locus-tag class description DVS28_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix DVS28_RS00005 PF00308 Bacterial dnaA protein DVS28_RS00010 PF02767 DNA polymerase III beta subunit, central domain DVS28_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain DVS28_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain DVS28_RS00015 PF04978 Protein of unknown function (DUF664) DVS28_RS00020 PF02463 RecF/RecN/SMC N terminal domain DVS28_RS00030 PF01751 Toprim domain DVS28_RS00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS00030 PF00986 DNA gyrase B subunit, carboxyl terminus DVS28_RS00030 PF00204 DNA gyrase B DVS28_RS00035 PF00521 DNA gyrase/topoisomerase IV, subunit A DVS28_RS00035 PF03989 DNA gyrase C-terminal domain, beta-propeller DVS28_RS00040 PF12089 Transmembrane domain of unknown function (DUF3566) DVS28_RS00060 PF08241 Methyltransferase domain DVS28_RS00080 PF00704 Glycosyl hydrolases family 18 DVS28_RS00085 PF16177 Acetyl-coenzyme A synthetase N-terminus DVS28_RS00085 PF13193 AMP-binding enzyme C-terminal domain DVS28_RS00085 PF00501 AMP-binding enzyme DVS28_RS00090 PF02909 Tetracyclin repressor-like, C-terminal domain DVS28_RS00090 PF00440 Bacterial regulatory proteins, tetR family DVS28_RS00095 PF00117 Glutamine amidotransferase class-I DVS28_RS00100 PF00069 Protein kinase domain DVS28_RS00100 PF03793 PASTA domain DVS28_RS00105 PF00905 Penicillin binding protein transpeptidase domain DVS28_RS00110 PF01098 Cell cycle protein DVS28_RS00145 PF01804 Penicillin amidase DVS28_RS00170 PF07885 Ion channel DVS28_RS00180 PF00005 ABC transporter DVS28_RS00180 PF13732 Domain of unknown function (DUF4162) DVS28_RS00210 PF00781 Diacylglycerol kinase catalytic domain DVS28_RS00220 PF00700 Bacterial flagellin C-terminal helical region DVS28_RS00220 PF00669 Bacterial flagellin N-terminal helical region DVS28_RS00235 PF13936 Helix-turn-helix domain DVS28_RS00235 PF00665 Integrase core domain DVS28_RS00245 PF01910 Thiamine-binding protein DVS28_RS00250 PF00107 Zinc-binding dehydrogenase DVS28_RS00250 PF08240 Alcohol dehydrogenase GroES-like domain DVS28_RS00265 PF04358 DsrC like protein DVS28_RS00275 PF01475 Ferric uptake regulator family DVS28_RS00280 PF00141 Peroxidase DVS28_RS00285 PF00392 Bacterial regulatory proteins, gntR family DVS28_RS00285 PF07702 UTRA domain DVS28_RS00290 PF08240 Alcohol dehydrogenase GroES-like domain DVS28_RS00290 PF00107 Zinc-binding dehydrogenase DVS28_RS00305 PF13247 4Fe-4S dicluster domain DVS28_RS00310 PF10518 TAT (twin-arginine translocation) pathway signal sequence DVS28_RS00310 PF01568 Molydopterin dinucleotide binding domain DVS28_RS00310 PF00384 Molybdopterin oxidoreductase DVS28_RS00310 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DVS28_RS00325 PF01206 Sulfurtransferase TusA DVS28_RS00330 PF00581 Rhodanese-like domain DVS28_RS00330 PF00753 Metallo-beta-lactamase superfamily DVS28_RS00340 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DVS28_RS00340 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DVS28_RS00350 PF00082 Subtilase family DVS28_RS00355 PF00196 Bacterial regulatory proteins, luxR family DVS28_RS00370 PF01494 FAD binding domain DVS28_RS00375 PF00106 short chain dehydrogenase DVS28_RS00385 PF00378 Enoyl-CoA hydratase/isomerase DVS28_RS00390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DVS28_RS00390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DVS28_RS00390 PF02770 Acyl-CoA dehydrogenase, middle domain DVS28_RS00395 PF13193 AMP-binding enzyme C-terminal domain DVS28_RS00395 PF00501 AMP-binding enzyme DVS28_RS00400 PF01042 Endoribonuclease L-PSP DVS28_RS00405 PF07311 Dodecin DVS28_RS00410 PF04199 Putative cyclase DVS28_RS00415 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DVS28_RS00415 PF00205 Thiamine pyrophosphate enzyme, central domain DVS28_RS00415 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DVS28_RS00425 PF02694 Uncharacterised BCR, YnfA/UPF0060 family DVS28_RS00440 PF00478 IMP dehydrogenase / GMP reductase domain DVS28_RS00440 PF00571 CBS domain DVS28_RS00445 PF08448 PAS fold DVS28_RS00445 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS00465 PF01370 NAD dependent epimerase/dehydratase family DVS28_RS00485 PF00722 Glycosyl hydrolases family 16 DVS28_RS00505 PF00535 Glycosyl transferase family 2 DVS28_RS00510 PF00535 Glycosyl transferase family 2 DVS28_RS00530 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS00530 PF08448 PAS fold DVS28_RS00550 PF13193 AMP-binding enzyme C-terminal domain DVS28_RS00550 PF00501 AMP-binding enzyme DVS28_RS00570 PF13936 Helix-turn-helix domain DVS28_RS00570 PF00665 Integrase core domain DVS28_RS00575 PF02627 Carboxymuconolactone decarboxylase family DVS28_RS00595 PF01520 N-acetylmuramoyl-L-alanine amidase DVS28_RS00595 PF04122 Putative cell wall binding repeat 2 DVS28_RS00610 PF07992 Pyridine nucleotide-disulphide oxidoreductase DVS28_RS00610 PF14759 Reductase C-terminal DVS28_RS00615 PF01227 GTP cyclohydrolase I DVS28_RS00620 PF00115 Cytochrome C and Quinol oxidase polypeptide I DVS28_RS00635 PF03449 Transcription elongation factor, N-terminal DVS28_RS00635 PF01272 Transcription elongation factor, GreA/GreB, C-term DVS28_RS00645 PF01323 DSBA-like thioredoxin domain DVS28_RS00650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DVS28_RS00650 PF08269 Cache domain DVS28_RS00685 PF00355 Rieske [2Fe-2S] domain DVS28_RS00690 PF01740 STAS domain DVS28_RS00690 PF00916 Sulfate permease family DVS28_RS00695 PF01520 N-acetylmuramoyl-L-alanine amidase DVS28_RS00695 PF04122 Putative cell wall binding repeat 2 DVS28_RS00700 PF13458 Periplasmic binding protein DVS28_RS00705 PF12399 Branched-chain amino acid ATP-binding cassette transporter DVS28_RS00705 PF00005 ABC transporter DVS28_RS00710 PF00005 ABC transporter DVS28_RS00715 PF02653 Branched-chain amino acid transport system / permease component DVS28_RS00725 PF00440 Bacterial regulatory proteins, tetR family DVS28_RS00725 PF17934 Tetracyclin repressor-like, C-terminal domain DVS28_RS00730 PF00561 alpha/beta hydrolase fold DVS28_RS00735 PF13426 PAS domain DVS28_RS00735 PF00512 His Kinase A (phospho-acceptor) domain DVS28_RS00735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS00735 PF13188 PAS domain DVS28_RS00735 PF00989 PAS fold DVS28_RS00740 PF13188 PAS domain DVS28_RS00740 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS00740 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS00740 PF00563 EAL domain DVS28_RS00750 PF01068 ATP dependent DNA ligase domain DVS28_RS00750 PF04679 ATP dependent DNA ligase C terminal region DVS28_RS00755 PF00271 Helicase conserved C-terminal domain DVS28_RS00755 PF00270 DEAD/DEAH box helicase DVS28_RS00775 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DVS28_RS00775 PF07992 Pyridine nucleotide-disulphide oxidoreductase DVS28_RS00785 PF01040 UbiA prenyltransferase family DVS28_RS00800 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS00805 PF03631 Virulence factor BrkB DVS28_RS00815 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DVS28_RS00815 PF18029 Glyoxalase-like domain DVS28_RS00835 PF00892 EamA-like transporter family DVS28_RS00855 PF00085 Thioredoxin DVS28_RS00860 PF14145 YrhK-like protein DVS28_RS00885 PF00690 Cation transporter/ATPase, N-terminus DVS28_RS00885 PF00689 Cation transporting ATPase, C-terminus DVS28_RS00900 PF13476 AAA domain DVS28_RS00930 PF07992 Pyridine nucleotide-disulphide oxidoreductase DVS28_RS00930 PF04324 BFD-like [2Fe-2S] binding domain DVS28_RS00935 PF00171 Aldehyde dehydrogenase family DVS28_RS00940 PF05544 Proline racemase DVS28_RS00945 PF00701 Dihydrodipicolinate synthetase family DVS28_RS00955 PF01968 Hydantoinase/oxoprolinase DVS28_RS00955 PF05378 Hydantoinase/oxoprolinase N-terminal region DVS28_RS00960 PF02538 Hydantoinase B/oxoprolinase DVS28_RS00970 PF00005 ABC transporter DVS28_RS00975 PF02653 Branched-chain amino acid transport system / permease component DVS28_RS00980 PF01979 Amidohydrolase family DVS28_RS00980 PF13382 Adenine deaminase C-terminal domain DVS28_RS00990 PF00883 Cytosol aminopeptidase family, catalytic domain DVS28_RS00990 PF02789 Cytosol aminopeptidase family, N-terminal domain DVS28_RS00995 PF09277 Erythronolide synthase, docking DVS28_RS00995 PF00698 Acyl transferase domain DVS28_RS00995 PF16197 Ketoacyl-synthetase C-terminal extension DVS28_RS00995 PF02801 Beta-ketoacyl synthase, C-terminal domain DVS28_RS00995 PF08659 KR domain DVS28_RS00995 PF00550 Phosphopantetheine attachment site DVS28_RS00995 PF14765 Polyketide synthase dehydratase DVS28_RS00995 PF08990 Erythronolide synthase docking DVS28_RS00995 PF08240 Alcohol dehydrogenase GroES-like domain DVS28_RS00995 PF00109 Beta-ketoacyl synthase, N-terminal domain DVS28_RS01000 PF00892 EamA-like transporter family DVS28_RS01025 PF06902 Divergent 4Fe-4S mono-cluster DVS28_RS01030 PF13936 Helix-turn-helix domain DVS28_RS01030 PF00665 Integrase core domain DVS28_RS01050 PF03960 ArsC family DVS28_RS01065 PF13847 Methyltransferase domain DVS28_RS01080 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS01080 PF13426 PAS domain DVS28_RS01080 PF00563 EAL domain DVS28_RS01085 PF00196 Bacterial regulatory proteins, luxR family DVS28_RS01090 PF00391 PEP-utilising enzyme, mobile domain DVS28_RS01090 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DVS28_RS01095 PF00891 O-methyltransferase domain DVS28_RS01095 PF16864 Dimerisation domain DVS28_RS01130 PF00248 Aldo/keto reductase family DVS28_RS01145 PF10531 SLBB domain DVS28_RS01145 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DVS28_RS01145 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DVS28_RS01165 PF00685 Sulfotransferase domain DVS28_RS01170 PF00512 His Kinase A (phospho-acceptor) domain DVS28_RS01170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS01170 PF00672 HAMP domain DVS28_RS01220 PF00999 Sodium/hydrogen exchanger family DVS28_RS01220 PF02254 TrkA-N domain DVS28_RS01225 PF03480 Bacterial extracellular solute-binding protein, family 7 DVS28_RS01230 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DVS28_RS01230 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DVS28_RS01235 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DVS28_RS01270 PF01695 IstB-like ATP binding protein DVS28_RS01280 PF08494 DEAD/H associated DVS28_RS01280 PF00270 DEAD/DEAH box helicase DVS28_RS01280 PF00271 Helicase conserved C-terminal domain DVS28_RS01285 PF17191 RecG wedge domain DVS28_RS01285 PF13749 Putative ATP-dependent DNA helicase recG C-terminal DVS28_RS01285 PF00270 DEAD/DEAH box helicase DVS28_RS01325 PF13195 Protein of unknown function (DUF4011) DVS28_RS01325 PF13195 Protein of unknown function (DUF4011) DVS28_RS01325 PF13087 AAA domain DVS28_RS01325 PF13086 AAA domain DVS28_RS01325 PF13087 AAA domain DVS28_RS01325 PF13086 AAA domain DVS28_RS01330 PF00872 Transposase, Mutator family DVS28_RS01345 PF00069 Protein kinase domain DVS28_RS01345 PF03793 PASTA domain DVS28_RS01365 PF00092 von Willebrand factor type A domain DVS28_RS01370 PF13476 AAA domain DVS28_RS01375 PF00149 Calcineurin-like phosphoesterase DVS28_RS01375 PF12320 Type 5 capsule protein repressor C-terminal domain DVS28_RS01405 PF12705 PD-(D/E)XK nuclease superfamily DVS28_RS01405 PF00580 UvrD/REP helicase N-terminal domain DVS28_RS01405 PF13361 UvrD-like helicase C-terminal domain DVS28_RS01420 PF00106 short chain dehydrogenase DVS28_RS01480 PF00196 Bacterial regulatory proteins, luxR family DVS28_RS01480 PF00072 Response regulator receiver domain DVS28_RS01485 PF00392 Bacterial regulatory proteins, gntR family DVS28_RS01495 PF13732 Domain of unknown function (DUF4162) DVS28_RS01495 PF00005 ABC transporter DVS28_RS01505 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS01535 PF07085 DRTGG domain DVS28_RS01535 PF01515 Phosphate acetyl/butaryl transferase DVS28_RS01540 PF00871 Acetokinase family DVS28_RS01550 PF04389 Peptidase family M28 DVS28_RS01550 PF02225 PA domain DVS28_RS01555 PF14535 AMP-binding enzyme C-terminal domain DVS28_RS01555 PF00501 AMP-binding enzyme DVS28_RS01630 PF00583 Acetyltransferase (GNAT) family DVS28_RS01640 PF00570 HRDC domain DVS28_RS01640 PF00270 DEAD/DEAH box helicase DVS28_RS01640 PF00271 Helicase conserved C-terminal domain DVS28_RS01640 PF16124 RecQ zinc-binding DVS28_RS01640 PF09382 RQC domain DVS28_RS01665 PF00270 DEAD/DEAH box helicase DVS28_RS01665 PF00271 Helicase conserved C-terminal domain DVS28_RS01665 PF00570 HRDC domain DVS28_RS01665 PF16124 RecQ zinc-binding DVS28_RS01665 PF09382 RQC domain DVS28_RS01710 PF06508 Queuosine biosynthesis protein QueC DVS28_RS01720 PF02649 Type I GTP cyclohydrolase folE2 DVS28_RS01730 PF10576 Iron-sulfur binding domain of endonuclease III DVS28_RS01730 PF00633 Helix-hairpin-helix motif DVS28_RS01730 PF00730 HhH-GPD superfamily base excision DNA repair protein DVS28_RS01735 PF12705 PD-(D/E)XK nuclease superfamily DVS28_RS01735 PF13361 UvrD-like helicase C-terminal domain DVS28_RS01735 PF00580 UvrD/REP helicase N-terminal domain DVS28_RS01780 PF04539 Sigma-70 region 3 DVS28_RS01780 PF04545 Sigma-70, region 4 DVS28_RS01780 PF04542 Sigma-70 region 2 DVS28_RS01815 PF01734 Patatin-like phospholipase DVS28_RS01815 PF00027 Cyclic nucleotide-binding domain DVS28_RS01820 PF00067 Cytochrome P450 DVS28_RS01840 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS01860 PF08534 Redoxin DVS28_RS01870 PF01695 IstB-like ATP binding protein DVS28_RS01890 PF00005 ABC transporter DVS28_RS01890 PF13732 Domain of unknown function (DUF4162) DVS28_RS01905 PF04542 Sigma-70 region 2 DVS28_RS01905 PF08281 Sigma-70, region 4 DVS28_RS01915 PF00571 CBS domain DVS28_RS01915 PF00478 IMP dehydrogenase / GMP reductase domain DVS28_RS01940 PF17820 PDZ domain DVS28_RS01940 PF13180 PDZ domain DVS28_RS01950 PF00583 Acetyltransferase (GNAT) family DVS28_RS02015 PF00271 Helicase conserved C-terminal domain DVS28_RS02015 PF00270 DEAD/DEAH box helicase DVS28_RS02035 PF00196 Bacterial regulatory proteins, luxR family DVS28_RS02055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DVS28_RS02055 PF03466 LysR substrate binding domain DVS28_RS02060 PF03883 Peroxide stress protein YaaA DVS28_RS02095 PF00005 ABC transporter DVS28_RS02100 PF00563 EAL domain DVS28_RS02100 PF13188 PAS domain DVS28_RS02100 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS02100 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS02140 PF13476 AAA domain DVS28_RS02150 PF13361 UvrD-like helicase C-terminal domain DVS28_RS02150 PF00580 UvrD/REP helicase N-terminal domain DVS28_RS02155 PF04024 PspC domain DVS28_RS02165 PF04122 Putative cell wall binding repeat 2 DVS28_RS02165 PF01520 N-acetylmuramoyl-L-alanine amidase DVS28_RS02170 PF04851 Type III restriction enzyme, res subunit DVS28_RS02185 PF13829 Domain of unknown function (DUF4191) DVS28_RS02205 PF13936 Helix-turn-helix domain DVS28_RS02205 PF00665 Integrase core domain DVS28_RS02210 PF00005 ABC transporter DVS28_RS02210 PF00664 ABC transporter transmembrane region DVS28_RS02250 PF01370 NAD dependent epimerase/dehydratase family DVS28_RS02275 PF01497 Periplasmic binding protein DVS28_RS02280 PF01032 FecCD transport family DVS28_RS02285 PF01032 FecCD transport family DVS28_RS02290 PF00005 ABC transporter DVS28_RS02300 PF17946 RecC C-terminal domain DVS28_RS02305 PF00580 UvrD/REP helicase N-terminal domain DVS28_RS02305 PF13361 UvrD-like helicase C-terminal domain DVS28_RS02305 PF12705 PD-(D/E)XK nuclease superfamily DVS28_RS02310 PF13538 UvrD-like helicase C-terminal domain DVS28_RS02340 PF03167 Uracil DNA glycosylase superfamily DVS28_RS02375 PF08281 Sigma-70, region 4 DVS28_RS02375 PF04542 Sigma-70 region 2 DVS28_RS02385 PF06737 Transglycosylase-like domain DVS28_RS02385 PF01476 LysM domain DVS28_RS02400 PF13847 Methyltransferase domain DVS28_RS02405 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS02405 PF00563 EAL domain DVS28_RS02405 PF08447 PAS fold DVS28_RS02405 PF08448 PAS fold DVS28_RS02410 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS02410 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS02410 PF00563 EAL domain DVS28_RS02415 PF00069 Protein kinase domain DVS28_RS02415 PF13191 AAA ATPase domain DVS28_RS02420 PF00069 Protein kinase domain DVS28_RS02420 PF03793 PASTA domain DVS28_RS02430 PF13936 Helix-turn-helix domain DVS28_RS02430 PF00665 Integrase core domain DVS28_RS02435 PF03328 HpcH/HpaI aldolase/citrate lyase family DVS28_RS02440 PF01641 SelR domain DVS28_RS02445 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DVS28_RS02445 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DVS28_RS02450 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DVS28_RS02450 PF01367 5'-3' exonuclease, C-terminal SAM fold DVS28_RS02450 PF00476 DNA polymerase family A DVS28_RS02460 PF07689 KaiB domain DVS28_RS02460 PF00512 His Kinase A (phospho-acceptor) domain DVS28_RS02460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS02465 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DVS28_RS02465 PF00355 Rieske [2Fe-2S] domain DVS28_RS02475 PF05199 GMC oxidoreductase DVS28_RS02475 PF00732 GMC oxidoreductase DVS28_RS02500 PF00999 Sodium/hydrogen exchanger family DVS28_RS02515 PF03793 PASTA domain DVS28_RS02515 PF00069 Protein kinase domain DVS28_RS02525 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DVS28_RS02525 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DVS28_RS02540 PF01513 ATP-NAD kinase DVS28_RS02555 PF02080 TrkA-C domain DVS28_RS02555 PF03471 Transporter associated domain DVS28_RS02555 PF00999 Sodium/hydrogen exchanger family DVS28_RS02565 PF00800 Prephenate dehydratase DVS28_RS02575 PF00924 Mechanosensitive ion channel DVS28_RS02575 PF05552 Conserved TM helix DVS28_RS02585 PF02403 Seryl-tRNA synthetase N-terminal domain DVS28_RS02585 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DVS28_RS02590 PF00072 Response regulator receiver domain DVS28_RS02590 PF01339 CheB methylesterase DVS28_RS02595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DVS28_RS02595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DVS28_RS02595 PF02770 Acyl-CoA dehydrogenase, middle domain DVS28_RS02600 PF00440 Bacterial regulatory proteins, tetR family DVS28_RS02605 PF00950 ABC 3 transport family DVS28_RS02645 PF03328 HpcH/HpaI aldolase/citrate lyase family DVS28_RS02685 PF01566 Natural resistance-associated macrophage protein DVS28_RS02685 PF03358 NADPH-dependent FMN reductase DVS28_RS02725 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DVS28_RS02725 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DVS28_RS02735 PF01566 Natural resistance-associated macrophage protein DVS28_RS02735 PF03358 NADPH-dependent FMN reductase DVS28_RS02740 PF02779 Transketolase, pyrimidine binding domain DVS28_RS02740 PF00456 Transketolase, thiamine diphosphate binding domain DVS28_RS02740 PF02780 Transketolase, C-terminal domain DVS28_RS02750 PF00291 Pyridoxal-phosphate dependent enzyme DVS28_RS02755 PF00364 Biotin-requiring enzyme DVS28_RS02755 PF00561 alpha/beta hydrolase fold DVS28_RS02760 PF02780 Transketolase, C-terminal domain DVS28_RS02760 PF02779 Transketolase, pyrimidine binding domain DVS28_RS02765 PF00676 Dehydrogenase E1 component DVS28_RS02770 PF01513 ATP-NAD kinase DVS28_RS02795 PF00672 HAMP domain DVS28_RS02795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DVS28_RS02800 PF00072 Response regulator receiver domain DVS28_RS02800 PF01339 CheB methylesterase DVS28_RS02805 PF03705 CheR methyltransferase, all-alpha domain DVS28_RS02805 PF01739 CheR methyltransferase, SAM binding domain DVS28_RS02815 PF00004 ATPase family associated with various cellular activities (AAA) DVS28_RS02815 PF05362 Lon protease (S16) C-terminal proteolytic domain DVS28_RS02815 PF02190 ATP-dependent protease La (LON) substrate-binding domain DVS28_RS02830 PF12697 Alpha/beta hydrolase family DVS28_RS02835 PF00561 alpha/beta hydrolase fold DVS28_RS02855 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DVS28_RS02855 PF12833 Helix-turn-helix domain DVS28_RS02855 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DVS28_RS02855 PF02805 Metal binding domain of Ada DVS28_RS02860 PF02805 Metal binding domain of Ada DVS28_RS02860 PF06029 AlkA N-terminal domain DVS28_RS02860 PF00730 HhH-GPD superfamily base excision DNA repair protein DVS28_RS02860 PF12833 Helix-turn-helix domain DVS28_RS02865 PF01593 Flavin containing amine oxidoreductase DVS28_RS02880 PF00589 Phage integrase family DVS28_RS02880 PF14659 Phage integrase, N-terminal SAM-like domain DVS28_RS02905 PF00498 FHA domain DVS28_RS02905 PF03704 Bacterial transcriptional activator domain DVS28_RS02905 PF00486 Transcriptional regulatory protein, C terminal DVS28_RS02925 PF00294 pfkB family carbohydrate kinase DVS28_RS02930 PF04227 Indigoidine synthase A like protein DVS28_RS02945 PF00011 Hsp20/alpha crystallin family DVS28_RS02950 PF14437 MafB19-like deaminase DVS28_RS02960 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS02960 PF00563 EAL domain DVS28_RS02960 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS02970 PF00563 EAL domain DVS28_RS02975 PF00563 EAL domain DVS28_RS02975 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS02975 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS02980 PF00313 'Cold-shock' DNA-binding domain DVS28_RS02990 PF08448 PAS fold DVS28_RS02990 PF00563 EAL domain DVS28_RS02990 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS02990 PF08447 PAS fold DVS28_RS03010 PF12169 DNA polymerase III subunits gamma and tau domain III DVS28_RS03015 PF02575 YbaB/EbfC DNA-binding family DVS28_RS03020 PF02132 RecR protein DVS28_RS03020 PF13662 Toprim domain DVS28_RS03025 PF08241 Methyltransferase domain DVS28_RS03035 PF02547 Queuosine biosynthesis protein DVS28_RS03040 PF00106 short chain dehydrogenase DVS28_RS03045 PF00376 MerR family regulatory protein DVS28_RS03045 PF09278 MerR, DNA binding DVS28_RS03050 PF00696 Amino acid kinase family DVS28_RS03050 PF01842 ACT domain DVS28_RS03050 PF13840 ACT domain DVS28_RS03055 PF02774 Semialdehyde dehydrogenase, dimerisation domain DVS28_RS03055 PF01118 Semialdehyde dehydrogenase, NAD binding domain DVS28_RS03075 PF00464 Serine hydroxymethyltransferase DVS28_RS03080 PF08443 RimK-like ATP-grasp domain DVS28_RS03080 PF02080 TrkA-C domain DVS28_RS03080 PF18030 RimK PreATP-grasp domain DVS28_RS03090 PF00501 AMP-binding enzyme DVS28_RS03100 PF00082 Subtilase family DVS28_RS03110 PF01494 FAD binding domain DVS28_RS03115 PF00753 Metallo-beta-lactamase superfamily DVS28_RS03120 PF04075 F420H(2)-dependent quinone reductase DVS28_RS03135 PF02803 Thiolase, C-terminal domain DVS28_RS03135 PF00108 Thiolase, N-terminal domain DVS28_RS03145 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DVS28_RS03145 PF18029 Glyoxalase-like domain DVS28_RS03170 PF03636 Glycosyl hydrolase family 65, N-terminal domain DVS28_RS03170 PF03632 Glycosyl hydrolase family 65 central catalytic domain DVS28_RS03170 PF03633 Glycosyl hydrolase family 65, C-terminal domain DVS28_RS03175 PF13419 Haloacid dehalogenase-like hydrolase DVS28_RS03185 PF00480 ROK family DVS28_RS03200 PF07995 Glucose / Sorbosone dehydrogenase DVS28_RS03205 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DVS28_RS03205 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DVS28_RS03210 PF07731 Multicopper oxidase DVS28_RS03210 PF07732 Multicopper oxidase DVS28_RS03210 PF00394 Multicopper oxidase DVS28_RS03220 PF02585 GlcNAc-PI de-N-acetylase DVS28_RS03255 PF00149 Calcineurin-like phosphoesterase DVS28_RS03255 PF10518 TAT (twin-arginine translocation) pathway signal sequence DVS28_RS03260 PF17092 Penicillin-binding protein OB-like domain DVS28_RS03260 PF00905 Penicillin binding protein transpeptidase domain DVS28_RS03260 PF00912 Transglycosylase DVS28_RS03265 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DVS28_RS03270 PF02374 Anion-transporting ATPase DVS28_RS03300 PF09107 Elongation factor SelB, winged helix DVS28_RS03300 PF09106 Elongation factor SelB, winged helix DVS28_RS03300 PF09105 Elongation factor SelB, winged helix DVS28_RS03300 PF00009 Elongation factor Tu GTP binding domain DVS28_RS03300 PF03144 Elongation factor Tu domain 2 DVS28_RS03305 PF00654 Voltage gated chloride channel DVS28_RS03315 PF12390 Selenocysteine synthase N terminal DVS28_RS03315 PF03841 L-seryl-tRNA selenium transferase DVS28_RS03325 PF00884 Sulfatase DVS28_RS03350 PF03781 Sulfatase-modifying factor enzyme 1 DVS28_RS03370 PF01293 Phosphoenolpyruvate carboxykinase DVS28_RS03375 PF01520 N-acetylmuramoyl-L-alanine amidase DVS28_RS03375 PF04122 Putative cell wall binding repeat 2 DVS28_RS03380 PF01520 N-acetylmuramoyl-L-alanine amidase DVS28_RS03380 PF04122 Putative cell wall binding repeat 2 DVS28_RS03400 PF04545 Sigma-70, region 4 DVS28_RS03400 PF04542 Sigma-70 region 2 DVS28_RS03415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS03415 PF00512 His Kinase A (phospho-acceptor) domain DVS28_RS03415 PF08446 PAS fold DVS28_RS03415 PF01590 GAF domain DVS28_RS03415 PF00360 Phytochrome region DVS28_RS03420 PF00072 Response regulator receiver domain DVS28_RS03425 PF00072 Response regulator receiver domain DVS28_RS03425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS03425 PF01627 Hpt domain DVS28_RS03425 PF00672 HAMP domain DVS28_RS03425 PF00512 His Kinase A (phospho-acceptor) domain DVS28_RS03425 PF17149 Periplasmic sensor domain found in signal transduction proteins DVS28_RS03430 PF02607 B12 binding domain DVS28_RS03430 PF02310 B12 binding domain DVS28_RS03430 PF02965 Vitamin B12 dependent methionine synthase, activation domain DVS28_RS03430 PF02574 Homocysteine S-methyltransferase DVS28_RS03430 PF00809 Pterin binding enzyme DVS28_RS03435 PF00196 Bacterial regulatory proteins, luxR family DVS28_RS03435 PF00072 Response regulator receiver domain DVS28_RS03440 PF00072 Response regulator receiver domain DVS28_RS03450 PF00072 Response regulator receiver domain DVS28_RS03450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS03450 PF09308 LuxQ, periplasmic DVS28_RS03450 PF00512 His Kinase A (phospho-acceptor) domain DVS28_RS03455 PF00549 CoA-ligase DVS28_RS03455 PF02629 CoA binding domain DVS28_RS03460 PF01613 Flavin reductase like domain DVS28_RS03475 PF00072 Response regulator receiver domain DVS28_RS03485 PF01739 CheR methyltransferase, SAM binding domain DVS28_RS03485 PF03705 CheR methyltransferase, all-alpha domain DVS28_RS03490 PF00072 Response regulator receiver domain DVS28_RS03495 PF01584 CheW-like domain DVS28_RS03500 PF01584 CheW-like domain DVS28_RS03500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS03500 PF00072 Response regulator receiver domain DVS28_RS03500 PF01627 Hpt domain DVS28_RS03500 PF02895 Signal transducing histidine kinase, homodimeric domain DVS28_RS03505 PF00472 RF-1 domain DVS28_RS03510 PF01554 MatE DVS28_RS03515 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DVS28_RS03520 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DVS28_RS03525 PF00072 Response regulator receiver domain DVS28_RS03525 PF00196 Bacterial regulatory proteins, luxR family DVS28_RS03545 PF03109 ABC1 family DVS28_RS03550 PF04337 Protein of unknown function, DUF480 DVS28_RS03560 PF01152 Bacterial-like globin DVS28_RS03575 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family DVS28_RS03580 PF01938 TRAM domain DVS28_RS03580 PF05958 tRNA (Uracil-5-)-methyltransferase DVS28_RS03635 PF03576 Peptidase family S58 DVS28_RS03645 PF00378 Enoyl-CoA hydratase/isomerase DVS28_RS03650 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DVS28_RS03655 PF00814 Glycoprotease family DVS28_RS03665 PF00814 Glycoprotease family DVS28_RS03670 PF00583 Acetyltransferase (GNAT) family DVS28_RS03685 PF00166 Chaperonin 10 Kd subunit DVS28_RS03690 PF00118 TCP-1/cpn60 chaperonin family DVS28_RS03715 PF07228 Stage II sporulation protein E (SpoIIE) DVS28_RS03715 PF00672 HAMP domain DVS28_RS03730 PF13614 AAA domain DVS28_RS03735 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DVS28_RS03735 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DVS28_RS03735 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DVS28_RS03740 PF02397 Bacterial sugar transferase DVS28_RS03745 PF01266 FAD dependent oxidoreductase DVS28_RS03755 PF16363 GDP-mannose 4,6 dehydratase DVS28_RS03760 PF01370 NAD dependent epimerase/dehydratase family DVS28_RS03765 PF03808 Glycosyl transferase WecB/TagA/CpsF family DVS28_RS03770 PF00534 Glycosyl transferases group 1 DVS28_RS03770 PF13439 Glycosyltransferase Family 4 DVS28_RS03775 PF00534 Glycosyl transferases group 1 DVS28_RS03775 PF13439 Glycosyltransferase Family 4 DVS28_RS03780 PF14667 Polysaccharide biosynthesis C-terminal domain DVS28_RS03800 PF04122 Putative cell wall binding repeat 2 DVS28_RS03800 PF01520 N-acetylmuramoyl-L-alanine amidase DVS28_RS03810 PF00535 Glycosyl transferase family 2 DVS28_RS03815 PF13439 Glycosyltransferase Family 4 DVS28_RS03815 PF00534 Glycosyl transferases group 1 DVS28_RS03820 PF02585 GlcNAc-PI de-N-acetylase DVS28_RS03825 PF08421 Putative zinc binding domain DVS28_RS03825 PF08484 C-methyltransferase C-terminal domain DVS28_RS03835 PF00202 Aminotransferase class-III DVS28_RS03840 PF00483 Nucleotidyl transferase DVS28_RS03845 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DVS28_RS03860 PF02080 TrkA-C domain DVS28_RS03860 PF03600 Citrate transporter DVS28_RS03875 PF00478 IMP dehydrogenase / GMP reductase domain DVS28_RS03890 PF00437 Type II/IV secretion system protein DVS28_RS03930 PF02540 NAD synthase DVS28_RS03930 PF00958 GMP synthase C terminal domain DVS28_RS03930 PF00117 Glutamine amidotransferase class-I DVS28_RS03950 PF00580 UvrD/REP helicase N-terminal domain DVS28_RS03950 PF13361 UvrD-like helicase C-terminal domain DVS28_RS03955 PF00480 ROK family DVS28_RS03955 PF01325 Iron dependent repressor, N-terminal DNA binding domain DVS28_RS03960 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DVS28_RS03960 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DVS28_RS03965 PF00005 ABC transporter DVS28_RS03970 PF02653 Branched-chain amino acid transport system / permease component DVS28_RS03975 PF02653 Branched-chain amino acid transport system / permease component DVS28_RS03985 PF01261 Xylose isomerase-like TIM barrel DVS28_RS03990 PF04122 Putative cell wall binding repeat 2 DVS28_RS03990 PF01520 N-acetylmuramoyl-L-alanine amidase DVS28_RS04000 PF01674 Lipase (class 2) DVS28_RS04010 PF00549 CoA-ligase DVS28_RS04010 PF08442 ATP-grasp domain DVS28_RS04015 PF00549 CoA-ligase DVS28_RS04015 PF02629 CoA binding domain DVS28_RS04040 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS04040 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS04040 PF00563 EAL domain DVS28_RS04045 PF00005 ABC transporter DVS28_RS04045 PF00664 ABC transporter transmembrane region DVS28_RS04050 PF00005 ABC transporter DVS28_RS04050 PF00664 ABC transporter transmembrane region DVS28_RS04080 PF00196 Bacterial regulatory proteins, luxR family DVS28_RS04085 PF00056 lactate/malate dehydrogenase, NAD binding domain DVS28_RS04085 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DVS28_RS04095 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DVS28_RS04095 PF05221 S-adenosyl-L-homocysteine hydrolase DVS28_RS04100 PF05552 Conserved TM helix DVS28_RS04110 PF00551 Formyl transferase DVS28_RS04115 PF02142 MGS-like domain DVS28_RS04115 PF01808 AICARFT/IMPCHase bienzyme DVS28_RS04130 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS04130 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS04130 PF00563 EAL domain DVS28_RS04135 PF00069 Protein kinase domain DVS28_RS04140 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DVS28_RS04140 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DVS28_RS04145 PF16701 Adenylate cyclase regulatory domain DVS28_RS04145 PF00211 Adenylate and Guanylate cyclase catalytic domain DVS28_RS04155 PF13193 AMP-binding enzyme C-terminal domain DVS28_RS04155 PF00501 AMP-binding enzyme DVS28_RS04155 PF16177 Acetyl-coenzyme A synthetase N-terminus DVS28_RS04160 PF13188 PAS domain DVS28_RS04160 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS04160 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS04160 PF00563 EAL domain DVS28_RS04165 PF00082 Subtilase family DVS28_RS04170 PF00563 EAL domain DVS28_RS04170 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS04170 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS04175 PF00082 Subtilase family DVS28_RS04180 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS04180 PF00563 EAL domain DVS28_RS04180 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS04185 PF00082 Subtilase family DVS28_RS04190 PF03649 Uncharacterised protein family (UPF0014) DVS28_RS04195 PF00579 tRNA synthetases class I (W and Y) DVS28_RS04200 PF12848 ABC transporter DVS28_RS04200 PF16326 ABC transporter C-terminal domain DVS28_RS04200 PF00005 ABC transporter DVS28_RS04205 PF00929 Exonuclease DVS28_RS04210 PF04264 YceI-like domain DVS28_RS04220 PF00890 FAD binding domain DVS28_RS04220 PF02910 Fumarate reductase flavoprotein C-term DVS28_RS04225 PF13183 4Fe-4S dicluster domain DVS28_RS04225 PF13085 2Fe-2S iron-sulfur cluster binding domain DVS28_RS04240 PF03259 Roadblock/LC7 domain DVS28_RS04250 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS04250 PF13188 PAS domain DVS28_RS04250 PF00563 EAL domain DVS28_RS04250 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS04255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS04255 PF00512 His Kinase A (phospho-acceptor) domain DVS28_RS04265 PF01642 Methylmalonyl-CoA mutase DVS28_RS04265 PF02310 B12 binding domain DVS28_RS04285 PF08281 Sigma-70, region 4 DVS28_RS04285 PF04542 Sigma-70 region 2 DVS28_RS04285 PF12680 SnoaL-like domain DVS28_RS04300 PF00072 Response regulator receiver domain DVS28_RS04300 PF00486 Transcriptional regulatory protein, C terminal DVS28_RS04305 PF00512 His Kinase A (phospho-acceptor) domain DVS28_RS04305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS04305 PF13188 PAS domain DVS28_RS04305 PF00989 PAS fold DVS28_RS04310 PF01565 FAD binding domain DVS28_RS04310 PF02913 FAD linked oxidases, C-terminal domain DVS28_RS04330 PF13936 Helix-turn-helix domain DVS28_RS04330 PF00665 Integrase core domain DVS28_RS04335 PF00872 Transposase, Mutator family DVS28_RS04355 PF00005 ABC transporter DVS28_RS04355 PF00664 ABC transporter transmembrane region DVS28_RS04360 PF00005 ABC transporter DVS28_RS04360 PF00664 ABC transporter transmembrane region DVS28_RS04365 PF00133 tRNA synthetases class I (I, L, M and V) DVS28_RS04365 PF08264 Anticodon-binding domain of tRNA DVS28_RS04370 PF04122 Putative cell wall binding repeat 2 DVS28_RS04370 PF01520 N-acetylmuramoyl-L-alanine amidase DVS28_RS04395 PF00501 AMP-binding enzyme DVS28_RS04395 PF14535 AMP-binding enzyme C-terminal domain DVS28_RS04415 PF00701 Dihydrodipicolinate synthetase family DVS28_RS04420 PF00394 Multicopper oxidase DVS28_RS04420 PF07732 Multicopper oxidase DVS28_RS04435 PF00072 Response regulator receiver domain DVS28_RS04435 PF00196 Bacterial regulatory proteins, luxR family DVS28_RS04440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS04440 PF07730 Histidine kinase DVS28_RS04440 PF13492 GAF domain DVS28_RS04440 PF13185 GAF domain DVS28_RS04460 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DVS28_RS04460 PF07992 Pyridine nucleotide-disulphide oxidoreductase DVS28_RS04470 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS04475 PF03459 TOBE domain DVS28_RS04475 PF00005 ABC transporter DVS28_RS04485 PF00364 Biotin-requiring enzyme DVS28_RS04485 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DVS28_RS04485 PF00289 Biotin carboxylase, N-terminal domain DVS28_RS04485 PF02785 Biotin carboxylase C-terminal domain DVS28_RS04500 PF09423 PhoD-like phosphatase DVS28_RS04500 PF16655 PhoD-like phosphatase, N-terminal domain DVS28_RS04505 PF12697 Alpha/beta hydrolase family DVS28_RS04515 PF00149 Calcineurin-like phosphoesterase DVS28_RS04515 PF16656 Purple acid Phosphatase, N-terminal domain DVS28_RS04525 PF01061 ABC-2 type transporter DVS28_RS04530 PF13732 Domain of unknown function (DUF4162) DVS28_RS04530 PF00005 ABC transporter DVS28_RS04540 PF08713 DNA alkylation repair enzyme DVS28_RS04550 PF01039 Carboxyl transferase domain DVS28_RS04560 PF13411 MerR HTH family regulatory protein DVS28_RS04565 PF02237 Biotin protein ligase C terminal domain DVS28_RS04565 PF03099 Biotin/lipoate A/B protein ligase family DVS28_RS04565 PF08279 HTH domain DVS28_RS04580 PF01039 Carboxyl transferase domain DVS28_RS04590 PF00378 Enoyl-CoA hydratase/isomerase DVS28_RS04595 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DVS28_RS04595 PF00364 Biotin-requiring enzyme DVS28_RS04595 PF00289 Biotin carboxylase, N-terminal domain DVS28_RS04595 PF02785 Biotin carboxylase C-terminal domain DVS28_RS04600 PF00682 HMGL-like DVS28_RS04610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DVS28_RS04610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DVS28_RS04610 PF02770 Acyl-CoA dehydrogenase, middle domain DVS28_RS04615 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS04615 PF17151 Periplasmic sensor domain DVS28_RS04630 PF00188 Cysteine-rich secretory protein family DVS28_RS04635 PF03061 Thioesterase superfamily DVS28_RS04645 PF03193 RsgA GTPase DVS28_RS04655 PF03816 Cell envelope-related transcriptional attenuator domain DVS28_RS04655 PF13399 LytR cell envelope-related transcriptional attenuator DVS28_RS04660 PF01545 Cation efflux family DVS28_RS04665 PF00483 Nucleotidyl transferase DVS28_RS04670 PF03764 Elongation factor G, domain IV DVS28_RS04670 PF00679 Elongation factor G C-terminus DVS28_RS04670 PF00009 Elongation factor Tu GTP binding domain DVS28_RS04670 PF03144 Elongation factor Tu domain 2 DVS28_RS04670 PF14492 Elongation Factor G, domain II DVS28_RS04675 PF16363 GDP-mannose 4,6 dehydratase DVS28_RS04680 PF04321 RmlD substrate binding domain DVS28_RS04685 PF00534 Glycosyl transferases group 1 DVS28_RS04685 PF00535 Glycosyl transferase family 2 DVS28_RS04690 PF04122 Putative cell wall binding repeat 2 DVS28_RS04690 PF08486 Stage II sporulation protein DVS28_RS04695 PF00535 Glycosyl transferase family 2 DVS28_RS04715 PF16363 GDP-mannose 4,6 dehydratase DVS28_RS04725 PF00004 ATPase family associated with various cellular activities (AAA) DVS28_RS04725 PF16193 AAA C-terminal domain DVS28_RS04725 PF12002 MgsA AAA+ ATPase C terminal DVS28_RS04730 PF00483 Nucleotidyl transferase DVS28_RS04740 PF00069 Protein kinase domain DVS28_RS04740 PF13191 AAA ATPase domain DVS28_RS04750 PF15887 Putative zinc-binding metallo-peptidase DVS28_RS04750 PF10005 zinc-ribbon domain DVS28_RS04755 PF00534 Glycosyl transferases group 1 DVS28_RS04755 PF13439 Glycosyltransferase Family 4 DVS28_RS04760 PF00535 Glycosyl transferase family 2 DVS28_RS04790 PF01061 ABC-2 type transporter DVS28_RS04795 PF00005 ABC transporter DVS28_RS04800 PF00535 Glycosyl transferase family 2 DVS28_RS04810 PF02467 Transcription factor WhiB DVS28_RS04815 PF00535 Glycosyl transferase family 2 DVS28_RS04845 PF01565 FAD binding domain DVS28_RS04845 PF02913 FAD linked oxidases, C-terminal domain DVS28_RS04855 PF01266 FAD dependent oxidoreductase DVS28_RS04855 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DVS28_RS04865 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DVS28_RS04865 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DVS28_RS04865 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DVS28_RS04865 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DVS28_RS04870 PF03966 Trm112p-like protein DVS28_RS04880 PF01048 Phosphorylase superfamily DVS28_RS04885 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DVS28_RS04890 PF01634 ATP phosphoribosyltransferase DVS28_RS04890 PF08029 HisG, C-terminal domain DVS28_RS04900 PF08240 Alcohol dehydrogenase GroES-like domain DVS28_RS04900 PF00107 Zinc-binding dehydrogenase DVS28_RS04905 PF13520 Amino acid permease DVS28_RS04910 PF02254 TrkA-N domain DVS28_RS04910 PF02080 TrkA-C domain DVS28_RS04915 PF02080 TrkA-C domain DVS28_RS04915 PF02254 TrkA-N domain DVS28_RS04925 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DVS28_RS04925 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DVS28_RS04930 PF00196 Bacterial regulatory proteins, luxR family DVS28_RS04930 PF00072 Response regulator receiver domain DVS28_RS04940 PF02810 SEC-C motif DVS28_RS04940 PF01043 SecA preprotein cross-linking domain DVS28_RS04940 PF07516 SecA Wing and Scaffold domain DVS28_RS04940 PF07517 SecA DEAD-like domain DVS28_RS04945 PF01790 Prolipoprotein diacylglyceryl transferase DVS28_RS04955 PF04072 Leucine carboxyl methyltransferase DVS28_RS04965 PF00293 NUDIX domain DVS28_RS04980 PF04542 Sigma-70 region 2 DVS28_RS04980 PF08281 Sigma-70, region 4 DVS28_RS04990 PF01370 NAD dependent epimerase/dehydratase family DVS28_RS04995 PF00378 Enoyl-CoA hydratase/isomerase DVS28_RS05010 PF00364 Biotin-requiring enzyme DVS28_RS05015 PF07568 Histidine kinase DVS28_RS05015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS05015 PF12282 Signal transduction histidine kinase DVS28_RS05020 PF02467 Transcription factor WhiB DVS28_RS05025 PF00781 Diacylglycerol kinase catalytic domain DVS28_RS05030 PF01548 Transposase DVS28_RS05030 PF02371 Transposase IS116/IS110/IS902 family DVS28_RS05035 PF00912 Transglycosylase DVS28_RS05035 PF00905 Penicillin binding protein transpeptidase domain DVS28_RS05040 PF00365 Phosphofructokinase DVS28_RS05055 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain DVS28_RS05055 PF07228 Stage II sporulation protein E (SpoIIE) DVS28_RS05075 PF00563 EAL domain DVS28_RS05075 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS05075 PF13188 PAS domain DVS28_RS05075 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS05095 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS05095 PF12911 N-terminal TM domain of oligopeptide transport permease C DVS28_RS05100 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS05105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DVS28_RS05110 PF00005 ABC transporter DVS28_RS05110 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DVS28_RS05115 PF01545 Cation efflux family DVS28_RS05115 PF16916 Dimerisation domain of Zinc Transporter DVS28_RS05120 PF07729 FCD domain DVS28_RS05120 PF00392 Bacterial regulatory proteins, gntR family DVS28_RS05145 PF04122 Putative cell wall binding repeat 2 DVS28_RS05145 PF01520 N-acetylmuramoyl-L-alanine amidase DVS28_RS05175 PF04539 Sigma-70 region 3 DVS28_RS05175 PF04545 Sigma-70, region 4 DVS28_RS05175 PF04542 Sigma-70 region 2 DVS28_RS05180 PF00271 Helicase conserved C-terminal domain DVS28_RS05180 PF08494 DEAD/H associated DVS28_RS05180 PF00270 DEAD/DEAH box helicase DVS28_RS05185 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DVS28_RS05185 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DVS28_RS05195 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DVS28_RS05200 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DVS28_RS05205 PF00733 Asparagine synthase DVS28_RS05205 PF13537 Glutamine amidotransferase domain DVS28_RS05210 PF08443 RimK-like ATP-grasp domain DVS28_RS05210 PF08245 Mur ligase middle domain DVS28_RS05210 PF02875 Mur ligase family, glutamate ligase domain DVS28_RS05225 PF00196 Bacterial regulatory proteins, luxR family DVS28_RS05235 PF00005 ABC transporter DVS28_RS05255 PF00872 Transposase, Mutator family DVS28_RS05260 PF01467 Cytidylyltransferase-like DVS28_RS05295 PF17841 BID domain of Bartonella effector protein (Bep) DVS28_RS05295 PF03389 MobA/MobL family DVS28_RS05295 PF01443 Viral (Superfamily 1) RNA helicase DVS28_RS05310 PF04851 Type III restriction enzyme, res subunit DVS28_RS05390 PF02789 Cytosol aminopeptidase family, N-terminal domain DVS28_RS05390 PF00883 Cytosol aminopeptidase family, catalytic domain DVS28_RS05415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DVS28_RS05415 PF02770 Acyl-CoA dehydrogenase, middle domain DVS28_RS05415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DVS28_RS05430 PF01596 O-methyltransferase DVS28_RS05435 PF13180 PDZ domain DVS28_RS05440 PF02416 mttA/Hcf106 family DVS28_RS05445 PF01569 PAP2 superfamily DVS28_RS05455 PF10609 NUBPL iron-transfer P-loop NTPase DVS28_RS05455 PF01883 Iron-sulfur cluster assembly protein DVS28_RS05460 PF00501 AMP-binding enzyme DVS28_RS05460 PF13193 AMP-binding enzyme C-terminal domain DVS28_RS05465 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DVS28_RS05465 PF00437 Type II/IV secretion system protein DVS28_RS05470 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DVS28_RS05470 PF00437 Type II/IV secretion system protein DVS28_RS05495 PF00892 EamA-like transporter family DVS28_RS05500 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS05500 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS05500 PF00563 EAL domain DVS28_RS05505 PF00293 NUDIX domain DVS28_RS05515 PF02770 Acyl-CoA dehydrogenase, middle domain DVS28_RS05515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DVS28_RS05515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DVS28_RS05520 PF05922 Peptidase inhibitor I9 DVS28_RS05520 PF00082 Subtilase family DVS28_RS05525 PF08241 Methyltransferase domain DVS28_RS05530 PF02811 PHP domain DVS28_RS05535 PF00196 Bacterial regulatory proteins, luxR family DVS28_RS05535 PF00072 Response regulator receiver domain DVS28_RS05545 PF14759 Reductase C-terminal DVS28_RS05545 PF07992 Pyridine nucleotide-disulphide oxidoreductase DVS28_RS05550 PF02599 Global regulator protein family DVS28_RS05570 PF00771 FHIPEP family DVS28_RS05580 PF03793 PASTA domain DVS28_RS05580 PF00069 Protein kinase domain DVS28_RS05590 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DVS28_RS05635 PF01580 FtsK/SpoIIIE family DVS28_RS05665 PF01312 FlhB HrpN YscU SpaS Family DVS28_RS05675 PF01313 Bacterial export proteins, family 3 DVS28_RS05680 PF00813 FliP family DVS28_RS05690 PF04509 CheC-like family DVS28_RS05690 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DVS28_RS05695 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DVS28_RS05695 PF02154 Flagellar motor switch protein FliM DVS28_RS05720 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DVS28_RS05720 PF00460 Flagella basal body rod protein DVS28_RS05720 PF07559 Flagellar basal body protein FlaE DVS28_RS05725 PF13861 FlgD Tudor-like domain DVS28_RS05725 PF13860 FlgD Ig-like domain DVS28_RS05725 PF03963 Flagellar hook capping protein - N-terminal region DVS28_RS05735 PF01464 Transglycosylase SLT domain DVS28_RS05745 PF02874 ATP synthase alpha/beta family, beta-barrel domain DVS28_RS05745 PF18269 T3SS EscN ATPase C-terminal domain DVS28_RS05745 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DVS28_RS05750 PF02108 Flagellar assembly protein FliH DVS28_RS05755 PF14842 FliG N-terminal domain DVS28_RS05755 PF14841 FliG middle domain DVS28_RS05755 PF01706 FliG C-terminal domain DVS28_RS05760 PF01514 Secretory protein of YscJ/FliF family DVS28_RS05760 PF08345 Flagellar M-ring protein C-terminal DVS28_RS05765 PF02049 Flagellar hook-basal body complex protein FliE DVS28_RS05770 PF00460 Flagella basal body rod protein DVS28_RS05770 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DVS28_RS05775 PF00460 Flagella basal body rod protein DVS28_RS05780 PF00672 HAMP domain DVS28_RS05780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS05780 PF00512 His Kinase A (phospho-acceptor) domain DVS28_RS05780 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DVS28_RS05780 PF00072 Response regulator receiver domain DVS28_RS05780 PF01627 Hpt domain DVS28_RS05790 PF02561 Flagellar protein FliS DVS28_RS05805 PF00700 Bacterial flagellin C-terminal helical region DVS28_RS05805 PF00669 Bacterial flagellin N-terminal helical region DVS28_RS05810 PF00669 Bacterial flagellin N-terminal helical region DVS28_RS05810 PF00700 Bacterial flagellin C-terminal helical region DVS28_RS05815 PF00669 Bacterial flagellin N-terminal helical region DVS28_RS05815 PF00700 Bacterial flagellin C-terminal helical region DVS28_RS05825 PF00700 Bacterial flagellin C-terminal helical region DVS28_RS05825 PF00669 Bacterial flagellin N-terminal helical region DVS28_RS05830 PF00669 Bacterial flagellin N-terminal helical region DVS28_RS05830 PF00700 Bacterial flagellin C-terminal helical region DVS28_RS05835 PF00700 Bacterial flagellin C-terminal helical region DVS28_RS05835 PF00669 Bacterial flagellin N-terminal helical region DVS28_RS05840 PF04545 Sigma-70, region 4 DVS28_RS05840 PF04539 Sigma-70 region 3 DVS28_RS05840 PF04542 Sigma-70 region 2 DVS28_RS05845 PF00072 Response regulator receiver domain DVS28_RS05845 PF00196 Bacterial regulatory proteins, luxR family DVS28_RS05855 PF00460 Flagella basal body rod protein DVS28_RS05855 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DVS28_RS05860 PF00669 Bacterial flagellin N-terminal helical region DVS28_RS05860 PF00700 Bacterial flagellin C-terminal helical region DVS28_RS05865 PF02623 FliW protein DVS28_RS05870 PF00685 Sulfotransferase domain DVS28_RS05885 PF13181 Tetratricopeptide repeat DVS28_RS05885 PF00535 Glycosyl transferase family 2 DVS28_RS05890 PF13614 AAA domain DVS28_RS05900 PF00459 Inositol monophosphatase family DVS28_RS05905 PF00271 Helicase conserved C-terminal domain DVS28_RS05905 PF00270 DEAD/DEAH box helicase DVS28_RS05915 PF02661 Fic/DOC family DVS28_RS05930 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain DVS28_RS05955 PF01548 Transposase DVS28_RS05955 PF02371 Transposase IS116/IS110/IS902 family DVS28_RS05985 PF08362 YcdC-like protein, C-terminal region DVS28_RS05985 PF00440 Bacterial regulatory proteins, tetR family DVS28_RS06000 PF02617 ATP-dependent Clp protease adaptor protein ClpS DVS28_RS06020 PF13298 DNA polymerase Ligase (LigD) DVS28_RS06020 PF04679 ATP dependent DNA ligase C terminal region DVS28_RS06020 PF01068 ATP dependent DNA ligase domain DVS28_RS06040 PF02735 Ku70/Ku80 beta-barrel domain DVS28_RS06050 PF03193 RsgA GTPase DVS28_RS06080 PF13361 UvrD-like helicase C-terminal domain DVS28_RS06080 PF00570 HRDC domain DVS28_RS06080 PF00580 UvrD/REP helicase N-terminal domain DVS28_RS06085 PF00563 EAL domain DVS28_RS06085 PF05231 MASE1 DVS28_RS06095 PF03190 Protein of unknown function, DUF255 DVS28_RS06100 PF03852 DNA mismatch endonuclease Vsr DVS28_RS06105 PF00145 C-5 cytosine-specific DNA methylase DVS28_RS06110 PF00145 C-5 cytosine-specific DNA methylase DVS28_RS06120 PF13193 AMP-binding enzyme C-terminal domain DVS28_RS06120 PF00501 AMP-binding enzyme DVS28_RS06125 PF01061 ABC-2 type transporter DVS28_RS06140 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS06140 PF00563 EAL domain DVS28_RS06140 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS06160 PF06974 Protein of unknown function (DUF1298) DVS28_RS06160 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain DVS28_RS06170 PF02585 GlcNAc-PI de-N-acetylase DVS28_RS06175 PF02464 Competence-damaged protein DVS28_RS06175 PF00994 Probable molybdopterin binding domain DVS28_RS06190 PF01126 Heme oxygenase DVS28_RS06205 PF01032 FecCD transport family DVS28_RS06210 PF00005 ABC transporter DVS28_RS06225 PF00398 Ribosomal RNA adenine dimethylase DVS28_RS06235 PF12848 ABC transporter DVS28_RS06235 PF00005 ABC transporter DVS28_RS06240 PF12848 ABC transporter DVS28_RS06240 PF00005 ABC transporter DVS28_RS06245 PF03176 MMPL family DVS28_RS06260 PF01406 tRNA synthetases class I (C) catalytic domain DVS28_RS06265 PF01351 Ribonuclease HII DVS28_RS06275 PF00390 Malic enzyme, N-terminal domain DVS28_RS06275 PF03949 Malic enzyme, NAD binding domain DVS28_RS06285 PF00595 PDZ domain DVS28_RS06290 PF00072 Response regulator receiver domain DVS28_RS06290 PF00486 Transcriptional regulatory protein, C terminal DVS28_RS06295 PF00512 His Kinase A (phospho-acceptor) domain DVS28_RS06295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS06295 PF00672 HAMP domain DVS28_RS06305 PF00107 Zinc-binding dehydrogenase DVS28_RS06305 PF08240 Alcohol dehydrogenase GroES-like domain DVS28_RS06320 PF02391 MoaE protein DVS28_RS06340 PF04029 2-phosphosulpholactate phosphatase DVS28_RS06345 PF00512 His Kinase A (phospho-acceptor) domain DVS28_RS06345 PF16736 Single Cache-like DVS28_RS06345 PF00989 PAS fold DVS28_RS06345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS06355 PF05103 DivIVA protein DVS28_RS06360 PF03699 Uncharacterised protein family (UPF0182) DVS28_RS06365 PF08241 Methyltransferase domain DVS28_RS06390 PF02896 PEP-utilising enzyme, TIM barrel domain DVS28_RS06390 PF00391 PEP-utilising enzyme, mobile domain DVS28_RS06390 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DVS28_RS06400 PF10371 Domain of unknown function DVS28_RS06400 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DVS28_RS06400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DVS28_RS06400 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DVS28_RS06400 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DVS28_RS06410 PF00571 CBS domain DVS28_RS06410 PF01743 Poly A polymerase head domain DVS28_RS06410 PF01368 DHH family DVS28_RS06410 PF02272 DHHA1 domain DVS28_RS06415 PF00005 ABC transporter DVS28_RS06415 PF17912 MalK OB fold domain DVS28_RS06430 PF01553 Acyltransferase DVS28_RS06440 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DVS28_RS06440 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DVS28_RS06460 PF00571 CBS domain DVS28_RS06475 PF01425 Amidase DVS28_RS06505 PF13508 Acetyltransferase (GNAT) domain DVS28_RS06505 PF00583 Acetyltransferase (GNAT) family DVS28_RS06510 PF00459 Inositol monophosphatase family DVS28_RS06520 PF00743 Flavin-binding monooxygenase-like DVS28_RS06540 PF00293 NUDIX domain DVS28_RS06545 PF03949 Malic enzyme, NAD binding domain DVS28_RS06545 PF00390 Malic enzyme, N-terminal domain DVS28_RS06550 PF02742 Iron dependent repressor, metal binding and dimerisation domain DVS28_RS06550 PF18357 Diphteria toxin repressor SH3 domain DVS28_RS06550 PF01325 Iron dependent repressor, N-terminal DNA binding domain DVS28_RS06560 PF00472 RF-1 domain DVS28_RS06560 PF03462 PCRF domain DVS28_RS06595 PF05138 Phenylacetic acid catabolic protein DVS28_RS06610 PF01883 Iron-sulfur cluster assembly protein DVS28_RS06620 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DVS28_RS06620 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DVS28_RS06625 PF05726 Pirin C-terminal cupin domain DVS28_RS06625 PF02678 Pirin DVS28_RS06635 PF01261 Xylose isomerase-like TIM barrel DVS28_RS06645 PF00005 ABC transporter DVS28_RS06650 PF02687 FtsX-like permease family DVS28_RS06650 PF18075 FtsX extracellular domain DVS28_RS06655 PF01551 Peptidase family M23 DVS28_RS06655 PF01464 Transglycosylase SLT domain DVS28_RS06655 PF10145 Phage-related minor tail protein DVS28_RS06660 PF03572 Peptidase family S41 DVS28_RS06660 PF13180 PDZ domain DVS28_RS06665 PF01668 SmpB protein DVS28_RS06670 PF00563 EAL domain DVS28_RS06670 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS06670 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS06685 PF00271 Helicase conserved C-terminal domain DVS28_RS06685 PF00270 DEAD/DEAH box helicase DVS28_RS06690 PF04307 LexA-binding, inner membrane-associated putative hydrolase DVS28_RS06705 PF18698 Histidine kinase sensor domain DVS28_RS06705 PF00512 His Kinase A (phospho-acceptor) domain DVS28_RS06705 PF00989 PAS fold DVS28_RS06705 PF00672 HAMP domain DVS28_RS06705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS06710 PF02769 AIR synthase related protein, C-terminal domain DVS28_RS06710 PF00586 AIR synthase related protein, N-terminal domain DVS28_RS06720 PF02597 ThiS family DVS28_RS06725 PF00291 Pyridoxal-phosphate dependent enzyme DVS28_RS06745 PF02803 Thiolase, C-terminal domain DVS28_RS06745 PF00108 Thiolase, N-terminal domain DVS28_RS06750 PF02770 Acyl-CoA dehydrogenase, middle domain DVS28_RS06750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DVS28_RS06750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DVS28_RS06755 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DVS28_RS06755 PF02770 Acyl-CoA dehydrogenase, middle domain DVS28_RS06755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DVS28_RS06765 PF00561 alpha/beta hydrolase fold DVS28_RS06765 PF00106 short chain dehydrogenase DVS28_RS06780 PF01177 Asp/Glu/Hydantoin racemase DVS28_RS06785 PF12706 Beta-lactamase superfamily domain DVS28_RS06790 PF03725 3' exoribonuclease family, domain 2 DVS28_RS06790 PF01138 3' exoribonuclease family, domain 1 DVS28_RS06795 PF01725 Ham1 family DVS28_RS06800 PF00004 ATPase family associated with various cellular activities (AAA) DVS28_RS06800 PF17862 AAA+ lid domain DVS28_RS06800 PF01434 Peptidase family M41 DVS28_RS06820 PF03259 Roadblock/LC7 domain DVS28_RS06845 PF01979 Amidohydrolase family DVS28_RS06860 PF00232 Glycosyl hydrolase family 1 DVS28_RS06870 PF00487 Fatty acid desaturase DVS28_RS06875 PF00970 Oxidoreductase FAD-binding domain DVS28_RS06875 PF00175 Oxidoreductase NAD-binding domain DVS28_RS06875 PF00111 2Fe-2S iron-sulfur cluster binding domain DVS28_RS06880 PF00069 Protein kinase domain DVS28_RS06880 PF13191 AAA ATPase domain DVS28_RS06885 PF13411 MerR HTH family regulatory protein DVS28_RS06895 PF07969 Amidohydrolase family DVS28_RS06905 PF08448 PAS fold DVS28_RS06905 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS06925 PF00155 Aminotransferase class I and II DVS28_RS06930 PF00313 'Cold-shock' DNA-binding domain DVS28_RS06945 PF08271 TFIIB zinc-binding DVS28_RS06955 PF00082 Subtilase family DVS28_RS06965 PF00176 SNF2 family N-terminal domain DVS28_RS06965 PF00271 Helicase conserved C-terminal domain DVS28_RS06965 PF12419 SNF2 Helicase protein DVS28_RS06975 PF03301 Tryptophan 2,3-dioxygenase DVS28_RS06980 PF02254 TrkA-N domain DVS28_RS06980 PF07885 Ion channel DVS28_RS06985 PF00246 Zinc carboxypeptidase DVS28_RS06990 PF13302 Acetyltransferase (GNAT) domain DVS28_RS07000 PF03458 UPF0126 domain DVS28_RS07015 PF00196 Bacterial regulatory proteins, luxR family DVS28_RS07025 PF00005 ABC transporter DVS28_RS07025 PF13732 Domain of unknown function (DUF4162) DVS28_RS07035 PF01595 Cyclin M transmembrane N-terminal domain DVS28_RS07035 PF00571 CBS domain DVS28_RS07040 PF13188 PAS domain DVS28_RS07040 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS07040 PF00563 EAL domain DVS28_RS07040 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS07050 PF00106 short chain dehydrogenase DVS28_RS07055 PF05368 NmrA-like family DVS28_RS07080 PF13411 MerR HTH family regulatory protein DVS28_RS07090 PF03243 Alkylmercury lyase DVS28_RS07090 PF12324 Helix-turn-helix domain of alkylmercury lyase DVS28_RS07095 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DVS28_RS07095 PF07992 Pyridine nucleotide-disulphide oxidoreductase DVS28_RS07100 PF00486 Transcriptional regulatory protein, C terminal DVS28_RS07100 PF00931 NB-ARC domain DVS28_RS07100 PF03704 Bacterial transcriptional activator domain DVS28_RS07125 PF00082 Subtilase family DVS28_RS07165 PF02899 Phage integrase, N-terminal SAM-like domain DVS28_RS07165 PF00589 Phage integrase family DVS28_RS07175 PF13191 AAA ATPase domain DVS28_RS07175 PF00069 Protein kinase domain DVS28_RS07215 PF02586 SOS response associated peptidase (SRAP) DVS28_RS07240 PF00266 Aminotransferase class-V DVS28_RS07250 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DVS28_RS07250 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DVS28_RS07250 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DVS28_RS07250 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DVS28_RS07260 PF00027 Cyclic nucleotide-binding domain DVS28_RS07260 PF00325 Bacterial regulatory proteins, crp family DVS28_RS07265 PF00440 Bacterial regulatory proteins, tetR family DVS28_RS07275 PF08240 Alcohol dehydrogenase GroES-like domain DVS28_RS07275 PF00107 Zinc-binding dehydrogenase DVS28_RS07280 PF13276 HTH-like domain DVS28_RS07280 PF13333 Integrase core domain DVS28_RS07280 PF00665 Integrase core domain DVS28_RS07290 PF17841 BID domain of Bartonella effector protein (Bep) DVS28_RS07290 PF01443 Viral (Superfamily 1) RNA helicase DVS28_RS07290 PF03389 MobA/MobL family DVS28_RS07320 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DVS28_RS07320 PF05698 Bacterial trigger factor protein (TF) C-terminus DVS28_RS07320 PF05697 Bacterial trigger factor protein (TF) DVS28_RS07330 PF00574 Clp protease DVS28_RS07335 PF10431 C-terminal, D2-small domain, of ClpB protein DVS28_RS07335 PF06689 ClpX C4-type zinc finger DVS28_RS07335 PF07724 AAA domain (Cdc48 subfamily) DVS28_RS07345 PF00561 alpha/beta hydrolase fold DVS28_RS07355 PF13302 Acetyltransferase (GNAT) domain DVS28_RS07365 PF08264 Anticodon-binding domain of tRNA DVS28_RS07365 PF10458 Valyl tRNA synthetase tRNA binding arm DVS28_RS07365 PF00133 tRNA synthetases class I (I, L, M and V) DVS28_RS07375 PF08245 Mur ligase middle domain DVS28_RS07375 PF02875 Mur ligase family, glutamate ligase domain DVS28_RS07385 PF02600 Disulfide bond formation protein DsbB DVS28_RS07390 PF00334 Nucleoside diphosphate kinase DVS28_RS07395 PF01053 Cys/Met metabolism PLP-dependent enzyme DVS28_RS07400 PF07687 Peptidase dimerisation domain DVS28_RS07400 PF01546 Peptidase family M20/M25/M40 DVS28_RS07405 PF07992 Pyridine nucleotide-disulphide oxidoreductase DVS28_RS07410 PF13188 PAS domain DVS28_RS07410 PF00563 EAL domain DVS28_RS07410 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS07410 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS07425 PF00196 Bacterial regulatory proteins, luxR family DVS28_RS07430 PF12826 Helix-hairpin-helix motif DVS28_RS07430 PF04002 RadC-like JAB domain DVS28_RS07440 PF04085 rod shape-determining protein MreC DVS28_RS07455 PF05223 NTF2-like N-terminal transpeptidase domain DVS28_RS07455 PF03717 Penicillin-binding Protein dimerisation domain DVS28_RS07455 PF00905 Penicillin binding protein transpeptidase domain DVS28_RS07460 PF01098 Cell cycle protein DVS28_RS07465 PF04055 Radical SAM superfamily DVS28_RS07470 PF03881 Fructosamine kinase DVS28_RS07475 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DVS28_RS07475 PF13378 Enolase C-terminal domain-like DVS28_RS07485 PF00749 tRNA synthetases class I (E and Q), catalytic domain DVS28_RS07485 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DVS28_RS07495 PF02566 OsmC-like protein DVS28_RS07505 PF00069 Protein kinase domain DVS28_RS07505 PF13191 AAA ATPase domain DVS28_RS07510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DVS28_RS07510 PF02770 Acyl-CoA dehydrogenase, middle domain DVS28_RS07510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DVS28_RS07515 PF00067 Cytochrome P450 DVS28_RS07520 PF16859 Tetracyclin repressor-like, C-terminal domain DVS28_RS07520 PF00440 Bacterial regulatory proteins, tetR family DVS28_RS07525 PF00171 Aldehyde dehydrogenase family DVS28_RS07530 PF02803 Thiolase, C-terminal domain DVS28_RS07530 PF00108 Thiolase, N-terminal domain DVS28_RS07535 PF00378 Enoyl-CoA hydratase/isomerase DVS28_RS07535 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DVS28_RS07535 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DVS28_RS07550 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain DVS28_RS07550 PF06974 Protein of unknown function (DUF1298) DVS28_RS07570 PF10150 Ribonuclease E/G family DVS28_RS07575 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DVS28_RS07575 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DVS28_RS07575 PF00034 Cytochrome c DVS28_RS07580 PF00115 Cytochrome C and Quinol oxidase polypeptide I DVS28_RS07600 PF08281 Sigma-70, region 4 DVS28_RS07600 PF04542 Sigma-70 region 2 DVS28_RS07610 PF00072 Response regulator receiver domain DVS28_RS07610 PF00211 Adenylate and Guanylate cyclase catalytic domain DVS28_RS07615 PF13193 AMP-binding enzyme C-terminal domain DVS28_RS07615 PF00501 AMP-binding enzyme DVS28_RS07620 PF00175 Oxidoreductase NAD-binding domain DVS28_RS07620 PF00258 Flavodoxin DVS28_RS07620 PF00667 FAD binding domain DVS28_RS07635 PF00829 Ribosomal prokaryotic L21 protein DVS28_RS07640 PF01016 Ribosomal L27 protein DVS28_RS07650 PF13530 Sterol carrier protein domain DVS28_RS07650 PF17668 Acetyltransferase (GNAT) domain DVS28_RS07655 PF00291 Pyridoxal-phosphate dependent enzyme DVS28_RS07655 PF00571 CBS domain DVS28_RS07660 PF01053 Cys/Met metabolism PLP-dependent enzyme DVS28_RS07675 PF02709 N-terminal domain of galactosyltransferase DVS28_RS07675 PF00535 Glycosyl transferase family 2 DVS28_RS07690 PF00534 Glycosyl transferases group 1 DVS28_RS07690 PF13439 Glycosyltransferase Family 4 DVS28_RS07705 PF09277 Erythronolide synthase, docking DVS28_RS07705 PF14765 Polyketide synthase dehydratase DVS28_RS07705 PF00550 Phosphopantetheine attachment site DVS28_RS07705 PF00109 Beta-ketoacyl synthase, N-terminal domain DVS28_RS07705 PF02801 Beta-ketoacyl synthase, C-terminal domain DVS28_RS07705 PF08659 KR domain DVS28_RS07705 PF16197 Ketoacyl-synthetase C-terminal extension DVS28_RS07705 PF08990 Erythronolide synthase docking DVS28_RS07705 PF08240 Alcohol dehydrogenase GroES-like domain DVS28_RS07705 PF00698 Acyl transferase domain DVS28_RS07720 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DVS28_RS07725 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DVS28_RS07725 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DVS28_RS07730 PF01018 GTP1/OBG DVS28_RS07730 PF01926 50S ribosome-binding GTPase DVS28_RS07730 PF09269 Domain of unknown function (DUF1967) DVS28_RS07735 PF01472 PUA domain DVS28_RS07735 PF00696 Amino acid kinase family DVS28_RS07740 PF00082 Subtilase family DVS28_RS07745 PF13556 PucR C-terminal helix-turn-helix domain DVS28_RS07750 PF02909 Tetracyclin repressor-like, C-terminal domain DVS28_RS07750 PF00440 Bacterial regulatory proteins, tetR family DVS28_RS07755 PF03176 MMPL family DVS28_RS07755 PF12823 Domain of unknown function (DUF3817) DVS28_RS07765 PF07724 AAA domain (Cdc48 subfamily) DVS28_RS07765 PF02861 Clp amino terminal domain, pathogenicity island component DVS28_RS07765 PF10431 C-terminal, D2-small domain, of ClpB protein DVS28_RS07765 PF00004 ATPase family associated with various cellular activities (AAA) DVS28_RS07765 PF17871 AAA lid domain DVS28_RS07785 PF01467 Cytidylyltransferase-like DVS28_RS07790 PF03816 Cell envelope-related transcriptional attenuator domain DVS28_RS07840 PF10531 SLBB domain DVS28_RS07845 PF00753 Metallo-beta-lactamase superfamily DVS28_RS07845 PF13567 Domain of unknown function (DUF4131) DVS28_RS07845 PF03772 Competence protein DVS28_RS07865 PF00196 Bacterial regulatory proteins, luxR family DVS28_RS07865 PF00072 Response regulator receiver domain DVS28_RS07900 PF04122 Putative cell wall binding repeat 2 DVS28_RS07900 PF01520 N-acetylmuramoyl-L-alanine amidase DVS28_RS07905 PF01649 Ribosomal protein S20 DVS28_RS07910 PF06421 GTP-binding protein LepA C-terminus DVS28_RS07910 PF00679 Elongation factor G C-terminus DVS28_RS07910 PF00009 Elongation factor Tu GTP binding domain DVS28_RS07920 PF04055 Radical SAM superfamily DVS28_RS07925 PF00989 PAS fold DVS28_RS07925 PF01590 GAF domain DVS28_RS07925 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS07925 PF00563 EAL domain DVS28_RS07930 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS07930 PF00563 EAL domain DVS28_RS07930 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS07945 PF01628 HrcA protein C terminal domain DVS28_RS07950 PF01556 DnaJ C terminal domain DVS28_RS07950 PF00226 DnaJ domain DVS28_RS07950 PF00684 DnaJ central domain DVS28_RS07955 PF04452 RNA methyltransferase DVS28_RS07960 PF04122 Putative cell wall binding repeat 2 DVS28_RS07960 PF01520 N-acetylmuramoyl-L-alanine amidase DVS28_RS07965 PF00326 Prolyl oligopeptidase family DVS28_RS07965 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DVS28_RS07980 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS07980 PF00563 EAL domain DVS28_RS07980 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS07985 PF03405 Fatty acid desaturase DVS28_RS08000 PF01230 HIT domain DVS28_RS08015 PF02583 Metal-sensitive transcriptional repressor DVS28_RS08020 PF01568 Molydopterin dinucleotide binding domain DVS28_RS08020 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DVS28_RS08020 PF00384 Molybdopterin oxidoreductase DVS28_RS08030 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DVS28_RS08030 PF00205 Thiamine pyrophosphate enzyme, central domain DVS28_RS08030 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DVS28_RS08035 PF13302 Acetyltransferase (GNAT) domain DVS28_RS08050 PF00072 Response regulator receiver domain DVS28_RS08050 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS08060 PF02562 PhoH-like protein DVS28_RS08065 PF02130 Uncharacterized protein family UPF0054 DVS28_RS08070 PF01595 Cyclin M transmembrane N-terminal domain DVS28_RS08070 PF00571 CBS domain DVS28_RS08070 PF03471 Transporter associated domain DVS28_RS08075 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DVS28_RS08080 PF01790 Prolipoprotein diacylglyceryl transferase DVS28_RS08100 PF00834 Ribulose-phosphate 3 epimerase family DVS28_RS08105 PF07739 TipAS antibiotic-recognition domain DVS28_RS08105 PF13411 MerR HTH family regulatory protein DVS28_RS08110 PF01965 DJ-1/PfpI family DVS28_RS08120 PF01965 DJ-1/PfpI family DVS28_RS08125 PF02803 Thiolase, C-terminal domain DVS28_RS08125 PF00108 Thiolase, N-terminal domain DVS28_RS08145 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DVS28_RS08145 PF03129 Anticodon binding domain DVS28_RS08145 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DVS28_RS08155 PF00872 Transposase, Mutator family DVS28_RS08160 PF01230 HIT domain DVS28_RS08170 PF08544 GHMP kinases C terminal DVS28_RS08170 PF10509 Galactokinase galactose-binding signature DVS28_RS08170 PF00288 GHMP kinases N terminal domain DVS28_RS08175 PF08220 DeoR-like helix-turn-helix domain DVS28_RS08175 PF00455 DeoR C terminal sensor domain DVS28_RS08185 PF08533 Beta-galactosidase C-terminal domain DVS28_RS08185 PF02449 Beta-galactosidase DVS28_RS08185 PF08532 Beta-galactosidase trimerisation domain DVS28_RS08190 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain DVS28_RS08190 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain DVS28_RS08200 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS08205 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS08210 PF00756 Putative esterase DVS28_RS08210 PF01476 LysM domain DVS28_RS08220 PF01066 CDP-alcohol phosphatidyltransferase DVS28_RS08225 PF03279 Bacterial lipid A biosynthesis acyltransferase DVS28_RS08230 PF13439 Glycosyltransferase Family 4 DVS28_RS08240 PF01680 SOR/SNZ family DVS28_RS08245 PF13091 PLD-like domain DVS28_RS08245 PF13396 Phospholipase_D-nuclease N-terminal DVS28_RS08255 PF05593 RHS Repeat DVS28_RS08275 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DVS28_RS08275 PF02378 Phosphotransferase system, EIIC DVS28_RS08280 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DVS28_RS08280 PF02378 Phosphotransferase system, EIIC DVS28_RS08280 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DVS28_RS08285 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DVS28_RS08290 PF01174 SNO glutamine amidotransferase family DVS28_RS08295 PF01709 Transcriptional regulator DVS28_RS08300 PF00583 Acetyltransferase (GNAT) family DVS28_RS08315 PF01965 DJ-1/PfpI family DVS28_RS08320 PF01565 FAD binding domain DVS28_RS08320 PF02913 FAD linked oxidases, C-terminal domain DVS28_RS08330 PF07499 RuvA, C-terminal domain DVS28_RS08330 PF01330 RuvA N terminal domain DVS28_RS08335 PF05496 Holliday junction DNA helicase RuvB P-loop domain DVS28_RS08335 PF17864 RuvB AAA lid domain DVS28_RS08335 PF05491 RuvB C-terminal winged helix domain DVS28_RS08340 PF02699 Preprotein translocase subunit DVS28_RS08350 PF02355 Protein export membrane protein DVS28_RS08355 PF07549 SecD/SecF GG Motif DVS28_RS08355 PF02355 Protein export membrane protein DVS28_RS08360 PF00156 Phosphoribosyl transferase domain DVS28_RS08365 PF13291 ACT domain DVS28_RS08365 PF04607 Region found in RelA / SpoT proteins DVS28_RS08365 PF02824 TGS domain DVS28_RS08370 PF00753 Metallo-beta-lactamase superfamily DVS28_RS08375 PF13393 Histidyl-tRNA synthetase DVS28_RS08375 PF03129 Anticodon binding domain DVS28_RS08395 PF00563 EAL domain DVS28_RS08395 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS08395 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS08400 PF02938 GAD domain DVS28_RS08400 PF01336 OB-fold nucleic acid binding domain DVS28_RS08400 PF00152 tRNA synthetases class II (D, K and N) DVS28_RS08415 PF13439 Glycosyltransferase Family 4 DVS28_RS08415 PF00534 Glycosyl transferases group 1 DVS28_RS08425 PF16363 GDP-mannose 4,6 dehydratase DVS28_RS08430 PF00953 Glycosyl transferase family 4 DVS28_RS08440 PF00872 Transposase, Mutator family DVS28_RS08445 PF02350 UDP-N-acetylglucosamine 2-epimerase DVS28_RS08450 PF05050 Methyltransferase FkbM domain DVS28_RS08470 PF14524 Wzt C-terminal domain DVS28_RS08470 PF00005 ABC transporter DVS28_RS08485 PF02397 Bacterial sugar transferase DVS28_RS08515 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DVS28_RS08520 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DVS28_RS08520 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DVS28_RS08525 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DVS28_RS08525 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DVS28_RS08525 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DVS28_RS08530 PF00005 ABC transporter DVS28_RS08530 PF14524 Wzt C-terminal domain DVS28_RS08540 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DVS28_RS08540 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DVS28_RS08540 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DVS28_RS08545 PF01370 NAD dependent epimerase/dehydratase family DVS28_RS08550 PF00248 Aldo/keto reductase family DVS28_RS08555 PF04122 Putative cell wall binding repeat 2 DVS28_RS08555 PF08486 Stage II sporulation protein DVS28_RS08560 PF00665 Integrase core domain DVS28_RS08560 PF13936 Helix-turn-helix domain DVS28_RS08590 PF00378 Enoyl-CoA hydratase/isomerase DVS28_RS08600 PF12728 Helix-turn-helix domain DVS28_RS08610 PF00293 NUDIX domain DVS28_RS08615 PF17853 GGDEF-like domain DVS28_RS08615 PF13556 PucR C-terminal helix-turn-helix domain DVS28_RS08620 PF00933 Glycosyl hydrolase family 3 N terminal domain DVS28_RS08620 PF01915 Glycosyl hydrolase family 3 C-terminal domain DVS28_RS08625 PF02272 DHHA1 domain DVS28_RS08625 PF01411 tRNA synthetases class II (A) DVS28_RS08625 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DVS28_RS08635 PF03652 Holliday junction resolvase DVS28_RS08640 PF02618 YceG-like family DVS28_RS08645 PF01488 Shikimate / quinate 5-dehydrogenase DVS28_RS08645 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DVS28_RS08645 PF08501 Shikimate dehydrogenase substrate binding domain DVS28_RS08655 PF11987 Translation-initiation factor 2 DVS28_RS08655 PF00009 Elongation factor Tu GTP binding domain DVS28_RS08655 PF04760 Translation initiation factor IF-2, N-terminal region DVS28_RS08660 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DVS28_RS08660 PF00437 Type II/IV secretion system protein DVS28_RS08665 PF00437 Type II/IV secretion system protein DVS28_RS08670 PF00482 Type II secretion system (T2SS), protein F DVS28_RS08690 PF07963 Prokaryotic N-terminal methylation motif DVS28_RS08690 PF14245 Type IV pilin PilA DVS28_RS08695 PF08334 Type II secretion system (T2SS), protein G DVS28_RS08695 PF07963 Prokaryotic N-terminal methylation motif DVS28_RS08700 PF12728 Helix-turn-helix domain DVS28_RS08705 PF11104 Type IV pilus assembly protein PilM; DVS28_RS08725 PF01264 Chorismate synthase DVS28_RS08730 PF01202 Shikimate kinase DVS28_RS08735 PF01761 3-dehydroquinate synthase DVS28_RS08740 PF01321 Creatinase/Prolidase N-terminal domain DVS28_RS08740 PF00557 Metallopeptidase family M24 DVS28_RS08745 PF08207 Elongation factor P (EF-P) KOW-like domain DVS28_RS08745 PF01132 Elongation factor P (EF-P) OB domain DVS28_RS08745 PF09285 Elongation factor P, C-terminal DVS28_RS08750 PF01029 NusB family DVS28_RS08760 PF00156 Phosphoribosyl transferase domain DVS28_RS08765 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DVS28_RS08765 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DVS28_RS08770 PF01979 Amidohydrolase family DVS28_RS08775 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DVS28_RS08775 PF00117 Glutamine amidotransferase class-I DVS28_RS08780 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DVS28_RS08780 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DVS28_RS08780 PF02142 MGS-like domain DVS28_RS08800 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DVS28_RS08800 PF00175 Oxidoreductase NAD-binding domain DVS28_RS08805 PF01180 Dihydroorotate dehydrogenase DVS28_RS08810 PF01520 N-acetylmuramoyl-L-alanine amidase DVS28_RS08810 PF04122 Putative cell wall binding repeat 2 DVS28_RS08825 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DVS28_RS08830 PF01047 MarR family DVS28_RS08830 PF00583 Acetyltransferase (GNAT) family DVS28_RS08835 PF00156 Phosphoribosyl transferase domain DVS28_RS08845 PF00625 Guanylate kinase DVS28_RS08850 PF01192 RNA polymerase Rpb6 DVS28_RS08855 PF02441 Flavoprotein DVS28_RS08855 PF04127 DNA / pantothenate metabolism flavoprotein DVS28_RS08860 PF02772 S-adenosylmethionine synthetase, central domain DVS28_RS08860 PF00438 S-adenosylmethionine synthetase, N-terminal domain DVS28_RS08860 PF02773 S-adenosylmethionine synthetase, C-terminal domain DVS28_RS08865 PF18074 Primosomal protein N C-terminal domain DVS28_RS08865 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DVS28_RS08865 PF00271 Helicase conserved C-terminal domain DVS28_RS08865 PF17764 3′ DNA-binding domain (3′BD) DVS28_RS08865 PF04851 Type III restriction enzyme, res subunit DVS28_RS08870 PF01327 Polypeptide deformylase DVS28_RS08875 PF02911 Formyl transferase, C-terminal domain DVS28_RS08875 PF00551 Formyl transferase DVS28_RS08880 PF01189 16S rRNA methyltransferase RsmB/F DVS28_RS08880 PF01029 NusB family DVS28_RS08885 PF00072 Response regulator receiver domain DVS28_RS08885 PF00486 Transcriptional regulatory protein, C terminal DVS28_RS08890 PF01872 RibD C-terminal domain DVS28_RS08890 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DVS28_RS08895 PF00677 Lumazine binding domain DVS28_RS08900 PF00925 GTP cyclohydrolase II DVS28_RS08900 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DVS28_RS08905 PF00885 6,7-dimethyl-8-ribityllumazine synthase DVS28_RS08925 PF00171 Aldehyde dehydrogenase family DVS28_RS08935 PF00664 ABC transporter transmembrane region DVS28_RS08935 PF00005 ABC transporter DVS28_RS08945 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DVS28_RS08950 PF06750 Bacterial Peptidase A24 N-terminal domain DVS28_RS08950 PF01478 Type IV leader peptidase family DVS28_RS08960 PF01632 Ribosomal protein L35 DVS28_RS08965 PF00453 Ribosomal protein L20 DVS28_RS08970 PF08032 RNA 2'-O ribose methyltransferase substrate binding DVS28_RS08970 PF00588 SpoU rRNA Methylase family DVS28_RS08975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS08975 PF00512 His Kinase A (phospho-acceptor) domain DVS28_RS08975 PF18698 Histidine kinase sensor domain DVS28_RS08975 PF00672 HAMP domain DVS28_RS08980 PF01409 tRNA synthetases class II core domain (F) DVS28_RS08980 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DVS28_RS08985 PF03483 B3/4 domain DVS28_RS08985 PF01588 Putative tRNA binding domain DVS28_RS08985 PF03147 Ferredoxin-fold anticodon binding domain DVS28_RS08985 PF03484 tRNA synthetase B5 domain DVS28_RS08985 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DVS28_RS08995 PF00174 Oxidoreductase molybdopterin binding domain DVS28_RS09005 PF00480 ROK family DVS28_RS09025 PF00360 Phytochrome region DVS28_RS09025 PF08446 PAS fold DVS28_RS09025 PF01590 GAF domain DVS28_RS09025 PF00512 His Kinase A (phospho-acceptor) domain DVS28_RS09025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS09030 PF00296 Luciferase-like monooxygenase DVS28_RS09035 PF05199 GMC oxidoreductase DVS28_RS09050 PF00676 Dehydrogenase E1 component DVS28_RS09055 PF02774 Semialdehyde dehydrogenase, dimerisation domain DVS28_RS09055 PF01118 Semialdehyde dehydrogenase, NAD binding domain DVS28_RS09060 PF01960 ArgJ family DVS28_RS09065 PF00696 Amino acid kinase family DVS28_RS09070 PF00202 Aminotransferase class-III DVS28_RS09075 PF00072 Response regulator receiver domain DVS28_RS09075 PF00486 Transcriptional regulatory protein, C terminal DVS28_RS09080 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DVS28_RS09080 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DVS28_RS09085 PF02863 Arginine repressor, C-terminal domain DVS28_RS09085 PF01316 Arginine repressor, DNA binding domain DVS28_RS09095 PF14698 Argininosuccinate lyase C-terminal DVS28_RS09095 PF00206 Lyase DVS28_RS09120 PF14791 DNA polymerase beta thumb DVS28_RS09120 PF14716 Helix-hairpin-helix domain DVS28_RS09120 PF02811 PHP domain DVS28_RS09125 PF02245 Methylpurine-DNA glycosylase (MPG) DVS28_RS09140 PF02653 Branched-chain amino acid transport system / permease component DVS28_RS09145 PF02653 Branched-chain amino acid transport system / permease component DVS28_RS09145 PF11862 Domain of unknown function (DUF3382) DVS28_RS09150 PF00005 ABC transporter DVS28_RS09150 PF12399 Branched-chain amino acid ATP-binding cassette transporter DVS28_RS09155 PF00005 ABC transporter DVS28_RS09205 PF01695 IstB-like ATP binding protein DVS28_RS09225 PF00753 Metallo-beta-lactamase superfamily DVS28_RS09250 PF01728 FtsJ-like methyltransferase DVS28_RS09250 PF01479 S4 domain DVS28_RS09260 PF02463 RecF/RecN/SMC N terminal domain DVS28_RS09270 PF06418 CTP synthase N-terminus DVS28_RS09270 PF00117 Glutamine amidotransferase class-I DVS28_RS09280 PF00293 NUDIX domain DVS28_RS09285 PF00589 Phage integrase family DVS28_RS09285 PF02899 Phage integrase, N-terminal SAM-like domain DVS28_RS09290 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DVS28_RS09290 PF00591 Glycosyl transferase family, a/b domain DVS28_RS09290 PF02885 Glycosyl transferase family, helical bundle domain DVS28_RS09300 PF02616 Segregation and condensation protein ScpA DVS28_RS09305 PF04079 Segregation and condensation complex subunit ScpB DVS28_RS09310 PF00849 RNA pseudouridylate synthase DVS28_RS09310 PF01479 S4 domain DVS28_RS09320 PF02153 Prephenate dehydrogenase DVS28_RS09325 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DVS28_RS09330 PF02224 Cytidylate kinase DVS28_RS09335 PF01926 50S ribosome-binding GTPase DVS28_RS09335 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DVS28_RS09360 PF07971 Glycosyl hydrolase family 92 DVS28_RS09360 PF17678 Glycosyl hydrolase family 92 N-terminal domain DVS28_RS09380 PF05175 Methyltransferase small domain DVS28_RS09390 PF00155 Aminotransferase class I and II DVS28_RS09410 PF00005 ABC transporter DVS28_RS09410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DVS28_RS09415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DVS28_RS09415 PF00005 ABC transporter DVS28_RS09420 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS09420 PF12911 N-terminal TM domain of oligopeptide transport permease C DVS28_RS09425 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS09430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DVS28_RS09435 PF01926 50S ribosome-binding GTPase DVS28_RS09445 PF04286 Protein of unknown function (DUF445) DVS28_RS09455 PF13419 Haloacid dehalogenase-like hydrolase DVS28_RS09465 PF00534 Glycosyl transferases group 1 DVS28_RS09465 PF13439 Glycosyltransferase Family 4 DVS28_RS09470 PF07690 Major Facilitator Superfamily DVS28_RS09480 PF05257 CHAP domain DVS28_RS09480 PF01476 LysM domain DVS28_RS09485 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS09485 PF13188 PAS domain DVS28_RS09485 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS09485 PF00563 EAL domain DVS28_RS09490 PF00672 HAMP domain DVS28_RS09490 PF00072 Response regulator receiver domain DVS28_RS09490 PF01627 Hpt domain DVS28_RS09490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS09490 PF17149 Periplasmic sensor domain found in signal transduction proteins DVS28_RS09490 PF00512 His Kinase A (phospho-acceptor) domain DVS28_RS09495 PF01590 GAF domain DVS28_RS09495 PF00360 Phytochrome region DVS28_RS09495 PF00563 EAL domain DVS28_RS09495 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS09500 PF00232 Glycosyl hydrolase family 1 DVS28_RS09505 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS09510 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS09520 PF00356 Bacterial regulatory proteins, lacI family DVS28_RS09535 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS09540 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS09545 PF13416 Bacterial extracellular solute-binding protein DVS28_RS09550 PF00872 Transposase, Mutator family DVS28_RS09565 PF02515 CoA-transferase family III DVS28_RS09570 PF00355 Rieske [2Fe-2S] domain DVS28_RS09570 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DVS28_RS09590 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS09595 PF00005 ABC transporter DVS28_RS09600 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DVS28_RS09610 PF08240 Alcohol dehydrogenase GroES-like domain DVS28_RS09610 PF00107 Zinc-binding dehydrogenase DVS28_RS09620 PF00756 Putative esterase DVS28_RS09620 PF01476 LysM domain DVS28_RS09625 PF16385 Domain of unknown function DVS28_RS09625 PF00884 Sulfatase DVS28_RS09630 PF00756 Putative esterase DVS28_RS09630 PF01476 LysM domain DVS28_RS09640 PF12697 Alpha/beta hydrolase family DVS28_RS09670 PF00665 Integrase core domain DVS28_RS09680 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DVS28_RS09680 PF01610 Transposase DVS28_RS09680 PF13542 Helix-turn-helix domain of transposase family ISL3 DVS28_RS09685 PF00501 AMP-binding enzyme DVS28_RS09685 PF13193 AMP-binding enzyme C-terminal domain DVS28_RS09695 PF00378 Enoyl-CoA hydratase/isomerase DVS28_RS09700 PF00378 Enoyl-CoA hydratase/isomerase DVS28_RS09705 PF00296 Luciferase-like monooxygenase DVS28_RS09710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DVS28_RS09710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DVS28_RS09710 PF02770 Acyl-CoA dehydrogenase, middle domain DVS28_RS09715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DVS28_RS09715 PF02770 Acyl-CoA dehydrogenase, middle domain DVS28_RS09715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DVS28_RS09735 PF00067 Cytochrome P450 DVS28_RS09740 PF00107 Zinc-binding dehydrogenase DVS28_RS09740 PF08240 Alcohol dehydrogenase GroES-like domain DVS28_RS09745 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DVS28_RS09745 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DVS28_RS09745 PF00205 Thiamine pyrophosphate enzyme, central domain DVS28_RS09755 PF00005 ABC transporter DVS28_RS09775 PF01144 Coenzyme A transferase DVS28_RS09790 PF02770 Acyl-CoA dehydrogenase, middle domain DVS28_RS09790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DVS28_RS09790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DVS28_RS09795 PF00501 AMP-binding enzyme DVS28_RS09795 PF13193 AMP-binding enzyme C-terminal domain DVS28_RS09800 PF13193 AMP-binding enzyme C-terminal domain DVS28_RS09800 PF00501 AMP-binding enzyme DVS28_RS09805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DVS28_RS09805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DVS28_RS09805 PF02770 Acyl-CoA dehydrogenase, middle domain DVS28_RS09815 PF00355 Rieske [2Fe-2S] domain DVS28_RS09815 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DVS28_RS09820 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DVS28_RS09820 PF00355 Rieske [2Fe-2S] domain DVS28_RS09830 PF13193 AMP-binding enzyme C-terminal domain DVS28_RS09830 PF00501 AMP-binding enzyme DVS28_RS09835 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DVS28_RS09840 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DVS28_RS09840 PF00355 Rieske [2Fe-2S] domain DVS28_RS09845 PF00866 Ring hydroxylating beta subunit DVS28_RS09855 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS09870 PF00005 ABC transporter DVS28_RS09890 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DVS28_RS09890 PF00355 Rieske [2Fe-2S] domain DVS28_RS09895 PF13607 Succinyl-CoA ligase like flavodoxin domain DVS28_RS09895 PF13380 CoA binding domain DVS28_RS09915 PF01118 Semialdehyde dehydrogenase, NAD binding domain DVS28_RS09915 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation DVS28_RS09920 PF00682 HMGL-like DVS28_RS09920 PF07836 DmpG-like communication domain DVS28_RS09930 PF09339 IclR helix-turn-helix domain DVS28_RS09930 PF01614 Bacterial transcriptional regulator DVS28_RS09970 PF00108 Thiolase, N-terminal domain DVS28_RS09970 PF02803 Thiolase, C-terminal domain DVS28_RS09980 PF01575 MaoC like domain DVS28_RS09985 PF00108 Thiolase, N-terminal domain DVS28_RS09985 PF02803 Thiolase, C-terminal domain DVS28_RS10000 PF00501 AMP-binding enzyme DVS28_RS10015 PF02653 Branched-chain amino acid transport system / permease component DVS28_RS10020 PF00005 ABC transporter DVS28_RS10025 PF00005 ABC transporter DVS28_RS10025 PF12399 Branched-chain amino acid ATP-binding cassette transporter DVS28_RS10030 PF00005 ABC transporter DVS28_RS10035 PF00005 ABC transporter DVS28_RS10035 PF12399 Branched-chain amino acid ATP-binding cassette transporter DVS28_RS10040 PF00501 AMP-binding enzyme DVS28_RS10045 PF02653 Branched-chain amino acid transport system / permease component DVS28_RS10055 PF05138 Phenylacetic acid catabolic protein DVS28_RS10095 PF00378 Enoyl-CoA hydratase/isomerase DVS28_RS10100 PF02770 Acyl-CoA dehydrogenase, middle domain DVS28_RS10100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DVS28_RS10100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DVS28_RS10110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DVS28_RS10110 PF02770 Acyl-CoA dehydrogenase, middle domain DVS28_RS10110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DVS28_RS10120 PF00171 Aldehyde dehydrogenase family DVS28_RS10125 PF02803 Thiolase, C-terminal domain DVS28_RS10125 PF00108 Thiolase, N-terminal domain DVS28_RS10130 PF02515 CoA-transferase family III DVS28_RS10155 PF04542 Sigma-70 region 2 DVS28_RS10155 PF08281 Sigma-70, region 4 DVS28_RS10165 PF07057 DNA helicase TraI DVS28_RS10165 PF18272 single-stranded DNA binding TraI N-terminal subdomain DVS28_RS10165 PF18340 DNA relaxase TraI 2B/2B-like domain DVS28_RS10165 PF08751 TrwC relaxase DVS28_RS10310 PF01066 CDP-alcohol phosphatidyltransferase DVS28_RS10315 PF01597 Glycine cleavage H-protein DVS28_RS10320 PF00498 FHA domain DVS28_RS10325 PF00376 MerR family regulatory protein DVS28_RS10330 PF00768 D-alanyl-D-alanine carboxypeptidase DVS28_RS10330 PF07943 Penicillin-binding protein 5, C-terminal domain DVS28_RS10335 PF02577 Bifunctional nuclease DVS28_RS10355 PF09587 Bacterial capsule synthesis protein PGA_cap DVS28_RS10365 PF00692 dUTPase DVS28_RS10415 PF04239 Protein of unknown function (DUF421) DVS28_RS10435 PF13191 AAA ATPase domain DVS28_RS10435 PF00069 Protein kinase domain DVS28_RS10440 PF03358 NADPH-dependent FMN reductase DVS28_RS10455 PF00171 Aldehyde dehydrogenase family DVS28_RS10460 PF03793 PASTA domain DVS28_RS10460 PF00069 Protein kinase domain DVS28_RS10465 PF13860 FlgD Ig-like domain DVS28_RS10465 PF05922 Peptidase inhibitor I9 DVS28_RS10465 PF00082 Subtilase family DVS28_RS10465 PF02225 PA domain DVS28_RS10470 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DVS28_RS10470 PF00205 Thiamine pyrophosphate enzyme, central domain DVS28_RS10470 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DVS28_RS10480 PF00296 Luciferase-like monooxygenase DVS28_RS10485 PF00484 Carbonic anhydrase DVS28_RS10490 PF00082 Subtilase family DVS28_RS10500 PF02469 Fasciclin domain DVS28_RS10505 PF01168 Alanine racemase, N-terminal domain DVS28_RS10515 PF02469 Fasciclin domain DVS28_RS10530 PF00069 Protein kinase domain DVS28_RS10530 PF13191 AAA ATPase domain DVS28_RS10535 PF12706 Beta-lactamase superfamily domain DVS28_RS10535 PF00753 Metallo-beta-lactamase superfamily DVS28_RS10540 PF04122 Putative cell wall binding repeat 2 DVS28_RS10540 PF01520 N-acetylmuramoyl-L-alanine amidase DVS28_RS10565 PF07690 Major Facilitator Superfamily DVS28_RS10570 PF00581 Rhodanese-like domain DVS28_RS10575 PF04675 DNA ligase N terminus DVS28_RS10575 PF01068 ATP dependent DNA ligase domain DVS28_RS10575 PF04679 ATP dependent DNA ligase C terminal region DVS28_RS10580 PF03167 Uracil DNA glycosylase superfamily DVS28_RS10590 PF04542 Sigma-70 region 2 DVS28_RS10590 PF04545 Sigma-70, region 4 DVS28_RS10595 PF04408 Helicase associated domain (HA2) DVS28_RS10595 PF00270 DEAD/DEAH box helicase DVS28_RS10595 PF08482 ATP-dependent helicase C-terminal DVS28_RS10595 PF00271 Helicase conserved C-terminal domain DVS28_RS10610 PF04228 Putative neutral zinc metallopeptidase DVS28_RS10625 PF07992 Pyridine nucleotide-disulphide oxidoreductase DVS28_RS10640 PF06974 Protein of unknown function (DUF1298) DVS28_RS10640 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain DVS28_RS10645 PF13478 XdhC Rossmann domain DVS28_RS10645 PF02625 XdhC and CoxI family DVS28_RS10670 PF00982 Glycosyltransferase family 20 DVS28_RS10710 PF07690 Major Facilitator Superfamily DVS28_RS10735 PF04542 Sigma-70 region 2 DVS28_RS10735 PF08281 Sigma-70, region 4 DVS28_RS10755 PF00107 Zinc-binding dehydrogenase DVS28_RS10755 PF14765 Polyketide synthase dehydratase DVS28_RS10755 PF16197 Ketoacyl-synthetase C-terminal extension DVS28_RS10755 PF08659 KR domain DVS28_RS10755 PF08240 Alcohol dehydrogenase GroES-like domain DVS28_RS10755 PF00550 Phosphopantetheine attachment site DVS28_RS10755 PF00109 Beta-ketoacyl synthase, N-terminal domain DVS28_RS10755 PF00698 Acyl transferase domain DVS28_RS10755 PF02801 Beta-ketoacyl synthase, C-terminal domain DVS28_RS10760 PF03176 MMPL family DVS28_RS10765 PF07730 Histidine kinase DVS28_RS10765 PF05231 MASE1 DVS28_RS10765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS10770 PF00072 Response regulator receiver domain DVS28_RS10770 PF00196 Bacterial regulatory proteins, luxR family DVS28_RS10810 PF01758 Sodium Bile acid symporter family DVS28_RS10815 PF04122 Putative cell wall binding repeat 2 DVS28_RS10815 PF08486 Stage II sporulation protein DVS28_RS10820 PF03062 MBOAT, membrane-bound O-acyltransferase family DVS28_RS10825 PF01784 NIF3 (NGG1p interacting factor 3) DVS28_RS10835 PF01406 tRNA synthetases class I (C) catalytic domain DVS28_RS10835 PF09190 DALR domain DVS28_RS10860 PF04122 Putative cell wall binding repeat 2 DVS28_RS10860 PF01520 N-acetylmuramoyl-L-alanine amidase DVS28_RS10875 PF00248 Aldo/keto reductase family DVS28_RS10890 PF02734 DAK2 domain DVS28_RS10890 PF02733 Dak1 domain DVS28_RS10895 PF00089 Trypsin DVS28_RS10900 PF00575 S1 RNA binding domain DVS28_RS10900 PF00773 RNB domain DVS28_RS10900 PF08206 Ribonuclease B OB domain DVS28_RS10910 PF01425 Amidase DVS28_RS10930 PF02674 Colicin V production protein DVS28_RS10945 PF01474 Class-II DAHP synthetase family DVS28_RS10950 PF00106 short chain dehydrogenase DVS28_RS10955 PF00171 Aldehyde dehydrogenase family DVS28_RS10965 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DVS28_RS10965 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DVS28_RS10965 PF06827 Zinc finger found in FPG and IleRS DVS28_RS10975 PF00574 Clp protease DVS28_RS10990 PF00890 FAD binding domain DVS28_RS10990 PF02910 Fumarate reductase flavoprotein C-term DVS28_RS10995 PF17862 AAA+ lid domain DVS28_RS10995 PF06480 FtsH Extracellular DVS28_RS10995 PF01434 Peptidase family M41 DVS28_RS10995 PF00004 ATPase family associated with various cellular activities (AAA) DVS28_RS11005 PF04715 Anthranilate synthase component I, N terminal region DVS28_RS11005 PF00425 chorismate binding enzyme DVS28_RS11015 PF01923 Cobalamin adenosyltransferase DVS28_RS11020 PF01497 Periplasmic binding protein DVS28_RS11025 PF02548 Ketopantoate hydroxymethyltransferase DVS28_RS11030 PF02872 5'-nucleotidase, C-terminal domain DVS28_RS11030 PF00149 Calcineurin-like phosphoesterase DVS28_RS11035 PF02580 D-Tyr-tRNA(Tyr) deacylase DVS28_RS11040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS11040 PF08446 PAS fold DVS28_RS11040 PF00512 His Kinase A (phospho-acceptor) domain DVS28_RS11040 PF00360 Phytochrome region DVS28_RS11040 PF01590 GAF domain DVS28_RS11045 PF00909 Ammonium Transporter Family DVS28_RS11050 PF03951 Glutamine synthetase, beta-Grasp domain DVS28_RS11050 PF00120 Glutamine synthetase, catalytic domain DVS28_RS11055 PF08335 GlnD PII-uridylyltransferase DVS28_RS11055 PF03710 Glutamate-ammonia ligase adenylyltransferase DVS28_RS11065 PF18030 RimK PreATP-grasp domain DVS28_RS11065 PF08443 RimK-like ATP-grasp domain DVS28_RS11070 PF00089 Trypsin DVS28_RS11085 PF03951 Glutamine synthetase, beta-Grasp domain DVS28_RS11085 PF00120 Glutamine synthetase, catalytic domain DVS28_RS11100 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS11100 PF00563 EAL domain DVS28_RS11100 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS11105 PF01370 NAD dependent epimerase/dehydratase family DVS28_RS11120 PF13439 Glycosyltransferase Family 4 DVS28_RS11170 PF00561 alpha/beta hydrolase fold DVS28_RS11185 PF00120 Glutamine synthetase, catalytic domain DVS28_RS11185 PF03951 Glutamine synthetase, beta-Grasp domain DVS28_RS11195 PF00924 Mechanosensitive ion channel DVS28_RS11205 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DVS28_RS11205 PF04055 Radical SAM superfamily DVS28_RS11210 PF03099 Biotin/lipoate A/B protein ligase family DVS28_RS11215 PF04539 Sigma-70 region 3 DVS28_RS11215 PF04542 Sigma-70 region 2 DVS28_RS11215 PF04545 Sigma-70, region 4 DVS28_RS11220 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DVS28_RS11220 PF02817 e3 binding domain DVS28_RS11220 PF00364 Biotin-requiring enzyme DVS28_RS11225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DVS28_RS11225 PF07992 Pyridine nucleotide-disulphide oxidoreductase DVS28_RS11230 PF08669 Glycine cleavage T-protein C-terminal barrel domain DVS28_RS11230 PF01571 Aminomethyltransferase folate-binding domain DVS28_RS11235 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family DVS28_RS11250 PF02445 Quinolinate synthetase A protein DVS28_RS11255 PF02595 Glycerate kinase family DVS28_RS11270 PF01521 Iron-sulphur cluster biosynthesis DVS28_RS11280 PF00266 Aminotransferase class-V DVS28_RS11285 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DVS28_RS11285 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DVS28_RS11285 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DVS28_RS11290 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DVS28_RS11300 PF00591 Glycosyl transferase family, a/b domain DVS28_RS11300 PF02885 Glycosyl transferase family, helical bundle domain DVS28_RS11315 PF01695 IstB-like ATP binding protein DVS28_RS11335 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS11340 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS11340 PF12911 N-terminal TM domain of oligopeptide transport permease C DVS28_RS11345 PF00005 ABC transporter DVS28_RS11345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DVS28_RS11350 PF00005 ABC transporter DVS28_RS11350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DVS28_RS11355 PF01541 GIY-YIG catalytic domain DVS28_RS11355 PF00929 Exonuclease DVS28_RS11365 PF00248 Aldo/keto reductase family DVS28_RS11370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DVS28_RS11370 PF07992 Pyridine nucleotide-disulphide oxidoreductase DVS28_RS11370 PF00403 Heavy-metal-associated domain DVS28_RS11380 PF00072 Response regulator receiver domain DVS28_RS11385 PF00486 Transcriptional regulatory protein, C terminal DVS28_RS11385 PF00072 Response regulator receiver domain DVS28_RS11390 PF03441 FAD binding domain of DNA photolyase DVS28_RS11390 PF00875 DNA photolyase DVS28_RS11405 PF01435 Peptidase family M48 DVS28_RS11405 PF16491 CAAX prenyl protease N-terminal, five membrane helices DVS28_RS11410 PF13439 Glycosyltransferase Family 4 DVS28_RS11410 PF00534 Glycosyl transferases group 1 DVS28_RS11430 PF01061 ABC-2 type transporter DVS28_RS11435 PF00005 ABC transporter DVS28_RS11435 PF13732 Domain of unknown function (DUF4162) DVS28_RS11445 PF00571 CBS domain DVS28_RS11445 PF00478 IMP dehydrogenase / GMP reductase domain DVS28_RS11460 PF08264 Anticodon-binding domain of tRNA DVS28_RS11460 PF00133 tRNA synthetases class I (I, L, M and V) DVS28_RS11460 PF13603 Leucyl-tRNA synthetase, Domain 2 DVS28_RS11460 PF09334 tRNA synthetases class I (M) DVS28_RS11465 PF00005 ABC transporter DVS28_RS11470 PF01590 GAF domain DVS28_RS11470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS11470 PF00512 His Kinase A (phospho-acceptor) domain DVS28_RS11470 PF08446 PAS fold DVS28_RS11470 PF00360 Phytochrome region DVS28_RS11475 PF01431 Peptidase family M13 DVS28_RS11475 PF05649 Peptidase family M13 DVS28_RS11500 PF00248 Aldo/keto reductase family DVS28_RS11505 PF00753 Metallo-beta-lactamase superfamily DVS28_RS11520 PF00128 Alpha amylase, catalytic domain DVS28_RS11520 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DVS28_RS11525 PF00128 Alpha amylase, catalytic domain DVS28_RS11530 PF11941 Domain of unknown function (DUF3459) DVS28_RS11530 PF00128 Alpha amylase, catalytic domain DVS28_RS11540 PF00128 Alpha amylase, catalytic domain DVS28_RS11540 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DVS28_RS11545 PF00128 Alpha amylase, catalytic domain DVS28_RS11555 PF00534 Glycosyl transferases group 1 DVS28_RS11555 PF13439 Glycosyltransferase Family 4 DVS28_RS11560 PF12697 Alpha/beta hydrolase family DVS28_RS11565 PF01063 Amino-transferase class IV DVS28_RS11570 PF01370 NAD dependent epimerase/dehydratase family DVS28_RS11570 PF08338 Domain of unknown function (DUF1731) DVS28_RS11585 PF00072 Response regulator receiver domain DVS28_RS11585 PF03861 ANTAR domain DVS28_RS11590 PF06722 Protein of unknown function (DUF1205) DVS28_RS11595 PF00005 ABC transporter DVS28_RS11600 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS11605 PF00497 Bacterial extracellular solute-binding proteins, family 3 DVS28_RS11610 PF00497 Bacterial extracellular solute-binding proteins, family 3 DVS28_RS11615 PF02653 Branched-chain amino acid transport system / permease component DVS28_RS11625 PF00005 ABC transporter DVS28_RS11625 PF12399 Branched-chain amino acid ATP-binding cassette transporter DVS28_RS11630 PF00005 ABC transporter DVS28_RS11640 PF00210 Ferritin-like domain DVS28_RS11655 PF01032 FecCD transport family DVS28_RS11660 PF00005 ABC transporter DVS28_RS11665 PF07685 CobB/CobQ-like glutamine amidotransferase domain DVS28_RS11665 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DVS28_RS11670 PF00490 Delta-aminolevulinic acid dehydratase DVS28_RS11680 PF01497 Periplasmic binding protein DVS28_RS11690 PF09055 Nickel-containing superoxide dismutase DVS28_RS11695 PF01575 MaoC like domain DVS28_RS11700 PF13458 Periplasmic binding protein DVS28_RS11705 PF00476 DNA polymerase family A DVS28_RS11705 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DVS28_RS11705 PF01367 5'-3' exonuclease, C-terminal SAM fold DVS28_RS11710 PF01053 Cys/Met metabolism PLP-dependent enzyme DVS28_RS11725 PF00575 S1 RNA binding domain DVS28_RS11740 PF01121 Dephospho-CoA kinase DVS28_RS11745 PF00999 Sodium/hydrogen exchanger family DVS28_RS11755 PF00196 Bacterial regulatory proteins, luxR family DVS28_RS11755 PF00072 Response regulator receiver domain DVS28_RS11760 PF13426 PAS domain DVS28_RS11760 PF00512 His Kinase A (phospho-acceptor) domain DVS28_RS11760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS11760 PF00672 HAMP domain DVS28_RS11765 PF04055 Radical SAM superfamily DVS28_RS11765 PF06463 Molybdenum Cofactor Synthesis C DVS28_RS11780 PF01575 MaoC like domain DVS28_RS11785 PF01799 [2Fe-2S] binding domain DVS28_RS11785 PF00111 2Fe-2S iron-sulfur cluster binding domain DVS28_RS11790 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DVS28_RS11790 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DVS28_RS11795 PF03450 CO dehydrogenase flavoprotein C-terminal domain DVS28_RS11795 PF00941 FAD binding domain in molybdopterin dehydrogenase DVS28_RS11800 PF01434 Peptidase family M41 DVS28_RS11800 PF06480 FtsH Extracellular DVS28_RS11800 PF00004 ATPase family associated with various cellular activities (AAA) DVS28_RS11800 PF17862 AAA+ lid domain DVS28_RS11810 PF13478 XdhC Rossmann domain DVS28_RS11810 PF02625 XdhC and CoxI family DVS28_RS11815 PF12804 MobA-like NTP transferase domain DVS28_RS11825 PF13559 Domain of unknown function (DUF4129) DVS28_RS11825 PF11992 Domain of unknown function (DUF3488) DVS28_RS11825 PF01841 Transglutaminase-like superfamily DVS28_RS11835 PF07726 ATPase family associated with various cellular activities (AAA) DVS28_RS11835 PF17863 AAA lid domain DVS28_RS11845 PF00378 Enoyl-CoA hydratase/isomerase DVS28_RS11850 PF04542 Sigma-70 region 2 DVS28_RS11850 PF08281 Sigma-70, region 4 DVS28_RS11865 PF12344 Ultra-violet resistance protein B DVS28_RS11865 PF17757 UvrB interaction domain DVS28_RS11865 PF02151 UvrB/uvrC motif DVS28_RS11865 PF04851 Type III restriction enzyme, res subunit DVS28_RS11865 PF00271 Helicase conserved C-terminal domain DVS28_RS11875 PF00082 Subtilase family DVS28_RS11875 PF01483 Proprotein convertase P-domain DVS28_RS11885 PF01906 Putative heavy-metal-binding DVS28_RS11890 PF01906 Putative heavy-metal-binding DVS28_RS11900 PF01451 Low molecular weight phosphotyrosine protein phosphatase DVS28_RS11905 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DVS28_RS11910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DVS28_RS11910 PF12806 Acetyl-CoA dehydrogenase C-terminal like DVS28_RS11910 PF02770 Acyl-CoA dehydrogenase, middle domain DVS28_RS11910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DVS28_RS11915 PF03741 Integral membrane protein TerC family DVS28_RS11920 PF04073 Aminoacyl-tRNA editing domain DVS28_RS11925 PF00378 Enoyl-CoA hydratase/isomerase DVS28_RS11940 PF02779 Transketolase, pyrimidine binding domain DVS28_RS11940 PF02780 Transketolase, C-terminal domain DVS28_RS11945 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal DVS28_RS11945 PF00676 Dehydrogenase E1 component DVS28_RS11950 PF08534 Redoxin DVS28_RS11960 PF00107 Zinc-binding dehydrogenase DVS28_RS11960 PF08240 Alcohol dehydrogenase GroES-like domain DVS28_RS11960 PF13823 Alcohol dehydrogenase GroES-associated DVS28_RS11965 PF13520 Amino acid permease DVS28_RS11970 PF00270 DEAD/DEAH box helicase DVS28_RS11970 PF00570 HRDC domain DVS28_RS11970 PF16124 RecQ zinc-binding DVS28_RS11970 PF09382 RQC domain DVS28_RS11970 PF00271 Helicase conserved C-terminal domain DVS28_RS11995 PF00872 Transposase, Mutator family DVS28_RS12025 PF05425 Copper resistance protein D DVS28_RS12040 PF01545 Cation efflux family DVS28_RS12055 PF02683 Cytochrome C biogenesis protein transmembrane region DVS28_RS12065 PF03965 Penicillinase repressor DVS28_RS12095 PF05425 Copper resistance protein D DVS28_RS12100 PF00005 ABC transporter DVS28_RS12110 PF01578 Cytochrome C assembly protein DVS28_RS12115 PF03100 CcmE DVS28_RS12120 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DVS28_RS12120 PF01578 Cytochrome C assembly protein DVS28_RS12125 PF08534 Redoxin DVS28_RS12140 PF00361 Proton-conducting membrane transporter DVS28_RS12145 PF00361 Proton-conducting membrane transporter DVS28_RS12150 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DVS28_RS12150 PF00361 Proton-conducting membrane transporter DVS28_RS12150 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus DVS28_RS12155 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DVS28_RS12160 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DVS28_RS12165 PF00146 NADH dehydrogenase DVS28_RS12170 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DVS28_RS12175 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DVS28_RS12205 PF00403 Heavy-metal-associated domain DVS28_RS12210 PF01252 Signal peptidase (SPase) II DVS28_RS12215 PF00067 Cytochrome P450 DVS28_RS12220 PF01209 ubiE/COQ5 methyltransferase family DVS28_RS12230 PF07992 Pyridine nucleotide-disulphide oxidoreductase DVS28_RS12230 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DVS28_RS12235 PF13411 MerR HTH family regulatory protein DVS28_RS12250 PF08534 Redoxin DVS28_RS12255 PF00561 alpha/beta hydrolase fold DVS28_RS12270 PF17841 BID domain of Bartonella effector protein (Bep) DVS28_RS12270 PF03389 MobA/MobL family DVS28_RS12270 PF01443 Viral (Superfamily 1) RNA helicase DVS28_RS12325 PF00196 Bacterial regulatory proteins, luxR family DVS28_RS12335 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP DVS28_RS12335 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DVS28_RS12340 PF00753 Metallo-beta-lactamase superfamily DVS28_RS12350 PF00005 ABC transporter DVS28_RS12350 PF17755 UvrA DNA-binding domain DVS28_RS12350 PF17760 UvrA interaction domain DVS28_RS12360 PF08962 Domain of unknown function (DUF1876) DVS28_RS12375 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS12380 PF01547 Bacterial extracellular solute-binding protein DVS28_RS12400 PF01370 NAD dependent epimerase/dehydratase family DVS28_RS12405 PF08402 TOBE domain DVS28_RS12405 PF00005 ABC transporter DVS28_RS12410 PF08459 UvrC Helix-hairpin-helix N-terminal DVS28_RS12410 PF01541 GIY-YIG catalytic domain DVS28_RS12410 PF02151 UvrB/uvrC motif DVS28_RS12415 PF03668 P-loop ATPase protein family DVS28_RS12420 PF01933 Uncharacterised protein family UPF0052 DVS28_RS12425 PF02650 WhiA C-terminal HTH domain DVS28_RS12425 PF14527 WhiA LAGLIDADG-like domain DVS28_RS12425 PF10298 WhiA N-terminal LAGLIDADG-like domain DVS28_RS12430 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DVS28_RS12430 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DVS28_RS12435 PF00162 Phosphoglycerate kinase DVS28_RS12440 PF00121 Triosephosphate isomerase DVS28_RS12445 PF03965 Penicillinase repressor DVS28_RS12450 PF01435 Peptidase family M48 DVS28_RS12460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DVS28_RS12465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DVS28_RS12470 PF02503 Polyphosphate kinase middle domain DVS28_RS12470 PF17941 Polyphosphate kinase C-terminal domain 1 DVS28_RS12470 PF13089 Polyphosphate kinase N-terminal domain DVS28_RS12470 PF13090 Polyphosphate kinase C-terminal domain 2 DVS28_RS12485 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS12485 PF00563 EAL domain DVS28_RS12485 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS12490 PF02770 Acyl-CoA dehydrogenase, middle domain DVS28_RS12490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DVS28_RS12490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DVS28_RS12495 PF01434 Peptidase family M41 DVS28_RS12495 PF00004 ATPase family associated with various cellular activities (AAA) DVS28_RS12495 PF17862 AAA+ lid domain DVS28_RS12495 PF06480 FtsH Extracellular DVS28_RS12520 PF09587 Bacterial capsule synthesis protein PGA_cap DVS28_RS12545 PF00196 Bacterial regulatory proteins, luxR family DVS28_RS12545 PF00072 Response regulator receiver domain DVS28_RS12570 PF00581 Rhodanese-like domain DVS28_RS12580 PF07992 Pyridine nucleotide-disulphide oxidoreductase DVS28_RS12580 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DVS28_RS12605 PF00753 Metallo-beta-lactamase superfamily DVS28_RS12625 PF02597 ThiS family DVS28_RS12630 PF01171 PP-loop family DVS28_RS12635 PF08704 tRNA methyltransferase complex GCD14 subunit DVS28_RS12640 PF00082 Subtilase family DVS28_RS12645 PF16450 Proteasomal ATPase OB C-terminal domain DVS28_RS12645 PF17758 Proteasomal ATPase OB N-terminal domain DVS28_RS12645 PF00004 ATPase family associated with various cellular activities (AAA) DVS28_RS12650 PF00781 Diacylglycerol kinase catalytic domain DVS28_RS12665 PF03136 Pup-ligase protein DVS28_RS12670 PF00128 Alpha amylase, catalytic domain DVS28_RS12680 PF00227 Proteasome subunit DVS28_RS12685 PF00227 Proteasome subunit DVS28_RS12690 PF13191 AAA ATPase domain DVS28_RS12690 PF00069 Protein kinase domain DVS28_RS12695 PF03136 Pup-ligase protein DVS28_RS12710 PF13847 Methyltransferase domain DVS28_RS12715 PF00905 Penicillin binding protein transpeptidase domain DVS28_RS12715 PF00912 Transglycosylase DVS28_RS12720 PF13280 WYL domain DVS28_RS12735 PF02416 mttA/Hcf106 family DVS28_RS12740 PF00902 Sec-independent protein translocase protein (TatC) DVS28_RS12745 PF08148 DSHCT (NUC185) domain DVS28_RS12745 PF00270 DEAD/DEAH box helicase DVS28_RS12745 PF00271 Helicase conserved C-terminal domain DVS28_RS12750 PF02690 Na+/Pi-cotransporter DVS28_RS12760 PF02574 Homocysteine S-methyltransferase DVS28_RS12760 PF02219 Methylenetetrahydrofolate reductase DVS28_RS12765 PF00781 Diacylglycerol kinase catalytic domain DVS28_RS12770 PF03186 CobD/Cbib protein DVS28_RS12775 PF00857 Isochorismatase family DVS28_RS12780 PF02538 Hydantoinase B/oxoprolinase DVS28_RS12785 PF01968 Hydantoinase/oxoprolinase DVS28_RS12785 PF05378 Hydantoinase/oxoprolinase N-terminal region DVS28_RS12790 PF02515 CoA-transferase family III DVS28_RS12795 PF07729 FCD domain DVS28_RS12795 PF00392 Bacterial regulatory proteins, gntR family DVS28_RS12800 PF00682 HMGL-like DVS28_RS12805 PF00155 Aminotransferase class I and II DVS28_RS12815 PF00155 Aminotransferase class I and II DVS28_RS12820 PF02277 Phosphoribosyltransferase DVS28_RS12835 PF14685 Tricorn protease PDZ domain DVS28_RS12835 PF14684 Tricorn protease C1 domain DVS28_RS12835 PF03572 Peptidase family S41 DVS28_RS12835 PF07676 WD40-like Beta Propeller Repeat DVS28_RS12845 PF00253 Ribosomal protein S14p/S29e DVS28_RS12850 PF01321 Creatinase/Prolidase N-terminal domain DVS28_RS12850 PF00557 Metallopeptidase family M24 DVS28_RS12860 PF00075 RNase H DVS28_RS12865 PF07969 Amidohydrolase family DVS28_RS12880 PF00795 Carbon-nitrogen hydrolase DVS28_RS12885 PF01197 Ribosomal protein L31 DVS28_RS12890 PF00471 Ribosomal protein L33 DVS28_RS12895 PF00830 Ribosomal L28 family DVS28_RS12920 PF00270 DEAD/DEAH box helicase DVS28_RS12920 PF00271 Helicase conserved C-terminal domain DVS28_RS12925 PF01544 CorA-like Mg2+ transporter protein DVS28_RS12930 PF01180 Dihydroorotate dehydrogenase DVS28_RS12935 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DVS28_RS12935 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DVS28_RS12970 PF07687 Peptidase dimerisation domain DVS28_RS12970 PF01546 Peptidase family M20/M25/M40 DVS28_RS12980 PF00265 Thymidine kinase DVS28_RS12990 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DVS28_RS12990 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DVS28_RS12995 PF00550 Phosphopantetheine attachment site DVS28_RS13000 PF02801 Beta-ketoacyl synthase, C-terminal domain DVS28_RS13000 PF00109 Beta-ketoacyl synthase, N-terminal domain DVS28_RS13005 PF01039 Carboxyl transferase domain DVS28_RS13015 PF01734 Patatin-like phospholipase DVS28_RS13020 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DVS28_RS13030 PF00743 Flavin-binding monooxygenase-like DVS28_RS13035 PF01979 Amidohydrolase family DVS28_RS13040 PF16658 Class II release factor RF3, C-terminal domain DVS28_RS13040 PF00009 Elongation factor Tu GTP binding domain DVS28_RS13045 PF07690 Major Facilitator Superfamily DVS28_RS13060 PF00719 Inorganic pyrophosphatase DVS28_RS13065 PF11898 Domain of unknown function (DUF3418) DVS28_RS13065 PF00270 DEAD/DEAH box helicase DVS28_RS13065 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DVS28_RS13065 PF00271 Helicase conserved C-terminal domain DVS28_RS13065 PF04408 Helicase associated domain (HA2) DVS28_RS13075 PF06974 Protein of unknown function (DUF1298) DVS28_RS13075 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain DVS28_RS13095 PF01575 MaoC like domain DVS28_RS13115 PF01053 Cys/Met metabolism PLP-dependent enzyme DVS28_RS13120 PF04204 Homoserine O-succinyltransferase DVS28_RS13135 PF00390 Malic enzyme, N-terminal domain DVS28_RS13135 PF03949 Malic enzyme, NAD binding domain DVS28_RS13145 PF02678 Pirin DVS28_RS13145 PF05726 Pirin C-terminal cupin domain DVS28_RS13150 PF01032 FecCD transport family DVS28_RS13155 PF01032 FecCD transport family DVS28_RS13160 PF00005 ABC transporter DVS28_RS13170 PF01497 Periplasmic binding protein DVS28_RS13175 PF00571 CBS domain DVS28_RS13185 PF03009 Glycerophosphoryl diester phosphodiesterase family DVS28_RS13190 PF07992 Pyridine nucleotide-disulphide oxidoreductase DVS28_RS13205 PF09335 SNARE associated Golgi protein DVS28_RS13230 PF01925 Sulfite exporter TauE/SafE DVS28_RS13240 PF00753 Metallo-beta-lactamase superfamily DVS28_RS13250 PF00893 Small Multidrug Resistance protein DVS28_RS13265 PF07728 AAA domain (dynein-related subfamily) DVS28_RS13275 PF05762 VWA domain containing CoxE-like protein DVS28_RS13290 PF00291 Pyridoxal-phosphate dependent enzyme DVS28_RS13290 PF14821 Threonine synthase N terminus DVS28_RS13305 PF00255 Glutathione peroxidase DVS28_RS13310 PF00571 CBS domain DVS28_RS13310 PF03471 Transporter associated domain DVS28_RS13310 PF01595 Cyclin M transmembrane N-terminal domain DVS28_RS13320 PF00171 Aldehyde dehydrogenase family DVS28_RS13325 PF00069 Protein kinase domain DVS28_RS13330 PF05661 Protein of unknown function (DUF808) DVS28_RS13335 PF00135 Carboxylesterase family DVS28_RS13340 PF00557 Metallopeptidase family M24 DVS28_RS13370 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DVS28_RS13370 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DVS28_RS13375 PF01676 Metalloenzyme superfamily DVS28_RS13375 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase DVS28_RS13385 PF00069 Protein kinase domain DVS28_RS13385 PF03793 PASTA domain DVS28_RS13390 PF03853 YjeF-related protein N-terminus DVS28_RS13395 PF04542 Sigma-70 region 2 DVS28_RS13395 PF04545 Sigma-70, region 4 DVS28_RS13410 PF08768 Domain of unknown function (DUF1794) DVS28_RS13415 PF00005 ABC transporter DVS28_RS13420 PF12399 Branched-chain amino acid ATP-binding cassette transporter DVS28_RS13420 PF00005 ABC transporter DVS28_RS13425 PF00501 AMP-binding enzyme DVS28_RS13430 PF02653 Branched-chain amino acid transport system / permease component DVS28_RS13435 PF11862 Domain of unknown function (DUF3382) DVS28_RS13435 PF02653 Branched-chain amino acid transport system / permease component DVS28_RS13445 PF00483 Nucleotidyl transferase DVS28_RS13450 PF00128 Alpha amylase, catalytic domain DVS28_RS13455 PF01547 Bacterial extracellular solute-binding protein DVS28_RS13460 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS13465 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS13470 PF01266 FAD dependent oxidoreductase DVS28_RS13470 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DVS28_RS13495 PF00440 Bacterial regulatory proteins, tetR family DVS28_RS13495 PF08362 YcdC-like protein, C-terminal region DVS28_RS13500 PF00005 ABC transporter DVS28_RS13500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DVS28_RS13505 PF00005 ABC transporter DVS28_RS13505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DVS28_RS13510 PF12911 N-terminal TM domain of oligopeptide transport permease C DVS28_RS13510 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS13515 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS13520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DVS28_RS13525 PF07726 ATPase family associated with various cellular activities (AAA) DVS28_RS13525 PF17863 AAA lid domain DVS28_RS13535 PF01841 Transglutaminase-like superfamily DVS28_RS13535 PF13559 Domain of unknown function (DUF4129) DVS28_RS13535 PF11992 Domain of unknown function (DUF3488) DVS28_RS13540 PF00248 Aldo/keto reductase family DVS28_RS13545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DVS28_RS13545 PF03466 LysR substrate binding domain DVS28_RS13555 PF00378 Enoyl-CoA hydratase/isomerase DVS28_RS13560 PF00817 impB/mucB/samB family DVS28_RS13560 PF11798 IMS family HHH motif DVS28_RS13560 PF11799 impB/mucB/samB family C-terminal domain DVS28_RS13565 PF00512 His Kinase A (phospho-acceptor) domain DVS28_RS13565 PF02702 Osmosensitive K+ channel His kinase sensor domain DVS28_RS13565 PF00582 Universal stress protein family DVS28_RS13565 PF13493 Domain of unknown function (DUF4118) DVS28_RS13565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS13575 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DVS28_RS13575 PF02811 PHP domain DVS28_RS13575 PF14579 Helix-hairpin-helix motif DVS28_RS13575 PF07733 Bacterial DNA polymerase III alpha NTPase domain DVS28_RS13580 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS13580 PF00563 EAL domain DVS28_RS13580 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS13585 PF03167 Uracil DNA glycosylase superfamily DVS28_RS13595 PF00072 Response regulator receiver domain DVS28_RS13595 PF03861 ANTAR domain DVS28_RS13600 PF01612 3'-5' exonuclease DVS28_RS13600 PF00476 DNA polymerase family A DVS28_RS13600 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DVS28_RS13600 PF01367 5'-3' exonuclease, C-terminal SAM fold DVS28_RS13605 PF05544 Proline racemase DVS28_RS13610 PF00171 Aldehyde dehydrogenase family DVS28_RS13640 PF00456 Transketolase, thiamine diphosphate binding domain DVS28_RS13640 PF17831 Pyruvate dehydrogenase E1 component middle domain DVS28_RS13645 PF00378 Enoyl-CoA hydratase/isomerase DVS28_RS13660 PF01274 Malate synthase DVS28_RS13680 PF02585 GlcNAc-PI de-N-acetylase DVS28_RS13690 PF00202 Aminotransferase class-III DVS28_RS13715 PF02581 Thiamine monophosphate synthase DVS28_RS13715 PF17792 ThiD2 family DVS28_RS13725 PF05690 Thiazole biosynthesis protein ThiG DVS28_RS13735 PF01266 FAD dependent oxidoreductase DVS28_RS13740 PF00072 Response regulator receiver domain DVS28_RS13740 PF00486 Transcriptional regulatory protein, C terminal DVS28_RS13745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS13750 PF03793 PASTA domain DVS28_RS13750 PF00069 Protein kinase domain DVS28_RS13765 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DVS28_RS13765 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain DVS28_RS13765 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DVS28_RS13770 PF00072 Response regulator receiver domain DVS28_RS13775 PF00174 Oxidoreductase molybdopterin binding domain DVS28_RS13780 PF01212 Beta-eliminating lyase DVS28_RS13785 PF00365 Phosphofructokinase DVS28_RS13790 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DVS28_RS13790 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DVS28_RS13820 PF12146 Serine aminopeptidase, S33 DVS28_RS13830 PF00480 ROK family DVS28_RS13845 PF17886 HSP20-like domain found in ArsA DVS28_RS13845 PF02374 Anion-transporting ATPase DVS28_RS13865 PF01694 Rhomboid family DVS28_RS13875 PF02585 GlcNAc-PI de-N-acetylase DVS28_RS13885 PF00561 alpha/beta hydrolase fold DVS28_RS13890 PF06778 Chlorite dismutase DVS28_RS13895 PF00216 Bacterial DNA-binding protein DVS28_RS13910 PF13419 Haloacid dehalogenase-like hydrolase DVS28_RS13920 PF01425 Amidase DVS28_RS13930 PF00106 short chain dehydrogenase DVS28_RS13935 PF00310 Glutamine amidotransferases class-II DVS28_RS13935 PF01645 Conserved region in glutamate synthase DVS28_RS13935 PF01493 GXGXG motif DVS28_RS13935 PF04898 Glutamate synthase central domain DVS28_RS13940 PF01476 LysM domain DVS28_RS13940 PF06737 Transglycosylase-like domain DVS28_RS13945 PF03976 Polyphosphate kinase 2 (PPK2) DVS28_RS13955 PF00005 ABC transporter DVS28_RS13955 PF00664 ABC transporter transmembrane region DVS28_RS13960 PF12848 ABC transporter DVS28_RS13960 PF00005 ABC transporter DVS28_RS13960 PF16326 ABC transporter C-terminal domain DVS28_RS13975 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DVS28_RS13975 PF00205 Thiamine pyrophosphate enzyme, central domain DVS28_RS13975 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DVS28_RS13985 PF00171 Aldehyde dehydrogenase family DVS28_RS13990 PF00202 Aminotransferase class-III DVS28_RS13995 PF01037 Lrp/AsnC ligand binding domain DVS28_RS14010 PF16657 Maltogenic Amylase, C-terminal domain DVS28_RS14010 PF00128 Alpha amylase, catalytic domain DVS28_RS14015 PF00343 Carbohydrate phosphorylase DVS28_RS14015 PF11897 Protein of unknown function (DUF3417) DVS28_RS14020 PF11896 Domain of unknown function (DUF3416) DVS28_RS14025 PF00128 Alpha amylase, catalytic domain DVS28_RS14025 PF16657 Maltogenic Amylase, C-terminal domain DVS28_RS14030 PF00128 Alpha amylase, catalytic domain DVS28_RS14030 PF02806 Alpha amylase, C-terminal all-beta domain DVS28_RS14030 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DVS28_RS14035 PF00290 Tryptophan synthase alpha chain DVS28_RS14040 PF00291 Pyridoxal-phosphate dependent enzyme DVS28_RS14045 PF00218 Indole-3-glycerol phosphate synthase DVS28_RS14050 PF02541 Ppx/GppA phosphatase family DVS28_RS14060 PF00425 chorismate binding enzyme DVS28_RS14060 PF04715 Anthranilate synthase component I, N terminal region DVS28_RS14065 PF01502 Phosphoribosyl-AMP cyclohydrolase DVS28_RS14100 PF04122 Putative cell wall binding repeat 2 DVS28_RS14100 PF08486 Stage II sporulation protein DVS28_RS14110 PF04122 Putative cell wall binding repeat 2 DVS28_RS14110 PF01520 N-acetylmuramoyl-L-alanine amidase DVS28_RS14120 PF00977 Histidine biosynthesis protein DVS28_RS14125 PF00977 Histidine biosynthesis protein DVS28_RS14130 PF00117 Glutamine amidotransferase class-I DVS28_RS14135 PF00475 Imidazoleglycerol-phosphate dehydratase DVS28_RS14140 PF00155 Aminotransferase class I and II DVS28_RS14145 PF00815 Histidinol dehydrogenase DVS28_RS14155 PF03352 Methyladenine glycosylase DVS28_RS14155 PF13302 Acetyltransferase (GNAT) domain DVS28_RS14155 PF13673 Acetyltransferase (GNAT) domain DVS28_RS14155 PF00117 Glutamine amidotransferase class-I DVS28_RS14155 PF00958 GMP synthase C terminal domain DVS28_RS14160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS14160 PF00512 His Kinase A (phospho-acceptor) domain DVS28_RS14170 PF01743 Poly A polymerase head domain DVS28_RS14170 PF00571 CBS domain DVS28_RS14175 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DVS28_RS14175 PF07733 Bacterial DNA polymerase III alpha NTPase domain DVS28_RS14175 PF14579 Helix-hairpin-helix motif DVS28_RS14175 PF02811 PHP domain DVS28_RS14180 PF01053 Cys/Met metabolism PLP-dependent enzyme DVS28_RS14185 PF01037 Lrp/AsnC ligand binding domain DVS28_RS14195 PF09186 Domain of unknown function (DUF1949) DVS28_RS14195 PF01205 Uncharacterized protein family UPF0029 DVS28_RS14205 PF03435 Saccharopine dehydrogenase NADP binding domain DVS28_RS14215 PF00849 RNA pseudouridylate synthase DVS28_RS14220 PF01252 Signal peptidase (SPase) II DVS28_RS14315 PF08241 Methyltransferase domain DVS28_RS14365 PF00578 AhpC/TSA family DVS28_RS14380 PF00872 Transposase, Mutator family DVS28_RS14385 PF00005 ABC transporter DVS28_RS14405 PF01695 IstB-like ATP binding protein DVS28_RS14465 PF08264 Anticodon-binding domain of tRNA DVS28_RS14465 PF00133 tRNA synthetases class I (I, L, M and V) DVS28_RS14485 PF05103 DivIVA protein DVS28_RS14495 PF04472 Cell division protein SepF DVS28_RS14500 PF01168 Alanine racemase, N-terminal domain DVS28_RS14505 PF02578 Multi-copper polyphenol oxidoreductase laccase DVS28_RS14510 PF00091 Tubulin/FtsZ family, GTPase domain DVS28_RS14510 PF12327 FtsZ family, C-terminal domain DVS28_RS14520 PF08478 POTRA domain, FtsQ-type DVS28_RS14525 PF01565 FAD binding domain DVS28_RS14525 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DVS28_RS14530 PF01225 Mur ligase family, catalytic domain DVS28_RS14530 PF02875 Mur ligase family, glutamate ligase domain DVS28_RS14530 PF08245 Mur ligase middle domain DVS28_RS14535 PF03033 Glycosyltransferase family 28 N-terminal domain DVS28_RS14535 PF04101 Glycosyltransferase family 28 C-terminal domain DVS28_RS14540 PF01098 Cell cycle protein DVS28_RS14545 PF08245 Mur ligase middle domain DVS28_RS14550 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DVS28_RS14550 PF00953 Glycosyl transferase family 4 DVS28_RS14555 PF02875 Mur ligase family, glutamate ligase domain DVS28_RS14555 PF08245 Mur ligase middle domain DVS28_RS14555 PF01225 Mur ligase family, catalytic domain DVS28_RS14560 PF08245 Mur ligase middle domain DVS28_RS14560 PF02875 Mur ligase family, glutamate ligase domain DVS28_RS14560 PF01225 Mur ligase family, catalytic domain DVS28_RS14565 PF00905 Penicillin binding protein transpeptidase domain DVS28_RS14565 PF03717 Penicillin-binding Protein dimerisation domain DVS28_RS14575 PF01795 MraW methylase family DVS28_RS14580 PF02381 MraZ protein, putative antitoxin-like DVS28_RS14590 PF00266 Aminotransferase class-V DVS28_RS14595 PF01553 Acyltransferase DVS28_RS14605 PF00698 Acyl transferase domain DVS28_RS14610 PF00550 Phosphopantetheine attachment site DVS28_RS14615 PF00501 AMP-binding enzyme DVS28_RS14615 PF13193 AMP-binding enzyme C-terminal domain DVS28_RS14620 PF00109 Beta-ketoacyl synthase, N-terminal domain DVS28_RS14620 PF02801 Beta-ketoacyl synthase, C-terminal domain DVS28_RS14625 PF13732 Domain of unknown function (DUF4162) DVS28_RS14625 PF00005 ABC transporter DVS28_RS14635 PF01040 UbiA prenyltransferase family DVS28_RS14640 PF02628 Cytochrome oxidase assembly protein DVS28_RS14645 PF00456 Transketolase, thiamine diphosphate binding domain DVS28_RS14645 PF02780 Transketolase, C-terminal domain DVS28_RS14645 PF02779 Transketolase, pyrimidine binding domain DVS28_RS14650 PF00923 Transaldolase/Fructose-6-phosphate aldolase DVS28_RS14675 PF01996 F420-0:Gamma-glutamyl ligase DVS28_RS14675 PF00881 Nitroreductase family DVS28_RS14680 PF00521 DNA gyrase/topoisomerase IV, subunit A DVS28_RS14680 PF03989 DNA gyrase C-terminal domain, beta-propeller DVS28_RS14680 PF14528 LAGLIDADG-like domain DVS28_RS14690 PF00005 ABC transporter DVS28_RS14695 PF00440 Bacterial regulatory proteins, tetR family DVS28_RS14700 PF02545 Maf-like protein DVS28_RS14705 PF01207 Dihydrouridine synthase (Dus) DVS28_RS14715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS14715 PF00986 DNA gyrase B subunit, carboxyl terminus DVS28_RS14715 PF00204 DNA gyrase B DVS28_RS14715 PF01751 Toprim domain DVS28_RS14720 PF01546 Peptidase family M20/M25/M40 DVS28_RS14720 PF07687 Peptidase dimerisation domain DVS28_RS14730 PF14602 Hexapeptide repeat of succinyl-transferase DVS28_RS14730 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle DVS28_RS14735 PF00155 Aminotransferase class I and II DVS28_RS14740 PF04545 Sigma-70, region 4 DVS28_RS14740 PF00140 Sigma-70 factor, region 1.2 DVS28_RS14740 PF04542 Sigma-70 region 2 DVS28_RS14740 PF04539 Sigma-70 region 3 DVS28_RS14750 PF13460 NAD(P)H-binding DVS28_RS14750 PF11066 Protein of unknown function (DUF2867) DVS28_RS14755 PF00226 DnaJ domain DVS28_RS14755 PF01556 DnaJ C terminal domain DVS28_RS14755 PF00684 DnaJ central domain DVS28_RS14770 PF01367 5'-3' exonuclease, C-terminal SAM fold DVS28_RS14770 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DVS28_RS14780 PF00672 HAMP domain DVS28_RS14780 PF00211 Adenylate and Guanylate cyclase catalytic domain DVS28_RS14795 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DVS28_RS14795 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DVS28_RS14795 PF02824 TGS domain DVS28_RS14795 PF03129 Anticodon binding domain DVS28_RS14805 PF00300 Histidine phosphatase superfamily (branch 1) DVS28_RS14815 PF00291 Pyridoxal-phosphate dependent enzyme DVS28_RS14815 PF13291 ACT domain DVS28_RS14820 PF00883 Cytosol aminopeptidase family, catalytic domain DVS28_RS14820 PF02789 Cytosol aminopeptidase family, N-terminal domain DVS28_RS14825 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS14825 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS14825 PF00563 EAL domain DVS28_RS14830 PF04073 Aminoacyl-tRNA editing domain DVS28_RS14830 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DVS28_RS14830 PF03129 Anticodon binding domain DVS28_RS14835 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS14835 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS14835 PF00563 EAL domain DVS28_RS14840 PF01661 Macro domain DVS28_RS14845 PF01594 AI-2E family transporter DVS28_RS14870 PF02347 Glycine cleavage system P-protein DVS28_RS14890 PF04244 Deoxyribodipyrimidine photo-lyase-related protein DVS28_RS14895 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DVS28_RS14895 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DVS28_RS14895 PF06827 Zinc finger found in FPG and IleRS DVS28_RS14905 PF00072 Response regulator receiver domain DVS28_RS14905 PF00196 Bacterial regulatory proteins, luxR family DVS28_RS14915 PF00034 Cytochrome c DVS28_RS14915 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DVS28_RS14915 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DVS28_RS14920 PF00115 Cytochrome C and Quinol oxidase polypeptide I DVS28_RS14925 PF00510 Cytochrome c oxidase subunit III DVS28_RS14945 PF00535 Glycosyl transferase family 2 DVS28_RS14950 PF00128 Alpha amylase, catalytic domain DVS28_RS14955 PF00285 Citrate synthase, C-terminal domain DVS28_RS14965 PF05088 Bacterial NAD-glutamate dehydrogenase DVS28_RS14980 PF00582 Universal stress protein family DVS28_RS14985 PF03330 Lytic transglycolase DVS28_RS14985 PF05036 Sporulation related domain DVS28_RS14990 PF13193 AMP-binding enzyme C-terminal domain DVS28_RS14990 PF00501 AMP-binding enzyme DVS28_RS15015 PF00459 Inositol monophosphatase family DVS28_RS15030 PF03109 ABC1 family DVS28_RS15050 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus DVS28_RS15050 PF05175 Methyltransferase small domain DVS28_RS15075 PF00106 short chain dehydrogenase DVS28_RS15095 PF03971 Monomeric isocitrate dehydrogenase DVS28_RS15125 PF04539 Sigma-70 region 3 DVS28_RS15125 PF04542 Sigma-70 region 2 DVS28_RS15125 PF04545 Sigma-70, region 4 DVS28_RS15125 PF00140 Sigma-70 factor, region 1.2 DVS28_RS15125 PF03979 Sigma-70 factor, region 1.1 DVS28_RS15130 PF13662 Toprim domain DVS28_RS15130 PF08278 DNA primase DnaG DnaB-binding DVS28_RS15130 PF10410 DnaB-helicase binding domain of primase DVS28_RS15130 PF08275 DNA primase catalytic core, N-terminal domain DVS28_RS15130 PF01807 CHC2 zinc finger DVS28_RS15135 PF13286 Phosphohydrolase-associated domain DVS28_RS15135 PF01966 HD domain DVS28_RS15145 PF03129 Anticodon binding domain DVS28_RS15145 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DVS28_RS15150 PF16859 Tetracyclin repressor-like, C-terminal domain DVS28_RS15150 PF00440 Bacterial regulatory proteins, tetR family DVS28_RS15155 PF00005 ABC transporter DVS28_RS15160 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS15165 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS15170 PF00497 Bacterial extracellular solute-binding proteins, family 3 DVS28_RS15175 PF00171 Aldehyde dehydrogenase family DVS28_RS15180 PF00171 Aldehyde dehydrogenase family DVS28_RS15185 PF01791 DeoC/LacD family aldolase DVS28_RS15205 PF01255 Putative undecaprenyl diphosphate synthase DVS28_RS15210 PF02565 Recombination protein O C terminal DVS28_RS15210 PF11967 Recombination protein O N terminal DVS28_RS15215 PF01061 ABC-2 type transporter DVS28_RS15220 PF13732 Domain of unknown function (DUF4162) DVS28_RS15220 PF00005 ABC transporter DVS28_RS15230 PF07650 KH domain DVS28_RS15230 PF01926 50S ribosome-binding GTPase DVS28_RS15235 PF00196 Bacterial regulatory proteins, luxR family DVS28_RS15235 PF00072 Response regulator receiver domain DVS28_RS15245 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DVS28_RS15265 PF01968 Hydantoinase/oxoprolinase DVS28_RS15265 PF05378 Hydantoinase/oxoprolinase N-terminal region DVS28_RS15275 PF13399 LytR cell envelope-related transcriptional attenuator DVS28_RS15275 PF03816 Cell envelope-related transcriptional attenuator domain DVS28_RS15290 PF03471 Transporter associated domain DVS28_RS15290 PF01595 Cyclin M transmembrane N-terminal domain DVS28_RS15290 PF00571 CBS domain DVS28_RS15295 PF03471 Transporter associated domain DVS28_RS15295 PF01595 Cyclin M transmembrane N-terminal domain DVS28_RS15295 PF00571 CBS domain DVS28_RS15300 PF00899 ThiF family DVS28_RS15300 PF00581 Rhodanese-like domain DVS28_RS15310 PF02589 LUD domain DVS28_RS15315 PF13183 4Fe-4S dicluster domain DVS28_RS15315 PF02589 LUD domain DVS28_RS15315 PF11870 Domain of unknown function (DUF3390) DVS28_RS15320 PF02754 Cysteine-rich domain DVS28_RS15325 PF00356 Bacterial regulatory proteins, lacI family DVS28_RS15330 PF00005 ABC transporter DVS28_RS15335 PF02653 Branched-chain amino acid transport system / permease component DVS28_RS15340 PF02653 Branched-chain amino acid transport system / permease component DVS28_RS15345 PF13407 Periplasmic binding protein domain DVS28_RS15350 PF05336 L-rhamnose mutarotase DVS28_RS15355 PF01261 Xylose isomerase-like TIM barrel DVS28_RS15360 PF00596 Class II Aldolase and Adducin N-terminal domain DVS28_RS15365 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DVS28_RS15365 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DVS28_RS15375 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain DVS28_RS15375 PF08531 Alpha-L-rhamnosidase N-terminal domain DVS28_RS15375 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain DVS28_RS15375 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain DVS28_RS15385 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DVS28_RS15385 PF00384 Molybdopterin oxidoreductase DVS28_RS15385 PF01568 Molydopterin dinucleotide binding domain DVS28_RS15395 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DVS28_RS15395 PF04324 BFD-like [2Fe-2S] binding domain DVS28_RS15395 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DVS28_RS15395 PF07992 Pyridine nucleotide-disulphide oxidoreductase DVS28_RS15395 PF13806 Rieske-like [2Fe-2S] domain DVS28_RS15395 PF18267 Rubredoxin NAD+ reductase C-terminal domain DVS28_RS15400 PF13806 Rieske-like [2Fe-2S] domain DVS28_RS15400 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DVS28_RS15400 PF07992 Pyridine nucleotide-disulphide oxidoreductase DVS28_RS15400 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DVS28_RS15400 PF18267 Rubredoxin NAD+ reductase C-terminal domain DVS28_RS15400 PF04324 BFD-like [2Fe-2S] binding domain DVS28_RS15405 PF07690 Major Facilitator Superfamily DVS28_RS15410 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DVS28_RS15410 PF07992 Pyridine nucleotide-disulphide oxidoreductase DVS28_RS15415 PF00072 Response regulator receiver domain DVS28_RS15415 PF09308 LuxQ, periplasmic DVS28_RS15415 PF00512 His Kinase A (phospho-acceptor) domain DVS28_RS15415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS15425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS15425 PF00512 His Kinase A (phospho-acceptor) domain DVS28_RS15425 PF00989 PAS fold DVS28_RS15430 PF00583 Acetyltransferase (GNAT) family DVS28_RS15440 PF01883 Iron-sulfur cluster assembly protein DVS28_RS15445 PF01592 NifU-like N terminal domain DVS28_RS15450 PF00266 Aminotransferase class-V DVS28_RS15455 PF00005 ABC transporter DVS28_RS15465 PF01458 Uncharacterized protein family (UPF0051) DVS28_RS15470 PF01458 Uncharacterized protein family (UPF0051) DVS28_RS15480 PF00571 CBS domain DVS28_RS15480 PF00005 ABC transporter DVS28_RS15485 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS15490 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS15495 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DVS28_RS15500 PF00072 Response regulator receiver domain DVS28_RS15500 PF00486 Transcriptional regulatory protein, C terminal DVS28_RS15505 PF00575 S1 RNA binding domain DVS28_RS15510 PF00698 Acyl transferase domain DVS28_RS15510 PF16197 Ketoacyl-synthetase C-terminal extension DVS28_RS15510 PF00109 Beta-ketoacyl synthase, N-terminal domain DVS28_RS15510 PF02801 Beta-ketoacyl synthase, C-terminal domain DVS28_RS15510 PF00107 Zinc-binding dehydrogenase DVS28_RS15510 PF08240 Alcohol dehydrogenase GroES-like domain DVS28_RS15510 PF00550 Phosphopantetheine attachment site DVS28_RS15510 PF14765 Polyketide synthase dehydratase DVS28_RS15510 PF08659 KR domain DVS28_RS15515 PF04122 Putative cell wall binding repeat 2 DVS28_RS15515 PF01520 N-acetylmuramoyl-L-alanine amidase DVS28_RS15520 PF01176 Translation initiation factor 1A / IF-1 DVS28_RS15525 PF02654 Cobalamin-5-phosphate synthase DVS28_RS15530 PF02654 Cobalamin-5-phosphate synthase DVS28_RS15540 PF02397 Bacterial sugar transferase DVS28_RS15545 PF12806 Acetyl-CoA dehydrogenase C-terminal like DVS28_RS15545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DVS28_RS15545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DVS28_RS15545 PF02770 Acyl-CoA dehydrogenase, middle domain DVS28_RS15555 PF01300 Telomere recombination DVS28_RS15555 PF03481 Putative GTP-binding controlling metal-binding DVS28_RS15560 PF01741 Large-conductance mechanosensitive channel, MscL DVS28_RS15575 PF01738 Dienelactone hydrolase family DVS28_RS15585 PF13538 UvrD-like helicase C-terminal domain DVS28_RS15585 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DVS28_RS15585 PF14490 Helix-hairpin-helix containing domain DVS28_RS15595 PF10011 Predicted membrane protein (DUF2254) DVS28_RS15640 PF00342 Phosphoglucose isomerase DVS28_RS15645 PF00378 Enoyl-CoA hydratase/isomerase DVS28_RS15650 PF02423 Ornithine cyclodeaminase/mu-crystallin family DVS28_RS15675 PF02770 Acyl-CoA dehydrogenase, middle domain DVS28_RS15675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DVS28_RS15675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DVS28_RS15680 PF08669 Glycine cleavage T-protein C-terminal barrel domain DVS28_RS15680 PF16350 FAD dependent oxidoreductase central domain DVS28_RS15680 PF01571 Aminomethyltransferase folate-binding domain DVS28_RS15680 PF01266 FAD dependent oxidoreductase DVS28_RS15700 PF00581 Rhodanese-like domain DVS28_RS15710 PF12146 Serine aminopeptidase, S33 DVS28_RS15730 PF05257 CHAP domain DVS28_RS15730 PF01476 LysM domain DVS28_RS15745 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region DVS28_RS15745 PF00326 Prolyl oligopeptidase family DVS28_RS15750 PF00072 Response regulator receiver domain DVS28_RS15750 PF00211 Adenylate and Guanylate cyclase catalytic domain DVS28_RS15795 PF01926 50S ribosome-binding GTPase DVS28_RS15795 PF06071 Protein of unknown function (DUF933) DVS28_RS15835 PF03551 Transcriptional regulator PadR-like family DVS28_RS15850 PF00330 Aconitase family (aconitate hydratase) DVS28_RS15850 PF00694 Aconitase C-terminal domain DVS28_RS15860 PF13193 AMP-binding enzyme C-terminal domain DVS28_RS15860 PF00501 AMP-binding enzyme DVS28_RS15865 PF01479 S4 domain DVS28_RS15865 PF00579 tRNA synthetases class I (W and Y) DVS28_RS15885 PF00892 EamA-like transporter family DVS28_RS15890 PF01565 FAD binding domain DVS28_RS15890 PF02913 FAD linked oxidases, C-terminal domain DVS28_RS15910 PF07859 alpha/beta hydrolase fold DVS28_RS15915 PF00962 Adenosine/AMP deaminase DVS28_RS15920 PF01243 Pyridoxamine 5'-phosphate oxidase DVS28_RS15925 PF00679 Elongation factor G C-terminus DVS28_RS15925 PF14492 Elongation Factor G, domain II DVS28_RS15925 PF00009 Elongation factor Tu GTP binding domain DVS28_RS15925 PF03144 Elongation factor Tu domain 2 DVS28_RS15930 PF00072 Response regulator receiver domain DVS28_RS15935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS15935 PF00072 Response regulator receiver domain DVS28_RS15935 PF00512 His Kinase A (phospho-acceptor) domain DVS28_RS15935 PF01627 Hpt domain DVS28_RS15940 PF08281 Sigma-70, region 4 DVS28_RS15940 PF04542 Sigma-70 region 2 DVS28_RS15950 PF00580 UvrD/REP helicase N-terminal domain DVS28_RS15950 PF13361 UvrD-like helicase C-terminal domain DVS28_RS15980 PF01055 Glycosyl hydrolases family 31 DVS28_RS15980 PF13802 Galactose mutarotase-like DVS28_RS15985 PF00723 Glycosyl hydrolases family 15 DVS28_RS15990 PF01547 Bacterial extracellular solute-binding protein DVS28_RS15995 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS16000 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS16005 PF00480 ROK family DVS28_RS16010 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DVS28_RS16010 PF07992 Pyridine nucleotide-disulphide oxidoreductase DVS28_RS16015 PF00512 His Kinase A (phospho-acceptor) domain DVS28_RS16015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS16015 PF00672 HAMP domain DVS28_RS16020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DVS28_RS16020 PF02770 Acyl-CoA dehydrogenase, middle domain DVS28_RS16020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DVS28_RS16025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DVS28_RS16025 PF02770 Acyl-CoA dehydrogenase, middle domain DVS28_RS16025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DVS28_RS16030 PF04545 Sigma-70, region 4 DVS28_RS16030 PF04539 Sigma-70 region 3 DVS28_RS16030 PF04542 Sigma-70 region 2 DVS28_RS16030 PF00140 Sigma-70 factor, region 1.2 DVS28_RS16035 PF02622 Uncharacterized ACR, COG1678 DVS28_RS16040 PF00440 Bacterial regulatory proteins, tetR family DVS28_RS16040 PF08359 YsiA-like protein, C-terminal region DVS28_RS16050 PF00296 Luciferase-like monooxygenase DVS28_RS16060 PF00561 alpha/beta hydrolase fold DVS28_RS16075 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DVS28_RS16095 PF00378 Enoyl-CoA hydratase/isomerase DVS28_RS16110 PF01039 Carboxyl transferase domain DVS28_RS16115 PF02785 Biotin carboxylase C-terminal domain DVS28_RS16115 PF00289 Biotin carboxylase, N-terminal domain DVS28_RS16115 PF00364 Biotin-requiring enzyme DVS28_RS16115 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DVS28_RS16125 PF01695 IstB-like ATP binding protein DVS28_RS16135 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS16135 PF13185 GAF domain DVS28_RS16135 PF00563 EAL domain DVS28_RS16150 PF00005 ABC transporter DVS28_RS16155 PF02653 Branched-chain amino acid transport system / permease component DVS28_RS16160 PF02653 Branched-chain amino acid transport system / permease component DVS28_RS16165 PF01243 Pyridoxamine 5'-phosphate oxidase DVS28_RS16170 PF01894 Uncharacterised protein family UPF0047 DVS28_RS16185 PF01432 Peptidase family M3 DVS28_RS16205 PF00144 Beta-lactamase DVS28_RS16220 PF01975 Survival protein SurE DVS28_RS16230 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DVS28_RS16250 PF02867 Ribonucleotide reductase, barrel domain DVS28_RS16250 PF08471 Class II vitamin B12-dependent ribonucleotide reductase DVS28_RS16255 PF03477 ATP cone domain DVS28_RS16265 PF01726 LexA DNA binding domain DVS28_RS16265 PF00717 Peptidase S24-like DVS28_RS16275 PF02653 Branched-chain amino acid transport system / permease component DVS28_RS16280 PF00005 ABC transporter DVS28_RS16290 PF00072 Response regulator receiver domain DVS28_RS16290 PF00486 Transcriptional regulatory protein, C terminal DVS28_RS16295 PF00005 ABC transporter DVS28_RS16300 PF01926 50S ribosome-binding GTPase DVS28_RS16300 PF13167 GTP-binding GTPase N-terminal DVS28_RS16300 PF16360 GTP-binding GTPase Middle Region DVS28_RS16305 PF01678 Diaminopimelate epimerase DVS28_RS16315 PF00919 Uncharacterized protein family UPF0004 DVS28_RS16315 PF04055 Radical SAM superfamily DVS28_RS16325 PF02631 RecX family DVS28_RS16330 PF00154 recA bacterial DNA recombination protein DVS28_RS16345 PF00994 Probable molybdopterin binding domain DVS28_RS16345 PF02464 Competence-damaged protein DVS28_RS16345 PF18146 Damage-inducible protein CinA KH domain DVS28_RS16350 PF01066 CDP-alcohol phosphatidyltransferase DVS28_RS16355 PF00919 Uncharacterized protein family UPF0004 DVS28_RS16355 PF18693 TRAM domain DVS28_RS16355 PF04055 Radical SAM superfamily DVS28_RS16365 PF04960 Glutaminase DVS28_RS16370 PF00005 ABC transporter DVS28_RS16375 PF00582 Universal stress protein family DVS28_RS16415 PF02405 Permease MlaE DVS28_RS16425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS16430 PF00072 Response regulator receiver domain DVS28_RS16430 PF01339 CheB methylesterase DVS28_RS16435 PF05425 Copper resistance protein D DVS28_RS16435 PF13115 YtkA-like DVS28_RS16435 PF04234 CopC domain DVS28_RS16445 PF17854 FtsK alpha domain DVS28_RS16445 PF09397 Ftsk gamma domain DVS28_RS16445 PF01580 FtsK/SpoIIIE family DVS28_RS16450 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DVS28_RS16450 PF17770 Ribonuclease J C-terminal domain DVS28_RS16450 PF12706 Beta-lactamase superfamily domain DVS28_RS16455 PF00701 Dihydrodipicolinate synthetase family DVS28_RS16465 PF01654 Cytochrome bd terminal oxidase subunit I DVS28_RS16470 PF02322 Cytochrome bd terminal oxidase subunit II DVS28_RS16485 PF00082 Subtilase family DVS28_RS16500 PF05173 Dihydrodipicolinate reductase, C-terminus DVS28_RS16500 PF01113 Dihydrodipicolinate reductase, N-terminus DVS28_RS16505 PF01406 tRNA synthetases class I (C) catalytic domain DVS28_RS16510 PF01810 LysE type translocator DVS28_RS16515 PF05193 Peptidase M16 inactive domain DVS28_RS16515 PF00675 Insulinase (Peptidase family M16) DVS28_RS16520 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DVS28_RS16520 PF01138 3' exoribonuclease family, domain 1 DVS28_RS16520 PF00575 S1 RNA binding domain DVS28_RS16520 PF00013 KH domain DVS28_RS16525 PF00312 Ribosomal protein S15 DVS28_RS16530 PF04122 Putative cell wall binding repeat 2 DVS28_RS16530 PF01520 N-acetylmuramoyl-L-alanine amidase DVS28_RS16535 PF00082 Subtilase family DVS28_RS16555 PF03330 Lytic transglycolase DVS28_RS16560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS16560 PF00512 His Kinase A (phospho-acceptor) domain DVS28_RS16560 PF00989 PAS fold DVS28_RS16565 PF00072 Response regulator receiver domain DVS28_RS16565 PF00196 Bacterial regulatory proteins, luxR family DVS28_RS16575 PF13244 Domain of unknown function (DUF4040) DVS28_RS16575 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter DVS28_RS16575 PF00361 Proton-conducting membrane transporter DVS28_RS16575 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DVS28_RS16590 PF00361 Proton-conducting membrane transporter DVS28_RS16610 PF01687 Riboflavin kinase DVS28_RS16610 PF06574 FAD synthetase DVS28_RS16615 PF09142 tRNA Pseudouridine synthase II, C terminal DVS28_RS16615 PF01509 TruB family pseudouridylate synthase (N terminal domain) DVS28_RS16615 PF16198 tRNA pseudouridylate synthase B C-terminal domain DVS28_RS16625 PF02033 Ribosome-binding factor A DVS28_RS16655 PF11987 Translation-initiation factor 2 DVS28_RS16655 PF00009 Elongation factor Tu GTP binding domain DVS28_RS16655 PF04760 Translation initiation factor IF-2, N-terminal region DVS28_RS16665 PF02576 RimP N-terminal domain DVS28_RS16665 PF17384 RimP C-terminal SH3 domain DVS28_RS16680 PF02254 TrkA-N domain DVS28_RS16680 PF07885 Ion channel DVS28_RS16690 PF00005 ABC transporter DVS28_RS16690 PF12704 MacB-like periplasmic core domain DVS28_RS16690 PF02687 FtsX-like permease family DVS28_RS16700 PF00459 Inositol monophosphatase family DVS28_RS16705 PF04551 GcpE protein DVS28_RS16720 PF17820 PDZ domain DVS28_RS16720 PF02163 Peptidase family M50 DVS28_RS16725 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DVS28_RS16725 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DVS28_RS16725 PF13288 DXP reductoisomerase C-terminal domain DVS28_RS16730 PF04055 Radical SAM superfamily DVS28_RS16740 PF01765 Ribosome recycling factor DVS28_RS16745 PF00696 Amino acid kinase family DVS28_RS16750 PF00889 Elongation factor TS DVS28_RS16755 PF00318 Ribosomal protein S2 DVS28_RS16770 PF04542 Sigma-70 region 2 DVS28_RS16770 PF04539 Sigma-70 region 3 DVS28_RS16770 PF04545 Sigma-70, region 4 DVS28_RS16775 PF02899 Phage integrase, N-terminal SAM-like domain DVS28_RS16775 PF00589 Phage integrase family DVS28_RS16780 PF17782 DprA winged helix domain DVS28_RS16780 PF02481 DNA recombination-mediator protein A DVS28_RS16785 PF01078 Magnesium chelatase, subunit ChlI DVS28_RS16785 PF13335 Magnesium chelatase, subunit ChlI C-terminal DVS28_RS16790 PF02021 Uncharacterised protein family UPF0102 DVS28_RS16795 PF04122 Putative cell wall binding repeat 2 DVS28_RS16795 PF01520 N-acetylmuramoyl-L-alanine amidase DVS28_RS16810 PF10611 Protein of unknown function (DUF2469) DVS28_RS16815 PF10502 Signal peptidase, peptidase S26 DVS28_RS16820 PF01245 Ribosomal protein L19 DVS28_RS16825 PF10502 Signal peptidase, peptidase S26 DVS28_RS16830 PF01746 tRNA (Guanine-1)-methyltransferase DVS28_RS16835 PF01782 RimM N-terminal domain DVS28_RS16835 PF05239 PRC-barrel domain DVS28_RS16845 PF00886 Ribosomal protein S16 DVS28_RS16850 PF01699 Sodium/calcium exchanger protein DVS28_RS16860 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS16860 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS16860 PF00563 EAL domain DVS28_RS16860 PF13188 PAS domain DVS28_RS16865 PF05922 Peptidase inhibitor I9 DVS28_RS16865 PF00082 Subtilase family DVS28_RS16870 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS16870 PF00563 EAL domain DVS28_RS16870 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS16875 PF00082 Subtilase family DVS28_RS16880 PF05922 Peptidase inhibitor I9 DVS28_RS16880 PF00082 Subtilase family DVS28_RS16885 PF02978 Signal peptide binding domain DVS28_RS16885 PF00448 SRP54-type protein, GTPase domain DVS28_RS16885 PF02881 SRP54-type protein, helical bundle domain DVS28_RS16905 PF00005 ABC transporter DVS28_RS16905 PF13732 Domain of unknown function (DUF4162) DVS28_RS16915 PF02661 Fic/DOC family DVS28_RS16915 PF13784 Fic/DOC family N-terminal DVS28_RS16920 PF02881 SRP54-type protein, helical bundle domain DVS28_RS16920 PF00448 SRP54-type protein, GTPase domain DVS28_RS16935 PF06470 SMC proteins Flexible Hinge Domain DVS28_RS16935 PF02463 RecF/RecN/SMC N terminal domain DVS28_RS16945 PF00561 alpha/beta hydrolase fold DVS28_RS16955 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DVS28_RS16955 PF06827 Zinc finger found in FPG and IleRS DVS28_RS16955 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DVS28_RS16960 PF00035 Double-stranded RNA binding motif DVS28_RS16960 PF14622 Ribonuclease-III-like DVS28_RS16965 PF00550 Phosphopantetheine attachment site DVS28_RS16970 PF02504 Fatty acid synthesis protein DVS28_RS16975 PF01783 Ribosomal L32p protein family DVS28_RS16990 PF01467 Cytidylyltransferase-like DVS28_RS17000 PF00672 HAMP domain DVS28_RS17000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS17000 PF01627 Hpt domain DVS28_RS17000 PF17149 Periplasmic sensor domain found in signal transduction proteins DVS28_RS17000 PF00072 Response regulator receiver domain DVS28_RS17000 PF00512 His Kinase A (phospho-acceptor) domain DVS28_RS17005 PF00270 DEAD/DEAH box helicase DVS28_RS17005 PF00271 Helicase conserved C-terminal domain DVS28_RS17005 PF17191 RecG wedge domain DVS28_RS17010 PF08543 Phosphomethylpyrimidine kinase DVS28_RS17015 PF00005 ABC transporter DVS28_RS17020 PF02371 Transposase IS116/IS110/IS902 family DVS28_RS17020 PF01548 Transposase DVS28_RS17030 PF00586 AIR synthase related protein, N-terminal domain DVS28_RS17030 PF02769 AIR synthase related protein, C-terminal domain DVS28_RS17050 PF07478 D-ala D-ala ligase C-terminus DVS28_RS17050 PF01820 D-ala D-ala ligase N-terminus DVS28_RS17055 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DVS28_RS17055 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DVS28_RS17065 PF01983 Guanylyl transferase CofC like DVS28_RS17085 PF13367 PrsW family intramembrane metalloprotease DVS28_RS17110 PF00749 tRNA synthetases class I (E and Q), catalytic domain DVS28_RS17125 PF01557 Fumarylacetoacetate (FAA) hydrolase family DVS28_RS17135 PF08502 LeuA allosteric (dimerisation) domain DVS28_RS17135 PF00682 HMGL-like DVS28_RS17150 PF03471 Transporter associated domain DVS28_RS17150 PF02080 TrkA-C domain DVS28_RS17150 PF00999 Sodium/hydrogen exchanger family DVS28_RS17155 PF00365 Phosphofructokinase DVS28_RS17165 PF10518 TAT (twin-arginine translocation) pathway signal sequence DVS28_RS17165 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding DVS28_RS17165 PF07992 Pyridine nucleotide-disulphide oxidoreductase DVS28_RS17170 PF01063 Amino-transferase class IV DVS28_RS17175 PF00180 Isocitrate/isopropylmalate dehydrogenase DVS28_RS17185 PF00583 Acetyltransferase (GNAT) family DVS28_RS17195 PF00300 Histidine phosphatase superfamily (branch 1) DVS28_RS17195 PF00293 NUDIX domain DVS28_RS17210 PF07732 Multicopper oxidase DVS28_RS17210 PF07731 Multicopper oxidase DVS28_RS17220 PF04542 Sigma-70 region 2 DVS28_RS17220 PF08281 Sigma-70, region 4 DVS28_RS17235 PF08281 Sigma-70, region 4 DVS28_RS17235 PF04542 Sigma-70 region 2 DVS28_RS17240 PF00561 alpha/beta hydrolase fold DVS28_RS17245 PF04545 Sigma-70, region 4 DVS28_RS17245 PF04539 Sigma-70 region 3 DVS28_RS17245 PF04542 Sigma-70 region 2 DVS28_RS17245 PF00140 Sigma-70 factor, region 1.2 DVS28_RS17275 PF00271 Helicase conserved C-terminal domain DVS28_RS17275 PF00176 SNF2 family N-terminal domain DVS28_RS17275 PF12419 SNF2 Helicase protein DVS28_RS17285 PF00694 Aconitase C-terminal domain DVS28_RS17290 PF00330 Aconitase family (aconitate hydratase) DVS28_RS17300 PF01507 Phosphoadenosine phosphosulfate reductase family DVS28_RS17305 PF13188 PAS domain DVS28_RS17305 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS17305 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS17305 PF00563 EAL domain DVS28_RS17310 PF04239 Protein of unknown function (DUF421) DVS28_RS17315 PF00009 Elongation factor Tu GTP binding domain DVS28_RS17350 PF08502 LeuA allosteric (dimerisation) domain DVS28_RS17350 PF00682 HMGL-like DVS28_RS17355 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS17360 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS17360 PF14785 Maltose transport system permease protein MalF P2 domain DVS28_RS17370 PF00356 Bacterial regulatory proteins, lacI family DVS28_RS17390 PF00196 Bacterial regulatory proteins, luxR family DVS28_RS17390 PF00072 Response regulator receiver domain DVS28_RS17395 PF04389 Peptidase family M28 DVS28_RS17395 PF02225 PA domain DVS28_RS17400 PF01545 Cation efflux family DVS28_RS17400 PF16916 Dimerisation domain of Zinc Transporter DVS28_RS17415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DVS28_RS17415 PF00005 ABC transporter DVS28_RS17420 PF12911 N-terminal TM domain of oligopeptide transport permease C DVS28_RS17420 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS17425 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS17430 PF12793 Sugar transport-related sRNA regulator N-term DVS28_RS17430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DVS28_RS17435 PF00872 Transposase, Mutator family DVS28_RS17450 PF03061 Thioesterase superfamily DVS28_RS17460 PF02719 Polysaccharide biosynthesis protein DVS28_RS17475 PF13614 AAA domain DVS28_RS17490 PF02397 Bacterial sugar transferase DVS28_RS17495 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DVS28_RS17495 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DVS28_RS17495 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DVS28_RS17500 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DVS28_RS17500 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DVS28_RS17505 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DVS28_RS17510 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DVS28_RS17515 PF00291 Pyridoxal-phosphate dependent enzyme DVS28_RS17560 PF02683 Cytochrome C biogenesis protein transmembrane region DVS28_RS17560 PF17991 Thioredoxin like C-terminal domain DVS28_RS17560 PF00578 AhpC/TSA family DVS28_RS17595 PF03704 Bacterial transcriptional activator domain DVS28_RS17595 PF00486 Transcriptional regulatory protein, C terminal DVS28_RS17605 PF13732 Domain of unknown function (DUF4162) DVS28_RS17605 PF00005 ABC transporter DVS28_RS17610 PF07730 Histidine kinase DVS28_RS17615 PF00196 Bacterial regulatory proteins, luxR family DVS28_RS17615 PF00072 Response regulator receiver domain DVS28_RS17620 PF16884 N-terminal domain of oxidoreductase DVS28_RS17620 PF00107 Zinc-binding dehydrogenase DVS28_RS17635 PF09587 Bacterial capsule synthesis protein PGA_cap DVS28_RS17665 PF00005 ABC transporter DVS28_RS17665 PF02687 FtsX-like permease family DVS28_RS17665 PF12704 MacB-like periplasmic core domain DVS28_RS17670 PF12704 MacB-like periplasmic core domain DVS28_RS17670 PF02687 FtsX-like permease family DVS28_RS17670 PF00005 ABC transporter DVS28_RS17690 PF07992 Pyridine nucleotide-disulphide oxidoreductase DVS28_RS17690 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DVS28_RS17695 PF07883 Cupin domain DVS28_RS17700 PF00364 Biotin-requiring enzyme DVS28_RS17700 PF02817 e3 binding domain DVS28_RS17700 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DVS28_RS17705 PF02780 Transketolase, C-terminal domain DVS28_RS17705 PF02779 Transketolase, pyrimidine binding domain DVS28_RS17710 PF00676 Dehydrogenase E1 component DVS28_RS17725 PF01323 DSBA-like thioredoxin domain DVS28_RS17735 PF13732 Domain of unknown function (DUF4162) DVS28_RS17735 PF00005 ABC transporter DVS28_RS17745 PF00501 AMP-binding enzyme DVS28_RS17750 PF01903 CbiX DVS28_RS17755 PF01774 UreD urease accessory protein DVS28_RS17760 PF02492 CobW/HypB/UreG, nucleotide-binding domain DVS28_RS17765 PF01730 UreF DVS28_RS17770 PF01979 Amidohydrolase family DVS28_RS17770 PF00449 Urease alpha-subunit, N-terminal domain DVS28_RS17775 PF00547 Urease, gamma subunit DVS28_RS17775 PF00699 Urease beta subunit DVS28_RS17785 PF01014 Uricase DVS28_RS17790 PF00576 HIUase/Transthyretin family DVS28_RS17795 PF03561 Allantoicase repeat DVS28_RS17800 PF01979 Amidohydrolase family DVS28_RS17825 PF03450 CO dehydrogenase flavoprotein C-terminal domain DVS28_RS17825 PF00941 FAD binding domain in molybdopterin dehydrogenase DVS28_RS17830 PF00111 2Fe-2S iron-sulfur cluster binding domain DVS28_RS17830 PF01799 [2Fe-2S] binding domain DVS28_RS17835 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DVS28_RS17835 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DVS28_RS17840 PF01979 Amidohydrolase family DVS28_RS17850 PF01842 ACT domain DVS28_RS17850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DVS28_RS17850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DVS28_RS17860 PF00563 EAL domain DVS28_RS17860 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS17860 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS17865 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS17865 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS17865 PF00563 EAL domain DVS28_RS17870 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DVS28_RS17870 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DVS28_RS17875 PF10369 Small subunit of acetolactate synthase DVS28_RS17880 PF00205 Thiamine pyrophosphate enzyme, central domain DVS28_RS17880 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DVS28_RS17880 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DVS28_RS17885 PF00933 Glycosyl hydrolase family 3 N terminal domain DVS28_RS17890 PF01070 FMN-dependent dehydrogenase DVS28_RS17905 PF01593 Flavin containing amine oxidoreductase DVS28_RS17910 PF00348 Polyprenyl synthetase DVS28_RS17920 PF02637 GatB domain DVS28_RS17920 PF02934 GatB/GatE catalytic domain DVS28_RS17925 PF01425 Amidase DVS28_RS17930 PF02686 Glu-tRNAGln amidotransferase C subunit DVS28_RS17935 PF12697 Alpha/beta hydrolase family DVS28_RS17945 PF00092 von Willebrand factor type A domain DVS28_RS17945 PF07584 Aerotolerance regulator N-terminal DVS28_RS17950 PF01882 Protein of unknown function DUF58 DVS28_RS17955 PF17863 AAA lid domain DVS28_RS17955 PF07726 ATPase family associated with various cellular activities (AAA) DVS28_RS17970 PF07963 Prokaryotic N-terminal methylation motif DVS28_RS17970 PF00114 Pilin (bacterial filament) DVS28_RS17985 PF12826 Helix-hairpin-helix motif DVS28_RS17985 PF01653 NAD-dependent DNA ligase adenylation domain DVS28_RS17985 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DVS28_RS17985 PF00533 BRCA1 C Terminus (BRCT) domain DVS28_RS17985 PF03120 NAD-dependent DNA ligase OB-fold domain DVS28_RS17990 PF00106 short chain dehydrogenase DVS28_RS17995 PF13280 WYL domain DVS28_RS18000 PF12697 Alpha/beta hydrolase family DVS28_RS18010 PF00266 Aminotransferase class-V DVS28_RS18015 PF00561 alpha/beta hydrolase fold DVS28_RS18025 PF12911 N-terminal TM domain of oligopeptide transport permease C DVS28_RS18025 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS18030 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS18035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DVS28_RS18045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DVS28_RS18045 PF00005 ABC transporter DVS28_RS18050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DVS28_RS18050 PF00005 ABC transporter DVS28_RS18075 PF00005 ABC transporter DVS28_RS18080 PF00005 ABC transporter DVS28_RS18100 PF00561 alpha/beta hydrolase fold DVS28_RS18105 PF13649 Methyltransferase domain DVS28_RS18115 PF00210 Ferritin-like domain DVS28_RS18125 PF00766 Electron transfer flavoprotein FAD-binding domain DVS28_RS18125 PF01012 Electron transfer flavoprotein domain DVS28_RS18130 PF01012 Electron transfer flavoprotein domain DVS28_RS18140 PF08241 Methyltransferase domain DVS28_RS18145 PF13193 AMP-binding enzyme C-terminal domain DVS28_RS18145 PF00501 AMP-binding enzyme DVS28_RS18150 PF12146 Serine aminopeptidase, S33 DVS28_RS18160 PF03065 Glycosyl hydrolase family 57 DVS28_RS18160 PF09210 Domain of unknown function (DUF1957) DVS28_RS18170 PF13302 Acetyltransferase (GNAT) domain DVS28_RS18170 PF00027 Cyclic nucleotide-binding domain DVS28_RS18175 PF00905 Penicillin binding protein transpeptidase domain DVS28_RS18175 PF00912 Transglycosylase DVS28_RS18175 PF17092 Penicillin-binding protein OB-like domain DVS28_RS18185 PF12704 MacB-like periplasmic core domain DVS28_RS18185 PF02687 FtsX-like permease family DVS28_RS18185 PF00005 ABC transporter DVS28_RS18190 PF02687 FtsX-like permease family DVS28_RS18190 PF00005 ABC transporter DVS28_RS18190 PF12704 MacB-like periplasmic core domain DVS28_RS18205 PF00486 Transcriptional regulatory protein, C terminal DVS28_RS18205 PF00072 Response regulator receiver domain DVS28_RS18210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS18210 PF00672 HAMP domain DVS28_RS18210 PF00512 His Kinase A (phospho-acceptor) domain DVS28_RS18220 PF00069 Protein kinase domain DVS28_RS18220 PF13191 AAA ATPase domain DVS28_RS18235 PF00132 Bacterial transferase hexapeptide (six repeats) DVS28_RS18240 PF01209 ubiE/COQ5 methyltransferase family DVS28_RS18245 PF00378 Enoyl-CoA hydratase/isomerase DVS28_RS18250 PF00069 Protein kinase domain DVS28_RS18250 PF14032 PknH-like extracellular domain DVS28_RS18255 PF00154 recA bacterial DNA recombination protein DVS28_RS18270 PF02770 Acyl-CoA dehydrogenase, middle domain DVS28_RS18270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DVS28_RS18270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DVS28_RS18275 PF02770 Acyl-CoA dehydrogenase, middle domain DVS28_RS18275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DVS28_RS18275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DVS28_RS18290 PF00069 Protein kinase domain DVS28_RS18290 PF03793 PASTA domain DVS28_RS18295 PF12833 Helix-turn-helix domain DVS28_RS18305 PF00171 Aldehyde dehydrogenase family DVS28_RS18320 PF00108 Thiolase, N-terminal domain DVS28_RS18320 PF02803 Thiolase, C-terminal domain DVS28_RS18370 PF04122 Putative cell wall binding repeat 2 DVS28_RS18370 PF01520 N-acetylmuramoyl-L-alanine amidase DVS28_RS18375 PF01568 Molydopterin dinucleotide binding domain DVS28_RS18375 PF00384 Molybdopterin oxidoreductase DVS28_RS18375 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DVS28_RS18380 PF00384 Molybdopterin oxidoreductase DVS28_RS18380 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DVS28_RS18380 PF01568 Molydopterin dinucleotide binding domain DVS28_RS18385 PF13247 4Fe-4S dicluster domain DVS28_RS18385 PF09163 Formate dehydrogenase N, transmembrane DVS28_RS18395 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DVS28_RS18400 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DVS28_RS18415 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DVS28_RS18415 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DVS28_RS18435 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DVS28_RS18440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS18440 PF00512 His Kinase A (phospho-acceptor) domain DVS28_RS18455 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DVS28_RS18460 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DVS28_RS18460 PF02874 ATP synthase alpha/beta family, beta-barrel domain DVS28_RS18465 PF00231 ATP synthase DVS28_RS18470 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DVS28_RS18470 PF00306 ATP synthase alpha/beta chain, C terminal domain DVS28_RS18470 PF02874 ATP synthase alpha/beta family, beta-barrel domain DVS28_RS18475 PF00213 ATP synthase delta (OSCP) subunit DVS28_RS18480 PF00430 ATP synthase B/B' CF(0) DVS28_RS18485 PF00137 ATP synthase subunit C DVS28_RS18490 PF00119 ATP synthase A chain DVS28_RS18505 PF00953 Glycosyl transferase family 4 DVS28_RS18510 PF00464 Serine hydroxymethyltransferase DVS28_RS18525 PF02502 Ribose/Galactose Isomerase DVS28_RS18530 PF08240 Alcohol dehydrogenase GroES-like domain DVS28_RS18530 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DVS28_RS18535 PF00106 short chain dehydrogenase DVS28_RS18545 PF13649 Methyltransferase domain DVS28_RS18545 PF17827 PrmC N-terminal domain DVS28_RS18550 PF03358 NADPH-dependent FMN reductase DVS28_RS18560 PF00472 RF-1 domain DVS28_RS18560 PF03462 PCRF domain DVS28_RS18565 PF07136 Protein of unknown function (DUF1385) DVS28_RS18570 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DVS28_RS18570 PF07498 Rho termination factor, N-terminal domain DVS28_RS18570 PF07497 Rho termination factor, RNA-binding domain DVS28_RS18575 PF08544 GHMP kinases C terminal DVS28_RS18575 PF00288 GHMP kinases N terminal domain DVS28_RS18580 PF03447 Homoserine dehydrogenase, NAD binding domain DVS28_RS18580 PF00742 Homoserine dehydrogenase DVS28_RS18580 PF01842 ACT domain DVS28_RS18585 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DVS28_RS18585 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DVS28_RS18590 PF05746 DALR anticodon binding domain DVS28_RS18590 PF00750 tRNA synthetases class I (R) DVS28_RS18590 PF03485 Arginyl tRNA synthetase N terminal domain DVS28_RS18595 PF00072 Response regulator receiver domain DVS28_RS18595 PF00486 Transcriptional regulatory protein, C terminal DVS28_RS18600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS18600 PF07730 Histidine kinase DVS28_RS18600 PF13185 GAF domain DVS28_RS18625 PF12697 Alpha/beta hydrolase family DVS28_RS18640 PF00501 AMP-binding enzyme DVS28_RS18655 PF07726 ATPase family associated with various cellular activities (AAA) DVS28_RS18655 PF17863 AAA lid domain DVS28_RS18690 PF13302 Acetyltransferase (GNAT) domain DVS28_RS18705 PF04075 F420H(2)-dependent quinone reductase DVS28_RS18715 PF01037 Lrp/AsnC ligand binding domain DVS28_RS18720 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DVS28_RS18725 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DVS28_RS18725 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DVS28_RS18725 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DVS28_RS18725 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DVS28_RS18735 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DVS28_RS18735 PF01243 Pyridoxamine 5'-phosphate oxidase DVS28_RS18745 PF00082 Subtilase family DVS28_RS18750 PF00561 alpha/beta hydrolase fold DVS28_RS18760 PF02634 FdhD/NarQ family DVS28_RS18785 PF08402 TOBE domain DVS28_RS18785 PF00005 ABC transporter DVS28_RS18790 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS18805 PF04542 Sigma-70 region 2 DVS28_RS18805 PF08281 Sigma-70, region 4 DVS28_RS18830 PF02146 Sir2 family DVS28_RS18840 PF00665 Integrase core domain DVS28_RS18845 PF00037 4Fe-4S binding domain DVS28_RS18860 PF00563 EAL domain DVS28_RS18860 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS18860 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS18865 PF00486 Transcriptional regulatory protein, C terminal DVS28_RS18865 PF00072 Response regulator receiver domain DVS28_RS18870 PF02887 Pyruvate kinase, alpha/beta domain DVS28_RS18870 PF00224 Pyruvate kinase, barrel domain DVS28_RS18870 PF00391 PEP-utilising enzyme, mobile domain DVS28_RS18890 PF09297 NADH pyrophosphatase zinc ribbon domain DVS28_RS18890 PF00293 NUDIX domain DVS28_RS18890 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain DVS28_RS18895 PF02653 Branched-chain amino acid transport system / permease component DVS28_RS18900 PF02653 Branched-chain amino acid transport system / permease component DVS28_RS18905 PF00005 ABC transporter DVS28_RS18910 PF02608 ABC transporter substrate-binding protein PnrA-like DVS28_RS18920 PF02585 GlcNAc-PI de-N-acetylase DVS28_RS18930 PF00486 Transcriptional regulatory protein, C terminal DVS28_RS18930 PF00072 Response regulator receiver domain DVS28_RS18935 PF02401 LytB protein DVS28_RS18945 PF02254 TrkA-N domain DVS28_RS18945 PF02080 TrkA-C domain DVS28_RS18950 PF02386 Cation transport protein DVS28_RS18960 PF02386 Cation transport protein DVS28_RS18970 PF00633 Helix-hairpin-helix motif DVS28_RS18970 PF00730 HhH-GPD superfamily base excision DNA repair protein DVS28_RS18980 PF00512 His Kinase A (phospho-acceptor) domain DVS28_RS18980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS18985 PF00486 Transcriptional regulatory protein, C terminal DVS28_RS18985 PF00072 Response regulator receiver domain DVS28_RS18990 PF01895 PhoU domain DVS28_RS18995 PF00266 Aminotransferase class-V DVS28_RS19000 PF12146 Serine aminopeptidase, S33 DVS28_RS19005 PF13089 Polyphosphate kinase N-terminal domain DVS28_RS19005 PF02503 Polyphosphate kinase middle domain DVS28_RS19005 PF17941 Polyphosphate kinase C-terminal domain 1 DVS28_RS19005 PF13090 Polyphosphate kinase C-terminal domain 2 DVS28_RS19010 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DVS28_RS19015 PF00378 Enoyl-CoA hydratase/isomerase DVS28_RS19020 PF00072 Response regulator receiver domain DVS28_RS19025 PF01590 GAF domain DVS28_RS19025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS19025 PF00512 His Kinase A (phospho-acceptor) domain DVS28_RS19025 PF08446 PAS fold DVS28_RS19025 PF00360 Phytochrome region DVS28_RS19030 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS19045 PF12728 Helix-turn-helix domain DVS28_RS19060 PF00672 HAMP domain DVS28_RS19060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS19060 PF00512 His Kinase A (phospho-acceptor) domain DVS28_RS19060 PF13755 Sensor N-terminal transmembrane domain DVS28_RS19060 PF13756 Stimulus-sensing domain DVS28_RS19065 PF13638 PIN domain DVS28_RS19065 PF02562 PhoH-like protein DVS28_RS19075 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DVS28_RS19080 PF01255 Putative undecaprenyl diphosphate synthase DVS28_RS19085 PF04107 Glutamate-cysteine ligase family 2(GCS2) DVS28_RS19090 PF06827 Zinc finger found in FPG and IleRS DVS28_RS19090 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DVS28_RS19095 PF03449 Transcription elongation factor, N-terminal DVS28_RS19095 PF01272 Transcription elongation factor, GreA/GreB, C-term DVS28_RS19100 PF04107 Glutamate-cysteine ligase family 2(GCS2) DVS28_RS19105 PF12867 DinB superfamily DVS28_RS19105 PF03781 Sulfatase-modifying factor enzyme 1 DVS28_RS19115 PF10017 Histidine-specific methyltransferase, SAM-dependent DVS28_RS19125 PF10518 TAT (twin-arginine translocation) pathway signal sequence DVS28_RS19125 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DVS28_RS19125 PF01568 Molydopterin dinucleotide binding domain DVS28_RS19125 PF00384 Molybdopterin oxidoreductase DVS28_RS19130 PF08206 Ribonuclease B OB domain DVS28_RS19130 PF17876 Cold shock domain DVS28_RS19130 PF00773 RNB domain DVS28_RS19130 PF00575 S1 RNA binding domain DVS28_RS19170 PF01061 ABC-2 type transporter DVS28_RS19170 PF00498 FHA domain DVS28_RS19170 PF00005 ABC transporter DVS28_RS19175 PF13302 Acetyltransferase (GNAT) domain DVS28_RS19180 PF04122 Putative cell wall binding repeat 2 DVS28_RS19180 PF01520 N-acetylmuramoyl-L-alanine amidase DVS28_RS19215 PF00293 NUDIX domain DVS28_RS19235 PF01037 Lrp/AsnC ligand binding domain DVS28_RS19240 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DVS28_RS19240 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DVS28_RS19245 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS19245 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS19245 PF00563 EAL domain DVS28_RS19250 PF01367 5'-3' exonuclease, C-terminal SAM fold DVS28_RS19250 PF01612 3'-5' exonuclease DVS28_RS19250 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DVS28_RS19250 PF00476 DNA polymerase family A DVS28_RS19265 PF02310 B12 binding domain DVS28_RS19265 PF01642 Methylmalonyl-CoA mutase DVS28_RS19270 PF00296 Luciferase-like monooxygenase DVS28_RS19275 PF00291 Pyridoxal-phosphate dependent enzyme DVS28_RS19275 PF13291 ACT domain DVS28_RS19310 PF00206 Lyase DVS28_RS19310 PF10415 Fumarase C C-terminus DVS28_RS19320 PF04122 Putative cell wall binding repeat 2 DVS28_RS19320 PF01520 N-acetylmuramoyl-L-alanine amidase DVS28_RS19325 PF00999 Sodium/hydrogen exchanger family DVS28_RS19335 PF08335 GlnD PII-uridylyltransferase DVS28_RS19335 PF01909 Nucleotidyltransferase domain DVS28_RS19335 PF01966 HD domain DVS28_RS19340 PF00543 Nitrogen regulatory protein P-II DVS28_RS19345 PF00072 Response regulator receiver domain DVS28_RS19345 PF00196 Bacterial regulatory proteins, luxR family DVS28_RS19355 PF02770 Acyl-CoA dehydrogenase, middle domain DVS28_RS19355 PF18158 Adaptive response protein AidB N-terminal domain DVS28_RS19355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DVS28_RS19365 PF01627 Hpt domain DVS28_RS19365 PF00072 Response regulator receiver domain DVS28_RS19365 PF17149 Periplasmic sensor domain found in signal transduction proteins DVS28_RS19365 PF00672 HAMP domain DVS28_RS19365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS19365 PF00512 His Kinase A (phospho-acceptor) domain DVS28_RS19370 PF00072 Response regulator receiver domain DVS28_RS19370 PF00486 Transcriptional regulatory protein, C terminal DVS28_RS19375 PF00293 NUDIX domain DVS28_RS19380 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DVS28_RS19380 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DVS28_RS19385 PF02541 Ppx/GppA phosphatase family DVS28_RS19395 PF13673 Acetyltransferase (GNAT) domain DVS28_RS19405 PF03952 Enolase, N-terminal domain DVS28_RS19405 PF00113 Enolase, C-terminal TIM barrel domain DVS28_RS19410 PF00356 Bacterial regulatory proteins, lacI family DVS28_RS19415 PF03819 MazG nucleotide pyrophosphohydrolase domain DVS28_RS19425 PF17757 UvrB interaction domain DVS28_RS19425 PF03461 TRCF domain DVS28_RS19425 PF00271 Helicase conserved C-terminal domain DVS28_RS19425 PF00270 DEAD/DEAH box helicase DVS28_RS19425 PF02559 CarD-like/TRCF domain DVS28_RS19430 PF08668 HDOD domain DVS28_RS19430 PF00563 EAL domain DVS28_RS19435 PF01195 Peptidyl-tRNA hydrolase DVS28_RS19440 PF01386 Ribosomal L25p family DVS28_RS19440 PF14693 Ribosomal protein TL5, C-terminal domain DVS28_RS19445 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DVS28_RS19445 PF14572 Phosphoribosyl synthetase-associated domain DVS28_RS19450 PF00483 Nucleotidyl transferase DVS28_RS19450 PF00132 Bacterial transferase hexapeptide (six repeats) DVS28_RS19460 PF08544 GHMP kinases C terminal DVS28_RS19460 PF00288 GHMP kinases N terminal domain DVS28_RS19465 PF00398 Ribosomal RNA adenine dimethylase DVS28_RS19470 PF01026 TatD related DNase DVS28_RS19475 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DVS28_RS19475 PF18277 AbrB C-terminal domain DVS28_RS19485 PF00266 Aminotransferase class-V DVS28_RS19505 PF13649 Methyltransferase domain DVS28_RS19520 PF09334 tRNA synthetases class I (M) DVS28_RS19525 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DVS28_RS19530 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase DVS28_RS19530 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase DVS28_RS19550 PF00106 short chain dehydrogenase DVS28_RS19555 PF13823 Alcohol dehydrogenase GroES-associated DVS28_RS19555 PF00107 Zinc-binding dehydrogenase DVS28_RS19555 PF08240 Alcohol dehydrogenase GroES-like domain DVS28_RS19575 PF00994 Probable molybdopterin binding domain DVS28_RS19580 PF01967 MoaC family DVS28_RS19585 PF03453 MoeA N-terminal region (domain I and II) DVS28_RS19585 PF03454 MoeA C-terminal region (domain IV) DVS28_RS19585 PF00994 Probable molybdopterin binding domain DVS28_RS19590 PF00483 Nucleotidyl transferase DVS28_RS19595 PF01812 5-formyltetrahydrofolate cyclo-ligase family DVS28_RS19605 PF01048 Phosphorylase superfamily DVS28_RS19610 PF07739 TipAS antibiotic-recognition domain DVS28_RS19610 PF13411 MerR HTH family regulatory protein DVS28_RS19620 PF02673 Bacitracin resistance protein BacA DVS28_RS19625 PF00005 ABC transporter DVS28_RS19625 PF17755 UvrA DNA-binding domain DVS28_RS19625 PF17760 UvrA interaction domain DVS28_RS19630 PF13847 Methyltransferase domain DVS28_RS19630 PF03551 Transcriptional regulator PadR-like family DVS28_RS19635 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DVS28_RS19655 PF12833 Helix-turn-helix domain DVS28_RS19655 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DVS28_RS19665 PF08240 Alcohol dehydrogenase GroES-like domain DVS28_RS19665 PF00107 Zinc-binding dehydrogenase DVS28_RS19675 PF00665 Integrase core domain DVS28_RS19680 PF00580 UvrD/REP helicase N-terminal domain DVS28_RS19680 PF13361 UvrD-like helicase C-terminal domain DVS28_RS19720 PF08751 TrwC relaxase DVS28_RS19720 PF18272 single-stranded DNA binding TraI N-terminal subdomain DVS28_RS19720 PF07057 DNA helicase TraI DVS28_RS19720 PF18340 DNA relaxase TraI 2B/2B-like domain DVS28_RS19735 PF00565 Staphylococcal nuclease homologue DVS28_RS19740 PF17912 MalK OB fold domain DVS28_RS19740 PF00005 ABC transporter DVS28_RS19745 PF00378 Enoyl-CoA hydratase/isomerase DVS28_RS19750 PF02687 FtsX-like permease family DVS28_RS19750 PF12704 MacB-like periplasmic core domain DVS28_RS19755 PF02687 FtsX-like permease family DVS28_RS19755 PF00005 ABC transporter DVS28_RS19755 PF12704 MacB-like periplasmic core domain DVS28_RS19760 PF00196 Bacterial regulatory proteins, luxR family DVS28_RS19760 PF00072 Response regulator receiver domain DVS28_RS19765 PF07730 Histidine kinase DVS28_RS19785 PF00535 Glycosyl transferase family 2 DVS28_RS19790 PF01593 Flavin containing amine oxidoreductase DVS28_RS19795 PF01066 CDP-alcohol phosphatidyltransferase DVS28_RS19795 PF00483 Nucleotidyl transferase DVS28_RS19800 PF02371 Transposase IS116/IS110/IS902 family DVS28_RS19800 PF01548 Transposase DVS28_RS19805 PF00296 Luciferase-like monooxygenase DVS28_RS19820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS19820 PF00512 His Kinase A (phospho-acceptor) domain DVS28_RS19825 PF00920 Dehydratase family DVS28_RS19830 PF03328 HpcH/HpaI aldolase/citrate lyase family DVS28_RS19835 PF04122 Putative cell wall binding repeat 2 DVS28_RS19835 PF08486 Stage II sporulation protein DVS28_RS19840 PF01464 Transglycosylase SLT domain DVS28_RS19845 PF00155 Aminotransferase class I and II DVS28_RS19850 PF00795 Carbon-nitrogen hydrolase DVS28_RS19855 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS19855 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS19855 PF00563 EAL domain DVS28_RS19860 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS19860 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS19860 PF00563 EAL domain DVS28_RS19870 PF02770 Acyl-CoA dehydrogenase, middle domain DVS28_RS19870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DVS28_RS19870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DVS28_RS19880 PF00512 His Kinase A (phospho-acceptor) domain DVS28_RS19880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS19880 PF00672 HAMP domain DVS28_RS19885 PF00072 Response regulator receiver domain DVS28_RS19885 PF00486 Transcriptional regulatory protein, C terminal DVS28_RS19895 PF01575 MaoC like domain DVS28_RS19910 PF04012 PspA/IM30 family DVS28_RS19930 PF17866 AAA lid domain DVS28_RS19930 PF00004 ATPase family associated with various cellular activities (AAA) DVS28_RS19935 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS19935 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS19935 PF00563 EAL domain DVS28_RS19945 PF00596 Class II Aldolase and Adducin N-terminal domain DVS28_RS19945 PF01008 Initiation factor 2 subunit family DVS28_RS19950 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS19950 PF00563 EAL domain DVS28_RS19950 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS19960 PF17152 Periplasmic sensor domain DVS28_RS19960 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS19985 PF12697 Alpha/beta hydrolase family DVS28_RS20000 PF01433 Peptidase family M1 domain DVS28_RS20000 PF11838 ERAP1-like C-terminal domain DVS28_RS20010 PF04542 Sigma-70 region 2 DVS28_RS20010 PF08281 Sigma-70, region 4 DVS28_RS20015 PF08032 RNA 2'-O ribose methyltransferase substrate binding DVS28_RS20015 PF00588 SpoU rRNA Methylase family DVS28_RS20025 PF02542 YgbB family DVS28_RS20030 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DVS28_RS20040 PF02559 CarD-like/TRCF domain DVS28_RS20045 PF02457 DisA bacterial checkpoint controller nucleotide-binding DVS28_RS20045 PF10635 DisA bacterial checkpoint controller linker region DVS28_RS20045 PF12826 Helix-hairpin-helix motif DVS28_RS20050 PF06965 Na+/H+ antiporter 1 DVS28_RS20060 PF00730 HhH-GPD superfamily base excision DNA repair protein DVS28_RS20060 PF00633 Helix-hairpin-helix motif DVS28_RS20070 PF01939 Endonuclease NucS DVS28_RS20080 PF17871 AAA lid domain DVS28_RS20080 PF00004 ATPase family associated with various cellular activities (AAA) DVS28_RS20080 PF07724 AAA domain (Cdc48 subfamily) DVS28_RS20080 PF02861 Clp amino terminal domain, pathogenicity island component DVS28_RS20080 PF10431 C-terminal, D2-small domain, of ClpB protein DVS28_RS20085 PF00563 EAL domain DVS28_RS20085 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS20085 PF13185 GAF domain DVS28_RS20090 PF01618 MotA/TolQ/ExbB proton channel family DVS28_RS20095 PF13677 Membrane MotB of proton-channel complex MotA/MotB DVS28_RS20095 PF00691 OmpA family DVS28_RS20105 PF08281 Sigma-70, region 4 DVS28_RS20105 PF04542 Sigma-70 region 2 DVS28_RS20110 PF03795 YCII-related domain DVS28_RS20115 PF03795 YCII-related domain DVS28_RS20120 PF00152 tRNA synthetases class II (D, K and N) DVS28_RS20120 PF01336 OB-fold nucleic acid binding domain DVS28_RS20130 PF03309 Type III pantothenate kinase DVS28_RS20135 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DVS28_RS20135 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DVS28_RS20140 PF02261 Aspartate decarboxylase DVS28_RS20145 PF02569 Pantoate-beta-alanine ligase DVS28_RS20160 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DVS28_RS20165 PF02152 Dihydroneopterin aldolase DVS28_RS20170 PF04122 Putative cell wall binding repeat 2 DVS28_RS20170 PF01520 N-acetylmuramoyl-L-alanine amidase DVS28_RS20180 PF00809 Pterin binding enzyme DVS28_RS20185 PF12897 Alanine-glyoxylate amino-transferase DVS28_RS20190 PF01227 GTP cyclohydrolase I DVS28_RS20195 PF00004 ATPase family associated with various cellular activities (AAA) DVS28_RS20195 PF17862 AAA+ lid domain DVS28_RS20195 PF06480 FtsH Extracellular DVS28_RS20195 PF01434 Peptidase family M41 DVS28_RS20200 PF00156 Phosphoribosyl transferase domain DVS28_RS20205 PF01171 PP-loop family DVS28_RS20205 PF09179 TilS substrate binding domain DVS28_RS20230 PF01061 ABC-2 type transporter DVS28_RS20235 PF00005 ABC transporter DVS28_RS20260 PF00480 ROK family DVS28_RS20270 PF17912 MalK OB fold domain DVS28_RS20270 PF00005 ABC transporter DVS28_RS20275 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS20280 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS20290 PF08125 Mannitol dehydrogenase C-terminal domain DVS28_RS20290 PF01232 Mannitol dehydrogenase Rossmann domain DVS28_RS20295 PF08220 DeoR-like helix-turn-helix domain DVS28_RS20295 PF00455 DeoR C terminal sensor domain DVS28_RS20300 PF00459 Inositol monophosphatase family DVS28_RS20305 PF00795 Carbon-nitrogen hydrolase DVS28_RS20305 PF02540 NAD synthase DVS28_RS20310 PF02464 Competence-damaged protein DVS28_RS20310 PF18146 Damage-inducible protein CinA KH domain DVS28_RS20310 PF00994 Probable molybdopterin binding domain DVS28_RS20315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DVS28_RS20320 PF13581 Histidine kinase-like ATPase domain DVS28_RS20325 PF03734 L,D-transpeptidase catalytic domain DVS28_RS20355 PF02515 CoA-transferase family III DVS28_RS20360 PF01475 Ferric uptake regulator family DVS28_RS20365 PF01297 Zinc-uptake complex component A periplasmic DVS28_RS20380 PF01593 Flavin containing amine oxidoreductase DVS28_RS20395 PF00795 Carbon-nitrogen hydrolase DVS28_RS20420 PF01113 Dihydrodipicolinate reductase, N-terminus DVS28_RS20420 PF05173 Dihydrodipicolinate reductase, C-terminus DVS28_RS20425 PF01638 HxlR-like helix-turn-helix DVS28_RS20445 PF13276 HTH-like domain DVS28_RS20445 PF00665 Integrase core domain DVS28_RS20445 PF13333 Integrase core domain DVS28_RS20465 PF01979 Amidohydrolase family DVS28_RS20470 PF01979 Amidohydrolase family DVS28_RS20475 PF01327 Polypeptide deformylase DVS28_RS20485 PF17391 Urocanase N-terminal domain DVS28_RS20485 PF17392 Urocanase C-terminal domain DVS28_RS20485 PF01175 Urocanase Rossmann-like domain DVS28_RS20490 PF00221 Aromatic amino acid lyase DVS28_RS20510 PF12697 Alpha/beta hydrolase family DVS28_RS20515 PF00144 Beta-lactamase DVS28_RS20525 PF05524 PEP-utilising enzyme, N-terminal DVS28_RS20525 PF02896 PEP-utilising enzyme, TIM barrel domain DVS28_RS20525 PF00391 PEP-utilising enzyme, mobile domain DVS28_RS20540 PF00403 Heavy-metal-associated domain DVS28_RS20560 PF00743 Flavin-binding monooxygenase-like DVS28_RS20570 PF01872 RibD C-terminal domain DVS28_RS20575 PF00199 Catalase DVS28_RS20575 PF06628 Catalase-related immune-responsive DVS28_RS20585 PF00067 Cytochrome P450 DVS28_RS20600 PF13193 AMP-binding enzyme C-terminal domain DVS28_RS20600 PF00501 AMP-binding enzyme DVS28_RS20605 PF00378 Enoyl-CoA hydratase/isomerase DVS28_RS20610 PF02770 Acyl-CoA dehydrogenase, middle domain DVS28_RS20610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DVS28_RS20610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DVS28_RS20630 PF04122 Putative cell wall binding repeat 2 DVS28_RS20630 PF01520 N-acetylmuramoyl-L-alanine amidase DVS28_RS20635 PF07690 Major Facilitator Superfamily DVS28_RS20645 PF00378 Enoyl-CoA hydratase/isomerase DVS28_RS20650 PF02803 Thiolase, C-terminal domain DVS28_RS20650 PF00108 Thiolase, N-terminal domain DVS28_RS20675 PF00563 EAL domain DVS28_RS20675 PF08448 PAS fold DVS28_RS20675 PF08447 PAS fold DVS28_RS20675 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS20690 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DVS28_RS20690 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DVS28_RS20700 PF13193 AMP-binding enzyme C-terminal domain DVS28_RS20700 PF00501 AMP-binding enzyme DVS28_RS20715 PF00392 Bacterial regulatory proteins, gntR family DVS28_RS20715 PF07729 FCD domain DVS28_RS20720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DVS28_RS20720 PF02770 Acyl-CoA dehydrogenase, middle domain DVS28_RS20720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DVS28_RS20730 PF01039 Carboxyl transferase domain DVS28_RS20735 PF00378 Enoyl-CoA hydratase/isomerase DVS28_RS20745 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DVS28_RS20745 PF00378 Enoyl-CoA hydratase/isomerase DVS28_RS20745 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DVS28_RS20750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DVS28_RS20750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DVS28_RS20750 PF02770 Acyl-CoA dehydrogenase, middle domain DVS28_RS20755 PF00890 FAD binding domain DVS28_RS20760 PF04226 Transglycosylase associated protein DVS28_RS20775 PF08546 Ketopantoate reductase PanE/ApbA C terminal DVS28_RS20775 PF02558 Ketopantoate reductase PanE/ApbA DVS28_RS20790 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DVS28_RS20790 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DVS28_RS20790 PF00205 Thiamine pyrophosphate enzyme, central domain DVS28_RS20805 PF00925 GTP cyclohydrolase II DVS28_RS20825 PF01070 FMN-dependent dehydrogenase DVS28_RS20835 PF00005 ABC transporter DVS28_RS20835 PF12399 Branched-chain amino acid ATP-binding cassette transporter DVS28_RS20840 PF00005 ABC transporter DVS28_RS20850 PF02653 Branched-chain amino acid transport system / permease component DVS28_RS20860 PF00501 AMP-binding enzyme DVS28_RS20860 PF13193 AMP-binding enzyme C-terminal domain DVS28_RS20890 PF12697 Alpha/beta hydrolase family DVS28_RS20900 PF01261 Xylose isomerase-like TIM barrel DVS28_RS20900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DVS28_RS20905 PF00067 Cytochrome P450 DVS28_RS20910 PF00296 Luciferase-like monooxygenase DVS28_RS20915 PF00355 Rieske [2Fe-2S] domain DVS28_RS20925 PF14759 Reductase C-terminal DVS28_RS20925 PF07992 Pyridine nucleotide-disulphide oxidoreductase DVS28_RS20930 PF02632 BioY family DVS28_RS20950 PF00501 AMP-binding enzyme DVS28_RS20950 PF13193 AMP-binding enzyme C-terminal domain DVS28_RS20955 PF00108 Thiolase, N-terminal domain DVS28_RS20955 PF02803 Thiolase, C-terminal domain DVS28_RS20960 PF07992 Pyridine nucleotide-disulphide oxidoreductase DVS28_RS20960 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DVS28_RS20965 PF02785 Biotin carboxylase C-terminal domain DVS28_RS20965 PF00364 Biotin-requiring enzyme DVS28_RS20965 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DVS28_RS20965 PF00289 Biotin carboxylase, N-terminal domain DVS28_RS20985 PF13193 AMP-binding enzyme C-terminal domain DVS28_RS20985 PF00501 AMP-binding enzyme DVS28_RS20990 PF00890 FAD binding domain DVS28_RS21005 PF13191 AAA ATPase domain DVS28_RS21005 PF00211 Adenylate and Guanylate cyclase catalytic domain DVS28_RS21025 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DVS28_RS21025 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DVS28_RS21050 PF00999 Sodium/hydrogen exchanger family DVS28_RS21055 PF02080 TrkA-C domain DVS28_RS21060 PF00962 Adenosine/AMP deaminase DVS28_RS21065 PF07858 Limonene-1,2-epoxide hydrolase catalytic domain DVS28_RS21075 PF00207 Alpha-2-macroglobulin family DVS28_RS21075 PF07703 Alpha-2-macroglobulin bait region domain DVS28_RS21075 PF01835 MG2 domain DVS28_RS21075 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain DVS28_RS21085 PF01116 Fructose-bisphosphate aldolase class-II DVS28_RS21090 PF17755 UvrA DNA-binding domain DVS28_RS21100 PF01565 FAD binding domain DVS28_RS21100 PF08031 Berberine and berberine like DVS28_RS21105 PF03704 Bacterial transcriptional activator domain DVS28_RS21105 PF00486 Transcriptional regulatory protein, C terminal DVS28_RS21105 PF00498 FHA domain DVS28_RS21115 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system DVS28_RS21125 PF00563 EAL domain DVS28_RS21125 PF01590 GAF domain DVS28_RS21125 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS21125 PF00360 Phytochrome region DVS28_RS21135 PF00196 Bacterial regulatory proteins, luxR family DVS28_RS21155 PF00248 Aldo/keto reductase family DVS28_RS21160 PF01329 Pterin 4 alpha carbinolamine dehydratase DVS28_RS21175 PF07729 FCD domain DVS28_RS21175 PF00392 Bacterial regulatory proteins, gntR family DVS28_RS21180 PF03253 Urea transporter DVS28_RS21185 PF01774 UreD urease accessory protein DVS28_RS21190 PF02492 CobW/HypB/UreG, nucleotide-binding domain DVS28_RS21195 PF01730 UreF DVS28_RS21200 PF02814 UreE urease accessory protein, N-terminal domain DVS28_RS21200 PF05194 UreE urease accessory protein, C-terminal domain DVS28_RS21210 PF01979 Amidohydrolase family DVS28_RS21210 PF00449 Urease alpha-subunit, N-terminal domain DVS28_RS21215 PF00699 Urease beta subunit DVS28_RS21215 PF00547 Urease, gamma subunit DVS28_RS21220 PF00547 Urease, gamma subunit DVS28_RS21230 PF00872 Transposase, Mutator family DVS28_RS21255 PF01546 Peptidase family M20/M25/M40 DVS28_RS21255 PF07687 Peptidase dimerisation domain DVS28_RS21260 PF01266 FAD dependent oxidoreductase DVS28_RS21265 PF01545 Cation efflux family DVS28_RS21265 PF16916 Dimerisation domain of Zinc Transporter DVS28_RS21270 PF01475 Ferric uptake regulator family DVS28_RS21275 PF00291 Pyridoxal-phosphate dependent enzyme DVS28_RS21280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DVS28_RS21285 PF00005 ABC transporter DVS28_RS21285 PF09383 NIL domain DVS28_RS21290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DVS28_RS21290 PF00005 ABC transporter DVS28_RS21295 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS21300 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS21315 PF04444 Catechol dioxygenase N terminus DVS28_RS21315 PF00775 Dioxygenase DVS28_RS21320 PF01738 Dienelactone hydrolase family DVS28_RS21325 PF13378 Enolase C-terminal domain-like DVS28_RS21325 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DVS28_RS21330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DVS28_RS21330 PF03466 LysR substrate binding domain DVS28_RS21335 PF00465 Iron-containing alcohol dehydrogenase DVS28_RS21340 PF01144 Coenzyme A transferase DVS28_RS21345 PF01144 Coenzyme A transferase DVS28_RS21350 PF11723 Homotrimeric ring hydroxylase DVS28_RS21350 PF00355 Rieske [2Fe-2S] domain DVS28_RS21355 PF00440 Bacterial regulatory proteins, tetR family DVS28_RS21365 PF01494 FAD binding domain DVS28_RS21385 PF08443 RimK-like ATP-grasp domain DVS28_RS21385 PF08245 Mur ligase middle domain DVS28_RS21385 PF02875 Mur ligase family, glutamate ligase domain DVS28_RS21390 PF07722 Peptidase C26 DVS28_RS21395 PF04107 Glutamate-cysteine ligase family 2(GCS2) DVS28_RS21400 PF00072 Response regulator receiver domain DVS28_RS21410 PF02223 Thymidylate kinase DVS28_RS21415 PF01131 DNA topoisomerase DVS28_RS21415 PF01751 Toprim domain DVS28_RS21415 PF13368 Topoisomerase C-terminal repeat DVS28_RS21420 PF13286 Phosphohydrolase-associated domain DVS28_RS21420 PF01966 HD domain DVS28_RS21425 PF00082 Subtilase family DVS28_RS21430 PF08447 PAS fold DVS28_RS21430 PF00563 EAL domain DVS28_RS21430 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS21430 PF08448 PAS fold DVS28_RS21435 PF03030 Inorganic H+ pyrophosphatase DVS28_RS21445 PF01370 NAD dependent epimerase/dehydratase family DVS28_RS21455 PF07729 FCD domain DVS28_RS21455 PF00392 Bacterial regulatory proteins, gntR family DVS28_RS21475 PF13581 Histidine kinase-like ATPase domain DVS28_RS21480 PF01740 STAS domain DVS28_RS21515 PF00437 Type II/IV secretion system protein DVS28_RS21535 PF10759 Protein of unknown function (DUF2587) DVS28_RS21540 PF00085 Thioredoxin DVS28_RS21545 PF03061 Thioesterase superfamily DVS28_RS21555 PF00512 His Kinase A (phospho-acceptor) domain DVS28_RS21555 PF00360 Phytochrome region DVS28_RS21555 PF01590 GAF domain DVS28_RS21555 PF08446 PAS fold DVS28_RS21555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS21560 PF01220 Dehydroquinase class II DVS28_RS21570 PF00501 AMP-binding enzyme DVS28_RS21570 PF13193 AMP-binding enzyme C-terminal domain DVS28_RS21595 PF13409 Glutathione S-transferase, N-terminal domain DVS28_RS21605 PF13732 Domain of unknown function (DUF4162) DVS28_RS21605 PF00005 ABC transporter DVS28_RS21610 PF04209 homogentisate 1,2-dioxygenase DVS28_RS21620 PF02371 Transposase IS116/IS110/IS902 family DVS28_RS21620 PF01548 Transposase DVS28_RS21625 PF01546 Peptidase family M20/M25/M40 DVS28_RS21650 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DVS28_RS21650 PF16078 2-oxoglutarate dehydrogenase N-terminus DVS28_RS21650 PF00676 Dehydrogenase E1 component DVS28_RS21650 PF16870 2-oxoglutarate dehydrogenase C-terminal DVS28_RS21650 PF02779 Transketolase, pyrimidine binding domain DVS28_RS21655 PF02127 Aminopeptidase I zinc metalloprotease (M18) DVS28_RS21660 PF01594 AI-2E family transporter DVS28_RS21665 PF01168 Alanine racemase, N-terminal domain DVS28_RS21665 PF00842 Alanine racemase, C-terminal domain DVS28_RS21670 PF03853 YjeF-related protein N-terminus DVS28_RS21670 PF01256 Carbohydrate kinase DVS28_RS21675 PF01648 4'-phosphopantetheinyl transferase superfamily DVS28_RS21680 PF01380 SIS domain DVS28_RS21705 PF00005 ABC transporter DVS28_RS21710 PF00881 Nitroreductase family DVS28_RS21710 PF01996 F420-0:Gamma-glutamyl ligase DVS28_RS21715 PF00296 Luciferase-like monooxygenase DVS28_RS21720 PF01933 Uncharacterised protein family UPF0052 DVS28_RS21730 PF04055 Radical SAM superfamily DVS28_RS21780 PF00756 Putative esterase DVS28_RS21780 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase DVS28_RS21785 PF10503 Esterase PHB depolymerase DVS28_RS21790 PF02687 FtsX-like permease family DVS28_RS21790 PF00005 ABC transporter DVS28_RS21790 PF12704 MacB-like periplasmic core domain DVS28_RS21845 PF00480 ROK family DVS28_RS21850 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DVS28_RS21850 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DVS28_RS21850 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DVS28_RS21850 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DVS28_RS21855 PF00380 Ribosomal protein S9/S16 DVS28_RS21860 PF00572 Ribosomal protein L13 DVS28_RS21865 PF01965 DJ-1/PfpI family DVS28_RS21875 PF01416 tRNA pseudouridine synthase DVS28_RS21880 PF01196 Ribosomal protein L17 DVS28_RS21885 PF01000 RNA polymerase Rpb3/RpoA insert domain DVS28_RS21885 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DVS28_RS21885 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DVS28_RS21890 PF00163 Ribosomal protein S4/S9 N-terminal domain DVS28_RS21890 PF01479 S4 domain DVS28_RS21895 PF00411 Ribosomal protein S11 DVS28_RS21900 PF00416 Ribosomal protein S13/S18 DVS28_RS21905 PF00557 Metallopeptidase family M24 DVS28_RS21920 PF00344 SecY translocase DVS28_RS21925 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DVS28_RS21930 PF00327 Ribosomal protein L30p/L7e DVS28_RS21935 PF00333 Ribosomal protein S5, N-terminal domain DVS28_RS21935 PF03719 Ribosomal protein S5, C-terminal domain DVS28_RS21940 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DVS28_RS21945 PF00347 Ribosomal protein L6 DVS28_RS21950 PF00410 Ribosomal protein S8 DVS28_RS21955 PF00673 ribosomal L5P family C-terminus DVS28_RS21955 PF00281 Ribosomal protein L5 DVS28_RS21960 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DVS28_RS21960 PF00467 KOW motif DVS28_RS21965 PF00238 Ribosomal protein L14p/L23e DVS28_RS21970 PF00366 Ribosomal protein S17 DVS28_RS21975 PF00831 Ribosomal L29 protein DVS28_RS21980 PF00252 Ribosomal protein L16p/L10e DVS28_RS21985 PF07650 KH domain DVS28_RS21985 PF00189 Ribosomal protein S3, C-terminal domain DVS28_RS21990 PF00237 Ribosomal protein L22p/L17e DVS28_RS21995 PF00203 Ribosomal protein S19 DVS28_RS22000 PF03947 Ribosomal Proteins L2, C-terminal domain DVS28_RS22000 PF00181 Ribosomal Proteins L2, RNA binding domain DVS28_RS22005 PF00276 Ribosomal protein L23 DVS28_RS22010 PF00573 Ribosomal protein L4/L1 family DVS28_RS22015 PF00297 Ribosomal protein L3 DVS28_RS22020 PF00338 Ribosomal protein S10p/S20e DVS28_RS22025 PF00009 Elongation factor Tu GTP binding domain DVS28_RS22025 PF03143 Elongation factor Tu C-terminal domain DVS28_RS22025 PF03144 Elongation factor Tu domain 2 DVS28_RS22030 PF03764 Elongation factor G, domain IV DVS28_RS22030 PF03144 Elongation factor Tu domain 2 DVS28_RS22030 PF14492 Elongation Factor G, domain II DVS28_RS22030 PF00009 Elongation factor Tu GTP binding domain DVS28_RS22030 PF00679 Elongation factor G C-terminus DVS28_RS22035 PF00177 Ribosomal protein S7p/S5e DVS28_RS22040 PF00164 Ribosomal protein S12/S23 DVS28_RS22055 PF02225 PA domain DVS28_RS22055 PF04389 Peptidase family M28 DVS28_RS22060 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP DVS28_RS22060 PF12557 Cob(I)alamin adenosyltransferase N terminal DVS28_RS22065 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DVS28_RS22065 PF07685 CobB/CobQ-like glutamine amidotransferase domain DVS28_RS22090 PF03372 Endonuclease/Exonuclease/phosphatase family DVS28_RS22115 PF05000 RNA polymerase Rpb1, domain 4 DVS28_RS22115 PF04998 RNA polymerase Rpb1, domain 5 DVS28_RS22115 PF04997 RNA polymerase Rpb1, domain 1 DVS28_RS22115 PF00623 RNA polymerase Rpb1, domain 2 DVS28_RS22115 PF04983 RNA polymerase Rpb1, domain 3 DVS28_RS22120 PF04565 RNA polymerase Rpb2, domain 3 DVS28_RS22120 PF04563 RNA polymerase beta subunit DVS28_RS22120 PF04560 RNA polymerase Rpb2, domain 7 DVS28_RS22120 PF00562 RNA polymerase Rpb2, domain 6 DVS28_RS22120 PF10385 RNA polymerase beta subunit external 1 domain DVS28_RS22120 PF04561 RNA polymerase Rpb2, domain 2 DVS28_RS22125 PF16320 Ribosomal protein L7/L12 dimerisation domain DVS28_RS22125 PF00542 Ribosomal protein L7/L12 C-terminal domain DVS28_RS22130 PF00466 Ribosomal protein L10 DVS28_RS22135 PF00465 Iron-containing alcohol dehydrogenase DVS28_RS22135 PF00171 Aldehyde dehydrogenase family DVS28_RS22145 PF01734 Patatin-like phospholipase DVS28_RS22145 PF00027 Cyclic nucleotide-binding domain DVS28_RS22160 PF07732 Multicopper oxidase DVS28_RS22165 PF00144 Beta-lactamase DVS28_RS22175 PF00687 Ribosomal protein L1p/L10e family DVS28_RS22180 PF03946 Ribosomal protein L11, N-terminal domain DVS28_RS22180 PF00298 Ribosomal protein L11, RNA binding domain DVS28_RS22185 PF02357 Transcription termination factor nusG DVS28_RS22190 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DVS28_RS22200 PF00707 Translation initiation factor IF-3, C-terminal domain DVS28_RS22200 PF05198 Translation initiation factor IF-3, N-terminal domain DVS28_RS22205 PF03144 Elongation factor Tu domain 2 DVS28_RS22205 PF03143 Elongation factor Tu C-terminal domain DVS28_RS22205 PF00009 Elongation factor Tu GTP binding domain DVS28_RS22225 PF04461 Protein of unknown function (DUF520) DVS28_RS22230 PF01435 Peptidase family M48 DVS28_RS22240 PF00361 Proton-conducting membrane transporter DVS28_RS22245 PF00361 Proton-conducting membrane transporter DVS28_RS22245 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus DVS28_RS22250 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus DVS28_RS22250 PF00361 Proton-conducting membrane transporter DVS28_RS22250 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DVS28_RS22255 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DVS28_RS22260 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DVS28_RS22265 PF00037 4Fe-4S binding domain DVS28_RS22270 PF00146 NADH dehydrogenase DVS28_RS22275 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DVS28_RS22280 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DVS28_RS22285 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DVS28_RS22290 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DVS28_RS22295 PF00082 Subtilase family DVS28_RS22310 PF10604 Polyketide cyclase / dehydrase and lipid transport DVS28_RS22330 PF00348 Polyprenyl synthetase DVS28_RS22335 PF00361 Proton-conducting membrane transporter DVS28_RS22340 PF00361 Proton-conducting membrane transporter DVS28_RS22340 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus DVS28_RS22345 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DVS28_RS22345 PF00361 Proton-conducting membrane transporter DVS28_RS22350 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DVS28_RS22355 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DVS28_RS22365 PF00146 NADH dehydrogenase DVS28_RS22370 PF01568 Molydopterin dinucleotide binding domain DVS28_RS22370 PF00384 Molybdopterin oxidoreductase DVS28_RS22370 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DVS28_RS22375 PF10531 SLBB domain DVS28_RS22375 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DVS28_RS22375 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DVS28_RS22385 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DVS28_RS22390 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DVS28_RS22400 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DVS28_RS22405 PF07690 Major Facilitator Superfamily DVS28_RS22415 PF01850 PIN domain DVS28_RS22425 PF03976 Polyphosphate kinase 2 (PPK2) DVS28_RS22450 PF16656 Purple acid Phosphatase, N-terminal domain DVS28_RS22450 PF00149 Calcineurin-like phosphoesterase DVS28_RS22460 PF03824 High-affinity nickel-transport protein DVS28_RS22470 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS22475 PF00005 ABC transporter DVS28_RS22475 PF00571 CBS domain DVS28_RS22480 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS22515 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DVS28_RS22515 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DVS28_RS22520 PF03009 Glycerophosphoryl diester phosphodiesterase family DVS28_RS22530 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DVS28_RS22530 PF00326 Prolyl oligopeptidase family DVS28_RS22535 PF01494 FAD binding domain DVS28_RS22540 PF00311 Phosphoenolpyruvate carboxylase DVS28_RS22545 PF00444 Ribosomal protein L36 DVS28_RS22550 PF01209 ubiE/COQ5 methyltransferase family DVS28_RS22555 PF01979 Amidohydrolase family DVS28_RS22565 PF13411 MerR HTH family regulatory protein DVS28_RS22570 PF00425 chorismate binding enzyme DVS28_RS22580 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DVS28_RS22580 PF16582 Middle domain of thiamine pyrophosphate DVS28_RS22585 PF13378 Enolase C-terminal domain-like DVS28_RS22585 PF18374 Enolase N-terminal domain-like DVS28_RS22590 PF01040 UbiA prenyltransferase family DVS28_RS22595 PF13193 AMP-binding enzyme C-terminal domain DVS28_RS22595 PF00501 AMP-binding enzyme DVS28_RS22610 PF00005 ABC transporter DVS28_RS22620 PF01757 Acyltransferase family DVS28_RS22625 PF01177 Asp/Glu/Hydantoin racemase DVS28_RS22630 PF00924 Mechanosensitive ion channel DVS28_RS22640 PF01202 Shikimate kinase DVS28_RS22660 PF01578 Cytochrome C assembly protein DVS28_RS22665 PF05140 ResB-like family DVS28_RS22670 PF02683 Cytochrome C biogenesis protein transmembrane region DVS28_RS22675 PF00085 Thioredoxin DVS28_RS22685 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DVS28_RS22685 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP DVS28_RS22700 PF00033 Cytochrome b/b6/petB DVS28_RS22715 PF00578 AhpC/TSA family DVS28_RS22720 PF12419 SNF2 Helicase protein DVS28_RS22720 PF00176 SNF2 family N-terminal domain DVS28_RS22720 PF00271 Helicase conserved C-terminal domain DVS28_RS22725 PF01979 Amidohydrolase family DVS28_RS22725 PF13382 Adenine deaminase C-terminal domain DVS28_RS22730 PF00202 Aminotransferase class-III DVS28_RS22765 PF02602 Uroporphyrinogen-III synthase HemD DVS28_RS22765 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DVS28_RS22770 PF03900 Porphobilinogen deaminase, C-terminal domain DVS28_RS22770 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DVS28_RS22775 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DVS28_RS22775 PF01488 Shikimate / quinate 5-dehydrogenase DVS28_RS22775 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DVS28_RS22785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DVS28_RS22785 PF02770 Acyl-CoA dehydrogenase, middle domain DVS28_RS22785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DVS28_RS22805 PF00004 ATPase family associated with various cellular activities (AAA) DVS28_RS22805 PF17871 AAA lid domain DVS28_RS22805 PF07724 AAA domain (Cdc48 subfamily) DVS28_RS22805 PF02861 Clp amino terminal domain, pathogenicity island component DVS28_RS22805 PF10431 C-terminal, D2-small domain, of ClpB protein DVS28_RS22810 PF12849 PBP superfamily domain DVS28_RS22815 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS22820 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS22830 PF14403 Circularly permuted ATP-grasp type 2 DVS28_RS22835 PF14403 Circularly permuted ATP-grasp type 2 DVS28_RS22835 PF04168 A predicted alpha-helical domain with a conserved ER motif. DVS28_RS22845 PF14403 Circularly permuted ATP-grasp type 2 DVS28_RS22845 PF04168 A predicted alpha-helical domain with a conserved ER motif. DVS28_RS22850 PF08379 Bacterial transglutaminase-like N-terminal region DVS28_RS22850 PF01841 Transglutaminase-like superfamily DVS28_RS22860 PF16123 Hydroxyacylglutathione hydrolase C-terminus DVS28_RS22860 PF00753 Metallo-beta-lactamase superfamily DVS28_RS22870 PF00550 Phosphopantetheine attachment site DVS28_RS22870 PF00501 AMP-binding enzyme DVS28_RS22870 PF13193 AMP-binding enzyme C-terminal domain DVS28_RS22885 PF01039 Carboxyl transferase domain DVS28_RS22895 PF02146 Sir2 family DVS28_RS22900 PF00067 Cytochrome P450 DVS28_RS22910 PF03109 ABC1 family DVS28_RS22925 PF00107 Zinc-binding dehydrogenase DVS28_RS22925 PF08240 Alcohol dehydrogenase GroES-like domain DVS28_RS22935 PF00535 Glycosyl transferase family 2 DVS28_RS22935 PF13181 Tetratricopeptide repeat DVS28_RS22940 PF00296 Luciferase-like monooxygenase DVS28_RS22960 PF00501 AMP-binding enzyme DVS28_RS22960 PF13193 AMP-binding enzyme C-terminal domain DVS28_RS22965 PF00809 Pterin binding enzyme DVS28_RS22990 PF02803 Thiolase, C-terminal domain DVS28_RS22990 PF00108 Thiolase, N-terminal domain DVS28_RS23005 PF00491 Arginase family DVS28_RS23015 PF02683 Cytochrome C biogenesis protein transmembrane region DVS28_RS23015 PF11412 Disulphide bond corrector protein DsbC DVS28_RS23020 PF01323 DSBA-like thioredoxin domain DVS28_RS23035 PF00294 pfkB family carbohydrate kinase DVS28_RS23050 PF01475 Ferric uptake regulator family DVS28_RS23055 PF13190 PDGLE domain DVS28_RS23055 PF01891 Cobalt uptake substrate-specific transmembrane region DVS28_RS23065 PF00005 ABC transporter DVS28_RS23070 PF00171 Aldehyde dehydrogenase family DVS28_RS23110 PF01625 Peptide methionine sulfoxide reductase DVS28_RS23115 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DVS28_RS23115 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DVS28_RS23125 PF13382 Adenine deaminase C-terminal domain DVS28_RS23125 PF01979 Amidohydrolase family DVS28_RS23135 PF01230 HIT domain DVS28_RS23150 PF13936 Helix-turn-helix domain DVS28_RS23150 PF00665 Integrase core domain DVS28_RS23190 PF04286 Protein of unknown function (DUF445) DVS28_RS23200 PF00535 Glycosyl transferase family 2 DVS28_RS23205 PF01053 Cys/Met metabolism PLP-dependent enzyme DVS28_RS23215 PF00501 AMP-binding enzyme DVS28_RS23215 PF13193 AMP-binding enzyme C-terminal domain DVS28_RS23235 PF00561 alpha/beta hydrolase fold DVS28_RS23240 PF01791 DeoC/LacD family aldolase DVS28_RS23255 PF00291 Pyridoxal-phosphate dependent enzyme DVS28_RS23265 PF00709 Adenylosuccinate synthetase DVS28_RS23275 PF00155 Aminotransferase class I and II DVS28_RS23285 PF13407 Periplasmic binding protein domain DVS28_RS23290 PF02653 Branched-chain amino acid transport system / permease component DVS28_RS23295 PF00005 ABC transporter DVS28_RS23300 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DVS28_RS23300 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DVS28_RS23310 PF01325 Iron dependent repressor, N-terminal DNA binding domain DVS28_RS23310 PF00480 ROK family DVS28_RS23320 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DVS28_RS23320 PF02844 Phosphoribosylglycinamide synthetase, N domain DVS28_RS23320 PF02843 Phosphoribosylglycinamide synthetase, C domain DVS28_RS23325 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DVS28_RS23325 PF12833 Helix-turn-helix domain DVS28_RS23330 PF00743 Flavin-binding monooxygenase-like DVS28_RS23345 PF10397 Adenylosuccinate lyase C-terminus DVS28_RS23345 PF00206 Lyase DVS28_RS23355 PF02629 CoA binding domain DVS28_RS23355 PF06971 Putative DNA-binding protein N-terminus DVS28_RS23370 PF00501 AMP-binding enzyme DVS28_RS23370 PF13193 AMP-binding enzyme C-terminal domain DVS28_RS23375 PF01261 Xylose isomerase-like TIM barrel DVS28_RS23380 PF01565 FAD binding domain DVS28_RS23380 PF02913 FAD linked oxidases, C-terminal domain DVS28_RS23400 PF13742 OB-fold nucleic acid binding domain DVS28_RS23400 PF02601 Exonuclease VII, large subunit DVS28_RS23405 PF01553 Acyltransferase DVS28_RS23410 PF01370 NAD dependent epimerase/dehydratase family DVS28_RS23420 PF00850 Histone deacetylase domain DVS28_RS23425 PF04122 Putative cell wall binding repeat 2 DVS28_RS23425 PF01520 N-acetylmuramoyl-L-alanine amidase DVS28_RS23430 PF03807 NADP oxidoreductase coenzyme F420-dependent DVS28_RS23430 PF14748 Pyrroline-5-carboxylate reductase dimerisation DVS28_RS23435 PF10722 Putative bacterial sensory transduction regulator DVS28_RS23440 PF00534 Glycosyl transferases group 1 DVS28_RS23440 PF13439 Glycosyltransferase Family 4 DVS28_RS23450 PF01381 Helix-turn-helix DVS28_RS23475 PF00578 AhpC/TSA family DVS28_RS23480 PF00563 EAL domain DVS28_RS23480 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS23480 PF13426 PAS domain DVS28_RS23485 PF00563 EAL domain DVS28_RS23485 PF13185 GAF domain DVS28_RS23485 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS23500 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DVS28_RS23500 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DVS28_RS23505 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DVS28_RS23505 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DVS28_RS23510 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DVS28_RS23530 PF01507 Phosphoadenosine phosphosulfate reductase family DVS28_RS23565 PF00486 Transcriptional regulatory protein, C terminal DVS28_RS23575 PF00583 Acetyltransferase (GNAT) family DVS28_RS23600 PF14659 Phage integrase, N-terminal SAM-like domain DVS28_RS23600 PF00589 Phage integrase family DVS28_RS23730 PF02567 Phenazine biosynthesis-like protein DVS28_RS23745 PF00561 alpha/beta hydrolase fold DVS28_RS23755 PF00561 alpha/beta hydrolase fold DVS28_RS23765 PF04539 Sigma-70 region 3 DVS28_RS23765 PF04545 Sigma-70, region 4 DVS28_RS23765 PF04542 Sigma-70 region 2 DVS28_RS23770 PF01544 CorA-like Mg2+ transporter protein DVS28_RS23775 PF00067 Cytochrome P450 DVS28_RS23780 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DVS28_RS23780 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DVS28_RS23790 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DVS28_RS23790 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DVS28_RS23800 PF07501 G5 domain DVS28_RS23800 PF06737 Transglycosylase-like domain DVS28_RS23800 PF03990 G5-linked-Ubiquitin-like domain DVS28_RS23810 PF02515 CoA-transferase family III DVS28_RS23815 PF01638 HxlR-like helix-turn-helix DVS28_RS23825 PF00551 Formyl transferase DVS28_RS23835 PF00676 Dehydrogenase E1 component DVS28_RS23840 PF01037 Lrp/AsnC ligand binding domain DVS28_RS23845 PF01068 ATP dependent DNA ligase domain DVS28_RS23845 PF13298 DNA polymerase Ligase (LigD) DVS28_RS23845 PF04679 ATP dependent DNA ligase C terminal region DVS28_RS23850 PF00106 short chain dehydrogenase DVS28_RS23860 PF07689 KaiB domain DVS28_RS23865 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DVS28_RS23865 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DVS28_RS23870 PF02769 AIR synthase related protein, C-terminal domain DVS28_RS23870 PF00586 AIR synthase related protein, N-terminal domain DVS28_RS23875 PF00156 Phosphoribosyl transferase domain DVS28_RS23885 PF02769 AIR synthase related protein, C-terminal domain DVS28_RS23885 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DVS28_RS23885 PF00586 AIR synthase related protein, N-terminal domain DVS28_RS23905 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase DVS28_RS23910 PF01259 SAICAR synthetase DVS28_RS23915 PF00708 Acylphosphatase DVS28_RS23920 PF04679 ATP dependent DNA ligase C terminal region DVS28_RS23920 PF01068 ATP dependent DNA ligase domain DVS28_RS23920 PF13298 DNA polymerase Ligase (LigD) DVS28_RS23930 PF02222 ATP-grasp domain DVS28_RS23930 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DVS28_RS23935 PF00731 AIR carboxylase DVS28_RS23940 PF02954 Bacterial regulatory protein, Fis family DVS28_RS23940 PF01590 GAF domain DVS28_RS23940 PF00158 Sigma-54 interaction domain DVS28_RS23945 PF00583 Acetyltransferase (GNAT) family DVS28_RS23970 PF12833 Helix-turn-helix domain DVS28_RS23970 PF02311 AraC-like ligand binding domain DVS28_RS23985 PF01593 Flavin containing amine oxidoreductase DVS28_RS23990 PF00149 Calcineurin-like phosphoesterase DVS28_RS23995 PF12695 Alpha/beta hydrolase family DVS28_RS24000 PF00391 PEP-utilising enzyme, mobile domain DVS28_RS24000 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DVS28_RS24005 PF00764 Arginosuccinate synthase DVS28_RS24035 PF00180 Isocitrate/isopropylmalate dehydrogenase DVS28_RS24040 PF00005 ABC transporter DVS28_RS24040 PF08402 TOBE domain DVS28_RS24045 PF17912 MalK OB fold domain DVS28_RS24045 PF00005 ABC transporter DVS28_RS24050 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS24055 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS24065 PF07859 alpha/beta hydrolase fold DVS28_RS24075 PF01965 DJ-1/PfpI family DVS28_RS24080 PF07729 FCD domain DVS28_RS24080 PF00392 Bacterial regulatory proteins, gntR family DVS28_RS24085 PF00171 Aldehyde dehydrogenase family DVS28_RS24100 PF00437 Type II/IV secretion system protein DVS28_RS24130 PF03641 Possible lysine decarboxylase DVS28_RS24135 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DVS28_RS24135 PF00117 Glutamine amidotransferase class-I DVS28_RS24140 PF00436 Single-strand binding protein family DVS28_RS24145 PF01250 Ribosomal protein S6 DVS28_RS24150 PF00436 Single-strand binding protein family DVS28_RS24155 PF01451 Low molecular weight phosphotyrosine protein phosphatase DVS28_RS24160 PF01451 Low molecular weight phosphotyrosine protein phosphatase DVS28_RS24170 PF01084 Ribosomal protein S18 DVS28_RS24175 PF03948 Ribosomal protein L9, C-terminal domain DVS28_RS24175 PF01281 Ribosomal protein L9, N-terminal domain DVS28_RS24180 PF03315 Serine dehydratase beta chain DVS28_RS24180 PF03313 Serine dehydratase alpha chain DVS28_RS24185 PF00772 DnaB-like helicase N terminal domain DVS28_RS24185 PF03796 DnaB-like helicase C terminal domain DVS28_RS24190 PF00881 Nitroreductase family DVS28_RS24190 PF01996 F420-0:Gamma-glutamyl ligase DVS28_RS24210 PF08281 Sigma-70, region 4 DVS28_RS24210 PF12680 SnoaL-like domain DVS28_RS24210 PF04542 Sigma-70 region 2 DVS28_RS24215 PF08281 Sigma-70, region 4 DVS28_RS24215 PF04542 Sigma-70 region 2 DVS28_RS24220 PF00266 Aminotransferase class-V DVS28_RS24235 PF01594 AI-2E family transporter DVS28_RS24240 PF01642 Methylmalonyl-CoA mutase DVS28_RS24240 PF02310 B12 binding domain DVS28_RS24245 PF01047 MarR family DVS28_RS24285 PF00665 Integrase core domain DVS28_RS24285 PF13936 Helix-turn-helix domain DVS28_RS24300 PF17863 AAA lid domain DVS28_RS24300 PF07726 ATPase family associated with various cellular activities (AAA) DVS28_RS24315 PF00005 ABC transporter DVS28_RS24315 PF13732 Domain of unknown function (DUF4162) DVS28_RS24325 PF00535 Glycosyl transferase family 2 DVS28_RS24355 PF07732 Multicopper oxidase DVS28_RS24405 PF00106 short chain dehydrogenase DVS28_RS24420 PF00324 Amino acid permease DVS28_RS24435 PF01145 SPFH domain / Band 7 family DVS28_RS24470 PF00561 alpha/beta hydrolase fold DVS28_RS24480 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DVS28_RS24480 PF07992 Pyridine nucleotide-disulphide oxidoreductase DVS28_RS24490 PF01740 STAS domain DVS28_RS24490 PF00916 Sulfate permease family DVS28_RS24495 PF16123 Hydroxyacylglutathione hydrolase C-terminus DVS28_RS24495 PF00753 Metallo-beta-lactamase superfamily DVS28_RS24510 PF07969 Amidohydrolase family DVS28_RS24515 PF00144 Beta-lactamase DVS28_RS24540 PF01728 FtsJ-like methyltransferase DVS28_RS24540 PF18125 RlmM ferredoxin-like domain DVS28_RS24550 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DVS28_RS24550 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DVS28_RS24550 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal DVS28_RS24560 PF00588 SpoU rRNA Methylase family DVS28_RS24565 PF03009 Glycerophosphoryl diester phosphodiesterase family DVS28_RS24580 PF16655 PhoD-like phosphatase, N-terminal domain DVS28_RS24580 PF09423 PhoD-like phosphatase DVS28_RS24585 PF03009 Glycerophosphoryl diester phosphodiesterase family DVS28_RS24590 PF09423 PhoD-like phosphatase DVS28_RS24590 PF16655 PhoD-like phosphatase, N-terminal domain DVS28_RS24595 PF09423 PhoD-like phosphatase DVS28_RS24595 PF16655 PhoD-like phosphatase, N-terminal domain DVS28_RS24600 PF00248 Aldo/keto reductase family DVS28_RS24605 PF13193 AMP-binding enzyme C-terminal domain DVS28_RS24605 PF00501 AMP-binding enzyme DVS28_RS24610 PF03435 Saccharopine dehydrogenase NADP binding domain DVS28_RS24630 PF03176 MMPL family DVS28_RS24670 PF00106 short chain dehydrogenase DVS28_RS24680 PF01169 Uncharacterized protein family UPF0016 DVS28_RS24685 PF00889 Elongation factor TS DVS28_RS24690 PF00692 dUTPase DVS28_RS24695 PF00561 alpha/beta hydrolase fold DVS28_RS24700 PF01037 Lrp/AsnC ligand binding domain DVS28_RS24705 PF01055 Glycosyl hydrolases family 31 DVS28_RS24710 PF02754 Cysteine-rich domain DVS28_RS24710 PF13183 4Fe-4S dicluster domain DVS28_RS24715 PF01593 Flavin containing amine oxidoreductase DVS28_RS24720 PF00196 Bacterial regulatory proteins, luxR family DVS28_RS24720 PF00072 Response regulator receiver domain DVS28_RS24725 PF07730 Histidine kinase DVS28_RS24725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVS28_RS24735 PF00528 Binding-protein-dependent transport system inner membrane component DVS28_RS24745 PF08402 TOBE domain DVS28_RS24745 PF00005 ABC transporter DVS28_RS24760 PF00561 alpha/beta hydrolase fold DVS28_RS24770 PF01483 Proprotein convertase P-domain DVS28_RS24770 PF04389 Peptidase family M28 DVS28_RS24790 PF00012 Hsp70 protein DVS28_RS24795 PF01025 GrpE DVS28_RS24800 PF00684 DnaJ central domain DVS28_RS24800 PF00226 DnaJ domain DVS28_RS24800 PF01556 DnaJ C terminal domain DVS28_RS24805 PF13411 MerR HTH family regulatory protein DVS28_RS24845 PF00106 short chain dehydrogenase DVS28_RS24860 PF05175 Methyltransferase small domain DVS28_RS24860 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus DVS28_RS24865 PF02272 DHHA1 domain DVS28_RS24865 PF01411 tRNA synthetases class II (A) DVS28_RS24865 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DVS28_RS24870 PF13649 Methyltransferase domain DVS28_RS24875 PF00106 short chain dehydrogenase DVS28_RS24885 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP DVS28_RS24885 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DVS28_RS24890 PF00355 Rieske [2Fe-2S] domain DVS28_RS24895 PF13631 Cytochrome b(N-terminal)/b6/petB DVS28_RS24925 PF00534 Glycosyl transferases group 1 DVS28_RS24925 PF13579 Glycosyl transferase 4-like domain DVS28_RS24930 PF00534 Glycosyl transferases group 1 DVS28_RS24930 PF13439 Glycosyltransferase Family 4 DVS28_RS24935 PF00912 Transglycosylase DVS28_RS24935 PF00905 Penicillin binding protein transpeptidase domain DVS28_RS24950 PF01658 Myo-inositol-1-phosphate synthase DVS28_RS24960 PF02803 Thiolase, C-terminal domain DVS28_RS24960 PF00108 Thiolase, N-terminal domain DVS28_RS24965 PF12146 Serine aminopeptidase, S33 DVS28_RS24970 PF01743 Poly A polymerase head domain DVS28_RS24970 PF12627 Probable RNA and SrmB- binding site of polymerase A DVS28_RS24970 PF13735 tRNA nucleotidyltransferase domain 2 putative DVS28_RS24975 PF00437 Type II/IV secretion system protein DVS28_RS24980 PF00293 NUDIX domain DVS28_RS24985 PF03023 Lipid II flippase MurJ DVS28_RS24990 PF03793 PASTA domain DVS28_RS24990 PF00069 Protein kinase domain DVS28_RS24995 PF04542 Sigma-70 region 2 DVS28_RS24995 PF04545 Sigma-70, region 4 DVS28_RS25005 PF07992 Pyridine nucleotide-disulphide oxidoreductase DVS28_RS25010 PF00085 Thioredoxin DVS28_RS25015 PF07486 Cell Wall Hydrolase DVS28_RS25015 PF01471 Putative peptidoglycan binding domain DVS28_RS25025 PF00155 Aminotransferase class I and II DVS28_RS25030 PF01820 D-ala D-ala ligase N-terminus DVS28_RS25030 PF07478 D-ala D-ala ligase C-terminus DVS28_RS25035 PF17762 HTH domain found in ParB protein DVS28_RS25035 PF02195 ParB-like nuclease domain DVS28_RS25040 PF13614 AAA domain DVS28_RS25050 PF02527 rRNA small subunit methyltransferase G DVS28_RS25060 PF02096 60Kd inner membrane protein DVS28_RS25060 PF14849 YidC periplasmic domain DVS28_RS25065 PF01809 Putative membrane protein insertion efficiency factor DVS28_RS25070 PF00825 Ribonuclease P DVS28_RS25075 PF00468 Ribosomal protein L34 DVS28_RS25150 PF00075 RNase H DVS28_RS25200 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS25200 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS25200 PF00563 EAL domain DVS28_RS25205 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS25205 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS25205 PF00563 EAL domain DVS28_RS25210 PF00563 EAL domain DVS28_RS25210 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS25210 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS25305 PF00692 dUTPase DVS28_RS25315 PF00436 Single-strand binding protein family DVS28_RS25410 PF03747 ADP-ribosylglycohydrolase DVS28_RS25630 PF00145 C-5 cytosine-specific DNA methylase DVS28_RS25670 PF06480 FtsH Extracellular DVS28_RS25670 PF00004 ATPase family associated with various cellular activities (AAA) DVS28_RS25670 PF01434 Peptidase family M41 DVS28_RS25670 PF17862 AAA+ lid domain DVS28_RS25685 PF18395 Cas3 C-terminal domain DVS28_RS25685 PF18019 HD domain DVS28_RS25700 PF09344 CT1975-like protein DVS28_RS25720 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) DVS28_RS25730 PF13344 Haloacid dehalogenase-like hydrolase DVS28_RS25730 PF00293 NUDIX domain DVS28_RS25745 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS25745 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS25745 PF00563 EAL domain DVS28_RS25755 PF00004 ATPase family associated with various cellular activities (AAA) DVS28_RS25755 PF17866 AAA lid domain DVS28_RS25855 PF00145 C-5 cytosine-specific DNA methylase DVS28_RS25950 PF00216 Bacterial DNA-binding protein DVS28_RS25975 PF00176 SNF2 family N-terminal domain DVS28_RS25975 PF00271 Helicase conserved C-terminal domain DVS28_RS25975 PF00176 SNF2 family N-terminal domain DVS28_RS25975 PF00271 Helicase conserved C-terminal domain DVS28_RS26010 PF00692 dUTPase DVS28_RS26020 PF02511 Thymidylate synthase complementing protein DVS28_RS26065 PF02811 PHP domain DVS28_RS26065 PF07733 Bacterial DNA polymerase III alpha NTPase domain DVS28_RS26065 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DVS28_RS26065 PF14579 Helix-hairpin-helix motif DVS28_RS26160 PF01541 GIY-YIG catalytic domain DVS28_RS26160 PF02151 UvrB/uvrC motif DVS28_RS26160 PF08459 UvrC Helix-hairpin-helix N-terminal DVS28_RS26165 PF03747 ADP-ribosylglycohydrolase DVS28_RS26170 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS26170 PF01590 GAF domain DVS28_RS26170 PF00563 EAL domain DVS28_RS26170 PF00989 PAS fold DVS28_RS26310 PF00486 Transcriptional regulatory protein, C terminal DVS28_RS26310 PF00072 Response regulator receiver domain DVS28_RS26535 PF13662 Toprim domain DVS28_RS26535 PF08278 DNA primase DnaG DnaB-binding DVS28_RS26535 PF01807 CHC2 zinc finger DVS28_RS26535 PF08275 DNA primase catalytic core, N-terminal domain DVS28_RS26535 PF10410 DnaB-helicase binding domain of primase DVS28_RS26560 PF01068 ATP dependent DNA ligase domain DVS28_RS26625 PF02824 TGS domain DVS28_RS26625 PF04607 Region found in RelA / SpoT proteins DVS28_RS26625 PF13291 ACT domain DVS28_RS26665 PF02899 Phage integrase, N-terminal SAM-like domain DVS28_RS26665 PF00589 Phage integrase family DVS28_RS26725 PF03259 Roadblock/LC7 domain DVS28_RS26755 PF00436 Single-strand binding protein family DVS28_RS26770 PF13476 AAA domain DVS28_RS26775 PF12320 Type 5 capsule protein repressor C-terminal domain DVS28_RS26775 PF00149 Calcineurin-like phosphoesterase DVS28_RS26785 PF01743 Poly A polymerase head domain DVS28_RS26785 PF13735 tRNA nucleotidyltransferase domain 2 putative DVS28_RS26785 PF12627 Probable RNA and SrmB- binding site of polymerase A DVS28_RS26805 PF00795 Carbon-nitrogen hydrolase DVS28_RS26805 PF02540 NAD synthase DVS28_RS26820 PF00857 Isochorismatase family DVS28_RS26830 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DVS28_RS26830 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DVS28_RS26835 PF00533 BRCA1 C Terminus (BRCT) domain DVS28_RS26835 PF01653 NAD-dependent DNA ligase adenylation domain DVS28_RS26835 PF03120 NAD-dependent DNA ligase OB-fold domain DVS28_RS26835 PF12826 Helix-hairpin-helix motif DVS28_RS26860 PF05491 RuvB C-terminal winged helix domain DVS28_RS26860 PF05496 Holliday junction DNA helicase RuvB P-loop domain DVS28_RS26860 PF17864 RuvB AAA lid domain DVS28_RS26980 PF01743 Poly A polymerase head domain DVS28_RS26980 PF12627 Probable RNA and SrmB- binding site of polymerase A DVS28_RS26980 PF01966 HD domain DVS28_RS27110 PF00145 C-5 cytosine-specific DNA methylase DVS28_RS27135 PF04542 Sigma-70 region 2 DVS28_RS27135 PF04539 Sigma-70 region 3 DVS28_RS27135 PF04545 Sigma-70, region 4 DVS28_RS27150 PF00216 Bacterial DNA-binding protein DVS28_RS27155 PF04545 Sigma-70, region 4 DVS28_RS27155 PF04539 Sigma-70 region 3 DVS28_RS27155 PF04542 Sigma-70 region 2 DVS28_RS27155 PF00140 Sigma-70 factor, region 1.2 DVS28_RS27160 PF04851 Type III restriction enzyme, res subunit DVS28_RS27205 PF00114 Pilin (bacterial filament) DVS28_RS27205 PF07963 Prokaryotic N-terminal methylation motif DVS28_RS27275 PF07963 Prokaryotic N-terminal methylation motif DVS28_RS27275 PF00114 Pilin (bacterial filament) DVS28_RS27290 PF07963 Prokaryotic N-terminal methylation motif DVS28_RS27325 PF00437 Type II/IV secretion system protein DVS28_RS27335 PF00482 Type II secretion system (T2SS), protein F DVS28_RS27340 PF00437 Type II/IV secretion system protein DVS28_RS27390 PF01367 5'-3' exonuclease, C-terminal SAM fold DVS28_RS27390 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DVS28_RS27390 PF00476 DNA polymerase family A DVS28_RS27395 PF00563 EAL domain DVS28_RS27395 PF00990 Diguanylate cyclase, GGDEF domain DVS28_RS27395 PF03707 Bacterial signalling protein N terminal repeat DVS28_RS27450 PF01330 RuvA N terminal domain DVS28_RS27450 PF07499 RuvA, C-terminal domain DVS28_RS27465 PF00145 C-5 cytosine-specific DNA methylase DVS28_RS27475 PF01555 DNA methylase DVS28_RS27485 PF13307 Helicase C-terminal domain DVS28_RS27495 PF01555 DNA methylase DVS28_RS27530 PF00497 Bacterial extracellular solute-binding proteins, family 3 DVS28_RS27540 PF03330 Lytic transglycolase DVS28_RS27590 PF07726 ATPase family associated with various cellular activities (AAA) DVS28_RS27590 PF17863 AAA lid domain DVS28_RS27640 PF00145 C-5 cytosine-specific DNA methylase DVS28_RS27660 PF02867 Ribonucleotide reductase, barrel domain DVS28_RS27660 PF08471 Class II vitamin B12-dependent ribonucleotide reductase DVS28_RS27680 PF04307 LexA-binding, inner membrane-associated putative hydrolase DVS28_RS27695 PF01609 Transposase DDE domain DVS28_RS27695 PF13613 Helix-turn-helix of DDE superfamily endonuclease DVS28_RS27735 PF02195 ParB-like nuclease domain DVS28_RS27735 PF17762 HTH domain found in ParB protein DVS28_RS27785 PF00684 DnaJ central domain DVS28_RS27785 PF01556 DnaJ C terminal domain DVS28_RS27785 PF00226 DnaJ domain DVS28_RS27800 PF13638 PIN domain DVS28_RS27800 PF02562 PhoH-like protein DVS28_RS27840 PF03796 DnaB-like helicase C terminal domain DVS28_RS27870 PF00772 DnaB-like helicase N terminal domain DVS28_RS27870 PF03796 DnaB-like helicase C terminal domain DVS28_RS27870 PF14528 LAGLIDADG-like domain DVS28_RS27890 PF13614 AAA domain