase;protein_id=WP_000577556.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3384227	3385189	.	-	.	ID=gene-PHA55_RS16555;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=PHA55_RS16555;old_locus_tag=PHA55_16550
NZ_CP116044.1	Protein Homology	CDS	3384227	3385189	.	-	0	ID=cds-WP_271287466.1;Parent=gene-PHA55_RS16555;Dbxref=Genbank:WP_271287466.1;Name=WP_271287466.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311176.1;locus_tag=PHA55_RS16555;product=o-succinylbenzoate synthase;protein_id=WP_271287466.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3385189	3386046	.	-	.	ID=gene-PHA55_RS16560;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=PHA55_RS16560;old_locus_tag=PHA55_16555
NZ_CP116044.1	Protein Homology	CDS	3385189	3386046	.	-	0	ID=cds-WP_000639996.1;Parent=gene-PHA55_RS16560;Dbxref=Genbank:WP_000639996.1;Name=WP_000639996.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641973.1;locus_tag=PHA55_RS16560;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_000639996.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3386061	3386819	.	-	.	ID=gene-PHA55_RS16565;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=PHA55_RS16565;old_locus_tag=PHA55_16560
NZ_CP116044.1	Protein Homology	CDS	3386061	3386819	.	-	0	ID=cds-WP_000600496.1;Parent=gene-PHA55_RS16565;Dbxref=Genbank:WP_000600496.1;Name=WP_000600496.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416766.1;locus_tag=PHA55_RS16565;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_000600496.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3386816	3388486	.	-	.	ID=gene-PHA55_RS16570;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=PHA55_RS16570;old_locus_tag=PHA55_16565
NZ_CP116044.1	Protein Homology	CDS	3386816	3388486	.	-	0	ID=cds-WP_089590531.1;Parent=gene-PHA55_RS16570;Dbxref=Genbank:WP_089590531.1;Name=WP_089590531.1;Ontology_term=GO:0009234,GO:0070204;gbkey=CDS;gene=menD;go_function=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416767.1;locus_tag=PHA55_RS16570;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_089590531.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3388575	3389870	.	-	.	ID=gene-PHA55_RS16575;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=PHA55_RS16575;old_locus_tag=PHA55_16570
NZ_CP116044.1	Protein Homology	CDS	3388575	3389870	.	-	0	ID=cds-WP_001191399.1;Parent=gene-PHA55_RS16575;Dbxref=Genbank:WP_001191399.1;Name=WP_001191399.1;Ontology_term=GO:0008909;gbkey=CDS;gene=menF;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416768.4;locus_tag=PHA55_RS16575;product=isochorismate synthase MenF;protein_id=WP_001191399.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3389949	3390254	.	-	.	ID=gene-PHA55_RS16580;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=PHA55_RS16580;old_locus_tag=PHA55_16575
NZ_CP116044.1	Protein Homology	CDS	3389949	3390254	.	-	0	ID=cds-WP_000070621.1;Parent=gene-PHA55_RS16580;Dbxref=Genbank:WP_000070621.1;Name=WP_000070621.1;gbkey=CDS;gene=elaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311181.1;locus_tag=PHA55_RS16580;product=stress response protein ElaB;protein_id=WP_000070621.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3390309	3390770	.	-	.	ID=gene-PHA55_RS16585;Name=elaA;gbkey=Gene;gene=elaA;gene_biotype=protein_coding;locus_tag=PHA55_RS16585;old_locus_tag=PHA55_16580
NZ_CP116044.1	Protein Homology	CDS	3390309	3390770	.	-	0	ID=cds-WP_000574091.1;Parent=gene-PHA55_RS16585;Dbxref=Genbank:WP_000574091.1;Name=WP_000574091.1;gbkey=CDS;gene=elaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416770.1;locus_tag=PHA55_RS16585;product=GNAT family N-acetyltransferase;protein_id=WP_000574091.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3390835	3391752	.	+	.	ID=gene-PHA55_RS16590;Name=rbn;gbkey=Gene;gene=rbn;gene_biotype=protein_coding;locus_tag=PHA55_RS16590;old_locus_tag=PHA55_16585
NZ_CP116044.1	Protein Homology	CDS	3390835	3391752	.	+	0	ID=cds-WP_001300687.1;Parent=gene-PHA55_RS16590;Dbxref=Genbank:WP_001300687.1;Name=WP_001300687.1;Ontology_term=GO:0042779,GO:0016891;gbkey=CDS;gene=rbn;go_function=endoribonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=tRNA 3'-trailer cleavage|0042779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416771.4;locus_tag=PHA55_RS16590;product=ribonuclease BN;protein_id=WP_001300687.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	3391940	3393159	.	+	.	ID=gene-PHA55_RS16595;Name=elaD;gbkey=Gene;gene=elaD;gene_biotype=pseudogene;locus_tag=PHA55_RS16595;old_locus_tag=PHA55_16590;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	3391940	3393159	.	+	0	ID=cds-PHA55_RS16595;Parent=gene-PHA55_RS16595;Note=frameshifted%3B internal stop;gbkey=CDS;gene=elaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416772.1;locus_tag=PHA55_RS16595;product=deubiquitinase ElaD;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	3393548	3394177	.	+	.	ID=gene-PHA55_RS16600;Name=PHA55_RS16600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS16600;old_locus_tag=PHA55_16595;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	3393548	3394177	.	+	0	ID=cds-PHA55_RS16600;Parent=gene-PHA55_RS16600;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416774.2;locus_tag=PHA55_RS16600;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	3394280	3394783	.	+	.	ID=gene-PHA55_RS16605;Name=yfbM;gbkey=Gene;gene=yfbM;gene_biotype=protein_coding;locus_tag=PHA55_RS16605;old_locus_tag=PHA55_16600
NZ_CP116044.1	Protein Homology	CDS	3394280	3394783	.	+	0	ID=cds-WP_000525365.1;Parent=gene-PHA55_RS16605;Dbxref=Genbank:WP_000525365.1;Name=WP_000525365.1;gbkey=CDS;gene=yfbM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311186.1;locus_tag=PHA55_RS16605;product=YfbM family protein;protein_id=WP_000525365.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3394850	3396307	.	-	.	ID=gene-PHA55_RS16610;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=PHA55_RS16610;old_locus_tag=PHA55_16605
NZ_CP116044.1	Protein Homology	CDS	3394850	3396307	.	-	0	ID=cds-WP_000156701.1;Parent=gene-PHA55_RS16610;Dbxref=Genbank:WP_000156701.1;Name=WP_000156701.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416779.2;locus_tag=PHA55_RS16610;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_000156701.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3396314	3397843	.	-	.	ID=gene-PHA55_RS16615;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=PHA55_RS16615;old_locus_tag=PHA55_16610
NZ_CP116044.1	Protein Homology	CDS	3396314	3397843	.	-	0	ID=cds-WP_000926441.1;Parent=gene-PHA55_RS16615;Dbxref=Genbank:WP_000926441.1;Name=WP_000926441.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=PHA55_RS16615;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_000926441.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3398007	3399848	.	-	.	ID=gene-PHA55_RS16620;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=PHA55_RS16620;old_locus_tag=PHA55_16615
NZ_CP116044.1	Protein Homology	CDS	3398007	3399848	.	-	0	ID=cds-WP_001056636.1;Parent=gene-PHA55_RS16620;Dbxref=Genbank:WP_001056636.1;Name=WP_001056636.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=PHA55_RS16620;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_001056636.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3399845	3400147	.	-	.	ID=gene-PHA55_RS16625;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=PHA55_RS16625;old_locus_tag=PHA55_16620
NZ_CP116044.1	Protein Homology	CDS	3399845	3400147	.	-	0	ID=cds-WP_000612644.1;Parent=gene-PHA55_RS16625;Dbxref=Genbank:WP_000612644.1;Name=WP_000612644.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=PHA55_RS16625;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_000612644.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3400144	3400698	.	-	.	ID=gene-PHA55_RS16630;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=PHA55_RS16630;old_locus_tag=PHA55_16625
NZ_CP116044.1	Protein Homology	CDS	3400144	3400698	.	-	0	ID=cds-WP_000393511.1;Parent=gene-PHA55_RS16630;Dbxref=Genbank:WP_000393511.1;Name=WP_000393511.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774950.1;locus_tag=PHA55_RS16630;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_000393511.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3400710	3401252	.	-	.	ID=gene-PHA55_RS16635;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=PHA55_RS16635;old_locus_tag=PHA55_16630
NZ_CP116044.1	Protein Homology	CDS	3400710	3401252	.	-	0	ID=cds-WP_000172749.1;Parent=gene-PHA55_RS16635;Dbxref=Genbank:WP_000172749.1;Name=WP_000172749.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=PHA55_RS16635;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_000172749.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3401267	3402244	.	-	.	ID=gene-PHA55_RS16640;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=PHA55_RS16640;old_locus_tag=PHA55_16635
NZ_CP116044.1	Protein Homology	CDS	3401267	3402244	.	-	0	ID=cds-WP_000118507.1;Parent=gene-PHA55_RS16640;Dbxref=Genbank:WP_000118507.1;Name=WP_000118507.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=PHA55_RS16640;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_000118507.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3402241	3404967	.	-	.	ID=gene-PHA55_RS16645;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=PHA55_RS16645;old_locus_tag=PHA55_16640
NZ_CP116044.1	Protein Homology	CDS	3402241	3404967	.	-	0	ID=cds-WP_271287467.1;Parent=gene-PHA55_RS16645;Dbxref=Genbank:WP_271287467.1;Name=WP_271287467.1;Ontology_term=GO:0006120,GO:0050136;gbkey=CDS;gene=nuoG;go_function=NADH dehydrogenase (quinone) activity|0050136||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311194.2;locus_tag=PHA55_RS16645;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_271287467.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3405020	3406357	.	-	.	ID=gene-PHA55_RS16650;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=PHA55_RS16650;old_locus_tag=PHA55_16645
NZ_CP116044.1	Protein Homology	CDS	3405020	3406357	.	-	0	ID=cds-WP_000789502.1;Parent=gene-PHA55_RS16650;Dbxref=Genbank:WP_000789502.1;Name=WP_000789502.1;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311195.1;locus_tag=PHA55_RS16650;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_000789502.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3406354	3406854	.	-	.	ID=gene-PHA55_RS16655;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=PHA55_RS16655;old_locus_tag=PHA55_16650
NZ_CP116044.1	Protein Homology	CDS	3406354	3406854	.	-	0	ID=cds-WP_000545042.1;Parent=gene-PHA55_RS16655;Dbxref=Genbank:WP_000545042.1;Name=WP_000545042.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416788.1;locus_tag=PHA55_RS16655;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_000545042.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3406857	3408659	.	-	.	ID=gene-PHA55_RS16660;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=PHA55_RS16660;old_locus_tag=PHA55_16655
NZ_CP116044.1	Protein Homology	CDS	3406857	3408659	.	-	0	ID=cds-WP_073508578.1;Parent=gene-PHA55_RS16660;Dbxref=Genbank:WP_073508578.1;Name=WP_073508578.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH dehydrogenase (quinone) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708168.1;locus_tag=PHA55_RS16660;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_073508578.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3408753	3409415	.	-	.	ID=gene-PHA55_RS16665;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=PHA55_RS16665;old_locus_tag=PHA55_16660
NZ_CP116044.1	Protein Homology	CDS	3408753	3409415	.	-	0	ID=cds-WP_000386733.1;Parent=gene-PHA55_RS16665;Dbxref=Genbank:WP_000386733.1;Name=WP_000386733.1;gbkey=CDS;gene=nuoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311198.1;locus_tag=PHA55_RS16665;product=NADH-quinone oxidoreductase subunit NuoB;protein_id=WP_000386733.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3409431	3409874	.	-	.	ID=gene-PHA55_RS16670;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=PHA55_RS16670;old_locus_tag=PHA55_16665
NZ_CP116044.1	Protein Homology	CDS	3409431	3409874	.	-	0	ID=cds-WP_000062997.1;Parent=gene-PHA55_RS16670;Dbxref=Genbank:WP_000062997.1;Name=WP_000062997.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708170.1;locus_tag=PHA55_RS16670;product=NADH-quinone oxidoreductase subunit NuoA;protein_id=WP_000062997.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3410505	3411443	.	-	.	ID=gene-PHA55_RS16675;Name=lrhA;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;locus_tag=PHA55_RS16675;old_locus_tag=PHA55_16670
NZ_CP116044.1	Protein Homology	CDS	3410505	3411443	.	-	0	ID=cds-WP_000622286.1;Parent=gene-PHA55_RS16675;Dbxref=Genbank:WP_000622286.1;Name=WP_000622286.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lrhA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311200.1;locus_tag=PHA55_RS16675;product=transcriptional regulator LrhA;protein_id=WP_000622286.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3412363	3413580	.	+	.	ID=gene-PHA55_RS16680;Name=alaA;gbkey=Gene;gene=alaA;gene_biotype=protein_coding;locus_tag=PHA55_RS16680;old_locus_tag=PHA55_16675
NZ_CP116044.1	Protein Homology	CDS	3412363	3413580	.	+	0	ID=cds-WP_000074527.1;Parent=gene-PHA55_RS16680;Dbxref=Genbank:WP_000074527.1;Name=WP_000074527.1;gbkey=CDS;gene=alaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416793.1;locus_tag=PHA55_RS16680;product=alanine transaminase AlaA;protein_id=WP_000074527.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3413664	3414263	.	+	.	ID=gene-PHA55_RS16685;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=PHA55_RS16685;old_locus_tag=PHA55_16680
NZ_CP116044.1	Protein Homology	CDS	3413664	3414263	.	+	0	ID=cds-WP_000813847.1;Parent=gene-PHA55_RS16685;Dbxref=Genbank:WP_000813847.1;Name=WP_000813847.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311202.1;locus_tag=PHA55_RS16685;product=5'-deoxynucleotidase;protein_id=WP_000813847.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3414322	3416154	.	-	.	ID=gene-PHA55_RS16690;Name=yfbS;gbkey=Gene;gene=yfbS;gene_biotype=protein_coding;locus_tag=PHA55_RS16690;old_locus_tag=PHA55_16685
NZ_CP116044.1	Protein Homology	CDS	3414322	3416154	.	-	0	ID=cds-WP_001012899.1;Parent=gene-PHA55_RS16690;Dbxref=Genbank:WP_001012899.1;Name=WP_001012899.1;gbkey=CDS;gene=yfbS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311203.1;locus_tag=PHA55_RS16690;product=SLC13 family permease;protein_id=WP_001012899.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3416241	3416891	.	-	.	ID=gene-PHA55_RS16695;Name=hxpA;gbkey=Gene;gene=hxpA;gene_biotype=protein_coding;locus_tag=PHA55_RS16695;old_locus_tag=PHA55_16690
NZ_CP116044.1	Protein Homology	CDS	3416241	3416891	.	-	0	ID=cds-WP_001203410.1;Parent=gene-PHA55_RS16695;Dbxref=Genbank:WP_001203410.1;Name=WP_001203410.1;gbkey=CDS;gene=hxpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311204.1;locus_tag=PHA55_RS16695;product=hexitol phosphatase HxpA;protein_id=WP_001203410.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3416902	3417396	.	-	.	ID=gene-PHA55_RS16700;Name=yfbU;gbkey=Gene;gene=yfbU;gene_biotype=protein_coding;locus_tag=PHA55_RS16700;old_locus_tag=PHA55_16695
NZ_CP116044.1	Protein Homology	CDS	3416902	3417396	.	-	0	ID=cds-WP_000426124.1;Parent=gene-PHA55_RS16700;Dbxref=Genbank:WP_000426124.1;Name=WP_000426124.1;gbkey=CDS;gene=yfbU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371080.1;locus_tag=PHA55_RS16700;product=YfbU family protein;protein_id=WP_000426124.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3417479	3417934	.	-	.	ID=gene-PHA55_RS16705;Name=yfbV;gbkey=Gene;gene=yfbV;gene_biotype=protein_coding;locus_tag=PHA55_RS16705;old_locus_tag=PHA55_16700
NZ_CP116044.1	Protein Homology	CDS	3417479	3417934	.	-	0	ID=cds-WP_000106627.1;Parent=gene-PHA55_RS16705;Dbxref=Genbank:WP_000106627.1;Name=WP_000106627.1;gbkey=CDS;gene=yfbV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129545.1;locus_tag=PHA55_RS16705;product=terminus macrodomain insulation protein YfbV;protein_id=WP_000106627.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3418272	3419474	.	+	.	ID=gene-PHA55_RS16710;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=PHA55_RS16710;old_locus_tag=PHA55_16705
NZ_CP116044.1	Protein Homology	CDS	3418272	3419474	.	+	0	ID=cds-WP_000095707.1;Parent=gene-PHA55_RS16710;Dbxref=Genbank:WP_000095707.1;Name=WP_000095707.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=PHA55_RS16710;product=acetate kinase;protein_id=WP_000095707.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3419549	3421693	.	+	.	ID=gene-PHA55_RS16715;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=PHA55_RS16715;old_locus_tag=PHA55_16710
NZ_CP116044.1	Protein Homology	CDS	3419549	3421693	.	+	0	ID=cds-WP_000086722.1;Parent=gene-PHA55_RS16715;Dbxref=Genbank:WP_000086722.1;Name=WP_000086722.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416800.1;locus_tag=PHA55_RS16715;product=phosphate acetyltransferase;protein_id=WP_000086722.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3421883	3423403	.	+	.	ID=gene-PHA55_RS16720;Name=yfcC;gbkey=Gene;gene=yfcC;gene_biotype=protein_coding;locus_tag=PHA55_RS16720;old_locus_tag=PHA55_16715
NZ_CP116044.1	Protein Homology	CDS	3421883	3423403	.	+	0	ID=cds-WP_001274501.1;Parent=gene-PHA55_RS16720;Dbxref=Genbank:WP_001274501.1;Name=WP_001274501.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yfcC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416801.2;locus_tag=PHA55_RS16720;product=putative basic amino acid antiporter YfcC;protein_id=WP_001274501.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3423436	3423978	.	-	.	ID=gene-PHA55_RS16725;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=PHA55_RS16725;old_locus_tag=PHA55_16720
NZ_CP116044.1	Protein Homology	CDS	3423436	3423978	.	-	0	ID=cds-WP_000437935.1;Parent=gene-PHA55_RS16725;Dbxref=Genbank:WP_000437935.1;Name=WP_000437935.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311210.1;locus_tag=PHA55_RS16725;product=NUDIX hydrolase YfcD;protein_id=WP_000437935.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3424036	3424587	.	-	.	ID=gene-PHA55_RS16730;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=PHA55_RS16730;old_locus_tag=PHA55_16725
NZ_CP116044.1	Protein Homology	CDS	3424036	3424587	.	-	0	ID=cds-WP_000772452.1;Parent=gene-PHA55_RS16730;Dbxref=Genbank:WP_000772452.1;Name=WP_000772452.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311211.4;locus_tag=PHA55_RS16730;product=phosphodiesterase;protein_id=WP_000772452.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3424643	3425287	.	-	.	ID=gene-PHA55_RS16735;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=PHA55_RS16735;old_locus_tag=PHA55_16730
NZ_CP116044.1	Protein Homology	CDS	3424643	3425287	.	-	0	ID=cds-WP_000042440.1;Parent=gene-PHA55_RS16735;Dbxref=Genbank:WP_000042440.1;Name=WP_000042440.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708183.1;locus_tag=PHA55_RS16735;product=glutathione transferase;protein_id=WP_000042440.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3425423	3426070	.	+	.	ID=gene-PHA55_RS16740;Name=yfcG;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;locus_tag=PHA55_RS16740;old_locus_tag=PHA55_16735
NZ_CP116044.1	Protein Homology	CDS	3425423	3426070	.	+	0	ID=cds-WP_000566471.1;Parent=gene-PHA55_RS16740;Dbxref=Genbank:WP_000566471.1;Name=WP_000566471.1;gbkey=CDS;gene=yfcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416805.1;locus_tag=PHA55_RS16740;product=GSH-dependent disulfide bond oxidoreductase;protein_id=WP_000566471.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3426127	3426489	.	+	.	ID=gene-PHA55_RS16745;Name=folX;gbkey=Gene;gene=folX;gene_biotype=protein_coding;locus_tag=PHA55_RS16745;old_locus_tag=PHA55_16740
NZ_CP116044.1	Protein Homology	CDS	3426127	3426489	.	+	0	ID=cds-WP_000068457.1;Parent=gene-PHA55_RS16745;Dbxref=Genbank:WP_000068457.1;Name=WP_000068457.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folX;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311214.1;locus_tag=PHA55_RS16745;product=dihydroneopterin triphosphate 2'-epimerase;protein_id=WP_000068457.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3426510	3427403	.	+	.	ID=gene-PHA55_RS16750;Name=yfcH;gbkey=Gene;gene=yfcH;gene_biotype=protein_coding;locus_tag=PHA55_RS16750;old_locus_tag=PHA55_16745
NZ_CP116044.1	Protein Homology	CDS	3426510	3427403	.	+	0	ID=cds-WP_001028339.1;Parent=gene-PHA55_RS16750;Dbxref=Genbank:WP_001028339.1;Name=WP_001028339.1;Ontology_term=GO:0003824;gbkey=CDS;gene=yfcH;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416807.1;locus_tag=PHA55_RS16750;product=TIGR01777 family oxidoreductase;protein_id=WP_001028339.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3427451	3428353	.	-	.	ID=gene-PHA55_RS16755;Name=rpnB;gbkey=Gene;gene=rpnB;gene_biotype=protein_coding;locus_tag=PHA55_RS16755;old_locus_tag=PHA55_16750
NZ_CP116044.1	Protein Homology	CDS	3427451	3428353	.	-	0	ID=cds-WP_000156113.1;Parent=gene-PHA55_RS16755;Dbxref=Genbank:WP_000156113.1;Name=WP_000156113.1;gbkey=CDS;gene=rpnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416808.1;locus_tag=PHA55_RS16755;product=recombination-promoting nuclease RpnB;protein_id=WP_000156113.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3428550	3429323	.	-	.	ID=gene-PHA55_RS16760;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=PHA55_RS16760;old_locus_tag=PHA55_16755
NZ_CP116044.1	Protein Homology	CDS	3428550	3429323	.	-	0	ID=cds-WP_001293612.1;Parent=gene-PHA55_RS16760;Dbxref=Genbank:WP_001293612.1;Name=WP_001293612.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311217.1;locus_tag=PHA55_RS16760;product=histidine ABC transporter ATP-binding protein HisP;protein_id=WP_001293612.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3429331	3430047	.	-	.	ID=gene-PHA55_RS16765;Name=hisM;gbkey=Gene;gene=hisM;gene_biotype=protein_coding;locus_tag=PHA55_RS16765;old_locus_tag=PHA55_16760
NZ_CP116044.1	Protein Homology	CDS	3429331	3430047	.	-	0	ID=cds-WP_000569958.1;Parent=gene-PHA55_RS16765;Dbxref=Genbank:WP_000569958.1;Name=WP_000569958.1;gbkey=CDS;gene=hisM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311218.1;locus_tag=PHA55_RS16765;product=ABC transporter permease;protein_id=WP_000569958.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3430044	3430730	.	-	.	ID=gene-PHA55_RS16770;Name=hisQ;gbkey=Gene;gene=hisQ;gene_biotype=protein_coding;locus_tag=PHA55_RS16770;old_locus_tag=PHA55_16765
NZ_CP116044.1	Protein Homology	CDS	3430044	3430730	.	-	0	ID=cds-WP_000965518.1;Parent=gene-PHA55_RS16770;Dbxref=Genbank:WP_000965518.1;Name=WP_000965518.1;gbkey=CDS;gene=hisQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124147.1;locus_tag=PHA55_RS16770;product=histidine ABC transporter permease HisQ;protein_id=WP_000965518.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3430820	3431602	.	-	.	ID=gene-PHA55_RS16775;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=PHA55_RS16775;old_locus_tag=PHA55_16770
NZ_CP116044.1	Protein Homology	CDS	3430820	3431602	.	-	0	ID=cds-WP_000737621.1;Parent=gene-PHA55_RS16775;Dbxref=Genbank:WP_000737621.1;Name=WP_000737621.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311220.1;locus_tag=PHA55_RS16775;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=WP_000737621.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3431823	3432605	.	-	.	ID=gene-PHA55_RS16780;Name=argT;gbkey=Gene;gene=argT;gene_biotype=protein_coding;locus_tag=PHA55_RS16780;old_locus_tag=PHA55_16775
NZ_CP116044.1	Protein Homology	CDS	3431823	3432605	.	-	0	ID=cds-WP_000748261.1;Parent=gene-PHA55_RS16780;Dbxref=Genbank:WP_000748261.1;Name=WP_000748261.1;gbkey=CDS;gene=argT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311221.1;locus_tag=PHA55_RS16780;product=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;protein_id=WP_000748261.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3432871	3433440	.	-	.	ID=gene-PHA55_RS16785;Name=ubiX;gbkey=Gene;gene=ubiX;gene_biotype=protein_coding;locus_tag=PHA55_RS16785;old_locus_tag=PHA55_16780
NZ_CP116044.1	Protein Homology	CDS	3432871	3433440	.	-	0	ID=cds-WP_000825700.1;Parent=gene-PHA55_RS16785;Dbxref=Genbank:WP_000825700.1;Name=WP_000825700.1;gbkey=CDS;gene=ubiX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120208.1;locus_tag=PHA55_RS16785;product=flavin prenyltransferase UbiX;protein_id=WP_000825700.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3433535	3435052	.	-	.	ID=gene-PHA55_RS16790;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=PHA55_RS16790;old_locus_tag=PHA55_16785
NZ_CP116044.1	Protein Homology	CDS	3433535	3435052	.	-	0	ID=cds-WP_000334218.1;Parent=gene-PHA55_RS16790;Dbxref=Genbank:WP_000334218.1;Name=WP_000334218.1;Ontology_term=GO:0009152,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=PHA55_RS16790;product=amidophosphoribosyltransferase;protein_id=WP_000334218.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3435089	3435577	.	-	.	ID=gene-PHA55_RS16795;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=PHA55_RS16795;old_locus_tag=PHA55_16790
NZ_CP116044.1	Protein Homology	CDS	3435089	3435577	.	-	0	ID=cds-WP_000262113.1;Parent=gene-PHA55_RS16795;Dbxref=Genbank:WP_000262113.1;Name=WP_000262113.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311224.1;locus_tag=PHA55_RS16795;product=colicin V production protein;protein_id=WP_000262113.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3435836	3436498	.	-	.	ID=gene-PHA55_RS16800;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=PHA55_RS16800;old_locus_tag=PHA55_16795
NZ_CP116044.1	Protein Homology	CDS	3435836	3436498	.	-	0	ID=cds-WP_000157015.1;Parent=gene-PHA55_RS16800;Dbxref=Genbank:WP_000157015.1;Name=WP_000157015.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416817.2;locus_tag=PHA55_RS16800;product=cell division protein DedD;protein_id=WP_000157015.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3436488	3437756	.	-	.	ID=gene-PHA55_RS16805;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=PHA55_RS16805;old_locus_tag=PHA55_16800
NZ_CP116044.1	Protein Homology	CDS	3436488	3437756	.	-	0	ID=cds-WP_000584575.1;Parent=gene-PHA55_RS16805;Dbxref=Genbank:WP_000584575.1;Name=WP_000584575.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416818.1;locus_tag=PHA55_RS16805;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_000584575.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3437826	3438740	.	-	.	ID=gene-PHA55_RS16810;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=PHA55_RS16810;old_locus_tag=PHA55_16805
NZ_CP116044.1	Protein Homology	CDS	3437826	3438740	.	-	0	ID=cds-WP_000118404.1;Parent=gene-PHA55_RS16810;Dbxref=Genbank:WP_000118404.1;Name=WP_000118404.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311227.1;locus_tag=PHA55_RS16810;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_000118404.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3438896	3439555	.	-	.	ID=gene-PHA55_RS16815;Name=dedA;gbkey=Gene;gene=dedA;gene_biotype=protein_coding;locus_tag=PHA55_RS16815;old_locus_tag=PHA55_16810
NZ_CP116044.1	Protein Homology	CDS	3438896	3439555	.	-	0	ID=cds-WP_000364331.1;Parent=gene-PHA55_RS16815;Dbxref=Genbank:WP_000364331.1;Name=WP_000364331.1;gbkey=CDS;gene=dedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311228.1;locus_tag=PHA55_RS16815;product=DedA family protein;protein_id=WP_000364331.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3439638	3440450	.	-	.	ID=gene-PHA55_RS16820;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=PHA55_RS16820;old_locus_tag=PHA55_16815
NZ_CP116044.1	Protein Homology	CDS	3439638	3440450	.	-	0	ID=cds-WP_001283590.1;Parent=gene-PHA55_RS16820;Dbxref=Genbank:WP_001283590.1;Name=WP_001283590.1;Ontology_term=GO:0006400,GO:0009982;gbkey=CDS;gene=truA;go_function=pseudouridine synthase activity|0009982||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311229.1;locus_tag=PHA55_RS16820;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_001283590.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3440450	3441463	.	-	.	ID=gene-PHA55_RS16825;Name=usg;gbkey=Gene;gene=usg;gene_biotype=protein_coding;locus_tag=PHA55_RS16825;old_locus_tag=PHA55_16820
NZ_CP116044.1	Protein Homology	CDS	3440450	3441463	.	-	0	ID=cds-WP_001289162.1;Parent=gene-PHA55_RS16825;Dbxref=Genbank:WP_001289162.1;Name=WP_001289162.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;gene=usg;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416822.1;locus_tag=PHA55_RS16825;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_001289162.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3441529	3442665	.	-	.	ID=gene-PHA55_RS16830;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=PHA55_RS16830;old_locus_tag=PHA55_16825
NZ_CP116044.1	Protein Homology	CDS	3441529	3442665	.	-	0	ID=cds-WP_000699121.1;Parent=gene-PHA55_RS16830;Dbxref=Genbank:WP_000699121.1;Name=WP_000699121.1;Ontology_term=GO:0008615,GO:0033711,GO:0046983,GO:0051287;gbkey=CDS;gene=pdxB;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708202.1;locus_tag=PHA55_RS16830;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=WP_000699121.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3442764	3443759	.	+	.	ID=gene-PHA55_RS16835;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;locus_tag=PHA55_RS16835;old_locus_tag=PHA55_16830
NZ_CP116044.1	Protein Homology	CDS	3442764	3443759	.	+	0	ID=cds-WP_000615813.1;Parent=gene-PHA55_RS16835;Dbxref=Genbank:WP_000615813.1;Name=WP_000615813.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=flk;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708203.1;locus_tag=PHA55_RS16835;product=flagella biosynthesis regulator Flk;protein_id=WP_000615813.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3443756	3444934	.	-	.	ID=gene-PHA55_RS16840;Name=yfcJ;gbkey=Gene;gene=yfcJ;gene_biotype=protein_coding;locus_tag=PHA55_RS16840;old_locus_tag=PHA55_16835
NZ_CP116044.1	Protein Homology	CDS	3443756	3444934	.	-	0	ID=cds-WP_000127762.1;Parent=gene-PHA55_RS16840;Dbxref=Genbank:WP_000127762.1;Name=WP_000127762.1;gbkey=CDS;gene=yfcJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311233.1;locus_tag=PHA55_RS16840;product=MFS transporter;protein_id=WP_000127762.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3445245	3446465	.	-	.	ID=gene-PHA55_RS16845;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=PHA55_RS16845;old_locus_tag=PHA55_16840
NZ_CP116044.1	Protein Homology	CDS	3445245	3446465	.	-	0	ID=cds-WP_000817178.1;Parent=gene-PHA55_RS16845;Dbxref=Genbank:WP_000817178.1;Name=WP_000817178.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416826.1;locus_tag=PHA55_RS16845;product=beta-ketoacyl-ACP synthase I;protein_id=WP_000817178.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3446624	3448630	.	+	.	ID=gene-PHA55_RS16850;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=PHA55_RS16850;old_locus_tag=PHA55_16845
NZ_CP116044.1	Protein Homology	CDS	3446624	3448630	.	+	0	ID=cds-WP_000683799.1;Parent=gene-PHA55_RS16850;Dbxref=Genbank:WP_000683799.1;Name=WP_000683799.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416827.4;locus_tag=PHA55_RS16850;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_000683799.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3448751	3449029	.	-	.	ID=gene-PHA55_RS16855;Name=yfcL;gbkey=Gene;gene=yfcL;gene_biotype=protein_coding;locus_tag=PHA55_RS16855;old_locus_tag=PHA55_16850
NZ_CP116044.1	Protein Homology	CDS	3448751	3449029	.	-	0	ID=cds-WP_000559764.1;Parent=gene-PHA55_RS16855;Dbxref=Genbank:WP_000559764.1;Name=WP_000559764.1;gbkey=CDS;gene=yfcL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311236.1;locus_tag=PHA55_RS16855;product=YfcL family protein;protein_id=WP_000559764.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3449063	3449611	.	-	.	ID=gene-PHA55_RS16860;Name=epmC;gbkey=Gene;gene=epmC;gene_biotype=protein_coding;locus_tag=PHA55_RS16860;old_locus_tag=PHA55_16855
NZ_CP116044.1	Protein Homology	CDS	3449063	3449611	.	-	0	ID=cds-WP_001089235.1;Parent=gene-PHA55_RS16860;Dbxref=Genbank:WP_001089235.1;Name=WP_001089235.1;gbkey=CDS;gene=epmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416829.1;locus_tag=PHA55_RS16860;product=elongation factor P hydroxylase;protein_id=WP_001089235.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3449611	3450420	.	-	.	ID=gene-PHA55_RS16865;Name=yfcA;gbkey=Gene;gene=yfcA;gene_biotype=protein_coding;locus_tag=PHA55_RS16865;old_locus_tag=PHA55_16860
NZ_CP116044.1	Protein Homology	CDS	3449611	3450420	.	-	0	ID=cds-WP_000447359.1;Parent=gene-PHA55_RS16865;Dbxref=Genbank:WP_000447359.1;Name=WP_000447359.1;gbkey=CDS;gene=yfcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311238.1;locus_tag=PHA55_RS16865;product=sulfite exporter TauE/SafE family protein;protein_id=WP_000447359.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3450420	3451244	.	-	.	ID=gene-PHA55_RS16870;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=PHA55_RS16870;old_locus_tag=PHA55_16865
NZ_CP116044.1	Protein Homology	CDS	3450420	3451244	.	-	0	ID=cds-WP_001043821.1;Parent=gene-PHA55_RS16870;Dbxref=Genbank:WP_001043821.1;Name=WP_001043821.1;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416831.1;locus_tag=PHA55_RS16870;product=penicillin-insensitive murein endopeptidase;protein_id=WP_001043821.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3451248	3452333	.	-	.	ID=gene-PHA55_RS16875;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=PHA55_RS16875;old_locus_tag=PHA55_16870
NZ_CP116044.1	Protein Homology	CDS	3451248	3452333	.	-	0	ID=cds-WP_000918470.1;Parent=gene-PHA55_RS16875;Dbxref=Genbank:WP_000918470.1;Name=WP_000918470.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=PHA55_RS16875;product=chorismate synthase;protein_id=WP_000918470.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3452368	3453300	.	-	.	ID=gene-PHA55_RS16880;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=PHA55_RS16880;old_locus_tag=PHA55_16875
NZ_CP116044.1	Protein Homology	CDS	3452368	3453300	.	-	0	ID=cds-WP_001295704.1;Parent=gene-PHA55_RS16880;Dbxref=Genbank:WP_001295704.1;Name=WP_001295704.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=PHA55_RS16880;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_001295704.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3453466	3454017	.	+	.	ID=gene-PHA55_RS16885;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=PHA55_RS16885;old_locus_tag=PHA55_16880
NZ_CP116044.1	Protein Homology	CDS	3453466	3454017	.	+	0	ID=cds-WP_000730816.1;Parent=gene-PHA55_RS16885;Dbxref=Genbank:WP_000730816.1;Name=WP_000730816.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416834.1;locus_tag=PHA55_RS16885;product=endonuclease SmrB;protein_id=WP_000730816.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3454090	3454941	.	-	.	ID=gene-PHA55_RS16890;Name=PHA55_RS16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS16890;old_locus_tag=PHA55_16885
NZ_CP116044.1	Protein Homology	CDS	3454090	3454941	.	-	0	ID=cds-WP_001315753.1;Parent=gene-PHA55_RS16890;Dbxref=Genbank:WP_001315753.1;Name=WP_001315753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001721620.1;locus_tag=PHA55_RS16890;product=StfH/YfcO family fimbrial adhesin;protein_id=WP_001315753.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3454943	3455482	.	-	.	ID=gene-PHA55_RS16895;Name=PHA55_RS16895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS16895;old_locus_tag=PHA55_16890
NZ_CP116044.1	Protein Homology	CDS	3454943	3455482	.	-	0	ID=cds-WP_000844750.1;Parent=gene-PHA55_RS16895;Dbxref=Genbank:WP_000844750.1;Name=WP_000844750.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416836.1;locus_tag=PHA55_RS16895;product=fimbrial protein;protein_id=WP_000844750.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3455479	3455967	.	-	.	ID=gene-PHA55_RS16900;Name=PHA55_RS16900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS16900;old_locus_tag=PHA55_16895
NZ_CP116044.1	Protein Homology	CDS	3455479	3455967	.	-	0	ID=cds-WP_000714139.1;Parent=gene-PHA55_RS16900;Dbxref=Genbank:WP_000714139.1;Name=WP_000714139.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001709066.1;locus_tag=PHA55_RS16900;product=fimbrial protein;protein_id=WP_000714139.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3455964	3456473	.	-	.	ID=gene-PHA55_RS16905;Name=PHA55_RS16905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS16905;old_locus_tag=PHA55_16900
NZ_CP116044.1	Protein Homology	CDS	3455964	3456473	.	-	0	ID=cds-WP_000018471.1;Parent=gene-PHA55_RS16905;Dbxref=Genbank:WP_000018471.1;Name=WP_000018471.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001733155.1;locus_tag=PHA55_RS16905;product=fimbrial protein;protein_id=WP_000018471.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3456489	3457241	.	-	.	ID=gene-PHA55_RS16910;Name=PHA55_RS16910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS16910;old_locus_tag=PHA55_16905
NZ_CP116044.1	Protein Homology	CDS	3456489	3457241	.	-	0	ID=cds-WP_000482748.1;Parent=gene-PHA55_RS16910;Dbxref=Genbank:WP_000482748.1;Name=WP_000482748.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000482750.1;locus_tag=PHA55_RS16910;product=fimbria/pilus periplasmic chaperone;protein_id=WP_000482748.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3457261	3459903	.	-	.	ID=gene-PHA55_RS16915;Name=yfcU;gbkey=Gene;gene=yfcU;gene_biotype=protein_coding;locus_tag=PHA55_RS16915;old_locus_tag=PHA55_16910
NZ_CP116044.1	Protein Homology	CDS	3457261	3459903	.	-	0	ID=cds-WP_001315754.1;Parent=gene-PHA55_RS16915;Dbxref=Genbank:WP_001315754.1;Name=WP_001315754.1;gbkey=CDS;gene=yfcU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112832.1;locus_tag=PHA55_RS16915;product=fimbrial usher protein YfcU;protein_id=WP_001315754.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3459985	3460548	.	-	.	ID=gene-PHA55_RS16920;Name=yfcV;gbkey=Gene;gene=yfcV;gene_biotype=protein_coding;locus_tag=PHA55_RS16920;old_locus_tag=PHA55_16915
NZ_CP116044.1	Protein Homology	CDS	3459985	3460548	.	-	0	ID=cds-WP_000033328.1;Parent=gene-PHA55_RS16920;Dbxref=Genbank:WP_000033328.1;Name=WP_000033328.1;gbkey=CDS;gene=yfcV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708219.1;locus_tag=PHA55_RS16920;product=fimbrial protein;protein_id=WP_000033328.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3461223	3461708	.	-	.	ID=gene-PHA55_RS16925;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=PHA55_RS16925;old_locus_tag=PHA55_16920
NZ_CP116044.1	Protein Homology	CDS	3461223	3461708	.	-	0	ID=cds-WP_001195819.1;Parent=gene-PHA55_RS16925;Dbxref=Genbank:WP_001195819.1;Name=WP_001195819.1;Ontology_term=GO:0000160,GO:0101006;gbkey=CDS;gene=sixA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416842.1;locus_tag=PHA55_RS16925;product=phosphohistidine phosphatase SixA;protein_id=WP_001195819.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3461911	3464055	.	-	.	ID=gene-PHA55_RS16930;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=PHA55_RS16930;old_locus_tag=PHA55_16925
NZ_CP116044.1	Protein Homology	CDS	3461911	3464055	.	-	0	ID=cds-WP_000426156.1;Parent=gene-PHA55_RS16930;Dbxref=Genbank:WP_000426156.1;Name=WP_000426156.1;Ontology_term=GO:0009062,GO:0003857,GO:0004300,GO:0008692;gbkey=CDS;gene=fadJ;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311251.1;locus_tag=PHA55_RS16930;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=WP_000426156.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3464055	3465365	.	-	.	ID=gene-PHA55_RS16935;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=PHA55_RS16935;old_locus_tag=PHA55_16930
NZ_CP116044.1	Protein Homology	CDS	3464055	3465365	.	-	0	ID=cds-WP_000531955.1;Parent=gene-PHA55_RS16935;Dbxref=Genbank:WP_000531955.1;Name=WP_000531955.1;Ontology_term=GO:0009062,GO:0003988;gbkey=CDS;gene=fadI;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416844.1;locus_tag=PHA55_RS16935;product=acetyl-CoA C-acyltransferase FadI;protein_id=WP_000531955.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3465545	3465829	.	-	.	ID=gene-PHA55_RS16940;Name=yfcZ;gbkey=Gene;gene=yfcZ;gene_biotype=protein_coding;locus_tag=PHA55_RS16940;old_locus_tag=PHA55_16935
NZ_CP116044.1	Protein Homology	CDS	3465545	3465829	.	-	0	ID=cds-WP_000030901.1;Parent=gene-PHA55_RS16940;Dbxref=Genbank:WP_000030901.1;Name=WP_000030901.1;gbkey=CDS;gene=yfcZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129756.1;locus_tag=PHA55_RS16940;product=YfcZ/YiiS family protein;protein_id=WP_000030901.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3466201	3467541	.	+	.	ID=gene-PHA55_RS16945;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=PHA55_RS16945;old_locus_tag=PHA55_16940
NZ_CP116044.1	Protein Homology	CDS	3466201	3467541	.	+	0	ID=cds-WP_001296861.1;Parent=gene-PHA55_RS16945;Dbxref=Genbank:WP_001296861.1;Name=WP_001296861.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708225.2;locus_tag=PHA55_RS16945;product=long-chain fatty acid transporter FadL;protein_id=WP_001296861.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3467909	3468967	.	+	.	ID=gene-PHA55_RS16950;Name=yfdF;gbkey=Gene;gene=yfdF;gene_biotype=protein_coding;locus_tag=PHA55_RS16950;old_locus_tag=PHA55_16945
NZ_CP116044.1	Protein Homology	CDS	3467909	3468967	.	+	0	ID=cds-WP_000937836.1;Parent=gene-PHA55_RS16950;Dbxref=Genbank:WP_000937836.1;Name=WP_000937836.1;gbkey=CDS;gene=yfdF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416847.1;locus_tag=PHA55_RS16950;product=protein YfdF;protein_id=WP_000937836.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3469149	3469904	.	-	.	ID=gene-PHA55_RS16955;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=PHA55_RS16955;old_locus_tag=PHA55_16950
NZ_CP116044.1	Protein Homology	CDS	3469149	3469904	.	-	0	ID=cds-WP_000776768.1;Parent=gene-PHA55_RS16955;Dbxref=Genbank:WP_000776768.1;Name=WP_000776768.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311256.1;locus_tag=PHA55_RS16955;product=phospholipid-binding lipoprotein MlaA;protein_id=WP_000776768.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3470198	3471130	.	+	.	ID=gene-PHA55_RS16960;Name=yfdC;gbkey=Gene;gene=yfdC;gene_biotype=protein_coding;locus_tag=PHA55_RS16960;old_locus_tag=PHA55_16955
NZ_CP116044.1	Protein Homology	CDS	3470198	3471130	.	+	0	ID=cds-WP_000368131.1;Parent=gene-PHA55_RS16960;Dbxref=Genbank:WP_000368131.1;Name=WP_000368131.1;gbkey=CDS;gene=yfdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311257.1;locus_tag=PHA55_RS16960;product=formate/nitrite transporter family protein;protein_id=WP_000368131.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3471206	3471280	.	+	.	ID=gene-PHA55_RS16965;Name=PHA55_RS16965;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS16965;old_locus_tag=PHA55_16960
NZ_CP116044.1	tRNAscan-SE	tRNA	3471206	3471280	.	+	.	ID=rna-PHA55_RS16965;Parent=gene-PHA55_RS16965;anticodon=(pos:3471239..3471241);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS16965;product=tRNA-Arg
NZ_CP116044.1	tRNAscan-SE	exon	3471206	3471280	.	+	.	ID=exon-PHA55_RS16965-1;Parent=rna-PHA55_RS16965;anticodon=(pos:3471239..3471241);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS16965;product=tRNA-Arg
NZ_CP116044.1	RefSeq	gene	3471722	3472969	.	-	.	ID=gene-PHA55_RS16970;Name=PHA55_RS16970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS16970;old_locus_tag=PHA55_16965
NZ_CP116044.1	Protein Homology	CDS	3471722	3472969	.	-	0	ID=cds-WP_001197023.1;Parent=gene-PHA55_RS16970;Dbxref=Genbank:WP_001197023.1;Name=WP_001197023.1;Ontology_term=GO:0008643,GO:0005351,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311268.1;locus_tag=PHA55_RS16970;product=oligosaccharide MFS transporter;protein_id=WP_001197023.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3473041	3473955	.	-	.	ID=gene-PHA55_RS16975;Name=PHA55_RS16975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS16975;old_locus_tag=PHA55_16970
NZ_CP116044.1	Protein Homology	CDS	3473041	3473955	.	-	0	ID=cds-WP_001274887.1;Parent=gene-PHA55_RS16975;Dbxref=Genbank:WP_001274887.1;Name=WP_001274887.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311269.1;locus_tag=PHA55_RS16975;product=aminoimidazole riboside kinase;protein_id=WP_001274887.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3474171	3475604	.	+	.	ID=gene-PHA55_RS16980;Name=cscA;gbkey=Gene;gene=cscA;gene_biotype=protein_coding;locus_tag=PHA55_RS16980;old_locus_tag=PHA55_16975
NZ_CP116044.1	Protein Homology	CDS	3474171	3475604	.	+	0	ID=cds-WP_097404917.1;Parent=gene-PHA55_RS16980;Dbxref=Genbank:WP_097404917.1;Name=WP_097404917.1;gbkey=CDS;gene=cscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311270.1;locus_tag=PHA55_RS16980;product=sucrose-6-phosphate hydrolase;protein_id=WP_097404917.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3475612	3476607	.	-	.	ID=gene-PHA55_RS16985;Name=PHA55_RS16985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS16985;old_locus_tag=PHA55_16980
NZ_CP116044.1	Protein Homology	CDS	3475612	3476607	.	-	0	ID=cds-WP_001344440.1;Parent=gene-PHA55_RS16985;Dbxref=Genbank:WP_001344440.1;Name=WP_001344440.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005088955.1;locus_tag=PHA55_RS16985;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_001344440.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	3476850	3477068	.	+	.	ID=gene-PHA55_RS16990;Name=PHA55_RS16990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS16990;old_locus_tag=PHA55_16985;partial=true;pseudo=true;start_range=.,3476850
NZ_CP116044.1	Protein Homology	CDS	3476850	3477068	.	+	0	ID=cds-PHA55_RS16990;Parent=gene-PHA55_RS16990;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416866.1;locus_tag=PHA55_RS16990;partial=true;product=D-serine transporter DsdX;pseudo=true;start_range=.,3476850;transl_table=11
NZ_CP116044.1	RefSeq	gene	3477086	3478414	.	+	.	ID=gene-PHA55_RS16995;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=PHA55_RS16995;old_locus_tag=PHA55_16990
NZ_CP116044.1	Protein Homology	CDS	3477086	3478414	.	+	0	ID=cds-WP_112844610.1;Parent=gene-PHA55_RS16995;Dbxref=Genbank:WP_112844610.1;Name=WP_112844610.1;Ontology_term=GO:0046416,GO:0008721,GO:0005737;gbkey=CDS;gene=dsdA;go_component=cytoplasm|0005737||IEA;go_function=D-serine ammonia-lyase activity|0008721||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311272.1;locus_tag=PHA55_RS16995;product=D-serine ammonia-lyase;protein_id=WP_112844610.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3478522	3480060	.	-	.	ID=gene-PHA55_RS17000;Name=emrY;gbkey=Gene;gene=emrY;gene_biotype=protein_coding;locus_tag=PHA55_RS17000;old_locus_tag=PHA55_16995
NZ_CP116044.1	Protein Homology	CDS	3478522	3480060	.	-	0	ID=cds-WP_001018714.1;Parent=gene-PHA55_RS17000;Dbxref=Genbank:WP_001018714.1;Name=WP_001018714.1;gbkey=CDS;gene=emrY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416868.1;locus_tag=PHA55_RS17000;product=multidrug efflux MFS transporter permease subunit EmrY;protein_id=WP_001018714.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3480060	3481223	.	-	.	ID=gene-PHA55_RS17005;Name=emrK;gbkey=Gene;gene=emrK;gene_biotype=protein_coding;locus_tag=PHA55_RS17005;old_locus_tag=PHA55_17000
NZ_CP116044.1	Protein Homology	CDS	3480060	3481223	.	-	0	ID=cds-WP_000435171.1;Parent=gene-PHA55_RS17005;Dbxref=Genbank:WP_000435171.1;Name=WP_000435171.1;gbkey=CDS;gene=emrK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416869.1;locus_tag=PHA55_RS17005;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrK;protein_id=WP_000435171.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3481638	3482252	.	+	.	ID=gene-PHA55_RS17010;Name=evgA;gbkey=Gene;gene=evgA;gene_biotype=protein_coding;locus_tag=PHA55_RS17010;old_locus_tag=PHA55_17005
NZ_CP116044.1	Protein Homology	CDS	3481638	3482252	.	+	0	ID=cds-WP_000991370.1;Parent=gene-PHA55_RS17010;Dbxref=Genbank:WP_000991370.1;Name=WP_000991370.1;gbkey=CDS;gene=evgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311275.1;locus_tag=PHA55_RS17010;product=acid-sensing system DNA-binding response regulator EvgA;protein_id=WP_000991370.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3482257	3485850	.	+	.	ID=gene-PHA55_RS17015;Name=evgS;gbkey=Gene;gene=evgS;gene_biotype=protein_coding;locus_tag=PHA55_RS17015;old_locus_tag=PHA55_17010
NZ_CP116044.1	Protein Homology	CDS	3482257	3485850	.	+	0	ID=cds-WP_001307321.1;Parent=gene-PHA55_RS17015;Dbxref=Genbank:WP_001307321.1;Name=WP_001307321.1;gbkey=CDS;gene=evgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708241.1;locus_tag=PHA55_RS17015;product=acid-sensing system histidine kinase EvgS;protein_id=WP_001307321.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3485906	3487051	.	-	.	ID=gene-PHA55_RS17020;Name=yfdE;gbkey=Gene;gene=yfdE;gene_biotype=protein_coding;locus_tag=PHA55_RS17020;old_locus_tag=PHA55_17015
NZ_CP116044.1	Protein Homology	CDS	3485906	3487051	.	-	0	ID=cds-WP_001296867.1;Parent=gene-PHA55_RS17020;Dbxref=Genbank:WP_001296867.1;Name=WP_001296867.1;gbkey=CDS;gene=yfdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416872.4;locus_tag=PHA55_RS17020;product=CoA:oxalate CoA-transferase;protein_id=WP_001296867.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3487125	3488069	.	-	.	ID=gene-PHA55_RS17025;Name=yfdV;gbkey=Gene;gene=yfdV;gene_biotype=protein_coding;locus_tag=PHA55_RS17025;old_locus_tag=PHA55_17020
NZ_CP116044.1	Protein Homology	CDS	3487125	3488069	.	-	0	ID=cds-WP_000955028.1;Parent=gene-PHA55_RS17025;Dbxref=Genbank:WP_000955028.1;Name=WP_000955028.1;gbkey=CDS;gene=yfdV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311279.1;locus_tag=PHA55_RS17025;product=transporter YfdV;protein_id=WP_000955028.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3488139	3489833	.	-	.	ID=gene-PHA55_RS17030;Name=oxc;gbkey=Gene;gene=oxc;gene_biotype=protein_coding;locus_tag=PHA55_RS17030;old_locus_tag=PHA55_17025
NZ_CP116044.1	Protein Homology	CDS	3488139	3489833	.	-	0	ID=cds-WP_001283490.1;Parent=gene-PHA55_RS17030;Dbxref=Genbank:WP_001283490.1;Name=WP_001283490.1;Ontology_term=GO:0033611,GO:0000287,GO:0008949,GO:0030976;gbkey=CDS;gene=oxc;go_function=magnesium ion binding|0000287||IEA,oxalyl-CoA decarboxylase activity|0008949||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=oxalate catabolic process|0033611||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311280.1;locus_tag=PHA55_RS17030;product=oxalyl-CoA decarboxylase;protein_id=WP_001283490.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3489887	3491137	.	-	.	ID=gene-PHA55_RS17035;Name=frc;gbkey=Gene;gene=frc;gene_biotype=protein_coding;locus_tag=PHA55_RS17035;old_locus_tag=PHA55_17030
NZ_CP116044.1	Protein Homology	CDS	3489887	3491137	.	-	0	ID=cds-WP_000106759.1;Parent=gene-PHA55_RS17035;Dbxref=Genbank:WP_000106759.1;Name=WP_000106759.1;Ontology_term=GO:0009636,GO:0033611,GO:0005515,GO:0033608;gbkey=CDS;gene=frc;go_function=protein binding|0005515||IEA,formyl-CoA transferase activity|0033608||IEA;go_process=response to toxic substance|0009636||IEA,oxalate catabolic process|0033611||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416875.1;locus_tag=PHA55_RS17035;product=formyl-CoA transferase;protein_id=WP_000106759.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3491650	3492282	.	-	.	ID=gene-PHA55_RS17040;Name=yfdX;gbkey=Gene;gene=yfdX;gene_biotype=protein_coding;locus_tag=PHA55_RS17040;old_locus_tag=PHA55_17035
NZ_CP116044.1	Protein Homology	CDS	3491650	3492282	.	-	0	ID=cds-WP_000825604.1;Parent=gene-PHA55_RS17040;Dbxref=Genbank:WP_000825604.1;Name=WP_000825604.1;gbkey=CDS;gene=yfdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416876.1;locus_tag=PHA55_RS17040;product=YfdX family protein;protein_id=WP_000825604.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3492578	3492853	.	+	.	ID=gene-PHA55_RS17045;Name=ypdI;gbkey=Gene;gene=ypdI;gene_biotype=protein_coding;locus_tag=PHA55_RS17045;old_locus_tag=PHA55_17040
NZ_CP116044.1	Protein Homology	CDS	3492578	3492853	.	+	0	ID=cds-WP_000867637.1;Parent=gene-PHA55_RS17045;Dbxref=Genbank:WP_000867637.1;Name=WP_000867637.1;gbkey=CDS;gene=ypdI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439267.1;locus_tag=PHA55_RS17045;product=colanic acid biosynthesis lipoprotein YpdI;protein_id=WP_000867637.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3492930	3493172	.	-	.	ID=gene-PHA55_RS17050;Name=yfdY;gbkey=Gene;gene=yfdY;gene_biotype=protein_coding;locus_tag=PHA55_RS17050;old_locus_tag=PHA55_17045
NZ_CP116044.1	Protein Homology	CDS	3492930	3493172	.	-	0	ID=cds-WP_000639883.1;Parent=gene-PHA55_RS17050;Dbxref=Genbank:WP_000639883.1;Name=WP_000639883.1;gbkey=CDS;gene=yfdY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708247.1;locus_tag=PHA55_RS17050;product=YfdY family protein;protein_id=WP_000639883.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3493525	3494445	.	+	.	ID=gene-PHA55_RS17055;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=PHA55_RS17055;old_locus_tag=PHA55_17050
NZ_CP116044.1	Protein Homology	CDS	3493525	3494445	.	+	0	ID=cds-WP_000484404.1;Parent=gene-PHA55_RS17055;Dbxref=Genbank:WP_000484404.1;Name=WP_000484404.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311285.2;locus_tag=PHA55_RS17055;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WP_000484404.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3494801	3494872	.	+	.	ID=gene-PHA55_RS17060;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=PHA55_RS17060;old_locus_tag=PHA55_17055
NZ_CP116044.1	Protein Homology	CDS	3494801	3494872	.	+	0	ID=cds-WP_010723117.1;Parent=gene-PHA55_RS17060;Dbxref=Genbank:WP_010723117.1;Name=WP_010723117.1;gbkey=CDS;gene=ypdK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=PHA55_RS17060;product=membrane protein YpdK;protein_id=WP_010723117.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3494937	3496175	.	-	.	ID=gene-PHA55_RS17065;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=PHA55_RS17065;old_locus_tag=PHA55_17060
NZ_CP116044.1	Protein Homology	CDS	3494937	3496175	.	-	0	ID=cds-WP_271287468.1;Parent=gene-PHA55_RS17065;Dbxref=Genbank:WP_271287468.1;Name=WP_271287468.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416880.1;locus_tag=PHA55_RS17065;product=alanine transaminase;protein_id=WP_271287468.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3496552	3498249	.	+	.	ID=gene-PHA55_RS17070;Name=ypdA;gbkey=Gene;gene=ypdA;gene_biotype=protein_coding;locus_tag=PHA55_RS17070;old_locus_tag=PHA55_17065
NZ_CP116044.1	Protein Homology	CDS	3496552	3498249	.	+	0	ID=cds-WP_000544359.1;Parent=gene-PHA55_RS17070;Dbxref=Genbank:WP_000544359.1;Name=WP_000544359.1;gbkey=CDS;gene=ypdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311287.1;locus_tag=PHA55_RS17070;product=two-component system sensor histidine kinase YpdA;protein_id=WP_000544359.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3498264	3498998	.	+	.	ID=gene-PHA55_RS17075;Name=ypdB;gbkey=Gene;gene=ypdB;gene_biotype=protein_coding;locus_tag=PHA55_RS17075;old_locus_tag=PHA55_17070
NZ_CP116044.1	Protein Homology	CDS	3498264	3498998	.	+	0	ID=cds-WP_001295458.1;Parent=gene-PHA55_RS17075;Dbxref=Genbank:WP_001295458.1;Name=WP_001295458.1;gbkey=CDS;gene=ypdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311288.1;locus_tag=PHA55_RS17075;product=two-component system response regulator YpdB;protein_id=WP_001295458.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3499011	3499868	.	+	.	ID=gene-PHA55_RS17080;Name=ypdC;gbkey=Gene;gene=ypdC;gene_biotype=protein_coding;locus_tag=PHA55_RS17080;old_locus_tag=PHA55_17075
NZ_CP116044.1	Protein Homology	CDS	3499011	3499868	.	+	0	ID=cds-WP_000646844.1;Parent=gene-PHA55_RS17080;Dbxref=Genbank:WP_000646844.1;Name=WP_000646844.1;gbkey=CDS;gene=ypdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311289.1;locus_tag=PHA55_RS17080;product=AraC family transcriptional regulator;protein_id=WP_000646844.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3499871	3502366	.	-	.	ID=gene-PHA55_RS17085;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=PHA55_RS17085;old_locus_tag=PHA55_17080
NZ_CP116044.1	Protein Homology	CDS	3499871	3502366	.	-	0	ID=cds-WP_271287469.1;Parent=gene-PHA55_RS17085;Dbxref=Genbank:WP_271287469.1;Name=WP_271287469.1;Ontology_term=GO:0006808,GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=regulation of nitrogen utilization|0006808||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708251.1;locus_tag=PHA55_RS17085;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_271287469.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3502391	3503428	.	-	.	ID=gene-PHA55_RS17090;Name=ypdE;gbkey=Gene;gene=ypdE;gene_biotype=protein_coding;locus_tag=PHA55_RS17090;old_locus_tag=PHA55_17085
NZ_CP116044.1	Protein Homology	CDS	3502391	3503428	.	-	0	ID=cds-WP_000366035.1;Parent=gene-PHA55_RS17090;Dbxref=Genbank:WP_000366035.1;Name=WP_000366035.1;gbkey=CDS;gene=ypdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311291.1;locus_tag=PHA55_RS17090;product=aminopeptidase;protein_id=WP_000366035.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3503428	3504513	.	-	.	ID=gene-PHA55_RS17095;Name=ypdF;gbkey=Gene;gene=ypdF;gene_biotype=protein_coding;locus_tag=PHA55_RS17095;old_locus_tag=PHA55_17090
NZ_CP116044.1	Protein Homology	CDS	3503428	3504513	.	-	0	ID=cds-WP_260589837.1;Parent=gene-PHA55_RS17095;Dbxref=Genbank:WP_260589837.1;Name=WP_260589837.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ypdF;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416886.1;locus_tag=PHA55_RS17095;product=aminopeptidase;protein_id=WP_260589837.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3504528	3505775	.	-	.	ID=gene-PHA55_RS17100;Name=fryC;gbkey=Gene;gene=fryC;gene_biotype=protein_coding;locus_tag=PHA55_RS17100;old_locus_tag=PHA55_17095
NZ_CP116044.1	Protein Homology	CDS	3504528	3505775	.	-	0	ID=cds-WP_000985336.1;Parent=gene-PHA55_RS17100;Dbxref=Genbank:WP_000985336.1;Name=WP_000985336.1;gbkey=CDS;gene=fryC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311293.1;locus_tag=PHA55_RS17100;product=PTS fructose transporter subunit IIC;protein_id=WP_000985336.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3505797	3506123	.	-	.	ID=gene-PHA55_RS17105;Name=fryB;gbkey=Gene;gene=fryB;gene_biotype=protein_coding;locus_tag=PHA55_RS17105;old_locus_tag=PHA55_17100
NZ_CP116044.1	Protein Homology	CDS	3505797	3506123	.	-	0	ID=cds-WP_001296874.1;Parent=gene-PHA55_RS17105;Dbxref=Genbank:WP_001296874.1;Name=WP_001296874.1;gbkey=CDS;gene=fryB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311294.1;locus_tag=PHA55_RS17105;product=PTS fructose transporter subunit IIB;protein_id=WP_001296874.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3506342	3507307	.	-	.	ID=gene-PHA55_RS17110;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=PHA55_RS17110;old_locus_tag=PHA55_17105
NZ_CP116044.1	Protein Homology	CDS	3506342	3507307	.	-	0	ID=cds-WP_000170346.1;Parent=gene-PHA55_RS17110;Dbxref=Genbank:WP_000170346.1;Name=WP_000170346.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311295.1;locus_tag=PHA55_RS17110;product=glucokinase;protein_id=WP_000170346.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3507511	3508767	.	+	.	ID=gene-PHA55_RS17115;Name=yfeO;gbkey=Gene;gene=yfeO;gene_biotype=protein_coding;locus_tag=PHA55_RS17115;old_locus_tag=PHA55_17110
NZ_CP116044.1	Protein Homology	CDS	3507511	3508767	.	+	0	ID=cds-WP_000903152.1;Parent=gene-PHA55_RS17115;Dbxref=Genbank:WP_000903152.1;Name=WP_000903152.1;Ontology_term=GO:0005247;gbkey=CDS;gene=yfeO;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311296.1;locus_tag=PHA55_RS17115;product=ion channel protein;protein_id=WP_000903152.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3508882	3509208	.	+	.	ID=gene-PHA55_RS17120;Name=ypeC;gbkey=Gene;gene=ypeC;gene_biotype=protein_coding;locus_tag=PHA55_RS17120;old_locus_tag=PHA55_17115
NZ_CP116044.1	Protein Homology	CDS	3508882	3509208	.	+	0	ID=cds-WP_000490072.1;Parent=gene-PHA55_RS17120;Dbxref=Genbank:WP_000490072.1;Name=WP_000490072.1;gbkey=CDS;gene=ypeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311297.1;locus_tag=PHA55_RS17120;product=DUF2502 domain-containing protein YpeC;protein_id=WP_000490072.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3509349	3510587	.	-	.	ID=gene-PHA55_RS17125;Name=mntH;gbkey=Gene;gene=mntH;gene_biotype=protein_coding;locus_tag=PHA55_RS17125;old_locus_tag=PHA55_17120
NZ_CP116044.1	Protein Homology	CDS	3509349	3510587	.	-	0	ID=cds-WP_000186369.1;Parent=gene-PHA55_RS17125;Dbxref=Genbank:WP_000186369.1;Name=WP_000186369.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mntH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311298.1;locus_tag=PHA55_RS17125;product=Nramp family divalent metal transporter;protein_id=WP_000186369.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3510923	3512125	.	+	.	ID=gene-PHA55_RS17130;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;locus_tag=PHA55_RS17130;old_locus_tag=PHA55_17125
NZ_CP116044.1	Protein Homology	CDS	3510923	3512125	.	+	0	ID=cds-WP_000376337.1;Parent=gene-PHA55_RS17130;Dbxref=Genbank:WP_000376337.1;Name=WP_000376337.1;gbkey=CDS;gene=nupC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416894.1;locus_tag=PHA55_RS17130;product=nucleoside permease NupC;protein_id=WP_000376337.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3512175	3514364	.	-	.	ID=gene-PHA55_RS17135;Name=pdeA;gbkey=Gene;gene=pdeA;gene_biotype=protein_coding;locus_tag=PHA55_RS17135;old_locus_tag=PHA55_17130
NZ_CP116044.1	Protein Homology	CDS	3512175	3514364	.	-	0	ID=cds-WP_000497400.1;Parent=gene-PHA55_RS17135;Dbxref=Genbank:WP_000497400.1;Name=WP_000497400.1;gbkey=CDS;gene=pdeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416896.4;locus_tag=PHA55_RS17135;product=sensor domain-containing phosphodiesterase;protein_id=WP_000497400.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3514573	3514648	.	-	.	ID=gene-PHA55_RS17140;Name=PHA55_RS17140;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS17140;old_locus_tag=PHA55_17135
NZ_CP116044.1	tRNAscan-SE	tRNA	3514573	3514648	.	-	.	ID=rna-PHA55_RS17140;Parent=gene-PHA55_RS17140;anticodon=(pos:complement(3514613..3514615));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS17140;product=tRNA-Ala
NZ_CP116044.1	tRNAscan-SE	exon	3514573	3514648	.	-	.	ID=exon-PHA55_RS17140-1;Parent=rna-PHA55_RS17140;anticodon=(pos:complement(3514613..3514615));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS17140;product=tRNA-Ala
NZ_CP116044.1	RefSeq	gene	3514688	3514763	.	-	.	ID=gene-PHA55_RS17145;Name=PHA55_RS17145;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS17145;old_locus_tag=PHA55_17140
NZ_CP116044.1	tRNAscan-SE	tRNA	3514688	3514763	.	-	.	ID=rna-PHA55_RS17145;Parent=gene-PHA55_RS17145;anticodon=(pos:complement(3514728..3514730));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS17145;product=tRNA-Ala
NZ_CP116044.1	tRNAscan-SE	exon	3514688	3514763	.	-	.	ID=exon-PHA55_RS17145-1;Parent=rna-PHA55_RS17145;anticodon=(pos:complement(3514728..3514730));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS17145;product=tRNA-Ala
NZ_CP116044.1	RefSeq	gene	3514984	3515343	.	+	.	ID=gene-PHA55_RS17150;Name=yfeC;gbkey=Gene;gene=yfeC;gene_biotype=protein_coding;locus_tag=PHA55_RS17150;old_locus_tag=PHA55_17145
NZ_CP116044.1	Protein Homology	CDS	3514984	3515343	.	+	0	ID=cds-WP_000472021.1;Parent=gene-PHA55_RS17150;Dbxref=Genbank:WP_000472021.1;Name=WP_000472021.1;gbkey=CDS;gene=yfeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311301.3;locus_tag=PHA55_RS17150;product=putative DNA-binding transcriptional regulator;protein_id=WP_000472021.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3515345	3515737	.	+	.	ID=gene-PHA55_RS17155;Name=yfeD;gbkey=Gene;gene=yfeD;gene_biotype=protein_coding;locus_tag=PHA55_RS17155;old_locus_tag=PHA55_17150
NZ_CP116044.1	Protein Homology	CDS	3515345	3515737	.	+	0	ID=cds-WP_000826503.1;Parent=gene-PHA55_RS17155;Dbxref=Genbank:WP_000826503.1;Name=WP_000826503.1;gbkey=CDS;gene=yfeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416898.3;locus_tag=PHA55_RS17155;product=putative DNA-binding transcriptional regulator;protein_id=WP_000826503.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3515789	3517204	.	-	.	ID=gene-PHA55_RS17160;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=PHA55_RS17160;old_locus_tag=PHA55_17155
NZ_CP116044.1	Protein Homology	CDS	3515789	3517204	.	-	0	ID=cds-WP_000695655.1;Parent=gene-PHA55_RS17160;Dbxref=Genbank:WP_000695655.1;Name=WP_000695655.1;Ontology_term=GO:0006424,GO:0004818,GO:0009332;gbkey=CDS;gene=gltX;go_component=glutamate-tRNA ligase complex|0009332||IEA;go_function=glutamate-tRNA ligase activity|0004818||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416899.1;locus_tag=PHA55_RS17160;product=glutamate--tRNA ligase;protein_id=WP_000695655.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3517463	3517538	.	+	.	ID=gene-PHA55_RS17165;Name=PHA55_RS17165;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS17165;old_locus_tag=PHA55_17160
NZ_CP116044.1	tRNAscan-SE	tRNA	3517463	3517538	.	+	.	ID=rna-PHA55_RS17165;Parent=gene-PHA55_RS17165;anticodon=(pos:3517496..3517498);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS17165;product=tRNA-Val
NZ_CP116044.1	tRNAscan-SE	exon	3517463	3517538	.	+	.	ID=exon-PHA55_RS17165-1;Parent=rna-PHA55_RS17165;anticodon=(pos:3517496..3517498);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS17165;product=tRNA-Val
NZ_CP116044.1	RefSeq	gene	3517583	3517658	.	+	.	ID=gene-PHA55_RS17170;Name=PHA55_RS17170;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS17170;old_locus_tag=PHA55_17165
NZ_CP116044.1	tRNAscan-SE	tRNA	3517583	3517658	.	+	.	ID=rna-PHA55_RS17170;Parent=gene-PHA55_RS17170;anticodon=(pos:3517616..3517618);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS17170;product=tRNA-Val
NZ_CP116044.1	tRNAscan-SE	exon	3517583	3517658	.	+	.	ID=exon-PHA55_RS17170-1;Parent=rna-PHA55_RS17170;anticodon=(pos:3517616..3517618);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS17170;product=tRNA-Val
NZ_CP116044.1	RefSeq	gene	3517705	3517780	.	+	.	ID=gene-PHA55_RS17175;Name=PHA55_RS17175;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS17175;old_locus_tag=PHA55_17170
NZ_CP116044.1	tRNAscan-SE	tRNA	3517705	3517780	.	+	.	ID=rna-PHA55_RS17175;Parent=gene-PHA55_RS17175;anticodon=(pos:3517738..3517740);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS17175;product=tRNA-Val
NZ_CP116044.1	tRNAscan-SE	exon	3517705	3517780	.	+	.	ID=exon-PHA55_RS17175-1;Parent=rna-PHA55_RS17175;anticodon=(pos:3517738..3517740);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS17175;product=tRNA-Val
NZ_CP116044.1	RefSeq	gene	3517785	3517860	.	+	.	ID=gene-PHA55_RS17180;Name=PHA55_RS17180;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS17180;old_locus_tag=PHA55_17175
NZ_CP116044.1	tRNAscan-SE	tRNA	3517785	3517860	.	+	.	ID=rna-PHA55_RS17180;Parent=gene-PHA55_RS17180;anticodon=(pos:3517818..3517820);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS17180;product=tRNA-Lys
NZ_CP116044.1	tRNAscan-SE	exon	3517785	3517860	.	+	.	ID=exon-PHA55_RS17180-1;Parent=rna-PHA55_RS17180;anticodon=(pos:3517818..3517820);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS17180;product=tRNA-Lys
NZ_CP116044.1	RefSeq	gene	3517891	3518016	.	+	.	ID=gene-PHA55_RS17185;Name=PHA55_RS17185;gbkey=Gene;gene_biotype=ncRNA;locus_tag=PHA55_RS17185;old_locus_tag=PHA55_17180
NZ_CP116044.1	cmsearch	ncRNA	3517891	3518016	.	+	.	ID=rna-PHA55_RS17185;Parent=gene-PHA55_RS17185;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS17185;product=RtT sRNA
NZ_CP116044.1	cmsearch	exon	3517891	3518016	.	+	.	ID=exon-PHA55_RS17185-1;Parent=rna-PHA55_RS17185;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS17185;product=RtT sRNA
NZ_CP116044.1	RefSeq	gene	3518125	3519009	.	-	.	ID=gene-PHA55_RS17190;Name=xapR;gbkey=Gene;gene=xapR;gene_biotype=protein_coding;locus_tag=PHA55_RS17190;old_locus_tag=PHA55_17185
NZ_CP116044.1	Protein Homology	CDS	3518125	3519009	.	-	0	ID=cds-WP_001341600.1;Parent=gene-PHA55_RS17190;Dbxref=Genbank:WP_001341600.1;Name=WP_001341600.1;gbkey=CDS;gene=xapR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416900.1;locus_tag=PHA55_RS17190;product=DNA-binding transcriptional regulator XapR;protein_id=WP_001341600.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3519050	3519208	.	-	.	ID=gene-PHA55_RS17195;Name=PHA55_RS17195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS17195;old_locus_tag=PHA55_17190
NZ_CP116044.1	Protein Homology	CDS	3519050	3519208	.	-	0	ID=cds-WP_000651752.1;Parent=gene-PHA55_RS17195;Dbxref=Genbank:WP_000651752.1;Name=WP_000651752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392449.1;locus_tag=PHA55_RS17195;product=DUF1427 family protein;protein_id=WP_000651752.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3519261	3520517	.	-	.	ID=gene-PHA55_RS17200;Name=xapB;gbkey=Gene;gene=xapB;gene_biotype=protein_coding;locus_tag=PHA55_RS17200;old_locus_tag=PHA55_17195
NZ_CP116044.1	Protein Homology	CDS	3519261	3520517	.	-	0	ID=cds-WP_000020401.1;Parent=gene-PHA55_RS17200;Dbxref=Genbank:WP_000020401.1;Name=WP_000020401.1;gbkey=CDS;gene=xapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416901.1;locus_tag=PHA55_RS17200;product=xanthosine/proton symporter XapB;protein_id=WP_000020401.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3520577	3521410	.	-	.	ID=gene-PHA55_RS17205;Name=xapA;gbkey=Gene;gene=xapA;gene_biotype=protein_coding;locus_tag=PHA55_RS17205;old_locus_tag=PHA55_17200
NZ_CP116044.1	Protein Homology	CDS	3520577	3521410	.	-	0	ID=cds-WP_000084573.1;Parent=gene-PHA55_RS17205;Dbxref=Genbank:WP_000084573.1;Name=WP_000084573.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=xapA;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416902.1;locus_tag=PHA55_RS17205;product=xanthosine phosphorylase;protein_id=WP_000084573.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3521659	3522423	.	+	.	ID=gene-PHA55_RS17210;Name=yfeN;gbkey=Gene;gene=yfeN;gene_biotype=protein_coding;locus_tag=PHA55_RS17210;old_locus_tag=PHA55_17205
NZ_CP116044.1	Protein Homology	CDS	3521659	3522423	.	+	0	ID=cds-WP_000716421.1;Parent=gene-PHA55_RS17210;Dbxref=Genbank:WP_000716421.1;Name=WP_000716421.1;Ontology_term=GO:0009279;gbkey=CDS;gene=yfeN;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416903.1;locus_tag=PHA55_RS17210;product=outer membrane protein OmpK;protein_id=WP_000716421.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3522462	3523388	.	-	.	ID=gene-PHA55_RS17215;Name=yfeR;gbkey=Gene;gene=yfeR;gene_biotype=protein_coding;locus_tag=PHA55_RS17215;old_locus_tag=PHA55_17210
NZ_CP116044.1	Protein Homology	CDS	3522462	3523388	.	-	0	ID=cds-WP_271287470.1;Parent=gene-PHA55_RS17215;Dbxref=Genbank:WP_271287470.1;Name=WP_271287470.1;gbkey=CDS;gene=yfeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416904.1;locus_tag=PHA55_RS17215;product=LysR family transcriptional regulator;protein_id=WP_271287470.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3523478	3524476	.	+	.	ID=gene-PHA55_RS17220;Name=yfeH;gbkey=Gene;gene=yfeH;gene_biotype=protein_coding;locus_tag=PHA55_RS17220;old_locus_tag=PHA55_17215
NZ_CP116044.1	Protein Homology	CDS	3523478	3524476	.	+	0	ID=cds-WP_000765587.1;Parent=gene-PHA55_RS17220;Dbxref=Genbank:WP_000765587.1;Name=WP_000765587.1;gbkey=CDS;gene=yfeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311309.1;locus_tag=PHA55_RS17220;product=bile acid:sodium symporter;protein_id=WP_000765587.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3524473	3524691	.	-	.	ID=gene-PHA55_RS17225;Name=ypeB;gbkey=Gene;gene=ypeB;gene_biotype=protein_coding;locus_tag=PHA55_RS17225;old_locus_tag=PHA55_17220
NZ_CP116044.1	Protein Homology	CDS	3524473	3524691	.	-	0	ID=cds-WP_000410201.1;Parent=gene-PHA55_RS17225;Dbxref=Genbank:WP_000410201.1;Name=WP_000410201.1;gbkey=CDS;gene=ypeB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588464.1;locus_tag=PHA55_RS17225;product=DUF3820 family protein;protein_id=WP_000410201.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3524693	3526708	.	-	.	ID=gene-PHA55_RS17230;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=PHA55_RS17230;old_locus_tag=PHA55_17225
NZ_CP116044.1	Protein Homology	CDS	3524693	3526708	.	-	0	ID=cds-WP_000443665.1;Parent=gene-PHA55_RS17230;Dbxref=Genbank:WP_000443665.1;Name=WP_000443665.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416906.1;locus_tag=PHA55_RS17230;product=NAD-dependent DNA ligase LigA;protein_id=WP_000443665.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3526779	3527765	.	-	.	ID=gene-PHA55_RS17235;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=PHA55_RS17235;old_locus_tag=PHA55_17230
NZ_CP116044.1	Protein Homology	CDS	3526779	3527765	.	-	0	ID=cds-WP_001297862.1;Parent=gene-PHA55_RS17235;Dbxref=Genbank:WP_001297862.1;Name=WP_001297862.1;Ontology_term=GO:0000917,GO:0005515;gbkey=CDS;gene=zipA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311311.1;locus_tag=PHA55_RS17235;product=cell division protein ZipA;protein_id=WP_001297862.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3527995	3528756	.	+	.	ID=gene-PHA55_RS17240;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=PHA55_RS17240;old_locus_tag=PHA55_17235
NZ_CP116044.1	Protein Homology	CDS	3527995	3528756	.	+	0	ID=cds-WP_000254843.1;Parent=gene-PHA55_RS17240;Dbxref=Genbank:WP_000254843.1;Name=WP_000254843.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311312.1;locus_tag=PHA55_RS17240;product=sulfate transporter CysZ;protein_id=WP_000254843.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3528941	3529912	.	+	.	ID=gene-PHA55_RS17245;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=PHA55_RS17245;old_locus_tag=PHA55_17240
NZ_CP116044.1	Protein Homology	CDS	3528941	3529912	.	+	0	ID=cds-WP_226452936.1;Parent=gene-PHA55_RS17245;Dbxref=Genbank:WP_226452936.1;Name=WP_226452936.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=PHA55_RS17245;product=cysteine synthase A;protein_id=WP_226452936.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3530296	3530553	.	+	.	ID=gene-PHA55_RS17250;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=PHA55_RS17250;old_locus_tag=PHA55_17245
NZ_CP116044.1	Protein Homology	CDS	3530296	3530553	.	+	0	ID=cds-WP_000487600.1;Parent=gene-PHA55_RS17250;Dbxref=Genbank:WP_000487600.1;Name=WP_000487600.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=PHA55_RS17250;product=phosphocarrier protein Hpr;protein_id=WP_000487600.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3530598	3532325	.	+	.	ID=gene-PHA55_RS17255;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=PHA55_RS17255;old_locus_tag=PHA55_17250
NZ_CP116044.1	Protein Homology	CDS	3530598	3532325	.	+	0	ID=cds-WP_000623136.1;Parent=gene-PHA55_RS17255;Dbxref=Genbank:WP_000623136.1;Name=WP_000623136.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311315.1;locus_tag=PHA55_RS17255;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WP_000623136.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3532366	3532875	.	+	.	ID=gene-PHA55_RS17260;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=PHA55_RS17260;old_locus_tag=PHA55_17255
NZ_CP116044.1	Protein Homology	CDS	3532366	3532875	.	+	0	ID=cds-WP_000522249.1;Parent=gene-PHA55_RS17260;Dbxref=Genbank:WP_000522249.1;Name=WP_000522249.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=PHA55_RS17260;product=PTS glucose transporter subunit IIA;protein_id=WP_000522249.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3532917	3533768	.	-	.	ID=gene-PHA55_RS17265;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;gene_synonym=thiJ;locus_tag=PHA55_RS17265;old_locus_tag=PHA55_17260
NZ_CP116044.1	Protein Homology	CDS	3532917	3533768	.	-	0	ID=cds-WP_000096663.1;Parent=gene-PHA55_RS17265;Dbxref=Genbank:WP_000096663.1;Name=WP_000096663.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxK;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416913.1;locus_tag=PHA55_RS17265;product=pyridoxine/pyridoxal/pyridoxamine kinase;protein_id=WP_000096663.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3533873	3534241	.	+	.	ID=gene-PHA55_RS17270;Name=yfeK;gbkey=Gene;gene=yfeK;gene_biotype=protein_coding;locus_tag=PHA55_RS17270;old_locus_tag=PHA55_17265
NZ_CP116044.1	Protein Homology	CDS	3533873	3534241	.	+	0	ID=cds-WP_000719943.1;Parent=gene-PHA55_RS17270;Dbxref=Genbank:WP_000719943.1;Name=WP_000719943.1;gbkey=CDS;gene=yfeK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001592994.1;locus_tag=PHA55_RS17270;product=YfeK family protein;protein_id=WP_000719943.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3534244	3535155	.	-	.	ID=gene-PHA55_RS17275;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=PHA55_RS17275;old_locus_tag=PHA55_17270
NZ_CP116044.1	Protein Homology	CDS	3534244	3535155	.	-	0	ID=cds-WP_001297645.1;Parent=gene-PHA55_RS17275;Dbxref=Genbank:WP_001297645.1;Name=WP_001297645.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416916.1;locus_tag=PHA55_RS17275;product=cysteine synthase B;protein_id=WP_001297645.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3535289	3536386	.	-	.	ID=gene-PHA55_RS17280;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=PHA55_RS17280;old_locus_tag=PHA55_17275
NZ_CP116044.1	Protein Homology	CDS	3535289	3536386	.	-	0	ID=cds-WP_000021039.1;Parent=gene-PHA55_RS17280;Dbxref=Genbank:WP_000021039.1;Name=WP_000021039.1;Ontology_term=GO:0008272,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416917.1;locus_tag=PHA55_RS17280;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WP_000021039.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3536376	3537251	.	-	.	ID=gene-PHA55_RS17285;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=PHA55_RS17285;old_locus_tag=PHA55_17280
NZ_CP116044.1	Protein Homology	CDS	3536376	3537251	.	-	0	ID=cds-WP_000852686.1;Parent=gene-PHA55_RS17285;Dbxref=Genbank:WP_000852686.1;Name=WP_000852686.1;Ontology_term=GO:0008272,GO:0055085,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026168.2;locus_tag=PHA55_RS17285;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WP_000852686.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3537251	3538084	.	-	.	ID=gene-PHA55_RS17290;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=PHA55_RS17290;old_locus_tag=PHA55_17285
NZ_CP116044.1	Protein Homology	CDS	3537251	3538084	.	-	0	ID=cds-WP_000458406.1;Parent=gene-PHA55_RS17290;Dbxref=Genbank:WP_000458406.1;Name=WP_000458406.1;Ontology_term=GO:0008272,GO:0055085,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=PHA55_RS17290;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WP_000458406.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3538084	3539100	.	-	.	ID=gene-PHA55_RS17295;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=PHA55_RS17295;old_locus_tag=PHA55_17290
NZ_CP116044.1	Protein Homology	CDS	3538084	3539100	.	-	0	ID=cds-WP_000290223.1;Parent=gene-PHA55_RS17295;Dbxref=Genbank:WP_000290223.1;Name=WP_000290223.1;gbkey=CDS;gene=cysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311323.1;locus_tag=PHA55_RS17295;product=thiosulfate/sulfate ABC transporter substrate-binding protein CysP;protein_id=WP_000290223.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3539271	3540062	.	-	.	ID=gene-PHA55_RS17300;Name=ucpA;gbkey=Gene;gene=ucpA;gene_biotype=protein_coding;locus_tag=PHA55_RS17300;old_locus_tag=PHA55_17295
NZ_CP116044.1	Protein Homology	CDS	3539271	3540062	.	-	0	ID=cds-WP_000517431.1;Parent=gene-PHA55_RS17300;Dbxref=Genbank:WP_000517431.1;Name=WP_000517431.1;gbkey=CDS;gene=ucpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416921.4;locus_tag=PHA55_RS17300;product=SDR family oxidoreductase UcpA;protein_id=WP_000517431.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3540191	3541048	.	-	.	ID=gene-PHA55_RS17305;Name=murR;gbkey=Gene;gene=murR;gene_biotype=protein_coding;locus_tag=PHA55_RS17305;old_locus_tag=PHA55_17300
NZ_CP116044.1	Protein Homology	CDS	3540191	3541048	.	-	0	ID=cds-WP_000966471.1;Parent=gene-PHA55_RS17305;Dbxref=Genbank:WP_000966471.1;Name=WP_000966471.1;gbkey=CDS;gene=murR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416922.1;locus_tag=PHA55_RS17305;product=HTH-type transcriptional regulator MurR;protein_id=WP_000966471.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3541212	3542108	.	+	.	ID=gene-PHA55_RS17310;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=PHA55_RS17310;old_locus_tag=PHA55_17305
NZ_CP116044.1	Protein Homology	CDS	3541212	3542108	.	+	0	ID=cds-WP_001175648.1;Parent=gene-PHA55_RS17310;Dbxref=Genbank:WP_001175648.1;Name=WP_001175648.1;Ontology_term=GO:0006040,GO:0009254,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416923.1;locus_tag=PHA55_RS17310;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_001175648.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3542112	3543536	.	+	.	ID=gene-PHA55_RS17315;Name=murP;gbkey=Gene;gene=murP;gene_biotype=protein_coding;locus_tag=PHA55_RS17315;old_locus_tag=PHA55_17310
NZ_CP116044.1	Protein Homology	CDS	3542112	3543536	.	+	0	ID=cds-WP_001040482.1;Parent=gene-PHA55_RS17315;Dbxref=Genbank:WP_001040482.1;Name=WP_001040482.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=murP;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416924.1;locus_tag=PHA55_RS17315;product=PTS N-acetylmuramic acid transporter subunit IIBC;protein_id=WP_001040482.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3543541	3544845	.	+	.	ID=gene-PHA55_RS17320;Name=pbp4b;gbkey=Gene;gene=pbp4b;gene_biotype=protein_coding;locus_tag=PHA55_RS17320;old_locus_tag=PHA55_17315
NZ_CP116044.1	Protein Homology	CDS	3543541	3544845	.	+	0	ID=cds-WP_001315775.1;Parent=gene-PHA55_RS17320;Dbxref=Genbank:WP_001315775.1;Name=WP_001315775.1;gbkey=CDS;gene=pbp4b;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311328.1;locus_tag=PHA55_RS17320;product=penicillin binding protein PBP4B;protein_id=WP_001315775.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3544903	3545802	.	-	.	ID=gene-PHA55_RS17325;Name=yfeX;gbkey=Gene;gene=yfeX;gene_biotype=protein_coding;locus_tag=PHA55_RS17325;old_locus_tag=PHA55_17320
NZ_CP116044.1	Protein Homology	CDS	3544903	3545802	.	-	0	ID=cds-WP_000084590.1;Parent=gene-PHA55_RS17325;Dbxref=Genbank:WP_000084590.1;Name=WP_000084590.1;gbkey=CDS;gene=yfeX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311329.2;locus_tag=PHA55_RS17325;product=porphyrinogen peroxidase;protein_id=WP_000084590.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3545898	3546473	.	-	.	ID=gene-PHA55_RS17330;Name=yfeY;gbkey=Gene;gene=yfeY;gene_biotype=protein_coding;locus_tag=PHA55_RS17330;old_locus_tag=PHA55_17325
NZ_CP116044.1	Protein Homology	CDS	3545898	3546473	.	-	0	ID=cds-WP_000838945.1;Parent=gene-PHA55_RS17330;Dbxref=Genbank:WP_000838945.1;Name=WP_000838945.1;gbkey=CDS;gene=yfeY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311330.1;locus_tag=PHA55_RS17330;product=RpoE-regulated lipoprotein;protein_id=WP_000838945.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3546534	3546983	.	-	.	ID=gene-PHA55_RS17335;Name=yfeZ;gbkey=Gene;gene=yfeZ;gene_biotype=protein_coding;locus_tag=PHA55_RS17335;old_locus_tag=PHA55_17330
NZ_CP116044.1	Protein Homology	CDS	3546534	3546983	.	-	0	ID=cds-WP_000842944.1;Parent=gene-PHA55_RS17335;Dbxref=Genbank:WP_000842944.1;Name=WP_000842944.1;gbkey=CDS;gene=yfeZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311331.2;locus_tag=PHA55_RS17335;product=DUF2919 domain-containing protein;protein_id=WP_000842944.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3546970	3547395	.	-	.	ID=gene-PHA55_RS17340;Name=ypeA;gbkey=Gene;gene=ypeA;gene_biotype=protein_coding;locus_tag=PHA55_RS17340;old_locus_tag=PHA55_17335
NZ_CP116044.1	Protein Homology	CDS	3546970	3547395	.	-	0	ID=cds-WP_000406000.1;Parent=gene-PHA55_RS17340;Dbxref=Genbank:WP_000406000.1;Name=WP_000406000.1;Ontology_term=GO:0008080;gbkey=CDS;gene=ypeA;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311332.2;locus_tag=PHA55_RS17340;product=GNAT family acetyltransferase;protein_id=WP_000406000.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3547609	3548478	.	+	.	ID=gene-PHA55_RS17345;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=PHA55_RS17345;old_locus_tag=PHA55_17340
NZ_CP116044.1	Protein Homology	CDS	3547609	3548478	.	+	0	ID=cds-WP_000102891.1;Parent=gene-PHA55_RS17345;Dbxref=Genbank:WP_000102891.1;Name=WP_000102891.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311333.1;locus_tag=PHA55_RS17345;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=WP_000102891.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3548482	3549381	.	+	.	ID=gene-PHA55_RS17350;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=PHA55_RS17350;old_locus_tag=PHA55_17345
NZ_CP116044.1	Protein Homology	CDS	3548482	3549381	.	+	0	ID=cds-WP_000801367.1;Parent=gene-PHA55_RS17350;Dbxref=Genbank:WP_000801367.1;Name=WP_000801367.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311334.1;locus_tag=PHA55_RS17350;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_000801367.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3549387	3550439	.	-	.	ID=gene-PHA55_RS17355;Name=eutR;gbkey=Gene;gene=eutR;gene_biotype=protein_coding;locus_tag=PHA55_RS17355;old_locus_tag=PHA55_17350
NZ_CP116044.1	Protein Homology	CDS	3549387	3550439	.	-	0	ID=cds-WP_000753700.1;Parent=gene-PHA55_RS17355;Dbxref=Genbank:WP_000753700.1;Name=WP_000753700.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=eutR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311335.1;locus_tag=PHA55_RS17355;product=HTH-type transcriptional regulator EutR;protein_id=WP_000753700.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3550485	3550985	.	-	.	ID=gene-PHA55_RS17360;Name=eutK;gbkey=Gene;gene=eutK;gene_biotype=protein_coding;locus_tag=PHA55_RS17360;old_locus_tag=PHA55_17355
NZ_CP116044.1	Protein Homology	CDS	3550485	3550985	.	-	0	ID=cds-WP_000606257.1;Parent=gene-PHA55_RS17360;Dbxref=Genbank:WP_000606257.1;Name=WP_000606257.1;gbkey=CDS;gene=eutK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416933.4;locus_tag=PHA55_RS17360;product=ethanolamine utilization microcompartment protein EutK;protein_id=WP_000606257.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3550998	3551657	.	-	.	ID=gene-PHA55_RS17365;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;locus_tag=PHA55_RS17365;old_locus_tag=PHA55_17360
NZ_CP116044.1	Protein Homology	CDS	3550998	3551657	.	-	0	ID=cds-WP_001111038.1;Parent=gene-PHA55_RS17365;Dbxref=Genbank:WP_001111038.1;Name=WP_001111038.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=eutL;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708289.1;locus_tag=PHA55_RS17365;product=ethanolamine utilization microcompartment protein EutL;protein_id=WP_001111038.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3551667	3552554	.	-	.	ID=gene-PHA55_RS17370;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=PHA55_RS17370;old_locus_tag=PHA55_17365
NZ_CP116044.1	Protein Homology	CDS	3551667	3552554	.	-	0	ID=cds-WP_000372364.1;Parent=gene-PHA55_RS17370;Dbxref=Genbank:WP_000372364.1;Name=WP_000372364.1;gbkey=CDS;gene=eutC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416935.1;locus_tag=PHA55_RS17370;product=ethanolamine ammonia-lyase subunit beta;protein_id=WP_000372364.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3552575	3553936	.	-	.	ID=gene-PHA55_RS17375;Name=eutB;gbkey=Gene;gene=eutB;gene_biotype=protein_coding;locus_tag=PHA55_RS17375;old_locus_tag=PHA55_17370
NZ_CP116044.1	Protein Homology	CDS	3552575	3553936	.	-	0	ID=cds-WP_000769961.1;Parent=gene-PHA55_RS17375;Dbxref=Genbank:WP_000769961.1;Name=WP_000769961.1;gbkey=CDS;gene=eutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311339.1;locus_tag=PHA55_RS17375;product=ethanolamine ammonia-lyase subunit alpha;protein_id=WP_000769961.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3553948	3555351	.	-	.	ID=gene-PHA55_RS17380;Name=eutA;gbkey=Gene;gene=eutA;gene_biotype=protein_coding;locus_tag=PHA55_RS17380;old_locus_tag=PHA55_17375
NZ_CP116044.1	Protein Homology	CDS	3553948	3555351	.	-	0	ID=cds-WP_001097480.1;Parent=gene-PHA55_RS17380;Dbxref=Genbank:WP_001097480.1;Name=WP_001097480.1;gbkey=CDS;gene=eutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311340.1;locus_tag=PHA55_RS17380;product=ethanolamine ammonia-lyase reactivating factor EutA;protein_id=WP_001097480.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3555348	3556574	.	-	.	ID=gene-PHA55_RS17385;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=protein_coding;locus_tag=PHA55_RS17385;old_locus_tag=PHA55_17380
NZ_CP116044.1	Protein Homology	CDS	3555348	3556574	.	-	0	ID=cds-WP_000512372.1;Parent=gene-PHA55_RS17385;Dbxref=Genbank:WP_000512372.1;Name=WP_000512372.1;Ontology_term=GO:0034229,GO:0034228,GO:0016020;gbkey=CDS;gene=eutH;go_component=membrane|0016020||IEA;go_function=ethanolamine transmembrane transporter activity|0034228||IEA;go_process=ethanolamine transport|0034229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416947.1;locus_tag=PHA55_RS17385;product=ethanolamine utilization protein EutH;protein_id=WP_000512372.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3556691	3557878	.	-	.	ID=gene-PHA55_RS17390;Name=eutG;gbkey=Gene;gene=eutG;gene_biotype=protein_coding;locus_tag=PHA55_RS17390;old_locus_tag=PHA55_17385
NZ_CP116044.1	Protein Homology	CDS	3556691	3557878	.	-	0	ID=cds-WP_260589840.1;Parent=gene-PHA55_RS17390;Dbxref=Genbank:WP_260589840.1;Name=WP_260589840.1;Ontology_term=GO:0016491;gbkey=CDS;gene=eutG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311342.2;locus_tag=PHA55_RS17390;product=ethanolamine utilization ethanol dehydrogenase EutG;protein_id=WP_260589840.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3557868	3558704	.	-	.	ID=gene-PHA55_RS17395;Name=eutJ;gbkey=Gene;gene=eutJ;gene_biotype=protein_coding;locus_tag=PHA55_RS17395;old_locus_tag=PHA55_17390
NZ_CP116044.1	Protein Homology	CDS	3557868	3558704	.	-	0	ID=cds-WP_000929726.1;Parent=gene-PHA55_RS17395;Dbxref=Genbank:WP_000929726.1;Name=WP_000929726.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=eutJ;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416949.1;locus_tag=PHA55_RS17395;product=ethanolamine utilization protein EutJ;protein_id=WP_000929726.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3558715	3560118	.	-	.	ID=gene-PHA55_RS17400;Name=eutE;gbkey=Gene;gene=eutE;gene_biotype=protein_coding;locus_tag=PHA55_RS17400;old_locus_tag=PHA55_17395
NZ_CP116044.1	Protein Homology	CDS	3558715	3560118	.	-	0	ID=cds-WP_001075711.1;Parent=gene-PHA55_RS17400;Dbxref=Genbank:WP_001075711.1;Name=WP_001075711.1;gbkey=CDS;gene=eutE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416950.1;locus_tag=PHA55_RS17400;product=aldehyde dehydrogenase EutE;protein_id=WP_001075711.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3560130	3560417	.	-	.	ID=gene-PHA55_RS17405;Name=eutN;gbkey=Gene;gene=eutN;gene_biotype=protein_coding;locus_tag=PHA55_RS17405;old_locus_tag=PHA55_17400
NZ_CP116044.1	Protein Homology	CDS	3560130	3560417	.	-	0	ID=cds-WP_000762196.1;Parent=gene-PHA55_RS17405;Dbxref=Genbank:WP_000762196.1;Name=WP_000762196.1;gbkey=CDS;gene=eutN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416951.1;locus_tag=PHA55_RS17405;product=ethanolamine utilization microcompartment protein EutN;protein_id=WP_000762196.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3560524	3560817	.	-	.	ID=gene-PHA55_RS17410;Name=eutM;gbkey=Gene;gene=eutM;gene_biotype=protein_coding;locus_tag=PHA55_RS17410;old_locus_tag=PHA55_17405
NZ_CP116044.1	Protein Homology	CDS	3560524	3560817	.	-	0	ID=cds-WP_000387713.1;Parent=gene-PHA55_RS17410;Dbxref=Genbank:WP_000387713.1;Name=WP_000387713.1;gbkey=CDS;gene=eutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416952.2;locus_tag=PHA55_RS17410;product=ethanolamine utilization microcompartment protein EutM;protein_id=WP_000387713.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3560856	3561872	.	-	.	ID=gene-PHA55_RS17415;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=PHA55_RS17415;old_locus_tag=PHA55_17410
NZ_CP116044.1	Protein Homology	CDS	3560856	3561872	.	-	0	ID=cds-WP_000582977.1;Parent=gene-PHA55_RS17415;Dbxref=Genbank:WP_000582977.1;Name=WP_000582977.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416953.1;locus_tag=PHA55_RS17415;product=phosphate acetyltransferase;protein_id=WP_000582977.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3561869	3562672	.	-	.	ID=gene-PHA55_RS17420;Name=eutT;gbkey=Gene;gene=eutT;gene_biotype=protein_coding;locus_tag=PHA55_RS17420;old_locus_tag=PHA55_17415
NZ_CP116044.1	Protein Homology	CDS	3561869	3562672	.	-	0	ID=cds-WP_000651298.1;Parent=gene-PHA55_RS17420;Dbxref=Genbank:WP_000651298.1;Name=WP_000651298.1;Ontology_term=GO:0006580,GO:0008817;gbkey=CDS;gene=eutT;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=ethanolamine metabolic process|0006580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416954.1;locus_tag=PHA55_RS17420;product=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;protein_id=WP_000651298.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3562669	3563370	.	-	.	ID=gene-PHA55_RS17425;Name=eutQ;gbkey=Gene;gene=eutQ;gene_biotype=protein_coding;locus_tag=PHA55_RS17425;old_locus_tag=PHA55_17420
NZ_CP116044.1	Protein Homology	CDS	3562669	3563370	.	-	0	ID=cds-WP_000733903.1;Parent=gene-PHA55_RS17425;Dbxref=Genbank:WP_000733903.1;Name=WP_000733903.1;gbkey=CDS;gene=eutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416955.1;locus_tag=PHA55_RS17425;product=ethanolamine utilization acetate kinase EutQ;protein_id=WP_000733903.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3563345	3563824	.	-	.	ID=gene-PHA55_RS17430;Name=eutP;gbkey=Gene;gene=eutP;gene_biotype=protein_coding;locus_tag=PHA55_RS17430;old_locus_tag=PHA55_17425
NZ_CP116044.1	Protein Homology	CDS	3563345	3563824	.	-	0	ID=cds-WP_000820764.1;Parent=gene-PHA55_RS17430;Dbxref=Genbank:WP_000820764.1;Name=WP_000820764.1;gbkey=CDS;gene=eutP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311350.1;locus_tag=PHA55_RS17430;product=ethanolamine utilization acetate kinase EutP;protein_id=WP_000820764.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3563837	3564172	.	-	.	ID=gene-PHA55_RS17435;Name=eutS;gbkey=Gene;gene=eutS;gene_biotype=protein_coding;locus_tag=PHA55_RS17435;old_locus_tag=PHA55_17430
NZ_CP116044.1	Protein Homology	CDS	3563837	3564172	.	-	0	ID=cds-WP_000356956.1;Parent=gene-PHA55_RS17435;Dbxref=Genbank:WP_000356956.1;Name=WP_000356956.1;gbkey=CDS;gene=eutS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311351.2;locus_tag=PHA55_RS17435;product=ethanolamine utilization microcompartment protein EutS;protein_id=WP_000356956.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3564465	3566744	.	-	.	ID=gene-PHA55_RS17440;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=PHA55_RS17440;old_locus_tag=PHA55_17435
NZ_CP116044.1	Protein Homology	CDS	3564465	3566744	.	-	0	ID=cds-WP_000342642.1;Parent=gene-PHA55_RS17440;Dbxref=Genbank:WP_000342642.1;Name=WP_000342642.1;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708302.1;locus_tag=PHA55_RS17440;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=WP_000342642.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3567033	3567983	.	+	.	ID=gene-PHA55_RS17445;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=PHA55_RS17445;old_locus_tag=PHA55_17440
NZ_CP116044.1	Protein Homology	CDS	3567033	3567983	.	+	0	ID=cds-WP_001003709.1;Parent=gene-PHA55_RS17445;Dbxref=Genbank:WP_001003709.1;Name=WP_001003709.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;gene=tal;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311353.1;locus_tag=PHA55_RS17445;product=transaldolase;protein_id=WP_001003709.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3568003	3570006	.	+	.	ID=gene-PHA55_RS17450;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=PHA55_RS17450;old_locus_tag=PHA55_17445
NZ_CP116044.1	Protein Homology	CDS	3568003	3570006	.	+	0	ID=cds-WP_000087298.1;Parent=gene-PHA55_RS17450;Dbxref=Genbank:WP_000087298.1;Name=WP_000087298.1;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311354.1;locus_tag=PHA55_RS17450;product=transketolase;protein_id=WP_000087298.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3570082	3571125	.	-	.	ID=gene-PHA55_RS17455;Name=ypfG;gbkey=Gene;gene=ypfG;gene_biotype=protein_coding;locus_tag=PHA55_RS17455;old_locus_tag=PHA55_17450
NZ_CP116044.1	Protein Homology	CDS	3570082	3571125	.	-	0	ID=cds-WP_001270524.1;Parent=gene-PHA55_RS17455;Dbxref=Genbank:WP_001270524.1;Name=WP_001270524.1;gbkey=CDS;gene=ypfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311355.1;locus_tag=PHA55_RS17455;product=DUF1176 domain-containing protein;protein_id=WP_001270524.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3571251	3571826	.	-	.	ID=gene-PHA55_RS17460;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=PHA55_RS17460;old_locus_tag=PHA55_17455
NZ_CP116044.1	Protein Homology	CDS	3571251	3571826	.	-	0	ID=cds-WP_000193711.1;Parent=gene-PHA55_RS17460;Dbxref=Genbank:WP_000193711.1;Name=WP_000193711.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;gene=nudK;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311356.1;locus_tag=PHA55_RS17460;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_000193711.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3571894	3573873	.	-	.	ID=gene-PHA55_RS17465;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=protein_coding;locus_tag=PHA55_RS17465;old_locus_tag=PHA55_17460
NZ_CP116044.1	Protein Homology	CDS	3571894	3573873	.	-	0	ID=cds-WP_001078875.1;Parent=gene-PHA55_RS17465;Dbxref=Genbank:WP_001078875.1;Name=WP_001078875.1;Ontology_term=GO:0016491;gbkey=CDS;gene=aegA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416963.1;locus_tag=PHA55_RS17465;product=formate-dependent uric acid utilization protein AegA;protein_id=WP_001078875.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3574079	3575779	.	+	.	ID=gene-PHA55_RS17470;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=PHA55_RS17470;old_locus_tag=PHA55_17465
NZ_CP116044.1	Protein Homology	CDS	3574079	3575779	.	+	0	ID=cds-WP_000636129.1;Parent=gene-PHA55_RS17470;Dbxref=Genbank:WP_000636129.1;Name=WP_000636129.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narQ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416964.1;locus_tag=PHA55_RS17470;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=WP_000636129.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3575943	3579056	.	+	.	ID=gene-PHA55_RS17475;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=protein_coding;locus_tag=PHA55_RS17475;old_locus_tag=PHA55_17470
NZ_CP116044.1	Protein Homology	CDS	3575943	3579056	.	+	0	ID=cds-WP_001273136.1;Parent=gene-PHA55_RS17475;Dbxref=Genbank:WP_001273136.1;Name=WP_001273136.1;Ontology_term=GO:0042908,GO:0015562;gbkey=CDS;gene=acrD;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416965.1;locus_tag=PHA55_RS17475;product=multidrug efflux RND transporter permease AcrD;protein_id=WP_001273136.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3579155	3579214	.	-	.	ID=gene-PHA55_RS17480;Name=ypfM;gbkey=Gene;gene=ypfM;gene_biotype=protein_coding;locus_tag=PHA55_RS17480;old_locus_tag=PHA55_17475
NZ_CP116044.1	Protein Homology	CDS	3579155	3579214	.	-	0	ID=cds-WP_001386977.1;Parent=gene-PHA55_RS17480;Dbxref=Genbank:WP_001386977.1;Name=WP_001386977.1;gbkey=CDS;gene=ypfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165325.1;locus_tag=PHA55_RS17480;product=protein YpfM;protein_id=WP_001386977.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3579595	3579951	.	+	.	ID=gene-PHA55_RS17485;Name=yffB;gbkey=Gene;gene=yffB;gene_biotype=protein_coding;locus_tag=PHA55_RS17485;old_locus_tag=PHA55_17480
NZ_CP116044.1	Protein Homology	CDS	3579595	3579951	.	+	0	ID=cds-WP_000258247.1;Parent=gene-PHA55_RS17485;Dbxref=Genbank:WP_000258247.1;Name=WP_000258247.1;gbkey=CDS;gene=yffB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708309.1;locus_tag=PHA55_RS17485;product=ArsC family reductase;protein_id=WP_000258247.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3579955	3581082	.	+	.	ID=gene-PHA55_RS17490;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=PHA55_RS17490;old_locus_tag=PHA55_17485
NZ_CP116044.1	Protein Homology	CDS	3579955	3581082	.	+	0	ID=cds-WP_001277809.1;Parent=gene-PHA55_RS17490;Dbxref=Genbank:WP_001277809.1;Name=WP_001277809.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=PHA55_RS17490;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_001277809.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3581110	3581310	.	+	.	ID=gene-PHA55_RS17495;Name=ypfN;gbkey=Gene;gene=ypfN;gene_biotype=protein_coding;locus_tag=PHA55_RS17495;old_locus_tag=PHA55_17490
NZ_CP116044.1	Protein Homology	CDS	3581110	3581310	.	+	0	ID=cds-WP_000383836.1;Parent=gene-PHA55_RS17495;Dbxref=Genbank:WP_000383836.1;Name=WP_000383836.1;gbkey=CDS;gene=ypfN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588465.1;locus_tag=PHA55_RS17495;product=YpfN family protein;protein_id=WP_000383836.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3581420	3582118	.	-	.	ID=gene-PHA55_RS17500;Name=ypfH;gbkey=Gene;gene=ypfH;gene_biotype=protein_coding;locus_tag=PHA55_RS17500;old_locus_tag=PHA55_17495
NZ_CP116044.1	Protein Homology	CDS	3581420	3582118	.	-	0	ID=cds-WP_000679823.1;Parent=gene-PHA55_RS17500;Dbxref=Genbank:WP_000679823.1;Name=WP_000679823.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ypfH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416968.2;locus_tag=PHA55_RS17500;product=esterase;protein_id=WP_000679823.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3582192	3584207	.	-	.	ID=gene-PHA55_RS17505;Name=tmcA;gbkey=Gene;gene=tmcA;gene_biotype=protein_coding;locus_tag=PHA55_RS17505;old_locus_tag=PHA55_17500
NZ_CP116044.1	Protein Homology	CDS	3582192	3584207	.	-	0	ID=cds-WP_000829294.1;Parent=gene-PHA55_RS17505;Dbxref=Genbank:WP_000829294.1;Name=WP_000829294.1;gbkey=CDS;gene=tmcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311363.1;locus_tag=PHA55_RS17505;product=tRNA cytosine(34) acetyltransferase TmcA;protein_id=WP_000829294.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3584222	3585085	.	-	.	ID=gene-PHA55_RS17510;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=PHA55_RS17510;old_locus_tag=PHA55_17505
NZ_CP116044.1	Protein Homology	CDS	3584222	3585085	.	-	0	ID=cds-WP_001267498.1;Parent=gene-PHA55_RS17510;Dbxref=Genbank:WP_001267498.1;Name=WP_001267498.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311364.1;locus_tag=PHA55_RS17510;product=neutral zinc metallopeptidase;protein_id=WP_001267498.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3585232	3585630	.	-	.	ID=gene-PHA55_RS17515;Name=PHA55_RS17515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS17515;old_locus_tag=PHA55_17510
NZ_CP116044.1	Protein Homology	CDS	3585232	3585630	.	-	0	ID=cds-WP_000911329.1;Parent=gene-PHA55_RS17515;Dbxref=Genbank:WP_000911329.1;Name=WP_000911329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490590.1;locus_tag=PHA55_RS17515;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_000911329.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3585630	3585857	.	-	.	ID=gene-PHA55_RS17520;Name=vapB;gbkey=Gene;gene=vapB;gene_biotype=protein_coding;locus_tag=PHA55_RS17520;old_locus_tag=PHA55_17515
NZ_CP116044.1	Protein Homology	CDS	3585630	3585857	.	-	0	ID=cds-WP_000450524.1;Parent=gene-PHA55_RS17520;Dbxref=Genbank:WP_000450524.1;Name=WP_000450524.1;gbkey=CDS;gene=vapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858379.1;locus_tag=PHA55_RS17520;product=toxin-antitoxin system antitoxin VapB;protein_id=WP_000450524.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3586011	3586724	.	-	.	ID=gene-PHA55_RS17525;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=PHA55_RS17525;old_locus_tag=PHA55_17520
NZ_CP116044.1	Protein Homology	CDS	3586011	3586724	.	-	0	ID=cds-WP_001295467.1;Parent=gene-PHA55_RS17525;Dbxref=Genbank:WP_001295467.1;Name=WP_001295467.1;Ontology_term=GO:0009152,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=PHA55_RS17525;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_001295467.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3586937	3587971	.	-	.	ID=gene-PHA55_RS17530;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=PHA55_RS17530;old_locus_tag=PHA55_17525
NZ_CP116044.1	Protein Homology	CDS	3586937	3587971	.	-	0	ID=cds-WP_001297320.1;Parent=gene-PHA55_RS17530;Dbxref=Genbank:WP_001297320.1;Name=WP_001297320.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708316.2;locus_tag=PHA55_RS17530;product=outer membrane protein assembly factor BamC;protein_id=WP_001297320.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3587988	3588866	.	-	.	ID=gene-PHA55_RS17535;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=PHA55_RS17535;old_locus_tag=PHA55_17530
NZ_CP116044.1	Protein Homology	CDS	3587988	3588866	.	-	0	ID=cds-WP_001295469.1;Parent=gene-PHA55_RS17535;Dbxref=Genbank:WP_001295469.1;Name=WP_001295469.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=PHA55_RS17535;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_001295469.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3589012	3589584	.	+	.	ID=gene-PHA55_RS17540;Name=gcvR;gbkey=Gene;gene=gcvR;gene_biotype=protein_coding;locus_tag=PHA55_RS17540;old_locus_tag=PHA55_17535
NZ_CP116044.1	Protein Homology	CDS	3589012	3589584	.	+	0	ID=cds-WP_000176187.1;Parent=gene-PHA55_RS17540;Dbxref=Genbank:WP_000176187.1;Name=WP_000176187.1;gbkey=CDS;gene=gcvR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708318.1;locus_tag=PHA55_RS17540;product=glycine cleavage system transcriptional repressor;protein_id=WP_000176187.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3589584	3590054	.	+	.	ID=gene-PHA55_RS17545;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=PHA55_RS17545;old_locus_tag=PHA55_17540
NZ_CP116044.1	Protein Homology	CDS	3589584	3590054	.	+	0	ID=cds-WP_001068682.1;Parent=gene-PHA55_RS17545;Dbxref=Genbank:WP_001068682.1;Name=WP_001068682.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311369.1;locus_tag=PHA55_RS17545;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_001068682.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3590307	3590924	.	+	.	ID=gene-PHA55_RS17550;Name=hyfA;gbkey=Gene;gene=hyfA;gene_biotype=protein_coding;locus_tag=PHA55_RS17550;old_locus_tag=PHA55_17545
NZ_CP116044.1	Protein Homology	CDS	3590307	3590924	.	+	0	ID=cds-WP_001295470.1;Parent=gene-PHA55_RS17550;Dbxref=Genbank:WP_001295470.1;Name=WP_001295470.1;gbkey=CDS;gene=hyfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708320.1;locus_tag=PHA55_RS17550;product=hydrogenase 4 subunit HyfA;protein_id=WP_001295470.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	3591173	3592941	.	+	.	ID=gene-PHA55_RS17555;Name=hyfB;gbkey=Gene;gene=hyfB;gene_biotype=pseudogene;locus_tag=PHA55_RS17555;old_locus_tag=PHA55_17550;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	3591173	3592941	.	+	0	ID=cds-PHA55_RS17555;Parent=gene-PHA55_RS17555;Note=frameshifted;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hyfB;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: protein motif:HMM:NF012581.2;locus_tag=PHA55_RS17555;product=hydrogenase 4 subunit B;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	3592952	3593899	.	+	.	ID=gene-PHA55_RS17560;Name=hyfC;gbkey=Gene;gene=hyfC;gene_biotype=protein_coding;locus_tag=PHA55_RS17560;old_locus_tag=PHA55_17555
NZ_CP116044.1	Protein Homology	CDS	3592952	3593899	.	+	0	ID=cds-WP_001299052.1;Parent=gene-PHA55_RS17560;Dbxref=Genbank:WP_001299052.1;Name=WP_001299052.1;gbkey=CDS;gene=hyfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311372.2;locus_tag=PHA55_RS17560;product=hydrogenase 4 subunit HyfC;protein_id=WP_001299052.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	3593916	3595146	.	+	.	ID=gene-PHA55_RS17565;Name=PHA55_RS17565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS17565;old_locus_tag=PHA55_17560;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	3593916	3595146	.	+	0	ID=cds-PHA55_RS17565;Parent=gene-PHA55_RS17565;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708322.1;locus_tag=PHA55_RS17565;product=hydrogenase 4 subunit D;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	3595158	3595808	.	+	.	ID=gene-PHA55_RS17570;Name=hyfE;gbkey=Gene;gene=hyfE;gene_biotype=protein_coding;locus_tag=PHA55_RS17570;old_locus_tag=PHA55_17565
NZ_CP116044.1	Protein Homology	CDS	3595158	3595808	.	+	0	ID=cds-WP_000147987.1;Parent=gene-PHA55_RS17570;Dbxref=Genbank:WP_000147987.1;Name=WP_000147987.1;gbkey=CDS;gene=hyfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311374.1;locus_tag=PHA55_RS17570;product=hydrogenase 4 membrane subunit;protein_id=WP_000147987.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	3595813	3597393	.	+	.	ID=gene-PHA55_RS17575;Name=hyfF;gbkey=Gene;gene=hyfF;gene_biotype=pseudogene;locus_tag=PHA55_RS17575;old_locus_tag=PHA55_17570;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	3595813	3597393	.	+	0	ID=cds-PHA55_RS17575;Parent=gene-PHA55_RS17575;Note=internal stop;gbkey=CDS;gene=hyfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708324.1;locus_tag=PHA55_RS17575;product=hydrogenase 4 subunit F;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	3597383	3599098	.	+	.	ID=gene-PHA55_RS17580;Name=hyfG;gbkey=Gene;gene=hyfG;gene_biotype=protein_coding;locus_tag=PHA55_RS17580;old_locus_tag=PHA55_17575
NZ_CP116044.1	Protein Homology	CDS	3597383	3599098	.	+	0	ID=cds-WP_001102303.1;Parent=gene-PHA55_RS17580;Dbxref=Genbank:WP_001102303.1;Name=WP_001102303.1;gbkey=CDS;gene=hyfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416982.1;locus_tag=PHA55_RS17580;product=hydrogenase 4 catalytic subunit HyfG;protein_id=WP_001102303.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3599108	3599653	.	+	.	ID=gene-PHA55_RS17585;Name=hyfH;gbkey=Gene;gene=hyfH;gene_biotype=protein_coding;locus_tag=PHA55_RS17585;old_locus_tag=PHA55_17580
NZ_CP116044.1	Protein Homology	CDS	3599108	3599653	.	+	0	ID=cds-WP_000916051.1;Parent=gene-PHA55_RS17585;Dbxref=Genbank:WP_000916051.1;Name=WP_000916051.1;gbkey=CDS;gene=hyfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311377.1;locus_tag=PHA55_RS17585;product=hydrogenase 4 subunit H;protein_id=WP_000916051.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3599650	3600408	.	+	.	ID=gene-PHA55_RS17590;Name=hyfI;gbkey=Gene;gene=hyfI;gene_biotype=protein_coding;locus_tag=PHA55_RS17590;old_locus_tag=PHA55_17585
NZ_CP116044.1	Protein Homology	CDS	3599650	3600408	.	+	0	ID=cds-WP_000075542.1;Parent=gene-PHA55_RS17590;Dbxref=Genbank:WP_000075542.1;Name=WP_000075542.1;gbkey=CDS;gene=hyfI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000075566.1;locus_tag=PHA55_RS17590;product=hydrogenase 4 catalytic subunit HyfI;protein_id=WP_000075542.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3600401	3600814	.	+	.	ID=gene-PHA55_RS17595;Name=hyfJ;gbkey=Gene;gene=hyfJ;gene_biotype=protein_coding;locus_tag=PHA55_RS17595;old_locus_tag=PHA55_17590
NZ_CP116044.1	Protein Homology	CDS	3600401	3600814	.	+	0	ID=cds-WP_000796789.1;Parent=gene-PHA55_RS17595;Dbxref=Genbank:WP_000796789.1;Name=WP_000796789.1;gbkey=CDS;gene=hyfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416985.4;locus_tag=PHA55_RS17595;product=hydrogenase 4 assembly chaperone HyfJ;protein_id=WP_000796789.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3600844	3602856	.	+	.	ID=gene-PHA55_RS17600;Name=hyfR;gbkey=Gene;gene=hyfR;gene_biotype=protein_coding;locus_tag=PHA55_RS17600;old_locus_tag=PHA55_17595
NZ_CP116044.1	Protein Homology	CDS	3600844	3602856	.	+	0	ID=cds-WP_001251502.1;Parent=gene-PHA55_RS17600;Dbxref=Genbank:WP_001251502.1;Name=WP_001251502.1;gbkey=CDS;gene=hyfR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311380.2;locus_tag=PHA55_RS17600;product=DNA-binding transcriptional regulator HyfR;protein_id=WP_001251502.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	3602878	3603725	.	+	.	ID=gene-PHA55_RS17605;Name=focB;gbkey=Gene;gene=focB;gene_biotype=pseudogene;locus_tag=PHA55_RS17605;old_locus_tag=PHA55_17600;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	3602878	3603725	.	+	0	ID=cds-PHA55_RS17605;Parent=gene-PHA55_RS17605;Note=frameshifted;gbkey=CDS;gene=focB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311381.1;locus_tag=PHA55_RS17605;product=formate transporter FocB;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	3603763	3604824	.	-	.	ID=gene-PHA55_RS17610;Name=yfgO;gbkey=Gene;gene=yfgO;gene_biotype=protein_coding;locus_tag=PHA55_RS17610;old_locus_tag=PHA55_17605
NZ_CP116044.1	Protein Homology	CDS	3603763	3604824	.	-	0	ID=cds-WP_000892044.1;Parent=gene-PHA55_RS17610;Dbxref=Genbank:WP_000892044.1;Name=WP_000892044.1;gbkey=CDS;gene=yfgO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311382.1;locus_tag=PHA55_RS17610;product=AI-2E family transporter;protein_id=WP_000892044.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3605037	3606500	.	+	.	ID=gene-PHA55_RS17615;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=PHA55_RS17615;old_locus_tag=PHA55_17610
NZ_CP116044.1	Protein Homology	CDS	3605037	3606500	.	+	0	ID=cds-WP_000489667.1;Parent=gene-PHA55_RS17615;Dbxref=Genbank:WP_000489667.1;Name=WP_000489667.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416989.1;locus_tag=PHA55_RS17615;product=beta-barrel assembly-enhancing protease;protein_id=WP_000489667.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3606521	3606880	.	+	.	ID=gene-PHA55_RS17620;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=PHA55_RS17620;old_locus_tag=PHA55_17615
NZ_CP116044.1	Protein Homology	CDS	3606521	3606880	.	+	0	ID=cds-WP_000166449.1;Parent=gene-PHA55_RS17620;Dbxref=Genbank:WP_000166449.1;Name=WP_000166449.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311384.1;locus_tag=PHA55_RS17620;product=arsenate reductase (glutaredoxin);protein_id=WP_000166449.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3607018	3607719	.	-	.	ID=gene-PHA55_RS17625;Name=hda;gbkey=Gene;gene=hda;gene_biotype=protein_coding;locus_tag=PHA55_RS17625;old_locus_tag=PHA55_17620
NZ_CP116044.1	Protein Homology	CDS	3607018	3607719	.	-	0	ID=cds-WP_001307333.1;Parent=gene-PHA55_RS17625;Dbxref=Genbank:WP_001307333.1;Name=WP_001307333.1;gbkey=CDS;gene=hda;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416991.2;locus_tag=PHA55_RS17625;product=DnaA inactivator Hda;protein_id=WP_001307333.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3607814	3609103	.	-	.	ID=gene-PHA55_RS17630;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=PHA55_RS17630;old_locus_tag=PHA55_17625
NZ_CP116044.1	Protein Homology	CDS	3607814	3609103	.	-	0	ID=cds-WP_000198328.1;Parent=gene-PHA55_RS17630;Dbxref=Genbank:WP_000198328.1;Name=WP_000198328.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311386.1;locus_tag=PHA55_RS17630;product=uracil permease;protein_id=WP_000198328.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3609189	3609815	.	-	.	ID=gene-PHA55_RS17635;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=PHA55_RS17635;old_locus_tag=PHA55_17630
NZ_CP116044.1	Protein Homology	CDS	3609189	3609815	.	-	0	ID=cds-WP_001295473.1;Parent=gene-PHA55_RS17635;Dbxref=Genbank:WP_001295473.1;Name=WP_001295473.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=PHA55_RS17635;product=uracil phosphoribosyltransferase;protein_id=WP_001295473.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3610140	3611177	.	+	.	ID=gene-PHA55_RS17640;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=PHA55_RS17640;old_locus_tag=PHA55_17635
NZ_CP116044.1	Protein Homology	CDS	3610140	3611177	.	+	0	ID=cds-WP_001295474.1;Parent=gene-PHA55_RS17640;Dbxref=Genbank:WP_001295474.1;Name=WP_001295474.1;Ontology_term=GO:0006189,GO:0009152,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311388.1;locus_tag=PHA55_RS17640;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_001295474.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3611177	3611815	.	+	.	ID=gene-PHA55_RS17645;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=PHA55_RS17645;old_locus_tag=PHA55_17640
NZ_CP116044.1	Protein Homology	CDS	3611177	3611815	.	+	0	ID=cds-WP_001028614.1;Parent=gene-PHA55_RS17645;Dbxref=Genbank:WP_001028614.1;Name=WP_001028614.1;Ontology_term=GO:0009152,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708338.1;locus_tag=PHA55_RS17645;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_001028614.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3611986	3614052	.	+	.	ID=gene-PHA55_RS17650;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=PHA55_RS17650;old_locus_tag=PHA55_17645
NZ_CP116044.1	Protein Homology	CDS	3611986	3614052	.	+	0	ID=cds-WP_000529576.1;Parent=gene-PHA55_RS17650;Dbxref=Genbank:WP_000529576.1;Name=WP_000529576.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311390.1;locus_tag=PHA55_RS17650;product=polyphosphate kinase 1;protein_id=WP_000529576.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3614057	3615598	.	+	.	ID=gene-PHA55_RS17655;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=PHA55_RS17655;old_locus_tag=PHA55_17650
NZ_CP116044.1	Protein Homology	CDS	3614057	3615598	.	+	0	ID=cds-WP_001121363.1;Parent=gene-PHA55_RS17655;Dbxref=Genbank:WP_001121363.1;Name=WP_001121363.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311391.1;locus_tag=PHA55_RS17655;product=exopolyphosphatase;protein_id=WP_001121363.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3615637	3617880	.	-	.	ID=gene-PHA55_RS17660;Name=pdeF;gbkey=Gene;gene=pdeF;gene_biotype=protein_coding;locus_tag=PHA55_RS17660;old_locus_tag=PHA55_17655
NZ_CP116044.1	Protein Homology	CDS	3615637	3617880	.	-	0	ID=cds-WP_000772728.1;Parent=gene-PHA55_RS17660;Dbxref=Genbank:WP_000772728.1;Name=WP_000772728.1;gbkey=CDS;gene=pdeF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416998.1;locus_tag=PHA55_RS17660;product=cyclic-guanylate-specific phosphodiesterase PdeF;protein_id=WP_000772728.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3618062	3618214	.	-	.	ID=gene-PHA55_RS17665;Name=PHA55_RS17665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS17665;old_locus_tag=PHA55_17660
NZ_CP116044.1	Protein Homology	CDS	3618062	3618214	.	-	0	ID=cds-WP_000017552.1;Parent=gene-PHA55_RS17665;Dbxref=Genbank:WP_000017552.1;Name=WP_000017552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439271.1;locus_tag=PHA55_RS17665;product=hypothetical protein;protein_id=WP_000017552.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3618232	3618423	.	+	.	ID=gene-PHA55_RS17670;Name=yfgG;gbkey=Gene;gene=yfgG;gene_biotype=protein_coding;locus_tag=PHA55_RS17670;old_locus_tag=PHA55_17665
NZ_CP116044.1	Protein Homology	CDS	3618232	3618423	.	+	0	ID=cds-WP_000076001.1;Parent=gene-PHA55_RS17670;Dbxref=Genbank:WP_000076001.1;Name=WP_000076001.1;gbkey=CDS;gene=yfgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416999.1;locus_tag=PHA55_RS17670;product=YfgG family protein;protein_id=WP_000076001.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3618734	3619252	.	+	.	ID=gene-PHA55_RS17675;Name=yfgH;gbkey=Gene;gene=yfgH;gene_biotype=protein_coding;locus_tag=PHA55_RS17675;old_locus_tag=PHA55_17670
NZ_CP116044.1	Protein Homology	CDS	3618734	3619252	.	+	0	ID=cds-WP_001295476.1;Parent=gene-PHA55_RS17675;Dbxref=Genbank:WP_001295476.1;Name=WP_001295476.1;Ontology_term=GO:0019867;gbkey=CDS;gene=yfgH;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417000.1;locus_tag=PHA55_RS17675;product=glycine zipper 2TM domain-containing protein;protein_id=WP_001295476.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3619268	3619807	.	+	.	ID=gene-PHA55_RS17680;Name=yfgI;gbkey=Gene;gene=yfgI;gene_biotype=protein_coding;locus_tag=PHA55_RS17680;old_locus_tag=PHA55_17675
NZ_CP116044.1	Protein Homology	CDS	3619268	3619807	.	+	0	ID=cds-WP_000755173.1;Parent=gene-PHA55_RS17680;Dbxref=Genbank:WP_000755173.1;Name=WP_000755173.1;gbkey=CDS;gene=yfgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417001.1;locus_tag=PHA55_RS17680;product=DUF5384 family protein;protein_id=WP_000755173.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3619902	3621479	.	-	.	ID=gene-PHA55_RS17685;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=PHA55_RS17685;old_locus_tag=PHA55_17680
NZ_CP116044.1	Protein Homology	CDS	3619902	3621479	.	-	0	ID=cds-WP_000138282.1;Parent=gene-PHA55_RS17685;Dbxref=Genbank:WP_000138282.1;Name=WP_000138282.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=PHA55_RS17685;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_000138282.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3621548	3623014	.	-	.	ID=gene-PHA55_RS17690;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=PHA55_RS17690;old_locus_tag=PHA55_17685
NZ_CP116044.1	Protein Homology	CDS	3621548	3623014	.	-	0	ID=cds-WP_001299507.1;Parent=gene-PHA55_RS17690;Dbxref=Genbank:WP_001299507.1;Name=WP_001299507.1;Ontology_term=GO:0009152,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151980.1;locus_tag=PHA55_RS17690;product=IMP dehydrogenase;protein_id=WP_001299507.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3623176	3624546	.	+	.	ID=gene-PHA55_RS17695;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=PHA55_RS17695;old_locus_tag=PHA55_17690
NZ_CP116044.1	Protein Homology	CDS	3623176	3624546	.	+	0	ID=cds-WP_000937933.1;Parent=gene-PHA55_RS17695;Dbxref=Genbank:WP_000937933.1;Name=WP_000937933.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417004.1;locus_tag=PHA55_RS17695;product=exodeoxyribonuclease VII large subunit;protein_id=WP_000937933.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3624543	3624758	.	-	.	ID=gene-PHA55_RS17700;Name=yfgJ;gbkey=Gene;gene=yfgJ;gene_biotype=protein_coding;locus_tag=PHA55_RS17700;old_locus_tag=PHA55_17695
NZ_CP116044.1	Protein Homology	CDS	3624543	3624758	.	-	0	ID=cds-WP_001341622.1;Parent=gene-PHA55_RS17700;Dbxref=Genbank:WP_001341622.1;Name=WP_001341622.1;gbkey=CDS;gene=yfgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417005.2;locus_tag=PHA55_RS17700;product=zinc ribbon domain-containing protein;protein_id=WP_001341622.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3624827	3626299	.	-	.	ID=gene-PHA55_RS17705;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=PHA55_RS17705;old_locus_tag=PHA55_17700
NZ_CP116044.1	Protein Homology	CDS	3624827	3626299	.	-	0	ID=cds-WP_000249410.1;Parent=gene-PHA55_RS17705;Dbxref=Genbank:WP_000249410.1;Name=WP_000249410.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417006.2;locus_tag=PHA55_RS17705;product=ribosome biogenesis GTPase Der;protein_id=WP_000249410.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3626417	3627595	.	-	.	ID=gene-PHA55_RS17710;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=PHA55_RS17710;old_locus_tag=PHA55_17705
NZ_CP116044.1	Protein Homology	CDS	3626417	3627595	.	-	0	ID=cds-WP_001177037.1;Parent=gene-PHA55_RS17710;Dbxref=Genbank:WP_001177037.1;Name=WP_001177037.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311401.1;locus_tag=PHA55_RS17710;product=outer membrane protein assembly factor BamB;protein_id=WP_001177037.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3627606	3628226	.	-	.	ID=gene-PHA55_RS17715;Name=yfgM;gbkey=Gene;gene=yfgM;gene_biotype=protein_coding;locus_tag=PHA55_RS17715;old_locus_tag=PHA55_17710
NZ_CP116044.1	Protein Homology	CDS	3627606	3628226	.	-	0	ID=cds-WP_000409205.1;Parent=gene-PHA55_RS17715;Dbxref=Genbank:WP_000409205.1;Name=WP_000409205.1;gbkey=CDS;gene=yfgM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417008.1;locus_tag=PHA55_RS17715;product=ancillary SecYEG translocon subunit YfgM;protein_id=WP_000409205.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3628244	3629518	.	-	.	ID=gene-PHA55_RS17720;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=PHA55_RS17720;old_locus_tag=PHA55_17715
NZ_CP116044.1	Protein Homology	CDS	3628244	3629518	.	-	0	ID=cds-WP_001107167.1;Parent=gene-PHA55_RS17720;Dbxref=Genbank:WP_001107167.1;Name=WP_001107167.1;Ontology_term=GO:0006427,GO:0004821,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311403.1;locus_tag=PHA55_RS17720;product=histidine--tRNA ligase;protein_id=WP_001107167.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3629629	3630747	.	-	.	ID=gene-PHA55_RS17725;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=PHA55_RS17725;old_locus_tag=PHA55_17720
NZ_CP116044.1	Protein Homology	CDS	3629629	3630747	.	-	0	ID=cds-WP_000551818.1;Parent=gene-PHA55_RS17725;Dbxref=Genbank:WP_000551818.1;Name=WP_000551818.1;Ontology_term=GO:0044237,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity|0046429||IEA;go_process=cellular metabolic process|0044237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311404.1;locus_tag=PHA55_RS17725;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_000551818.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3630774	3631787	.	-	.	ID=gene-PHA55_RS17730;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=PHA55_RS17730;old_locus_tag=PHA55_17725
NZ_CP116044.1	Protein Homology	CDS	3630774	3631787	.	-	0	ID=cds-WP_001090850.1;Parent=gene-PHA55_RS17730;Dbxref=Genbank:WP_001090850.1;Name=WP_001090850.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708355.1;locus_tag=PHA55_RS17730;product=cytoskeleton protein RodZ;protein_id=WP_001090850.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3632072	3633226	.	-	.	ID=gene-PHA55_RS17735;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=PHA55_RS17735;old_locus_tag=PHA55_17730
NZ_CP116044.1	Protein Homology	CDS	3632072	3633226	.	-	0	ID=cds-WP_000003317.1;Parent=gene-PHA55_RS17735;Dbxref=Genbank:WP_000003317.1;Name=WP_000003317.1;gbkey=CDS;gene=rlmN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417012.1;locus_tag=PHA55_RS17735;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;protein_id=WP_000003317.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3633376	3633807	.	-	.	ID=gene-PHA55_RS17740;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=PHA55_RS17740;old_locus_tag=PHA55_17735
NZ_CP116044.1	Protein Homology	CDS	3633376	3633807	.	-	0	ID=cds-WP_000963837.1;Parent=gene-PHA55_RS17740;Dbxref=Genbank:WP_000963837.1;Name=WP_000963837.1;Ontology_term=GO:0006165,GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;go_process=nucleoside diphosphate phosphorylation|0006165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311407.1;locus_tag=PHA55_RS17740;product=nucleoside-diphosphate kinase;protein_id=WP_000963837.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3633956	3636268	.	-	.	ID=gene-PHA55_RS17745;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=PHA55_RS17745;old_locus_tag=PHA55_17740
NZ_CP116044.1	Protein Homology	CDS	3633956	3636268	.	-	0	ID=cds-WP_001137682.1;Parent=gene-PHA55_RS17745;Dbxref=Genbank:WP_001137682.1;Name=WP_001137682.1;Note=penicillin-binding protein 1C;Ontology_term=GO:0009252,GO:0008658,GO:0008955;gbkey=CDS;gene=pbpC;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417014.1;locus_tag=PHA55_RS17745;product=peptidoglycan glycosyltransferase PbpC;protein_id=WP_001137682.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3636269	3641230	.	-	.	ID=gene-PHA55_RS17750;Name=yfhM;gbkey=Gene;gene=yfhM;gene_biotype=protein_coding;locus_tag=PHA55_RS17750;old_locus_tag=PHA55_17745
NZ_CP116044.1	Protein Homology	CDS	3636269	3641230	.	-	0	ID=cds-WP_000736307.1;Parent=gene-PHA55_RS17750;Dbxref=Genbank:WP_000736307.1;Name=WP_000736307.1;gbkey=CDS;gene=yfhM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417015.1;locus_tag=PHA55_RS17750;product=alpha2-macroglobulin;protein_id=WP_000736307.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3641437	3642282	.	+	.	ID=gene-PHA55_RS17755;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=PHA55_RS17755;old_locus_tag=PHA55_17750
NZ_CP116044.1	Protein Homology	CDS	3641437	3642282	.	+	0	ID=cds-WP_000108626.1;Parent=gene-PHA55_RS17755;Dbxref=Genbank:WP_000108626.1;Name=WP_000108626.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417016.4;locus_tag=PHA55_RS17755;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_000108626.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3642618	3642743	.	+	.	ID=gene-PHA55_RS17760;Name=timP;gbkey=Gene;gene=timP;gene_biotype=protein_coding;locus_tag=PHA55_RS17760;old_locus_tag=PHA55_17755
NZ_CP116044.1	Protein Homology	CDS	3642618	3642743	.	+	0	ID=cds-WP_001385884.1;Parent=gene-PHA55_RS17760;Dbxref=Genbank:WP_001385884.1;Name=WP_001385884.1;gbkey=CDS;gene=timP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010283914.1;locus_tag=PHA55_RS17760;product=small toxic inner membrane protein TimP;protein_id=WP_001385884.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3642775	3643551	.	-	.	ID=gene-PHA55_RS17765;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=PHA55_RS17765;old_locus_tag=PHA55_17760
NZ_CP116044.1	Protein Homology	CDS	3642775	3643551	.	-	0	ID=cds-WP_001299505.1;Parent=gene-PHA55_RS17765;Dbxref=Genbank:WP_001299505.1;Name=WP_001299505.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708361.2;locus_tag=PHA55_RS17765;product=enhanced serine sensitivity protein SseB;protein_id=WP_001299505.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3643693	3644976	.	-	.	ID=gene-PHA55_RS17770;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=PHA55_RS17770;old_locus_tag=PHA55_17765
NZ_CP116044.1	Protein Homology	CDS	3643693	3644976	.	-	0	ID=cds-WP_000133582.1;Parent=gene-PHA55_RS17770;Dbxref=Genbank:WP_000133582.1;Name=WP_000133582.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311416.2;locus_tag=PHA55_RS17770;product=aminopeptidase PepB;protein_id=WP_000133582.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3645154	3645354	.	-	.	ID=gene-PHA55_RS17775;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=PHA55_RS17775;old_locus_tag=PHA55_17770
NZ_CP116044.1	Protein Homology	CDS	3645154	3645354	.	-	0	ID=cds-WP_000523616.1;Parent=gene-PHA55_RS17775;Dbxref=Genbank:WP_000523616.1;Name=WP_000523616.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=PHA55_RS17775;product=Fe-S cluster assembly protein IscX;protein_id=WP_000523616.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3645366	3645701	.	-	.	ID=gene-PHA55_RS17780;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=PHA55_RS17780;old_locus_tag=PHA55_17775
NZ_CP116044.1	Protein Homology	CDS	3645366	3645701	.	-	0	ID=cds-WP_001124469.1;Parent=gene-PHA55_RS17780;Dbxref=Genbank:WP_001124469.1;Name=WP_001124469.1;Ontology_term=GO:0016226;gbkey=CDS;gene=fdx;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=PHA55_RS17780;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_001124469.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3645703	3647553	.	-	.	ID=gene-PHA55_RS17785;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=PHA55_RS17785;old_locus_tag=PHA55_17780
NZ_CP116044.1	Protein Homology	CDS	3645703	3647553	.	-	0	ID=cds-WP_001196613.1;Parent=gene-PHA55_RS17785;Dbxref=Genbank:WP_001196613.1;Name=WP_001196613.1;Ontology_term=GO:0006457,GO:0005515;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=PHA55_RS17785;product=Fe-S protein assembly chaperone HscA;protein_id=WP_001196613.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3647570	3648085	.	-	.	ID=gene-PHA55_RS17790;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=PHA55_RS17790;old_locus_tag=PHA55_17785
NZ_CP116044.1	Protein Homology	CDS	3647570	3648085	.	-	0	ID=cds-WP_000384411.1;Parent=gene-PHA55_RS17790;Dbxref=Genbank:WP_000384411.1;Name=WP_000384411.1;Ontology_term=GO:0097428,GO:0051087;gbkey=CDS;gene=hscB;go_function=chaperone binding|0051087||IEA;go_process=protein maturation by iron-sulfur cluster transfer|0097428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311420.1;locus_tag=PHA55_RS17790;product=co-chaperone HscB;protein_id=WP_000384411.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3648181	3648504	.	-	.	ID=gene-PHA55_RS17795;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=PHA55_RS17795;old_locus_tag=PHA55_17790
NZ_CP116044.1	Protein Homology	CDS	3648181	3648504	.	-	0	ID=cds-WP_000028953.1;Parent=gene-PHA55_RS17795;Dbxref=Genbank:WP_000028953.1;Name=WP_000028953.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311421.1;locus_tag=PHA55_RS17795;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_000028953.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3648521	3648907	.	-	.	ID=gene-PHA55_RS17800;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=PHA55_RS17800;old_locus_tag=PHA55_17795
NZ_CP116044.1	Protein Homology	CDS	3648521	3648907	.	-	0	ID=cds-WP_000331707.1;Parent=gene-PHA55_RS17800;Dbxref=Genbank:WP_000331707.1;Name=WP_000331707.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=PHA55_RS17800;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_000331707.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3648935	3650149	.	-	.	ID=gene-PHA55_RS17805;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=PHA55_RS17805;old_locus_tag=PHA55_17800
NZ_CP116044.1	Protein Homology	CDS	3648935	3650149	.	-	0	ID=cds-WP_001295373.1;Parent=gene-PHA55_RS17805;Dbxref=Genbank:WP_001295373.1;Name=WP_001295373.1;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=PHA55_RS17805;product=cysteine desulfurase;protein_id=WP_001295373.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3650261	3650749	.	-	.	ID=gene-PHA55_RS17810;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=PHA55_RS17810;old_locus_tag=PHA55_17805
NZ_CP116044.1	Protein Homology	CDS	3650261	3650749	.	-	0	ID=cds-WP_001241356.1;Parent=gene-PHA55_RS17810;Dbxref=Genbank:WP_001241356.1;Name=WP_001241356.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913993.1;locus_tag=PHA55_RS17810;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_001241356.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3651050	3651787	.	-	.	ID=gene-PHA55_RS17815;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=PHA55_RS17815;old_locus_tag=PHA55_17810
NZ_CP116044.1	Protein Homology	CDS	3651050	3651787	.	-	0	ID=cds-WP_000940018.1;Parent=gene-PHA55_RS17815;Dbxref=Genbank:WP_000940018.1;Name=WP_000940018.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311425.1;locus_tag=PHA55_RS17815;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_000940018.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3651906	3652709	.	+	.	ID=gene-PHA55_RS17820;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=PHA55_RS17820;old_locus_tag=PHA55_17815
NZ_CP116044.1	Protein Homology	CDS	3651906	3652709	.	+	0	ID=cds-WP_000553451.1;Parent=gene-PHA55_RS17820;Dbxref=Genbank:WP_000553451.1;Name=WP_000553451.1;Ontology_term=GO:0046854,GO:0046855,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA,inositol phosphate dephosphorylation|0046855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=PHA55_RS17820;product=inositol-1-monophosphatase;protein_id=WP_000553451.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3652854	3653708	.	+	.	ID=gene-PHA55_RS17825;Name=yfhR;gbkey=Gene;gene=yfhR;gene_biotype=protein_coding;locus_tag=PHA55_RS17825;old_locus_tag=PHA55_17820
NZ_CP116044.1	Protein Homology	CDS	3652854	3653708	.	+	0	ID=cds-WP_001440790.1;Parent=gene-PHA55_RS17825;Dbxref=Genbank:WP_001440790.1;Name=WP_001440790.1;gbkey=CDS;gene=yfhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311427.2;locus_tag=PHA55_RS17825;product=alpha/beta hydrolase;protein_id=WP_001440790.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3653899	3655179	.	+	.	ID=gene-PHA55_RS17830;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=PHA55_RS17830;old_locus_tag=PHA55_17825
NZ_CP116044.1	Protein Homology	CDS	3653899	3655179	.	+	0	ID=cds-WP_000983009.1;Parent=gene-PHA55_RS17830;Dbxref=Genbank:WP_000983009.1;Name=WP_000983009.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417030.2;locus_tag=PHA55_RS17830;product=stationary phase inducible protein CsiE;protein_id=WP_000983009.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3655171	3656310	.	-	.	ID=gene-PHA55_RS17835;Name=hcaT;gbkey=Gene;gene=hcaT;gene_biotype=protein_coding;locus_tag=PHA55_RS17835;old_locus_tag=PHA55_17830
NZ_CP116044.1	Protein Homology	CDS	3655171	3656310	.	-	0	ID=cds-WP_000244193.1;Parent=gene-PHA55_RS17835;Dbxref=Genbank:WP_000244193.1;Name=WP_000244193.1;gbkey=CDS;gene=hcaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417031.1;locus_tag=PHA55_RS17835;product=3-phenylpropionate MFS transporter;protein_id=WP_000244193.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3656470	3657360	.	-	.	ID=gene-PHA55_RS17840;Name=hcaR;gbkey=Gene;gene=hcaR;gene_biotype=protein_coding;locus_tag=PHA55_RS17840;old_locus_tag=PHA55_17835
NZ_CP116044.1	Protein Homology	CDS	3656470	3657360	.	-	0	ID=cds-WP_000423256.1;Parent=gene-PHA55_RS17840;Dbxref=Genbank:WP_000423256.1;Name=WP_000423256.1;gbkey=CDS;gene=hcaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311430.1;locus_tag=PHA55_RS17840;product=DNA-binding transcriptional regulator HcaR;protein_id=WP_000423256.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3657496	3658857	.	+	.	ID=gene-PHA55_RS17845;Name=hcaE;gbkey=Gene;gene=hcaE;gene_biotype=protein_coding;locus_tag=PHA55_RS17845;old_locus_tag=PHA55_17840
NZ_CP116044.1	Protein Homology	CDS	3657496	3658857	.	+	0	ID=cds-WP_000211172.1;Parent=gene-PHA55_RS17845;Dbxref=Genbank:WP_000211172.1;Name=WP_000211172.1;gbkey=CDS;gene=hcaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311431.1;locus_tag=PHA55_RS17845;product=aromatic ring-hydroxylating dioxygenase subunit alpha;protein_id=WP_000211172.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3658854	3659372	.	+	.	ID=gene-PHA55_RS17850;Name=hcaF;gbkey=Gene;gene=hcaF;gene_biotype=protein_coding;locus_tag=PHA55_RS17850;old_locus_tag=PHA55_17845
NZ_CP116044.1	Protein Homology	CDS	3658854	3659372	.	+	0	ID=cds-WP_001276072.1;Parent=gene-PHA55_RS17850;Dbxref=Genbank:WP_001276072.1;Name=WP_001276072.1;gbkey=CDS;gene=hcaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417034.1;locus_tag=PHA55_RS17850;product=3-phenylpropionate/cinnamic acid dioxygenase subunit beta;protein_id=WP_001276072.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3659372	3659692	.	+	.	ID=gene-PHA55_RS17855;Name=hcaC;gbkey=Gene;gene=hcaC;gene_biotype=protein_coding;locus_tag=PHA55_RS17855;old_locus_tag=PHA55_17850
NZ_CP116044.1	Protein Homology	CDS	3659372	3659692	.	+	0	ID=cds-WP_001080102.1;Parent=gene-PHA55_RS17855;Dbxref=Genbank:WP_001080102.1;Name=WP_001080102.1;Ontology_term=GO:0051537;gbkey=CDS;gene=hcaC;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311433.1;locus_tag=PHA55_RS17855;product=bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit;protein_id=WP_001080102.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3659689	3660501	.	+	.	ID=gene-PHA55_RS17860;Name=hcaB;gbkey=Gene;gene=hcaB;gene_biotype=protein_coding;gene_synonym=phdD,yfhX;locus_tag=PHA55_RS17860;old_locus_tag=PHA55_17855
NZ_CP116044.1	Protein Homology	CDS	3659689	3660501	.	+	0	ID=cds-WP_001281377.1;Parent=gene-PHA55_RS17860;Dbxref=Genbank:WP_001281377.1;Name=WP_001281377.1;gbkey=CDS;gene=hcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311434.1;locus_tag=PHA55_RS17860;product=3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase;protein_id=WP_001281377.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3660511	3661713	.	+	.	ID=gene-PHA55_RS17865;Name=hcaD;gbkey=Gene;gene=hcaD;gene_biotype=protein_coding;locus_tag=PHA55_RS17865;old_locus_tag=PHA55_17860
NZ_CP116044.1	Protein Homology	CDS	3660511	3661713	.	+	0	ID=cds-WP_000660797.1;Parent=gene-PHA55_RS17865;Dbxref=Genbank:WP_000660797.1;Name=WP_000660797.1;gbkey=CDS;gene=hcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417037.1;locus_tag=PHA55_RS17865;product=phenylpropionate dioxygenase ferredoxin reductase subunit;protein_id=WP_000660797.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3661810	3662232	.	+	.	ID=gene-PHA55_RS17870;Name=yphA;gbkey=Gene;gene=yphA;gene_biotype=protein_coding;locus_tag=PHA55_RS17870;old_locus_tag=PHA55_17865
NZ_CP116044.1	Protein Homology	CDS	3661810	3662232	.	+	0	ID=cds-WP_001094726.1;Parent=gene-PHA55_RS17870;Dbxref=Genbank:WP_001094726.1;Name=WP_001094726.1;gbkey=CDS;gene=yphA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417038.4;locus_tag=PHA55_RS17870;product=DoxX family protein;protein_id=WP_001094726.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3662280	3663152	.	-	.	ID=gene-PHA55_RS17875;Name=yphB;gbkey=Gene;gene=yphB;gene_biotype=protein_coding;locus_tag=PHA55_RS17875;old_locus_tag=PHA55_17870
NZ_CP116044.1	Protein Homology	CDS	3662280	3663152	.	-	0	ID=cds-WP_000158548.1;Parent=gene-PHA55_RS17875;Dbxref=Genbank:WP_000158548.1;Name=WP_000158548.1;gbkey=CDS;gene=yphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417039.1;locus_tag=PHA55_RS17875;product=aldose 1-epimerase;protein_id=WP_000158548.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3663164	3664258	.	-	.	ID=gene-PHA55_RS17880;Name=yphC;gbkey=Gene;gene=yphC;gene_biotype=protein_coding;locus_tag=PHA55_RS17880;old_locus_tag=PHA55_17875
NZ_CP116044.1	Protein Homology	CDS	3663164	3664258	.	-	0	ID=cds-WP_000700800.1;Parent=gene-PHA55_RS17880;Dbxref=Genbank:WP_000700800.1;Name=WP_000700800.1;gbkey=CDS;gene=yphC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708383.1;locus_tag=PHA55_RS17880;product=zinc-binding dehydrogenase;protein_id=WP_000700800.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3664291	3665289	.	-	.	ID=gene-PHA55_RS17885;Name=yphD;gbkey=Gene;gene=yphD;gene_biotype=protein_coding;locus_tag=PHA55_RS17885;old_locus_tag=PHA55_17880
NZ_CP116044.1	Protein Homology	CDS	3664291	3665289	.	-	0	ID=cds-WP_001276663.1;Parent=gene-PHA55_RS17885;Dbxref=Genbank:WP_001276663.1;Name=WP_001276663.1;gbkey=CDS;gene=yphD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417041.1;locus_tag=PHA55_RS17885;product=ABC transporter permease;protein_id=WP_001276663.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3665314	3666825	.	-	.	ID=gene-PHA55_RS17890;Name=yphE;gbkey=Gene;gene=yphE;gene_biotype=protein_coding;locus_tag=PHA55_RS17890;old_locus_tag=PHA55_17885
NZ_CP116044.1	Protein Homology	CDS	3665314	3666825	.	-	0	ID=cds-WP_000493473.1;Parent=gene-PHA55_RS17890;Dbxref=Genbank:WP_000493473.1;Name=WP_000493473.1;gbkey=CDS;gene=yphE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708385.1;locus_tag=PHA55_RS17890;product=sugar ABC transporter ATP-binding protein;protein_id=WP_000493473.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3666848	3667831	.	-	.	ID=gene-PHA55_RS17895;Name=yphF;gbkey=Gene;gene=yphF;gene_biotype=protein_coding;locus_tag=PHA55_RS17895;old_locus_tag=PHA55_17890
NZ_CP116044.1	Protein Homology	CDS	3666848	3667831	.	-	0	ID=cds-WP_001124894.1;Parent=gene-PHA55_RS17895;Dbxref=Genbank:WP_001124894.1;Name=WP_001124894.1;gbkey=CDS;gene=yphF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311441.1;locus_tag=PHA55_RS17895;product=substrate-binding domain-containing protein;protein_id=WP_001124894.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3667928	3671209	.	-	.	ID=gene-PHA55_RS17900;Name=yphG;gbkey=Gene;gene=yphG;gene_biotype=protein_coding;locus_tag=PHA55_RS17900;old_locus_tag=PHA55_17895
NZ_CP116044.1	Protein Homology	CDS	3667928	3671209	.	-	0	ID=cds-WP_001441321.1;Parent=gene-PHA55_RS17900;Dbxref=Genbank:WP_001441321.1;Name=WP_001441321.1;gbkey=CDS;gene=yphG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417044.4;locus_tag=PHA55_RS17900;product=DUF5107 domain-containing protein;protein_id=WP_001441321.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3671327	3672520	.	+	.	ID=gene-PHA55_RS17905;Name=yphH;gbkey=Gene;gene=yphH;gene_biotype=protein_coding;locus_tag=PHA55_RS17905;old_locus_tag=PHA55_17900
NZ_CP116044.1	Protein Homology	CDS	3671327	3672520	.	+	0	ID=cds-WP_001299519.1;Parent=gene-PHA55_RS17905;Dbxref=Genbank:WP_001299519.1;Name=WP_001299519.1;gbkey=CDS;gene=yphH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311443.2;locus_tag=PHA55_RS17905;product=ROK family protein;protein_id=WP_001299519.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3672584	3673837	.	-	.	ID=gene-PHA55_RS17910;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=PHA55_RS17910;old_locus_tag=PHA55_17905
NZ_CP116044.1	Protein Homology	CDS	3672584	3673837	.	-	0	ID=cds-WP_000919159.1;Parent=gene-PHA55_RS17910;Dbxref=Genbank:WP_000919159.1;Name=WP_000919159.1;gbkey=CDS;gene=glyA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=PHA55_RS17910;product=serine hydroxymethyltransferase;protein_id=WP_000919159.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3674165	3675355	.	+	.	ID=gene-PHA55_RS17915;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=PHA55_RS17915;old_locus_tag=PHA55_17910
NZ_CP116044.1	Protein Homology	CDS	3674165	3675355	.	+	0	ID=cds-WP_000883122.1;Parent=gene-PHA55_RS17915;Dbxref=Genbank:WP_000883122.1;Name=WP_000883122.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417047.1;locus_tag=PHA55_RS17915;product=NO-inducible flavohemoprotein;protein_id=WP_000883122.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3675400	3675738	.	-	.	ID=gene-PHA55_RS17920;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=PHA55_RS17920;old_locus_tag=PHA55_17915
NZ_CP116044.1	Protein Homology	CDS	3675400	3675738	.	-	0	ID=cds-WP_000717694.1;Parent=gene-PHA55_RS17920;Dbxref=Genbank:WP_000717694.1;Name=WP_000717694.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=PHA55_RS17920;product=nitrogen regulatory protein P-II;protein_id=WP_000717694.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3675799	3677133	.	-	.	ID=gene-PHA55_RS17925;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=PHA55_RS17925;old_locus_tag=PHA55_17920
NZ_CP116044.1	Protein Homology	CDS	3675799	3677133	.	-	0	ID=cds-WP_001298983.1;Parent=gene-PHA55_RS17925;Dbxref=Genbank:WP_001298983.1;Name=WP_001298983.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311447.1;locus_tag=PHA55_RS17925;product=two-component system response regulator GlrR;protein_id=WP_001298983.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3677123	3677836	.	-	.	ID=gene-PHA55_RS17930;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=PHA55_RS17930;old_locus_tag=PHA55_17925
NZ_CP116044.1	Protein Homology	CDS	3677123	3677836	.	-	0	ID=cds-WP_001215888.1;Parent=gene-PHA55_RS17930;Dbxref=Genbank:WP_001215888.1;Name=WP_001215888.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311448.1;locus_tag=PHA55_RS17930;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WP_001215888.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3678001	3679428	.	-	.	ID=gene-PHA55_RS17935;Name=qseE;gbkey=Gene;gene=qseE;gene_biotype=protein_coding;locus_tag=PHA55_RS17935;old_locus_tag=PHA55_17930
NZ_CP116044.1	Protein Homology	CDS	3678001	3679428	.	-	0	ID=cds-WP_260589843.1;Parent=gene-PHA55_RS17935;Dbxref=Genbank:WP_260589843.1;Name=WP_260589843.1;gbkey=CDS;gene=qseE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417051.2;locus_tag=PHA55_RS17935;product=two component system sensor histidine kinase QseE/GlrK;protein_id=WP_260589843.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3680004	3683891	.	-	.	ID=gene-PHA55_RS17940;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=PHA55_RS17940;old_locus_tag=PHA55_17935
NZ_CP116044.1	Protein Homology	CDS	3680004	3683891	.	-	0	ID=cds-WP_001447407.1;Parent=gene-PHA55_RS17940;Dbxref=Genbank:WP_001447407.1;Name=WP_001447407.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311450.1;locus_tag=PHA55_RS17940;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_001447407.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3684149	3685705	.	+	.	ID=gene-PHA55_RS17945;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=PHA55_RS17945;old_locus_tag=PHA55_17940
NZ_CP116044.1	Protein Homology	CDS	3684149	3685705	.	+	0	ID=cds-WP_000734212.1;Parent=gene-PHA55_RS17945;Dbxref=Genbank:WP_000734212.1;Name=WP_000734212.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417053.2;locus_tag=PHA55_RS17945;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_000734212.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3685702	3686205	.	-	.	ID=gene-PHA55_RS17950;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=PHA55_RS17950;old_locus_tag=PHA55_17945
NZ_CP116044.1	Protein Homology	CDS	3685702	3686205	.	-	0	ID=cds-WP_001297409.1;Parent=gene-PHA55_RS17950;Dbxref=Genbank:WP_001297409.1;Name=WP_001297409.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417054.2;locus_tag=PHA55_RS17950;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_001297409.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3686263	3686898	.	-	.	ID=gene-PHA55_RS17955;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=PHA55_RS17955;old_locus_tag=PHA55_17950
NZ_CP116044.1	Protein Homology	CDS	3686263	3686898	.	-	0	ID=cds-WP_000190658.1;Parent=gene-PHA55_RS17955;Dbxref=Genbank:WP_000190658.1;Name=WP_000190658.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhb;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417055.4;locus_tag=PHA55_RS17955;product=phosphatidylglycerophosphatase C;protein_id=WP_000190658.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3687107	3687955	.	+	.	ID=gene-PHA55_RS17960;Name=yfhH;gbkey=Gene;gene=yfhH;gene_biotype=protein_coding;locus_tag=PHA55_RS17960;old_locus_tag=PHA55_17955
NZ_CP116044.1	Protein Homology	CDS	3687107	3687955	.	+	0	ID=cds-WP_001013779.1;Parent=gene-PHA55_RS17960;Dbxref=Genbank:WP_001013779.1;Name=WP_001013779.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yfhH;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417056.2;locus_tag=PHA55_RS17960;product=MurR/RpiR family transcriptional regulator;protein_id=WP_001013779.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3688011	3688271	.	+	.	ID=gene-PHA55_RS17965;Name=yfhL;gbkey=Gene;gene=yfhL;gene_biotype=protein_coding;locus_tag=PHA55_RS17965;old_locus_tag=PHA55_17960
NZ_CP116044.1	Protein Homology	CDS	3688011	3688271	.	+	0	ID=cds-WP_001196283.1;Parent=gene-PHA55_RS17965;Dbxref=Genbank:WP_001196283.1;Name=WP_001196283.1;gbkey=CDS;gene=yfhL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417057.1;locus_tag=PHA55_RS17965;product=4Fe-4S dicluster ferredoxin YfhL;protein_id=WP_001196283.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3688465	3688545	.	-	.	ID=gene-PHA55_RS17970;Name=shoB;gbkey=Gene;gene=shoB;gene_biotype=protein_coding;locus_tag=PHA55_RS17970;old_locus_tag=PHA55_17965
NZ_CP116044.1	Protein Homology	CDS	3688465	3688545	.	-	0	ID=cds-WP_000128776.1;Parent=gene-PHA55_RS17970;Dbxref=Genbank:WP_000128776.1;Name=WP_000128776.1;gbkey=CDS;gene=shoB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791251.1;locus_tag=PHA55_RS17970;product=type I toxin-antitoxin system toxin ShoB;protein_id=WP_000128776.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3688965	3689345	.	-	.	ID=gene-PHA55_RS17975;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=PHA55_RS17975;old_locus_tag=PHA55_17970
NZ_CP116044.1	Protein Homology	CDS	3688965	3689345	.	-	0	ID=cds-WP_000986029.1;Parent=gene-PHA55_RS17975;Dbxref=Genbank:WP_000986029.1;Name=WP_000986029.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708415.1;locus_tag=PHA55_RS17975;product=holo-ACP synthase;protein_id=WP_000986029.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3689345	3690076	.	-	.	ID=gene-PHA55_RS17980;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=PHA55_RS17980;old_locus_tag=PHA55_17975
NZ_CP116044.1	Protein Homology	CDS	3689345	3690076	.	-	0	ID=cds-WP_260589844.1;Parent=gene-PHA55_RS17980;Dbxref=Genbank:WP_260589844.1;Name=WP_260589844.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311457.1;locus_tag=PHA55_RS17980;product=pyridoxine 5'-phosphate synthase;protein_id=WP_260589844.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3690088	3690816	.	-	.	ID=gene-PHA55_RS17985;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=PHA55_RS17985;old_locus_tag=PHA55_17980
NZ_CP116044.1	Protein Homology	CDS	3690088	3690816	.	-	0	ID=cds-WP_000399393.1;Parent=gene-PHA55_RS17985;Dbxref=Genbank:WP_000399393.1;Name=WP_000399393.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311458.1;locus_tag=PHA55_RS17985;product=DNA repair protein RecO;protein_id=WP_000399393.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3690828	3691733	.	-	.	ID=gene-PHA55_RS17990;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=PHA55_RS17990;old_locus_tag=PHA55_17985
NZ_CP116044.1	Protein Homology	CDS	3690828	3691733	.	-	0	ID=cds-WP_000020737.1;Parent=gene-PHA55_RS17990;Dbxref=Genbank:WP_000020737.1;Name=WP_000020737.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0019843,GO:0043022;gbkey=CDS;gene=era;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,rRNA binding|0019843||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417061.1;locus_tag=PHA55_RS17990;product=GTPase Era;protein_id=WP_000020737.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3691730	3692410	.	-	.	ID=gene-PHA55_RS17995;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=PHA55_RS17995;old_locus_tag=PHA55_17990
NZ_CP116044.1	Protein Homology	CDS	3691730	3692410	.	-	0	ID=cds-WP_001068343.1;Parent=gene-PHA55_RS17995;Dbxref=Genbank:WP_001068343.1;Name=WP_001068343.1;Ontology_term=GO:0006396,GO:0004525;gbkey=CDS;gene=rnc;go_function=ribonuclease III activity|0004525||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=PHA55_RS17995;product=ribonuclease III;protein_id=WP_001068343.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3692683	3693657	.	-	.	ID=gene-PHA55_RS18000;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=PHA55_RS18000;old_locus_tag=PHA55_17995
NZ_CP116044.1	Protein Homology	CDS	3692683	3693657	.	-	0	ID=cds-WP_000002542.1;Parent=gene-PHA55_RS18000;Dbxref=Genbank:WP_000002542.1;Name=WP_000002542.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311461.1;locus_tag=PHA55_RS18000;product=signal peptidase I;protein_id=WP_000002542.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3693673	3695472	.	-	.	ID=gene-PHA55_RS18005;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=PHA55_RS18005;old_locus_tag=PHA55_18000
NZ_CP116044.1	Protein Homology	CDS	3693673	3695472	.	-	0	ID=cds-WP_000790168.1;Parent=gene-PHA55_RS18005;Dbxref=Genbank:WP_000790168.1;Name=WP_000790168.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311462.1;locus_tag=PHA55_RS18005;product=translation elongation factor 4;protein_id=WP_000790168.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3695670	3696149	.	-	.	ID=gene-PHA55_RS18010;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=PHA55_RS18010;old_locus_tag=PHA55_18005
NZ_CP116044.1	Protein Homology	CDS	3695670	3696149	.	-	0	ID=cds-WP_000589070.1;Parent=gene-PHA55_RS18010;Dbxref=Genbank:WP_000589070.1;Name=WP_000589070.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311463.1;locus_tag=PHA55_RS18010;product=SoxR-reducing system protein RseC;protein_id=WP_000589070.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3696146	3697102	.	-	.	ID=gene-PHA55_RS18015;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=PHA55_RS18015;old_locus_tag=PHA55_18010
NZ_CP116044.1	Protein Homology	CDS	3696146	3697102	.	-	0	ID=cds-WP_000812053.1;Parent=gene-PHA55_RS18015;Dbxref=Genbank:WP_000812053.1;Name=WP_000812053.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311464.1;locus_tag=PHA55_RS18015;product=sigma-E factor regulatory protein RseB;protein_id=WP_000812053.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3697102	3697752	.	-	.	ID=gene-PHA55_RS18020;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=PHA55_RS18020;old_locus_tag=PHA55_18015
NZ_CP116044.1	Protein Homology	CDS	3697102	3697752	.	-	0	ID=cds-WP_001168459.1;Parent=gene-PHA55_RS18020;Dbxref=Genbank:WP_001168459.1;Name=WP_001168459.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417067.1;locus_tag=PHA55_RS18020;product=anti-sigma-E factor RseA;protein_id=WP_001168459.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3697785	3698360	.	-	.	ID=gene-PHA55_RS18025;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=PHA55_RS18025;old_locus_tag=PHA55_18020
NZ_CP116044.1	Protein Homology	CDS	3697785	3698360	.	-	0	ID=cds-WP_001295364.1;Parent=gene-PHA55_RS18025;Dbxref=Genbank:WP_001295364.1;Name=WP_001295364.1;Ontology_term=GO:0006352,GO:0006979,GO:0016987,GO:0005737;gbkey=CDS;gene=rpoE;go_component=cytoplasm|0005737||IEA;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=PHA55_RS18025;product=RNA polymerase sigma factor RpoE;protein_id=WP_001295364.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3698357	3698512	.	-	.	ID=gene-PHA55_RS18030;Name=rseD;gbkey=Gene;gene=rseD;gene_biotype=protein_coding;locus_tag=PHA55_RS18030;old_locus_tag=PHA55_18025
NZ_CP116044.1	Protein Homology	CDS	3698357	3698512	.	-	0	ID=cds-WP_001303621.1;Parent=gene-PHA55_RS18030;Dbxref=Genbank:WP_001303621.1;Name=WP_001303621.1;gbkey=CDS;gene=rseD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518806.1;locus_tag=PHA55_RS18030;product=rpoE leader peptide RseD;protein_id=WP_001303621.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3698768	3700390	.	+	.	ID=gene-PHA55_RS18035;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=PHA55_RS18035;old_locus_tag=PHA55_18030
NZ_CP116044.1	Protein Homology	CDS	3698768	3700390	.	+	0	ID=cds-WP_001094499.1;Parent=gene-PHA55_RS18035;Dbxref=Genbank:WP_001094499.1;Name=WP_001094499.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417069.1;locus_tag=PHA55_RS18035;product=L-aspartate oxidase;protein_id=WP_001094499.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3700375	3701112	.	-	.	ID=gene-PHA55_RS18040;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=protein_coding;locus_tag=PHA55_RS18040;old_locus_tag=PHA55_18035
NZ_CP116044.1	Protein Homology	CDS	3700375	3701112	.	-	0	ID=cds-WP_001298974.1;Parent=gene-PHA55_RS18040;Dbxref=Genbank:WP_001298974.1;Name=WP_001298974.1;gbkey=CDS;gene=trmN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417070.2;locus_tag=PHA55_RS18040;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;protein_id=WP_001298974.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3701244	3702578	.	+	.	ID=gene-PHA55_RS18045;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=PHA55_RS18045;old_locus_tag=PHA55_18040
NZ_CP116044.1	Protein Homology	CDS	3701244	3702578	.	+	0	ID=cds-WP_000219193.1;Parent=gene-PHA55_RS18045;Dbxref=Genbank:WP_000219193.1;Name=WP_000219193.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311469.1;locus_tag=PHA55_RS18045;product=ATP-dependent RNA helicase SrmB;protein_id=WP_000219193.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3702849	3703829	.	+	.	ID=gene-PHA55_RS18050;Name=PHA55_RS18050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS18050;old_locus_tag=PHA55_18045
NZ_CP116044.1	Protein Homology	CDS	3702849	3703829	.	+	0	ID=cds-WP_000399648.1-9;Parent=gene-PHA55_RS18050;Dbxref=Genbank:WP_000399648.1;Name=WP_000399648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904434.1;locus_tag=PHA55_RS18050;product=IS110-like element IS621 family transposase;protein_id=WP_000399648.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3704067	3704948	.	-	.	ID=gene-PHA55_RS18055;Name=yfiE;gbkey=Gene;gene=yfiE;gene_biotype=protein_coding;locus_tag=PHA55_RS18055;old_locus_tag=PHA55_18050
NZ_CP116044.1	Protein Homology	CDS	3704067	3704948	.	-	0	ID=cds-WP_000365855.1;Parent=gene-PHA55_RS18055;Dbxref=Genbank:WP_000365855.1;Name=WP_000365855.1;gbkey=CDS;gene=yfiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417072.4;locus_tag=PHA55_RS18055;product=LysR family transcriptional regulator;protein_id=WP_000365855.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3705051	3705638	.	+	.	ID=gene-PHA55_RS18060;Name=eamB;gbkey=Gene;gene=eamB;gene_biotype=protein_coding;locus_tag=PHA55_RS18060;old_locus_tag=PHA55_18055
NZ_CP116044.1	Protein Homology	CDS	3705051	3705638	.	+	0	ID=cds-WP_000189207.1;Parent=gene-PHA55_RS18060;Dbxref=Genbank:WP_000189207.1;Name=WP_000189207.1;gbkey=CDS;gene=eamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417073.1;locus_tag=PHA55_RS18060;product=cysteine/O-acetylserine transporter;protein_id=WP_000189207.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3705694	3706077	.	-	.	ID=gene-PHA55_RS18065;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=PHA55_RS18065;old_locus_tag=PHA55_18060
NZ_CP116044.1	Protein Homology	CDS	3705694	3706077	.	-	0	ID=cds-WP_000627807.1;Parent=gene-PHA55_RS18065;Dbxref=Genbank:WP_000627807.1;Name=WP_000627807.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=PHA55_RS18065;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_000627807.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3706382	3707071	.	+	.	ID=gene-PHA55_RS18070;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=PHA55_RS18070;old_locus_tag=PHA55_18065
NZ_CP116044.1	Protein Homology	CDS	3706382	3707071	.	+	0	ID=cds-WP_001262716.1;Parent=gene-PHA55_RS18070;Dbxref=Genbank:WP_001262716.1;Name=WP_001262716.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417075.1;locus_tag=PHA55_RS18070;product=uracil-DNA glycosylase;protein_id=WP_001262716.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3707119	3708156	.	-	.	ID=gene-PHA55_RS18075;Name=yfiF;gbkey=Gene;gene=yfiF;gene_biotype=protein_coding;locus_tag=PHA55_RS18075;old_locus_tag=PHA55_18070
NZ_CP116044.1	Protein Homology	CDS	3707119	3708156	.	-	0	ID=cds-WP_000997403.1;Parent=gene-PHA55_RS18075;Dbxref=Genbank:WP_000997403.1;Name=WP_000997403.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=yfiF;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311474.1;locus_tag=PHA55_RS18075;product=tRNA/rRNA methyltransferase;protein_id=WP_000997403.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3708363	3708782	.	+	.	ID=gene-PHA55_RS18080;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=PHA55_RS18080;old_locus_tag=PHA55_18075
NZ_CP116044.1	Protein Homology	CDS	3708363	3708782	.	+	0	ID=cds-WP_001098726.1;Parent=gene-PHA55_RS18080;Dbxref=Genbank:WP_001098726.1;Name=WP_001098726.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311475.1;locus_tag=PHA55_RS18080;product=thioredoxin TrxC;protein_id=WP_001098726.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3708851	3709549	.	+	.	ID=gene-PHA55_RS18085;Name=tapT;gbkey=Gene;gene=tapT;gene_biotype=protein_coding;gene_synonym=tuaA,yfiP;locus_tag=PHA55_RS18085;old_locus_tag=PHA55_18080
NZ_CP116044.1	Protein Homology	CDS	3708851	3709549	.	+	0	ID=cds-WP_001343689.1;Parent=gene-PHA55_RS18085;Dbxref=Genbank:WP_001343689.1;Name=WP_001343689.1;gbkey=CDS;gene=tapT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311476.2;locus_tag=PHA55_RS18085;product=tRNA-uridine aminocarboxypropyltransferase;protein_id=WP_001343689.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3709581	3712241	.	+	.	ID=gene-PHA55_RS18090;Name=pat;gbkey=Gene;gene=pat;gene_biotype=protein_coding;locus_tag=PHA55_RS18090;old_locus_tag=PHA55_18085
NZ_CP116044.1	Protein Homology	CDS	3709581	3712241	.	+	0	ID=cds-WP_000082949.1;Parent=gene-PHA55_RS18090;Dbxref=Genbank:WP_000082949.1;Name=WP_000082949.1;gbkey=CDS;gene=pat;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417079.1;locus_tag=PHA55_RS18090;product=protein lysine acetyltransferase;protein_id=WP_000082949.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	3712330	3712371	.	+	.	ID=gene-PHA55_RS18095;Name=PHA55_RS18095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS18095;old_locus_tag=PHA55_18090;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	3712330	3712371	.	+	0	ID=cds-PHA55_RS18095;Parent=gene-PHA55_RS18095;Note=too short;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051192.1;locus_tag=PHA55_RS18095;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	3712355	3713710	.	+	.	ID=gene-PHA55_RS18100;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=PHA55_RS18100;old_locus_tag=PHA55_18095
NZ_CP116044.1	Protein Homology	CDS	3712355	3713710	.	+	0	ID=cds-WP_000949265.1;Parent=gene-PHA55_RS18100;Dbxref=Genbank:WP_000949265.1;Name=WP_000949265.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=PHA55_RS18100;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_000949265.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3713756	3714079	.	+	.	ID=gene-PHA55_RS18105;Name=yfiM;gbkey=Gene;gene=yfiM;gene_biotype=protein_coding;locus_tag=PHA55_RS18105;old_locus_tag=PHA55_18100
NZ_CP116044.1	Protein Homology	CDS	3713756	3714079	.	+	0	ID=cds-WP_001300818.1;Parent=gene-PHA55_RS18105;Dbxref=Genbank:WP_001300818.1;Name=WP_001300818.1;gbkey=CDS;gene=yfiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417081.2;locus_tag=PHA55_RS18105;product=YfiM family lipoprotein;protein_id=WP_001300818.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3714076	3715374	.	-	.	ID=gene-PHA55_RS18110;Name=kgtP;gbkey=Gene;gene=kgtP;gene_biotype=protein_coding;locus_tag=PHA55_RS18110;old_locus_tag=PHA55_18105
NZ_CP116044.1	Protein Homology	CDS	3714076	3715374	.	-	0	ID=cds-WP_000230376.1;Parent=gene-PHA55_RS18110;Dbxref=Genbank:WP_000230376.1;Name=WP_000230376.1;gbkey=CDS;gene=kgtP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417082.1;locus_tag=PHA55_RS18110;product=alpha-ketoglutarate permease;protein_id=WP_000230376.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3715700	3715815	.	-	.	ID=gene-PHA55_RS18115;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PHA55_RS18115;old_locus_tag=PHA55_18110
NZ_CP116044.1	cmsearch	rRNA	3715700	3715815	.	-	.	ID=rna-PHA55_RS18115;Parent=gene-PHA55_RS18115;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS18115;product=5S ribosomal RNA
NZ_CP116044.1	cmsearch	exon	3715700	3715815	.	-	.	ID=exon-PHA55_RS18115-1;Parent=rna-PHA55_RS18115;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS18115;product=5S ribosomal RNA
NZ_CP116044.1	RefSeq	gene	3715910	3718813	.	-	.	ID=gene-PHA55_RS18120;Name=PHA55_RS18120;gbkey=Gene;gene_biotype=rRNA;locus_tag=PHA55_RS18120;old_locus_tag=PHA55_18115
NZ_CP116044.1	cmsearch	rRNA	3715910	3718813	.	-	.	ID=rna-PHA55_RS18120;Parent=gene-PHA55_RS18120;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS18120;product=23S ribosomal RNA
NZ_CP116044.1	cmsearch	exon	3715910	3718813	.	-	.	ID=exon-PHA55_RS18120-1;Parent=rna-PHA55_RS18120;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS18120;product=23S ribosomal RNA
NZ_CP116044.1	RefSeq	gene	3718998	3719073	.	-	.	ID=gene-PHA55_RS18125;Name=PHA55_RS18125;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS18125;old_locus_tag=PHA55_18120
NZ_CP116044.1	tRNAscan-SE	tRNA	3718998	3719073	.	-	.	ID=rna-PHA55_RS18125;Parent=gene-PHA55_RS18125;anticodon=(pos:complement(3719037..3719039));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS18125;product=tRNA-Glu
NZ_CP116044.1	tRNAscan-SE	exon	3718998	3719073	.	-	.	ID=exon-PHA55_RS18125-1;Parent=rna-PHA55_RS18125;anticodon=(pos:complement(3719037..3719039));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS18125;product=tRNA-Glu
NZ_CP116044.1	RefSeq	gene	3719245	3720786	.	-	.	ID=gene-PHA55_RS18130;Name=PHA55_RS18130;gbkey=Gene;gene_biotype=rRNA;locus_tag=PHA55_RS18130;old_locus_tag=PHA55_18125
NZ_CP116044.1	cmsearch	rRNA	3719245	3720786	.	-	.	ID=rna-PHA55_RS18130;Parent=gene-PHA55_RS18130;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS18130;product=16S ribosomal RNA
NZ_CP116044.1	cmsearch	exon	3719245	3720786	.	-	.	ID=exon-PHA55_RS18130-1;Parent=rna-PHA55_RS18130;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS18130;product=16S ribosomal RNA
NZ_CP116044.1	RefSeq	gene	3721230	3723803	.	-	.	ID=gene-PHA55_RS18135;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=PHA55_RS18135;old_locus_tag=PHA55_18130
NZ_CP116044.1	Protein Homology	CDS	3721230	3723803	.	-	0	ID=cds-WP_001235102.1;Parent=gene-PHA55_RS18135;Dbxref=Genbank:WP_001235102.1;Name=WP_001235102.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=PHA55_RS18135;product=ATP-dependent chaperone ClpB;protein_id=WP_001235102.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3723933	3724664	.	-	.	ID=gene-PHA55_RS18140;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=PHA55_RS18140;old_locus_tag=PHA55_18135
NZ_CP116044.1	Protein Homology	CDS	3723933	3724664	.	-	0	ID=cds-WP_000040115.1;Parent=gene-PHA55_RS18140;Dbxref=Genbank:WP_000040115.1;Name=WP_000040115.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417084.1;locus_tag=PHA55_RS18140;product=purine nucleoside phosphorylase YfiH;protein_id=WP_000040115.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3724661	3725641	.	-	.	ID=gene-PHA55_RS18145;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=PHA55_RS18145;old_locus_tag=PHA55_18140
NZ_CP116044.1	Protein Homology	CDS	3724661	3725641	.	-	0	ID=cds-WP_000079107.1;Parent=gene-PHA55_RS18145;Dbxref=Genbank:WP_000079107.1;Name=WP_000079107.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=PHA55_RS18145;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_000079107.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3725776	3726513	.	+	.	ID=gene-PHA55_RS18150;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=PHA55_RS18150;old_locus_tag=PHA55_18145
NZ_CP116044.1	Protein Homology	CDS	3725776	3726513	.	+	0	ID=cds-WP_000197686.1;Parent=gene-PHA55_RS18150;Dbxref=Genbank:WP_000197686.1;Name=WP_000197686.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311485.1;locus_tag=PHA55_RS18150;product=outer membrane protein assembly factor BamD;protein_id=WP_000197686.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3726784	3727125	.	+	.	ID=gene-PHA55_RS18155;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=PHA55_RS18155;old_locus_tag=PHA55_18150
NZ_CP116044.1	Protein Homology	CDS	3726784	3727125	.	+	0	ID=cds-WP_000178456.1;Parent=gene-PHA55_RS18155;Dbxref=Genbank:WP_000178456.1;Name=WP_000178456.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311487.1;locus_tag=PHA55_RS18155;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_000178456.1;transl_table=11
NZ_CP116044.1	cmsearch	sequence_feature	3727228	3727353	.	+	.	ID=id-NZ_CP116044.1:3727228..3727353;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1
NZ_CP116044.1	RefSeq	gene	3727229	3727276	.	+	.	ID=gene-PHA55_RS18160;Name=pheL;gbkey=Gene;gene=pheL;gene_biotype=protein_coding;locus_tag=PHA55_RS18160;old_locus_tag=PHA55_18155
NZ_CP116044.1	Protein Homology	CDS	3727229	3727276	.	+	0	ID=cds-WP_001386991.1;Parent=gene-PHA55_RS18160;Dbxref=Genbank:WP_001386991.1;Name=WP_001386991.1;gbkey=CDS;gene=pheL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311488.1;locus_tag=PHA55_RS18160;product=pheA operon leader peptide PheL;protein_id=WP_001386991.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3727375	3728535	.	+	.	ID=gene-PHA55_RS18165;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=PHA55_RS18165;old_locus_tag=PHA55_18160
NZ_CP116044.1	Protein Homology	CDS	3727375	3728535	.	+	0	ID=cds-WP_000200116.1;Parent=gene-PHA55_RS18165;Dbxref=Genbank:WP_000200116.1;Name=WP_000200116.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311489.1;locus_tag=PHA55_RS18165;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_000200116.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3728578	3729699	.	-	.	ID=gene-PHA55_RS18170;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=PHA55_RS18170;old_locus_tag=PHA55_18165
NZ_CP116044.1	Protein Homology	CDS	3728578	3729699	.	-	0	ID=cds-WP_000225221.1;Parent=gene-PHA55_RS18170;Dbxref=Genbank:WP_000225221.1;Name=WP_000225221.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311490.1;locus_tag=PHA55_RS18170;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_000225221.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3729710	3730780	.	-	.	ID=gene-PHA55_RS18175;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=PHA55_RS18175;old_locus_tag=PHA55_18170
NZ_CP116044.1	Protein Homology	CDS	3729710	3730780	.	-	0	ID=cds-WP_001168044.1;Parent=gene-PHA55_RS18175;Dbxref=Genbank:WP_001168044.1;Name=WP_001168044.1;gbkey=CDS;gene=aroF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311491.1;locus_tag=PHA55_RS18175;product=3-deoxy-7-phosphoheptulonate synthase AroF;protein_id=WP_001168044.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3730990	3731355	.	+	.	ID=gene-PHA55_RS18180;Name=yfiL;gbkey=Gene;gene=yfiL;gene_biotype=protein_coding;locus_tag=PHA55_RS18180;old_locus_tag=PHA55_18175
NZ_CP116044.1	Protein Homology	CDS	3730990	3731355	.	+	0	ID=cds-WP_000976004.1;Parent=gene-PHA55_RS18180;Dbxref=Genbank:WP_000976004.1;Name=WP_000976004.1;gbkey=CDS;gene=yfiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417093.2;locus_tag=PHA55_RS18180;product=DUF2799 domain-containing protein;protein_id=WP_000976004.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3731505	3732023	.	+	.	ID=gene-PHA55_RS18185;Name=yfiR;gbkey=Gene;gene=yfiR;gene_biotype=protein_coding;locus_tag=PHA55_RS18185;old_locus_tag=PHA55_18180
NZ_CP116044.1	Protein Homology	CDS	3731505	3732023	.	+	0	ID=cds-WP_001212391.1;Parent=gene-PHA55_RS18185;Dbxref=Genbank:WP_001212391.1;Name=WP_001212391.1;gbkey=CDS;gene=yfiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311493.1;locus_tag=PHA55_RS18185;product=YfiR family protein;protein_id=WP_001212391.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3732013	3733239	.	+	.	ID=gene-PHA55_RS18190;Name=dgcN;gbkey=Gene;gene=dgcN;gene_biotype=protein_coding;locus_tag=PHA55_RS18190;old_locus_tag=PHA55_18185
NZ_CP116044.1	Protein Homology	CDS	3732013	3733239	.	+	0	ID=cds-WP_000969030.1;Parent=gene-PHA55_RS18190;Dbxref=Genbank:WP_000969030.1;Name=WP_000969030.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;gene=dgcN;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417095.1;locus_tag=PHA55_RS18190;product=diguanylate cyclase DgcN;protein_id=WP_000969030.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3733255	3733737	.	+	.	ID=gene-PHA55_RS18195;Name=yfiB;gbkey=Gene;gene=yfiB;gene_biotype=protein_coding;locus_tag=PHA55_RS18195;old_locus_tag=PHA55_18190
NZ_CP116044.1	Protein Homology	CDS	3733255	3733737	.	+	0	ID=cds-WP_000589828.1;Parent=gene-PHA55_RS18195;Dbxref=Genbank:WP_000589828.1;Name=WP_000589828.1;gbkey=CDS;gene=yfiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311495.1;locus_tag=PHA55_RS18195;product=OmpA family protein;protein_id=WP_000589828.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3733814	3734161	.	-	.	ID=gene-PHA55_RS18200;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=PHA55_RS18200;old_locus_tag=PHA55_18195
NZ_CP116044.1	Protein Homology	CDS	3733814	3734161	.	-	0	ID=cds-WP_000065253.1;Parent=gene-PHA55_RS18200;Dbxref=Genbank:WP_000065253.1;Name=WP_000065253.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768745.1;locus_tag=PHA55_RS18200;product=50S ribosomal protein L19;protein_id=WP_000065253.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3734203	3734970	.	-	.	ID=gene-PHA55_RS18205;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=PHA55_RS18205;old_locus_tag=PHA55_18200
NZ_CP116044.1	Protein Homology	CDS	3734203	3734970	.	-	0	ID=cds-WP_000264777.1;Parent=gene-PHA55_RS18205;Dbxref=Genbank:WP_000264777.1;Name=WP_000264777.1;Ontology_term=GO:0006400,GO:0009019;gbkey=CDS;gene=trmD;go_function=tRNA (guanine-N1-)-methyltransferase activity|0009019||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311497.1;locus_tag=PHA55_RS18205;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_000264777.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3735001	3735549	.	-	.	ID=gene-PHA55_RS18210;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=PHA55_RS18210;old_locus_tag=PHA55_18205
NZ_CP116044.1	Protein Homology	CDS	3735001	3735549	.	-	0	ID=cds-WP_000043335.1;Parent=gene-PHA55_RS18210;Dbxref=Genbank:WP_000043335.1;Name=WP_000043335.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0003723;gbkey=CDS;gene=rimM;go_function=RNA binding|0003723||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=PHA55_RS18210;product=ribosome maturation factor RimM;protein_id=WP_000043335.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3735568	3735816	.	-	.	ID=gene-PHA55_RS18215;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=PHA55_RS18215;old_locus_tag=PHA55_18210
NZ_CP116044.1	Protein Homology	CDS	3735568	3735816	.	-	0	ID=cds-WP_000256450.1;Parent=gene-PHA55_RS18215;Dbxref=Genbank:WP_000256450.1;Name=WP_000256450.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256453.1;locus_tag=PHA55_RS18215;product=30S ribosomal protein S16;protein_id=WP_000256450.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3736065	3737426	.	-	.	ID=gene-PHA55_RS18220;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=PHA55_RS18220;old_locus_tag=PHA55_18215
NZ_CP116044.1	Protein Homology	CDS	3736065	3737426	.	-	0	ID=cds-WP_000460035.1;Parent=gene-PHA55_RS18220;Dbxref=Genbank:WP_000460035.1;Name=WP_000460035.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=PHA55_RS18220;product=signal recognition particle protein;protein_id=WP_000460035.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3737593	3738384	.	+	.	ID=gene-PHA55_RS18225;Name=ypjD;gbkey=Gene;gene=ypjD;gene_biotype=protein_coding;locus_tag=PHA55_RS18225;old_locus_tag=PHA55_18220
NZ_CP116044.1	Protein Homology	CDS	3737593	3738384	.	+	0	ID=cds-WP_001338897.1;Parent=gene-PHA55_RS18225;Dbxref=Genbank:WP_001338897.1;Name=WP_001338897.1;gbkey=CDS;gene=ypjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417102.4;locus_tag=PHA55_RS18225;product=inner membrane protein YpjD;protein_id=WP_001338897.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3738405	3739691	.	+	.	ID=gene-PHA55_RS18230;Name=yfjD;gbkey=Gene;gene=yfjD;gene_biotype=protein_coding;locus_tag=PHA55_RS18230;old_locus_tag=PHA55_18225
NZ_CP116044.1	Protein Homology	CDS	3738405	3739691	.	+	0	ID=cds-WP_010723175.1;Parent=gene-PHA55_RS18230;Dbxref=Genbank:WP_010723175.1;Name=WP_010723175.1;gbkey=CDS;gene=yfjD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026171.3;locus_tag=PHA55_RS18230;product=HlyC/CorC family transporter;protein_id=WP_010723175.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3739814	3740419	.	+	.	ID=gene-PHA55_RS18235;Name=PHA55_RS18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS18235;old_locus_tag=PHA55_18230
NZ_CP116044.1	Protein Homology	CDS	3739814	3740419	.	+	0	ID=cds-WP_001287917.1;Parent=gene-PHA55_RS18235;Dbxref=Genbank:WP_001287917.1;Name=WP_001287917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461610.1;locus_tag=PHA55_RS18235;product=hypothetical protein;protein_id=WP_001287917.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3740454	3741044	.	-	.	ID=gene-PHA55_RS18240;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=PHA55_RS18240;old_locus_tag=PHA55_18235
NZ_CP116044.1	Protein Homology	CDS	3740454	3741044	.	-	0	ID=cds-WP_001300112.1;Parent=gene-PHA55_RS18240;Dbxref=Genbank:WP_001300112.1;Name=WP_001300112.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461611.1;locus_tag=PHA55_RS18240;product=nucleotide exchange factor GrpE;protein_id=WP_001300112.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3741167	3742045	.	+	.	ID=gene-PHA55_RS18245;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=PHA55_RS18245;old_locus_tag=PHA55_18240
NZ_CP116044.1	Protein Homology	CDS	3741167	3742045	.	+	0	ID=cds-WP_001059169.1;Parent=gene-PHA55_RS18245;Dbxref=Genbank:WP_001059169.1;Name=WP_001059169.1;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239499.1;locus_tag=PHA55_RS18245;product=NAD(+) kinase;protein_id=WP_001059169.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3742131	3743792	.	+	.	ID=gene-PHA55_RS18250;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=PHA55_RS18250;old_locus_tag=PHA55_18245
NZ_CP116044.1	Protein Homology	CDS	3742131	3743792	.	+	0	ID=cds-WP_000880910.1;Parent=gene-PHA55_RS18250;Dbxref=Genbank:WP_000880910.1;Name=WP_000880910.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026172.1;locus_tag=PHA55_RS18250;product=DNA repair protein RecN;protein_id=WP_000880910.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3743941	3744282	.	+	.	ID=gene-PHA55_RS18255;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=PHA55_RS18255;old_locus_tag=PHA55_18250
NZ_CP116044.1	Protein Homology	CDS	3743941	3744282	.	+	0	ID=cds-WP_001203437.1;Parent=gene-PHA55_RS18255;Dbxref=Genbank:WP_001203437.1;Name=WP_001203437.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417107.2;locus_tag=PHA55_RS18255;product=outer membrane protein assembly factor BamE;protein_id=WP_001203437.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3744344	3744634	.	-	.	ID=gene-PHA55_RS18260;Name=yfjF;gbkey=Gene;gene=yfjF;gene_biotype=protein_coding;locus_tag=PHA55_RS18260;old_locus_tag=PHA55_18255
NZ_CP116044.1	Protein Homology	CDS	3744344	3744634	.	-	0	ID=cds-WP_001117838.1;Parent=gene-PHA55_RS18260;Dbxref=Genbank:WP_001117838.1;Name=WP_001117838.1;gbkey=CDS;gene=yfjF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417108.4;locus_tag=PHA55_RS18260;product=RnfH family protein;protein_id=WP_001117838.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3744624	3745061	.	-	.	ID=gene-PHA55_RS18265;Name=ratA;gbkey=Gene;gene=ratA;gene_biotype=protein_coding;locus_tag=PHA55_RS18265;old_locus_tag=PHA55_18260
NZ_CP116044.1	Protein Homology	CDS	3744624	3745061	.	-	0	ID=cds-WP_001341638.1;Parent=gene-PHA55_RS18265;Dbxref=Genbank:WP_001341638.1;Name=WP_001341638.1;gbkey=CDS;gene=ratA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376629.1;locus_tag=PHA55_RS18265;product=type II toxin-antitoxin system toxin RatA;protein_id=WP_001341638.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3745232	3745714	.	+	.	ID=gene-PHA55_RS18270;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=PHA55_RS18270;old_locus_tag=PHA55_18265
NZ_CP116044.1	Protein Homology	CDS	3745232	3745714	.	+	0	ID=cds-WP_000162574.1;Parent=gene-PHA55_RS18270;Dbxref=Genbank:WP_000162574.1;Name=WP_000162574.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311509.1;locus_tag=PHA55_RS18270;product=SsrA-binding protein SmpB;protein_id=WP_000162574.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3745929	3746291	.	+	.	ID=gene-PHA55_RS18275;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=PHA55_RS18275;old_locus_tag=PHA55_18270
NZ_CP116044.1	cmsearch	tmRNA	3745929	3746291	.	+	.	ID=rna-PHA55_RS18275;Parent=gene-PHA55_RS18275;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS18275;product=transfer-messenger RNA
NZ_CP116044.1	cmsearch	exon	3745929	3746291	.	+	.	ID=exon-PHA55_RS18275-1;Parent=rna-PHA55_RS18275;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS18275;product=transfer-messenger RNA
NZ_CP116044.1	RefSeq	pseudogene	3746452	3749712	.	-	.	ID=gene-PHA55_RS18280;Name=PHA55_RS18280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS18280;old_locus_tag=PHA55_18275;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	3746452	3749712	.	-	0	ID=cds-PHA55_RS18280;Parent=gene-PHA55_RS18280;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001571801.1;locus_tag=PHA55_RS18280;product=AIDA repeat-containing protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	3749777	3749896	.	-	.	ID=gene-PHA55_RS18285;Name=PHA55_RS18285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS18285;old_locus_tag=PHA55_18280
NZ_CP116044.1	Protein Homology	CDS	3749777	3749896	.	-	0	ID=cds-WP_000927517.1;Parent=gene-PHA55_RS18285;Dbxref=Genbank:WP_000927517.1;Name=WP_000927517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001131457.1;locus_tag=PHA55_RS18285;product=hypothetical protein;protein_id=WP_000927517.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	3750120	3750278	.	-	.	ID=gene-PHA55_RS18290;Name=PHA55_RS18290;end_range=3750278,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS18290;old_locus_tag=PHA55_18285;partial=true;pseudo=true;start_range=.,3750120
NZ_CP116044.1	Protein Homology	CDS	3750120	3750278	.	-	0	ID=cds-PHA55_RS18290;Parent=gene-PHA55_RS18290;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006310,GO:0000150,GO:0003677;end_range=3750278,.;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016239934.1;locus_tag=PHA55_RS18290;partial=true;product=recombinase family protein;pseudo=true;start_range=.,3750120;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	3750625	3751997	.	-	.	ID=gene-PHA55_RS18295;Name=PHA55_RS18295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS18295;old_locus_tag=PHA55_18290;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	3750625	3751997	.	-	0	ID=cds-PHA55_RS18295;Parent=gene-PHA55_RS18295;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000961353.1;locus_tag=PHA55_RS18295;product=DUF5507 domain-containing protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	3752747	3752822	.	-	.	ID=gene-PHA55_RS18300;Name=PHA55_RS18300;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS18300;old_locus_tag=PHA55_18295
NZ_CP116044.1	tRNAscan-SE	tRNA	3752747	3752822	.	-	.	ID=rna-PHA55_RS18300;Parent=gene-PHA55_RS18300;anticodon=(pos:complement(3752787..3752789));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS18300;product=tRNA-Ile
NZ_CP116044.1	tRNAscan-SE	exon	3752747	3752822	.	-	.	ID=exon-PHA55_RS18300-1;Parent=rna-PHA55_RS18300;anticodon=(pos:complement(3752787..3752789));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS18300;product=tRNA-Ile
NZ_CP116044.1	RefSeq	pseudogene	3753382	3755635	.	+	.	ID=gene-PHA55_RS18305;Name=PHA55_RS18305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS18305;old_locus_tag=PHA55_18300;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	3753382	3755635	.	+	0	ID=cds-PHA55_RS18305;Parent=gene-PHA55_RS18305;Note=frameshifted%3B internal stop;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439272.1;locus_tag=PHA55_RS18305;product=alpha-amylase family glycosyl hydrolase;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	3755971	3756948	.	+	.	ID=gene-PHA55_RS18310;Name=glaH;gbkey=Gene;gene=glaH;gene_biotype=protein_coding;locus_tag=PHA55_RS18310;old_locus_tag=PHA55_18305
NZ_CP116044.1	Protein Homology	CDS	3755971	3756948	.	+	0	ID=cds-WP_000993087.1;Parent=gene-PHA55_RS18310;Dbxref=Genbank:WP_000993087.1;Name=WP_000993087.1;Ontology_term=GO:0050498;gbkey=CDS;gene=glaH;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C with 2-oxoglutarate as one donor%2C and the other dehydrogenated|0050498||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311547.2;locus_tag=PHA55_RS18310;product=glutarate dioxygenase GlaH;protein_id=WP_000993087.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3756968	3758236	.	+	.	ID=gene-PHA55_RS18315;Name=lhgO;gbkey=Gene;gene=lhgO;gene_biotype=protein_coding;locus_tag=PHA55_RS18315;old_locus_tag=PHA55_18310
NZ_CP116044.1	Protein Homology	CDS	3756968	3758236	.	+	0	ID=cds-WP_001472082.1;Parent=gene-PHA55_RS18315;Dbxref=Genbank:WP_001472082.1;Name=WP_001472082.1;Ontology_term=GO:0016491;gbkey=CDS;gene=lhgO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417146.2;locus_tag=PHA55_RS18315;product=L-2-hydroxyglutarate oxidase;protein_id=WP_001472082.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3758259	3759707	.	+	.	ID=gene-PHA55_RS18320;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=PHA55_RS18320;old_locus_tag=PHA55_18315
NZ_CP116044.1	Protein Homology	CDS	3758259	3759707	.	+	0	ID=cds-WP_000772857.1;Parent=gene-PHA55_RS18320;Dbxref=Genbank:WP_000772857.1;Name=WP_000772857.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311549.1;locus_tag=PHA55_RS18320;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_000772857.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3759721	3761001	.	+	.	ID=gene-PHA55_RS18325;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=PHA55_RS18325;old_locus_tag=PHA55_18320
NZ_CP116044.1	Protein Homology	CDS	3759721	3761001	.	+	0	ID=cds-WP_001472084.1;Parent=gene-PHA55_RS18325;Dbxref=Genbank:WP_001472084.1;Name=WP_001472084.1;Ontology_term=GO:0009448,GO:0003867,GO:0030170;gbkey=CDS;gene=gabT;go_function=4-aminobutyrate transaminase activity|0003867||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311550.1;locus_tag=PHA55_RS18325;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_001472084.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3761312	3762712	.	+	.	ID=gene-PHA55_RS18330;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=PHA55_RS18330;old_locus_tag=PHA55_18325
NZ_CP116044.1	Protein Homology	CDS	3761312	3762712	.	+	0	ID=cds-WP_001295173.1;Parent=gene-PHA55_RS18330;Dbxref=Genbank:WP_001295173.1;Name=WP_001295173.1;Ontology_term=GO:0006865,GO:0015185,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=gamma-aminobutyric acid transmembrane transporter activity|0015185||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417149.1;locus_tag=PHA55_RS18330;product=GABA permease;protein_id=WP_001295173.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3762733	3763395	.	+	.	ID=gene-PHA55_RS18335;Name=csiR;gbkey=Gene;gene=csiR;gene_biotype=protein_coding;locus_tag=PHA55_RS18335;old_locus_tag=PHA55_18330
NZ_CP116044.1	Protein Homology	CDS	3762733	3763395	.	+	0	ID=cds-WP_000156811.1;Parent=gene-PHA55_RS18335;Dbxref=Genbank:WP_000156811.1;Name=WP_000156811.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=csiR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311552.2;locus_tag=PHA55_RS18335;product=DNA-binding transcriptional regulator CsiR;protein_id=WP_000156811.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3763396	3763845	.	-	.	ID=gene-PHA55_RS18340;Name=kbp;gbkey=Gene;gene=kbp;gene_biotype=protein_coding;locus_tag=PHA55_RS18340;old_locus_tag=PHA55_18335
NZ_CP116044.1	Protein Homology	CDS	3763396	3763845	.	-	0	ID=cds-WP_000522424.1;Parent=gene-PHA55_RS18340;Dbxref=Genbank:WP_000522424.1;Name=WP_000522424.1;gbkey=CDS;gene=kbp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311553.1;locus_tag=PHA55_RS18340;product=potassium binding protein Kbp;protein_id=WP_000522424.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3763929	3764087	.	-	.	ID=gene-PHA55_RS18345;Name=yqaE;gbkey=Gene;gene=yqaE;gene_biotype=protein_coding;locus_tag=PHA55_RS18345;old_locus_tag=PHA55_18340
NZ_CP116044.1	Protein Homology	CDS	3763929	3764087	.	-	0	ID=cds-WP_000508177.1;Parent=gene-PHA55_RS18345;Dbxref=Genbank:WP_000508177.1;Name=WP_000508177.1;gbkey=CDS;gene=yqaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311554.1;locus_tag=PHA55_RS18345;product=YqaE/Pmp3 family membrane protein;protein_id=WP_000508177.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3764270	3764569	.	+	.	ID=gene-PHA55_RS18350;Name=ygaV;gbkey=Gene;gene=ygaV;gene_biotype=protein_coding;locus_tag=PHA55_RS18350;old_locus_tag=PHA55_18345
NZ_CP116044.1	Protein Homology	CDS	3764270	3764569	.	+	0	ID=cds-WP_000137280.1;Parent=gene-PHA55_RS18350;Dbxref=Genbank:WP_000137280.1;Name=WP_000137280.1;gbkey=CDS;gene=ygaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417153.1;locus_tag=PHA55_RS18350;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WP_000137280.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3764579	3765103	.	+	.	ID=gene-PHA55_RS18355;Name=ygaP;gbkey=Gene;gene=ygaP;gene_biotype=protein_coding;locus_tag=PHA55_RS18355;old_locus_tag=PHA55_18350
NZ_CP116044.1	Protein Homology	CDS	3764579	3765103	.	+	0	ID=cds-WP_001229467.1;Parent=gene-PHA55_RS18355;Dbxref=Genbank:WP_001229467.1;Name=WP_001229467.1;gbkey=CDS;gene=ygaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708482.1;locus_tag=PHA55_RS18355;product=thiosulfate sulfurtransferase YgaP;protein_id=WP_001229467.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3765150	3765554	.	-	.	ID=gene-PHA55_RS18360;Name=stpA;gbkey=Gene;gene=stpA;gene_biotype=protein_coding;locus_tag=PHA55_RS18360;old_locus_tag=PHA55_18355
NZ_CP116044.1	Protein Homology	CDS	3765150	3765554	.	-	0	ID=cds-WP_088543659.1;Parent=gene-PHA55_RS18360;Dbxref=Genbank:WP_088543659.1;Name=WP_088543659.1;gbkey=CDS;gene=stpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311557.1;locus_tag=PHA55_RS18360;product=DNA-binding protein StpA;protein_id=WP_088543659.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3766222	3766671	.	+	.	ID=gene-PHA55_RS18365;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=PHA55_RS18365;old_locus_tag=PHA55_18360
NZ_CP116044.1	Protein Homology	CDS	3766222	3766671	.	+	0	ID=cds-WP_000492656.1;Parent=gene-PHA55_RS18365;Dbxref=Genbank:WP_000492656.1;Name=WP_000492656.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311558.1;locus_tag=PHA55_RS18365;product=L-alanine exporter AlaE;protein_id=WP_000492656.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3766708	3767052	.	-	.	ID=gene-PHA55_RS18370;Name=ygaC;gbkey=Gene;gene=ygaC;gene_biotype=protein_coding;locus_tag=PHA55_RS18370;old_locus_tag=PHA55_18365
NZ_CP116044.1	Protein Homology	CDS	3766708	3767052	.	-	0	ID=cds-WP_000281320.1;Parent=gene-PHA55_RS18370;Dbxref=Genbank:WP_000281320.1;Name=WP_000281320.1;gbkey=CDS;gene=ygaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311559.1;locus_tag=PHA55_RS18370;product=DUF2002 family protein;protein_id=WP_000281320.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3767204	3767533	.	+	.	ID=gene-PHA55_RS18375;Name=ygaM;gbkey=Gene;gene=ygaM;gene_biotype=protein_coding;locus_tag=PHA55_RS18375;old_locus_tag=PHA55_18370
NZ_CP116044.1	Protein Homology	CDS	3767204	3767533	.	+	0	ID=cds-WP_001295174.1;Parent=gene-PHA55_RS18375;Dbxref=Genbank:WP_001295174.1;Name=WP_001295174.1;gbkey=CDS;gene=ygaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311560.2;locus_tag=PHA55_RS18375;product=DUF883 domain-containing protein;protein_id=WP_001295174.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3767781	3768026	.	+	.	ID=gene-PHA55_RS18380;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=PHA55_RS18380;old_locus_tag=PHA55_18375
NZ_CP116044.1	Protein Homology	CDS	3767781	3768026	.	+	0	ID=cds-WP_001223227.1;Parent=gene-PHA55_RS18380;Dbxref=Genbank:WP_001223227.1;Name=WP_001223227.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311563.1;locus_tag=PHA55_RS18380;product=glutaredoxin-like protein NrdH;protein_id=WP_001223227.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3768023	3768433	.	+	.	ID=gene-PHA55_RS18385;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=PHA55_RS18385;old_locus_tag=PHA55_18380
NZ_CP116044.1	Protein Homology	CDS	3768023	3768433	.	+	0	ID=cds-WP_000080947.1;Parent=gene-PHA55_RS18385;Dbxref=Genbank:WP_000080947.1;Name=WP_000080947.1;Ontology_term=GO:0009263;gbkey=CDS;gene=nrdI;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311564.1;locus_tag=PHA55_RS18385;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_000080947.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3768406	3770550	.	+	.	ID=gene-PHA55_RS18390;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=PHA55_RS18390;old_locus_tag=PHA55_18385
NZ_CP116044.1	Protein Homology	CDS	3768406	3770550	.	+	0	ID=cds-WP_000246540.1;Parent=gene-PHA55_RS18390;Dbxref=Genbank:WP_000246540.1;Name=WP_000246540.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311565.1;locus_tag=PHA55_RS18390;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_000246540.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3770560	3771519	.	+	.	ID=gene-PHA55_RS18395;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=PHA55_RS18395;old_locus_tag=PHA55_18390
NZ_CP116044.1	Protein Homology	CDS	3770560	3771519	.	+	0	ID=cds-WP_000777969.1;Parent=gene-PHA55_RS18395;Dbxref=Genbank:WP_000777969.1;Name=WP_000777969.1;Ontology_term=GO:0009265,GO:0004748,GO:0030145,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,manganese ion binding|0030145||IEA;go_process=2'-deoxyribonucleotide biosynthetic process|0009265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417162.1;locus_tag=PHA55_RS18395;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000777969.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3771874	3773076	.	+	.	ID=gene-PHA55_RS18400;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=PHA55_RS18400;old_locus_tag=PHA55_18395
NZ_CP116044.1	Protein Homology	CDS	3771874	3773076	.	+	0	ID=cds-WP_000985494.1;Parent=gene-PHA55_RS18400;Dbxref=Genbank:WP_000985494.1;Name=WP_000985494.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417163.1;locus_tag=PHA55_RS18400;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_000985494.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3773069	3774133	.	+	.	ID=gene-PHA55_RS18405;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=PHA55_RS18405;old_locus_tag=PHA55_18400
NZ_CP116044.1	Protein Homology	CDS	3773069	3774133	.	+	0	ID=cds-WP_000774996.1;Parent=gene-PHA55_RS18405;Dbxref=Genbank:WP_000774996.1;Name=WP_000774996.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311568.1;locus_tag=PHA55_RS18405;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WP_000774996.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3774190	3775182	.	+	.	ID=gene-PHA55_RS18410;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=PHA55_RS18410;old_locus_tag=PHA55_18405
NZ_CP116044.1	Protein Homology	CDS	3774190	3775182	.	+	0	ID=cds-WP_001216521.1;Parent=gene-PHA55_RS18410;Dbxref=Genbank:WP_001216521.1;Name=WP_001216521.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311569.1;locus_tag=PHA55_RS18410;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_001216521.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3775474	3776658	.	+	.	ID=gene-PHA55_RS18415;Name=PHA55_RS18415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS18415;old_locus_tag=PHA55_18410
NZ_CP116044.1	Protein Homology	CDS	3775474	3776658	.	+	0	ID=cds-WP_000165699.1;Parent=gene-PHA55_RS18415;Dbxref=Genbank:WP_000165699.1;Name=WP_000165699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311570.1;locus_tag=PHA55_RS18415;product=MFS transporter;protein_id=WP_000165699.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3776782	3777519	.	+	.	ID=gene-PHA55_RS18420;Name=ygaZ;gbkey=Gene;gene=ygaZ;gene_biotype=protein_coding;locus_tag=PHA55_RS18420;old_locus_tag=PHA55_18415
NZ_CP116044.1	Protein Homology	CDS	3776782	3777519	.	+	0	ID=cds-WP_000445658.1;Parent=gene-PHA55_RS18420;Dbxref=Genbank:WP_000445658.1;Name=WP_000445658.1;gbkey=CDS;gene=ygaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311571.1;locus_tag=PHA55_RS18420;product=L-valine exporter subunit YgaZ;protein_id=WP_000445658.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3777509	3777844	.	+	.	ID=gene-PHA55_RS18425;Name=ygaH;gbkey=Gene;gene=ygaH;gene_biotype=protein_coding;locus_tag=PHA55_RS18425;old_locus_tag=PHA55_18420
NZ_CP116044.1	Protein Homology	CDS	3777509	3777844	.	+	0	ID=cds-WP_000119763.1;Parent=gene-PHA55_RS18425;Dbxref=Genbank:WP_000119763.1;Name=WP_000119763.1;gbkey=CDS;gene=ygaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417168.1;locus_tag=PHA55_RS18425;product=L-valine transporter subunit YgaH;protein_id=WP_000119763.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3777935	3778465	.	+	.	ID=gene-PHA55_RS18430;Name=emrR;gbkey=Gene;gene=emrR;gene_biotype=protein_coding;locus_tag=PHA55_RS18430;old_locus_tag=PHA55_18425
NZ_CP116044.1	Protein Homology	CDS	3777935	3778465	.	+	0	ID=cds-WP_000378442.1;Parent=gene-PHA55_RS18430;Dbxref=Genbank:WP_000378442.1;Name=WP_000378442.1;gbkey=CDS;gene=emrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311573.1;locus_tag=PHA55_RS18430;product=multidrug efflux transporter EmrAB transcriptional repressor EmrR;protein_id=WP_000378442.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3778592	3779764	.	+	.	ID=gene-PHA55_RS18435;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=PHA55_RS18435;old_locus_tag=PHA55_18430
NZ_CP116044.1	Protein Homology	CDS	3778592	3779764	.	+	0	ID=cds-WP_001295175.1;Parent=gene-PHA55_RS18435;Dbxref=Genbank:WP_001295175.1;Name=WP_001295175.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311574.1;locus_tag=PHA55_RS18435;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=WP_001295175.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3779781	3781319	.	+	.	ID=gene-PHA55_RS18440;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=PHA55_RS18440;old_locus_tag=PHA55_18435
NZ_CP116044.1	Protein Homology	CDS	3779781	3781319	.	+	0	ID=cds-WP_001295176.1;Parent=gene-PHA55_RS18440;Dbxref=Genbank:WP_001295176.1;Name=WP_001295176.1;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311575.1;locus_tag=PHA55_RS18440;product=multidrug efflux MFS transporter permease subunit EmrB;protein_id=WP_001295176.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3781383	3781898	.	-	.	ID=gene-PHA55_RS18445;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=PHA55_RS18445;old_locus_tag=PHA55_18440
NZ_CP116044.1	Protein Homology	CDS	3781383	3781898	.	-	0	ID=cds-WP_271287471.1;Parent=gene-PHA55_RS18445;Dbxref=Genbank:WP_271287471.1;Name=WP_271287471.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=PHA55_RS18445;product=S-ribosylhomocysteine lyase;protein_id=WP_271287471.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3782048	3783604	.	-	.	ID=gene-PHA55_RS18450;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=PHA55_RS18450;old_locus_tag=PHA55_18445
NZ_CP116044.1	Protein Homology	CDS	3782048	3783604	.	-	0	ID=cds-WP_000611804.1;Parent=gene-PHA55_RS18450;Dbxref=Genbank:WP_000611804.1;Name=WP_000611804.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417173.1;locus_tag=PHA55_RS18450;product=glutamate--cysteine ligase;protein_id=WP_000611804.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3783677	3784105	.	-	.	ID=gene-PHA55_RS18455;Name=yqaA;gbkey=Gene;gene=yqaA;gene_biotype=protein_coding;locus_tag=PHA55_RS18455;old_locus_tag=PHA55_18450
NZ_CP116044.1	Protein Homology	CDS	3783677	3784105	.	-	0	ID=cds-WP_001287457.1;Parent=gene-PHA55_RS18455;Dbxref=Genbank:WP_001287457.1;Name=WP_001287457.1;gbkey=CDS;gene=yqaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417174.1;locus_tag=PHA55_RS18455;product=YqaA family protein;protein_id=WP_001287457.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3784102	3784668	.	-	.	ID=gene-PHA55_RS18460;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=PHA55_RS18460;old_locus_tag=PHA55_18455
NZ_CP116044.1	Protein Homology	CDS	3784102	3784668	.	-	0	ID=cds-WP_000273309.1;Parent=gene-PHA55_RS18460;Dbxref=Genbank:WP_000273309.1;Name=WP_000273309.1;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311579.1;locus_tag=PHA55_RS18460;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=WP_000273309.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3784949	3785025	.	-	.	ID=gene-PHA55_RS18465;Name=PHA55_RS18465;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS18465;old_locus_tag=PHA55_18460
NZ_CP116044.1	tRNAscan-SE	tRNA	3784949	3785025	.	-	.	ID=rna-PHA55_RS18465;Parent=gene-PHA55_RS18465;anticodon=(pos:complement(3784989..3784991));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS18465;product=tRNA-Arg
NZ_CP116044.1	tRNAscan-SE	exon	3784949	3785025	.	-	.	ID=exon-PHA55_RS18465-1;Parent=rna-PHA55_RS18465;anticodon=(pos:complement(3784989..3784991));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS18465;product=tRNA-Arg
NZ_CP116044.1	RefSeq	gene	3785224	3785300	.	-	.	ID=gene-PHA55_RS18470;Name=PHA55_RS18470;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS18470;old_locus_tag=PHA55_18465
NZ_CP116044.1	tRNAscan-SE	tRNA	3785224	3785300	.	-	.	ID=rna-PHA55_RS18470;Parent=gene-PHA55_RS18470;anticodon=(pos:complement(3785264..3785266));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS18470;product=tRNA-Arg
NZ_CP116044.1	tRNAscan-SE	exon	3785224	3785300	.	-	.	ID=exon-PHA55_RS18470-1;Parent=rna-PHA55_RS18470;anticodon=(pos:complement(3785264..3785266));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS18470;product=tRNA-Arg
NZ_CP116044.1	RefSeq	gene	3785499	3785575	.	-	.	ID=gene-PHA55_RS18475;Name=PHA55_RS18475;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS18475;old_locus_tag=PHA55_18470
NZ_CP116044.1	tRNAscan-SE	tRNA	3785499	3785575	.	-	.	ID=rna-PHA55_RS18475;Parent=gene-PHA55_RS18475;anticodon=(pos:complement(3785539..3785541));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS18475;product=tRNA-Arg
NZ_CP116044.1	tRNAscan-SE	exon	3785499	3785575	.	-	.	ID=exon-PHA55_RS18475-1;Parent=rna-PHA55_RS18475;anticodon=(pos:complement(3785539..3785541));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS18475;product=tRNA-Arg
NZ_CP116044.1	RefSeq	gene	3785773	3785849	.	-	.	ID=gene-PHA55_RS18480;Name=PHA55_RS18480;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS18480;old_locus_tag=PHA55_18475
NZ_CP116044.1	tRNAscan-SE	tRNA	3785773	3785849	.	-	.	ID=rna-PHA55_RS18480;Parent=gene-PHA55_RS18480;anticodon=(pos:complement(3785813..3785815));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS18480;product=tRNA-Arg
NZ_CP116044.1	tRNAscan-SE	exon	3785773	3785849	.	-	.	ID=exon-PHA55_RS18480-1;Parent=rna-PHA55_RS18480;anticodon=(pos:complement(3785813..3785815));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS18480;product=tRNA-Arg
NZ_CP116044.1	RefSeq	gene	3785853	3785945	.	-	.	ID=gene-PHA55_RS18485;Name=PHA55_RS18485;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS18485;old_locus_tag=PHA55_18480
NZ_CP116044.1	tRNAscan-SE	tRNA	3785853	3785945	.	-	.	ID=rna-PHA55_RS18485;Parent=gene-PHA55_RS18485;anticodon=(pos:complement(3785909..3785911));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS18485;product=tRNA-Ser
NZ_CP116044.1	tRNAscan-SE	exon	3785853	3785945	.	-	.	ID=exon-PHA55_RS18485-1;Parent=rna-PHA55_RS18485;anticodon=(pos:complement(3785909..3785911));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS18485;product=tRNA-Ser
NZ_CP116044.1	RefSeq	gene	3786261	3786446	.	-	.	ID=gene-PHA55_RS18490;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=PHA55_RS18490;old_locus_tag=PHA55_18485
NZ_CP116044.1	Protein Homology	CDS	3786261	3786446	.	-	0	ID=cds-WP_000906486.1;Parent=gene-PHA55_RS18490;Dbxref=Genbank:WP_000906486.1;Name=WP_000906486.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=PHA55_RS18490;product=carbon storage regulator CsrA;protein_id=WP_000906486.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3786681	3789311	.	-	.	ID=gene-PHA55_RS18495;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=PHA55_RS18495;old_locus_tag=PHA55_18490
NZ_CP116044.1	Protein Homology	CDS	3786681	3789311	.	-	0	ID=cds-WP_000047176.1;Parent=gene-PHA55_RS18495;Dbxref=Genbank:WP_000047176.1;Name=WP_000047176.1;Ontology_term=GO:0006419,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311581.1;locus_tag=PHA55_RS18495;product=alanine--tRNA ligase;protein_id=WP_000047176.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3789439	3789939	.	-	.	ID=gene-PHA55_RS18500;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=PHA55_RS18500;old_locus_tag=PHA55_18495
NZ_CP116044.1	Protein Homology	CDS	3789439	3789939	.	-	0	ID=cds-WP_000140506.1;Parent=gene-PHA55_RS18500;Dbxref=Genbank:WP_000140506.1;Name=WP_000140506.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311582.1;locus_tag=PHA55_RS18500;product=recombination regulator RecX;protein_id=WP_000140506.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3790182	3791243	.	-	.	ID=gene-PHA55_RS18505;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=PHA55_RS18505;old_locus_tag=PHA55_18500
NZ_CP116044.1	Protein Homology	CDS	3790182	3791243	.	-	0	ID=cds-WP_000963143.1;Parent=gene-PHA55_RS18505;Dbxref=Genbank:WP_000963143.1;Name=WP_000963143.1;Ontology_term=GO:0006281,GO:0006310,GO:0009432,GO:0003677,GO:0008094,GO:0005737;gbkey=CDS;gene=recA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311583.1;locus_tag=PHA55_RS18505;product=recombinase RecA;protein_id=WP_000963143.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3791323	3791820	.	-	.	ID=gene-PHA55_RS18510;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=PHA55_RS18510;old_locus_tag=PHA55_18505
NZ_CP116044.1	Protein Homology	CDS	3791323	3791820	.	-	0	ID=cds-WP_000132231.1;Parent=gene-PHA55_RS18510;Dbxref=Genbank:WP_000132231.1;Name=WP_000132231.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417180.1;locus_tag=PHA55_RS18510;product=nicotinamide-nucleotide amidase;protein_id=WP_000132231.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3791965	3793050	.	-	.	ID=gene-PHA55_RS18515;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=PHA55_RS18515;old_locus_tag=PHA55_18510
NZ_CP116044.1	Protein Homology	CDS	3791965	3793050	.	-	0	ID=cds-WP_001295177.1;Parent=gene-PHA55_RS18515;Dbxref=Genbank:WP_001295177.1;Name=WP_001295177.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417181.1;locus_tag=PHA55_RS18515;product=lytic murein transglycosylase B;protein_id=WP_001295177.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3793306	3793869	.	+	.	ID=gene-PHA55_RS18520;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;gene_synonym=gutA;locus_tag=PHA55_RS18520;old_locus_tag=PHA55_18515
NZ_CP116044.1	Protein Homology	CDS	3793306	3793869	.	+	0	ID=cds-WP_000573321.1;Parent=gene-PHA55_RS18520;Dbxref=Genbank:WP_000573321.1;Name=WP_000573321.1;gbkey=CDS;gene=srlA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026180.1;locus_tag=PHA55_RS18520;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=WP_000573321.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3793866	3794825	.	+	.	ID=gene-PHA55_RS18525;Name=srlE;gbkey=Gene;gene=srlE;gene_biotype=protein_coding;gene_synonym=gutE;locus_tag=PHA55_RS18525;old_locus_tag=PHA55_18520
NZ_CP116044.1	Protein Homology	CDS	3793866	3794825	.	+	0	ID=cds-WP_000148875.1;Parent=gene-PHA55_RS18525;Dbxref=Genbank:WP_000148875.1;Name=WP_000148875.1;gbkey=CDS;gene=srlE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026181.1;locus_tag=PHA55_RS18525;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=WP_000148875.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3794836	3795207	.	+	.	ID=gene-PHA55_RS18530;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=gutB;locus_tag=PHA55_RS18530;old_locus_tag=PHA55_18525
NZ_CP116044.1	Protein Homology	CDS	3794836	3795207	.	+	0	ID=cds-WP_001594405.1;Parent=gene-PHA55_RS18530;Dbxref=Genbank:WP_001594405.1;Name=WP_001594405.1;gbkey=CDS;gene=srlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311587.1;locus_tag=PHA55_RS18530;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WP_001594405.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3795211	3795990	.	+	.	ID=gene-PHA55_RS18535;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=PHA55_RS18535;old_locus_tag=PHA55_18530
NZ_CP116044.1	Protein Homology	CDS	3795211	3795990	.	+	0	ID=cds-WP_001077358.1;Parent=gene-PHA55_RS18535;Dbxref=Genbank:WP_001077358.1;Name=WP_001077358.1;Ontology_term=GO:0016491;gbkey=CDS;gene=srlD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417185.1;locus_tag=PHA55_RS18535;product=sorbitol-6-phosphate dehydrogenase;protein_id=WP_001077358.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3796095	3796454	.	+	.	ID=gene-PHA55_RS18540;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=PHA55_RS18540;old_locus_tag=PHA55_18535
NZ_CP116044.1	Protein Homology	CDS	3796095	3796454	.	+	0	ID=cds-WP_000252908.1;Parent=gene-PHA55_RS18540;Dbxref=Genbank:WP_000252908.1;Name=WP_000252908.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417186.1;locus_tag=PHA55_RS18540;product=transcriptional regulator GutM;protein_id=WP_000252908.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3796521	3797294	.	+	.	ID=gene-PHA55_RS18545;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=gutR;locus_tag=PHA55_RS18545;old_locus_tag=PHA55_18540
NZ_CP116044.1	Protein Homology	CDS	3796521	3797294	.	+	0	ID=cds-WP_000804546.1;Parent=gene-PHA55_RS18545;Dbxref=Genbank:WP_000804546.1;Name=WP_000804546.1;gbkey=CDS;gene=srlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417187.1;locus_tag=PHA55_RS18545;product=glucitol operon DNA-binding transcriptional repressor SrlR;protein_id=WP_000804546.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3797287	3798252	.	+	.	ID=gene-PHA55_RS18550;Name=gutQ;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=PHA55_RS18550;old_locus_tag=PHA55_18545
NZ_CP116044.1	Protein Homology	CDS	3797287	3798252	.	+	0	ID=cds-WP_001287446.1;Parent=gene-PHA55_RS18550;Dbxref=Genbank:WP_001287446.1;Name=WP_001287446.1;gbkey=CDS;gene=gutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311591.2;locus_tag=PHA55_RS18550;product=arabinose-5-phosphate isomerase GutQ;protein_id=WP_001287446.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3798249	3799763	.	-	.	ID=gene-PHA55_RS18555;Name=norR;gbkey=Gene;gene=norR;gene_biotype=protein_coding;locus_tag=PHA55_RS18555;old_locus_tag=PHA55_18550
NZ_CP116044.1	Protein Homology	CDS	3798249	3799763	.	-	0	ID=cds-WP_001594406.1;Parent=gene-PHA55_RS18555;Dbxref=Genbank:WP_001594406.1;Name=WP_001594406.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=norR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311592.2;locus_tag=PHA55_RS18555;product=nitric oxide reductase transcriptional regulator NorR;protein_id=WP_001594406.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3799950	3801389	.	+	.	ID=gene-PHA55_RS18560;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=PHA55_RS18560;old_locus_tag=PHA55_18555
NZ_CP116044.1	Protein Homology	CDS	3799950	3801389	.	+	0	ID=cds-WP_000029608.1;Parent=gene-PHA55_RS18560;Dbxref=Genbank:WP_000029608.1;Name=WP_000029608.1;Ontology_term=GO:0009055,GO:0010181,GO:0016966,GO:0046872;gbkey=CDS;gene=norV;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,nitric oxide reductase activity|0016966||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708517.1;locus_tag=PHA55_RS18560;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=WP_000029608.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3801386	3802519	.	+	.	ID=gene-PHA55_RS18565;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=PHA55_RS18565;old_locus_tag=PHA55_18560
NZ_CP116044.1	Protein Homology	CDS	3801386	3802519	.	+	0	ID=cds-WP_000064735.1;Parent=gene-PHA55_RS18565;Dbxref=Genbank:WP_000064735.1;Name=WP_000064735.1;Ontology_term=GO:0016731;gbkey=CDS;gene=norW;go_function=oxidoreductase activity%2C acting on iron-sulfur proteins as donors%2C NAD or NADP as acceptor|0016731||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708518.1;locus_tag=PHA55_RS18565;product=NADH:flavorubredoxin reductase NorW;protein_id=WP_000064735.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3802939	3805191	.	-	.	ID=gene-PHA55_RS18570;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=PHA55_RS18570;old_locus_tag=PHA55_18565
NZ_CP116044.1	Protein Homology	CDS	3802939	3805191	.	-	0	ID=cds-WP_001107688.1;Parent=gene-PHA55_RS18570;Dbxref=Genbank:WP_001107688.1;Name=WP_001107688.1;Ontology_term=GO:0036211,GO:0003998;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417192.1;locus_tag=PHA55_RS18570;product=carbamoyltransferase HypF;protein_id=WP_001107688.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3805344	3805871	.	-	.	ID=gene-PHA55_RS18575;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=PHA55_RS18575;old_locus_tag=PHA55_18570
NZ_CP116044.1	Protein Homology	CDS	3805344	3805871	.	-	0	ID=cds-WP_001078777.1;Parent=gene-PHA55_RS18575;Dbxref=Genbank:WP_001078777.1;Name=WP_001078777.1;gbkey=CDS;gene=hydN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311596.1;locus_tag=PHA55_RS18575;product=electron transport protein HydN;protein_id=WP_001078777.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3806020	3807030	.	-	.	ID=gene-PHA55_RS18580;Name=ascG;gbkey=Gene;gene=ascG;gene_biotype=protein_coding;locus_tag=PHA55_RS18580;old_locus_tag=PHA55_18575
NZ_CP116044.1	Protein Homology	CDS	3806020	3807030	.	-	0	ID=cds-WP_042099590.1;Parent=gene-PHA55_RS18580;Dbxref=Genbank:WP_042099590.1;Name=WP_042099590.1;gbkey=CDS;gene=ascG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708521.2;locus_tag=PHA55_RS18580;product=DNA-binding transcriptional regulator AscG;protein_id=WP_042099590.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3807290	3808747	.	+	.	ID=gene-PHA55_RS18585;Name=ascF;gbkey=Gene;gene=ascF;gene_biotype=protein_coding;locus_tag=PHA55_RS18585;old_locus_tag=PHA55_18580
NZ_CP116044.1	Protein Homology	CDS	3807290	3808747	.	+	0	ID=cds-WP_001107857.1;Parent=gene-PHA55_RS18585;Dbxref=Genbank:WP_001107857.1;Name=WP_001107857.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=ascF;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311598.1;locus_tag=PHA55_RS18585;product=PTS cellobiose/arbutin/salicin transporter subunit IIBC;protein_id=WP_001107857.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3808756	3810180	.	+	.	ID=gene-PHA55_RS18590;Name=ascB;gbkey=Gene;gene=ascB;gene_biotype=protein_coding;locus_tag=PHA55_RS18590;old_locus_tag=PHA55_18585
NZ_CP116044.1	Protein Homology	CDS	3808756	3810180	.	+	0	ID=cds-WP_000110316.1;Parent=gene-PHA55_RS18590;Dbxref=Genbank:WP_000110316.1;Name=WP_000110316.1;gbkey=CDS;gene=ascB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417196.1;locus_tag=PHA55_RS18590;product=6-phospho-beta-glucosidase AscB;protein_id=WP_000110316.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3810339	3810809	.	-	.	ID=gene-PHA55_RS18595;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=PHA55_RS18595;old_locus_tag=PHA55_18590
NZ_CP116044.1	Protein Homology	CDS	3810339	3810809	.	-	0	ID=cds-WP_000132962.1;Parent=gene-PHA55_RS18595;Dbxref=Genbank:WP_000132962.1;Name=WP_000132962.1;Ontology_term=GO:0036211,GO:0004190;gbkey=CDS;gene=hycI;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311600.1;locus_tag=PHA55_RS18595;product=hydrogenase maturation peptidase HycI;protein_id=WP_000132962.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3810802	3811212	.	-	.	ID=gene-PHA55_RS18600;Name=hycH;gbkey=Gene;gene=hycH;gene_biotype=protein_coding;locus_tag=PHA55_RS18600;old_locus_tag=PHA55_18595
NZ_CP116044.1	Protein Homology	CDS	3810802	3811212	.	-	0	ID=cds-WP_001291921.1;Parent=gene-PHA55_RS18600;Dbxref=Genbank:WP_001291921.1;Name=WP_001291921.1;gbkey=CDS;gene=hycH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311601.1;locus_tag=PHA55_RS18600;product=formate hydrogenlyase assembly protein HycH;protein_id=WP_001291921.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3811209	3811976	.	-	.	ID=gene-PHA55_RS18605;Name=hycG;gbkey=Gene;gene=hycG;gene_biotype=protein_coding;locus_tag=PHA55_RS18605;old_locus_tag=PHA55_18600
NZ_CP116044.1	Protein Homology	CDS	3811209	3811976	.	-	0	ID=cds-WP_000067399.1;Parent=gene-PHA55_RS18605;Dbxref=Genbank:WP_000067399.1;Name=WP_000067399.1;gbkey=CDS;gene=hycG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311602.1;locus_tag=PHA55_RS18605;product=formate hydrogenlyase subunit HycG;protein_id=WP_000067399.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3811976	3812518	.	-	.	ID=gene-PHA55_RS18610;Name=hycF;gbkey=Gene;gene=hycF;gene_biotype=protein_coding;locus_tag=PHA55_RS18610;old_locus_tag=PHA55_18605
NZ_CP116044.1	Protein Homology	CDS	3811976	3812518	.	-	0	ID=cds-WP_000493792.1;Parent=gene-PHA55_RS18610;Dbxref=Genbank:WP_000493792.1;Name=WP_000493792.1;gbkey=CDS;gene=hycF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311603.1;locus_tag=PHA55_RS18610;product=formate hydrogenlyase subunit HycF;protein_id=WP_000493792.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3812528	3814237	.	-	.	ID=gene-PHA55_RS18615;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=PHA55_RS18615;old_locus_tag=PHA55_18610
NZ_CP116044.1	Protein Homology	CDS	3812528	3814237	.	-	0	ID=cds-WP_001288134.1;Parent=gene-PHA55_RS18615;Dbxref=Genbank:WP_001288134.1;Name=WP_001288134.1;gbkey=CDS;gene=hycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=PHA55_RS18615;product=formate hydrogenlyase subunit HycE;protein_id=WP_001288134.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3814255	3815178	.	-	.	ID=gene-PHA55_RS18620;Name=hycD;gbkey=Gene;gene=hycD;gene_biotype=protein_coding;locus_tag=PHA55_RS18620;old_locus_tag=PHA55_18615
NZ_CP116044.1	Protein Homology	CDS	3814255	3815178	.	-	0	ID=cds-WP_000115199.1;Parent=gene-PHA55_RS18620;Dbxref=Genbank:WP_000115199.1;Name=WP_000115199.1;gbkey=CDS;gene=hycD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417202.1;locus_tag=PHA55_RS18620;product=formate hydrogenlyase subunit HycD;protein_id=WP_000115199.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3815181	3817007	.	-	.	ID=gene-PHA55_RS18625;Name=hycC;gbkey=Gene;gene=hycC;gene_biotype=protein_coding;locus_tag=PHA55_RS18625;old_locus_tag=PHA55_18620
NZ_CP116044.1	Protein Homology	CDS	3815181	3817007	.	-	0	ID=cds-WP_001274407.1;Parent=gene-PHA55_RS18625;Dbxref=Genbank:WP_001274407.1;Name=WP_001274407.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hycC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311606.1;locus_tag=PHA55_RS18625;product=formate hydrogenlyase subunit 3;protein_id=WP_001274407.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3817004	3817615	.	-	.	ID=gene-PHA55_RS18630;Name=hycB;gbkey=Gene;gene=hycB;gene_biotype=protein_coding;locus_tag=PHA55_RS18630;old_locus_tag=PHA55_18625
NZ_CP116044.1	Protein Homology	CDS	3817004	3817615	.	-	0	ID=cds-WP_001079181.1;Parent=gene-PHA55_RS18630;Dbxref=Genbank:WP_001079181.1;Name=WP_001079181.1;gbkey=CDS;gene=hycB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311607.1;locus_tag=PHA55_RS18630;product=formate hydrogenlyase subunit HycB;protein_id=WP_001079181.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3817740	3818201	.	-	.	ID=gene-PHA55_RS18635;Name=hycA;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;locus_tag=PHA55_RS18635;old_locus_tag=PHA55_18630
NZ_CP116044.1	Protein Homology	CDS	3817740	3818201	.	-	0	ID=cds-WP_000158056.1;Parent=gene-PHA55_RS18635;Dbxref=Genbank:WP_000158056.1;Name=WP_000158056.1;gbkey=CDS;gene=hycA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311608.1;locus_tag=PHA55_RS18635;product=formate hydrogenlyase regulator HycA;protein_id=WP_000158056.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3818413	3818763	.	+	.	ID=gene-PHA55_RS18640;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=PHA55_RS18640;old_locus_tag=PHA55_18635
NZ_CP116044.1	Protein Homology	CDS	3818413	3818763	.	+	0	ID=cds-WP_001299100.1;Parent=gene-PHA55_RS18640;Dbxref=Genbank:WP_001299100.1;Name=WP_001299100.1;Ontology_term=GO:0036211,GO:0008901;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311609.1;locus_tag=PHA55_RS18640;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_001299100.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3818767	3819639	.	+	.	ID=gene-PHA55_RS18645;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=PHA55_RS18645;old_locus_tag=PHA55_18640
NZ_CP116044.1	Protein Homology	CDS	3818767	3819639	.	+	0	ID=cds-WP_065807653.1;Parent=gene-PHA55_RS18645;Dbxref=Genbank:WP_065807653.1;Name=WP_065807653.1;Ontology_term=GO:0051604,GO:0003924,GO:0016151;gbkey=CDS;gene=hypB;go_function=GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311610.1;locus_tag=PHA55_RS18645;product=hydrogenase nickel incorporation protein HypB;protein_id=WP_065807653.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3819630	3819902	.	+	.	ID=gene-PHA55_RS18650;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=PHA55_RS18650;old_locus_tag=PHA55_18645
NZ_CP116044.1	Protein Homology	CDS	3819630	3819902	.	+	0	ID=cds-WP_000334881.1;Parent=gene-PHA55_RS18650;Dbxref=Genbank:WP_000334881.1;Name=WP_000334881.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311611.1;locus_tag=PHA55_RS18650;product=hydrogenase 3 maturation protein HypC;protein_id=WP_000334881.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3819902	3821023	.	+	.	ID=gene-PHA55_RS18655;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=PHA55_RS18655;old_locus_tag=PHA55_18650
NZ_CP116044.1	Protein Homology	CDS	3819902	3821023	.	+	0	ID=cds-WP_001212982.1;Parent=gene-PHA55_RS18655;Dbxref=Genbank:WP_001212982.1;Name=WP_001212982.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708530.1;locus_tag=PHA55_RS18655;product=hydrogenase formation protein HypD;protein_id=WP_001212982.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3821020	3822030	.	+	.	ID=gene-PHA55_RS18660;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=PHA55_RS18660;old_locus_tag=PHA55_18655
NZ_CP116044.1	Protein Homology	CDS	3821020	3822030	.	+	0	ID=cds-WP_001059930.1;Parent=gene-PHA55_RS18660;Dbxref=Genbank:WP_001059930.1;Name=WP_001059930.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417210.2;locus_tag=PHA55_RS18660;product=hydrogenase maturation carbamoyl dehydratase HypE;protein_id=WP_001059930.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3822104	3824182	.	+	.	ID=gene-PHA55_RS18665;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=PHA55_RS18665;old_locus_tag=PHA55_18660
NZ_CP116044.1	Protein Homology	CDS	3822104	3824182	.	+	0	ID=cds-WP_219385179.1;Parent=gene-PHA55_RS18665;Dbxref=Genbank:WP_219385179.1;Name=WP_219385179.1;Ontology_term=GO:0006355,GO:0005515,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=flhA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311614.1;locus_tag=PHA55_RS18665;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=WP_219385179.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3824219	3824572	.	-	.	ID=gene-PHA55_RS18670;Name=ygbA;gbkey=Gene;gene=ygbA;gene_biotype=protein_coding;locus_tag=PHA55_RS18670;old_locus_tag=PHA55_18665
NZ_CP116044.1	Protein Homology	CDS	3824219	3824572	.	-	0	ID=cds-WP_000015498.1;Parent=gene-PHA55_RS18670;Dbxref=Genbank:WP_000015498.1;Name=WP_000015498.1;gbkey=CDS;gene=ygbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708533.1;locus_tag=PHA55_RS18670;product=nitrous oxide-stimulated promoter family protein;protein_id=WP_000015498.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3824604	3824783	.	-	.	ID=gene-PHA55_RS18675;Name=PHA55_RS18675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS18675;old_locus_tag=PHA55_18670
NZ_CP116044.1	Protein Homology	CDS	3824604	3824783	.	-	0	ID=cds-WP_000611928.1;Parent=gene-PHA55_RS18675;Dbxref=Genbank:WP_000611928.1;Name=WP_000611928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001363568.1;locus_tag=PHA55_RS18675;product=hypothetical protein;protein_id=WP_000611928.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3824859	3827420	.	+	.	ID=gene-PHA55_RS18680;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=PHA55_RS18680;old_locus_tag=PHA55_18675
NZ_CP116044.1	Protein Homology	CDS	3824859	3827420	.	+	0	ID=cds-WP_001272898.1;Parent=gene-PHA55_RS18680;Dbxref=Genbank:WP_001272898.1;Name=WP_001272898.1;Ontology_term=GO:0006298,GO:0005524;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311616.1;locus_tag=PHA55_RS18680;product=DNA mismatch repair protein MutS;protein_id=WP_001272898.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3827526	3828182	.	+	.	ID=gene-PHA55_RS18685;Name=pphB;gbkey=Gene;gene=pphB;gene_biotype=protein_coding;locus_tag=PHA55_RS18685;old_locus_tag=PHA55_18680
NZ_CP116044.1	Protein Homology	CDS	3827526	3828182	.	+	0	ID=cds-WP_001141333.1;Parent=gene-PHA55_RS18685;Dbxref=Genbank:WP_001141333.1;Name=WP_001141333.1;gbkey=CDS;gene=pphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311617.1;locus_tag=PHA55_RS18685;product=protein-serine/threonine phosphatase;protein_id=WP_001141333.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3828233	3829000	.	-	.	ID=gene-PHA55_RS18690;Name=ygbI;gbkey=Gene;gene=ygbI;gene_biotype=protein_coding;locus_tag=PHA55_RS18690;old_locus_tag=PHA55_18685
NZ_CP116044.1	Protein Homology	CDS	3828233	3829000	.	-	0	ID=cds-WP_001297141.1;Parent=gene-PHA55_RS18690;Dbxref=Genbank:WP_001297141.1;Name=WP_001297141.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ygbI;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417215.2;locus_tag=PHA55_RS18690;product=DNA-binding transcriptional repressor YgbI;protein_id=WP_001297141.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3829196	3830104	.	+	.	ID=gene-PHA55_RS18695;Name=ygbJ;gbkey=Gene;gene=ygbJ;gene_biotype=protein_coding;locus_tag=PHA55_RS18695;old_locus_tag=PHA55_18690
NZ_CP116044.1	Protein Homology	CDS	3829196	3830104	.	+	0	ID=cds-WP_000847985.1;Parent=gene-PHA55_RS18695;Dbxref=Genbank:WP_000847985.1;Name=WP_000847985.1;gbkey=CDS;gene=ygbJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417216.1;locus_tag=PHA55_RS18695;product=NAD(P)-dependent oxidoreductase;protein_id=WP_000847985.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3830101	3831363	.	+	.	ID=gene-PHA55_RS18700;Name=ygbK;gbkey=Gene;gene=ygbK;gene_biotype=protein_coding;locus_tag=PHA55_RS18700;old_locus_tag=PHA55_18695
NZ_CP116044.1	Protein Homology	CDS	3830101	3831363	.	+	0	ID=cds-WP_000590392.1;Parent=gene-PHA55_RS18700;Dbxref=Genbank:WP_000590392.1;Name=WP_000590392.1;gbkey=CDS;gene=ygbK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001649192.1;locus_tag=PHA55_RS18700;product=3-oxo-tetronate kinase;protein_id=WP_000590392.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3831360	3831998	.	+	.	ID=gene-PHA55_RS18705;Name=ygbL;gbkey=Gene;gene=ygbL;gene_biotype=protein_coding;locus_tag=PHA55_RS18705;old_locus_tag=PHA55_18700
NZ_CP116044.1	Protein Homology	CDS	3831360	3831998	.	+	0	ID=cds-WP_001278994.1;Parent=gene-PHA55_RS18705;Dbxref=Genbank:WP_001278994.1;Name=WP_001278994.1;gbkey=CDS;gene=ygbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417218.1;locus_tag=PHA55_RS18705;product=aldolase;protein_id=WP_001278994.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3832003	3832779	.	+	.	ID=gene-PHA55_RS18710;Name=ygbM;gbkey=Gene;gene=ygbM;gene_biotype=protein_coding;locus_tag=PHA55_RS18710;old_locus_tag=PHA55_18705
NZ_CP116044.1	Protein Homology	CDS	3832003	3832779	.	+	0	ID=cds-WP_001136918.1;Parent=gene-PHA55_RS18710;Dbxref=Genbank:WP_001136918.1;Name=WP_001136918.1;gbkey=CDS;gene=ygbM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417219.1;locus_tag=PHA55_RS18710;product=HPr family phosphocarrier protein;protein_id=WP_001136918.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3832868	3834232	.	+	.	ID=gene-PHA55_RS18715;Name=ygbN;gbkey=Gene;gene=ygbN;gene_biotype=protein_coding;locus_tag=PHA55_RS18715;old_locus_tag=PHA55_18710
NZ_CP116044.1	Protein Homology	CDS	3832868	3834232	.	+	0	ID=cds-WP_000104439.1;Parent=gene-PHA55_RS18715;Dbxref=Genbank:WP_000104439.1;Name=WP_000104439.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=ygbN;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417220.1;locus_tag=PHA55_RS18715;product=GntP family transporter;protein_id=WP_000104439.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3834271	3834507	.	-	.	ID=gene-PHA55_RS18720;Name=PHA55_RS18720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS18720;old_locus_tag=PHA55_18715
NZ_CP116044.1	Protein Homology	CDS	3834271	3834507	.	-	0	ID=cds-WP_000562984.1;Parent=gene-PHA55_RS18720;Dbxref=Genbank:WP_000562984.1;Name=WP_000562984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311618.1;locus_tag=PHA55_RS18720;product=non-oxidative hydroxyarylic acid decarboxylases subunit D;protein_id=WP_000562984.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3834518	3835945	.	-	.	ID=gene-PHA55_RS18725;Name=PHA55_RS18725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS18725;old_locus_tag=PHA55_18720
NZ_CP116044.1	Protein Homology	CDS	3834518	3835945	.	-	0	ID=cds-WP_000863195.1;Parent=gene-PHA55_RS18725;Dbxref=Genbank:WP_000863195.1;Name=WP_000863195.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311619.1;locus_tag=PHA55_RS18725;product=non-oxidative hydroxyarylic acid decarboxylases subunit C;protein_id=WP_000863195.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3835945	3836538	.	-	.	ID=gene-PHA55_RS18730;Name=PHA55_RS18730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS18730;old_locus_tag=PHA55_18725
NZ_CP116044.1	Protein Homology	CDS	3835945	3836538	.	-	0	ID=cds-WP_000767707.1;Parent=gene-PHA55_RS18730;Dbxref=Genbank:WP_000767707.1;Name=WP_000767707.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708544.1;locus_tag=PHA55_RS18730;product=non-oxidative hydroxyarylic acid decarboxylases subunit B;protein_id=WP_000767707.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3836685	3837092	.	+	.	ID=gene-PHA55_RS18735;Name=PHA55_RS18735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS18735;old_locus_tag=PHA55_18730
NZ_CP116044.1	Protein Homology	CDS	3836685	3837092	.	+	0	ID=cds-WP_001208070.1;Parent=gene-PHA55_RS18735;Dbxref=Genbank:WP_001208070.1;Name=WP_001208070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001208089.1;locus_tag=PHA55_RS18735;product=MarR family transcriptional regulator;protein_id=WP_001208070.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3837213	3838205	.	-	.	ID=gene-PHA55_RS18740;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=PHA55_RS18740;old_locus_tag=PHA55_18735
NZ_CP116044.1	Protein Homology	CDS	3837213	3838205	.	-	0	ID=cds-WP_000081550.1;Parent=gene-PHA55_RS18740;Dbxref=Genbank:WP_000081550.1;Name=WP_000081550.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=PHA55_RS18740;product=RNA polymerase sigma factor RpoS;protein_id=WP_000081550.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3838268	3839407	.	-	.	ID=gene-PHA55_RS18745;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=PHA55_RS18745;old_locus_tag=PHA55_18740
NZ_CP116044.1	Protein Homology	CDS	3838268	3839407	.	-	0	ID=cds-WP_001272590.1;Parent=gene-PHA55_RS18745;Dbxref=Genbank:WP_001272590.1;Name=WP_001272590.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417222.1;locus_tag=PHA55_RS18745;product=murein hydrolase activator NlpD;protein_id=WP_001272590.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3839547	3840173	.	-	.	ID=gene-PHA55_RS18750;Name=pcm;gbkey=Gene;gene=pcm;gene_biotype=protein_coding;locus_tag=PHA55_RS18750;old_locus_tag=PHA55_18745
NZ_CP116044.1	Protein Homology	CDS	3839547	3840173	.	-	0	ID=cds-WP_000254708.1;Parent=gene-PHA55_RS18750;Dbxref=Genbank:WP_000254708.1;Name=WP_000254708.1;Ontology_term=GO:0030091,GO:0004719;gbkey=CDS;gene=pcm;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=PHA55_RS18750;product=protein-L-isoaspartate O-methyltransferase;protein_id=WP_000254708.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3840167	3840928	.	-	.	ID=gene-PHA55_RS18755;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=PHA55_RS18755;old_locus_tag=PHA55_18750
NZ_CP116044.1	Protein Homology	CDS	3840167	3840928	.	-	0	ID=cds-WP_001472109.1;Parent=gene-PHA55_RS18755;Dbxref=Genbank:WP_001472109.1;Name=WP_001472109.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311625.1;locus_tag=PHA55_RS18755;product=5'/3'-nucleotidase SurE;protein_id=WP_001472109.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3840909	3841958	.	-	.	ID=gene-PHA55_RS18760;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=PHA55_RS18760;old_locus_tag=PHA55_18755
NZ_CP116044.1	Protein Homology	CDS	3840909	3841958	.	-	0	ID=cds-WP_000568943.1;Parent=gene-PHA55_RS18760;Dbxref=Genbank:WP_000568943.1;Name=WP_000568943.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417225.1;locus_tag=PHA55_RS18760;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_000568943.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3841955	3842434	.	-	.	ID=gene-PHA55_RS18765;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=PHA55_RS18765;old_locus_tag=PHA55_18760
NZ_CP116044.1	Protein Homology	CDS	3841955	3842434	.	-	0	ID=cds-WP_001219242.1;Parent=gene-PHA55_RS18765;Dbxref=Genbank:WP_001219242.1;Name=WP_001219242.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311627.1;locus_tag=PHA55_RS18765;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_001219242.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3842434	3843144	.	-	.	ID=gene-PHA55_RS18770;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=PHA55_RS18770;old_locus_tag=PHA55_18765
NZ_CP116044.1	Protein Homology	CDS	3842434	3843144	.	-	0	ID=cds-WP_000246138.1;Parent=gene-PHA55_RS18770;Dbxref=Genbank:WP_000246138.1;Name=WP_000246138.1;Ontology_term=GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417227.1;locus_tag=PHA55_RS18770;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_000246138.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3843163	3843474	.	-	.	ID=gene-PHA55_RS18775;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=PHA55_RS18775;old_locus_tag=PHA55_18770
NZ_CP116044.1	Protein Homology	CDS	3843163	3843474	.	-	0	ID=cds-WP_000517476.1;Parent=gene-PHA55_RS18775;Dbxref=Genbank:WP_000517476.1;Name=WP_000517476.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311629.1;locus_tag=PHA55_RS18775;product=cell division protein FtsB;protein_id=WP_000517476.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3843668	3843991	.	-	.	ID=gene-PHA55_RS18780;Name=ygbE;gbkey=Gene;gene=ygbE;gene_biotype=protein_coding;locus_tag=PHA55_RS18780;old_locus_tag=PHA55_18775
NZ_CP116044.1	Protein Homology	CDS	3843668	3843991	.	-	0	ID=cds-WP_001246104.1;Parent=gene-PHA55_RS18780;Dbxref=Genbank:WP_001246104.1;Name=WP_001246104.1;gbkey=CDS;gene=ygbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417229.1;locus_tag=PHA55_RS18780;product=DUF3561 family protein;protein_id=WP_001246104.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3844041	3844646	.	-	.	ID=gene-PHA55_RS18785;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=PHA55_RS18785;old_locus_tag=PHA55_18780
NZ_CP116044.1	Protein Homology	CDS	3844041	3844646	.	-	0	ID=cds-WP_001173673.1;Parent=gene-PHA55_RS18785;Dbxref=Genbank:WP_001173673.1;Name=WP_001173673.1;Ontology_term=GO:0006790,GO:0004020;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311631.1;locus_tag=PHA55_RS18785;product=adenylyl-sulfate kinase;protein_id=WP_001173673.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3844646	3846073	.	-	.	ID=gene-PHA55_RS18790;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=PHA55_RS18790;old_locus_tag=PHA55_18785
NZ_CP116044.1	Protein Homology	CDS	3844646	3846073	.	-	0	ID=cds-WP_001090346.1;Parent=gene-PHA55_RS18790;Dbxref=Genbank:WP_001090346.1;Name=WP_001090346.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417231.1;locus_tag=PHA55_RS18790;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_001090346.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3846075	3846983	.	-	.	ID=gene-PHA55_RS18795;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=PHA55_RS18795;old_locus_tag=PHA55_18790
NZ_CP116044.1	Protein Homology	CDS	3846075	3846983	.	-	0	ID=cds-WP_000372108.1;Parent=gene-PHA55_RS18795;Dbxref=Genbank:WP_000372108.1;Name=WP_000372108.1;Ontology_term=GO:0019419,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate reduction|0019419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=PHA55_RS18795;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_000372108.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3847235	3848272	.	+	.	ID=gene-PHA55_RS18800;Name=iap;gbkey=Gene;gene=iap;gene_biotype=protein_coding;locus_tag=PHA55_RS18800;old_locus_tag=PHA55_18795
NZ_CP116044.1	Protein Homology	CDS	3847235	3848272	.	+	0	ID=cds-WP_000490402.1;Parent=gene-PHA55_RS18800;Dbxref=Genbank:WP_000490402.1;Name=WP_000490402.1;gbkey=CDS;gene=iap;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311634.1;locus_tag=PHA55_RS18800;product=alkaline phosphatase isozyme conversion aminopeptidase;protein_id=WP_000490402.1;transl_table=11
NZ_CP116044.1	RefSeq	direct_repeat	3848354	3849177	.	+	.	ID=id-NZ_CP116044.1:3848354..3849177;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=3848354..3848382;rpt_unit_seq=cggtttatccccgctggcgcggggaacac
NZ_CP116044.1	RefSeq	gene	3849274	3849498	.	-	.	ID=gene-PHA55_RS18805;Name=cas2e;gbkey=Gene;gene=cas2e;gene_biotype=protein_coding;locus_tag=PHA55_RS18805;old_locus_tag=PHA55_18800
NZ_CP116044.1	Protein Homology	CDS	3849274	3849498	.	-	0	ID=cds-WP_223716397.1;Parent=gene-PHA55_RS18805;Dbxref=Genbank:WP_223716397.1;Name=WP_223716397.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2e;go_function=endoribonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641026.1;locus_tag=PHA55_RS18805;product=type I-E CRISPR-associated endoribonuclease Cas2e;protein_id=WP_223716397.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3849567	3850487	.	-	.	ID=gene-PHA55_RS18810;Name=cas1e;gbkey=Gene;gene=cas1e;gene_biotype=protein_coding;locus_tag=PHA55_RS18810;old_locus_tag=PHA55_18805
NZ_CP116044.1	Protein Homology	CDS	3849567	3850487	.	-	0	ID=cds-WP_000144881.1;Parent=gene-PHA55_RS18810;Dbxref=Genbank:WP_000144881.1;Name=WP_000144881.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1e;go_function=nucleic acid binding|0003676||IEA,endodeoxyribonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461859.1;locus_tag=PHA55_RS18810;product=type I-E CRISPR-associated endonuclease Cas1e;protein_id=WP_000144881.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3850484	3851134	.	-	.	ID=gene-PHA55_RS18815;Name=cas6e;gbkey=Gene;gene=cas6e;gene_biotype=protein_coding;locus_tag=PHA55_RS18815;old_locus_tag=PHA55_18810
NZ_CP116044.1	Protein Homology	CDS	3850484	3851134	.	-	0	ID=cds-WP_001472112.1;Parent=gene-PHA55_RS18815;Dbxref=Genbank:WP_001472112.1;Name=WP_001472112.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=cas6e;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000281458.1;locus_tag=PHA55_RS18815;product=type I-E CRISPR-associated protein Cas6/Cse3/CasE;protein_id=WP_001472112.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3851116	3851862	.	-	.	ID=gene-PHA55_RS18820;Name=cas5e;gbkey=Gene;gene=cas5e;gene_biotype=protein_coding;locus_tag=PHA55_RS18820;old_locus_tag=PHA55_18815
NZ_CP116044.1	Protein Homology	CDS	3851116	3851862	.	-	0	ID=cds-WP_000085060.1;Parent=gene-PHA55_RS18820;Dbxref=Genbank:WP_000085060.1;Name=WP_000085060.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=cas5e;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311638.1;locus_tag=PHA55_RS18820;product=type I-E CRISPR-associated protein Cas5/CasD;protein_id=WP_000085060.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3851873	3852928	.	-	.	ID=gene-PHA55_RS18825;Name=cas7e;gbkey=Gene;gene=cas7e;gene_biotype=protein_coding;locus_tag=PHA55_RS18825;old_locus_tag=PHA55_18820
NZ_CP116044.1	Protein Homology	CDS	3851873	3852928	.	-	0	ID=cds-WP_000206450.1;Parent=gene-PHA55_RS18825;Dbxref=Genbank:WP_000206450.1;Name=WP_000206450.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=cas7e;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311639.1;locus_tag=PHA55_RS18825;product=type I-E CRISPR-associated protein Cas7/Cse4/CasC;protein_id=WP_000206450.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3852940	3853476	.	-	.	ID=gene-PHA55_RS18830;Name=casB;gbkey=Gene;gene=casB;gene_biotype=protein_coding;locus_tag=PHA55_RS18830;old_locus_tag=PHA55_18825
NZ_CP116044.1	Protein Homology	CDS	3852940	3853476	.	-	0	ID=cds-WP_000029329.1;Parent=gene-PHA55_RS18830;Dbxref=Genbank:WP_000029329.1;Name=WP_000029329.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=casB;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311640.1;locus_tag=PHA55_RS18830;product=type I-E CRISPR-associated protein Cse2/CasB;protein_id=WP_000029329.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3853473	3855035	.	-	.	ID=gene-PHA55_RS18835;Name=casA;gbkey=Gene;gene=casA;gene_biotype=protein_coding;locus_tag=PHA55_RS18835;old_locus_tag=PHA55_18830
NZ_CP116044.1	Protein Homology	CDS	3853473	3855035	.	-	0	ID=cds-WP_001084093.1;Parent=gene-PHA55_RS18835;Dbxref=Genbank:WP_001084093.1;Name=WP_001084093.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=casA;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311641.1;locus_tag=PHA55_RS18835;product=type I-E CRISPR-associated protein Cse1/CasA;protein_id=WP_001084093.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3855133	3857832	.	-	.	ID=gene-PHA55_RS18840;Name=PHA55_RS18840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS18840;old_locus_tag=PHA55_18835
NZ_CP116044.1	Protein Homology	CDS	3855133	3857832	.	-	0	ID=cds-WP_042099585.1;Parent=gene-PHA55_RS18840;Dbxref=Genbank:WP_042099585.1;Name=WP_042099585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001233973.1;locus_tag=PHA55_RS18840;product=CRISPR-associated helicase/endonuclease Cas3;protein_id=WP_042099585.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3858027	3858179	.	-	.	ID=gene-PHA55_RS18845;Name=PHA55_RS18845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS18845;old_locus_tag=PHA55_18840
NZ_CP116044.1	Protein Homology	CDS	3858027	3858179	.	-	0	ID=cds-WP_000956458.1;Parent=gene-PHA55_RS18845;Dbxref=Genbank:WP_000956458.1;Name=WP_000956458.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311643.1;locus_tag=PHA55_RS18845;product=Hok/Gef family protein;protein_id=WP_000956458.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3858444	3859178	.	-	.	ID=gene-PHA55_RS18850;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=PHA55_RS18850;old_locus_tag=PHA55_18845
NZ_CP116044.1	Protein Homology	CDS	3858444	3859178	.	-	0	ID=cds-WP_000039843.1;Parent=gene-PHA55_RS18850;Dbxref=Genbank:WP_000039843.1;Name=WP_000039843.1;Ontology_term=GO:0019379,GO:0004604;gbkey=CDS;gene=cysH;go_function=phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708560.2;locus_tag=PHA55_RS18850;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000039843.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3859252	3860964	.	-	.	ID=gene-PHA55_RS18855;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=PHA55_RS18855;old_locus_tag=PHA55_18850
NZ_CP116044.1	Protein Homology	CDS	3859252	3860964	.	-	0	ID=cds-WP_001290688.1;Parent=gene-PHA55_RS18855;Dbxref=Genbank:WP_001290688.1;Name=WP_001290688.1;Ontology_term=GO:0000103,GO:0004783;gbkey=CDS;gene=cysI;go_function=sulfite reductase (NADPH) activity|0004783||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=PHA55_RS18855;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_001290688.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3860964	3862763	.	-	.	ID=gene-PHA55_RS18860;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=PHA55_RS18860;old_locus_tag=PHA55_18855
NZ_CP116044.1	Protein Homology	CDS	3860964	3862763	.	-	0	ID=cds-WP_001402503.1;Parent=gene-PHA55_RS18860;Dbxref=Genbank:WP_001402503.1;Name=WP_001402503.1;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417244.1;locus_tag=PHA55_RS18860;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=WP_001402503.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3863082	3863444	.	+	.	ID=gene-PHA55_RS18865;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=PHA55_RS18865;old_locus_tag=PHA55_18860
NZ_CP116044.1	Protein Homology	CDS	3863082	3863444	.	+	0	ID=cds-WP_000108294.1;Parent=gene-PHA55_RS18865;Dbxref=Genbank:WP_000108294.1;Name=WP_000108294.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708563.2;locus_tag=PHA55_RS18865;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_000108294.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3863522	3864793	.	+	.	ID=gene-PHA55_RS18870;Name=ygcN;gbkey=Gene;gene=ygcN;gene_biotype=protein_coding;locus_tag=PHA55_RS18870;old_locus_tag=PHA55_18865
NZ_CP116044.1	Protein Homology	CDS	3863522	3864793	.	+	0	ID=cds-WP_001349983.1;Parent=gene-PHA55_RS18870;Dbxref=Genbank:WP_001349983.1;Name=WP_001349983.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ygcN;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417246.4;locus_tag=PHA55_RS18870;product=FAD-dependent oxidoreductase;protein_id=WP_001349983.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3864784	3865044	.	+	.	ID=gene-PHA55_RS18875;Name=ygcO;gbkey=Gene;gene=ygcO;gene_biotype=protein_coding;locus_tag=PHA55_RS18875;old_locus_tag=PHA55_18870
NZ_CP116044.1	Protein Homology	CDS	3864784	3865044	.	+	0	ID=cds-WP_000109367.1;Parent=gene-PHA55_RS18875;Dbxref=Genbank:WP_000109367.1;Name=WP_000109367.1;gbkey=CDS;gene=ygcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311649.2;locus_tag=PHA55_RS18875;product=ferredoxin family protein;protein_id=WP_000109367.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3865061	3865636	.	+	.	ID=gene-PHA55_RS18880;Name=ygcP;gbkey=Gene;gene=ygcP;gene_biotype=protein_coding;locus_tag=PHA55_RS18880;old_locus_tag=PHA55_18875
NZ_CP116044.1	Protein Homology	CDS	3865061	3865636	.	+	0	ID=cds-WP_001130266.1;Parent=gene-PHA55_RS18880;Dbxref=Genbank:WP_001130266.1;Name=WP_001130266.1;gbkey=CDS;gene=ygcP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417248.1;locus_tag=PHA55_RS18880;product=glycerol-3-phosphate responsive antiterminator;protein_id=WP_001130266.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3865784	3866644	.	-	.	ID=gene-PHA55_RS18885;Name=ygcQ;gbkey=Gene;gene=ygcQ;gene_biotype=protein_coding;locus_tag=PHA55_RS18885;old_locus_tag=PHA55_18880
NZ_CP116044.1	Protein Homology	CDS	3865784	3866644	.	-	0	ID=cds-WP_001299097.1;Parent=gene-PHA55_RS18885;Dbxref=Genbank:WP_001299097.1;Name=WP_001299097.1;gbkey=CDS;gene=ygcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417249.4;locus_tag=PHA55_RS18885;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_001299097.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3866641	3867420	.	-	.	ID=gene-PHA55_RS18890;Name=ygcR;gbkey=Gene;gene=ygcR;gene_biotype=protein_coding;locus_tag=PHA55_RS18890;old_locus_tag=PHA55_18885
NZ_CP116044.1	Protein Homology	CDS	3866641	3867420	.	-	0	ID=cds-WP_001299652.1;Parent=gene-PHA55_RS18890;Dbxref=Genbank:WP_001299652.1;Name=WP_001299652.1;gbkey=CDS;gene=ygcR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417250.4;locus_tag=PHA55_RS18890;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_001299652.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3867398	3868807	.	-	.	ID=gene-PHA55_RS18895;Name=ygcS;gbkey=Gene;gene=ygcS;gene_biotype=protein_coding;locus_tag=PHA55_RS18895;old_locus_tag=PHA55_18890
NZ_CP116044.1	Protein Homology	CDS	3867398	3868807	.	-	0	ID=cds-WP_000147666.1;Parent=gene-PHA55_RS18895;Dbxref=Genbank:WP_000147666.1;Name=WP_000147666.1;gbkey=CDS;gene=ygcS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708568.1;locus_tag=PHA55_RS18895;product=MFS transporter;protein_id=WP_000147666.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3868829	3870283	.	-	.	ID=gene-PHA55_RS18900;Name=ygcU;gbkey=Gene;gene=ygcU;gene_biotype=protein_coding;locus_tag=PHA55_RS18900;old_locus_tag=PHA55_18895
NZ_CP116044.1	Protein Homology	CDS	3868829	3870283	.	-	0	ID=cds-WP_000059312.1;Parent=gene-PHA55_RS18900;Dbxref=Genbank:WP_000059312.1;Name=WP_000059312.1;gbkey=CDS;gene=ygcU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311656.1;locus_tag=PHA55_RS18900;product=FAD-binding oxidoreductase;protein_id=WP_000059312.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3870353	3871138	.	-	.	ID=gene-PHA55_RS18905;Name=ygcW;gbkey=Gene;gene=ygcW;gene_biotype=protein_coding;locus_tag=PHA55_RS18905;old_locus_tag=PHA55_18900
NZ_CP116044.1	Protein Homology	CDS	3870353	3871138	.	-	0	ID=cds-WP_000021321.1;Parent=gene-PHA55_RS18905;Dbxref=Genbank:WP_000021321.1;Name=WP_000021321.1;gbkey=CDS;gene=ygcW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417254.4;locus_tag=PHA55_RS18905;product=SDR family oxidoreductase;protein_id=WP_000021321.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3871457	3872734	.	+	.	ID=gene-PHA55_RS18910;Name=yqcE;gbkey=Gene;gene=yqcE;gene_biotype=protein_coding;locus_tag=PHA55_RS18910;old_locus_tag=PHA55_18905
NZ_CP116044.1	Protein Homology	CDS	3871457	3872734	.	+	0	ID=cds-WP_001164557.1;Parent=gene-PHA55_RS18910;Dbxref=Genbank:WP_001164557.1;Name=WP_001164557.1;gbkey=CDS;gene=yqcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311658.1;locus_tag=PHA55_RS18910;product=MFS transporter;protein_id=WP_001164557.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3872761	3874239	.	+	.	ID=gene-PHA55_RS18915;Name=ygcE;gbkey=Gene;gene=ygcE;gene_biotype=protein_coding;locus_tag=PHA55_RS18915;old_locus_tag=PHA55_18910
NZ_CP116044.1	Protein Homology	CDS	3872761	3874239	.	+	0	ID=cds-WP_000039681.1;Parent=gene-PHA55_RS18915;Dbxref=Genbank:WP_000039681.1;Name=WP_000039681.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;gene=ygcE;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417256.1;locus_tag=PHA55_RS18915;product=FGGY-family carbohydrate kinase;protein_id=WP_000039681.1;transl_table=11
NZ_CP116044.1	RefSeq	direct_repeat	3874877	3875150	.	+	.	ID=id-NZ_CP116044.1:3874877..3875150;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=3874940..3874968;rpt_unit_seq=cggtttatccccgctggcgcggggaactc
NZ_CP116044.1	RefSeq	gene	3875490	3876161	.	-	.	ID=gene-PHA55_RS18920;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=PHA55_RS18920;old_locus_tag=PHA55_18915
NZ_CP116044.1	Protein Homology	CDS	3875490	3876161	.	-	0	ID=cds-WP_001199973.1;Parent=gene-PHA55_RS18920;Dbxref=Genbank:WP_001199973.1;Name=WP_001199973.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=PHA55_RS18920;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_001199973.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3876300	3876440	.	+	.	ID=gene-PHA55_RS18925;Name=yqcG;gbkey=Gene;gene=yqcG;gene_biotype=protein_coding;locus_tag=PHA55_RS18925;old_locus_tag=PHA55_18920
NZ_CP116044.1	Protein Homology	CDS	3876300	3876440	.	+	0	ID=cds-WP_001288227.1;Parent=gene-PHA55_RS18925;Dbxref=Genbank:WP_001288227.1;Name=WP_001288227.1;gbkey=CDS;gene=yqcG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791252.1;locus_tag=PHA55_RS18925;product=cell envelope stress response protein YqcG;protein_id=WP_001288227.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3876454	3877326	.	+	.	ID=gene-PHA55_RS18930;Name=ygcG;gbkey=Gene;gene=ygcG;gene_biotype=protein_coding;locus_tag=PHA55_RS18930;old_locus_tag=PHA55_18925
NZ_CP116044.1	Protein Homology	CDS	3876454	3877326	.	+	0	ID=cds-WP_032197157.1;Parent=gene-PHA55_RS18930;Dbxref=Genbank:WP_032197157.1;Name=WP_032197157.1;gbkey=CDS;gene=ygcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417258.4;locus_tag=PHA55_RS18930;product=YgcG family protein;protein_id=WP_032197157.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3877386	3878684	.	-	.	ID=gene-PHA55_RS18935;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=PHA55_RS18935;old_locus_tag=PHA55_18930
NZ_CP116044.1	Protein Homology	CDS	3877386	3878684	.	-	0	ID=cds-WP_000036723.1;Parent=gene-PHA55_RS18935;Dbxref=Genbank:WP_000036723.1;Name=WP_000036723.1;Ontology_term=GO:0006096,GO:0004634;gbkey=CDS;gene=eno;go_function=phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311666.1;locus_tag=PHA55_RS18935;product=phosphopyruvate hydratase;protein_id=WP_000036723.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3878772	3880409	.	-	.	ID=gene-PHA55_RS18940;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=PHA55_RS18940;old_locus_tag=PHA55_18935
NZ_CP116044.1	Protein Homology	CDS	3878772	3880409	.	-	0	ID=cds-WP_000210878.1;Parent=gene-PHA55_RS18940;Dbxref=Genbank:WP_000210878.1;Name=WP_000210878.1;Ontology_term=GO:0009220,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=PHA55_RS18940;product=CTP synthase (glutamine hydrolyzing);protein_id=WP_000210878.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3880637	3881428	.	-	.	ID=gene-PHA55_RS18945;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=PHA55_RS18945;old_locus_tag=PHA55_18940
NZ_CP116044.1	Protein Homology	CDS	3880637	3881428	.	-	0	ID=cds-WP_001071648.1;Parent=gene-PHA55_RS18945;Dbxref=Genbank:WP_001071648.1;Name=WP_001071648.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311668.1;locus_tag=PHA55_RS18945;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_001071648.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3881499	3881834	.	-	.	ID=gene-PHA55_RS18950;Name=mazF;gbkey=Gene;gene=mazF;gene_biotype=protein_coding;locus_tag=PHA55_RS18950;old_locus_tag=PHA55_18945
NZ_CP116044.1	Protein Homology	CDS	3881499	3881834	.	-	0	ID=cds-WP_000254745.1;Parent=gene-PHA55_RS18950;Dbxref=Genbank:WP_000254745.1;Name=WP_000254745.1;gbkey=CDS;gene=mazF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311669.1;locus_tag=PHA55_RS18950;product=endoribonuclease MazF;protein_id=WP_000254745.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3881834	3882082	.	-	.	ID=gene-PHA55_RS18955;Name=mazE;gbkey=Gene;gene=mazE;gene_biotype=protein_coding;locus_tag=PHA55_RS18955;old_locus_tag=PHA55_18950
NZ_CP116044.1	Protein Homology	CDS	3881834	3882082	.	-	0	ID=cds-WP_000581937.1;Parent=gene-PHA55_RS18955;Dbxref=Genbank:WP_000581937.1;Name=WP_000581937.1;gbkey=CDS;gene=mazE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311670.1;locus_tag=PHA55_RS18955;product=type II toxin-antitoxin system antitoxin MazE;protein_id=WP_000581937.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3882160	3884394	.	-	.	ID=gene-PHA55_RS18960;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=PHA55_RS18960;old_locus_tag=PHA55_18955
NZ_CP116044.1	Protein Homology	CDS	3882160	3884394	.	-	0	ID=cds-WP_000226815.1;Parent=gene-PHA55_RS18960;Dbxref=Genbank:WP_000226815.1;Name=WP_000226815.1;gbkey=CDS;gene=relA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311671.1;locus_tag=PHA55_RS18960;product=GTP pyrophosphokinase;protein_id=WP_000226815.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3884442	3885743	.	-	.	ID=gene-PHA55_RS18965;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=PHA55_RS18965;old_locus_tag=PHA55_18960
NZ_CP116044.1	Protein Homology	CDS	3884442	3885743	.	-	0	ID=cds-WP_000046785.1;Parent=gene-PHA55_RS18965;Dbxref=Genbank:WP_000046785.1;Name=WP_000046785.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417265.1;locus_tag=PHA55_RS18965;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_000046785.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3885800	3888556	.	+	.	ID=gene-PHA55_RS18970;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=PHA55_RS18970;old_locus_tag=PHA55_18965
NZ_CP116044.1	Protein Homology	CDS	3885800	3888556	.	+	0	ID=cds-WP_000186450.1;Parent=gene-PHA55_RS18970;Dbxref=Genbank:WP_000186450.1;Name=WP_000186450.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=barA;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311673.1;locus_tag=PHA55_RS18970;product=two-component sensor histidine kinase BarA;protein_id=WP_000186450.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3888788	3890128	.	-	.	ID=gene-PHA55_RS18975;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=PHA55_RS18975;old_locus_tag=PHA55_18970
NZ_CP116044.1	Protein Homology	CDS	3888788	3890128	.	-	0	ID=cds-WP_000098237.1;Parent=gene-PHA55_RS18975;Dbxref=Genbank:WP_000098237.1;Name=WP_000098237.1;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311674.1;locus_tag=PHA55_RS18975;product=glucarate dehydratase;protein_id=WP_000098237.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3890149	3891489	.	-	.	ID=gene-PHA55_RS18980;Name=gudX;gbkey=Gene;gene=gudX;gene_biotype=protein_coding;locus_tag=PHA55_RS18980;old_locus_tag=PHA55_18975
NZ_CP116044.1	Protein Homology	CDS	3890149	3891489	.	-	0	ID=cds-WP_000211815.1;Parent=gene-PHA55_RS18980;Dbxref=Genbank:WP_000211815.1;Name=WP_000211815.1;gbkey=CDS;gene=gudX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708582.2;locus_tag=PHA55_RS18980;product=enolase C-terminal domain-like protein;protein_id=WP_000211815.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3891491	3892843	.	-	.	ID=gene-PHA55_RS18985;Name=gudP;gbkey=Gene;gene=gudP;gene_biotype=protein_coding;locus_tag=PHA55_RS18985;old_locus_tag=PHA55_18980
NZ_CP116044.1	Protein Homology	CDS	3891491	3892843	.	-	0	ID=cds-WP_000097082.1;Parent=gene-PHA55_RS18985;Dbxref=Genbank:WP_000097082.1;Name=WP_000097082.1;gbkey=CDS;gene=gudP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417269.1;locus_tag=PHA55_RS18985;product=galactarate/glucarate/glycerate transporter GudP;protein_id=WP_000097082.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3893278	3893727	.	-	.	ID=gene-PHA55_RS18990;Name=yqcA;gbkey=Gene;gene=yqcA;gene_biotype=protein_coding;locus_tag=PHA55_RS18990;old_locus_tag=PHA55_18985
NZ_CP116044.1	Protein Homology	CDS	3893278	3893727	.	-	0	ID=cds-WP_000807753.1;Parent=gene-PHA55_RS18990;Dbxref=Genbank:WP_000807753.1;Name=WP_000807753.1;Ontology_term=GO:0010181;gbkey=CDS;gene=yqcA;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311677.1;locus_tag=PHA55_RS18990;product=flavodoxin;protein_id=WP_000807753.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3893745	3894527	.	-	.	ID=gene-PHA55_RS18995;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=PHA55_RS18995;old_locus_tag=PHA55_18990
NZ_CP116044.1	Protein Homology	CDS	3893745	3894527	.	-	0	ID=cds-WP_000890008.1;Parent=gene-PHA55_RS18995;Dbxref=Genbank:WP_000890008.1;Name=WP_000890008.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417271.1;locus_tag=PHA55_RS18995;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_000890008.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3894527	3894856	.	-	.	ID=gene-PHA55_RS19000;Name=yqcC;gbkey=Gene;gene=yqcC;gene_biotype=protein_coding;locus_tag=PHA55_RS19000;old_locus_tag=PHA55_18995
NZ_CP116044.1	Protein Homology	CDS	3894527	3894856	.	-	0	ID=cds-WP_000206990.1;Parent=gene-PHA55_RS19000;Dbxref=Genbank:WP_000206990.1;Name=WP_000206990.1;gbkey=CDS;gene=yqcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417272.1;locus_tag=PHA55_RS19000;product=YqcC family protein;protein_id=WP_000206990.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3895478	3896023	.	-	.	ID=gene-PHA55_RS19005;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=PHA55_RS19005;old_locus_tag=PHA55_19000
NZ_CP116044.1	Protein Homology	CDS	3895478	3896023	.	-	0	ID=cds-WP_000342431.1;Parent=gene-PHA55_RS19005;Dbxref=Genbank:WP_000342431.1;Name=WP_000342431.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417273.1;locus_tag=PHA55_RS19005;product=SecY-interacting protein;protein_id=WP_000342431.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3896091	3896939	.	+	.	ID=gene-PHA55_RS19010;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=PHA55_RS19010;old_locus_tag=PHA55_19005
NZ_CP116044.1	Protein Homology	CDS	3896091	3896939	.	+	0	ID=cds-WP_000100430.1;Parent=gene-PHA55_RS19010;Dbxref=Genbank:WP_000100430.1;Name=WP_000100430.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708588.1;locus_tag=PHA55_RS19010;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_000100430.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3897051	3898415	.	+	.	ID=gene-PHA55_RS19015;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=PHA55_RS19015;old_locus_tag=PHA55_19010
NZ_CP116044.1	Protein Homology	CDS	3897051	3898415	.	+	0	ID=cds-WP_000627995.1;Parent=gene-PHA55_RS19015;Dbxref=Genbank:WP_000627995.1;Name=WP_000627995.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311682.1;locus_tag=PHA55_RS19015;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_000627995.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3898972	3900261	.	+	.	ID=gene-PHA55_RS19020;Name=sdaC;gbkey=Gene;gene=sdaC;gene_biotype=protein_coding;locus_tag=PHA55_RS19020;old_locus_tag=PHA55_19015
NZ_CP116044.1	Protein Homology	CDS	3898972	3900261	.	+	0	ID=cds-WP_000450476.1;Parent=gene-PHA55_RS19020;Dbxref=Genbank:WP_000450476.1;Name=WP_000450476.1;gbkey=CDS;gene=sdaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311683.1;locus_tag=PHA55_RS19020;product=HAAAP family serine/threonine permease SdaC;protein_id=WP_000450476.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3900319	3901686	.	+	.	ID=gene-PHA55_RS19025;Name=sdaB;gbkey=Gene;gene=sdaB;gene_biotype=protein_coding;locus_tag=PHA55_RS19025;old_locus_tag=PHA55_19020
NZ_CP116044.1	Protein Homology	CDS	3900319	3901686	.	+	0	ID=cds-WP_000626410.1;Parent=gene-PHA55_RS19025;Dbxref=Genbank:WP_000626410.1;Name=WP_000626410.1;gbkey=CDS;gene=sdaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708592.1;locus_tag=PHA55_RS19025;product=L-serine ammonia-lyase II;protein_id=WP_000626410.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3901798	3902553	.	+	.	ID=gene-PHA55_RS19030;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=PHA55_RS19030;old_locus_tag=PHA55_19025
NZ_CP116044.1	Protein Homology	CDS	3901798	3902553	.	+	0	ID=cds-WP_000268232.1;Parent=gene-PHA55_RS19030;Dbxref=Genbank:WP_000268232.1;Name=WP_000268232.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417278.4;locus_tag=PHA55_RS19030;product=flap endonuclease Xni;protein_id=WP_000268232.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3902608	3903756	.	-	.	ID=gene-PHA55_RS19035;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=PHA55_RS19035;old_locus_tag=PHA55_19030
NZ_CP116044.1	Protein Homology	CDS	3902608	3903756	.	-	0	ID=cds-WP_000013589.1;Parent=gene-PHA55_RS19035;Dbxref=Genbank:WP_000013589.1;Name=WP_000013589.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fucO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417279.2;locus_tag=PHA55_RS19035;product=lactaldehyde reductase;protein_id=WP_000013589.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3903784	3904431	.	-	.	ID=gene-PHA55_RS19040;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=PHA55_RS19040;old_locus_tag=PHA55_19035
NZ_CP116044.1	Protein Homology	CDS	3903784	3904431	.	-	0	ID=cds-WP_000440782.1;Parent=gene-PHA55_RS19040;Dbxref=Genbank:WP_000440782.1;Name=WP_000440782.1;Ontology_term=GO:0042355;gbkey=CDS;gene=fucA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417280.1;locus_tag=PHA55_RS19040;product=L-fuculose-phosphate aldolase;protein_id=WP_000440782.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3904978	3906294	.	+	.	ID=gene-PHA55_RS19045;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=PHA55_RS19045;old_locus_tag=PHA55_19040
NZ_CP116044.1	Protein Homology	CDS	3904978	3906294	.	+	0	ID=cds-WP_000528603.1;Parent=gene-PHA55_RS19045;Dbxref=Genbank:WP_000528603.1;Name=WP_000528603.1;Ontology_term=GO:0015756,GO:0015150;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417281.1;locus_tag=PHA55_RS19045;product=L-fucose:H+ symporter permease;protein_id=WP_000528603.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3906327	3908102	.	+	.	ID=gene-PHA55_RS19050;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=PHA55_RS19050;old_locus_tag=PHA55_19045
NZ_CP116044.1	Protein Homology	CDS	3906327	3908102	.	+	0	ID=cds-WP_000724150.1;Parent=gene-PHA55_RS19050;Dbxref=Genbank:WP_000724150.1;Name=WP_000724150.1;Ontology_term=GO:0006005,GO:0008736;gbkey=CDS;gene=fucI;go_function=L-fucose isomerase activity|0008736||IEA;go_process=L-fucose biosynthetic process|0006005||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417282.1;locus_tag=PHA55_RS19050;product=L-fucose isomerase;protein_id=WP_000724150.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3908211	3909629	.	+	.	ID=gene-PHA55_RS19055;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=PHA55_RS19055;old_locus_tag=PHA55_19050
NZ_CP116044.1	Protein Homology	CDS	3908211	3909629	.	+	0	ID=cds-WP_000808376.1;Parent=gene-PHA55_RS19055;Dbxref=Genbank:WP_000808376.1;Name=WP_000808376.1;Ontology_term=GO:0042355,GO:0008737;gbkey=CDS;gene=fucK;go_function=L-fuculokinase activity|0008737||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417283.2;locus_tag=PHA55_RS19055;product=L-fuculokinase;protein_id=WP_000808376.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3909631	3910053	.	+	.	ID=gene-PHA55_RS19060;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=PHA55_RS19060;old_locus_tag=PHA55_19055
NZ_CP116044.1	Protein Homology	CDS	3909631	3910053	.	+	0	ID=cds-WP_000920840.1;Parent=gene-PHA55_RS19060;Dbxref=Genbank:WP_000920840.1;Name=WP_000920840.1;Ontology_term=GO:0042354,GO:0016854,GO:0042806;gbkey=CDS;gene=fucU;go_function=racemase and epimerase activity|0016854||IEA,fucose binding|0042806||IEA;go_process=L-fucose metabolic process|0042354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311691.1;locus_tag=PHA55_RS19060;product=L-fucose mutarotase;protein_id=WP_000920840.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3910111	3910842	.	+	.	ID=gene-PHA55_RS19065;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=PHA55_RS19065;old_locus_tag=PHA55_19060
NZ_CP116044.1	Protein Homology	CDS	3910111	3910842	.	+	0	ID=cds-WP_000642344.1;Parent=gene-PHA55_RS19065;Dbxref=Genbank:WP_000642344.1;Name=WP_000642344.1;gbkey=CDS;gene=fucR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417285.1;locus_tag=PHA55_RS19065;product=L-fucose operon activator;protein_id=WP_000642344.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3910886	3911986	.	-	.	ID=gene-PHA55_RS19070;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=PHA55_RS19070;old_locus_tag=PHA55_19065
NZ_CP116044.1	Protein Homology	CDS	3910886	3911986	.	-	0	ID=cds-WP_001045520.1;Parent=gene-PHA55_RS19070;Dbxref=Genbank:WP_001045520.1;Name=WP_001045520.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435097.1;locus_tag=PHA55_RS19070;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_001045520.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3911979	3912374	.	-	.	ID=gene-PHA55_RS19075;Name=ygdD;gbkey=Gene;gene=ygdD;gene_biotype=protein_coding;locus_tag=PHA55_RS19075;old_locus_tag=PHA55_19070
NZ_CP116044.1	Protein Homology	CDS	3911979	3912374	.	-	0	ID=cds-WP_000203905.1;Parent=gene-PHA55_RS19075;Dbxref=Genbank:WP_000203905.1;Name=WP_000203905.1;gbkey=CDS;gene=ygdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311694.1;locus_tag=PHA55_RS19075;product=DUF423 domain-containing protein;protein_id=WP_000203905.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3912393	3913310	.	-	.	ID=gene-PHA55_RS19080;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=PHA55_RS19080;old_locus_tag=PHA55_19075
NZ_CP116044.1	Protein Homology	CDS	3912393	3913310	.	-	0	ID=cds-WP_000044401.1;Parent=gene-PHA55_RS19080;Dbxref=Genbank:WP_000044401.1;Name=WP_000044401.1;gbkey=CDS;gene=gcvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=PHA55_RS19080;product=glycine cleavage system transcriptional regulator GcvA;protein_id=WP_000044401.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3913661	3913888	.	-	.	ID=gene-PHA55_RS19085;Name=ygdI;gbkey=Gene;gene=ygdI;gene_biotype=protein_coding;locus_tag=PHA55_RS19085;old_locus_tag=PHA55_19080
NZ_CP116044.1	Protein Homology	CDS	3913661	3913888	.	-	0	ID=cds-WP_000750398.1;Parent=gene-PHA55_RS19085;Dbxref=Genbank:WP_000750398.1;Name=WP_000750398.1;gbkey=CDS;gene=ygdI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417289.2;locus_tag=PHA55_RS19085;product=YgdI/YgdR family lipoprotein;protein_id=WP_000750398.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3914080	3915285	.	+	.	ID=gene-PHA55_RS19090;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=PHA55_RS19090;old_locus_tag=PHA55_19085
NZ_CP116044.1	Protein Homology	CDS	3914080	3915285	.	+	0	ID=cds-WP_001307370.1;Parent=gene-PHA55_RS19090;Dbxref=Genbank:WP_001307370.1;Name=WP_001307370.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;gene=csdA;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417290.1;locus_tag=PHA55_RS19090;product=cysteine desulfurase CsdA;protein_id=WP_001307370.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3915285	3915728	.	+	.	ID=gene-PHA55_RS19095;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=PHA55_RS19095;old_locus_tag=PHA55_19090
NZ_CP116044.1	Protein Homology	CDS	3915285	3915728	.	+	0	ID=cds-WP_000184251.1;Parent=gene-PHA55_RS19095;Dbxref=Genbank:WP_000184251.1;Name=WP_000184251.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311698.1;locus_tag=PHA55_RS19095;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WP_000184251.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3915779	3916585	.	-	.	ID=gene-PHA55_RS19100;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=PHA55_RS19100;old_locus_tag=PHA55_19095
NZ_CP116044.1	Protein Homology	CDS	3915779	3916585	.	-	0	ID=cds-WP_000117728.1;Parent=gene-PHA55_RS19100;Dbxref=Genbank:WP_000117728.1;Name=WP_000117728.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417292.1;locus_tag=PHA55_RS19100;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_000117728.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3916662	3917759	.	-	.	ID=gene-PHA55_RS19105;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=PHA55_RS19105;old_locus_tag=PHA55_19100
NZ_CP116044.1	Protein Homology	CDS	3916662	3917759	.	-	0	ID=cds-WP_000678646.1;Parent=gene-PHA55_RS19105;Dbxref=Genbank:WP_000678646.1;Name=WP_000678646.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=PHA55_RS19105;product=murein transglycosylase A;protein_id=WP_000678646.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3917968	3918044	.	+	.	ID=gene-PHA55_RS19110;Name=PHA55_RS19110;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS19110;old_locus_tag=PHA55_19105
NZ_CP116044.1	tRNAscan-SE	tRNA	3917968	3918044	.	+	.	ID=rna-PHA55_RS19110;Parent=gene-PHA55_RS19110;anticodon=(pos:3918002..3918004);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS19110;product=tRNA-Met
NZ_CP116044.1	tRNAscan-SE	exon	3917968	3918044	.	+	.	ID=exon-PHA55_RS19110-1;Parent=rna-PHA55_RS19110;anticodon=(pos:3918002..3918004);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS19110;product=tRNA-Met
NZ_CP116044.1	RefSeq	gene	3918078	3918154	.	+	.	ID=gene-PHA55_RS19115;Name=PHA55_RS19115;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS19115;old_locus_tag=PHA55_19110
NZ_CP116044.1	tRNAscan-SE	tRNA	3918078	3918154	.	+	.	ID=rna-PHA55_RS19115;Parent=gene-PHA55_RS19115;anticodon=(pos:3918112..3918114);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS19115;product=tRNA-Met
NZ_CP116044.1	tRNAscan-SE	exon	3918078	3918154	.	+	.	ID=exon-PHA55_RS19115-1;Parent=rna-PHA55_RS19115;anticodon=(pos:3918112..3918114);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS19115;product=tRNA-Met
NZ_CP116044.1	RefSeq	gene	3918188	3918264	.	+	.	ID=gene-PHA55_RS19120;Name=PHA55_RS19120;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS19120;old_locus_tag=PHA55_19115
NZ_CP116044.1	tRNAscan-SE	tRNA	3918188	3918264	.	+	.	ID=rna-PHA55_RS19120;Parent=gene-PHA55_RS19120;anticodon=(pos:3918222..3918224);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS19120;product=tRNA-Met
NZ_CP116044.1	tRNAscan-SE	exon	3918188	3918264	.	+	.	ID=exon-PHA55_RS19120-1;Parent=rna-PHA55_RS19120;anticodon=(pos:3918222..3918224);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS19120;product=tRNA-Met
NZ_CP116044.1	RefSeq	gene	3918339	3919592	.	-	.	ID=gene-PHA55_RS19125;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=PHA55_RS19125;old_locus_tag=PHA55_19120
NZ_CP116044.1	Protein Homology	CDS	3918339	3919592	.	-	0	ID=cds-WP_000016907.1;Parent=gene-PHA55_RS19125;Dbxref=Genbank:WP_000016907.1;Name=WP_000016907.1;Note=Like AmiA%2C dependent on TAT (Twin-Arginine Translocation) system for export.;gbkey=CDS;gene=amiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311701.2;locus_tag=PHA55_RS19125;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WP_000016907.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3919824	3921155	.	+	.	ID=gene-PHA55_RS19130;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=PHA55_RS19130;old_locus_tag=PHA55_19125
NZ_CP116044.1	Protein Homology	CDS	3919824	3921155	.	+	0	ID=cds-WP_000237947.1;Parent=gene-PHA55_RS19130;Dbxref=Genbank:WP_000237947.1;Name=WP_000237947.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=acetyl-CoA:L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311702.1;locus_tag=PHA55_RS19130;product=amino-acid N-acetyltransferase;protein_id=WP_000237947.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3921217	3923043	.	-	.	ID=gene-PHA55_RS19135;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=PHA55_RS19135;old_locus_tag=PHA55_19130
NZ_CP116044.1	Protein Homology	CDS	3921217	3923043	.	-	0	ID=cds-WP_000775955.1;Parent=gene-PHA55_RS19135;Dbxref=Genbank:WP_000775955.1;Name=WP_000775955.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417296.1;locus_tag=PHA55_RS19135;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_000775955.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3923043	3926585	.	-	.	ID=gene-PHA55_RS19140;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=PHA55_RS19140;old_locus_tag=PHA55_19135
NZ_CP116044.1	Protein Homology	CDS	3923043	3926585	.	-	0	ID=cds-WP_053266777.1;Parent=gene-PHA55_RS19140;Dbxref=Genbank:WP_053266777.1;Name=WP_053266777.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417297.1;locus_tag=PHA55_RS19140;product=exodeoxyribonuclease V subunit beta;protein_id=WP_053266777.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3926578	3929466	.	-	.	ID=gene-PHA55_RS19145;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=PHA55_RS19145;old_locus_tag=PHA55_19140
NZ_CP116044.1	Protein Homology	CDS	3926578	3929466	.	-	0	ID=cds-WP_001138213.1;Parent=gene-PHA55_RS19145;Dbxref=Genbank:WP_001138213.1;Name=WP_001138213.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311705.1;locus_tag=PHA55_RS19145;product=pitrilysin;protein_id=WP_001138213.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3929642	3933010	.	-	.	ID=gene-PHA55_RS19150;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=PHA55_RS19150;old_locus_tag=PHA55_19145
NZ_CP116044.1	Protein Homology	CDS	3929642	3933010	.	-	0	ID=cds-WP_021557155.1;Parent=gene-PHA55_RS19150;Dbxref=Genbank:WP_021557155.1;Name=WP_021557155.1;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417299.1;locus_tag=PHA55_RS19150;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_021557155.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3933023	3933346	.	-	.	ID=gene-PHA55_RS19155;Name=ppdC;gbkey=Gene;gene=ppdC;gene_biotype=protein_coding;locus_tag=PHA55_RS19155;old_locus_tag=PHA55_19150
NZ_CP116044.1	Protein Homology	CDS	3933023	3933346	.	-	0	ID=cds-WP_001276460.1;Parent=gene-PHA55_RS19155;Dbxref=Genbank:WP_001276460.1;Name=WP_001276460.1;gbkey=CDS;gene=ppdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417300.1;locus_tag=PHA55_RS19155;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_001276460.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3933331	3933738	.	-	.	ID=gene-PHA55_RS19160;Name=ygdB;gbkey=Gene;gene=ygdB;gene_biotype=protein_coding;locus_tag=PHA55_RS19160;old_locus_tag=PHA55_19155
NZ_CP116044.1	Protein Homology	CDS	3933331	3933738	.	-	0	ID=cds-WP_021557156.1;Parent=gene-PHA55_RS19160;Dbxref=Genbank:WP_021557156.1;Name=WP_021557156.1;gbkey=CDS;gene=ygdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417301.4;locus_tag=PHA55_RS19160;product=DUF2509 family protein;protein_id=WP_021557156.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3933735	3934298	.	-	.	ID=gene-PHA55_RS19165;Name=ppdB;gbkey=Gene;gene=ppdB;gene_biotype=protein_coding;locus_tag=PHA55_RS19165;old_locus_tag=PHA55_19160
NZ_CP116044.1	Protein Homology	CDS	3933735	3934298	.	-	0	ID=cds-WP_001144322.1;Parent=gene-PHA55_RS19165;Dbxref=Genbank:WP_001144322.1;Name=WP_001144322.1;gbkey=CDS;gene=ppdB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439276.1;locus_tag=PHA55_RS19165;product=prepilin peptidase-dependent protein;protein_id=WP_001144322.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3934289	3934759	.	-	.	ID=gene-PHA55_RS19170;Name=ppdA;gbkey=Gene;gene=ppdA;gene_biotype=protein_coding;locus_tag=PHA55_RS19170;old_locus_tag=PHA55_19165
NZ_CP116044.1	Protein Homology	CDS	3934289	3934759	.	-	0	ID=cds-WP_000857051.1;Parent=gene-PHA55_RS19170;Dbxref=Genbank:WP_000857051.1;Name=WP_000857051.1;gbkey=CDS;gene=ppdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417303.1;locus_tag=PHA55_RS19170;product=prepilin peptidase-dependent protein;protein_id=WP_000857051.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3934944	3935738	.	-	.	ID=gene-PHA55_RS19175;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=PHA55_RS19175;old_locus_tag=PHA55_19170
NZ_CP116044.1	Protein Homology	CDS	3934944	3935738	.	-	0	ID=cds-WP_000816232.1;Parent=gene-PHA55_RS19175;Dbxref=Genbank:WP_000816232.1;Name=WP_000816232.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=PHA55_RS19175;product=thymidylate synthase;protein_id=WP_000816232.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3935745	3936620	.	-	.	ID=gene-PHA55_RS19180;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=PHA55_RS19180;old_locus_tag=PHA55_19175
NZ_CP116044.1	Protein Homology	CDS	3935745	3936620	.	-	0	ID=cds-WP_000204658.1;Parent=gene-PHA55_RS19180;Dbxref=Genbank:WP_000204658.1;Name=WP_000204658.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311712.1;locus_tag=PHA55_RS19180;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_000204658.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3936771	3939017	.	-	.	ID=gene-PHA55_RS19185;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=PHA55_RS19185;old_locus_tag=PHA55_19180
NZ_CP116044.1	Protein Homology	CDS	3936771	3939017	.	-	0	ID=cds-WP_000957914.1;Parent=gene-PHA55_RS19185;Dbxref=Genbank:WP_000957914.1;Name=WP_000957914.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311713.1;locus_tag=PHA55_RS19185;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_000957914.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3939030	3939560	.	-	.	ID=gene-PHA55_RS19190;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=PHA55_RS19190;old_locus_tag=PHA55_19185
NZ_CP116044.1	Protein Homology	CDS	3939030	3939560	.	-	0	ID=cds-WP_000564489.1;Parent=gene-PHA55_RS19190;Dbxref=Genbank:WP_000564489.1;Name=WP_000564489.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001655775.1;locus_tag=PHA55_RS19190;product=RNA pyrophosphohydrolase;protein_id=WP_000564489.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3939913	3940059	.	-	.	ID=gene-PHA55_RS19195;Name=ygdT;gbkey=Gene;gene=ygdT;gene_biotype=protein_coding;locus_tag=PHA55_RS19195;old_locus_tag=PHA55_19190
NZ_CP116044.1	Protein Homology	CDS	3939913	3940059	.	-	0	ID=cds-WP_000953278.1;Parent=gene-PHA55_RS19195;Dbxref=Genbank:WP_000953278.1;Name=WP_000953278.1;gbkey=CDS;gene=ygdT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502650.1;locus_tag=PHA55_RS19195;product=protein YgdT;protein_id=WP_000953278.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3940245	3940934	.	+	.	ID=gene-PHA55_RS19200;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=PHA55_RS19200;old_locus_tag=PHA55_19195
NZ_CP116044.1	Protein Homology	CDS	3940245	3940934	.	+	0	ID=cds-WP_000082188.1;Parent=gene-PHA55_RS19200;Dbxref=Genbank:WP_000082188.1;Name=WP_000082188.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311715.1;locus_tag=PHA55_RS19200;product=DNA mismatch repair endonuclease MutH;protein_id=WP_000082188.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3941003	3941716	.	+	.	ID=gene-PHA55_RS19205;Name=ygdQ;gbkey=Gene;gene=ygdQ;gene_biotype=protein_coding;locus_tag=PHA55_RS19205;old_locus_tag=PHA55_19200
NZ_CP116044.1	Protein Homology	CDS	3941003	3941716	.	+	0	ID=cds-WP_000895624.1;Parent=gene-PHA55_RS19205;Dbxref=Genbank:WP_000895624.1;Name=WP_000895624.1;gbkey=CDS;gene=ygdQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311716.1;locus_tag=PHA55_RS19205;product=TerC family protein;protein_id=WP_000895624.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3941854	3942072	.	+	.	ID=gene-PHA55_RS19210;Name=ygdR;gbkey=Gene;gene=ygdR;gene_biotype=protein_coding;locus_tag=PHA55_RS19210;old_locus_tag=PHA55_19205
NZ_CP116044.1	Protein Homology	CDS	3941854	3942072	.	+	0	ID=cds-WP_000758655.1;Parent=gene-PHA55_RS19210;Dbxref=Genbank:WP_000758655.1;Name=WP_000758655.1;gbkey=CDS;gene=ygdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311717.1;locus_tag=PHA55_RS19210;product=lipoprotein YgdR;protein_id=WP_000758655.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3942180	3943220	.	+	.	ID=gene-PHA55_RS19215;Name=tas;gbkey=Gene;gene=tas;gene_biotype=protein_coding;locus_tag=PHA55_RS19215;old_locus_tag=PHA55_19210
NZ_CP116044.1	Protein Homology	CDS	3942180	3943220	.	+	0	ID=cds-WP_001199295.1;Parent=gene-PHA55_RS19215;Dbxref=Genbank:WP_001199295.1;Name=WP_001199295.1;Ontology_term=GO:0047834;gbkey=CDS;gene=tas;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417311.1;locus_tag=PHA55_RS19215;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_001199295.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3943252	3944445	.	-	.	ID=gene-PHA55_RS19220;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=PHA55_RS19220;old_locus_tag=PHA55_19215
NZ_CP116044.1	Protein Homology	CDS	3943252	3944445	.	-	0	ID=cds-WP_260589847.1;Parent=gene-PHA55_RS19220;Dbxref=Genbank:WP_260589847.1;Name=WP_260589847.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417312.1;locus_tag=PHA55_RS19220;product=lysophospholipid transporter LplT;protein_id=WP_260589847.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3944438	3946597	.	-	.	ID=gene-PHA55_RS19225;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=PHA55_RS19225;old_locus_tag=PHA55_19220
NZ_CP116044.1	Protein Homology	CDS	3944438	3946597	.	-	0	ID=cds-WP_271287472.1;Parent=gene-PHA55_RS19225;Dbxref=Genbank:WP_271287472.1;Name=WP_271287472.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311720.1;locus_tag=PHA55_RS19225;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WP_271287472.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3947183	3948214	.	+	.	ID=gene-PHA55_RS19230;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=PHA55_RS19230;old_locus_tag=PHA55_19225
NZ_CP116044.1	Protein Homology	CDS	3947183	3948214	.	+	0	ID=cds-WP_000201048.1;Parent=gene-PHA55_RS19230;Dbxref=Genbank:WP_000201048.1;Name=WP_000201048.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417314.1;locus_tag=PHA55_RS19230;product=HTH-type transcriptional regulator GalR;protein_id=WP_000201048.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3948221	3949483	.	-	.	ID=gene-PHA55_RS19235;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=PHA55_RS19235;old_locus_tag=PHA55_19230
NZ_CP116044.1	Protein Homology	CDS	3948221	3949483	.	-	0	ID=cds-WP_032254493.1;Parent=gene-PHA55_RS19235;Dbxref=Genbank:WP_032254493.1;Name=WP_032254493.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417315.1;locus_tag=PHA55_RS19235;product=diaminopimelate decarboxylase;protein_id=WP_032254493.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3949605	3950540	.	+	.	ID=gene-PHA55_RS19240;Name=lysR;gbkey=Gene;gene=lysR;gene_biotype=protein_coding;locus_tag=PHA55_RS19240;old_locus_tag=PHA55_19235
NZ_CP116044.1	Protein Homology	CDS	3949605	3950540	.	+	0	ID=cds-WP_000741827.1;Parent=gene-PHA55_RS19240;Dbxref=Genbank:WP_000741827.1;Name=WP_000741827.1;gbkey=CDS;gene=lysR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311723.1;locus_tag=PHA55_RS19240;product=DNA-binding transcriptional regulator LysR;protein_id=WP_000741827.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3950527	3951219	.	-	.	ID=gene-PHA55_RS19245;Name=ygeA;gbkey=Gene;gene=ygeA;gene_biotype=protein_coding;locus_tag=PHA55_RS19245;old_locus_tag=PHA55_19240
NZ_CP116044.1	Protein Homology	CDS	3950527	3951219	.	-	0	ID=cds-WP_000848656.1;Parent=gene-PHA55_RS19245;Dbxref=Genbank:WP_000848656.1;Name=WP_000848656.1;gbkey=CDS;gene=ygeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311724.1;locus_tag=PHA55_RS19245;product=amino acid racemase;protein_id=WP_000848656.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3951348	3952766	.	-	.	ID=gene-PHA55_RS19250;Name=araE;gbkey=Gene;gene=araE;gene_biotype=protein_coding;locus_tag=PHA55_RS19250;old_locus_tag=PHA55_19245
NZ_CP116044.1	Protein Homology	CDS	3951348	3952766	.	-	0	ID=cds-WP_001378357.1;Parent=gene-PHA55_RS19250;Dbxref=Genbank:WP_001378357.1;Name=WP_001378357.1;gbkey=CDS;gene=araE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311725.1;locus_tag=PHA55_RS19250;product=arabinose-proton symporter AraE;protein_id=WP_001378357.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3953081	3953842	.	-	.	ID=gene-PHA55_RS19255;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=PHA55_RS19255;old_locus_tag=PHA55_19250
NZ_CP116044.1	Protein Homology	CDS	3953081	3953842	.	-	0	ID=cds-WP_000603508.1;Parent=gene-PHA55_RS19255;Dbxref=Genbank:WP_000603508.1;Name=WP_000603508.1;Ontology_term=GO:0000272,GO:0008678,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=2-deoxy-D-gluconate 3-dehydrogenase activity|0008678||IEA,oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417319.1;locus_tag=PHA55_RS19255;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_000603508.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3953872	3954708	.	-	.	ID=gene-PHA55_RS19260;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=PHA55_RS19260;old_locus_tag=PHA55_19255
NZ_CP116044.1	Protein Homology	CDS	3953872	3954708	.	-	0	ID=cds-WP_000383224.1;Parent=gene-PHA55_RS19260;Dbxref=Genbank:WP_000383224.1;Name=WP_000383224.1;Ontology_term=GO:0045490,GO:0008697;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417320.1;locus_tag=PHA55_RS19260;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=WP_000383224.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3954995	3956176	.	-	.	ID=gene-PHA55_RS19265;Name=yqeF;gbkey=Gene;gene=yqeF;gene_biotype=protein_coding;locus_tag=PHA55_RS19265;old_locus_tag=PHA55_19260
NZ_CP116044.1	Protein Homology	CDS	3954995	3956176	.	-	0	ID=cds-WP_000656029.1;Parent=gene-PHA55_RS19265;Dbxref=Genbank:WP_000656029.1;Name=WP_000656029.1;gbkey=CDS;gene=yqeF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417321.2;locus_tag=PHA55_RS19265;product=acetyl-CoA C-acetyltransferase;protein_id=WP_000656029.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3956431	3957660	.	+	.	ID=gene-PHA55_RS19270;Name=yqeG;gbkey=Gene;gene=yqeG;gene_biotype=protein_coding;locus_tag=PHA55_RS19270;old_locus_tag=PHA55_19265
NZ_CP116044.1	Protein Homology	CDS	3956431	3957660	.	+	0	ID=cds-WP_000065950.1;Parent=gene-PHA55_RS19270;Dbxref=Genbank:WP_000065950.1;Name=WP_000065950.1;gbkey=CDS;gene=yqeG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311729.1;locus_tag=PHA55_RS19270;product=amino acid permease;protein_id=WP_000065950.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3958120	3958752	.	+	.	ID=gene-PHA55_RS19275;Name=yqeH;gbkey=Gene;gene=yqeH;gene_biotype=protein_coding;locus_tag=PHA55_RS19275;old_locus_tag=PHA55_19270
NZ_CP116044.1	Protein Homology	CDS	3958120	3958752	.	+	0	ID=cds-WP_001406068.1;Parent=gene-PHA55_RS19275;Dbxref=Genbank:WP_001406068.1;Name=WP_001406068.1;gbkey=CDS;gene=yqeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417323.2;locus_tag=PHA55_RS19275;product=helix-turn-helix transcriptional regulator;protein_id=WP_001406068.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3959085	3959894	.	+	.	ID=gene-PHA55_RS19280;Name=yqeI;gbkey=Gene;gene=yqeI;gene_biotype=protein_coding;locus_tag=PHA55_RS19280;old_locus_tag=PHA55_19275
NZ_CP116044.1	Protein Homology	CDS	3959085	3959894	.	+	0	ID=cds-WP_001313226.1;Parent=gene-PHA55_RS19280;Dbxref=Genbank:WP_001313226.1;Name=WP_001313226.1;gbkey=CDS;gene=yqeI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417324.1;locus_tag=PHA55_RS19280;product=transcriptional regulator;protein_id=WP_001313226.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3959887	3960369	.	+	.	ID=gene-PHA55_RS19285;Name=yqeJ;gbkey=Gene;gene=yqeJ;gene_biotype=protein_coding;locus_tag=PHA55_RS19285;old_locus_tag=PHA55_19280
NZ_CP116044.1	Protein Homology	CDS	3959887	3960369	.	+	0	ID=cds-WP_000568336.1;Parent=gene-PHA55_RS19285;Dbxref=Genbank:WP_000568336.1;Name=WP_000568336.1;gbkey=CDS;gene=yqeJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417325.4;locus_tag=PHA55_RS19285;product=protein YqeJ;protein_id=WP_000568336.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3960402	3960482	.	-	.	ID=gene-PHA55_RS19290;Name=PHA55_RS19290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS19290;old_locus_tag=PHA55_19285
NZ_CP116044.1	Protein Homology	CDS	3960402	3960482	.	-	0	ID=cds-WP_000655821.1;Parent=gene-PHA55_RS19290;Dbxref=Genbank:WP_000655821.1;Name=WP_000655821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791253.1;locus_tag=PHA55_RS19290;product=hypothetical protein;protein_id=WP_000655821.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	3960518	3960942	.	-	.	ID=gene-PHA55_RS19295;Name=yqeK;gbkey=Gene;gene=yqeK;gene_biotype=pseudogene;locus_tag=PHA55_RS19295;old_locus_tag=PHA55_19290;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	3960518	3960942	.	-	0	ID=cds-PHA55_RS19295;Parent=gene-PHA55_RS19295;Note=frameshifted;gbkey=CDS;gene=yqeK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417326.2;locus_tag=PHA55_RS19295;product=protein YqeK;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	3961136	3961626	.	+	.	ID=gene-PHA55_RS19300;Name=PHA55_RS19300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS19300;old_locus_tag=PHA55_19295;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	3961136	3961626	.	+	0	ID=cds-PHA55_RS19300;Parent=gene-PHA55_RS19300;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311734.1;locus_tag=PHA55_RS19300;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	3961851	3962309	.	+	.	ID=gene-PHA55_RS19305;Name=ygeG;gbkey=Gene;gene=ygeG;gene_biotype=protein_coding;locus_tag=PHA55_RS19305;old_locus_tag=PHA55_19300
NZ_CP116044.1	Protein Homology	CDS	3961851	3962309	.	+	0	ID=cds-WP_236917770.1;Parent=gene-PHA55_RS19305;Dbxref=Genbank:WP_236917770.1;Name=WP_236917770.1;gbkey=CDS;gene=ygeG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417328.1;locus_tag=PHA55_RS19305;product=tetratricopeptide repeat protein;protein_id=WP_236917770.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3962677	3964053	.	+	.	ID=gene-PHA55_RS19310;Name=ygeH;gbkey=Gene;gene=ygeH;gene_biotype=protein_coding;locus_tag=PHA55_RS19310;old_locus_tag=PHA55_19305
NZ_CP116044.1	Protein Homology	CDS	3962677	3964053	.	+	0	ID=cds-WP_000362702.1;Parent=gene-PHA55_RS19310;Dbxref=Genbank:WP_000362702.1;Name=WP_000362702.1;gbkey=CDS;gene=ygeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417329.1;locus_tag=PHA55_RS19310;product=HilA family transcriptional regulator YgeH;protein_id=WP_000362702.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3964221	3964439	.	+	.	ID=gene-PHA55_RS19315;Name=ygeI;gbkey=Gene;gene=ygeI;gene_biotype=protein_coding;locus_tag=PHA55_RS19315;old_locus_tag=PHA55_19310
NZ_CP116044.1	Protein Homology	CDS	3964221	3964439	.	+	0	ID=cds-WP_000184091.1;Parent=gene-PHA55_RS19315;Dbxref=Genbank:WP_000184091.1;Name=WP_000184091.1;gbkey=CDS;gene=ygeI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417330.1;locus_tag=PHA55_RS19315;product=protein YgeI;protein_id=WP_000184091.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3964624	3964998	.	+	.	ID=gene-PHA55_RS19320;Name=PHA55_RS19320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS19320;old_locus_tag=PHA55_19315
NZ_CP116044.1	Protein Homology	CDS	3964624	3964998	.	+	0	ID=cds-WP_001315817.1;Parent=gene-PHA55_RS19320;Dbxref=Genbank:WP_001315817.1;Name=WP_001315817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001701049.1;locus_tag=PHA55_RS19320;product=lytic transglycosylase domain-containing protein;protein_id=WP_001315817.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	3965043	3965675	.	-	.	ID=gene-PHA55_RS19325;Name=PHA55_RS19325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS19325;old_locus_tag=PHA55_19320;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	3965043	3965675	.	-	0	ID=cds-PHA55_RS19325;Parent=gene-PHA55_RS19325;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311739.1;locus_tag=PHA55_RS19325;product=response regulator transcription factor;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	3965886	3966317	.	-	.	ID=gene-PHA55_RS19330;Name=PHA55_RS19330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS19330;old_locus_tag=PHA55_19325
NZ_CP116044.1	Protein Homology	CDS	3965886	3966317	.	-	0	ID=cds-WP_001299900.1;Parent=gene-PHA55_RS19330;Dbxref=Genbank:WP_001299900.1;Name=WP_001299900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001701978.1;locus_tag=PHA55_RS19330;product=hypothetical protein;protein_id=WP_001299900.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	3966534	3967114	.	-	.	ID=gene-PHA55_RS19335;Name=PHA55_RS19335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS19335;old_locus_tag=PHA55_19330;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	3966534	3967114	.	-	0	ID=cds-PHA55_RS19335;Parent=gene-PHA55_RS19335;Note=frameshifted;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311742.1;locus_tag=PHA55_RS19335;product=type III secretion apparatus protein OrgA/MxiK;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	3967130	3967864	.	-	.	ID=gene-PHA55_RS19340;Name=PHA55_RS19340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS19340;old_locus_tag=PHA55_19335
NZ_CP116044.1	Protein Homology	CDS	3967130	3967864	.	-	0	ID=cds-WP_000875234.1;Parent=gene-PHA55_RS19340;Dbxref=Genbank:WP_000875234.1;Name=WP_000875234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311743.1;locus_tag=PHA55_RS19340;product=EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein;protein_id=WP_000875234.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	3967861	3968135	.	-	.	ID=gene-PHA55_RS19345;Name=sctI;gbkey=Gene;gene=sctI;gene_biotype=pseudogene;locus_tag=PHA55_RS19345;old_locus_tag=PHA55_19340;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	3967861	3968135	.	-	0	ID=cds-PHA55_RS19345;Parent=gene-PHA55_RS19345;Note=frameshifted;gbkey=CDS;gene=sctI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001322788.1;locus_tag=PHA55_RS19345;product=type III secretion system inner rod subunit SctI;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	3968212	3968452	.	-	.	ID=gene-PHA55_RS19350;Name=PHA55_RS19350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS19350;old_locus_tag=PHA55_19345;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	3968212	3968452	.	-	0	ID=cds-PHA55_RS19350;Parent=gene-PHA55_RS19350;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311745.1;locus_tag=PHA55_RS19350;product=type III secretion system needle complex protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	3968466	3969649	.	-	.	ID=gene-PHA55_RS19355;Name=PHA55_RS19355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS19355;old_locus_tag=PHA55_19350;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	3968466	3969649	.	-	0	ID=cds-PHA55_RS19355;Parent=gene-PHA55_RS19355;Note=frameshifted;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001365813.1;locus_tag=PHA55_RS19355;product=PrgH/EprH family type III secretion apparatus protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	3969907	3970407	.	+	.	ID=gene-PHA55_RS19360;Name=PHA55_RS19360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS19360;old_locus_tag=PHA55_19355;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	3969907	3970407	.	+	0	ID=cds-PHA55_RS19360;Parent=gene-PHA55_RS19360;Note=internal stop;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311747.1;locus_tag=PHA55_RS19360;product=LuxR C-terminal-related transcriptional regulator;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	3970409	3970702	.	+	.	ID=gene-PHA55_RS19365;Name=PHA55_RS19365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS19365;old_locus_tag=PHA55_19360
NZ_CP116044.1	Protein Homology	CDS	3970409	3970702	.	+	0	ID=cds-WP_000060558.1;Parent=gene-PHA55_RS19365;Dbxref=Genbank:WP_000060558.1;Name=WP_000060558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000060689.1;locus_tag=PHA55_RS19365;product=invasion protein;protein_id=WP_000060558.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	3970763	3971882	.	-	.	ID=gene-PHA55_RS19370;Name=PHA55_RS19370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS19370;old_locus_tag=PHA55_19365;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	3970763	3971882	.	-	0	ID=cds-PHA55_RS19370;Parent=gene-PHA55_RS19370;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311748.1;locus_tag=PHA55_RS19370;product=EscU/YscU/HrcU family type III secretion system export apparatus switch protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	3971891	3972658	.	-	.	ID=gene-PHA55_RS19375;Name=sctT;gbkey=Gene;gene=sctT;gene_biotype=protein_coding;locus_tag=PHA55_RS19375;old_locus_tag=PHA55_19370
NZ_CP116044.1	Protein Homology	CDS	3971891	3972658	.	-	0	ID=cds-WP_000503281.1;Parent=gene-PHA55_RS19375;Dbxref=Genbank:WP_000503281.1;Name=WP_000503281.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctT;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: protein motif:HMM:TIGR01401.1;locus_tag=PHA55_RS19375;product=type III secretion system export apparatus subunit SctT;protein_id=WP_000503281.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3972660	3972920	.	-	.	ID=gene-PHA55_RS19380;Name=PHA55_RS19380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS19380;old_locus_tag=PHA55_19375
NZ_CP116044.1	Protein Homology	CDS	3972660	3972920	.	-	0	ID=cds-WP_000341004.1;Parent=gene-PHA55_RS19380;Dbxref=Genbank:WP_000341004.1;Name=WP_000341004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311751.1;locus_tag=PHA55_RS19380;product=EscS/YscS/HrcS family type III secretion system export apparatus protein;protein_id=WP_000341004.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3972930	3973595	.	-	.	ID=gene-PHA55_RS19385;Name=PHA55_RS19385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS19385;old_locus_tag=PHA55_19380
NZ_CP116044.1	Protein Homology	CDS	3972930	3973595	.	-	0	ID=cds-WP_000071534.1;Parent=gene-PHA55_RS19385;Dbxref=Genbank:WP_000071534.1;Name=WP_000071534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311752.1;locus_tag=PHA55_RS19385;product=EscR/YscR/HrcR family type III secretion system export apparatus protein;protein_id=WP_000071534.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	3973585	3974572	.	-	.	ID=gene-PHA55_RS19390;Name=PHA55_RS19390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS19390;old_locus_tag=PHA55_19385;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	3973585	3974572	.	-	0	ID=cds-PHA55_RS19390;Parent=gene-PHA55_RS19390;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311753.1;locus_tag=PHA55_RS19390;product=YscQ/HrcQ family type III secretion apparatus protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	3974664	3976274	.	-	.	ID=gene-PHA55_RS19395;Name=PHA55_RS19395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS19395;old_locus_tag=PHA55_19390
NZ_CP116044.1	Protein Homology	CDS	3974664	3976274	.	-	0	ID=cds-WP_000676938.1;Parent=gene-PHA55_RS19395;Dbxref=Genbank:WP_000676938.1;Name=WP_000676938.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012926.2;locus_tag=PHA55_RS19395;product=glycoside hydrolase family 15 protein;protein_id=WP_000676938.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3976508	3976581	.	-	.	ID=gene-PHA55_RS19400;Name=PHA55_RS19400;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS19400;old_locus_tag=PHA55_19395
NZ_CP116044.1	tRNAscan-SE	tRNA	3976508	3976581	.	-	.	ID=rna-PHA55_RS19400;Parent=gene-PHA55_RS19400;anticodon=(pos:complement(3976547..3976549));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS19400;product=tRNA-Gly
NZ_CP116044.1	tRNAscan-SE	exon	3976508	3976581	.	-	.	ID=exon-PHA55_RS19400-1;Parent=rna-PHA55_RS19400;anticodon=(pos:complement(3976547..3976549));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS19400;product=tRNA-Gly
NZ_CP116044.1	RefSeq	gene	3976660	3977415	.	-	.	ID=gene-PHA55_RS19405;Name=actS;gbkey=Gene;gene=actS;gene_biotype=protein_coding;locus_tag=PHA55_RS19405;old_locus_tag=PHA55_19400
NZ_CP116044.1	Protein Homology	CDS	3976660	3977415	.	-	0	ID=cds-WP_001272558.1;Parent=gene-PHA55_RS19405;Dbxref=Genbank:WP_001272558.1;Name=WP_001272558.1;gbkey=CDS;gene=actS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311765.2;locus_tag=PHA55_RS19405;product=amidase activator ActS;protein_id=WP_001272558.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3977830	3980127	.	+	.	ID=gene-PHA55_RS19410;Name=xdhA;gbkey=Gene;gene=xdhA;gene_biotype=protein_coding;locus_tag=PHA55_RS19410;old_locus_tag=PHA55_19405
NZ_CP116044.1	Protein Homology	CDS	3977830	3980127	.	+	0	ID=cds-WP_000388150.1;Parent=gene-PHA55_RS19410;Dbxref=Genbank:WP_000388150.1;Name=WP_000388150.1;Ontology_term=GO:0005506,GO:0016491;gbkey=CDS;gene=xdhA;go_function=iron ion binding|0005506||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708647.1;locus_tag=PHA55_RS19410;product=xanthine dehydrogenase molybdenum-binding subunit XdhA;protein_id=WP_000388150.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3980138	3981016	.	+	.	ID=gene-PHA55_RS19415;Name=xdhB;gbkey=Gene;gene=xdhB;gene_biotype=protein_coding;locus_tag=PHA55_RS19415;old_locus_tag=PHA55_19410
NZ_CP116044.1	Protein Homology	CDS	3980138	3981016	.	+	0	ID=cds-WP_000459182.1;Parent=gene-PHA55_RS19415;Dbxref=Genbank:WP_000459182.1;Name=WP_000459182.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;gene=xdhB;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417343.1;locus_tag=PHA55_RS19415;product=xanthine dehydrogenase FAD-binding subunit XdhB;protein_id=WP_000459182.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3981013	3981492	.	+	.	ID=gene-PHA55_RS19420;Name=xdhC;gbkey=Gene;gene=xdhC;gene_biotype=protein_coding;locus_tag=PHA55_RS19420;old_locus_tag=PHA55_19415
NZ_CP116044.1	Protein Homology	CDS	3981013	3981492	.	+	0	ID=cds-WP_001016605.1;Parent=gene-PHA55_RS19420;Dbxref=Genbank:WP_001016605.1;Name=WP_001016605.1;gbkey=CDS;gene=xdhC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417344.1;locus_tag=PHA55_RS19420;product=xanthine dehydrogenase iron sulfur-binding subunit XdhC;protein_id=WP_001016605.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3981532	3983310	.	-	.	ID=gene-PHA55_RS19425;Name=ygeV;gbkey=Gene;gene=ygeV;gene_biotype=protein_coding;locus_tag=PHA55_RS19425;old_locus_tag=PHA55_19420
NZ_CP116044.1	Protein Homology	CDS	3981532	3983310	.	-	0	ID=cds-WP_000417808.1;Parent=gene-PHA55_RS19425;Dbxref=Genbank:WP_000417808.1;Name=WP_000417808.1;gbkey=CDS;gene=ygeV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417345.1;locus_tag=PHA55_RS19425;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=WP_000417808.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3983789	3984976	.	+	.	ID=gene-PHA55_RS19430;Name=ygeW;gbkey=Gene;gene=ygeW;gene_biotype=protein_coding;locus_tag=PHA55_RS19430;old_locus_tag=PHA55_19425
NZ_CP116044.1	Protein Homology	CDS	3983789	3984976	.	+	0	ID=cds-WP_001303128.1;Parent=gene-PHA55_RS19430;Dbxref=Genbank:WP_001303128.1;Name=WP_001303128.1;gbkey=CDS;gene=ygeW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311770.2;locus_tag=PHA55_RS19430;product=knotted carbamoyltransferase YgeW;protein_id=WP_001303128.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3985034	3986230	.	+	.	ID=gene-PHA55_RS19435;Name=dpaL;gbkey=Gene;gene=dpaL;gene_biotype=protein_coding;locus_tag=PHA55_RS19435;old_locus_tag=PHA55_19430
NZ_CP116044.1	Protein Homology	CDS	3985034	3986230	.	+	0	ID=cds-WP_000110493.1;Parent=gene-PHA55_RS19435;Dbxref=Genbank:WP_000110493.1;Name=WP_000110493.1;Ontology_term=GO:0008838,GO:0030170;gbkey=CDS;gene=dpaL;go_function=diaminopropionate ammonia-lyase activity|0008838||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311771.1;locus_tag=PHA55_RS19435;product=diaminopropionate ammonia-lyase;protein_id=WP_000110493.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3986288	3987499	.	+	.	ID=gene-PHA55_RS19440;Name=ygeY;gbkey=Gene;gene=ygeY;gene_biotype=protein_coding;locus_tag=PHA55_RS19440;old_locus_tag=PHA55_19435
NZ_CP116044.1	Protein Homology	CDS	3986288	3987499	.	+	0	ID=cds-WP_001107117.1;Parent=gene-PHA55_RS19440;Dbxref=Genbank:WP_001107117.1;Name=WP_001107117.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ygeY;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311772.1;locus_tag=PHA55_RS19440;product=YgeY family selenium metabolism-linked hydrolase;protein_id=WP_001107117.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3987552	3988937	.	+	.	ID=gene-PHA55_RS19445;Name=hyuA;gbkey=Gene;gene=hyuA;gene_biotype=protein_coding;locus_tag=PHA55_RS19445;old_locus_tag=PHA55_19440
NZ_CP116044.1	Protein Homology	CDS	3987552	3988937	.	+	0	ID=cds-WP_001264452.1;Parent=gene-PHA55_RS19445;Dbxref=Genbank:WP_001264452.1;Name=WP_001264452.1;gbkey=CDS;gene=hyuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311773.2;locus_tag=PHA55_RS19445;product=D-phenylhydantoinase;protein_id=WP_001264452.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3988985	3989917	.	+	.	ID=gene-PHA55_RS19450;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=PHA55_RS19450;old_locus_tag=PHA55_19445
NZ_CP116044.1	Protein Homology	CDS	3988985	3989917	.	+	0	ID=cds-WP_000037992.1;Parent=gene-PHA55_RS19450;Dbxref=Genbank:WP_000037992.1;Name=WP_000037992.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417350.1;locus_tag=PHA55_RS19450;product=carbamate kinase;protein_id=WP_000037992.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3989958	3991583	.	-	.	ID=gene-PHA55_RS19455;Name=yqeB;gbkey=Gene;gene=yqeB;gene_biotype=protein_coding;locus_tag=PHA55_RS19455;old_locus_tag=PHA55_19450
NZ_CP116044.1	Protein Homology	CDS	3989958	3991583	.	-	0	ID=cds-WP_001020367.1;Parent=gene-PHA55_RS19455;Dbxref=Genbank:WP_001020367.1;Name=WP_001020367.1;gbkey=CDS;gene=yqeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417351.1;locus_tag=PHA55_RS19455;product=selenium-dependent molybdenum cofactor biosynthesis protein YqeB;protein_id=WP_001020367.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3991631	3992401	.	-	.	ID=gene-PHA55_RS19460;Name=yqeC;gbkey=Gene;gene=yqeC;gene_biotype=protein_coding;locus_tag=PHA55_RS19460;old_locus_tag=PHA55_19455
NZ_CP116044.1	Protein Homology	CDS	3991631	3992401	.	-	0	ID=cds-WP_001298920.1;Parent=gene-PHA55_RS19460;Dbxref=Genbank:WP_001298920.1;Name=WP_001298920.1;gbkey=CDS;gene=yqeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417352.2;locus_tag=PHA55_RS19460;product=selenium cofactor biosynthesis protein YqeC;protein_id=WP_001298920.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3992504	3993082	.	+	.	ID=gene-PHA55_RS19465;Name=mocA;gbkey=Gene;gene=mocA;gene_biotype=protein_coding;locus_tag=PHA55_RS19465;old_locus_tag=PHA55_19460
NZ_CP116044.1	Protein Homology	CDS	3992504	3993082	.	+	0	ID=cds-WP_001272856.1;Parent=gene-PHA55_RS19465;Dbxref=Genbank:WP_001272856.1;Name=WP_001272856.1;Ontology_term=GO:0032324,GO:0070567;gbkey=CDS;gene=mocA;go_function=cytidylyltransferase activity|0070567||IEA;go_process=molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311777.1;locus_tag=PHA55_RS19465;product=molybdenum cofactor cytidylyltransferase;protein_id=WP_001272856.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3993404	3996502	.	+	.	ID=gene-PHA55_RS19470;Name=ygfK;gbkey=Gene;gene=ygfK;gene_biotype=protein_coding;locus_tag=PHA55_RS19470;old_locus_tag=PHA55_19465
NZ_CP116044.1	Protein Homology	CDS	3993404	3996502	.	+	0	ID=cds-WP_000502399.1;Parent=gene-PHA55_RS19470;Dbxref=Genbank:WP_000502399.1;Name=WP_000502399.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=ygfK;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311778.1;locus_tag=PHA55_RS19470;product=putative selenate reductase subunit YgfK;protein_id=WP_000502399.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3996505	3997833	.	+	.	ID=gene-PHA55_RS19475;Name=ssnA;gbkey=Gene;gene=ssnA;gene_biotype=protein_coding;locus_tag=PHA55_RS19475;old_locus_tag=PHA55_19470
NZ_CP116044.1	Protein Homology	CDS	3996505	3997833	.	+	0	ID=cds-WP_000906280.1;Parent=gene-PHA55_RS19475;Dbxref=Genbank:WP_000906280.1;Name=WP_000906280.1;Ontology_term=GO:0016810;gbkey=CDS;gene=ssnA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311779.1;locus_tag=PHA55_RS19475;product=putative aminohydrolase SsnA;protein_id=WP_000906280.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3997884	3998663	.	+	.	ID=gene-PHA55_RS19480;Name=ygfM;gbkey=Gene;gene=ygfM;gene_biotype=protein_coding;locus_tag=PHA55_RS19480;old_locus_tag=PHA55_19475
NZ_CP116044.1	Protein Homology	CDS	3997884	3998663	.	+	0	ID=cds-WP_000572460.1;Parent=gene-PHA55_RS19480;Dbxref=Genbank:WP_000572460.1;Name=WP_000572460.1;gbkey=CDS;gene=ygfM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311780.1;locus_tag=PHA55_RS19480;product=molybdopterin-dependent oxidoreductase FAD-binding subunit;protein_id=WP_000572460.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	3998660	4001530	.	+	.	ID=gene-PHA55_RS19485;Name=xdhD;gbkey=Gene;gene=xdhD;gene_biotype=protein_coding;locus_tag=PHA55_RS19485;old_locus_tag=PHA55_19480
NZ_CP116044.1	Protein Homology	CDS	3998660	4001530	.	+	0	ID=cds-WP_000583628.1;Parent=gene-PHA55_RS19485;Dbxref=Genbank:WP_000583628.1;Name=WP_000583628.1;gbkey=CDS;gene=xdhD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417357.1;locus_tag=PHA55_RS19485;product=molybdopterin-dependent oxidoreductase Mo/Fe-S-binding subunit;protein_id=WP_000583628.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4001695	4003095	.	+	.	ID=gene-PHA55_RS19490;Name=xanQ;gbkey=Gene;gene=xanQ;gene_biotype=protein_coding;locus_tag=PHA55_RS19490;old_locus_tag=PHA55_19485
NZ_CP116044.1	Protein Homology	CDS	4001695	4003095	.	+	0	ID=cds-WP_001280215.1;Parent=gene-PHA55_RS19490;Dbxref=Genbank:WP_001280215.1;Name=WP_001280215.1;gbkey=CDS;gene=xanQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417358.2;locus_tag=PHA55_RS19490;product=xanthine/proton symporter XanQ;protein_id=WP_001280215.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4003113	4004429	.	+	.	ID=gene-PHA55_RS19495;Name=guaD;gbkey=Gene;gene=guaD;gene_biotype=protein_coding;locus_tag=PHA55_RS19495;old_locus_tag=PHA55_19490
NZ_CP116044.1	Protein Homology	CDS	4003113	4004429	.	+	0	ID=cds-WP_001295158.1;Parent=gene-PHA55_RS19495;Dbxref=Genbank:WP_001295158.1;Name=WP_001295158.1;Ontology_term=GO:0006147,GO:0008892;gbkey=CDS;gene=guaD;go_function=guanine deaminase activity|0008892||IEA;go_process=guanine catabolic process|0006147||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311783.2;locus_tag=PHA55_RS19495;product=guanine deaminase;protein_id=WP_001295158.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4004465	4005832	.	+	.	ID=gene-PHA55_RS19500;Name=ghxQ;gbkey=Gene;gene=ghxQ;gene_biotype=protein_coding;gene_synonym=ygfQ;locus_tag=PHA55_RS19500;old_locus_tag=PHA55_19495
NZ_CP116044.1	Protein Homology	CDS	4004465	4005832	.	+	0	ID=cds-WP_000012163.1;Parent=gene-PHA55_RS19500;Dbxref=Genbank:WP_000012163.1;Name=WP_000012163.1;gbkey=CDS;gene=ghxQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311784.1;locus_tag=PHA55_RS19500;product=guanine/hypoxanthine transporter GhxQ;protein_id=WP_000012163.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4005868	4006356	.	-	.	ID=gene-PHA55_RS19505;Name=ygfS;gbkey=Gene;gene=ygfS;gene_biotype=protein_coding;locus_tag=PHA55_RS19505;old_locus_tag=PHA55_19500
NZ_CP116044.1	Protein Homology	CDS	4005868	4006356	.	-	0	ID=cds-WP_000838428.1;Parent=gene-PHA55_RS19505;Dbxref=Genbank:WP_000838428.1;Name=WP_000838428.1;gbkey=CDS;gene=ygfS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417362.4;locus_tag=PHA55_RS19505;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_000838428.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4006356	4008275	.	-	.	ID=gene-PHA55_RS19510;Name=ygfT;gbkey=Gene;gene=ygfT;gene_biotype=protein_coding;locus_tag=PHA55_RS19510;old_locus_tag=PHA55_19505
NZ_CP116044.1	Protein Homology	CDS	4006356	4008275	.	-	0	ID=cds-WP_001345944.1;Parent=gene-PHA55_RS19510;Dbxref=Genbank:WP_001345944.1;Name=WP_001345944.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=ygfT;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417363.2;locus_tag=PHA55_RS19510;product=formate-dependent uric acid utilization protein YgfT;protein_id=WP_001345944.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4008711	4010159	.	+	.	ID=gene-PHA55_RS19515;Name=uacT;gbkey=Gene;gene=uacT;gene_biotype=protein_coding;locus_tag=PHA55_RS19515;old_locus_tag=PHA55_19510
NZ_CP116044.1	Protein Homology	CDS	4008711	4010159	.	+	0	ID=cds-WP_001295374.1;Parent=gene-PHA55_RS19515;Dbxref=Genbank:WP_001295374.1;Name=WP_001295374.1;gbkey=CDS;gene=uacT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417364.2;locus_tag=PHA55_RS19515;product=urate/proton symporter UacT;protein_id=WP_001295374.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4010161	4010286	.	+	.	ID=gene-PHA55_RS19520;Name=yqfG;gbkey=Gene;gene=yqfG;gene_biotype=protein_coding;locus_tag=PHA55_RS19520;old_locus_tag=PHA55_19515
NZ_CP116044.1	Protein Homology	CDS	4010161	4010286	.	+	0	ID=cds-WP_001010156.1;Parent=gene-PHA55_RS19520;Dbxref=Genbank:WP_001010156.1;Name=WP_001010156.1;gbkey=CDS;gene=yqfG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791254.1;locus_tag=PHA55_RS19520;product=protein YqfG;protein_id=WP_001010156.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4010283	4010354	.	-	.	ID=gene-PHA55_RS19525;Name=PHA55_RS19525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS19525;old_locus_tag=PHA55_19520
NZ_CP116044.1	Protein Homology	CDS	4010283	4010354	.	-	0	ID=cds-WP_120795390.1;Parent=gene-PHA55_RS19525;Dbxref=Genbank:WP_120795390.1;Name=WP_120795390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518812.1;locus_tag=PHA55_RS19525;product=protein YqfH;protein_id=WP_120795390.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4010409	4010957	.	+	.	ID=gene-PHA55_RS19530;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=PHA55_RS19530;old_locus_tag=PHA55_19525
NZ_CP116044.1	Protein Homology	CDS	4010409	4010957	.	+	0	ID=cds-WP_001192804.1;Parent=gene-PHA55_RS19530;Dbxref=Genbank:WP_001192804.1;Name=WP_001192804.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708654.1;locus_tag=PHA55_RS19530;product=isopentenyl-diphosphate Delta-isomerase;protein_id=WP_001192804.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4011000	4012517	.	-	.	ID=gene-PHA55_RS19535;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=PHA55_RS19535;old_locus_tag=PHA55_19530
NZ_CP116044.1	Protein Homology	CDS	4011000	4012517	.	-	0	ID=cds-WP_000003068.1;Parent=gene-PHA55_RS19535;Dbxref=Genbank:WP_000003068.1;Name=WP_000003068.1;Ontology_term=GO:0006430,GO:0004824,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=PHA55_RS19535;product=lysine--tRNA ligase;protein_id=WP_000003068.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4012527	4013625	.	-	.	ID=gene-PHA55_RS19540;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=PHA55_RS19540;old_locus_tag=PHA55_19535
NZ_CP116044.1	Protein Homology	CDS	4013551	4013625	.	-	0	ID=cds-WP_001701073.1;Parent=gene-PHA55_RS19540;Dbxref=Genbank:WP_001701073.1;Name=WP_001701073.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=PHA55_RS19540;product=peptide chain release factor 2;protein_id=WP_001701073.1;transl_table=11
NZ_CP116044.1	Protein Homology	CDS	4012527	4013549	.	-	0	ID=cds-WP_001701073.1;Parent=gene-PHA55_RS19540;Dbxref=Genbank:WP_001701073.1;Name=WP_001701073.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=PHA55_RS19540;product=peptide chain release factor 2;protein_id=WP_001701073.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4013716	4015449	.	-	.	ID=gene-PHA55_RS19545;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=PHA55_RS19545;old_locus_tag=PHA55_19540
NZ_CP116044.1	Protein Homology	CDS	4013716	4015449	.	-	0	ID=cds-WP_271287473.1;Parent=gene-PHA55_RS19545;Dbxref=Genbank:WP_271287473.1;Name=WP_271287473.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311791.1;locus_tag=PHA55_RS19545;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_271287473.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4015455	4016165	.	-	.	ID=gene-PHA55_RS19550;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=PHA55_RS19550;old_locus_tag=PHA55_19545
NZ_CP116044.1	Protein Homology	CDS	4015455	4016165	.	-	0	ID=cds-WP_000715214.1;Parent=gene-PHA55_RS19550;Dbxref=Genbank:WP_000715214.1;Name=WP_000715214.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311792.1;locus_tag=PHA55_RS19550;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_000715214.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4016190	4017086	.	-	.	ID=gene-PHA55_RS19555;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=PHA55_RS19555;old_locus_tag=PHA55_19550
NZ_CP116044.1	Protein Homology	CDS	4016190	4017086	.	-	0	ID=cds-WP_000806638.1;Parent=gene-PHA55_RS19555;Dbxref=Genbank:WP_000806638.1;Name=WP_000806638.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417370.1;locus_tag=PHA55_RS19555;product=site-specific tyrosine recombinase XerD;protein_id=WP_000806638.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4017198	4017719	.	+	.	ID=gene-PHA55_RS19560;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=PHA55_RS19560;old_locus_tag=PHA55_19555
NZ_CP116044.1	Protein Homology	CDS	4017198	4017719	.	+	0	ID=cds-WP_001055874.1;Parent=gene-PHA55_RS19560;Dbxref=Genbank:WP_001055874.1;Name=WP_001055874.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311794.1;locus_tag=PHA55_RS19560;product=flavodoxin FldB;protein_id=WP_001055874.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4017759	4018166	.	-	.	ID=gene-PHA55_RS19565;Name=ygfX;gbkey=Gene;gene=ygfX;gene_biotype=protein_coding;locus_tag=PHA55_RS19565;old_locus_tag=PHA55_19560
NZ_CP116044.1	Protein Homology	CDS	4017759	4018166	.	-	0	ID=cds-WP_000244772.1;Parent=gene-PHA55_RS19565;Dbxref=Genbank:WP_000244772.1;Name=WP_000244772.1;gbkey=CDS;gene=ygfX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417372.1;locus_tag=PHA55_RS19565;product=protein YgfX;protein_id=WP_000244772.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4018147	4018413	.	-	.	ID=gene-PHA55_RS19570;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=PHA55_RS19570;old_locus_tag=PHA55_19565
NZ_CP116044.1	Protein Homology	CDS	4018147	4018413	.	-	0	ID=cds-WP_000354046.1;Parent=gene-PHA55_RS19570;Dbxref=Genbank:WP_000354046.1;Name=WP_000354046.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=PHA55_RS19570;product=FAD assembly factor SdhE;protein_id=WP_000354046.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4018656	4019636	.	+	.	ID=gene-PHA55_RS19575;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=PHA55_RS19575;old_locus_tag=PHA55_19570
NZ_CP116044.1	Protein Homology	CDS	4018656	4019636	.	+	0	ID=cds-WP_000886062.1;Parent=gene-PHA55_RS19575;Dbxref=Genbank:WP_000886062.1;Name=WP_000886062.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417374.1;locus_tag=PHA55_RS19575;product=tRNA-modifying protein YgfZ;protein_id=WP_000886062.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4019713	4020372	.	-	.	ID=gene-PHA55_RS19580;Name=yqfA;gbkey=Gene;gene=yqfA;gene_biotype=protein_coding;locus_tag=PHA55_RS19580;old_locus_tag=PHA55_19575
NZ_CP116044.1	Protein Homology	CDS	4019713	4020372	.	-	0	ID=cds-WP_000250274.1;Parent=gene-PHA55_RS19580;Dbxref=Genbank:WP_000250274.1;Name=WP_000250274.1;Ontology_term=GO:0019835;gbkey=CDS;gene=yqfA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311798.1;locus_tag=PHA55_RS19580;product=hemolysin III family protein;protein_id=WP_000250274.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4020536	4020847	.	-	.	ID=gene-PHA55_RS19585;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=PHA55_RS19585;old_locus_tag=PHA55_19580
NZ_CP116044.1	Protein Homology	CDS	4020536	4020847	.	-	0	ID=cds-WP_001182954.1;Parent=gene-PHA55_RS19585;Dbxref=Genbank:WP_001182954.1;Name=WP_001182954.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311799.1;locus_tag=PHA55_RS19585;product=N(4)-acetylcytidine aminohydrolase;protein_id=WP_001182954.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4020892	4022325	.	+	.	ID=gene-PHA55_RS19590;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=protein_coding;locus_tag=PHA55_RS19590;old_locus_tag=PHA55_19585
NZ_CP116044.1	Protein Homology	CDS	4020892	4022325	.	+	0	ID=cds-WP_050864001.1;Parent=gene-PHA55_RS19590;Dbxref=Genbank:WP_050864001.1;Name=WP_050864001.1;gbkey=CDS;gene=bglA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708664.2;locus_tag=PHA55_RS19590;product=6-phospho-beta-glucosidase BglA;protein_id=WP_050864001.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4022382	4023125	.	-	.	ID=gene-PHA55_RS19595;Name=ygfF;gbkey=Gene;gene=ygfF;gene_biotype=protein_coding;locus_tag=PHA55_RS19595;old_locus_tag=PHA55_19590
NZ_CP116044.1	Protein Homology	CDS	4022382	4023125	.	-	0	ID=cds-WP_000951964.1;Parent=gene-PHA55_RS19595;Dbxref=Genbank:WP_000951964.1;Name=WP_000951964.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ygfF;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417378.1;locus_tag=PHA55_RS19595;product=SDR family oxidoreductase;protein_id=WP_000951964.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4023386	4026259	.	-	.	ID=gene-PHA55_RS19600;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=PHA55_RS19600;old_locus_tag=PHA55_19595
NZ_CP116044.1	Protein Homology	CDS	4023386	4026259	.	-	0	ID=cds-WP_033817484.1;Parent=gene-PHA55_RS19600;Dbxref=Genbank:WP_033817484.1;Name=WP_033817484.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311801.1;locus_tag=PHA55_RS19600;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_033817484.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4026378	4026767	.	-	.	ID=gene-PHA55_RS19605;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=PHA55_RS19605;old_locus_tag=PHA55_19600
NZ_CP116044.1	Protein Homology	CDS	4026378	4026767	.	-	0	ID=cds-WP_001295377.1;Parent=gene-PHA55_RS19605;Dbxref=Genbank:WP_001295377.1;Name=WP_001295377.1;Ontology_term=GO:0019464,GO:0003824;gbkey=CDS;gene=gcvH;go_function=catalytic activity|0003824||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=PHA55_RS19605;product=glycine cleavage system protein GcvH;protein_id=WP_001295377.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4026791	4027885	.	-	.	ID=gene-PHA55_RS19610;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=PHA55_RS19610;old_locus_tag=PHA55_19605
NZ_CP116044.1	Protein Homology	CDS	4026791	4027885	.	-	0	ID=cds-WP_000068701.1;Parent=gene-PHA55_RS19610;Dbxref=Genbank:WP_000068701.1;Name=WP_000068701.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417381.1;locus_tag=PHA55_RS19610;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_000068701.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4028175	4028258	.	+	.	ID=gene-PHA55_RS19615;Name=PHA55_RS19615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS19615;old_locus_tag=PHA55_19610
NZ_CP116044.1	Protein Homology	CDS	4028175	4028258	.	+	0	ID=cds-WP_122056850.1;Parent=gene-PHA55_RS19615;Dbxref=Genbank:WP_122056850.1;Name=WP_122056850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518813.1;locus_tag=PHA55_RS19615;product=hypothetical protein;protein_id=WP_122056850.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4028332	4029534	.	-	.	ID=gene-PHA55_RS19620;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=PHA55_RS19620;old_locus_tag=PHA55_19615
NZ_CP116044.1	Protein Homology	CDS	4028332	4029534	.	-	0	ID=cds-WP_021542235.1;Parent=gene-PHA55_RS19620;Dbxref=Genbank:WP_021542235.1;Name=WP_021542235.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311804.1;locus_tag=PHA55_RS19620;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WP_021542235.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4029557	4030735	.	-	.	ID=gene-PHA55_RS19625;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=PHA55_RS19625;old_locus_tag=PHA55_19620
NZ_CP116044.1	Protein Homology	CDS	4029557	4030735	.	-	0	ID=cds-WP_033817485.1;Parent=gene-PHA55_RS19625;Dbxref=Genbank:WP_033817485.1;Name=WP_033817485.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708670.1;locus_tag=PHA55_RS19625;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_033817485.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4030732	4032057	.	-	.	ID=gene-PHA55_RS19630;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=PHA55_RS19630;old_locus_tag=PHA55_19625
NZ_CP116044.1	Protein Homology	CDS	4030732	4032057	.	-	0	ID=cds-WP_001290129.1;Parent=gene-PHA55_RS19630;Dbxref=Genbank:WP_001290129.1;Name=WP_001290129.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708671.1;locus_tag=PHA55_RS19630;product=Xaa-Pro aminopeptidase;protein_id=WP_001290129.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4032083	4032661	.	-	.	ID=gene-PHA55_RS19635;Name=ygfB;gbkey=Gene;gene=ygfB;gene_biotype=protein_coding;locus_tag=PHA55_RS19635;old_locus_tag=PHA55_19630
NZ_CP116044.1	Protein Homology	CDS	4032083	4032661	.	-	0	ID=cds-WP_001295378.1;Parent=gene-PHA55_RS19635;Dbxref=Genbank:WP_001295378.1;Name=WP_001295378.1;gbkey=CDS;gene=ygfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708672.2;locus_tag=PHA55_RS19635;product=UPF0149 family protein YgfB;protein_id=WP_001295378.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4032829	4033158	.	+	.	ID=gene-PHA55_RS19640;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=PHA55_RS19640;old_locus_tag=PHA55_19635
NZ_CP116044.1	Protein Homology	CDS	4032829	4033158	.	+	0	ID=cds-WP_001276008.1;Parent=gene-PHA55_RS19640;Dbxref=Genbank:WP_001276008.1;Name=WP_001276008.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311808.1;locus_tag=PHA55_RS19640;product=cell division protein ZapA;protein_id=WP_001276008.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4033200	4033383	.	+	.	ID=gene-PHA55_RS19645;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=PHA55_RS19645;old_locus_tag=PHA55_19640
NZ_CP116044.1	cmsearch	ncRNA	4033200	4033383	.	+	.	ID=rna-PHA55_RS19645;Parent=gene-PHA55_RS19645;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS19645;product=6S RNA
NZ_CP116044.1	cmsearch	exon	4033200	4033383	.	+	.	ID=exon-PHA55_RS19645-1;Parent=rna-PHA55_RS19645;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS19645;product=6S RNA
NZ_CP116044.1	RefSeq	gene	4033404	4034006	.	+	.	ID=gene-PHA55_RS19650;Name=fau;gbkey=Gene;gene=fau;gene_biotype=protein_coding;locus_tag=PHA55_RS19650;old_locus_tag=PHA55_19645
NZ_CP116044.1	Protein Homology	CDS	4033404	4034006	.	+	0	ID=cds-WP_000192748.1;Parent=gene-PHA55_RS19650;Dbxref=Genbank:WP_000192748.1;Name=WP_000192748.1;gbkey=CDS;gene=fau;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311809.4;locus_tag=PHA55_RS19650;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_000192748.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4034107	4034166	.	-	.	ID=gene-PHA55_RS19655;Name=PHA55_RS19655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS19655;old_locus_tag=PHA55_19650
NZ_CP116044.1	Protein Homology	CDS	4034107	4034166	.	-	0	ID=cds-WP_001387035.1;Parent=gene-PHA55_RS19655;Dbxref=Genbank:WP_001387035.1;Name=WP_001387035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791255.1;locus_tag=PHA55_RS19655;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001387035.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4034499	4034558	.	-	.	ID=gene-PHA55_RS19660;Name=ibsC;gbkey=Gene;gene=ibsC;gene_biotype=protein_coding;locus_tag=PHA55_RS19660;old_locus_tag=PHA55_19655
NZ_CP116044.1	Protein Homology	CDS	4034499	4034558	.	-	0	ID=cds-WP_071524576.1;Parent=gene-PHA55_RS19660;Dbxref=Genbank:WP_071524576.1;Name=WP_071524576.1;gbkey=CDS;gene=ibsC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791255.1;locus_tag=PHA55_RS19660;product=type I toxin-antitoxin system toxin IbsC;protein_id=WP_071524576.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4034787	4036019	.	-	.	ID=gene-PHA55_RS19665;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=PHA55_RS19665;old_locus_tag=PHA55_19660
NZ_CP116044.1	Protein Homology	CDS	4034787	4036019	.	-	0	ID=cds-WP_001151604.1;Parent=gene-PHA55_RS19665;Dbxref=Genbank:WP_001151604.1;Name=WP_001151604.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311811.1;locus_tag=PHA55_RS19665;product=phosphoglycerate dehydrogenase;protein_id=WP_001151604.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4036275	4036934	.	-	.	ID=gene-PHA55_RS19670;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=PHA55_RS19670;old_locus_tag=PHA55_19665
NZ_CP116044.1	Protein Homology	CDS	4036275	4036934	.	-	0	ID=cds-WP_000189743.1;Parent=gene-PHA55_RS19670;Dbxref=Genbank:WP_000189743.1;Name=WP_000189743.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311812.1;locus_tag=PHA55_RS19670;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_000189743.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4036990	4037175	.	-	.	ID=gene-PHA55_RS19675;Name=PHA55_RS19675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS19675;old_locus_tag=PHA55_19670
NZ_CP116044.1	Protein Homology	CDS	4036990	4037175	.	-	0	ID=cds-WP_000545299.1;Parent=gene-PHA55_RS19675;Dbxref=Genbank:WP_000545299.1;Name=WP_000545299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001328908.1;locus_tag=PHA55_RS19675;product=hypothetical protein;protein_id=WP_000545299.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4037317	4038210	.	+	.	ID=gene-PHA55_RS19680;Name=argP;gbkey=Gene;gene=argP;gene_biotype=protein_coding;locus_tag=PHA55_RS19680;old_locus_tag=PHA55_19675
NZ_CP116044.1	Protein Homology	CDS	4037317	4038210	.	+	0	ID=cds-WP_000828351.1;Parent=gene-PHA55_RS19680;Dbxref=Genbank:WP_000828351.1;Name=WP_000828351.1;gbkey=CDS;gene=argP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311813.1;locus_tag=PHA55_RS19680;product=DNA-binding transcriptional regulator ArgP;protein_id=WP_000828351.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4038414	4040558	.	+	.	ID=gene-PHA55_RS19685;Name=scpA;gbkey=Gene;gene=scpA;gene_biotype=protein_coding;locus_tag=PHA55_RS19685;old_locus_tag=PHA55_19680
NZ_CP116044.1	Protein Homology	CDS	4038414	4040558	.	+	0	ID=cds-WP_000064238.1;Parent=gene-PHA55_RS19685;Dbxref=Genbank:WP_000064238.1;Name=WP_000064238.1;Ontology_term=GO:0004494,GO:0046872;gbkey=CDS;gene=scpA;go_function=methylmalonyl-CoA mutase activity|0004494||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417392.1;locus_tag=PHA55_RS19685;product=methylmalonyl-CoA mutase;protein_id=WP_000064238.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4040551	4041546	.	+	.	ID=gene-PHA55_RS19690;Name=meaB;gbkey=Gene;gene=meaB;gene_biotype=protein_coding;locus_tag=PHA55_RS19690;old_locus_tag=PHA55_19685
NZ_CP116044.1	Protein Homology	CDS	4040551	4041546	.	+	0	ID=cds-WP_000606517.1;Parent=gene-PHA55_RS19690;Dbxref=Genbank:WP_000606517.1;Name=WP_000606517.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=meaB;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417393.1;locus_tag=PHA55_RS19690;product=methylmalonyl Co-A mutase-associated GTPase MeaB;protein_id=WP_000606517.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4041557	4042342	.	+	.	ID=gene-PHA55_RS19695;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=PHA55_RS19695;old_locus_tag=PHA55_19690
NZ_CP116044.1	Protein Homology	CDS	4041557	4042342	.	+	0	ID=cds-WP_000122080.1;Parent=gene-PHA55_RS19695;Dbxref=Genbank:WP_000122080.1;Name=WP_000122080.1;gbkey=CDS;gene=scpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311816.2;locus_tag=PHA55_RS19695;product=methylmalonyl-CoA decarboxylase;protein_id=WP_000122080.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4042366	4043844	.	+	.	ID=gene-PHA55_RS19700;Name=scpC;gbkey=Gene;gene=scpC;gene_biotype=protein_coding;locus_tag=PHA55_RS19700;old_locus_tag=PHA55_19695
NZ_CP116044.1	Protein Homology	CDS	4042366	4043844	.	+	0	ID=cds-WP_000449941.1;Parent=gene-PHA55_RS19700;Dbxref=Genbank:WP_000449941.1;Name=WP_000449941.1;gbkey=CDS;gene=scpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311817.1;locus_tag=PHA55_RS19700;product=propionyl-CoA:succinate CoA transferase;protein_id=WP_000449941.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4043841	4044737	.	-	.	ID=gene-PHA55_RS19705;Name=ygfI;gbkey=Gene;gene=ygfI;gene_biotype=protein_coding;locus_tag=PHA55_RS19705;old_locus_tag=PHA55_19700
NZ_CP116044.1	Protein Homology	CDS	4043841	4044737	.	-	0	ID=cds-WP_000350807.1;Parent=gene-PHA55_RS19705;Dbxref=Genbank:WP_000350807.1;Name=WP_000350807.1;gbkey=CDS;gene=ygfI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417396.4;locus_tag=PHA55_RS19705;product=LysR family transcriptional regulator;protein_id=WP_000350807.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4044904	4045644	.	-	.	ID=gene-PHA55_RS19710;Name=yggE;gbkey=Gene;gene=yggE;gene_biotype=protein_coding;locus_tag=PHA55_RS19710;old_locus_tag=PHA55_19705
NZ_CP116044.1	Protein Homology	CDS	4044904	4045644	.	-	0	ID=cds-WP_000669834.1;Parent=gene-PHA55_RS19710;Dbxref=Genbank:WP_000669834.1;Name=WP_000669834.1;gbkey=CDS;gene=yggE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311820.1;locus_tag=PHA55_RS19710;product=oxidative stress defense protein;protein_id=WP_000669834.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4045737	4046372	.	-	.	ID=gene-PHA55_RS19715;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=PHA55_RS19715;old_locus_tag=PHA55_19710
NZ_CP116044.1	Protein Homology	CDS	4045737	4046372	.	-	0	ID=cds-WP_000493361.1;Parent=gene-PHA55_RS19715;Dbxref=Genbank:WP_000493361.1;Name=WP_000493361.1;Ontology_term=GO:1903826,GO:0061459,GO:0016020;gbkey=CDS;gene=argO;go_component=membrane|0016020||IEA;go_function=L-arginine transmembrane transporter activity|0061459||IEA;go_process=L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311821.1;locus_tag=PHA55_RS19715;product=arginine exporter ArgO;protein_id=WP_000493361.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4046511	4047371	.	-	.	ID=gene-PHA55_RS19720;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=PHA55_RS19720;old_locus_tag=PHA55_19715
NZ_CP116044.1	Protein Homology	CDS	4046511	4047371	.	-	0	ID=cds-WP_000389818.1;Parent=gene-PHA55_RS19720;Dbxref=Genbank:WP_000389818.1;Name=WP_000389818.1;gbkey=CDS;gene=mscS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311822.1;locus_tag=PHA55_RS19720;product=small-conductance mechanosensitive channel MscS;protein_id=WP_000389818.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	4047567	4047665	.	+	.	ID=gene-PHA55_RS19725;Name=PHA55_RS19725;end_range=4047665,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS19725;old_locus_tag=PHA55_19720;partial=true;pseudo=true;start_range=.,4047567
NZ_CP116044.1	Protein Homology	CDS	4047567	4047665	.	+	0	ID=cds-PHA55_RS19725;Parent=gene-PHA55_RS19725;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4047665,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518748.2;locus_tag=PHA55_RS19725;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4047567;transl_table=11
NZ_CP116044.1	RefSeq	gene	4047729	4048808	.	-	.	ID=gene-PHA55_RS19730;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=PHA55_RS19730;old_locus_tag=PHA55_19725
NZ_CP116044.1	Protein Homology	CDS	4047729	4048808	.	-	0	ID=cds-WP_000034372.1;Parent=gene-PHA55_RS19730;Dbxref=Genbank:WP_000034372.1;Name=WP_000034372.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=PHA55_RS19730;product=class II fructose-bisphosphate aldolase;protein_id=WP_000034372.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4049023	4050186	.	-	.	ID=gene-PHA55_RS19735;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=PHA55_RS19735;old_locus_tag=PHA55_19730
NZ_CP116044.1	Protein Homology	CDS	4049023	4050186	.	-	0	ID=cds-WP_000111269.1;Parent=gene-PHA55_RS19735;Dbxref=Genbank:WP_000111269.1;Name=WP_000111269.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761248.1;locus_tag=PHA55_RS19735;product=phosphoglycerate kinase;protein_id=WP_000111269.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4050236	4051255	.	-	.	ID=gene-PHA55_RS19740;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=PHA55_RS19740;old_locus_tag=PHA55_19735
NZ_CP116044.1	Protein Homology	CDS	4050236	4051255	.	-	0	ID=cds-WP_000218480.1;Parent=gene-PHA55_RS19740;Dbxref=Genbank:WP_000218480.1;Name=WP_000218480.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311825.1;locus_tag=PHA55_RS19740;product=erythrose-4-phosphate dehydrogenase;protein_id=WP_000218480.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4051627	4052058	.	+	.	ID=gene-PHA55_RS19745;Name=PHA55_RS19745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS19745;old_locus_tag=PHA55_19740
NZ_CP116044.1	Protein Homology	CDS	4051627	4052058	.	+	0	ID=cds-WP_000988693.1;Parent=gene-PHA55_RS19745;Dbxref=Genbank:WP_000988693.1;Name=WP_000988693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311826.1;locus_tag=PHA55_RS19745;product=DNA-binding protein;protein_id=WP_000988693.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4052081	4052659	.	+	.	ID=gene-PHA55_RS19750;Name=PHA55_RS19750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS19750;old_locus_tag=PHA55_19745
NZ_CP116044.1	Protein Homology	CDS	4052081	4052659	.	+	0	ID=cds-WP_000124317.1;Parent=gene-PHA55_RS19750;Dbxref=Genbank:WP_000124317.1;Name=WP_000124317.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311827.1;locus_tag=PHA55_RS19750;product=ECF transporter S component;protein_id=WP_000124317.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4052660	4053367	.	+	.	ID=gene-PHA55_RS19755;Name=PHA55_RS19755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS19755;old_locus_tag=PHA55_19750
NZ_CP116044.1	Protein Homology	CDS	4052660	4053367	.	+	0	ID=cds-WP_000553217.1;Parent=gene-PHA55_RS19755;Dbxref=Genbank:WP_000553217.1;Name=WP_000553217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311828.1;locus_tag=PHA55_RS19755;product=energy-coupling factor transporter transmembrane component T;protein_id=WP_000553217.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4053355	4054032	.	+	.	ID=gene-PHA55_RS19760;Name=PHA55_RS19760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS19760;old_locus_tag=PHA55_19755
NZ_CP116044.1	Protein Homology	CDS	4053355	4054032	.	+	0	ID=cds-WP_000256969.1;Parent=gene-PHA55_RS19760;Dbxref=Genbank:WP_000256969.1;Name=WP_000256969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311829.1;locus_tag=PHA55_RS19760;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WP_000256969.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4054026	4054703	.	+	.	ID=gene-PHA55_RS19765;Name=PHA55_RS19765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS19765;old_locus_tag=PHA55_19760
NZ_CP116044.1	Protein Homology	CDS	4054026	4054703	.	+	0	ID=cds-WP_000956871.1;Parent=gene-PHA55_RS19765;Dbxref=Genbank:WP_000956871.1;Name=WP_000956871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708691.2;locus_tag=PHA55_RS19765;product=sulfate/molybdate ABC transporter ATP-binding protein;protein_id=WP_000956871.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4054675	4055388	.	-	.	ID=gene-PHA55_RS19770;Name=PHA55_RS19770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS19770;old_locus_tag=PHA55_19765
NZ_CP116044.1	Protein Homology	CDS	4054675	4055388	.	-	0	ID=cds-WP_000687766.1;Parent=gene-PHA55_RS19770;Dbxref=Genbank:WP_000687766.1;Name=WP_000687766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708692.1;locus_tag=PHA55_RS19770;product=nucleoside/nucleotide kinase family protein;protein_id=WP_000687766.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4055385	4055894	.	-	.	ID=gene-PHA55_RS19775;Name=fumE;gbkey=Gene;gene=fumE;gene_biotype=protein_coding;locus_tag=PHA55_RS19775;old_locus_tag=PHA55_19770
NZ_CP116044.1	Protein Homology	CDS	4055385	4055894	.	-	0	ID=cds-WP_000224138.1;Parent=gene-PHA55_RS19775;Dbxref=Genbank:WP_000224138.1;Name=WP_000224138.1;gbkey=CDS;gene=fumE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708693.1;locus_tag=PHA55_RS19775;product=fumarase E;protein_id=WP_000224138.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4055916	4056881	.	-	.	ID=gene-PHA55_RS19780;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=PHA55_RS19780;old_locus_tag=PHA55_19775
NZ_CP116044.1	Protein Homology	CDS	4055916	4056881	.	-	0	ID=cds-WP_000987277.1;Parent=gene-PHA55_RS19780;Dbxref=Genbank:WP_000987277.1;Name=WP_000987277.1;Ontology_term=GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417405.1;locus_tag=PHA55_RS19780;product=class II fructose-bisphosphatase;protein_id=WP_000987277.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4056878	4058155	.	-	.	ID=gene-PHA55_RS19785;Name=yggP;gbkey=Gene;gene=yggP;gene_biotype=protein_coding;locus_tag=PHA55_RS19785;old_locus_tag=PHA55_19780
NZ_CP116044.1	Protein Homology	CDS	4056878	4058155	.	-	0	ID=cds-WP_000853221.1;Parent=gene-PHA55_RS19785;Dbxref=Genbank:WP_000853221.1;Name=WP_000853221.1;gbkey=CDS;gene=yggP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311834.1;locus_tag=PHA55_RS19785;product=zinc-binding dehydrogenase;protein_id=WP_000853221.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4058170	4059558	.	-	.	ID=gene-PHA55_RS19790;Name=cmtA;gbkey=Gene;gene=cmtA;gene_biotype=protein_coding;locus_tag=PHA55_RS19790;old_locus_tag=PHA55_19785
NZ_CP116044.1	Protein Homology	CDS	4058170	4059558	.	-	0	ID=cds-WP_000428805.1;Parent=gene-PHA55_RS19790;Dbxref=Genbank:WP_000428805.1;Name=WP_000428805.1;gbkey=CDS;gene=cmtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311835.1;locus_tag=PHA55_RS19790;product=PTS mannitol transporter subunit IICB;protein_id=WP_000428805.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4059586	4060029	.	-	.	ID=gene-PHA55_RS19795;Name=cmtB;gbkey=Gene;gene=cmtB;gene_biotype=protein_coding;locus_tag=PHA55_RS19795;old_locus_tag=PHA55_19790
NZ_CP116044.1	Protein Homology	CDS	4059586	4060029	.	-	0	ID=cds-WP_001239650.1;Parent=gene-PHA55_RS19795;Dbxref=Genbank:WP_001239650.1;Name=WP_001239650.1;gbkey=CDS;gene=cmtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311836.1;locus_tag=PHA55_RS19795;product=PTS mannitol transporter subunit IIA;protein_id=WP_001239650.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4060343	4062334	.	-	.	ID=gene-PHA55_RS19800;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=PHA55_RS19800;old_locus_tag=PHA55_19795
NZ_CP116044.1	Protein Homology	CDS	4060343	4062334	.	-	0	ID=cds-WP_000098614.1;Parent=gene-PHA55_RS19800;Dbxref=Genbank:WP_000098614.1;Name=WP_000098614.1;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026188.1;locus_tag=PHA55_RS19800;product=transketolase;protein_id=WP_000098614.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4062612	4063370	.	+	.	ID=gene-PHA55_RS19805;Name=loiP;gbkey=Gene;gene=loiP;gene_biotype=protein_coding;gene_synonym=yggG;locus_tag=PHA55_RS19805;old_locus_tag=PHA55_19800
NZ_CP116044.1	Protein Homology	CDS	4062612	4063370	.	+	0	ID=cds-WP_000701841.1;Parent=gene-PHA55_RS19805;Dbxref=Genbank:WP_000701841.1;Name=WP_000701841.1;gbkey=CDS;gene=loiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311838.2;locus_tag=PHA55_RS19805;product=metalloprotease LoiP;protein_id=WP_000701841.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4063576	4064496	.	-	.	ID=gene-PHA55_RS19810;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=PHA55_RS19810;old_locus_tag=PHA55_19805
NZ_CP116044.1	Protein Homology	CDS	4063576	4064496	.	-	0	ID=cds-WP_000105559.1;Parent=gene-PHA55_RS19810;Dbxref=Genbank:WP_000105559.1;Name=WP_000105559.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311839.1;locus_tag=PHA55_RS19810;product=agmatinase;protein_id=WP_000105559.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4064632	4065363	.	-	.	ID=gene-PHA55_RS19815;Name=PHA55_RS19815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS19815;old_locus_tag=PHA55_19810
NZ_CP116044.1	Protein Homology	CDS	4064632	4065363	.	-	0	ID=cds-WP_000758915.1;Parent=gene-PHA55_RS19815;Dbxref=Genbank:WP_000758915.1;Name=WP_000758915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311840.1;locus_tag=PHA55_RS19815;product=hypothetical protein;protein_id=WP_000758915.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4065509	4067485	.	-	.	ID=gene-PHA55_RS19820;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=PHA55_RS19820;old_locus_tag=PHA55_19815
NZ_CP116044.1	Protein Homology	CDS	4065509	4067485	.	-	0	ID=cds-WP_001295380.1;Parent=gene-PHA55_RS19820;Dbxref=Genbank:WP_001295380.1;Name=WP_001295380.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311841.1;locus_tag=PHA55_RS19820;product=biosynthetic arginine decarboxylase;protein_id=WP_001295380.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4067494	4067625	.	-	.	ID=gene-PHA55_RS19825;Name=yqgB;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;locus_tag=PHA55_RS19825;old_locus_tag=PHA55_19820
NZ_CP116044.1	Protein Homology	CDS	4067494	4067625	.	-	0	ID=cds-WP_001297406.1;Parent=gene-PHA55_RS19825;Dbxref=Genbank:WP_001297406.1;Name=WP_001297406.1;gbkey=CDS;gene=yqgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417414.2;locus_tag=PHA55_RS19825;product=acid stress response protein YqgB;protein_id=WP_001297406.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4067719	4067862	.	-	.	ID=gene-PHA55_RS19830;Name=yqgG;gbkey=Gene;gene=yqgG;gene_biotype=protein_coding;locus_tag=PHA55_RS19830;old_locus_tag=PHA55_19825
NZ_CP116044.1	Protein Homology	CDS	4067719	4067862	.	-	0	ID=cds-WP_001297404.1;Parent=gene-PHA55_RS19830;Dbxref=Genbank:WP_001297404.1;Name=WP_001297404.1;gbkey=CDS;gene=yqgG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051195.1;locus_tag=PHA55_RS19830;product=protein YqgG;protein_id=WP_001297404.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4067973	4068224	.	-	.	ID=gene-PHA55_RS19835;Name=yqgD;gbkey=Gene;gene=yqgD;gene_biotype=protein_coding;locus_tag=PHA55_RS19835;old_locus_tag=PHA55_19830
NZ_CP116044.1	Protein Homology	CDS	4067973	4068224	.	-	0	ID=cds-WP_001303651.1;Parent=gene-PHA55_RS19835;Dbxref=Genbank:WP_001303651.1;Name=WP_001303651.1;gbkey=CDS;gene=yqgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518814.1;locus_tag=PHA55_RS19835;product=protein YqgD;protein_id=WP_001303651.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4068280	4069434	.	+	.	ID=gene-PHA55_RS19840;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=PHA55_RS19840;old_locus_tag=PHA55_19835
NZ_CP116044.1	Protein Homology	CDS	4068280	4069434	.	+	0	ID=cds-WP_001062128.1;Parent=gene-PHA55_RS19840;Dbxref=Genbank:WP_001062128.1;Name=WP_001062128.1;Ontology_term=GO:0006556,GO:0004478;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=PHA55_RS19840;product=methionine adenosyltransferase;protein_id=WP_001062128.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4069870	4071264	.	+	.	ID=gene-PHA55_RS19845;Name=galP;gbkey=Gene;gene=galP;gene_biotype=protein_coding;locus_tag=PHA55_RS19845;old_locus_tag=PHA55_19840
NZ_CP116044.1	Protein Homology	CDS	4069870	4071264	.	+	0	ID=cds-WP_001112301.1;Parent=gene-PHA55_RS19845;Dbxref=Genbank:WP_001112301.1;Name=WP_001112301.1;gbkey=CDS;gene=galP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417418.1;locus_tag=PHA55_RS19845;product=galactose/proton symporter;protein_id=WP_001112301.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4071341	4071838	.	+	.	ID=gene-PHA55_RS19850;Name=yggI;gbkey=Gene;gene=yggI;gene_biotype=protein_coding;locus_tag=PHA55_RS19850;old_locus_tag=PHA55_19845
NZ_CP116044.1	Protein Homology	CDS	4071341	4071838	.	+	0	ID=cds-WP_000858396.1;Parent=gene-PHA55_RS19850;Dbxref=Genbank:WP_000858396.1;Name=WP_000858396.1;gbkey=CDS;gene=yggI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417419.1;locus_tag=PHA55_RS19850;product=SprT family zinc-dependent metalloprotease;protein_id=WP_000858396.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4071933	4072640	.	+	.	ID=gene-PHA55_RS19855;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=PHA55_RS19855;old_locus_tag=PHA55_19850
NZ_CP116044.1	Protein Homology	CDS	4071933	4072640	.	+	0	ID=cds-WP_000286500.1;Parent=gene-PHA55_RS19855;Dbxref=Genbank:WP_000286500.1;Name=WP_000286500.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417420.1;locus_tag=PHA55_RS19855;product=deoxyribonuclease I;protein_id=WP_000286500.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4072720	4073451	.	+	.	ID=gene-PHA55_RS19860;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=PHA55_RS19860;old_locus_tag=PHA55_19855
NZ_CP116044.1	Protein Homology	CDS	4072720	4073451	.	+	0	ID=cds-WP_001222508.1;Parent=gene-PHA55_RS19860;Dbxref=Genbank:WP_001222508.1;Name=WP_001222508.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=PHA55_RS19860;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_001222508.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4073464	4074414	.	+	.	ID=gene-PHA55_RS19865;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=PHA55_RS19865;old_locus_tag=PHA55_19860
NZ_CP116044.1	Protein Homology	CDS	4073464	4074414	.	+	0	ID=cds-WP_000593273.1;Parent=gene-PHA55_RS19865;Dbxref=Genbank:WP_000593273.1;Name=WP_000593273.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417422.1;locus_tag=PHA55_RS19865;product=glutathione synthase;protein_id=WP_000593273.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4074523	4075086	.	+	.	ID=gene-PHA55_RS19870;Name=yqgE;gbkey=Gene;gene=yqgE;gene_biotype=protein_coding;locus_tag=PHA55_RS19870;old_locus_tag=PHA55_19865
NZ_CP116044.1	Protein Homology	CDS	4074523	4075086	.	+	0	ID=cds-WP_001053178.1;Parent=gene-PHA55_RS19870;Dbxref=Genbank:WP_001053178.1;Name=WP_001053178.1;gbkey=CDS;gene=yqgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417423.4;locus_tag=PHA55_RS19870;product=YqgE/AlgH family protein;protein_id=WP_001053178.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4075086	4075502	.	+	.	ID=gene-PHA55_RS19875;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=PHA55_RS19875;old_locus_tag=PHA55_19870
NZ_CP116044.1	Protein Homology	CDS	4075086	4075502	.	+	0	ID=cds-WP_000017106.1;Parent=gene-PHA55_RS19875;Dbxref=Genbank:WP_000017106.1;Name=WP_000017106.1;Ontology_term=GO:0008150,GO:0003674,GO:0005737;gbkey=CDS;gene=ruvX;go_component=cytoplasm|0005737||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417424.1;locus_tag=PHA55_RS19875;product=Holliday junction resolvase RuvX;protein_id=WP_000017106.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4075750	4076730	.	-	.	ID=gene-PHA55_RS19880;Name=PHA55_RS19880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS19880;old_locus_tag=PHA55_19875
NZ_CP116044.1	Protein Homology	CDS	4075750	4076730	.	-	0	ID=cds-WP_000399648.1-10;Parent=gene-PHA55_RS19880;Dbxref=Genbank:WP_000399648.1;Name=WP_000399648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904434.1;locus_tag=PHA55_RS19880;product=IS110-like element IS621 family transposase;protein_id=WP_000399648.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4076957	4077937	.	-	.	ID=gene-PHA55_RS19885;Name=yggR;gbkey=Gene;gene=yggR;gene_biotype=protein_coding;locus_tag=PHA55_RS19885;old_locus_tag=PHA55_19880
NZ_CP116044.1	Protein Homology	CDS	4076957	4077937	.	-	0	ID=cds-WP_001349546.1;Parent=gene-PHA55_RS19885;Dbxref=Genbank:WP_001349546.1;Name=WP_001349546.1;gbkey=CDS;gene=yggR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417425.2;locus_tag=PHA55_RS19885;product=type IV pilus twitching motility protein PilT;protein_id=WP_001349546.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4077955	4078659	.	+	.	ID=gene-PHA55_RS19890;Name=yggS;gbkey=Gene;gene=yggS;gene_biotype=protein_coding;locus_tag=PHA55_RS19890;old_locus_tag=PHA55_19885
NZ_CP116044.1	Protein Homology	CDS	4077955	4078659	.	+	0	ID=cds-WP_000997795.1;Parent=gene-PHA55_RS19890;Dbxref=Genbank:WP_000997795.1;Name=WP_000997795.1;gbkey=CDS;gene=yggS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417426.1;locus_tag=PHA55_RS19890;product=pyridoxal phosphate homeostasis protein;protein_id=WP_000997795.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4078677	4079243	.	+	.	ID=gene-PHA55_RS19895;Name=yggT;gbkey=Gene;gene=yggT;gene_biotype=protein_coding;locus_tag=PHA55_RS19895;old_locus_tag=PHA55_19890
NZ_CP116044.1	Protein Homology	CDS	4078677	4079243	.	+	0	ID=cds-WP_001094831.1;Parent=gene-PHA55_RS19895;Dbxref=Genbank:WP_001094831.1;Name=WP_001094831.1;gbkey=CDS;gene=yggT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311855.1;locus_tag=PHA55_RS19895;product=osmotic shock tolerance protein YggT;protein_id=WP_001094831.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4079240	4079530	.	+	.	ID=gene-PHA55_RS19900;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=PHA55_RS19900;old_locus_tag=PHA55_19895
NZ_CP116044.1	Protein Homology	CDS	4079240	4079530	.	+	0	ID=cds-WP_001277222.1;Parent=gene-PHA55_RS19900;Dbxref=Genbank:WP_001277222.1;Name=WP_001277222.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417428.2;locus_tag=PHA55_RS19900;product=DUF167 family protein YggU;protein_id=WP_001277222.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4079538	4080131	.	+	.	ID=gene-PHA55_RS19905;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=PHA55_RS19905;old_locus_tag=PHA55_19900
NZ_CP116044.1	Protein Homology	CDS	4079538	4080131	.	+	0	ID=cds-WP_001174745.1;Parent=gene-PHA55_RS19905;Dbxref=Genbank:WP_001174745.1;Name=WP_001174745.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;gene=rdgB;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311857.1;locus_tag=PHA55_RS19905;product=RdgB/HAM1 family non-canonical purine NTP pyrophosphatase;protein_id=WP_001174745.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4080124	4081260	.	+	.	ID=gene-PHA55_RS19910;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=PHA55_RS19910;old_locus_tag=PHA55_19905
NZ_CP116044.1	Protein Homology	CDS	4080124	4081260	.	+	0	ID=cds-WP_000239917.1;Parent=gene-PHA55_RS19910;Dbxref=Genbank:WP_000239917.1;Name=WP_000239917.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemW;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708720.1;locus_tag=PHA55_RS19910;product=radical SAM family heme chaperone HemW;protein_id=WP_000239917.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4081578	4082564	.	+	.	ID=gene-PHA55_RS19915;Name=PHA55_RS19915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS19915;old_locus_tag=PHA55_19910
NZ_CP116044.1	Protein Homology	CDS	4081578	4082564	.	+	0	ID=cds-WP_000784005.1;Parent=gene-PHA55_RS19915;Dbxref=Genbank:WP_000784005.1;Name=WP_000784005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016231167.1;locus_tag=PHA55_RS19915;product=TRAP transporter substrate-binding protein;protein_id=WP_000784005.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4082609	4083112	.	+	.	ID=gene-PHA55_RS19920;Name=PHA55_RS19920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS19920;old_locus_tag=PHA55_19915
NZ_CP116044.1	Protein Homology	CDS	4082609	4083112	.	+	0	ID=cds-WP_000577033.1;Parent=gene-PHA55_RS19920;Dbxref=Genbank:WP_000577033.1;Name=WP_000577033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708723.2;locus_tag=PHA55_RS19920;product=TRAP transporter small permease;protein_id=WP_000577033.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4083112	4084413	.	+	.	ID=gene-PHA55_RS19925;Name=PHA55_RS19925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS19925;old_locus_tag=PHA55_19920
NZ_CP116044.1	Protein Homology	CDS	4083112	4084413	.	+	0	ID=cds-WP_000378946.1;Parent=gene-PHA55_RS19925;Dbxref=Genbank:WP_000378946.1;Name=WP_000378946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708726.2;locus_tag=PHA55_RS19925;product=TRAP transporter large permease subunit;protein_id=WP_000378946.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4084469	4085476	.	-	.	ID=gene-PHA55_RS19930;Name=yggM;gbkey=Gene;gene=yggM;gene_biotype=protein_coding;locus_tag=PHA55_RS19930;old_locus_tag=PHA55_19925
NZ_CP116044.1	Protein Homology	CDS	4084469	4085476	.	-	0	ID=cds-WP_000745208.1;Parent=gene-PHA55_RS19930;Dbxref=Genbank:WP_000745208.1;Name=WP_000745208.1;gbkey=CDS;gene=yggM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417431.1;locus_tag=PHA55_RS19930;product=DUF1202 family protein;protein_id=WP_000745208.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4085593	4086639	.	-	.	ID=gene-PHA55_RS19935;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=PHA55_RS19935;old_locus_tag=PHA55_19930
NZ_CP116044.1	Protein Homology	CDS	4085593	4086639	.	-	0	ID=cds-WP_000394135.1;Parent=gene-PHA55_RS19935;Dbxref=Genbank:WP_000394135.1;Name=WP_000394135.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;gene=ansB;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708728.1;locus_tag=PHA55_RS19935;product=L-asparaginase 2;protein_id=WP_000394135.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4086815	4087534	.	-	.	ID=gene-PHA55_RS19940;Name=yggN;gbkey=Gene;gene=yggN;gene_biotype=protein_coding;locus_tag=PHA55_RS19940;old_locus_tag=PHA55_19935
NZ_CP116044.1	Protein Homology	CDS	4086815	4087534	.	-	0	ID=cds-WP_000984796.1;Parent=gene-PHA55_RS19940;Dbxref=Genbank:WP_000984796.1;Name=WP_000984796.1;gbkey=CDS;gene=yggN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311861.1;locus_tag=PHA55_RS19940;product=DUF2884 domain-containing protein;protein_id=WP_000984796.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4087718	4088044	.	-	.	ID=gene-PHA55_RS19945;Name=yggL;gbkey=Gene;gene=yggL;gene_biotype=protein_coding;locus_tag=PHA55_RS19945;old_locus_tag=PHA55_19940
NZ_CP116044.1	Protein Homology	CDS	4087718	4088044	.	-	0	ID=cds-WP_001107564.1;Parent=gene-PHA55_RS19945;Dbxref=Genbank:WP_001107564.1;Name=WP_001107564.1;gbkey=CDS;gene=yggL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417434.4;locus_tag=PHA55_RS19945;product=YggL family protein;protein_id=WP_001107564.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4088044	4088763	.	-	.	ID=gene-PHA55_RS19950;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=PHA55_RS19950;old_locus_tag=PHA55_19945
NZ_CP116044.1	Protein Homology	CDS	4088044	4088763	.	-	0	ID=cds-WP_000786885.1;Parent=gene-PHA55_RS19950;Dbxref=Genbank:WP_000786885.1;Name=WP_000786885.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine-N7-)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417435.1;locus_tag=PHA55_RS19950;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_000786885.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4088924	4089976	.	+	.	ID=gene-PHA55_RS19955;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=PHA55_RS19955;old_locus_tag=PHA55_19950
NZ_CP116044.1	Protein Homology	CDS	4088924	4089976	.	+	0	ID=cds-WP_001295382.1;Parent=gene-PHA55_RS19955;Dbxref=Genbank:WP_001295382.1;Name=WP_001295382.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311864.1;locus_tag=PHA55_RS19955;product=A/G-specific adenine glycosylase;protein_id=WP_001295382.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4090004	4090279	.	+	.	ID=gene-PHA55_RS19960;Name=yggX;gbkey=Gene;gene=yggX;gene_biotype=protein_coding;locus_tag=PHA55_RS19960;old_locus_tag=PHA55_19955
NZ_CP116044.1	Protein Homology	CDS	4090004	4090279	.	+	0	ID=cds-WP_000091700.1;Parent=gene-PHA55_RS19960;Dbxref=Genbank:WP_000091700.1;Name=WP_000091700.1;Ontology_term=GO:0005506;gbkey=CDS;gene=yggX;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311865.1;locus_tag=PHA55_RS19960;product=oxidative damage protection protein;protein_id=WP_000091700.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4090344	4091423	.	+	.	ID=gene-PHA55_RS19965;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=PHA55_RS19965;old_locus_tag=PHA55_19960
NZ_CP116044.1	Protein Homology	CDS	4090344	4091423	.	+	0	ID=cds-WP_001543143.1;Parent=gene-PHA55_RS19965;Dbxref=Genbank:WP_001543143.1;Name=WP_001543143.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417438.2;locus_tag=PHA55_RS19965;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_001543143.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4091625	4092881	.	+	.	ID=gene-PHA55_RS19970;Name=nupG;gbkey=Gene;gene=nupG;gene_biotype=protein_coding;locus_tag=PHA55_RS19970;old_locus_tag=PHA55_19965
NZ_CP116044.1	Protein Homology	CDS	4091625	4092881	.	+	0	ID=cds-WP_001049791.1;Parent=gene-PHA55_RS19970;Dbxref=Genbank:WP_001049791.1;Name=WP_001049791.1;gbkey=CDS;gene=nupG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311867.2;locus_tag=PHA55_RS19970;product=nucleoside permease NupG;protein_id=WP_001049791.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4092931	4095066	.	-	.	ID=gene-PHA55_RS19975;Name=speC;gbkey=Gene;gene=speC;gene_biotype=protein_coding;locus_tag=PHA55_RS19975;old_locus_tag=PHA55_19970
NZ_CP116044.1	Protein Homology	CDS	4092931	4095066	.	-	0	ID=cds-WP_000839812.1;Parent=gene-PHA55_RS19975;Dbxref=Genbank:WP_000839812.1;Name=WP_000839812.1;gbkey=CDS;gene=speC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311868.2;locus_tag=PHA55_RS19975;product=ornithine decarboxylase;protein_id=WP_000839812.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4095228	4095311	.	-	.	ID=gene-PHA55_RS19980;Name=PHA55_RS19980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS19980;old_locus_tag=PHA55_19975
NZ_CP116044.1	Protein Homology	CDS	4095228	4095311	.	-	0	ID=cds-WP_212734590.1;Parent=gene-PHA55_RS19980;Dbxref=Genbank:WP_212734590.1;Name=WP_212734590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051196.1;locus_tag=PHA55_RS19980;product=hypothetical protein;protein_id=WP_212734590.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4095464	4096171	.	+	.	ID=gene-PHA55_RS19985;Name=yqgA;gbkey=Gene;gene=yqgA;gene_biotype=protein_coding;locus_tag=PHA55_RS19985;old_locus_tag=PHA55_19980
NZ_CP116044.1	Protein Homology	CDS	4095464	4096171	.	+	0	ID=cds-WP_000234514.1;Parent=gene-PHA55_RS19985;Dbxref=Genbank:WP_000234514.1;Name=WP_000234514.1;gbkey=CDS;gene=yqgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417441.1;locus_tag=PHA55_RS19985;product=DUF554 domain-containing protein;protein_id=WP_000234514.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4096277	4096352	.	+	.	ID=gene-PHA55_RS19990;Name=PHA55_RS19990;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS19990;old_locus_tag=PHA55_19985
NZ_CP116044.1	tRNAscan-SE	tRNA	4096277	4096352	.	+	.	ID=rna-PHA55_RS19990;Parent=gene-PHA55_RS19990;anticodon=(pos:4096310..4096312);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS19990;product=tRNA-Phe
NZ_CP116044.1	tRNAscan-SE	exon	4096277	4096352	.	+	.	ID=exon-PHA55_RS19990-1;Parent=rna-PHA55_RS19990;anticodon=(pos:4096310..4096312);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS19990;product=tRNA-Phe
NZ_CP116044.1	RefSeq	gene	4096550	4097812	.	+	.	ID=gene-PHA55_RS19995;Name=PHA55_RS19995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS19995;old_locus_tag=PHA55_19990
NZ_CP116044.1	Protein Homology	CDS	4096550	4097812	.	+	0	ID=cds-WP_001218806.1;Parent=gene-PHA55_RS19995;Dbxref=Genbank:WP_001218806.1;Name=WP_001218806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708738.1;locus_tag=PHA55_RS19995;product=integrase arm-type DNA-binding domain-containing protein;protein_id=WP_001218806.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4098077	4099414	.	-	.	ID=gene-PHA55_RS20000;Name=PHA55_RS20000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20000;old_locus_tag=PHA55_19995
NZ_CP116044.1	Protein Homology	CDS	4098077	4099414	.	-	0	ID=cds-WP_097741791.1;Parent=gene-PHA55_RS20000;Dbxref=Genbank:WP_097741791.1;Name=WP_097741791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001608786.1;locus_tag=PHA55_RS20000;product=phosphoethanolamine transferase;protein_id=WP_097741791.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4099589	4100293	.	-	.	ID=gene-PHA55_RS20005;Name=PHA55_RS20005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20005;old_locus_tag=PHA55_20000
NZ_CP116044.1	Protein Homology	CDS	4099589	4100293	.	-	0	ID=cds-WP_241325412.1;Parent=gene-PHA55_RS20005;Dbxref=Genbank:WP_241325412.1;Name=WP_241325412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536427.1;locus_tag=PHA55_RS20005;product=outer membrane beta-barrel protein;protein_id=WP_241325412.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	4100704	4100954	.	+	.	ID=gene-PHA55_RS20010;Name=PHA55_RS20010;end_range=4100954,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS20010;old_locus_tag=PHA55_20005;partial=true;pseudo=true;start_range=.,4100704
NZ_CP116044.1	Protein Homology	CDS	4100704	4100954	.	+	0	ID=cds-PHA55_RS20010;Parent=gene-PHA55_RS20010;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;end_range=4100954,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611434.1;locus_tag=PHA55_RS20010;partial=true;product=integrase core domain-containing protein;pseudo=true;start_range=.,4100704;transl_table=11
NZ_CP116044.1	RefSeq	gene	4101436	4102728	.	+	.	ID=gene-PHA55_RS20015;Name=PHA55_RS20015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20015;old_locus_tag=PHA55_20010
NZ_CP116044.1	Protein Homology	CDS	4101436	4102728	.	+	0	ID=cds-WP_097741793.1;Parent=gene-PHA55_RS20015;Dbxref=Genbank:WP_097741793.1;Name=WP_097741793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911980.1;locus_tag=PHA55_RS20015;product=MFS transporter;protein_id=WP_097741793.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4103189	4104850	.	-	.	ID=gene-PHA55_RS20020;Name=PHA55_RS20020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20020;old_locus_tag=PHA55_20015
NZ_CP116044.1	Protein Homology	CDS	4103189	4104850	.	-	0	ID=cds-WP_097741794.1;Parent=gene-PHA55_RS20020;Dbxref=Genbank:WP_097741794.1;Name=WP_097741794.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001087987.1;locus_tag=PHA55_RS20020;product=sulfatase-like hydrolase/transferase;protein_id=WP_097741794.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4104903	4105100	.	-	.	ID=gene-PHA55_RS20025;Name=PHA55_RS20025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20025;old_locus_tag=PHA55_20020
NZ_CP116044.1	GeneMarkS-2+	CDS	4104903	4105100	.	-	0	ID=cds-WP_001238006.1;Parent=gene-PHA55_RS20025;Dbxref=Genbank:WP_001238006.1;Name=WP_001238006.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA55_RS20025;product=hypothetical protein;protein_id=WP_001238006.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4105240	4105506	.	-	.	ID=gene-PHA55_RS20030;Name=PHA55_RS20030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20030;old_locus_tag=PHA55_20025
NZ_CP116044.1	Protein Homology	CDS	4105240	4105506	.	-	0	ID=cds-WP_000766274.1;Parent=gene-PHA55_RS20030;Dbxref=Genbank:WP_000766274.1;Name=WP_000766274.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015639.2;locus_tag=PHA55_RS20030;product=YkgJ family cysteine cluster protein;protein_id=WP_000766274.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4105503	4107074	.	-	.	ID=gene-PHA55_RS20035;Name=PHA55_RS20035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20035;old_locus_tag=PHA55_20030
NZ_CP116044.1	Protein Homology	CDS	4105503	4107074	.	-	0	ID=cds-WP_001100182.1;Parent=gene-PHA55_RS20035;Dbxref=Genbank:WP_001100182.1;Name=WP_001100182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001100180.1;locus_tag=PHA55_RS20035;product=ATP--cob(I)alamin adenosyltransferase;protein_id=WP_001100182.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4107121	4108200	.	-	.	ID=gene-PHA55_RS20040;Name=PHA55_RS20040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20040;old_locus_tag=PHA55_20035
NZ_CP116044.1	Protein Homology	CDS	4107121	4108200	.	-	0	ID=cds-WP_021552164.1;Parent=gene-PHA55_RS20040;Dbxref=Genbank:WP_021552164.1;Name=WP_021552164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001558406.1;locus_tag=PHA55_RS20040;product=hypothetical protein;protein_id=WP_021552164.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4108249	4109145	.	-	.	ID=gene-PHA55_RS20045;Name=PHA55_RS20045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20045;old_locus_tag=PHA55_20040
NZ_CP116044.1	Protein Homology	CDS	4108249	4109145	.	-	0	ID=cds-WP_000228488.1;Parent=gene-PHA55_RS20045;Dbxref=Genbank:WP_000228488.1;Name=WP_000228488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000785677.1;locus_tag=PHA55_RS20045;product=WYL domain-containing protein;protein_id=WP_000228488.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4109565	4110302	.	-	.	ID=gene-PHA55_RS20050;Name=PHA55_RS20050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20050;old_locus_tag=PHA55_20045
NZ_CP116044.1	Protein Homology	CDS	4109565	4110302	.	-	0	ID=cds-WP_001398114.1;Parent=gene-PHA55_RS20050;Dbxref=Genbank:WP_001398114.1;Name=WP_001398114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001389182.1;locus_tag=PHA55_RS20050;product=outer membrane beta-barrel protein;protein_id=WP_001398114.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	4110526	4110711	.	+	.	ID=gene-PHA55_RS20055;Name=PHA55_RS20055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS20055;old_locus_tag=PHA55_20050;partial=true;pseudo=true;start_range=.,4110526
NZ_CP116044.1	Protein Homology	CDS	4110526	4110711	.	+	0	ID=cds-PHA55_RS20055;Parent=gene-PHA55_RS20055;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012421665.1;locus_tag=PHA55_RS20055;partial=true;product=integrase;pseudo=true;start_range=.,4110526;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	4110917	4111789	.	+	.	ID=gene-PHA55_RS20060;Name=PHA55_RS20060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS20060;old_locus_tag=PHA55_20055;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	4110917	4111789	.	+	0	ID=cds-PHA55_RS20060;Parent=gene-PHA55_RS20060;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465694.1;locus_tag=PHA55_RS20060;product=HNH endonuclease;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	4111995	4113606	.	+	.	ID=gene-PHA55_RS20065;Name=PHA55_RS20065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS20065;old_locus_tag=PHA55_20060;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	4111995	4113606	.	+	0	ID=cds-PHA55_RS20065;Parent=gene-PHA55_RS20065;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001368704.1;locus_tag=PHA55_RS20065;product=ISL3 family transposase;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	4114309	4115433	.	+	.	ID=gene-PHA55_RS20070;Name=PHA55_RS20070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20070;old_locus_tag=PHA55_20065
NZ_CP116044.1	Protein Homology	CDS	4114309	4115433	.	+	0	ID=cds-WP_021552170.1;Parent=gene-PHA55_RS20070;Dbxref=Genbank:WP_021552170.1;Name=WP_021552170.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012372.2;locus_tag=PHA55_RS20070;product=DNA cytosine methyltransferase;protein_id=WP_021552170.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4115390	4116892	.	+	.	ID=gene-PHA55_RS20075;Name=PHA55_RS20075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20075;old_locus_tag=PHA55_20070
NZ_CP116044.1	GeneMarkS-2+	CDS	4115390	4116892	.	+	0	ID=cds-WP_021552171.1;Parent=gene-PHA55_RS20075;Dbxref=Genbank:WP_021552171.1;Name=WP_021552171.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA55_RS20075;product=hypothetical protein;protein_id=WP_021552171.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	4117391	4117543	.	+	.	ID=gene-PHA55_RS20080;Name=PHA55_RS20080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS20080;old_locus_tag=PHA55_20075;partial=true;pseudo=true;start_range=.,4117391
NZ_CP116044.1	Protein Homology	CDS	4117391	4117543	.	+	0	ID=cds-PHA55_RS20080;Parent=gene-PHA55_RS20080;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001403205.1;locus_tag=PHA55_RS20080;partial=true;product=ATP-dependent helicase;pseudo=true;start_range=.,4117391;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	4117980	4118632	.	-	.	ID=gene-PHA55_RS20085;Name=PHA55_RS20085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS20085;old_locus_tag=PHA55_20080;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	4117980	4118632	.	-	0	ID=cds-PHA55_RS20085;Parent=gene-PHA55_RS20085;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001376509.1;locus_tag=PHA55_RS20085;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	4118653	4118922	.	-	.	ID=gene-PHA55_RS20090;Name=PHA55_RS20090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20090;old_locus_tag=PHA55_20085
NZ_CP116044.1	Protein Homology	CDS	4118653	4118922	.	-	0	ID=cds-WP_024190830.1;Parent=gene-PHA55_RS20090;Dbxref=Genbank:WP_024190830.1;Name=WP_024190830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309415.1;locus_tag=PHA55_RS20090;product=PerC family transcriptional regulator;protein_id=WP_024190830.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4119001	4119639	.	-	.	ID=gene-PHA55_RS20095;Name=PHA55_RS20095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20095;old_locus_tag=PHA55_20090
NZ_CP116044.1	Protein Homology	CDS	4119001	4119639	.	-	0	ID=cds-WP_000502848.1;Parent=gene-PHA55_RS20095;Dbxref=Genbank:WP_000502848.1;Name=WP_000502848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309414.1;locus_tag=PHA55_RS20095;product=ParB N-terminal domain-containing protein;protein_id=WP_000502848.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4119624	4120856	.	-	.	ID=gene-PHA55_RS20100;Name=PHA55_RS20100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20100;old_locus_tag=PHA55_20095
NZ_CP116044.1	Protein Homology	CDS	4119624	4120856	.	-	0	ID=cds-WP_001285511.1;Parent=gene-PHA55_RS20100;Dbxref=Genbank:WP_001285511.1;Name=WP_001285511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309413.1;locus_tag=PHA55_RS20100;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_001285511.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4121357	4124038	.	-	.	ID=gene-PHA55_RS20105;Name=PHA55_RS20105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20105;old_locus_tag=PHA55_20100
NZ_CP116044.1	Protein Homology	CDS	4121357	4124038	.	-	0	ID=cds-WP_172950831.1;Parent=gene-PHA55_RS20105;Dbxref=Genbank:WP_172950831.1;Name=WP_172950831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536548.1;locus_tag=PHA55_RS20105;product=AAA domain-containing protein;protein_id=WP_172950831.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4124633	4125157	.	-	.	ID=gene-PHA55_RS20110;Name=PHA55_RS20110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20110;old_locus_tag=PHA55_20105
NZ_CP116044.1	Protein Homology	CDS	4124633	4125157	.	-	0	ID=cds-WP_235150779.1;Parent=gene-PHA55_RS20110;Dbxref=Genbank:WP_235150779.1;Name=WP_235150779.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023902.2;locus_tag=PHA55_RS20110;product=VasL domain-containing protein;protein_id=WP_235150779.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	4125209	4125358	.	-	.	ID=gene-PHA55_RS20115;Name=PHA55_RS20115;end_range=4125358,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS20115;old_locus_tag=PHA55_20110;partial=true;pseudo=true;start_range=.,4125209
NZ_CP116044.1	Protein Homology	CDS	4125209	4125358	.	-	0	ID=cds-PHA55_RS20115;Parent=gene-PHA55_RS20115;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4125358,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309409.2;locus_tag=PHA55_RS20115;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4125209;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	4125683	4125997	.	-	.	ID=gene-PHA55_RS20120;Name=PHA55_RS20120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS20120;old_locus_tag=PHA55_20115;partial=true;pseudo=true;start_range=.,4125683
NZ_CP116044.1	Protein Homology	CDS	4125683	4125997	.	-	0	ID=cds-PHA55_RS20120;Parent=gene-PHA55_RS20120;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018516.2;locus_tag=PHA55_RS20120;partial=true;product=type VI secretion system ImpA family N-terminal domain-containing protein;pseudo=true;start_range=.,4125683;transl_table=11
NZ_CP116044.1	RefSeq	gene	4126052	4126357	.	-	.	ID=gene-PHA55_RS20125;Name=PHA55_RS20125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20125;old_locus_tag=PHA55_20120
NZ_CP116044.1	Protein Homology	CDS	4126052	4126357	.	-	0	ID=cds-WP_032157452.1;Parent=gene-PHA55_RS20125;Dbxref=Genbank:WP_032157452.1;Name=WP_032157452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001604127.1;locus_tag=PHA55_RS20125;product=hypothetical protein;protein_id=WP_032157452.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4126424	4126873	.	-	.	ID=gene-PHA55_RS20130;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=PHA55_RS20130;old_locus_tag=PHA55_20125
NZ_CP116044.1	Protein Homology	CDS	4126424	4126873	.	-	0	ID=cds-WP_021552179.1;Parent=gene-PHA55_RS20130;Dbxref=Genbank:WP_021552179.1;Name=WP_021552179.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssE;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000018100.1;locus_tag=PHA55_RS20130;product=type VI secretion system baseplate subunit TssE;protein_id=WP_021552179.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4126876	4127412	.	-	.	ID=gene-PHA55_RS20135;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=PHA55_RS20135;old_locus_tag=PHA55_20130
NZ_CP116044.1	Protein Homology	CDS	4126876	4127412	.	-	0	ID=cds-WP_021552180.1;Parent=gene-PHA55_RS20135;Dbxref=Genbank:WP_021552180.1;Name=WP_021552180.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssJ;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000974467.1;locus_tag=PHA55_RS20135;product=type VI secretion system lipoprotein TssJ;protein_id=WP_021552180.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4127393	4128493	.	-	.	ID=gene-PHA55_RS20140;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=PHA55_RS20140;old_locus_tag=PHA55_20135
NZ_CP116044.1	Protein Homology	CDS	4127393	4128493	.	-	0	ID=cds-WP_097377509.1;Parent=gene-PHA55_RS20140;Dbxref=Genbank:WP_097377509.1;Name=WP_097377509.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553786.1;locus_tag=PHA55_RS20140;product=type VI secretion system baseplate subunit TssG;protein_id=WP_097377509.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4128448	4130211	.	-	.	ID=gene-PHA55_RS20145;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=PHA55_RS20145;old_locus_tag=PHA55_20140
NZ_CP116044.1	Protein Homology	CDS	4128448	4130211	.	-	0	ID=cds-WP_021552182.1;Parent=gene-PHA55_RS20145;Dbxref=Genbank:WP_021552182.1;Name=WP_021552182.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssF;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227549.1;locus_tag=PHA55_RS20145;product=type VI secretion system baseplate subunit TssF;protein_id=WP_021552182.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4130219	4130911	.	-	.	ID=gene-PHA55_RS20150;Name=PHA55_RS20150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20150;old_locus_tag=PHA55_20145
NZ_CP116044.1	Protein Homology	CDS	4130219	4130911	.	-	0	ID=cds-WP_097741796.1;Parent=gene-PHA55_RS20150;Dbxref=Genbank:WP_097741796.1;Name=WP_097741796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000115357.1;locus_tag=PHA55_RS20150;product=type VI secretion protein;protein_id=WP_097741796.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4130913	4132511	.	-	.	ID=gene-PHA55_RS20155;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=PHA55_RS20155;old_locus_tag=PHA55_20150
NZ_CP116044.1	Protein Homology	CDS	4130913	4132511	.	-	0	ID=cds-WP_021552184.1;Parent=gene-PHA55_RS20155;Dbxref=Genbank:WP_021552184.1;Name=WP_021552184.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000179040.1;locus_tag=PHA55_RS20155;product=type VI secretion system protein TssA;protein_id=WP_021552184.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4132511	4135927	.	-	.	ID=gene-PHA55_RS20160;Name=PHA55_RS20160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20160;old_locus_tag=PHA55_20155
NZ_CP116044.1	Protein Homology	CDS	4132511	4135927	.	-	0	ID=cds-WP_097741797.1;Parent=gene-PHA55_RS20160;Dbxref=Genbank:WP_097741797.1;Name=WP_097741797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230191.1;locus_tag=PHA55_RS20160;product=ImcF-related family protein;protein_id=WP_097741797.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4135914	4137071	.	-	.	ID=gene-PHA55_RS20165;Name=PHA55_RS20165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20165;old_locus_tag=PHA55_20160
NZ_CP116044.1	Protein Homology	CDS	4135914	4137071	.	-	0	ID=cds-WP_097741798.1;Parent=gene-PHA55_RS20165;Dbxref=Genbank:WP_097741798.1;Name=WP_097741798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839082.1;locus_tag=PHA55_RS20165;product=hypothetical protein;protein_id=WP_097741798.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4137075	4137341	.	-	.	ID=gene-PHA55_RS20170;Name=PHA55_RS20170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20170;old_locus_tag=PHA55_20165
NZ_CP116044.1	Protein Homology	CDS	4137075	4137341	.	-	0	ID=cds-WP_021552187.1;Parent=gene-PHA55_RS20170;Dbxref=Genbank:WP_021552187.1;Name=WP_021552187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227552.1;locus_tag=PHA55_RS20170;product=PAAR domain-containing protein;protein_id=WP_021552187.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	4137371	4138218	.	-	.	ID=gene-PHA55_RS20175;Name=PHA55_RS20175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS20175;old_locus_tag=PHA55_20170;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	4137371	4138218	.	-	0	ID=cds-PHA55_RS20175;Parent=gene-PHA55_RS20175;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913060.1;locus_tag=PHA55_RS20175;product=SUMF1/EgtB/PvdO family nonheme iron enzyme;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	4138382	4139236	.	-	.	ID=gene-PHA55_RS20180;Name=PHA55_RS20180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20180;old_locus_tag=PHA55_20175
NZ_CP116044.1	Protein Homology	CDS	4138382	4139236	.	-	0	ID=cds-WP_097741799.1;Parent=gene-PHA55_RS20180;Dbxref=Genbank:WP_097741799.1;Name=WP_097741799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001046388.1;locus_tag=PHA55_RS20180;product=SUMF1/EgtB/PvdO family nonheme iron enzyme;protein_id=WP_097741799.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4139242	4141470	.	-	.	ID=gene-PHA55_RS20185;Name=PHA55_RS20185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20185;old_locus_tag=PHA55_20180
NZ_CP116044.1	Protein Homology	CDS	4139242	4141470	.	-	0	ID=cds-WP_097741800.1;Parent=gene-PHA55_RS20185;Dbxref=Genbank:WP_097741800.1;Name=WP_097741800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000528468.1;locus_tag=PHA55_RS20185;product=hypothetical protein;protein_id=WP_097741800.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4141515	4144013	.	-	.	ID=gene-PHA55_RS20190;Name=vgrG;gbkey=Gene;gene=vgrG;gene_biotype=protein_coding;locus_tag=PHA55_RS20190;old_locus_tag=PHA55_20185
NZ_CP116044.1	Protein Homology	CDS	4141515	4144013	.	-	0	ID=cds-WP_097741801.1;Parent=gene-PHA55_RS20190;Dbxref=Genbank:WP_097741801.1;Name=WP_097741801.1;gbkey=CDS;gene=vgrG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000059650.1;locus_tag=PHA55_RS20190;product=type VI secretion system tip protein VgrG;protein_id=WP_097741801.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4144316	4144957	.	-	.	ID=gene-PHA55_RS20195;Name=PHA55_RS20195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20195;old_locus_tag=PHA55_20190
NZ_CP116044.1	Protein Homology	CDS	4144316	4144957	.	-	0	ID=cds-WP_097741802.1;Parent=gene-PHA55_RS20195;Dbxref=Genbank:WP_097741802.1;Name=WP_097741802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000376467.1;locus_tag=PHA55_RS20195;product=hypothetical protein;protein_id=WP_097741802.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4144944	4147631	.	-	.	ID=gene-PHA55_RS20200;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;locus_tag=PHA55_RS20200;old_locus_tag=PHA55_20195
NZ_CP116044.1	Protein Homology	CDS	4144944	4147631	.	-	0	ID=cds-WP_097741803.1;Parent=gene-PHA55_RS20200;Dbxref=Genbank:WP_097741803.1;Name=WP_097741803.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000431134.1;locus_tag=PHA55_RS20200;product=type VI secretion system ATPase TssH;protein_id=WP_097741803.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4147800	4148291	.	-	.	ID=gene-PHA55_RS20205;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;locus_tag=PHA55_RS20205;old_locus_tag=PHA55_20200
NZ_CP116044.1	Protein Homology	CDS	4147800	4148291	.	-	0	ID=cds-WP_001380974.1;Parent=gene-PHA55_RS20205;Dbxref=Genbank:WP_001380974.1;Name=WP_001380974.1;gbkey=CDS;gene=hcp;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226602.1;locus_tag=PHA55_RS20205;product=type VI secretion system effector Hcp;protein_id=WP_001380974.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4148297	4150027	.	-	.	ID=gene-PHA55_RS20210;Name=PHA55_RS20210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20210;old_locus_tag=PHA55_20205
NZ_CP116044.1	Protein Homology	CDS	4148297	4150027	.	-	0	ID=cds-WP_097741804.1;Parent=gene-PHA55_RS20210;Dbxref=Genbank:WP_097741804.1;Name=WP_097741804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000558483.1;locus_tag=PHA55_RS20210;product=OmpA family protein;protein_id=WP_097741804.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4150030	4150683	.	-	.	ID=gene-PHA55_RS20215;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=PHA55_RS20215;old_locus_tag=PHA55_20210
NZ_CP116044.1	Protein Homology	CDS	4150030	4150683	.	-	0	ID=cds-WP_073521203.1;Parent=gene-PHA55_RS20215;Dbxref=Genbank:WP_073521203.1;Name=WP_073521203.1;gbkey=CDS;gene=tssL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040043.1;locus_tag=PHA55_RS20215;product=type VI secretion system protein TssL%2C short form;protein_id=WP_073521203.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4150680	4152017	.	-	.	ID=gene-PHA55_RS20220;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=PHA55_RS20220;old_locus_tag=PHA55_20215
NZ_CP116044.1	Protein Homology	CDS	4150680	4152017	.	-	0	ID=cds-WP_032175959.1;Parent=gene-PHA55_RS20220;Dbxref=Genbank:WP_032175959.1;Name=WP_032175959.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssK;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227577.1;locus_tag=PHA55_RS20220;product=type VI secretion system baseplate subunit TssK;protein_id=WP_032175959.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4152033	4153577	.	-	.	ID=gene-PHA55_RS20225;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=PHA55_RS20225;old_locus_tag=PHA55_20220
NZ_CP116044.1	Protein Homology	CDS	4152033	4153577	.	-	0	ID=cds-WP_097741805.1;Parent=gene-PHA55_RS20225;Dbxref=Genbank:WP_097741805.1;Name=WP_097741805.1;Ontology_term=GO:0033103,GO:0003674,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892320.1;locus_tag=PHA55_RS20225;product=type VI secretion system contractile sheath large subunit;protein_id=WP_097741805.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4153599	4154096	.	-	.	ID=gene-PHA55_RS20230;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=PHA55_RS20230;old_locus_tag=PHA55_20225
NZ_CP116044.1	Protein Homology	CDS	4153599	4154096	.	-	0	ID=cds-WP_089529972.1;Parent=gene-PHA55_RS20230;Dbxref=Genbank:WP_089529972.1;Name=WP_089529972.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssB;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559830.1;locus_tag=PHA55_RS20230;product=type VI secretion system contractile sheath small subunit;protein_id=WP_089529972.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4154603	4154794	.	+	.	ID=gene-PHA55_RS20235;Name=PHA55_RS20235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20235;old_locus_tag=PHA55_20230
NZ_CP116044.1	Protein Homology	CDS	4154603	4154794	.	+	0	ID=cds-WP_001287796.1;Parent=gene-PHA55_RS20235;Dbxref=Genbank:WP_001287796.1;Name=WP_001287796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502604.1;locus_tag=PHA55_RS20235;product=DUF4222 domain-containing protein;protein_id=WP_001287796.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4154847	4155080	.	-	.	ID=gene-PHA55_RS20240;Name=PHA55_RS20240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20240;old_locus_tag=PHA55_20235
NZ_CP116044.1	Protein Homology	CDS	4154847	4155080	.	-	0	ID=cds-WP_097741821.1;Parent=gene-PHA55_RS20240;Dbxref=Genbank:WP_097741821.1;Name=WP_097741821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309405.1;locus_tag=PHA55_RS20240;product=hypothetical protein;protein_id=WP_097741821.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4155176	4155799	.	-	.	ID=gene-PHA55_RS20245;Name=PHA55_RS20245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20245;old_locus_tag=PHA55_20240
NZ_CP116044.1	Protein Homology	CDS	4155176	4155799	.	-	0	ID=cds-WP_097741807.1;Parent=gene-PHA55_RS20245;Dbxref=Genbank:WP_097741807.1;Name=WP_097741807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309404.1;locus_tag=PHA55_RS20245;product=DNA-binding protein;protein_id=WP_097741807.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4155920	4156102	.	-	.	ID=gene-PHA55_RS20250;Name=PHA55_RS20250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20250;old_locus_tag=PHA55_20245
NZ_CP116044.1	Protein Homology	CDS	4155920	4156102	.	-	0	ID=cds-WP_001216313.1;Parent=gene-PHA55_RS20250;Dbxref=Genbank:WP_001216313.1;Name=WP_001216313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001424023.1;locus_tag=PHA55_RS20250;product=hypothetical protein;protein_id=WP_001216313.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4156108	4156521	.	-	.	ID=gene-PHA55_RS20255;Name=PHA55_RS20255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20255;old_locus_tag=PHA55_20250
NZ_CP116044.1	Protein Homology	CDS	4156108	4156521	.	-	0	ID=cds-WP_032255455.1;Parent=gene-PHA55_RS20255;Dbxref=Genbank:WP_032255455.1;Name=WP_032255455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737781.1;locus_tag=PHA55_RS20255;product=putative zinc ribbon protein;protein_id=WP_032255455.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4156518	4156901	.	-	.	ID=gene-PHA55_RS20260;Name=PHA55_RS20260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20260;old_locus_tag=PHA55_20255
NZ_CP116044.1	Protein Homology	CDS	4156518	4156901	.	-	0	ID=cds-WP_172950832.1;Parent=gene-PHA55_RS20260;Dbxref=Genbank:WP_172950832.1;Name=WP_172950832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708755.1;locus_tag=PHA55_RS20260;product=putative zinc ribbon protein;protein_id=WP_172950832.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4157161	4157730	.	-	.	ID=gene-PHA55_RS20265;Name=PHA55_RS20265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20265;old_locus_tag=PHA55_20260
NZ_CP116044.1	Protein Homology	CDS	4157161	4157730	.	-	0	ID=cds-WP_032255459.1;Parent=gene-PHA55_RS20265;Dbxref=Genbank:WP_032255459.1;Name=WP_032255459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000221568.1;locus_tag=PHA55_RS20265;product=inovirus Gp2 family protein;protein_id=WP_032255459.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4158197	4158409	.	-	.	ID=gene-PHA55_RS20270;Name=hha;gbkey=Gene;gene=hha;gene_biotype=protein_coding;locus_tag=PHA55_RS20270;old_locus_tag=PHA55_20265
NZ_CP116044.1	Protein Homology	CDS	4158197	4158409	.	-	0	ID=cds-WP_000453331.1;Parent=gene-PHA55_RS20270;Dbxref=Genbank:WP_000453331.1;Name=WP_000453331.1;gbkey=CDS;gene=hha;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000453335.1;locus_tag=PHA55_RS20270;product=hemolysin expression modulator Hha;protein_id=WP_000453331.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4159096	4159302	.	+	.	ID=gene-PHA55_RS20275;Name=PHA55_RS20275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20275;old_locus_tag=PHA55_20270
NZ_CP116044.1	Protein Homology	CDS	4159096	4159302	.	+	0	ID=cds-WP_001095912.1;Parent=gene-PHA55_RS20275;Dbxref=Genbank:WP_001095912.1;Name=WP_001095912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708761.1;locus_tag=PHA55_RS20275;product=AlpA family transcriptional regulator;protein_id=WP_001095912.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4159395	4159997	.	+	.	ID=gene-PHA55_RS20280;Name=PHA55_RS20280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20280;old_locus_tag=PHA55_20275
NZ_CP116044.1	Protein Homology	CDS	4159395	4159997	.	+	0	ID=cds-WP_097741810.1;Parent=gene-PHA55_RS20280;Dbxref=Genbank:WP_097741810.1;Name=WP_097741810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001590672.1;locus_tag=PHA55_RS20280;product=hypothetical protein;protein_id=WP_097741810.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4160320	4161804	.	-	.	ID=gene-PHA55_RS20285;Name=PHA55_RS20285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20285;old_locus_tag=PHA55_20280
NZ_CP116044.1	Protein Homology	CDS	4160320	4161804	.	-	0	ID=cds-WP_123056198.1;Parent=gene-PHA55_RS20285;Dbxref=Genbank:WP_123056198.1;Name=WP_123056198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001405821.1;locus_tag=PHA55_RS20285;product=YfjI family protein;protein_id=WP_123056198.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4162985	4163857	.	+	.	ID=gene-PHA55_RS20290;Name=PHA55_RS20290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20290;old_locus_tag=PHA55_20285
NZ_CP116044.1	Protein Homology	CDS	4162985	4163857	.	+	0	ID=cds-WP_059336668.1;Parent=gene-PHA55_RS20290;Dbxref=Genbank:WP_059336668.1;Name=WP_059336668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309422.1;locus_tag=PHA55_RS20290;product=GTPase family protein;protein_id=WP_059336668.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4164230	4167076	.	+	.	ID=gene-PHA55_RS20295;Name=PHA55_RS20295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20295;old_locus_tag=PHA55_20290
NZ_CP116044.1	Protein Homology	CDS	4164230	4167076	.	+	0	ID=cds-WP_271287474.1;Parent=gene-PHA55_RS20295;Dbxref=Genbank:WP_271287474.1;Name=WP_271287474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309423.1;locus_tag=PHA55_RS20295;product=Ag43/Cah family autotransporter adhesin;protein_id=WP_271287474.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4167403	4168221	.	+	.	ID=gene-PHA55_RS20300;Name=PHA55_RS20300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20300;old_locus_tag=PHA55_20295
NZ_CP116044.1	Protein Homology	CDS	4167403	4168221	.	+	0	ID=cds-WP_097741813.1;Parent=gene-PHA55_RS20300;Dbxref=Genbank:WP_097741813.1;Name=WP_097741813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708768.1;locus_tag=PHA55_RS20300;product=DUF932 domain-containing protein;protein_id=WP_097741813.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4168221	4168466	.	+	.	ID=gene-PHA55_RS20305;Name=PHA55_RS20305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20305;old_locus_tag=PHA55_20300
NZ_CP116044.1	GeneMarkS-2+	CDS	4168221	4168466	.	+	0	ID=cds-WP_097741814.1;Parent=gene-PHA55_RS20305;Dbxref=Genbank:WP_097741814.1;Name=WP_097741814.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA55_RS20305;product=antirestriction protein;protein_id=WP_097741814.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4168560	4169033	.	+	.	ID=gene-PHA55_RS20310;Name=PHA55_RS20310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20310;old_locus_tag=PHA55_20305
NZ_CP116044.1	Protein Homology	CDS	4168560	4169033	.	+	0	ID=cds-WP_097741815.1;Parent=gene-PHA55_RS20310;Dbxref=Genbank:WP_097741815.1;Name=WP_097741815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708769.2;locus_tag=PHA55_RS20310;product=antirestriction protein;protein_id=WP_097741815.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4169049	4169525	.	+	.	ID=gene-PHA55_RS20315;Name=yeeS;gbkey=Gene;gene=yeeS;gene_biotype=protein_coding;locus_tag=PHA55_RS20315;old_locus_tag=PHA55_20310
NZ_CP116044.1	Protein Homology	CDS	4169049	4169525	.	+	0	ID=cds-WP_001186774.1;Parent=gene-PHA55_RS20315;Dbxref=Genbank:WP_001186774.1;Name=WP_001186774.1;gbkey=CDS;gene=yeeS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310830.1;locus_tag=PHA55_RS20315;product=RadC family protein;protein_id=WP_001186774.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4169594	4169815	.	+	.	ID=gene-PHA55_RS20320;Name=yeeT;gbkey=Gene;gene=yeeT;gene_biotype=protein_coding;locus_tag=PHA55_RS20320;old_locus_tag=PHA55_20315
NZ_CP116044.1	Protein Homology	CDS	4169594	4169815	.	+	0	ID=cds-WP_000692300.1;Parent=gene-PHA55_RS20320;Dbxref=Genbank:WP_000692300.1;Name=WP_000692300.1;gbkey=CDS;gene=yeeT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309431.1;locus_tag=PHA55_RS20320;product=DUF987 domain-containing protein;protein_id=WP_000692300.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4169834	4170478	.	+	.	ID=gene-PHA55_RS20325;Name=PHA55_RS20325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20325;old_locus_tag=PHA55_20320
NZ_CP116044.1	Protein Homology	CDS	4169834	4170478	.	+	0	ID=cds-WP_097296686.1;Parent=gene-PHA55_RS20325;Dbxref=Genbank:WP_097296686.1;Name=WP_097296686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000086751.1;locus_tag=PHA55_RS20325;product=antitoxin of toxin-antitoxin stability system;protein_id=WP_097296686.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4170494	4170862	.	+	.	ID=gene-PHA55_RS20330;Name=cbeA;gbkey=Gene;gene=cbeA;gene_biotype=protein_coding;locus_tag=PHA55_RS20330;old_locus_tag=PHA55_20325
NZ_CP116044.1	Protein Homology	CDS	4170494	4170862	.	+	0	ID=cds-WP_061330307.1;Parent=gene-PHA55_RS20330;Dbxref=Genbank:WP_061330307.1;Name=WP_061330307.1;gbkey=CDS;gene=cbeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310832.1;locus_tag=PHA55_RS20330;product=type IV toxin-antitoxin system YeeU family antitoxin;protein_id=WP_061330307.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4170952	4171329	.	+	.	ID=gene-PHA55_RS20335;Name=PHA55_RS20335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20335;old_locus_tag=PHA55_20330
NZ_CP116044.1	Protein Homology	CDS	4170952	4171329	.	+	0	ID=cds-WP_097741816.1;Parent=gene-PHA55_RS20335;Dbxref=Genbank:WP_097741816.1;Name=WP_097741816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001683029.1;locus_tag=PHA55_RS20335;product=TA system toxin CbtA family protein;protein_id=WP_097741816.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4171326	4171814	.	+	.	ID=gene-PHA55_RS20340;Name=PHA55_RS20340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20340;old_locus_tag=PHA55_20335
NZ_CP116044.1	Protein Homology	CDS	4171326	4171814	.	+	0	ID=cds-WP_000761672.1;Parent=gene-PHA55_RS20340;Dbxref=Genbank:WP_000761672.1;Name=WP_000761672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708774.1;locus_tag=PHA55_RS20340;product=DUF5983 family protein;protein_id=WP_000761672.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4171826	4172023	.	+	.	ID=gene-PHA55_RS20345;Name=PHA55_RS20345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20345;old_locus_tag=PHA55_20340
NZ_CP116044.1	Protein Homology	CDS	4171826	4172023	.	+	0	ID=cds-WP_001546507.1;Parent=gene-PHA55_RS20345;Dbxref=Genbank:WP_001546507.1;Name=WP_001546507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309435.1;locus_tag=PHA55_RS20345;product=DUF957 domain-containing protein;protein_id=WP_001546507.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4172108	4172953	.	+	.	ID=gene-PHA55_RS20350;Name=PHA55_RS20350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20350;old_locus_tag=PHA55_20345
NZ_CP116044.1	Protein Homology	CDS	4172108	4172953	.	+	0	ID=cds-WP_097741817.1;Parent=gene-PHA55_RS20350;Dbxref=Genbank:WP_097741817.1;Name=WP_097741817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001564112.1;locus_tag=PHA55_RS20350;product=DUF4942 domain-containing protein;protein_id=WP_097741817.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4173024	4174559	.	+	.	ID=gene-PHA55_RS20355;Name=PHA55_RS20355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20355;old_locus_tag=PHA55_20350
NZ_CP116044.1	Protein Homology	CDS	4173024	4174559	.	+	0	ID=cds-WP_097741818.1;Parent=gene-PHA55_RS20355;Dbxref=Genbank:WP_097741818.1;Name=WP_097741818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000492886.1;locus_tag=PHA55_RS20355;product=EAL domain-containing protein;protein_id=WP_097741818.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4174894	4175430	.	-	.	ID=gene-PHA55_RS20360;Name=yghD;gbkey=Gene;gene=yghD;gene_biotype=protein_coding;locus_tag=PHA55_RS20360;old_locus_tag=PHA55_20355
NZ_CP116044.1	Protein Homology	CDS	4174894	4175430	.	-	0	ID=cds-WP_001543144.1;Parent=gene-PHA55_RS20360;Dbxref=Genbank:WP_001543144.1;Name=WP_001543144.1;gbkey=CDS;gene=yghD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417442.1;locus_tag=PHA55_RS20360;product=GspM family type II secretion system protein YghD;protein_id=WP_001543144.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4175432	4176610	.	-	.	ID=gene-PHA55_RS20365;Name=gspL;gbkey=Gene;gene=gspL;gene_biotype=protein_coding;locus_tag=PHA55_RS20365;old_locus_tag=PHA55_20360
NZ_CP116044.1	Protein Homology	CDS	4175432	4176610	.	-	0	ID=cds-WP_000094974.1;Parent=gene-PHA55_RS20365;Dbxref=Genbank:WP_000094974.1;Name=WP_000094974.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspL;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000097227.1;locus_tag=PHA55_RS20365;product=type II secretion system protein GspL;protein_id=WP_000094974.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4176607	4177584	.	-	.	ID=gene-PHA55_RS20370;Name=gspK;gbkey=Gene;gene=gspK;gene_biotype=protein_coding;locus_tag=PHA55_RS20370;old_locus_tag=PHA55_20365
NZ_CP116044.1	Protein Homology	CDS	4176607	4177584	.	-	0	ID=cds-WP_000633238.1;Parent=gene-PHA55_RS20370;Dbxref=Genbank:WP_000633238.1;Name=WP_000633238.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=gspK;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001554494.1;locus_tag=PHA55_RS20370;product=type II secretion system minor pseudopilin GspK;protein_id=WP_000633238.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4177587	4178186	.	-	.	ID=gene-PHA55_RS20375;Name=gspJ;gbkey=Gene;gene=gspJ;gene_biotype=protein_coding;locus_tag=PHA55_RS20375;old_locus_tag=PHA55_20370
NZ_CP116044.1	Protein Homology	CDS	4177587	4178186	.	-	0	ID=cds-WP_001255040.1;Parent=gene-PHA55_RS20375;Dbxref=Genbank:WP_001255040.1;Name=WP_001255040.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspJ;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001691118.1;locus_tag=PHA55_RS20375;product=type II secretion system minor pseudopilin GspJ;protein_id=WP_001255040.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4178183	4178554	.	-	.	ID=gene-PHA55_RS20380;Name=gspI;gbkey=Gene;gene=gspI;gene_biotype=protein_coding;locus_tag=PHA55_RS20380;old_locus_tag=PHA55_20375
NZ_CP116044.1	Protein Homology	CDS	4178183	4178554	.	-	0	ID=cds-WP_000820125.1;Parent=gene-PHA55_RS20380;Dbxref=Genbank:WP_000820125.1;Name=WP_000820125.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspI;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001709020.1;locus_tag=PHA55_RS20380;product=type II secretion system minor pseudopilin GspI;protein_id=WP_000820125.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4178551	4179114	.	-	.	ID=gene-PHA55_RS20385;Name=gspH;gbkey=Gene;gene=gspH;gene_biotype=protein_coding;locus_tag=PHA55_RS20385;old_locus_tag=PHA55_20380
NZ_CP116044.1	Protein Homology	CDS	4178551	4179114	.	-	0	ID=cds-WP_001115140.1;Parent=gene-PHA55_RS20385;Dbxref=Genbank:WP_001115140.1;Name=WP_001115140.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspH;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001394829.1;locus_tag=PHA55_RS20385;product=type II secretion system minor pseudopilin GspH;protein_id=WP_001115140.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4179118	4179573	.	-	.	ID=gene-PHA55_RS20390;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;locus_tag=PHA55_RS20390;old_locus_tag=PHA55_20385
NZ_CP116044.1	Protein Homology	CDS	4179118	4179573	.	-	0	ID=cds-WP_001087296.1;Parent=gene-PHA55_RS20390;Dbxref=Genbank:WP_001087296.1;Name=WP_001087296.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspG;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912123.1;locus_tag=PHA55_RS20390;product=type II secretion system major pseudopilin GspG;protein_id=WP_001087296.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4179590	4180813	.	-	.	ID=gene-PHA55_RS20395;Name=gspF;gbkey=Gene;gene=gspF;gene_biotype=protein_coding;locus_tag=PHA55_RS20395;old_locus_tag=PHA55_20390
NZ_CP116044.1	Protein Homology	CDS	4179590	4180813	.	-	0	ID=cds-WP_001173453.1;Parent=gene-PHA55_RS20395;Dbxref=Genbank:WP_001173453.1;Name=WP_001173453.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspF;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001173399.1;locus_tag=PHA55_RS20395;product=type II secretion system inner membrane protein GspF;protein_id=WP_001173453.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4180813	4182306	.	-	.	ID=gene-PHA55_RS20400;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=PHA55_RS20400;old_locus_tag=PHA55_20395
NZ_CP116044.1	Protein Homology	CDS	4180813	4182306	.	-	0	ID=cds-WP_000249348.1;Parent=gene-PHA55_RS20400;Dbxref=Genbank:WP_000249348.1;Name=WP_000249348.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspE;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525635.1;locus_tag=PHA55_RS20400;product=type II secretion system ATPase GspE;protein_id=WP_000249348.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4182306	4184366	.	-	.	ID=gene-PHA55_RS20405;Name=gspD;gbkey=Gene;gene=gspD;gene_biotype=protein_coding;locus_tag=PHA55_RS20405;old_locus_tag=PHA55_20400
NZ_CP116044.1	Protein Homology	CDS	4182306	4184366	.	-	0	ID=cds-WP_000498829.1;Parent=gene-PHA55_RS20405;Dbxref=Genbank:WP_000498829.1;Name=WP_000498829.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspD;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020234996.1;locus_tag=PHA55_RS20405;product=type II secretion system secretin GspD;protein_id=WP_000498829.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4184396	4185355	.	-	.	ID=gene-PHA55_RS20410;Name=gspC;gbkey=Gene;gene=gspC;gene_biotype=protein_coding;locus_tag=PHA55_RS20410;old_locus_tag=PHA55_20405
NZ_CP116044.1	Protein Homology	CDS	4184396	4185355	.	-	0	ID=cds-WP_000135063.1;Parent=gene-PHA55_RS20410;Dbxref=Genbank:WP_000135063.1;Name=WP_000135063.1;gbkey=CDS;gene=gspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239656.1;locus_tag=PHA55_RS20410;product=type II secretion system protein GspC;protein_id=WP_000135063.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4185373	4185783	.	-	.	ID=gene-PHA55_RS20415;Name=gspS2;gbkey=Gene;gene=gspS2;gene_biotype=protein_coding;locus_tag=PHA55_RS20415;old_locus_tag=PHA55_20410
NZ_CP116044.1	Protein Homology	CDS	4185373	4185783	.	-	0	ID=cds-WP_001324279.1;Parent=gene-PHA55_RS20415;Dbxref=Genbank:WP_001324279.1;Name=WP_001324279.1;gbkey=CDS;gene=gspS2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417445.1;locus_tag=PHA55_RS20415;product=type II secretion system pilot lipoprotein GspS-beta;protein_id=WP_001324279.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4185849	4186658	.	-	.	ID=gene-PHA55_RS20420;Name=pppA;gbkey=Gene;gene=pppA;gene_biotype=protein_coding;locus_tag=PHA55_RS20420;old_locus_tag=PHA55_20415
NZ_CP116044.1	Protein Homology	CDS	4185849	4186658	.	-	0	ID=cds-WP_001365924.1;Parent=gene-PHA55_RS20420;Dbxref=Genbank:WP_001365924.1;Name=WP_001365924.1;gbkey=CDS;gene=pppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417446.4;locus_tag=PHA55_RS20420;product=prepilin peptidase PppA;protein_id=WP_001365924.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4186798	4191363	.	-	.	ID=gene-PHA55_RS20425;Name=sslE;gbkey=Gene;gene=sslE;gene_biotype=protein_coding;locus_tag=PHA55_RS20425;old_locus_tag=PHA55_20420
NZ_CP116044.1	Protein Homology	CDS	4186798	4191363	.	-	0	ID=cds-WP_001034497.1;Parent=gene-PHA55_RS20425;Dbxref=Genbank:WP_001034497.1;Name=WP_001034497.1;gbkey=CDS;gene=sslE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026189.1;locus_tag=PHA55_RS20425;product=lipoprotein metalloprotease SslE;protein_id=WP_001034497.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4191849	4193531	.	-	.	ID=gene-PHA55_RS20430;Name=glcA;gbkey=Gene;gene=glcA;gene_biotype=protein_coding;locus_tag=PHA55_RS20430;old_locus_tag=PHA55_20425
NZ_CP116044.1	Protein Homology	CDS	4191849	4193531	.	-	0	ID=cds-WP_000259303.1;Parent=gene-PHA55_RS20430;Dbxref=Genbank:WP_000259303.1;Name=WP_000259303.1;gbkey=CDS;gene=glcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417449.1;locus_tag=PHA55_RS20430;product=glycolate permease GlcA;protein_id=WP_000259303.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4193887	4196058	.	-	.	ID=gene-PHA55_RS20435;Name=glcB;gbkey=Gene;gene=glcB;gene_biotype=protein_coding;locus_tag=PHA55_RS20435;old_locus_tag=PHA55_20430
NZ_CP116044.1	Protein Homology	CDS	4193887	4196058	.	-	0	ID=cds-WP_000084078.1;Parent=gene-PHA55_RS20435;Dbxref=Genbank:WP_000084078.1;Name=WP_000084078.1;Ontology_term=GO:0006099,GO:0004474;gbkey=CDS;gene=glcB;go_function=malate synthase activity|0004474||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417450.1;locus_tag=PHA55_RS20435;product=malate synthase G;protein_id=WP_000084078.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4196080	4196484	.	-	.	ID=gene-PHA55_RS20440;Name=glcG;gbkey=Gene;gene=glcG;gene_biotype=protein_coding;locus_tag=PHA55_RS20440;old_locus_tag=PHA55_20435
NZ_CP116044.1	Protein Homology	CDS	4196080	4196484	.	-	0	ID=cds-WP_000853256.1;Parent=gene-PHA55_RS20440;Dbxref=Genbank:WP_000853256.1;Name=WP_000853256.1;gbkey=CDS;gene=glcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417451.1;locus_tag=PHA55_RS20440;product=GlcG family protein;protein_id=WP_000853256.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4196489	4197712	.	-	.	ID=gene-PHA55_RS20445;Name=glcF;gbkey=Gene;gene=glcF;gene_biotype=protein_coding;locus_tag=PHA55_RS20445;old_locus_tag=PHA55_20440
NZ_CP116044.1	Protein Homology	CDS	4196489	4197712	.	-	0	ID=cds-WP_001194680.1;Parent=gene-PHA55_RS20445;Dbxref=Genbank:WP_001194680.1;Name=WP_001194680.1;Ontology_term=GO:0051536;gbkey=CDS;gene=glcF;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026190.1;locus_tag=PHA55_RS20445;product=glycolate oxidase subunit GlcF;protein_id=WP_001194680.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4197723	4198775	.	-	.	ID=gene-PHA55_RS20450;Name=glcE;gbkey=Gene;gene=glcE;gene_biotype=protein_coding;locus_tag=PHA55_RS20450;old_locus_tag=PHA55_20445
NZ_CP116044.1	Protein Homology	CDS	4197723	4198775	.	-	0	ID=cds-WP_000943059.1;Parent=gene-PHA55_RS20450;Dbxref=Genbank:WP_000943059.1;Name=WP_000943059.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;gene=glcE;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026191.1;locus_tag=PHA55_RS20450;product=glycolate oxidase subunit GlcE;protein_id=WP_000943059.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4198775	4200274	.	-	.	ID=gene-PHA55_RS20455;Name=glcD;gbkey=Gene;gene=glcD;gene_biotype=protein_coding;locus_tag=PHA55_RS20455;old_locus_tag=PHA55_20450
NZ_CP116044.1	Protein Homology	CDS	4198775	4200274	.	-	0	ID=cds-WP_000026117.1;Parent=gene-PHA55_RS20455;Dbxref=Genbank:WP_000026117.1;Name=WP_000026117.1;Ontology_term=GO:0003973,GO:0071949,GO:0009339;gbkey=CDS;gene=glcD;go_component=glycolate oxidase complex|0009339||IEA;go_function=(S)-2-hydroxy-acid oxidase activity|0003973||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417453.1;locus_tag=PHA55_RS20455;product=glycolate oxidase subunit GlcD;protein_id=WP_000026117.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4200525	4201289	.	+	.	ID=gene-PHA55_RS20460;Name=glcC;gbkey=Gene;gene=glcC;gene_biotype=protein_coding;locus_tag=PHA55_RS20460;old_locus_tag=PHA55_20455
NZ_CP116044.1	Protein Homology	CDS	4200525	4201289	.	+	0	ID=cds-WP_001297764.1;Parent=gene-PHA55_RS20460;Dbxref=Genbank:WP_001297764.1;Name=WP_001297764.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=glcC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417454.1;locus_tag=PHA55_RS20460;product=transcriptional regulator GlcC;protein_id=WP_001297764.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4201296	4202438	.	-	.	ID=gene-PHA55_RS20465;Name=yghO;gbkey=Gene;gene=yghO;gene_biotype=protein_coding;locus_tag=PHA55_RS20465;old_locus_tag=PHA55_20460
NZ_CP116044.1	Protein Homology	CDS	4201296	4202438	.	-	0	ID=cds-WP_000388786.1;Parent=gene-PHA55_RS20465;Dbxref=Genbank:WP_000388786.1;Name=WP_000388786.1;gbkey=CDS;gene=yghO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001327865.1;locus_tag=PHA55_RS20465;product=protein YghO;protein_id=WP_000388786.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4202809	4204530	.	+	.	ID=gene-PHA55_RS20470;Name=PHA55_RS20470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20470;old_locus_tag=PHA55_20465
NZ_CP116044.1	Protein Homology	CDS	4202809	4204530	.	+	0	ID=cds-WP_001390306.1;Parent=gene-PHA55_RS20470;Dbxref=Genbank:WP_001390306.1;Name=WP_001390306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016241628.1;locus_tag=PHA55_RS20470;product=fatty acyl-AMP ligase;protein_id=WP_001390306.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4204527	4205441	.	+	.	ID=gene-PHA55_RS20475;Name=PHA55_RS20475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20475;old_locus_tag=PHA55_20470
NZ_CP116044.1	Protein Homology	CDS	4204527	4205441	.	+	0	ID=cds-WP_001077177.1;Parent=gene-PHA55_RS20475;Dbxref=Genbank:WP_001077177.1;Name=WP_001077177.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001481799.1;locus_tag=PHA55_RS20475;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_001077177.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4205473	4205721	.	+	.	ID=gene-PHA55_RS20480;Name=PHA55_RS20480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20480;old_locus_tag=PHA55_20475
NZ_CP116044.1	Protein Homology	CDS	4205473	4205721	.	+	0	ID=cds-WP_000248097.1;Parent=gene-PHA55_RS20480;Dbxref=Genbank:WP_000248097.1;Name=WP_000248097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708794.1;locus_tag=PHA55_RS20480;product=acyl carrier protein;protein_id=WP_000248097.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4205721	4206893	.	+	.	ID=gene-PHA55_RS20485;Name=PHA55_RS20485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20485;old_locus_tag=PHA55_20480
NZ_CP116044.1	Protein Homology	CDS	4205721	4206893	.	+	0	ID=cds-WP_000524972.1;Parent=gene-PHA55_RS20485;Dbxref=Genbank:WP_000524972.1;Name=WP_000524972.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239167.1;locus_tag=PHA55_RS20485;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_000524972.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4206929	4208008	.	-	.	ID=gene-PHA55_RS20490;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=PHA55_RS20490;old_locus_tag=PHA55_20485
NZ_CP116044.1	Protein Homology	CDS	4206929	4208008	.	-	0	ID=cds-WP_001300858.1;Parent=gene-PHA55_RS20490;Dbxref=Genbank:WP_001300858.1;Name=WP_001300858.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptG;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708797.1;locus_tag=PHA55_RS20490;product=LPS export ABC transporter permease LptG;protein_id=WP_001300858.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4208005	4209075	.	-	.	ID=gene-PHA55_RS20495;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=PHA55_RS20495;old_locus_tag=PHA55_20490
NZ_CP116044.1	Protein Homology	CDS	4208005	4209075	.	-	0	ID=cds-WP_000779661.1;Parent=gene-PHA55_RS20495;Dbxref=Genbank:WP_000779661.1;Name=WP_000779661.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptF;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708798.1;locus_tag=PHA55_RS20495;product=LPS export ABC transporter permease LptF;protein_id=WP_000779661.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4209106	4209666	.	-	.	ID=gene-PHA55_RS20500;Name=PHA55_RS20500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20500;old_locus_tag=PHA55_20495
NZ_CP116044.1	Protein Homology	CDS	4209106	4209666	.	-	0	ID=cds-WP_001299422.1;Parent=gene-PHA55_RS20500;Dbxref=Genbank:WP_001299422.1;Name=WP_001299422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708799.2;locus_tag=PHA55_RS20500;product=YtfJ family protein;protein_id=WP_001299422.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4209678	4210502	.	-	.	ID=gene-PHA55_RS20505;Name=PHA55_RS20505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20505;old_locus_tag=PHA55_20500
NZ_CP116044.1	Protein Homology	CDS	4209678	4210502	.	-	0	ID=cds-WP_000984976.1;Parent=gene-PHA55_RS20505;Dbxref=Genbank:WP_000984976.1;Name=WP_000984976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708800.1;locus_tag=PHA55_RS20505;product=hypothetical protein;protein_id=WP_000984976.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4210502	4211851	.	-	.	ID=gene-PHA55_RS20510;Name=PHA55_RS20510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20510;old_locus_tag=PHA55_20505
NZ_CP116044.1	Protein Homology	CDS	4210502	4211851	.	-	0	ID=cds-WP_000896880.1;Parent=gene-PHA55_RS20510;Dbxref=Genbank:WP_000896880.1;Name=WP_000896880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708801.1;locus_tag=PHA55_RS20510;product=lipopolysaccharide biosynthesis protein;protein_id=WP_000896880.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4211897	4212655	.	-	.	ID=gene-PHA55_RS20515;Name=PHA55_RS20515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20515;old_locus_tag=PHA55_20510
NZ_CP116044.1	Protein Homology	CDS	4211897	4212655	.	-	0	ID=cds-WP_000339512.1;Parent=gene-PHA55_RS20515;Dbxref=Genbank:WP_000339512.1;Name=WP_000339512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417458.1;locus_tag=PHA55_RS20515;product=hypothetical protein;protein_id=WP_000339512.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4212687	4213400	.	-	.	ID=gene-PHA55_RS20520;Name=yghS;gbkey=Gene;gene=yghS;gene_biotype=protein_coding;locus_tag=PHA55_RS20520;old_locus_tag=PHA55_20515
NZ_CP116044.1	Protein Homology	CDS	4212687	4213400	.	-	0	ID=cds-WP_001076233.1;Parent=gene-PHA55_RS20520;Dbxref=Genbank:WP_001076233.1;Name=WP_001076233.1;gbkey=CDS;gene=yghS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417459.1;locus_tag=PHA55_RS20520;product=dTMP kinase;protein_id=WP_001076233.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4213574	4214266	.	+	.	ID=gene-PHA55_RS20525;Name=yghT;gbkey=Gene;gene=yghT;gene_biotype=protein_coding;locus_tag=PHA55_RS20525;old_locus_tag=PHA55_20520
NZ_CP116044.1	Protein Homology	CDS	4213574	4214266	.	+	0	ID=cds-WP_001190783.1;Parent=gene-PHA55_RS20525;Dbxref=Genbank:WP_001190783.1;Name=WP_001190783.1;gbkey=CDS;gene=yghT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417460.1;locus_tag=PHA55_RS20525;product=dTMP kinase;protein_id=WP_001190783.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4214315	4215814	.	-	.	ID=gene-PHA55_RS20530;Name=pitB;gbkey=Gene;gene=pitB;gene_biotype=protein_coding;locus_tag=PHA55_RS20530;old_locus_tag=PHA55_20525
NZ_CP116044.1	Protein Homology	CDS	4214315	4215814	.	-	0	ID=cds-WP_000933296.1;Parent=gene-PHA55_RS20530;Dbxref=Genbank:WP_000933296.1;Name=WP_000933296.1;gbkey=CDS;gene=pitB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417461.1;locus_tag=PHA55_RS20530;product=inorganic phosphate transporter PitB;protein_id=WP_000933296.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4216106	4217965	.	-	.	ID=gene-PHA55_RS20535;Name=gss;gbkey=Gene;gene=gss;gene_biotype=protein_coding;locus_tag=PHA55_RS20535;old_locus_tag=PHA55_20530
NZ_CP116044.1	Protein Homology	CDS	4216106	4217965	.	-	0	ID=cds-WP_001345957.1;Parent=gene-PHA55_RS20535;Dbxref=Genbank:WP_001345957.1;Name=WP_001345957.1;gbkey=CDS;gene=gss;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417462.1;locus_tag=PHA55_RS20535;product=bifunctional glutathionylspermidine amidase/synthase;protein_id=WP_001345957.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4218170	4219036	.	+	.	ID=gene-PHA55_RS20540;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=PHA55_RS20540;old_locus_tag=PHA55_20535
NZ_CP116044.1	Protein Homology	CDS	4218170	4219036	.	+	0	ID=cds-WP_001345958.1;Parent=gene-PHA55_RS20540;Dbxref=Genbank:WP_001345958.1;Name=WP_001345958.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311901.2;locus_tag=PHA55_RS20540;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=WP_001345958.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	4219065	4219146	.	-	.	ID=gene-PHA55_RS20545;Name=PHA55_RS20545;end_range=4219146,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS20545;old_locus_tag=PHA55_20540;partial=true;pseudo=true;start_range=.,4219065
NZ_CP116044.1	Protein Homology	CDS	4219065	4219146	.	-	0	ID=cds-PHA55_RS20545;Parent=gene-PHA55_RS20545;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4219146,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518748.2;locus_tag=PHA55_RS20545;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4219065;transl_table=11
NZ_CP116044.1	RefSeq	gene	4219159	4219407	.	-	.	ID=gene-PHA55_RS20550;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;locus_tag=PHA55_RS20550;old_locus_tag=PHA55_20545
NZ_CP116044.1	Protein Homology	CDS	4219159	4219407	.	-	0	ID=cds-WP_000334896.1;Parent=gene-PHA55_RS20550;Dbxref=Genbank:WP_000334896.1;Name=WP_000334896.1;gbkey=CDS;gene=hybG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311902.1;locus_tag=PHA55_RS20550;product=hydrogenase maturation factor HybG;protein_id=WP_000334896.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4219420	4219761	.	-	.	ID=gene-PHA55_RS20555;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=PHA55_RS20555;old_locus_tag=PHA55_20550
NZ_CP116044.1	Protein Homology	CDS	4219420	4219761	.	-	0	ID=cds-WP_000544952.1;Parent=gene-PHA55_RS20555;Dbxref=Genbank:WP_000544952.1;Name=WP_000544952.1;Ontology_term=GO:0036211,GO:0008901;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417465.1;locus_tag=PHA55_RS20555;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544952.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4219754	4220242	.	-	.	ID=gene-PHA55_RS20560;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=PHA55_RS20560;old_locus_tag=PHA55_20555
NZ_CP116044.1	Protein Homology	CDS	4219754	4220242	.	-	0	ID=cds-WP_000134014.1;Parent=gene-PHA55_RS20560;Dbxref=Genbank:WP_000134014.1;Name=WP_000134014.1;gbkey=CDS;gene=hybE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417466.1;locus_tag=PHA55_RS20560;product=hydrogenase-2 assembly chaperone;protein_id=WP_000134014.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4220235	4220729	.	-	.	ID=gene-PHA55_RS20565;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=PHA55_RS20565;old_locus_tag=PHA55_20560
NZ_CP116044.1	Protein Homology	CDS	4220235	4220729	.	-	0	ID=cds-WP_001221953.1;Parent=gene-PHA55_RS20565;Dbxref=Genbank:WP_001221953.1;Name=WP_001221953.1;gbkey=CDS;gene=hybD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311905.1;locus_tag=PHA55_RS20565;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_001221953.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4220729	4222432	.	-	.	ID=gene-PHA55_RS20570;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;locus_tag=PHA55_RS20570;old_locus_tag=PHA55_20565
NZ_CP116044.1	Protein Homology	CDS	4220729	4222432	.	-	0	ID=cds-WP_000083065.1;Parent=gene-PHA55_RS20570;Dbxref=Genbank:WP_000083065.1;Name=WP_000083065.1;Ontology_term=GO:0008901;gbkey=CDS;gene=hybC;go_function=ferredoxin hydrogenase activity|0008901||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311906.1;locus_tag=PHA55_RS20570;product=hydrogenase 2 large subunit;protein_id=WP_000083065.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4222429	4223607	.	-	.	ID=gene-PHA55_RS20575;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;locus_tag=PHA55_RS20575;old_locus_tag=PHA55_20570
NZ_CP116044.1	Protein Homology	CDS	4222429	4223607	.	-	0	ID=cds-WP_000017680.1;Parent=gene-PHA55_RS20575;Dbxref=Genbank:WP_000017680.1;Name=WP_000017680.1;gbkey=CDS;gene=hybB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417469.1;locus_tag=PHA55_RS20575;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=WP_000017680.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4223597	4224583	.	-	.	ID=gene-PHA55_RS20580;Name=hybA;gbkey=Gene;gene=hybA;gene_biotype=protein_coding;locus_tag=PHA55_RS20580;old_locus_tag=PHA55_20575
NZ_CP116044.1	Protein Homology	CDS	4223597	4224583	.	-	0	ID=cds-WP_001081870.1;Parent=gene-PHA55_RS20580;Dbxref=Genbank:WP_001081870.1;Name=WP_001081870.1;gbkey=CDS;gene=hybA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311908.1;locus_tag=PHA55_RS20580;product=hydrogenase 2 operon protein HybA;protein_id=WP_001081870.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4224586	4225704	.	-	.	ID=gene-PHA55_RS20585;Name=hybO;gbkey=Gene;gene=hybO;gene_biotype=protein_coding;locus_tag=PHA55_RS20585;old_locus_tag=PHA55_20580
NZ_CP116044.1	Protein Homology	CDS	4224586	4225704	.	-	0	ID=cds-WP_000145410.1;Parent=gene-PHA55_RS20585;Dbxref=Genbank:WP_000145410.1;Name=WP_000145410.1;gbkey=CDS;gene=hybO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311909.1;locus_tag=PHA55_RS20585;product=hydrogenase 2 small subunit;protein_id=WP_000145410.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4225893	4226180	.	-	.	ID=gene-PHA55_RS20590;Name=yghW;gbkey=Gene;gene=yghW;gene_biotype=protein_coding;locus_tag=PHA55_RS20590;old_locus_tag=PHA55_20585
NZ_CP116044.1	Protein Homology	CDS	4225893	4226180	.	-	0	ID=cds-WP_001059136.1;Parent=gene-PHA55_RS20590;Dbxref=Genbank:WP_001059136.1;Name=WP_001059136.1;gbkey=CDS;gene=yghW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311910.1;locus_tag=PHA55_RS20590;product=DUF2623 family protein YghW;protein_id=WP_001059136.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4226299	4227186	.	-	.	ID=gene-PHA55_RS20595;Name=yghX;gbkey=Gene;gene=yghX;gene_biotype=protein_coding;locus_tag=PHA55_RS20595;old_locus_tag=PHA55_20590
NZ_CP116044.1	Protein Homology	CDS	4226299	4227186	.	-	0	ID=cds-WP_001345959.1;Parent=gene-PHA55_RS20595;Dbxref=Genbank:WP_001345959.1;Name=WP_001345959.1;gbkey=CDS;gene=yghX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311911.3;locus_tag=PHA55_RS20595;product=YghX family hydrolase;protein_id=WP_001345959.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4227343	4228383	.	+	.	ID=gene-PHA55_RS20600;Name=gpr;gbkey=Gene;gene=gpr;gene_biotype=protein_coding;locus_tag=PHA55_RS20600;old_locus_tag=PHA55_20595
NZ_CP116044.1	Protein Homology	CDS	4227343	4228383	.	+	0	ID=cds-WP_000262156.1;Parent=gene-PHA55_RS20600;Dbxref=Genbank:WP_000262156.1;Name=WP_000262156.1;gbkey=CDS;gene=gpr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708818.1;locus_tag=PHA55_RS20600;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WP_000262156.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4228423	4228917	.	-	.	ID=gene-PHA55_RS20605;Name=yqhA;gbkey=Gene;gene=yqhA;gene_biotype=protein_coding;locus_tag=PHA55_RS20605;old_locus_tag=PHA55_20600
NZ_CP116044.1	Protein Homology	CDS	4228423	4228917	.	-	0	ID=cds-WP_000439331.1;Parent=gene-PHA55_RS20605;Dbxref=Genbank:WP_000439331.1;Name=WP_000439331.1;gbkey=CDS;gene=yqhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311913.1;locus_tag=PHA55_RS20605;product=TIGR00645 family protein;protein_id=WP_000439331.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4229108	4229992	.	+	.	ID=gene-PHA55_RS20610;Name=yghA;gbkey=Gene;gene=yghA;gene_biotype=protein_coding;locus_tag=PHA55_RS20610;old_locus_tag=PHA55_20605
NZ_CP116044.1	Protein Homology	CDS	4229108	4229992	.	+	0	ID=cds-WP_000018758.1;Parent=gene-PHA55_RS20610;Dbxref=Genbank:WP_000018758.1;Name=WP_000018758.1;gbkey=CDS;gene=yghA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311914.1;locus_tag=PHA55_RS20610;product=NADP(+)-dependent aldehyde reductase;protein_id=WP_000018758.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4230222	4231202	.	-	.	ID=gene-PHA55_RS20615;Name=PHA55_RS20615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20615;old_locus_tag=PHA55_20610
NZ_CP116044.1	Protein Homology	CDS	4230222	4231202	.	-	0	ID=cds-WP_000399648.1-11;Parent=gene-PHA55_RS20615;Dbxref=Genbank:WP_000399648.1;Name=WP_000399648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904434.1;locus_tag=PHA55_RS20615;product=IS110-like element IS621 family transposase;protein_id=WP_000399648.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4231543	4231968	.	-	.	ID=gene-PHA55_RS20620;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=PHA55_RS20620;old_locus_tag=PHA55_20615
NZ_CP116044.1	Protein Homology	CDS	4231543	4231968	.	-	0	ID=cds-WP_001240712.1;Parent=gene-PHA55_RS20620;Dbxref=Genbank:WP_001240712.1;Name=WP_001240712.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311916.1;locus_tag=PHA55_RS20620;product=TonB system transport protein ExbD;protein_id=WP_001240712.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4231975	4232709	.	-	.	ID=gene-PHA55_RS20625;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=PHA55_RS20625;old_locus_tag=PHA55_20620
NZ_CP116044.1	Protein Homology	CDS	4231975	4232709	.	-	0	ID=cds-WP_000527844.1;Parent=gene-PHA55_RS20625;Dbxref=Genbank:WP_000527844.1;Name=WP_000527844.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311917.1;locus_tag=PHA55_RS20625;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_000527844.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4232961	4234148	.	+	.	ID=gene-PHA55_RS20630;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=PHA55_RS20630;old_locus_tag=PHA55_20625
NZ_CP116044.1	Protein Homology	CDS	4232961	4234148	.	+	0	ID=cds-WP_001369830.1;Parent=gene-PHA55_RS20630;Dbxref=Genbank:WP_001369830.1;Name=WP_001369830.1;Ontology_term=GO:0006520,GO:0019346,GO:0004121,GO:0030170;gbkey=CDS;gene=metC;go_function=cystathionine beta-lyase activity|0004121||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417481.1;locus_tag=PHA55_RS20630;product=cystathionine beta-lyase;protein_id=WP_001369830.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4234288	4234947	.	+	.	ID=gene-PHA55_RS20635;Name=yghB;gbkey=Gene;gene=yghB;gene_biotype=protein_coding;locus_tag=PHA55_RS20635;old_locus_tag=PHA55_20630
NZ_CP116044.1	Protein Homology	CDS	4234288	4234947	.	+	0	ID=cds-WP_000268414.1;Parent=gene-PHA55_RS20635;Dbxref=Genbank:WP_000268414.1;Name=WP_000268414.1;gbkey=CDS;gene=yghB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311920.1;locus_tag=PHA55_RS20635;product=DedA family general envelope maintenance protein YghB;protein_id=WP_000268414.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4234987	4235886	.	-	.	ID=gene-PHA55_RS20640;Name=yqhC;gbkey=Gene;gene=yqhC;gene_biotype=protein_coding;locus_tag=PHA55_RS20640;old_locus_tag=PHA55_20635
NZ_CP116044.1	Protein Homology	CDS	4234987	4235886	.	-	0	ID=cds-WP_001298382.1;Parent=gene-PHA55_RS20640;Dbxref=Genbank:WP_001298382.1;Name=WP_001298382.1;gbkey=CDS;gene=yqhC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001407451.1;locus_tag=PHA55_RS20640;product=DNA-binding transcriptional regulator YqhC;protein_id=WP_001298382.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4236080	4237243	.	+	.	ID=gene-PHA55_RS20645;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=PHA55_RS20645;old_locus_tag=PHA55_20640
NZ_CP116044.1	Protein Homology	CDS	4236080	4237243	.	+	0	ID=cds-WP_001058807.1;Parent=gene-PHA55_RS20645;Dbxref=Genbank:WP_001058807.1;Name=WP_001058807.1;Ontology_term=GO:0046872,GO:1990362;gbkey=CDS;gene=yqhD;go_function=metal ion binding|0046872||IEA,butanol dehydrogenase activity|1990362||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417484.1;locus_tag=PHA55_RS20645;product=alcohol dehydrogenase;protein_id=WP_001058807.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4237348	4238175	.	+	.	ID=gene-PHA55_RS20650;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=PHA55_RS20650;old_locus_tag=PHA55_20645
NZ_CP116044.1	Protein Homology	CDS	4237348	4238175	.	+	0	ID=cds-WP_000013149.1;Parent=gene-PHA55_RS20650;Dbxref=Genbank:WP_000013149.1;Name=WP_000013149.1;Ontology_term=GO:0050580;gbkey=CDS;gene=dkgA;go_function=2%2C5-didehydrogluconate reductase activity|0050580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417485.4;locus_tag=PHA55_RS20650;product=2%2C5-didehydrogluconate reductase DkgA;protein_id=WP_000013149.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4238375	4239301	.	+	.	ID=gene-PHA55_RS20655;Name=yqhG;gbkey=Gene;gene=yqhG;gene_biotype=protein_coding;locus_tag=PHA55_RS20655;old_locus_tag=PHA55_20650
NZ_CP116044.1	Protein Homology	CDS	4238375	4239301	.	+	0	ID=cds-WP_000691598.1;Parent=gene-PHA55_RS20655;Dbxref=Genbank:WP_000691598.1;Name=WP_000691598.1;gbkey=CDS;gene=yqhG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026195.1;locus_tag=PHA55_RS20655;product=YbjP/YqhG family protein;protein_id=WP_000691598.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4239352	4239609	.	+	.	ID=gene-PHA55_RS20660;Name=yqhH;gbkey=Gene;gene=yqhH;gene_biotype=protein_coding;locus_tag=PHA55_RS20660;old_locus_tag=PHA55_20655
NZ_CP116044.1	Protein Homology	CDS	4239352	4239609	.	+	0	ID=cds-WP_000848528.1;Parent=gene-PHA55_RS20660;Dbxref=Genbank:WP_000848528.1;Name=WP_000848528.1;gbkey=CDS;gene=yqhH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417487.1;locus_tag=PHA55_RS20660;product=lipoprotein YqhH;protein_id=WP_000848528.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4239652	4241871	.	-	.	ID=gene-PHA55_RS20665;Name=ygiQ;gbkey=Gene;gene=ygiQ;gene_biotype=protein_coding;locus_tag=PHA55_RS20665;old_locus_tag=PHA55_20660
NZ_CP116044.1	Protein Homology	CDS	4239652	4241871	.	-	0	ID=cds-WP_000095187.1;Parent=gene-PHA55_RS20665;Dbxref=Genbank:WP_000095187.1;Name=WP_000095187.1;Ontology_term=GO:1904047;gbkey=CDS;gene=ygiQ;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026196.1;locus_tag=PHA55_RS20665;product=YgiQ family radical SAM protein;protein_id=WP_000095187.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4241982	4243394	.	-	.	ID=gene-PHA55_RS20670;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=PHA55_RS20670;old_locus_tag=PHA55_20665
NZ_CP116044.1	Protein Homology	CDS	4241982	4243394	.	-	0	ID=cds-WP_000059395.1;Parent=gene-PHA55_RS20670;Dbxref=Genbank:WP_000059395.1;Name=WP_000059395.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311928.1;locus_tag=PHA55_RS20670;product=cell division protein FtsP;protein_id=WP_000059395.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4243469	4244206	.	-	.	ID=gene-PHA55_RS20675;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;gene_synonym=parF;locus_tag=PHA55_RS20675;old_locus_tag=PHA55_20670
NZ_CP116044.1	Protein Homology	CDS	4243469	4244206	.	-	0	ID=cds-WP_000965712.1;Parent=gene-PHA55_RS20675;Dbxref=Genbank:WP_000965712.1;Name=WP_000965712.1;gbkey=CDS;gene=plsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311929.1;locus_tag=PHA55_RS20675;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WP_000965712.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4244439	4246697	.	-	.	ID=gene-PHA55_RS20680;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=PHA55_RS20680;old_locus_tag=PHA55_20675
NZ_CP116044.1	Protein Homology	CDS	4244439	4246697	.	-	0	ID=cds-WP_001281881.1;Parent=gene-PHA55_RS20680;Dbxref=Genbank:WP_001281881.1;Name=WP_001281881.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311930.1;locus_tag=PHA55_RS20680;product=DNA topoisomerase IV subunit A;protein_id=WP_001281881.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4247243	4247725	.	-	.	ID=gene-PHA55_RS20685;Name=ygiV;gbkey=Gene;gene=ygiV;gene_biotype=protein_coding;locus_tag=PHA55_RS20685;old_locus_tag=PHA55_20680
NZ_CP116044.1	Protein Homology	CDS	4247243	4247725	.	-	0	ID=cds-WP_000183494.1;Parent=gene-PHA55_RS20685;Dbxref=Genbank:WP_000183494.1;Name=WP_000183494.1;gbkey=CDS;gene=ygiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708835.1;locus_tag=PHA55_RS20685;product=GyrI-like domain-containing protein;protein_id=WP_000183494.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4247778	4248170	.	-	.	ID=gene-PHA55_RS20690;Name=ygiW;gbkey=Gene;gene=ygiW;gene_biotype=protein_coding;locus_tag=PHA55_RS20690;old_locus_tag=PHA55_20685
NZ_CP116044.1	Protein Homology	CDS	4247778	4248170	.	-	0	ID=cds-WP_000712658.1;Parent=gene-PHA55_RS20690;Dbxref=Genbank:WP_000712658.1;Name=WP_000712658.1;gbkey=CDS;gene=ygiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311933.1;locus_tag=PHA55_RS20690;product=OB fold stress tolerance protein YgiW;protein_id=WP_000712658.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4248322	4248981	.	+	.	ID=gene-PHA55_RS20695;Name=qseB;gbkey=Gene;gene=qseB;gene_biotype=protein_coding;locus_tag=PHA55_RS20695;old_locus_tag=PHA55_20690
NZ_CP116044.1	Protein Homology	CDS	4248322	4248981	.	+	0	ID=cds-WP_001221502.1;Parent=gene-PHA55_RS20695;Dbxref=Genbank:WP_001221502.1;Name=WP_001221502.1;gbkey=CDS;gene=qseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311934.1;locus_tag=PHA55_RS20695;product=two-component system response regulator QseB;protein_id=WP_001221502.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4248978	4250327	.	+	.	ID=gene-PHA55_RS20700;Name=qseC;gbkey=Gene;gene=qseC;gene_biotype=protein_coding;locus_tag=PHA55_RS20700;old_locus_tag=PHA55_20695
NZ_CP116044.1	Protein Homology	CDS	4248978	4250327	.	+	0	ID=cds-WP_000673354.1;Parent=gene-PHA55_RS20700;Dbxref=Genbank:WP_000673354.1;Name=WP_000673354.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=qseC;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_306641.1;locus_tag=PHA55_RS20700;product=two-component system sensor histidine kinase QseC;protein_id=WP_000673354.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4250437	4251018	.	+	.	ID=gene-PHA55_RS20705;Name=mdaB;gbkey=Gene;gene=mdaB;gene_biotype=protein_coding;locus_tag=PHA55_RS20705;old_locus_tag=PHA55_20700
NZ_CP116044.1	Protein Homology	CDS	4250437	4251018	.	+	0	ID=cds-WP_000065430.1;Parent=gene-PHA55_RS20705;Dbxref=Genbank:WP_000065430.1;Name=WP_000065430.1;gbkey=CDS;gene=mdaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311937.1;locus_tag=PHA55_RS20705;product=NADPH:quinone oxidoreductase MdaB;protein_id=WP_000065430.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4251049	4251363	.	+	.	ID=gene-PHA55_RS20710;Name=ygiN;gbkey=Gene;gene=ygiN;gene_biotype=protein_coding;locus_tag=PHA55_RS20710;old_locus_tag=PHA55_20705
NZ_CP116044.1	Protein Homology	CDS	4251049	4251363	.	+	0	ID=cds-WP_000958598.1;Parent=gene-PHA55_RS20710;Dbxref=Genbank:WP_000958598.1;Name=WP_000958598.1;gbkey=CDS;gene=ygiN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311938.1;locus_tag=PHA55_RS20710;product=putative quinol monooxygenase;protein_id=WP_000958598.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4251411	4253303	.	-	.	ID=gene-PHA55_RS20715;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=PHA55_RS20715;old_locus_tag=PHA55_20710
NZ_CP116044.1	Protein Homology	CDS	4251411	4253303	.	-	0	ID=cds-WP_000195296.1;Parent=gene-PHA55_RS20715;Dbxref=Genbank:WP_000195296.1;Name=WP_000195296.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parE;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417502.1;locus_tag=PHA55_RS20715;product=DNA topoisomerase IV subunit B;protein_id=WP_000195296.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4253332	4253913	.	-	.	ID=gene-PHA55_RS20720;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=PHA55_RS20720;old_locus_tag=PHA55_20715
NZ_CP116044.1	Protein Homology	CDS	4253332	4253913	.	-	0	ID=cds-WP_000105733.1;Parent=gene-PHA55_RS20720;Dbxref=Genbank:WP_000105733.1;Name=WP_000105733.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311946.1;locus_tag=PHA55_RS20720;product=esterase YqiA;protein_id=WP_000105733.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4253913	4254740	.	-	.	ID=gene-PHA55_RS20725;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=PHA55_RS20725;old_locus_tag=PHA55_20720
NZ_CP116044.1	Protein Homology	CDS	4253913	4254740	.	-	0	ID=cds-WP_000444747.1;Parent=gene-PHA55_RS20725;Dbxref=Genbank:WP_000444747.1;Name=WP_000444747.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311947.1;locus_tag=PHA55_RS20725;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WP_000444747.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4254765	4255187	.	-	.	ID=gene-PHA55_RS20730;Name=yqiB;gbkey=Gene;gene=yqiB;gene_biotype=protein_coding;locus_tag=PHA55_RS20730;old_locus_tag=PHA55_20725
NZ_CP116044.1	Protein Homology	CDS	4254765	4255187	.	-	0	ID=cds-WP_000833393.1;Parent=gene-PHA55_RS20730;Dbxref=Genbank:WP_000833393.1;Name=WP_000833393.1;gbkey=CDS;gene=yqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311948.1;locus_tag=PHA55_RS20730;product=DUF1249 family protein;protein_id=WP_000833393.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4255188	4255817	.	-	.	ID=gene-PHA55_RS20735;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=PHA55_RS20735;old_locus_tag=PHA55_20730
NZ_CP116044.1	Protein Homology	CDS	4255188	4255817	.	-	0	ID=cds-WP_000917117.1;Parent=gene-PHA55_RS20735;Dbxref=Genbank:WP_000917117.1;Name=WP_000917117.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311949.1;locus_tag=PHA55_RS20735;product=ADP-ribose diphosphatase;protein_id=WP_000917117.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4256022	4257503	.	+	.	ID=gene-PHA55_RS20740;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=PHA55_RS20740;old_locus_tag=PHA55_20735
NZ_CP116044.1	Protein Homology	CDS	4256022	4257503	.	+	0	ID=cds-WP_000735278.1;Parent=gene-PHA55_RS20740;Dbxref=Genbank:WP_000735278.1;Name=WP_000735278.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417507.2;locus_tag=PHA55_RS20740;product=outer membrane channel protein TolC;protein_id=WP_000735278.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4257651	4258322	.	+	.	ID=gene-PHA55_RS20745;Name=ygiB;gbkey=Gene;gene=ygiB;gene_biotype=protein_coding;locus_tag=PHA55_RS20745;old_locus_tag=PHA55_20740
NZ_CP116044.1	Protein Homology	CDS	4257651	4258322	.	+	0	ID=cds-WP_000831543.1;Parent=gene-PHA55_RS20745;Dbxref=Genbank:WP_000831543.1;Name=WP_000831543.1;gbkey=CDS;gene=ygiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417509.3;locus_tag=PHA55_RS20745;product=DUF1190 family protein;protein_id=WP_000831543.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4258328	4259488	.	+	.	ID=gene-PHA55_RS20750;Name=ygiC;gbkey=Gene;gene=ygiC;gene_biotype=protein_coding;locus_tag=PHA55_RS20750;old_locus_tag=PHA55_20745
NZ_CP116044.1	Protein Homology	CDS	4258328	4259488	.	+	0	ID=cds-WP_000442860.1;Parent=gene-PHA55_RS20750;Dbxref=Genbank:WP_000442860.1;Name=WP_000442860.1;gbkey=CDS;gene=ygiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123077.1;locus_tag=PHA55_RS20750;product=glutathionylspermidine synthase family protein;protein_id=WP_000442860.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4259526	4260314	.	-	.	ID=gene-PHA55_RS20755;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=PHA55_RS20755;old_locus_tag=PHA55_20750
NZ_CP116044.1	Protein Homology	CDS	4259526	4260314	.	-	0	ID=cds-WP_024184509.1;Parent=gene-PHA55_RS20755;Dbxref=Genbank:WP_024184509.1;Name=WP_024184509.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356237.1;locus_tag=PHA55_RS20755;product=4%2C5-DOPA dioxygenase extradiol;protein_id=WP_024184509.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4260457	4261230	.	+	.	ID=gene-PHA55_RS20760;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=PHA55_RS20760;old_locus_tag=PHA55_20755
NZ_CP116044.1	Protein Homology	CDS	4260457	4261230	.	+	0	ID=cds-WP_001295627.1;Parent=gene-PHA55_RS20760;Dbxref=Genbank:WP_001295627.1;Name=WP_001295627.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311955.1;locus_tag=PHA55_RS20760;product=zinc transporter ZupT;protein_id=WP_001295627.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4261288	4261458	.	-	.	ID=gene-PHA55_RS20765;Name=yqiD;gbkey=Gene;gene=yqiD;gene_biotype=protein_coding;locus_tag=PHA55_RS20765;old_locus_tag=PHA55_20760
NZ_CP116044.1	Protein Homology	CDS	4261288	4261458	.	-	0	ID=cds-WP_000469266.1;Parent=gene-PHA55_RS20765;Dbxref=Genbank:WP_000469266.1;Name=WP_000469266.1;gbkey=CDS;gene=yqiD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518818.1;locus_tag=PHA55_RS20765;product=protein YqiD;protein_id=WP_000469266.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4261719	4262372	.	-	.	ID=gene-PHA55_RS20770;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=PHA55_RS20770;old_locus_tag=PHA55_20765
NZ_CP116044.1	Protein Homology	CDS	4261719	4262372	.	-	0	ID=cds-WP_001076997.1;Parent=gene-PHA55_RS20770;Dbxref=Genbank:WP_001076997.1;Name=WP_001076997.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311956.1;locus_tag=PHA55_RS20770;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_001076997.1;transl_table=11
NZ_CP116044.1	cmsearch	riboswitch	4262476	4262624	.	-	.	ID=id-NZ_CP116044.1:4262476..4262624;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
NZ_CP116044.1	RefSeq	gene	4262746	4263036	.	+	.	ID=gene-PHA55_RS20775;Name=ubiK;gbkey=Gene;gene=ubiK;gene_biotype=protein_coding;locus_tag=PHA55_RS20775;old_locus_tag=PHA55_20770
NZ_CP116044.1	Protein Homology	CDS	4262746	4263036	.	+	0	ID=cds-WP_001297598.1;Parent=gene-PHA55_RS20775;Dbxref=Genbank:WP_001297598.1;Name=WP_001297598.1;gbkey=CDS;gene=ubiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417514.4;locus_tag=PHA55_RS20775;product=ubiquinone biosynthesis accessory factor UbiK;protein_id=WP_001297598.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4263319	4263870	.	+	.	ID=gene-PHA55_RS20780;Name=ygiL;gbkey=Gene;gene=ygiL;gene_biotype=protein_coding;locus_tag=PHA55_RS20780;old_locus_tag=PHA55_20775
NZ_CP116044.1	Protein Homology	CDS	4263319	4263870	.	+	0	ID=cds-WP_001272149.1;Parent=gene-PHA55_RS20780;Dbxref=Genbank:WP_001272149.1;Name=WP_001272149.1;gbkey=CDS;gene=ygiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417515.1;locus_tag=PHA55_RS20780;product=fimbrial-like protein;protein_id=WP_001272149.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4263930	4266434	.	+	.	ID=gene-PHA55_RS20785;Name=PHA55_RS20785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20785;old_locus_tag=PHA55_20780
NZ_CP116044.1	Protein Homology	CDS	4263930	4266434	.	+	0	ID=cds-WP_260589850.1;Parent=gene-PHA55_RS20785;Dbxref=Genbank:WP_260589850.1;Name=WP_260589850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001480735.1;locus_tag=PHA55_RS20785;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_260589850.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4266450	4267199	.	+	.	ID=gene-PHA55_RS20790;Name=yqiH;gbkey=Gene;gene=yqiH;gene_biotype=protein_coding;locus_tag=PHA55_RS20790;old_locus_tag=PHA55_20785
NZ_CP116044.1	Protein Homology	CDS	4266450	4267199	.	+	0	ID=cds-WP_024244386.1;Parent=gene-PHA55_RS20790;Dbxref=Genbank:WP_024244386.1;Name=WP_024244386.1;gbkey=CDS;gene=yqiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417519.4;locus_tag=PHA55_RS20790;product=molecular chaperone;protein_id=WP_024244386.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4267201	4268265	.	+	.	ID=gene-PHA55_RS20795;Name=yqiI;gbkey=Gene;gene=yqiI;gene_biotype=protein_coding;locus_tag=PHA55_RS20795;old_locus_tag=PHA55_20790
NZ_CP116044.1	Protein Homology	CDS	4267201	4268265	.	+	0	ID=cds-WP_001269793.1;Parent=gene-PHA55_RS20795;Dbxref=Genbank:WP_001269793.1;Name=WP_001269793.1;gbkey=CDS;gene=yqiI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417520.1;locus_tag=PHA55_RS20795;product=fimbrial protein;protein_id=WP_001269793.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4268308	4268508	.	-	.	ID=gene-PHA55_RS20800;Name=glgS;gbkey=Gene;gene=glgS;gene_biotype=protein_coding;locus_tag=PHA55_RS20800;old_locus_tag=PHA55_20795
NZ_CP116044.1	Protein Homology	CDS	4268308	4268508	.	-	0	ID=cds-WP_000350095.1;Parent=gene-PHA55_RS20800;Dbxref=Genbank:WP_000350095.1;Name=WP_000350095.1;gbkey=CDS;gene=glgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417521.1;locus_tag=PHA55_RS20800;product=cell surface composition regulator GlgS;protein_id=WP_000350095.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4268777	4269406	.	+	.	ID=gene-PHA55_RS20805;Name=yqiJ;gbkey=Gene;gene=yqiJ;gene_biotype=protein_coding;locus_tag=PHA55_RS20805;old_locus_tag=PHA55_20800
NZ_CP116044.1	Protein Homology	CDS	4268777	4269406	.	+	0	ID=cds-WP_000599947.1;Parent=gene-PHA55_RS20805;Dbxref=Genbank:WP_000599947.1;Name=WP_000599947.1;gbkey=CDS;gene=yqiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417522.1;locus_tag=PHA55_RS20805;product=DUF1449 family protein;protein_id=WP_000599947.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4269433	4271094	.	+	.	ID=gene-PHA55_RS20810;Name=yqiK;gbkey=Gene;gene=yqiK;gene_biotype=protein_coding;locus_tag=PHA55_RS20810;old_locus_tag=PHA55_20805
NZ_CP116044.1	Protein Homology	CDS	4269433	4271094	.	+	0	ID=cds-WP_000341046.1;Parent=gene-PHA55_RS20810;Dbxref=Genbank:WP_000341046.1;Name=WP_000341046.1;gbkey=CDS;gene=yqiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417523.1;locus_tag=PHA55_RS20810;product=flotillin family protein;protein_id=WP_000341046.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4271333	4271392	.	+	.	ID=gene-PHA55_RS20815;Name=PHA55_RS20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS20815;old_locus_tag=PHA55_20810
NZ_CP116044.1	Protein Homology	CDS	4271333	4271392	.	+	0	ID=cds-WP_001387081.1;Parent=gene-PHA55_RS20815;Dbxref=Genbank:WP_001387081.1;Name=WP_001387081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791256.1;locus_tag=PHA55_RS20815;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001387081.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4271709	4271768	.	+	.	ID=gene-PHA55_RS20820;Name=ibsE;gbkey=Gene;gene=ibsE;gene_biotype=protein_coding;locus_tag=PHA55_RS20820;old_locus_tag=PHA55_20815
NZ_CP116044.1	Protein Homology	CDS	4271709	4271768	.	+	0	ID=cds-WP_001387082.1;Parent=gene-PHA55_RS20820;Dbxref=Genbank:WP_001387082.1;Name=WP_001387082.1;gbkey=CDS;gene=ibsE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791257.1;locus_tag=PHA55_RS20820;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001387082.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4271888	4273321	.	-	.	ID=gene-PHA55_RS20825;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=PHA55_RS20825;old_locus_tag=PHA55_20820
NZ_CP116044.1	Protein Homology	CDS	4271888	4273321	.	-	0	ID=cds-WP_000869178.1;Parent=gene-PHA55_RS20825;Dbxref=Genbank:WP_000869178.1;Name=WP_000869178.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417524.1;locus_tag=PHA55_RS20825;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_000869178.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4273369	4276209	.	-	.	ID=gene-PHA55_RS20830;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=PHA55_RS20830;old_locus_tag=PHA55_20825
NZ_CP116044.1	Protein Homology	CDS	4273369	4276209	.	-	0	ID=cds-WP_001315860.1;Parent=gene-PHA55_RS20830;Dbxref=Genbank:WP_001315860.1;Name=WP_001315860.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417525.1;locus_tag=PHA55_RS20830;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_001315860.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4276232	4277533	.	-	.	ID=gene-PHA55_RS20835;Name=ygiF;gbkey=Gene;gene=ygiF;gene_biotype=protein_coding;locus_tag=PHA55_RS20835;old_locus_tag=PHA55_20830
NZ_CP116044.1	Protein Homology	CDS	4276232	4277533	.	-	0	ID=cds-WP_000046264.1;Parent=gene-PHA55_RS20835;Dbxref=Genbank:WP_000046264.1;Name=WP_000046264.1;gbkey=CDS;gene=ygiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311964.1;locus_tag=PHA55_RS20835;product=inorganic triphosphatase;protein_id=WP_000046264.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4277775	4278395	.	+	.	ID=gene-PHA55_RS20840;Name=ygiM;gbkey=Gene;gene=ygiM;gene_biotype=protein_coding;locus_tag=PHA55_RS20840;old_locus_tag=PHA55_20835
NZ_CP116044.1	Protein Homology	CDS	4277775	4278395	.	+	0	ID=cds-WP_001125332.1;Parent=gene-PHA55_RS20840;Dbxref=Genbank:WP_001125332.1;Name=WP_001125332.1;gbkey=CDS;gene=ygiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311965.1;locus_tag=PHA55_RS20840;product=TIGR04211 family SH3 domain-containing protein;protein_id=WP_001125332.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4278459	4279697	.	+	.	ID=gene-PHA55_RS20845;Name=cca;gbkey=Gene;gene=cca;gene_biotype=protein_coding;locus_tag=PHA55_RS20845;old_locus_tag=PHA55_20840
NZ_CP116044.1	Protein Homology	CDS	4278459	4279697	.	+	0	ID=cds-WP_000708501.1;Parent=gene-PHA55_RS20845;Dbxref=Genbank:WP_000708501.1;Name=WP_000708501.1;gbkey=CDS;gene=cca;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311966.1;locus_tag=PHA55_RS20845;product=fused tRNA nucleotidyltransferase/2'%2C3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca;protein_id=WP_000708501.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4279860	4280681	.	-	.	ID=gene-PHA55_RS20850;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=PHA55_RS20850;old_locus_tag=PHA55_20845
NZ_CP116044.1	Protein Homology	CDS	4279860	4280681	.	-	0	ID=cds-WP_001305111.1;Parent=gene-PHA55_RS20850;Dbxref=Genbank:WP_001305111.1;Name=WP_001305111.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708867.2;locus_tag=PHA55_RS20850;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001305111.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4280772	4281140	.	-	.	ID=gene-PHA55_RS20855;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=PHA55_RS20855;old_locus_tag=PHA55_20850
NZ_CP116044.1	Protein Homology	CDS	4280772	4281140	.	-	0	ID=cds-WP_001295541.1;Parent=gene-PHA55_RS20855;Dbxref=Genbank:WP_001295541.1;Name=WP_001295541.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708868.2;locus_tag=PHA55_RS20855;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WP_001295541.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4281245	4281862	.	+	.	ID=gene-PHA55_RS20860;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=PHA55_RS20860;old_locus_tag=PHA55_20855
NZ_CP116044.1	Protein Homology	CDS	4281245	4281862	.	+	0	ID=cds-WP_001272796.1;Parent=gene-PHA55_RS20860;Dbxref=Genbank:WP_001272796.1;Name=WP_001272796.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311969.1;locus_tag=PHA55_RS20860;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_001272796.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	4281875	4282807	.	-	.	ID=gene-PHA55_RS20865;Name=ttdR;gbkey=Gene;gene=ttdR;gene_biotype=pseudogene;gene_synonym=dan;locus_tag=PHA55_RS20865;old_locus_tag=PHA55_20860;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	4281875	4282807	.	-	0	ID=cds-PHA55_RS20865;Parent=gene-PHA55_RS20865;Note=internal stop;gbkey=CDS;gene=ttdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417532.1;locus_tag=PHA55_RS20865;product=DNA-binding transcriptional activator TtdR;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	4283014	4283925	.	+	.	ID=gene-PHA55_RS20870;Name=ttdA;gbkey=Gene;gene=ttdA;gene_biotype=protein_coding;locus_tag=PHA55_RS20870;old_locus_tag=PHA55_20865
NZ_CP116044.1	Protein Homology	CDS	4283014	4283925	.	+	0	ID=cds-WP_000986797.1;Parent=gene-PHA55_RS20870;Dbxref=Genbank:WP_000986797.1;Name=WP_000986797.1;gbkey=CDS;gene=ttdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417533.1;locus_tag=PHA55_RS20870;product=L(+)-tartrate dehydratase subunit alpha;protein_id=WP_000986797.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4283922	4284527	.	+	.	ID=gene-PHA55_RS20875;Name=ttdB;gbkey=Gene;gene=ttdB;gene_biotype=protein_coding;locus_tag=PHA55_RS20875;old_locus_tag=PHA55_20870
NZ_CP116044.1	Protein Homology	CDS	4283922	4284527	.	+	0	ID=cds-WP_000722962.1;Parent=gene-PHA55_RS20875;Dbxref=Genbank:WP_000722962.1;Name=WP_000722962.1;Ontology_term=GO:0016836;gbkey=CDS;gene=ttdB;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417534.1;locus_tag=PHA55_RS20875;product=L(+)-tartrate dehydratase subunit beta;protein_id=WP_000722962.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4284576	4286039	.	+	.	ID=gene-PHA55_RS20880;Name=ttdT;gbkey=Gene;gene=ttdT;gene_biotype=protein_coding;locus_tag=PHA55_RS20880;old_locus_tag=PHA55_20875
NZ_CP116044.1	Protein Homology	CDS	4284576	4286039	.	+	0	ID=cds-WP_032217309.1;Parent=gene-PHA55_RS20880;Dbxref=Genbank:WP_032217309.1;Name=WP_032217309.1;gbkey=CDS;gene=ttdT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311973.1;locus_tag=PHA55_RS20880;product=L-tartrate/succinate antiporter;protein_id=WP_032217309.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4286082	4287095	.	-	.	ID=gene-PHA55_RS20885;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=PHA55_RS20885;old_locus_tag=PHA55_20880
NZ_CP116044.1	Protein Homology	CDS	4286082	4287095	.	-	0	ID=cds-WP_001264365.1;Parent=gene-PHA55_RS20885;Dbxref=Genbank:WP_001264365.1;Name=WP_001264365.1;Ontology_term=GO:0006400;gbkey=CDS;gene=tsaD;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=PHA55_RS20885;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_001264365.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4287333	4287548	.	+	.	ID=gene-PHA55_RS20890;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=PHA55_RS20890;old_locus_tag=PHA55_20885
NZ_CP116044.1	Protein Homology	CDS	4287333	4287548	.	+	0	ID=cds-WP_001144069.1;Parent=gene-PHA55_RS20890;Dbxref=Genbank:WP_001144069.1;Name=WP_001144069.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsU;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=PHA55_RS20890;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4287659	4289404	.	+	.	ID=gene-PHA55_RS20895;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=PHA55_RS20895;old_locus_tag=PHA55_20890
NZ_CP116044.1	Protein Homology	CDS	4287659	4289404	.	+	0	ID=cds-WP_130062361.1;Parent=gene-PHA55_RS20895;Dbxref=Genbank:WP_130062361.1;Name=WP_130062361.1;Ontology_term=GO:0006269,GO:0003896;gbkey=CDS;gene=dnaG;go_function=DNA primase activity|0003896||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311976.1;locus_tag=PHA55_RS20895;product=DNA primase;protein_id=WP_130062361.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4289599	4291440	.	+	.	ID=gene-PHA55_RS20900;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=PHA55_RS20900;old_locus_tag=PHA55_20895
NZ_CP116044.1	Protein Homology	CDS	4289599	4291440	.	+	0	ID=cds-WP_000437371.1;Parent=gene-PHA55_RS20900;Dbxref=Genbank:WP_000437371.1;Name=WP_000437371.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311977.1;locus_tag=PHA55_RS20900;product=RNA polymerase sigma factor RpoD;protein_id=WP_000437371.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4291518	4292024	.	-	.	ID=gene-PHA55_RS20905;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;locus_tag=PHA55_RS20905;old_locus_tag=PHA55_20900
NZ_CP116044.1	Protein Homology	CDS	4291518	4292024	.	-	0	ID=cds-WP_000228937.1;Parent=gene-PHA55_RS20905;Dbxref=Genbank:WP_000228937.1;Name=WP_000228937.1;Ontology_term=GO:0006285,GO:0000700;gbkey=CDS;gene=mug;go_function=mismatch base pair DNA N-glycosylase activity|0000700||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417540.1;locus_tag=PHA55_RS20905;product=G/U mismatch-specific DNA glycosylase;protein_id=WP_000228937.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4292149	4292224	.	+	.	ID=gene-PHA55_RS20910;Name=PHA55_RS20910;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS20910;old_locus_tag=PHA55_20905
NZ_CP116044.1	tRNAscan-SE	tRNA	4292149	4292224	.	+	.	ID=rna-PHA55_RS20910;Parent=gene-PHA55_RS20910;anticodon=(pos:4292182..4292184);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS20910;product=tRNA-Ile
NZ_CP116044.1	tRNAscan-SE	exon	4292149	4292224	.	+	.	ID=exon-PHA55_RS20910-1;Parent=rna-PHA55_RS20910;anticodon=(pos:4292182..4292184);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS20910;product=tRNA-Ile
NZ_CP116044.1	RefSeq	gene	4292278	4293042	.	-	.	ID=gene-PHA55_RS20915;Name=nfeF;gbkey=Gene;gene=nfeF;gene_biotype=protein_coding;locus_tag=PHA55_RS20915;old_locus_tag=PHA55_20910
NZ_CP116044.1	Protein Homology	CDS	4292278	4293042	.	-	0	ID=cds-WP_001065895.1;Parent=gene-PHA55_RS20915;Dbxref=Genbank:WP_001065895.1;Name=WP_001065895.1;gbkey=CDS;gene=nfeF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311979.1;locus_tag=PHA55_RS20915;product=NADPH-dependent ferric chelate reductase;protein_id=WP_001065895.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4293319	4293942	.	+	.	ID=gene-PHA55_RS20920;Name=nfeR;gbkey=Gene;gene=nfeR;gene_biotype=protein_coding;gene_synonym=yqjI;locus_tag=PHA55_RS20920;old_locus_tag=PHA55_20915
NZ_CP116044.1	Protein Homology	CDS	4293319	4293942	.	+	0	ID=cds-WP_000018000.1;Parent=gene-PHA55_RS20920;Dbxref=Genbank:WP_000018000.1;Name=WP_000018000.1;gbkey=CDS;gene=nfeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417542.1;locus_tag=PHA55_RS20920;product=DNA-binding transcriptional regulator NfeR;protein_id=WP_000018000.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4294096	4295616	.	-	.	ID=gene-PHA55_RS20925;Name=aer;gbkey=Gene;gene=aer;gene_biotype=protein_coding;locus_tag=PHA55_RS20925;old_locus_tag=PHA55_20920
NZ_CP116044.1	Protein Homology	CDS	4294096	4295616	.	-	0	ID=cds-WP_000094682.1;Parent=gene-PHA55_RS20925;Dbxref=Genbank:WP_000094682.1;Name=WP_000094682.1;gbkey=CDS;gene=aer;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311981.2;locus_tag=PHA55_RS20925;product=aerotaxis sensor receptor Aer;protein_id=WP_000094682.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4296034	4297413	.	+	.	ID=gene-PHA55_RS20930;Name=ygjG;gbkey=Gene;gene=ygjG;gene_biotype=protein_coding;locus_tag=PHA55_RS20930;old_locus_tag=PHA55_20925
NZ_CP116044.1	Protein Homology	CDS	4296034	4297413	.	+	0	ID=cds-WP_001297164.1;Parent=gene-PHA55_RS20930;Dbxref=Genbank:WP_001297164.1;Name=WP_001297164.1;Ontology_term=GO:0009447,GO:0033094;gbkey=CDS;gene=ygjG;go_function=butane-1%2C4-diamine:2-oxoglutarate aminotransferase activity|0033094||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417544.5;locus_tag=PHA55_RS20930;product=putrescine aminotransferase;protein_id=WP_001297164.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4297455	4297787	.	-	.	ID=gene-PHA55_RS20935;Name=ygjH;gbkey=Gene;gene=ygjH;gene_biotype=protein_coding;locus_tag=PHA55_RS20935;old_locus_tag=PHA55_20930
NZ_CP116044.1	Protein Homology	CDS	4297455	4297787	.	-	0	ID=cds-WP_000450589.1;Parent=gene-PHA55_RS20935;Dbxref=Genbank:WP_000450589.1;Name=WP_000450589.1;gbkey=CDS;gene=ygjH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311983.1;locus_tag=PHA55_RS20935;product=tRNA-binding protein;protein_id=WP_000450589.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4298006	4298989	.	+	.	ID=gene-PHA55_RS20940;Name=ebgR;gbkey=Gene;gene=ebgR;gene_biotype=protein_coding;locus_tag=PHA55_RS20940;old_locus_tag=PHA55_20935
NZ_CP116044.1	Protein Homology	CDS	4298006	4298989	.	+	0	ID=cds-WP_000212470.1;Parent=gene-PHA55_RS20940;Dbxref=Genbank:WP_000212470.1;Name=WP_000212470.1;gbkey=CDS;gene=ebgR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417546.1;locus_tag=PHA55_RS20940;product=transcriptional regulator EbgR;protein_id=WP_000212470.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4299173	4302265	.	+	.	ID=gene-PHA55_RS20945;Name=ebgA;gbkey=Gene;gene=ebgA;gene_biotype=protein_coding;locus_tag=PHA55_RS20945;old_locus_tag=PHA55_20940
NZ_CP116044.1	Protein Homology	CDS	4299173	4302265	.	+	0	ID=cds-WP_001472304.1;Parent=gene-PHA55_RS20945;Dbxref=Genbank:WP_001472304.1;Name=WP_001472304.1;Ontology_term=GO:0004565;gbkey=CDS;gene=ebgA;go_function=beta-galactosidase activity|0004565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311985.2;locus_tag=PHA55_RS20945;product=beta-galactosidase subunit alpha;protein_id=WP_001472304.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4302262	4302711	.	+	.	ID=gene-PHA55_RS20950;Name=ebgC;gbkey=Gene;gene=ebgC;gene_biotype=protein_coding;locus_tag=PHA55_RS20950;old_locus_tag=PHA55_20945
NZ_CP116044.1	Protein Homology	CDS	4302262	4302711	.	+	0	ID=cds-WP_001472305.1;Parent=gene-PHA55_RS20950;Dbxref=Genbank:WP_001472305.1;Name=WP_001472305.1;gbkey=CDS;gene=ebgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417548.1;locus_tag=PHA55_RS20950;product=beta-galactosidase subunit beta;protein_id=WP_001472305.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4302774	4304207	.	+	.	ID=gene-PHA55_RS20955;Name=ygjI;gbkey=Gene;gene=ygjI;gene_biotype=protein_coding;locus_tag=PHA55_RS20955;old_locus_tag=PHA55_20950
NZ_CP116044.1	Protein Homology	CDS	4302774	4304207	.	+	0	ID=cds-WP_042099611.1;Parent=gene-PHA55_RS20955;Dbxref=Genbank:WP_042099611.1;Name=WP_042099611.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ygjI;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311987.1;locus_tag=PHA55_RS20955;product=amino acid permease;protein_id=WP_042099611.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4304341	4305411	.	+	.	ID=gene-PHA55_RS20960;Name=ygjJ;gbkey=Gene;gene=ygjJ;gene_biotype=protein_coding;locus_tag=PHA55_RS20960;old_locus_tag=PHA55_20955
NZ_CP116044.1	Protein Homology	CDS	4304341	4305411	.	+	0	ID=cds-WP_000767652.1;Parent=gene-PHA55_RS20960;Dbxref=Genbank:WP_000767652.1;Name=WP_000767652.1;gbkey=CDS;gene=ygjJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417550.1;locus_tag=PHA55_RS20960;product=protein YgjJ;protein_id=WP_000767652.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4305428	4307779	.	+	.	ID=gene-PHA55_RS20965;Name=ygjK;gbkey=Gene;gene=ygjK;gene_biotype=protein_coding;locus_tag=PHA55_RS20965;old_locus_tag=PHA55_20960
NZ_CP116044.1	Protein Homology	CDS	4305428	4307779	.	+	0	ID=cds-WP_000695476.1;Parent=gene-PHA55_RS20965;Dbxref=Genbank:WP_000695476.1;Name=WP_000695476.1;Ontology_term=GO:0005991,GO:0004555;gbkey=CDS;gene=ygjK;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417551.1;locus_tag=PHA55_RS20965;product=alpha-glucosidase;protein_id=WP_000695476.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4308105	4310123	.	+	.	ID=gene-PHA55_RS20970;Name=fadH;gbkey=Gene;gene=fadH;gene_biotype=protein_coding;locus_tag=PHA55_RS20970;old_locus_tag=PHA55_20965
NZ_CP116044.1	Protein Homology	CDS	4308105	4310123	.	+	0	ID=cds-WP_000121473.1;Parent=gene-PHA55_RS20970;Dbxref=Genbank:WP_000121473.1;Name=WP_000121473.1;gbkey=CDS;gene=fadH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708886.1;locus_tag=PHA55_RS20970;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_000121473.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4310168	4310584	.	-	.	ID=gene-PHA55_RS20975;Name=higA;gbkey=Gene;gene=higA;gene_biotype=protein_coding;locus_tag=PHA55_RS20975;old_locus_tag=PHA55_20970
NZ_CP116044.1	Protein Homology	CDS	4310168	4310584	.	-	0	ID=cds-WP_000560266.1;Parent=gene-PHA55_RS20975;Dbxref=Genbank:WP_000560266.1;Name=WP_000560266.1;gbkey=CDS;gene=higA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417553.1;locus_tag=PHA55_RS20975;product=type II toxin-antitoxin system antitoxin HigA;protein_id=WP_000560266.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	4310581	4310664	.	-	.	ID=gene-PHA55_RS20980;Name=PHA55_RS20980;end_range=4310664,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS20980;old_locus_tag=PHA55_20975;partial=true;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	4310581	4310664	.	-	0	ID=cds-PHA55_RS20980;Parent=gene-PHA55_RS20980;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4310664,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311992.1;locus_tag=PHA55_RS20980;partial=true;product=type II toxin-antitoxin system HigB family toxin;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	4310855	4311991	.	-	.	ID=gene-PHA55_RS20985;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=PHA55_RS20985;old_locus_tag=PHA55_20980
NZ_CP116044.1	Protein Homology	CDS	4310855	4311991	.	-	0	ID=cds-WP_000018690.1;Parent=gene-PHA55_RS20985;Dbxref=Genbank:WP_000018690.1;Name=WP_000018690.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417555.4;locus_tag=PHA55_RS20985;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WP_000018690.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4312076	4312579	.	+	.	ID=gene-PHA55_RS20990;Name=ygjP;gbkey=Gene;gene=ygjP;gene_biotype=protein_coding;locus_tag=PHA55_RS20990;old_locus_tag=PHA55_20985
NZ_CP116044.1	Protein Homology	CDS	4312076	4312579	.	+	0	ID=cds-WP_001295542.1;Parent=gene-PHA55_RS20990;Dbxref=Genbank:WP_001295542.1;Name=WP_001295542.1;gbkey=CDS;gene=ygjP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311994.2;locus_tag=PHA55_RS20990;product=M48 family metallopeptidase;protein_id=WP_001295542.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4312656	4313339	.	+	.	ID=gene-PHA55_RS20995;Name=ygjQ;gbkey=Gene;gene=ygjQ;gene_biotype=protein_coding;locus_tag=PHA55_RS20995;old_locus_tag=PHA55_20990
NZ_CP116044.1	Protein Homology	CDS	4312656	4313339	.	+	0	ID=cds-WP_001183042.1;Parent=gene-PHA55_RS20995;Dbxref=Genbank:WP_001183042.1;Name=WP_001183042.1;gbkey=CDS;gene=ygjQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001183047.1;locus_tag=PHA55_RS20995;product=vancomycin high temperature exclusion protein;protein_id=WP_001183042.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4313418	4314404	.	+	.	ID=gene-PHA55_RS21000;Name=ygjR;gbkey=Gene;gene=ygjR;gene_biotype=protein_coding;locus_tag=PHA55_RS21000;old_locus_tag=PHA55_20995
NZ_CP116044.1	Protein Homology	CDS	4313418	4314404	.	+	0	ID=cds-WP_001297165.1;Parent=gene-PHA55_RS21000;Dbxref=Genbank:WP_001297165.1;Name=WP_001297165.1;gbkey=CDS;gene=ygjR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417558.2;locus_tag=PHA55_RS21000;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_001297165.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4314687	4315652	.	+	.	ID=gene-PHA55_RS21005;Name=alx;gbkey=Gene;gene=alx;gene_biotype=protein_coding;locus_tag=PHA55_RS21005;old_locus_tag=PHA55_21000
NZ_CP116044.1	Protein Homology	CDS	4314687	4315652	.	+	0	ID=cds-WP_001098806.1;Parent=gene-PHA55_RS21005;Dbxref=Genbank:WP_001098806.1;Name=WP_001098806.1;gbkey=CDS;gene=alx;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026201.1;locus_tag=PHA55_RS21005;product=TerC family membrane protein Alx;protein_id=WP_001098806.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4316051	4317295	.	+	.	ID=gene-PHA55_RS21010;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=PHA55_RS21010;old_locus_tag=PHA55_21005
NZ_CP116044.1	Protein Homology	CDS	4316051	4317295	.	+	0	ID=cds-WP_000211655.1;Parent=gene-PHA55_RS21010;Dbxref=Genbank:WP_000211655.1;Name=WP_000211655.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311998.1;locus_tag=PHA55_RS21010;product=serine/threonine transporter SstT;protein_id=WP_000211655.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4317300	4317851	.	-	.	ID=gene-PHA55_RS21015;Name=ygjV;gbkey=Gene;gene=ygjV;gene_biotype=protein_coding;locus_tag=PHA55_RS21015;old_locus_tag=PHA55_21010
NZ_CP116044.1	Protein Homology	CDS	4317300	4317851	.	-	0	ID=cds-WP_000128137.1;Parent=gene-PHA55_RS21015;Dbxref=Genbank:WP_000128137.1;Name=WP_000128137.1;gbkey=CDS;gene=ygjV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311999.1;locus_tag=PHA55_RS21015;product=YgjV family protein;protein_id=WP_000128137.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4317934	4319421	.	-	.	ID=gene-PHA55_RS21020;Name=uxaA;gbkey=Gene;gene=uxaA;gene_biotype=protein_coding;locus_tag=PHA55_RS21020;old_locus_tag=PHA55_21015
NZ_CP116044.1	Protein Homology	CDS	4317934	4319421	.	-	0	ID=cds-WP_105276783.1;Parent=gene-PHA55_RS21020;Dbxref=Genbank:WP_105276783.1;Name=WP_105276783.1;gbkey=CDS;gene=uxaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199350.1;locus_tag=PHA55_RS21020;product=altronate dehydratase;protein_id=WP_105276783.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4319436	4320848	.	-	.	ID=gene-PHA55_RS21025;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=PHA55_RS21025;old_locus_tag=PHA55_21020
NZ_CP116044.1	Protein Homology	CDS	4319436	4320848	.	-	0	ID=cds-WP_000187441.1;Parent=gene-PHA55_RS21025;Dbxref=Genbank:WP_000187441.1;Name=WP_000187441.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077755.1;locus_tag=PHA55_RS21025;product=glucuronate isomerase;protein_id=WP_000187441.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4321331	4322629	.	+	.	ID=gene-PHA55_RS21030;Name=exuT;gbkey=Gene;gene=exuT;gene_biotype=protein_coding;locus_tag=PHA55_RS21030;old_locus_tag=PHA55_21025
NZ_CP116044.1	Protein Homology	CDS	4321331	4322629	.	+	0	ID=cds-WP_001226463.1;Parent=gene-PHA55_RS21030;Dbxref=Genbank:WP_001226463.1;Name=WP_001226463.1;gbkey=CDS;gene=exuT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708898.2;locus_tag=PHA55_RS21030;product=hexuronate transporter ExuT;protein_id=WP_001226463.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4322717	4323805	.	-	.	ID=gene-PHA55_RS21035;Name=PHA55_RS21035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS21035;old_locus_tag=PHA55_21030
NZ_CP116044.1	Protein Homology	CDS	4322717	4323805	.	-	0	ID=cds-WP_001245988.1;Parent=gene-PHA55_RS21035;Dbxref=Genbank:WP_001245988.1;Name=WP_001245988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001352530.1;locus_tag=PHA55_RS21035;product=CfaE/CblD family pilus tip adhesin;protein_id=WP_001245988.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4323802	4326486	.	-	.	ID=gene-PHA55_RS21040;Name=PHA55_RS21040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS21040;old_locus_tag=PHA55_21035
NZ_CP116044.1	Protein Homology	CDS	4323802	4326486	.	-	0	ID=cds-WP_000358676.1;Parent=gene-PHA55_RS21040;Dbxref=Genbank:WP_000358676.1;Name=WP_000358676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666746.1;locus_tag=PHA55_RS21040;product=TcfC E-set like domain-containing protein;protein_id=WP_000358676.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4326578	4327078	.	-	.	ID=gene-PHA55_RS21045;Name=PHA55_RS21045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS21045;old_locus_tag=PHA55_21040
NZ_CP116044.1	Protein Homology	CDS	4326578	4327078	.	-	0	ID=cds-WP_000755097.1;Parent=gene-PHA55_RS21045;Dbxref=Genbank:WP_000755097.1;Name=WP_000755097.1;Ontology_term=GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000755097.1;locus_tag=PHA55_RS21045;product=CS1 type fimbrial major subunit;protein_id=WP_000755097.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4327108	4327824	.	-	.	ID=gene-PHA55_RS21050;Name=PHA55_RS21050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS21050;old_locus_tag=PHA55_21045
NZ_CP116044.1	Protein Homology	CDS	4327108	4327824	.	-	0	ID=cds-WP_260589851.1;Parent=gene-PHA55_RS21050;Dbxref=Genbank:WP_260589851.1;Name=WP_260589851.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000225871.1;locus_tag=PHA55_RS21050;product=fimbria/pilus periplasmic chaperone;protein_id=WP_260589851.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4328120	4328896	.	+	.	ID=gene-PHA55_RS21055;Name=exuR;gbkey=Gene;gene=exuR;gene_biotype=protein_coding;locus_tag=PHA55_RS21055;old_locus_tag=PHA55_21050
NZ_CP116044.1	Protein Homology	CDS	4328120	4328896	.	+	0	ID=cds-WP_000406488.1;Parent=gene-PHA55_RS21055;Dbxref=Genbank:WP_000406488.1;Name=WP_000406488.1;gbkey=CDS;gene=exuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708902.1;locus_tag=PHA55_RS21055;product=transcriptional regulator ExuR;protein_id=WP_000406488.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4329136	4329219	.	+	.	ID=gene-PHA55_RS21060;Name=yqiM;gbkey=Gene;gene=yqiM;gene_biotype=protein_coding;locus_tag=PHA55_RS21060;old_locus_tag=PHA55_21055
NZ_CP116044.1	Protein Homology	CDS	4329136	4329219	.	+	0	ID=cds-WP_211180508.1;Parent=gene-PHA55_RS21060;Dbxref=Genbank:WP_211180508.1;Name=WP_211180508.1;gbkey=CDS;gene=yqiM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051200.1;locus_tag=PHA55_RS21060;product=protein YqiM;protein_id=WP_211180508.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4329241	4329903	.	+	.	ID=gene-PHA55_RS21065;Name=yqjA;gbkey=Gene;gene=yqjA;gene_biotype=protein_coding;locus_tag=PHA55_RS21065;old_locus_tag=PHA55_21060
NZ_CP116044.1	Protein Homology	CDS	4329241	4329903	.	+	0	ID=cds-WP_000422149.1;Parent=gene-PHA55_RS21065;Dbxref=Genbank:WP_000422149.1;Name=WP_000422149.1;gbkey=CDS;gene=yqjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312004.1;locus_tag=PHA55_RS21065;product=DedA family general envelope maintenance protein YqjA;protein_id=WP_000422149.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4329907	4330290	.	+	.	ID=gene-PHA55_RS21070;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=PHA55_RS21070;old_locus_tag=PHA55_21065
NZ_CP116044.1	Protein Homology	CDS	4329907	4330290	.	+	0	ID=cds-WP_001166768.1;Parent=gene-PHA55_RS21070;Dbxref=Genbank:WP_001166768.1;Name=WP_001166768.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417567.1;locus_tag=PHA55_RS21070;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WP_001166768.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4330437	4330805	.	+	.	ID=gene-PHA55_RS21075;Name=yqjC;gbkey=Gene;gene=yqjC;gene_biotype=protein_coding;locus_tag=PHA55_RS21075;old_locus_tag=PHA55_21070
NZ_CP116044.1	Protein Homology	CDS	4330437	4330805	.	+	0	ID=cds-WP_001297156.1;Parent=gene-PHA55_RS21075;Dbxref=Genbank:WP_001297156.1;Name=WP_001297156.1;gbkey=CDS;gene=yqjC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417568.2;locus_tag=PHA55_RS21075;product=DUF1090 family protein YqjC;protein_id=WP_001297156.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4330843	4331148	.	+	.	ID=gene-PHA55_RS21080;Name=yqjD;gbkey=Gene;gene=yqjD;gene_biotype=protein_coding;locus_tag=PHA55_RS21080;old_locus_tag=PHA55_21075
NZ_CP116044.1	Protein Homology	CDS	4330843	4331148	.	+	0	ID=cds-WP_000031415.1;Parent=gene-PHA55_RS21080;Dbxref=Genbank:WP_000031415.1;Name=WP_000031415.1;gbkey=CDS;gene=yqjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312007.1;locus_tag=PHA55_RS21080;product=YqjD family protein;protein_id=WP_000031415.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4331151	4331555	.	+	.	ID=gene-PHA55_RS21085;Name=yqjE;gbkey=Gene;gene=yqjE;gene_biotype=protein_coding;locus_tag=PHA55_RS21085;old_locus_tag=PHA55_21080
NZ_CP116044.1	Protein Homology	CDS	4331151	4331555	.	+	0	ID=cds-WP_000785722.1;Parent=gene-PHA55_RS21085;Dbxref=Genbank:WP_000785722.1;Name=WP_000785722.1;gbkey=CDS;gene=yqjE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312008.1;locus_tag=PHA55_RS21085;product=phage holin family protein;protein_id=WP_000785722.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4331545	4331844	.	+	.	ID=gene-PHA55_RS21090;Name=yqjK;gbkey=Gene;gene=yqjK;gene_biotype=protein_coding;locus_tag=PHA55_RS21090;old_locus_tag=PHA55_21085
NZ_CP116044.1	Protein Homology	CDS	4331545	4331844	.	+	0	ID=cds-WP_000096086.1;Parent=gene-PHA55_RS21090;Dbxref=Genbank:WP_000096086.1;Name=WP_000096086.1;gbkey=CDS;gene=yqjK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312009.1;locus_tag=PHA55_RS21090;product=YqjK-like family protein;protein_id=WP_000096086.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4332030	4332422	.	+	.	ID=gene-PHA55_RS21095;Name=yqjF;gbkey=Gene;gene=yqjF;gene_biotype=protein_coding;locus_tag=PHA55_RS21095;old_locus_tag=PHA55_21090
NZ_CP116044.1	Protein Homology	CDS	4332030	4332422	.	+	0	ID=cds-WP_000732233.1;Parent=gene-PHA55_RS21095;Dbxref=Genbank:WP_000732233.1;Name=WP_000732233.1;gbkey=CDS;gene=yqjF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=PHA55_RS21095;product=DoxX family protein;protein_id=WP_000732233.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4332492	4333478	.	+	.	ID=gene-PHA55_RS21100;Name=yqjG;gbkey=Gene;gene=yqjG;gene_biotype=protein_coding;locus_tag=PHA55_RS21100;old_locus_tag=PHA55_21095
NZ_CP116044.1	Protein Homology	CDS	4332492	4333478	.	+	0	ID=cds-WP_000531193.1;Parent=gene-PHA55_RS21100;Dbxref=Genbank:WP_000531193.1;Name=WP_000531193.1;gbkey=CDS;gene=yqjG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708909.2;locus_tag=PHA55_RS21100;product=glutathionyl-hydroquinone reductase YqjG;protein_id=WP_000531193.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4333771	4334136	.	+	.	ID=gene-PHA55_RS21105;Name=yhaH;gbkey=Gene;gene=yhaH;gene_biotype=protein_coding;locus_tag=PHA55_RS21105;old_locus_tag=PHA55_21100
NZ_CP116044.1	Protein Homology	CDS	4333771	4334136	.	+	0	ID=cds-WP_000384145.1;Parent=gene-PHA55_RS21105;Dbxref=Genbank:WP_000384145.1;Name=WP_000384145.1;gbkey=CDS;gene=yhaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312012.1;locus_tag=PHA55_RS21105;product=DUF805 domain-containing protein;protein_id=WP_000384145.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4334378	4334734	.	+	.	ID=gene-PHA55_RS21110;Name=PHA55_RS21110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS21110;old_locus_tag=PHA55_21105
NZ_CP116044.1	Protein Homology	CDS	4334378	4334734	.	+	0	ID=cds-WP_001198780.1;Parent=gene-PHA55_RS21110;Dbxref=Genbank:WP_001198780.1;Name=WP_001198780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312013.1;locus_tag=PHA55_RS21110;product=DUF805 domain-containing protein;protein_id=WP_001198780.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4334785	4335681	.	-	.	ID=gene-PHA55_RS21115;Name=yhaJ;gbkey=Gene;gene=yhaJ;gene_biotype=protein_coding;locus_tag=PHA55_RS21115;old_locus_tag=PHA55_21110
NZ_CP116044.1	Protein Homology	CDS	4334785	4335681	.	-	0	ID=cds-WP_001041010.1;Parent=gene-PHA55_RS21115;Dbxref=Genbank:WP_001041010.1;Name=WP_001041010.1;gbkey=CDS;gene=yhaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312014.1;locus_tag=PHA55_RS21115;product=DNA-binding transcriptional regulator YhaJ;protein_id=WP_001041010.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4335786	4336487	.	+	.	ID=gene-PHA55_RS21120;Name=yhaK;gbkey=Gene;gene=yhaK;gene_biotype=protein_coding;locus_tag=PHA55_RS21120;old_locus_tag=PHA55_21115
NZ_CP116044.1	Protein Homology	CDS	4335786	4336487	.	+	0	ID=cds-WP_000633577.1;Parent=gene-PHA55_RS21120;Dbxref=Genbank:WP_000633577.1;Name=WP_000633577.1;gbkey=CDS;gene=yhaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417577.1;locus_tag=PHA55_RS21120;product=pirin family protein;protein_id=WP_000633577.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4336510	4336674	.	+	.	ID=gene-PHA55_RS21125;Name=yhaL;gbkey=Gene;gene=yhaL;gene_biotype=protein_coding;locus_tag=PHA55_RS21125;old_locus_tag=PHA55_21120
NZ_CP116044.1	Protein Homology	CDS	4336510	4336674	.	+	0	ID=cds-WP_001295544.1;Parent=gene-PHA55_RS21125;Dbxref=Genbank:WP_001295544.1;Name=WP_001295544.1;gbkey=CDS;gene=yhaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312016.2;locus_tag=PHA55_RS21125;product=protein YhaL;protein_id=WP_001295544.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4336886	4338196	.	-	.	ID=gene-PHA55_RS21130;Name=cyuA;gbkey=Gene;gene=cyuA;gene_biotype=protein_coding;locus_tag=PHA55_RS21130;old_locus_tag=PHA55_21125
NZ_CP116044.1	Protein Homology	CDS	4336886	4338196	.	-	0	ID=cds-WP_000460519.1;Parent=gene-PHA55_RS21130;Dbxref=Genbank:WP_000460519.1;Name=WP_000460519.1;gbkey=CDS;gene=cyuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312017.1;locus_tag=PHA55_RS21130;product=cysteine desulfidase;protein_id=WP_000460519.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4338224	4339555	.	-	.	ID=gene-PHA55_RS21135;Name=cyuP;gbkey=Gene;gene=cyuP;gene_biotype=protein_coding;locus_tag=PHA55_RS21135;old_locus_tag=PHA55_21130
NZ_CP116044.1	Protein Homology	CDS	4338224	4339555	.	-	0	ID=cds-WP_000401598.1;Parent=gene-PHA55_RS21135;Dbxref=Genbank:WP_000401598.1;Name=WP_000401598.1;gbkey=CDS;gene=cyuP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026203.3;locus_tag=PHA55_RS21135;product=amino acid permease;protein_id=WP_000401598.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4339830	4341194	.	-	.	ID=gene-PHA55_RS21140;Name=tdcG;gbkey=Gene;gene=tdcG;gene_biotype=protein_coding;locus_tag=PHA55_RS21140;old_locus_tag=PHA55_21135
NZ_CP116044.1	Protein Homology	CDS	4339830	4341194	.	-	0	ID=cds-WP_000622115.1;Parent=gene-PHA55_RS21140;Dbxref=Genbank:WP_000622115.1;Name=WP_000622115.1;gbkey=CDS;gene=tdcG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026204.1;locus_tag=PHA55_RS21140;product=L-serine ammonia-lyase;protein_id=WP_000622115.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4341266	4341655	.	-	.	ID=gene-PHA55_RS21145;Name=tdcF;gbkey=Gene;gene=tdcF;gene_biotype=protein_coding;locus_tag=PHA55_RS21145;old_locus_tag=PHA55_21140
NZ_CP116044.1	Protein Homology	CDS	4341266	4341655	.	-	0	ID=cds-WP_000719990.1;Parent=gene-PHA55_RS21145;Dbxref=Genbank:WP_000719990.1;Name=WP_000719990.1;gbkey=CDS;gene=tdcF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312020.2;locus_tag=PHA55_RS21145;product=enamine/imine deaminase;protein_id=WP_000719990.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4341669	4343963	.	-	.	ID=gene-PHA55_RS21150;Name=tdcE;gbkey=Gene;gene=tdcE;gene_biotype=protein_coding;locus_tag=PHA55_RS21150;old_locus_tag=PHA55_21145
NZ_CP116044.1	Protein Homology	CDS	4341669	4343963	.	-	0	ID=cds-WP_000861734.1;Parent=gene-PHA55_RS21150;Dbxref=Genbank:WP_000861734.1;Name=WP_000861734.1;gbkey=CDS;gene=tdcE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026205.1;locus_tag=PHA55_RS21150;product=2-ketobutyrate formate-lyase/pyruvate formate-lyase;protein_id=WP_000861734.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4343997	4345205	.	-	.	ID=gene-PHA55_RS21155;Name=tdcD;gbkey=Gene;gene=tdcD;gene_biotype=protein_coding;locus_tag=PHA55_RS21155;old_locus_tag=PHA55_21150
NZ_CP116044.1	Protein Homology	CDS	4343997	4345205	.	-	0	ID=cds-WP_001297162.1;Parent=gene-PHA55_RS21155;Dbxref=Genbank:WP_001297162.1;Name=WP_001297162.1;Ontology_term=GO:0006082,GO:0016310,GO:0016301;gbkey=CDS;gene=tdcD;go_function=kinase activity|0016301||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417585.2;locus_tag=PHA55_RS21155;product=propionate kinase;protein_id=WP_001297162.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4345231	4346562	.	-	.	ID=gene-PHA55_RS21160;Name=tdcC;gbkey=Gene;gene=tdcC;gene_biotype=protein_coding;locus_tag=PHA55_RS21160;old_locus_tag=PHA55_21155
NZ_CP116044.1	Protein Homology	CDS	4345231	4346562	.	-	0	ID=cds-WP_000107720.1;Parent=gene-PHA55_RS21160;Dbxref=Genbank:WP_000107720.1;Name=WP_000107720.1;gbkey=CDS;gene=tdcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312023.1;locus_tag=PHA55_RS21160;product=threonine/serine transporter TdcC;protein_id=WP_000107720.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4346584	4347573	.	-	.	ID=gene-PHA55_RS21165;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=PHA55_RS21165;old_locus_tag=PHA55_21160
NZ_CP116044.1	Protein Homology	CDS	4346584	4347573	.	-	0	ID=cds-WP_000548347.1;Parent=gene-PHA55_RS21165;Dbxref=Genbank:WP_000548347.1;Name=WP_000548347.1;Ontology_term=GO:0006567,GO:0004794,GO:0030170;gbkey=CDS;gene=tdcB;go_function=L-threonine ammonia-lyase activity|0004794||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312024.1;locus_tag=PHA55_RS21165;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=WP_000548347.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4347672	4348610	.	-	.	ID=gene-PHA55_RS21170;Name=tdcA;gbkey=Gene;gene=tdcA;gene_biotype=protein_coding;locus_tag=PHA55_RS21170;old_locus_tag=PHA55_21165
NZ_CP116044.1	Protein Homology	CDS	4347672	4348610	.	-	0	ID=cds-WP_000104211.1;Parent=gene-PHA55_RS21170;Dbxref=Genbank:WP_000104211.1;Name=WP_000104211.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=tdcA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312025.1;locus_tag=PHA55_RS21170;product=transcriptional regulator TdcA;protein_id=WP_000104211.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4348925	4349143	.	+	.	ID=gene-PHA55_RS21175;Name=tdcR;gbkey=Gene;gene=tdcR;gene_biotype=protein_coding;locus_tag=PHA55_RS21175;old_locus_tag=PHA55_21170
NZ_CP116044.1	Protein Homology	CDS	4348925	4349143	.	+	0	ID=cds-WP_001390702.1;Parent=gene-PHA55_RS21175;Dbxref=Genbank:WP_001390702.1;Name=WP_001390702.1;gbkey=CDS;gene=tdcR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417589.4;locus_tag=PHA55_RS21175;product=transcriptional activator TdcR;protein_id=WP_001390702.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4349399	4349938	.	+	.	ID=gene-PHA55_RS21180;Name=yhaB;gbkey=Gene;gene=yhaB;gene_biotype=protein_coding;locus_tag=PHA55_RS21180;old_locus_tag=PHA55_21175
NZ_CP116044.1	Protein Homology	CDS	4349399	4349938	.	+	0	ID=cds-WP_000675746.1;Parent=gene-PHA55_RS21180;Dbxref=Genbank:WP_000675746.1;Name=WP_000675746.1;gbkey=CDS;gene=yhaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312027.2;locus_tag=PHA55_RS21180;product=protein YhaB;protein_id=WP_000675746.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	4349960	4351149	.	+	.	ID=gene-PHA55_RS21185;Name=yhaC;gbkey=Gene;gene=yhaC;gene_biotype=pseudogene;locus_tag=PHA55_RS21185;old_locus_tag=PHA55_21180;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	4349960	4351149	.	+	0	ID=cds-PHA55_RS21185;Parent=gene-PHA55_RS21185;Note=frameshifted;gbkey=CDS;gene=yhaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312028.1;locus_tag=PHA55_RS21185;product=YhaC family protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	4351876	4352252	.	-	.	ID=gene-PHA55_RS21190;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=PHA55_RS21190;old_locus_tag=PHA55_21185
NZ_CP116044.1	cmsearch	RNase_P_RNA	4351876	4352252	.	-	.	ID=rna-PHA55_RS21190;Parent=gene-PHA55_RS21190;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS21190;product=RNase P RNA component class A
NZ_CP116044.1	cmsearch	exon	4351876	4352252	.	-	.	ID=exon-PHA55_RS21190-1;Parent=rna-PHA55_RS21190;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS21190;product=RNase P RNA component class A
NZ_CP116044.1	RefSeq	gene	4352285	4353430	.	-	.	ID=gene-PHA55_RS21195;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;locus_tag=PHA55_RS21195;old_locus_tag=PHA55_21190
NZ_CP116044.1	Protein Homology	CDS	4352285	4353430	.	-	0	ID=cds-WP_001299416.1;Parent=gene-PHA55_RS21195;Dbxref=Genbank:WP_001299416.1;Name=WP_001299416.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;gene=garK;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312029.2;locus_tag=PHA55_RS21195;product=glycerate 2-kinase;protein_id=WP_001299416.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4353527	4354417	.	-	.	ID=gene-PHA55_RS21200;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=PHA55_RS21200;old_locus_tag=PHA55_21195
NZ_CP116044.1	Protein Homology	CDS	4353527	4354417	.	-	0	ID=cds-WP_001303675.1;Parent=gene-PHA55_RS21200;Dbxref=Genbank:WP_001303675.1;Name=WP_001303675.1;Ontology_term=GO:0046487,GO:0008679;gbkey=CDS;gene=garR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312030.2;locus_tag=PHA55_RS21200;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_001303675.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4354447	4355217	.	-	.	ID=gene-PHA55_RS21205;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;locus_tag=PHA55_RS21205;old_locus_tag=PHA55_21200
NZ_CP116044.1	Protein Homology	CDS	4354447	4355217	.	-	0	ID=cds-WP_001058227.1;Parent=gene-PHA55_RS21205;Dbxref=Genbank:WP_001058227.1;Name=WP_001058227.1;Ontology_term=GO:0019394,GO:0008672;gbkey=CDS;gene=garL;go_function=2-dehydro-3-deoxyglucarate aldolase activity|0008672||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312031.1;locus_tag=PHA55_RS21205;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=WP_001058227.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4355233	4356567	.	-	.	ID=gene-PHA55_RS21210;Name=garP;gbkey=Gene;gene=garP;gene_biotype=protein_coding;locus_tag=PHA55_RS21210;old_locus_tag=PHA55_21205
NZ_CP116044.1	Protein Homology	CDS	4355233	4356567	.	-	0	ID=cds-WP_000599636.1;Parent=gene-PHA55_RS21210;Dbxref=Genbank:WP_000599636.1;Name=WP_000599636.1;gbkey=CDS;gene=garP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312032.1;locus_tag=PHA55_RS21210;product=galactarate/glucarate/glycerate transporter GarP;protein_id=WP_000599636.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4356942	4358513	.	+	.	ID=gene-PHA55_RS21215;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=PHA55_RS21215;old_locus_tag=PHA55_21210
NZ_CP116044.1	Protein Homology	CDS	4356942	4358513	.	+	0	ID=cds-WP_001273741.1;Parent=gene-PHA55_RS21215;Dbxref=Genbank:WP_001273741.1;Name=WP_001273741.1;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312033.1;locus_tag=PHA55_RS21215;product=galactarate dehydratase;protein_id=WP_001273741.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4358662	4358997	.	+	.	ID=gene-PHA55_RS21220;Name=prlF;gbkey=Gene;gene=prlF;gene_biotype=protein_coding;locus_tag=PHA55_RS21220;old_locus_tag=PHA55_21215
NZ_CP116044.1	Protein Homology	CDS	4358662	4358997	.	+	0	ID=cds-WP_001307405.1;Parent=gene-PHA55_RS21220;Dbxref=Genbank:WP_001307405.1;Name=WP_001307405.1;gbkey=CDS;gene=prlF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417598.1;locus_tag=PHA55_RS21220;product=type II toxin-antitoxin system antitoxin PrlF;protein_id=WP_001307405.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4358997	4359461	.	+	.	ID=gene-PHA55_RS21225;Name=yhaV;gbkey=Gene;gene=yhaV;gene_biotype=protein_coding;locus_tag=PHA55_RS21225;old_locus_tag=PHA55_21220
NZ_CP116044.1	Protein Homology	CDS	4358997	4359461	.	+	0	ID=cds-WP_000347273.1;Parent=gene-PHA55_RS21225;Dbxref=Genbank:WP_000347273.1;Name=WP_000347273.1;gbkey=CDS;gene=yhaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312035.1;locus_tag=PHA55_RS21225;product=type II toxin-antitoxin system ribonuclease toxin YhaV;protein_id=WP_000347273.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4359516	4360325	.	-	.	ID=gene-PHA55_RS21230;Name=agaR;gbkey=Gene;gene=agaR;gene_biotype=protein_coding;locus_tag=PHA55_RS21230;old_locus_tag=PHA55_21225
NZ_CP116044.1	Protein Homology	CDS	4359516	4360325	.	-	0	ID=cds-WP_000072180.1;Parent=gene-PHA55_RS21230;Dbxref=Genbank:WP_000072180.1;Name=WP_000072180.1;gbkey=CDS;gene=agaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312036.1;locus_tag=PHA55_RS21230;product=aga operon transcriptional regulator AgaR;protein_id=WP_000072180.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4360574	4361854	.	+	.	ID=gene-PHA55_RS21235;Name=kbaZ;gbkey=Gene;gene=kbaZ;gene_biotype=protein_coding;locus_tag=PHA55_RS21235;old_locus_tag=PHA55_21230
NZ_CP116044.1	Protein Homology	CDS	4360574	4361854	.	+	0	ID=cds-WP_000681921.1;Parent=gene-PHA55_RS21235;Dbxref=Genbank:WP_000681921.1;Name=WP_000681921.1;gbkey=CDS;gene=kbaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417601.1;locus_tag=PHA55_RS21235;product=tagatose-bisphosphate aldolase subunit KbaZ;protein_id=WP_000681921.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4361877	4362350	.	+	.	ID=gene-PHA55_RS21240;Name=agaV;gbkey=Gene;gene=agaV;gene_biotype=protein_coding;locus_tag=PHA55_RS21240;old_locus_tag=PHA55_21235
NZ_CP116044.1	Protein Homology	CDS	4361877	4362350	.	+	0	ID=cds-WP_001295547.1;Parent=gene-PHA55_RS21240;Dbxref=Genbank:WP_001295547.1;Name=WP_001295547.1;gbkey=CDS;gene=agaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312038.2;locus_tag=PHA55_RS21240;product=PTS N-acetylgalactosamine transporter subunit IIB;protein_id=WP_001295547.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4362361	4363140	.	+	.	ID=gene-PHA55_RS21245;Name=agaW;gbkey=Gene;gene=agaW;gene_biotype=protein_coding;locus_tag=PHA55_RS21245;old_locus_tag=PHA55_21240
NZ_CP116044.1	Protein Homology	CDS	4362361	4363140	.	+	0	ID=cds-WP_000406214.1;Parent=gene-PHA55_RS21245;Dbxref=Genbank:WP_000406214.1;Name=WP_000406214.1;gbkey=CDS;gene=agaW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312039.1;locus_tag=PHA55_RS21245;product=PTS N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000406214.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4363130	4364008	.	+	.	ID=gene-PHA55_RS21250;Name=agaE;gbkey=Gene;gene=agaE;gene_biotype=protein_coding;locus_tag=PHA55_RS21250;old_locus_tag=PHA55_21245
NZ_CP116044.1	Protein Homology	CDS	4363130	4364008	.	+	0	ID=cds-WP_001295548.1;Parent=gene-PHA55_RS21250;Dbxref=Genbank:WP_001295548.1;Name=WP_001295548.1;gbkey=CDS;gene=agaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079236.1;locus_tag=PHA55_RS21250;product=PTS N-acetylgalactosamine transporter subunit IID;protein_id=WP_001295548.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4364026	4364460	.	+	.	ID=gene-PHA55_RS21255;Name=agaF;gbkey=Gene;gene=agaF;gene_biotype=protein_coding;locus_tag=PHA55_RS21255;old_locus_tag=PHA55_21250
NZ_CP116044.1	Protein Homology	CDS	4364026	4364460	.	+	0	ID=cds-WP_000948824.1;Parent=gene-PHA55_RS21255;Dbxref=Genbank:WP_000948824.1;Name=WP_000948824.1;gbkey=CDS;gene=agaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312041.1;locus_tag=PHA55_RS21255;product=PTS galactosamine/N-acetylgalactosamine transporter subunit IIA;protein_id=WP_000948824.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4364457	4365590	.	+	.	ID=gene-PHA55_RS21260;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=PHA55_RS21260;old_locus_tag=PHA55_21255
NZ_CP116044.1	Protein Homology	CDS	4364457	4365590	.	+	0	ID=cds-WP_001307408.1;Parent=gene-PHA55_RS21260;Dbxref=Genbank:WP_001307408.1;Name=WP_001307408.1;Ontology_term=GO:0006040,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=amino sugar metabolic process|0006040||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312042.2;locus_tag=PHA55_RS21260;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_001307408.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4365940	4367094	.	+	.	ID=gene-PHA55_RS21265;Name=agaS;gbkey=Gene;gene=agaS;gene_biotype=protein_coding;locus_tag=PHA55_RS21265;old_locus_tag=PHA55_21260
NZ_CP116044.1	Protein Homology	CDS	4365940	4367094	.	+	0	ID=cds-WP_001114873.1;Parent=gene-PHA55_RS21265;Dbxref=Genbank:WP_001114873.1;Name=WP_001114873.1;gbkey=CDS;gene=agaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417605.1;locus_tag=PHA55_RS21265;product=AgaS family sugar isomerase;protein_id=WP_001114873.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4367107	4367967	.	+	.	ID=gene-PHA55_RS21270;Name=kbaY;gbkey=Gene;gene=kbaY;gene_biotype=protein_coding;locus_tag=PHA55_RS21270;old_locus_tag=PHA55_21265
NZ_CP116044.1	Protein Homology	CDS	4367107	4367967	.	+	0	ID=cds-WP_000022766.1;Parent=gene-PHA55_RS21270;Dbxref=Genbank:WP_000022766.1;Name=WP_000022766.1;gbkey=CDS;gene=kbaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312044.1;locus_tag=PHA55_RS21270;product=tagatose-bisphosphate aldolase subunit KbaY;protein_id=WP_000022766.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4368134	4368610	.	+	.	ID=gene-PHA55_RS21275;Name=agaB;gbkey=Gene;gene=agaB;gene_biotype=protein_coding;locus_tag=PHA55_RS21275;old_locus_tag=PHA55_21270
NZ_CP116044.1	Protein Homology	CDS	4368134	4368610	.	+	0	ID=cds-WP_000098017.1;Parent=gene-PHA55_RS21275;Dbxref=Genbank:WP_000098017.1;Name=WP_000098017.1;gbkey=CDS;gene=agaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312045.1;locus_tag=PHA55_RS21275;product=PTS galactosamine transporter subunit IIB;protein_id=WP_000098017.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4368649	4369452	.	+	.	ID=gene-PHA55_RS21280;Name=agaC;gbkey=Gene;gene=agaC;gene_biotype=protein_coding;locus_tag=PHA55_RS21280;old_locus_tag=PHA55_21275
NZ_CP116044.1	Protein Homology	CDS	4368649	4369452	.	+	0	ID=cds-WP_000544489.1;Parent=gene-PHA55_RS21280;Dbxref=Genbank:WP_000544489.1;Name=WP_000544489.1;gbkey=CDS;gene=agaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417608.1;locus_tag=PHA55_RS21280;product=PTS galactosamine transporter subunit IIC;protein_id=WP_000544489.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4369442	4370233	.	+	.	ID=gene-PHA55_RS21285;Name=agaD;gbkey=Gene;gene=agaD;gene_biotype=protein_coding;locus_tag=PHA55_RS21285;old_locus_tag=PHA55_21280
NZ_CP116044.1	Protein Homology	CDS	4369442	4370233	.	+	0	ID=cds-WP_000534351.1;Parent=gene-PHA55_RS21285;Dbxref=Genbank:WP_000534351.1;Name=WP_000534351.1;gbkey=CDS;gene=agaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708938.2;locus_tag=PHA55_RS21285;product=PTS galactosamine transporter subunit IID;protein_id=WP_000534351.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4370234	4370989	.	+	.	ID=gene-PHA55_RS21290;Name=agaI;gbkey=Gene;gene=agaI;gene_biotype=protein_coding;locus_tag=PHA55_RS21290;old_locus_tag=PHA55_21285
NZ_CP116044.1	Protein Homology	CDS	4370234	4370989	.	+	0	ID=cds-WP_001307409.1;Parent=gene-PHA55_RS21290;Dbxref=Genbank:WP_001307409.1;Name=WP_001307409.1;gbkey=CDS;gene=agaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708939.1;locus_tag=PHA55_RS21290;product=galactosamine-6-phosphate isomerase;protein_id=WP_001307409.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4371389	4371973	.	+	.	ID=gene-PHA55_RS21295;Name=yraH;gbkey=Gene;gene=yraH;gene_biotype=protein_coding;locus_tag=PHA55_RS21295;old_locus_tag=PHA55_21290
NZ_CP116044.1	Protein Homology	CDS	4371389	4371973	.	+	0	ID=cds-WP_001045442.1;Parent=gene-PHA55_RS21295;Dbxref=Genbank:WP_001045442.1;Name=WP_001045442.1;gbkey=CDS;gene=yraH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312047.1;locus_tag=PHA55_RS21295;product=fimbrial protein;protein_id=WP_001045442.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4372053	4372748	.	+	.	ID=gene-PHA55_RS21300;Name=yraI;gbkey=Gene;gene=yraI;gene_biotype=protein_coding;locus_tag=PHA55_RS21300;old_locus_tag=PHA55_21295
NZ_CP116044.1	Protein Homology	CDS	4372053	4372748	.	+	0	ID=cds-WP_000044768.1;Parent=gene-PHA55_RS21300;Dbxref=Genbank:WP_000044768.1;Name=WP_000044768.1;gbkey=CDS;gene=yraI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417612.1;locus_tag=PHA55_RS21300;product=molecular chaperone;protein_id=WP_000044768.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4372778	4375294	.	+	.	ID=gene-PHA55_RS21305;Name=yraJ;gbkey=Gene;gene=yraJ;gene_biotype=protein_coding;locus_tag=PHA55_RS21305;old_locus_tag=PHA55_21300
NZ_CP116044.1	Protein Homology	CDS	4372778	4375294	.	+	0	ID=cds-WP_001136478.1;Parent=gene-PHA55_RS21305;Dbxref=Genbank:WP_001136478.1;Name=WP_001136478.1;gbkey=CDS;gene=yraJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312049.1;locus_tag=PHA55_RS21305;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_001136478.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4375305	4376396	.	+	.	ID=gene-PHA55_RS21310;Name=yraK;gbkey=Gene;gene=yraK;gene_biotype=protein_coding;locus_tag=PHA55_RS21310;old_locus_tag=PHA55_21305
NZ_CP116044.1	Protein Homology	CDS	4375305	4376396	.	+	0	ID=cds-WP_000817005.1;Parent=gene-PHA55_RS21310;Dbxref=Genbank:WP_000817005.1;Name=WP_000817005.1;gbkey=CDS;gene=yraK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417614.1;locus_tag=PHA55_RS21310;product=fimbrial protein;protein_id=WP_000817005.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4376439	4377299	.	-	.	ID=gene-PHA55_RS21315;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=PHA55_RS21315;old_locus_tag=PHA55_21310
NZ_CP116044.1	Protein Homology	CDS	4376439	4377299	.	-	0	ID=cds-WP_000809253.1;Parent=gene-PHA55_RS21315;Dbxref=Genbank:WP_000809253.1;Name=WP_000809253.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312054.1;locus_tag=PHA55_RS21315;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_000809253.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4377363	4379399	.	+	.	ID=gene-PHA55_RS21320;Name=lpoA;gbkey=Gene;gene=lpoA;gene_biotype=protein_coding;locus_tag=PHA55_RS21320;old_locus_tag=PHA55_21315
NZ_CP116044.1	Protein Homology	CDS	4377363	4379399	.	+	0	ID=cds-WP_000249157.1;Parent=gene-PHA55_RS21320;Dbxref=Genbank:WP_000249157.1;Name=WP_000249157.1;gbkey=CDS;gene=lpoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312055.1;locus_tag=PHA55_RS21320;product=penicillin-binding protein activator LpoA;protein_id=WP_000249157.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4379357	4379752	.	+	.	ID=gene-PHA55_RS21325;Name=yraN;gbkey=Gene;gene=yraN;gene_biotype=protein_coding;locus_tag=PHA55_RS21325;old_locus_tag=PHA55_21320
NZ_CP116044.1	Protein Homology	CDS	4379357	4379752	.	+	0	ID=cds-WP_000246855.1;Parent=gene-PHA55_RS21325;Dbxref=Genbank:WP_000246855.1;Name=WP_000246855.1;gbkey=CDS;gene=yraN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312056.1;locus_tag=PHA55_RS21325;product=YraN family protein;protein_id=WP_000246855.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4379772	4380362	.	+	.	ID=gene-PHA55_RS21330;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=PHA55_RS21330;old_locus_tag=PHA55_21325
NZ_CP116044.1	Protein Homology	CDS	4379772	4380362	.	+	0	ID=cds-WP_001158035.1;Parent=gene-PHA55_RS21330;Dbxref=Genbank:WP_001158035.1;Name=WP_001158035.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001483830.1;locus_tag=PHA55_RS21330;product=DnaA initiator-associating protein DiaA;protein_id=WP_001158035.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4380372	4380947	.	+	.	ID=gene-PHA55_RS21335;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=PHA55_RS21335;old_locus_tag=PHA55_21330
NZ_CP116044.1	Protein Homology	CDS	4380372	4380947	.	+	0	ID=cds-WP_000646033.1;Parent=gene-PHA55_RS21335;Dbxref=Genbank:WP_000646033.1;Name=WP_000646033.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312058.1;locus_tag=PHA55_RS21335;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WP_000646033.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4381061	4382101	.	-	.	ID=gene-PHA55_RS21340;Name=yraQ;gbkey=Gene;gene=yraQ;gene_biotype=protein_coding;locus_tag=PHA55_RS21340;old_locus_tag=PHA55_21335
NZ_CP116044.1	Protein Homology	CDS	4381061	4382101	.	-	0	ID=cds-WP_000147579.1;Parent=gene-PHA55_RS21340;Dbxref=Genbank:WP_000147579.1;Name=WP_000147579.1;gbkey=CDS;gene=yraQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417620.1;locus_tag=PHA55_RS21340;product=permease;protein_id=WP_000147579.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4382174	4382809	.	-	.	ID=gene-PHA55_RS21345;Name=yraR;gbkey=Gene;gene=yraR;gene_biotype=protein_coding;locus_tag=PHA55_RS21345;old_locus_tag=PHA55_21340
NZ_CP116044.1	Protein Homology	CDS	4382174	4382809	.	-	0	ID=cds-WP_001298741.1;Parent=gene-PHA55_RS21345;Dbxref=Genbank:WP_001298741.1;Name=WP_001298741.1;gbkey=CDS;gene=yraR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312060.2;locus_tag=PHA55_RS21345;product=NAD(P)H-binding protein;protein_id=WP_001298741.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4382937	4383455	.	+	.	ID=gene-PHA55_RS21350;Name=yhbO;gbkey=Gene;gene=yhbO;gene_biotype=protein_coding;locus_tag=PHA55_RS21350;old_locus_tag=PHA55_21345
NZ_CP116044.1	Protein Homology	CDS	4382937	4383455	.	+	0	ID=cds-WP_000037608.1;Parent=gene-PHA55_RS21350;Dbxref=Genbank:WP_000037608.1;Name=WP_000037608.1;gbkey=CDS;gene=yhbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417622.2;locus_tag=PHA55_RS21350;product=protein/nucleic acid deglycase;protein_id=WP_000037608.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4383435	4383878	.	-	.	ID=gene-PHA55_RS21355;Name=yhbP;gbkey=Gene;gene=yhbP;gene_biotype=protein_coding;locus_tag=PHA55_RS21355;old_locus_tag=PHA55_21350
NZ_CP116044.1	Protein Homology	CDS	4383435	4383878	.	-	0	ID=cds-WP_000449030.1;Parent=gene-PHA55_RS21355;Dbxref=Genbank:WP_000449030.1;Name=WP_000449030.1;gbkey=CDS;gene=yhbP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417623.1;locus_tag=PHA55_RS21355;product=YhbP family protein;protein_id=WP_000449030.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4383929	4384231	.	+	.	ID=gene-PHA55_RS21360;Name=yhbQ;gbkey=Gene;gene=yhbQ;gene_biotype=protein_coding;locus_tag=PHA55_RS21360;old_locus_tag=PHA55_21355
NZ_CP116044.1	Protein Homology	CDS	4383929	4384231	.	+	0	ID=cds-WP_000189314.1;Parent=gene-PHA55_RS21360;Dbxref=Genbank:WP_000189314.1;Name=WP_000189314.1;gbkey=CDS;gene=yhbQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708956.2;locus_tag=PHA55_RS21360;product=DNA damage response exodeoxyribonuclease YhbQ;protein_id=WP_000189314.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4384218	4384721	.	-	.	ID=gene-PHA55_RS21365;Name=yhbS;gbkey=Gene;gene=yhbS;gene_biotype=protein_coding;locus_tag=PHA55_RS21365;old_locus_tag=PHA55_21360
NZ_CP116044.1	Protein Homology	CDS	4384218	4384721	.	-	0	ID=cds-WP_000908554.1;Parent=gene-PHA55_RS21365;Dbxref=Genbank:WP_000908554.1;Name=WP_000908554.1;gbkey=CDS;gene=yhbS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312064.1;locus_tag=PHA55_RS21365;product=N-acetyltransferase;protein_id=WP_000908554.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4384715	4385239	.	-	.	ID=gene-PHA55_RS21370;Name=ubiT;gbkey=Gene;gene=ubiT;gene_biotype=protein_coding;locus_tag=PHA55_RS21370;old_locus_tag=PHA55_21365
NZ_CP116044.1	Protein Homology	CDS	4384715	4385239	.	-	0	ID=cds-WP_271287475.1;Parent=gene-PHA55_RS21370;Dbxref=Genbank:WP_271287475.1;Name=WP_271287475.1;gbkey=CDS;gene=ubiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312065.1;locus_tag=PHA55_RS21370;product=SCP2 domain-containing protein;protein_id=WP_271287475.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4385448	4386443	.	+	.	ID=gene-PHA55_RS21375;Name=ubiU;gbkey=Gene;gene=ubiU;gene_biotype=protein_coding;locus_tag=PHA55_RS21375;old_locus_tag=PHA55_21370
NZ_CP116044.1	Protein Homology	CDS	4385448	4386443	.	+	0	ID=cds-WP_001298771.1;Parent=gene-PHA55_RS21375;Dbxref=Genbank:WP_001298771.1;Name=WP_001298771.1;gbkey=CDS;gene=ubiU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=PHA55_RS21375;product=peptidase U32 family protein;protein_id=WP_001298771.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4386452	4387330	.	+	.	ID=gene-PHA55_RS21380;Name=ubiV;gbkey=Gene;gene=ubiV;gene_biotype=protein_coding;locus_tag=PHA55_RS21380;old_locus_tag=PHA55_21375
NZ_CP116044.1	Protein Homology	CDS	4386452	4387330	.	+	0	ID=cds-WP_001297426.1;Parent=gene-PHA55_RS21380;Dbxref=Genbank:WP_001297426.1;Name=WP_001297426.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiV;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312067.2;locus_tag=PHA55_RS21380;product=U32 family peptidase;protein_id=WP_001297426.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4387536	4388543	.	+	.	ID=gene-PHA55_RS21385;Name=yhbW;gbkey=Gene;gene=yhbW;gene_biotype=protein_coding;locus_tag=PHA55_RS21385;old_locus_tag=PHA55_21380
NZ_CP116044.1	Protein Homology	CDS	4387536	4388543	.	+	0	ID=cds-WP_000130380.1;Parent=gene-PHA55_RS21385;Dbxref=Genbank:WP_000130380.1;Name=WP_000130380.1;Ontology_term=GO:0016705;gbkey=CDS;gene=yhbW;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417629.1;locus_tag=PHA55_RS21385;product=luciferase-like monooxygenase;protein_id=WP_000130380.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4388661	4389905	.	-	.	ID=gene-PHA55_RS21390;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=PHA55_RS21390;old_locus_tag=PHA55_21385
NZ_CP116044.1	Protein Homology	CDS	4388661	4389905	.	-	0	ID=cds-WP_000224340.1;Parent=gene-PHA55_RS21390;Dbxref=Genbank:WP_000224340.1;Name=WP_000224340.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=mtr;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312069.1;locus_tag=PHA55_RS21390;product=tryptophan permease;protein_id=WP_000224340.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4390059	4391948	.	-	.	ID=gene-PHA55_RS21395;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=PHA55_RS21395;old_locus_tag=PHA55_21390
NZ_CP116044.1	Protein Homology	CDS	4390059	4391948	.	-	0	ID=cds-WP_001297428.1;Parent=gene-PHA55_RS21395;Dbxref=Genbank:WP_001297428.1;Name=WP_001297428.1;gbkey=CDS;gene=deaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417631.2;locus_tag=PHA55_RS21395;product=ATP-dependent RNA helicase DeaD;protein_id=WP_001297428.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4391941	4392021	.	-	.	ID=gene-PHA55_RS21400;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=PHA55_RS21400;old_locus_tag=PHA55_21395
NZ_CP116044.1	Protein Homology	CDS	4391941	4392021	.	-	0	ID=cds-WP_010723222.1;Parent=gene-PHA55_RS21400;Dbxref=Genbank:WP_010723222.1;Name=WP_010723222.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791258.1;locus_tag=PHA55_RS21400;product=protein YrbN;protein_id=WP_010723222.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4392128	4393012	.	-	.	ID=gene-PHA55_RS21405;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=PHA55_RS21405;old_locus_tag=PHA55_21400
NZ_CP116044.1	Protein Homology	CDS	4392128	4393012	.	-	0	ID=cds-WP_000802080.1;Parent=gene-PHA55_RS21405;Dbxref=Genbank:WP_000802080.1;Name=WP_000802080.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=PHA55_RS21405;product=lipoprotein NlpI;protein_id=WP_000802080.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4393121	4395256	.	-	.	ID=gene-PHA55_RS21410;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=PHA55_RS21410;old_locus_tag=PHA55_21405
NZ_CP116044.1	Protein Homology	CDS	4393121	4395256	.	-	0	ID=cds-WP_001298740.1;Parent=gene-PHA55_RS21410;Dbxref=Genbank:WP_001298740.1;Name=WP_001298740.1;Ontology_term=GO:0006402,GO:0004654;gbkey=CDS;gene=pnp;go_function=polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312072.2;locus_tag=PHA55_RS21410;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_001298740.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4395503	4395772	.	-	.	ID=gene-PHA55_RS21415;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=PHA55_RS21415;old_locus_tag=PHA55_21410
NZ_CP116044.1	Protein Homology	CDS	4395503	4395772	.	-	0	ID=cds-WP_000059466.1;Parent=gene-PHA55_RS21415;Dbxref=Genbank:WP_000059466.1;Name=WP_000059466.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsO;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=PHA55_RS21415;product=30S ribosomal protein S15;protein_id=WP_000059466.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4395921	4396865	.	-	.	ID=gene-PHA55_RS21420;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=PHA55_RS21420;old_locus_tag=PHA55_21415
NZ_CP116044.1	Protein Homology	CDS	4395921	4396865	.	-	0	ID=cds-WP_000089698.1;Parent=gene-PHA55_RS21420;Dbxref=Genbank:WP_000089698.1;Name=WP_000089698.1;Ontology_term=GO:0006400,GO:0004730;gbkey=CDS;gene=truB;go_function=pseudouridylate synthase activity|0004730||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312074.1;locus_tag=PHA55_RS21420;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_000089698.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4396865	4397266	.	-	.	ID=gene-PHA55_RS21425;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=PHA55_RS21425;old_locus_tag=PHA55_21420
NZ_CP116044.1	Protein Homology	CDS	4396865	4397266	.	-	0	ID=cds-WP_001040205.1;Parent=gene-PHA55_RS21425;Dbxref=Genbank:WP_001040205.1;Name=WP_001040205.1;Ontology_term=GO:0006396,GO:0019843;gbkey=CDS;gene=rbfA;go_function=rRNA binding|0019843||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1;locus_tag=PHA55_RS21425;product=30S ribosome-binding factor RbfA;protein_id=WP_001040205.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4397430	4400102	.	-	.	ID=gene-PHA55_RS21430;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=PHA55_RS21430;old_locus_tag=PHA55_21425
NZ_CP116044.1	Protein Homology	CDS	4397430	4400102	.	-	0	ID=cds-WP_000133044.1;Parent=gene-PHA55_RS21430;Dbxref=Genbank:WP_000133044.1;Name=WP_000133044.1;Ontology_term=GO:0006413,GO:0003743,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312076.1;locus_tag=PHA55_RS21430;product=translation initiation factor IF-2;protein_id=WP_000133044.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4400127	4401614	.	-	.	ID=gene-PHA55_RS21435;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=PHA55_RS21435;old_locus_tag=PHA55_21430
NZ_CP116044.1	Protein Homology	CDS	4400127	4401614	.	-	0	ID=cds-WP_001031057.1;Parent=gene-PHA55_RS21435;Dbxref=Genbank:WP_001031057.1;Name=WP_001031057.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=PHA55_RS21435;product=transcription termination factor NusA;protein_id=WP_001031057.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4401642	4402094	.	-	.	ID=gene-PHA55_RS21440;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=PHA55_RS21440;old_locus_tag=PHA55_21435
NZ_CP116044.1	Protein Homology	CDS	4401642	4402094	.	-	0	ID=cds-WP_001300397.1;Parent=gene-PHA55_RS21440;Dbxref=Genbank:WP_001300397.1;Name=WP_001300397.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=PHA55_RS21440;product=ribosome maturation factor RimP;protein_id=WP_001300397.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4402301	4402377	.	-	.	ID=gene-PHA55_RS21445;Name=PHA55_RS21445;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS21445;old_locus_tag=PHA55_21440
NZ_CP116044.1	tRNAscan-SE	tRNA	4402301	4402377	.	-	.	ID=rna-PHA55_RS21445;Parent=gene-PHA55_RS21445;anticodon=(pos:complement(4402341..4402343));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS21445;product=tRNA-Met
NZ_CP116044.1	tRNAscan-SE	exon	4402301	4402377	.	-	.	ID=exon-PHA55_RS21445-1;Parent=rna-PHA55_RS21445;anticodon=(pos:complement(4402341..4402343));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS21445;product=tRNA-Met
NZ_CP116044.1	RefSeq	gene	4402725	4404068	.	+	.	ID=gene-PHA55_RS21450;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=PHA55_RS21450;old_locus_tag=PHA55_21445
NZ_CP116044.1	Protein Homology	CDS	4402725	4404068	.	+	0	ID=cds-WP_000207683.1;Parent=gene-PHA55_RS21450;Dbxref=Genbank:WP_000207683.1;Name=WP_000207683.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417640.1;locus_tag=PHA55_RS21450;product=argininosuccinate synthase;protein_id=WP_000207683.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4404076	4405701	.	-	.	ID=gene-PHA55_RS21455;Name=yhbX;gbkey=Gene;gene=yhbX;gene_biotype=protein_coding;locus_tag=PHA55_RS21455;old_locus_tag=PHA55_21450
NZ_CP116044.1	Protein Homology	CDS	4404076	4405701	.	-	0	ID=cds-WP_271287476.1;Parent=gene-PHA55_RS21455;Dbxref=Genbank:WP_271287476.1;Name=WP_271287476.1;gbkey=CDS;gene=yhbX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417641.4;locus_tag=PHA55_RS21455;product=phosphoethanolamine transferase;protein_id=WP_271287476.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4406160	4406246	.	-	.	ID=gene-PHA55_RS21460;Name=PHA55_RS21460;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS21460;old_locus_tag=PHA55_21455
NZ_CP116044.1	tRNAscan-SE	tRNA	4406160	4406246	.	-	.	ID=rna-PHA55_RS21460;Parent=gene-PHA55_RS21460;anticodon=(pos:complement(4406210..4406212));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS21460;product=tRNA-Leu
NZ_CP116044.1	tRNAscan-SE	exon	4406160	4406246	.	-	.	ID=exon-PHA55_RS21460-1;Parent=rna-PHA55_RS21460;anticodon=(pos:complement(4406210..4406212));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS21460;product=tRNA-Leu
NZ_CP116044.1	RefSeq	gene	4406261	4406593	.	-	.	ID=gene-PHA55_RS21465;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=PHA55_RS21465;old_locus_tag=PHA55_21460
NZ_CP116044.1	Protein Homology	CDS	4406261	4406593	.	-	0	ID=cds-WP_001297427.1;Parent=gene-PHA55_RS21465;Dbxref=Genbank:WP_001297427.1;Name=WP_001297427.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secG;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312081.1;locus_tag=PHA55_RS21465;product=preprotein translocase subunit SecG;protein_id=WP_001297427.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4406821	4408158	.	-	.	ID=gene-PHA55_RS21470;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=PHA55_RS21470;old_locus_tag=PHA55_21465
NZ_CP116044.1	Protein Homology	CDS	4406821	4408158	.	-	0	ID=cds-WP_000071134.1;Parent=gene-PHA55_RS21470;Dbxref=Genbank:WP_000071134.1;Name=WP_000071134.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular transferase activity%2C phosphotransferases|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417643.1;locus_tag=PHA55_RS21470;product=phosphoglucosamine mutase;protein_id=WP_000071134.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4408151	4408999	.	-	.	ID=gene-PHA55_RS21475;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=PHA55_RS21475;old_locus_tag=PHA55_21470
NZ_CP116044.1	Protein Homology	CDS	4408151	4408999	.	-	0	ID=cds-WP_000764731.1;Parent=gene-PHA55_RS21475;Dbxref=Genbank:WP_000764731.1;Name=WP_000764731.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312083.2;locus_tag=PHA55_RS21475;product=dihydropteroate synthase;protein_id=WP_000764731.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4409089	4411023	.	-	.	ID=gene-PHA55_RS21480;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=PHA55_RS21480;old_locus_tag=PHA55_21475
NZ_CP116044.1	Protein Homology	CDS	4409089	4411023	.	-	0	ID=cds-WP_001107467.1;Parent=gene-PHA55_RS21480;Dbxref=Genbank:WP_001107467.1;Name=WP_001107467.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=PHA55_RS21480;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_001107467.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4411123	4411752	.	-	.	ID=gene-PHA55_RS21485;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=PHA55_RS21485;old_locus_tag=PHA55_21480
NZ_CP116044.1	Protein Homology	CDS	4411123	4411752	.	-	0	ID=cds-WP_000145975.1;Parent=gene-PHA55_RS21485;Dbxref=Genbank:WP_000145975.1;Name=WP_000145975.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312085.1;locus_tag=PHA55_RS21485;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_000145975.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4411878	4412171	.	+	.	ID=gene-PHA55_RS21490;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=PHA55_RS21490;old_locus_tag=PHA55_21485
NZ_CP116044.1	Protein Homology	CDS	4411878	4412171	.	+	0	ID=cds-WP_001054420.1;Parent=gene-PHA55_RS21490;Dbxref=Genbank:WP_001054420.1;Name=WP_001054420.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=PHA55_RS21490;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_001054420.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4412327	4412803	.	-	.	ID=gene-PHA55_RS21495;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=PHA55_RS21495;old_locus_tag=PHA55_21490
NZ_CP116044.1	Protein Homology	CDS	4412327	4412803	.	-	0	ID=cds-WP_001148001.1;Parent=gene-PHA55_RS21495;Dbxref=Genbank:WP_001148001.1;Name=WP_001148001.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=PHA55_RS21495;product=transcription elongation factor GreA;protein_id=WP_001148001.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4413051	4414484	.	+	.	ID=gene-PHA55_RS21500;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=PHA55_RS21500;old_locus_tag=PHA55_21495
NZ_CP116044.1	Protein Homology	CDS	4413051	4414484	.	+	0	ID=cds-WP_001212655.1;Parent=gene-PHA55_RS21500;Dbxref=Genbank:WP_001212655.1;Name=WP_001212655.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001212660.1;locus_tag=PHA55_RS21500;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_001212655.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4414524	4415696	.	-	.	ID=gene-PHA55_RS21505;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=PHA55_RS21505;old_locus_tag=PHA55_21500
NZ_CP116044.1	Protein Homology	CDS	4414524	4415696	.	-	0	ID=cds-WP_000673561.1;Parent=gene-PHA55_RS21505;Dbxref=Genbank:WP_000673561.1;Name=WP_000673561.1;Ontology_term=GO:0042254,GO:0005525;gbkey=CDS;gene=cgtA;go_function=GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708982.1;locus_tag=PHA55_RS21505;product=Obg family GTPase CgtA;protein_id=WP_000673561.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4415712	4416677	.	-	.	ID=gene-PHA55_RS21510;Name=yhbE;gbkey=Gene;gene=yhbE;gene_biotype=protein_coding;locus_tag=PHA55_RS21510;old_locus_tag=PHA55_21505
NZ_CP116044.1	Protein Homology	CDS	4415712	4416677	.	-	0	ID=cds-WP_000813037.1;Parent=gene-PHA55_RS21510;Dbxref=Genbank:WP_000813037.1;Name=WP_000813037.1;gbkey=CDS;gene=yhbE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=PHA55_RS21510;product=DMT family transporter;protein_id=WP_000813037.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4416804	4417061	.	-	.	ID=gene-PHA55_RS21515;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=PHA55_RS21515;old_locus_tag=PHA55_21510
NZ_CP116044.1	Protein Homology	CDS	4416804	4417061	.	-	0	ID=cds-WP_000940595.1;Parent=gene-PHA55_RS21515;Dbxref=Genbank:WP_000940595.1;Name=WP_000940595.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=PHA55_RS21515;product=50S ribosomal protein L27;protein_id=WP_000940595.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4417082	4417393	.	-	.	ID=gene-PHA55_RS21520;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=PHA55_RS21520;old_locus_tag=PHA55_21515
NZ_CP116044.1	Protein Homology	CDS	4417082	4417393	.	-	0	ID=cds-WP_000271401.1;Parent=gene-PHA55_RS21520;Dbxref=Genbank:WP_000271401.1;Name=WP_000271401.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplU;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=PHA55_RS21520;product=50S ribosomal protein L21;protein_id=WP_000271401.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4417652	4418623	.	+	.	ID=gene-PHA55_RS21525;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=PHA55_RS21525;old_locus_tag=PHA55_21520
NZ_CP116044.1	Protein Homology	CDS	4417652	4418623	.	+	0	ID=cds-WP_001047336.1;Parent=gene-PHA55_RS21525;Dbxref=Genbank:WP_001047336.1;Name=WP_001047336.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417654.1;locus_tag=PHA55_RS21525;product=octaprenyl diphosphate synthase;protein_id=WP_001047336.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4418851	4419129	.	+	.	ID=gene-PHA55_RS21530;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;locus_tag=PHA55_RS21530;old_locus_tag=PHA55_21525
NZ_CP116044.1	Protein Homology	CDS	4418851	4419129	.	+	0	ID=cds-WP_000445413.1;Parent=gene-PHA55_RS21530;Dbxref=Genbank:WP_000445413.1;Name=WP_000445413.1;gbkey=CDS;gene=sfsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417655.1;locus_tag=PHA55_RS21530;product=DNA-binding transcriptional regulator SfsB;protein_id=WP_000445413.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4419177	4420436	.	-	.	ID=gene-PHA55_RS21535;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=PHA55_RS21535;old_locus_tag=PHA55_21530
NZ_CP116044.1	Protein Homology	CDS	4419177	4420436	.	-	0	ID=cds-WP_000357259.1;Parent=gene-PHA55_RS21535;Dbxref=Genbank:WP_000357259.1;Name=WP_000357259.1;Ontology_term=GO:0009252,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417656.1;locus_tag=PHA55_RS21535;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_000357259.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4420491	4420745	.	-	.	ID=gene-PHA55_RS21540;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=PHA55_RS21540;old_locus_tag=PHA55_21535
NZ_CP116044.1	Protein Homology	CDS	4420491	4420745	.	-	0	ID=cds-WP_000429656.1;Parent=gene-PHA55_RS21540;Dbxref=Genbank:WP_000429656.1;Name=WP_000429656.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417657.2;locus_tag=PHA55_RS21540;product=BolA family iron metabolism protein IbaG;protein_id=WP_000429656.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4420905	4421198	.	-	.	ID=gene-PHA55_RS21545;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=PHA55_RS21545;old_locus_tag=PHA55_21540
NZ_CP116044.1	Protein Homology	CDS	4420905	4421198	.	-	0	ID=cds-WP_000004488.1;Parent=gene-PHA55_RS21545;Dbxref=Genbank:WP_000004488.1;Name=WP_000004488.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312097.2;locus_tag=PHA55_RS21545;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_000004488.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4421198	4421833	.	-	.	ID=gene-PHA55_RS21550;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=PHA55_RS21550;old_locus_tag=PHA55_21545
NZ_CP116044.1	Protein Homology	CDS	4421198	4421833	.	-	0	ID=cds-WP_000476487.1;Parent=gene-PHA55_RS21550;Dbxref=Genbank:WP_000476487.1;Name=WP_000476487.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417659.1;locus_tag=PHA55_RS21550;product=phospholipid-binding protein MlaC;protein_id=WP_000476487.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4421852	4422403	.	-	.	ID=gene-PHA55_RS21555;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=PHA55_RS21555;old_locus_tag=PHA55_21550
NZ_CP116044.1	Protein Homology	CDS	4421852	4422403	.	-	0	ID=cds-WP_001296448.1;Parent=gene-PHA55_RS21555;Dbxref=Genbank:WP_001296448.1;Name=WP_001296448.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312099.1;locus_tag=PHA55_RS21555;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_001296448.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4422408	4423190	.	-	.	ID=gene-PHA55_RS21560;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=PHA55_RS21560;old_locus_tag=PHA55_21555
NZ_CP116044.1	Protein Homology	CDS	4422408	4423190	.	-	0	ID=cds-WP_000925795.1;Parent=gene-PHA55_RS21560;Dbxref=Genbank:WP_000925795.1;Name=WP_000925795.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=PHA55_RS21560;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_000925795.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4423198	4424007	.	-	.	ID=gene-PHA55_RS21565;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=PHA55_RS21565;old_locus_tag=PHA55_21560
NZ_CP116044.1	Protein Homology	CDS	4423198	4424007	.	-	0	ID=cds-WP_000438245.1;Parent=gene-PHA55_RS21565;Dbxref=Genbank:WP_000438245.1;Name=WP_000438245.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312101.1;locus_tag=PHA55_RS21565;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_000438245.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4424217	4425194	.	+	.	ID=gene-PHA55_RS21570;Name=yrbG;gbkey=Gene;gene=yrbG;gene_biotype=protein_coding;locus_tag=PHA55_RS21570;old_locus_tag=PHA55_21565
NZ_CP116044.1	Protein Homology	CDS	4424217	4425194	.	+	0	ID=cds-WP_000922872.1;Parent=gene-PHA55_RS21570;Dbxref=Genbank:WP_000922872.1;Name=WP_000922872.1;gbkey=CDS;gene=yrbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312102.1;locus_tag=PHA55_RS21570;product=calcium/sodium antiporter;protein_id=WP_000922872.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4425208	4426194	.	+	.	ID=gene-PHA55_RS21575;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=PHA55_RS21575;old_locus_tag=PHA55_21570
NZ_CP116044.1	Protein Homology	CDS	4425208	4426194	.	+	0	ID=cds-WP_001295557.1;Parent=gene-PHA55_RS21575;Dbxref=Genbank:WP_001295557.1;Name=WP_001295557.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417664.1;locus_tag=PHA55_RS21575;product=arabinose-5-phosphate isomerase KdsD;protein_id=WP_001295557.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4426215	4426781	.	+	.	ID=gene-PHA55_RS21580;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=PHA55_RS21580;old_locus_tag=PHA55_21575
NZ_CP116044.1	Protein Homology	CDS	4426215	4426781	.	+	0	ID=cds-WP_000030016.1;Parent=gene-PHA55_RS21580;Dbxref=Genbank:WP_000030016.1;Name=WP_000030016.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708997.1;locus_tag=PHA55_RS21580;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WP_000030016.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4426778	4427353	.	+	.	ID=gene-PHA55_RS21585;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=PHA55_RS21585;old_locus_tag=PHA55_21580
NZ_CP116044.1	Protein Homology	CDS	4426778	4427353	.	+	0	ID=cds-WP_000030537.1;Parent=gene-PHA55_RS21585;Dbxref=Genbank:WP_000030537.1;Name=WP_000030537.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312105.1;locus_tag=PHA55_RS21585;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_000030537.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4427322	4427879	.	+	.	ID=gene-PHA55_RS21590;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=PHA55_RS21590;old_locus_tag=PHA55_21585
NZ_CP116044.1	Protein Homology	CDS	4427322	4427879	.	+	0	ID=cds-WP_000669785.1;Parent=gene-PHA55_RS21590;Dbxref=Genbank:WP_000669785.1;Name=WP_000669785.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312106.1;locus_tag=PHA55_RS21590;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WP_000669785.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4427886	4428611	.	+	.	ID=gene-PHA55_RS21595;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=PHA55_RS21595;old_locus_tag=PHA55_21590
NZ_CP116044.1	Protein Homology	CDS	4427886	4428611	.	+	0	ID=cds-WP_000224099.1;Parent=gene-PHA55_RS21595;Dbxref=Genbank:WP_000224099.1;Name=WP_000224099.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=PHA55_RS21595;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_000224099.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4428659	4430092	.	+	.	ID=gene-PHA55_RS21600;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=PHA55_RS21600;old_locus_tag=PHA55_21595
NZ_CP116044.1	Protein Homology	CDS	4428659	4430092	.	+	0	ID=cds-WP_000809051.1;Parent=gene-PHA55_RS21600;Dbxref=Genbank:WP_000809051.1;Name=WP_000809051.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312108.1;locus_tag=PHA55_RS21600;product=RNA polymerase factor sigma-54;protein_id=WP_000809051.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4430115	4430402	.	+	.	ID=gene-PHA55_RS21605;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=PHA55_RS21605;old_locus_tag=PHA55_21600
NZ_CP116044.1	Protein Homology	CDS	4430115	4430402	.	+	0	ID=cds-WP_001176599.1;Parent=gene-PHA55_RS21605;Dbxref=Genbank:WP_001176599.1;Name=WP_001176599.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312109.1;locus_tag=PHA55_RS21605;product=ribosome hibernation promoting factor;protein_id=WP_001176599.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4430520	4431011	.	+	.	ID=gene-PHA55_RS21610;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=PHA55_RS21610;old_locus_tag=PHA55_21605
NZ_CP116044.1	Protein Homology	CDS	4430520	4431011	.	+	0	ID=cds-WP_000183676.1;Parent=gene-PHA55_RS21610;Dbxref=Genbank:WP_000183676.1;Name=WP_000183676.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417671.1;locus_tag=PHA55_RS21610;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WP_000183676.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4431057	4431911	.	+	.	ID=gene-PHA55_RS21615;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=PHA55_RS21615;old_locus_tag=PHA55_21610
NZ_CP116044.1	Protein Homology	CDS	4431057	4431911	.	+	0	ID=cds-WP_000243741.1;Parent=gene-PHA55_RS21615;Dbxref=Genbank:WP_000243741.1;Name=WP_000243741.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312111.1;locus_tag=PHA55_RS21615;product=RNase adapter RapZ;protein_id=WP_000243741.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4431908	4432180	.	+	.	ID=gene-PHA55_RS21620;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=PHA55_RS21620;old_locus_tag=PHA55_21615
NZ_CP116044.1	Protein Homology	CDS	4431908	4432180	.	+	0	ID=cds-WP_000216791.1;Parent=gene-PHA55_RS21620;Dbxref=Genbank:WP_000216791.1;Name=WP_000216791.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=PHA55_RS21620;product=PTS phosphocarrier protein NPr;protein_id=WP_000216791.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4432394	4433026	.	+	.	ID=gene-PHA55_RS21625;Name=yrbL;gbkey=Gene;gene=yrbL;gene_biotype=protein_coding;locus_tag=PHA55_RS21625;old_locus_tag=PHA55_21620
NZ_CP116044.1	Protein Homology	CDS	4432394	4433026	.	+	0	ID=cds-WP_000620387.1;Parent=gene-PHA55_RS21625;Dbxref=Genbank:WP_000620387.1;Name=WP_000620387.1;gbkey=CDS;gene=yrbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417674.1;locus_tag=PHA55_RS21625;product=PhoP regulatory network protein YrbL;protein_id=WP_000620387.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4433023	4433751	.	-	.	ID=gene-PHA55_RS21630;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=PHA55_RS21630;old_locus_tag=PHA55_21625
NZ_CP116044.1	Protein Homology	CDS	4433023	4433751	.	-	0	ID=cds-WP_000047091.1;Parent=gene-PHA55_RS21630;Dbxref=Genbank:WP_000047091.1;Name=WP_000047091.1;Ontology_term=GO:0009252,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417675.1;locus_tag=PHA55_RS21630;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_000047091.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4433748	4434401	.	-	.	ID=gene-PHA55_RS21635;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=PHA55_RS21635;old_locus_tag=PHA55_21630
NZ_CP116044.1	Protein Homology	CDS	4433748	4434401	.	-	0	ID=cds-WP_001299134.1;Parent=gene-PHA55_RS21635;Dbxref=Genbank:WP_001299134.1;Name=WP_001299134.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709007.2;locus_tag=PHA55_RS21635;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WP_001299134.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4434631	4436967	.	-	.	ID=gene-PHA55_RS21640;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=PHA55_RS21640;old_locus_tag=PHA55_21635
NZ_CP116044.1	Protein Homology	CDS	4434631	4436967	.	-	0	ID=cds-WP_000809774.1;Parent=gene-PHA55_RS21640;Dbxref=Genbank:WP_000809774.1;Name=WP_000809774.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709008.1;locus_tag=PHA55_RS21640;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=WP_000809774.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4437063	4437992	.	-	.	ID=gene-PHA55_RS21645;Name=yhcC;gbkey=Gene;gene=yhcC;gene_biotype=protein_coding;locus_tag=PHA55_RS21645;old_locus_tag=PHA55_21640
NZ_CP116044.1	Protein Homology	CDS	4437063	4437992	.	-	0	ID=cds-WP_001176896.1;Parent=gene-PHA55_RS21645;Dbxref=Genbank:WP_001176896.1;Name=WP_001176896.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:1904047;gbkey=CDS;gene=yhcC;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312117.1;locus_tag=PHA55_RS21645;product=TIGR01212 family radical SAM protein;protein_id=WP_001176896.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4438667	4443127	.	+	.	ID=gene-PHA55_RS21650;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=PHA55_RS21650;old_locus_tag=PHA55_21645
NZ_CP116044.1	Protein Homology	CDS	4438667	4443127	.	+	0	ID=cds-WP_001364217.1;Parent=gene-PHA55_RS21650;Dbxref=Genbank:WP_001364217.1;Name=WP_001364217.1;Ontology_term=GO:0006537,GO:0006807,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=PHA55_RS21650;product=glutamate synthase large subunit;protein_id=WP_001364217.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4443140	4444558	.	+	.	ID=gene-PHA55_RS21655;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=PHA55_RS21655;old_locus_tag=PHA55_21650
NZ_CP116044.1	Protein Homology	CDS	4443140	4444558	.	+	0	ID=cds-WP_000081674.1;Parent=gene-PHA55_RS21655;Dbxref=Genbank:WP_000081674.1;Name=WP_000081674.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=PHA55_RS21655;product=glutamate synthase subunit GltD;protein_id=WP_000081674.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4444742	4445869	.	+	.	ID=gene-PHA55_RS21660;Name=yhcG;gbkey=Gene;gene=yhcG;gene_biotype=protein_coding;locus_tag=PHA55_RS21660;old_locus_tag=PHA55_21655
NZ_CP116044.1	Protein Homology	CDS	4444742	4445869	.	+	0	ID=cds-WP_000445144.1;Parent=gene-PHA55_RS21660;Dbxref=Genbank:WP_000445144.1;Name=WP_000445144.1;gbkey=CDS;gene=yhcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312120.1;locus_tag=PHA55_RS21660;product=PDDEXK nuclease domain-containing protein;protein_id=WP_000445144.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4445929	4446393	.	-	.	ID=gene-PHA55_RS21665;Name=nanQ;gbkey=Gene;gene=nanQ;gene_biotype=protein_coding;locus_tag=PHA55_RS21665;old_locus_tag=PHA55_21660
NZ_CP116044.1	Protein Homology	CDS	4445929	4446393	.	-	0	ID=cds-WP_000979882.1;Parent=gene-PHA55_RS21665;Dbxref=Genbank:WP_000979882.1;Name=WP_000979882.1;Ontology_term=GO:0006974;gbkey=CDS;gene=nanQ;go_process=cellular response to DNA damage stimulus|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417688.1;locus_tag=PHA55_RS21665;product=N-acetylneuraminate anomerase;protein_id=WP_000979882.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4446390	4447265	.	-	.	ID=gene-PHA55_RS21670;Name=nanK;gbkey=Gene;gene=nanK;gene_biotype=protein_coding;locus_tag=PHA55_RS21670;old_locus_tag=PHA55_21665
NZ_CP116044.1	Protein Homology	CDS	4446390	4447265	.	-	0	ID=cds-WP_000209003.1;Parent=gene-PHA55_RS21670;Dbxref=Genbank:WP_000209003.1;Name=WP_000209003.1;gbkey=CDS;gene=nanK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312122.2;locus_tag=PHA55_RS21670;product=N-acetylmannosamine kinase;protein_id=WP_000209003.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4447262	4447951	.	-	.	ID=gene-PHA55_RS21675;Name=nanE;gbkey=Gene;gene=nanE;gene_biotype=protein_coding;locus_tag=PHA55_RS21675;old_locus_tag=PHA55_21670
NZ_CP116044.1	Protein Homology	CDS	4447262	4447951	.	-	0	ID=cds-WP_000054239.1;Parent=gene-PHA55_RS21675;Dbxref=Genbank:WP_000054239.1;Name=WP_000054239.1;gbkey=CDS;gene=nanE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417690.1;locus_tag=PHA55_RS21675;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_000054239.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4447999	4449489	.	-	.	ID=gene-PHA55_RS21680;Name=nanT;gbkey=Gene;gene=nanT;gene_biotype=protein_coding;locus_tag=PHA55_RS21680;old_locus_tag=PHA55_21675
NZ_CP116044.1	Protein Homology	CDS	4447999	4449489	.	-	0	ID=cds-WP_000108459.1;Parent=gene-PHA55_RS21680;Dbxref=Genbank:WP_000108459.1;Name=WP_000108459.1;gbkey=CDS;gene=nanT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312124.2;locus_tag=PHA55_RS21680;product=sialic acid transporter NanT;protein_id=WP_000108459.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4449598	4450491	.	-	.	ID=gene-PHA55_RS21685;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=PHA55_RS21685;old_locus_tag=PHA55_21680
NZ_CP116044.1	Protein Homology	CDS	4449598	4450491	.	-	0	ID=cds-WP_000224721.1;Parent=gene-PHA55_RS21685;Dbxref=Genbank:WP_000224721.1;Name=WP_000224721.1;Ontology_term=GO:0006040,GO:0009273,GO:0008747;gbkey=CDS;gene=nanA;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan-based cell wall biogenesis|0009273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312125.1;locus_tag=PHA55_RS21685;product=N-acetylneuraminate lyase;protein_id=WP_000224721.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4450613	4451404	.	-	.	ID=gene-PHA55_RS21690;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;locus_tag=PHA55_RS21690;old_locus_tag=PHA55_21685
NZ_CP116044.1	Protein Homology	CDS	4450613	4451404	.	-	0	ID=cds-WP_000523844.1;Parent=gene-PHA55_RS21690;Dbxref=Genbank:WP_000523844.1;Name=WP_000523844.1;gbkey=CDS;gene=nanR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312126.3;locus_tag=PHA55_RS21690;product=transcriptional regulator NanR;protein_id=WP_000523844.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4451784	4453151	.	+	.	ID=gene-PHA55_RS21695;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=PHA55_RS21695;old_locus_tag=PHA55_21690
NZ_CP116044.1	Protein Homology	CDS	4451784	4453151	.	+	0	ID=cds-WP_000467002.1;Parent=gene-PHA55_RS21695;Dbxref=Genbank:WP_000467002.1;Name=WP_000467002.1;gbkey=CDS;gene=dcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417694.1;locus_tag=PHA55_RS21695;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_000467002.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4453194	4453691	.	-	.	ID=gene-PHA55_RS21700;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=PHA55_RS21700;old_locus_tag=PHA55_21695
NZ_CP116044.1	Protein Homology	CDS	4453194	4453691	.	-	0	ID=cds-WP_000366129.1;Parent=gene-PHA55_RS21700;Dbxref=Genbank:WP_000366129.1;Name=WP_000366129.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312128.1;locus_tag=PHA55_RS21700;product=ClpXP protease specificity-enhancing factor;protein_id=WP_000366129.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4453697	4454335	.	-	.	ID=gene-PHA55_RS21705;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=PHA55_RS21705;old_locus_tag=PHA55_21700
NZ_CP116044.1	Protein Homology	CDS	4453697	4454335	.	-	0	ID=cds-WP_000257293.1;Parent=gene-PHA55_RS21705;Dbxref=Genbank:WP_000257293.1;Name=WP_000257293.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312129.1;locus_tag=PHA55_RS21705;product=stringent starvation protein A;protein_id=WP_000257293.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4454730	4455122	.	-	.	ID=gene-PHA55_RS21710;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=PHA55_RS21710;old_locus_tag=PHA55_21705
NZ_CP116044.1	Protein Homology	CDS	4454730	4455122	.	-	0	ID=cds-WP_000829818.1;Parent=gene-PHA55_RS21710;Dbxref=Genbank:WP_000829818.1;Name=WP_000829818.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=PHA55_RS21710;product=30S ribosomal protein S9;protein_id=WP_000829818.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4455138	4455566	.	-	.	ID=gene-PHA55_RS21715;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=PHA55_RS21715;old_locus_tag=PHA55_21710
NZ_CP116044.1	Protein Homology	CDS	4455138	4455566	.	-	0	ID=cds-WP_000847559.1;Parent=gene-PHA55_RS21715;Dbxref=Genbank:WP_000847559.1;Name=WP_000847559.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplM;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=PHA55_RS21715;product=50S ribosomal protein L13;protein_id=WP_000847559.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4455785	4456912	.	-	.	ID=gene-PHA55_RS21720;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=PHA55_RS21720;old_locus_tag=PHA55_21715
NZ_CP116044.1	Protein Homology	CDS	4455785	4456912	.	-	0	ID=cds-WP_001192340.1;Parent=gene-PHA55_RS21720;Dbxref=Genbank:WP_001192340.1;Name=WP_001192340.1;gbkey=CDS;gene=zapE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312132.1;locus_tag=PHA55_RS21720;product=cell division protein ZapE;protein_id=WP_001192340.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4457106	4457504	.	+	.	ID=gene-PHA55_RS21725;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=PHA55_RS21725;old_locus_tag=PHA55_21720
NZ_CP116044.1	Protein Homology	CDS	4457106	4457504	.	+	0	ID=cds-WP_001295270.1;Parent=gene-PHA55_RS21725;Dbxref=Genbank:WP_001295270.1;Name=WP_001295270.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121352.1;locus_tag=PHA55_RS21725;product=Z-ring associated protein ZapG;protein_id=WP_001295270.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4457658	4459025	.	+	.	ID=gene-PHA55_RS21730;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=PHA55_RS21730;old_locus_tag=PHA55_21725
NZ_CP116044.1	Protein Homology	CDS	4457658	4459025	.	+	0	ID=cds-WP_001295271.1;Parent=gene-PHA55_RS21730;Dbxref=Genbank:WP_001295271.1;Name=WP_001295271.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=degQ;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417701.1;locus_tag=PHA55_RS21730;product=serine endoprotease DegQ;protein_id=WP_001295271.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4459115	4460182	.	+	.	ID=gene-PHA55_RS21735;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=PHA55_RS21735;old_locus_tag=PHA55_21730
NZ_CP116044.1	Protein Homology	CDS	4459115	4460182	.	+	0	ID=cds-WP_000497723.1;Parent=gene-PHA55_RS21735;Dbxref=Genbank:WP_000497723.1;Name=WP_000497723.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312135.1;locus_tag=PHA55_RS21735;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WP_000497723.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4460245	4461183	.	-	.	ID=gene-PHA55_RS21740;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=PHA55_RS21740;old_locus_tag=PHA55_21735
NZ_CP116044.1	Protein Homology	CDS	4460245	4461183	.	-	0	ID=cds-WP_001297453.1;Parent=gene-PHA55_RS21740;Dbxref=Genbank:WP_001297453.1;Name=WP_001297453.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=PHA55_RS21740;product=malate dehydrogenase;protein_id=WP_001297453.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4461618	4462088	.	+	.	ID=gene-PHA55_RS21745;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=PHA55_RS21745;old_locus_tag=PHA55_21740
NZ_CP116044.1	Protein Homology	CDS	4461618	4462088	.	+	0	ID=cds-WP_001257846.1;Parent=gene-PHA55_RS21745;Dbxref=Genbank:WP_001257846.1;Name=WP_001257846.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1;locus_tag=PHA55_RS21745;product=transcriptional regulator ArgR;protein_id=WP_001257846.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4462453	4462716	.	+	.	ID=gene-PHA55_RS21750;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=PHA55_RS21750;old_locus_tag=PHA55_21745
NZ_CP116044.1	Protein Homology	CDS	4462453	4462716	.	+	0	ID=cds-WP_000695690.1;Parent=gene-PHA55_RS21750;Dbxref=Genbank:WP_000695690.1;Name=WP_000695690.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417705.2;locus_tag=PHA55_RS21750;product=peroxide/acid stress response protein YhcN;protein_id=WP_000695690.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4462772	4463044	.	-	.	ID=gene-PHA55_RS21755;Name=yhcO;gbkey=Gene;gene=yhcO;gene_biotype=protein_coding;locus_tag=PHA55_RS21755;old_locus_tag=PHA55_21750
NZ_CP116044.1	Protein Homology	CDS	4462772	4463044	.	-	0	ID=cds-WP_001029013.1;Parent=gene-PHA55_RS21755;Dbxref=Genbank:WP_001029013.1;Name=WP_001029013.1;gbkey=CDS;gene=yhcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312139.1;locus_tag=PHA55_RS21755;product=barstar family protein;protein_id=WP_001029013.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4463136	4465103	.	-	.	ID=gene-PHA55_RS21760;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=PHA55_RS21760;old_locus_tag=PHA55_21755
NZ_CP116044.1	Protein Homology	CDS	4463136	4465103	.	-	0	ID=cds-WP_000510962.1;Parent=gene-PHA55_RS21760;Dbxref=Genbank:WP_000510962.1;Name=WP_000510962.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709037.1;locus_tag=PHA55_RS21760;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_000510962.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4465109	4466041	.	-	.	ID=gene-PHA55_RS21765;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=PHA55_RS21765;old_locus_tag=PHA55_21760
NZ_CP116044.1	Protein Homology	CDS	4465109	4466041	.	-	0	ID=cds-WP_000854033.1;Parent=gene-PHA55_RS21765;Dbxref=Genbank:WP_000854033.1;Name=WP_000854033.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312141.1;locus_tag=PHA55_RS21765;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_000854033.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4466049	4466252	.	-	.	ID=gene-PHA55_RS21770;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=PHA55_RS21770;old_locus_tag=PHA55_21765
NZ_CP116044.1	Protein Homology	CDS	4466049	4466252	.	-	0	ID=cds-WP_000051841.1;Parent=gene-PHA55_RS21770;Dbxref=Genbank:WP_000051841.1;Name=WP_000051841.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=PHA55_RS21770;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=WP_000051841.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4466435	4467364	.	+	.	ID=gene-PHA55_RS21775;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=PHA55_RS21775;old_locus_tag=PHA55_21770
NZ_CP116044.1	Protein Homology	CDS	4466435	4467364	.	+	0	ID=cds-WP_000440317.1;Parent=gene-PHA55_RS21775;Dbxref=Genbank:WP_000440317.1;Name=WP_000440317.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312143.1;locus_tag=PHA55_RS21775;product=HTH-type transcriptional activator AaeR;protein_id=WP_000440317.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4467492	4468937	.	-	.	ID=gene-PHA55_RS21780;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=PHA55_RS21780;old_locus_tag=PHA55_21775
NZ_CP116044.1	Protein Homology	CDS	4467492	4468937	.	-	0	ID=cds-WP_000055909.1;Parent=gene-PHA55_RS21780;Dbxref=Genbank:WP_000055909.1;Name=WP_000055909.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417711.1;locus_tag=PHA55_RS21780;product=metalloprotease TldD;protein_id=WP_000055909.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4469093	4472893	.	-	.	ID=gene-PHA55_RS21785;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=protein_coding;locus_tag=PHA55_RS21785;old_locus_tag=PHA55_21780
NZ_CP116044.1	Protein Homology	CDS	4469093	4472893	.	-	0	ID=cds-WP_001253559.1;Parent=gene-PHA55_RS21785;Dbxref=Genbank:WP_001253559.1;Name=WP_001253559.1;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709041.3;locus_tag=PHA55_RS21785;product=AsmA2 domain-containing protein YhdP;protein_id=WP_001253559.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4472961	4474430	.	-	.	ID=gene-PHA55_RS21790;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=PHA55_RS21790;old_locus_tag=PHA55_21785
NZ_CP116044.1	Protein Homology	CDS	4472961	4474430	.	-	0	ID=cds-WP_000123197.1;Parent=gene-PHA55_RS21790;Dbxref=Genbank:WP_000123197.1;Name=WP_000123197.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,ribonuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=PHA55_RS21790;product=ribonuclease G;protein_id=WP_000123197.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4474420	4475013	.	-	.	ID=gene-PHA55_RS21795;Name=yhdE;gbkey=Gene;gene=yhdE;gene_biotype=protein_coding;locus_tag=PHA55_RS21795;old_locus_tag=PHA55_21790
NZ_CP116044.1	Protein Homology	CDS	4474420	4475013	.	-	0	ID=cds-WP_000203096.1;Parent=gene-PHA55_RS21795;Dbxref=Genbank:WP_000203096.1;Name=WP_000203096.1;gbkey=CDS;gene=yhdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709043.1;locus_tag=PHA55_RS21795;product=nucleoside triphosphate pyrophosphatase YhdE;protein_id=WP_000203096.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4475022	4475510	.	-	.	ID=gene-PHA55_RS21800;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=PHA55_RS21800;old_locus_tag=PHA55_21795
NZ_CP116044.1	Protein Homology	CDS	4475022	4475510	.	-	0	ID=cds-WP_000179409.1;Parent=gene-PHA55_RS21800;Dbxref=Genbank:WP_000179409.1;Name=WP_000179409.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1;locus_tag=PHA55_RS21800;product=rod shape-determining protein MreD;protein_id=WP_000179409.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4475510	4476613	.	-	.	ID=gene-PHA55_RS21805;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=PHA55_RS21805;old_locus_tag=PHA55_21800
NZ_CP116044.1	Protein Homology	CDS	4475510	4476613	.	-	0	ID=cds-WP_000802516.1;Parent=gene-PHA55_RS21805;Dbxref=Genbank:WP_000802516.1;Name=WP_000802516.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312149.1;locus_tag=PHA55_RS21805;product=rod shape-determining protein MreC;protein_id=WP_000802516.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4476679	4477722	.	-	.	ID=gene-PHA55_RS21810;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=PHA55_RS21810;old_locus_tag=PHA55_21805
NZ_CP116044.1	Protein Homology	CDS	4476679	4477722	.	-	0	ID=cds-WP_000913396.1;Parent=gene-PHA55_RS21810;Dbxref=Genbank:WP_000913396.1;Name=WP_000913396.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=PHA55_RS21810;product=rod shape-determining protein MreB;protein_id=WP_000913396.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4478027	4479967	.	-	.	ID=gene-PHA55_RS21815;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=PHA55_RS21815;old_locus_tag=PHA55_21810
NZ_CP116044.1	Protein Homology	CDS	4478027	4479967	.	-	0	ID=cds-WP_028985290.1;Parent=gene-PHA55_RS21815;Dbxref=Genbank:WP_028985290.1;Name=WP_028985290.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417718.1;locus_tag=PHA55_RS21815;product=RNase E specificity factor CsrD;protein_id=WP_028985290.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4480119	4481093	.	+	.	ID=gene-PHA55_RS21820;Name=yhdH;gbkey=Gene;gene=yhdH;gene_biotype=protein_coding;locus_tag=PHA55_RS21820;old_locus_tag=PHA55_21815
NZ_CP116044.1	Protein Homology	CDS	4480119	4481093	.	+	0	ID=cds-WP_001148478.1;Parent=gene-PHA55_RS21820;Dbxref=Genbank:WP_001148478.1;Name=WP_001148478.1;gbkey=CDS;gene=yhdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312152.1;locus_tag=PHA55_RS21820;product=oxidoreductase;protein_id=WP_001148478.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4482071	4482541	.	+	.	ID=gene-PHA55_RS21825;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=PHA55_RS21825;old_locus_tag=PHA55_21820
NZ_CP116044.1	Protein Homology	CDS	4482071	4482541	.	+	0	ID=cds-WP_000354622.1;Parent=gene-PHA55_RS21825;Dbxref=Genbank:WP_000354622.1;Name=WP_000354622.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312154.1;locus_tag=PHA55_RS21825;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_000354622.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4482552	4483901	.	+	.	ID=gene-PHA55_RS21830;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=PHA55_RS21830;old_locus_tag=PHA55_21825
NZ_CP116044.1	Protein Homology	CDS	4482552	4483901	.	+	0	ID=cds-WP_000884620.1;Parent=gene-PHA55_RS21830;Dbxref=Genbank:WP_000884620.1;Name=WP_000884620.1;Ontology_term=GO:0006633,GO:0003989,GO:0004075,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,biotin carboxylase activity|0004075||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=PHA55_RS21830;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_000884620.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4484010	4484252	.	+	.	ID=gene-PHA55_RS21835;Name=yhdT;gbkey=Gene;gene=yhdT;gene_biotype=protein_coding;locus_tag=PHA55_RS21835;old_locus_tag=PHA55_21830
NZ_CP116044.1	Protein Homology	CDS	4484010	4484252	.	+	0	ID=cds-WP_000381170.1;Parent=gene-PHA55_RS21835;Dbxref=Genbank:WP_000381170.1;Name=WP_000381170.1;gbkey=CDS;gene=yhdT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312156.1;locus_tag=PHA55_RS21835;product=YhdT family protein;protein_id=WP_000381170.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4484242	4485693	.	+	.	ID=gene-PHA55_RS21840;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=PHA55_RS21840;old_locus_tag=PHA55_21835
NZ_CP116044.1	Protein Homology	CDS	4484242	4485693	.	+	0	ID=cds-WP_001175728.1;Parent=gene-PHA55_RS21840;Dbxref=Genbank:WP_001175728.1;Name=WP_001175728.1;Ontology_term=GO:0015887,GO:0015937,GO:0015498;gbkey=CDS;gene=panF;go_function=pantothenate:sodium symporter activity|0015498||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312157.2;locus_tag=PHA55_RS21840;product=sodium/pantothenate symporter;protein_id=WP_001175728.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4485705	4486586	.	+	.	ID=gene-PHA55_RS21845;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=PHA55_RS21845;old_locus_tag=PHA55_21840
NZ_CP116044.1	Protein Homology	CDS	4485705	4486586	.	+	0	ID=cds-WP_171871283.1;Parent=gene-PHA55_RS21845;Dbxref=Genbank:WP_171871283.1;Name=WP_171871283.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312158.1;locus_tag=PHA55_RS21845;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_171871283.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4486915	4487880	.	+	.	ID=gene-PHA55_RS21850;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=PHA55_RS21850;old_locus_tag=PHA55_21845
NZ_CP116044.1	Protein Homology	CDS	4486915	4487880	.	+	0	ID=cds-WP_001219652.1;Parent=gene-PHA55_RS21850;Dbxref=Genbank:WP_001219652.1;Name=WP_001219652.1;Ontology_term=GO:0008033,GO:0003824,GO:0016491,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=catalytic activity|0003824||IEA,oxidoreductase activity|0016491||IEA,tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1;locus_tag=PHA55_RS21850;product=tRNA dihydrouridine synthase DusB;protein_id=WP_001219652.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4487906	4488202	.	+	.	ID=gene-PHA55_RS21855;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=PHA55_RS21855;old_locus_tag=PHA55_21850
NZ_CP116044.1	Protein Homology	CDS	4487906	4488202	.	+	0	ID=cds-WP_000462905.1;Parent=gene-PHA55_RS21855;Dbxref=Genbank:WP_000462905.1;Name=WP_000462905.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=PHA55_RS21855;product=DNA-binding transcriptional regulator Fis;protein_id=WP_000462905.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4488288	4489172	.	+	.	ID=gene-PHA55_RS21860;Name=yhdJ;gbkey=Gene;gene=yhdJ;gene_biotype=protein_coding;locus_tag=PHA55_RS21860;old_locus_tag=PHA55_21855
NZ_CP116044.1	Protein Homology	CDS	4488288	4489172	.	+	0	ID=cds-WP_001258900.1;Parent=gene-PHA55_RS21860;Dbxref=Genbank:WP_001258900.1;Name=WP_001258900.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;gene=yhdJ;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417728.4;locus_tag=PHA55_RS21860;product=adenine-specific DNA-methyltransferase;protein_id=WP_001258900.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4489256	4489435	.	+	.	ID=gene-PHA55_RS21865;Name=yhdU;gbkey=Gene;gene=yhdU;gene_biotype=protein_coding;locus_tag=PHA55_RS21865;old_locus_tag=PHA55_21860
NZ_CP116044.1	Protein Homology	CDS	4489256	4489435	.	+	0	ID=cds-WP_001355779.1;Parent=gene-PHA55_RS21865;Dbxref=Genbank:WP_001355779.1;Name=WP_001355779.1;gbkey=CDS;gene=yhdU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312162.1;locus_tag=PHA55_RS21865;product=DUF2556 family protein;protein_id=WP_001355779.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4489438	4490100	.	-	.	ID=gene-PHA55_RS21870;Name=acrS;gbkey=Gene;gene=acrS;gene_biotype=protein_coding;locus_tag=PHA55_RS21870;old_locus_tag=PHA55_21865
NZ_CP116044.1	Protein Homology	CDS	4489438	4490100	.	-	0	ID=cds-WP_001129509.1;Parent=gene-PHA55_RS21870;Dbxref=Genbank:WP_001129509.1;Name=WP_001129509.1;gbkey=CDS;gene=acrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312163.1;locus_tag=PHA55_RS21870;product=multidrug efflux transporter transcriptional repressor AcrS;protein_id=WP_001129509.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4490499	4491656	.	+	.	ID=gene-PHA55_RS21875;Name=acrE;gbkey=Gene;gene=acrE;gene_biotype=protein_coding;locus_tag=PHA55_RS21875;old_locus_tag=PHA55_21870
NZ_CP116044.1	Protein Homology	CDS	4490499	4491656	.	+	0	ID=cds-WP_138809971.1;Parent=gene-PHA55_RS21875;Dbxref=Genbank:WP_138809971.1;Name=WP_138809971.1;gbkey=CDS;gene=acrE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417731.1;locus_tag=PHA55_RS21875;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrE;protein_id=WP_138809971.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4491668	4494772	.	+	.	ID=gene-PHA55_RS21880;Name=acrF;gbkey=Gene;gene=acrF;gene_biotype=protein_coding;locus_tag=PHA55_RS21880;old_locus_tag=PHA55_21875
NZ_CP116044.1	Protein Homology	CDS	4491668	4494772	.	+	0	ID=cds-WP_038976812.1;Parent=gene-PHA55_RS21880;Dbxref=Genbank:WP_038976812.1;Name=WP_038976812.1;gbkey=CDS;gene=acrF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417732.1;locus_tag=PHA55_RS21880;product=multidrug efflux RND transporter permease subunit AcrF;protein_id=WP_038976812.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4495025	4495246	.	+	.	ID=gene-PHA55_RS21885;Name=PHA55_RS21885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS21885;old_locus_tag=PHA55_21880
NZ_CP116044.1	Protein Homology	CDS	4495025	4495246	.	+	0	ID=cds-WP_000825639.1;Parent=gene-PHA55_RS21885;Dbxref=Genbank:WP_000825639.1;Name=WP_000825639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312167.1;locus_tag=PHA55_RS21885;product=membrane protein;protein_id=WP_000825639.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4495677	4496702	.	+	.	ID=gene-PHA55_RS21890;Name=PHA55_RS21890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS21890;old_locus_tag=PHA55_21885
NZ_CP116044.1	Protein Homology	CDS	4495677	4496702	.	+	0	ID=cds-WP_000738579.1;Parent=gene-PHA55_RS21890;Dbxref=Genbank:WP_000738579.1;Name=WP_000738579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121390.1;locus_tag=PHA55_RS21890;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_000738579.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4496770	4497951	.	+	.	ID=gene-PHA55_RS21895;Name=yhdX;gbkey=Gene;gene=yhdX;gene_biotype=protein_coding;locus_tag=PHA55_RS21895;old_locus_tag=PHA55_21890
NZ_CP116044.1	Protein Homology	CDS	4496770	4497951	.	+	0	ID=cds-WP_000019674.1;Parent=gene-PHA55_RS21895;Dbxref=Genbank:WP_000019674.1;Name=WP_000019674.1;gbkey=CDS;gene=yhdX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026209.1;locus_tag=PHA55_RS21895;product=amino acid ABC transporter permease;protein_id=WP_000019674.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4497961	4499064	.	+	.	ID=gene-PHA55_RS21900;Name=yhdY;gbkey=Gene;gene=yhdY;gene_biotype=protein_coding;locus_tag=PHA55_RS21900;old_locus_tag=PHA55_21895
NZ_CP116044.1	Protein Homology	CDS	4497961	4499064	.	+	0	ID=cds-WP_001307418.1;Parent=gene-PHA55_RS21900;Dbxref=Genbank:WP_001307418.1;Name=WP_001307418.1;gbkey=CDS;gene=yhdY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709065.2;locus_tag=PHA55_RS21900;product=amino acid ABC transporter permease;protein_id=WP_001307418.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4499072	4499830	.	+	.	ID=gene-PHA55_RS21905;Name=yhdZ;gbkey=Gene;gene=yhdZ;gene_biotype=protein_coding;locus_tag=PHA55_RS21905;old_locus_tag=PHA55_21900
NZ_CP116044.1	Protein Homology	CDS	4499072	4499830	.	+	0	ID=cds-WP_000078332.1;Parent=gene-PHA55_RS21905;Dbxref=Genbank:WP_000078332.1;Name=WP_000078332.1;gbkey=CDS;gene=yhdZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312171.1;locus_tag=PHA55_RS21905;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_000078332.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4499893	4500008	.	-	.	ID=gene-PHA55_RS21910;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PHA55_RS21910;old_locus_tag=PHA55_21905
NZ_CP116044.1	cmsearch	rRNA	4499893	4500008	.	-	.	ID=rna-PHA55_RS21910;Parent=gene-PHA55_RS21910;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS21910;product=5S ribosomal RNA
NZ_CP116044.1	cmsearch	exon	4499893	4500008	.	-	.	ID=exon-PHA55_RS21910-1;Parent=rna-PHA55_RS21910;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS21910;product=5S ribosomal RNA
NZ_CP116044.1	RefSeq	gene	4500048	4500123	.	-	.	ID=gene-PHA55_RS21915;Name=PHA55_RS21915;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS21915;old_locus_tag=PHA55_21910
NZ_CP116044.1	tRNAscan-SE	tRNA	4500048	4500123	.	-	.	ID=rna-PHA55_RS21915;Parent=gene-PHA55_RS21915;anticodon=(pos:complement(4500088..4500090));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS21915;product=tRNA-Thr
NZ_CP116044.1	tRNAscan-SE	exon	4500048	4500123	.	-	.	ID=exon-PHA55_RS21915-1;Parent=rna-PHA55_RS21915;anticodon=(pos:complement(4500088..4500090));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS21915;product=tRNA-Thr
NZ_CP116044.1	RefSeq	gene	4500138	4500253	.	-	.	ID=gene-PHA55_RS21920;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PHA55_RS21920;old_locus_tag=PHA55_21915
NZ_CP116044.1	cmsearch	rRNA	4500138	4500253	.	-	.	ID=rna-PHA55_RS21920;Parent=gene-PHA55_RS21920;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS21920;product=5S ribosomal RNA
NZ_CP116044.1	cmsearch	exon	4500138	4500253	.	-	.	ID=exon-PHA55_RS21920-1;Parent=rna-PHA55_RS21920;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS21920;product=5S ribosomal RNA
NZ_CP116044.1	RefSeq	gene	4500348	4503251	.	-	.	ID=gene-PHA55_RS21925;Name=PHA55_RS21925;gbkey=Gene;gene_biotype=rRNA;locus_tag=PHA55_RS21925;old_locus_tag=PHA55_21920
NZ_CP116044.1	cmsearch	rRNA	4500348	4503251	.	-	.	ID=rna-PHA55_RS21925;Parent=gene-PHA55_RS21925;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS21925;product=23S ribosomal RNA
NZ_CP116044.1	cmsearch	exon	4500348	4503251	.	-	.	ID=exon-PHA55_RS21925-1;Parent=rna-PHA55_RS21925;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS21925;product=23S ribosomal RNA
NZ_CP116044.1	RefSeq	gene	4503435	4503510	.	-	.	ID=gene-PHA55_RS21930;Name=PHA55_RS21930;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS21930;old_locus_tag=PHA55_21925
NZ_CP116044.1	tRNAscan-SE	tRNA	4503435	4503510	.	-	.	ID=rna-PHA55_RS21930;Parent=gene-PHA55_RS21930;anticodon=(pos:complement(4503475..4503477));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS21930;product=tRNA-Ala
NZ_CP116044.1	tRNAscan-SE	exon	4503435	4503510	.	-	.	ID=exon-PHA55_RS21930-1;Parent=rna-PHA55_RS21930;anticodon=(pos:complement(4503475..4503477));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS21930;product=tRNA-Ala
NZ_CP116044.1	RefSeq	gene	4503553	4503629	.	-	.	ID=gene-PHA55_RS21935;Name=PHA55_RS21935;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS21935;old_locus_tag=PHA55_21930
NZ_CP116044.1	tRNAscan-SE	tRNA	4503553	4503629	.	-	.	ID=rna-PHA55_RS21935;Parent=gene-PHA55_RS21935;anticodon=(pos:complement(4503593..4503595));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS21935;product=tRNA-Ile
NZ_CP116044.1	tRNAscan-SE	exon	4503553	4503629	.	-	.	ID=exon-PHA55_RS21935-1;Parent=rna-PHA55_RS21935;anticodon=(pos:complement(4503593..4503595));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS21935;product=tRNA-Ile
NZ_CP116044.1	RefSeq	gene	4503698	4505239	.	-	.	ID=gene-PHA55_RS21940;Name=PHA55_RS21940;gbkey=Gene;gene_biotype=rRNA;locus_tag=PHA55_RS21940;old_locus_tag=PHA55_21935
NZ_CP116044.1	cmsearch	rRNA	4503698	4505239	.	-	.	ID=rna-PHA55_RS21940;Parent=gene-PHA55_RS21940;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS21940;product=16S ribosomal RNA
NZ_CP116044.1	cmsearch	exon	4503698	4505239	.	-	.	ID=exon-PHA55_RS21940-1;Parent=rna-PHA55_RS21940;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS21940;product=16S ribosomal RNA
NZ_CP116044.1	RefSeq	gene	4505710	4506264	.	+	.	ID=gene-PHA55_RS21945;Name=yrdA;gbkey=Gene;gene=yrdA;gene_biotype=protein_coding;locus_tag=PHA55_RS21945;old_locus_tag=PHA55_21940
NZ_CP116044.1	Protein Homology	CDS	4505710	4506264	.	+	0	ID=cds-WP_001286216.1;Parent=gene-PHA55_RS21945;Dbxref=Genbank:WP_001286216.1;Name=WP_001286216.1;gbkey=CDS;gene=yrdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417738.4;locus_tag=PHA55_RS21945;product=gamma carbonic anhydrase family protein;protein_id=WP_001286216.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4506240	4506497	.	-	.	ID=gene-PHA55_RS21950;Name=yrdB;gbkey=Gene;gene=yrdB;gene_biotype=protein_coding;locus_tag=PHA55_RS21950;old_locus_tag=PHA55_21945
NZ_CP116044.1	Protein Homology	CDS	4506240	4506497	.	-	0	ID=cds-WP_001615678.1;Parent=gene-PHA55_RS21950;Dbxref=Genbank:WP_001615678.1;Name=WP_001615678.1;gbkey=CDS;gene=yrdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417739.1;locus_tag=PHA55_RS21950;product=DUF1488 domain-containing protein;protein_id=WP_001615678.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4506494	4507312	.	-	.	ID=gene-PHA55_RS21955;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=PHA55_RS21955;old_locus_tag=PHA55_21950
NZ_CP116044.1	Protein Homology	CDS	4506494	4507312	.	-	0	ID=cds-WP_000451211.1;Parent=gene-PHA55_RS21955;Dbxref=Genbank:WP_000451211.1;Name=WP_000451211.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709069.2;locus_tag=PHA55_RS21955;product=shikimate dehydrogenase;protein_id=WP_000451211.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4507317	4507889	.	-	.	ID=gene-PHA55_RS21960;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=PHA55_RS21960;old_locus_tag=PHA55_21955
NZ_CP116044.1	Protein Homology	CDS	4507317	4507889	.	-	0	ID=cds-WP_001297709.1;Parent=gene-PHA55_RS21960;Dbxref=Genbank:WP_001297709.1;Name=WP_001297709.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312175.1;locus_tag=PHA55_RS21960;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WP_001297709.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4507894	4508436	.	-	.	ID=gene-PHA55_RS21965;Name=yrdD;gbkey=Gene;gene=yrdD;gene_biotype=protein_coding;locus_tag=PHA55_RS21965;old_locus_tag=PHA55_21960
NZ_CP116044.1	Protein Homology	CDS	4507894	4508436	.	-	0	ID=cds-WP_001129723.1;Parent=gene-PHA55_RS21965;Dbxref=Genbank:WP_001129723.1;Name=WP_001129723.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005694;gbkey=CDS;gene=yrdD;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026210.1;locus_tag=PHA55_RS21965;product=type I DNA topoisomerase;protein_id=WP_001129723.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4508465	4508938	.	-	.	ID=gene-PHA55_RS21970;Name=smg;gbkey=Gene;gene=smg;gene_biotype=protein_coding;locus_tag=PHA55_RS21970;old_locus_tag=PHA55_21965
NZ_CP116044.1	Protein Homology	CDS	4508465	4508938	.	-	0	ID=cds-WP_000460670.1;Parent=gene-PHA55_RS21970;Dbxref=Genbank:WP_000460670.1;Name=WP_000460670.1;gbkey=CDS;gene=smg;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=PHA55_RS21970;product=DUF494 family protein Smg;protein_id=WP_000460670.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4508910	4510034	.	-	.	ID=gene-PHA55_RS21975;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=PHA55_RS21975;old_locus_tag=PHA55_21970
NZ_CP116044.1	Protein Homology	CDS	4508910	4510034	.	-	0	ID=cds-WP_000228538.1;Parent=gene-PHA55_RS21975;Dbxref=Genbank:WP_000228538.1;Name=WP_000228538.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026211.1;locus_tag=PHA55_RS21975;product=DNA-protecting protein DprA;protein_id=WP_000228538.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4510164	4510673	.	+	.	ID=gene-PHA55_RS21980;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=PHA55_RS21980;old_locus_tag=PHA55_21975
NZ_CP116044.1	Protein Homology	CDS	4510164	4510673	.	+	0	ID=cds-WP_000114984.1;Parent=gene-PHA55_RS21980;Dbxref=Genbank:WP_000114984.1;Name=WP_000114984.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312179.1;locus_tag=PHA55_RS21980;product=peptide deformylase;protein_id=WP_000114984.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4510688	4511635	.	+	.	ID=gene-PHA55_RS21985;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=PHA55_RS21985;old_locus_tag=PHA55_21980
NZ_CP116044.1	Protein Homology	CDS	4510688	4511635	.	+	0	ID=cds-WP_000004454.1;Parent=gene-PHA55_RS21985;Dbxref=Genbank:WP_000004454.1;Name=WP_000004454.1;Ontology_term=GO:0006431,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312180.1;locus_tag=PHA55_RS21985;product=methionyl-tRNA formyltransferase;protein_id=WP_000004454.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4511681	4512970	.	+	.	ID=gene-PHA55_RS21990;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=PHA55_RS21990;old_locus_tag=PHA55_21985
NZ_CP116044.1	Protein Homology	CDS	4511681	4512970	.	+	0	ID=cds-WP_000744779.1;Parent=gene-PHA55_RS21990;Dbxref=Genbank:WP_000744779.1;Name=WP_000744779.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417747.1;locus_tag=PHA55_RS21990;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_000744779.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4512992	4514368	.	+	.	ID=gene-PHA55_RS21995;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=PHA55_RS21995;old_locus_tag=PHA55_21990
NZ_CP116044.1	Protein Homology	CDS	4512992	4514368	.	+	0	ID=cds-WP_000691382.1;Parent=gene-PHA55_RS21995;Dbxref=Genbank:WP_000691382.1;Name=WP_000691382.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=PHA55_RS21995;product=Trk system potassium transporter TrkA;protein_id=WP_000691382.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4514498	4514908	.	+	.	ID=gene-PHA55_RS22000;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=PHA55_RS22000;old_locus_tag=PHA55_21995
NZ_CP116044.1	Protein Homology	CDS	4514498	4514908	.	+	0	ID=cds-WP_000022442.1;Parent=gene-PHA55_RS22000;Dbxref=Genbank:WP_000022442.1;Name=WP_000022442.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312183.1;locus_tag=PHA55_RS22000;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_000022442.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4514905	4515123	.	-	.	ID=gene-PHA55_RS22005;Name=arfA;gbkey=Gene;gene=arfA;gene_biotype=protein_coding;locus_tag=PHA55_RS22005;old_locus_tag=PHA55_22000
NZ_CP116044.1	Protein Homology	CDS	4514905	4515123	.	-	0	ID=cds-WP_000092699.1;Parent=gene-PHA55_RS22005;Dbxref=Genbank:WP_000092699.1;Name=WP_000092699.1;gbkey=CDS;gene=arfA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588467.1;locus_tag=PHA55_RS22005;product=alternative ribosome-rescue factor ArfA;protein_id=WP_000092699.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4515179	4515604	.	-	.	ID=gene-PHA55_RS22010;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=PHA55_RS22010;old_locus_tag=PHA55_22005
NZ_CP116044.1	Protein Homology	CDS	4515179	4515604	.	-	0	ID=cds-WP_000285607.1;Parent=gene-PHA55_RS22010;Dbxref=Genbank:WP_000285607.1;Name=WP_000285607.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312184.1;locus_tag=PHA55_RS22010;product=Zn(2+)-responsive transcriptional regulator;protein_id=WP_000285607.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4515615	4515983	.	-	.	ID=gene-PHA55_RS22015;Name=yhdN;gbkey=Gene;gene=yhdN;gene_biotype=protein_coding;locus_tag=PHA55_RS22015;old_locus_tag=PHA55_22010
NZ_CP116044.1	Protein Homology	CDS	4515615	4515983	.	-	0	ID=cds-WP_000266488.1;Parent=gene-PHA55_RS22015;Dbxref=Genbank:WP_000266488.1;Name=WP_000266488.1;gbkey=CDS;gene=yhdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312185.1;locus_tag=PHA55_RS22015;product=DUF1992 domain-containing protein;protein_id=WP_000266488.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4516090	4516473	.	-	.	ID=gene-PHA55_RS22020;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=PHA55_RS22020;old_locus_tag=PHA55_22015
NZ_CP116044.1	Protein Homology	CDS	4516090	4516473	.	-	0	ID=cds-WP_001216368.1;Parent=gene-PHA55_RS22020;Dbxref=Genbank:WP_001216368.1;Name=WP_001216368.1;Ontology_term=GO:0006412,GO:0003735,GO:0005762,GO:0022625;gbkey=CDS;gene=rplQ;go_component=mitochondrial large ribosomal subunit|0005762||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312186.1;locus_tag=PHA55_RS22020;product=50S ribosomal protein L17;protein_id=WP_001216368.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4516514	4517503	.	-	.	ID=gene-PHA55_RS22025;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=PHA55_RS22025;old_locus_tag=PHA55_22020
NZ_CP116044.1	Protein Homology	CDS	4516514	4517503	.	-	0	ID=cds-WP_001162094.1;Parent=gene-PHA55_RS22025;Dbxref=Genbank:WP_001162094.1;Name=WP_001162094.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;gene=rpoA;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=PHA55_RS22025;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_001162094.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4517529	4518149	.	-	.	ID=gene-PHA55_RS22030;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=PHA55_RS22030;old_locus_tag=PHA55_22025
NZ_CP116044.1	Protein Homology	CDS	4517529	4518149	.	-	0	ID=cds-WP_000135224.1;Parent=gene-PHA55_RS22030;Dbxref=Genbank:WP_000135224.1;Name=WP_000135224.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=PHA55_RS22030;product=30S ribosomal protein S4;protein_id=WP_000135224.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4518183	4518572	.	-	.	ID=gene-PHA55_RS22035;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=PHA55_RS22035;old_locus_tag=PHA55_22030
NZ_CP116044.1	Protein Homology	CDS	4518183	4518572	.	-	0	ID=cds-WP_001029684.1;Parent=gene-PHA55_RS22035;Dbxref=Genbank:WP_001029684.1;Name=WP_001029684.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=PHA55_RS22035;product=30S ribosomal protein S11;protein_id=WP_001029684.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4518589	4518945	.	-	.	ID=gene-PHA55_RS22040;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=PHA55_RS22040;old_locus_tag=PHA55_22035
NZ_CP116044.1	Protein Homology	CDS	4518589	4518945	.	-	0	ID=cds-WP_000090775.1;Parent=gene-PHA55_RS22040;Dbxref=Genbank:WP_000090775.1;Name=WP_000090775.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;gene=rpsM;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=PHA55_RS22040;product=30S ribosomal protein S13;protein_id=WP_000090775.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4519092	4519208	.	-	.	ID=gene-PHA55_RS22045;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=PHA55_RS22045;old_locus_tag=PHA55_22040
NZ_CP116044.1	Protein Homology	CDS	4519092	4519208	.	-	0	ID=cds-WP_000868187.1;Parent=gene-PHA55_RS22045;Dbxref=Genbank:WP_000868187.1;Name=WP_000868187.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=PHA55_RS22045;product=50S ribosomal protein L36;protein_id=WP_000868187.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4519240	4520571	.	-	.	ID=gene-PHA55_RS22050;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=PHA55_RS22050;old_locus_tag=PHA55_22045
NZ_CP116044.1	Protein Homology	CDS	4519240	4520571	.	-	0	ID=cds-WP_001118861.1;Parent=gene-PHA55_RS22050;Dbxref=Genbank:WP_001118861.1;Name=WP_001118861.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secY;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=PHA55_RS22050;product=preprotein translocase subunit SecY;protein_id=WP_001118861.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4520579	4521013	.	-	.	ID=gene-PHA55_RS22055;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=PHA55_RS22055;old_locus_tag=PHA55_22050
NZ_CP116044.1	Protein Homology	CDS	4520579	4521013	.	-	0	ID=cds-WP_001238917.1;Parent=gene-PHA55_RS22055;Dbxref=Genbank:WP_001238917.1;Name=WP_001238917.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplO;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=PHA55_RS22055;product=50S ribosomal protein L15;protein_id=WP_001238917.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4521017	4521196	.	-	.	ID=gene-PHA55_RS22060;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=PHA55_RS22060;old_locus_tag=PHA55_22055
NZ_CP116044.1	Protein Homology	CDS	4521017	4521196	.	-	0	ID=cds-WP_001140433.1;Parent=gene-PHA55_RS22060;Dbxref=Genbank:WP_001140433.1;Name=WP_001140433.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmD;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=PHA55_RS22060;product=50S ribosomal protein L30;protein_id=WP_001140433.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4521200	4521703	.	-	.	ID=gene-PHA55_RS22065;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=PHA55_RS22065;old_locus_tag=PHA55_22060
NZ_CP116044.1	Protein Homology	CDS	4521200	4521703	.	-	0	ID=cds-WP_000940121.1;Parent=gene-PHA55_RS22065;Dbxref=Genbank:WP_000940121.1;Name=WP_000940121.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsE;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=PHA55_RS22065;product=30S ribosomal protein S5;protein_id=WP_000940121.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4521718	4522071	.	-	.	ID=gene-PHA55_RS22070;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=PHA55_RS22070;old_locus_tag=PHA55_22065
NZ_CP116044.1	Protein Homology	CDS	4521718	4522071	.	-	0	ID=cds-WP_000358960.1;Parent=gene-PHA55_RS22070;Dbxref=Genbank:WP_000358960.1;Name=WP_000358960.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplR;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=PHA55_RS22070;product=50S ribosomal protein L18;protein_id=WP_000358960.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4522081	4522614	.	-	.	ID=gene-PHA55_RS22075;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=PHA55_RS22075;old_locus_tag=PHA55_22070
NZ_CP116044.1	Protein Homology	CDS	4522081	4522614	.	-	0	ID=cds-WP_000091945.1;Parent=gene-PHA55_RS22075;Dbxref=Genbank:WP_000091945.1;Name=WP_000091945.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0022625;gbkey=CDS;gene=rplF;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=PHA55_RS22075;product=50S ribosomal protein L6;protein_id=WP_000091945.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4522627	4523019	.	-	.	ID=gene-PHA55_RS22080;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=PHA55_RS22080;old_locus_tag=PHA55_22075
NZ_CP116044.1	Protein Homology	CDS	4522627	4523019	.	-	0	ID=cds-WP_000062611.1;Parent=gene-PHA55_RS22080;Dbxref=Genbank:WP_000062611.1;Name=WP_000062611.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=PHA55_RS22080;product=30S ribosomal protein S8;protein_id=WP_000062611.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4523053	4523358	.	-	.	ID=gene-PHA55_RS22085;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=PHA55_RS22085;old_locus_tag=PHA55_22080
NZ_CP116044.1	Protein Homology	CDS	4523053	4523358	.	-	0	ID=cds-WP_001118930.1;Parent=gene-PHA55_RS22085;Dbxref=Genbank:WP_001118930.1;Name=WP_001118930.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=PHA55_RS22085;product=30S ribosomal protein S14;protein_id=WP_001118930.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4523373	4523912	.	-	.	ID=gene-PHA55_RS22090;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=PHA55_RS22090;old_locus_tag=PHA55_22085
NZ_CP116044.1	Protein Homology	CDS	4523373	4523912	.	-	0	ID=cds-WP_001096200.1;Parent=gene-PHA55_RS22090;Dbxref=Genbank:WP_001096200.1;Name=WP_001096200.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=PHA55_RS22090;product=50S ribosomal protein L5;protein_id=WP_001096200.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4523927	4524241	.	-	.	ID=gene-PHA55_RS22095;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=PHA55_RS22095;old_locus_tag=PHA55_22090
NZ_CP116044.1	Protein Homology	CDS	4523927	4524241	.	-	0	ID=cds-WP_000729185.1;Parent=gene-PHA55_RS22095;Dbxref=Genbank:WP_000729185.1;Name=WP_000729185.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplX;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=PHA55_RS22095;product=50S ribosomal protein L24;protein_id=WP_000729185.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4524252	4524623	.	-	.	ID=gene-PHA55_RS22100;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=PHA55_RS22100;old_locus_tag=PHA55_22095
NZ_CP116044.1	Protein Homology	CDS	4524252	4524623	.	-	0	ID=cds-WP_000613955.1;Parent=gene-PHA55_RS22100;Dbxref=Genbank:WP_000613955.1;Name=WP_000613955.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplN;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=PHA55_RS22100;product=50S ribosomal protein L14;protein_id=WP_000613955.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4524788	4525042	.	-	.	ID=gene-PHA55_RS22105;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=PHA55_RS22105;old_locus_tag=PHA55_22100
NZ_CP116044.1	Protein Homology	CDS	4524788	4525042	.	-	0	ID=cds-WP_000130100.1;Parent=gene-PHA55_RS22105;Dbxref=Genbank:WP_000130100.1;Name=WP_000130100.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=PHA55_RS22105;product=30S ribosomal protein S17;protein_id=WP_000130100.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4525042	4525233	.	-	.	ID=gene-PHA55_RS22110;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=PHA55_RS22110;old_locus_tag=PHA55_22105
NZ_CP116044.1	Protein Homology	CDS	4525042	4525233	.	-	0	ID=cds-WP_000644741.1;Parent=gene-PHA55_RS22110;Dbxref=Genbank:WP_000644741.1;Name=WP_000644741.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmC;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=PHA55_RS22110;product=50S ribosomal protein L29;protein_id=WP_000644741.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4525233	4525643	.	-	.	ID=gene-PHA55_RS22115;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=PHA55_RS22115;old_locus_tag=PHA55_22110
NZ_CP116044.1	Protein Homology	CDS	4525233	4525643	.	-	0	ID=cds-WP_000941212.1;Parent=gene-PHA55_RS22115;Dbxref=Genbank:WP_000941212.1;Name=WP_000941212.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplP;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=PHA55_RS22115;product=50S ribosomal protein L16;protein_id=WP_000941212.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4525656	4526357	.	-	.	ID=gene-PHA55_RS22120;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=PHA55_RS22120;old_locus_tag=PHA55_22115
NZ_CP116044.1	Protein Homology	CDS	4525656	4526357	.	-	0	ID=cds-WP_000529945.1;Parent=gene-PHA55_RS22120;Dbxref=Genbank:WP_000529945.1;Name=WP_000529945.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsC;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=PHA55_RS22120;product=30S ribosomal protein S3;protein_id=WP_000529945.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4526375	4526707	.	-	.	ID=gene-PHA55_RS22125;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=PHA55_RS22125;old_locus_tag=PHA55_22120
NZ_CP116044.1	Protein Homology	CDS	4526375	4526707	.	-	0	ID=cds-WP_000447529.1;Parent=gene-PHA55_RS22125;Dbxref=Genbank:WP_000447529.1;Name=WP_000447529.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplV;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=PHA55_RS22125;product=50S ribosomal protein L22;protein_id=WP_000447529.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4526722	4527000	.	-	.	ID=gene-PHA55_RS22130;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=PHA55_RS22130;old_locus_tag=PHA55_22125
NZ_CP116044.1	Protein Homology	CDS	4526722	4527000	.	-	0	ID=cds-WP_001138117.1;Parent=gene-PHA55_RS22130;Dbxref=Genbank:WP_001138117.1;Name=WP_001138117.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsS;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=PHA55_RS22130;product=30S ribosomal protein S19;protein_id=WP_001138117.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4527017	4527838	.	-	.	ID=gene-PHA55_RS22135;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=PHA55_RS22135;old_locus_tag=PHA55_22130
NZ_CP116044.1	Protein Homology	CDS	4527017	4527838	.	-	0	ID=cds-WP_000301864.1;Parent=gene-PHA55_RS22135;Dbxref=Genbank:WP_000301864.1;Name=WP_000301864.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplB;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=PHA55_RS22135;product=50S ribosomal protein L2;protein_id=WP_000301864.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4527856	4528158	.	-	.	ID=gene-PHA55_RS22140;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=PHA55_RS22140;old_locus_tag=PHA55_22135
NZ_CP116044.1	Protein Homology	CDS	4527856	4528158	.	-	0	ID=cds-WP_000617544.1;Parent=gene-PHA55_RS22140;Dbxref=Genbank:WP_000617544.1;Name=WP_000617544.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=PHA55_RS22140;product=50S ribosomal protein L23;protein_id=WP_000617544.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4528155	4528760	.	-	.	ID=gene-PHA55_RS22145;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=PHA55_RS22145;old_locus_tag=PHA55_22140
NZ_CP116044.1	Protein Homology	CDS	4528155	4528760	.	-	0	ID=cds-WP_000424395.1;Parent=gene-PHA55_RS22145;Dbxref=Genbank:WP_000424395.1;Name=WP_000424395.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=PHA55_RS22145;product=50S ribosomal protein L4;protein_id=WP_000424395.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4528771	4529400	.	-	.	ID=gene-PHA55_RS22150;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=PHA55_RS22150;old_locus_tag=PHA55_22145
NZ_CP116044.1	Protein Homology	CDS	4528771	4529400	.	-	0	ID=cds-WP_000579833.1;Parent=gene-PHA55_RS22150;Dbxref=Genbank:WP_000579833.1;Name=WP_000579833.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=PHA55_RS22150;product=50S ribosomal protein L3;protein_id=WP_000579833.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4529433	4529744	.	-	.	ID=gene-PHA55_RS22155;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=PHA55_RS22155;old_locus_tag=PHA55_22150
NZ_CP116044.1	Protein Homology	CDS	4529433	4529744	.	-	0	ID=cds-WP_001181004.1;Parent=gene-PHA55_RS22155;Dbxref=Genbank:WP_001181004.1;Name=WP_001181004.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=PHA55_RS22155;product=30S ribosomal protein S10;protein_id=WP_001181004.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4530123	4530590	.	+	.	ID=gene-PHA55_RS22160;Name=PHA55_RS22160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS22160;old_locus_tag=PHA55_22155
NZ_CP116044.1	Protein Homology	CDS	4530123	4530590	.	+	0	ID=cds-WP_000340171.1;Parent=gene-PHA55_RS22160;Dbxref=Genbank:WP_000340171.1;Name=WP_000340171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312215.1;locus_tag=PHA55_RS22160;product=A24 family peptidase;protein_id=WP_000340171.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4530587	4531063	.	-	.	ID=gene-PHA55_RS22165;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=PHA55_RS22165;old_locus_tag=PHA55_22160
NZ_CP116044.1	Protein Homology	CDS	4530587	4531063	.	-	0	ID=cds-WP_000675515.1;Parent=gene-PHA55_RS22165;Dbxref=Genbank:WP_000675515.1;Name=WP_000675515.1;Ontology_term=GO:0006880,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular sequestering of iron ion|0006880||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709111.1;locus_tag=PHA55_RS22165;product=bacterioferritin;protein_id=WP_000675515.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4531136	4531330	.	-	.	ID=gene-PHA55_RS22170;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=PHA55_RS22170;old_locus_tag=PHA55_22165
NZ_CP116044.1	Protein Homology	CDS	4531136	4531330	.	-	0	ID=cds-WP_000289090.1;Parent=gene-PHA55_RS22170;Dbxref=Genbank:WP_000289090.1;Name=WP_000289090.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709112.1;locus_tag=PHA55_RS22170;product=bacterioferritin-associated ferredoxin;protein_id=WP_000289090.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4531513	4532697	.	-	.	ID=gene-PHA55_RS22175;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=PHA55_RS22175;old_locus_tag=PHA55_22170
NZ_CP116044.1	Protein Homology	CDS	4531513	4532697	.	-	0	ID=cds-WP_000031783.1;Parent=gene-PHA55_RS22175;Dbxref=Genbank:WP_000031783.1;Name=WP_000031783.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=PHA55_RS22175;product=elongation factor Tu;protein_id=WP_000031783.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4532768	4534882	.	-	.	ID=gene-PHA55_RS22180;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=PHA55_RS22180;old_locus_tag=PHA55_22175
NZ_CP116044.1	Protein Homology	CDS	4532768	4534882	.	-	0	ID=cds-WP_000124700.1;Parent=gene-PHA55_RS22180;Dbxref=Genbank:WP_000124700.1;Name=WP_000124700.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=PHA55_RS22180;product=elongation factor G;protein_id=WP_000124700.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4534979	4535449	.	-	.	ID=gene-PHA55_RS22185;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=PHA55_RS22185;old_locus_tag=PHA55_22180
NZ_CP116044.1	Protein Homology	CDS	4534979	4535449	.	-	0	ID=cds-WP_001138043.1;Parent=gene-PHA55_RS22185;Dbxref=Genbank:WP_001138043.1;Name=WP_001138043.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsG;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=PHA55_RS22185;product=30S ribosomal protein S7;protein_id=WP_001138043.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4535546	4535920	.	-	.	ID=gene-PHA55_RS22190;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=PHA55_RS22190;old_locus_tag=PHA55_22185
NZ_CP116044.1	Protein Homology	CDS	4535546	4535920	.	-	0	ID=cds-WP_000246815.1;Parent=gene-PHA55_RS22190;Dbxref=Genbank:WP_000246815.1;Name=WP_000246815.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsL;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=PHA55_RS22190;product=30S ribosomal protein S12;protein_id=WP_000246815.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4536046	4536333	.	-	.	ID=gene-PHA55_RS22195;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=PHA55_RS22195;old_locus_tag=PHA55_22190
NZ_CP116044.1	Protein Homology	CDS	4536046	4536333	.	-	0	ID=cds-WP_000903377.1;Parent=gene-PHA55_RS22195;Dbxref=Genbank:WP_000903377.1;Name=WP_000903377.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312221.1;locus_tag=PHA55_RS22195;product=sulfurtransferase complex subunit TusB;protein_id=WP_000903377.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4536341	4536700	.	-	.	ID=gene-PHA55_RS22200;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=PHA55_RS22200;old_locus_tag=PHA55_22195
NZ_CP116044.1	Protein Homology	CDS	4536341	4536700	.	-	0	ID=cds-WP_000820720.1;Parent=gene-PHA55_RS22200;Dbxref=Genbank:WP_000820720.1;Name=WP_000820720.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417803.1;locus_tag=PHA55_RS22200;product=sulfurtransferase complex subunit TusC;protein_id=WP_000820720.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4536700	4537086	.	-	.	ID=gene-PHA55_RS22205;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=PHA55_RS22205;old_locus_tag=PHA55_22200
NZ_CP116044.1	Protein Homology	CDS	4536700	4537086	.	-	0	ID=cds-WP_001209711.1;Parent=gene-PHA55_RS22205;Dbxref=Genbank:WP_001209711.1;Name=WP_001209711.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709119.1;locus_tag=PHA55_RS22205;product=sulfurtransferase complex subunit TusD;protein_id=WP_001209711.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4537086	4537808	.	-	.	ID=gene-PHA55_RS22210;Name=yheO;gbkey=Gene;gene=yheO;gene_biotype=protein_coding;locus_tag=PHA55_RS22210;old_locus_tag=PHA55_22205
NZ_CP116044.1	Protein Homology	CDS	4537086	4537808	.	-	0	ID=cds-WP_000091466.1;Parent=gene-PHA55_RS22210;Dbxref=Genbank:WP_000091466.1;Name=WP_000091466.1;gbkey=CDS;gene=yheO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709120.2;locus_tag=PHA55_RS22210;product=transcriptional regulator;protein_id=WP_000091466.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4537975	4538787	.	-	.	ID=gene-PHA55_RS22215;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=PHA55_RS22215;old_locus_tag=PHA55_22210
NZ_CP116044.1	Protein Homology	CDS	4537975	4538787	.	-	0	ID=cds-WP_000838261.1;Parent=gene-PHA55_RS22215;Dbxref=Genbank:WP_000838261.1;Name=WP_000838261.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312225.1;locus_tag=PHA55_RS22215;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000838261.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4539008	4539226	.	+	.	ID=gene-PHA55_RS22220;Name=slyX;gbkey=Gene;gene=slyX;gene_biotype=protein_coding;locus_tag=PHA55_RS22220;old_locus_tag=PHA55_22215
NZ_CP116044.1	Protein Homology	CDS	4539008	4539226	.	+	0	ID=cds-WP_001153619.1;Parent=gene-PHA55_RS22220;Dbxref=Genbank:WP_001153619.1;Name=WP_001153619.1;gbkey=CDS;gene=slyX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312226.1;locus_tag=PHA55_RS22220;product=SlyX family protein;protein_id=WP_001153619.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4539275	4539865	.	-	.	ID=gene-PHA55_RS22225;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=PHA55_RS22225;old_locus_tag=PHA55_22220
NZ_CP116044.1	Protein Homology	CDS	4539275	4539865	.	-	0	ID=cds-WP_000861334.1;Parent=gene-PHA55_RS22225;Dbxref=Genbank:WP_000861334.1;Name=WP_000861334.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312227.1;locus_tag=PHA55_RS22225;product=peptidylprolyl isomerase;protein_id=WP_000861334.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4539960	4540160	.	-	.	ID=gene-PHA55_RS22230;Name=yheV;gbkey=Gene;gene=yheV;gene_biotype=protein_coding;locus_tag=PHA55_RS22230;old_locus_tag=PHA55_22225
NZ_CP116044.1	Protein Homology	CDS	4539960	4540160	.	-	0	ID=cds-WP_001007730.1;Parent=gene-PHA55_RS22230;Dbxref=Genbank:WP_001007730.1;Name=WP_001007730.1;gbkey=CDS;gene=yheV;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588468.1;locus_tag=PHA55_RS22230;product=YheV family putative zinc ribbon protein;protein_id=WP_001007730.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4540170	4541975	.	-	.	ID=gene-PHA55_RS22235;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=PHA55_RS22235;old_locus_tag=PHA55_22230
NZ_CP116044.1	Protein Homology	CDS	4540170	4541975	.	-	0	ID=cds-WP_000399122.1;Parent=gene-PHA55_RS22235;Dbxref=Genbank:WP_000399122.1;Name=WP_000399122.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417809.1;locus_tag=PHA55_RS22235;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_000399122.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4541975	4542526	.	-	.	ID=gene-PHA55_RS22240;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=PHA55_RS22240;old_locus_tag=PHA55_22235
NZ_CP116044.1	Protein Homology	CDS	4541975	4542526	.	-	0	ID=cds-WP_001297514.1;Parent=gene-PHA55_RS22240;Dbxref=Genbank:WP_001297514.1;Name=WP_001297514.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312229.2;locus_tag=PHA55_RS22240;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_001297514.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4542657	4544570	.	+	.	ID=gene-PHA55_RS22245;Name=yheS;gbkey=Gene;gene=yheS;gene_biotype=protein_coding;locus_tag=PHA55_RS22245;old_locus_tag=PHA55_22240
NZ_CP116044.1	Protein Homology	CDS	4542657	4544570	.	+	0	ID=cds-WP_000634789.1;Parent=gene-PHA55_RS22245;Dbxref=Genbank:WP_000634789.1;Name=WP_000634789.1;Ontology_term=GO:0005524;gbkey=CDS;gene=yheS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312230.1;locus_tag=PHA55_RS22245;product=ABC transporter ATP-binding protein;protein_id=WP_000634789.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4544570	4545592	.	+	.	ID=gene-PHA55_RS22250;Name=yheT;gbkey=Gene;gene=yheT;gene_biotype=protein_coding;locus_tag=PHA55_RS22250;old_locus_tag=PHA55_22245
NZ_CP116044.1	Protein Homology	CDS	4544570	4545592	.	+	0	ID=cds-WP_000057379.1;Parent=gene-PHA55_RS22250;Dbxref=Genbank:WP_000057379.1;Name=WP_000057379.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yheT;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312231.1;locus_tag=PHA55_RS22250;product=hydrolase;protein_id=WP_000057379.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4545586	4545804	.	+	.	ID=gene-PHA55_RS22255;Name=yheU;gbkey=Gene;gene=yheU;gene_biotype=protein_coding;locus_tag=PHA55_RS22255;old_locus_tag=PHA55_22250
NZ_CP116044.1	Protein Homology	CDS	4545586	4545804	.	+	0	ID=cds-WP_000907085.1;Parent=gene-PHA55_RS22255;Dbxref=Genbank:WP_000907085.1;Name=WP_000907085.1;gbkey=CDS;gene=yheU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312232.1;locus_tag=PHA55_RS22255;product=YheU family protein;protein_id=WP_000907085.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4545858	4546727	.	+	.	ID=gene-PHA55_RS22260;Name=prkB;gbkey=Gene;gene=prkB;gene_biotype=protein_coding;locus_tag=PHA55_RS22260;old_locus_tag=PHA55_22255
NZ_CP116044.1	Protein Homology	CDS	4545858	4546727	.	+	0	ID=cds-WP_001274680.1;Parent=gene-PHA55_RS22260;Dbxref=Genbank:WP_001274680.1;Name=WP_001274680.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;gene=prkB;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417814.1;locus_tag=PHA55_RS22260;product=phosphoribulokinase;protein_id=WP_001274680.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4546782	4547186	.	-	.	ID=gene-PHA55_RS22265;Name=yhfA;gbkey=Gene;gene=yhfA;gene_biotype=protein_coding;locus_tag=PHA55_RS22265;old_locus_tag=PHA55_22260
NZ_CP116044.1	Protein Homology	CDS	4546782	4547186	.	-	0	ID=cds-WP_001148908.1;Parent=gene-PHA55_RS22265;Dbxref=Genbank:WP_001148908.1;Name=WP_001148908.1;gbkey=CDS;gene=yhfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312234.1;locus_tag=PHA55_RS22265;product=OsmC family protein;protein_id=WP_001148908.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4547488	4548120	.	+	.	ID=gene-PHA55_RS22270;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=PHA55_RS22270;old_locus_tag=PHA55_22265
NZ_CP116044.1	Protein Homology	CDS	4547488	4548120	.	+	0	ID=cds-WP_000242755.1;Parent=gene-PHA55_RS22270;Dbxref=Genbank:WP_000242755.1;Name=WP_000242755.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312235.1;locus_tag=PHA55_RS22270;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_000242755.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4548171	4550261	.	+	.	ID=gene-PHA55_RS22275;Name=yhfK;gbkey=Gene;gene=yhfK;gene_biotype=protein_coding;locus_tag=PHA55_RS22275;old_locus_tag=PHA55_22270
NZ_CP116044.1	Protein Homology	CDS	4548171	4550261	.	+	0	ID=cds-WP_001295162.1;Parent=gene-PHA55_RS22275;Dbxref=Genbank:WP_001295162.1;Name=WP_001295162.1;gbkey=CDS;gene=yhfK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312236.3;locus_tag=PHA55_RS22275;product=YccS/YhfK family putative transporter;protein_id=WP_001295162.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4550328	4551548	.	-	.	ID=gene-PHA55_RS22280;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;gene_synonym=dapC;locus_tag=PHA55_RS22280;old_locus_tag=PHA55_22275
NZ_CP116044.1	Protein Homology	CDS	4550328	4551548	.	-	0	ID=cds-WP_000963797.1;Parent=gene-PHA55_RS22280;Dbxref=Genbank:WP_000963797.1;Name=WP_000963797.1;gbkey=CDS;gene=argD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417818.1;locus_tag=PHA55_RS22280;product=bifunctional acetylornithine/succinyldiaminopimelate transaminase;protein_id=WP_000963797.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4551634	4552197	.	-	.	ID=gene-PHA55_RS22285;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=PHA55_RS22285;old_locus_tag=PHA55_22280
NZ_CP116044.1	Protein Homology	CDS	4551634	4552197	.	-	0	ID=cds-WP_000601847.1;Parent=gene-PHA55_RS22285;Dbxref=Genbank:WP_000601847.1;Name=WP_000601847.1;gbkey=CDS;gene=pabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417819.1;locus_tag=PHA55_RS22285;product=aminodeoxychorismate synthase component 2;protein_id=WP_000601847.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4552229	4552831	.	-	.	ID=gene-PHA55_RS22290;Name=fic;gbkey=Gene;gene=fic;gene_biotype=protein_coding;locus_tag=PHA55_RS22290;old_locus_tag=PHA55_22285
NZ_CP116044.1	Protein Homology	CDS	4552229	4552831	.	-	0	ID=cds-WP_001280624.1;Parent=gene-PHA55_RS22290;Dbxref=Genbank:WP_001280624.1;Name=WP_001280624.1;gbkey=CDS;gene=fic;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417820.1;locus_tag=PHA55_RS22290;product=putative adenosine monophosphate-protein transferase Fic;protein_id=WP_001280624.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4552821	4552988	.	-	.	ID=gene-PHA55_RS22295;Name=yhfG;gbkey=Gene;gene=yhfG;gene_biotype=protein_coding;locus_tag=PHA55_RS22295;old_locus_tag=PHA55_22290
NZ_CP116044.1	Protein Homology	CDS	4552821	4552988	.	-	0	ID=cds-WP_000736860.1;Parent=gene-PHA55_RS22295;Dbxref=Genbank:WP_000736860.1;Name=WP_000736860.1;gbkey=CDS;gene=yhfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709137.1;locus_tag=PHA55_RS22295;product=YhfG family protein;protein_id=WP_000736860.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4553093	4553665	.	-	.	ID=gene-PHA55_RS22300;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=PHA55_RS22300;old_locus_tag=PHA55_22295
NZ_CP116044.1	Protein Homology	CDS	4553093	4553665	.	-	0	ID=cds-WP_000477225.1;Parent=gene-PHA55_RS22300;Dbxref=Genbank:WP_000477225.1;Name=WP_000477225.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312241.1;locus_tag=PHA55_RS22300;product=peptidylprolyl isomerase A;protein_id=WP_000477225.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4553936	4555117	.	+	.	ID=gene-PHA55_RS22305;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=PHA55_RS22305;old_locus_tag=PHA55_22300
NZ_CP116044.1	Protein Homology	CDS	4553936	4555117	.	+	0	ID=cds-WP_000185258.1;Parent=gene-PHA55_RS22305;Dbxref=Genbank:WP_000185258.1;Name=WP_000185258.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417823.1;locus_tag=PHA55_RS22305;product=MFS transporter TsgA;protein_id=WP_000185258.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4555379	4557922	.	+	.	ID=gene-PHA55_RS22310;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=PHA55_RS22310;old_locus_tag=PHA55_22305
NZ_CP116044.1	Protein Homology	CDS	4555379	4557922	.	+	0	ID=cds-WP_000049213.1;Parent=gene-PHA55_RS22310;Dbxref=Genbank:WP_000049213.1;Name=WP_000049213.1;gbkey=CDS;gene=nirB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709140.2;locus_tag=PHA55_RS22310;product=NADPH-nitrite reductase large subunit;protein_id=WP_000049213.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4557919	4558245	.	+	.	ID=gene-PHA55_RS22315;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=PHA55_RS22315;old_locus_tag=PHA55_22310
NZ_CP116044.1	Protein Homology	CDS	4557919	4558245	.	+	0	ID=cds-WP_000084764.1;Parent=gene-PHA55_RS22315;Dbxref=Genbank:WP_000084764.1;Name=WP_000084764.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312244.1;locus_tag=PHA55_RS22315;product=nitrite reductase small subunit NirD;protein_id=WP_000084764.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4558372	4559178	.	+	.	ID=gene-PHA55_RS22320;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=PHA55_RS22320;old_locus_tag=PHA55_22315
NZ_CP116044.1	Protein Homology	CDS	4558372	4559178	.	+	0	ID=cds-WP_000493556.1;Parent=gene-PHA55_RS22320;Dbxref=Genbank:WP_000493556.1;Name=WP_000493556.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=nirC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026212.2;locus_tag=PHA55_RS22320;product=nitrite transporter NirC;protein_id=WP_000493556.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4559197	4560570	.	+	.	ID=gene-PHA55_RS22325;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=PHA55_RS22325;old_locus_tag=PHA55_22320
NZ_CP116044.1	Protein Homology	CDS	4559197	4560570	.	+	0	ID=cds-WP_000349855.1;Parent=gene-PHA55_RS22325;Dbxref=Genbank:WP_000349855.1;Name=WP_000349855.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312246.1;locus_tag=PHA55_RS22325;product=siroheme synthase CysG;protein_id=WP_000349855.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4560817	4560984	.	+	.	ID=gene-PHA55_RS22330;Name=yhfL;gbkey=Gene;gene=yhfL;gene_biotype=protein_coding;locus_tag=PHA55_RS22330;old_locus_tag=PHA55_22325
NZ_CP116044.1	Protein Homology	CDS	4560817	4560984	.	+	0	ID=cds-WP_001031834.1;Parent=gene-PHA55_RS22330;Dbxref=Genbank:WP_001031834.1;Name=WP_001031834.1;gbkey=CDS;gene=yhfL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312247.1;locus_tag=PHA55_RS22330;product=YhfL family protein;protein_id=WP_001031834.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4561279	4562616	.	+	.	ID=gene-PHA55_RS22335;Name=frlA;gbkey=Gene;gene=frlA;gene_biotype=protein_coding;locus_tag=PHA55_RS22335;old_locus_tag=PHA55_22330
NZ_CP116044.1	Protein Homology	CDS	4561279	4562616	.	+	0	ID=cds-WP_000535505.1;Parent=gene-PHA55_RS22335;Dbxref=Genbank:WP_000535505.1;Name=WP_000535505.1;gbkey=CDS;gene=frlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417829.2;locus_tag=PHA55_RS22335;product=fructoselysine/psicoselysine transporter;protein_id=WP_000535505.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4562637	4563659	.	+	.	ID=gene-PHA55_RS22340;Name=frlB;gbkey=Gene;gene=frlB;gene_biotype=protein_coding;locus_tag=PHA55_RS22340;old_locus_tag=PHA55_22335
NZ_CP116044.1	Protein Homology	CDS	4562637	4563659	.	+	0	ID=cds-WP_001295163.1;Parent=gene-PHA55_RS22340;Dbxref=Genbank:WP_001295163.1;Name=WP_001295163.1;gbkey=CDS;gene=frlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417830.4;locus_tag=PHA55_RS22340;product=fructoselysine 6-phosphate deglycase;protein_id=WP_001295163.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4563709	4564539	.	+	.	ID=gene-PHA55_RS22345;Name=frlC;gbkey=Gene;gene=frlC;gene_biotype=protein_coding;locus_tag=PHA55_RS22345;old_locus_tag=PHA55_22340
NZ_CP116044.1	Protein Homology	CDS	4563709	4564539	.	+	0	ID=cds-WP_000847834.1;Parent=gene-PHA55_RS22345;Dbxref=Genbank:WP_000847834.1;Name=WP_000847834.1;gbkey=CDS;gene=frlC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026213.1;locus_tag=PHA55_RS22345;product=fructoselysine 3-epimerase;protein_id=WP_000847834.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4564536	4565321	.	+	.	ID=gene-PHA55_RS22350;Name=frlD;gbkey=Gene;gene=frlD;gene_biotype=protein_coding;locus_tag=PHA55_RS22350;old_locus_tag=PHA55_22345
NZ_CP116044.1	Protein Homology	CDS	4564536	4565321	.	+	0	ID=cds-WP_000853361.1;Parent=gene-PHA55_RS22350;Dbxref=Genbank:WP_000853361.1;Name=WP_000853361.1;gbkey=CDS;gene=frlD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709147.1;locus_tag=PHA55_RS22350;product=fructoselysine 6-kinase;protein_id=WP_000853361.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4565421	4566152	.	+	.	ID=gene-PHA55_RS22355;Name=frlR;gbkey=Gene;gene=frlR;gene_biotype=protein_coding;gene_synonym=yhfR;locus_tag=PHA55_RS22355;old_locus_tag=PHA55_22350
NZ_CP116044.1	Protein Homology	CDS	4565421	4566152	.	+	0	ID=cds-WP_001276847.1;Parent=gene-PHA55_RS22355;Dbxref=Genbank:WP_001276847.1;Name=WP_001276847.1;gbkey=CDS;gene=frlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417834.6;locus_tag=PHA55_RS22355;product=DNA-binding transcriptional regulator FrlR;protein_id=WP_001276847.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4566304	4567389	.	-	.	ID=gene-PHA55_RS22360;Name=yhfS;gbkey=Gene;gene=yhfS;gene_biotype=protein_coding;locus_tag=PHA55_RS22360;old_locus_tag=PHA55_22355
NZ_CP116044.1	Protein Homology	CDS	4566304	4567389	.	-	0	ID=cds-WP_000847144.1;Parent=gene-PHA55_RS22360;Dbxref=Genbank:WP_000847144.1;Name=WP_000847144.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;gene=yhfS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417835.1;locus_tag=PHA55_RS22360;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_000847144.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4567401	4568705	.	-	.	ID=gene-PHA55_RS22365;Name=yhfT;gbkey=Gene;gene=yhfT;gene_biotype=protein_coding;locus_tag=PHA55_RS22365;old_locus_tag=PHA55_22360
NZ_CP116044.1	Protein Homology	CDS	4567401	4568705	.	-	0	ID=cds-WP_000366877.1;Parent=gene-PHA55_RS22365;Dbxref=Genbank:WP_000366877.1;Name=WP_000366877.1;gbkey=CDS;gene=yhfT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709150.1;locus_tag=PHA55_RS22365;product=YhfT family protein;protein_id=WP_000366877.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4568717	4569070	.	-	.	ID=gene-PHA55_RS22370;Name=yhfU;gbkey=Gene;gene=yhfU;gene_biotype=protein_coding;locus_tag=PHA55_RS22370;old_locus_tag=PHA55_22365
NZ_CP116044.1	Protein Homology	CDS	4568717	4569070	.	-	0	ID=cds-WP_001297518.1;Parent=gene-PHA55_RS22370;Dbxref=Genbank:WP_001297518.1;Name=WP_001297518.1;gbkey=CDS;gene=yhfU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417837.2;locus_tag=PHA55_RS22370;product=DUF2620 domain-containing protein;protein_id=WP_001297518.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4569081	4569959	.	-	.	ID=gene-PHA55_RS22375;Name=php;gbkey=Gene;gene=php;gene_biotype=protein_coding;locus_tag=PHA55_RS22375;old_locus_tag=PHA55_22370
NZ_CP116044.1	Protein Homology	CDS	4569081	4569959	.	-	0	ID=cds-WP_000007002.1;Parent=gene-PHA55_RS22375;Dbxref=Genbank:WP_000007002.1;Name=WP_000007002.1;gbkey=CDS;gene=php;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417838.1;locus_tag=PHA55_RS22375;product=phosphotriesterase-related protein;protein_id=WP_000007002.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4569956	4571182	.	-	.	ID=gene-PHA55_RS22380;Name=yhfW;gbkey=Gene;gene=yhfW;gene_biotype=protein_coding;locus_tag=PHA55_RS22380;old_locus_tag=PHA55_22375
NZ_CP116044.1	Protein Homology	CDS	4569956	4571182	.	-	0	ID=cds-WP_000090600.1;Parent=gene-PHA55_RS22380;Dbxref=Genbank:WP_000090600.1;Name=WP_000090600.1;Ontology_term=GO:0008973;gbkey=CDS;gene=yhfW;go_function=phosphopentomutase activity|0008973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417839.1;locus_tag=PHA55_RS22380;product=phosphopentomutase;protein_id=WP_000090600.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4571182	4572345	.	-	.	ID=gene-PHA55_RS22385;Name=yhfX;gbkey=Gene;gene=yhfX;gene_biotype=protein_coding;locus_tag=PHA55_RS22385;old_locus_tag=PHA55_22380
NZ_CP116044.1	Protein Homology	CDS	4571182	4572345	.	-	0	ID=cds-WP_000497372.1;Parent=gene-PHA55_RS22385;Dbxref=Genbank:WP_000497372.1;Name=WP_000497372.1;gbkey=CDS;gene=yhfX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709154.1;locus_tag=PHA55_RS22385;product=YhfX family PLP-dependent enzyme;protein_id=WP_000497372.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4572429	4572791	.	-	.	ID=gene-PHA55_RS22390;Name=yhfY;gbkey=Gene;gene=yhfY;gene_biotype=protein_coding;locus_tag=PHA55_RS22390;old_locus_tag=PHA55_22385
NZ_CP116044.1	Protein Homology	CDS	4572429	4572791	.	-	0	ID=cds-WP_001295165.1;Parent=gene-PHA55_RS22390;Dbxref=Genbank:WP_001295165.1;Name=WP_001295165.1;gbkey=CDS;gene=yhfY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417841.2;locus_tag=PHA55_RS22390;product=PRD domain protein;protein_id=WP_001295165.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4572808	4573713	.	-	.	ID=gene-PHA55_RS22395;Name=yhfZ;gbkey=Gene;gene=yhfZ;gene_biotype=protein_coding;locus_tag=PHA55_RS22395;old_locus_tag=PHA55_22390
NZ_CP116044.1	Protein Homology	CDS	4572808	4573713	.	-	0	ID=cds-WP_001254820.1;Parent=gene-PHA55_RS22395;Dbxref=Genbank:WP_001254820.1;Name=WP_001254820.1;gbkey=CDS;gene=yhfZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026214.1;locus_tag=PHA55_RS22395;product=GntR family transcriptional regulator YhfZ;protein_id=WP_001254820.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4573982	4574986	.	-	.	ID=gene-PHA55_RS22400;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=PHA55_RS22400;old_locus_tag=PHA55_22395
NZ_CP116044.1	Protein Homology	CDS	4573982	4574986	.	-	0	ID=cds-WP_000165553.1;Parent=gene-PHA55_RS22400;Dbxref=Genbank:WP_000165553.1;Name=WP_000165553.1;Ontology_term=GO:0006436,GO:0004830,GO:0005737;gbkey=CDS;gene=trpS;go_component=cytoplasm|0005737||IEA;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417843.1;locus_tag=PHA55_RS22400;product=tryptophan--tRNA ligase;protein_id=WP_000165553.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4574979	4575737	.	-	.	ID=gene-PHA55_RS22405;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=PHA55_RS22405;old_locus_tag=PHA55_22400
NZ_CP116044.1	Protein Homology	CDS	4574979	4575737	.	-	0	ID=cds-WP_001031705.1;Parent=gene-PHA55_RS22405;Dbxref=Genbank:WP_001031705.1;Name=WP_001031705.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709158.1;locus_tag=PHA55_RS22405;product=phosphoglycolate phosphatase;protein_id=WP_001031705.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4575730	4576407	.	-	.	ID=gene-PHA55_RS22410;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=PHA55_RS22410;old_locus_tag=PHA55_22405
NZ_CP116044.1	Protein Homology	CDS	4575730	4576407	.	-	0	ID=cds-WP_000816280.1;Parent=gene-PHA55_RS22410;Dbxref=Genbank:WP_000816280.1;Name=WP_000816280.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312255.1;locus_tag=PHA55_RS22410;product=ribulose-phosphate 3-epimerase;protein_id=WP_000816280.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4576425	4577261	.	-	.	ID=gene-PHA55_RS22415;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=PHA55_RS22415;old_locus_tag=PHA55_22410
NZ_CP116044.1	Protein Homology	CDS	4576425	4577261	.	-	0	ID=cds-WP_000742143.1;Parent=gene-PHA55_RS22415;Dbxref=Genbank:WP_000742143.1;Name=WP_000742143.1;Ontology_term=GO:0032775,GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312256.1;locus_tag=PHA55_RS22415;product=adenine-specific DNA-methyltransferase;protein_id=WP_000742143.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4577368	4578654	.	-	.	ID=gene-PHA55_RS22420;Name=damX;gbkey=Gene;gene=damX;gene_biotype=protein_coding;locus_tag=PHA55_RS22420;old_locus_tag=PHA55_22415
NZ_CP116044.1	Protein Homology	CDS	4577368	4578654	.	-	0	ID=cds-WP_000343195.1;Parent=gene-PHA55_RS22420;Dbxref=Genbank:WP_000343195.1;Name=WP_000343195.1;Ontology_term=GO:0032506,GO:0042834;gbkey=CDS;gene=damX;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312257.1;locus_tag=PHA55_RS22420;product=cell division protein DamX;protein_id=WP_000343195.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4578746	4579834	.	-	.	ID=gene-PHA55_RS22425;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=PHA55_RS22425;old_locus_tag=PHA55_22420
NZ_CP116044.1	Protein Homology	CDS	4578746	4579834	.	-	0	ID=cds-WP_000439846.1;Parent=gene-PHA55_RS22425;Dbxref=Genbank:WP_000439846.1;Name=WP_000439846.1;Ontology_term=GO:0009423,GO:0003856;gbkey=CDS;gene=aroB;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417848.1;locus_tag=PHA55_RS22425;product=3-dehydroquinate synthase;protein_id=WP_000439846.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4579891	4580412	.	-	.	ID=gene-PHA55_RS22430;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=PHA55_RS22430;old_locus_tag=PHA55_22425
NZ_CP116044.1	Protein Homology	CDS	4579891	4580412	.	-	0	ID=cds-WP_000818618.1;Parent=gene-PHA55_RS22430;Dbxref=Genbank:WP_000818618.1;Name=WP_000818618.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=PHA55_RS22430;product=shikimate kinase AroK;protein_id=WP_000818618.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4580813	4582051	.	-	.	ID=gene-PHA55_RS22435;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=PHA55_RS22435;old_locus_tag=PHA55_22430
NZ_CP116044.1	Protein Homology	CDS	4580813	4582051	.	-	0	ID=cds-WP_000815976.1;Parent=gene-PHA55_RS22435;Dbxref=Genbank:WP_000815976.1;Name=WP_000815976.1;Ontology_term=GO:0009306,GO:0019867;gbkey=CDS;gene=hofQ;go_component=outer membrane|0019867||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417850.1;locus_tag=PHA55_RS22435;product=DNA uptake porin HofQ;protein_id=WP_000815976.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4581963	4582367	.	-	.	ID=gene-PHA55_RS22440;Name=hofP;gbkey=Gene;gene=hofP;gene_biotype=protein_coding;locus_tag=PHA55_RS22440;old_locus_tag=PHA55_22435
NZ_CP116044.1	Protein Homology	CDS	4581963	4582367	.	-	0	ID=cds-WP_001264141.1;Parent=gene-PHA55_RS22440;Dbxref=Genbank:WP_001264141.1;Name=WP_001264141.1;gbkey=CDS;gene=hofP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417851.4;locus_tag=PHA55_RS22440;product=DNA utilization protein HofP;protein_id=WP_001264141.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4582357	4582797	.	-	.	ID=gene-PHA55_RS22445;Name=hofO;gbkey=Gene;gene=hofO;gene_biotype=protein_coding;locus_tag=PHA55_RS22445;old_locus_tag=PHA55_22440
NZ_CP116044.1	Protein Homology	CDS	4582357	4582797	.	-	0	ID=cds-WP_001055760.1;Parent=gene-PHA55_RS22445;Dbxref=Genbank:WP_001055760.1;Name=WP_001055760.1;gbkey=CDS;gene=hofO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417852.1;locus_tag=PHA55_RS22445;product=DNA utilization protein HofO;protein_id=WP_001055760.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4582781	4583320	.	-	.	ID=gene-PHA55_RS22450;Name=hofN;gbkey=Gene;gene=hofN;gene_biotype=protein_coding;locus_tag=PHA55_RS22450;old_locus_tag=PHA55_22445
NZ_CP116044.1	Protein Homology	CDS	4582781	4583320	.	-	0	ID=cds-WP_001069315.1;Parent=gene-PHA55_RS22450;Dbxref=Genbank:WP_001069315.1;Name=WP_001069315.1;gbkey=CDS;gene=hofN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417853.1;locus_tag=PHA55_RS22450;product=DNA utilization protein HofN;protein_id=WP_001069315.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4583320	4584099	.	-	.	ID=gene-PHA55_RS22455;Name=hofM;gbkey=Gene;gene=hofM;gene_biotype=protein_coding;locus_tag=PHA55_RS22455;old_locus_tag=PHA55_22450
NZ_CP116044.1	Protein Homology	CDS	4583320	4584099	.	-	0	ID=cds-WP_001315880.1;Parent=gene-PHA55_RS22455;Dbxref=Genbank:WP_001315880.1;Name=WP_001315880.1;gbkey=CDS;gene=hofM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417854.4;locus_tag=PHA55_RS22455;product=DNA utilization protein HofM;protein_id=WP_001315880.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4584219	4586771	.	+	.	ID=gene-PHA55_RS22460;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=PHA55_RS22460;old_locus_tag=PHA55_22455
NZ_CP116044.1	Protein Homology	CDS	4584219	4586771	.	+	0	ID=cds-WP_000673804.1;Parent=gene-PHA55_RS22460;Dbxref=Genbank:WP_000673804.1;Name=WP_000673804.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417855.4;locus_tag=PHA55_RS22460;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=WP_000673804.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4586936	4587496	.	-	.	ID=gene-PHA55_RS22465;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=PHA55_RS22465;old_locus_tag=PHA55_22460
NZ_CP116044.1	Protein Homology	CDS	4586936	4587496	.	-	0	ID=cds-WP_000045744.1;Parent=gene-PHA55_RS22465;Dbxref=Genbank:WP_000045744.1;Name=WP_000045744.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417856.1;locus_tag=PHA55_RS22465;product=ADP compounds hydrolase NudE;protein_id=WP_000045744.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4587816	4589951	.	+	.	ID=gene-PHA55_RS22470;Name=igaA;gbkey=Gene;gene=igaA;gene_biotype=protein_coding;locus_tag=PHA55_RS22470;old_locus_tag=PHA55_22465
NZ_CP116044.1	Protein Homology	CDS	4587816	4589951	.	+	0	ID=cds-WP_000104549.1;Parent=gene-PHA55_RS22470;Dbxref=Genbank:WP_000104549.1;Name=WP_000104549.1;gbkey=CDS;gene=igaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417857.1;locus_tag=PHA55_RS22470;product=intracellular growth attenuator protein IgaA;protein_id=WP_000104549.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4590016	4590684	.	+	.	ID=gene-PHA55_RS22475;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=PHA55_RS22475;old_locus_tag=PHA55_22470
NZ_CP116044.1	Protein Homology	CDS	4590016	4590684	.	+	0	ID=cds-WP_001297395.1;Parent=gene-PHA55_RS22475;Dbxref=Genbank:WP_001297395.1;Name=WP_001297395.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312268.2;locus_tag=PHA55_RS22475;product=GMP/IMP nucleotidase;protein_id=WP_001297395.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4590695	4591096	.	+	.	ID=gene-PHA55_RS22480;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=PHA55_RS22480;old_locus_tag=PHA55_22475
NZ_CP116044.1	Protein Homology	CDS	4590695	4591096	.	+	0	ID=cds-WP_000660483.1;Parent=gene-PHA55_RS22480;Dbxref=Genbank:WP_000660483.1;Name=WP_000660483.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312269.1;locus_tag=PHA55_RS22480;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_000660483.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4591121	4591999	.	+	.	ID=gene-PHA55_RS22485;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=PHA55_RS22485;old_locus_tag=PHA55_22480
NZ_CP116044.1	Protein Homology	CDS	4591121	4591999	.	+	0	ID=cds-WP_001135574.1;Parent=gene-PHA55_RS22485;Dbxref=Genbank:WP_001135574.1;Name=WP_001135574.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417860.2;locus_tag=PHA55_RS22485;product=Hsp33 family molecular chaperone HslO;protein_id=WP_001135574.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4592134	4593858	.	-	.	ID=gene-PHA55_RS22490;Name=yhgE;gbkey=Gene;gene=yhgE;gene_biotype=protein_coding;locus_tag=PHA55_RS22490;old_locus_tag=PHA55_22485
NZ_CP116044.1	Protein Homology	CDS	4592134	4593858	.	-	0	ID=cds-WP_271287477.1;Parent=gene-PHA55_RS22490;Dbxref=Genbank:WP_271287477.1;Name=WP_271287477.1;gbkey=CDS;gene=yhgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417861.1;locus_tag=PHA55_RS22490;product=DUF4153 domain-containing protein;protein_id=WP_271287477.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4594237	4595859	.	+	.	ID=gene-PHA55_RS22495;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=PHA55_RS22495;old_locus_tag=PHA55_22490
NZ_CP116044.1	Protein Homology	CDS	4594237	4595859	.	+	0	ID=cds-WP_001309803.1;Parent=gene-PHA55_RS22495;Dbxref=Genbank:WP_001309803.1;Name=WP_001309803.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312272.1;locus_tag=PHA55_RS22495;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_001309803.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4595976	4596293	.	+	.	ID=gene-PHA55_RS22500;Name=PHA55_RS22500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS22500;old_locus_tag=PHA55_22495
NZ_CP116044.1	Protein Homology	CDS	4595976	4596293	.	+	0	ID=cds-WP_000493756.1;Parent=gene-PHA55_RS22500;Dbxref=Genbank:WP_000493756.1;Name=WP_000493756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000493756.1;locus_tag=PHA55_RS22500;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_000493756.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4596352	4596648	.	+	.	ID=gene-PHA55_RS22505;Name=nadS;gbkey=Gene;gene=nadS;gene_biotype=protein_coding;locus_tag=PHA55_RS22505;old_locus_tag=PHA55_22500
NZ_CP116044.1	Protein Homology	CDS	4596352	4596648	.	+	0	ID=cds-WP_000650976.1;Parent=gene-PHA55_RS22505;Dbxref=Genbank:WP_000650976.1;Name=WP_000650976.1;gbkey=CDS;gene=nadS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227164.1;locus_tag=PHA55_RS22505;product=NadS family protein;protein_id=WP_000650976.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4596680	4598032	.	-	.	ID=gene-PHA55_RS22510;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=PHA55_RS22510;old_locus_tag=PHA55_22505
NZ_CP116044.1	Protein Homology	CDS	4596680	4598032	.	-	0	ID=cds-WP_001253696.1;Parent=gene-PHA55_RS22510;Dbxref=Genbank:WP_001253696.1;Name=WP_001253696.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417863.1;locus_tag=PHA55_RS22510;product=two-component system sensor histidine kinase EnvZ;protein_id=WP_001253696.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4598029	4598748	.	-	.	ID=gene-PHA55_RS22515;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=PHA55_RS22515;old_locus_tag=PHA55_22510
NZ_CP116044.1	Protein Homology	CDS	4598029	4598748	.	-	0	ID=cds-WP_001157751.1;Parent=gene-PHA55_RS22515;Dbxref=Genbank:WP_001157751.1;Name=WP_001157751.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014646135.1;locus_tag=PHA55_RS22515;product=two-component system response regulator OmpR;protein_id=WP_001157751.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4598976	4599452	.	+	.	ID=gene-PHA55_RS22520;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=PHA55_RS22520;old_locus_tag=PHA55_22515
NZ_CP116044.1	Protein Homology	CDS	4598976	4599452	.	+	0	ID=cds-WP_000856737.1;Parent=gene-PHA55_RS22520;Dbxref=Genbank:WP_000856737.1;Name=WP_000856737.1;Ontology_term=GO:0006354,GO:0003711;gbkey=CDS;gene=greB;go_function=transcription elongation factor activity|0003711||IEA;go_process=DNA-templated transcription elongation|0006354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026216.2;locus_tag=PHA55_RS22520;product=transcription elongation factor GreB;protein_id=WP_000856737.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4599549	4601870	.	+	.	ID=gene-PHA55_RS22525;Name=yhgF;gbkey=Gene;gene=yhgF;gene_biotype=protein_coding;locus_tag=PHA55_RS22525;old_locus_tag=PHA55_22520
NZ_CP116044.1	Protein Homology	CDS	4599549	4601870	.	+	0	ID=cds-WP_000980701.1;Parent=gene-PHA55_RS22525;Dbxref=Genbank:WP_000980701.1;Name=WP_000980701.1;gbkey=CDS;gene=yhgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417866.4;locus_tag=PHA55_RS22525;product=Tex family protein;protein_id=WP_000980701.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4602308	4602535	.	+	.	ID=gene-PHA55_RS22530;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=PHA55_RS22530;old_locus_tag=PHA55_22525
NZ_CP116044.1	Protein Homology	CDS	4602308	4602535	.	+	0	ID=cds-WP_001200455.1;Parent=gene-PHA55_RS22530;Dbxref=Genbank:WP_001200455.1;Name=WP_001200455.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312277.1;locus_tag=PHA55_RS22530;product=ferrous iron transporter A;protein_id=WP_001200455.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4602552	4604873	.	+	.	ID=gene-PHA55_RS22535;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=PHA55_RS22535;old_locus_tag=PHA55_22530
NZ_CP116044.1	Protein Homology	CDS	4602552	4604873	.	+	0	ID=cds-WP_000737014.1;Parent=gene-PHA55_RS22535;Dbxref=Genbank:WP_000737014.1;Name=WP_000737014.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312278.2;locus_tag=PHA55_RS22535;product=Fe(2+) transporter permease subunit FeoB;protein_id=WP_000737014.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4604873	4605109	.	+	.	ID=gene-PHA55_RS22540;Name=feoC;gbkey=Gene;gene=feoC;gene_biotype=protein_coding;locus_tag=PHA55_RS22540;old_locus_tag=PHA55_22535
NZ_CP116044.1	Protein Homology	CDS	4604873	4605109	.	+	0	ID=cds-WP_001352764.1;Parent=gene-PHA55_RS22540;Dbxref=Genbank:WP_001352764.1;Name=WP_001352764.1;gbkey=CDS;gene=feoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312279.1;locus_tag=PHA55_RS22540;product=[Fe-S]-dependent transcriptional repressor FeoC;protein_id=WP_001352764.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4605312	4606190	.	+	.	ID=gene-PHA55_RS22545;Name=rpnA;gbkey=Gene;gene=rpnA;gene_biotype=protein_coding;locus_tag=PHA55_RS22545;old_locus_tag=PHA55_22540
NZ_CP116044.1	Protein Homology	CDS	4605312	4606190	.	+	0	ID=cds-WP_000039069.1;Parent=gene-PHA55_RS22545;Dbxref=Genbank:WP_000039069.1;Name=WP_000039069.1;gbkey=CDS;gene=rpnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417870.1;locus_tag=PHA55_RS22545;product=recombination-promoting nuclease RpnA;protein_id=WP_000039069.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4606219	4606989	.	-	.	ID=gene-PHA55_RS22550;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=PHA55_RS22550;old_locus_tag=PHA55_22545
NZ_CP116044.1	Protein Homology	CDS	4606219	4606989	.	-	0	ID=cds-WP_001060069.1;Parent=gene-PHA55_RS22550;Dbxref=Genbank:WP_001060069.1;Name=WP_001060069.1;Ontology_term=GO:0052689;gbkey=CDS;gene=bioH;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417871.1;locus_tag=PHA55_RS22550;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_001060069.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4607027	4607710	.	+	.	ID=gene-PHA55_RS22555;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=PHA55_RS22555;old_locus_tag=PHA55_22550
NZ_CP116044.1	Protein Homology	CDS	4607027	4607710	.	+	0	ID=cds-WP_001298725.1;Parent=gene-PHA55_RS22555;Dbxref=Genbank:WP_001298725.1;Name=WP_001298725.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gntX;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417872.2;locus_tag=PHA55_RS22555;product=DNA utilization protein GntX;protein_id=WP_001298725.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4607769	4608344	.	+	.	ID=gene-PHA55_RS22560;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=PHA55_RS22560;old_locus_tag=PHA55_22555
NZ_CP116044.1	Protein Homology	CDS	4607769	4608344	.	+	0	ID=cds-WP_000619389.1;Parent=gene-PHA55_RS22560;Dbxref=Genbank:WP_000619389.1;Name=WP_000619389.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=PHA55_RS22560;product=Fe-S biogenesis protein NfuA;protein_id=WP_000619389.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4608705	4610021	.	+	.	ID=gene-PHA55_RS22565;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;locus_tag=PHA55_RS22565;old_locus_tag=PHA55_22560
NZ_CP116044.1	Protein Homology	CDS	4608705	4610021	.	+	0	ID=cds-WP_001131758.1;Parent=gene-PHA55_RS22565;Dbxref=Genbank:WP_001131758.1;Name=WP_001131758.1;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312284.1;locus_tag=PHA55_RS22565;product=gluconate transporter;protein_id=WP_001131758.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4610066	4612150	.	-	.	ID=gene-PHA55_RS22570;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=PHA55_RS22570;old_locus_tag=PHA55_22565
NZ_CP116044.1	Protein Homology	CDS	4610066	4612150	.	-	0	ID=cds-WP_262935516.1;Parent=gene-PHA55_RS22570;Dbxref=Genbank:WP_262935516.1;Name=WP_262935516.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417875.1;locus_tag=PHA55_RS22570;product=4-alpha-glucanotransferase;protein_id=WP_262935516.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4612160	4614553	.	-	.	ID=gene-PHA55_RS22575;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=PHA55_RS22575;old_locus_tag=PHA55_22570
NZ_CP116044.1	Protein Homology	CDS	4612160	4614553	.	-	0	ID=cds-WP_000081909.1;Parent=gene-PHA55_RS22575;Dbxref=Genbank:WP_000081909.1;Name=WP_000081909.1;Ontology_term=GO:0005975,GO:0008184,GO:0030170;gbkey=CDS;gene=malP;go_function=glycogen phosphorylase activity|0008184||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026218.1;locus_tag=PHA55_RS22575;product=maltodextrin phosphorylase;protein_id=WP_000081909.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4615165	4617870	.	+	.	ID=gene-PHA55_RS22580;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=PHA55_RS22580;old_locus_tag=PHA55_22575
NZ_CP116044.1	Protein Homology	CDS	4615165	4617870	.	+	0	ID=cds-WP_000906960.1;Parent=gene-PHA55_RS22580;Dbxref=Genbank:WP_000906960.1;Name=WP_000906960.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312287.1;locus_tag=PHA55_RS22580;product=HTH-type transcriptional regulator MalT;protein_id=WP_000906960.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4617913	4618929	.	-	.	ID=gene-PHA55_RS22585;Name=rtcA;gbkey=Gene;gene=rtcA;gene_biotype=protein_coding;locus_tag=PHA55_RS22585;old_locus_tag=PHA55_22580
NZ_CP116044.1	Protein Homology	CDS	4617913	4618929	.	-	0	ID=cds-WP_001341929.1;Parent=gene-PHA55_RS22585;Dbxref=Genbank:WP_001341929.1;Name=WP_001341929.1;Ontology_term=GO:0006396,GO:0003963;gbkey=CDS;gene=rtcA;go_function=RNA-3'-phosphate cyclase activity|0003963||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026219.1;locus_tag=PHA55_RS22585;product=RNA 3'-terminal phosphate cyclase;protein_id=WP_001341929.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4618933	4620159	.	-	.	ID=gene-PHA55_RS22590;Name=rtcB;gbkey=Gene;gene=rtcB;gene_biotype=protein_coding;locus_tag=PHA55_RS22590;old_locus_tag=PHA55_22585
NZ_CP116044.1	Protein Homology	CDS	4618933	4620159	.	-	0	ID=cds-WP_001105493.1;Parent=gene-PHA55_RS22590;Dbxref=Genbank:WP_001105493.1;Name=WP_001105493.1;gbkey=CDS;gene=rtcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417879.1;locus_tag=PHA55_RS22590;product=RNA-splicing ligase RtcB;protein_id=WP_001105493.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4620348	4621946	.	+	.	ID=gene-PHA55_RS22595;Name=rtcR;gbkey=Gene;gene=rtcR;gene_biotype=protein_coding;locus_tag=PHA55_RS22595;old_locus_tag=PHA55_22590
NZ_CP116044.1	Protein Homology	CDS	4620348	4621946	.	+	0	ID=cds-WP_001232977.1;Parent=gene-PHA55_RS22595;Dbxref=Genbank:WP_001232977.1;Name=WP_001232977.1;gbkey=CDS;gene=rtcR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417880.1;locus_tag=PHA55_RS22595;product=DNA-binding transcriptional regulator RtcR;protein_id=WP_001232977.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4621928	4622686	.	-	.	ID=gene-PHA55_RS22600;Name=PHA55_RS22600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS22600;old_locus_tag=PHA55_22595
NZ_CP116044.1	Protein Homology	CDS	4621928	4622686	.	-	0	ID=cds-WP_000815099.1;Parent=gene-PHA55_RS22600;Dbxref=Genbank:WP_000815099.1;Name=WP_000815099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=PHA55_RS22600;product=DeoR/GlpR family transcriptional regulator;protein_id=WP_000815099.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4622703	4623533	.	-	.	ID=gene-PHA55_RS22605;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=PHA55_RS22605;old_locus_tag=PHA55_22600
NZ_CP116044.1	Protein Homology	CDS	4622703	4623533	.	-	0	ID=cds-WP_000928731.1;Parent=gene-PHA55_RS22605;Dbxref=Genbank:WP_000928731.1;Name=WP_000928731.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026220.1;locus_tag=PHA55_RS22605;product=rhomboid family intramembrane serine protease GlpG;protein_id=WP_000928731.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4623578	4623904	.	-	.	ID=gene-PHA55_RS22610;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=PHA55_RS22610;old_locus_tag=PHA55_22605
NZ_CP116044.1	Protein Homology	CDS	4623578	4623904	.	-	0	ID=cds-WP_000371934.1;Parent=gene-PHA55_RS22610;Dbxref=Genbank:WP_000371934.1;Name=WP_000371934.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417883.1;locus_tag=PHA55_RS22610;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_000371934.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4624094	4625599	.	+	.	ID=gene-PHA55_RS22615;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=PHA55_RS22615;old_locus_tag=PHA55_22610
NZ_CP116044.1	Protein Homology	CDS	4624094	4625599	.	+	0	ID=cds-WP_000448140.1;Parent=gene-PHA55_RS22615;Dbxref=Genbank:WP_000448140.1;Name=WP_000448140.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312296.1;locus_tag=PHA55_RS22615;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_000448140.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4625653	4626258	.	-	.	ID=gene-PHA55_RS22620;Name=PHA55_RS22620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS22620;old_locus_tag=PHA55_22615
NZ_CP116044.1	Protein Homology	CDS	4625653	4626258	.	-	0	ID=cds-WP_000589355.1;Parent=gene-PHA55_RS22620;Dbxref=Genbank:WP_000589355.1;Name=WP_000589355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000589351.1;locus_tag=PHA55_RS22620;product=hypothetical protein;protein_id=WP_000589355.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4626261	4627028	.	-	.	ID=gene-PHA55_RS22625;Name=PHA55_RS22625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS22625;old_locus_tag=PHA55_22620
NZ_CP116044.1	Protein Homology	CDS	4626261	4627028	.	-	0	ID=cds-WP_001183147.1;Parent=gene-PHA55_RS22625;Dbxref=Genbank:WP_001183147.1;Name=WP_001183147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001182130.1;locus_tag=PHA55_RS22625;product=hypothetical protein;protein_id=WP_001183147.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4627031	4627741	.	-	.	ID=gene-PHA55_RS22630;Name=PHA55_RS22630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS22630;old_locus_tag=PHA55_22625
NZ_CP116044.1	Protein Homology	CDS	4627031	4627741	.	-	0	ID=cds-WP_000424560.1;Parent=gene-PHA55_RS22630;Dbxref=Genbank:WP_000424560.1;Name=WP_000424560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000424214.1;locus_tag=PHA55_RS22630;product=hypothetical protein;protein_id=WP_000424560.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4627756	4629264	.	-	.	ID=gene-PHA55_RS22635;Name=PHA55_RS22635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS22635;old_locus_tag=PHA55_22630
NZ_CP116044.1	Protein Homology	CDS	4627756	4629264	.	-	0	ID=cds-WP_122633146.1;Parent=gene-PHA55_RS22635;Dbxref=Genbank:WP_122633146.1;Name=WP_122633146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001349717.1;locus_tag=PHA55_RS22635;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WP_122633146.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4629389	4631836	.	-	.	ID=gene-PHA55_RS22640;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=PHA55_RS22640;old_locus_tag=PHA55_22635
NZ_CP116044.1	Protein Homology	CDS	4629389	4631836	.	-	0	ID=cds-WP_000993455.1;Parent=gene-PHA55_RS22640;Dbxref=Genbank:WP_000993455.1;Name=WP_000993455.1;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;gene=glgP;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417886.1;locus_tag=PHA55_RS22640;product=glycogen phosphorylase;protein_id=WP_000993455.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4631855	4633288	.	-	.	ID=gene-PHA55_RS22645;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=PHA55_RS22645;old_locus_tag=PHA55_22640
NZ_CP116044.1	Protein Homology	CDS	4631855	4633288	.	-	0	ID=cds-WP_001197646.1;Parent=gene-PHA55_RS22645;Dbxref=Genbank:WP_001197646.1;Name=WP_001197646.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=glycogen (starch) synthase activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312301.1;locus_tag=PHA55_RS22645;product=glycogen synthase GlgA;protein_id=WP_001197646.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4633288	4634583	.	-	.	ID=gene-PHA55_RS22650;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=PHA55_RS22650;old_locus_tag=PHA55_22645
NZ_CP116044.1	Protein Homology	CDS	4633288	4634583	.	-	0	ID=cds-WP_000253975.1;Parent=gene-PHA55_RS22650;Dbxref=Genbank:WP_000253975.1;Name=WP_000253975.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312302.1;locus_tag=PHA55_RS22650;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_000253975.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4634601	4636574	.	-	.	ID=gene-PHA55_RS22655;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=PHA55_RS22655;old_locus_tag=PHA55_22650
NZ_CP116044.1	Protein Homology	CDS	4634601	4636574	.	-	0	ID=cds-WP_000192523.1;Parent=gene-PHA55_RS22655;Dbxref=Genbank:WP_000192523.1;Name=WP_000192523.1;Ontology_term=GO:0005980,GO:0004133;gbkey=CDS;gene=glgX;go_function=glycogen debranching enzyme activity|0004133||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417889.1;locus_tag=PHA55_RS22655;product=glycogen debranching protein GlgX;protein_id=WP_000192523.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4636571	4638757	.	-	.	ID=gene-PHA55_RS22660;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=PHA55_RS22660;old_locus_tag=PHA55_22655
NZ_CP116044.1	Protein Homology	CDS	4636571	4638757	.	-	0	ID=cds-WP_001283723.1;Parent=gene-PHA55_RS22660;Dbxref=Genbank:WP_001283723.1;Name=WP_001283723.1;Ontology_term=GO:0005978,GO:0003844;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417890.1;locus_tag=PHA55_RS22660;product=1%2C4-alpha-glucan branching enzyme;protein_id=WP_001283723.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	4638915	4638956	.	-	.	ID=gene-PHA55_RS22665;Name=PHA55_RS22665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS22665;old_locus_tag=PHA55_22660;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	4638915	4638956	.	-	0	ID=cds-PHA55_RS22665;Parent=gene-PHA55_RS22665;Note=too short;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051201.1;locus_tag=PHA55_RS22665;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	4639030	4640133	.	-	.	ID=gene-PHA55_RS22670;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=PHA55_RS22670;old_locus_tag=PHA55_22665
NZ_CP116044.1	Protein Homology	CDS	4639030	4640133	.	-	0	ID=cds-WP_000799956.1;Parent=gene-PHA55_RS22670;Dbxref=Genbank:WP_000799956.1;Name=WP_000799956.1;Ontology_term=GO:0009089,GO:0004073;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312305.1;locus_tag=PHA55_RS22670;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_000799956.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4640326	4640919	.	+	.	ID=gene-PHA55_RS22675;Name=yhgN;gbkey=Gene;gene=yhgN;gene_biotype=protein_coding;locus_tag=PHA55_RS22675;old_locus_tag=PHA55_22670
NZ_CP116044.1	Protein Homology	CDS	4640326	4640919	.	+	0	ID=cds-WP_001002544.1;Parent=gene-PHA55_RS22675;Dbxref=Genbank:WP_001002544.1;Name=WP_001002544.1;gbkey=CDS;gene=yhgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312306.1;locus_tag=PHA55_RS22675;product=NAAT family transporter YhgN;protein_id=WP_001002544.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4640976	4642316	.	-	.	ID=gene-PHA55_RS22680;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=PHA55_RS22680;old_locus_tag=PHA55_22675
NZ_CP116044.1	Protein Homology	CDS	4640976	4642316	.	-	0	ID=cds-WP_000210111.1;Parent=gene-PHA55_RS22680;Dbxref=Genbank:WP_000210111.1;Name=WP_000210111.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=gntU;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312312.1;locus_tag=PHA55_RS22680;product=gluconate transporter;protein_id=WP_000210111.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4642320	4642847	.	-	.	ID=gene-PHA55_RS22685;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=PHA55_RS22685;old_locus_tag=PHA55_22680
NZ_CP116044.1	Protein Homology	CDS	4642320	4642847	.	-	0	ID=cds-WP_000108330.1;Parent=gene-PHA55_RS22685;Dbxref=Genbank:WP_000108330.1;Name=WP_000108330.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417894.2;locus_tag=PHA55_RS22685;product=gluconokinase;protein_id=WP_000108330.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4642986	4643981	.	-	.	ID=gene-PHA55_RS22690;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=PHA55_RS22690;old_locus_tag=PHA55_22685
NZ_CP116044.1	Protein Homology	CDS	4642986	4643981	.	-	0	ID=cds-WP_000730249.1;Parent=gene-PHA55_RS22690;Dbxref=Genbank:WP_000730249.1;Name=WP_000730249.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=PHA55_RS22690;product=gluconate operon transcriptional repressor GntR;protein_id=WP_000730249.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4644205	4644900	.	-	.	ID=gene-PHA55_RS22695;Name=yhhW;gbkey=Gene;gene=yhhW;gene_biotype=protein_coding;locus_tag=PHA55_RS22695;old_locus_tag=PHA55_22690
NZ_CP116044.1	Protein Homology	CDS	4644205	4644900	.	-	0	ID=cds-WP_000639802.1;Parent=gene-PHA55_RS22695;Dbxref=Genbank:WP_000639802.1;Name=WP_000639802.1;gbkey=CDS;gene=yhhW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1;locus_tag=PHA55_RS22695;product=quercetin 2%2C3-dioxygenase;protein_id=WP_000639802.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4645023	4646060	.	-	.	ID=gene-PHA55_RS22700;Name=yhhX;gbkey=Gene;gene=yhhX;gene_biotype=protein_coding;locus_tag=PHA55_RS22700;old_locus_tag=PHA55_22695
NZ_CP116044.1	Protein Homology	CDS	4645023	4646060	.	-	0	ID=cds-WP_000236302.1;Parent=gene-PHA55_RS22700;Dbxref=Genbank:WP_000236302.1;Name=WP_000236302.1;Ontology_term=GO:0000166;gbkey=CDS;gene=yhhX;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709215.2;locus_tag=PHA55_RS22700;product=oxidoreductase;protein_id=WP_000236302.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4646393	4646881	.	+	.	ID=gene-PHA55_RS22705;Name=yhhY;gbkey=Gene;gene=yhhY;gene_biotype=protein_coding;locus_tag=PHA55_RS22705;old_locus_tag=PHA55_22700
NZ_CP116044.1	Protein Homology	CDS	4646393	4646881	.	+	0	ID=cds-WP_001295206.1;Parent=gene-PHA55_RS22705;Dbxref=Genbank:WP_001295206.1;Name=WP_001295206.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yhhY;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417898.1;locus_tag=PHA55_RS22705;product=N-acetyltransferase;protein_id=WP_001295206.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4647118	4648296	.	+	.	ID=gene-PHA55_RS22710;Name=yhhZ;gbkey=Gene;gene=yhhZ;gene_biotype=protein_coding;locus_tag=PHA55_RS22710;old_locus_tag=PHA55_22705
NZ_CP116044.1	Protein Homology	CDS	4647118	4648296	.	+	0	ID=cds-WP_000065902.1;Parent=gene-PHA55_RS22710;Dbxref=Genbank:WP_000065902.1;Name=WP_000065902.1;gbkey=CDS;gene=yhhZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417899.1;locus_tag=PHA55_RS22710;product=Hcp1 family type VI secretion system effector;protein_id=WP_000065902.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4648293	4648787	.	+	.	ID=gene-PHA55_RS22715;Name=yrhA;gbkey=Gene;gene=yrhA;gene_biotype=protein_coding;locus_tag=PHA55_RS22715;old_locus_tag=PHA55_22710
NZ_CP116044.1	Protein Homology	CDS	4648293	4648787	.	+	0	ID=cds-WP_000988496.1;Parent=gene-PHA55_RS22715;Dbxref=Genbank:WP_000988496.1;Name=WP_000988496.1;gbkey=CDS;gene=yrhA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000988499.1;locus_tag=PHA55_RS22715;product=protein YrhA;protein_id=WP_000988496.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4648882	4649037	.	+	.	ID=gene-PHA55_RS22720;Name=yrhD;gbkey=Gene;gene=yrhD;gene_biotype=protein_coding;locus_tag=PHA55_RS22720;old_locus_tag=PHA55_22715
NZ_CP116044.1	Protein Homology	CDS	4648882	4649037	.	+	0	ID=cds-WP_001307436.1;Parent=gene-PHA55_RS22720;Dbxref=Genbank:WP_001307436.1;Name=WP_001307436.1;gbkey=CDS;gene=yrhD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518820.1;locus_tag=PHA55_RS22720;product=protein YrhD;protein_id=WP_001307436.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4649237	4649521	.	+	.	ID=gene-PHA55_RS22725;Name=yrhB;gbkey=Gene;gene=yrhB;gene_biotype=protein_coding;locus_tag=PHA55_RS22725;old_locus_tag=PHA55_22720
NZ_CP116044.1	Protein Homology	CDS	4649237	4649521	.	+	0	ID=cds-WP_000634159.1;Parent=gene-PHA55_RS22725;Dbxref=Genbank:WP_000634159.1;Name=WP_000634159.1;gbkey=CDS;gene=yrhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417903.1;locus_tag=PHA55_RS22725;product=YrhB family protein;protein_id=WP_000634159.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4649559	4651301	.	-	.	ID=gene-PHA55_RS22730;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=PHA55_RS22730;old_locus_tag=PHA55_22725
NZ_CP116044.1	Protein Homology	CDS	4649559	4651301	.	-	0	ID=cds-WP_000595084.1;Parent=gene-PHA55_RS22730;Dbxref=Genbank:WP_000595084.1;Name=WP_000595084.1;Ontology_term=GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417904.1;locus_tag=PHA55_RS22730;product=gamma-glutamyltransferase;protein_id=WP_000595084.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4651421	4651861	.	+	.	ID=gene-PHA55_RS22735;Name=yhhA;gbkey=Gene;gene=yhhA;gene_biotype=protein_coding;locus_tag=PHA55_RS22735;old_locus_tag=PHA55_22730
NZ_CP116044.1	Protein Homology	CDS	4651421	4651861	.	+	0	ID=cds-WP_000825996.1;Parent=gene-PHA55_RS22735;Dbxref=Genbank:WP_000825996.1;Name=WP_000825996.1;gbkey=CDS;gene=yhhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417905.1;locus_tag=PHA55_RS22735;product=DUF2756 family protein;protein_id=WP_000825996.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4651848	4652591	.	-	.	ID=gene-PHA55_RS22740;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=PHA55_RS22740;old_locus_tag=PHA55_22735
NZ_CP116044.1	Protein Homology	CDS	4651848	4652591	.	-	0	ID=cds-WP_000073584.1;Parent=gene-PHA55_RS22740;Dbxref=Genbank:WP_000073584.1;Name=WP_000073584.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312322.1;locus_tag=PHA55_RS22740;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000073584.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4652588	4653658	.	-	.	ID=gene-PHA55_RS22745;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=PHA55_RS22745;old_locus_tag=PHA55_22740
NZ_CP116044.1	Protein Homology	CDS	4652588	4653658	.	-	0	ID=cds-WP_000907797.1;Parent=gene-PHA55_RS22745;Dbxref=Genbank:WP_000907797.1;Name=WP_000907797.1;gbkey=CDS;gene=ugpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312323.2;locus_tag=PHA55_RS22745;product=sn-glycerol 3-phosphate ABC transporter ATP binding protein UgpC;protein_id=WP_000907797.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4653660	4654505	.	-	.	ID=gene-PHA55_RS22750;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=PHA55_RS22750;old_locus_tag=PHA55_22745
NZ_CP116044.1	Protein Homology	CDS	4653660	4654505	.	-	0	ID=cds-WP_000572176.1;Parent=gene-PHA55_RS22750;Dbxref=Genbank:WP_000572176.1;Name=WP_000572176.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=PHA55_RS22750;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_000572176.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4654502	4655389	.	-	.	ID=gene-PHA55_RS22755;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=PHA55_RS22755;old_locus_tag=PHA55_22750
NZ_CP116044.1	Protein Homology	CDS	4654502	4655389	.	-	0	ID=cds-WP_000099289.1;Parent=gene-PHA55_RS22755;Dbxref=Genbank:WP_000099289.1;Name=WP_000099289.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=PHA55_RS22755;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_000099289.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4655487	4656803	.	-	.	ID=gene-PHA55_RS22760;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=PHA55_RS22760;old_locus_tag=PHA55_22755
NZ_CP116044.1	Protein Homology	CDS	4655487	4656803	.	-	0	ID=cds-WP_000803191.1;Parent=gene-PHA55_RS22760;Dbxref=Genbank:WP_000803191.1;Name=WP_000803191.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312326.1;locus_tag=PHA55_RS22760;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_000803191.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4657199	4657912	.	-	.	ID=gene-PHA55_RS22765;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=PHA55_RS22765;old_locus_tag=PHA55_22760
NZ_CP116044.1	Protein Homology	CDS	4657199	4657912	.	-	0	ID=cds-WP_000416895.1;Parent=gene-PHA55_RS22765;Dbxref=Genbank:WP_000416895.1;Name=WP_000416895.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312328.2;locus_tag=PHA55_RS22765;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=WP_000416895.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4657914	4658681	.	-	.	ID=gene-PHA55_RS22770;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=PHA55_RS22770;old_locus_tag=PHA55_22765
NZ_CP116044.1	Protein Homology	CDS	4657914	4658681	.	-	0	ID=cds-WP_000082110.1;Parent=gene-PHA55_RS22770;Dbxref=Genbank:WP_000082110.1;Name=WP_000082110.1;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=PHA55_RS22770;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_000082110.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4658678	4659955	.	-	.	ID=gene-PHA55_RS22775;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=PHA55_RS22775;old_locus_tag=PHA55_22770
NZ_CP116044.1	Protein Homology	CDS	4658678	4659955	.	-	0	ID=cds-WP_000803782.1;Parent=gene-PHA55_RS22775;Dbxref=Genbank:WP_000803782.1;Name=WP_000803782.1;gbkey=CDS;gene=livM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312330.1;locus_tag=PHA55_RS22775;product=branched chain amino acid ABC transporter permease LivM;protein_id=WP_000803782.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4659952	4660878	.	-	.	ID=gene-PHA55_RS22780;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=PHA55_RS22780;old_locus_tag=PHA55_22775
NZ_CP116044.1	Protein Homology	CDS	4659952	4660878	.	-	0	ID=cds-WP_001295111.1;Parent=gene-PHA55_RS22780;Dbxref=Genbank:WP_001295111.1;Name=WP_001295111.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=PHA55_RS22780;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WP_001295111.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4660926	4662035	.	-	.	ID=gene-PHA55_RS22785;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;locus_tag=PHA55_RS22785;old_locus_tag=PHA55_22780
NZ_CP116044.1	Protein Homology	CDS	4660926	4662035	.	-	0	ID=cds-WP_000827696.1;Parent=gene-PHA55_RS22785;Dbxref=Genbank:WP_000827696.1;Name=WP_000827696.1;gbkey=CDS;gene=livK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417915.1;locus_tag=PHA55_RS22785;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;protein_id=WP_000827696.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4662459	4662842	.	+	.	ID=gene-PHA55_RS22790;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=PHA55_RS22790;old_locus_tag=PHA55_22785
NZ_CP116044.1	Protein Homology	CDS	4662459	4662842	.	+	0	ID=cds-WP_000778785.1;Parent=gene-PHA55_RS22790;Dbxref=Genbank:WP_000778785.1;Name=WP_000778785.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709229.1;locus_tag=PHA55_RS22790;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WP_000778785.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4663041	4664144	.	-	.	ID=gene-PHA55_RS22795;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;locus_tag=PHA55_RS22795;old_locus_tag=PHA55_22790
NZ_CP116044.1	Protein Homology	CDS	4663041	4664144	.	-	0	ID=cds-WP_001021996.1;Parent=gene-PHA55_RS22795;Dbxref=Genbank:WP_001021996.1;Name=WP_001021996.1;gbkey=CDS;gene=livJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026223.1;locus_tag=PHA55_RS22795;product=branched chain amino acid ABC transporter substrate-binding protein LivJ;protein_id=WP_001021996.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4664415	4665269	.	-	.	ID=gene-PHA55_RS22800;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=PHA55_RS22800;old_locus_tag=PHA55_22795
NZ_CP116044.1	Protein Homology	CDS	4664415	4665269	.	-	0	ID=cds-WP_000130217.1;Parent=gene-PHA55_RS22800;Dbxref=Genbank:WP_000130217.1;Name=WP_000130217.1;Ontology_term=GO:0006352,GO:0016987;gbkey=CDS;gene=rpoH;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312337.1;locus_tag=PHA55_RS22800;product=RNA polymerase sigma factor RpoH;protein_id=WP_000130217.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4665514	4666572	.	-	.	ID=gene-PHA55_RS22805;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=PHA55_RS22805;old_locus_tag=PHA55_22800
NZ_CP116044.1	Protein Homology	CDS	4665514	4666572	.	-	0	ID=cds-WP_001042003.1;Parent=gene-PHA55_RS22805;Dbxref=Genbank:WP_001042003.1;Name=WP_001042003.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417919.1;locus_tag=PHA55_RS22805;product=permease-like cell division protein FtsX;protein_id=WP_001042003.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4666565	4667233	.	-	.	ID=gene-PHA55_RS22810;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=PHA55_RS22810;old_locus_tag=PHA55_22805
NZ_CP116044.1	Protein Homology	CDS	4666565	4667233	.	-	0	ID=cds-WP_000617723.1;Parent=gene-PHA55_RS22810;Dbxref=Genbank:WP_000617723.1;Name=WP_000617723.1;gbkey=CDS;gene=ftsE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312339.1;locus_tag=PHA55_RS22810;product=cell division ATP-binding protein FtsE;protein_id=WP_000617723.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4667236	4668732	.	-	.	ID=gene-PHA55_RS22815;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=PHA55_RS22815;old_locus_tag=PHA55_22810
NZ_CP116044.1	Protein Homology	CDS	4667236	4668732	.	-	0	ID=cds-WP_001040689.1;Parent=gene-PHA55_RS22815;Dbxref=Genbank:WP_001040689.1;Name=WP_001040689.1;Ontology_term=GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312340.1;locus_tag=PHA55_RS22815;product=signal recognition particle-docking protein FtsY;protein_id=WP_001040689.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4668882	4669478	.	+	.	ID=gene-PHA55_RS22820;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=PHA55_RS22820;old_locus_tag=PHA55_22815
NZ_CP116044.1	Protein Homology	CDS	4668882	4669478	.	+	0	ID=cds-WP_000743193.1;Parent=gene-PHA55_RS22820;Dbxref=Genbank:WP_000743193.1;Name=WP_000743193.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417922.1;locus_tag=PHA55_RS22820;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WP_000743193.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4669468	4669737	.	+	.	ID=gene-PHA55_RS22825;Name=yhhL;gbkey=Gene;gene=yhhL;gene_biotype=protein_coding;locus_tag=PHA55_RS22825;old_locus_tag=PHA55_22820
NZ_CP116044.1	Protein Homology	CDS	4669468	4669737	.	+	0	ID=cds-WP_001295207.1;Parent=gene-PHA55_RS22825;Dbxref=Genbank:WP_001295207.1;Name=WP_001295207.1;gbkey=CDS;gene=yhhL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312342.1;locus_tag=PHA55_RS22825;product=DUF1145 family protein;protein_id=WP_001295207.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4669740	4670099	.	-	.	ID=gene-PHA55_RS22830;Name=yhhM;gbkey=Gene;gene=yhhM;gene_biotype=protein_coding;locus_tag=PHA55_RS22830;old_locus_tag=PHA55_22825
NZ_CP116044.1	Protein Homology	CDS	4669740	4670099	.	-	0	ID=cds-WP_260589857.1;Parent=gene-PHA55_RS22830;Dbxref=Genbank:WP_260589857.1;Name=WP_260589857.1;gbkey=CDS;gene=yhhM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312343.1;locus_tag=PHA55_RS22830;product=DUF2500 domain-containing protein;protein_id=WP_260589857.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4670240	4670866	.	+	.	ID=gene-PHA55_RS22835;Name=yhhN;gbkey=Gene;gene=yhhN;gene_biotype=protein_coding;locus_tag=PHA55_RS22835;old_locus_tag=PHA55_22830
NZ_CP116044.1	Protein Homology	CDS	4670240	4670866	.	+	0	ID=cds-WP_000964718.1;Parent=gene-PHA55_RS22835;Dbxref=Genbank:WP_000964718.1;Name=WP_000964718.1;gbkey=CDS;gene=yhhN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312344.1;locus_tag=PHA55_RS22835;product=lysoplasmalogenase;protein_id=WP_000964718.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4670940	4673138	.	+	.	ID=gene-PHA55_RS22840;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=PHA55_RS22840;old_locus_tag=PHA55_22835
NZ_CP116044.1	Protein Homology	CDS	4670940	4673138	.	+	0	ID=cds-WP_260589858.1;Parent=gene-PHA55_RS22840;Dbxref=Genbank:WP_260589858.1;Name=WP_260589858.1;Ontology_term=GO:0006812,GO:0005215,GO:0005524,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=zntA;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709239.1;locus_tag=PHA55_RS22840;product=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;protein_id=WP_260589858.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4673240	4673485	.	-	.	ID=gene-PHA55_RS22845;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=PHA55_RS22845;old_locus_tag=PHA55_22840
NZ_CP116044.1	Protein Homology	CDS	4673240	4673485	.	-	0	ID=cds-WP_000130621.1;Parent=gene-PHA55_RS22845;Dbxref=Genbank:WP_000130621.1;Name=WP_000130621.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312346.1;locus_tag=PHA55_RS22845;product=sulfurtransferase TusA;protein_id=WP_000130621.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4673706	4674371	.	+	.	ID=gene-PHA55_RS22850;Name=yhhQ;gbkey=Gene;gene=yhhQ;gene_biotype=protein_coding;locus_tag=PHA55_RS22850;old_locus_tag=PHA55_22845
NZ_CP116044.1	Protein Homology	CDS	4673706	4674371	.	+	0	ID=cds-WP_001100467.1;Parent=gene-PHA55_RS22850;Dbxref=Genbank:WP_001100467.1;Name=WP_001100467.1;Ontology_term=GO:1990397;gbkey=CDS;gene=yhhQ;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312347.1;locus_tag=PHA55_RS22850;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_001100467.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4674444	4675001	.	+	.	ID=gene-PHA55_RS22855;Name=dcrB;gbkey=Gene;gene=dcrB;gene_biotype=protein_coding;locus_tag=PHA55_RS22855;old_locus_tag=PHA55_22850
NZ_CP116044.1	Protein Homology	CDS	4674444	4675001	.	+	0	ID=cds-WP_260589859.1;Parent=gene-PHA55_RS22855;Dbxref=Genbank:WP_260589859.1;Name=WP_260589859.1;gbkey=CDS;gene=dcrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417929.4;locus_tag=PHA55_RS22855;product=phage sensitivity protein DcrB;protein_id=WP_260589859.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4675005	4676222	.	-	.	ID=gene-PHA55_RS22860;Name=yhhS;gbkey=Gene;gene=yhhS;gene_biotype=protein_coding;locus_tag=PHA55_RS22860;old_locus_tag=PHA55_22855
NZ_CP116044.1	Protein Homology	CDS	4675005	4676222	.	-	0	ID=cds-WP_001298709.1;Parent=gene-PHA55_RS22860;Dbxref=Genbank:WP_001298709.1;Name=WP_001298709.1;gbkey=CDS;gene=yhhS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417930.2;locus_tag=PHA55_RS22860;product=MFS transporter;protein_id=WP_001298709.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4676354	4677403	.	+	.	ID=gene-PHA55_RS22865;Name=yhhT;gbkey=Gene;gene=yhhT;gene_biotype=protein_coding;locus_tag=PHA55_RS22865;old_locus_tag=PHA55_22860
NZ_CP116044.1	Protein Homology	CDS	4676354	4677403	.	+	0	ID=cds-WP_001297848.1;Parent=gene-PHA55_RS22865;Dbxref=Genbank:WP_001297848.1;Name=WP_001297848.1;gbkey=CDS;gene=yhhT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312350.2;locus_tag=PHA55_RS22865;product=AI-2E family transporter;protein_id=WP_001297848.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4677458	4678045	.	+	.	ID=gene-PHA55_RS22870;Name=acpT;gbkey=Gene;gene=acpT;gene_biotype=protein_coding;locus_tag=PHA55_RS22870;old_locus_tag=PHA55_22865
NZ_CP116044.1	Protein Homology	CDS	4677458	4678045	.	+	0	ID=cds-WP_000285784.1;Parent=gene-PHA55_RS22870;Dbxref=Genbank:WP_000285784.1;Name=WP_000285784.1;gbkey=CDS;gene=acpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312369.1;locus_tag=PHA55_RS22870;product=4'-phosphopantetheinyl transferase AcpT;protein_id=WP_000285784.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4678156	4679730	.	+	.	ID=gene-PHA55_RS22875;Name=nikA;gbkey=Gene;gene=nikA;gene_biotype=protein_coding;locus_tag=PHA55_RS22875;old_locus_tag=PHA55_22870
NZ_CP116044.1	Protein Homology	CDS	4678156	4679730	.	+	0	ID=cds-WP_000953356.1;Parent=gene-PHA55_RS22875;Dbxref=Genbank:WP_000953356.1;Name=WP_000953356.1;Ontology_term=GO:0015675,GO:0015413,GO:0016151,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=nikA;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type nickel transporter activity|0015413||IEA,nickel cation binding|0016151||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709246.1;locus_tag=PHA55_RS22875;product=nickel ABC transporter substrate-binding protein;protein_id=WP_000953356.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4679730	4680674	.	+	.	ID=gene-PHA55_RS22880;Name=nikB;gbkey=Gene;gene=nikB;gene_biotype=protein_coding;locus_tag=PHA55_RS22880;old_locus_tag=PHA55_22875
NZ_CP116044.1	Protein Homology	CDS	4679730	4680674	.	+	0	ID=cds-WP_000947068.1;Parent=gene-PHA55_RS22880;Dbxref=Genbank:WP_000947068.1;Name=WP_000947068.1;gbkey=CDS;gene=nikB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417934.1;locus_tag=PHA55_RS22880;product=nickel ABC transporter permease subunit NikB;protein_id=WP_000947068.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4680671	4681504	.	+	.	ID=gene-PHA55_RS22885;Name=nikC;gbkey=Gene;gene=nikC;gene_biotype=protein_coding;locus_tag=PHA55_RS22885;old_locus_tag=PHA55_22880
NZ_CP116044.1	Protein Homology	CDS	4680671	4681504	.	+	0	ID=cds-WP_042099188.1;Parent=gene-PHA55_RS22885;Dbxref=Genbank:WP_042099188.1;Name=WP_042099188.1;Ontology_term=GO:0055085,GO:0015099,GO:0016020;gbkey=CDS;gene=nikC;go_component=membrane|0016020||IEA;go_function=nickel cation transmembrane transporter activity|0015099||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312372.1;locus_tag=PHA55_RS22885;product=nickel ABC transporter permease subunit NikC;protein_id=WP_042099188.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4681504	4682268	.	+	.	ID=gene-PHA55_RS22890;Name=nikD;gbkey=Gene;gene=nikD;gene_biotype=protein_coding;locus_tag=PHA55_RS22890;old_locus_tag=PHA55_22885
NZ_CP116044.1	Protein Homology	CDS	4681504	4682268	.	+	0	ID=cds-WP_001136236.1;Parent=gene-PHA55_RS22890;Dbxref=Genbank:WP_001136236.1;Name=WP_001136236.1;Ontology_term=GO:0015675,GO:0005524,GO:0015413,GO:0009898,GO:0043190;gbkey=CDS;gene=nikD;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type nickel transporter activity|0015413||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417936.1;locus_tag=PHA55_RS22890;product=nickel import ATP-binding protein NikD;protein_id=WP_001136236.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4682265	4683071	.	+	.	ID=gene-PHA55_RS22895;Name=nikE;gbkey=Gene;gene=nikE;gene_biotype=protein_coding;locus_tag=PHA55_RS22895;old_locus_tag=PHA55_22890
NZ_CP116044.1	Protein Homology	CDS	4682265	4683071	.	+	0	ID=cds-WP_000173666.1;Parent=gene-PHA55_RS22895;Dbxref=Genbank:WP_000173666.1;Name=WP_000173666.1;Ontology_term=GO:0015675,GO:0005524,GO:0015413,GO:0009898,GO:0043190;gbkey=CDS;gene=nikE;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type nickel transporter activity|0015413||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417937.1;locus_tag=PHA55_RS22895;product=nickel import ATP-binding protein NikE;protein_id=WP_000173666.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4683077	4683478	.	+	.	ID=gene-PHA55_RS22900;Name=nikR;gbkey=Gene;gene=nikR;gene_biotype=protein_coding;locus_tag=PHA55_RS22900;old_locus_tag=PHA55_22895
NZ_CP116044.1	Protein Homology	CDS	4683077	4683478	.	+	0	ID=cds-WP_001190062.1;Parent=gene-PHA55_RS22900;Dbxref=Genbank:WP_001190062.1;Name=WP_001190062.1;Ontology_term=GO:0006355,GO:0010045,GO:0003677,GO:0016151;gbkey=CDS;gene=nikR;go_function=DNA binding|0003677||IEA,nickel cation binding|0016151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to nickel cation|0010045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312375.1;locus_tag=PHA55_RS22900;product=nickel-responsive transcriptional regulator NikR;protein_id=WP_001190062.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4683598	4683957	.	-	.	ID=gene-PHA55_RS22905;Name=PHA55_RS22905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS22905;old_locus_tag=PHA55_22900
NZ_CP116044.1	Protein Homology	CDS	4683598	4683957	.	-	0	ID=cds-WP_000593555.1;Parent=gene-PHA55_RS22905;Dbxref=Genbank:WP_000593555.1;Name=WP_000593555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312383.1;locus_tag=PHA55_RS22905;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_000593555.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4683954	4684229	.	-	.	ID=gene-PHA55_RS22910;Name=PHA55_RS22910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS22910;old_locus_tag=PHA55_22905
NZ_CP116044.1	Protein Homology	CDS	4683954	4684229	.	-	0	ID=cds-WP_001259388.1;Parent=gene-PHA55_RS22910;Dbxref=Genbank:WP_001259388.1;Name=WP_001259388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312384.1;locus_tag=PHA55_RS22910;product=type II toxin-antitoxin system HicA family toxin;protein_id=WP_001259388.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4684302	4685426	.	-	.	ID=gene-PHA55_RS22915;Name=yhhJ;gbkey=Gene;gene=yhhJ;gene_biotype=protein_coding;locus_tag=PHA55_RS22915;old_locus_tag=PHA55_22910
NZ_CP116044.1	Protein Homology	CDS	4684302	4685426	.	-	0	ID=cds-WP_001216257.1;Parent=gene-PHA55_RS22915;Dbxref=Genbank:WP_001216257.1;Name=WP_001216257.1;gbkey=CDS;gene=yhhJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709253.2;locus_tag=PHA55_RS22915;product=ABC transporter permease;protein_id=WP_001216257.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4685426	4688161	.	-	.	ID=gene-PHA55_RS22920;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=PHA55_RS22920;old_locus_tag=PHA55_22915
NZ_CP116044.1	Protein Homology	CDS	4685426	4688161	.	-	0	ID=cds-WP_000149124.1;Parent=gene-PHA55_RS22920;Dbxref=Genbank:WP_000149124.1;Name=WP_000149124.1;gbkey=CDS;gene=rbbA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026225.1;locus_tag=PHA55_RS22920;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=WP_000149124.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4688158	4689225	.	-	.	ID=gene-PHA55_RS22925;Name=yhiI;gbkey=Gene;gene=yhiI;gene_biotype=protein_coding;locus_tag=PHA55_RS22925;old_locus_tag=PHA55_22920
NZ_CP116044.1	Protein Homology	CDS	4688158	4689225	.	-	0	ID=cds-WP_000361485.1;Parent=gene-PHA55_RS22925;Dbxref=Genbank:WP_000361485.1;Name=WP_000361485.1;gbkey=CDS;gene=yhiI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312387.1;locus_tag=PHA55_RS22925;product=HlyD family secretion protein;protein_id=WP_000361485.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4689288	4689401	.	-	.	ID=gene-PHA55_RS22930;Name=yhiY;gbkey=Gene;gene=yhiY;gene_biotype=protein_coding;locus_tag=PHA55_RS22930;old_locus_tag=PHA55_22925
NZ_CP116044.1	Protein Homology	CDS	4689288	4689401	.	-	0	ID=cds-WP_001296785.1;Parent=gene-PHA55_RS22930;Dbxref=Genbank:WP_001296785.1;Name=WP_001296785.1;gbkey=CDS;gene=yhiY;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051203.1;locus_tag=PHA55_RS22930;product=protein YhiY;protein_id=WP_001296785.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4689591	4691213	.	-	.	ID=gene-PHA55_RS22935;Name=yhiJ;gbkey=Gene;gene=yhiJ;gene_biotype=protein_coding;locus_tag=PHA55_RS22935;old_locus_tag=PHA55_22930
NZ_CP116044.1	Protein Homology	CDS	4689591	4691213	.	-	0	ID=cds-WP_001307442.1;Parent=gene-PHA55_RS22935;Dbxref=Genbank:WP_001307442.1;Name=WP_001307442.1;gbkey=CDS;gene=yhiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417945.1;locus_tag=PHA55_RS22935;product=DUF4049 domain-containing protein;protein_id=WP_001307442.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4691475	4693064	.	-	.	ID=gene-PHA55_RS22940;Name=PHA55_RS22940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS22940;old_locus_tag=PHA55_22935
NZ_CP116044.1	Protein Homology	CDS	4691475	4693064	.	-	0	ID=cds-WP_000862320.1;Parent=gene-PHA55_RS22940;Dbxref=Genbank:WP_000862320.1;Name=WP_000862320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312389.1;locus_tag=PHA55_RS22940;product=DUF4049 domain-containing protein;protein_id=WP_000862320.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4693448	4694500	.	+	.	ID=gene-PHA55_RS22945;Name=yhiM;gbkey=Gene;gene=yhiM;gene_biotype=protein_coding;locus_tag=PHA55_RS22945;old_locus_tag=PHA55_22940
NZ_CP116044.1	Protein Homology	CDS	4693448	4694500	.	+	0	ID=cds-WP_260589861.1;Parent=gene-PHA55_RS22945;Dbxref=Genbank:WP_260589861.1;Name=WP_260589861.1;gbkey=CDS;gene=yhiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417948.4;locus_tag=PHA55_RS22945;product=DUF2776 domain-containing protein;protein_id=WP_260589861.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4694816	4696018	.	-	.	ID=gene-PHA55_RS22950;Name=yhiN;gbkey=Gene;gene=yhiN;gene_biotype=protein_coding;locus_tag=PHA55_RS22950;old_locus_tag=PHA55_22945
NZ_CP116044.1	Protein Homology	CDS	4694816	4696018	.	-	0	ID=cds-WP_000439180.1;Parent=gene-PHA55_RS22950;Dbxref=Genbank:WP_000439180.1;Name=WP_000439180.1;gbkey=CDS;gene=yhiN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417949.1;locus_tag=PHA55_RS22950;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_000439180.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4696250	4697749	.	+	.	ID=gene-PHA55_RS22955;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=PHA55_RS22955;old_locus_tag=PHA55_22950
NZ_CP116044.1	Protein Homology	CDS	4696250	4697749	.	+	0	ID=cds-WP_000902780.1;Parent=gene-PHA55_RS22955;Dbxref=Genbank:WP_000902780.1;Name=WP_000902780.1;Ontology_term=GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312392.1;locus_tag=PHA55_RS22955;product=inorganic phosphate transporter PitA;protein_id=WP_000902780.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4697820	4698155	.	-	.	ID=gene-PHA55_RS22960;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=PHA55_RS22960;old_locus_tag=PHA55_22955
NZ_CP116044.1	Protein Homology	CDS	4697820	4698155	.	-	0	ID=cds-WP_000626187.1;Parent=gene-PHA55_RS22960;Dbxref=Genbank:WP_000626187.1;Name=WP_000626187.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312393.1;locus_tag=PHA55_RS22960;product=universal stress protein UspB;protein_id=WP_000626187.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4698546	4698980	.	+	.	ID=gene-PHA55_RS22965;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=PHA55_RS22965;old_locus_tag=PHA55_22960
NZ_CP116044.1	Protein Homology	CDS	4698546	4698980	.	+	0	ID=cds-WP_000323571.1;Parent=gene-PHA55_RS22965;Dbxref=Genbank:WP_000323571.1;Name=WP_000323571.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312394.1;locus_tag=PHA55_RS22965;product=universal stress protein UspA;protein_id=WP_000323571.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4699047	4699100	.	-	.	ID=gene-PHA55_RS22970;Name=PHA55_RS22970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS22970;old_locus_tag=PHA55_22965
NZ_CP116044.1	Protein Homology	CDS	4699047	4699100	.	-	0	ID=cds-WP_223375011.1;Parent=gene-PHA55_RS22970;Dbxref=Genbank:WP_223375011.1;Name=WP_223375011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051204.1;locus_tag=PHA55_RS22970;product=hypothetical protein;protein_id=WP_223375011.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4699078	4699131	.	-	.	ID=gene-PHA55_RS22975;Name=PHA55_RS22975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS22975;old_locus_tag=PHA55_22970
NZ_CP116044.1	Protein Homology	CDS	4699078	4699131	.	-	0	ID=cds-WP_212734132.1;Parent=gene-PHA55_RS22975;Dbxref=Genbank:WP_212734132.1;Name=WP_212734132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051205.1;locus_tag=PHA55_RS22975;product=hypothetical protein;protein_id=WP_212734132.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4699297	4700766	.	+	.	ID=gene-PHA55_RS22980;Name=dtpB;gbkey=Gene;gene=dtpB;gene_biotype=protein_coding;locus_tag=PHA55_RS22980;old_locus_tag=PHA55_22975
NZ_CP116044.1	Protein Homology	CDS	4699297	4700766	.	+	0	ID=cds-WP_001098636.1;Parent=gene-PHA55_RS22980;Dbxref=Genbank:WP_001098636.1;Name=WP_001098636.1;gbkey=CDS;gene=dtpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312395.1;locus_tag=PHA55_RS22980;product=dipeptide/tripeptide permease DtpB;protein_id=WP_001098636.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4700815	4701567	.	-	.	ID=gene-PHA55_RS22985;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=PHA55_RS22985;old_locus_tag=PHA55_22980
NZ_CP116044.1	Protein Homology	CDS	4700815	4701567	.	-	0	ID=cds-WP_000686620.1;Parent=gene-PHA55_RS22985;Dbxref=Genbank:WP_000686620.1;Name=WP_000686620.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rsmJ;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312396.1;locus_tag=PHA55_RS22985;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=WP_000686620.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4701575	4703617	.	-	.	ID=gene-PHA55_RS22990;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=PHA55_RS22990;old_locus_tag=PHA55_22985
NZ_CP116044.1	Protein Homology	CDS	4701575	4703617	.	-	0	ID=cds-WP_001298719.1;Parent=gene-PHA55_RS22990;Dbxref=Genbank:WP_001298719.1;Name=WP_001298719.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417955.1;locus_tag=PHA55_RS22990;product=oligopeptidase A;protein_id=WP_001298719.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4703820	4704662	.	+	.	ID=gene-PHA55_RS22995;Name=rlmJ;gbkey=Gene;gene=rlmJ;gene_biotype=protein_coding;locus_tag=PHA55_RS22995;old_locus_tag=PHA55_22990
NZ_CP116044.1	Protein Homology	CDS	4703820	4704662	.	+	0	ID=cds-WP_001308123.1;Parent=gene-PHA55_RS22995;Dbxref=Genbank:WP_001308123.1;Name=WP_001308123.1;gbkey=CDS;gene=rlmJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312398.1;locus_tag=PHA55_RS22995;product=23S rRNA (adenine(2030)-N(6))-methyltransferase;protein_id=WP_001308123.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4704734	4706086	.	+	.	ID=gene-PHA55_RS23000;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=PHA55_RS23000;old_locus_tag=PHA55_22995
NZ_CP116044.1	Protein Homology	CDS	4704734	4706086	.	+	0	ID=cds-WP_000160808.1;Parent=gene-PHA55_RS23000;Dbxref=Genbank:WP_000160808.1;Name=WP_000160808.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=PHA55_RS23000;product=glutathione-disulfide reductase;protein_id=WP_000160808.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4706140	4706223	.	-	.	ID=gene-PHA55_RS23005;Name=dinQ;gbkey=Gene;gene=dinQ;gene_biotype=protein_coding;locus_tag=PHA55_RS23005;old_locus_tag=PHA55_23000
NZ_CP116044.1	Protein Homology	CDS	4706140	4706223	.	-	0	ID=cds-WP_001295215.1;Parent=gene-PHA55_RS23005;Dbxref=Genbank:WP_001295215.1;Name=WP_001295215.1;gbkey=CDS;gene=dinQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165328.2;locus_tag=PHA55_RS23005;product=hypothetical protein;protein_id=WP_001295215.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4706963	4707316	.	+	.	ID=gene-PHA55_RS23010;Name=arsR;gbkey=Gene;gene=arsR;gene_biotype=protein_coding;locus_tag=PHA55_RS23010;old_locus_tag=PHA55_23005
NZ_CP116044.1	Protein Homology	CDS	4706963	4707316	.	+	0	ID=cds-WP_000008957.1;Parent=gene-PHA55_RS23010;Dbxref=Genbank:WP_000008957.1;Name=WP_000008957.1;gbkey=CDS;gene=arsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417958.1;locus_tag=PHA55_RS23010;product=As(III)-sensing metalloregulatory transcriptional repressor ArsR;protein_id=WP_000008957.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4707370	4708659	.	+	.	ID=gene-PHA55_RS23015;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=PHA55_RS23015;old_locus_tag=PHA55_23010
NZ_CP116044.1	Protein Homology	CDS	4707370	4708659	.	+	0	ID=cds-WP_000922639.1;Parent=gene-PHA55_RS23015;Dbxref=Genbank:WP_000922639.1;Name=WP_000922639.1;gbkey=CDS;gene=arsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312401.1;locus_tag=PHA55_RS23015;product=arsenite/antimonite:H(+) antiporter ArsB;protein_id=WP_000922639.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4708672	4709097	.	+	.	ID=gene-PHA55_RS23020;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=PHA55_RS23020;old_locus_tag=PHA55_23015
NZ_CP116044.1	Protein Homology	CDS	4708672	4709097	.	+	0	ID=cds-WP_000065769.1;Parent=gene-PHA55_RS23020;Dbxref=Genbank:WP_000065769.1;Name=WP_000065769.1;Ontology_term=GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417960.1;locus_tag=PHA55_RS23020;product=glutaredoxin-dependent arsenate reductase;protein_id=WP_000065769.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4709220	4709516	.	-	.	ID=gene-PHA55_RS23025;Name=PHA55_RS23025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS23025;old_locus_tag=PHA55_23020
NZ_CP116044.1	Protein Homology	CDS	4709220	4709516	.	-	0	ID=cds-WP_001175589.1;Parent=gene-PHA55_RS23025;Dbxref=Genbank:WP_001175589.1;Name=WP_001175589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465662.1;locus_tag=PHA55_RS23025;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WP_001175589.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4709624	4710625	.	+	.	ID=gene-PHA55_RS23030;Name=PHA55_RS23030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS23030;old_locus_tag=PHA55_23025
NZ_CP116044.1	Protein Homology	CDS	4709624	4710625	.	+	0	ID=cds-WP_000100270.1;Parent=gene-PHA55_RS23030;Dbxref=Genbank:WP_000100270.1;Name=WP_000100270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000100290.1;locus_tag=PHA55_RS23030;product=permease;protein_id=WP_000100270.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4711205	4712428	.	+	.	ID=gene-PHA55_RS23035;Name=PHA55_RS23035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS23035;old_locus_tag=PHA55_23030
NZ_CP116044.1	Protein Homology	CDS	4711205	4712428	.	+	0	ID=cds-WP_033800749.1;Parent=gene-PHA55_RS23035;Dbxref=Genbank:WP_033800749.1;Name=WP_033800749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709288.1;locus_tag=PHA55_RS23035;product=hypothetical protein;protein_id=WP_033800749.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4712675	4713241	.	+	.	ID=gene-PHA55_RS23040;Name=slp;gbkey=Gene;gene=slp;gene_biotype=protein_coding;locus_tag=PHA55_RS23040;old_locus_tag=PHA55_23035
NZ_CP116044.1	Protein Homology	CDS	4712675	4713241	.	+	0	ID=cds-WP_001057453.1;Parent=gene-PHA55_RS23040;Dbxref=Genbank:WP_001057453.1;Name=WP_001057453.1;gbkey=CDS;gene=slp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312404.2;locus_tag=PHA55_RS23040;product=outer membrane lipoprotein Slp;protein_id=WP_001057453.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4713397	4713927	.	+	.	ID=gene-PHA55_RS23045;Name=dctR;gbkey=Gene;gene=dctR;gene_biotype=protein_coding;locus_tag=PHA55_RS23045;old_locus_tag=PHA55_23040
NZ_CP116044.1	Protein Homology	CDS	4713397	4713927	.	+	0	ID=cds-WP_000478619.1;Parent=gene-PHA55_RS23045;Dbxref=Genbank:WP_000478619.1;Name=WP_000478619.1;Ontology_term=GO:0006355;gbkey=CDS;gene=dctR;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417964.1;locus_tag=PHA55_RS23045;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_000478619.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4713969	4714616	.	-	.	ID=gene-PHA55_RS23050;Name=yhiD;gbkey=Gene;gene=yhiD;gene_biotype=protein_coding;locus_tag=PHA55_RS23050;old_locus_tag=PHA55_23045
NZ_CP116044.1	Protein Homology	CDS	4713969	4714616	.	-	0	ID=cds-WP_001296814.1;Parent=gene-PHA55_RS23050;Dbxref=Genbank:WP_001296814.1;Name=WP_001296814.1;gbkey=CDS;gene=yhiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417965.1;locus_tag=PHA55_RS23050;product=MgtC/SapB family protein;protein_id=WP_001296814.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4714680	4715006	.	-	.	ID=gene-PHA55_RS23055;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=PHA55_RS23055;old_locus_tag=PHA55_23050
NZ_CP116044.1	Protein Homology	CDS	4714680	4715006	.	-	0	ID=cds-WP_001298717.1;Parent=gene-PHA55_RS23055;Dbxref=Genbank:WP_001298717.1;Name=WP_001298717.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417966.4;locus_tag=PHA55_RS23055;product=acid-activated periplasmic chaperone HdeB;protein_id=WP_001298717.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4715122	4715454	.	-	.	ID=gene-PHA55_RS23060;Name=hdeA;gbkey=Gene;gene=hdeA;gene_biotype=protein_coding;locus_tag=PHA55_RS23060;old_locus_tag=PHA55_23055
NZ_CP116044.1	Protein Homology	CDS	4715122	4715454	.	-	0	ID=cds-WP_000756550.1;Parent=gene-PHA55_RS23060;Dbxref=Genbank:WP_000756550.1;Name=WP_000756550.1;gbkey=CDS;gene=hdeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312417.1;locus_tag=PHA55_RS23060;product=acid-activated periplasmic chaperone HdeA;protein_id=WP_000756550.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4715709	4716281	.	+	.	ID=gene-PHA55_RS23065;Name=hdeD;gbkey=Gene;gene=hdeD;gene_biotype=protein_coding;locus_tag=PHA55_RS23065;old_locus_tag=PHA55_23060
NZ_CP116044.1	Protein Homology	CDS	4715709	4716281	.	+	0	ID=cds-WP_000965672.1;Parent=gene-PHA55_RS23065;Dbxref=Genbank:WP_000965672.1;Name=WP_000965672.1;gbkey=CDS;gene=hdeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312418.1;locus_tag=PHA55_RS23065;product=acid-resistance protein HdeD;protein_id=WP_000965672.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4717080	4717607	.	+	.	ID=gene-PHA55_RS23070;Name=gadE;gbkey=Gene;gene=gadE;gene_biotype=protein_coding;locus_tag=PHA55_RS23070;old_locus_tag=PHA55_23065
NZ_CP116044.1	Protein Homology	CDS	4717080	4717607	.	+	0	ID=cds-WP_000576690.1;Parent=gene-PHA55_RS23070;Dbxref=Genbank:WP_000576690.1;Name=WP_000576690.1;gbkey=CDS;gene=gadE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312419.1;locus_tag=PHA55_RS23070;product=acid resistance transcriptional activator GadE;protein_id=WP_000576690.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4717608	4717886	.	-	.	ID=gene-PHA55_RS23075;Name=PHA55_RS23075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS23075;old_locus_tag=PHA55_23070
NZ_CP116044.1	Protein Homology	CDS	4717608	4717886	.	-	0	ID=cds-WP_001205329.1;Parent=gene-PHA55_RS23075;Dbxref=Genbank:WP_001205329.1;Name=WP_001205329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502656.1;locus_tag=PHA55_RS23075;product=hypothetical protein;protein_id=WP_001205329.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4717946	4719103	.	+	.	ID=gene-PHA55_RS23080;Name=mdtE;gbkey=Gene;gene=mdtE;gene_biotype=protein_coding;locus_tag=PHA55_RS23080;old_locus_tag=PHA55_23075
NZ_CP116044.1	Protein Homology	CDS	4717946	4719103	.	+	0	ID=cds-WP_001081984.1;Parent=gene-PHA55_RS23080;Dbxref=Genbank:WP_001081984.1;Name=WP_001081984.1;gbkey=CDS;gene=mdtE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417970.1;locus_tag=PHA55_RS23080;product=multidrug transporter subunit MdtE;protein_id=WP_001081984.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4719128	4722241	.	+	.	ID=gene-PHA55_RS23085;Name=mdtF;gbkey=Gene;gene=mdtF;gene_biotype=protein_coding;locus_tag=PHA55_RS23085;old_locus_tag=PHA55_23080
NZ_CP116044.1	Protein Homology	CDS	4719128	4722241	.	+	0	ID=cds-WP_000024892.1;Parent=gene-PHA55_RS23085;Dbxref=Genbank:WP_000024892.1;Name=WP_000024892.1;gbkey=CDS;gene=mdtF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312421.1;locus_tag=PHA55_RS23085;product=multidrug efflux pump RND permease MdtF;protein_id=WP_000024892.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4722604	4723332	.	-	.	ID=gene-PHA55_RS23090;Name=gadW;gbkey=Gene;gene=gadW;gene_biotype=protein_coding;locus_tag=PHA55_RS23090;old_locus_tag=PHA55_23085
NZ_CP116044.1	Protein Homology	CDS	4722604	4723332	.	-	0	ID=cds-WP_000149991.1;Parent=gene-PHA55_RS23090;Dbxref=Genbank:WP_000149991.1;Name=WP_000149991.1;gbkey=CDS;gene=gadW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312422.1;locus_tag=PHA55_RS23090;product=acid resistance transcriptional activator GadW;protein_id=WP_000149991.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4723700	4724524	.	-	.	ID=gene-PHA55_RS23095;Name=gadX;gbkey=Gene;gene=gadX;gene_biotype=protein_coding;locus_tag=PHA55_RS23095;old_locus_tag=PHA55_23090
NZ_CP116044.1	Protein Homology	CDS	4723700	4724524	.	-	0	ID=cds-WP_001191068.1;Parent=gene-PHA55_RS23095;Dbxref=Genbank:WP_001191068.1;Name=WP_001191068.1;gbkey=CDS;gene=gadX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709339.1;locus_tag=PHA55_RS23095;product=acid resistance transcriptional activator GadX;protein_id=WP_001191068.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4724894	4726294	.	-	.	ID=gene-PHA55_RS23100;Name=gadA;gbkey=Gene;gene=gadA;gene_biotype=protein_coding;locus_tag=PHA55_RS23100;old_locus_tag=PHA55_23095
NZ_CP116044.1	Protein Homology	CDS	4724894	4726294	.	-	0	ID=cds-WP_000372240.1;Parent=gene-PHA55_RS23100;Dbxref=Genbank:WP_000372240.1;Name=WP_000372240.1;Ontology_term=GO:0006540,GO:0004351;gbkey=CDS;gene=gadA;go_function=glutamate decarboxylase activity|0004351||IEA;go_process=glutamate decarboxylation to succinate|0006540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417974.1;locus_tag=PHA55_RS23100;product=glutamate decarboxylase;protein_id=WP_000372240.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4726505	4727902	.	-	.	ID=gene-PHA55_RS23105;Name=ccp;gbkey=Gene;gene=ccp;gene_biotype=protein_coding;locus_tag=PHA55_RS23105;old_locus_tag=PHA55_23100
NZ_CP116044.1	Protein Homology	CDS	4726505	4727902	.	-	0	ID=cds-WP_000784821.1;Parent=gene-PHA55_RS23105;Dbxref=Genbank:WP_000784821.1;Name=WP_000784821.1;gbkey=CDS;gene=ccp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312425.1;locus_tag=PHA55_RS23105;product=cytochrome c peroxidase;protein_id=WP_000784821.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4728307	4729956	.	+	.	ID=gene-PHA55_RS23110;Name=treF;gbkey=Gene;gene=treF;gene_biotype=protein_coding;locus_tag=PHA55_RS23110;old_locus_tag=PHA55_23105
NZ_CP116044.1	Protein Homology	CDS	4728307	4729956	.	+	0	ID=cds-WP_000934218.1;Parent=gene-PHA55_RS23110;Dbxref=Genbank:WP_000934218.1;Name=WP_000934218.1;gbkey=CDS;gene=treF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709297.1;locus_tag=PHA55_RS23110;product=alpha%2Calpha-trehalase;protein_id=WP_000934218.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4730007	4730609	.	-	.	ID=gene-PHA55_RS23115;Name=yhjB;gbkey=Gene;gene=yhjB;gene_biotype=protein_coding;locus_tag=PHA55_RS23115;old_locus_tag=PHA55_23110
NZ_CP116044.1	Protein Homology	CDS	4730007	4730609	.	-	0	ID=cds-WP_001167678.1;Parent=gene-PHA55_RS23115;Dbxref=Genbank:WP_001167678.1;Name=WP_001167678.1;gbkey=CDS;gene=yhjB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417977.1;locus_tag=PHA55_RS23115;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_001167678.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4731129	4732028	.	+	.	ID=gene-PHA55_RS23120;Name=rcdB;gbkey=Gene;gene=rcdB;gene_biotype=protein_coding;locus_tag=PHA55_RS23120;old_locus_tag=PHA55_23115
NZ_CP116044.1	Protein Homology	CDS	4731129	4732028	.	+	0	ID=cds-WP_260589862.1;Parent=gene-PHA55_RS23120;Dbxref=Genbank:WP_260589862.1;Name=WP_260589862.1;gbkey=CDS;gene=rcdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417978.2;locus_tag=PHA55_RS23120;product=LysR family transcriptional regulator;protein_id=WP_260589862.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4732077	4733090	.	+	.	ID=gene-PHA55_RS23125;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=PHA55_RS23125;old_locus_tag=PHA55_23120
NZ_CP116044.1	Protein Homology	CDS	4732077	4733090	.	+	0	ID=cds-WP_000191257.1;Parent=gene-PHA55_RS23125;Dbxref=Genbank:WP_000191257.1;Name=WP_000191257.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312429.1;locus_tag=PHA55_RS23125;product=inner membrane protein YhjD;protein_id=WP_000191257.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4733501	4734823	.	+	.	ID=gene-PHA55_RS23130;Name=yhjE;gbkey=Gene;gene=yhjE;gene_biotype=protein_coding;locus_tag=PHA55_RS23130;old_locus_tag=PHA55_23125
NZ_CP116044.1	Protein Homology	CDS	4733501	4734823	.	+	0	ID=cds-WP_001149003.1;Parent=gene-PHA55_RS23130;Dbxref=Genbank:WP_001149003.1;Name=WP_001149003.1;gbkey=CDS;gene=yhjE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417980.1;locus_tag=PHA55_RS23130;product=MFS transporter;protein_id=WP_001149003.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4735057	4737117	.	-	.	ID=gene-PHA55_RS23135;Name=yhjG;gbkey=Gene;gene=yhjG;gene_biotype=protein_coding;locus_tag=PHA55_RS23135;old_locus_tag=PHA55_23130
NZ_CP116044.1	Protein Homology	CDS	4735057	4737117	.	-	0	ID=cds-WP_001296794.1;Parent=gene-PHA55_RS23135;Dbxref=Genbank:WP_001296794.1;Name=WP_001296794.1;gbkey=CDS;gene=yhjG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417981.2;locus_tag=PHA55_RS23135;product=AsmA family protein;protein_id=WP_001296794.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4737187	4737954	.	-	.	ID=gene-PHA55_RS23140;Name=pdeH;gbkey=Gene;gene=pdeH;gene_biotype=protein_coding;locus_tag=PHA55_RS23140;old_locus_tag=PHA55_23135
NZ_CP116044.1	Protein Homology	CDS	4737187	4737954	.	-	0	ID=cds-WP_001295219.1;Parent=gene-PHA55_RS23140;Dbxref=Genbank:WP_001295219.1;Name=WP_001295219.1;gbkey=CDS;gene=pdeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417982.2;locus_tag=PHA55_RS23140;product=cyclic-guanylate-specific phosphodiesterase;protein_id=WP_001295219.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4738186	4739115	.	+	.	ID=gene-PHA55_RS23145;Name=kdgK;gbkey=Gene;gene=kdgK;gene_biotype=protein_coding;locus_tag=PHA55_RS23145;old_locus_tag=PHA55_23140
NZ_CP116044.1	Protein Homology	CDS	4738186	4739115	.	+	0	ID=cds-WP_001296796.1;Parent=gene-PHA55_RS23145;Dbxref=Genbank:WP_001296796.1;Name=WP_001296796.1;gbkey=CDS;gene=kdgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417983.2;locus_tag=PHA55_RS23145;product=2-dehydro-3-deoxygluconokinase;protein_id=WP_001296796.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4739211	4740707	.	-	.	ID=gene-PHA55_RS23150;Name=yhjJ;gbkey=Gene;gene=yhjJ;gene_biotype=protein_coding;locus_tag=PHA55_RS23150;old_locus_tag=PHA55_23145
NZ_CP116044.1	Protein Homology	CDS	4739211	4740707	.	-	0	ID=cds-WP_001163149.1;Parent=gene-PHA55_RS23150;Dbxref=Genbank:WP_001163149.1;Name=WP_001163149.1;gbkey=CDS;gene=yhjJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312434.1;locus_tag=PHA55_RS23150;product=pitrilysin family protein;protein_id=WP_001163149.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4740928	4742214	.	-	.	ID=gene-PHA55_RS23155;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=PHA55_RS23155;old_locus_tag=PHA55_23150
NZ_CP116044.1	Protein Homology	CDS	4740928	4742214	.	-	0	ID=cds-WP_000858214.1;Parent=gene-PHA55_RS23155;Dbxref=Genbank:WP_000858214.1;Name=WP_000858214.1;gbkey=CDS;gene=dctA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417985.1;locus_tag=PHA55_RS23155;product=C4-dicarboxylate transporter DctC;protein_id=WP_000858214.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4742397	4744385	.	-	.	ID=gene-PHA55_RS23160;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=PHA55_RS23160;old_locus_tag=PHA55_23155
NZ_CP116044.1	Protein Homology	CDS	4742397	4744385	.	-	0	ID=cds-WP_001266306.1;Parent=gene-PHA55_RS23160;Dbxref=Genbank:WP_001266306.1;Name=WP_001266306.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417986.4;locus_tag=PHA55_RS23160;product=biofilm formation regulator HmsP;protein_id=WP_001266306.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4744467	4747940	.	-	.	ID=gene-PHA55_RS23165;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=protein_coding;locus_tag=PHA55_RS23165;old_locus_tag=PHA55_23160
NZ_CP116044.1	Protein Homology	CDS	4744467	4747940	.	-	0	ID=cds-WP_001225144.1;Parent=gene-PHA55_RS23165;Dbxref=Genbank:WP_001225144.1;Name=WP_001225144.1;Ontology_term=GO:0030244,GO:0005515,GO:0019867;gbkey=CDS;gene=bcsC;go_component=outer membrane|0019867||IEA;go_function=protein binding|0005515||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026226.4;locus_tag=PHA55_RS23165;product=cellulose synthase complex outer membrane protein BcsC;protein_id=WP_001225144.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4747922	4749028	.	-	.	ID=gene-PHA55_RS23170;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=PHA55_RS23170;old_locus_tag=PHA55_23165
NZ_CP116044.1	Protein Homology	CDS	4747922	4749028	.	-	0	ID=cds-WP_001307453.1;Parent=gene-PHA55_RS23170;Dbxref=Genbank:WP_001307453.1;Name=WP_001307453.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312438.1;locus_tag=PHA55_RS23170;product=cellulose synthase complex periplasmic endoglucanase BcsZ;protein_id=WP_001307453.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4749035	4751374	.	-	.	ID=gene-PHA55_RS23175;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=PHA55_RS23175;old_locus_tag=PHA55_23170
NZ_CP116044.1	Protein Homology	CDS	4749035	4751374	.	-	0	ID=cds-WP_001324588.1;Parent=gene-PHA55_RS23175;Dbxref=Genbank:WP_001324588.1;Name=WP_001324588.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417989.1;locus_tag=PHA55_RS23175;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_001324588.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4751385	4754003	.	-	.	ID=gene-PHA55_RS23180;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=PHA55_RS23180;old_locus_tag=PHA55_23175
NZ_CP116044.1	Protein Homology	CDS	4751385	4754003	.	-	0	ID=cds-WP_000025914.1;Parent=gene-PHA55_RS23180;Dbxref=Genbank:WP_000025914.1;Name=WP_000025914.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417990.4;locus_tag=PHA55_RS23180;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_000025914.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4754000	4754752	.	-	.	ID=gene-PHA55_RS23185;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=protein_coding;locus_tag=PHA55_RS23185;old_locus_tag=PHA55_23180
NZ_CP116044.1	Protein Homology	CDS	4754000	4754752	.	-	0	ID=cds-WP_000279528.1;Parent=gene-PHA55_RS23185;Dbxref=Genbank:WP_000279528.1;Name=WP_000279528.1;gbkey=CDS;gene=bcsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709309.1;locus_tag=PHA55_RS23185;product=cellulose biosynthesis protein BcsQ;protein_id=WP_000279528.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4754764	4754952	.	-	.	ID=gene-PHA55_RS23190;Name=bcsR;gbkey=Gene;gene=bcsR;gene_biotype=protein_coding;locus_tag=PHA55_RS23190;old_locus_tag=PHA55_23185
NZ_CP116044.1	Protein Homology	CDS	4754764	4754952	.	-	0	ID=cds-WP_001063318.1;Parent=gene-PHA55_RS23190;Dbxref=Genbank:WP_001063318.1;Name=WP_001063318.1;gbkey=CDS;gene=bcsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417992.1;locus_tag=PHA55_RS23190;product=cellulose biosynthesis protein BcsR;protein_id=WP_001063318.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4755225	4756796	.	+	.	ID=gene-PHA55_RS23195;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=PHA55_RS23195;old_locus_tag=PHA55_23190
NZ_CP116044.1	Protein Homology	CDS	4755225	4756796	.	+	0	ID=cds-WP_001204906.1;Parent=gene-PHA55_RS23195;Dbxref=Genbank:WP_001204906.1;Name=WP_001204906.1;Ontology_term=GO:0035438;gbkey=CDS;gene=bcsE;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417993.1;locus_tag=PHA55_RS23195;product=cellulose biosynthesis c-di-GMP-binding protein BcsE;protein_id=WP_001204906.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4756793	4756984	.	+	.	ID=gene-PHA55_RS23200;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=PHA55_RS23200;old_locus_tag=PHA55_23195
NZ_CP116044.1	Protein Homology	CDS	4756793	4756984	.	+	0	ID=cds-WP_000988308.1;Parent=gene-PHA55_RS23200;Dbxref=Genbank:WP_000988308.1;Name=WP_000988308.1;Ontology_term=GO:0052324,GO:0003674,GO:0005575;gbkey=CDS;gene=bcsF;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=plant-type cell wall cellulose biosynthetic process|0052324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417994.2;locus_tag=PHA55_RS23200;product=cellulose biosynthesis protein BcsF;protein_id=WP_000988308.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4756981	4758660	.	+	.	ID=gene-PHA55_RS23205;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=PHA55_RS23205;old_locus_tag=PHA55_23200
NZ_CP116044.1	Protein Homology	CDS	4756981	4758660	.	+	0	ID=cds-WP_000191596.1;Parent=gene-PHA55_RS23205;Dbxref=Genbank:WP_000191596.1;Name=WP_000191596.1;Ontology_term=GO:0030244,GO:0003674,GO:0005575;gbkey=CDS;gene=bcsG;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312445.1;locus_tag=PHA55_RS23205;product=cellulose biosynthesis protein BcsG;protein_id=WP_000191596.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4758747	4758854	.	-	.	ID=gene-PHA55_RS23210;Name=PHA55_RS23210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS23210;old_locus_tag=PHA55_23205
NZ_CP116044.1	Protein Homology	CDS	4758747	4758854	.	-	0	ID=cds-WP_001295224.1;Parent=gene-PHA55_RS23210;Dbxref=Genbank:WP_001295224.1;Name=WP_001295224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1;locus_tag=PHA55_RS23210;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_001295224.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4759230	4759337	.	-	.	ID=gene-PHA55_RS23215;Name=PHA55_RS23215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS23215;old_locus_tag=PHA55_23210
NZ_CP116044.1	Protein Homology	CDS	4759230	4759337	.	-	0	ID=cds-WP_001295224.1-2;Parent=gene-PHA55_RS23215;Dbxref=Genbank:WP_001295224.1;Name=WP_001295224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1;locus_tag=PHA55_RS23215;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_001295224.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4759712	4759819	.	-	.	ID=gene-PHA55_RS23220;Name=PHA55_RS23220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS23220;old_locus_tag=PHA55_23215
NZ_CP116044.1	Protein Homology	CDS	4759712	4759819	.	-	0	ID=cds-WP_001295224.1-3;Parent=gene-PHA55_RS23220;Dbxref=Genbank:WP_001295224.1;Name=WP_001295224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1;locus_tag=PHA55_RS23220;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_001295224.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4760295	4761566	.	+	.	ID=gene-PHA55_RS23225;Name=yhjV;gbkey=Gene;gene=yhjV;gene_biotype=protein_coding;locus_tag=PHA55_RS23225;old_locus_tag=PHA55_23220
NZ_CP116044.1	Protein Homology	CDS	4760295	4761566	.	+	0	ID=cds-WP_001307456.1;Parent=gene-PHA55_RS23225;Dbxref=Genbank:WP_001307456.1;Name=WP_001307456.1;gbkey=CDS;gene=yhjV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312446.1;locus_tag=PHA55_RS23225;product=aromatic amino acid transport family protein;protein_id=WP_001307456.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4761596	4762600	.	-	.	ID=gene-PHA55_RS23230;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=PHA55_RS23230;old_locus_tag=PHA55_23225
NZ_CP116044.1	Protein Homology	CDS	4761596	4762600	.	-	0	ID=cds-WP_000107035.1;Parent=gene-PHA55_RS23230;Dbxref=Genbank:WP_000107035.1;Name=WP_000107035.1;gbkey=CDS;gene=dppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312447.1;locus_tag=PHA55_RS23230;product=dipeptide ABC transporter ATP-binding subunit DppF;protein_id=WP_000107035.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4762597	4763580	.	-	.	ID=gene-PHA55_RS23235;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=PHA55_RS23235;old_locus_tag=PHA55_23230
NZ_CP116044.1	Protein Homology	CDS	4762597	4763580	.	-	0	ID=cds-WP_001196496.1;Parent=gene-PHA55_RS23235;Dbxref=Genbank:WP_001196496.1;Name=WP_001196496.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312448.1;locus_tag=PHA55_RS23235;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_001196496.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4763591	4764493	.	-	.	ID=gene-PHA55_RS23240;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=PHA55_RS23240;old_locus_tag=PHA55_23235
NZ_CP116044.1	Protein Homology	CDS	4763591	4764493	.	-	0	ID=cds-WP_000084677.1;Parent=gene-PHA55_RS23240;Dbxref=Genbank:WP_000084677.1;Name=WP_000084677.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=PHA55_RS23240;product=dipeptide ABC transporter permease DppC;protein_id=WP_000084677.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4764503	4765522	.	-	.	ID=gene-PHA55_RS23245;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=PHA55_RS23245;old_locus_tag=PHA55_23240
NZ_CP116044.1	Protein Homology	CDS	4764503	4765522	.	-	0	ID=cds-WP_057107163.1;Parent=gene-PHA55_RS23245;Dbxref=Genbank:WP_057107163.1;Name=WP_057107163.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=PHA55_RS23245;product=dipeptide ABC transporter permease DppB;protein_id=WP_057107163.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4765673	4767280	.	-	.	ID=gene-PHA55_RS23250;Name=dppA;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;locus_tag=PHA55_RS23250;old_locus_tag=PHA55_23245
NZ_CP116044.1	Protein Homology	CDS	4765673	4767280	.	-	0	ID=cds-WP_001222883.1;Parent=gene-PHA55_RS23250;Dbxref=Genbank:WP_001222883.1;Name=WP_001222883.1;gbkey=CDS;gene=dppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418001.1;locus_tag=PHA55_RS23250;product=dipeptide ABC transporter substrate-binding protein DppA;protein_id=WP_001222883.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4768025	4768158	.	-	.	ID=gene-PHA55_RS23255;Name=PHA55_RS23255;gbkey=Gene;gene_biotype=ncRNA;locus_tag=PHA55_RS23255;old_locus_tag=PHA55_23250
NZ_CP116044.1	cmsearch	ncRNA	4768025	4768158	.	-	.	ID=rna-PHA55_RS23255;Parent=gene-PHA55_RS23255;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS23255;product=RtT sRNA
NZ_CP116044.1	cmsearch	exon	4768025	4768158	.	-	.	ID=exon-PHA55_RS23255-1;Parent=rna-PHA55_RS23255;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PHA55_RS23255;product=RtT sRNA
NZ_CP116044.1	RefSeq	gene	4768193	4768269	.	-	.	ID=gene-PHA55_RS23260;Name=PHA55_RS23260;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS23260;old_locus_tag=PHA55_23255
NZ_CP116044.1	tRNAscan-SE	tRNA	4768193	4768269	.	-	.	ID=rna-PHA55_RS23260;Parent=gene-PHA55_RS23260;anticodon=(pos:complement(4768233..4768235));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS23260;product=tRNA-Pro
NZ_CP116044.1	tRNAscan-SE	exon	4768193	4768269	.	-	.	ID=exon-PHA55_RS23260-1;Parent=rna-PHA55_RS23260;anticodon=(pos:complement(4768233..4768235));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS23260;product=tRNA-Pro
NZ_CP116044.1	RefSeq	gene	4768361	4770052	.	-	.	ID=gene-PHA55_RS23265;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=PHA55_RS23265;old_locus_tag=PHA55_23260
NZ_CP116044.1	Protein Homology	CDS	4768361	4770052	.	-	0	ID=cds-WP_001269224.1;Parent=gene-PHA55_RS23265;Dbxref=Genbank:WP_001269224.1;Name=WP_001269224.1;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418002.2;locus_tag=PHA55_RS23265;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=WP_001269224.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4770305	4770829	.	-	.	ID=gene-PHA55_RS23270;Name=lpfE;gbkey=Gene;gene=lpfE;gene_biotype=protein_coding;locus_tag=PHA55_RS23270;old_locus_tag=PHA55_23265
NZ_CP116044.1	Protein Homology	CDS	4770305	4770829	.	-	0	ID=cds-WP_000831422.1;Parent=gene-PHA55_RS23270;Dbxref=Genbank:WP_000831422.1;Name=WP_000831422.1;gbkey=CDS;gene=lpfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000831418.1;locus_tag=PHA55_RS23270;product=long polar fimbrial protein LpfE;protein_id=WP_000831422.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4770835	4771890	.	-	.	ID=gene-PHA55_RS23275;Name=lpfD;gbkey=Gene;gene=lpfD;gene_biotype=protein_coding;locus_tag=PHA55_RS23275;old_locus_tag=PHA55_23270
NZ_CP116044.1	Protein Homology	CDS	4770835	4771890	.	-	0	ID=cds-WP_000694926.1;Parent=gene-PHA55_RS23275;Dbxref=Genbank:WP_000694926.1;Name=WP_000694926.1;gbkey=CDS;gene=lpfD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694923.1;locus_tag=PHA55_RS23275;product=long polar fimbrial protein LpfD;protein_id=WP_000694926.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4771901	4774432	.	-	.	ID=gene-PHA55_RS23280;Name=lpfC;gbkey=Gene;gene=lpfC;gene_biotype=protein_coding;locus_tag=PHA55_RS23280;old_locus_tag=PHA55_23275
NZ_CP116044.1	Protein Homology	CDS	4771901	4774432	.	-	0	ID=cds-WP_000558680.1;Parent=gene-PHA55_RS23280;Dbxref=Genbank:WP_000558680.1;Name=WP_000558680.1;gbkey=CDS;gene=lpfC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001759518.1;locus_tag=PHA55_RS23280;product=outer membrane usher protein LpfC;protein_id=WP_000558680.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4774456	4775142	.	-	.	ID=gene-PHA55_RS23285;Name=lpfB;gbkey=Gene;gene=lpfB;gene_biotype=protein_coding;locus_tag=PHA55_RS23285;old_locus_tag=PHA55_23280
NZ_CP116044.1	Protein Homology	CDS	4774456	4775142	.	-	0	ID=cds-WP_057107161.1;Parent=gene-PHA55_RS23285;Dbxref=Genbank:WP_057107161.1;Name=WP_057107161.1;gbkey=CDS;gene=lpfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000822474.1;locus_tag=PHA55_RS23285;product=long polar fimbrial biogenesis chaperone LpfB;protein_id=WP_057107161.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4775226	4775750	.	-	.	ID=gene-PHA55_RS23290;Name=PHA55_RS23290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS23290;old_locus_tag=PHA55_23285
NZ_CP116044.1	Protein Homology	CDS	4775226	4775750	.	-	0	ID=cds-WP_000756356.1;Parent=gene-PHA55_RS23290;Dbxref=Genbank:WP_000756356.1;Name=WP_000756356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000756357.1;locus_tag=PHA55_RS23290;product=long polar fimbria major subunit LpfA;protein_id=WP_000756356.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4776074	4777276	.	-	.	ID=gene-PHA55_RS23295;Name=yhjX;gbkey=Gene;gene=yhjX;gene_biotype=protein_coding;locus_tag=PHA55_RS23295;old_locus_tag=PHA55_23290
NZ_CP116044.1	Protein Homology	CDS	4776074	4777276	.	-	0	ID=cds-WP_000189038.1;Parent=gene-PHA55_RS23295;Dbxref=Genbank:WP_000189038.1;Name=WP_000189038.1;gbkey=CDS;gene=yhjX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312459.1;locus_tag=PHA55_RS23295;product=MFS transporter;protein_id=WP_000189038.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4777505	4778203	.	-	.	ID=gene-PHA55_RS23300;Name=yhjY;gbkey=Gene;gene=yhjY;gene_biotype=protein_coding;locus_tag=PHA55_RS23300;old_locus_tag=PHA55_23295
NZ_CP116044.1	Protein Homology	CDS	4777505	4778203	.	-	0	ID=cds-WP_001296791.1;Parent=gene-PHA55_RS23300;Dbxref=Genbank:WP_001296791.1;Name=WP_001296791.1;gbkey=CDS;gene=yhjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709326.2;locus_tag=PHA55_RS23300;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_001296791.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4778361	4778924	.	+	.	ID=gene-PHA55_RS23305;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=PHA55_RS23305;old_locus_tag=PHA55_23300
NZ_CP116044.1	Protein Homology	CDS	4778361	4778924	.	+	0	ID=cds-WP_000438953.1;Parent=gene-PHA55_RS23305;Dbxref=Genbank:WP_000438953.1;Name=WP_000438953.1;gbkey=CDS;gene=tag;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418005.1;locus_tag=PHA55_RS23305;product=DNA-3-methyladenine glycosylase I;protein_id=WP_000438953.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4778921	4779361	.	+	.	ID=gene-PHA55_RS23310;Name=yiaC;gbkey=Gene;gene=yiaC;gene_biotype=protein_coding;locus_tag=PHA55_RS23310;old_locus_tag=PHA55_23305
NZ_CP116044.1	Protein Homology	CDS	4778921	4779361	.	+	0	ID=cds-WP_000617478.1;Parent=gene-PHA55_RS23310;Dbxref=Genbank:WP_000617478.1;Name=WP_000617478.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yiaC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709328.1;locus_tag=PHA55_RS23310;product=N-acetyltransferase;protein_id=WP_000617478.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4779330	4781663	.	-	.	ID=gene-PHA55_RS23315;Name=bisC;gbkey=Gene;gene=bisC;gene_biotype=protein_coding;locus_tag=PHA55_RS23315;old_locus_tag=PHA55_23310
NZ_CP116044.1	Protein Homology	CDS	4779330	4781663	.	-	0	ID=cds-WP_071885006.1;Parent=gene-PHA55_RS23315;Dbxref=Genbank:WP_071885006.1;Name=WP_071885006.1;gbkey=CDS;gene=bisC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418007.3;locus_tag=PHA55_RS23315;product=biotin sulfoxide reductase;protein_id=WP_071885006.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4781816	4782475	.	+	.	ID=gene-PHA55_RS23320;Name=yiaD;gbkey=Gene;gene=yiaD;gene_biotype=protein_coding;locus_tag=PHA55_RS23320;old_locus_tag=PHA55_23315
NZ_CP116044.1	Protein Homology	CDS	4781816	4782475	.	+	0	ID=cds-WP_000747625.1;Parent=gene-PHA55_RS23320;Dbxref=Genbank:WP_000747625.1;Name=WP_000747625.1;Ontology_term=GO:0009279;gbkey=CDS;gene=yiaD;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312464.1;locus_tag=PHA55_RS23320;product=OmpA family lipoprotein;protein_id=WP_000747625.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4782579	4783553	.	+	.	ID=gene-PHA55_RS23325;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=PHA55_RS23325;old_locus_tag=PHA55_23320
NZ_CP116044.1	Protein Homology	CDS	4782579	4783553	.	+	0	ID=cds-WP_000805027.1;Parent=gene-PHA55_RS23325;Dbxref=Genbank:WP_000805027.1;Name=WP_000805027.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312465.2;locus_tag=PHA55_RS23325;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WP_000805027.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4783603	4784313	.	-	.	ID=gene-PHA55_RS23330;Name=yiaF;gbkey=Gene;gene=yiaF;gene_biotype=protein_coding;locus_tag=PHA55_RS23330;old_locus_tag=PHA55_23325
NZ_CP116044.1	Protein Homology	CDS	4783603	4784313	.	-	0	ID=cds-WP_000190517.1;Parent=gene-PHA55_RS23330;Dbxref=Genbank:WP_000190517.1;Name=WP_000190517.1;gbkey=CDS;gene=yiaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418010.2;locus_tag=PHA55_RS23330;product=DUF3053 domain-containing protein;protein_id=WP_000190517.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4784747	4785037	.	+	.	ID=gene-PHA55_RS23335;Name=yiaG;gbkey=Gene;gene=yiaG;gene_biotype=protein_coding;locus_tag=PHA55_RS23335;old_locus_tag=PHA55_23330
NZ_CP116044.1	Protein Homology	CDS	4784747	4785037	.	+	0	ID=cds-WP_000455798.1;Parent=gene-PHA55_RS23335;Dbxref=Genbank:WP_000455798.1;Name=WP_000455798.1;gbkey=CDS;gene=yiaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312467.1;locus_tag=PHA55_RS23335;product=HTH-type transcriptional regulator;protein_id=WP_000455798.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4785318	4785530	.	+	.	ID=gene-PHA55_RS23340;Name=cspA;gbkey=Gene;gene=cspA;gene_biotype=protein_coding;locus_tag=PHA55_RS23340;old_locus_tag=PHA55_23335
NZ_CP116044.1	Protein Homology	CDS	4785318	4785530	.	+	0	ID=cds-WP_000014594.1;Parent=gene-PHA55_RS23340;Dbxref=Genbank:WP_000014594.1;Name=WP_000014594.1;gbkey=CDS;gene=cspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=PHA55_RS23340;product=RNA chaperone/antiterminator CspA;protein_id=WP_000014594.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4785670	4785729	.	+	.	ID=gene-PHA55_RS23345;Name=PHA55_RS23345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS23345;old_locus_tag=PHA55_23340
NZ_CP116044.1	Protein Homology	CDS	4785670	4785729	.	+	0	ID=cds-WP_212591412.1;Parent=gene-PHA55_RS23345;Dbxref=Genbank:WP_212591412.1;Name=WP_212591412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051206.1;locus_tag=PHA55_RS23345;product=hypothetical protein;protein_id=WP_212591412.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4785718	4785870	.	-	.	ID=gene-PHA55_RS23350;Name=hokA;gbkey=Gene;gene=hokA;gene_biotype=protein_coding;locus_tag=PHA55_RS23350;old_locus_tag=PHA55_23345
NZ_CP116044.1	Protein Homology	CDS	4785718	4785870	.	-	0	ID=cds-WP_001135738.1;Parent=gene-PHA55_RS23350;Dbxref=Genbank:WP_001135738.1;Name=WP_001135738.1;gbkey=CDS;gene=hokA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540334.1;locus_tag=PHA55_RS23350;product=type I toxin-antitoxin system toxin HokA;protein_id=WP_001135738.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4786196	4788265	.	-	.	ID=gene-PHA55_RS23355;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=PHA55_RS23355;old_locus_tag=PHA55_23350
NZ_CP116044.1	Protein Homology	CDS	4786196	4788265	.	-	0	ID=cds-WP_001291771.1;Parent=gene-PHA55_RS23355;Dbxref=Genbank:WP_001291771.1;Name=WP_001291771.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyS;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=PHA55_RS23355;product=glycine--tRNA ligase subunit beta;protein_id=WP_001291771.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4788275	4789186	.	-	.	ID=gene-PHA55_RS23360;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=PHA55_RS23360;old_locus_tag=PHA55_23355
NZ_CP116044.1	Protein Homology	CDS	4788275	4789186	.	-	0	ID=cds-WP_001168544.1;Parent=gene-PHA55_RS23360;Dbxref=Genbank:WP_001168544.1;Name=WP_001168544.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyQ;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312470.1;locus_tag=PHA55_RS23360;product=glycine--tRNA ligase subunit alpha;protein_id=WP_001168544.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4789281	4789580	.	-	.	ID=gene-PHA55_RS23365;Name=ysaB;gbkey=Gene;gene=ysaB;gene_biotype=protein_coding;locus_tag=PHA55_RS23365;old_locus_tag=PHA55_23360
NZ_CP116044.1	Protein Homology	CDS	4789281	4789580	.	-	0	ID=cds-WP_000980104.1;Parent=gene-PHA55_RS23365;Dbxref=Genbank:WP_000980104.1;Name=WP_000980104.1;gbkey=CDS;gene=ysaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709347.1;locus_tag=PHA55_RS23365;product=YsaB family lipoprotein;protein_id=WP_000980104.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4789755	4790750	.	+	.	ID=gene-PHA55_RS23370;Name=wecH;gbkey=Gene;gene=wecH;gene_biotype=protein_coding;locus_tag=PHA55_RS23370;old_locus_tag=PHA55_23365
NZ_CP116044.1	Protein Homology	CDS	4789755	4790750	.	+	0	ID=cds-WP_001182653.1;Parent=gene-PHA55_RS23370;Dbxref=Genbank:WP_001182653.1;Name=WP_001182653.1;gbkey=CDS;gene=wecH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709348.1;locus_tag=PHA55_RS23370;product=O-acetyltransferase WecH;protein_id=WP_001182653.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	4790792	4791240	.	-	.	ID=gene-PHA55_RS23375;Name=yiaA;gbkey=Gene;gene=yiaA;gene_biotype=pseudogene;locus_tag=PHA55_RS23375;old_locus_tag=PHA55_23370;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	4790792	4791240	.	-	0	ID=cds-PHA55_RS23375;Parent=gene-PHA55_RS23375;Note=frameshifted;gbkey=CDS;gene=yiaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312472.2;locus_tag=PHA55_RS23375;product=inner membrane protein YiaA;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	4791286	4791627	.	-	.	ID=gene-PHA55_RS23380;Name=yiaB;gbkey=Gene;gene=yiaB;gene_biotype=protein_coding;locus_tag=PHA55_RS23380;old_locus_tag=PHA55_23375
NZ_CP116044.1	Protein Homology	CDS	4791286	4791627	.	-	0	ID=cds-WP_000858193.1;Parent=gene-PHA55_RS23380;Dbxref=Genbank:WP_000858193.1;Name=WP_000858193.1;gbkey=CDS;gene=yiaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709350.2;locus_tag=PHA55_RS23380;product=inner membrane protein YiaB;protein_id=WP_000858193.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4791796	4793250	.	-	.	ID=gene-PHA55_RS23385;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=PHA55_RS23385;old_locus_tag=PHA55_23380
NZ_CP116044.1	Protein Homology	CDS	4791796	4793250	.	-	0	ID=cds-WP_000275386.1;Parent=gene-PHA55_RS23385;Dbxref=Genbank:WP_000275386.1;Name=WP_000275386.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709351.1;locus_tag=PHA55_RS23385;product=xylulokinase;protein_id=WP_000275386.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4793322	4794644	.	-	.	ID=gene-PHA55_RS23390;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=PHA55_RS23390;old_locus_tag=PHA55_23385
NZ_CP116044.1	Protein Homology	CDS	4793322	4794644	.	-	0	ID=cds-WP_001149592.1;Parent=gene-PHA55_RS23390;Dbxref=Genbank:WP_001149592.1;Name=WP_001149592.1;Ontology_term=GO:0006098,GO:0042732,GO:0000287,GO:0009045;gbkey=CDS;gene=xylA;go_function=magnesium ion binding|0000287||IEA,xylose isomerase activity|0009045||IEA;go_process=pentose-phosphate shunt|0006098||IEA,D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312475.1;locus_tag=PHA55_RS23390;product=xylose isomerase;protein_id=WP_001149592.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4795010	4796002	.	+	.	ID=gene-PHA55_RS23395;Name=xylF;gbkey=Gene;gene=xylF;gene_biotype=protein_coding;locus_tag=PHA55_RS23395;old_locus_tag=PHA55_23390
NZ_CP116044.1	Protein Homology	CDS	4795010	4796002	.	+	0	ID=cds-WP_001296518.1;Parent=gene-PHA55_RS23395;Dbxref=Genbank:WP_001296518.1;Name=WP_001296518.1;Ontology_term=GO:0015753;gbkey=CDS;gene=xylF;go_process=D-xylose transmembrane transport|0015753||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418023.1;locus_tag=PHA55_RS23395;product=D-xylose ABC transporter substrate-binding protein;protein_id=WP_001296518.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4796080	4797621	.	+	.	ID=gene-PHA55_RS23400;Name=xylG;gbkey=Gene;gene=xylG;gene_biotype=protein_coding;locus_tag=PHA55_RS23400;old_locus_tag=PHA55_23395
NZ_CP116044.1	Protein Homology	CDS	4796080	4797621	.	+	0	ID=cds-WP_001146482.1;Parent=gene-PHA55_RS23400;Dbxref=Genbank:WP_001146482.1;Name=WP_001146482.1;Ontology_term=GO:0015753,GO:0005524,GO:0015614,GO:0009898,GO:0055052;gbkey=CDS;gene=xylG;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-xylose transporter activity|0015614||IEA;go_process=D-xylose transmembrane transport|0015753||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312477.1;locus_tag=PHA55_RS23400;product=D-xylose ABC transporter ATP-binding protein;protein_id=WP_001146482.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4797599	4798780	.	+	.	ID=gene-PHA55_RS23405;Name=xylH;gbkey=Gene;gene=xylH;gene_biotype=protein_coding;locus_tag=PHA55_RS23405;old_locus_tag=PHA55_23400
NZ_CP116044.1	Protein Homology	CDS	4797599	4798780	.	+	0	ID=cds-WP_000045978.1;Parent=gene-PHA55_RS23405;Dbxref=Genbank:WP_000045978.1;Name=WP_000045978.1;gbkey=CDS;gene=xylH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312478.1;locus_tag=PHA55_RS23405;product=xylose ABC transporter permease XylH;protein_id=WP_000045978.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4798858	4800036	.	+	.	ID=gene-PHA55_RS23410;Name=xylR;gbkey=Gene;gene=xylR;gene_biotype=protein_coding;locus_tag=PHA55_RS23410;old_locus_tag=PHA55_23405
NZ_CP116044.1	Protein Homology	CDS	4798858	4800036	.	+	0	ID=cds-WP_000494484.1;Parent=gene-PHA55_RS23410;Dbxref=Genbank:WP_000494484.1;Name=WP_000494484.1;gbkey=CDS;gene=xylR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312479.1;locus_tag=PHA55_RS23410;product=DNA-binding transcriptional regulator XylR;protein_id=WP_000494484.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4800144	4800968	.	-	.	ID=gene-PHA55_RS23415;Name=bax;gbkey=Gene;gene=bax;gene_biotype=protein_coding;locus_tag=PHA55_RS23415;old_locus_tag=PHA55_23410
NZ_CP116044.1	Protein Homology	CDS	4800144	4800968	.	-	0	ID=cds-WP_001297957.1;Parent=gene-PHA55_RS23415;Dbxref=Genbank:WP_001297957.1;Name=WP_001297957.1;gbkey=CDS;gene=bax;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026230.1;locus_tag=PHA55_RS23415;product=protein bax;protein_id=WP_001297957.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4801288	4803318	.	+	.	ID=gene-PHA55_RS23420;Name=malS;gbkey=Gene;gene=malS;gene_biotype=protein_coding;locus_tag=PHA55_RS23420;old_locus_tag=PHA55_23415
NZ_CP116044.1	Protein Homology	CDS	4801288	4803318	.	+	0	ID=cds-WP_000761259.1;Parent=gene-PHA55_RS23420;Dbxref=Genbank:WP_000761259.1;Name=WP_000761259.1;Ontology_term=GO:0004556;gbkey=CDS;gene=malS;go_function=alpha-amylase activity|0004556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312481.1;locus_tag=PHA55_RS23420;product=alpha-amylase;protein_id=WP_000761259.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4803496	4804749	.	+	.	ID=gene-PHA55_RS23425;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=PHA55_RS23425;old_locus_tag=PHA55_23420
NZ_CP116044.1	Protein Homology	CDS	4803496	4804749	.	+	0	ID=cds-WP_000144344.1;Parent=gene-PHA55_RS23425;Dbxref=Genbank:WP_000144344.1;Name=WP_000144344.1;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312482.1;locus_tag=PHA55_RS23425;product=valine--pyruvate transaminase;protein_id=WP_000144344.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4804901	4805374	.	-	.	ID=gene-PHA55_RS23430;Name=ysaA;gbkey=Gene;gene=ysaA;gene_biotype=protein_coding;locus_tag=PHA55_RS23430;old_locus_tag=PHA55_23425
NZ_CP116044.1	Protein Homology	CDS	4804901	4805374	.	-	0	ID=cds-WP_001315901.1;Parent=gene-PHA55_RS23430;Dbxref=Genbank:WP_001315901.1;Name=WP_001315901.1;gbkey=CDS;gene=ysaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312483.1;locus_tag=PHA55_RS23430;product=4Fe-4S binding protein;protein_id=WP_001315901.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4805476	4806324	.	-	.	ID=gene-PHA55_RS23435;Name=yiaJ;gbkey=Gene;gene=yiaJ;gene_biotype=protein_coding;locus_tag=PHA55_RS23435;old_locus_tag=PHA55_23430
NZ_CP116044.1	Protein Homology	CDS	4805476	4806324	.	-	0	ID=cds-WP_000514233.1;Parent=gene-PHA55_RS23435;Dbxref=Genbank:WP_000514233.1;Name=WP_000514233.1;gbkey=CDS;gene=yiaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418031.1;locus_tag=PHA55_RS23435;product=IclR family transcriptional regulator YiaJ;protein_id=WP_000514233.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4806526	4807524	.	+	.	ID=gene-PHA55_RS23440;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=protein_coding;locus_tag=PHA55_RS23440;old_locus_tag=PHA55_23435
NZ_CP116044.1	Protein Homology	CDS	4806526	4807524	.	+	0	ID=cds-WP_000869039.1;Parent=gene-PHA55_RS23440;Dbxref=Genbank:WP_000869039.1;Name=WP_000869039.1;Ontology_term=GO:0047559,GO:0070403;gbkey=CDS;gene=yiaK;go_function=3-dehydro-L-gulonate 2-dehydrogenase activity|0047559||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709360.1;locus_tag=PHA55_RS23440;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=WP_000869039.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4807536	4808003	.	+	.	ID=gene-PHA55_RS23445;Name=yiaL;gbkey=Gene;gene=yiaL;gene_biotype=protein_coding;locus_tag=PHA55_RS23445;old_locus_tag=PHA55_23440
NZ_CP116044.1	Protein Homology	CDS	4807536	4808003	.	+	0	ID=cds-WP_000576096.1;Parent=gene-PHA55_RS23445;Dbxref=Genbank:WP_000576096.1;Name=WP_000576096.1;gbkey=CDS;gene=yiaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418033.1;locus_tag=PHA55_RS23445;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000576096.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4808121	4808594	.	+	.	ID=gene-PHA55_RS23450;Name=yiaM;gbkey=Gene;gene=yiaM;gene_biotype=protein_coding;locus_tag=PHA55_RS23450;old_locus_tag=PHA55_23445
NZ_CP116044.1	Protein Homology	CDS	4808121	4808594	.	+	0	ID=cds-WP_000721664.1;Parent=gene-PHA55_RS23450;Dbxref=Genbank:WP_000721664.1;Name=WP_000721664.1;gbkey=CDS;gene=yiaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418034.1;locus_tag=PHA55_RS23450;product=2%2C3-diketo-L-gulonate TRAP transporter small permease YiaM;protein_id=WP_000721664.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4808597	4809874	.	+	.	ID=gene-PHA55_RS23455;Name=yiaN;gbkey=Gene;gene=yiaN;gene_biotype=protein_coding;locus_tag=PHA55_RS23455;old_locus_tag=PHA55_23450
NZ_CP116044.1	Protein Homology	CDS	4808597	4809874	.	+	0	ID=cds-WP_000279599.1;Parent=gene-PHA55_RS23455;Dbxref=Genbank:WP_000279599.1;Name=WP_000279599.1;gbkey=CDS;gene=yiaN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026232.1;locus_tag=PHA55_RS23455;product=2%2C3-diketo-L-gulonate transporter large permease YiaN;protein_id=WP_000279599.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4809887	4810873	.	+	.	ID=gene-PHA55_RS23460;Name=yiaO;gbkey=Gene;gene=yiaO;gene_biotype=protein_coding;locus_tag=PHA55_RS23460;old_locus_tag=PHA55_23455
NZ_CP116044.1	Protein Homology	CDS	4809887	4810873	.	+	0	ID=cds-WP_000776894.1;Parent=gene-PHA55_RS23460;Dbxref=Genbank:WP_000776894.1;Name=WP_000776894.1;gbkey=CDS;gene=yiaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418036.1;locus_tag=PHA55_RS23460;product=2%2C3-diketo-L-gulonate transporter substrate-binding protein YiaO;protein_id=WP_000776894.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4810877	4812373	.	+	.	ID=gene-PHA55_RS23465;Name=lyxK;gbkey=Gene;gene=lyxK;gene_biotype=protein_coding;locus_tag=PHA55_RS23465;old_locus_tag=PHA55_23460
NZ_CP116044.1	Protein Homology	CDS	4810877	4812373	.	+	0	ID=cds-WP_000196082.1;Parent=gene-PHA55_RS23465;Dbxref=Genbank:WP_000196082.1;Name=WP_000196082.1;gbkey=CDS;gene=lyxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418037.1;locus_tag=PHA55_RS23465;product=L-xylulokinase;protein_id=WP_000196082.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4812370	4813032	.	+	.	ID=gene-PHA55_RS23470;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=PHA55_RS23470;old_locus_tag=PHA55_23465
NZ_CP116044.1	Protein Homology	CDS	4812370	4813032	.	+	0	ID=cds-WP_000089497.1;Parent=gene-PHA55_RS23470;Dbxref=Genbank:WP_000089497.1;Name=WP_000089497.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418038.1;locus_tag=PHA55_RS23470;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000089497.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4813025	4813885	.	+	.	ID=gene-PHA55_RS23475;Name=sgbU;gbkey=Gene;gene=sgbU;gene_biotype=protein_coding;locus_tag=PHA55_RS23475;old_locus_tag=PHA55_23470
NZ_CP116044.1	Protein Homology	CDS	4813025	4813885	.	+	0	ID=cds-WP_001296811.1;Parent=gene-PHA55_RS23475;Dbxref=Genbank:WP_001296811.1;Name=WP_001296811.1;gbkey=CDS;gene=sgbU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418039.2;locus_tag=PHA55_RS23475;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_001296811.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4813879	4814574	.	+	.	ID=gene-PHA55_RS23480;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=PHA55_RS23480;old_locus_tag=PHA55_23475
NZ_CP116044.1	Protein Homology	CDS	4813879	4814574	.	+	0	ID=cds-WP_000893142.1;Parent=gene-PHA55_RS23480;Dbxref=Genbank:WP_000893142.1;Name=WP_000893142.1;Ontology_term=GO:0019568,GO:0008742;gbkey=CDS;gene=araD;go_function=L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418040.1;locus_tag=PHA55_RS23480;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000893142.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4814606	4815421	.	-	.	ID=gene-PHA55_RS23485;Name=PHA55_RS23485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS23485;old_locus_tag=PHA55_23480
NZ_CP116044.1	Protein Homology	CDS	4814606	4815421	.	-	0	ID=cds-WP_000891841.1;Parent=gene-PHA55_RS23485;Dbxref=Genbank:WP_000891841.1;Name=WP_000891841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312484.1;locus_tag=PHA55_RS23485;product=AraC family transcriptional regulator;protein_id=WP_000891841.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4815647	4817047	.	+	.	ID=gene-PHA55_RS23490;Name=PHA55_RS23490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS23490;old_locus_tag=PHA55_23485
NZ_CP116044.1	Protein Homology	CDS	4815647	4817047	.	+	0	ID=cds-WP_000204833.1;Parent=gene-PHA55_RS23490;Dbxref=Genbank:WP_000204833.1;Name=WP_000204833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312485.1;locus_tag=PHA55_RS23490;product=MFS transporter;protein_id=WP_000204833.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4817058	4819028	.	+	.	ID=gene-PHA55_RS23495;Name=PHA55_RS23495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS23495;old_locus_tag=PHA55_23490
NZ_CP116044.1	Protein Homology	CDS	4817058	4819028	.	+	0	ID=cds-WP_001026893.1;Parent=gene-PHA55_RS23495;Dbxref=Genbank:WP_001026893.1;Name=WP_001026893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312486.1;locus_tag=PHA55_RS23495;product=glycoside hydrolase family 127 protein;protein_id=WP_001026893.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4819158	4819898	.	-	.	ID=gene-PHA55_RS23500;Name=yiaT;gbkey=Gene;gene=yiaT;gene_biotype=protein_coding;locus_tag=PHA55_RS23500;old_locus_tag=PHA55_23495
NZ_CP116044.1	Protein Homology	CDS	4819158	4819898	.	-	0	ID=cds-WP_000906806.1;Parent=gene-PHA55_RS23500;Dbxref=Genbank:WP_000906806.1;Name=WP_000906806.1;gbkey=CDS;gene=yiaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312487.1;locus_tag=PHA55_RS23500;product=MipA/OmpV family protein;protein_id=WP_000906806.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4820022	4820996	.	+	.	ID=gene-PHA55_RS23505;Name=yiaU;gbkey=Gene;gene=yiaU;gene_biotype=protein_coding;locus_tag=PHA55_RS23505;old_locus_tag=PHA55_23500
NZ_CP116044.1	Protein Homology	CDS	4820022	4820996	.	+	0	ID=cds-WP_000164036.1;Parent=gene-PHA55_RS23505;Dbxref=Genbank:WP_000164036.1;Name=WP_000164036.1;gbkey=CDS;gene=yiaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418042.1;locus_tag=PHA55_RS23505;product=LysR family transcriptional regulator;protein_id=WP_000164036.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4820993	4822129	.	-	.	ID=gene-PHA55_RS23510;Name=yiaV;gbkey=Gene;gene=yiaV;gene_biotype=protein_coding;locus_tag=PHA55_RS23510;old_locus_tag=PHA55_23505
NZ_CP116044.1	Protein Homology	CDS	4820993	4822129	.	-	0	ID=cds-WP_000364884.1;Parent=gene-PHA55_RS23510;Dbxref=Genbank:WP_000364884.1;Name=WP_000364884.1;gbkey=CDS;gene=yiaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418043.1;locus_tag=PHA55_RS23510;product=HlyD family secretion protein;protein_id=WP_000364884.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4822135	4822458	.	-	.	ID=gene-PHA55_RS23515;Name=yiaW;gbkey=Gene;gene=yiaW;gene_biotype=protein_coding;locus_tag=PHA55_RS23515;old_locus_tag=PHA55_23510
NZ_CP116044.1	Protein Homology	CDS	4822135	4822458	.	-	0	ID=cds-WP_000478193.1;Parent=gene-PHA55_RS23515;Dbxref=Genbank:WP_000478193.1;Name=WP_000478193.1;gbkey=CDS;gene=yiaW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312490.1;locus_tag=PHA55_RS23515;product=DUF3302 domain-containing protein;protein_id=WP_000478193.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4822641	4822784	.	+	.	ID=gene-PHA55_RS23520;Name=PHA55_RS23520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS23520;old_locus_tag=PHA55_23515
NZ_CP116044.1	GeneMarkS-2+	CDS	4822641	4822784	.	+	0	ID=cds-WP_001066080.1;Parent=gene-PHA55_RS23520;Dbxref=Genbank:WP_001066080.1;Name=WP_001066080.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA55_RS23520;product=hypothetical protein;protein_id=WP_001066080.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4823003	4824541	.	-	.	ID=gene-PHA55_RS23525;Name=aldB;gbkey=Gene;gene=aldB;gene_biotype=protein_coding;locus_tag=PHA55_RS23525;old_locus_tag=PHA55_23520
NZ_CP116044.1	Protein Homology	CDS	4823003	4824541	.	-	0	ID=cds-WP_000183978.1;Parent=gene-PHA55_RS23525;Dbxref=Genbank:WP_000183978.1;Name=WP_000183978.1;gbkey=CDS;gene=aldB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551836.1;locus_tag=PHA55_RS23525;product=aldehyde dehydrogenase AldB;protein_id=WP_000183978.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4824706	4825857	.	-	.	ID=gene-PHA55_RS23530;Name=yiaY;gbkey=Gene;gene=yiaY;gene_biotype=protein_coding;locus_tag=PHA55_RS23530;old_locus_tag=PHA55_23525
NZ_CP116044.1	Protein Homology	CDS	4824706	4825857	.	-	0	ID=cds-WP_000168712.1;Parent=gene-PHA55_RS23530;Dbxref=Genbank:WP_000168712.1;Name=WP_000168712.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yiaY;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312493.1;locus_tag=PHA55_RS23530;product=L-threonine dehydrogenase;protein_id=WP_000168712.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4826047	4827891	.	-	.	ID=gene-PHA55_RS23535;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=PHA55_RS23535;old_locus_tag=PHA55_23530
NZ_CP116044.1	Protein Homology	CDS	4826047	4827891	.	-	0	ID=cds-WP_000582487.1;Parent=gene-PHA55_RS23535;Dbxref=Genbank:WP_000582487.1;Name=WP_000582487.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525;gbkey=CDS;gene=selB;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418047.1;locus_tag=PHA55_RS23535;product=selenocysteine-specific translation elongation factor;protein_id=WP_000582487.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4827888	4829279	.	-	.	ID=gene-PHA55_RS23540;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=PHA55_RS23540;old_locus_tag=PHA55_23535
NZ_CP116044.1	Protein Homology	CDS	4827888	4829279	.	-	0	ID=cds-WP_000206275.1;Parent=gene-PHA55_RS23540;Dbxref=Genbank:WP_000206275.1;Name=WP_000206275.1;Ontology_term=GO:0016260,GO:0004125;gbkey=CDS;gene=selA;go_function=L-seryl-tRNASec selenium transferase activity|0004125||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312495.1;locus_tag=PHA55_RS23540;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_000206275.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4829377	4829985	.	-	.	ID=gene-PHA55_RS23545;Name=yibF;gbkey=Gene;gene=yibF;gene_biotype=protein_coding;locus_tag=PHA55_RS23545;old_locus_tag=PHA55_23540
NZ_CP116044.1	Protein Homology	CDS	4829377	4829985	.	-	0	ID=cds-WP_000779792.1;Parent=gene-PHA55_RS23545;Dbxref=Genbank:WP_000779792.1;Name=WP_000779792.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yibF;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418049.1;locus_tag=PHA55_RS23545;product=glutathione S-transferase;protein_id=WP_000779792.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4830214	4834449	.	+	.	ID=gene-PHA55_RS23550;Name=rhsB;gbkey=Gene;gene=rhsB;gene_biotype=protein_coding;locus_tag=PHA55_RS23550;old_locus_tag=PHA55_23545
NZ_CP116044.1	Protein Homology	CDS	4830214	4834449	.	+	0	ID=cds-WP_271287478.1;Parent=gene-PHA55_RS23550;Dbxref=Genbank:WP_271287478.1;Name=WP_271287478.1;gbkey=CDS;gene=rhsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026224.1;locus_tag=PHA55_RS23550;product=rhs element protein RhsB;protein_id=WP_271287478.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4834421	4834804	.	+	.	ID=gene-PHA55_RS23555;Name=yhhH;gbkey=Gene;gene=yhhH;gene_biotype=protein_coding;locus_tag=PHA55_RS23555;old_locus_tag=PHA55_23550
NZ_CP116044.1	Protein Homology	CDS	4834421	4834804	.	+	0	ID=cds-WP_001271686.1;Parent=gene-PHA55_RS23555;Dbxref=Genbank:WP_001271686.1;Name=WP_001271686.1;Note=This BlastRule distinguishes YhhH from its paralog YbbC. Both are named for founding members from Escherichia coli K-12%2C and belong Pfam family PF15631.;gbkey=CDS;gene=yhhH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417940.2;locus_tag=PHA55_RS23555;product=protein YhhH;protein_id=WP_001271686.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4834909	4835751	.	+	.	ID=gene-PHA55_RS23560;Name=yibA;gbkey=Gene;gene=yibA;gene_biotype=protein_coding;locus_tag=PHA55_RS23560;old_locus_tag=PHA55_23555
NZ_CP116044.1	Protein Homology	CDS	4834909	4835751	.	+	0	ID=cds-WP_000072850.1;Parent=gene-PHA55_RS23560;Dbxref=Genbank:WP_000072850.1;Name=WP_000072850.1;gbkey=CDS;gene=yibA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418051.1;locus_tag=PHA55_RS23560;product=HEAT repeat domain-containing protein;protein_id=WP_000072850.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	4835779	4836737	.	+	.	ID=gene-PHA55_RS23565;Name=PHA55_RS23565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS23565;old_locus_tag=PHA55_23560;partial=true;pseudo=true;start_range=.,4835779
NZ_CP116044.1	Protein Homology	CDS	4835779	4836737	.	+	0	ID=cds-PHA55_RS23565;Parent=gene-PHA55_RS23565;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312497.1;locus_tag=PHA55_RS23565;partial=true;product=RHS domain-containing protein;pseudo=true;start_range=.,4835779;transl_table=11
NZ_CP116044.1	RefSeq	gene	4836749	4837210	.	+	.	ID=gene-PHA55_RS23570;Name=yibG;gbkey=Gene;gene=yibG;gene_biotype=protein_coding;locus_tag=PHA55_RS23570;old_locus_tag=PHA55_23565
NZ_CP116044.1	Protein Homology	CDS	4836749	4837210	.	+	0	ID=cds-WP_000642489.1;Parent=gene-PHA55_RS23570;Dbxref=Genbank:WP_000642489.1;Name=WP_000642489.1;gbkey=CDS;gene=yibG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418053.1;locus_tag=PHA55_RS23570;product=sel1 repeat family protein;protein_id=WP_000642489.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4837845	4838354	.	+	.	ID=gene-PHA55_RS23575;Name=PHA55_RS23575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS23575;old_locus_tag=PHA55_23570
NZ_CP116044.1	Protein Homology	CDS	4837845	4838354	.	+	0	ID=cds-WP_236917825.1;Parent=gene-PHA55_RS23575;Dbxref=Genbank:WP_236917825.1;Name=WP_236917825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016158939.1;locus_tag=PHA55_RS23575;product=Imm57 family immunity protein;protein_id=WP_236917825.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4838814	4839950	.	-	.	ID=gene-PHA55_RS23580;Name=yibH;gbkey=Gene;gene=yibH;gene_biotype=protein_coding;locus_tag=PHA55_RS23580;old_locus_tag=PHA55_23575
NZ_CP116044.1	Protein Homology	CDS	4838814	4839950	.	-	0	ID=cds-WP_000364939.1;Parent=gene-PHA55_RS23580;Dbxref=Genbank:WP_000364939.1;Name=WP_000364939.1;gbkey=CDS;gene=yibH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312500.1;locus_tag=PHA55_RS23580;product=HlyD family secretion protein;protein_id=WP_000364939.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4839953	4840315	.	-	.	ID=gene-PHA55_RS23585;Name=yibI;gbkey=Gene;gene=yibI;gene_biotype=protein_coding;locus_tag=PHA55_RS23585;old_locus_tag=PHA55_23580
NZ_CP116044.1	Protein Homology	CDS	4839953	4840315	.	-	0	ID=cds-WP_000479624.1;Parent=gene-PHA55_RS23585;Dbxref=Genbank:WP_000479624.1;Name=WP_000479624.1;gbkey=CDS;gene=yibI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418055.1;locus_tag=PHA55_RS23585;product=DUF3302 domain-containing protein;protein_id=WP_000479624.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4840852	4842765	.	+	.	ID=gene-PHA55_RS23590;Name=mtlA;gbkey=Gene;gene=mtlA;gene_biotype=protein_coding;locus_tag=PHA55_RS23590;old_locus_tag=PHA55_23585
NZ_CP116044.1	Protein Homology	CDS	4840852	4842765	.	+	0	ID=cds-WP_000093247.1;Parent=gene-PHA55_RS23590;Dbxref=Genbank:WP_000093247.1;Name=WP_000093247.1;gbkey=CDS;gene=mtlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418056.1;locus_tag=PHA55_RS23590;product=PTS mannitol transporter subunit IICBA;protein_id=WP_000093247.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4842860	4844008	.	+	.	ID=gene-PHA55_RS23595;Name=mtlD;gbkey=Gene;gene=mtlD;gene_biotype=protein_coding;locus_tag=PHA55_RS23595;old_locus_tag=PHA55_23590
NZ_CP116044.1	Protein Homology	CDS	4842860	4844008	.	+	0	ID=cds-WP_000645405.1;Parent=gene-PHA55_RS23595;Dbxref=Genbank:WP_000645405.1;Name=WP_000645405.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;gene=mtlD;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312503.1;locus_tag=PHA55_RS23595;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_000645405.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4844008	4844595	.	+	.	ID=gene-PHA55_RS23600;Name=mtlR;gbkey=Gene;gene=mtlR;gene_biotype=protein_coding;locus_tag=PHA55_RS23600;old_locus_tag=PHA55_23595
NZ_CP116044.1	Protein Homology	CDS	4844008	4844595	.	+	0	ID=cds-WP_000228271.1;Parent=gene-PHA55_RS23600;Dbxref=Genbank:WP_000228271.1;Name=WP_000228271.1;gbkey=CDS;gene=mtlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312504.1;locus_tag=PHA55_RS23600;product=mannitol operon repressor MtlR;protein_id=WP_000228271.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4844607	4844816	.	-	.	ID=gene-PHA55_RS23605;Name=yibT;gbkey=Gene;gene=yibT;gene_biotype=protein_coding;locus_tag=PHA55_RS23605;old_locus_tag=PHA55_23600
NZ_CP116044.1	Protein Homology	CDS	4844607	4844816	.	-	0	ID=cds-WP_000517100.1;Parent=gene-PHA55_RS23605;Dbxref=Genbank:WP_000517100.1;Name=WP_000517100.1;gbkey=CDS;gene=yibT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588470.1;locus_tag=PHA55_RS23605;product=protein YibT;protein_id=WP_000517100.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4845101	4845463	.	+	.	ID=gene-PHA55_RS23610;Name=yibL;gbkey=Gene;gene=yibL;gene_biotype=protein_coding;locus_tag=PHA55_RS23610;old_locus_tag=PHA55_23605
NZ_CP116044.1	Protein Homology	CDS	4845101	4845463	.	+	0	ID=cds-WP_000665680.1;Parent=gene-PHA55_RS23610;Dbxref=Genbank:WP_000665680.1;Name=WP_000665680.1;gbkey=CDS;gene=yibL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312505.1;locus_tag=PHA55_RS23610;product=YibL family ribosome-associated protein;protein_id=WP_000665680.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4846007	4846690	.	+	.	ID=gene-PHA55_RS23615;Name=PHA55_RS23615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS23615;old_locus_tag=PHA55_23610
NZ_CP116044.1	Protein Homology	CDS	4846007	4846690	.	+	0	ID=cds-WP_001049544.1;Parent=gene-PHA55_RS23615;Dbxref=Genbank:WP_001049544.1;Name=WP_001049544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001049551.1;locus_tag=PHA55_RS23615;product=DUF3251 domain-containing protein;protein_id=WP_001049544.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	4846734	4851585	.	+	.	ID=gene-PHA55_RS23620;Name=ehaG;gbkey=Gene;gene=ehaG;gene_biotype=pseudogene;locus_tag=PHA55_RS23620;old_locus_tag=PHA55_23615;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	4846734	4851585	.	+	0	ID=cds-PHA55_RS23620;Parent=gene-PHA55_RS23620;Note=frameshifted;gbkey=CDS;gene=ehaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312507.1;locus_tag=PHA55_RS23620;product=trimeric autotransporter adhesin EhaG;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	4851954	4853609	.	+	.	ID=gene-PHA55_RS23625;Name=lldP;gbkey=Gene;gene=lldP;gene_biotype=protein_coding;locus_tag=PHA55_RS23625;old_locus_tag=PHA55_23620
NZ_CP116044.1	Protein Homology	CDS	4851954	4853609	.	+	0	ID=cds-WP_001297977.1;Parent=gene-PHA55_RS23625;Dbxref=Genbank:WP_001297977.1;Name=WP_001297977.1;Ontology_term=GO:0015727,GO:0015129,GO:0005886;gbkey=CDS;gene=lldP;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312508.1;locus_tag=PHA55_RS23625;product=L-lactate permease;protein_id=WP_001297977.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4853609	4854385	.	+	.	ID=gene-PHA55_RS23630;Name=lldR;gbkey=Gene;gene=lldR;gene_biotype=protein_coding;locus_tag=PHA55_RS23630;old_locus_tag=PHA55_23625
NZ_CP116044.1	Protein Homology	CDS	4853609	4854385	.	+	0	ID=cds-WP_271287479.1;Parent=gene-PHA55_RS23630;Dbxref=Genbank:WP_271287479.1;Name=WP_271287479.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lldR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418061.1;locus_tag=PHA55_RS23630;product=transcriptional regulator LldR;protein_id=WP_271287479.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4854382	4855572	.	+	.	ID=gene-PHA55_RS23635;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=PHA55_RS23635;old_locus_tag=PHA55_23630
NZ_CP116044.1	Protein Homology	CDS	4854382	4855572	.	+	0	ID=cds-WP_000586964.1;Parent=gene-PHA55_RS23635;Dbxref=Genbank:WP_000586964.1;Name=WP_000586964.1;gbkey=CDS;gene=lldD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312510.1;locus_tag=PHA55_RS23635;product=quinone-dependent L-lactate dehydrogenase;protein_id=WP_000586964.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4855758	4856231	.	+	.	ID=gene-PHA55_RS23640;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=PHA55_RS23640;old_locus_tag=PHA55_23635
NZ_CP116044.1	Protein Homology	CDS	4855758	4856231	.	+	0	ID=cds-WP_000932342.1;Parent=gene-PHA55_RS23640;Dbxref=Genbank:WP_000932342.1;Name=WP_000932342.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312511.1;locus_tag=PHA55_RS23640;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_000932342.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4856284	4857105	.	-	.	ID=gene-PHA55_RS23645;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=PHA55_RS23645;old_locus_tag=PHA55_23640
NZ_CP116044.1	Protein Homology	CDS	4856284	4857105	.	-	0	ID=cds-WP_001277561.1;Parent=gene-PHA55_RS23645;Dbxref=Genbank:WP_001277561.1;Name=WP_001277561.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=PHA55_RS23645;product=serine O-acetyltransferase;protein_id=WP_001277561.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4857185	4858204	.	-	.	ID=gene-PHA55_RS23650;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=PHA55_RS23650;old_locus_tag=PHA55_23645
NZ_CP116044.1	Protein Homology	CDS	4857185	4858204	.	-	0	ID=cds-WP_001076194.1;Parent=gene-PHA55_RS23650;Dbxref=Genbank:WP_001076194.1;Name=WP_001076194.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312513.1;locus_tag=PHA55_RS23650;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_001076194.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4858204	4858671	.	-	.	ID=gene-PHA55_RS23655;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=PHA55_RS23655;old_locus_tag=PHA55_23650
NZ_CP116044.1	Protein Homology	CDS	4858204	4858671	.	-	0	ID=cds-WP_000003382.1;Parent=gene-PHA55_RS23655;Dbxref=Genbank:WP_000003382.1;Name=WP_000003382.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369180.1;locus_tag=PHA55_RS23655;product=protein-export chaperone SecB;protein_id=WP_000003382.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4858734	4858985	.	-	.	ID=gene-PHA55_RS23660;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=PHA55_RS23660;old_locus_tag=PHA55_23655
NZ_CP116044.1	Protein Homology	CDS	4858734	4858985	.	-	0	ID=cds-WP_000024392.1;Parent=gene-PHA55_RS23660;Dbxref=Genbank:WP_000024392.1;Name=WP_000024392.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312515.1;locus_tag=PHA55_RS23660;product=glutaredoxin 3;protein_id=WP_000024392.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4859126	4859557	.	-	.	ID=gene-PHA55_RS23665;Name=yibN;gbkey=Gene;gene=yibN;gene_biotype=protein_coding;locus_tag=PHA55_RS23665;old_locus_tag=PHA55_23660
NZ_CP116044.1	Protein Homology	CDS	4859126	4859557	.	-	0	ID=cds-WP_001315904.1;Parent=gene-PHA55_RS23665;Dbxref=Genbank:WP_001315904.1;Name=WP_001315904.1;gbkey=CDS;gene=yibN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312516.1;locus_tag=PHA55_RS23665;product=rhodanese-like domain-containing protein;protein_id=WP_001315904.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4859802	4861346	.	+	.	ID=gene-PHA55_RS23670;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=PHA55_RS23670;old_locus_tag=PHA55_23665
NZ_CP116044.1	Protein Homology	CDS	4859802	4861346	.	+	0	ID=cds-WP_001352773.1;Parent=gene-PHA55_RS23670;Dbxref=Genbank:WP_001352773.1;Name=WP_001352773.1;Ontology_term=GO:0006007,GO:0004619;gbkey=CDS;gene=gpmM;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312517.1;locus_tag=PHA55_RS23670;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_001352773.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4861380	4862639	.	+	.	ID=gene-PHA55_RS23675;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=PHA55_RS23675;old_locus_tag=PHA55_23670
NZ_CP116044.1	Protein Homology	CDS	4861380	4862639	.	+	0	ID=cds-WP_000196256.1;Parent=gene-PHA55_RS23675;Dbxref=Genbank:WP_000196256.1;Name=WP_000196256.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418070.6;locus_tag=PHA55_RS23675;product=murein hydrolase activator EnvC;protein_id=WP_000196256.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4862643	4863602	.	+	.	ID=gene-PHA55_RS23680;Name=yibQ;gbkey=Gene;gene=yibQ;gene_biotype=protein_coding;locus_tag=PHA55_RS23680;old_locus_tag=PHA55_23675
NZ_CP116044.1	Protein Homology	CDS	4862643	4863602	.	+	0	ID=cds-WP_000483856.1;Parent=gene-PHA55_RS23680;Dbxref=Genbank:WP_000483856.1;Name=WP_000483856.1;gbkey=CDS;gene=yibQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312519.2;locus_tag=PHA55_RS23680;product=divergent polysaccharide deacetylase family protein;protein_id=WP_000483856.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4863589	4864623	.	-	.	ID=gene-PHA55_RS23685;Name=waaH;gbkey=Gene;gene=waaH;gene_biotype=protein_coding;locus_tag=PHA55_RS23685;old_locus_tag=PHA55_23680
NZ_CP116044.1	Protein Homology	CDS	4863589	4864623	.	-	0	ID=cds-WP_000982091.1;Parent=gene-PHA55_RS23685;Dbxref=Genbank:WP_000982091.1;Name=WP_000982091.1;gbkey=CDS;gene=waaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418072.1;locus_tag=PHA55_RS23685;product=UDP-glucuronate:LPS(HepIII) glycosyltransferase;protein_id=WP_000982091.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4864862	4865887	.	-	.	ID=gene-PHA55_RS23690;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=PHA55_RS23690;old_locus_tag=PHA55_23685
NZ_CP116044.1	Protein Homology	CDS	4864862	4865887	.	-	0	ID=cds-WP_000646014.1;Parent=gene-PHA55_RS23690;Dbxref=Genbank:WP_000646014.1;Name=WP_000646014.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=PHA55_RS23690;product=L-threonine 3-dehydrogenase;protein_id=WP_000646014.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4865897	4867093	.	-	.	ID=gene-PHA55_RS23695;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=PHA55_RS23695;old_locus_tag=PHA55_23690
NZ_CP116044.1	Protein Homology	CDS	4865897	4867093	.	-	0	ID=cds-WP_001213834.1;Parent=gene-PHA55_RS23695;Dbxref=Genbank:WP_001213834.1;Name=WP_001213834.1;Ontology_term=GO:0006567,GO:0008890;gbkey=CDS;gene=kbl;go_function=glycine C-acetyltransferase activity|0008890||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1;locus_tag=PHA55_RS23695;product=glycine C-acetyltransferase;protein_id=WP_001213834.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4867307	4868239	.	+	.	ID=gene-PHA55_RS23700;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=PHA55_RS23700;old_locus_tag=PHA55_23695
NZ_CP116044.1	Protein Homology	CDS	4867307	4868239	.	+	0	ID=cds-WP_000587750.1;Parent=gene-PHA55_RS23700;Dbxref=Genbank:WP_000587750.1;Name=WP_000587750.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1;locus_tag=PHA55_RS23700;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_000587750.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4868249	4869295	.	+	.	ID=gene-PHA55_RS23705;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=PHA55_RS23705;old_locus_tag=PHA55_23700
NZ_CP116044.1	Protein Homology	CDS	4868249	4869295	.	+	0	ID=cds-WP_000699244.1;Parent=gene-PHA55_RS23705;Dbxref=Genbank:WP_000699244.1;Name=WP_000699244.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001685669.1;locus_tag=PHA55_RS23705;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=WP_000699244.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4869299	4870270	.	+	.	ID=gene-PHA55_RS23710;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=PHA55_RS23710;old_locus_tag=PHA55_23705
NZ_CP116044.1	Protein Homology	CDS	4869299	4870270	.	+	0	ID=cds-WP_001264572.1;Parent=gene-PHA55_RS23710;Dbxref=Genbank:WP_001264572.1;Name=WP_001264572.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244006.1;locus_tag=PHA55_RS23710;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WP_001264572.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4870340	4871593	.	-	.	ID=gene-PHA55_RS23715;Name=PHA55_RS23715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS23715;old_locus_tag=PHA55_23710
NZ_CP116044.1	Protein Homology	CDS	4870340	4871593	.	-	0	ID=cds-WP_001315905.1;Parent=gene-PHA55_RS23715;Dbxref=Genbank:WP_001315905.1;Name=WP_001315905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012602581.1;locus_tag=PHA55_RS23715;product=O-antigen ligase family protein;protein_id=WP_001315905.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4871639	4872622	.	-	.	ID=gene-PHA55_RS23720;Name=PHA55_RS23720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS23720;old_locus_tag=PHA55_23715
NZ_CP116044.1	Protein Homology	CDS	4871639	4872622	.	-	0	ID=cds-WP_000064012.1;Parent=gene-PHA55_RS23720;Dbxref=Genbank:WP_000064012.1;Name=WP_000064012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016246416.1;locus_tag=PHA55_RS23720;product=glycosyltransferase family 2 protein;protein_id=WP_000064012.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4872707	4873732	.	-	.	ID=gene-PHA55_RS23725;Name=PHA55_RS23725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS23725;old_locus_tag=PHA55_23720
NZ_CP116044.1	Protein Homology	CDS	4872707	4873732	.	-	0	ID=cds-WP_000364782.1;Parent=gene-PHA55_RS23725;Dbxref=Genbank:WP_000364782.1;Name=WP_000364782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000364797.1;locus_tag=PHA55_RS23725;product=UDP-galactose--(galactosyl) LPS alpha1%2C2-galactosyltransferase;protein_id=WP_000364782.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4873758	4874450	.	-	.	ID=gene-PHA55_RS23730;Name=rfaY;gbkey=Gene;gene=rfaY;gene_biotype=protein_coding;locus_tag=PHA55_RS23730;old_locus_tag=PHA55_23725
NZ_CP116044.1	Protein Homology	CDS	4873758	4874450	.	-	0	ID=cds-WP_000633091.1;Parent=gene-PHA55_RS23730;Dbxref=Genbank:WP_000633091.1;Name=WP_000633091.1;gbkey=CDS;gene=rfaY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000633080.1;locus_tag=PHA55_RS23730;product=lipopolysaccharide core heptose(II) kinase RfaY;protein_id=WP_000633091.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4874460	4875455	.	-	.	ID=gene-PHA55_RS23735;Name=PHA55_RS23735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS23735;old_locus_tag=PHA55_23730
NZ_CP116044.1	Protein Homology	CDS	4874460	4875455	.	-	0	ID=cds-WP_001001720.1;Parent=gene-PHA55_RS23735;Dbxref=Genbank:WP_001001720.1;Name=WP_001001720.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001001722.1;locus_tag=PHA55_RS23735;product=glycosyltransferase;protein_id=WP_001001720.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4875472	4876488	.	-	.	ID=gene-PHA55_RS23740;Name=waaO;gbkey=Gene;gene=waaO;gene_biotype=protein_coding;gene_synonym=rfaI;locus_tag=PHA55_RS23740;old_locus_tag=PHA55_23735
NZ_CP116044.1	Protein Homology	CDS	4875472	4876488	.	-	0	ID=cds-WP_001272734.1;Parent=gene-PHA55_RS23740;Dbxref=Genbank:WP_001272734.1;Name=WP_001272734.1;Ontology_term=GO:0009103,GO:0008918;gbkey=CDS;gene=waaO;go_function=lipopolysaccharide 3-alpha-galactosyltransferase activity|0008918||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540083.1;locus_tag=PHA55_RS23740;product=lipopolysaccharide 3-alpha-galactosyltransferase;protein_id=WP_001272734.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4876504	4877301	.	-	.	ID=gene-PHA55_RS23745;Name=rfaP;gbkey=Gene;gene=rfaP;gene_biotype=protein_coding;locus_tag=PHA55_RS23745;old_locus_tag=PHA55_23740
NZ_CP116044.1	Protein Homology	CDS	4876504	4877301	.	-	0	ID=cds-WP_001315906.1;Parent=gene-PHA55_RS23745;Dbxref=Genbank:WP_001315906.1;Name=WP_001315906.1;Ontology_term=GO:0009103,GO:0016301;gbkey=CDS;gene=rfaP;go_function=kinase activity|0016301||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312532.2;locus_tag=PHA55_RS23745;product=lipopolysaccharide core heptose(I) kinase RfaP;protein_id=WP_001315906.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4877294	4878418	.	-	.	ID=gene-PHA55_RS23750;Name=waaG;gbkey=Gene;gene=waaG;gene_biotype=protein_coding;locus_tag=PHA55_RS23750;old_locus_tag=PHA55_23745
NZ_CP116044.1	Protein Homology	CDS	4877294	4878418	.	-	0	ID=cds-WP_271287480.1;Parent=gene-PHA55_RS23750;Dbxref=Genbank:WP_271287480.1;Name=WP_271287480.1;gbkey=CDS;gene=waaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312533.1;locus_tag=PHA55_RS23750;product=glycosyltransferase family 4 protein;protein_id=WP_271287480.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4878415	4879473	.	-	.	ID=gene-PHA55_RS23755;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=PHA55_RS23755;old_locus_tag=PHA55_23750
NZ_CP116044.1	Protein Homology	CDS	4878415	4879473	.	-	0	ID=cds-WP_000360412.1;Parent=gene-PHA55_RS23755;Dbxref=Genbank:WP_000360412.1;Name=WP_000360412.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709409.1;locus_tag=PHA55_RS23755;product=lipopolysaccharide core heptosyltransferase RfaQ;protein_id=WP_000360412.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4879886	4881163	.	+	.	ID=gene-PHA55_RS23760;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=PHA55_RS23760;old_locus_tag=PHA55_23755
NZ_CP116044.1	Protein Homology	CDS	4879886	4881163	.	+	0	ID=cds-WP_000891564.1;Parent=gene-PHA55_RS23760;Dbxref=Genbank:WP_000891564.1;Name=WP_000891564.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312535.1;locus_tag=PHA55_RS23760;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_000891564.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4881171	4881650	.	+	.	ID=gene-PHA55_RS23765;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=PHA55_RS23765;old_locus_tag=PHA55_23760
NZ_CP116044.1	Protein Homology	CDS	4881171	4881650	.	+	0	ID=cds-WP_001171866.1;Parent=gene-PHA55_RS23765;Dbxref=Genbank:WP_001171866.1;Name=WP_001171866.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312536.1;locus_tag=PHA55_RS23765;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_001171866.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4881689	4882498	.	-	.	ID=gene-PHA55_RS23770;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=PHA55_RS23770;old_locus_tag=PHA55_23765
NZ_CP116044.1	Protein Homology	CDS	4881689	4882498	.	-	0	ID=cds-WP_038996735.1;Parent=gene-PHA55_RS23770;Dbxref=Genbank:WP_038996735.1;Name=WP_038996735.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312537.1;locus_tag=PHA55_RS23770;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_038996735.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4882596	4882763	.	-	.	ID=gene-PHA55_RS23775;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=PHA55_RS23775;old_locus_tag=PHA55_23770
NZ_CP116044.1	Protein Homology	CDS	4882596	4882763	.	-	0	ID=cds-WP_001051798.1;Parent=gene-PHA55_RS23775;Dbxref=Genbank:WP_001051798.1;Name=WP_001051798.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=PHA55_RS23775;product=50S ribosomal protein L33;protein_id=WP_001051798.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4882784	4883020	.	-	.	ID=gene-PHA55_RS23780;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=PHA55_RS23780;old_locus_tag=PHA55_23775
NZ_CP116044.1	Protein Homology	CDS	4882784	4883020	.	-	0	ID=cds-WP_000091955.1;Parent=gene-PHA55_RS23780;Dbxref=Genbank:WP_000091955.1;Name=WP_000091955.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rpmB;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=PHA55_RS23780;product=50S ribosomal protein L28;protein_id=WP_000091955.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4883237	4883905	.	-	.	ID=gene-PHA55_RS23785;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=PHA55_RS23785;old_locus_tag=PHA55_23780
NZ_CP116044.1	Protein Homology	CDS	4883237	4883905	.	-	0	ID=cds-WP_001298959.1;Parent=gene-PHA55_RS23785;Dbxref=Genbank:WP_001298959.1;Name=WP_001298959.1;Ontology_term=GO:0006281,GO:0003677;gbkey=CDS;gene=radC;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418095.4;locus_tag=PHA55_RS23785;product=DNA repair protein RadC;protein_id=WP_001298959.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4884077	4885297	.	+	.	ID=gene-PHA55_RS23790;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=PHA55_RS23790;old_locus_tag=PHA55_23785
NZ_CP116044.1	Protein Homology	CDS	4884077	4885297	.	+	0	ID=cds-WP_000050139.1;Parent=gene-PHA55_RS23790;Dbxref=Genbank:WP_000050139.1;Name=WP_000050139.1;Ontology_term=GO:0015937,GO:0015939,GO:0004632,GO:0004633;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate metabolic process|0015939||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418096.4;locus_tag=PHA55_RS23790;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_000050139.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4885275	4885733	.	+	.	ID=gene-PHA55_RS23795;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=PHA55_RS23795;old_locus_tag=PHA55_23790
NZ_CP116044.1	Protein Homology	CDS	4885275	4885733	.	+	0	ID=cds-WP_000976070.1;Parent=gene-PHA55_RS23795;Dbxref=Genbank:WP_000976070.1;Name=WP_000976070.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=PHA55_RS23795;product=dUTP diphosphatase;protein_id=WP_000976070.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4885840	4886436	.	+	.	ID=gene-PHA55_RS23800;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=PHA55_RS23800;old_locus_tag=PHA55_23795
NZ_CP116044.1	Protein Homology	CDS	4885840	4886436	.	+	0	ID=cds-WP_000818601.1;Parent=gene-PHA55_RS23800;Dbxref=Genbank:WP_000818601.1;Name=WP_000818601.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=PHA55_RS23800;product=nucleoid occlusion factor SlmA;protein_id=WP_000818601.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4886473	4887114	.	-	.	ID=gene-PHA55_RS23805;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=PHA55_RS23805;old_locus_tag=PHA55_23800
NZ_CP116044.1	Protein Homology	CDS	4886473	4887114	.	-	0	ID=cds-WP_000806177.1;Parent=gene-PHA55_RS23805;Dbxref=Genbank:WP_000806177.1;Name=WP_000806177.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418099.1;locus_tag=PHA55_RS23805;product=orotate phosphoribosyltransferase;protein_id=WP_000806177.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4887180	4887896	.	-	.	ID=gene-PHA55_RS23810;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=PHA55_RS23810;old_locus_tag=PHA55_23805
NZ_CP116044.1	Protein Homology	CDS	4887180	4887896	.	-	0	ID=cds-WP_001247089.1;Parent=gene-PHA55_RS23810;Dbxref=Genbank:WP_001247089.1;Name=WP_001247089.1;Ontology_term=GO:0008033,GO:0004549;gbkey=CDS;gene=rph;go_function=tRNA-specific ribonuclease activity|0004549||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=PHA55_RS23810;product=ribonuclease PH;protein_id=WP_001247089.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4888023	4888886	.	+	.	ID=gene-PHA55_RS23815;Name=yicC;gbkey=Gene;gene=yicC;gene_biotype=protein_coding;locus_tag=PHA55_RS23815;old_locus_tag=PHA55_23810
NZ_CP116044.1	Protein Homology	CDS	4888023	4888886	.	+	0	ID=cds-WP_000621336.1;Parent=gene-PHA55_RS23815;Dbxref=Genbank:WP_000621336.1;Name=WP_000621336.1;gbkey=CDS;gene=yicC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=PHA55_RS23815;product=YicC family protein;protein_id=WP_000621336.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4889107	4889931	.	+	.	ID=gene-PHA55_RS23820;Name=dinD;gbkey=Gene;gene=dinD;gene_biotype=protein_coding;locus_tag=PHA55_RS23820;old_locus_tag=PHA55_23815
NZ_CP116044.1	Protein Homology	CDS	4889107	4889931	.	+	0	ID=cds-WP_001297374.1;Parent=gene-PHA55_RS23820;Dbxref=Genbank:WP_001297374.1;Name=WP_001297374.1;gbkey=CDS;gene=dinD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312547.2;locus_tag=PHA55_RS23820;product=DNA damage-inducible protein D;protein_id=WP_001297374.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4890223	4890840	.	+	.	ID=gene-PHA55_RS23825;Name=yicG;gbkey=Gene;gene=yicG;gene_biotype=protein_coding;locus_tag=PHA55_RS23825;old_locus_tag=PHA55_23820
NZ_CP116044.1	Protein Homology	CDS	4890223	4890840	.	+	0	ID=cds-WP_000924289.1;Parent=gene-PHA55_RS23825;Dbxref=Genbank:WP_000924289.1;Name=WP_000924289.1;gbkey=CDS;gene=yicG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312548.2;locus_tag=PHA55_RS23825;product=trimeric intracellular cation channel family protein;protein_id=WP_000924289.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4890837	4892519	.	-	.	ID=gene-PHA55_RS23830;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=PHA55_RS23830;old_locus_tag=PHA55_23825
NZ_CP116044.1	Protein Homology	CDS	4890837	4892519	.	-	0	ID=cds-WP_000870052.1;Parent=gene-PHA55_RS23830;Dbxref=Genbank:WP_000870052.1;Name=WP_000870052.1;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312549.2;locus_tag=PHA55_RS23830;product=NAD-dependent DNA ligase LigB;protein_id=WP_000870052.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4892777	4893400	.	+	.	ID=gene-PHA55_RS23835;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=PHA55_RS23835;old_locus_tag=PHA55_23830
NZ_CP116044.1	Protein Homology	CDS	4892777	4893400	.	+	0	ID=cds-WP_001295237.1;Parent=gene-PHA55_RS23835;Dbxref=Genbank:WP_001295237.1;Name=WP_001295237.1;Ontology_term=GO:0015949,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=PHA55_RS23835;product=guanylate kinase;protein_id=WP_001295237.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4893455	4893730	.	+	.	ID=gene-PHA55_RS23840;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=PHA55_RS23840;old_locus_tag=PHA55_23835
NZ_CP116044.1	Protein Homology	CDS	4893455	4893730	.	+	0	ID=cds-WP_000135058.1;Parent=gene-PHA55_RS23840;Dbxref=Genbank:WP_000135058.1;Name=WP_000135058.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoZ;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=PHA55_RS23840;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_000135058.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4893749	4895857	.	+	.	ID=gene-PHA55_RS23845;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=PHA55_RS23845;old_locus_tag=PHA55_23840
NZ_CP116044.1	Protein Homology	CDS	4893749	4895857	.	+	0	ID=cds-WP_000280488.1;Parent=gene-PHA55_RS23845;Dbxref=Genbank:WP_000280488.1;Name=WP_000280488.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312552.1;locus_tag=PHA55_RS23845;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_000280488.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4895864	4896553	.	+	.	ID=gene-PHA55_RS23850;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=PHA55_RS23850;old_locus_tag=PHA55_23845
NZ_CP116044.1	Protein Homology	CDS	4895864	4896553	.	+	0	ID=cds-WP_195466859.1;Parent=gene-PHA55_RS23850;Dbxref=Genbank:WP_195466859.1;Name=WP_195466859.1;Ontology_term=GO:0030488,GO:0008173,GO:0009020;gbkey=CDS;gene=trmH;go_function=RNA methyltransferase activity|0008173||IEA,tRNA (guanosine-2'-O-)-methyltransferase activity|0009020||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418108.1;locus_tag=PHA55_RS23850;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WP_195466859.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4896559	4898640	.	+	.	ID=gene-PHA55_RS23855;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=PHA55_RS23855;old_locus_tag=PHA55_23850
NZ_CP116044.1	Protein Homology	CDS	4896559	4898640	.	+	0	ID=cds-WP_033560866.1;Parent=gene-PHA55_RS23855;Dbxref=Genbank:WP_033560866.1;Name=WP_033560866.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312554.1;locus_tag=PHA55_RS23855;product=ATP-dependent DNA helicase RecG;protein_id=WP_033560866.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4898625	4899491	.	-	.	ID=gene-PHA55_RS23860;Name=PHA55_RS23860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS23860;old_locus_tag=PHA55_23855
NZ_CP116044.1	Protein Homology	CDS	4898625	4899491	.	-	0	ID=cds-WP_000747329.1;Parent=gene-PHA55_RS23860;Dbxref=Genbank:WP_000747329.1;Name=WP_000747329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312555.2;locus_tag=PHA55_RS23860;product=hypothetical protein;protein_id=WP_000747329.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4899494	4900699	.	-	.	ID=gene-PHA55_RS23865;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=PHA55_RS23865;old_locus_tag=PHA55_23860
NZ_CP116044.1	Protein Homology	CDS	4899494	4900699	.	-	0	ID=cds-WP_000468836.1;Parent=gene-PHA55_RS23865;Dbxref=Genbank:WP_000468836.1;Name=WP_000468836.1;Ontology_term=GO:0015813,GO:0015501;gbkey=CDS;gene=gltS;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312556.1;locus_tag=PHA55_RS23865;product=sodium/glutamate symporter;protein_id=WP_000468836.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4900979	4902370	.	+	.	ID=gene-PHA55_RS23870;Name=xanP;gbkey=Gene;gene=xanP;gene_biotype=protein_coding;locus_tag=PHA55_RS23870;old_locus_tag=PHA55_23865
NZ_CP116044.1	Protein Homology	CDS	4900979	4902370	.	+	0	ID=cds-WP_001295238.1;Parent=gene-PHA55_RS23870;Dbxref=Genbank:WP_001295238.1;Name=WP_001295238.1;gbkey=CDS;gene=xanP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312557.1;locus_tag=PHA55_RS23870;product=xanthine/proton symporter XanP;protein_id=WP_001295238.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4902491	4904200	.	+	.	ID=gene-PHA55_RS23875;Name=yicH;gbkey=Gene;gene=yicH;gene_biotype=protein_coding;locus_tag=PHA55_RS23875;old_locus_tag=PHA55_23870
NZ_CP116044.1	Protein Homology	CDS	4902491	4904200	.	+	0	ID=cds-WP_001295239.1;Parent=gene-PHA55_RS23875;Dbxref=Genbank:WP_001295239.1;Name=WP_001295239.1;gbkey=CDS;gene=yicH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418112.1;locus_tag=PHA55_RS23875;product=AsmA family protein;protein_id=WP_001295239.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4904253	4906571	.	-	.	ID=gene-PHA55_RS23880;Name=yicI;gbkey=Gene;gene=yicI;gene_biotype=protein_coding;locus_tag=PHA55_RS23880;old_locus_tag=PHA55_23875
NZ_CP116044.1	Protein Homology	CDS	4904253	4906571	.	-	0	ID=cds-WP_033560865.1;Parent=gene-PHA55_RS23880;Dbxref=Genbank:WP_033560865.1;Name=WP_033560865.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yicI;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418113.1;locus_tag=PHA55_RS23880;product=alpha-xylosidase;protein_id=WP_033560865.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4906581	4907963	.	-	.	ID=gene-PHA55_RS23885;Name=yicJ;gbkey=Gene;gene=yicJ;gene_biotype=protein_coding;locus_tag=PHA55_RS23885;old_locus_tag=PHA55_23880
NZ_CP116044.1	Protein Homology	CDS	4906581	4907963	.	-	0	ID=cds-WP_000834439.1;Parent=gene-PHA55_RS23885;Dbxref=Genbank:WP_000834439.1;Name=WP_000834439.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0016020;gbkey=CDS;gene=yicJ;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418114.4;locus_tag=PHA55_RS23885;product=glycoside-pentoside-hexuronide family transporter;protein_id=WP_000834439.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4908256	4908350	.	+	.	ID=gene-PHA55_RS23890;Name=PHA55_RS23890;gbkey=Gene;gene_biotype=tRNA;locus_tag=PHA55_RS23890;old_locus_tag=PHA55_23885
NZ_CP116044.1	tRNAscan-SE	tRNA	4908256	4908350	.	+	.	ID=rna-PHA55_RS23890;Parent=gene-PHA55_RS23890;anticodon=(pos:4908290..4908292);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS23890;product=tRNA-Sec
NZ_CP116044.1	tRNAscan-SE	exon	4908256	4908350	.	+	.	ID=exon-PHA55_RS23890-1;Parent=rna-PHA55_RS23890;anticodon=(pos:4908290..4908292);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PHA55_RS23890;product=tRNA-Sec
NZ_CP116044.1	RefSeq	pseudogene	4908429	4908590	.	+	.	ID=gene-PHA55_RS23895;Name=rhuM;end_range=4908590,.;gbkey=Gene;gene=rhuM;gene_biotype=pseudogene;locus_tag=PHA55_RS23895;old_locus_tag=PHA55_23890;partial=true;pseudo=true;start_range=.,4908429
NZ_CP116044.1	Protein Homology	CDS	4908429	4908590	.	+	0	ID=cds-PHA55_RS23895;Parent=gene-PHA55_RS23895;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4908590,.;gbkey=CDS;gene=rhuM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000774140.1;locus_tag=PHA55_RS23895;partial=true;product=RhuM family protein;pseudo=true;start_range=.,4908429;transl_table=11
NZ_CP116044.1	RefSeq	gene	4908987	4910171	.	+	.	ID=gene-PHA55_RS23900;Name=setC;gbkey=Gene;gene=setC;gene_biotype=protein_coding;locus_tag=PHA55_RS23900;old_locus_tag=PHA55_23895
NZ_CP116044.1	Protein Homology	CDS	4908987	4910171	.	+	0	ID=cds-WP_001172875.1;Parent=gene-PHA55_RS23900;Dbxref=Genbank:WP_001172875.1;Name=WP_001172875.1;Ontology_term=GO:0008643,GO:0005351;gbkey=CDS;gene=setC;go_function=carbohydrate:proton symporter activity|0005351||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418115.1;locus_tag=PHA55_RS23900;product=sugar efflux transporter;protein_id=WP_001172875.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4910282	4911205	.	+	.	ID=gene-PHA55_RS23905;Name=yicL;gbkey=Gene;gene=yicL;gene_biotype=protein_coding;locus_tag=PHA55_RS23905;old_locus_tag=PHA55_23900
NZ_CP116044.1	Protein Homology	CDS	4910282	4911205	.	+	0	ID=cds-WP_000535960.1;Parent=gene-PHA55_RS23905;Dbxref=Genbank:WP_000535960.1;Name=WP_000535960.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yicL;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418116.1;locus_tag=PHA55_RS23905;product=carboxylate/amino acid/amine transporter;protein_id=WP_000535960.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4911209	4912027	.	-	.	ID=gene-PHA55_RS23910;Name=nlpA;gbkey=Gene;gene=nlpA;gene_biotype=protein_coding;locus_tag=PHA55_RS23910;old_locus_tag=PHA55_23905
NZ_CP116044.1	Protein Homology	CDS	4911209	4912027	.	-	0	ID=cds-WP_000779394.1;Parent=gene-PHA55_RS23910;Dbxref=Genbank:WP_000779394.1;Name=WP_000779394.1;gbkey=CDS;gene=nlpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418117.1;locus_tag=PHA55_RS23910;product=lipoprotein NlpA;protein_id=WP_000779394.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4912249	4912542	.	+	.	ID=gene-PHA55_RS23915;Name=yicS;gbkey=Gene;gene=yicS;gene_biotype=protein_coding;locus_tag=PHA55_RS23915;old_locus_tag=PHA55_23910
NZ_CP116044.1	Protein Homology	CDS	4912249	4912542	.	+	0	ID=cds-WP_000805509.1;Parent=gene-PHA55_RS23915;Dbxref=Genbank:WP_000805509.1;Name=WP_000805509.1;gbkey=CDS;gene=yicS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588471.1;locus_tag=PHA55_RS23915;product=protein YicS;protein_id=WP_000805509.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4912583	4913773	.	-	.	ID=gene-PHA55_RS23920;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;locus_tag=PHA55_RS23920;old_locus_tag=PHA55_23915
NZ_CP116044.1	Protein Homology	CDS	4912583	4913773	.	-	0	ID=cds-WP_001288549.1;Parent=gene-PHA55_RS23920;Dbxref=Genbank:WP_001288549.1;Name=WP_001288549.1;Ontology_term=GO:0015860,GO:0015211,GO:0016020;gbkey=CDS;gene=nepI;go_component=membrane|0016020||IEA;go_function=purine nucleoside transmembrane transporter activity|0015211||IEA;go_process=purine nucleoside transmembrane transport|0015860||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418118.2;locus_tag=PHA55_RS23920;product=purine ribonucleoside efflux pump NepI;protein_id=WP_001288549.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4913984	4914436	.	-	.	ID=gene-PHA55_RS23925;Name=yicN;gbkey=Gene;gene=yicN;gene_biotype=protein_coding;locus_tag=PHA55_RS23925;old_locus_tag=PHA55_23920
NZ_CP116044.1	Protein Homology	CDS	4913984	4914436	.	-	0	ID=cds-WP_001295241.1;Parent=gene-PHA55_RS23925;Dbxref=Genbank:WP_001295241.1;Name=WP_001295241.1;gbkey=CDS;gene=yicN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418119.2;locus_tag=PHA55_RS23925;product=DUF1198 domain-containing protein;protein_id=WP_001295241.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4914489	4915823	.	-	.	ID=gene-PHA55_RS23930;Name=adeQ;gbkey=Gene;gene=adeQ;gene_biotype=protein_coding;gene_synonym=yicO;locus_tag=PHA55_RS23930;old_locus_tag=PHA55_23925
NZ_CP116044.1	Protein Homology	CDS	4914489	4915823	.	-	0	ID=cds-WP_001058151.1;Parent=gene-PHA55_RS23930;Dbxref=Genbank:WP_001058151.1;Name=WP_001058151.1;gbkey=CDS;gene=adeQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418120.2;locus_tag=PHA55_RS23930;product=adenine permease AdeQ;protein_id=WP_001058151.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4915998	4917764	.	+	.	ID=gene-PHA55_RS23935;Name=adeD;gbkey=Gene;gene=adeD;gene_biotype=protein_coding;locus_tag=PHA55_RS23935;old_locus_tag=PHA55_23930
NZ_CP116044.1	Protein Homology	CDS	4915998	4917764	.	+	0	ID=cds-WP_001065695.1;Parent=gene-PHA55_RS23935;Dbxref=Genbank:WP_001065695.1;Name=WP_001065695.1;gbkey=CDS;gene=adeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418121.1;locus_tag=PHA55_RS23935;product=adenine deaminase;protein_id=WP_001065695.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4917809	4919200	.	-	.	ID=gene-PHA55_RS23940;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=PHA55_RS23940;old_locus_tag=PHA55_23935
NZ_CP116044.1	Protein Homology	CDS	4917809	4919200	.	-	0	ID=cds-WP_000879194.1;Parent=gene-PHA55_RS23940;Dbxref=Genbank:WP_000879194.1;Name=WP_000879194.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312630.1;locus_tag=PHA55_RS23940;product=hexose-6-phosphate:phosphate antiporter;protein_id=WP_000879194.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4919338	4920657	.	-	.	ID=gene-PHA55_RS23945;Name=uhpC;gbkey=Gene;gene=uhpC;gene_biotype=protein_coding;locus_tag=PHA55_RS23945;old_locus_tag=PHA55_23940
NZ_CP116044.1	Protein Homology	CDS	4919338	4920657	.	-	0	ID=cds-WP_000936566.1;Parent=gene-PHA55_RS23945;Dbxref=Genbank:WP_000936566.1;Name=WP_000936566.1;gbkey=CDS;gene=uhpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418123.2;locus_tag=PHA55_RS23945;product=MFS transporter family glucose-6-phosphate receptor UhpC;protein_id=WP_000936566.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4920667	4922169	.	-	.	ID=gene-PHA55_RS23950;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=PHA55_RS23950;old_locus_tag=PHA55_23945
NZ_CP116044.1	Protein Homology	CDS	4920667	4922169	.	-	0	ID=cds-WP_001295243.1;Parent=gene-PHA55_RS23950;Dbxref=Genbank:WP_001295243.1;Name=WP_001295243.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=uhpB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418124.4;locus_tag=PHA55_RS23950;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=WP_001295243.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4922169	4922759	.	-	.	ID=gene-PHA55_RS23955;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=PHA55_RS23955;old_locus_tag=PHA55_23950
NZ_CP116044.1	Protein Homology	CDS	4922169	4922759	.	-	0	ID=cds-WP_000633668.1;Parent=gene-PHA55_RS23955;Dbxref=Genbank:WP_000633668.1;Name=WP_000633668.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=uhpA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312633.1;locus_tag=PHA55_RS23955;product=transcriptional regulator UhpA;protein_id=WP_000633668.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4922834	4923124	.	-	.	ID=gene-PHA55_RS23960;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=PHA55_RS23960;old_locus_tag=PHA55_23955
NZ_CP116044.1	Protein Homology	CDS	4922834	4923124	.	-	0	ID=cds-WP_001181706.1;Parent=gene-PHA55_RS23960;Dbxref=Genbank:WP_001181706.1;Name=WP_001181706.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312638.1;locus_tag=PHA55_RS23960;product=acetolactate synthase small subunit;protein_id=WP_001181706.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4923128	4924816	.	-	.	ID=gene-PHA55_RS23965;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=PHA55_RS23965;old_locus_tag=PHA55_23960
NZ_CP116044.1	Protein Homology	CDS	4923128	4924816	.	-	0	ID=cds-WP_000168432.1;Parent=gene-PHA55_RS23965;Dbxref=Genbank:WP_000168432.1;Name=WP_000168432.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418127.1;locus_tag=PHA55_RS23965;product=acetolactate synthase large subunit;protein_id=WP_000168432.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4924922	4925020	.	-	.	ID=gene-PHA55_RS23970;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=PHA55_RS23970;old_locus_tag=PHA55_23965
NZ_CP116044.1	Protein Homology	CDS	4924922	4925020	.	-	0	ID=cds-WP_001315912.1;Parent=gene-PHA55_RS23970;Dbxref=Genbank:WP_001315912.1;Name=WP_001315912.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418128.1;locus_tag=PHA55_RS23970;product=ilvB operon leader peptide IvbL;protein_id=WP_001315912.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4925584	4925673	.	+	.	ID=gene-PHA55_RS23975;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;locus_tag=PHA55_RS23975;old_locus_tag=PHA55_23970
NZ_CP116044.1	Protein Homology	CDS	4925584	4925673	.	+	0	ID=cds-WP_000060506.1;Parent=gene-PHA55_RS23975;Dbxref=Genbank:WP_000060506.1;Name=WP_000060506.1;gbkey=CDS;gene=tisB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502662.1;locus_tag=PHA55_RS23975;product=type I toxin-antitoxin system toxin TisB;protein_id=WP_000060506.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4925936	4926010	.	-	.	ID=gene-PHA55_RS23980;Name=ysdE;gbkey=Gene;gene=ysdE;gene_biotype=protein_coding;locus_tag=PHA55_RS23980;old_locus_tag=PHA55_23975
NZ_CP116044.1	Protein Homology	CDS	4925936	4926010	.	-	0	ID=cds-WP_211180519.1;Parent=gene-PHA55_RS23980;Dbxref=Genbank:WP_211180519.1;Name=WP_211180519.1;gbkey=CDS;gene=ysdE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051212.1;locus_tag=PHA55_RS23980;product=protein YsdE;protein_id=WP_211180519.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4926092	4927276	.	+	.	ID=gene-PHA55_RS23985;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=PHA55_RS23985;old_locus_tag=PHA55_23980
NZ_CP116044.1	Protein Homology	CDS	4926092	4927276	.	+	0	ID=cds-WP_000828746.1;Parent=gene-PHA55_RS23985;Dbxref=Genbank:WP_000828746.1;Name=WP_000828746.1;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418129.2;locus_tag=PHA55_RS23985;product=multidrug efflux MFS transporter EmrD;protein_id=WP_000828746.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4927284	4927781	.	-	.	ID=gene-PHA55_RS23990;Name=yidF;gbkey=Gene;gene=yidF;gene_biotype=protein_coding;locus_tag=PHA55_RS23990;old_locus_tag=PHA55_23985
NZ_CP116044.1	Protein Homology	CDS	4927284	4927781	.	-	0	ID=cds-WP_000148063.1;Parent=gene-PHA55_RS23990;Dbxref=Genbank:WP_000148063.1;Name=WP_000148063.1;gbkey=CDS;gene=yidF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709521.1;locus_tag=PHA55_RS23990;product=radical SAM protein;protein_id=WP_000148063.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4927778	4928140	.	-	.	ID=gene-PHA55_RS23995;Name=yidG;gbkey=Gene;gene=yidG;gene_biotype=protein_coding;locus_tag=PHA55_RS23995;old_locus_tag=PHA55_23990
NZ_CP116044.1	Protein Homology	CDS	4927778	4928140	.	-	0	ID=cds-WP_001113432.1;Parent=gene-PHA55_RS23995;Dbxref=Genbank:WP_001113432.1;Name=WP_001113432.1;gbkey=CDS;gene=yidG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312643.1;locus_tag=PHA55_RS23995;product=DUF202 domain-containing protein;protein_id=WP_001113432.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4928130	4928477	.	-	.	ID=gene-PHA55_RS24000;Name=yidH;gbkey=Gene;gene=yidH;gene_biotype=protein_coding;locus_tag=PHA55_RS24000;old_locus_tag=PHA55_23995
NZ_CP116044.1	Protein Homology	CDS	4928130	4928477	.	-	0	ID=cds-WP_000703959.1;Parent=gene-PHA55_RS24000;Dbxref=Genbank:WP_000703959.1;Name=WP_000703959.1;gbkey=CDS;gene=yidH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312644.1;locus_tag=PHA55_RS24000;product=YidH family protein;protein_id=WP_000703959.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4928587	4929036	.	+	.	ID=gene-PHA55_RS24005;Name=yidI;gbkey=Gene;gene=yidI;gene_biotype=protein_coding;locus_tag=PHA55_RS24005;old_locus_tag=PHA55_24000
NZ_CP116044.1	Protein Homology	CDS	4928587	4929036	.	+	0	ID=cds-WP_000511287.1;Parent=gene-PHA55_RS24005;Dbxref=Genbank:WP_000511287.1;Name=WP_000511287.1;gbkey=CDS;gene=yidI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418133.1;locus_tag=PHA55_RS24005;product=protein YidI;protein_id=WP_000511287.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4929083	4930576	.	-	.	ID=gene-PHA55_RS24010;Name=yidJ;gbkey=Gene;gene=yidJ;gene_biotype=protein_coding;locus_tag=PHA55_RS24010;old_locus_tag=PHA55_24005
NZ_CP116044.1	Protein Homology	CDS	4929083	4930576	.	-	0	ID=cds-WP_000828483.1;Parent=gene-PHA55_RS24010;Dbxref=Genbank:WP_000828483.1;Name=WP_000828483.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yidJ;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418134.1;locus_tag=PHA55_RS24010;product=sulfatase-like hydrolase/transferase;protein_id=WP_000828483.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4930573	4932288	.	-	.	ID=gene-PHA55_RS24015;Name=yidK;gbkey=Gene;gene=yidK;gene_biotype=protein_coding;locus_tag=PHA55_RS24015;old_locus_tag=PHA55_24010
NZ_CP116044.1	Protein Homology	CDS	4930573	4932288	.	-	0	ID=cds-WP_001087147.1;Parent=gene-PHA55_RS24015;Dbxref=Genbank:WP_001087147.1;Name=WP_001087147.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yidK;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418135.1;locus_tag=PHA55_RS24015;product=solute:sodium symporter family transporter;protein_id=WP_001087147.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4932454	4933347	.	+	.	ID=gene-PHA55_RS24020;Name=yidL;gbkey=Gene;gene=yidL;gene_biotype=protein_coding;locus_tag=PHA55_RS24020;old_locus_tag=PHA55_24015
NZ_CP116044.1	Protein Homology	CDS	4932454	4933347	.	+	0	ID=cds-WP_001013540.1;Parent=gene-PHA55_RS24020;Dbxref=Genbank:WP_001013540.1;Name=WP_001013540.1;gbkey=CDS;gene=yidL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418136.2;locus_tag=PHA55_RS24020;product=AraC family transcriptional regulator;protein_id=WP_001013540.1;transl_table=11
NZ_CP116044.1	RefSeq	pseudogene	4933344	4934158	.	-	.	ID=gene-PHA55_RS24025;Name=PHA55_RS24025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS24025;old_locus_tag=PHA55_24020;pseudo=true
NZ_CP116044.1	Protein Homology	CDS	4933344	4934158	.	-	0	ID=cds-PHA55_RS24025;Parent=gene-PHA55_RS24025;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312649.2;locus_tag=PHA55_RS24025;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP116044.1	RefSeq	gene	4934158	4935774	.	-	.	ID=gene-PHA55_RS24030;Name=PHA55_RS24030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24030;old_locus_tag=PHA55_24025
NZ_CP116044.1	Protein Homology	CDS	4934158	4935774	.	-	0	ID=cds-WP_000952141.1;Parent=gene-PHA55_RS24030;Dbxref=Genbank:WP_000952141.1;Name=WP_000952141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312650.2;locus_tag=PHA55_RS24030;product=PTS sugar transporter subunit IIB;protein_id=WP_000952141.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4936070	4936786	.	+	.	ID=gene-PHA55_RS24035;Name=yidP;gbkey=Gene;gene=yidP;gene_biotype=protein_coding;locus_tag=PHA55_RS24035;old_locus_tag=PHA55_24030
NZ_CP116044.1	Protein Homology	CDS	4936070	4936786	.	+	0	ID=cds-WP_001300779.1;Parent=gene-PHA55_RS24035;Dbxref=Genbank:WP_001300779.1;Name=WP_001300779.1;gbkey=CDS;gene=yidP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418139.1;locus_tag=PHA55_RS24035;product=GntR family transcriptional regulator;protein_id=WP_001300779.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4936783	4938444	.	-	.	ID=gene-PHA55_RS24040;Name=yidE;gbkey=Gene;gene=yidE;gene_biotype=protein_coding;locus_tag=PHA55_RS24040;old_locus_tag=PHA55_24035
NZ_CP116044.1	Protein Homology	CDS	4936783	4938444	.	-	0	ID=cds-WP_001279752.1;Parent=gene-PHA55_RS24040;Dbxref=Genbank:WP_001279752.1;Name=WP_001279752.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;gene=yidE;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312652.2;locus_tag=PHA55_RS24040;product=putative transporter;protein_id=WP_001279752.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4938641	4939069	.	-	.	ID=gene-PHA55_RS24045;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=PHA55_RS24045;old_locus_tag=PHA55_24040
NZ_CP116044.1	Protein Homology	CDS	4938641	4939069	.	-	0	ID=cds-WP_001243431.1;Parent=gene-PHA55_RS24045;Dbxref=Genbank:WP_001243431.1;Name=WP_001243431.1;gbkey=CDS;gene=ibpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709512.2;locus_tag=PHA55_RS24045;product=heat shock chaperone IbpB;protein_id=WP_001243431.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4939181	4939594	.	-	.	ID=gene-PHA55_RS24050;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=PHA55_RS24050;old_locus_tag=PHA55_24045
NZ_CP116044.1	Protein Homology	CDS	4939181	4939594	.	-	0	ID=cds-WP_001243437.1;Parent=gene-PHA55_RS24050;Dbxref=Genbank:WP_001243437.1;Name=WP_001243437.1;gbkey=CDS;gene=ibpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=PHA55_RS24050;product=heat shock chaperone IbpA;protein_id=WP_001243437.1;transl_table=11
NZ_CP116044.1	cmsearch	sequence_feature	4939588	4939660	.	-	.	ID=id-NZ_CP116044.1:4939588..4939660;Dbxref=RFAM:RF01832;Note=ROSE (Repression Of Heat Shock gene Expression) occurs in the 5'-region of heat shock genes and acts as an RNA thermometer to modulate expression.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1
NZ_CP116044.1	RefSeq	gene	4939900	4940232	.	+	.	ID=gene-PHA55_RS24055;Name=yidQ;gbkey=Gene;gene=yidQ;gene_biotype=protein_coding;locus_tag=PHA55_RS24055;old_locus_tag=PHA55_24050
NZ_CP116044.1	Protein Homology	CDS	4939900	4940232	.	+	0	ID=cds-WP_000620888.1;Parent=gene-PHA55_RS24055;Dbxref=Genbank:WP_000620888.1;Name=WP_000620888.1;gbkey=CDS;gene=yidQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418143.2;locus_tag=PHA55_RS24055;product=YceK/YidQ family lipoprotein;protein_id=WP_000620888.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4940234	4941448	.	-	.	ID=gene-PHA55_RS24060;Name=yidR;gbkey=Gene;gene=yidR;gene_biotype=protein_coding;locus_tag=PHA55_RS24060;old_locus_tag=PHA55_24055
NZ_CP116044.1	Protein Homology	CDS	4940234	4941448	.	-	0	ID=cds-WP_001295245.1;Parent=gene-PHA55_RS24060;Dbxref=Genbank:WP_001295245.1;Name=WP_001295245.1;gbkey=CDS;gene=yidR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312656.3;locus_tag=PHA55_RS24060;product=DUF3748 domain-containing protein;protein_id=WP_001295245.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4941549	4942613	.	+	.	ID=gene-PHA55_RS24065;Name=cbrA;gbkey=Gene;gene=cbrA;gene_biotype=protein_coding;locus_tag=PHA55_RS24065;old_locus_tag=PHA55_24060
NZ_CP116044.1	Protein Homology	CDS	4941549	4942613	.	+	0	ID=cds-WP_001387166.1;Parent=gene-PHA55_RS24065;Dbxref=Genbank:WP_001387166.1;Name=WP_001387166.1;gbkey=CDS;gene=cbrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418145.2;locus_tag=PHA55_RS24065;product=colicin M resistance lipid reductase CbrA;protein_id=WP_001387166.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4942610	4943947	.	-	.	ID=gene-PHA55_RS24070;Name=dgoT;gbkey=Gene;gene=dgoT;gene_biotype=protein_coding;locus_tag=PHA55_RS24070;old_locus_tag=PHA55_24065
NZ_CP116044.1	Protein Homology	CDS	4942610	4943947	.	-	0	ID=cds-WP_000253455.1;Parent=gene-PHA55_RS24070;Dbxref=Genbank:WP_000253455.1;Name=WP_000253455.1;gbkey=CDS;gene=dgoT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709507.1;locus_tag=PHA55_RS24070;product=MFS transporter;protein_id=WP_000253455.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4944022	4945170	.	-	.	ID=gene-PHA55_RS24075;Name=dgoD;gbkey=Gene;gene=dgoD;gene_biotype=protein_coding;locus_tag=PHA55_RS24075;old_locus_tag=PHA55_24070
NZ_CP116044.1	Protein Homology	CDS	4944022	4945170	.	-	0	ID=cds-WP_000705001.1;Parent=gene-PHA55_RS24075;Dbxref=Genbank:WP_000705001.1;Name=WP_000705001.1;Ontology_term=GO:0009063,GO:0008869;gbkey=CDS;gene=dgoD;go_function=galactonate dehydratase activity|0008869||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020077623.1;locus_tag=PHA55_RS24075;product=galactonate dehydratase;protein_id=WP_000705001.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4945167	4945784	.	-	.	ID=gene-PHA55_RS24080;Name=dgoA;gbkey=Gene;gene=dgoA;gene_biotype=protein_coding;locus_tag=PHA55_RS24080;old_locus_tag=PHA55_24075
NZ_CP116044.1	Protein Homology	CDS	4945167	4945784	.	-	0	ID=cds-WP_001198699.1;Parent=gene-PHA55_RS24080;Dbxref=Genbank:WP_001198699.1;Name=WP_001198699.1;gbkey=CDS;gene=dgoA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026238.1;locus_tag=PHA55_RS24080;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=WP_001198699.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4945768	4946646	.	-	.	ID=gene-PHA55_RS24085;Name=dgoK;gbkey=Gene;gene=dgoK;gene_biotype=protein_coding;locus_tag=PHA55_RS24085;old_locus_tag=PHA55_24080
NZ_CP116044.1	Protein Homology	CDS	4945768	4946646	.	-	0	ID=cds-WP_000127112.1;Parent=gene-PHA55_RS24085;Dbxref=Genbank:WP_000127112.1;Name=WP_000127112.1;gbkey=CDS;gene=dgoK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709506.1;locus_tag=PHA55_RS24085;product=2-dehydro-3-deoxygalactonokinase;protein_id=WP_000127112.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4946643	4947332	.	-	.	ID=gene-PHA55_RS24090;Name=dgoR;gbkey=Gene;gene=dgoR;gene_biotype=protein_coding;locus_tag=PHA55_RS24090;old_locus_tag=PHA55_24085
NZ_CP116044.1	Protein Homology	CDS	4946643	4947332	.	-	0	ID=cds-WP_000174305.1;Parent=gene-PHA55_RS24090;Dbxref=Genbank:WP_000174305.1;Name=WP_000174305.1;gbkey=CDS;gene=dgoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709505.1;locus_tag=PHA55_RS24090;product=D-galactonate utilization transcriptional regulator DgoR;protein_id=WP_000174305.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4947610	4948266	.	+	.	ID=gene-PHA55_RS24095;Name=yidX;gbkey=Gene;gene=yidX;gene_biotype=protein_coding;locus_tag=PHA55_RS24095;old_locus_tag=PHA55_24090
NZ_CP116044.1	Protein Homology	CDS	4947610	4948266	.	+	0	ID=cds-WP_000772934.1;Parent=gene-PHA55_RS24095;Dbxref=Genbank:WP_000772934.1;Name=WP_000772934.1;gbkey=CDS;gene=yidX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709504.1;locus_tag=PHA55_RS24095;product=protein YidX;protein_id=WP_000772934.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4948312	4949124	.	-	.	ID=gene-PHA55_RS24100;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=PHA55_RS24100;old_locus_tag=PHA55_24095
NZ_CP116044.1	Protein Homology	CDS	4948312	4949124	.	-	0	ID=cds-WP_000985549.1;Parent=gene-PHA55_RS24100;Dbxref=Genbank:WP_000985549.1;Name=WP_000985549.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418152.1;locus_tag=PHA55_RS24100;product=sugar-phosphatase;protein_id=WP_000985549.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4949239	4949637	.	-	.	ID=gene-PHA55_RS24105;Name=yidB;gbkey=Gene;gene=yidB;gene_biotype=protein_coding;locus_tag=PHA55_RS24105;old_locus_tag=PHA55_24100
NZ_CP116044.1	Protein Homology	CDS	4949239	4949637	.	-	0	ID=cds-WP_000522208.1;Parent=gene-PHA55_RS24105;Dbxref=Genbank:WP_000522208.1;Name=WP_000522208.1;gbkey=CDS;gene=yidB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418153.4;locus_tag=PHA55_RS24105;product=YidB family protein;protein_id=WP_000522208.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4949877	4952291	.	-	.	ID=gene-PHA55_RS24110;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=PHA55_RS24110;old_locus_tag=PHA55_24105
NZ_CP116044.1	Protein Homology	CDS	4949877	4952291	.	-	0	ID=cds-WP_000072067.1;Parent=gene-PHA55_RS24110;Dbxref=Genbank:WP_000072067.1;Name=WP_000072067.1;Ontology_term=GO:0006265,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrB;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=PHA55_RS24110;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_000072067.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4952320	4953393	.	-	.	ID=gene-PHA55_RS24115;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=PHA55_RS24115;old_locus_tag=PHA55_24110
NZ_CP116044.1	Protein Homology	CDS	4952320	4953393	.	-	0	ID=cds-WP_000060118.1;Parent=gene-PHA55_RS24115;Dbxref=Genbank:WP_000060118.1;Name=WP_000060118.1;Ontology_term=GO:0006281,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=PHA55_RS24115;product=DNA replication/repair protein RecF;protein_id=WP_000060118.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4953393	4954493	.	-	.	ID=gene-PHA55_RS24120;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=PHA55_RS24120;old_locus_tag=PHA55_24115
NZ_CP116044.1	Protein Homology	CDS	4953393	4954493	.	-	0	ID=cds-WP_000673464.1;Parent=gene-PHA55_RS24120;Dbxref=Genbank:WP_000673464.1;Name=WP_000673464.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=PHA55_RS24120;product=DNA polymerase III subunit beta;protein_id=WP_000673464.1;transl_table=11
NZ_CP116044.1	RefSeq	gene	4954498	4955901	.	-	.	ID=gene-PHA55_RS24125;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=PHA55_RS24125;old_locus_tag=PHA55_24120
NZ_CP116044.1	Protein Homology	CDS	4954498	4955901	.	-	0	ID=cds-WP_000059111.1;Parent=gene-PHA55_RS24125;Dbxref=Genbank:WP_000059111.1;Name=WP_000059111.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418157.1;locus_tag=PHA55_RS24125;product=chromosomal replication initiator protein DnaA;protein_id=WP_000059111.1;transl_table=11
##sequence-region NZ_CP116045.1 1 88676
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=562
NZ_CP116045.1	RefSeq	region	1	88676	.	+	.	ID=NZ_CP116045.1:1..88676;Dbxref=taxon:562;Is_circular=true;Name=p_STEC1575_1;collected-by=China CDC;collection-date=2021;country=China: Beijing;gbkey=Src;genome=plasmid;isolation-source=patient;mol_type=genomic DNA;nat-host=Homo sapiens;plasmid-name=p_STEC1575_1;strain=STEC1575
NZ_CP116045.1	RefSeq	gene	430	651	.	-	.	ID=gene-PHA55_RS24135;Name=PHA55_RS24135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24135;old_locus_tag=PHA55_24130
NZ_CP116045.1	Protein Homology	CDS	430	651	.	-	0	ID=cds-WP_001104885.1;Parent=gene-PHA55_RS24135;Dbxref=Genbank:WP_001104885.1;Name=WP_001104885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858332.1;locus_tag=PHA55_RS24135;product=hypothetical protein;protein_id=WP_001104885.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	652	1335	.	-	.	ID=gene-PHA55_RS24140;Name=PHA55_RS24140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24140;old_locus_tag=PHA55_24135
NZ_CP116045.1	Protein Homology	CDS	652	1335	.	-	0	ID=cds-WP_032219114.1;Parent=gene-PHA55_RS24140;Dbxref=Genbank:WP_032219114.1;Name=WP_032219114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858331.2;locus_tag=PHA55_RS24140;product=DNA methylase;protein_id=WP_032219114.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	1412	1723	.	-	.	ID=gene-PHA55_RS24145;Name=PHA55_RS24145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24145;old_locus_tag=PHA55_24140
NZ_CP116045.1	Protein Homology	CDS	1412	1723	.	-	0	ID=cds-WP_032219116.1;Parent=gene-PHA55_RS24145;Dbxref=Genbank:WP_032219116.1;Name=WP_032219116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858330.2;locus_tag=PHA55_RS24145;product=hypothetical protein;protein_id=WP_032219116.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	1720	2622	.	-	.	ID=gene-PHA55_RS24150;Name=PHA55_RS24150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24150;old_locus_tag=PHA55_24145
NZ_CP116045.1	Protein Homology	CDS	1720	2622	.	-	0	ID=cds-WP_124062600.1;Parent=gene-PHA55_RS24150;Dbxref=Genbank:WP_124062600.1;Name=WP_124062600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052643.1;locus_tag=PHA55_RS24150;product=DUF1281 domain-containing protein;protein_id=WP_124062600.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	3040	3288	.	+	.	ID=gene-PHA55_RS24155;Name=PHA55_RS24155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24155;old_locus_tag=PHA55_24150
NZ_CP116045.1	Protein Homology	CDS	3040	3288	.	+	0	ID=cds-WP_019842136.1;Parent=gene-PHA55_RS24155;Dbxref=Genbank:WP_019842136.1;Name=WP_019842136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001697964.1;locus_tag=PHA55_RS24155;product=DinI-like family protein;protein_id=WP_019842136.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	3285	3722	.	+	.	ID=gene-PHA55_RS24160;Name=umuD;gbkey=Gene;gene=umuD;gene_biotype=protein_coding;locus_tag=PHA55_RS24160;old_locus_tag=PHA55_24155
NZ_CP116045.1	Protein Homology	CDS	3285	3722	.	+	0	ID=cds-WP_032219119.1;Parent=gene-PHA55_RS24160;Dbxref=Genbank:WP_032219119.1;Name=WP_032219119.1;Ontology_term=GO:0003677;gbkey=CDS;gene=umuD;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536590.1;locus_tag=PHA55_RS24160;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_032219119.1;transl_table=11
NZ_CP116045.1	RefSeq	pseudogene	3722	4992	.	+	.	ID=gene-PHA55_RS24165;Name=umuC;gbkey=Gene;gene=umuC;gene_biotype=pseudogene;locus_tag=PHA55_RS24165;old_locus_tag=PHA55_24160;pseudo=true
NZ_CP116045.1	Protein Homology	CDS	3722	4992	.	+	0	ID=cds-PHA55_RS24165;Parent=gene-PHA55_RS24165;Note=frameshifted;Ontology_term=GO:0006281,GO:0003684;gbkey=CDS;gene=umuC;go_function=damaged DNA binding|0003684||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001766293.1;locus_tag=PHA55_RS24165;product=translesion error-prone DNA polymerase V subunit UmuC;pseudo=true;transl_table=11
NZ_CP116045.1	RefSeq	gene	4997	5389	.	-	.	ID=gene-PHA55_RS24170;Name=PHA55_RS24170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24170;old_locus_tag=PHA55_24165
NZ_CP116045.1	Protein Homology	CDS	4997	5389	.	-	0	ID=cds-WP_000340833.1;Parent=gene-PHA55_RS24170;Dbxref=Genbank:WP_000340833.1;Name=WP_000340833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001555635.1;locus_tag=PHA55_RS24170;product=plasmid partitioning/stability family protein;protein_id=WP_000340833.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	5394	6365	.	-	.	ID=gene-PHA55_RS24175;Name=parM;gbkey=Gene;gene=parM;gene_biotype=protein_coding;locus_tag=PHA55_RS24175;old_locus_tag=PHA55_24170
NZ_CP116045.1	Protein Homology	CDS	5394	6365	.	-	0	ID=cds-WP_001103694.1;Parent=gene-PHA55_RS24175;Dbxref=Genbank:WP_001103694.1;Name=WP_001103694.1;gbkey=CDS;gene=parM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001505082.1;locus_tag=PHA55_RS24175;product=plasmid segregation protein ParM;protein_id=WP_001103694.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	6594	7238	.	+	.	ID=gene-PHA55_RS24180;Name=PHA55_RS24180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24180;old_locus_tag=PHA55_24175
NZ_CP116045.1	Protein Homology	CDS	6594	7238	.	+	0	ID=cds-WP_000633911.1;Parent=gene-PHA55_RS24180;Dbxref=Genbank:WP_000633911.1;Name=WP_000633911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000633910.1;locus_tag=PHA55_RS24180;product=AAA family ATPase;protein_id=WP_000633911.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	7232	7507	.	+	.	ID=gene-PHA55_RS24185;Name=PHA55_RS24185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24185;old_locus_tag=PHA55_24180
NZ_CP116045.1	Protein Homology	CDS	7232	7507	.	+	0	ID=cds-WP_000239529.1;Parent=gene-PHA55_RS24185;Dbxref=Genbank:WP_000239529.1;Name=WP_000239529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000241708.1;locus_tag=PHA55_RS24185;product=hypothetical protein;protein_id=WP_000239529.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	7645	8454	.	-	.	ID=gene-PHA55_RS24190;Name=PHA55_RS24190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24190;old_locus_tag=PHA55_24185
NZ_CP116045.1	Protein Homology	CDS	7645	8454	.	-	0	ID=cds-WP_161619134.1;Parent=gene-PHA55_RS24190;Dbxref=Genbank:WP_161619134.1;Name=WP_161619134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016237314.1;locus_tag=PHA55_RS24190;product=site-specific integrase;protein_id=WP_161619134.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	8455	8760	.	-	.	ID=gene-PHA55_RS24195;Name=ccdB;gbkey=Gene;gene=ccdB;gene_biotype=protein_coding;locus_tag=PHA55_RS24195;old_locus_tag=PHA55_24190
NZ_CP116045.1	Protein Homology	CDS	8455	8760	.	-	0	ID=cds-WP_001159871.1;Parent=gene-PHA55_RS24195;Dbxref=Genbank:WP_001159871.1;Name=WP_001159871.1;gbkey=CDS;gene=ccdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052635.1;locus_tag=PHA55_RS24195;product=type II toxin-antitoxin system toxin CcdB;protein_id=WP_001159871.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	8762	8980	.	-	.	ID=gene-PHA55_RS24200;Name=ccdA;gbkey=Gene;gene=ccdA;gene_biotype=protein_coding;locus_tag=PHA55_RS24200;old_locus_tag=PHA55_24195
NZ_CP116045.1	Protein Homology	CDS	8762	8980	.	-	0	ID=cds-WP_000813634.1;Parent=gene-PHA55_RS24200;Dbxref=Genbank:WP_000813634.1;Name=WP_000813634.1;gbkey=CDS;gene=ccdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052634.1;locus_tag=PHA55_RS24200;product=type II toxin-antitoxin system antitoxin CcdA;protein_id=WP_000813634.1;transl_table=11
NZ_CP116045.1	RefSeq	pseudogene	9935	10138	.	-	.	ID=gene-PHA55_RS24205;Name=PHA55_RS24205;end_range=10138,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS24205;old_locus_tag=PHA55_24205;partial=true;pseudo=true
NZ_CP116045.1	Protein Homology	CDS	9935	10138	.	-	0	ID=cds-PHA55_RS24205;Parent=gene-PHA55_RS24205;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=10138,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012539895.1;locus_tag=PHA55_RS24205;partial=true;product=integrase core domain-containing protein;pseudo=true;transl_table=11
NZ_CP116045.1	RefSeq	gene	11208	11864	.	+	.	ID=gene-PHA55_RS24210;Name=PHA55_RS24210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24210;old_locus_tag=PHA55_24210
NZ_CP116045.1	Protein Homology	CDS	11208	11864	.	+	0	ID=cds-WP_235150763.1;Parent=gene-PHA55_RS24210;Dbxref=Genbank:WP_235150763.1;Name=WP_235150763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001560584.1;locus_tag=PHA55_RS24210;product=PIG-L family deacetylase;protein_id=WP_235150763.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	11875	13071	.	+	.	ID=gene-PHA55_RS24215;Name=PHA55_RS24215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24215;old_locus_tag=PHA55_24215
NZ_CP116045.1	Protein Homology	CDS	11875	13071	.	+	0	ID=cds-WP_161619135.1;Parent=gene-PHA55_RS24215;Dbxref=Genbank:WP_161619135.1;Name=WP_161619135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414897.1;locus_tag=PHA55_RS24215;product=glycosyltransferase family 2 protein;protein_id=WP_161619135.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	13049	13630	.	+	.	ID=gene-PHA55_RS24220;Name=PHA55_RS24220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24220;old_locus_tag=PHA55_24220
NZ_CP116045.1	Protein Homology	CDS	13049	13630	.	+	0	ID=cds-WP_096934554.1;Parent=gene-PHA55_RS24220;Dbxref=Genbank:WP_096934554.1;Name=WP_096934554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012602184.1;locus_tag=PHA55_RS24220;product=acetyltransferase;protein_id=WP_096934554.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	13632	14405	.	+	.	ID=gene-PHA55_RS24225;Name=PHA55_RS24225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24225;old_locus_tag=PHA55_24225
NZ_CP116045.1	Protein Homology	CDS	13632	14405	.	+	0	ID=cds-WP_161619136.1;Parent=gene-PHA55_RS24225;Dbxref=Genbank:WP_161619136.1;Name=WP_161619136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414892.1;locus_tag=PHA55_RS24225;product=YaiO family outer membrane beta-barrel protein;protein_id=WP_161619136.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	15409	15651	.	+	.	ID=gene-PHA55_RS24230;Name=PHA55_RS24230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24230;old_locus_tag=PHA55_24230
NZ_CP116045.1	Protein Homology	CDS	15409	15651	.	+	0	ID=cds-WP_096934556.1;Parent=gene-PHA55_RS24230;Dbxref=Genbank:WP_096934556.1;Name=WP_096934556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244175.1;locus_tag=PHA55_RS24230;product=hypothetical protein;protein_id=WP_096934556.1;transl_table=11
NZ_CP116045.1	RefSeq	pseudogene	15720	16181	.	-	.	ID=gene-PHA55_RS24235;Name=ehxD;end_range=16181,.;gbkey=Gene;gene=ehxD;gene_biotype=pseudogene;locus_tag=PHA55_RS24235;old_locus_tag=PHA55_24235;partial=true;pseudo=true;start_range=.,15720
NZ_CP116045.1	Protein Homology	CDS	15720	16181	.	-	0	ID=cds-PHA55_RS24235;Parent=gene-PHA55_RS24235;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=16181,.;gbkey=CDS;gene=ehxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052626.1;locus_tag=PHA55_RS24235;partial=true;product=enterohemolysin T1SS ABC transporter subunit EhxD;pseudo=true;start_range=.,15720;transl_table=11
NZ_CP116045.1	RefSeq	gene	16477	17472	.	+	.	ID=gene-PHA55_RS24240;Name=PHA55_RS24240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24240;old_locus_tag=PHA55_24240
NZ_CP116045.1	Protein Homology	CDS	16477	17472	.	+	0	ID=cds-WP_000246636.1;Parent=gene-PHA55_RS24240;Dbxref=Genbank:WP_000246636.1;Name=WP_000246636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013578371.1;locus_tag=PHA55_RS24240;product=hypothetical protein;protein_id=WP_000246636.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	17476	18408	.	+	.	ID=gene-PHA55_RS24245;Name=PHA55_RS24245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24245;old_locus_tag=PHA55_24245
NZ_CP116045.1	Protein Homology	CDS	17476	18408	.	+	0	ID=cds-WP_096934558.1;Parent=gene-PHA55_RS24245;Dbxref=Genbank:WP_096934558.1;Name=WP_096934558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001710756.1;locus_tag=PHA55_RS24245;product=S-4TM family putative pore-forming effector;protein_id=WP_096934558.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	18728	18997	.	+	.	ID=gene-PHA55_RS24250;Name=PHA55_RS24250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24250;old_locus_tag=PHA55_24250
NZ_CP116045.1	Protein Homology	CDS	18728	18997	.	+	0	ID=cds-WP_096934559.1;Parent=gene-PHA55_RS24250;Dbxref=Genbank:WP_096934559.1;Name=WP_096934559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001554929.1;locus_tag=PHA55_RS24250;product=hypothetical protein;protein_id=WP_096934559.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	18985	19581	.	+	.	ID=gene-PHA55_RS24255;Name=PHA55_RS24255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24255;old_locus_tag=PHA55_24255
NZ_CP116045.1	Protein Homology	CDS	18985	19581	.	+	0	ID=cds-WP_096934560.1;Parent=gene-PHA55_RS24255;Dbxref=Genbank:WP_096934560.1;Name=WP_096934560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001554928.1;locus_tag=PHA55_RS24255;product=hypothetical protein;protein_id=WP_096934560.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	20362	21339	.	+	.	ID=gene-PHA55_RS24260;Name=PHA55_RS24260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24260;old_locus_tag=PHA55_24260
NZ_CP116045.1	Protein Homology	CDS	20362	21339	.	+	0	ID=cds-WP_000361610.1;Parent=gene-PHA55_RS24260;Dbxref=Genbank:WP_000361610.1;Name=WP_000361610.1;Ontology_term=GO:0006270,GO:0003887;gbkey=CDS;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052630.2;locus_tag=PHA55_RS24260;product=RepB family plasmid replication initiator protein;protein_id=WP_000361610.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	21624	22364	.	-	.	ID=gene-PHA55_RS24265;Name=PHA55_RS24265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24265;old_locus_tag=PHA55_24265
NZ_CP116045.1	Protein Homology	CDS	21624	22364	.	-	0	ID=cds-WP_001066941.1;Parent=gene-PHA55_RS24265;Dbxref=Genbank:WP_001066941.1;Name=WP_001066941.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052628.1;locus_tag=PHA55_RS24265;product=tyrosine-type recombinase/integrase;protein_id=WP_001066941.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	22485	22655	.	-	.	ID=gene-PHA55_RS24270;Name=PHA55_RS24270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24270;old_locus_tag=PHA55_24270
NZ_CP116045.1	Protein Homology	CDS	22485	22655	.	-	0	ID=cds-WP_271287557.1;Parent=gene-PHA55_RS24270;Dbxref=Genbank:WP_271287557.1;Name=WP_271287557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001325179.1;locus_tag=PHA55_RS24270;product=transcriptional regulator;protein_id=WP_271287557.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	23092	24306	.	-	.	ID=gene-PHA55_RS24275;Name=PHA55_RS24275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24275;old_locus_tag=PHA55_24275
NZ_CP116045.1	Protein Homology	CDS	23092	24306	.	-	0	ID=cds-WP_271287555.1;Parent=gene-PHA55_RS24275;Dbxref=Genbank:WP_271287555.1;Name=WP_271287555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892530.1;locus_tag=PHA55_RS24275;product=alpha/beta hydrolase;protein_id=WP_271287555.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	24348	25045	.	+	.	ID=gene-PHA55_RS24280;Name=PHA55_RS24280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24280;old_locus_tag=PHA55_24280
NZ_CP116045.1	Protein Homology	CDS	24348	24597	.	+	0	ID=cds-WP_223369285.1;Parent=gene-PHA55_RS24280;Dbxref=Genbank:WP_223369285.1;Name=WP_223369285.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=PHA55_RS24280;product=IS1-like element IS1A family transposase;protein_id=WP_223369285.1;transl_table=11
NZ_CP116045.1	Protein Homology	CDS	24597	25045	.	+	2	ID=cds-WP_223369285.1;Parent=gene-PHA55_RS24280;Dbxref=Genbank:WP_223369285.1;Name=WP_223369285.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=PHA55_RS24280;product=IS1-like element IS1A family transposase;protein_id=WP_223369285.1;transl_table=11
NZ_CP116045.1	RefSeq	pseudogene	25115	25936	.	+	.	ID=gene-PHA55_RS24285;Name=PHA55_RS24285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS24285;old_locus_tag=PHA55_24285;partial=true;pseudo=true;start_range=.,25115
NZ_CP116045.1	Protein Homology	CDS	25115	25936	.	+	0	ID=cds-PHA55_RS24285;Parent=gene-PHA55_RS24285;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001297906.1;locus_tag=PHA55_RS24285;partial=true;product=transposase;pseudo=true;start_range=.,25115;transl_table=11
NZ_CP116045.1	RefSeq	gene	25921	26223	.	-	.	ID=gene-PHA55_RS24290;Name=PHA55_RS24290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24290;old_locus_tag=PHA55_24290
NZ_CP116045.1	Protein Homology	CDS	25921	26223	.	-	0	ID=cds-WP_271287556.1;Parent=gene-PHA55_RS24290;Dbxref=Genbank:WP_271287556.1;Name=WP_271287556.1;Ontology_term=GO:0006508,GO:0004175,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=endopeptidase activity|0004175||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF013446.2;locus_tag=PHA55_RS24290;product=omptin family outer membrane protease;protein_id=WP_271287556.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	26554	27489	.	-	.	ID=gene-PHA55_RS24295;Name=PHA55_RS24295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24295;old_locus_tag=PHA55_24295
NZ_CP116045.1	GeneMarkS-2+	CDS	26554	27489	.	-	0	ID=cds-WP_161619138.1;Parent=gene-PHA55_RS24295;Dbxref=Genbank:WP_161619138.1;Name=WP_161619138.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA55_RS24295;product=hypothetical protein;protein_id=WP_161619138.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	27501	28010	.	-	.	ID=gene-PHA55_RS24300;Name=PHA55_RS24300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24300;old_locus_tag=PHA55_24300
NZ_CP116045.1	GeneMarkS-2+	CDS	27501	28010	.	-	0	ID=cds-WP_161619139.1;Parent=gene-PHA55_RS24300;Dbxref=Genbank:WP_161619139.1;Name=WP_161619139.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA55_RS24300;product=hypothetical protein;protein_id=WP_161619139.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	27997	28689	.	-	.	ID=gene-PHA55_RS24305;Name=PHA55_RS24305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24305;old_locus_tag=PHA55_24305
NZ_CP116045.1	Protein Homology	CDS	27997	28689	.	-	0	ID=cds-WP_033812880.1;Parent=gene-PHA55_RS24305;Dbxref=Genbank:WP_033812880.1;Name=WP_033812880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550527.1;locus_tag=PHA55_RS24305;product=fimbrial chaperone;protein_id=WP_033812880.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	28682	31096	.	-	.	ID=gene-PHA55_RS24310;Name=pefC;gbkey=Gene;gene=pefC;gene_biotype=protein_coding;locus_tag=PHA55_RS24310;old_locus_tag=PHA55_24310
NZ_CP116045.1	Protein Homology	CDS	28682	31096	.	-	0	ID=cds-WP_161619140.1;Parent=gene-PHA55_RS24310;Dbxref=Genbank:WP_161619140.1;Name=WP_161619140.1;gbkey=CDS;gene=pefC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000747724.1;locus_tag=PHA55_RS24310;product=PefC/AfrB family outer membrane usher protein;protein_id=WP_161619140.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	31211	31726	.	-	.	ID=gene-PHA55_RS24315;Name=PHA55_RS24315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24315;old_locus_tag=PHA55_24315
NZ_CP116045.1	Protein Homology	CDS	31211	31726	.	-	0	ID=cds-WP_161619141.1;Parent=gene-PHA55_RS24315;Dbxref=Genbank:WP_161619141.1;Name=WP_161619141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542550.1;locus_tag=PHA55_RS24315;product=fimbrial protein;protein_id=WP_161619141.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	31865	32134	.	-	.	ID=gene-PHA55_RS24320;Name=PHA55_RS24320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24320;old_locus_tag=PHA55_24320
NZ_CP116045.1	Protein Homology	CDS	31865	32134	.	-	0	ID=cds-WP_161619142.1;Parent=gene-PHA55_RS24320;Dbxref=Genbank:WP_161619142.1;Name=WP_161619142.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF015301.2;locus_tag=PHA55_RS24320;product=PapB/FocB family fimbrial expression transcriptional regulator;protein_id=WP_161619142.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	32392	33264	.	-	.	ID=gene-PHA55_RS24325;Name=PHA55_RS24325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24325;old_locus_tag=PHA55_24325
NZ_CP116045.1	Protein Homology	CDS	32392	33264	.	-	0	ID=cds-WP_161619143.1;Parent=gene-PHA55_RS24325;Dbxref=Genbank:WP_161619143.1;Name=WP_161619143.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024242.2;locus_tag=PHA55_RS24325;product=helix-turn-helix domain-containing protein;protein_id=WP_161619143.1;transl_table=11
NZ_CP116045.1	RefSeq	pseudogene	34095	34843	.	+	.	ID=gene-PHA55_RS24330;Name=PHA55_RS24330;end_range=34843,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS24330;old_locus_tag=PHA55_24330;partial=true;pseudo=true
NZ_CP116045.1	Protein Homology	CDS	34095	34843	.	+	0	ID=cds-PHA55_RS24330;Parent=gene-PHA55_RS24330;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=34843,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=PHA55_RS24330;partial=true;product=IS3-like element IS3 family transposase;pseudo=true;transl_table=11
NZ_CP116045.1	RefSeq	gene	34926	35948	.	+	.	ID=gene-PHA55_RS24335;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=PHA55_RS24335;old_locus_tag=PHA55_24335
NZ_CP116045.1	Protein Homology	CDS	34926	35948	.	+	0	ID=cds-WP_000255944.1;Parent=gene-PHA55_RS24335;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;gene=istA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=PHA55_RS24335;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	35945	36727	.	+	.	ID=gene-PHA55_RS24340;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=PHA55_RS24340;old_locus_tag=PHA55_24340
NZ_CP116045.1	Protein Homology	CDS	35945	36727	.	+	0	ID=cds-WP_001300609.1;Parent=gene-PHA55_RS24340;Dbxref=Genbank:WP_001300609.1;Name=WP_001300609.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=PHA55_RS24340;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001300609.1;transl_table=11
NZ_CP116045.1	RefSeq	pseudogene	36794	37216	.	+	.	ID=gene-PHA55_RS24345;Name=PHA55_RS24345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS24345;old_locus_tag=PHA55_24345;partial=true;pseudo=true;start_range=.,36794
NZ_CP116045.1	Protein Homology	CDS	36794	37216	.	+	0	ID=cds-PHA55_RS24345;Parent=gene-PHA55_RS24345;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=PHA55_RS24345;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,36794;transl_table=11
NZ_CP116045.1	RefSeq	pseudogene	37388	37480	.	-	.	ID=gene-PHA55_RS24350;Name=PHA55_RS24350;end_range=37480,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS24350;old_locus_tag=PHA55_24350;partial=true;pseudo=true;start_range=.,37388
NZ_CP116045.1	Protein Homology	CDS	37388	37480	.	-	0	ID=cds-PHA55_RS24350;Parent=gene-PHA55_RS24350;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=37480,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080164.1;locus_tag=PHA55_RS24350;partial=true;product=hypothetical protein;pseudo=true;start_range=.,37388;transl_table=11
NZ_CP116045.1	RefSeq	gene	37479	38606	.	-	.	ID=gene-PHA55_RS24355;Name=PHA55_RS24355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24355;old_locus_tag=PHA55_24355
NZ_CP116045.1	Protein Homology	CDS	37479	38606	.	-	0	ID=cds-WP_249544656.1;Parent=gene-PHA55_RS24355;Dbxref=Genbank:WP_249544656.1;Name=WP_249544656.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017519.2;locus_tag=PHA55_RS24355;product=YiiX/YebB-like N1pC/P60 family cysteine hydrolase;protein_id=WP_249544656.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	38915	39193	.	-	.	ID=gene-PHA55_RS24360;Name=yacB;gbkey=Gene;gene=yacB;gene_biotype=protein_coding;locus_tag=PHA55_RS24360;old_locus_tag=PHA55_24360
NZ_CP116045.1	Protein Homology	CDS	38915	39193	.	-	0	ID=cds-WP_001384452.1;Parent=gene-PHA55_RS24360;Dbxref=Genbank:WP_001384452.1;Name=WP_001384452.1;gbkey=CDS;gene=yacB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013009346.1;locus_tag=PHA55_RS24360;product=type II toxin-antitoxin system toxin YacB;protein_id=WP_001384452.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	39193	39462	.	-	.	ID=gene-PHA55_RS24365;Name=yacA;gbkey=Gene;gene=yacA;gene_biotype=protein_coding;locus_tag=PHA55_RS24365;old_locus_tag=PHA55_24365
NZ_CP116045.1	Protein Homology	CDS	39193	39462	.	-	0	ID=cds-WP_000079928.1;Parent=gene-PHA55_RS24365;Dbxref=Genbank:WP_000079928.1;Name=WP_000079928.1;gbkey=CDS;gene=yacA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015056448.1;locus_tag=PHA55_RS24365;product=type II toxin-antitoxin system antitoxin YacA;protein_id=WP_000079928.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	40376	41233	.	-	.	ID=gene-PHA55_RS24370;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=PHA55_RS24370;old_locus_tag=PHA55_24370
NZ_CP116045.1	Protein Homology	CDS	40376	41233	.	-	0	ID=cds-WP_001401515.1;Parent=gene-PHA55_RS24370;Dbxref=Genbank:WP_001401515.1;Name=WP_001401515.1;Ontology_term=GO:0006276;gbkey=CDS;gene=repA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052675.1;locus_tag=PHA55_RS24370;product=incFII family plasmid replication initiator RepA;protein_id=WP_001401515.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	41226	41300	.	-	.	ID=gene-PHA55_RS24375;Name=tap;gbkey=Gene;gene=tap;gene_biotype=protein_coding;locus_tag=PHA55_RS24375;old_locus_tag=PHA55_24375
NZ_CP116045.1	Protein Homology	CDS	41226	41300	.	-	0	ID=cds-WP_001375168.1;Parent=gene-PHA55_RS24375;Dbxref=Genbank:WP_001375168.1;Name=WP_001375168.1;Ontology_term=GO:0006276,GO:0003674;gbkey=CDS;gene=tap;go_function=molecular_function|0003674||IEA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: protein motif:HMM:TIGR03475.1;locus_tag=PHA55_RS24375;product=RepA leader peptide Tap;protein_id=WP_001375168.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	41534	41791	.	-	.	ID=gene-PHA55_RS24380;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=PHA55_RS24380;old_locus_tag=PHA55_24380
NZ_CP116045.1	Protein Homology	CDS	41534	41791	.	-	0	ID=cds-WP_000083826.1;Parent=gene-PHA55_RS24380;Dbxref=Genbank:WP_000083826.1;Name=WP_000083826.1;gbkey=CDS;gene=repA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083822.1;locus_tag=PHA55_RS24380;product=replication regulatory protein RepA;protein_id=WP_000083826.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	42031	42621	.	-	.	ID=gene-PHA55_RS24385;Name=PHA55_RS24385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24385;old_locus_tag=PHA55_24385
NZ_CP116045.1	Protein Homology	CDS	42031	42621	.	-	0	ID=cds-WP_032082916.1;Parent=gene-PHA55_RS24385;Dbxref=Genbank:WP_032082916.1;Name=WP_032082916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858390.1;locus_tag=PHA55_RS24385;product=DUF2726 domain-containing protein;protein_id=WP_032082916.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	42659	42868	.	-	.	ID=gene-PHA55_RS24390;Name=hha;gbkey=Gene;gene=hha;gene_biotype=protein_coding;locus_tag=PHA55_RS24390;old_locus_tag=PHA55_24390
NZ_CP116045.1	Protein Homology	CDS	42659	42868	.	-	0	ID=cds-WP_001302200.1;Parent=gene-PHA55_RS24390;Dbxref=Genbank:WP_001302200.1;Name=WP_001302200.1;gbkey=CDS;gene=hha;inference=COORDINATES: similar to AA sequence:RefSeq:NP_958726.1;locus_tag=PHA55_RS24390;product=hemolysin expression modulator Hha;protein_id=WP_001302200.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	42914	43375	.	-	.	ID=gene-PHA55_RS24395;Name=PHA55_RS24395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24395;old_locus_tag=PHA55_24395
NZ_CP116045.1	Protein Homology	CDS	42914	43375	.	-	0	ID=cds-WP_021545193.1;Parent=gene-PHA55_RS24395;Dbxref=Genbank:WP_021545193.1;Name=WP_021545193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052672.1;locus_tag=PHA55_RS24395;product=thermonuclease family protein;protein_id=WP_021545193.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	43674	43832	.	-	.	ID=gene-PHA55_RS24400;Name=PHA55_RS24400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24400;old_locus_tag=PHA55_24400
NZ_CP116045.1	Protein Homology	CDS	43674	43832	.	-	0	ID=cds-WP_021545194.1;Parent=gene-PHA55_RS24400;Dbxref=Genbank:WP_021545194.1;Name=WP_021545194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_958725.1;locus_tag=PHA55_RS24400;product=hypothetical protein;protein_id=WP_021545194.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	43964	44524	.	-	.	ID=gene-PHA55_RS24405;Name=PHA55_RS24405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24405;old_locus_tag=PHA55_24405
NZ_CP116045.1	Protein Homology	CDS	43964	44524	.	-	0	ID=cds-WP_000840464.1;Parent=gene-PHA55_RS24405;Dbxref=Genbank:WP_000840464.1;Name=WP_000840464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052671.1;locus_tag=PHA55_RS24405;product=fertility inhibition protein FinO;protein_id=WP_000840464.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	44627	45487	.	-	.	ID=gene-PHA55_RS24410;Name=PHA55_RS24410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24410;old_locus_tag=PHA55_24410
NZ_CP116045.1	Protein Homology	CDS	44627	45487	.	-	0	ID=cds-WP_161619125.1;Parent=gene-PHA55_RS24410;Dbxref=Genbank:WP_161619125.1;Name=WP_161619125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052670.1;locus_tag=PHA55_RS24410;product=alpha/beta hydrolase;protein_id=WP_161619125.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	45546	46286	.	-	.	ID=gene-PHA55_RS24415;Name=traX;gbkey=Gene;gene=traX;gene_biotype=protein_coding;locus_tag=PHA55_RS24415;old_locus_tag=PHA55_24415
NZ_CP116045.1	Protein Homology	CDS	45546	46286	.	-	0	ID=cds-WP_161619126.1;Parent=gene-PHA55_RS24415;Dbxref=Genbank:WP_161619126.1;Name=WP_161619126.1;gbkey=CDS;gene=traX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052669.1;locus_tag=PHA55_RS24415;product=conjugal transfer pilus acetylase TraX;protein_id=WP_161619126.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	46306	51576	.	-	.	ID=gene-PHA55_RS24420;Name=traI;gbkey=Gene;gene=traI;gene_biotype=protein_coding;locus_tag=PHA55_RS24420;old_locus_tag=PHA55_24420
NZ_CP116045.1	Protein Homology	CDS	46306	51576	.	-	0	ID=cds-WP_161619127.1;Parent=gene-PHA55_RS24420;Dbxref=Genbank:WP_161619127.1;Name=WP_161619127.1;Ontology_term=GO:0003678;gbkey=CDS;gene=traI;go_function=DNA helicase activity|0003678||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490592.1;locus_tag=PHA55_RS24420;product=conjugative transfer relaxase/helicase TraI;protein_id=WP_161619127.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	51658	51885	.	+	.	ID=gene-PHA55_RS24425;Name=vapB;gbkey=Gene;gene=vapB;gene_biotype=protein_coding;locus_tag=PHA55_RS24425;old_locus_tag=PHA55_24425
NZ_CP116045.1	Protein Homology	CDS	51658	51885	.	+	0	ID=cds-WP_000450532.1;Parent=gene-PHA55_RS24425;Dbxref=Genbank:WP_000450532.1;Name=WP_000450532.1;gbkey=CDS;gene=vapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858379.1;locus_tag=PHA55_RS24425;product=toxin-antitoxin system antitoxin VapB;protein_id=WP_000450532.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	51885	52283	.	+	.	ID=gene-PHA55_RS24430;Name=PHA55_RS24430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24430;old_locus_tag=PHA55_24430
NZ_CP116045.1	Protein Homology	CDS	51885	52283	.	+	0	ID=cds-WP_000911315.1;Parent=gene-PHA55_RS24430;Dbxref=Genbank:WP_000911315.1;Name=WP_000911315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858378.1;locus_tag=PHA55_RS24430;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_000911315.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	52292	54445	.	-	.	ID=gene-PHA55_RS24435;Name=traD;gbkey=Gene;gene=traD;gene_biotype=protein_coding;locus_tag=PHA55_RS24435;old_locus_tag=PHA55_24435
NZ_CP116045.1	Protein Homology	CDS	52292	54445	.	-	0	ID=cds-WP_161619128.1;Parent=gene-PHA55_RS24435;Dbxref=Genbank:WP_161619128.1;Name=WP_161619128.1;gbkey=CDS;gene=traD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001589353.1;locus_tag=PHA55_RS24435;product=type IV conjugative transfer system coupling protein TraD;protein_id=WP_161619128.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	54698	55429	.	-	.	ID=gene-PHA55_RS24440;Name=PHA55_RS24440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24440;old_locus_tag=PHA55_24440
NZ_CP116045.1	Protein Homology	CDS	54698	55429	.	-	0	ID=cds-WP_000850422.1;Parent=gene-PHA55_RS24440;Dbxref=Genbank:WP_000850422.1;Name=WP_000850422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490587.1;locus_tag=PHA55_RS24440;product=complement resistance protein TraT;protein_id=WP_000850422.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	55454	55975	.	-	.	ID=gene-PHA55_RS24445;Name=traS;gbkey=Gene;gene=traS;gene_biotype=protein_coding;locus_tag=PHA55_RS24445;old_locus_tag=PHA55_24445
NZ_CP116045.1	Protein Homology	CDS	55454	55975	.	-	0	ID=cds-WP_000632670.1;Parent=gene-PHA55_RS24445;Dbxref=Genbank:WP_000632670.1;Name=WP_000632670.1;Note=TraS%2C as the term is used in F-like plasmids%2C is a plasmid entry exclusion protein. It interacts with the F-like plasmid mating stabilization protein TraG.;gbkey=CDS;gene=traS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000632670.1;locus_tag=PHA55_RS24445;product=conjugal transfer entry exclusion protein TraS;protein_id=WP_000632670.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	56008	58824	.	-	.	ID=gene-PHA55_RS24450;Name=traG;gbkey=Gene;gene=traG;gene_biotype=protein_coding;locus_tag=PHA55_RS24450;old_locus_tag=PHA55_24450
NZ_CP116045.1	Protein Homology	CDS	56008	58824	.	-	0	ID=cds-WP_161619129.1;Parent=gene-PHA55_RS24450;Dbxref=Genbank:WP_161619129.1;Name=WP_161619129.1;gbkey=CDS;gene=traG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001733890.1;locus_tag=PHA55_RS24450;product=conjugal transfer mating pair stabilization protein TraG;protein_id=WP_161619129.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	58821	60194	.	-	.	ID=gene-PHA55_RS24455;Name=PHA55_RS24455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24455;old_locus_tag=PHA55_24455
NZ_CP116045.1	Protein Homology	CDS	58821	60194	.	-	0	ID=cds-WP_172949700.1;Parent=gene-PHA55_RS24455;Dbxref=Genbank:WP_172949700.1;Name=WP_172949700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001137359.1;locus_tag=PHA55_RS24455;product=conjugal transfer protein TraH;protein_id=WP_172949700.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	60194	60574	.	-	.	ID=gene-PHA55_RS24460;Name=PHA55_RS24460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24460;old_locus_tag=PHA55_24460
NZ_CP116045.1	Protein Homology	CDS	60194	60574	.	-	0	ID=cds-WP_244592005.1;Parent=gene-PHA55_RS24460;Dbxref=Genbank:WP_244592005.1;Name=WP_244592005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001389370.1;locus_tag=PHA55_RS24460;product=F-type conjugal transfer protein TrbF;protein_id=WP_244592005.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	60561	60902	.	-	.	ID=gene-PHA55_RS24465;Name=trbJ;gbkey=Gene;gene=trbJ;gene_biotype=protein_coding;locus_tag=PHA55_RS24465;old_locus_tag=PHA55_24465
NZ_CP116045.1	Protein Homology	CDS	60561	60902	.	-	0	ID=cds-WP_161619130.1;Parent=gene-PHA55_RS24465;Dbxref=Genbank:WP_161619130.1;Name=WP_161619130.1;gbkey=CDS;gene=trbJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477176.1;locus_tag=PHA55_RS24465;product=P-type conjugative transfer protein TrbJ;protein_id=WP_161619130.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	60832	61377	.	-	.	ID=gene-PHA55_RS24470;Name=trbB;gbkey=Gene;gene=trbB;gene_biotype=protein_coding;locus_tag=PHA55_RS24470;old_locus_tag=PHA55_24470
NZ_CP116045.1	Protein Homology	CDS	60832	61377	.	-	0	ID=cds-WP_161619131.1;Parent=gene-PHA55_RS24470;Dbxref=Genbank:WP_161619131.1;Name=WP_161619131.1;gbkey=CDS;gene=trbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000059814.1;locus_tag=PHA55_RS24470;product=type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB;protein_id=WP_161619131.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	61364	61648	.	-	.	ID=gene-PHA55_RS24475;Name=traQ;gbkey=Gene;gene=traQ;gene_biotype=protein_coding;locus_tag=PHA55_RS24475;old_locus_tag=PHA55_24475
NZ_CP116045.1	Protein Homology	CDS	61364	61648	.	-	0	ID=cds-WP_161619132.1;Parent=gene-PHA55_RS24475;Dbxref=Genbank:WP_161619132.1;Name=WP_161619132.1;gbkey=CDS;gene=traQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001617873.1;locus_tag=PHA55_RS24475;product=type-F conjugative transfer system pilin chaperone TraQ;protein_id=WP_161619132.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	61729	61914	.	+	.	ID=gene-PHA55_RS24480;Name=PHA55_RS24480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24480;old_locus_tag=PHA55_24480
NZ_CP116045.1	GeneMarkS-2+	CDS	61729	61914	.	+	0	ID=cds-WP_250696885.1;Parent=gene-PHA55_RS24480;Dbxref=Genbank:WP_250696885.1;Name=WP_250696885.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA55_RS24480;product=toxin ArtA;protein_id=WP_250696885.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	62045	62392	.	-	.	ID=gene-PHA55_RS24485;Name=trbA;gbkey=Gene;gene=trbA;gene_biotype=protein_coding;locus_tag=PHA55_RS24485;old_locus_tag=PHA55_24485
NZ_CP116045.1	Protein Homology	CDS	62045	62392	.	-	0	ID=cds-WP_001287910.1;Parent=gene-PHA55_RS24485;Dbxref=Genbank:WP_001287910.1;Name=WP_001287910.1;gbkey=CDS;gene=trbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001287890.1;locus_tag=PHA55_RS24485;product=conjugal transfer protein TrbA;protein_id=WP_001287910.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	62408	63151	.	-	.	ID=gene-PHA55_RS24490;Name=traF;gbkey=Gene;gene=traF;gene_biotype=protein_coding;locus_tag=PHA55_RS24490;old_locus_tag=PHA55_24490
NZ_CP116045.1	Protein Homology	CDS	62408	63151	.	-	0	ID=cds-WP_001030378.1;Parent=gene-PHA55_RS24490;Dbxref=Genbank:WP_001030378.1;Name=WP_001030378.1;gbkey=CDS;gene=traF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001030376.1;locus_tag=PHA55_RS24490;product=type-F conjugative transfer system pilin assembly protein TraF;protein_id=WP_001030378.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	63144	63401	.	-	.	ID=gene-PHA55_RS24495;Name=PHA55_RS24495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24495;old_locus_tag=PHA55_24495
NZ_CP116045.1	Protein Homology	CDS	63144	63401	.	-	0	ID=cds-WP_000864318.1;Parent=gene-PHA55_RS24495;Dbxref=Genbank:WP_000864318.1;Name=WP_000864318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000864342.1;locus_tag=PHA55_RS24495;product=conjugal transfer protein TrbE;protein_id=WP_000864318.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	63428	65236	.	-	.	ID=gene-PHA55_RS24500;Name=traN;gbkey=Gene;gene=traN;gene_biotype=protein_coding;locus_tag=PHA55_RS24500;old_locus_tag=PHA55_24500
NZ_CP116045.1	Protein Homology	CDS	63428	65236	.	-	0	ID=cds-WP_097710798.1;Parent=gene-PHA55_RS24500;Dbxref=Genbank:WP_097710798.1;Name=WP_097710798.1;gbkey=CDS;gene=traN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001756807.1;locus_tag=PHA55_RS24500;product=type-F conjugative transfer system mating-pair stabilization protein TraN;protein_id=WP_097710798.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	65233	65871	.	-	.	ID=gene-PHA55_RS24505;Name=trbC;gbkey=Gene;gene=trbC;gene_biotype=protein_coding;locus_tag=PHA55_RS24505;old_locus_tag=PHA55_24505
NZ_CP116045.1	Protein Homology	CDS	65233	65871	.	-	0	ID=cds-WP_000777695.1;Parent=gene-PHA55_RS24505;Dbxref=Genbank:WP_000777695.1;Name=WP_000777695.1;gbkey=CDS;gene=trbC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001553832.1;locus_tag=PHA55_RS24505;product=type-F conjugative transfer system pilin assembly protein TrbC;protein_id=WP_000777695.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	65880	66872	.	-	.	ID=gene-PHA55_RS24510;Name=PHA55_RS24510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24510;old_locus_tag=PHA55_24510
NZ_CP116045.1	Protein Homology	CDS	65880	66872	.	-	0	ID=cds-WP_000830183.1;Parent=gene-PHA55_RS24510;Dbxref=Genbank:WP_000830183.1;Name=WP_000830183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490576.1;locus_tag=PHA55_RS24510;product=conjugal transfer pilus assembly protein TraU;protein_id=WP_000830183.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	66869	67501	.	-	.	ID=gene-PHA55_RS24515;Name=traW;gbkey=Gene;gene=traW;gene_biotype=protein_coding;locus_tag=PHA55_RS24515;old_locus_tag=PHA55_24515
NZ_CP116045.1	Protein Homology	CDS	66869	67501	.	-	0	ID=cds-WP_001203720.1;Parent=gene-PHA55_RS24515;Dbxref=Genbank:WP_001203720.1;Name=WP_001203720.1;gbkey=CDS;gene=traW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490575.1;locus_tag=PHA55_RS24515;product=type-F conjugative transfer system protein TraW;protein_id=WP_001203720.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	67498	67884	.	-	.	ID=gene-PHA55_RS24520;Name=trbI;gbkey=Gene;gene=trbI;gene_biotype=protein_coding;locus_tag=PHA55_RS24520;old_locus_tag=PHA55_24520
NZ_CP116045.1	Protein Homology	CDS	67498	67884	.	-	0	ID=cds-WP_000099690.1;Parent=gene-PHA55_RS24520;Dbxref=Genbank:WP_000099690.1;Name=WP_000099690.1;gbkey=CDS;gene=trbI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490574.1;locus_tag=PHA55_RS24520;product=type-F conjugative transfer system protein TrbI;protein_id=WP_000099690.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	67881	70508	.	-	.	ID=gene-PHA55_RS24525;Name=traC;gbkey=Gene;gene=traC;gene_biotype=protein_coding;locus_tag=PHA55_RS24525;old_locus_tag=PHA55_24525
NZ_CP116045.1	Protein Homology	CDS	67881	70508	.	-	0	ID=cds-WP_001064245.1;Parent=gene-PHA55_RS24525;Dbxref=Genbank:WP_001064245.1;Name=WP_001064245.1;gbkey=CDS;gene=traC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001064255.1;locus_tag=PHA55_RS24525;product=type IV secretion system protein TraC;protein_id=WP_001064245.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	70668	70889	.	-	.	ID=gene-PHA55_RS24530;Name=traR;gbkey=Gene;gene=traR;gene_biotype=protein_coding;locus_tag=PHA55_RS24530;old_locus_tag=PHA55_24530
NZ_CP116045.1	Protein Homology	CDS	70668	70889	.	-	0	ID=cds-WP_001278689.1;Parent=gene-PHA55_RS24530;Dbxref=Genbank:WP_001278689.1;Name=WP_001278689.1;gbkey=CDS;gene=traR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490571.1;locus_tag=PHA55_RS24530;product=conjugal transfer protein TraR;protein_id=WP_001278689.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	71024	71539	.	-	.	ID=gene-PHA55_RS24535;Name=traV;gbkey=Gene;gene=traV;gene_biotype=protein_coding;locus_tag=PHA55_RS24535;old_locus_tag=PHA55_24535
NZ_CP116045.1	Protein Homology	CDS	71024	71539	.	-	0	ID=cds-WP_000809838.1;Parent=gene-PHA55_RS24535;Dbxref=Genbank:WP_000809838.1;Name=WP_000809838.1;gbkey=CDS;gene=traV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233168.1;locus_tag=PHA55_RS24535;product=type IV conjugative transfer system lipoprotein TraV;protein_id=WP_000809838.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	71536	71787	.	-	.	ID=gene-PHA55_RS24540;Name=trbG;gbkey=Gene;gene=trbG;gene_biotype=protein_coding;locus_tag=PHA55_RS24540;old_locus_tag=PHA55_24540
NZ_CP116045.1	Protein Homology	CDS	71536	71787	.	-	0	ID=cds-WP_001038342.1;Parent=gene-PHA55_RS24540;Dbxref=Genbank:WP_001038342.1;Name=WP_001038342.1;gbkey=CDS;gene=trbG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001038337.1;locus_tag=PHA55_RS24540;product=conjugal transfer protein TrbG;protein_id=WP_001038342.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	71780	72100	.	-	.	ID=gene-PHA55_RS24545;Name=PHA55_RS24545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24545;old_locus_tag=PHA55_24545
NZ_CP116045.1	Protein Homology	CDS	71780	72100	.	-	0	ID=cds-WP_001057286.1;Parent=gene-PHA55_RS24545;Dbxref=Genbank:WP_001057286.1;Name=WP_001057286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001377845.1;locus_tag=PHA55_RS24545;product=conjugal transfer protein TrbD;protein_id=WP_001057286.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	72087	72677	.	-	.	ID=gene-PHA55_RS24550;Name=PHA55_RS24550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24550;old_locus_tag=PHA55_24550
NZ_CP116045.1	Protein Homology	CDS	72087	72677	.	-	0	ID=cds-WP_000002787.1;Parent=gene-PHA55_RS24550;Dbxref=Genbank:WP_000002787.1;Name=WP_000002787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528624.1;locus_tag=PHA55_RS24550;product=conjugal transfer protein TraP;protein_id=WP_000002787.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	72667	74094	.	-	.	ID=gene-PHA55_RS24555;Name=PHA55_RS24555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24555;old_locus_tag=PHA55_24555
NZ_CP116045.1	Protein Homology	CDS	72667	74094	.	-	0	ID=cds-WP_000146685.1;Parent=gene-PHA55_RS24555;Dbxref=Genbank:WP_000146685.1;Name=WP_000146685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001553749.1;locus_tag=PHA55_RS24555;product=conjugal transfer protein TraB;protein_id=WP_000146685.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	74094	74822	.	-	.	ID=gene-PHA55_RS24560;Name=traK;gbkey=Gene;gene=traK;gene_biotype=protein_coding;locus_tag=PHA55_RS24560;old_locus_tag=PHA55_24560
NZ_CP116045.1	Protein Homology	CDS	74094	74822	.	-	0	ID=cds-WP_001230787.1;Parent=gene-PHA55_RS24560;Dbxref=Genbank:WP_001230787.1;Name=WP_001230787.1;gbkey=CDS;gene=traK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001230803.1;locus_tag=PHA55_RS24560;product=type-F conjugative transfer system secretin TraK;protein_id=WP_001230787.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	74809	75375	.	-	.	ID=gene-PHA55_RS24565;Name=traE;gbkey=Gene;gene=traE;gene_biotype=protein_coding;locus_tag=PHA55_RS24565;old_locus_tag=PHA55_24565
NZ_CP116045.1	Protein Homology	CDS	74809	75375	.	-	0	ID=cds-WP_000399792.1;Parent=gene-PHA55_RS24565;Dbxref=Genbank:WP_000399792.1;Name=WP_000399792.1;gbkey=CDS;gene=traE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490565.1;locus_tag=PHA55_RS24565;product=type IV conjugative transfer system protein TraE;protein_id=WP_000399792.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	75397	75708	.	-	.	ID=gene-PHA55_RS24570;Name=traL;gbkey=Gene;gene=traL;gene_biotype=protein_coding;locus_tag=PHA55_RS24570;old_locus_tag=PHA55_24570
NZ_CP116045.1	Protein Homology	CDS	75397	75708	.	-	0	ID=cds-WP_000012126.1;Parent=gene-PHA55_RS24570;Dbxref=Genbank:WP_000012126.1;Name=WP_000012126.1;gbkey=CDS;gene=traL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490564.1;locus_tag=PHA55_RS24570;product=type IV conjugative transfer system protein TraL;protein_id=WP_000012126.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	75723	76088	.	-	.	ID=gene-PHA55_RS24575;Name=traA;gbkey=Gene;gene=traA;gene_biotype=protein_coding;locus_tag=PHA55_RS24575;old_locus_tag=PHA55_24575
NZ_CP116045.1	Protein Homology	CDS	75723	76088	.	-	0	ID=cds-WP_000340270.1;Parent=gene-PHA55_RS24575;Dbxref=Genbank:WP_000340270.1;Name=WP_000340270.1;gbkey=CDS;gene=traA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001401864.1;locus_tag=PHA55_RS24575;product=type IV conjugative transfer system pilin TraA;protein_id=WP_000340270.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	76122	76349	.	-	.	ID=gene-PHA55_RS24580;Name=traY;gbkey=Gene;gene=traY;gene_biotype=protein_coding;locus_tag=PHA55_RS24580;old_locus_tag=PHA55_24580
NZ_CP116045.1	Protein Homology	CDS	76122	76349	.	-	0	ID=cds-WP_001254386.1;Parent=gene-PHA55_RS24580;Dbxref=Genbank:WP_001254386.1;Name=WP_001254386.1;gbkey=CDS;gene=traY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001254388.1;locus_tag=PHA55_RS24580;product=conjugal transfer relaxosome protein TraY;protein_id=WP_001254386.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	76443	77129	.	-	.	ID=gene-PHA55_RS24585;Name=PHA55_RS24585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24585;old_locus_tag=PHA55_24585
NZ_CP116045.1	Protein Homology	CDS	76443	77129	.	-	0	ID=cds-WP_000332492.1;Parent=gene-PHA55_RS24585;Dbxref=Genbank:WP_000332492.1;Name=WP_000332492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001589401.1;locus_tag=PHA55_RS24585;product=PAS domain-containing protein;protein_id=WP_000332492.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	77319	77702	.	-	.	ID=gene-PHA55_RS24590;Name=traM;gbkey=Gene;gene=traM;gene_biotype=protein_coding;locus_tag=PHA55_RS24590;old_locus_tag=PHA55_24590
NZ_CP116045.1	Protein Homology	CDS	77319	77702	.	-	0	ID=cds-WP_000124981.1;Parent=gene-PHA55_RS24590;Dbxref=Genbank:WP_000124981.1;Name=WP_000124981.1;gbkey=CDS;gene=traM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001297768.1;locus_tag=PHA55_RS24590;product=relaxosome protein TraM;protein_id=WP_000124981.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	78024	78626	.	+	.	ID=gene-PHA55_RS24595;Name=PHA55_RS24595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24595;old_locus_tag=PHA55_24595
NZ_CP116045.1	Protein Homology	CDS	78024	78626	.	+	0	ID=cds-WP_000243701.1;Parent=gene-PHA55_RS24595;Dbxref=Genbank:WP_000243701.1;Name=WP_000243701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000614282.1;locus_tag=PHA55_RS24595;product=transglycosylase SLT domain-containing protein;protein_id=WP_000243701.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	78921	79742	.	-	.	ID=gene-PHA55_RS24600;Name=PHA55_RS24600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24600;old_locus_tag=PHA55_24600
NZ_CP116045.1	Protein Homology	CDS	78921	79742	.	-	0	ID=cds-WP_001234475.1;Parent=gene-PHA55_RS24600;Dbxref=Genbank:WP_001234475.1;Name=WP_001234475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234456.1;locus_tag=PHA55_RS24600;product=DUF932 domain-containing protein;protein_id=WP_001234475.1;transl_table=11
NZ_CP116045.1	RefSeq	pseudogene	79861	80147	.	-	.	ID=gene-PHA55_RS24605;Name=PHA55_RS24605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS24605;old_locus_tag=PHA55_24605;pseudo=true
NZ_CP116045.1	Protein Homology	CDS	79861	80147	.	-	0	ID=cds-PHA55_RS24605;Parent=gene-PHA55_RS24605;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001825190.1;locus_tag=PHA55_RS24605;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP116045.1	RefSeq	gene	80172	80378	.	-	.	ID=gene-PHA55_RS24610;Name=PHA55_RS24610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24610;old_locus_tag=PHA55_24610
NZ_CP116045.1	Protein Homology	CDS	80172	80378	.	-	0	ID=cds-WP_040101106.1;Parent=gene-PHA55_RS24610;Dbxref=Genbank:WP_040101106.1;Name=WP_040101106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000547968.1;locus_tag=PHA55_RS24610;product=hypothetical protein;protein_id=WP_040101106.1;transl_table=11
NZ_CP116045.1	RefSeq	pseudogene	80448	80745	.	+	.	ID=gene-PHA55_RS24615;Name=PHA55_RS24615;end_range=80745,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS24615;old_locus_tag=PHA55_24615;partial=true;pseudo=true
NZ_CP116045.1	Protein Homology	CDS	80448	80745	.	+	0	ID=cds-PHA55_RS24615;Parent=gene-PHA55_RS24615;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=80745,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052655.1;locus_tag=PHA55_RS24615;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP116045.1	RefSeq	gene	81046	81171	.	-	.	ID=gene-PHA55_RS24620;Name=PHA55_RS24620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24620;old_locus_tag=PHA55_24620
NZ_CP116045.1	Protein Homology	CDS	81046	81171	.	-	0	ID=cds-WP_096937776.1;Parent=gene-PHA55_RS24620;Dbxref=Genbank:WP_096937776.1;Name=WP_096937776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052660.1;locus_tag=PHA55_RS24620;product=type I toxin-antitoxin system Hok family toxin;protein_id=WP_096937776.1;transl_table=11
NZ_CP116045.1	RefSeq	pseudogene	81113	81262	.	-	.	ID=gene-PHA55_RS24625;Name=PHA55_RS24625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS24625;old_locus_tag=PHA55_24625;partial=true;pseudo=true;start_range=.,81113
NZ_CP116045.1	Protein Homology	CDS	81113	81262	.	-	0	ID=cds-PHA55_RS24625;Parent=gene-PHA55_RS24625;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF010277.0;locus_tag=PHA55_RS24625;partial=true;product=DUF5431 family protein;pseudo=true;start_range=.,81113;transl_table=11
NZ_CP116045.1	RefSeq	pseudogene	81436	82198	.	-	.	ID=gene-PHA55_RS24630;Name=PHA55_RS24630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PHA55_RS24630;old_locus_tag=PHA55_24630;pseudo=true
NZ_CP116045.1	Protein Homology	CDS	81436	82198	.	-	0	ID=cds-PHA55_RS24630;Parent=gene-PHA55_RS24630;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052659.1;locus_tag=PHA55_RS24630;product=plasmid SOS inhibition protein A;pseudo=true;transl_table=11
NZ_CP116045.1	RefSeq	gene	82195	82629	.	-	.	ID=gene-PHA55_RS24635;Name=psiB;gbkey=Gene;gene=psiB;gene_biotype=protein_coding;locus_tag=PHA55_RS24635;old_locus_tag=PHA55_24635
NZ_CP116045.1	Protein Homology	CDS	82195	82629	.	-	0	ID=cds-WP_000845926.1;Parent=gene-PHA55_RS24635;Dbxref=Genbank:WP_000845926.1;Name=WP_000845926.1;gbkey=CDS;gene=psiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052658.1;locus_tag=PHA55_RS24635;product=conjugation system SOS inhibitor PsiB;protein_id=WP_000845926.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	82684	84642	.	-	.	ID=gene-PHA55_RS24640;Name=PHA55_RS24640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24640;old_locus_tag=PHA55_24640
NZ_CP116045.1	Protein Homology	CDS	82684	84642	.	-	0	ID=cds-WP_032219150.1;Parent=gene-PHA55_RS24640;Dbxref=Genbank:WP_032219150.1;Name=WP_032219150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052657.1;locus_tag=PHA55_RS24640;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_032219150.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	84706	84939	.	-	.	ID=gene-PHA55_RS24645;Name=PHA55_RS24645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24645;old_locus_tag=PHA55_24645
NZ_CP116045.1	Protein Homology	CDS	84706	84939	.	-	0	ID=cds-WP_000005988.1;Parent=gene-PHA55_RS24645;Dbxref=Genbank:WP_000005988.1;Name=WP_000005988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_958724.1;locus_tag=PHA55_RS24645;product=DUF905 family protein;protein_id=WP_000005988.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	85002	85541	.	-	.	ID=gene-PHA55_RS24650;Name=PHA55_RS24650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24650;old_locus_tag=PHA55_24650
NZ_CP116045.1	Protein Homology	CDS	85002	85541	.	-	0	ID=cds-WP_032219151.1;Parent=gene-PHA55_RS24650;Dbxref=Genbank:WP_032219151.1;Name=WP_032219151.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF010292.0;locus_tag=PHA55_RS24650;product=single-stranded DNA-binding protein;protein_id=WP_032219151.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	86344	86535	.	-	.	ID=gene-PHA55_RS24655;Name=PHA55_RS24655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24655;old_locus_tag=PHA55_24655
NZ_CP116045.1	Protein Homology	CDS	86344	86535	.	-	0	ID=cds-WP_001027497.1;Parent=gene-PHA55_RS24655;Dbxref=Genbank:WP_001027497.1;Name=WP_001027497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238862.1;locus_tag=PHA55_RS24655;product=hypothetical protein;protein_id=WP_001027497.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	86535	86954	.	-	.	ID=gene-PHA55_RS24660;Name=PHA55_RS24660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24660;old_locus_tag=PHA55_24660
NZ_CP116045.1	Protein Homology	CDS	86535	86954	.	-	0	ID=cds-WP_000271711.1;Parent=gene-PHA55_RS24660;Dbxref=Genbank:WP_000271711.1;Name=WP_000271711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000271690.1;locus_tag=PHA55_RS24660;product=DUF1380 family protein;protein_id=WP_000271711.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	87001	87426	.	-	.	ID=gene-PHA55_RS24665;Name=PHA55_RS24665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24665;old_locus_tag=PHA55_24665
NZ_CP116045.1	Protein Homology	CDS	87001	87426	.	-	0	ID=cds-WP_001198954.1;Parent=gene-PHA55_RS24665;Dbxref=Genbank:WP_001198954.1;Name=WP_001198954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001198918.1;locus_tag=PHA55_RS24665;product=antirestriction protein;protein_id=WP_001198954.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	87843	88613	.	-	.	ID=gene-PHA55_RS24670;Name=PHA55_RS24670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24670;old_locus_tag=PHA55_24670
NZ_CP116045.1	Protein Homology	CDS	87843	88613	.	-	0	ID=cds-WP_178086517.1;Parent=gene-PHA55_RS24670;Dbxref=Genbank:WP_178086517.1;Name=WP_178086517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052647.1;locus_tag=PHA55_RS24670;product=hypothetical protein;protein_id=WP_178086517.1;transl_table=11
NZ_CP116045.1	RefSeq	gene	88658	89092	.	-	.	ID=gene-PHA55_RS24130;Name=PHA55_RS24130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PHA55_RS24130;old_locus_tag=PHA55_24125
NZ_CP116045.1	GeneMarkS-2+	CDS	88658	89092	.	-	0	ID=cds-WP_040072501.1;Parent=gene-PHA55_RS24130;Dbxref=Genbank:WP_040072501.1;Name=WP_040072501.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PHA55_RS24130;product=DUF1380 family protein;protein_id=WP_040072501.1;transl_table=11
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