MTP40_RS00015 NONE
MTP40_RS00020    4196 ..    4207 +  -4.4  -3.06796   GAAATGGAGAAATGT                TGCA TCGC TGCA                 TTGCATAGAATGCGG  47 39
MTP40_RS00025 NONE
        gyrB NONE
        gyrA    9383 ..    9417 + -14.3  -5.26119   ATTTGTAAAAAATGA    CCCGAGACCGGACGTG CACG CGCG-CCGATCTCGGG     TTTTGTTTTTGCCGC 100 259
MTP40_RS00040   10071 ..   10101 + -20.5  -4.64676   AAGGGGCAAACAAAA       CCGGCACAGCGTC AGGCA GGCGCTGTGCCGG       TTTTGTTCCCCGTGG 100 43
        nifJ   16522 ..   16556 + -13.7  -4.96848   AAACGAATCCGTTTT    TAGCGCCCCGCTCACT TTAC AGTGAACGGGGCG-TA     TTTTTGTGTAAGGAA 100 391
        mgtE   19465 ..   19516 +   -29  -5.06816   ACGTTTGATTTTATA GGAGCAGCCCTCTCAGTCAAAGCC TGAC GGCTTTGCCTGAGAGGGCTGTTTC TTTTTGTTGAAAACT 100 40
MTP40_RS00085 NONE
MTP40_RS00090   21787 ..   21806 +  -9.2  -4.15222   TGCCCAAAACAAAAA            GCTCCCCC TTTC GGGGGAAC             TTTGTTGGAAAGAGT  80 164
MTP40_RS00100   23926 ..   23970 + -20.9  -4.03234   AGCAATACCCCAAAA CAAGAGTCCCCTCCGGTGT ACCGCAA GCGCCGGAGGGGACTTTTG TTTGTCTGAAACAGC 100 188
MTP40_RS00135   33163 ..   33190 + -16.4   -5.2189   GAAAACTTCCCCAAA        GCACCCTTCACA GCTA TGTGAGGGGTGC         TTTTTTGATACTTGC 100 41
MTP40_RS00140   34109 ..   34136 + -16.4  -4.89852   GAAAACTTCCCCAAA        GCACCCTTCACA GCCA TGTGAGGGGTGC         TTTTTGTCAATCTGC 100 41
MTP40_RS00145   34933 ..   34965 + -17.7  -5.04385   TCAAAATTCATACAA      GCCCCGGAGCGCC TACCCCT GGCCCTCCGGGGC      TTTTTTGGGCCTATG 100 49
MTP40_RS00150   36211 ..   36252 +    -5  -5.06585   GAAACTGTAAAATGC AGCCCTCTCATTCAAAGC CTGACA GCTTTGCCCGGGAGGGCC  TTTTTCTCTGATTTG  80 31
        galE   37510 ..   37541 +  -8.8  -5.07652   GAACTGTTCTCAAAA      CGCACCTTTGAA CGTGAAAA TTCAGGGGTGCG       TTTTCTTTTGCCCGG  93 44
        feoB   40074 ..   40105 + -17.4  -4.74103   TGAAGCATATCAAAA      GCCCGTACCGTGAA AATC TTCATGGTGCGGGC       TTTTTGCGTTGGACA 100 49
MTP40_RS00165 NONE
MTP40_RS00170   41470 ..   41504 + -10.8  -5.25772   AACTGCAAAAGAAAA     GGGCCTGTCTCC CGAAATTCCTT GGAGACAGGCTC     TTTTTGTTGTACTTT 100 40
       sdaAB NONE
       sdaAA NONE
MTP40_RS00190   44782 ..   44807 + -12.7  -5.98675   ATCGCACCAGAAAAT         GCCGTGAAATC GAAA GATTTCATGGC          TTTTTTGTTTTTCTG 100 32
MTP40_RS00225 NONE
MTP40_RS00230 NONE
MTP40_RS00235 NONE
MTP40_RS00240   56815 ..   56872 + -15.9  -3.87869   GTGAATTATAAGCCA GAACAACAGATGCCCACCAGCTTATGG CGAAAA CCATAGGTCGGTGGGCATC-GT-GTTC TTTATAAGGGCTTAA 100 30
MTP40_RS00275   63930 ..   63957 +  -2.6  -4.11216   TTCTGCCGCAGAACA        GGTGCTTGCCGGA GCC TCTCGCA-GCCCC        TTTTCCGCGTCAGCC  56 246
MTP40_RS00305   68651 ..   68687 + -19.6   -5.1523   AAAAAAAAATAAAAA    GAGAGCGTCCCTGAAG CAGAA TTTCAGGGGCGCTCTC    TTTTTGTATTATAGA 100 88
MTP40_RS00310   70386 ..   70401 +  -8.2  -3.31144   GCCGCGTCGGGATTT              GGGCGG TGGG CTGCCC               TTGTGCAGATCCACC  66 48
MTP40_RS00315   71279 ..   71303 +  -2.7  -2.87132   GAACCTATTCGGGGC          AGAAGCCCG TAGAAAT CGGGCTGCC          TGTATGGAAGAGAAA  42 39
MTP40_RS00320 NONE
MTP40_RS00325 NONE
MTP40_RS00330   74552 ..   74566 +    -5  -2.54192   CAAAAATAAGGAGGA               GACTAT CCT ATGGTC               ATTGATACTCATATC  46 32
MTP40_RS00335 NONE
MTP40_RS00340 NONE
MTP40_RS00345 NONE
MTP40_RS00350   77499 ..   77529 +  -3.8  -4.38712   GAAAGGATATAAACG       CGCGCTGCGCGATT AGC ATTTTTGCCGCGCG       TTTTCTAAGGCTCAA  65 29
MTP40_RS00360   79531 ..   79565 + -13.6  -4.56629   TAAGGCATAAAATGA    CCCCGGAGCGTTTGC TGTGAT GCAT-CGCTCCGGGG     TTTTGTGATGTTATG 100 100
MTP40_RS00375   82336 ..   82381 +   -19  -2.78935   CTCTGTTCAGAATTT TTGCAAACGCCGCCGGGTGG GGAATG CCGCCGGGCGGCGTTTGCCG TATCATAGAACCTCT 100 57
MTP40_RS00380 NONE
MTP40_RS00385 NONE
MTP40_RS00390   85586 ..   85613 + -10.5  -4.75404   TAGCTTGAACCAGGA        GCTGCCGGACA TTTCTC TGCCCGGCGGC         TTTTTGCTACACTTT 100 53
MTP40_RS00395   86667 ..   86685 +  -2.2  -3.05715   CTGCAGGAGAAGAAC             GAGGCCTG AAC CGGCCCGC             TTCCCTGCCCACCTT  42 17
MTP40_RS00400 NONE
MTP40_RS00405   89889 ..   89922 + -14.5  -4.30719   CACTTCCTCCTTTCA     GACCCGCTGTGTGGC GTAT GCTGCCCGGCGGGTC      TTTGTTGTGCACAAA 100 72
MTP40_RS00410 NONE
MTP40_RS00415   91686 ..   91701 +  -8.2  -5.10029   TCAGGCATAAAGAAA              GCGTCC TTCG GGGCGC               TTTTTTGCAGTTCAT  93 31
MTP40_RS00420   93279 ..   93324 +   -16  -4.81752   AACCGGCATAGTTGC CGGCGGCACCGCCGCAGGAG CGTTTT CCCCTGCGGCGGCTTTGCCG TTTTTAGCTGTTTTT 100 118
        argH NONE
        argC   95888 ..   95906 + -14.6  -3.06515   CGGTGTTCGCATCCA             CCTCCCTC AAA GAGGGAGG             CTTTTGCAGCTGACG  91 61
        argJ   97268 ..   97286 + -11.6  -3.53012   TCGCCTGCGGCGACA             GCCCCCCC GAA GGGGGAGC             TTTAGGAACGAACGA  83 55
        argB NONE
MTP40_RS00445 NONE
        argF  100509 ..  100559 + -22.1  -4.04474   GCCGGTCTGTAAAAA CGAGAAAGAACCCCGGAGCTGCAG GAAA CTGCAGCTCCGGGGTTCTTA-TGG TTTCTCTCAGGGTCT 100 29
MTP40_RS00465  106389 ..  106420 + -15.9   -3.9712   ATCGTAACCGGAAAT      GTCCTGCGGCGGG CCATCC TCTGCCGCAGGAC       TTTCTGATACCCTGA 100 95
MTP40_RS00470  107040 ..  107083 + -31.2  -3.53761   TCATTTACCTCCTAG CGCCAGAAAGGGCCTGCGGC ATTT GCCGTGGGCCCTTTCTGGCG TTTGCAGGCCCGTTC 100 58
MTP40_RS00475  108933 ..  108965 +   -20  -3.08032   TGTAAAATCAAATAG      GAAAACCGCTCGCC CTTGC GGCGGGCGGTTTTC      TGCTTTTGGAACAAA 100 69
MTP40_RS00480 NONE
MTP40_RS00485  109605 ..  109641 + -20.3  -3.53563   CATGATCTCCCATAA    CCGAAAGGGCCCTGC AAATGCC GCAGGGCCCTTTTGG    TTTGCAAGAGAGTGT 100 82
MTP40_RS00490 NONE
MTP40_RS00495  110413 ..  110448 + -20.5  -3.45404   TGCCGCATACAAAAA    CCGCCCCGGCGGCTGC TTTGT GCAGT-GCCGGGGCGG    TTCGTTCGCTTTTGG 100 55
MTP40_RS00505  113200 ..  113221 + -13.7  -5.00616   TCTCCGCCAACAAAA           GGCACCGGC TCAG GCTGGTGCC            TTTTTTGCGGCAAAG 100 32
MTP40_RS00515  114987 ..  115017 + -17.6   -5.7946   GCACGCCGCTGCCTC       GCCCCGGAGGGT CCCGCAA GCCCTCCGGGGC       TTTTTTTGTTGGCCG 100 175
MTP40_RS00530  117693 ..  117705 +  -4.7  -3.99324   GCTCGTGCACGCCGC                CGCCC ACA GGGCC                TTTCTCGTCGTGCAG  62 110
MTP40_RS00540 NONE
MTP40_RS00545  118942 ..  118959 + -12.7  -4.84017   TGTAACTCCAGTGCG             GCTCCCC TGCG GGGGAGC              TTTTTGTGACGCATT 100 54
MTP40_RS00550  121141 ..  121174 + -13.7  -4.18494   GTGACCGTGCTTTCT     GCCCCCGCCTGAGTG CTGA TGCCCCGGCGGGGGC      TTTTCGCTGCCGGTG 100 37
MTP40_RS00555  123098 ..  123137 + -13.6  -4.57581   CATCGGAGCATAACC  ACAAAAAAGGGAGACCCC GCAG GGGGTCTCCCGATTTTGG   TTTATTCTTTCCGGT 100 28
MTP40_RS00565  124912 ..  124933 + -15.1  -3.93695   TCATACAAAAAGAAA           GCGGCCTGC TTCT GCGGGCCGC            TTTCTGCATGGTGCA 100 46
MTP40_RS00575 NONE
MTP40_RS00580  128522 ..  128551 + -19.5  -2.99471   CGAAAATAAAGTAAA       CAAAAAGGACGGC ATGC GCCGTCCTTTTTG        TATATGTGGAAATAA 100 27
MTP40_RS00595  132267 ..  132317 + -19.9  -4.63218   CCATTCCCAAACTGT AAAAATGCCGCTGAGGGCG-GGCG TTTA CGCCCCGCTTTCGGCGGCATTTTG TTTTGTTCACAAACC 100 89
        nagB  133139 ..  133167 + -23.3  -3.54459   TGCTGTAAGACAAAA        CCTCTCCGTCTGC GAA GCAGACGGAGAGG        TTTAGGAGGCATTAA 100 33
        nagA NONE
MTP40_RS00610 NONE
MTP40_RS00615  135531 ..  135556 + -16.1  -5.00616   GATATCCCCCAAAAA         GCCCGAGGTGC ACCC GCACCCCGGGC          TTTTTTGCGCCCAAA 100 39
MTP40_RS00620 NONE
        pstC NONE
        pstA NONE
        pstB NONE
        phoU  140140 ..  140162 +    -9  -4.17657   ATCCCCCTGTCCCCG           CCCGCCGCTG CCG CAACGGAGGG           TTTTACGCTATGGTA  80 157
MTP40_RS00645  140563 ..  140605 +  -8.9  -4.79373   AAGCGCATCAGTGAA CGACCCTCTCCGCCTTTGC AGCAG GCTTTGACGGAGAGGGCCG TTTTGTGTTATATTA 100 39
MTP40_RS00650  141193 ..  141228 + -10.2  -5.05079   GATTGAACCGCAAAA    ATGCGCCGCCCCACCG GAAA CGATGGAGCGGCGCTG     TTTTTATGTGGTTCT 100 35
MTP40_RS00670 NONE
MTP40_RS00675  146744 ..  146778 + -13.6  -4.90455   CGACTAAAACAGGAA     CAGACCGCATCCCG AAACACA CGGGGTGCGGTCTC     TTTTTGTGAATCTGT 100 34
        sstT  148248 ..  148274 + -14.4  -5.27938   AAATGGCTTTTCAAA         GGCTGCTGTGCT GCT GGCACGGCGGCC         TTTTTGTTTGGAACT 100 51
MTP40_RS00685  148974 ..  149014 + -14.2  -5.21709   AATATGAACTGAAAA GCCCGGAACC--ACCTGC CGCCATA GCAGGTACGGTTCCGGGC TTTTTTGCTGTGCGG 100 103
MTP40_RS00700 NONE
MTP40_RS00705  153375 ..  153398 + -19.6  -4.67011   AGAAAGTCAATAAAA          GCCGGTCGGC GTAT GCCGACCGGC           TTTTTGCGTGCAATT 100 44
MTP40_RS00710  154760 ..  154782 + -10.5  -5.22943   TAAACACAGCAAAAA           GTCCCGACC AGAAC GGCCGGGAC           TTTTTTGCGTTTAAT 100 46
MTP40_RS00750 NONE
MTP40_RS00755 NONE
MTP40_RS00760  164475 ..  164509 + -19.4  -3.76383   GGAAGATCTGAAACG     CTGAAGAGGTGCTGCC ACG GGCGGCACCTCTTCAA     TTCTATTCGCTTTTT 100 22
MTP40_RS00765 NONE
        aroB NONE
        aroC  167875 ..  167885 +  -2.4  -2.64735   GGACCCCACCGGCTA                 CCGC AAG GAGG                 TGCTGTAAATGGAAT  39 7
MTP40_RS00780 NONE
MTP40_RS00785 NONE
        aroF NONE
        aroA NONE
MTP40_RS00800  172879 ..  172889 +  -6.8  -5.28176   AACCTTTTCAGCACA                 CAGC ACT GCTG                 TTTTTTCTGGCTCCC  91 39
MTP40_RS00805  173939 ..  173956 + -11.3  -5.18561   ATCAATAACAAAAAA             GGACTGC GAAA GCAGTCC              TTTTTTGCGTGTTTA 100 33
        pulA  178522 ..  178552 +  -9.7  -5.09521   ACCTGCAATTGAAAA       TCCCCTGACTAGT TCAAC GCCGGTCAGGGGA       TTTTTGATTTATTGA 100 459
MTP40_RS00825  181372 ..  181400 +  -5.1  -2.64155   TGCTGCAGATCTGCA        GGGCCTGTACCTG GAG CAGCAACCGGCTC        TCCCTTTGGGAGAGC  48 179
MTP40_RS00830  183136 ..  183174 + -14.7  -5.24129   TCTGATTGGAAAAAA  GAGAGCTGCTGTGCGGAG CTGA CTC-GCACCGCAGTTCTC   TTTTTTATAAAAAAG 100 36
MTP40_RS00835  184281 ..  184327 + -25.6  -4.02022   CAGAACAAAAGCAGA TAACCAAAAAGGGACGATGC CGCAAAA GCATCGTCCCTTTTTGGTTA TTTGTGCTCCTTCAG 100 51
MTP40_RS00855 NONE
MTP40_RS00860  187676 ..  187716 + -11.3  -5.61881   AAATTTGAAAAAGCA CCCGCTTCA-GTTTCCTG GATTTG CAGGAAAAATGAGGCGGG  TTTTTCTTTTTGCCC 100 59
        glgB NONE
MTP40_RS00870 NONE
        glgD  192610 ..  192650 + -23.5  -2.89323   CCCGGTAGCCCCTCT CAAAGAG-GGGCGGGGGC CTTTGC GCCCCCGCCCGCTCTTTG  TGTATCCGCCCTTTT 100 80
MTP40_RS00880  194129 ..  194156 + -20.6  -5.03145   AAAAGTCTGCCTTTT        GCCGCCCGGTTC GCAG GAGCCGGGCGGC         TTTTTTGCGGACTTC 100 50
MTP40_RS00885  196305 ..  196332 + -16.3  -4.87318   ACTTCCAGGATAACG        CCGCCCGGCTC TCAAAT GAGCTGGGCGG         TTTTTGCGTTTTGCA 100 48
MTP40_RS00890  196865 ..  196875 +  -2.4  -3.87815   TCAGTAAACATCACA                 GGAG GTT CCCC                 TTTATGAAACTACAG  52 34
MTP40_RS00895 NONE
MTP40_RS00900  198161 ..  198175 +  -2.9  -2.62656   CCAAAACAAAAACTT               TTTTG GAGGA CAAAA               CTTATGACTGACTTT  41 60
        atpE NONE
        atpF NONE
        atpH NONE
        atpA NONE
        atpG NONE
        atpD NONE
        atpC  203892 ..  203906 +    -7  -3.13164   CTGCAAACAGGGACC               CCCCTG AAA CCGGGG               TTACGTGCTTGCGGG  60 122
MTP40_RS00940  205306 ..  205348 + -15.5  -3.15699   AAACAGAATAAAACA GAAAGCGCCCCCGGAAGGC AGATC GCTCTCCGGGGGCGCTGTG TATTGATAGATCAGT 100 30
MTP40_RS00950  208455 ..  208474 +    -5  -3.68351   AAGAGGAAATACAAG            CCATTCTC GAAA GAGAATAG             TTTGAATGGTCAAGC  57 273
MTP40_RS00955  211420 ..  211437 +  -2.1  -3.18383   GTAAAACAGAAATGT             TAT-ACTG AAC CAGTCATA             TTGGTCGGTGACGAT  43 129
         rrf  211567 ..  211590 + -13.2  -5.68438   CCGACTTGAACAGAA          CGCTTCAGGA TTTT TCCTGAGGCG           TTTTTTGTTTCGTAA 100 35
MTP40_RS00970  212770 ..  212798 +  -8.8  -5.24129   TACATAAGGCTTCCT        TCCGCTGTCCCT GCAAA AGAGGCGGCGGA        TTTTTTCTGCAAAAG  95 34
MTP40_RS00975 NONE
MTP40_RS00980  217288 ..  217344 +  -4.2  -3.53811   GCCACCTCTCCCAAA GGGAGAGGCACTGGCAATTCCCCCGCA AGGT TTCGGGA-AACCGCCAGAGGCTCCCCC TTTGGGGGAGCTGGC  52 77
MTP40_RS00985 NONE
MTP40_RS00990 NONE
MTP40_RS00995 NONE
MTP40_RS01000 NONE
MTP40_RS01005  220814 ..  220840 + -12.4  -4.88407   ATGACCAACAAAAAA         GAGGAACTGC CGGGAAA GCAGTTCCTC         TTTTTGATTGGGTAA 100 37
MTP40_RS01015 NONE
MTP40_RS01020  222877 ..  222917 +  -9.9  -5.16237   CCTGAGAACGTGAAA AAAAGTGGGAACTGC-GT GAAAAG ACGGCGGTTCCCACTTTC  TTTTTTCGTCGAATT 100 36
        fabG NONE
MTP40_RS01030  225508 ..  225539 + -24.5  -4.33274   TACCGCTATGAGAAA      GAGCCCCCGCCGG TCTATT CCGGCGGGGGCTC       TTTTGGTGGTGTACA 100 50
MTP40_RS01040  227759 ..  227771 +  -3.3  -3.09193   CTGCCCCTGGATGCC                GAGGG GTA CCCTG                TTGAATGAATCTGGT  45 5
MTP40_RS01045  228254 ..  228279 + -12.5  -4.60041   AATCTGCGGACAAAA         GCCCTTGCGGG AGAC CCTGCGGGGGC          TTTTTCGCACTAAAT 100 47
        ptsP  229988 ..  230043 + -19.2  -5.26875   ACGGAACCGTAAAAG GGGCTGCTGCGGCGCTCTCTGCCAAC CAAAGT GTTGGCAAAG-GCGC-GCGGCAGCTC TTTTTTGATTGCAAC 100 50
MTP40_RS01055 NONE
MTP40_RS01060 NONE
MTP40_RS01065  233898 ..  233928 + -18.3  -4.61231   AAGCGCTGCATCACG      GCCCCTGCC-CCGG AACC CCGGCGGCGGGGGC       TTTTTGCGCCTATAC 100 39
MTP40_RS01070  236168 ..  236198 +  -6.6  -2.62184   CTGTTGTACTTCACA       GCCGCTGCCTGCCC GAT GGACAGGCCCCGGA       TGGTGTCGGCGGCAC  48 426
        ppdK  245574 ..  245611 + -20.7  -4.67038   TAAACGTATGATAAA   CCCTCCCCGGTGAAACT GAAT GGTTTTGCCGGGGAGGG    TTTTGGTTTTAGAAA 100 85
MTP40_RS01100  246783 ..  246821 + -15.5  -5.19879   TTCTAAATAACAAAA   TCCACGGAGAAAGGAAA TGATT TTACTTTTCTCCGTGGA   TTTTTCTGTTTGGAA 100 35
MTP40_RS01105 NONE
MTP40_RS01110 NONE
MTP40_RS01115  249542 ..  249579 + -22.3  -4.65895   TTCCTAAACCGCAGC   GAAAGGCTCTGATGGAG GATT TTCCATCAGAGCCTTTC    TTTTTGCCTGAAAAA 100 34
MTP40_RS01120  251611 ..  251646 +  -5.5  -4.72007   ATTATCTTATTGAAA    AGACCTGAGGAAAAGT TTCGC ACTG-TCCTCAGGTCA    TTTATTTTACTGAAA  75 279
MTP40_RS01125 NONE
MTP40_RS01130 NONE
MTP40_RS01135  254041 ..  254068 + -14.2  -5.14965   AAATTTGTGGTTTAT        GGCGGCAGGAAG TGAT TTTCCTGCCGTC         TTTTTTCATGGAGGT 100 39
MTP40_RS01140 NONE
MTP40_RS01145 NONE
MTP40_RS01150  255729 ..  255744 +  -7.6  -3.53012   AATCGCCCGATTAAA              GATGAC GTTC GTCATC               TTTGAGACGACGAGG  66 229
MTP40_RS01155  256492 ..  256527 + -19.2  -5.19261   TGCCTGCCAAGGAAA    GAACATGACGGATCCT GAAA AGGAACCGTCATGTTC     TTTTTTGATGAATTT 100 41
MTP40_RS01190 NONE
MTP40_RS01195 NONE
MTP40_RS01200 NONE
MTP40_RS01205 NONE
MTP40_RS01210  268558 ..  268591 + -18.2  -5.00895   AATAATGCAAGTGAA     CCGCCCCGGTTTCC GTAACA GGAGATCGGGGCGG      TTTTTATATCATGGA 100 240
MTP40_RS01215 NONE
MTP40_RS01220  269593 ..  269623 + -14.8  -4.77216   GTAAAGAAGATAAAA       GCTCTTGGCTTCTG TAA TGGAGGCCAAGAGC       TTTTTGCATCTTGTT 100 131
MTP40_RS01225 NONE
MTP40_RS01230 NONE
MTP40_RS01235 NONE
MTP40_RS01240  276500 ..  276534 + -12.9  -4.29472   ATTAAGCGACCCCAA     CGGTCTGAATCCTGT ATTGC ACAGGGCTCAGGCCG     TTTAGTTTTAATTTG 100 242
MTP40_RS01255  279437 ..  279470 + -20.4   -5.0538   AAATAAAGTATATGA     CCGCCCCGGTTTCT GTGATA GGAAACCGGGGCGG      TTTTTTGCGCTCACG 100 302
MTP40_RS01260  281265 ..  281298 + -21.8  -4.61868   CCCATAAAACCGCAG     CGCCCCCGGTTTCC ATGACA GGAAGCCGGGGGCG      TTTTGTGTATGACTG 100 65
        cas3 NONE
        casA NONE
        casB NONE
       cas7e NONE
       cas5e NONE
       cas6e  289716 ..  289728 +  -3.3  -4.07568   GGACTTCGAGTGGCA                GGAAC TCG GTGCC                TTTTCCCCGCCCACG  58 389
MTP40_RS01295  291119 ..  291133 +  -2.8  -4.02581   GGCGGCGCGGCTCTT               TGTGCA GGA TGCAGA               TTGTATTTTCTGCGC  56 58
MTP40_RS01300  291738 ..  291766 + -17.5  -4.56597   AAATAAGTAAGCAGA        TCCCCCGGAGGCA GAG TGCTTTCGGGGGA        TTTTTGCGGAGAAAA 100 35
MTP40_RS01305  293275 ..  293311 + -14.6   -5.1101   CAGGCGCAGCAAAAA   CTCCCATGCACAGCATC TTCC GATG-TGAGCATGGGAG    TTTTTTGCGTGGTAG 100 54
MTP40_RS01310 NONE
MTP40_RS01315  295411 ..  295455 +   -21  -4.55295   AGCGGAACAATAAAA GAGCAGTGCT-TCCGGTGGGT GGAA ACCCATTGGAGAGCACTGCTC TTTCTTTGTGGGAAA 100 248
        thiW  300818 ..  300833 +  -4.7  -3.34517   CAGAGCAGCCTTTCC              TGACG GGGGTG CGTCA               TGTTTGCAGAGCAGT  52 23
        thiM NONE
        thiE  302384 ..  302394 +  -8.2  -3.04144   TCCGGTACGTTCAGC                 GCGC AAA GCGC                 TGTTCAAGATAAAAG  63 136
        thiC  303764 ..  303790 + -10.8  -5.32944   TTTTCTTCCTTCTCA         GCCGTCCGGT TTTGCTC GCCGGGCGGC         TTTTTTGCTTGTCCC 100 48
MTP40_RS01360 NONE
MTP40_RS01365 NONE
MTP40_RS01370  306796 ..  306835 + -10.9  -5.42198   GCGATTTTGAAAACC  GCCTTCGAAGTGATATG CGATAT CATATTGCTTTGAGGGC   TTTTGTTTTTTCAGG 100 319
        cysS  308410 ..  308452 + -15.1  -4.68593   TACAATGCGGTAAAA TGAGGGTGCG-GGAACAC TGTGCTGT GTGTTCCACGCACCCTTA TTTTTGCATGATACA 100 68
MTP40_RS01380  309454 ..  309507 + -17.8  -3.16421   CGTGATCCGATAACT GAATCAGC-AAAAAACCTCCCTGCC ACGCC GGCAGGGAGGTTTTTTTGTTTGTTC TTACATCCTTATTGG 100 28
        rsmD NONE
MTP40_RS01425  317336 ..  317369 + -15.4  -5.54894   CGGTGAGAGCTTCCG     GCCCCTGCAAGC AAAAACGACG GCTTGCAGGGGC      TTTTTTTGGTACATT 100 61
        rsmH NONE
MTP40_RS01435  319086 ..  319103 + -12.7  -4.91084   ACCAAACAACGAAAA             GCGTGCG GCAG CGCACGC              TTTTTCGGTTTTCTT 100 41
MTP40_RS01440 NONE
MTP40_RS01445 NONE
MTP40_RS01450 NONE
MTP40_RS01455 NONE
        murG NONE
MTP40_RS01465 NONE
MTP40_RS01470  329737 ..  329762 + -16.9  -5.34309   AATAAACAACAAAAA         CGCGCTGTGTC GTTT GACACGGCGCG          TTTTTCTTTGCTGCT 100 36
        glmM NONE
MTP40_RS01495  334969 ..  334985 +  -2.2  -2.71712   GCGTCGTTCTGGTGC              TGCTGG CAAGC CTGGCA              CTTTGAGAGGAGCGG  39 3
MTP40_RS01500  335298 ..  335354 + -13.4   -3.6543   GAGAAAGTAAGACAA TAAATAGAGAGCT-CTCTTGCATCG CAGCAAAA TGATGCAGGGGGAGCTCTCTGTTTA TGTTTTGGGAAATTC  93 39
MTP40_RS01510 NONE
MTP40_RS01515  337498 ..  337554 + -16.6   -3.9093   AGAAGGGCAAGAATA ATGCAACAGCCCCCACGGTATGCAGC TTTTT GCTGTATCTGGTGGGGGCTGTTGCTG TTATTCTATGATAGA 100 48
        rplM NONE
        rpsI  343122 ..  343143 + -15.9   -5.4833   TCAGATGTATCTTTA           CGGCTCTGC TTCG GCAGAGCCG            TTTTTTGTTGCCTGC 100 47
MTP40_RS01615 NONE
MTP40_RS01620  357141 ..  357173 + -15.6  -2.66316   TCCTGCGCACAAAAA     GAACACCCCCGCGCC TTTG GGC-CGGGGGCGTTC      TGCTGTGATAGGGAA  95 85
MTP40_RS01655  365054 ..  365064 +  -5.4  -3.29144   GCAGGCTGCCGGGGG                 TCAG ATC CTGA                 TTGTAGAACCGGTAG  51 254
        rpsT  367467 ..  367494 + -14.2  -5.61881   GACTGACGAACAAAA        CCTCTGTATCGG GAAC CCGATACGGGGG         TTTTTGTTTTTCCAG 100 62
MTP40_RS01695 NONE
MTP40_RS01700  371573 ..  371609 +  -3.7  -5.40072   AAAGGGAGAGCTGAC   GAGC-GCAGCGAGTGT GAGAGG GCATTTGCAGCAGCTC    TTTTTTTAAAAGGAG  81 104
MTP40_RS01705 NONE
MTP40_RS01710  374263 ..  374276 +  -5.3  -5.14965   TGCAGTGCTTTTCAC               CAAAC TTTC GTTTG                TTTTTTCATGCGACT  82 53
MTP40_RS01715  374774 ..  374793 +  -3.5  -2.70574   TGCTGATCCTGTAAG            CCGGGAT AGTGGG ATACCGG             GTCTGTTTTCTGTAA  42 27
MTP40_RS01720  375251 ..  375285 + -18.5   -5.4505   CAAAGAACAACACAG     GGCGGCGGCTCTCCC CAAGC GGGCGGGCCGTCGCC     TTTTTTGTTCACAGA 100 70
        trxA  375753 ..  375784 + -16.6  -4.65895   AGAATCGAGCTGCAT      GGCCGCTGCCTGTT TTCG AATGGGCGGCGGCC       TTTTTGCATCCCCGG 100 48
        hisG NONE
        hisD  378893 ..  378911 + -14.6   -2.7806   TGCTTTGCAATGCCA             CCTCTCCC AAA GGGAGAGG             CTTTGGCAATTTCCC  90 64
        hisC NONE
        hisB NONE
        hisH  381297 ..  381313 +  -2.2  -4.07568   ACTGGCTCGCCCTCT              CAGTCA AAGCC TGACGG              TTTTGCGAAGCAAAG  55 41
        hisA NONE
        hisF NONE
       hisIE NONE
MTP40_RS01770  384402 ..  384442 + -16.9  -4.19258   AAGAAAAATAAAGCA  CAACCCTCTCCGTTTTTGC TGT GCAATGCCGGGGAGGGTTG  TTTTCCGTAAACTGT 100 41
MTP40_RS01775  385845 ..  385871 +   -18  -4.12532   GCAGAATAAGGAAAA         GACCCGGCTGCC GAT GACAGCCGGGTC         TTTGTGTCTGCGGGA 100 32
MTP40_RS01800  389975 ..  390007 +  -2.7  -3.99275   GAAGAACAGGTAAAA     TTCCGGGCAAATCT CTTGAC AGAAA-GCCCGGAA      TTTACTATTGTATAA  56 90
MTP40_RS01805  390675 ..  390718 + -17.7   -2.5806   TAAATAGCATAGCGT AAAAAGAGACGGTTCTGCA TCGGAT TGCAGGACCGTCTCTTTTG CTTATAACAGGCTTT 100 38
MTP40_RS01820  393419 ..  393460 + -16.1  -2.53422   TTCCCTCGAGCGCAC CAAAATCCCACGAAGAATC GTAA GATTCCTCGTGGGATTTTC  CATTTTCTGGGGCTC 100 24
MTP40_RS01890 NONE
MTP40_RS01895  407921 ..  407942 + -13.7  -2.61106   AAGTCTAGTGTGTTA           CACCTCGCC GCCG GGCGGGGTG            TACGTTCTCGGTGTG  84 72
MTP40_RS01940  413026 ..  413037 +  -3.6  -3.49951   AGAACGACTAAAGCC                GTCC ATCG GGGC                 TTATGTGCCGCTGTG  50 30
MTP40_RS01945 NONE
MTP40_RS01950  415234 ..  415279 + -14.8   -4.1523   ACGCATAAAAACAGA GCAGCCCACAGGGGGCGG-GGA TGAT TCCGCCGGGC-CTGTGGGCTGC TTTCTCTATGATGGG 100 33
MTP40_RS02020  431277 ..  431301 + -11.5  -5.41941   AAGTTTCCCCTTTGA          GCGTTCTGC CGAAAAA GCAGAACGC          TTTTTGTTTGCTTTC 100 48
MTP40_RS02025  432440 ..  432465 + -12.6  -4.93696   ATAACGCGCTTTTTG         TGCCTGCTCC TTTCCC GGAGCGGGCA          TTTTTGCTCTTTGCA 100 37
MTP40_RS02030  434004 ..  434034 +   -19  -4.84359   TTCCGGTTTTTCCCG       GCGGGCACGCAGCA GAA TGCGGTGTGCCCGC       TTTTTATCGCAATAC 100 42
MTP40_RS02035  435604 ..  435631 +  -8.2  -2.78463   CGGCACGCCGGGCAG        AGACCGCAGCGC AGCT GCGCCGCGGGCG         TATCCTCCGCACAGT  62 59
MTP40_RS02040  436511 ..  436540 + -11.5  -5.64274   TCACCATAAAAGCAA       TCCCCACAGTC CTTTTTGT GGCTGTGGGGA        TTTTTTTCTCAATGG 100 61
MTP40_RS02045  438996 ..  439008 +  -3.4  -3.21924   TCTTCCGAGAAATCT                TCAC CCAGT GTGA                TGTTCTCCCGAATCG  45 395
MTP40_RS02055  441374 ..  441384 +  -2.6  -2.69178   AGTATCTGAACATCT                 TATT TTG AATA                 TCATGTAATGTCGTT  41 18
MTP40_RS02060  441813 ..  441849 +   -11  -5.27335   AGAATAACCGGAATG    GCCAGTGTATTGTACG ATTTG CGTATGATATGCTGGC    TTTTTGTTTGGCGGA 100 42
MTP40_RS02105 NONE
MTP40_RS02110 NONE
MTP40_RS02115 NONE
MTP40_RS02120 NONE
MTP40_RS02125  457411 ..  457424 +  -2.3  -3.68052   ACTCAACAACGATTT               TGGCG GTAT CGGCA                CTTTTATTTTGATAT  50 89
MTP40_RS02130  458959 ..  458975 +  -2.3   -4.1711   CGGATCATCCGCAAA              TTAACTT GTA AAGTAAA              TTTATTAGAGATAAT  57 22
MTP40_RS02135  459854 ..  459871 +  -2.7  -3.40511   AAGGCATTCTGTTTG             CGAGAAG GATG TTTCTTG              GTTTTGTGTTCACTA  47 72
MTP40_RS02140 NONE
MTP40_RS02145 NONE
MTP40_RS02150  464334 ..  464345 +    -3  -3.91144   TGGAAAACTGTTCCA                TATC GAAT GATA                 TTTCTGACCTCTCCC  54 429
MTP40_RS02155  467208 ..  467243 + -15.6  -4.86385   TCAGCGCAGAAAAAA    CGAACGATGTC-ATCCG ATT CGGACAGACATCGTTCG    TTTCTTTTTACAGGT 100 43
MTP40_RS02180  475212 ..  475268 + -11.1  -5.56263   AGATAATGCAGTGCT GACATAGAAAACGTCCCCGTGCAG TTTTGATATC CTGCACGGGGACGTTTTGTGA-TC TTTTTATTTTCTCAT 100 35
MTP40_RS02195  478894 ..  478922 + -17.5  -5.36441   CTCTGATCTTCTTTC        TCCCCTCTGCTGT ATA ACGGCAGGGGGGA        TTTTTTGTGTCAACG 100 44
MTP40_RS02210  482044 ..  482074 + -18.5  -3.30701   TGGGTGACGGAAAAA       CGAAAAAGCTCCC ATTAC GGGAGCTTTTTCG       TTGCATTTGGTCGAA 100 34
        rlmD NONE
MTP40_RS02220  484655 ..  484704 + -27.3  -3.78934   ATCATACCCTCCTAT GAAAAGGGACTGCTGCACTGGGG TCTC CCCCTGTGCGGCAGTCCCTTTCC TTGTTCTGGCAGGGC 100 24
MTP40_RS02225 NONE
MTP40_RS02230  488349 ..  488377 + -15.4  -5.26316   CTGAAAAAACCAAAA        TGGGAGATGTCG GTACA CGGCATCTCCCA        TTTTTTATGCGATGG 100 37
MTP40_RS02245  490026 ..  490059 + -13.3  -5.85244   ACCAAACGATGAAAA     TCCGAACTTTTTTCC AATA GGAGAAGGGTTCGGA      TTTTTTGTTTTCCTT 100 37
MTP40_RS02250 NONE
MTP40_RS02255  491752 ..  491785 + -12.5  -5.17786   ACCAAACAAGAAAAA     TCCGAACCTGTTTCC GATT GGAGAAGGGTTCGGA      TTTTTCGTTTTCTTC 100 37
MTP40_RS02260  492207 ..  492238 + -12.3  -4.08042   ATACATCTATGTAAG      GCAGGGCGTTCCT TTCATC GGGAGCGTCCTGC       TGTTTTTATGCTGCA  95 87
MTP40_RS02275 NONE
MTP40_RS02280  495875 ..  495885 +    -4  -3.24022   AAAGAAAAATCGTGA                 TTGT GCT ACAA                 GTTTTCTGGAAATTT  48 45
MTP40_RS02285  496564 ..  496575 +  -4.4  -3.66178   AGCTGTGGAAAAGTT                CGAT AACT ATCG                 TTTAGCATTAAAAAC  55 115
MTP40_RS02290  497251 ..  497264 +  -3.1  -5.90231   TTTTTCTCCGTCTTG               CTACA ATAT TGTGG                TTTTTTTCTATTTGT  93 203
MTP40_RS02295  498150 ..  498160 +    -4  -3.24022   AAAGAAAAATTGTGA                 TTGT GCT ACAA                 GTTTTCTGGAAATTT  48 223
MTP40_RS02300  498690 ..  498702 +  -2.7  -2.88268   CGATATACAGTATTC                GATTG CAG TAATC                CTATTTTCATTAAAG  42 15
MTP40_RS02305 NONE
MTP40_RS02310 NONE
MTP40_RS02315  501058 ..  501094 + -13.1  -4.96468   GTTGCTTCGCTCCAC    CAAGAACTCCAGCGTTG TGA TGACGCTGGAGTTTCTG    TTTTATTTGAATTTC 100 6
MTP40_RS02320  501229 ..  501264 + -15.6  -3.34715   CACCCGCGCCCATAA    AAAAACCGCCGACGTA TCTC TATGTCGGCGGTTTTC     TGTTTGCAGAGGATG 100 43
MTP40_RS02330 NONE
MTP40_RS02335  503965 ..  503983 +  -8.2  -4.45723   AAGAGAAAGAAGCTG             CGGTAGTA TTA TACTACTG             TTTTAGTGTGTTATT  80 42
        mnmA NONE
MTP40_RS02345  505999 ..  506035 + -20.9  -4.18018   GGTTAAAAACGAGAA    CGCCCCTCTCCGGTCTC ACA GATGTCGGAGAGGGGCG    TTTTGGGTCAGGGGA 100 35
        ilvA  507471 ..  507489 +   -16  -4.86731   TTCTGACCGCCTCAT             CTGCCGCC TGC GGCGGCAG             TTTTCTTTCAAAACA 100 43
        ilvB NONE
        ilvN  511495 ..  511512 +  -2.7  -4.18494   CGAGCAGATGCGAGC             CTGAG GGGTTCAA CTCAG              TTTTCCATAAAAATC  59 163
        ilvC  512744 ..  512767 + -12.4  -4.77165   TTTAAAACTAAGAAA          GGCTCCCTCC TTTG GGAGGGGGTC           TTTTGTTATAAGGAA 100 177
        ilvD  514481 ..  514507 + -15.2  -5.71712   CGTATAACAGCAAAA         GCTCCCGACG CGCAGAA CGTCGGGAGC         TTTTTTTGTGTCAGG 100 51
MTP40_RS02410  521318 ..  521349 +   -13  -5.29445   ATTGACATTTCCGGA      GCCCTGCTGGCA ATTCCCTC TGCCGGCGGGGC       TTTTTGTTGTTGGGG 100 101
MTP40_RS02430  524910 ..  524931 + -15.9  -4.65895   AACCGATAAAAAGGA           GAGCCGTGC AGCC GCACGGCTC            TTTTTGAGTGAGAAC 100 40
MTP40_RS02435 NONE
MTP40_RS02440  526649 ..  526675 + -15.9  -4.05446   ATAGTCCTCTGCGCC         GCAGCCTCCGT CCATA ACGGGGGCTGC         TTTGTCGTTCAGGAA 100 368
MTP40_RS02450  528345 ..  528381 + -27.5  -5.35224   ATCTGTGTATTTCAG    CCCTCTCCGTCAAGGCC TCA GGCTTTGACGGAGAGGG    TTTTCTTTTTATAAA 100 40
MTP40_RS02455  529271 ..  529294 + -13.9  -4.59081   ATGCAGTGACCCCAA          GCGGCAGAC ACGACC GTCTGCCGC           TTTTCTGTGCCTTTC 100 32
MTP40_RS02460  530813 ..  530828 +  -7.5  -3.82084   AGCAACGCCCTCAAT              CCGCC ACTGGC GGCGG               TTGTTGCTGTTGCCC  69 143
         cmk NONE
MTP40_RS02470  532241 ..  532278 +    -4  -3.02144   ACACCTCCCCTGGTA   GGGGAGACAAGAAAAC AACAGC GTAAACTTGGCTCCCC    TATTAGGGGAGCTGC  47 64
MTP40_RS02475  534288 ..  534320 + -20.6  -5.06414   GACACAATGCGACTG      CAGCCCCGTTGCCG GGTAA CGGCGGCGGGGCTG      TTTTTGTTAACAAAG 100 66
MTP40_RS02480  534984 ..  535006 +  -7.6  -3.22448   CACCTACGGTGCAGC           CACCTCCCTC TGG GAGGGAGGCA           TTGCCTTGCATTTGC  62 54
MTP40_RS02485 NONE
        deoC  536164 ..  536187 + -13.2  -5.27335   AGATAAGAGTGCAAA          CGCTCAGAGC TTCG GTTCTGAGCG           TTTTTGTTTGCGCAA 100 267
        metK  537426 ..  537465 + -18.7  -2.78384   CTGTAAAACTGAAAC  GCAAAGCGCCCTGTACC GTGAAA GGTGCAGGGCGCTTTTC   TATGGTGGGCGGCAG 100 35
MTP40_RS02500 NONE
MTP40_RS02505 NONE
MTP40_RS02510  540620 ..  540630 +  -4.6  -2.71712   AGGAGAATAAATCTC                 TCCG TCG CGGG                 CTTTGCCGCGACAGC  46 46
MTP40_RS02515 NONE
MTP40_RS02520  542639 ..  542672 + -21.1  -4.19735   GTAAATAACAGAAAA     GCAGCTGCGTTCCGT GTGT GCGGAGCGCAGCTGC      TTTCGTTTTGCAGAA 100 33
MTP40_RS02530 NONE
        pyrF NONE
MTP40_RS02540 NONE
MTP40_RS02545  547884 ..  547898 +  -2.8  -2.62396   GGCTGCGCCCGAAAT               GCTGAA TAA TTGAGC               TGATATACCAGGATA  41 17
        pyrE NONE
MTP40_RS02555 NONE
        carB  553040 ..  553053 +  -3.8  -3.73402   AAAATGTAACTCGTG               CGCA ATATTA TGCG                TTTCGTGCGCAATCT  55 46
MTP40_RS02565  553498 ..  553524 + -13.7  -4.68593   GTTCCTCTGACCGCA         GAGCCGTGCCC CAAAA GGGTGCGGCTC         TTTTTGCGTGCTGAC 100 52
MTP40_RS02570  554835 ..  554862 +  -5.4  -2.87344   CAGCCCCCTCAAGGA        GGGAGCCTGCCC GTAC GGTAAGCCTCCC         TCTCTGAGGGAGGTG  49 72
MTP40_RS02575 NONE
MTP40_RS02580 NONE
MTP40_RS02585  556838 ..  556866 + -18.2  -4.43859   AAGAAGAAAACGCAA        TCCCCGGCGGTC AGATC GACTGCCGGGGA        TTTTCTGCGCTTATA 100 39
MTP40_RS02590  557344 ..  557377 +  -4.7  -3.79747   GCGAAGAAGATTTAA     CACTTTTTAAGTGAT AAAT ATCATTTATAAAGAG      TTTGATCCTGGCTCA  59 200
MTP40_RS02595  559127 ..  559141 +    -5  -3.55444   CAAGAGGATACCAAA               TGTTCT GAA AGAACG               TTTGAAAGGTCAAGC  55 275
MTP40_RS02600  562088 ..  562105 +  -2.1  -3.18383   GTAGAACAGAAATGT             TAT-ACTG AGC CAGTCATA             TTGGTCGGTGACGAT  43 130
         rrf  562228 ..  562267 + -10.8  -4.87273   GTAGTCGCCGACTTA  CATGAAACCCCTGAGGAA GAAA TTCCTTGGGGGTTTGTTG   TTTTTGTGCGGTATT 100 28
MTP40_RS02610  563305 ..  563336 + -19.6   -4.4767   GTATGCAAAATGAAA      GAAGCGCCTTACCT GACA GGGTAAGGCGCTTC       TTTTCTCATAAATAA 100 58
MTP40_RS02640  569603 ..  569636 +  -6.7  -5.92399   ACCAGACAAAAATAA     TCCGAACTTGTTTCC GATA GGAGATGGGGTCGGA      TTTTTTGTTTTCTTC 100 37
MTP40_RS02645  570059 ..  570086 + -16.4  -5.38326   ACACGATAAGTAAGG        CAGGGAGTTCCC CGAC GGGAACTTCCTG         TTTTTCTTTGGTTGC 100 88
MTP40_RS02675  576922 ..  576961 + -13.6  -3.07895   AGCGTAATATTTCCC  GCATGGCACCTGCCTCTT GCAA AAGGGACGGGTGCTGTGC   TATGTTCAGAGTGAG  86 34
MTP40_RS02680  579703 ..  579735 + -13.5  -4.77173   AAAAAACTATAATCA      ACGATGCCCTTTGTT ACT GACAAGGGGCATCGC      TTTGTTTTGTGCGCG 100 39
MTP40_RS02705  586318 ..  586332 +  -4.2  -2.85999   GTGTAAAAGTGAGGT               GCTTTC CAT GAATGC               TGTGATCTACGCTCG  45 126
MTP40_RS02710  587812 ..  587850 +  -8.3  -4.64952   TCGACCACGAGAAAA  GCCACGATA-AACCGT TTATAAGC GCGGTTTTGTCGTGGC   TTTGTTTCTGTCATT  83 16
        cysK  589525 ..  589554 + -17.9  -5.67063   GCTATAACCCCACAA       GCCGCTGCGCAGA AATT TTTGCGCGGCGGC        TTTTTTTGTGCTACA 100 41
MTP40_RS02725  590652 ..  590665 +  -8.1  -3.62616   CAACTTTGCGGATGA               GGGAG CGGG CTCCC                TTGTATGTGGTGATA  62 136
MTP40_RS02735 NONE
MTP40_RS02740  591939 ..  591965 + -15.3   -5.5943   CTACTGACAAAAAAA         TGAGACTGCCA AGGCC TGGCAGTCTCA         TTTTTTTGATGATTT 100 34
MTP40_RS02750  593939 ..  593968 + -18.7  -4.39166   GAATGCAATGCAAAA       GGAGCTGTACTCC CGCG GGGGTACAGCTCC        TTTTCGTATGTACAG 100 48
MTP40_RS02770  598202 ..  598228 + -13.7  -5.23765   TATCAAGAGAACTTG         TGCCGCTTCGG GTCTG CCGGGGCGGCA         TTTTTGTCTTGTTTG 100 56
        clpB  601114 ..  601152 + -14.7  -4.99035   AACAAGTAACATTGA   TGTGCTTTTCATCGCGG AACAG CCACGGTGGAAAGCACA   TTTTTGTATCCCTAG 100 117
MTP40_RS02780  602677 ..  602713 + -25.9  -4.78572   ATAGAAACAGTGAAA    CGCCGCCGGGTGGAGCT TTT GGCTCTGCCCGGCGGCG    TTTTCTTGATTCAAG 100 54
MTP40_RS02785 NONE
MTP40_RS02790 NONE
MTP40_RS02795  607289 ..  607322 + -16.1  -5.61689   AACGGTTCTGTTTGA     CGGACTGTTCCGGAA AAAA TTCTGGAACAGGCCG      TTTTTTCTTGCTTTT 100 84
        rfbA NONE
        rfbD NONE
        rfbB  610660 ..  610697 + -17.9  -4.70659   TCTAAAAAGCAAAAA   GTCCCATGCCC-GCAC CGCCAAA GTGCTGGGCATGGGAC   TTTTTGCGTCTGGGA 100 160
MTP40_RS02835  613828 ..  613843 +  -5.4  -4.07568   ACGGGGAACGGCTCC              GGTAAG CCCT CTTGCC               TTTTGAAACAAAAAG  64 21
MTP40_RS02840  615441 ..  615471 + -14.1  -4.20868   TGGTAGAAATAAGAA       TGCCCTGTACCAT GCAAA ACGGTACAGGGCA       TTGTTGTTTTGAAAG 100 63
MTP40_RS02865  621309 ..  621338 + -17.9  -5.14965   GGTATGTAGTTTACA       GCCGTCCCATGGA ACGT TCCGTGGGGCGGC        TTTTTTCGTCCCACT 100 277
MTP40_RS02870 NONE
MTP40_RS02875  624579 ..  624591 +  -3.3  -3.54424   ATCATTCTCTATCAA                CATCG AAA CGAGG                TTTGACGCAATGACC  50 8
MTP40_RS02880  625897 ..  625930 + -13.3  -5.22258   AAAATATGCCCGGAA     GAGCCTGTACACTGAT GAA AAC-GTGTACAGGCTC     TTTTATTTTGGTTTA 100 56
MTP40_RS02885 NONE
     spoIIAB NONE
MTP40_RS02895  627884 ..  627917 +  -4.7  -3.79747   GCGAAGAAGATTTAA     CACTTTTTAAGTGAT AAAT ATCATTTATAAAGAG      TTTGATCCTGGCTCA  59 413
MTP40_RS02900  629524 ..  629537 +  -2.4  -3.51161   AGGGCCCTGAAAAGG               GGTT ACTCAA AACC                TTATGTGGGGGTTTA  47 132
MTP40_RS02905 NONE
MTP40_RS02910  629885 ..  629899 +    -5  -3.55444   CAAGAGGATACCAAA               TGTTCT GAA AGAACG               TTTGAAAGGTCAAGC  55 211
MTP40_RS02915  632846 ..  632863 +  -2.1  -3.18383   GTAGAACAGAAATGT             TAT-ACTG AGC CAGTCATA             TTGGTCGGTGACGAT  43 130
         rrf NONE
MTP40_RS02925 NONE
MTP40_RS02930  633151 ..  633178 + -15.8  -5.60689   GGTGCACCAGATATT        GAACGTCAAATC GTAA GATTTGACGTTC         TTTTTTGTTATGTAA 100 32
MTP40_RS02950 NONE
MTP40_RS02955 NONE
MTP40_RS02960  639230 ..  639240 +  -2.6   -4.0827   CGATTGTGCTACAAA                 TTTT CAG AAAA                 TTTATGTGCATCTAT  56 108
MTP40_RS02965 NONE
MTP40_RS02970 NONE
MTP40_RS02975 NONE
MTP40_RS02980  640693 ..  640735 + -16.5  -4.67354   ATGCGTAGTTAATAA TAGACAGCCATCTATTTGC AAGTC GCAAGTAGATGGCTGTCGG TTTTATCTGTATATT 100 42
MTP40_RS02990  641905 ..  641920 +  -3.9  -3.29626   GGTGCCATCCTCAAA              TCGGG CTTCTA CCCGG               TTGGTGTCCATGTTA  47 237
MTP40_RS03000  642709 ..  642735 + -15.2  -4.26189   AGATTAAGCATAAAA         GGGTATGCGGCT ATA AACCGCATACCC         TTTTACACTTTATCG 100 34
MTP40_RS03025  646632 ..  646653 +  -9.5  -5.28983   TTGAGCATTTAAGAG           GATGATCGC GCAA GCGATTATC            TTTTTGTCTTTTAAG 100 21
MTP40_RS03035  649663 ..  649682 + -13.6  -5.18643   AAATGGGGAAGATTT            GGCGTGAC TTCG GTCACGCC             TTTTCTTTTGCTTCC 100 162
MTP40_RS03080  661915 ..  661957 + -22.1   -4.3898   GATTCCCCACAAAAC ACAACGCCCCGCACCGG AAGGAGAAA CCGGTGCGGGGCGTTGC TTTTATGGGGGTAAT 100 49
MTP40_RS03105  670010 ..  670039 + -17.3  -4.43477   TGCAATAGCAAAAAA       CAGGCTGCG-GAAG ATG CTTCTCGCAGCCTG       TTTTGGTTCAGTGGG 100 43
MTP40_RS03115  671817 ..  671842 +  -3.9  -3.36878   TGACCGAAACCGCTC         TGAAAGCCCCT TGAC AAGGGCTTCCG          TTCTGCCTGCGTGCG  50 38
MTP40_RS03120  673220 ..  673230 +    -4  -2.89793   GAAAAAAAGGCGGAA                 GTAT GAT ATAC                 TGGTTCTATCAATGA  45 20
MTP40_RS03125  674471 ..  674527 + -29.2  -2.78384   TCCGGGAAACATAAA GCAGAACAGGCATCCTG--CGATACCGT TTG GCGGTATCGGGCAGGATGCCTGTTCTGC TATGATGAAGAAAAA 100 27
MTP40_RS03145  679018 ..  679044 + -16.8  -2.55074   GGCAAGGTGAGCGGA         GGAATTGTGTCA AAA TGACACAATTCC         TCCGTTCACCTTCAA 100 31
MTP40_RS03150  680969 ..  680990 +  -2.1  -4.00934   GGTTCGCCTGCGGCG           GGTACAGCC TGCG GGCTGGGGC            TTTCCTGTTTAGCAT  56 180
MTP40_RS03220  696688 ..  696721 +  -9.7  -5.57729   ACCACGTCAACAAAA     TCCGAACTTTTTTCC GATA GGAGAAGGGTTTGGA      TTTTTTGTATTCTTT 100 37
MTP40_RS03225  697103 ..  697143 + -14.2   -5.1861   AGAAAGCTAAATGAA TGCTGGACATTACC-GCTT TTTT GAGCTGGTGATGTCCGGCA  TTTTTTAGTGCTGGC 100 31
MTP40_RS03230 NONE
MTP40_RS03235  699299 ..  699313 +  -2.8  -3.11966   TCGTTTTGTTGTTGA               TGGTTC TTG GAGTCA               TGTTGAGTGGCTTTT  45 66
MTP40_RS03240 NONE
MTP40_RS03245 NONE
MTP40_RS03250  702675 ..  702694 +   -15  -5.00616   TGATACAACGCAGCG            GAGCCGCC CTTG GGCGGCTC             TTTTTTACGCAGAGG 100 38
MTP40_RS03255  704906 ..  704947 + -25.5  -3.64703   ACAAATGTTGTGTGA TATGTACCCCCCATACTGG ACAT CCAGTATGGGGGGTATATA  TTTAGGTGCCCACCC 100 118
MTP40_RS03265  708453 ..  708501 + -14.9   -4.2679   CGGAAAAAATAAACA AAATGAGGCCGTTCCGCTTCTCT GAGAA AGAGA-G-GGAACGGCCTCATTG TTTTGATCAGACTTC 100 29
MTP40_RS03280 NONE
        malQ  713863 ..  713910 + -19.3  -4.88067   GCATTAAAAACCATA AAACCCCATGTCCGGGCCGTT TCACAC AACGGTCTGGACGTGGGGTTC TTTTTCTGGATCAGT 100 43
MTP40_RS03315  719829 ..  719844 + -10.4  -5.14965   AAACAAGCAATTCAA              GACCGC TTCG GCGGTC               TTTTTTGCTGCCCGT 100 41
MTP40_RS03325 NONE
MTP40_RS03330  724780 ..  724798 +  -4.5  -3.60805   TAGTATCGAACTCTT             CTTGTGC GAAAA GCGCAGG             TTTACGATAACATAT  55 62
        ftsZ  726028 ..  726043 +  -7.5   -2.7535   AGTTACAGTGTGAAC              CGCCC GGGAGG GGGCG               TGGTCTCTTGCGCGC  57 48
MTP40_RS03340  726714 ..  726740 + -15.3  -4.74706   ACTGTATAACAAAAA         GACGATGCACA AACGC TGTGCATCGTC         TTTTTGCGTCTTAGG 100 32
MTP40_RS03390 NONE
MTP40_RS03395 NONE
        ispE  738215 ..  738258 +   -11  -4.83169   TGCTGTAATATGCAT AACCTCCTTTCCGATGGGGA AAAC TGCCCAAAGGAAAGGAGGTC TTTTTGTGCAGACCT 100 33
MTP40_RS03405  738472 ..  738502 + -19.1  -4.89339   CGGAAGAATGAAAAA       CGGCTGCTGCACG GAAAA TGTGCAGCAGCCG       TTTTTGTGGATCATT 100 30
MTP40_RS03425  740904 ..  740933 + -18.7   -4.4767   CTAAAAATGACAAAA       CCGGCTTTCCTGT GGCA GCAGGAAAGCCGG        TTTTGTGCTGAATGG 100 44
MTP40_RS03445 NONE
MTP40_RS03450  745055 ..  745074 + -12.2  -4.87893   CATATAAACGAAAAA            GAGACGCT GAAA AGCGTCTC             TTTTTGCTTCCGGTT 100 34
MTP40_RS03460 NONE
MTP40_RS03465  753076 ..  753104 + -13.1  -4.52857   TTGTGTGAAATTTCG        CGCGGCTGTCC TGCAAAT GGGCGGCCGCG        TTTTCTATGCCAAAT 100 218
        infC NONE
        rpmI NONE
        rplT  754329 ..  754361 + -11.2    -5.186   TGATAAAGACCTGAA      AGACGCCCGCGCGT AGTAA ATACGCGGGCGTCC      TTTTTGTATATTTTA 100 38
MTP40_RS03485 NONE
        dprA  756369 ..  756387 +  -8.8  -2.83784   CGCTGACGCTCGCCA             GCTCCCCT AAT AAGGGAGC             CTTTGGCATTTCGTT  62 77
        topA NONE
       trmFO  760132 ..  760147 +  -8.2  -2.64155   GCAGGTGCTGACCAT              GGGCCG CAAT CGGCTC               TCCCTTTGGGAGAGC  61 125
        plsX NONE
         rnc NONE
         smc  765779 ..  765795 +  -2.1  -3.84451   CAGCAAAACAAAGGA              GAGAACC AAT GGGCCTC              TTTGGATTTGGCAAA  52 167
        ftsY NONE
        rdgB NONE
MTP40_RS03530 NONE
        nadD NONE
        yqeK  768997 ..  769008 +  -3.6  -4.83169   CCGGGCTGCAAAGGC                CGGG TGAG CCTG                 TTTTTCTGCACACAT  69 19
MTP40_RS03545 NONE
        rsfS NONE
        leuS  773588 ..  773600 +  -3.5  -3.34517   CGCTTTGCCGGAGAG                TTTTT TCA AAAAA                TCTTTCAAAAAAGGT  48 50
        rpsU  773941 ..  773969 + -20.5  -4.61873   TTGCTAACGCCGATG        TAGGAGAGCCTGA AAC TCAGGCTCTCCTA        TTTTCATTTATGAAA 100 83
MTP40_RS03565 NONE
MTP40_RS03570  775774 ..  775784 +  -3.2  -3.05997   TGAGATTTTACTAAT                 GGAG GAA TTCC                 TATGATTTCTGCAGG  45 218
         efp  776356 ..  776382 + -12.3  -5.27477   TAATTTACCGACAGA        CCGGGCA-GCGG GCAA CCGTGTGCCCGG         TTTTTTGATTAAGAT 100 38
MTP40_RS03580  776998 ..  777025 + -17.8  -5.27923   AAAGCACAACAAAAA        GGACCGTCTCCT CAGC GGGAGACGGTCC         TTTTTTATGCCGTTC 100 39
MTP40_RS03590  779293 ..  779330 +   -15  -4.65895   TTGAAAAAATATGAA   GTCCCATGTCC-GCACC GTTAA GGTGCTGGGTATGGGAC   TTTTTAGCTCAACAA 100 41
MTP40_RS03595  780372 ..  780415 + -15.5   -2.9518   CGTTCCTGTTTGTAT GACAAAACCGCCCTTCCAGT TTGAT GCCGGAAGGGCGGTTTT-TC TATGTGAGTATTCAG 100 445
MTP40_RS03605  782839 ..  782857 +   -16  -3.01712   GCCGCTCCGCGTCCA             GCTCCCCC AAA GGGGGAGC             TCTTGACAAAACCGG 100 68
        thiI NONE
MTP40_RS03615 NONE
MTP40_RS03620  786420 ..  786458 + -26.2  -5.66684   CATTGGTATAGGACC   GACCCTCTCCGTCATTGC TGC GCAATGCCGGAGAGGGTC   TTTTTTTCTAAATTA 100 30
        secA NONE
MTP40_RS03630 NONE
MTP40_RS03635 NONE
MTP40_RS03640  791375 ..  791405 +   -17  -4.24786   TCGGATAAAAACAAA       GACCTCCTCTGG AAAACGG CCAGAGGAGGTC       TTTCTATATTATGGG 100 41
MTP40_RS03665  794843 ..  794888 + -16.3  -3.01854   GGATGGACCTGTGAG GAAAAACAAAAAGGCAGAGCC CGCG GGCTCTGCCTTTTTGCTTGCC ATTTACTTCTGGTTC 100 27
MTP40_RS03685 NONE
MTP40_RS03690 NONE
MTP40_RS03695  802294 ..  802338 + -16.7   -4.4261   CTGAGCGCATTCCAA CGGGCAGGAAACCGGAAAA TCAAAAT TTTTTCGGTTTTCTGCCTG TTTTGGTGTTGACAA 100 50
MTP40_RS03700 NONE
        rpmF  803148 ..  803176 + -15.3  -4.62441   TTGGTGTTATGTTGA        GAAGGGGATGGCG CAA TGCCTTCCCCTTC        TTTCTTTGTCTGGAG 100 63
MTP40_RS03710 NONE
         der  805909 ..  805929 +  -4.7  -3.35996   AGGGGAGGCGGCTGT            TGATGATGA CCT TCTTCATCG            TTCTGGCTGCCGCTG  52 42
        plsY  806586 ..  806626 + -24.1  -4.18018   CCGGAACAAAAATAA  CAGCGCATCCTTCGGGCAG AGC CTGCCTGCGGGATGCGCTG  TTTTGCGTGGAGGGG 100 41
MTP40_RS03725  806839 ..  806876 + -11.5  -4.82901   CGCTATTCTCCACCA   AAAAAGCACTGTACTTC GTAG GAAGTATGGTGCTTTTC    TTTTTCTCAGCCGCA 100 26
MTP40_RS03740 NONE
MTP40_RS03745  810778 ..  810803 + -18.3  -5.09245   ATTGAACCCTGCCCA         GCGGGGGCGGT TTTG ACCGCCTCCGC          TTTTTGTGGTTTTCG 100 40
MTP40_RS03750 NONE
MTP40_RS03755 NONE
MTP40_RS03760 NONE
        gnpA  815048 ..  815091 + -24.8  -2.87211   TCTCCGTTTTATAAG CAAACACCCCTCTGCATTCC GAAA GGAGCGCAGAGGGGTGTTTG TGTATCCGGGCGGCT 100 43
MTP40_RS03795  821522 ..  821556 + -21.5  -5.49579   GCAACTGAAAAAGAA     CCCGCAGGGGGCCTG GGCGA CAGGTTCCCTGCGGG     TTTTATTTTTTGTGA 100 33
MTP40_RS03800  823177 ..  823197 +  -5.3   -5.2189   GCTTTTCTTTGAGCT            GTCGCTTCT TGG AGTGGCGGC            TTTTTTAATGCTTCC  85 296
MTP40_RS03820  828045 ..  828080 + -13.4  -4.48221   TAATATTTGAGTTTC    TTGGAACAGGCATGAT TTCG GTCATGCCTGTTCCGC     TTTTATCAGTTCATC 100 89
MTP40_RS03860 NONE
MTP40_RS03865 NONE
MTP40_RS03870  839081 ..  839117 +  -8.1  -4.72272   AAAAGAAACTCAAAA   TGCCCTGTCTGGACCC AAAACC GTGTC-AGACAGGGTA    TTTTTAATACAACAA  85 40
MTP40_RS03875  839658 ..  839672 +  -4.3  -2.64099   GTGATACAATGCTTT               TGACA GGAGG TGTCA               CTTATGATGCAGACA  44 77
MTP40_RS03880 NONE
MTP40_RS03885  840250 ..  840289 + -20.8  -4.74132   CTGGAATAAAACAAA  GAGCAGAGCGCTCCAGCC AGCT GGCTGGAACACTCTGCTC   TTTTTAATGCAATAT 100 32
MTP40_RS03920  847546 ..  847584 + -16.9  -3.66732   TTTTGAATAACACAA   GAAACGCTCTTGTCGGT GTAAA ACTGGCAGGAGCGTTTC   TTGTTGAAGTGATTA 100 31
        treC  851948 ..  851988 + -14.4  -5.24129   GTGAGCAAGACAAAA GCACTTTCCC-T-TATTTGC AAT GCAAATATAAGGGAAAGTGC TTTTTTGTAAGGGCA 100 105
MTP40_RS03960 NONE
MTP40_RS03965 NONE
MTP40_RS03970 NONE
MTP40_RS03975  856381 ..  856403 + -13.5  -5.65177   TTCACCTTCTTAAAA           TCCGGTGCT CAAAA AGCACCGGA           TTTTTTTATCAATGT 100 41
MTP40_RS03980 NONE
MTP40_RS03985 NONE
        trxA NONE
MTP40_RS03995 NONE
MTP40_RS04000  860213 ..  860224 +  -5.8  -3.19246   TAAAATGAAAAGCAC                GCAC TTTG GTGC                 TTGCCTTGGACTTGC  55 52
MTP40_RS04005 NONE
MTP40_RS04010 NONE
MTP40_RS04015  864207 ..  864240 + -21.1  -3.53012   CGGCTTTCAAAAACA     GAGCGGGCAAGCGTG ATAC TGCGCTTGCCCGCTC      TTTGCCCAAAAGGAC 100 101
MTP40_RS04020 NONE
MTP40_RS04025  867881 ..  867895 +  -2.8  -2.52676   CCAAAGACATCAGAA               TAGGAG ATA CTACTA               TGAATTACAGCGCTA  40 46
MTP40_RS04030  868790 ..  868817 +  -6.2  -3.34468   AAGGCAACGGTAAAA        TGCGCGACCGTCG ATC CG-CGGTTGAGCG        TATGTTTCATTAGAA  57 57
        trxA NONE
        trxB  870492 ..  870526 + -12.9  -4.29472   ATTAAGCGACCCCAA     CGGTCTGAATCCTGT ATTGC ACAGGGCTCAGGCCG     TTTAGTTTTAATTTG 100 269
MTP40_RS04065 NONE
MTP40_RS04070 NONE
MTP40_RS04075  875130 ..  875160 + -22.7  -4.87318   TGAAAATGGATCGAA       GCGCAGCCGCAGA GAATA TCTGCGGCTGCGC       TTTTTGCATTTTGAC 100 142
MTP40_RS04085  875846 ..  875881 + -14.8  -4.93898   TTTGAAATAAAAAAA    TAGACGGATGTCTGTC AACT GGCAGACATCCGTCCG     TTTTTATGATAATCT 100 36
MTP40_RS04130 NONE
MTP40_RS04135  882692 ..  882734 + -22.9  -3.53761   AAAACATATAATAAA TA-AGCAGCGCCCGCCGGGA GATC TTCCGGCGGGCGCTGCTGTG TTTAGAGGAACGTTA 100 236
MTP40_RS04155  885952 ..  886005 + -13.9  -4.23213   CTGCTATATAAACTA AAAAAGCCGCCGAGGACATCTCCCCA AAA TGGGAAGA-GTCCTCGGCGGTATTCG TTTATTGGGTCTGCG 100 25
MTP40_RS04195  891604 ..  891643 +  -3.6  -4.17425   AATTCTTTTGCCGTT  TGCTGGGCAAGGGCG-AGA TAT TCTTCGGTTTTGCTTGGCA  TTTTGGCCTCCTTCT  60 348
MTP40_RS04285 NONE
MTP40_RS04290  907291 ..  907319 +   -19  -4.21933   GATTAAATATTGCAA        GCACCGGTATGG AAAAC CCATACCGGTGC        TTATTTTACGCTTGA 100 49
MTP40_RS04340 NONE
MTP40_RS04345 NONE
MTP40_RS04350  919659 ..  919674 +  -3.2  -5.72207   CTTCGTGCTAAAATG              TCAGCA GTTA TGCGGA               TTTTTTTCCTTTCCC  91 484
MTP40_RS04420  928168 ..  928197 + -22.3  -5.37043   TGGGATAAGAAAAAA       TGGACGGCTCTCG AAAA CGAGAGCCGTCCA        TTTTTTATGTGCGGT 100 33
MTP40_RS04465  937170 ..  937214 +  -5.2  -4.91109   CTCAAAAACCAATTG CACCTCCTGCATTTCTCTGCTA CAA TGG-AGA-AAACGCAGGAGGTA TTTTTATGGTCAAGC  78 60
MTP40_RS04470  937539 ..  937589 + -17.6  -4.73682   TGAACATGCAAAAAG AACACCCCCTCTGCGGCGCAGCTT CAG AAACTGCCGTGCAGAGGGGGTGTA TTTTGTGTTATGAGC 100 42
MTP40_RS04500  947741 ..  947766 +  -5.5  -2.56271   CCACGGTCCTGCGTC         TGGATTGACAGG ACA CCTGTC-ATGCA         CTATTATAATAGGGA  48 18
MTP40_RS04505  948295 ..  948309 +  -4.3  -3.27771   GAAGCCGCATTGAGA               GAGAA AGGGA TTCTC               TATTGATATTGTAAG  50 5
MTP40_RS04510  948955 ..  948990 +   -25  -3.65425   ACAGAATCGTAATCA    TGAGAAAGGCTCCTGC TTTC GCAGGAGCCTTTCTCA     TTTAAAATATATGGA 100 40
MTP40_RS04550  955155 ..  955177 +  -3.3  -2.87132   GGAGGCCCTGGCGTT           GCGGAACGC CCTGC GAGTTCCCC           TCTATGCCAAGGGCC  43 91
MTP40_RS04555  957544 ..  957562 +  -8.9  -3.56643   AGCGTGCTCGCCCTC             TCCGTCA AATCC TGACGGA             TTTGCCACCTCTCCC  71 46
        rlmH NONE
MTP40_RS04565  959876 ..  959902 + -10.8  -5.64873   AAATAGCATTTTCTG         GGAGCTGCTGCG TTT TGTGGCGGCTCC         TTTTTTGTTGTTCGG 100 41
MTP40_RS04570  961261 ..  961290 + -10.1  -5.04356   AAATAATTCGTTAAA       TCCTTACAGTCTG TGAT TAGTCTGTAAGGA        TTTTTGCTTATTTAG 100 52
MTP40_RS04575  962061 ..  962088 + -14.2  -4.32678   GATATAACTTTTACT        GAAACGTGGGCC GCAA GGTCCGCGTTTC         TTGTTTGTTTGGAGG 100 155
MTP40_RS04580 NONE
        nusA NONE
MTP40_RS04590 NONE
MTP40_RS04595 NONE
        infB  966943 ..  966991 + -14.6  -3.16154   AAACCTCTCAGGCTC GCATCCG-CTCGCC-AGCTCCCCT GGC AGGGGAGCCAGGCGGGGCGTGTGC TTGCCTCTCCTATTA  91 46
        rbfA NONE
MTP40_RS04610 NONE
        truB NONE
        ribF  970345 ..  970367 +  -2.6  -3.48276   CTGGGAGTATGCCCG           TTCGGGAGTA CCG TTTTCCCGCA           TTCTGTGCCGACGGC  49 101
        rpsO  970673 ..  970715 + -15.6  -4.56597   TGCGTAAGTAATAGA AAACAGAGGGCAGGTACCGC AAT GTGGTGCCTGCCCTTTGCTC TTTTTGAGGAACAAC 100 30
MTP40_RS04630  973034 ..  973065 + -21.6   -4.8048   AATCCATAAATCAGA      GGGACCCCACAGCC GGTT GGCTGCGGGGTCCC       TTTTTGCTGTCCGAA 100 39
MTP40_RS04635 NONE
MTP40_RS04640 NONE
MTP40_RS04645  975146 ..  975174 + -16.7  -4.39166   TGGAGTAAACAAAAA        GGCGGTGTGCCCG GAG CGGACACACCGTC        TTTTGCTGTCTGGAA 100 33
MTP40_RS04660  978716 ..  978734 + -13.2  -3.16068   GCTGATGCGATGCCA             CCTTCCTC TCA GAGGAAGG             CTTTTGCGTTGGCCG  88 80
        fucO  980122 ..  980149 +  -9.1  -5.06414   GTAAACTGAACAAAG        AGGGTCGGGAA CGCCGC TTCCCGGCCCC         TTTTTGTTCCGGGAA 100 44
MTP40_RS04670 NONE
MTP40_RS04675  982587 ..  982610 + -14.6  -5.60993   AATCGTTTTGAGAAA          GGCATCCTCG TTTG CGGGGATGCC           TTTTTTTGTCCCCAC 100 99
MTP40_RS04680  983545 ..  983555 +  -6.8  -2.66435   TATCCATTGAAATTC                 TCCC CCG GGGA                 TGATATGATAGACCT  53 116
MTP40_RS04685  984510 ..  984545 +  -9.7   -5.1244   AAGCGCTGAAATAGA    TAAGAGCCGTGCAGT TCAAAC GCTGCACGGCTCTGC     TTTTTATGTTACTGC 100 32
MTP40_RS04705  987648 ..  987681 + -19.7  -4.76041   ACTAGCATAAGAAAA     GCGGCATCTTTCCGT TTGC ACGGAGAGGTGCCGC      TTTTTGCTGCATATC 100 44
MTP40_RS04715  989792 ..  989819 + -15.6  -5.61881   CGGAGCAGTTTTACA        CAGCCTCGTCCC TTTT GGGATGGGGCTG         TTTTTGTTTTTGCGC 100 334
        alaS NONE
MTP40_RS04725  992896 ..  992912 +  -7.2  -2.87132   CATTTCCATGTGCTG              GGCGGC GAGAA GCTGCC              TGTCTGAGCCGCGCG  57 2
MTP40_RS04730  993566 ..  993589 +  -2.4  -4.44974   GCTGGAGTTGGTGTG          CG-CCTTTTTG CCG CAAACGGGACG          TTTTGTGCCGTTTGC  61 87
MTP40_RS04735 NONE
MTP40_RS04740  996650 ..  996686 + -19.6  -2.62263   ATTGAGAGAACAAGT    AAAAAGGGACGGCGTG GAGCA CACGCCGTCCCTTTTG    TGGTGTCAGGAAAAT 100 36
MTP40_RS04750 1000372 .. 1000399 + -14.9  -4.84527   CCCAAGAAGCGTTTT        TGCCCCTCTGC CCTGCC GCAGAGGGGCG         TTTTTGCTGTATAAA 100 46
        ispF NONE
        cdaA NONE
MTP40_RS04765 1003986 .. 1004017 +  -3.6  -3.17723   GAAGTTTGCAAATAT      TGCCAAGGCCTCCCA CTT TGGG-GGAGGTGGCA      TTGCGTTAGCAATGA  46 110
MTP40_RS04770 NONE
MTP40_RS04775 NONE
        recJ NONE
MTP40_RS04785 NONE
         dtd 1012001 .. 1012017 +  -2.3  -3.30124   TAGAAGGATATAGGA              TATGAAA GCA TTTCATC              TTCTCGGCGCTGCGC  45 78
MTP40_RS04795 NONE
        hemZ NONE
MTP40_RS04805 1015028 .. 1015044 +  -3.7  -3.31144   ATCGCGCTCTGCGGG              GAAAATG TTC CATTCTC              TTGTCCAAATGCGAA  48 42
MTP40_RS04810 1015657 .. 1015686 + -19.3  -3.85698   CCAAAAGCCTTGAAA       GGGCGGTGTCCCC GTAG GGGGATGCCGCCC        TTTCTGCACAGAAAC 100 43
MTP40_RS04815 1016590 .. 1016602 +  -3.3  -3.28712   CTGAGTAAAATTTTG                TGGAG GTA CCCCA                TTATGACCAAGACCG  48 50
MTP40_RS04820 1016887 .. 1016913 + -15.8  -5.60993   TAAGTTTGATTTTTG         CCGCCGGGGCCG CAG TGGTTCCGGCGG         TTTTTTTGTAAAACC 100 38
MTP40_RS04825 1017287 .. 1017312 +  -3.9  -3.99592   CTCAGGCGCTTTGCA         CCAG-CTCCCCT AAT AGGGAAGCCAGG         TTTATGCTGCTGCAT  60 44
MTP40_RS04830 NONE
MTP40_RS04835 NONE
MTP40_RS04840 NONE
MTP40_RS04845 1019156 .. 1019182 + -19.4   -5.1861   AGCCATAGAACGAAC         CGGGCCTGCCCC AGC GGGGCGGGCCTG         TTTTTTGGTGGTGCG 100 40
MTP40_RS04850 NONE
MTP40_RS04855 NONE
MTP40_RS04860 1021973 .. 1021991 +   -16  -2.78384   ATTGCTCTGCCAAGG             CCGCCCCT AGT AGGGGCGG             TGTCATCCCGAAGGG 100 135
        glmS 1024183 .. 1024196 +  -5.9  -2.97735   CAAGCCTTGCCAAAC               CCGCC CGCT GGTGG                TATACTATTTAGGTA  53 57
MTP40_RS04870 1024297 .. 1024325 +   -14  -4.46656   CACCAGCTCCAAAAA        GACCTCAAAACG GAAAA CGTTTTGGGGTC        TTTTGCTGTTATAGG 100 30
MTP40_RS04875 1024575 .. 1024608 + -12.5  -5.17786   ACCAAACAAGAAAAA     TCCGAACCTATTTCC GATT GGAGAAGGGTTCGGA      TTTTTCGTTTTCTTC 100 37
MTP40_RS04880 1025027 .. 1025062 + -11.1  -4.91109   AGATACATCTATATA    AGGCAGGGCGTTCCC TTTACT GGGAGCGTCCTGCTG     TTTTTATGCTGCAAC 100 85
MTP40_RS04895 NONE
MTP40_RS04900 NONE
MTP40_RS04905 NONE
MTP40_RS04910 1028685 .. 1028695 +    -4  -3.24022   AAAGAAAAATCGTGA                 TTGT GCT ACAA                 GTTTTCTGGAAATTT  48 45
MTP40_RS04915 1029305 .. 1029316 +  -2.2  -3.65351   TTCTCAAACCAGAAA                GCTA AAGA TGGC                 TTTCAATCGAGGTAA  50 21
MTP40_RS04920 1030434 .. 1030444 +  -2.6  -3.14564   TGTGCAGCTATACGA                 TTTT GAA AAAA                 TTCGTAGGCGGCTGA  45 49
MTP40_RS04925 1030808 .. 1030831 +  -2.6  -2.69468   TGGTATGAAGTAAAG          TTTTAGATGTC GGA GA-ATCTGAAA          TCATGTATGACAATA  41 49
MTP40_RS04930 NONE
MTP40_RS04935 NONE
MTP40_RS04940 1033889 .. 1033903 +  -2.8  -3.33671   AACAGGGTGGATATT               TTGATC TTT GAACAA               TTCTGCAATAAATAT  47 75
MTP40_RS04945 NONE
MTP40_RS04950 NONE
MTP40_RS04955 1036384 .. 1036434 + -11.2  -4.82901   AACGGTTTCGATTGA AATCGGGGGTGTCACTGGCCCGCC TGCAT GGCGAGC-GGTG-CACCCCTGATC TTTTTGTCGGAACAA 100 242
MTP40_RS04970 1037830 .. 1037867 + -20.7  -4.55295   CGCAAATACAAAAAG   TAGGAGAGCGGTGCAGG GAGG CCTGTGCCGCTCTCCTG    TTTATTTGTGCCGGA 100 23
MTP40_RS04990 1041046 .. 1041073 +   -12   -5.0133   GGCAAGAGGCGCCAT        TAGGCGGCGAGG GCAA CTTCGCCGCTTG         TTTTTTAACCGGATG 100 27
MTP40_RS04995 1043882 .. 1043897 +    -9  -3.08642   CCTATTAAGTTGCAG              CCGAGT GCGC ACTCGG               TTACATAAATGATCT  66 33
MTP40_RS05000 1044475 .. 1044514 + -25.2   -5.1485   ACAACAATGCCTCGT  TATGGTGTGCCAGGAGGC GTGT GCCTCCTGGCACACCTTA   TTTTTATGTTGCTTA 100 108
MTP40_RS05005 NONE
MTP40_RS05010 NONE
MTP40_RS05015 1046939 .. 1046949 +  -2.4  -2.75074   TGACTATGTGATGGA                 GGCC CTG GGCG                 TGCTGTTCCGCTAAG  40 1
MTP40_RS05020 1048519 .. 1048552 + -16.9  -3.21276   TATAACTGTGCGTAA     TAAAACCTCCCGCTC ATTC GAGTGGGAGGTTTTG      TGTTATAACAAGGGC 100 42
MTP40_RS05030 NONE
MTP40_RS05035 1050631 .. 1050653 + -11.2  -3.26471   GGTCGCTCATCCTGA           CGGCGGCTAC AGT GGAGCTGCCG           TTGGTGTAGACCTCG  71 475
        ybaK 1054079 .. 1054102 +  -8.8  -6.34616   TACGCAGAAATAAAG          GCCGTGGTGC AGGT GTACCACAGC           TTTTTTTTGTTTTGC 100 432
        purE NONE
        purF NONE
        purM NONE
        purN 1057834 .. 1057871 +  -2.5  -3.09516   GAGGCTTGAGGCTCC   CTCTCCGAGGGGGCTGT CGCC GCAGGCGACTGGGGGAG    TTCCGTAATAGGAGA  42 88
MTP40_RS05080 NONE
MTP40_RS05085 1059948 .. 1059966 +   -16  -2.72511   CTGTCGGCTTTGCCA             GCTCCCCC AAA GGGGGAGC             CTTTGGCAGCATCCC 100 73
        purD NONE
MTP40_RS05095 1065179 .. 1065196 +  -4.7  -3.01924   ACCTCCCTCTCCGAG             GGAGGCT GAAA GGCCCCC              TCTTCGAGGGGGCTG  49 87
        purB 1066842 .. 1066871 + -17.1  -3.83026   ACTGCAAAATCTATC       GCTGCGCTCCGCC TTTG GGCAGGGCGCAGC        TTTGCTATAACCGGA 100 164
MTP40_RS05105 1067715 .. 1067748 +  -4.7  -3.07013   ACCCCCGAAAGATAA     TTTCACCAAGAAAGT CAAA AATATTTTGGTGAAA      TATGTTGCAAAAGTA  49 134
MTP40_RS05110 1068983 .. 1069016 +   -14  -4.98531   AAAGCCGTCGGCGCA    GAACCGGCC-GC-TCG AAAC CGATGCTGGCCGGTTC     TTTTTGGTTTGGAGA 100 58
        ftsE NONE
MTP40_RS05120 NONE
MTP40_RS05125 1072121 .. 1072138 +  -7.7  -3.45023   GGATCTTTGCACTTT             CCATGCT GGGC AGCGTGG              TTATGATGCTGCTGG  66 129
MTP40_RS05130 1073598 .. 1073616 + -10.2  -3.06737   GCTGACGCGCTGCCA             CCTCTCCC GAA GGGCGAGG             TCTTGGCAATTCATG  72 63
        rsmA 1074608 .. 1074644 + -12.9  -4.16943   AATTCGGTTTTCCAA    AAGCAGGGGCTCTTCGC AAA GCGTGGAGCGCCTGCTC    TTTTAGAATATAAAG 100 52
MTP40_RS05140 NONE
MTP40_RS05145 1078065 .. 1078083 +  -5.2  -3.04398   AAAGGAGGAGGCTCG             CTGATGGC TAA GGCATCGG             ATTTTGAGGGCAAGA  51 22
MTP40_RS05150 NONE
MTP40_RS05155 NONE
MTP40_RS05160 1081055 .. 1081089 + -25.1  -4.50976   ATTTTAACACAATGA    CCCCGCCGCGCTGGGA GTTT TCCC-GCGCGGCGGGG     TTTTGTGCTGTCAGG 100 59
MTP40_RS05170 NONE
MTP40_RS05175 1086581 .. 1086611 +  -8.2  -2.73124   GGGAACGGATTAAAC       CTCTCCGTCATTGC TTG GCAAAGAGGGCGAG       CTTTACGAAATGCCA  61 28
MTP40_RS05180 1087702 .. 1087716 +  -2.8  -4.56607   CACAACGATCTGCCG               GAAAGG AAG CGTTTC               TTTTATGGTTCCTGC  65 115
MTP40_RS05185 NONE
MTP40_RS05190 NONE
MTP40_RS05195 1090477 .. 1090516 + -11.6   -5.4505   GTCATGTGTTGGCTT  GAGACTTTTGTCACAGACA GAG TG-CTGTGGCAGGGGTCTC  TTTTTTCTTGCCCGG 100 188
MTP40_RS05200 NONE
MTP40_RS05205 1091841 .. 1091870 + -12.2  -4.96646   GAAATAAAAGAAAAA       GGCGATGCAGCT GTTCAA AACTGCATCGCC        TTTTTGCTTGTGTAA 100 34
        acpP 1094631 .. 1094674 + -11.4  -4.35116   CAGCTTTGCAAAAAG GCCCCGCACCCGCAGCGCTG CACA CGGCGGCGCTGCAGCGGGGC TTTTAATATGAGCTC  93 44
        proS 1096223 .. 1096250 + -18.6  -5.76633   ATCCGATGAAAAAAG        CAGCTTTCCCGT TCAA ACGGGAAAGCTG         TTTTTTTGTATCTGC 100 63
MTP40_RS05230 NONE
MTP40_RS05235 NONE
MTP40_RS05240 1098418 .. 1098454 +    -3  -5.24129   ACTGCATGCCCTTTG   TACACCGCAGGAGT-TG TAAC CAGACCGATGCGGTGTA    TTTTTTATGCCCGGA  77 249
        mgtE 1100060 .. 1100072 +  -9.1  -3.05463   TTCTGTATCCAATAC                CGCTG TGT CAGCG                TTCCATCGGAGGAAT  66 212
MTP40_RS05285 NONE
MTP40_RS05290 1110835 .. 1110853 +  -8.8  -3.83026   CCGCAGGCAGTAGGG             CGGGCGAT GGA ATGGCCCG             TTTCGTGTCCGAGGA  73 110
         dut NONE
MTP40_RS05300 1112092 .. 1112104 +  -3.4   -2.7458   ATAGACCGGAAATAC                GAAG GAGAG CTTC                ATTATGAGTTTTTTG  42 194
MTP40_RS05305 1113143 .. 1113173 +   -19  -4.13767   TAACGATGTAACAGA       GGGTGCGGACGGCT CTG GGCTGTCCGCGCCC       TTTTGCAATCGGAGG 100 38
MTP40_RS05310 NONE
        mreD 1114555 .. 1114565 +  -2.4  -2.62184   CGAAGAATTTAAGAT                 CGAC AAC GGCG                 TGGTGTAACGCACCC  39 7
MTP40_RS05320 NONE
        mgsA 1117415 .. 1117452 + -20.7  -5.09895   TGGAATAAAACACAA   GCCCCCGCATGTTGG CCGGAAAA CCAACGTGCGGGGGC    TTTTTTGCATCCCTG 100 45
MTP40_RS05350 NONE
MTP40_RS05355 NONE
MTP40_RS05360 1125057 .. 1125092 + -21.3  -5.40072   CGCATCGCCAAAAGT    GCAAGCCCGGAAGGT CTGTGT GCCTTCCGGGCTTGC     TTTTTTTCGGGAAAA 100 62
MTP40_RS05365 1125758 .. 1125810 +  -9.1  -5.76633   GTAAAAAAGGAAAAA CATCTGCTGTCCC-ACACCGGAGG CTGTCA CGTCCGGCAAAGGGGCAGCAGATG TTTTTTTGTGTGTAA 100 54
MTP40_RS05380 1127675 .. 1127685 +  -6.8  -3.52896   GTATCAGACGATCAC                 GGCA TGC TGCC                 TTCTGTGAGTGCTAA  61 262
MTP40_RS05385 1128135 .. 1128170 + -11.2  -5.09225   GGATGGCTGAATCAA    TCCCTGCAGGTGAAAC ACAG GTTTTCCCTGTGGGGA     TTTTTTGAATCCGCT 100 31
MTP40_RS05390 NONE
MTP40_RS05395 1129323 .. 1129337 +  -7.2  -3.35046   AGGTGTGAGAGATGG               GCTTTT TCA AAAAGC               TGTTTACAGGGATCG  62 48
MTP40_RS05400 NONE
        sfsA NONE
MTP40_RS05410 1131034 .. 1131060 + -10.9  -5.86061   TACAATCAATGCAAA         CGGGGAGTGAT TTGAT GTCACTCCCTG         TTTTTTTTGATGAGA 100 41
MTP40_RS05415 NONE
MTP40_RS05420 NONE
MTP40_RS05425 NONE
MTP40_RS05430 1134062 .. 1134076 +  -7.8  -4.09685   ATGGGAATGCGCTCA               TCGGCG CGG CGCTGA               TTTTCACAGGTGACG  71 520
MTP40_RS05440 1135646 .. 1135704 +  -2.5   -3.1811   GCCCGTTGACCTTTT GCCTGCCG-GTTTGTGGTATCCT-TCTGT CAG AAAGACAGAACACCACAAAAACGGAGGGC ATTTATTATGAAAAA  43 51
MTP40_RS14430 NONE
MTP40_RS05445 1136426 .. 1136474 + -19.1  -4.72986   AAGACATTCGGAGAA CCAAGGAGCAGATACAACACA CTCGTGA TGTGAAGTATCTGCTCCTTGG TTTTTAATAAGACTC 100 39
MTP40_RS05450 NONE
MTP40_RS05455 1138047 .. 1138065 +  -3.2  -5.00616   TCCCTGGAAAGCCCT             TCTGAA TGGACGC TTCAGA             TTTTTTGCCCCGACC  73 180
MTP40_RS05460 1138613 .. 1138648 +   -22  -5.31519   CACACGCACATAAGA    TGCCCCCGGAGAGC CGCAACAA GCTCTCCGGGGGCA     TTTTTGTTTCGCTAT 100 66
MTP40_RS05465 NONE
MTP40_RS05470 1140811 .. 1140846 + -20.5   -5.1356   CACACGCACATAAGG    TGGCCCCGGAGAGCT GTAACA AGCCCTCCGGGGCCA     TTTTTGTTCCTGGCA 100 58
         ade NONE
MTP40_RS05480 NONE
MTP40_RS05485 NONE
MTP40_RS05490 1143849 .. 1143869 +  -5.3  -3.04517   GCCGATGGAGATGTG            ATTCGTGGC TGT GCCACGGGA            ATTTTGACGGAAAGT  51 25
MTP40_RS05495 1145163 .. 1145175 +  -2.7  -3.40403   TGTCGGTGGAGCGTC                TGATG TCC TATCA                TTGTAATGAGGCGAA  47 7
MTP40_RS05500 1148379 .. 1148391 +  -3.4  -2.64726   CGGTTAAAAGGAGAA                CGTT ATGAA AACG                ATTCGTGTTGTGGCC  42 34
MTP40_RS05505 1148922 .. 1148963 + -21.1  -4.37247   AAATCGTAAAACAGA GGCCTCCGAATCTTTTCCT AATA AGAAAGAGATTCGGAGGCC  TTTATTGGTTGATTT 100 109
MTP40_RS05525 1152078 .. 1152109 + -14.6  -4.76644   CTAACAAAAAGATAA      GCCGATTGGAAATG TTGC TGTTTCCAATCGGC       TTTTTCATGCGTGTT 100 37
MTP40_RS05555 1156607 .. 1156637 + -10.4  -4.20516   TTACCTCCTGAACAA       CAGCCGTCGTGG TATCCGT CTGCGGCGGCTG       TTTCTTACATAAAAA  85 51
MTP40_RS05560 NONE
MTP40_RS05565 1157482 .. 1157492 +  -5.4  -3.02121   TAAAATCATTGATTG                 TTGG CGG CCAA                 TATGGTATTCTTTTT  51 160
MTP40_RS05570 1158208 .. 1158227 +  -2.2  -3.09327   AGAGCAGCAGAAAAA            GCTTTT TGAAAAGT AAAAGC             TCTTGCGTCCCGTGA  42 173
MTP40_RS05575 1159427 .. 1159466 + -10.7  -4.98531   GATTCCATAACGAAA  GCCCGTCTGCGCTGCCAC ATATC GTGGCT-TGCAGACGAGC  TTTTTCGTTTGGCCG 100 75
MTP40_RS05585 1160518 .. 1160558 +  -3.2  -4.12942   TTCAAGAATCACCGG GAGAATAAAGGGTGCCGCC TGCG GGCGGCGTACAT-ATCCTC  TTTTAGCAGCTTTGC  58 18
MTP40_RS05600 1164104 .. 1164138 + -16.6  -5.62045   TACGCAGTTCCTACA     GAGTGACAGCGTTTCA GCT TGAAATGCTGCCACTC     TTTTTTGTTGTCTAT 100 52
MTP40_RS05605 NONE
MTP40_RS05610 NONE
MTP40_RS05615 1166625 .. 1166639 +  -2.1  -2.81471   AGCACTTGACCCTGA               CGTTA CGTCA TAGCG               TATACTGAGCTTGTC  40 95
MTP40_RS05620 1167472 .. 1167509 + -15.6  -4.16943   GCTGTAAGAAATAAA   CGGGCTCCTGCCAGTG GTTAAA CGCTTGCAGGAGCCTG    TTTTGGCGTGTAGCC 100 99
MTP40_RS05630 NONE
MTP40_RS05635 1169035 .. 1169045 +  -2.4  -3.28712   TTTGCCTTTCGGTTT                 GTGG TAT CCTC                 TTGTCAGAAAGACGA  45 63
MTP40_RS05640 1169957 .. 1170007 +  -9.7  -4.84492   ACCGGAAGAACAGCA AAACACCCGCCTGCGTATTGTGT GCAAA GCACAGTACATGGGCGGGTGTGG TTTTGTTGTGGTTCG 100 92
MTP40_RS05670 1177999 .. 1178012 +  -2.4  -2.77166   AGGCGTAAGCGCACA               CCTT GCCGCA AAGG                GCTTTTTTGGCGTGC  40 33
MTP40_RS05675 NONE
MTP40_RS05680 NONE
MTP40_RS05685 NONE
MTP40_RS05690 1180599 .. 1180610 +  -2.2  -5.37345   TCGTCTCATAAGCCC                CGTT TTTA AGCG                 TTTTTTGTGCTTCAG  79 104
MTP40_RS05695 NONE
MTP40_RS05700 1181681 .. 1181693 +  -6.2  -2.52933   GTTATTGGGAAAACA                CGCC TAAGT GGCG                ATTGATAGCTTACAG  50 8
MTP40_RS05710 1182329 .. 1182355 + -13.8  -4.80729   GAAGGCGAATAAAAA         GGGTCCATCC CGCAGTT GGATGGACCC         TTTTGTGTTATATTT 100 29
MTP40_RS05720 1184548 .. 1184560 +  -3.3  -5.00884   TAAATAGAAAGAGGG                GGGCG TTA TGTCC                TTTTTTGAAAACACT  75 265
MTP40_RS05725 NONE
MTP40_RS05730 NONE
MTP40_RS05735 NONE
MTP40_RS05755 1191173 .. 1191212 + -10.7  -5.63517   GACTCCATAACGAAA  GCCCGTCTGCGCTGCCAC ATATC GTGGCT-TGCAGACGAGC  TTTTTTGTTTGACCG 100 86
MTP40_RS05760 1192174 .. 1192204 + -14.8  -4.87665   ATCAAACCATCCCTT       CAGCGGACAGCC TCAAAAT GGTTGTCCGCTG       TTTTTATGCCTGGAC 100 70
MTP40_RS05770 1193898 .. 1193914 +  -9.4  -3.39803   GCATCACGCTGGAAG              CGCCGT CTGCT ACGGCG              TTGTAGATGTCGCTG  67 164
MTP40_RS05780 1195590 .. 1195625 + -24.9  -5.34309   CACACGCACATAAAG    TGGCCCCGGAGAGCT GCAACA AGCTCTCCGGGGCCA     TTTTTGTTTCCTGGT 100 66
MTP40_RS05785 1195943 .. 1195955 +  -5.5  -3.55444   GAAGAAAACTGAGAT                CGTGG GTT CCATG                TTTGCCAAGTGCGAG  56 57
MTP40_RS05790 1196261 .. 1196299 + -19.1  -5.00616   TTTATAACCCCCAAA  GGGAGTTCTGTT-CGGAC GTTC GTCCGTAACGGAACTCCC   TTTTTTGAAAGACAC 100 124
MTP40_RS05795 NONE
MTP40_RS05800 NONE
MTP40_RS05805 NONE
         lgt 1200983 .. 1200997 +  -4.9  -2.64155   GTGGGCACCGGAAAC               GGCCC CGTGA GGGTC               TGCCTTTACGACCAG  46 100
        rplU NONE
        rpmA 1201645 .. 1201669 + -12.8  -4.65895   AAACTGCAACCCGAA          GAGCCGGACC CTCGT GGCCCGGCTC          TTTTTAGGTAACGAA 100 53
        obgE NONE
MTP40_RS05830 1203667 .. 1203721 + -25.4  -3.37028   CCAGAAATAAAACGC GAAAGCCCGCTG-CTTTCC-GCACTG GAAAA CAGTGCAGGGAAGGCAGCGGGCTTTC TTATGCGGTGTTACT 100 31
MTP40_RS05840 1205523 .. 1205539 +  -7.9  -4.07687   TGCGGCTGCTGTAAA              CCGGCCT GAA AAGCCGG              TTTTCCAACACGAAT  73 27
MTP40_RS05845 1206479 .. 1206515 +  -7.9  -5.37593   TAATAGAAAATCAAA   GCGCTGCCCCCCTGTG AAAAAA CTCAGAG-GGCGGCGC    TTTTTTGCTTTGCCG  95 66
MTP40_RS05850 1208329 .. 1208354 + -17.6  -5.14563   ACGGATTGACGCAAA         GCGGCCTGCC GGAGAG GGCAGGCCGC          TTTTTTGATGAGAAC 100 32
MTP40_RS05855 NONE
MTP40_RS05860 1209027 .. 1209063 +  -4.6  -3.66398   AGAGAGAAGATTGAC  GCAA-AGCAGC-CTGCC GGATAA GGCAGAGC-GCTGTTGC   TGTTTCTGTGTGGGT  57 27
MTP40_RS05870 1211897 .. 1211941 + -23.1   -3.9392   CCCCAAGAAAATAAC GCAGAAAGCCCCATCGGTA CGAAAAA TACCGATGGGGCTTTCCGC TTGTTTAGGATAGGA 100 178
MTP40_RS05920 1228318 .. 1228328 +  -2.4  -3.56643   ATTATGGCAGAACAG                 GCGC ATG GGGC                 TTTGGACCCTGTGGC  47 57
MTP40_RS05925 NONE
MTP40_RS05930 NONE
MTP40_RS05935 1232095 .. 1232127 + -19.2  -4.57353   AGAGAGAACCGGAAT      GCGGCGCTCTCCCT GAAGA AGGGAGGGCGCTGC      TTTTGTCTGCTGAAG 100 40
MTP40_RS05940 1232545 .. 1232561 +  -3.6  -3.65314   GTGGGCACCGTCTAC              CTGGGC ATGAA GTCCGG              TTCTTAAAAATTAGC  53 2
MTP40_RS05945 1232706 .. 1232730 + -12.2  -5.48213   CTCCATGCAGAAAAG          GCGCTGATTC GTTCA GAATCGGCGC          TTTTTATTTTGCCTG 100 36
MTP40_RS05955 1233467 .. 1233490 +   -11  -5.14563   AAAGTGAACCTCAAA          GCAGATGGCC TGCG GGCTGTCTGC           TTTTTTGATGGGGAG 100 34
        pyrH NONE
         frr 1235003 .. 1235032 + -13.6  -4.56597   AACGAAACGTGTGAG       GTGCCGTGCGCT GGAACG AGTGCGCGGCAC        TTTTTGCCGAAACCG 100 53
        uppS NONE
MTP40_RS05975 NONE
         dxr NONE
MTP40_RS05985 NONE
        ispG 1240197 .. 1240240 +  -8.3  -3.24422   GTCATCTTCGCTAAC GCTCGATGCC-A--CCTCCCCT AGT AGGGGAGGCCTTGGCATAGGGC TCATTTTTCGCAATG  64 138
MTP40_RS05995 1244909 .. 1244933 + -12.9  -4.79756   TGCAAAAAAAAAAAA          TCCCCTGCC AATATCC GGCAGGGGA          TTTTTGAGTTGTGTG 100 92
MTP40_RS06005 1249460 .. 1249490 +   -14  -3.37612   TGAGTATAACGAGAA       CCCCCTCCGGTATG GTG TGTACCGAAGGGGG       TTCGTTGGGGTTGGA  93 116
MTP40_RS06015 NONE
MTP40_RS06020 1252885 .. 1252913 + -20.4  -4.86621   GAACCGCAAAACAAA        CCCCCTGTGCCA GACCA TGGCACAGGGGG        TTTTTGATTGCACAT 100 62
MTP40_RS06025 1253251 .. 1253289 +  -4.7  -4.74103   GATAAAAGCAAAAAA  GATTGACCGCCCCCAGTCT CAC AAACTCGG--CGGTCAATC  TTTTTGACTTAAAAG  73 20
MTP40_RS06035 1256997 .. 1257035 + -18.2  -3.70446   GATAATCTGACAAAA   AAGCATCCGGTCTCTTGC AAT GCAGGGGGCCGGATGCTA   TTATATTCCCTGTAA 100 133
MTP40_RS06040 NONE
MTP40_RS06045 NONE
        thrB NONE
MTP40_RS06055 1261022 .. 1261044 +  -5.5  -4.07568   TAGTAGTGGGGCCCT           TGGCATGGC GTAAA GCTTTGCCA           TTTTGCCAAGGCCGC  64 102
MTP40_RS06060 1263497 .. 1263517 +  -4.6  -3.34398   AATAGTGGGGCCCTT            GGCATGGC GTAAA GCTCTGCC            TCTTTGCCAAGGCCG  52 95
MTP40_RS06065 1264790 .. 1264806 +  -2.1  -4.57057   AAAGAGGGCAGGTTC              CGCCCCT TGC AGGAACG              TTGTTTTTGTAGTAT  63 205
MTP40_RS06070 1265134 .. 1265154 + -14.7  -5.21709   ATCAACGCAGAGAAA            GCGTCGTGC ATT GCACGGCGC            TTTTTTGCTGTGCAG 100 43
MTP40_RS06075 1267912 .. 1267932 +  -3.9  -4.56597   AATAGTGGGGCCCTT            GGCATGG CGTAAAA CCCTGCC            TTTTTGCCAAGGCCG  68 75
MTP40_RS06080 1269489 .. 1269503 +  -4.9  -2.65766   CGTATGAGCGGTTTG               TGGCG AAACA CGCCG               TGGTATAAAATTTAC  46 3
MTP40_RS06085 1270431 .. 1270483 + -17.2  -2.66538   CAGGTTGAAACAGGA GAAAAAGCGCCCGGGTATCGCA ACGAAAAAA TACGATATCCGGGCGCTTTTGC GTTGTCATAAATTCT 100 33
MTP40_RS06090 NONE
        groL 1272749 .. 1272776 + -17.8   -5.4251   TATAGGGTAACAAAA        TCGGCACTCGCT GAAA AGCGGGTGCCGA         TTTTTTGTGTCTAGG 100 138
MTP40_RS06110 NONE
MTP40_RS06115 1280208 .. 1280237 + -16.5  -5.34555   GGCATAAAACCAAAG       GCGGCTGTCTGCA TGGG TGCAGATGGCCGC        TTTTTTGTGCTATAC 100 53
MTP40_RS06120 NONE
MTP40_RS06125 1283846 .. 1283860 + -11.4  -3.55563   TTGCAAAGCAATGAA               GTCCCC GGT GGGGAC               TTTAAGCGATGAAAT  83 270
MTP40_RS06130 1284106 .. 1284116 +  -3.2  -4.69326   ATTCTATTTGAGAAT                 GATG CAA CGTC                 TTTTCTATTCGATAT  69 30
MTP40_RS06135 1285611 .. 1285646 + -18.4   -5.4505   ATTCAATACGCCGCA    GAAGGCAGAACTTCCC ACCC GGGAGGCTCTGCCTTC     TTTTTTGTTGACACC 100 274
MTP40_RS06140 1286652 .. 1286680 +  -2.5  -2.77523   CTGTGCCGCTGGAGA       GTGCGGA-ATGA GCGCCG TCATCTTCGCGC        TGCTATTGGTGGCCA  40 15
MTP40_RS06145 NONE
MTP40_RS06150 1288989 .. 1289027 + -13.9  -4.34402   TCCTGAACGCATCAA   TGCCCCCTTTCCTGC CCATCCTAA GCGGGAGAGGGGGCG   TTTTCATGTCCGGCA 100 35
MTP40_RS06155 NONE
        secG 1290985 .. 1291007 + -12.7  -5.03994   CTGAGCACCCGTGTA           CAGCCCCGT GTAAG GCGGGGCTG           TTTTTCTGTCTGCAA 100 37
         rnr 1293225 .. 1293252 + -14.2  -5.80364   GATAAAGAAACGCAA        GCGTTCACCTTC CCTG GAGGGTGAGCGC         TTTTTTTGTTGGACT 100 43
MTP40_RS06170 1295419 .. 1295462 + -16.8  -4.86033   CCTCTTTTCTGAATG CGGCAAAGCCCTGCA-CCCTT TCC ATGGGATGCGGGGCTTTGCCC TTTTTCTCGGAATTT 100 74
MTP40_RS06175 1297484 .. 1297526 + -17.8  -4.84017   GGTAAATTAAGGATA CGACCCTCTCTGTCAAAGCC TGC GGCGTTGACGGAGAGGGTTA TTTTTATGCAGCATT 100 36
MTP40_RS06180 1300111 .. 1300148 + -18.7  -3.07198   GATTACCGTTAACGA   AAAAAGAGCGATACAGC GTTT GCTGTATCGCTCTTTTG    CTTTCTCTATGAACA 100 39
MTP40_RS06190 NONE
        scfA 1301095 .. 1301115 + -10.4  -5.71712   TTTCTGCAAATCGGA            TGCCGCCT TTGCC GGGCGGCA            TTTTTTTATGTAACA 100 41
        scfB NONE
MTP40_RS06205 NONE
MTP40_RS06210 1305361 .. 1305399 + -25.4  -4.60041   AATCCAGAAAAAGCA   GCAGCGCCCTGTCTCCCG CAA TGGGAAACAGGGCGCTGC   TTTTTGCGCATCCGT 100 56
MTP40_RS06245 NONE
MTP40_RS06250 NONE
        scpB NONE
MTP40_RS06260 1313487 .. 1313506 +   -15  -2.62983   GGGAAGTGGTTCCGT            GGGAGCGG CGTT CCGCTCCC             TGATATAGAAGTAAG  90 94
        ytfJ 1313964 .. 1313984 +  -8.3   -5.0133   AACACACCGCCGTAA            CTGCAAGAT TCC AACTTGCAG            TTTTTTCAGCGCATG  93 57
MTP40_RS06270 1314953 .. 1314966 +  -5.2  -3.30771   ATTTTTCCGCAAAAT               GGGC CTTTCA GCCC                TTGTGAACGCTCTCA  54 97
MTP40_RS06275 NONE
MTP40_RS06280 NONE
MTP40_RS06285 1318260 .. 1318297 + -24.3  -5.40014   TAAATCATAATACCA   GAAGGGGCTGCTGCACC GTTT GATGCAGCAGCCCCTTC    TTTTTGTTATTGTTT 100 38
MTP40_RS06300 NONE
MTP40_RS06305 NONE
         gmk NONE
        priA NONE
         def NONE
         fmt NONE
        rsmB 1326850 .. 1326869 +  -4.2  -3.27029   ATGCAGAAAACCCAA            TGAACCCG CCGT CCGGTTCG             TATTGATTCATAGGA  50 23
        rlmN NONE
MTP40_RS06340 NONE
        pknB NONE
        rsgA NONE
MTP40_RS06355 1332247 .. 1332272 + -15.5  -5.24531   AAAGGATAAGAAAAA         TACCGGGGCAG GCGG CTGCTCCGGTA          TTTTTTGTGGCACAT 100 173
        murD NONE
MTP40_RS06370 1336280 .. 1336298 +  -8.8  -3.83026   CCGCAGGCAATAGGG             CGGGCGAT GGA ATGGCCCG             TTTCGTGTCCGAGGA  73 90
MTP40_RS06375 1337628 .. 1337638 +    -4  -3.63744   TGCAGAATGCTTATT                 TCAA GGA TTGA                 TCTTTTCAGAAAGAA  55 15
MTP40_RS06380 1339004 .. 1339034 + -18.4  -3.07013   ATAAGATGCTATAAA       GAAATCCCCTCGTC ATA GGCGGGGGGATTTC       TCTGTTAAGCGGGTA 100 47
MTP40_RS06390 1341431 .. 1341464 + -12.5  -5.34555   CGTTAATCCTCAAAG     CACCCACTTCTTAAG GAAA CTTAAGCCGTGGGTG      TTTTTTCTGCTCTGA 100 64
MTP40_RS06395 1343750 .. 1343787 + -20.7  -4.36595   AACCGCATAAAAATG   CAGCGCCGCTGAAGC CCTGAAAA GCTTCGGCGGCGCTG    TTTTACGTTTCCCTC 100 67
MTP40_RS06420 1348431 .. 1348459 + -19.7  -5.24799   ATTTTATCAATCCGG        GCACCGTGATGGG TTT TCCATCACGGTGC        TTTTTCTGTTTATGG 100 45
MTP40_RS06425 NONE
MTP40_RS06430 1351883 .. 1351938 + -16.3  -3.90586   TATCTGCCCTGAAAG C-CGAAGCTCCCCCTTCCCCAAGCGCCG AGA CAGCGCC-GGG-AAGGGGGAGCTTTGCG TTTCTCGGCTGCTCT 100 76
        coaD 1355558 .. 1355577 +  -2.2  -4.20516   TGCAAGAAACGCTTC            GGC-GTTTT GAT AAAACAGTC            TTTCTTAAATCACAA  57 54
MTP40_RS06450 1356861 .. 1356910 + -16.4  -4.08767   AATTGAATTGAATGA CAGC-CC-GCGCCCCGGCTCAGAC CGGA GACTCTGCCGGGGCGCGGGAGCTG TTTTGAAACACTGAG 100 54
MTP40_RS06455 NONE
MTP40_RS06460 1358660 .. 1358694 + -12.2  -4.41348   AATTTCTGATAAACA     TTTCTCCCGGCCGT GGGGAAA GCGGTCGGGAGGAA     TTTGTTTGCAACCGG  95 39
MTP40_RS06465 NONE
MTP40_RS06470 NONE
MTP40_RS06475 1361899 .. 1361930 + -21.6  -4.70659   CCTGATTGTGATAAG      GCCGCCGCGCAGTG GAAA CGCTGTGCGGCGGC       TTTTTGCGTCTCCGG 100 61
MTP40_RS06480 1363542 .. 1363554 +  -3.3  -2.59222   GTGCCGGGAGCAGGG                GGCTG ATC CATCC                GATTTTGTACTTCAT  42 20
MTP40_RS06485 1365390 .. 1365437 +  -4.6  -4.10863   ACTTCCGACAACGGT GTCCGGGCCATC-TGCGGCCCGG GCT CCCAGCCGGAAGATCGCCCGCTC TGTTTCTTTTTGTGT  64 306
MTP40_RS06495 NONE
MTP40_RS06500 NONE
MTP40_RS06505 NONE
        yqeC NONE
        selD NONE
        yedF 1371877 .. 1371891 +  -2.1  -2.56596   GAACGCCGGGAACGT               GGTCA AGCCG TGATC               TACCTTGATAACGCC  39 13
MTP40_RS06525 NONE
MTP40_RS06530 1373270 .. 1373285 +  -3.2  -5.09225   AAATAAAGGAGAATT              GGATGG GAAA CCGTTC               TTTTTTCAATGCACT  75 42
MTP40_RS06535 NONE
        yqeB 1375125 .. 1375157 +   -15  -4.31293   GTGCTGGAACTAAAA      GAAACGGGACTGTT TTTGC AACAGCCCCGTTTC      TTTGTTACTCTGTCA 100 28
MTP40_RS06555 NONE
        prfA 1378287 .. 1378301 +  -5.8  -2.74144   TGTTGATTTGATGAT               TGAAAA GTA TTTTCA               CTTTACAGATAGAAA  51 69
MTP40_RS06565 NONE
        coaE 1379977 .. 1379987 +    -4  -4.57073   GGCGCGGACACTTCG                 CTTT GAA AAAG                 TTTTTGAAAACGCTG  68 20
MTP40_RS06575 1380565 .. 1380578 +  -9.5    -3.695   GCAAACCCGCTTGAA               CCGGC TTGC GCCGG                TTTGAAATATTTAGG  76 48
MTP40_RS06580 1382043 .. 1382073 + -16.1  -4.69464   GCGATCCAGAATGAA       TGCCCCGGCAGGT TTTGC GCCCGCCGGGGCA       TTTTTGCGCTATTTT 100 43
MTP40_RS06585 1383466 .. 1383502 +  -2.8  -4.93365   GCAGCGCGATCTGGT   GGCCTGCCGC-CGCCGC ATCC GCAATGAGCGGCAGGTA    TTTTTCATTGTAGCC  76 496
MTP40_RS06595 1384076 .. 1384118 + -20.9  -3.65084   CTTCTCCTGCATACA CAAAACGGCAGGCCCTTGGAT AGA ATCC--GGGCCTGCCGTTTTG TTTGCGGCTTTGGTT 100 30
      spoIVB NONE
       spo0A 1386699 .. 1386741 + -10.7  -5.31275   TGATAGGGCGATAAA TCTCCGGAATTTATTGGGT GTGGA GCCGAATGGATTCCGGAGG TTTTTTGTGGTGGAA 100 158
MTP40_RS06615 1387637 .. 1387654 +  -4.9   -3.0497   ATCAAAAGGAGGAAT             GCAAGATG ATC CATCT-GC             TGTTAGCGGTGATCT  49 133
MTP40_RS06620 1388817 .. 1388860 + -15.7  -4.99638   AGCGGCGCAATAAAA TACCGCTGCTC-T-TGCATTT GGGG AAATGCACAAGAGCAGCGGTA TTTTTGTATGCATAT 100 28
        rpmE 1390792 .. 1390815 +   -16  -5.68489   TACTGGTCTTTTCAG          CGCCGTCTCC TTTG GGAGGCGGCG           TTTTTTGTTGTTATG 100 42
MTP40_RS06640 NONE
MTP40_RS06645 NONE
MTP40_RS06650 1395013 .. 1395047 + -13.6  -5.40072   AATAAAACGTTTCAC     TCCCGCACTGTGCGAA TTC TTGGTACAGCGCGGGA     TTTTTTTGCGCCGGA 100 36
MTP40_RS06655 NONE
MTP40_RS06660 NONE
MTP40_RS06665 1397972 .. 1397990 +  -4.6  -3.29273   CTGAGAGGGGAGGAC             GTAAAATG AAA CGTTTTGC             TGTTCTGCTGCTGAC  52 17
MTP40_RS06670 1399215 .. 1399271 +   -13  -4.07568   TCAGTATTGAGAAGA AAGGGCCCTCTCCGTCAAAGCCTC TGGCAATGC GAAGCAATGACGGAGAGGGTCCTC TTTTGGAAAGGAAAC 100 31
MTP40_RS06675 1400229 .. 1400283 + -20.3  -4.03234   CAGGCGGTATCTCGC TTCGTGTGCAAAAAAGTCCGT-CCGG TTTT CCGGTGCGGACTTTTTTGCACTCTAA TTTGTGTCAGAAAAC 100 246
MTP40_RS06680 1402045 .. 1402075 + -22.6  -4.11216   CTGAACAGGCTTGCA       GGGCCGCTCCCGGA GCT TTCGGGGGCGGCCC       TTTTGGCAGTACCGA 100 43
MTP40_RS06685 1403967 .. 1403985 +    -3  -4.03413   GAATGTCCAGAGCAG             CAGGGCTT TGT AAGCCGGG             TTTCTATGCGCCACT  56 178
MTP40_RS06690 1404086 .. 1404111 + -15.5  -5.30189   CGGTGGCATAAAAAA         TCCCCTTCAGC GTAA GCTGAGGGGGA          TTTTTTACTGTTGTA 100 33
MTP40_RS06705 NONE
MTP40_RS06710 1408562 .. 1408591 + -16.5  -5.63103   CCTGTTATCATAAAG       CTGCCGTGCGGTT CCAA AGCTGCACGGCAG        TTTTTTTGCTTGACG 100 59
MTP40_RS06715 1409506 .. 1409533 + -10.7  -4.16842   AAAAGCCTAACCAAA        TTGCTCTGTCT TATGTC AGGCAGAGCAA         TTTCTTGAAGATAAA  87 101
MTP40_RS06720 1410049 .. 1410082 +  -8.7  -5.86976   GTTCTGATAGACTAA     CCGGCAGAGTGTAAG AATT CCGGCTCTCTGCCGG      TTTTTTGTTTTGTCA 100 66
MTP40_RS06725 NONE
MTP40_RS06730 1410695 .. 1410747 + -17.9  -2.92522   AATAATCTGTAATGG CAGAAAACTCCCCGCCCAGCGCCC AAGACA GGGCATTGAGCGGGGAGTTTT-TG TGTGCTGTTCAGTGG 100 36
MTP40_RS06740 1411817 .. 1411829 +  -5.5  -4.19735   TTTTTCGTGAATTTT                TCCTG CAT CAGGG                TTTGATTTTACAAAA  66 43
MTP40_RS06745 1413976 .. 1413987 +  -4.4  -2.59254   TTCAGCATTACACAC                GCAT CACT ATGC                 CCTTTTGTGCTCTTT  44 115
        rpsB NONE
         tsf 1415811 .. 1415844 + -13.3  -5.48623   ACTGAATGAATTTAA     GAGCTGTGGTA-CCTG TAA CAGGGTGTCACAGCTC     TTTTTGTTTGTGTTT 100 50
MTP40_RS06760 NONE
MTP40_RS06765 1417256 .. 1417292 + -16.7  -5.09245   AAGGATAAAATAAAA    TCTCCCACTGACGGGGT TCG ATGTCGTCAGTGGGAGA    TTTTTATCGTTTTAC 100 47
MTP40_RS06775 NONE
MTP40_RS06780 1420090 .. 1420117 + -14.9   -4.4267   GCCTGCATGACCCCC        TGCCTGTCCGC ATTCTG GCGGGCAGGCA         TTTTGCGTTTTAAGG 100 41
MTP40_RS06785 NONE
MTP40_RS06790 NONE
MTP40_RS06795 1423027 .. 1423076 + -16.5  -4.34402   TATGAGATAGTTCAG GAATAACCGGAAGCCAGCTCTGC CGGG GCGGGGCTGGCTTCTCGCTGTTC TTTTGATCTGGGAAA 100 20
MTP40_RS06800 NONE
MTP40_RS06805 NONE
MTP40_RS06810 1426422 .. 1426432 +  -2.4  -2.80935   CGGTTGCAACCGGGG                 CCGG AAT CCGA                 TATAATAAATCAAAT  40 47
         lon 1428954 .. 1428966 +  -3.3  -2.82516   GCACCGGAAAAACCG                AAGCC GGG GGCTG                TCTGCTAATCAAAGG  43 5
        yihA NONE
MTP40_RS06825 NONE
        hslO NONE
MTP40_RS06835 1431656 .. 1431682 + -10.8  -4.13945   ATTAAATAAGCAAAA         CAGCCCGGAG CGAAAAA CTCCGGGCCG         TTTTCAGGTGCAGAT  87 32
MTP40_RS06850 1434361 .. 1434374 +  -3.1  -4.18018   TGGAAATAAAATAAA               TGAGC ACAC GCTTA                TTTTAGATGGAGGAC  59 84
MTP40_RS06855 NONE
        nusB NONE
MTP40_RS06865 NONE
        xseA NONE
        xseB NONE
MTP40_RS06880 NONE
MTP40_RS06885 1438949 .. 1438967 +  -4.4  -3.54424   GCTTCCTCTATCCTA             TGGGCCTC TGA GCGCCCCA             TTTCAAAACGTGAGA  52 15
         dxs 1440865 .. 1440879 +  -7.2  -2.80354   ACATGGAAAGGAGCA               GAATCT TGA AGATTC               GTTTGGATCAATATC  57 17
MTP40_RS06895 1441704 .. 1441716 +  -4.8  -2.64155   ATCAGGGAGGGCGCG                GACG ATGAC CGTC                TACATTTCCCCAAAC  46 56
MTP40_RS06900 NONE
MTP40_RS06905 NONE
        recN 1445049 .. 1445082 +   -19  -5.20781   GTACCGCGATTTTCT     CGCCCTCTGCCAAA TTCATT TTTGGCAGGGGGCG      TTTTCTTTTGTCCTC 100 303
        tyrS 1446369 .. 1446403 +   -28  -4.85433   CAGCGTATGATAAAA     GCCCGGCGGCATCCGA TTT TTGGATGCCGCCGGGC     TTTTTACGTTTATGT 100 52
        queA 1452413 .. 1452436 +    -3  -4.18018   AACCTGCCGCCTGCC          CGGCGGCACA AGGC TGTACGGCTG           TTTTCCGTACACAGA  59 117
         tgt NONE
        yajC 1454039 .. 1454074 + -14.8   -5.0916   GCAAGGTCTTTTTTA    CCCGCCCCTCTGCA-TA CAG TAGTGCAGGGAGGCGGG    TTTTTATGTTGGAAC 100 50
MTP40_RS06960 NONE
MTP40_RS06965 1455393 .. 1455415 +  -5.6  -4.46926   AATTGTTTTTGCGTA           GGGAGTACTT GAC AGGTATTCTC           TTTTATGCTAAACTA  69 134
MTP40_RS06970 1455530 .. 1455570 +    -5  -5.68489   TCAGTAGCTCCAAAA GTCCTATGAATCTACGATGA ATT TCGTC-TGG-TTTATAGGAC TTTTTTGTTATTCTG  93 29
MTP40_RS06975 NONE
MTP40_RS06980 1456453 .. 1456496 +  -7.6   -4.2349   AGATGCATAGAAAAA TCCCCCCAGAGATTTCTGAC TGCAGT GTCAGA-G-CTCTGAGGGGA TTTTGCGTGTCAAGA  75 31
MTP40_RS06990 NONE
MTP40_RS06995 NONE
MTP40_RS07000 NONE
MTP40_RS07005 1461478 .. 1461513 + -14.2  -5.56264   ATCCAATAAATGAAA    TCGATGCTGTTTTGCA GAAA TGCAGAGTAGCATCGA     TTTTTTATGTTTCAG 100 72
MTP40_RS07010 NONE
        ybeY NONE
         era 1464116 .. 1464134 +  -4.6  -3.46068   CTTCAAACAGAACCC             GAATAATC GTT GATTTTTC             TCTTTACATTGCCCG  55 13
        recO NONE
MTP40_RS07030 1467416 .. 1467448 + -10.6  -4.30719   GGAGTTTCCCGGCAG     CGCCCGTCCGGAAGA TTAT TCTTTAGG-CGGGCG      TTTCTTATAAAACGG  85 51
MTP40_RS07035 1468468 .. 1468500 + -13.3  -3.67188   TTTGGGCGTTTTTAA      GGCCGCCTCGGCTCG ATT TGAGCTCCGGCGGCC      TGTTTTACAATAACT  93 186
MTP40_RS07135 NONE
MTP40_RS07140 NONE
MTP40_RS07145 1492405 .. 1492430 + -14.7  -5.55769   ACTGCAAAAAGCTCA         CGTCTGCCTGC ACCT GCGGGCAGGCG          TTTTTTGTTGTCAGC 100 42
MTP40_RS07165 1496417 .. 1496437 +  -2.6  -2.54193   CCGGCAAGGGGGTGC            GGCATGAA ACGTA TTTATGTC            TGCATTGGCATCGTA  40 19
MTP40_RS07170 1496835 .. 1496871 + -18.9  -4.11216   TGTGCACAATAAAAA    GCCAGGCTTTCTCGTGA AGT TCACGAAAAAGTCTGGC    TTTTAACGCTGGAAC 100 72
MTP40_RS07345 1535953 .. 1535964 +    -3  -3.62616   AACCAAGGAGGCTTC                TGTA TGAT TACA                 TTGTCTATCCTGATC  51 19
MTP40_RS07350 1536315 .. 1536334 + -13.6  -5.79595   TGGTTGTTTGTCTTT            GCTCTCCC CTCC GGGAGAGC             TTTTTTATTTTCAGC 100 52
MTP40_RS07355 NONE
MTP40_RS07360 1537296 .. 1537329 + -14.7   -3.8917   TTCAAAAAGTTCATT     TTTACCCGCTTGCAT TCCG ATGCAGGCGGGTATA      TTATTGTCATTAGCA 100 75
MTP40_RS07365 NONE
MTP40_RS07370 NONE
MTP40_RS07375 1541978 .. 1542006 + -13.3  -5.54907   CCCTTCTTTGAAAAA        GGCTCAGGTTT CGATCAA AAACCTGAGCC        TTTTTCTTTTGTCAA 100 49
MTP40_RS07380 NONE
MTP40_RS07385 1543159 .. 1543189 +  -8.3  -5.32699   TGCACTGAGCTTTCT      GCCGCTGTGGTTCT GGGT AGG-CCATGGCGGC       TTTTTTGGTCTTTGA  95 33
MTP40_RS07390 1543770 .. 1543782 +  -3.3  -3.31263   CGCCCGGATGAAAAT                GAAGG AGG CCATC                TTATGAAACTACCCT  48 7
MTP40_RS07395 NONE
MTP40_RS07400 1545465 .. 1545501 +   -13  -4.74706   GGCATAAACAGAAAG   CCACCCGGTCACAGACG GAAA CG-CTGCGACCGAGTGG    TTTTTAGCTGTTACA 100 54
MTP40_RS07410 1548215 .. 1548247 + -18.6  -4.43012   CTTATAACGAAAAGA     CAGGCGGC-TCCAAC CAAA GTTGGATGCCGCCTG      TTTTACTGTTCAGAT 100 34
MTP40_RS07420 1551006 .. 1551041 + -14.1  -4.42235   TAACGTTATAAACCT    TGCCCCTTCCTCG ATAATCCCGG CGAGGGAGGGGCA     TTCTTTTTGCAAGTT 100 65
MTP40_RS07425 NONE
MTP40_RS07430 1553172 .. 1553184 +  -4.1  -3.33744   AGCGTTGGAGCTTGA                TGTTC AGG GAGCA                ATTTTTGGCGCAGCG  50 178
MTP40_RS07435 1554377 .. 1554422 + -11.3  -5.00616   AAACTGTAAGCTGAA CAAGCGCCC-CCTCTCCGTCT CTTTTC AGA-GGGGAGGCGGGCGCTTC TTTTTTGGAGGGAAA 100 32
MTP40_RS07440 NONE
MTP40_RS07445 NONE
MTP40_RS07450 NONE
MTP40_RS07455 1557419 .. 1557432 +  -3.1  -3.28712   GCTCCAGCTCATACA               GA-CGC TCT GCGGTC               TTGTAGCCCAGCAAC  45 230
MTP40_RS07475 1562927 .. 1562955 + -14.6  -5.09426   GTGTTCTTTACAAAT        TGCGTTGTGCCG CAAAA CGGCACGGCGCA        TTTTTTACGCTTCGA 100 115
MTP40_RS07480 1564399 .. 1564425 + -10.9  -5.27335   CCGCATAACAAGAAA         TGCTCTCCTGT GCTTA GCAGGAGAGCG         TTTTTGTTTACAGCA 100 33
MTP40_RS07490 NONE
        pyrB NONE
MTP40_RS07500 1567331 .. 1567358 + -14.9  -5.80003   GGTACAAAAGCAAAA        GGCAGTGCGTC CCACGC GGCGCACTGCC         TTTTTTGTTTGTTAC 100 43
MTP40_RS07520 NONE
MTP40_RS07525 NONE
MTP40_RS07530 NONE
MTP40_RS07535 1573642 .. 1573668 + -13.1  -5.51165   GTTTTTCACTGACCG         TTTCCCGCTCT TTTCC GGAGCGGGAAA         TTTTTTTGAACTTTT 100 29
MTP40_RS07540 1574191 .. 1574229 + -17.6  -2.71712   CTTTTCTCCATACCC   CGAAAAGGCTCTGCCG TTTCTCC CGGCAGAGCCTTTTCC   CTTTCAACCAAAAAC 100 67
        typA 1577959 .. 1577990 + -18.8  -4.81851   GATCAACATAAAAAA      CGGCATCGCAAACC AATC GGTCTGCGATGCCG       TTTTTGCGTTTCGCT 100 56
MTP40_RS07560 1580674 .. 1580689 +    -9  -2.62184   CCTCGTGGTCTGTTT              TCGTGC TCCT GCACGA               TAATATAAAAGCCGA  63 65
MTP40_RS07565 1581990 .. 1582013 + -13.8   -5.4251   TAAGGCATAGCAAAA          CTCCCGCCCG GCTC CGGACGGGAG           TTTTTTCTGTGTGGC 100 60
MTP40_RS07575 1583780 .. 1583790 +  -6.8  -2.64981   TAAAACATTAAGTCA                 GGGA GTT TCCC                 TCAGTTTCACGCTGT  53 42
MTP40_RS07580 NONE
MTP40_RS07585 1585424 .. 1585468 +   -23  -4.95211   GCACCGTTCCTCCCT GCCCCGCTCTTTCCGGCAGA AGCGC TCTGCTGGAAGGAGCGGGAC TTTTGTTGATTTTTT 100 44
MTP40_RS07590 1587421 .. 1587442 +  -2.9  -4.46233   TCTGCGGATCTTCCC           GATCAGGGG CTTG CCGATGATC            TTTGTTTCCAGTTCA  66 346
MTP40_RS07600 1589301 .. 1589335 + -20.1  -5.06414   AACCATAGACAGCAA     CGGCGCTGTGGGTCA CCTCC TGACTCGCAGCGCCG     TTTTTGTTAAAAAGC 100 142
MTP40_RS07605 1591600 .. 1591643 + -14.7  -5.00616   CCTATTTCTTACACC AGCCTAAAGACCTGCTTTG CGTATA CGAAGCAGGCCTTTAGGCG TTTTTTAAGAACGCA 100 103
MTP40_RS07610 NONE
MTP40_RS07615 1593669 .. 1593690 +  -2.3  -2.77629   ATTGCACAGGAAATC           CTTGATTCT TACG AGGATTAGG            ATTATAATTTGGTGT  40 5
MTP40_RS07620 1595483 .. 1595518 + -18.4  -4.99056   GATCGCAACAAAAAA    GCAGCTGCACTCCGTG TTTT TACGGAATGCAGCTGC     TTTTTGCTTGTATTA 100 89
        rpsF NONE
         ssb 1598881 .. 1598891 +  -6.8  -3.31443   GTTCTGATTTCGTAA                 CGGT CTG ACCG                 TTCAATTCTTATAGG  59 34
        rpsR 1599221 .. 1599250 + -13.7   -5.9218   TCAGCAATCAGCAAA       GCGCTTTCACC GATGACAA GGTGAAAGCGC        TTTTTTTGTTGTGTC 100 70
MTP40_RS07650 NONE
MTP40_RS07655 1600658 .. 1600693 +  -3.2  -3.01712   GCCGGAACTATTCAG    TCTAACTTCCGTCCTCA TGC TGTGGACGGTGGC-AGA    TATTAACCAAAAGAA  45 21
MTP40_RS07660 1602111 .. 1602139 + -22.5  -5.08255   GTGTAAACCGTAATG        GGAGGCGGGCGAG CTG TTCGCCCGCCTCC        TTTTGTTTTGGAGGT 100 73
MTP40_RS07665 NONE
MTP40_RS07670 NONE
        malQ 1605376 .. 1605428 +   -22  -4.85195   TTTTCTCCCCATACA AAGACGGCAGGCACCAGCCCCTCC TTTCC GGAGGAACTGGTGCCCGCCGTCTC TTTTTGCATTATTTT 100 56
MTP40_RS07680 NONE
MTP40_RS07685 1606489 .. 1606527 + -19.1  -5.27335   CCCTGTAACATGAAA  GAGCTTCACAATTCCGGC TTCT GCCGGAG-TGTGAAGCTC   TTTTTGTTTGGCCGG 100 49
MTP40_RS07695 NONE
        rlmD 1610615 .. 1610629 +  -4.2  -4.33417   GGGATGATCTAACAT               CCTGCA AAA TGGAGG               TTTCTTATGGATAGA  65 29
MTP40_RS07705 1610886 .. 1610917 +   -13  -5.26875   CCTTAGATTAAAACT      CAGCCCTCTGCC TTTTCCTT GGCAGAGGGCCG       TTTTTTGCTTAACAG 100 30
MTP40_RS07745 NONE
MTP40_RS07750 1621177 .. 1621187 +  -6.8  -3.78934   GTACGCAGCAAAAGA                 GCGT AAA ACGC                 TTGTTATAGAAACAG  63 61
MTP40_RS07755 NONE
MTP40_RS07760 1623023 .. 1623073 + -17.8  -5.25735   TAAAAATTTACAATT TACACGTTGCGTACTTGTTGCGGC TAT GCTATAATATGTACGCAACGTGTA TTTTTGCTTTTTTGG 100 38
MTP40_RS07765 NONE
MTP40_RS07770 1625144 .. 1625172 + -13.2  -5.27335   CTAACAATCGGCATA        GCCGCAGACTTT CACAA AAAGCCTGCGGC        TTTTTCTTTGCCCAA 100 185
MTP40_RS07775 1626163 .. 1626194 +   -13  -4.12902   GAGAACCATTTACCT      GCGGCGACTGGTGGT TCC ACC-CTAGCCGCCGC      TTTTCCGACTACTTC 100 62
MTP40_RS07780 NONE
MTP40_RS07785 1628490 .. 1628509 +  -6.3  -5.01732   GTCGGATGAAGATGC            AGCCGCC GAATGA GGCGGCA             TTTTTTGAAAAAATT  87 13
MTP40_RS07790 1628826 .. 1628873 +  -5.4    -2.606   CAACTAACACTTAAA ATCCTACTCCGCGCTATCCC TCTCACAT GGGAGGGCGCGGGAAAGGAG GTATCTTTGCTTGAT  48 71
MTP40_RS07800 1632151 .. 1632167 +  -7.9  -3.31589   TGAAGTCTTTGCTGG              CGCTGGG TTT CCAAGCG              TTCCTGATTATGATT  64 219
MTP40_RS07810 NONE
MTP40_RS07815 NONE
         dcm NONE
MTP40_RS07825 NONE
MTP40_RS07830 NONE
MTP40_RS07835 1638970 .. 1639005 + -13.3  -3.24422   TCTCTTATCATAAAG    GAACCGGGTCTACCC ATTGTC GAGCAGACCCGGTTC     TCATTTTTCAAAATC  88 45
MTP40_RS07845 NONE
MTP40_RS07850 1642571 .. 1642621 + -25.8  -2.91582   TCATAATAAAATTAC GAGGGCCGGTTATGGTAAGGTGAA GCA TTCATTTTGCCATAACCGGCTCTC TCTATCCGTAGGATA 100 57
MTP40_RS07855 NONE
MTP40_RS07860 NONE
MTP40_RS07865 1647079 .. 1647118 + -20.8  -4.99035   TTGTCAAAACGAAAA  TAGCCGGACACGGTGGCC TTGT GGCTGCTGTGTCCGGCTG   TTTTTCTGTCAATCA 100 91
MTP40_RS07895 NONE
MTP40_RS07900 NONE
MTP40_RS07905 1653120 .. 1653138 +  -3.2  -3.24825   AAAGGCGGTGATGGC             TACATGAT GGT GTTATGTA             TCTTGCTTGCAATGC  46 30
MTP40_RS07910 1654027 .. 1654044 +  -6.9   -5.2189   TTGTCAATTCCTAAA             GGGCTGC TTCG GCGGCTC              TTTTTTCATCCTTAG  91 27
MTP40_RS07915 NONE
MTP40_RS07920 NONE
MTP40_RS07925 1655826 .. 1655863 + -17.2  -4.93365   CCGCGCGCCCATTTT   GAACCGGCGGCTTTTGA GAAAA TCAAG-GCCGCCGGTTC   TTTTTGCTTATCAAA 100 88
MTP40_RS07935 NONE
MTP40_RS07940 1656999 .. 1657031 +    -4  -4.87133   GATACGTTGCTGTCT      GTATCGAGCCGGAC GGCGG GTGCGCCACGATGC      TTTTCTTTGAAAAGT  74 115
MTP40_RS07945 NONE
MTP40_RS07950 1659398 .. 1659425 +    -7  -4.77775   TATAATAAACCGCAA        GGACAGCAATTT GATG ATACTGCTGTCC         TTTCTTTTATAAAAT  83 172
MTP40_RS07955 NONE
MTP40_RS07960 1661267 .. 1661279 +  -4.1  -2.73483   TGCTTCCCTTGCGTT                GAGAG AAA CTTTC                TGCTTCGGGTCAAGT  44 24
MTP40_RS07965 NONE
MTP40_RS07970 1664666 .. 1664696 + -18.4  -4.13748   TAGATCAATCATATC       GAAGCGGAGCAGAT TTT AGCTGCTCCGCTTC       TTTAGTATTTTTCAA 100 66
MTP40_RS07980 NONE
MTP40_RS07985 1666966 .. 1667012 + -12.2  -4.37092   GCTATCCCCTGTGTA CCCGCCGCAAAGAGAAATCCGC TCT GCGGTTTTCCCTTTTCATCGGG TTTTATAGAAGCACT  95 191
MTP40_RS07990 NONE
MTP40_RS07995 NONE
MTP40_RS08000 NONE
MTP40_RS08005 1671113 .. 1671136 +  -5.3  -3.66401   CTGCGGCTGTACACC          TGTCTGACA TTCCCT TGTCGGGCA           TATTTCATTTATGGA  59 246
MTP40_RS08010 1671375 .. 1671428 + -15.5  -4.64861   ATAACGACTGTCAAT CAGCCCACGCTTATGATATACTTGT ACCA GCGAGTATTGTATAAGCGTGGGTTG TTTCTTTTAGAAGGA 100 52
MTP40_RS08015 1673321 .. 1673333 +  -2.7  -2.52464   TGCGTTGCGGCATTT                TCAGA TGA TTTGA                TAAGTTGAAGCAACC  40 268
MTP40_RS08020 1675140 .. 1675164 + -16.5  -5.07652   TCCTTCTATGATCGA          TGCCCGTCTGA TTT TCAGGCGGGCA          TTTTCTTTTGCCGGA 100 42
MTP40_RS08025 NONE
MTP40_RS08030 NONE
MTP40_RS08035 NONE
MTP40_RS08040 NONE
MTP40_RS08045 1684123 .. 1684162 +  -9.4  -4.82901   ATTATTTTGCAATCA  GGACCGTCCGTTTTCAAGT TCA ACTTGAA-GCGGGCGGTTA  TTTTTCTGCACAAAA 100 245
MTP40_RS08050 NONE
MTP40_RS08055 NONE
MTP40_RS08060 NONE
MTP40_RS08065 1688086 .. 1688111 +  -8.4  -3.08679   ATATTTGTCCCAACA         CAGTGGCAAGG TCTCC CCTT-CCACTG         TATTACATACACGGA  63 56
MTP40_RS08070 NONE
MTP40_RS08075 1690948 .. 1690987 +   -18  -2.69799   TAGAACTGCGAACAA  GAAAACCGCCCTGCCGTA TAGC TACGACAGAGCGGTTTTC   TGCTGTATGGACTCG 100 127
MTP40_RS08185 1714221 .. 1714263 + -22.3  -5.80364   CATAACAACAAAAAA GGCCCTCTCCGTCA-TGCTT TGTA AAGCAATGATGGAGAGGGCC TTTTTTTCTTAAAAT 100 36
MTP40_RS08205 1719868 .. 1719883 +    -9  -3.23853   CTGCTAGCGTAATGT              TCTGCC TTGC GGCAGA               TGTTGATTGCAGAGC  67 155
MTP40_RS08210 1721259 .. 1721293 +  -7.8   -5.7946   TAAGCTTTCCGCTCT     CAACCCGTTCCCAG ATTTTCC CCGGGGACGGGTTC     TTTTTTTATTGCCCG 100 38
MTP40_RS08215 1722245 .. 1722276 +  -2.5  -2.73124   TGATACACTAACCAG      CAAAGTTCAGTATC TGTGT GATA-TCAACTTTG      ATTTGAACGGTGGCA  39 70
MTP40_RS08220 1723733 .. 1723783 + -24.2  -3.53224   GCAAACCCAATACTC TAATAGAGAACCCCCCTGCCGG TGATCTC CCGGCAGGGGGGTTCTCTATGC TTTAAGAAGCAACTA 100 73
MTP40_RS08295 1743103 .. 1743136 +  -5.4  -3.30651   CCAAGTATCATCTTC     CTTCATTTTTGCAT ACCCTA AAGCAAAAGTGAGG      TGTTCTGATATGAAA  54 191
MTP40_RS08300 1744215 .. 1744265 +  -7.4  -3.53012   CAAATTGTCAAAAGA TCCTGGGTCTCGGGTAGGCCCTGC TCT GCACAGCCTGACCGAAACGCAGAA TTTCAAGAGAAAGGA  64 9
MTP40_RS08305 1746801 .. 1746826 +  -6.1  -4.93296   GAACCAATAGAAAAA         GCCTGTCAG CGCAAAAA CCGACAGGC          TTTTTCTCATGCTCC  81 31
MTP40_RS08325 1750488 .. 1750528 +   -18  -2.85017   AGAAATAACCCTCTC TAAC-AAAAATTCCCGCTC GATG GAGCGGGAATTTTTTGTTA  TCATCTCTTCTTTTG 100 33
        rnhA NONE
MTP40_RS08390 1766077 .. 1766126 + -26.8  -4.91573   GAATAAAAAGCAAAA GAGATGCACCCCGCCTTCCTGAA ACCGG TTCAGGGA-GCGGGGTGCATCTC TTTTTGCTCTGTTTT 100 35
MTP40_RS08485 1785928 .. 1785971 + -10.9  -5.06414   GGTCTGTAAAAGCAA AACATCCCCGCACGGCCTG CCGAAA CAGGAAGTGCGGGGATGCC TTTTTGTTCAGAGGA 100 78
MTP40_RS08510 1790995 .. 1791008 +  -4.5  -3.68827   TCCCGGCCAGCCTGA               CGGCT GAAA AGCTG                TTTCGCTGATGGATG  57 3
MTP40_RS08515 1792789 .. 1792810 + -14.5  -4.35524   CCTGCCACCACAAAA           GGCTTCTCC GACG GGAGAAGCC            TTTTCCATTTACAAC 100 43
MTP40_RS08520 1793724 .. 1793761 + -26.5  -4.91977   ACCGTATGATAAGAA   CAACAGGCGGTGCCGGA AACT TCCGGTACCGCCTGTTG    TTTTCTGTTTTACTG 100 32
MTP40_RS08540 NONE
MTP40_RS08545 1797060 .. 1797097 + -18.3  -5.22289   ATCGAATACTAAAAA   CGCCCGGAGAACCGCAG CTTT CAGCGGCCCTCCGGGCG    TTTTTGTGTTTACTG 100 29
MTP40_RS08560 NONE
MTP40_RS08565 1803405 .. 1803428 + -15.4  -5.24796   TCAAATAGCAAAAAA          GAAAGGACGC TTTC GCGTCCTTTC           TTTTTGTTCTGTCAC 100 45
MTP40_RS08575 1805526 .. 1805561 + -24.1   -4.9218   TTGAGCATACCAGAA    CGCCCCCTGTGTGCC TGCTGC GGCGCACAGGGGGCG     TTTTTATCATACGTC 100 37
MTP40_RS08590 1809670 .. 1809683 +  -3.8  -4.72556   AAGAGCGGATACCAG               CAGG TACAGC CCTG                TTTTCTGCTTTTTGC  75 466
MTP40_RS08615 NONE
MTP40_RS08620 NONE
MTP40_RS08625 NONE
MTP40_RS08630 1814966 .. 1814982 +    -3  -3.34043   GCCTCGATGCAGCGC             TCCGGAG CGCG CTC-GGA              TTATGACCTGGTACA  47 3
MTP40_RS08635 NONE
MTP40_RS08640 1815980 .. 1815996 +  -2.9  -3.12351   CTTTGTATGGCAAAG              GCATTGC GAC GGGATGC              TTCGCTCTGCAAAGG  45 209
MTP40_RS08645 NONE
MTP40_RS08650 NONE
MTP40_RS08655 1818553 .. 1818580 + -14.9  -2.60032   ACTGAGTATCACCCA        CCGGAGGCTCCG CACAA CGG-GCCTCCGG        CCTTTTTGAAAGGAG  90 36
MTP40_RS08660 NONE
MTP40_RS08665 NONE
MTP40_RS08670 NONE
MTP40_RS08675 1823511 .. 1823521 +  -2.4   -3.5393   GAGCATACAGAACCC                 GCCG AAA CCGC                 TTTGAAAAACATACT  47 57
MTP40_RS08680 NONE
MTP40_RS08685 NONE
MTP40_RS08690 1825996 .. 1826042 +  -9.5  -4.82901   GTTTTCACAGCAAAA CCCATGCTATGCTCTTCTG GATAACACA CAGGAGGACAGAGCATGGG TTTTTCTAACGAGAG 100 134
MTP40_RS08695 NONE
MTP40_RS08700 NONE
MTP40_RS08705 NONE
MTP40_RS08710 NONE
MTP40_RS08715 1828918 .. 1828949 + -14.6  -5.27335   CGTAACGTTTTGCCA      TAGGTTCTCTGGTA CAAT TGCCAGAGAGCCTA       TTTTTATTTGCCCGG 100 43
MTP40_RS08720 1830249 .. 1830286 +  -6.9  -4.72272   AAATAACCATTCCCC   TGCCGGGGCCGGT TTTCTACTCCTT TCCCGCCCCGGCA    TTTTTCATAGCCAAA  80 35
MTP40_RS08725 NONE
MTP40_RS08730 NONE
MTP40_RS08735 NONE
MTP40_RS08740 NONE
MTP40_RS08745 1834938 .. 1834957 +  -2.8  -3.32946   GAAAATGAGTCGTGC            TGGACTTT CTGA AAAGGCCG             TGTTATACTTCAGGC  47 33
MTP40_RS08750 1835601 .. 1835641 + -21.4  -3.61652   GTTTCGTGATGACAG  TAGAAAAGGCCCGTAGGT TAAAC GCCTACGGGCCTTTTCTG  TTACTTATTTACCGG 100 121
MTP40_RS08790 1838122 .. 1838173 + -27.5  -3.52192   AGTGACCGCTACACC GCAAAACGCCCCGCGCTGAAGAGG ACAAA CCTCC-CGGCGCGGGGCGTTTTGC TTGTATACGGTTGCA 100 36
MTP40_RS08795 NONE
MTP40_RS08800 NONE
MTP40_RS08805 NONE
MTP40_RS08810 NONE
MTP40_RS08815 NONE
MTP40_RS08820 NONE
MTP40_RS08825 1842447 .. 1842472 + -12.6   -2.6933   TAACAACACCACACA         GCCCTCGTTC CCCGGT GAACGGGGGC          CCTTTTTGTAACAGG  81 41
MTP40_RS08830 NONE
MTP40_RS08835 1843659 .. 1843692 +  -8.8  -3.92373   GCGGCAGAGCGCTGC     CCGTGTGGGC-GGCT CCCGA AGCCTGCGCCCACGG     TTTGTGGGTGAAATG  73 70
MTP40_RS08840 NONE
MTP40_RS08845 NONE
MTP40_RS08850 NONE
MTP40_RS14460 NONE
MTP40_RS08860 NONE
MTP40_RS08865 NONE
MTP40_RS08870 NONE
MTP40_RS08875 NONE
MTP40_RS08880 NONE
MTP40_RS08885 1852593 .. 1852640 + -22.9  -3.53811   CGCCGGGCGATTTGA TAAAGCACAGCCCCGGACAGT AAGATC GCTGTCCGGGGCTGTGCTCTG TTTACGAAAAGTCAA 100 139
MTP40_RS08895 NONE
MTP40_RS08900 NONE
MTP40_RS08905 NONE
MTP40_RS08910 1856647 .. 1856693 + -22.6  -4.79373   TCCAATAGAAAAACA TATCCCCCGCTGCA-GACGTG CCAGAA CACGTTTTGCAGCGGGGGATA TTTTATGTTCTCTTC 100 64
MTP40_RS08925 1859538 .. 1859584 + -18.9  -5.02287   CGCATATTACAGCAA TGTAAAACGCCCGCTCCGG GGTCAGAAG CCGGAACGGGCGTTTTACG TTTTCTCTTTTTCTG 100 63
MTP40_RS08935 1861200 .. 1861228 + -13.2  -4.73388   CAGATCACCAAAACA        GCCTCAGCCC TTTGAGATC GGGCTGAGGC        TTTTTCATCCGCATT 100 98
MTP40_RS08990 NONE
        gltA 1870370 .. 1870396 +   -13  -5.13344   CCCCTATAGAAAAAA         GCCGGTGCGC CAAGAAA GTGCACCGGC         TTTTTCTCTTCATAT 100 45
MTP40_RS09005 NONE
        pfkB 1873096 .. 1873114 + -10.2  -3.05268   GCTGACGCGATGCCA             CCTCCCCC AAA GTGGGAGG             TCTTGACAGTCATTG  72 63
MTP40_RS09015 1875188 .. 1875226 + -20.4  -3.86944   TTTACCATAGAAAAA  GGGCCCGTCTGCGCGCA CCAAAA TGCG-GCAGGCGGGCCC   TTTCGTGCTTATCCC 100 61
MTP40_RS09025 NONE
MTP40_RS09030 1880394 .. 1880413 +   -15  -4.37658   GTTTATGATCTTTCC            GGCTCCCC TGTG GGGGAGCC             TTTTGTGACCCCATT 100 33
MTP40_RS09035 1882963 .. 1882998 + -13.2   -2.5639   CTGCACCTGTAACCA    AAAGAGGGACCCCGCC CAAC GGCGAGGTCCCTCTGA     CATTTTATGATAAAT  84 29
MTP40_RS09045 NONE
MTP40_RS09050 1886241 .. 1886268 + -19.2  -4.26903   CTTTCCATGACCCAA        GACCGCTCTGCC GCCG GGCAGGGCGGTC         TTTTGCTGCAATAAC 100 52
MTP40_RS09055 1887790 .. 1887819 + -17.3  -4.34759   AAACTGTAACCATGA       CCGGACGTTCGAT TGCA ATTGAACGTCCGG        TTTATTCGTATTATA 100 56
MTP40_RS09060 1889503 .. 1889514 +  -2.2  -4.67353   AATGGACAACGGTTT                CTTC TAAG GAGG                 TTTTTCCATGCGTAC  67 19
MTP40_RS09065 1890567 .. 1890585 +  -4.6  -3.81472   AGATCCTTTGCTAAA             CTGAAAAA AAG TTTGTCAG             CTTTTTTCGTTTCAC  59 78
MTP40_RS09070 1891220 .. 1891244 + -20.1  -5.28481   CCAGATACAGCAAAA          CGAGGACAGCC ATT GGCTGTCCTCG          TTTTTTGCTTCAATC 100 45
MTP40_RS14465 1896753 .. 1896763 +    -4  -5.22289   TAAAATTTCTTTCAC                 TTTC CAT GAAA                 TTTTTGTGTTTCGTC  80 78
MTP40_RS09120 1899613 .. 1899665 + -28.6  -3.45571   GACTGAGACAAAAAA CACTCCCCTTCGGGTGGAGCCGTG CGGCA CACGGTCCTGCCCGAAGGGGAGTG TTGCTGTTTAAAAAG 100 35
MTP40_RS09145 1909344 .. 1909393 + -19.5  -3.31438   GCACAAGCCCCAGCA AAAAAGACCAGAGTTGTTTCGCC AAAA GGCGTTACAACTCTGGTCTTTTG CTTTCTTTCATGTGA 100 65
        htpG 1912656 .. 1912688 + -12.7  -5.79595   CCCCTTAACAAAAGG      GCCGTGCTCCGCTAT AAT AAAGTGGAACACGGC      TTTTTTATTTTAGGA 100 65
MTP40_RS09165 1913921 .. 1913932 +  -7.2  -3.56568   TAGAATCAGAAGAAC                GGGC CCTG GCCC                 TTTGAAGAATCATTC  64 115
MTP40_RS09170 NONE
        galT 1916929 .. 1916940 +  -2.2   -4.8667   TCGCCCGCTGGCCTG                CTTC CCGG GAGG                 TTTTTATGCCCTATA  70 201
MTP40_RS09180 1917723 .. 1917759 + -22.5   -4.2704   TTATAATCCATAAAA    CGACCCCGGAAAGCT GCAGTCA AGCTTTCCGGGGTCG    TTTGTTGATCATCGC 100 35
        holA NONE
MTP40_RS09200 1921548 .. 1921570 + -14.9  -4.74103   CTGACAGACAAAAAA           GGAGACCGC ACCGC GCGGTCTCC           TTTTTGCGTTACAGG 100 37
        thiD 1923930 .. 1923969 +  -7.6  -4.67011   AGAACAGGATTCCCA  GTCCCGCCGCCAGCAGGA TCAT TCCAATGGGCGACGGGGC   TTTTTGCGTCCGCTT  83 78
MTP40_RS09270 1935991 .. 1936024 + -18.1  -2.90901   ATATCACTTATATGT     ACAGCCCCCGCCAAC ATTC GCTGGCGGGGGCTGC      TATACTTACAGCTCT 100 49
MTP40_RS09305 1941423 .. 1941481 + -16.3  -3.55824   TGGCGTAAAGAATAA AAGACACAAAAATGCCCTCTGAAAAAC TTACC GTTTCTCAGAGGGCATTTTCATGTCTC TCTTTATGAATAATC 100 26
MTP40_RS09370 1962295 .. 1962315 +  -8.3   -3.2653   GATACCATTCGTTAC            GAGACCAAC AGC GTTGCTCTC            TTCGCTTATGGTTGA  64 59
MTP40_RS09375 1963326 .. 1963336 +  -3.2  -5.00616   CGTAGACTTGTTGGC                 TGTG GAT CGCA                 TTTTTTACCGGCACG  73 61
MTP40_RS09385 1965894 .. 1965944 + -14.1  -2.55061   TATCATTTCTCCTTC ATCTGCTG-TTCCCCGGAGGAATC CAGC GATTCCTCCGGGGAGGCTGGAGAA ATATTATAAAATTAT  87 52
MTP40_RS09390 1969325 .. 1969354 + -13.8  -4.84761   TAGGATATAAAAAAA       TCCAACGATTTC TAACGT GAAATCGTTGGA        TTTTTGTCGGAGTGT 100 285
MTP40_RS09395 1971353 .. 1971383 + -10.5  -2.93715   TCAAGGGCAGCGCCG      CCG-CAGGCGGTGCC GGA GGCACC-CTTGACGG      ATTTCTCCCGGTTAT  72 161
MTP40_RS09400 NONE
MTP40_RS09405 NONE
MTP40_RS09410 NONE
MTP40_RS09415 1974739 .. 1974761 + -19.2  -4.66537   ATGCCGAGCGGTAAG           CCTCGGGCCA CAT TGGCCCGAGG           TTTTCTGTTCCCCGA 100 27
MTP40_RS09420 NONE
MTP40_RS09425 1977144 .. 1977161 +  -9.8  -5.67063   ATGTTGACCCGAAGC             GCCGCC GATGTG GGCGGC              TTTTTTTGTACTCAA 100 50
MTP40_RS09430 1977596 .. 1977623 + -15.6  -4.21194   CACACAGGTAGGCAC        GACCCCGGCG GACTGGAA CGCCGGGGTC         TTTTCCATGATACGA 100 197
MTP40_RS09440 1980706 .. 1980727 +  -6.5  -2.62613   GGAAACCGGACACAT           GGGGCAGAA CTAT TTCCGCTCC            CTCTTTGCGGTGGGC  53 190
MTP40_RS09450 NONE
MTP40_RS09455 NONE
MTP40_RS09460 1982705 .. 1982717 +  -6.2  -3.01712   AAGCCTGAAAAGCAG                GGCC TTACC GGCC                TGTTCACGAAAGGAA  53 33
MTP40_RS09465 1985049 .. 1985071 + -15.6  -3.53012   ACCGGGCATAACACA           CTTCGGGCCA TGA TGGCCCGAGG           TTTGGAAAGGAGGGA 100 30
MTP40_RS09470 1986973 .. 1986984 +  -3.6  -3.85698   GCAGACACATTTCTA                TGCC TTCG GGCG                 TTTGTGAGCCAGAGG  55 7
MTP40_RS09475 NONE
MTP40_RS09480 NONE
MTP40_RS09485 NONE
MTP40_RS09490 1988530 .. 1988552 +  -3.4  -3.80019   CCGGGCTTTTTTGAG           GGTGTTTCCG GGG TGGGAATATC           TTATTACATTTCTCC  55 45
MTP40_RS09495 NONE
MTP40_RS09500 NONE
        mobC 1989770 .. 1989813 +   -16  -5.43866   CTGGTGGCAAAGTAA GACGAGGGCGGCAGGCTTCCG TTG CGG-GGCTTGCCGCCCTGCTC TTTTTTTACCACTTC 100 26
MTP40_RS09510 1990265 .. 1990288 + -13.8  -3.96148   TACTGGCCCGAAGTC          GGGGCGGTCT GAAT GGGCCGCCCC           TTTCTCATGGAAAGG  95 55
MTP40_RS09515 1992172 .. 1992188 +  -2.1  -4.84914   CTAATTCCGCAACAT              AGGCTTG TGT CCAGCCC              TTTTCTTCTCTGGCT  70 467
MTP40_RS09535 NONE
MTP40_RS09540 NONE
MTP40_RS09545 NONE
MTP40_RS09550 1997565 .. 1997591 + -18.8  -4.65182   CGCCCATACGACTAG         CGGCGGCTTTGA TTT TCAGAGCCGCCG         TTTCTTTCGTTTATC 100 142
MTP40_RS09555 1998804 .. 1998814 +  -4.6  -2.82516   CCTATGGGGAGCCCC                 CGGC AAT GCTG                 TCTGATGATAGGCCA  47 462
MTP40_RS09560 1999118 .. 1999140 + -13.4  -4.24002   GGAGAAAACTCAAAG           GGCGGCACCT GCC GGGTGCCGTC           TTTTGACATTTCCCC 100 65
MTP40_RS09565 NONE
MTP40_RS09570 2001184 .. 2001194 +  -2.6  -3.87994   TTGTGGTTCCTTAAC                 TTTT TCC AAAA                 TTTATGCCAATCAAT  53 223
MTP40_RS09580 NONE
MTP40_RS09590 2003420 .. 2003449 + -13.8  -3.96148   CTATAAACAAAAAAA       TCCAACGATTTC TAACGT GAAATCGTTGGA        TTTATGGTCCAGCAA  95 126
MTP40_RS09640 2013423 .. 2013439 +  -6.7  -3.85698   CCAAAAGGGCAAGAA              TTTTCAA GAA TTGAAAA              TTTGTGGCCACGGGA  66 89
MTP40_RS09645 2014031 .. 2014042 +  -4.4  -3.14344   ATCCGGTAACCAATC                CTGT ACTG ACAG                 TTGCTCCACAGAATA  48 68
MTP40_RS09650 2015824 .. 2015851 + -19.2  -5.00895   GTCTGTGGTCTTTGG        CAGGGTGCGTCC GGGT GGGCGCACCCTG         TTTTTGTATGCTAAA 100 140
MTP40_RS09660 NONE
MTP40_RS09665 2019383 .. 2019395 +  -6.3  -3.53224   TACAGTCTTTAATGC                TGCAT AAC ATGCA                TTTAACGAAAAACTC  61 86
MTP40_RS09840 2054574 .. 2054595 + -10.1  -3.27907   AAGCATAAAAAATGA           CCGCCTTGG TCAC CCAAAGCGG            TTAAGTTGTATATGA  75 33
MTP40_RS09845 2055853 .. 2055874 +  -7.9  -3.27907   AAGCACAAAAAATAA           CCGCCTTGG TTTC CCGAAGCGG            TTGCATTGTATATGG  64 228
MTP40_RS09850 2056445 .. 2056467 +  -4.8  -3.53343   TTTGCACATAAATAA           TTCTGCCAGG CAG TCTGACGGAA           TTTAGAAGGAGAATT  55 26
MTP40_RS09855 2056999 .. 2057031 +  -6.8  -4.78237   TTGCTTTGTGAGGAG      GTGCGGCCGGGGAC TTCAC GACCCGGTCTGCAC      TTTTATTGTAGCATG  80 116
MTP40_RS09890 2064579 .. 2064601 +  -9.1  -4.81551   AGAGGGCTTTTTTCT           TTCCCGCCA ATTCC TGGCGGGAC           TTTTTCATATCCGTC  93 359
MTP40_RS10005 2084960 .. 2084971 +  -5.8  -3.10531   CCAGTTTCCGCATCT                GCTG CCCG CAGC                 TGTCTGTCCTTTTCC  49 238
MTP40_RS10030 NONE
MTP40_RS10035 2092439 .. 2092485 + -12.3  -4.85599   ACCTCCCGCATAGAC AAAACGAACGCCTGCCGGG CTTTTCTCA CACGGCAGGCGTTCGTTCG TTTTTATGGGGTCGA 100 112
MTP40_RS10060 NONE
        smpB 2099166 .. 2099181 +    -9   -4.3739   ACTTCAAAGCTTACC              CACACC GCAA GGTGTG               TTTTATGGGGGCGTA  83 66
        ssrA 2099536 .. 2099594 + -22.3  -3.67877   CCCATCGCCTCCACC -A-CACAAGAAAAATCCGAACCTCTTCCC ATC GGGAAAAGGTTCGGATTTTTCTTGTGCTG TATTTCTTACCGCGT 100 25
MTP40_RS10090 2105701 .. 2105730 + -20.1  -4.70107   CTGATACAGCAAAAA       GCGGATGCGTTCC GGTG GGAGCGCATCCGC        TTTGTTATTTTGCTC 100 37
MTP40_RS10140 2116681 .. 2116710 + -14.3  -3.70902   ACTGACACCTAAAAA       GAGGGCCGTTGCT TTTT GGCAACAGCCCTC        TTTCGCTCTCAAAAA  95 63
        rnpB 2121163 .. 2121182 +   -10  -4.67038   AGGCGCAGAGGCAGA            GAGGGTTG ATAA CAGCCCTC             TTTTCGTTTTGGCCA 100 93
MTP40_RS10165 NONE
MTP40_RS10170 NONE
MTP40_RS10175 2125323 .. 2125356 + -23.3  -3.59405   CAGAATAAAACAGCA     CAAGCCCCGGGCCTT GCAA AAGGTCCGGGGCTTG      TTGTCTGCTGATTTT 100 43
         pyk NONE
MTP40_RS10195 2129782 .. 2129818 + -22.4  -4.81249   AGCGATACAGCAAAA    GACCTCCCCATGCAGG CAGCA CCTGCACGGGGAGGTC    TTTTTACGTTTCAGG 100 40
MTP40_RS10365 2167510 .. 2167541 +  -3.7  -6.58542   TCATATCCATTGTCA      GCCTGATTTGTGC TCTTTT GTATGGGTCAGGC       TTTTTTTTTTTACGC 100 108
MTP40_RS10385 2172932 .. 2172983 +  -6.1  -3.53811   CACCTCCCCCAAAGT GGGA-GGC-CTTGGCAGTAAATGCAA GGT TTGCGGTT-TTGTCAAGAGCCCTCCC TTTGGGAGAGCTGGA  59 77
MTP40_RS10395 2175073 .. 2175122 + -22.5  -4.98857   GAAGTAACGTAAAAA TCCCACCCTCTGTTCATCGGGCA CATAAA TGCCCG--GAACAGAGGGTGGGA TTTTTGTAATTCGAT 100 34
MTP40_RS10405 2177001 .. 2177033 + -15.6  -2.78897   AACAGATGAAAAAAA      CTCCCCGCCGTGAG ATTCA CTCACAGTGGGGAG      TCCGTTTTGATAGTT  95 39
MTP40_RS10420 2178780 .. 2178802 + -14.2   -5.8096   AGTAACGCCTTCACC           TGCCTTCCCA ACA TGGGAGGGCA           TTTTTGTTTTTTCTG 100 36
        polA NONE
        tsaD 2182477 .. 2182519 + -17.9  -4.63527   CGAAGCAAAACCAAA GCTCCCGGAGCGGTGCGGCAT TCA GTGCC--ATCGCTCCGGGAGC TTTTTGCCCTGCTGC 100 42
MTP40_RS10470 NONE
        murI NONE
MTP40_RS10480 2188886 .. 2188904 + -10.2  -3.02461   GCTTGCGCGATGCCA             CCTCCCCC AAA GTGGGAGG             TCTTGACAGAAATTA  72 64
        argS 2190870 .. 2190905 + -12.6   -5.9218   GTGCCAACGAAAAGA    TGAGATAGACTTCCCC GAAA GGGGGTGCCTATCTCA     TTTTTTTATTGTATG 100 71
MTP40_RS10490 2193845 .. 2193893 + -12.6  -4.24342   AGAACTAACCCCTGG CAGGCAGAAAGCCCCC-TGACGAT TAC ACTGTCAAGGGGGCTTCCTGC-TG TTTATTGGTGAACCA 100 33
MTP40_RS10500 2196175 .. 2196215 + -25.7  -4.75372   AGAAGATAACAGAAA  CAACCCTCTCCGTCATTAC TTC GCAATGACGGAGAGGGTTG  TTTTTAGTCAATCGT 100 32
MTP40_RS10535 NONE
MTP40_RS10540 NONE
MTP40_RS10545 2205680 .. 2205709 +   -10  -5.09173   CAGGCATAGCACAAA       GGGGAGAGC-ACC TTCAC GGTTGCCCTCCCC       TTTTTTCAGCTGTTC 100 32
MTP40_RS10620 2223881 .. 2223904 + -13.9  -5.31059   CCTGCACACAAAAAA          GACGCGCTC ATCACA GAGCGCGTC           TTTTTTGCTTGATAT 100 48
MTP40_RS10665 NONE
MTP40_RS10670 NONE
MTP40_RS10675 NONE
MTP40_RS10680 NONE
MTP40_RS10685 2238198 .. 2238242 + -15.1  -4.27465   CCTTACAGACAGAAC AACGCCCGCCGGGTGTGGTAC TTCTC GTACCGC-C-CGGCGGGCGTA TTGTTTTGCATTCTA 100 44
         eno 2246286 .. 2246321 + -18.4  -4.48449   CCTGTTTCCGCAAAA    GAGGGTCGCTGCAC ATTGCTCC GTGCAGCGGCCCTC     TTTCTGTTTTGATGG 100 68
MTP40_RS10770 2254817 .. 2254829 +  -3.3   -4.8667   GAGCGGCTCGGGCTG                TGACC GTT GGGCA                TTTTTGTGCAATGTA  73 23
         eda 2255982 .. 2256010 + -12.4  -2.62263   ATTTCCACGGCGTTT       CCCGCCGCACCGG TCCA CCC-TGCGGCGGG        TGATATAAAACACAT  78 51
MTP40_RS10780 NONE
        kduI 2257963 .. 2257988 + -17.5  -4.65895   TAAACACAAATAAGA         CCCCGCACCGG CGAT CCGGCGCGGGG          TTTTTCAGTAAAGGA 100 38
MTP40_RS10790 2258899 .. 2258925 +  -2.2  -4.19879   TGCTGGCGGGCATCA         GCAGGACGGAGA GGG TCTTTGTCATAC         TTTTCACACTTTTGT  57 111
MTP40_RS10795 2259647 .. 2259681 + -12.9  -4.29472   ATTAAGCGACCCCAA     CGGTCTGAATCCTGT ATTGC ACAGGGCTCAGGCCG     TTTAGTTTTAATTTG 100 122
        uxaC 2266790 .. 2266819 + -18.6  -5.55769   CCATAACTTGTAAAA       GCGCTCTGCCGG TTTGCC CCGGCAGGGCGC        TTTTTTCTTGTGCGG 100 63
MTP40_RS10830 2267690 .. 2267704 +  -3.4  -2.77148   AAATAATGCTAACAC               CGGAGG CGG CTGCCG               TGGTATCTTAATAGC  43 72
MTP40_RS10835 2269107 .. 2269147 + -18.4  -4.85599   GAGAACGCATAAAAA TACCCCTCTCCGTCCGTGC GGCC GCACAG-CGGAGAGGGGTG  TTTTTATGCGATCAA 100 29
MTP40_RS10860 2273717 .. 2273754 + -19.9  -3.66784   TGGCTGACACGCAAA   AGCGGCCCCGGAGAG TTTTCCTT CTCTCCGGGGCCGCG    TTCTGTTCCGGCTCA 100 34
MTP40_RS10870 2276496 .. 2276521 + -14.1  -4.57516   TTTATATTATACTGG         GGGATGGCAGA AGCT TCTGTCATCCC          TTTTGATTTACCTCT 100 60
        tsaE NONE
        tsaB NONE
        rpiB NONE
         upp 2278860 .. 2278917 + -23.1  -3.01712   ACGGCACGAAGTAAA TCTGAATCAACAAAAAGTGGACGGTTC ACAC GAACCGCCCACTTTTTGTTTACTCAGA TATTACCGCCCGCGG 100 27
        ftsH 2292800 .. 2292832 + -17.8  -4.75372   CCTGCAATAAACAAG      CCGCCCGTTCCGTA TTCAT TACAGAACGGGCGG      TTTTTCGTCCATAGT 100 52
MTP40_RS10955 2293533 .. 2293582 + -24.4  -3.56643   GAAGCTTAACAGAAA CACAACAGGAGCGCTCTGCCGG TATGAC CCGGTGGGGCGCTCCTGCTGTG TTTGGGAAATATCAG 100 63
        uidA 2306499 .. 2306557 + -12.7  -4.45544   GCGAAAAAAATGATC CCAGA--AAAC-AGCAGCGCCCTGCCGG TTTACC CCGGCAGGGCGCTGCTTGTTTGATATGC TTTTACTTGATGCAG 100 28
MTP40_RS11045 2321649 .. 2321680 +  -8.1  -5.45802   CCATTATATTACATA      GCGCACCACTTTTC AATAA GAAAAGAG-TGCGC      TTTTTATTTTCAAAC  95 50
MTP40_RS11050 NONE
MTP40_RS11055 NONE
MTP40_RS11060 2324356 .. 2324369 +  -3.8  -5.46706   TATACCGTAACGAAA               GACC CGATGA GGTC                TTTTTCTTTTGCAAT  83 43
MTP40_RS11065 NONE
MTP40_RS14440 NONE
MTP40_RS11070 NONE
MTP40_RS11075 NONE
MTP40_RS11080 2327629 .. 2327652 +  -8.1  -5.13722   GACGCTGATTCGCTC          CCGTCTGCC TGACCC GGTAGGCGG           TTTTATTTTACTCGG  90 14
MTP40_RS11085 2328258 .. 2328272 +  -7.2  -2.71364   CGTTGATTGCTTCGG               TCAAAG CCT CTTTGA               TGATTCCCAGCATGA  51 286
MTP40_RS11100 NONE
MTP40_RS11105 NONE
MTP40_RS11110 NONE
MTP40_RS11115 NONE
MTP40_RS11120 NONE
MTP40_RS11125 2335624 .. 2335650 +  -7.2  -3.05844   CCGAACCTATCTGAT         TTTAAGGCGGCG TTT TGCCGCCGTACA         TATTGCAATCCGAAA  59 27
MTP40_RS11130 NONE
MTP40_RS11135 NONE
MTP40_RS11140 NONE
MTP40_RS11145 2339435 .. 2339448 +  -4.5  -3.10297   GTGTGGTATACTGAA               CTCGA CAAA TCGGG                ATTTATCTGTATGAT  50 91
        iadA 2340888 .. 2340917 +  -2.2   -4.8622   TCAGCAGAAGGATAC       CCGAAAGAAATA AAAATA TTTTTCTTTCTG        TTTTTGATTGACAAA  70 88
MTP40_RS11155 NONE
MTP40_RS11160 2341916 .. 2341941 + -11.1  -5.63517   GTTTTAATTCCATAA         GCGAGTGACCT GAAA AGGCCGCTCGC          TTTTTTGTTTACAAC 100 97
MTP40_RS11165 2343160 .. 2343185 + -14.7  -5.18371   GAATCCATCGACCAA         GCGGAGAGCGA AAAA TCGCCCTCCGC          TTTTGTTTTGTCGCA 100 82
MTP40_RS11170 NONE
        mobC 2349603 .. 2349613 +  -5.4  -2.80784   TAACAGTTGACATCC                 TTGC AAC GCAA                 TCGTTGATACCTTTA  49 77
MTP40_RS11180 2349918 .. 2349929 +  -3.6   -2.5805   AGAGCGTTTTAGTGG                CTGG GTTG CCGG                 ATTGTGAGGGATGCT  42 7
MTP40_RS11185 2350209 .. 2350226 + -12.7  -5.28942   GAAGAATGATTCAGA             TGCCGCC TCCG GGCGGCA              TTTTTCTTTGCAATA 100 32
MTP40_RS11190 2351884 .. 2351903 +  -8.5  -4.67904   TATCACAGGACGGTG            CCGGGGG CGAATT CTCCCGG             TTTTTGGACTTCCTC  88 237
MTP40_RS11200 2355310 .. 2355337 + -14.2  -4.56597   ATCCTCCTAAATAGA        CAGCCCGGAG CTTCTCCT CTCCGGGCTG         TTTTTGAGAAAAGCG 100 104
MTP40_RS11205 NONE
MTP40_RS11210 NONE
MTP40_RS11215 NONE
MTP40_RS11220 NONE
MTP40_RS11225 NONE
        garD 2363245 .. 2363259 +  -4.3   -3.4456   ACCTTATGGAGGGAA               CGATT ATGAA AATCG               GTTTTATTGGTCTGG  52 85
        garR NONE
MTP40_RS11240 2365032 .. 2365045 +  -8.1  -2.63301   CTTTGTAAAGACTAT               GACCG AAGC CGGTC                TGCTGTAAACCTGTG  58 4
MTP40_RS11245 NONE
MTP40_RS11250 2367228 .. 2367267 + -12.2  -4.56914   AAGCTCCAACAAAAA  GACCAGAGTTATTTAGCC GAAA GGCTTTACAACTCTGGTC   TTTTGCTTTGGGTAG 100 72
MTP40_RS11265 2369400 .. 2369425 +  -7.5  -4.87389   AACACCTATGTCAAA         GAACGCCAGCA ACCG TGCTGACGCTC          TTTCTTTTTGCCCTC  85 39
MTP40_RS11270 2370505 .. 2370516 +  -5.8   -3.1829   AACTGCACTTGTGCA                TGGG TATC CCCA                 TCTTCATCCTGCTCT  51 519
MTP40_RS11420 NONE
MTP40_RS11425 NONE
MTP40_RS11430 2395411 .. 2395436 + -11.9  -4.40605   TTTAGCCTTCAGGTA         GCCTGCTCC CGTAAAAA GGAGCAGGC          TTTATGTTTGTCCGT  93 431
MTP40_RS11435 2396297 .. 2396337 + -22.7  -5.48825   TTAATCATATTGATC  CGGGAACTGTCGGGTACGT TCC ACGCATCCGGCAGTTCCCG  TTTTTTTACGTACTC 100 292
MTP40_RS11440 2396662 .. 2396689 + -10.6  -3.57144   CATACCTTGAACGAA        GCTCGTTG-CGGA ACA TCCGGCAGCGGGC        TTTGCACATAACAAC  77 55
MTP40_RS11445 NONE
MTP40_RS11450 2398216 .. 2398246 +  -6.9  -3.73816   TATCTCCTTTGGCAA       GTGAGATGGTC CCCGAAAAA GACCATCACAC       TTTACATATAGTATT  63 48
MTP40_RS11455 NONE
MTP40_RS11460 2400273 .. 2400285 +  -4.1  -3.71645   ACATGGTTTCCCGAA                CGATT TTG AGTCG                TTTGCGTCTGCCATT  54 127
MTP40_RS11470 2401245 .. 2401262 +    -7  -3.61398   GATGCAAGGTTTTTC             TACCGG TGCATT CCGGTA              TTATTCCCACACGCA  64 150
MTP40_RS11475 2401668 .. 2401717 + -17.3   -4.1964   TTTTTCACCGCACAG AAAAAGACCAGAGCTGTTCTGCC AAGT GGCAGTTCAGTTCTGGTCTTTTG TTTTACAATGTTACA 100 55
       coaBC 2405823 .. 2405855 +   -12  -4.82901   GTTTATAAAAACTTT      TATCCCTCTCCGTC AACCC GGCGGAGAGGGTTG      TTTTTGTAAGAAAAA 100 33
MTP40_RS11500 NONE
MTP40_RS11505 NONE
MTP40_RS11510 NONE
MTP40_RS11515 2410109 .. 2410124 +  -3.3  -4.23104   TCTTGCGTTTTTTGG              CAAAG TTCGCC CTTTG               TTTCTTGACATTTCC  60 47
MTP40_RS11520 NONE
MTP40_RS11525 2413077 .. 2413134 + -15.7  -3.72743   AGGCCCAGCAGTAAC CCCCGGATAAGAAAAATCCCCGCCGTC GCAA GACAGCGGGGATTTTTCTTATCCCATA TTACTTTTCGTAGTC 100 27
MTP40_RS11535 NONE
MTP40_RS11540 NONE
MTP40_RS11545 2417023 .. 2417052 + -25.1  -4.79352   TCCCTGAATACGCCA       GGAGGGCGGCTGC CGAT GCAGCCGCCCTCC        TTTTGTTATGCGTGA 100 45
MTP40_RS11590 NONE
MTP40_RS11595 2426390 .. 2426409 +  -4.2  -4.55287   GCGAACTGTAAGCCC            GACACCGCC CCG GGCAG-GTC            TTTTCTCTCACTCAG  68 30
MTP40_RS11605 2428028 .. 2428065 + -11.9  -4.82901   ATATCACAGAAAACA   GGCAGCCCTCTCCCCCC GAAC GAGCAGAGAGGGTTGCC    TTTTTATGAGGAGAG 100 55
MTP40_RS11610 2428774 .. 2428799 + -18.3  -5.08824   TTTTTACAATTTTCA         GAGCGCTGCCC AGCC GGGCGGCGCTC          TTTTTTGCCTGCCGC 100 105
MTP40_RS11615 2430644 .. 2430675 +    -8  -5.24129   TCAAATTACATATCA      GGGGCATCG-TCC ACCCGTA GGCCCGATGCCCC      TTTTTTCTCAGGCAC  93 60
MTP40_RS11620 NONE
MTP40_RS11625 2432613 .. 2432645 + -27.9   -3.7941   CTTTCGATGAATAAG      CAACGCCCCCTGTGC GCA GCACAGGGGGCGTTG      TTCTTATCCGCGGTG 100 69
MTP40_RS11635 NONE
MTP40_RS11640 2436281 .. 2436332 + -13.9   -5.4505   GTAATACACGACACA G-CAAAAAGCGAACCGCCATGGTG ACAGA TGCCATGGCGGTTCGCTTTTACAC TTTTTTCTTCGAGCA 100 37
MTP40_RS11665 2440031 .. 2440080 + -19.5  -4.10925   CACCTCCACAACATG AAAAATGACCCTTTCCGCCACGC CGAC GCATGACGGAAAGGGTCATTTTC TTTTAAGAGATATGT 100 25
MTP40_RS11690 NONE
MTP40_RS11695 NONE
MTP40_RS11700 NONE
MTP40_RS11705 NONE
MTP40_RS11710 2450699 .. 2450731 + -14.2  -5.52079   GGACAAAACAAAAAT      CGGGGCACTCAGGT GGTCA AGCTGAGTGTCCCG      TTTTTGTTTTCATCT 100 82
        pflB NONE
        pflA 2454455 .. 2454467 +  -4.7  -3.48924   ATACACCCTTTTGCG                CTCGG CAT CCGTG                TTCTCTGCCAGCTGC  53 210
MTP40_RS11870 NONE
MTP40_RS11875 2487435 .. 2487480 + -22.8  -4.96657   ACATTTCCCCCTATA C-AACAGGCCGCCGTGCAGGA TCATC TCCTGCACGGCGGCCTCTTTG TTTTATTCTGTTTCT 100 40
        hisS 2494745 .. 2494780 +   -22  -4.38712   CAACAGCATATACAA    CAAAGCCCTCTCGGTC GATT GGCCGGGAGGGCTTTG     TTTTGTGCGGGTCAA 100 168
MTP40_RS11925 2499664 .. 2499674 +  -2.4  -4.56597   GACGTTGAAAACTAT                 CTGG ACA CCTG                 TTTTTGAGGGAGGGA  63 8
MTP40_RS11930 2500207 .. 2500222 +  -3.9  -2.62184   GGCTTTGCCCTTGGG              GCCGC CGGAAT GTGGC               TGCTGTGACCCCAGA  44 2
MTP40_RS11935 2500431 .. 2500446 +  -2.4   -2.6062   GTGGGCCGGGGGTTC              GAGTCC CTTC GGGCGC               ATATTATGTGGTGCC  39 8
MTP40_RS11940 2500533 .. 2500580 + -17.2   -4.0896   CCCACAAGGCACCCT GCTAGGAATTAGACCGGAAGCC GAAA GGTTTCCGGTCTGATTTTTTGC TTTTCCGGCCCATTT 100 27
MTP40_RS11945 2500827 .. 2500866 +  -9.5  -5.04377   CGCACCAAACCATGA  AAATCCGAACCTTTTCTC GATAG GAGAAG-GGTTCGGATTG  TTTATTTTATTTTGA 100 34
MTP40_RS11950 NONE
MTP40_RS11955 2503191 .. 2503222 + -11.6  -4.62471   CAAATTAGGTAAAAA      GGCGGTGTGATATT TATT ATTAGCACACCGCC       TTTTTACCGGTTCAC 100 50
        tnpA 2504247 .. 2504293 + -19.8  -4.96848   GACCCGTTTGAACTG CACCCCATTTGTTAGACAGTAT GGT ATACTGTTTAGGAAATGGGGTG TTTTTGTATGCCAAA 100 11
MTP40_RS11965 NONE
MTP40_RS11970 2505542 .. 2505555 +  -2.3  -3.64703   GTTCATATCACAGTG               TGGGC AGCG GCCAA                TTTCCGTGCGCAGGC  51 65
MTP40_RS12105 NONE
MTP40_RS12110 NONE
MTP40_RS12115 NONE
MTP40_RS12120 2534708 .. 2534750 + -21.5  -4.41114   TTTCTCCTTCATCAA TACAGCCCCGCTTTGGC TTCTCCTTC GCCAAAGCGGGGCTGTG TTTGTTATGTCATGG 100 57
MTP40_RS12145 2541608 .. 2541648 + -13.9  -4.13561   GGGGCCGTGCTGTCT  GACCGGCCAAGGCCCGCCA CTG TGCGGGGGATTGGCCGGTC  TCTTTTTTGAACACC  95 132
        ugpC 2543679 .. 2543704 + -16.9  -4.52589   TCCTAATAAGCAAAA         GCCGCCGGGAA GCGA TTTCCGGCGGC          TTTTGTCTAAGAGAA 100 67
MTP40_RS12160 2544068 .. 2544095 + -20.6  -4.56597   CGAGAGGATAGAAAA        GCACCCGCGGCC TGCT GGCTGCGGGTGC         TTTTTCCGAAGGAGA 100 44
MTP40_RS12185 2551503 .. 2551538 + -16.3  -5.04733   TTGTAGAATTGTAAA    GCTCCCGTTTTTCAG CTTTTT CTGAGAAGCGGGAGC     TTTTGTTTGTGATTC 100 57
MTP40_RS12190 2553357 .. 2553384 + -13.4  -4.20354   AAACCATTCAAAAAA        TGCCGCCGCACG AATT TGTGCGACGGCA         TTTTCAGCTTCAATT 100 39
MTP40_RS12230 2562417 .. 2562432 +  -7.5  -2.72511   ACCTCTCCCCTGCCA              GCCCC CGCAAA GGGGC               CTTTGCGCCAATCCC  56 43
MTP40_RS12235 2562625 .. 2562666 +  -5.9  -5.72622   GTCCACCATACAGTT CGTACTCGAACCCGATT CTTTATGA AAAAGGGTTTGGGTACG  TTTTTTGTTTATCGG 100 33
MTP40_RS12240 2563657 .. 2563673 +  -6.7  -3.85698   CCAAAGGGGCAAGAA              TTTTCAA GAA TTGAAAA              TTTGTGGCCACGGGA  66 106
MTP40_RS12245 2565294 .. 2565321 + -16.4  -5.10933   CTCCACCAAACGTAA        GGCCGTTTACCT GAAA AGGTAAGCGGCC         TTTTCTTTTGGGTAG 100 12
        tnpA 2566064 .. 2566082 +   -16  -4.38637   TAGGGCTTACTCAAG             CCACCGGC TCA GCCGGTGG             TTTTGACTTCTTCTT 100 138
MTP40_RS12335 NONE
MTP40_RS12340 NONE
MTP40_RS12345 NONE
MTP40_RS12350 2588054 .. 2588091 + -19.9  -5.27923   ATAAGAAAAAGCAAA   GCACCTCCGCTGCTGGC AAAC GCCAGTGGCAGAGGTGC    TTTTTTGTCCCCTTG 100 49
MTP40_RS12365 NONE
MTP40_RS12370 2595487 .. 2595517 +   -17  -5.17054   CGGCAAGCAAAAAAA       GCTCTTGGCCTTTA ATA TAGGGGCCAAGAGC       TTTTTTACATCTTGT 100 79
MTP40_RS12375 NONE
MTP40_RS12380 NONE
MTP40_RS12385 NONE
MTP40_RS12390 2600468 .. 2600481 +  -2.5    -3.322   TTAATAAAGATAGAA               TATAT TCTA ATATA                TTGCTATATAGAAGT  45 42
MTP40_RS12395 2601799 .. 2601834 +  -8.3  -5.47159   CATACAGTTCGTACC    CGAACCCGATTCTTT ACGAAA AAAGGTTCGGGTACG     TTTTTGTTTATTGAA 100 165
MTP40_RS12405 2602937 .. 2602980 + -17.7  -3.69333   CAGAGCGATAAACAA GC-AAAGGCAGGGTATCATC ATTAC GGTGGTACCCTGCCTTTTGC TTTGCATCCCTTATA 100 194
MTP40_RS12410 NONE
MTP40_RS12415 NONE
MTP40_RS12420 NONE
MTP40_RS12425 2605932 .. 2605964 + -23.7  -4.47259   CGGTAAACGAACAAA      GGCAGGGTATCATCA CGG TGATGATACCCTGCC      TTTTGATATTATAGT 100 165
MTP40_RS12435 2608148 .. 2608162 +  -8.5  -4.56597   GTGGAGGATCTGCTG               GCGGC ATAAG GCCGC               TTTTTGCGGGAGGAG  83 17
MTP40_RS12440 2608587 .. 2608619 + -18.6  -3.73775   AGGAACCAATAAACG     CACGAAAGCCCCGGC CGGA GCCGGGGCTTTC-TG      TTTGCTGCAAATGCC 100 63
        acpP NONE
        accD NONE
MTP40_RS12465 NONE
MTP40_RS12470 2615370 .. 2615388 + -10.2  -2.71712   TCACCTTCGGTGACA             GCTCCCCC AAA GTGGGAGC             CTTTGGCAAAACCGA  69 75
MTP40_RS12475 NONE
MTP40_RS12480 NONE
MTP40_RS12485 NONE
        fabG NONE
        fabF NONE
        fabZ 2620952 .. 2620984 + -15.7  -4.35339   ATATCATATATAAAA      GGCAGGATACCATCG CCA TGATGATATCCTGCC      TTTGTTCGTTCCTGT 100 73
MTP40_RS12510 2621502 .. 2621527 + -16.9  -4.18018   AAGCACTGACTGCAA         TGCCCCCGGAT GGCT GTCCGGGGGCA          TTTTGCGTCACAGGG 100 32
MTP40_RS12525 2622853 .. 2622864 +  -2.2   -4.0162   GGGCAGAGCCGTGGG                CTTC TGCA GAGG                 TTTATAATATGAGCA  55 7
        tsaA NONE
MTP40_RS12535 2624469 .. 2624518 + -13.9  -5.10004   GACAGCGATAAAAAA CAAGCCTTTCCGT-TGGTGTCAC ACTGAG GTG-CACCACACGGAAAGGCTTA TTTTTCGTTATTTTT 100 42
         fba 2642491 .. 2642527 + -23.9  -5.60993   CCCCATAAATGATAT    TGCCCCGCTGTTCTGTG CAT CACAAAACAGCGGGGCA    TTTTTTTGTAAGCCA 100 71
MTP40_RS12625 2647637 .. 2647669 + -12.6  -4.43477   TGTTTTTTAAAGGGG     CCGCGCCGC-CCGGC TTCT GCCGGAGATGCGCGG      TTTTCATTGCCTGCA 100 213
MTP40_RS12645 2653605 .. 2653650 + -13.1  -3.95584   TGCTTTTTGAAATCC GAGGGCAGGTGCCTGATGCCG AATT CGGCTTCAAGCTCCTGCCCGA TTTGATTGATGCGGG  91 208
MTP40_RS12655 2654575 .. 2654613 +  -2.2  -4.08945   GGTACAGATTCCCAA   GGTGGCGTATCCCGGGCA AGG TGCACGGAAAAGGCTGTC   TTTTGAAAAAATGAT  55 161
MTP40_RS12660 NONE
MTP40_RS12665 2657009 .. 2657034 + -19.1  -5.61881   CCACATAGTAAAAAA         GAAGCCCCGAC GAAT GTCGGGGCTTC          TTTTTGTTTTTCAGC 100 152
MTP40_RS14445 2663854 .. 2663888 + -20.1  -4.93318   TTCTCTGACACAAAA    GCCCCCGGAAAGCGGT TCGC GCCGCTT-CCGGGGGC     TTTTTATGCGTTATG 100 46
        nrdD 2687077 .. 2687096 +   -15  -4.98522   CGCTTCGCATTGACA            GCTCCCCC GAGA GGGGGAGC             TTTTTATATGGAGTT 100 54
        nrdG 2687686 .. 2687733 + -26.5  -4.13282   GAAAACCGCAAATAA CCAGAAATGCCGCCCTGAGCT TTTTAC GGCTCAGGGCGGCATTTCCGG TTTTGGGAATATAAT 100 42
MTP40_RS12830 NONE
MTP40_RS12835 2695010 .. 2695041 + -18.1  -4.39414   TTATACACTACAAAA      GCCGCTGCACAGT TGTTAC GCTGTGCAGCGGC       TTTCTGTTTGCTCTT 100 103
MTP40_RS12895 2706692 .. 2706733 +  -9.5  -5.72622   GTCCACCATACAGTT CGTACTCGAACCCGATT CTTTACGA AAAAGGGTTCGGGTACG  TTTTTTGTTTATCGG 100 33
MTP40_RS12900 2707971 .. 2708011 +  -9.2  -5.42605   AAGAACTTTTTTCTT CTGAA--GTGGTGGTGTTCA CGA TGAGCACCACCACTTTTCCG TTTTGTTTTTCTTGC 100 252
MTP40_RS12905 NONE
MTP40_RS12910 2710038 .. 2710065 + -16.4  -4.32857   ACACGATAAGTAAGG        CAGGGAGTTCCC CCAC GGGAACTTCCTG         TTTCTCTTTGCCGGA 100 89
MTP40_RS12985 2729047 .. 2729078 + -17.4  -4.37502   TACCTGATAAAAAAG      GGGTTGCTGCACAA ACCT TCGTGCAGCAACCC       TTTTACTATGGTACT 100 34
MTP40_RS12995 NONE
MTP40_RS13000 2732595 .. 2732627 + -18.7  -3.35197   ATCGTTACGGGGTGA      TGGTGGTGGTTATCA CCG TGATAACCACCACTA      TTCATATGTATCGAC 100 26
MTP40_RS13005 2734372 .. 2734404 + -15.7  -5.07652   CGGTAAACGAGCAAA      GGCAGGGTATCATCG TGG TGATGGTATCCTGCC      TTTTGTTTTGCGGGA 100 35
MTP40_RS13010 NONE
MTP40_RS13015 2735662 .. 2735678 +  -4.5  -3.85698   CGGAAGGGCACAACA              TTTTCAA GAA TTGAGAA              TTTGTGGCCACGGGA  59 149
MTP40_RS13020 2736017 .. 2736042 + -14.1  -5.50723   TCCACTCGTGAAAAA         GAACCATCGAC TTCG GTCGGTGGTTC          TTTTTGTTTTGCTGG 100 65
MTP40_RS13025 2736742 .. 2736767 + -14.1  -5.50723   TCCACCCGGGGACAA         GAACCATCGAC TTCG GTCGGTGGTTC          TTTTTGTTTTGCTGG 100 159
MTP40_RS13030 2737678 .. 2737703 +  -9.8  -5.50723   TCCACCCGGGGACAA         GAACCATCGA CTTCAA TCGGTGGTTC          TTTTTGTTTTGCTGG 100 250
MTP40_RS13035 NONE
MTP40_RS13040 2738502 .. 2738514 + -10.5  -4.07568   AGCGAAGCAATGAAA                GCCCC AGT GGGGC                TTTTAAGCGGCAGCG  85 102
MTP40_RS13045 2738987 .. 2739025 + -14.9  -4.27192   CCCCTGCTCCACCCG  CAGAAAAGAACCATCGAC TTCG GTCGGTGGTTCTTTT-TG   TTTTGCTGGCGCTTT 100 58
MTP40_RS13050 2740713 .. 2740738 + -14.1  -5.50723   TCCACCCGGGGACAA         GAACCATCGAC TTCG GTCGGTGGTTC          TTTTTGTTTTGCTGG 100 317
MTP40_RS13055 2741315 .. 2741353 + -23.1  -3.87149   TTCCTACAAAAAGCA   GCGCCCCCGCCTGCCGG AAACA CCGGTGAGCGGGGGCGC   TTTGCATTTGCTGGG 100 43
MTP40_RS13095 NONE
        asnA 2753225 .. 2753252 + -17.1   -5.1287   CAAAACACGAGAAAA        GGCTCTCTGCC AAAACC GGCAGAGAGCC         TTTTTTGCATCTCAG 100 42
MTP40_RS13340 2787496 .. 2787507 +    -3  -4.81249   ACGAAATAGCAAAAT                TTTC TCCT GAAA                 TTTTTACATTTCCAC  68 32
MTP40_RS13345 2788943 .. 2788969 + -16.5  -5.02323   AAATAATGCTTTTCC         CGCCCGGCTGG TCTGT CCCGCCGGGCG         TTTTATTTCTCATCG 100 35
MTP40_RS13350 NONE
MTP40_RS13355 NONE
MTP40_RS13360 2792455 .. 2792509 + -10.7  -4.63218   TAACAAAGTCGATTT TGGGCTTTCGCACAGGGACCCCC CTGCCTTTT GGGGTTATCTGTACGAAGGCCCG TTTTATTACAGGAAA 100 86
MTP40_RS13365 NONE
MTP40_RS13370 2794476 .. 2794526 + -19.8  -2.75535   CAGATAAGGATCATA CAAAACAACAGCCCCCTCGGGTCA TAA TAGCCTGAGGGGGCTGTTGCTCTG TAATTCAGCTGTTAC 100 34
         udk 2797596 .. 2797623 + -21.4  -5.01535   TATGATACCAAAAAA        GGGGTGGTTCCC GACC GGGAACCACCCC         TTTTTATGATTCTGC 100 59
MTP40_RS13410 NONE
MTP40_RS13415 2801073 .. 2801096 + -14.6  -5.26119   TACCCCTGCCACAAA          CCTCCGGAGC AGCC GTTCCGGAGG           TTTTGTTTTTGCGCA 100 30
MTP40_RS13420 NONE
MTP40_RS13425 2801517 .. 2801544 +   -10  -5.64421   AGCTCCATTGAAAAA        CCACTTGAAGTCT TAG AG-CTTCAGGTGG        TTTTTTGTTTACCAT 100 34
MTP40_RS13430 2803009 .. 2803049 + -17.7  -3.74251   ACCTCTTTCCCATAA  CAGCAAAGCCGCAAGCC CTCAACA GGCCTGCGGCTTTGTTG  TTTGATGGACCTCTC 100 69
MTP40_RS13455 NONE
MTP40_RS13460 NONE
MTP40_RS13465 NONE
MTP40_RS13470 NONE
MTP40_RS13475 NONE
MTP40_RS13480 2810617 .. 2810652 + -13.4   -5.5353   AAGTAAACCAAAAAA    CGACCCTCTCCG GGAATTGCAATG CGGAGAGGGTCG     TTTTTTCTTAATATC 100 35
MTP40_RS13495 NONE
MTP40_RS13500 2814880 .. 2814913 +  -8.9  -5.28176   CTAAACCCGAATTTT     GCCCGGTGCACTGAAA TGG TGTCAGTG-ACCGGGA     TTTTTTATGCGTCAG 100 352
MTP40_RS13505 2816319 .. 2816355 + -20.9  -5.10968   TTGATCGTGTGTGCA    AAGAACCGCCGCCCGAA ATT TCCGGGCGGCGGTTCTG    TTTTTGTGTGTTCGT 100 89
        gltX NONE
MTP40_RS13525 NONE
MTP40_RS13530 2820024 .. 2820043 + -10.7  -5.14563   GAACATTGCAAAAGA            TCCCCGC CGGAAA GCGGGGA             TTTTTTCATGCCGGA 100 118
MTP40_RS13535 NONE
MTP40_RS13540 NONE
MTP40_RS13545 2823516 .. 2823558 +   -20  -4.55209   AGATGCTTAAAAAGA GCGACCCTCTCCGTCATT GTTTCGG AATGACGGGGAGGGCCGC TTTATTTGGTATCTG 100 31
MTP40_RS13560 NONE
MTP40_RS13565 NONE
MTP40_RS13570 NONE
MTP40_RS13575 2830585 .. 2830596 +  -5.8  -3.28712   TGGAACCAGCTGCCC                GGTG AGGA CACC                 TTATAACAGGAGAAC  57 8
MTP40_RS13580 2831216 .. 2831245 + -14.3  -5.18726   TTGCAACAACAAAAA       GCGGGACCGCTGA GTTT TCAACGGTTCCGC        TTTTTGTTGTGGAAA 100 41
MTP40_RS13650 2840400 .. 2840414 +  -4.3  -3.05384   AAGAAAAAAATTCGT               CAAGA ATCAA TCTTG               TTGCGTACCGGGAAA  47 42
MTP40_RS13655 2841084 .. 2841113 + -23.7  -4.93296   TAAGAAACGATAAAA       GCGTCCCACAGGG GGCT CCCTGTGGGACGC        TTTTTGTAATGCTGA 100 38
MTP40_RS13660 2841665 .. 2841683 + -14.6  -3.08522   GGCTTTGCCGTGCCA             GCTCCCTC GGA GAGGGAGC             CTTTTAGCCTCCCTC  91 54
MTP40_RS13670 NONE
MTP40_RS13675 2845512 .. 2845544 + -13.6  -5.28942   TCCAAGCATAAAAAA      TGGAGCTGTTACAC ATCTC GTGTAACAACTCCA      TTTTTGTTTAGCGTG 100 42
MTP40_RS13715 2855584 .. 2855636 + -15.1  -4.55798   AGAAGCGATAAAGAA TGACCCTCTCCATCC-CGCA-TCTG ACAGA CAGACTGCATGGACGGAGAGGGTCA TTTTCGTTTCAGATA 100 30
MTP40_RS13725 2858374 .. 2858394 +    -9  -3.53012   TCAAACCGGCTGACG            GTGCCGGA ATAGA TCCGGTAC            TTTGCCCGCCAGGCG  71 344
MTP40_RS13735 2860343 .. 2860393 + -11.3  -4.34402   CTCAACATGATATGC TGCCCCTAGAGTAGACAGAGT AAAAAGAAA ACTCTGCGTACTCTGGGGGTA TTTTCATGTCAAGCA  91 90
MTP40_RS13765 NONE
MTP40_RS13770 2865674 .. 2865709 + -13.2  -4.19177   TTTCAGAAACCAAAA    GGCCGCCTCCTCGGAA TTTG TTCCGTGAAAGCGGCC     TTTCTGTTACAAGAT 100 85
MTP40_RS13780 2867605 .. 2867631 + -19.5  -5.00616   AACAGTGTAACATAA         CGGGCCGGTGT GCGCA ACACCGGCCCG         TTTTTTGCCGCCCGG 100 43
MTP40_RS13785 2869289 .. 2869300 +    -3  -2.87564   TCACTTTTCTTCACC                TTTC GCCT GAAA                 TCTCTCCACCGGTGA  42 42
MTP40_RS13790 2870772 .. 2870825 + -15.5  -4.40561   TGTGACCCTGTTTTC TGCACGCAAAAAGCCCCCGGCCTGT ATCCTC ACAGGCCGGGGGCTTTT--CGATCA TTCTTTTTCAAACAC 100 36
        ychF 2884235 .. 2884263 + -24.7  -4.07568   TGATGTATGATAAAA        GTGTCTCCCGCGC GGC GCGCGGGAGACAC        TTTTGCCCGGGAGAA 100 38
MTP40_RS13855 2885433 .. 2885480 + -16.5  -2.59927   TCTGATTTTCCATAC AAAAATCCCCCTTTGTGGCAC TAGCTT GTACCGCAAAGGGGGATTTTA TGCATTCGGTTTATT 100 485
MTP40_RS13875 2889372 .. 2889390 + -14.6  -2.75343   TGCTTCGCAAAGCCA             CCTCTCCC AAA GGGAGAGG             CTTTGGCAGTGTGGA  90 63
        trmB NONE
MTP40_RS13885 2891333 .. 2891364 + -18.1  -5.08601   TGCAGCAACCCCAAA      TGCCCCTGACCGG CTTCTT TCGGTCAGGGGCA       TTTTTCTTGCACTGC 100 51
MTP40_RS13890 2894636 .. 2894677 + -23.2  -3.49777   ATATTCCCAAATATA CGTAGAAGCGCCTCATCC TTTACC GGATGGGGCGCTTCTGCG  TTGTAATGTGTCGAA 100 53
MTP40_RS13900 2896905 .. 2896924 +  -2.8  -3.09749   GGGCTGATGGCCGCT            TGA-CAGCG CAC CGCCGCTCA            TGTATCTTAGAGGTA  45 34
MTP40_RS13905 2897645 .. 2897662 +  -3.3  -3.96148   CCAAACACATCCTGC             TCACCCT GAAA AGGGCGG              TTTATGATACGAAAC  55 70
MTP40_RS13910 2898218 .. 2898247 + -17.9  -4.90471   GCCATCGAAAGCAAA       GGCGCTGACGGAA GTGA TTCCGCCAGCGCC        TTTTGTGTTTTCGCT 100 140
MTP40_RS13915 2900197 .. 2900227 +   -17  -4.11281   ATCCATTTGGCAGAA       CCCCTGCTTCCT CCGCACA AGGAAGCAGGGG       TTTGTCGTTGTCATC 100 124
MTP40_RS13920 2901920 .. 2901955 + -14.8  -5.49568   GCGTGAAATCTTCAG    GCGCTTCATCCCGT AAATTTGA GCGGGATGGAGCGC     TTTTTGTTTTAACTT 100 322
        thrS 2903921 .. 2903979 + -20.6   -5.1287   TTTGCAGATTTGAAA -CGTTAAATGAACAGCGCCGCTTTCCC ATGACC GGGAGAGCGGCGCTGTTCGTTTACTGA TTTTTTCGGTCTGCC 100 165
        pckA 2908773 .. 2908813 + -16.9  -4.45168   ACTCCATATAAAATA  TCCCCCACCGCCTGTCC ATTGACC GAACAGGCAGTGGGGGA  TTTGTGTTTTGGAGC 100 68
MTP40_RS13955 2909566 .. 2909603 + -18.5  -2.94726   GATCAACTGAAAAAA   GAAAGCCCTCCCATCGC ACAA GCGAAAGGAGGGCTTTC    TATCATCTTATCAGA 100 31
MTP40_RS13975 2915282 .. 2915325 + -23.4  -2.85346   CGGAAATGACCCAGA CAGAAAAAGGACGCTGTGCC CTGC GGCACAGCGTCCTTTTATTG CTTTGCTCAGCTCTT 100 32
MTP40_RS14080 2934803 .. 2934831 + -13.2   -4.2349   CAGAACACCAAAAAA        GCAAGGTCGCTT TATGC AGGCGGCCTTGC        TTTTCCGTGTCAGGA 100 53
MTP40_RS14085 NONE
MTP40_RS14090 NONE
MTP40_RS14095 2937335 .. 2937369 + -18.6   -4.1899   ATCTGAGCTAAAAAA     GGAGGCTGCCGCACGG TAT TTGTGCAGCAGCCTCC     TTTTGGCTGGGATGA 100 35
MTP40_RS14105 NONE
MTP40_RS14110 2939578 .. 2939625 + -29.6  -3.87815   AAACGTGGGAATAAA TAACAATCAAGAGGGCGGCAAC AAAA GTTGTCGCCCTCTTGATTGTTA TTTATAGAAATACAA 100 27
MTP40_RS14115 2940857 .. 2940870 +  -3.7  -2.64794   AGGGCGGAAAGCATC               CGCGC CCTT GCGCC                TGATATGAAATTGGA  42 86
MTP40_RS14120 2941592 .. 2941625 +  -6.7   -4.9645   AAAGAATACAAAAAA     TCCGAACCCTTCTCC TATT GGAAAAAAGTTCGGA      TTTTGTTGTTGTGGT  83 389
MTP40_RS14150 NONE
MTP40_RS14155 2949419 .. 2949446 + -13.4  -4.63932   GGCCACAAAGAAAAA        TCCCCGGCGCAC TTTT GTGTACCGGGGA         TTTTATTAACACATG 100 55
MTP40_RS14165 2951144 .. 2951167 + -11.8  -6.07374   GCTGTAAAACAAAAA          GATGGATGTC GTGC GGCATCCATC           TTTTTTGTTTTTTCT 100 34
MTP40_RS14200 2959042 .. 2959074 + -19.4  -3.73122   AGTTTACATTCTGAA      CAAAGAAAGGACCC GCCGA GGGTCCTTTCTTTG      TTTGCGGTTATTCTG 100 27
MTP40_RS14245 2968766 .. 2968807 + -15.3  -4.52589   CGCTCCCTTACAAAA CACAACAGCCCCCGGAAC ATGCAGG GTTCCGGGGGCT-TCGTG TTTTGTATCGGGGGG 100 41
MTP40_RS14255 2971466 .. 2971478 +  -7.7  -4.20516   CCAGCAAGGAGTTTG                CCTGA TTT TCAGG                TTTGTTGGATACAAC  75 21
MTP40_RS14260 2972935 .. 2972971 + -18.8  -5.24129   AGTTTCCGTATATCC    GGCCCTCTCCGCCA TTGCAGTTT TGGCGGGGAGGGCC    TTTTTTGTGCAGGAA 100 40
MTP40_RS14265 2973861 .. 2973884 + -16.8  -5.46698   TCCACATAGAAAAAA          CGCCTCTGTC GGCC GACAGAGGCG           TTTTTTCATTTTGGG 100 42
MTP40_RS14295 2980465 .. 2980487 + -16.4  -5.09762   CAAGAGACATAAAAA           TAAGCCCGAC GTT GTCGGGCTTA           TTTTTATGTTCAGAT 100 63
MTP40_RS14310 2983329 .. 2983370 +  -2.9  -2.82516   TCCCCTAGTAGGGGA GCCCTTGGCAAATGCGTAA AGCT TTACCTGACTGCCAAGGCC  TCTCCTACTAGGAGA  42 78
MTP40_RS14315 NONE
MTP40_RS14320 NONE
MTP40_RS14325 2985953 .. 2985970 +  -9.1  -2.73364   GCCGATCGGCGACAG             CTCTCCC AATA GGGGGAG              TCCTTGGCATAGAGA  63 52
MTP40_RS14330 2986682 .. 2986724 + -16.5  -5.27335   GAACACATTAAAGGA ACGACCCTCTCCGGTGCTGTG AAG CACAG-AC-GGAGAGGGTCGA TTTTTATTTGCAGAC 100 30
MTP40_RS14335 2987506 .. 2987535 + -12.3  -5.02074   GAATGATTTATGCAA       GACGCTGTAAC TTTTTTCT GTTACAGCGTC        TTTTTTACGCCATGG 100 35
MTP40_RS14340 NONE
MTP40_RS14345 2987904 .. 2987927 + -10.4  -6.01725   ACGGGTCACCAAAAA          GCTTCTGATT GAAA AATCAGGAGC           TTTTTTCTTTTTGTT 100 30
        rpmH 3001471 .. 3001495 -    -5   -5.4593   CCAAAATAAGAAAAA          GACCGCCAAT TCTGG ATCAGCAGTC          TTTTGTGCGCATGTT  85 73
        rnpA NONE
        yidD 3000520 .. 3000538 - -14.6  -2.74263   ATCGGACTGCCAAAG             CCTCCCCT ACC AGGGGAGG             TGGCATTGCGAAGCA  90 88
MTP40_RS14400 NONE
MTP40_RS14395 2998073 .. 2998103 - -19.1  -5.14985   GGAAAGAGACAAAAA       GCCCCCTTCCAGT TTTCC ACCGGAAGGGGGC       AGCATTGTGCAAAAC 100 51
        mnmE 2996606 .. 2996622 -    -5  -3.96148   GTGTCCGAGGAGAAA              GCTGCC AGACG GGCTGC              CCTCCGTTACTTTCC  59 32
        mnmG NONE
        rsmG 2993680 .. 2993708 - -11.1  -5.05505   ACCAGAAATCAAAAA       GCCCTGCCAGAA GAATCG TTC-GGCAGGGC        TTGGCATTTATCTTG 100 51
MTP40_RS14375 2992691 .. 2992702 -  -3.6   -2.8789   TTAAAGACTAGTATA                GCAC ATCA GCGC                 GGCTTTTTGAACCTG  43 105
MTP40_RS14365 2990729 .. 2990741 -  -6.2  -3.53811   CCCATGCCGTTCAAA                GGCG GCGTG CGCC                TTAGATCGCTATGTT  59 148
        serS 2989221 .. 2989267 - -19.8  -4.96848   TTTGGCATACAAAAA CACCCCATTTCCTAAACAGTAT ACC ATACTGTCTAACAAATGGGGTG CAGTTCACACGCGGA 100 89
MTP40_RS14355 NONE
MTP40_RS14350 2987904 .. 2987927 -  -8.2   -4.7254   ACGGGTCACCAAAAA          GCTTCTGATT GAAA AATCAGGAGC           TTTTTTCTTTTTGTT  88 110
MTP40_RS14305 2981743 .. 2981760 -  -8.3  -5.02074   CCAGGGCGCAAAAAA             GCCGCTC GGAC GGGCGGC              TGGGGTGTTCGGGAG  93 45
MTP40_RS14300 2980453 .. 2980498 - -23.1  -3.17075   TGCCCCTGAATGCAA GAGACATAAAAATAAGCCCGAC GTT GTCGGGCTTATTTTTATGT-TC AGATCTTCTTCAGGG 100 24
MTP40_RS14290 2978044 .. 2978058 -  -2.7   -2.9652   CAAAATGCAATCACA               CCGGG GCCAT CTCGG               CAAGCTGCTGTTCAA  43 6
MTP40_RS14285 NONE
      gluQRS 2975443 .. 2975477 - -11.7  -4.56978   TTTGTAAACAATAAA    CCACAATCTTT-ACCG TTTC CAGTGAAAGATTGTGG     TTTTGCTTAAAACAG 100 32
MTP40_RS14275 2974945 .. 2974955 -  -2.4  -3.75332   ATTTCCGAACGGAAA                 GGTC CCG GTCC                 CAGATTCAAAGAGCT  50 125
MTP40_RS14270 2973861 .. 2973884 - -16.8   -5.4251   TCCACATAGAAAAAA          CGCCTCTGTC GGCC GACAGAGGCG           TTTTTTCATTTTGGG 100 44
MTP40_RS14250 2968766 .. 2968807 - -17.5  -4.36914   CGCTCCCTTACAAAA CACAACAGCCCCCGGAAC ATGCAGG GTTCCGGGGGCT-TCGTG TTTTGTATCGGGGGG 100 41
MTP40_RS14240 2967210 .. 2967245 - -14.6  -5.63517   TGTGCAAATAAAAAA    GCCCCGGAGGGCGGCC TTTC AGCCACGCTCCGGGGA     AAAATCATATAATTT 100 48
MTP40_RS14235 2966465 .. 2966500 - -14.6  -4.70659   CTCCAGACGCAAAAA    GCCCCGGAGGGCGGCA GGGG TTCCGCGCTCCGGGGT     ATGCTCAAGAAAATT 100 65
MTP40_RS14230 2966142 .. 2966168 -   -13  -5.27938   AGTTGCAAACAAAAA         GCCCGTCCGG AGCAAAA CCGGACGAGC         CTGTTTTTCTTCTCA 100 38
MTP40_RS14225 NONE
MTP40_RS14220 NONE
MTP40_RS14215 NONE
MTP40_RS14210 NONE
MTP40_RS14205 2959046 .. 2959070 - -14.4  -4.17556   TACATTCTGAACAAA          GAAAGGACCC GCCGA GGGTCCTTTC          TTTGTTTGCGGTTAT 100 37
MTP40_RS14195 2957201 .. 2957211 -  -5.4  -3.54489   TCAATTCCAAAGGAA                 GCAA CCT TTGC                 CGTGCCTTAGCCGGA  56 49
MTP40_RS14190 NONE
MTP40_RS14185 2955342 .. 2955382 - -32.1  -3.28712   TGTTTCTCTGCACAA  GCAAAAGCCGCCTGCCGGA CGG CCCGGCAGGCGGCTTTTGC  GGTTGTGAATGGGTA 100 71
MTP40_RS14180 2953444 .. 2953483 - -10.7  -4.66163   ACTCTTAGCCAAAAA  CAGGAAACCGGCCGCTG AGCTGA CAGCGGCCGGTTTGTTT   TACTGAGAAATTGCC 100 53
MTP40_RS14175 2952284 .. 2952328 -  -7.9  -5.14645   ACAACGCAAGAAAAA CCCTCTCCATCAAAGC-GTG GCAGTG CACAGCGATGACAGAGAGGG TCAGTTTTACTGATA  90 32
MTP40_RS14170 2951144 .. 2951167 -  -9.6  -5.45802   GCTGTAAAACAAAAA          GATGGATGTC GTGC GGCATCCATC           TTTTTTGTTTTTTCT 100 42
MTP40_RS14160 2949419 .. 2949446 - -13.4  -5.38054   GGCCACAAAGAAAAA        TCCCCGGCGCAC TTTT GTGTACCGGGGA         TTTTATTAACACATG 100 38
MTP40_RS14145 2944835 .. 2944849 -    -5  -3.55444   GCTTGACCTTTCAAA               CGTTCT TTC AGAACA               TTTGGTATCCTCTTG  55 275
MTP40_RS14140 2941871 .. 2941888 -  -2.1  -3.18383   ATTGTCACCGACCAA             TATGACTG GTT CAGT-ATA             ACACTTCTGTTTTAC  43 130
         rrf 2941739 .. 2941759 -  -3.3  -3.34517   ATGCGGTTTCAAACA           TC-CCGAC ATTTGA GTCGGCGA            CTACCTATTTTCACG  48 17
MTP40_RS14130 2941592 .. 2941625 - -13.3  -5.57729   AAAGAATACAAAAAA     TCCGAACCCTTCTCC TATT GGAAAAAAGTTCGGA      TTTTGTTGTTGTGGT 100 37
MTP40_RS14125 2941115 .. 2941142 - -17.8  -5.33405   CCCAGCAAAGAAAAA        CAGAGCGTTCCC GACG GGGAACGCCCTG         TTGTACATATCGCTA 100 100
MTP40_RS14100 2937335 .. 2937369 - -19.4  -5.09225   ATCTGAGCTAAAAAA     GGAGGCTGCCGCAC GGTATTT GTGCAGCAGCCTCC     TTTTGGCTGGGATGA 100 51
MTP40_RS14075 NONE
MTP40_RS14070 NONE
MTP40_RS14065 NONE
MTP40_RS14060 NONE
MTP40_RS14055 NONE
MTP40_RS14050 NONE
MTP40_RS14045 NONE
MTP40_RS14040 NONE
MTP40_RS14035 2926013 .. 2926025 -  -3.3  -4.62336   AGCCTACCGCAAAAA                CACCG TGC CGACG                TTAGAGTGCTGCCCC  66 277
MTP40_RS14025 NONE
MTP40_RS14020 2923974 .. 2923996 -    -4  -3.05963   ATCCTTACCGTAATA           TTGCCATGCG TAC CGCCTGACAT           GATCGGGTGCGCATG  47 47
MTP40_RS14015 NONE
MTP40_RS14010 NONE
MTP40_RS14005 2919552 .. 2919590 - -13.1  -2.87344   GACCTCGCCCATATA   CGCACCGGTATAAACGC CCAGC GCGATGATGCCGGTGCG   GATCACGCCCAGGCT  81 40
MTP40_RS14450 NONE
MTP40_RS13995 2918259 .. 2918297 -   -26  -3.87869   GGAACGGGGCAGAAA   GCCCGCACCCGGCAGCCG TTT CAGCCGCCGGGCACGGGC   TTTCTGTGCATAAGG 100 84
MTP40_RS13990 2916809 .. 2916825 -  -2.1  -2.68823   TTCTCCTTACACAAC              TTGCAGC TCA GCAGCCA              AACAGTGCGGCAATG  39 16
MTP40_RS13985 NONE
MTP40_RS13980 2915290 .. 2915317 - -21.4  -5.04597   ACCCAGACAGAAAAA        GGACGCTGTGCC CTGC GGCACAGCGTCC         TTTTATTGCTTTGCT 100 40
MTP40_RS13970 2913233 .. 2913259 - -13.7  -4.27117   TTCGCATAACAGAAA         CGGGAGGTGCC GGTGG GGCATCTCCCG         TTTGTTTCAATGATA 100 32
MTP40_RS13965 2911356 .. 2911395 - -24.6  -3.96148   TGCGCCGAGCATAAA  GCAAGGGCCATTGCAC-GA GAA TCTGTGCAATGGCCCTTGC  TTTCTATTGTTTCTT 100 39
MTP40_RS13960 2909566 .. 2909603 - -20.7  -5.17576   GATCAACTGAAAAAA   GAAAGCCCTCCCATCGC ACAA GCGAAAGGAGGGCTTTC    TATCATCTTATCAGA 100 80
MTP40_RS13945 2906574 .. 2906586 -  -6.2  -4.55287   GGCATCTATATAAAA                CGGC ATACA GCCG                TTTTACTACTATAAA  75 42
MTP40_RS13940 2906459 .. 2906479 - -14.1  -6.01725   AACAAAAAGAAAAAA            GCGATGGAA CAT TTCCATCGC            TTTGCTGGCGCCTCT 100 31
        trpS 2905106 .. 2905142 - -15.2  -4.67353   GCAGCCACGCAAAAA   CCGCCTGCACCCA-GCA TAAT CGCATGGGCACAGGCGG    TTTTGTTTCTACCAT 100 44
MTP40_RS13930 2903928 .. 2903971 - -21.8  -3.71917   ATTTGAAACGTTAAA TGAACAGCGCCGCTTTCCCA TGAC CGGGAGAGCGGCGCTGTTCG TTTACTGATTTTTTC 100 27
MTP40_RS13895 2894634 .. 2894679 - -16.2  -3.38201   GAATATTCCCAAATA TACGTAGAAGCGCCTCATCC TTTACC GGATGGGGCGCTTCTGCGTT GTAATGTGTCGAATT 100 383
        malQ NONE
MTP40_RS13865 2885438 .. 2885475 - -16.4  -4.96848   TTTTCCATACAAAAA   TCCCCCTTTGTGGCAC TAGCTT GTACCGCAAAGGGGGA    TTTTATGCATTCGGT 100 41
MTP40_RS13860 2884671 .. 2884684 -  -3.8  -4.56597   GCCGCCGCTGAAAAA               GCCT GCGCCG AGGC                AGGGGTCAAGGCCCT  70 331
MTP40_RS13845 2881500 .. 2881522 -  -9.1  -5.05153   ACTCCAAAAAACAAA           TTCTCCGGC TGTCT GCCGGAGCA           GTATTTCCGAATCAA 100 134
MTP40_RS13840 NONE
MTP40_RS13835 2879203 .. 2879244 - -19.5   -5.0925   TTCCAAAACCAAAAA CGACCAGACCGCCCCGCCCG TTT CAGG-GGGACAGTCTGGCCG CGGATTCAGTTGACA 100 31
         rpe NONE
MTP40_RS13825 NONE
MTP40_RS13820 NONE
MTP40_RS13815 NONE
MTP40_RS13810 NONE
MTP40_RS13805 NONE
MTP40_RS13800 NONE
MTP40_RS13795 2870784 .. 2870815 - -23.8  -4.65895   TTCTGCACGCAAAAA      GCCCCCGGCCTGTA TCCT CACAGGCCGGGGGC       TTTTCGATCATTCTT 100 33
MTP40_RS13775 2865668 .. 2865715 - -17.8  -3.87815   TTCCATTTTCAGAAA CCAAAAGGCCGCCTCCTCGGAA TTTG TTCCGTGAAAGCGGCCTTTCTG TTACAAGATCAGATT 100 26
MTP40_RS13760 2864496 .. 2864510 -  -5.7  -5.13354   GGTATAAAAAAGAAA               GCCAT ACAGG ATGGC               TTTTCTTTTTCAGGC  85 55
MTP40_RS13755 NONE
MTP40_RS13750 NONE
MTP40_RS13745 2861248 .. 2861264 -  -2.1   -3.5936   TGTAAATTCGTCAAA              GTTCCGG GGC CGGGAGC              CTGCTTATTCCATCT  47 30
MTP40_RS13740 2860523 .. 2860550 - -16.4    -5.252   GATTTGCACAAAAAA        TTCGCCGTTCCC TTGT GGAAACGGCGAA         CAAAAATCTTATATT 100 105
MTP40_RS13730 2857907 .. 2857961 -  -2.6  -3.38812   TTCTGGCCAACAACA GCGCCCTCCCCCAC-GCCGAGGCCC TGCCCG GGGCGTGGGATGCAAAGGCGGGCAC TTACACGGTCACAGA  47 26
MTP40_RS13720 2855584 .. 2855636 - -19.5  -4.11906   AGAAGCGATAAAGAA TGACCCTCTCCATCC-CGCA-TCTG ACAGA CAGACTGCATGGACGGAGAGGGTCA TTTTCGTTTCAGATA 100 23
MTP40_RS13710 NONE
MTP40_RS13705 NONE
MTP40_RS13700 2850752 .. 2850771 -   -15  -5.60993   GGCCGCACAAAAAAA            GAGCCGCC CTGC GGCGGCTC             TCCTATATAATAGAT 100 40
        hrcA NONE
        grpE 2848801 .. 2848815 -    -5  -3.36327   TGATCTTACTCATAA               TGAAAG CTC CTCTCA               AATTCAGAACGTTTT  52 111
        dnaK 2846871 .. 2846913 - -14.8  -4.39426   CATACCTCTATAAAA CCAGCAAAGGCCGCCCCGGC AAA ACCGGAGCGGCTTTTGCTTT TATCCGGCACGCCTG 100 81
        dnaJ 2845588 .. 2845645 - -17.7  -3.53012   TCTTTGCTTCGCAAA TCCACCTCTCCCGAAGGGAGAGGCAAG TGCT CTTGGCTCCCCCTTTGGGGGAGCTGGC GAGCGTCAGCGAGAC 100 63
MTP40_RS13665 2841450 .. 2841475 -  -6.1   -3.5944   AGGCACACTGGTAAA         GGATGCCGCCCG GAA CGAG-GGCATTC         TGGAATGGGTGCCCA  58 290
MTP40_RS13645 2838750 .. 2838785 - -22.7  -5.46706   AGTGCAAAACAAAAA    GGCGGCTGCGCCTTC CTTTTT GAAAGCGCAGCCGCC     TGATTGCTCTTCGTT 100 59
MTP40_RS13640 NONE
MTP40_RS13635 2837614 .. 2837631 -  -5.6  -3.05844   CGGGGCACTTCAATA             CACTAC TTTATT GTAGTG              CAAACGCGGCAAAAA  51 54
MTP40_RS13630 2837209 .. 2837248 - -22.9  -5.00616   CTCCCTTCTAAAAAA  GCGCACCGCAGGGC-GGG TGCTC CCCTGCCCCGCGGCGCGC  GGTCCGTGTTATTCT 100 34
MTP40_RS13625 NONE
MTP40_RS13620 2835539 .. 2835558 -  -3.4  -3.48276   TTTCCTCTCACACAA            CAGGCATC CTTT GCGGCCTG             TCGTGCTGTTACTGC  50 200
MTP40_RS13615 2834953 .. 2834964 -  -7.2  -3.32844   GTTTTTATCCTACAA                CCGC GGGC GCGG                 GTGTATCCATGTACT  62 40
        tatA NONE
        tatC 2833824 .. 2833846 - -16.3  -4.54727   TTTGGCAAAGCAAAA           GGCCCTCCC GCAGT GGGAGGGCC           GGAAAGCCTTGGGAG 100 44
MTP40_RS13600 2832676 .. 2832712 -  -8.7  -5.54907   CTTATAAAATAAAAA    TCCCCATGCCCACAC GATTGAG ATGCGGGCATGGGAC    CATGAAATATCAGGT 100 42
MTP40_RS13595 2832042 .. 2832075 - -14.6  -5.36364   TCAAAAATAGAAAAA     GCCCCGTGTCCGGCA TATCG CACCGG-CACGGGGC     TTTGCAATGATTTCA 100 156
MTP40_RS13590 NONE
MTP40_RS13585 2831201 .. 2831259 - -20.7  -4.11183   CGGTATCAGAAATAA TTGCAACAACAAAAAGCGGGACCGCTGA GTTT TCAACGGTTCCGCTTTTTGTTGTGG-AA AATCAGGTGTTATTT 100 35
MTP40_RS13555 NONE
MTP40_RS13550 2823514 .. 2823560 - -17.4  -4.61231   GCAGATGCTTAAAAA GAGCGACCCTCTCCGTCATT GTTTCGG AATGACGGGGAGGGCCGCTT TATTTGGTATCTGTT 100 25
MTP40_RS13515 NONE
MTP40_RS13510 2816321 .. 2816353 - -25.7  -3.53224   GATCGTGTGTGCAAA      GAACCGCCGCCCGAA ATT TCCGGGCGGCGGTTC      TGTTTTTGTGTGTTC 100 47
MTP40_RS13490 NONE
MTP40_RS13485 2810617 .. 2810652 - -13.4  -5.41359   AAGTAAACCAAAAAA    CGACCCTCTCCG GGAATTGCAATG CGGAGAGGGTCG     TTTTTTCTTAATATC 100 46
MTP40_RS13450 2804656 .. 2804682 -  -2.9  -5.59534   AAGTATAACAAAAAA         CGCGCGAAATG AAAAG CGTTTCGGGCA         AAATTATTTTGTGCG  85 29
MTP40_RS13445 2804502 .. 2804531 - -11.5   -5.2189   CGAATGAGCAAAAAA       GAAGCACGAAGGC CGAA ACCTTCGTGCTTT        TTTGCATGGGCCAGC 100 31
MTP40_RS13440 2803346 .. 2803369 - -12.4  -5.37593   TTCCAAAGCAAAAAA          GCCCAGAGCG ATAC CGCTCCAGGC           TCCTTTGTCTGTATG 100 106
MTP40_RS13435 2803144 .. 2803171 - -15.6  -5.09895   GATGGATGCAAAAAA        CCGCCCTGACGG TTTC CCATCAAGGCGG         TTTGAGCTGGAGCTG 100 33
MTP40_RS13405 2799938 .. 2799959 -  -2.2  -2.52946   CTTTTGCACAAAACT           CCCTCCGT CATCGC ACGGACAG            GCCCCATCTCAAAGG  39 75
MTP40_RS13400 2799456 .. 2799469 -  -2.3  -2.54732   TGGAAATTCATCAAT               CCGTA ACAA TCCGG                GCAGATTCAGCGGCC  39 32
MTP40_RS13395 NONE
        nifU 2797596 .. 2797623 - -21.4  -5.23316   TATGATACCAAAAAA        GGGGTGGTTCCC GACC GGGAACCACCCC         TTTTTATGATTCTGC 100 50
MTP40_RS13380 NONE
MTP40_RS13375 2794476 .. 2794526 -   -22  -2.88677   CAGATAAGGATCATA CAAAACAACAGCCCCCTCGGGTCA TAA TAGCCTGAGGGGGCTGTTGCTCTG TAATTCAGCTGTTAC 100 37
MTP40_RS13335 2784810 .. 2784841 -   -13  -4.55826   CGGAAAACAGCAAAA      GGGAACGCGCCCCC ATTC AAAAGCGCGTTCCC       TTTTTTATTGCATTG 100 67
MTP40_RS13330 2784225 .. 2784252 -   -17  -4.96848   CTTTCCACACAAAAA        GCCCCCGCCATC TTGC GACAGCGGGGGC         CAAGCTTCAGATTTA 100 52
MTP40_RS13325 NONE
MTP40_RS13320 NONE
MTP40_RS13315 2782015 .. 2782030 -  -7.6  -2.67515   GCCAGCAGGACACGA              GTGCAA TCCT TTGCAC               GAAGTGGATGCTGGG  58 94
MTP40_RS13310 2780057 .. 2780098 - -23.1  -4.96848   CGCTTTATACAAAAA GACCCTCTCCGTCAGGGCC CGCA GGCTTTGACGGAGAGGGTC  ATTCTTTACTTTTTC 100 31
        rpsJ 2779171 .. 2779189 -  -8.1  -2.74523   TCACCGCCAACATGA             CCCCTCG GGAAA CGAGGAG             CATCGCTTGGATCAG  58 44
        rplC NONE
        rplD NONE
        rplW 2777527 .. 2777545 -  -4.5  -2.89191   TCATATCCCCATAGA             GGAACCC TCGGC GGGTTCG             GTTTAGACCATGCTG  47 28
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ 2774388 .. 2774411 -  -5.2  -2.91888   AAACTGTTCAAAGCA          GCGGGCAAAG ATTA CTTTGCCTTC           TCAACGATACGGACC  49 13
        rplN NONE
        rplX NONE
        rplE NONE
MTP40_RS13235 2772828 .. 2772857 - -15.7  -2.96274   TGTTTTATAATGATA       CCGCCCCGAAACA TGCT TGCCCCGGGGCGG        ATATCCGACATTCTA 100 58
        rpsH NONE
        rplF NONE
        rplR NONE
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY 2768892 .. 2768928 -  -7.4  -5.37593   CTTCAAAGCAAAAAA   GCACTGAAAAGTACGAG CATG CTCCC-CTTTCCAGTGC    TTTCTCACATCAGTG  93 54
MTP40_RS13195 NONE
         map 2767343 .. 2767364 - -17.3  -4.65895   CTCCGGACGCAAAAA           GGCCTCCCG TTTC CGGGAGGCC            CTGGGGGATGCTGTG 100 50
        infA NONE
        rpmJ NONE
        rpsM NONE
        rpsK 2765734 .. 2765746 -  -3.3  -2.94099   TCCTTCGATCAGACA                CGACG GCG CTTCG                GGGGACGGCAGCCGT  45 6
        rpsD 2765015 .. 2765030 -    -9  -3.53012   GCCCTCCTTGTCAAA              CCGATG TTGC CATCGG               CCCATTATTAAATTC  71 99
MTP40_RS13160 NONE
        rplQ 2763604 .. 2763647 - -18.4  -2.64616   GCCCGACCCACACGA TGCAAAAAAGGCCCTTTCCC CGAA GGGAAAGAGCCTTTGTTACA CTGTTTGAACAGTCA 100 48
MTP40_RS13150 2762075 .. 2762090 -  -6.1  -3.21695   GCATCATCAATTCAA              CCGGT ACAACG ACCGG               GACAGTCGATAGCTC  55 1
MTP40_RS13145 NONE
MTP40_RS13140 NONE
MTP40_RS13135 NONE
        prmC 2757846 .. 2757858 -  -3.4  -2.72977   ATTTTACAGATATTA                CAAC AGGAA GTTG                TAGATATTTTTATTG  42 35
        recA NONE
MTP40_RS13120 2755851 .. 2755861 -  -2.6  -3.21872   GGGAAATACATGCAA                 TTTT CAT AAAA                 AGGGATACTCTCTTT  45 211
        rimO NONE
        pgsA NONE
MTP40_RS13105 2753220 .. 2753257 - -17.9  -2.98508   GTAAGCAAAACACGA   GAAAAGGCTCTCTGCCA AAAC CGGCAGAGAGCCTTTTT    TGCATCTCAGCTTCT 100 32
MTP40_RS13090 2749537 .. 2749550 -  -8.1  -4.86001   AGCACCGCACAAAAA               GGGCA TGTT TGCCC                CTGCGGCCTGATGCA  86 213
         rny 2747792 .. 2747821 - -20.1   -5.4251   TTCACAGACAAAAAA       GGAGCCCGCTGTG CGAA CACAACGGGCTCC        TCTTGGTTCTGATCT 100 40
MTP40_RS13080 2745541 .. 2745575 - -15.7   -4.6902   GCACAATGCCAAAAA     GGCGCACAGTGGCTC TTTGC GGGCCACTGTGCGGC     CTTGTTCAGCGATTC 100 47
MTP40_RS13075 NONE
MTP40_RS13070 NONE
MTP40_RS13065 NONE
MTP40_RS13060 2741312 .. 2741356 - -14.8  -4.84017   AACTTCCTACAAAAA GCAGCGCCCCCGCCTGCCGG AAACA CCGGTGAGCGGGGGCGCTTT GCATTTGCTGGGAGG 100 48
MTP40_RS12990 2729046 .. 2729079 - -16.1  -5.26316   CTACCTGATAAAAAA     GGGGTTGCTGCACAA ACCT TCGTGCAGCAACCCT      TTTACTATGGTACTA 100 146
MTP40_RS12980 2726182 .. 2726207 - -18.3  -4.25104   CTCCTTTCACCAAAA         GCAGGGCGGAC ACGG GCCCGCCCTGC          TGATTTATAACGATA 100 47
MTP40_RS12975 NONE
MTP40_RS12970 2724104 .. 2724118 -  -2.1  -4.27117   TGCTCATAAGATAAA               CTCCT GTAAT AGAAG               ATTGTTTGTTTTCCT  57 255
MTP40_RS12965 2722968 .. 2723009 -  -2.7  -4.61873   CTGTACAAAGTAAAA CCCTCTCGGTCAC-GGCTTG CGC CGTGCCAGCGCCCGGTAGGG GACGTAAAATCTCTT  65 92
MTP40_RS12960 NONE
MTP40_RS12955 2720580 .. 2720599 -    -2  -2.70932   GCGGGGCGGGAATTA            CTCCCCGA TGCT CCGGAGAT             ATTCGAGATTTTTGT  39 3
MTP40_RS12950 NONE
MTP40_RS12945 NONE
MTP40_RS12940 2715886 .. 2715922 -    -8  -5.03747   AAAGGGTGCAAAAAA    GCTGCCCCGTCCAT TTTTATGGC AGGAACGAGGCAGC    CGTTTGTAGAAATAT  90 49
MTP40_RS12935 2714867 .. 2714894 -   -12   -4.0348   ATATCATAGCATAAA        CTCCCGGACTGT GTAT ACGATCCGGGAG         TTTTGTTTACACGCG  95 32
MTP40_RS12930 2713891 .. 2713906 -  -5.4  -5.61881   TGTGAAAAAGAAAAA              TACCGC CCAC GCAGTA               CAGGCGAAGGATTTT 100 264
MTP40_RS12925 NONE
MTP40_RS12920 NONE
MTP40_RS12915 2709984 .. 2710011 - -19.2  -5.10767   GACTGAACACAAAAA        CAGGGTGCGCCC TGCC GGACGCACCCTG         CCAAAATCCACACAC 100 393
        ruvC 2705815 .. 2705857 -  -7.8   -4.3586   CCACTGATACCAAAA GCCGCG-ATTGCC-TCTCCC TTCGG GAGAGGTGGCAATGCGCAGC ATTGACGGAGAGGGC  78 41
        ruvA NONE
        ruvB 2704025 .. 2704050 -  -2.5  -3.53012   CTTTCTCTCTTCAAA         CGGCTCAGAACA GGC TCTGCTG-GCCG         TTGTCCTCCGGGCTT  47 4
MTP40_RS12875 2702940 .. 2702950 -  -4.6  -4.07568   GCGCCCTTCTCAAAA                 GGGC TGT ACCC                 CATTCTAAATGACCA  62 199
MTP40_RS12870 2702075 .. 2702087 -  -4.8  -4.13767   TCCCTTACTTCAAAA                GCTC ATACA GAGC                CTGTGCGCACGCGCC  62 2
MTP40_RS12865 NONE
MTP40_RS12860 2700273 .. 2700291 -   -16  -2.59881   GAGGGAGGCTATAAG             GCCCCCTC CTC GAGGGGGC             TGTCGCCGCAGGCAA 100 53
        truA NONE
MTP40_RS12850 NONE
MTP40_RS12845 NONE
MTP40_RS12840 2695010 .. 2695041 - -17.4  -4.53163   TTATACACTACAAAA      GCCGCTGCACAG TTGTTACG CTGTGCAGCGGC       TTTCTGTTTGCTCTT 100 40
MTP40_RS12825 2690601 .. 2690645 - -20.2  -3.80551   CAAAGAGTGACGAAA CCAGAAATGCCGC-CCGAGCT TTTC AGCCCAGAGCGGCATTTCCGG TTTTTCCTTTCTGTT 100 46
MTP40_RS12820 2687686 .. 2687733 -   -28  -4.00411   GAAAACCGCAAATAA CCAGAAATGCCGCCCTGAGC TTTTTACG GCTCAGGGCGGCATTTCCGG TTTTGGGAATATAAT 100 273
MTP40_RS12805 2682427 .. 2682440 -  -2.4  -3.51161   TAAACCCCCACATAA               GGTT TTGAGT AACC                CCTTTTCAGGGCCCT  47 133
MTP40_RS12800 NONE
MTP40_RS12795 2682060 .. 2682079 -    -5  -3.68351   GCTTGACCATTCAAA            CTATTCTC TTTC GAGAATGG             CTTGTATTTCCTCTT  57 211
MTP40_RS12790 2679096 .. 2679113 -  -2.1  -3.18383   ATCGTCACCGACCAA             TATGACTG GTT CAGT-ATA             ACATTTCTGTTCTAC  43 130
         rrf 2678940 .. 2678965 - -13.3  -5.35721   ACACAACAACAAAAA         CCGCCCTGAGA AATC CCTCAGAGCGG          TTTTACATTAAGTCG 100 36
MTP40_RS12780 2677065 .. 2677077 -  -3.4  -3.59979   GCCCGCCACGTGAAA                TGCT CGTGC AGCA                GGGTCGCTTTTTGTT  50 47
MTP40_RS12775 2676379 .. 2676412 - -20.3  -4.74103   TGCGCAATGTAAAAA     GCCCGGCCATGCGGG CACT CCCACACAGCCGGGC      CAATTCAATTTCATT 100 36
MTP40_RS12770 2675724 .. 2675759 -  -3.4  -4.08706   TTGTCAGCATACAAA    TTCCCC-TTTCGATGAT GCT ATCATTGTAACAGGGAA    ATCTGTAGGAATTCT  58 51
MTP40_RS12765 NONE
MTP40_RS12760 NONE
MTP40_RS12755 2673184 .. 2673219 - -16.8  -4.28774   TCATGCAATGCAAAA    TGCCCGGCCATGCGGG CGTT CCCACACAGCCGGGCG     GCTTCCTTTTTCATC 100 53
MTP40_RS12750 2672109 .. 2672138 - -17.9  -4.56597   GCCGGGTGTGAAAAA       GCCGCCGCTCTCC GTCA GGAAAGCAGCGGC        GATCTGTTTTTTTAT 100 37
MTP40_RS12745 NONE
MTP40_RS12740 2670655 .. 2670665 -  -3.2  -4.08216   TTATCCCTCTGAAAA                 GAGA AAC CCTC                 AGTTCCACTCCCGGA  58 24
MTP40_RS12735 2669174 .. 2669192 -  -8.8  -2.72144   CCACCTCTCCCAAAG             GGAGAGGC AAC GCATCTCC             TGGATCCAGCTGCTG  61 110
        rfbC NONE
MTP40_RS12725 NONE
MTP40_RS12720 NONE
MTP40_RS12715 NONE
MTP40_RS12710 NONE
MTP40_RS12705 2663854 .. 2663888 - -19.4  -4.52589   TTCTCTGACACAAAA    GCCCCCGGAAAGCGG TTCGCG CCGCTT-CCGGGGGC     TTTTTATGCGTTATG 100 63
        rsxC NONE
MTP40_RS12695 NONE
MTP40_RS12690 NONE
MTP40_RS12685 NONE
MTP40_RS12680 NONE
MTP40_RS12675 2658228 .. 2658261 - -21.1   -4.7497   TTGAGCCACCAAAAA     GCGCCCCCATCACTC AAAG GAGCAATGGGGGCGC      TTTACCATATTACAA 100 51
MTP40_RS12670 2657009 .. 2657034 - -19.1  -5.24989   CCACATAGTAAAAAA         GAAGCCCCGAC GAAT GTCGGGGCTTC          TTTTTGTTTTTCAGC 100 49
MTP40_RS12650 2653238 .. 2653278 -  -2.8  -4.08216   CCAGCGCCGGTAAAA TGACCACCGTGACCAGCATG GGCAT CATGCTG--C-CGGTGG-CA TCCAGCGGCGCGATC  58 240
MTP40_RS12640 NONE
MTP40_RS12635 NONE
MTP40_RS12630 2647790 .. 2647825 - -21.3  -4.74598   CAAATTGAAAATAAA    CGGAGCCGCTGCACA TCATTT TGTACAGCGGCTCCG     TTTTTTACGATTTTT 100 43
MTP40_RS12620 2644735 .. 2644763 - -15.9  -4.96848   CGGCCTACACAAAAA        GCCCTCCGGTGCG TCT CGTCCCGGAGGGC        TTTGGGGTACAAATG 100 51
MTP40_RS12615 NONE
MTP40_RS12610 2642554 .. 2642594 - -14.7  -4.58395   GCCAGTCCGCAAAAA GGGGGCTGCTGCAC-CGG TTTTTC CCGTGTGCCGCAGCCCCT  CTTCTTTACTGGTTC 100 31
        rlmB NONE
MTP40_RS12595 NONE
MTP40_RS12590 2636833 .. 2636868 - -19.9  -4.57341   AATTTTGTGCAAAAA    GAACGCCGCAG-TCCC GGCGT GGGAGCTGCGGCGTTC    CGGACAGGATCAATA 100 35
MTP40_RS12585 2635597 .. 2635629 - -20.7  -4.72846   CCATACACGCAAAAA      CCGCCCATAGCTGTC AAA AACAGCCATGGGCGG      GTGCTTTTTCTTTAT 100 37
MTP40_RS12580 2634554 .. 2634583 - -10.7  -4.74504   AGCCGAACGCAAAAA       CAGCAGGCGGC TGCACATG GCCGTCTGCTG        TTCGGTTCACTCTTC 100 32
MTP40_RS12575 2633390 .. 2633402 -  -6.3  -3.94868   TAGAACAAATGTAAA                GAAAC TGT GTTTC                AGGCGTTTTTATCGT  66 24
        dnaK 2631133 .. 2631175 - -15.7  -5.85244   AAGCAAAATAAAAAA CGCTTCCGTCCTCAGCGGGC ATAC ACCCAC-AAGGACGAAAGCG TAAAACTTCCGTGGT 100 351
MTP40_RS12565 2630071 .. 2630089 - -10.2  -2.79175   AACGGTCAGGCAAAG             GCCCCATC CCC GAGGGGGC             TGTCACCGCAAGGTG  71 56
MTP40_RS12560 NONE
MTP40_RS12555 2628115 .. 2628153 -   -19  -2.73875   TTTGTCCGAATAGTA   CAATTCCCCGCAGGAG CACATGC CTCCGGCGGGGAATTG   AAACGTTGAATTTAA 100 175
MTP40_RS12550 2626698 .. 2626749 -    -3  -3.53811   GCCACCTCCCCCAAA GTGGGAGGCCTTGGCAAAACCACAA AGT TTATT-TTTCGCCAGAGGCTCCCCC TTTGGGGGAGCTGCT  49 79
        metA 2625677 .. 2625693 -    -3  -3.33815   AGGCGGTTGAAGGAA             GTCACTC CTCA GAGTG-C              TTCACGCGCTGCATC  47 10
MTP40_RS12540 2624469 .. 2624518 - -16.1  -5.29782   GACAGCGATAAAAAA CAAGCCTTTCCGT-TGGTGTCAC ACTGAG GTG-CACCACACGGAAAGGCTTA TTTTTCGTTATTTTT 100 33
MTP40_RS12520 NONE
MTP40_RS12515 2621489 .. 2621504 -  -5.4  -5.45802   TCCGGAAAAGAAAAA              GCACTG ACTG CAATGC               CCCCGGATGGCTGTC  87 56
MTP40_RS12505 2621048 .. 2621087 - -11.6  -5.95539   TTGCAAACAAAAAAA  GTACCCGAACCC-TTTCTC GTA AAGAATCGGGTTCGAGTAC  GAACTGTATGGTGGA 100 34
MTP40_RS12450 2610281 .. 2610320 - -23.7  -4.33417   CCTATTCACAAGAAA  GCGCCCCCGCTCACTGC GATCTT ACAGTGAACGGGGGCGC   TGTGCTTTTTCATAG 100 87
MTP40_RS12445 2608585 .. 2608623 - -13.9  -4.34737   GCAGGAACCAATAAA  CGCAC-GAAAGCCCCGGC CGGA GCCGGGGCTTTCTGTTTG   CTGCAAATGCCTGTT 100 39
MTP40_RS12430 2605932 .. 2605964 - -23.7  -4.39696   CGGTAAACGAACAAA      GGCAGGGTATCATCA CGG TGATGATACCCTGCC      TTTTGATATTATAGT 100 112
MTP40_RS12400 2601884 .. 2601916 - -12.7   -3.8901   CGGTAAATGAGCAAA      GGCAGGGTATCACCA TGA CGGTGGTATCCTGCC      TTTTGTTTTGATATG  93 46
MTP40_RS12360 2591605 .. 2591620 -  -3.2  -4.58859   AAAGATAAGAACAAA              GCAATG TATT CATGGC               AAAATCCTCCATCAG  66 50
MTP40_RS12355 2588049 .. 2588096 - -13.4  -5.31072   AGAATATAAGAAAAA GCAAAGCACCTCCGCTGCTGGC AAAC GCCAGTGGCAGAGGTGCTTTTT TGTCCCCTTGCGGGG 100 391
MTP40_RS12330 2584071 .. 2584083 -  -4.8  -5.06016   AGGATAGAAAGAAAA                CCCT CTTTC AGGG                CGAGCCATAGCGGCG  80 20
       cas10 NONE
        csm2 NONE
        csm3 2579598 .. 2579610 -  -4.9  -4.54821   AGCTTAAGCAGAAAA                TAGTT CAT AACTA                TCCACCTCATCAAAG  71 1
        csm4 NONE
        csm5 NONE
        cas6 2576747 .. 2576771 - -12.9  -5.19328   ATGCTACAATAAAAA          GAGACTGATGC AGT GCAACAGTCTC          TCGATAGCAATGAGG 100 42
MTP40_RS12295 NONE
MTP40_RS12290 NONE
MTP40_RS12285 2572517 .. 2572542 - -15.5  -5.03994   CTCCAGACATAAAAA         GCCCCTGAGTC TTTC GACTCAGAGGC          TTTGGATCATGATTA 100 102
MTP40_RS12280 NONE
MTP40_RS12275 NONE
MTP40_RS12270 NONE
MTP40_RS12265 2568720 .. 2568747 - -16.4  -5.72622   CTGATAAAGAAAAAA        GGGCACAACAGC GTCA ACTGTTGTGCCC         CATGATGTGAAAATT 100 39
MTP40_RS12260 2567905 .. 2567918 -  -5.3  -3.30441   GATGAGCTTTCAGAA               CTTAC TACT GTAAG                TGTACCATGAAATAT  54 85
MTP40_RS12255 2566122 .. 2566147 - -14.1  -5.27938   ACCTCCAAATAAAAA         CAGGACAATCC ATTT GGACTGTCCTG          TAAAAAGTGAAGGGG 100 70
MTP40_RS12225 NONE
MTP40_RS12220 NONE
MTP40_RS12215 NONE
MTP40_RS12210 2556131 .. 2556155 - -21.5  -3.44146   CTCCCGCATAACCAA          CGAGACCGCCC GGT GGGCGGTCTCG          TTTTTGTTTTATCGG 100 34
MTP40_RS12205 2554985 .. 2555015 - -14.7  -5.00616   GTTCTTTCCAAAAAA      GGGGAGGTG-CCCC AGAT GGGGCCGCCTCCCC       GTGATACAAGGTACA 100 47
MTP40_RS12200 NONE
MTP40_RS12195 2553357 .. 2553384 - -14.9  -5.13521   AAACCATTCAAAAAA        TGCCGCCGCAC GAATTT GTGCGACGGCA         TTTTCAGCTTCAATT 100 39
MTP40_RS12180 2547568 .. 2547588 - -10.4  -3.27525   GCGTTTCAAATTCAA            GGCTCCGG TTCGC CCGGAACC            AAATCCAACCCATTC  75 39
MTP40_RS12175 2546004 .. 2546037 - -17.4  -4.54727   CTGCCCAAAGCAAAA     CGGGGCGGGCGGGA TCAGCG TCCGGCCCGCCCCA      TTCAGATTCGGTTCA 100 66
MTP40_RS12170 NONE
MTP40_RS12165 2544063 .. 2544100 - -18.5  -2.87944   GAGCACGAGAGGATA   GAAAAGCACCCGCGGCC TGCT GGCTGCGGGTGCTTTTT    CCGAAGGAGAGAACG 100 47
MTP40_RS12150 2541518 .. 2541539 -   -13  -4.18018   CGCCTCCACGGAAAA           GAGCCGGG TGCTGC CCCGGCTC            CTGAACATTTTAAAT 100 35
MTP40_RS12140 2537492 .. 2537519 - -18.4  -3.35679   CGCCCCTATGCAGAA        GCGCCCCACCGG TTCC CCGGCAGGGCGC         TTCCACAGGTTATTT 100 200
        greA NONE
        lysS 2535255 .. 2535290 - -11.3  -5.45802   CCGTCAAAAGAAAAA    GCCCGAAACTTCTCA GTACAT CAAGAAGTTTCAGGC     TTTGTTTTGCTTAAA 100 49
MTP40_RS12100 NONE
MTP40_RS12095 NONE
MTP40_RS12090 NONE
MTP40_RS12085 NONE
MTP40_RS12080 NONE
MTP40_RS12075 2522850 .. 2522890 - -12.6    -3.885   ATCGCCACACAACAA CCTGAACC-TGACCATCCC TTCT GGGATGGCCTTGGTTCGGG  TTTGCTATGTAGCGA  93 348
MTP40_RS12070 2522187 .. 2522211 - -12.2  -4.11216   CTGTTACGGGTAAAA          TCAAGTGCCG GGTGG CGGCACCTGA          TTTTCAACAGACCTT  95 1
MTP40_RS12065 NONE
MTP40_RS12060 2518481 .. 2518495 - -11.4  -3.55444   GTTCCATCGCTTAAA               GTCCCC ACC GGGGAC               TTCATTGCTTCGCAA  83 270
MTP40_RS12055 2518245 .. 2518258 -  -3.8  -3.59262   CGGGACATTTTCAAA               GCGA GTACAT TCGC                TCCGTGTATTCATCC  52 7
MTP40_RS12050 2516445 .. 2516486 - -16.1   -3.5525   ATACATTTGTGCAAA TAAAAGCAGGTACACCGCA TTTC TACAGTGTACCTGCTTTTC  ATCATATTGTGGGTA 100 405
MTP40_RS12045 NONE
MTP40_RS12040 NONE
MTP40_RS12035 2514627 .. 2514646 -  -4.2  -3.40522   AGTGCGGCAGGAGAA            GTCGTTCC GAAT AGAGCGAC             AGCTACCGCAACCGC  50 73
MTP40_RS12025 2513651 .. 2513675 - -15.9  -4.65895   GGCGTTACGGAAAAA          CAATGTGGTCA ATT TGACCACATTG          TTTTCTGGTAACTGA 100 473
MTP40_RS12020 2512291 .. 2512305 -  -8.5  -4.26344   ATAGGGGGATCAAAA               GCGGG TCATG CCCGC               CAGCTATTGGGGGTG  77 16
MTP40_RS12015 NONE
MTP40_RS12010 2510210 .. 2510248 - -14.7  -4.16251   ACAGAATGTTGAAAA   GGAGCCTTACGCCATGA GTATA CCATGACGCAAGACTCC   CTGCAACATCAAACG 100 60
MTP40_RS12005 2508555 .. 2508586 -   -16  -4.59376   AGGAGCAAACGAAAA      GAGCACCTCTCGGA TGGT TCCAAGAAGTGCTC       TTATAGCTTTGTTCA 100 381
MTP40_RS12000 NONE
MTP40_RS11995 NONE
MTP40_RS11990 2507568 .. 2507604 - -16.7  -3.81755   AGCTTGTAAACATAA    GAGGGGCAGATACCA AGTTATA CGGCATCTGCCCCTC    CGGACATTATGCAAA 100 32
MTP40_RS11985 NONE
MTP40_RS11980 NONE
MTP40_RS11975 2505454 .. 2505488 - -12.2  -4.29472   CAAATTAAAACTAAA     CGGTCTGAGCCCTGTA CAG TACATGATTCAGACCG     TTGGGGTCGCTTAAT  95 52
MTP40_RS11920 NONE
MTP40_RS11915 NONE
MTP40_RS11910 2494745 .. 2494780 - -17.6  -3.64431   CAACAGCATATACAA    CAAAGCCCTCTCGGTC GATT GGCCGGGAGGGCTTTG     TTTTGTGCGGGTCAA 100 41
MTP40_RS11900 2491632 .. 2491642 -  -6.8  -2.70354   CTTTTGACAAATTGA                 TGCC ATT GGCA                 GGGGGTGTCCTGCCG  53 264
MTP40_RS11895 NONE
MTP40_RS11890 2489838 .. 2489866 - -15.3  -4.91511   ATCTCAGCATAAAAA        GGGGGCTGCCC ATTCGGA AGGCAGCCCCC        TTTGCCGAACTAGGA 100 46
MTP40_RS11885 NONE
MTP40_RS11880 2487438 .. 2487476 - -24.7  -3.48276   TTTCCCCCTATACAA   CAGGCCGCCGTGCAGGA TCATC TCCTGCACGGCGGCCTC   TTTGTTTTATTCTGT 100 32
MTP40_RS11865 NONE
MTP40_RS11860 NONE
MTP40_RS11855 2482610 .. 2482622 -  -3.3  -2.64155   GCGCTGGCAAAGCCA                GACCG AAG CGGTG                AAAGGTTTAATCATA  42 32
MTP40_RS11850 NONE
MTP40_RS11845 NONE
MTP40_RS11840 2479267 .. 2479304 - -17.9  -5.46657   CAGCCGAATAAAAAA   TCAAGACCGACGATCTC TTTT GAAATCGTCGGTCTTGT    TTCAATCCGAGTGGC 100 31
MTP40_RS11835 2477572 .. 2477612 - -11.3  -5.07652   CCCGGCAAAACAAAA GGGGCCTTTCTGC-TTGC GGGATG GCAAAGCAAAAAGGCCCT  TTTCAGTTTTTTCAG 100 340
MTP40_RS11830 2476212 .. 2476239 - -12.8  -5.24129   GCTCTCCATAAAAAA        TGCCCGAAAAGA TCTC TCCCTTCGGGCA         TTGGAAATGCGGAAT 100 42
MTP40_RS11825 NONE
MTP40_RS11820 NONE
MTP40_RS11815 NONE
        cbiD NONE
        cobM NONE
MTP40_RS11800 NONE
        cobJ NONE
        cobK NONE
        cbiE NONE
MTP40_RS11780 NONE
        cobT NONE
MTP40_RS11770 NONE
MTP40_RS11765 NONE
MTP40_RS11760 NONE
MTP40_RS11755 NONE
        cbiB NONE
MTP40_RS11745 NONE
MTP40_RS11740 NONE
MTP40_RS11735 2457900 .. 2457919 -  -3.7  -2.55282   AAGTCAAGCAAAAGC            GTAAAAA GGGGCG TTTTTAC             CGGTTCCACCCTATT  42 36
MTP40_RS11730 NONE
MTP40_RS11725 2454113 .. 2454147 -  -2.1  -4.11216   TCCGCAGCCTGAAAA    CGGTGCAGCGGGTGGAG GTG CTCC-CCTACCACA-CG    CTGGGGCTGTTCAAG  59 282
MTP40_RS11685 NONE
MTP40_RS11680 2441672 .. 2441683 -  -3.6  -3.16619   AGGAAATGCAACACA                CCGA CCGC CCGG                 TTTTGCGCTTTTTTT  46 54
MTP40_RS11675 NONE
MTP40_RS11670 2440036 .. 2440075 - -23.8  -4.90906   CCACAACATGAAAAA  TGACCCTTTCCGCCACGC CGAC GCATGACGGAAAGGGTCA   TTTTCTTTTAAGAGA 100 33
MTP40_RS11660 NONE
MTP40_RS11655 NONE
MTP40_RS11650 NONE
MTP40_RS11645 2436288 .. 2436324 - -19.6  -4.85129   ACGACACAGCAAAAA    GCGAACCGCCATGG TGACAGATG CCATGGCGGTTCGC    TTTTACACTTTTTTC 100 140
MTP40_RS11630 2432612 .. 2432646 - -24.4  -3.72027   ACTTTCGATGAATAA     GCAACGCCCCCTGTGC GCA GCACAGGGGGCGTTGT     TCTTATCCGCGGTGG 100 28
MTP40_RS11600 2425975 .. 2425988 -  -3.7  -5.26875   GGTGCAAGTAAAAAA               GAGCG TGTC CGCGC                CAGCTTCTTCTGCGG  84 454
MTP40_RS11585 NONE
         ffh 2422038 .. 2422048 -  -8.2   -3.3164   AATCTATCTGTACAA                 CCCC TGC GGGG                 TGTATACCATTGTTA  66 38
        rpsP NONE
MTP40_RS11570 2421446 .. 2421471 - -16.9   -5.2015   CTAATAATACAAAAA         GGCCCCTTGCC TTGC GGCAAAGGGCC          CGTAGGGTGCTCAGT 100 36
        rimM NONE
        trmD 2419438 .. 2419456 -  -3.2  -3.01712   GTTGGCCGGGTAATA             CAAAAGTT TTC AACTTTTT             TTCGACCTTCGACAG  45 66
MTP40_RS11555 2418930 .. 2418951 - -13.7  -5.45802   TTGGTAAAACAAAAA           GCGGCAGGA AACA TCCCGCCGC            CTCAAAAATCAAAGG 100 47
        uvrC 2417018 .. 2417057 - -17.8  -3.01791   AGCTTTCCCTGAATA  CGCCAGGAGGGCGGCTGC CGAT GCAGCCGCCCTCCTTTTG   TTATGCGTGAAAATA 100 26
MTP40_RS11530 2413077 .. 2413134 - -22.3  -2.52635   AGGCCCAGCAGTAAC CCCCGGATAAGAAAAATCCCCGCCGTC GCAA GACAGCGGGGATTTTTCTTATCCCATA TTACTTTTCGTAGTC 100 26
MTP40_RS11490 NONE
MTP40_RS11485 2402457 .. 2402470 -  -5.9  -4.11304   GGAATCTATAAATAA               GCGGG CAAG CCCAC                CTTATTTATCACAGG  66 27
MTP40_RS11480 2401673 .. 2401712 -   -15   -4.9792   CACCGCACAGAAAAA  GACCAGAGCTGTTCTGCC AAGT GGCAGTTCAGTTCTGGTC   TTTTGTTTTACAATG 100 83
MTP40_RS11465 2400194 .. 2400221 -  -7.8  -6.04324   GCAAAAAAGAAAAAA        CAGCCTAAAATC TTTC GATCCTAAGCTG         TTTTATGATGAAGTG 100 39
MTP40_RS11415 NONE
MTP40_RS11410 2392459 .. 2392496 - -19.9  -3.82433   AGAAGCAGTATTAAA   GCCGTTCACCACGCAGA TTTT CCAGCGTGGCGAACGGC    TTTTTTGCTGCCCCT 100 45
MTP40_RS11405 2391826 .. 2391864 -  -8.2  -4.90869   AGCATGAATGAAAAA  GAGGCTGTTACAC-CGG TTTTAT CCTTGTGCAACAGCCCC   TTCCTTTACTTCAGC  88 66
MTP40_RS11400 NONE
MTP40_RS11395 NONE
MTP40_RS11390 NONE
MTP40_RS11385 2389158 .. 2389169 -  -4.4  -3.64703   GCCTCCTTACGCAAA                TACC TGCT GGTA                 TTTCTCTTTTCATAC  55 53
MTP40_RS11380 NONE
MTP40_RS11375 NONE
MTP40_RS11370 NONE
MTP40_RS11365 NONE
MTP40_RS11360 NONE
MTP40_RS11355 NONE
MTP40_RS11350 NONE
MTP40_RS11345 NONE
MTP40_RS11340 NONE
MTP40_RS11335 NONE
MTP40_RS11330 NONE
MTP40_RS11325 NONE
MTP40_RS11320 NONE
MTP40_RS11315 NONE
MTP40_RS11310 NONE
MTP40_RS11305 NONE
MTP40_RS11300 NONE
MTP40_RS11295 NONE
MTP40_RS11290 NONE
MTP40_RS11285 NONE
MTP40_RS11280 NONE
MTP40_RS11275 2370015 .. 2370031 -  -7.9  -4.58663   ATCACCGGGTAAAAA              GCGTCCC GAA GGGATGC              GCAGCCTGCATTGGG  81 252
MTP40_RS11260 2368581 .. 2368621 -  -4.6  -3.05384   CTTTGTTGTAGCGAA  CCACCGAGGAAATCTCTC GTTTG GGAAGGTATCCTCGACGG  CTTTTTTAGTTTATG  49 31
MTP40_RS11255 2367503 .. 2367541 - -18.9  -3.18452   CCGTTAAACAAATGA   CGCCGAGGATTCTTCCC GTTTT GGGAGGCATCCTCGGCG   GATTTTTTAGTTTAT 100 69
MTP40_RS11195 2351980 .. 2351993 -  -3.7  -4.07568   TTTCGTTTTGCAAAA               GACGG TGCA CCGAC                TGATTTATGGAAGCG  58 30
MTP40_RS11095 2329069 .. 2329079 -  -2.6  -4.45945   ATTCATCAATCAAAA                 TTTT GAA AAAA                 TGATAGATGAAATGA  62 9
MTP40_RS11090 2328000 .. 2328026 -  -6.5  -3.01712   TCTGTTCGGCTAAGA        GCCGCAGGCGGG TTTT CCCGCCTGTA-C         ATAATCAATCTGCCA  55 30
MTP40_RS11040 2320585 .. 2320601 - -11.5  -3.28712   GCGGGGTTTGCAGAA              CGGCCCC ATA GGGGCCA              TAATACCAGCCGCGC  82 87
MTP40_RS11035 2317006 .. 2317021 -  -4.6  -3.28712   CGCCGTGCGCGAGAA              GGTGCC CTTC GTCACC               CTGATCTGGGAGGAC  52 490
MTP40_RS11025 NONE
MTP40_RS11020 2314604 .. 2314646 -  -4.9  -4.56597   TCCTTCTTTCAAAAA GACAGACCCCCGGTACTGCAA ACA TGGCA-C-CCGGAGGTCTGTT TTTGTTATCCTAAAT  71 30
MTP40_RS11015 2312972 .. 2313028 - -32.8    -2.867   ATGAAGATCATCATA GCAGAACAGGCATCCTGCCCGATACCGC CAA GCGGTATCG--CAGGATGCCTGTTCTGC TTTCTGTTTCCCGGA 100 66
MTP40_RS11010 2309739 .. 2309765 -  -4.3  -2.73124   CCTCACTGGTTAAAC         CTCTCTGCCTG CTCCC CTGACAGGGAG         CCAAGAGAAGTGTTG  44 50
MTP40_RS11005 NONE
MTP40_RS11000 2306507 .. 2306546 - -25.1  -4.41206   AATGATCCCAGAAAA  CAGCAGCGCCCTGCCGG TTTACC CCGGCAGGGCGCTGCTT   GTTTGATATGCTTTT 100 39
MTP40_RS10990 2302821 .. 2302855 - -26.6  -4.05714   ATTTTGAAGCAGAAA     CAAGCCGCCCACAGGA ATT TCCCGTGGGCGGCTTG     ATCCGTTTCCTTACT 100 36
MTP40_RS10985 2301461 .. 2301518 -  -7.1  -4.52589   TCTCTGTACAGAAAA TGCCCGTTTTTTCCCGGGAGTTT TGCACAAAACGT ACATTTCCGGGAAAAACCGGGCA TTTTTTTCATTTTTC  80 39
MTP40_RS10980 2299992 .. 2300029 - -17.7  -4.17048   TTCTTTCCAAAAGAA   GGCGCGTGCGCCCGAGA GAAA TCTCGCACGCACGCGCT    TTTAAGCTTTTACCA 100 93
MTP40_RS10975 NONE
MTP40_RS10970 2297310 .. 2297353 - -29.1  -4.17762   CAGCTGGGAAAATAA CAGCAGAAGCCCCCCGCCGG GAGAA CCGGCGGGGGGCTTCT-CTG TATGCGAATGAGGAG 100 41
MTP40_RS10965 2296010 .. 2296054 - -31.6  -3.53012   CTTTTTTGCCGCAAA CAGCAGAAGCCCCCCGCCGG TTCTC CCGGCGGGGGGCTTCTGTTG TGGCAGCTTATGGTA 100 56
MTP40_RS10960 2293533 .. 2293582 -   -20  -4.21439   GAAGCTTAACAGAAA CACAACAGGAGCGCTCTGCCGG TATGAC CCGGTGGGGCGCTCCTGCTGTG TTTGGGAAATATCAG 100 54
MTP40_RS10945 2288509 .. 2288529 -  -6.8  -3.55444   TTGGCATTGCGTAAA            GCCTTGCC TCTTT GCCAAGGC            CTCTCCTACTAGGAG  61 92
        leuC NONE
        leuD NONE
        leuB 2285468 .. 2285478 -  -8.2  -3.05384   TGCCCTCTCAGTCAA                 GGCC GCA GGCC                 TTGCCAGCTCCCCCT  63 94
MTP40_RS10925 2284362 .. 2284399 - -22.9  -3.27475   CTGTCTAGTATAACA   CAAAACGCCGCTCCGGG ATAT CCCGAAACGGCGTTTTG    ACTGAATATTTTACT 100 41
MTP40_RS10920 NONE
MTP40_RS10915 NONE
MTP40_RS10910 2281883 .. 2281907 -  -8.4  -3.18366   TTTCCAATTAAGACA          GCGCCTGCCG CCTAT CGGCGTGCGC          TATTTTCTAACCGGT  64 103
MTP40_RS10905 NONE
MTP40_RS10900 NONE
MTP40_RS10895 2278860 .. 2278917 - -27.5  -3.95852   ACGGCACGAAGTAAA TCTGAATCAACAAAAAGTGGACGGTTC ACAC GAACCGCCCACTTTTTGTTTACTCAGA TATTACCGCCCGCGG 100 28
MTP40_RS10865 2273718 .. 2273753 - -23.4   -4.2349   GGCTGACACGCAAAA    GCGGCCCCGGAGAG TTTTCCTT CTCTCCGGGGCCGC     GTTCTGTTCCGGCTC 100 39
MTP40_RS10855 NONE
MTP40_RS10850 2270349 .. 2270395 - -18.7  -5.07652   CTGTGGAAAAGAAAA GGGCCCGGCAGAAAGC-GCACG CCCA CGTGCCGCGATCTGCCGGGCCG ATGCACCGCAAAGCG 100 70
MTP40_RS10845 NONE
MTP40_RS10840 2269107 .. 2269147 - -18.4  -4.93318   GAGAACGCATAAAAA TACCCCTCTCCGTCCGTGC GGCC GCACAG-CGGAGAGGGGTG  TTTTTATGCGATCAA 100 37
MTP40_RS10820 2263432 .. 2263465 - -16.1  -3.03459   GACATTTACAAAGCA     CAAGGAGGCCGCTGCC CAA AGCAGCAGCC-CCTTG     TTGTGCAGGTGATAT 100 47
MTP40_RS10815 2261866 .. 2261900 - -15.7   -4.9792   CATTTGATACAAAAA     GGCCGCCGTACGCGC AAAAA GCACGCACAGCAGCC     ATTTTTCAATTAAAG 100 35
MTP40_RS10810 2260842 .. 2260888 - -19.8  -4.96848   TTTGGCATACAAAAA CACCCCATTTCCTAAACAGTAT ACC ATACTGTCTAACAAATGGGGTG CAGTTCACATTTTAC 100 89
MTP40_RS10805 NONE
MTP40_RS10800 2259556 .. 2259573 -  -3.3  -5.55664   GGAGCAGTAAAAAAA             CGCAGGC CTGA GCCTGTA              ACATAAAAACTCCCC  89 85
MTP40_RS10765 2253063 .. 2253073 -    -4   -3.1012   AAACTGCCAAAATTA                 GAAA CTT TTTC                 TTGTCAATCCTGCCG  48 29
MTP40_RS10760 2252066 .. 2252087 - -11.5  -3.53012   GCTTTGCTTCTTAAA           TGCCGCGGC GGGT GCCGTGGCA            CATTCTTGCTTATAT  83 193
        uxuA NONE
MTP40_RS10750 2249264 .. 2249298 - -12.2  -6.09196   CGGAAAACAAAAAAA     TCCCGCACTGCG GCAAAGCAAAA CGCAGCGCGGGA     ACGAAGATAGCTTAA 100 60
MTP40_RS10745 2248246 .. 2248256 -  -2.6  -3.14132   CGTTTTGTCCATCAA                 TTTT CCA AAAA                 CGCCTTCTGGTAGCT  45 11
MTP40_RS10740 NONE
MTP40_RS10735 2247566 .. 2247603 - -13.4  -3.80855   GCGCCCAAAAATCAA   GGCACAGCGCAGTTAC GATGAT GCACCAGCGCTGTGCC    TTTGTGTTTTGTTTC  95 39
MTP40_RS10730 NONE
MTP40_RS10725 2246286 .. 2246321 - -16.9  -4.07568   CCTGTTTCCGCAAAA    GAGGGTCGCTGCACA TTGCTC CGTGCAGCGGCCCTC     TTTCTGTTTTGATGG 100 203
MTP40_RS10715 2243098 .. 2243142 - -18.8  -2.87132   TTTTCGTGTGATAGA TGCACAAAGCAGGGC-GCTTC CTTC AAAGCGGCCCTGCTTTGTGCG TGTATTCATTATAGT 100 207
MTP40_RS10710 2241760 .. 2241789 -  -9.2  -5.14563   CTTTCTACCAAAAAA       GCGGAGACAACC TGTTCC GGCGGCCTCCGC        AAGGGTACATCATTC 100 91
MTP40_RS10705 NONE
MTP40_RS10700 NONE
MTP40_RS10695 NONE
MTP40_RS10690 2238200 .. 2238240 - -15.5  -3.95183   TTACAGACAGAACAA CGCCCGCCGGGTGTGGTAC TTCTC GTACCG--CCCGGCGGGCG TATTGTTTTGCATTC 100 56
MTP40_RS10660 2231056 .. 2231096 - -14.7  -3.18788   CTATTCATAAAATGA  CACAGCCGCCCGATGCA GTAGTCA TGCAACGGACGGCCGCG  TGTCAAAAGGAGGAT  91 114
MTP40_RS10655 2230553 .. 2230567 -  -7.1  -3.56092   GGAGCAGGTCCCAAA               CAGCG TGCTG CGCTG               TTCAGCCGATCATAA  64 27
MTP40_RS10650 NONE
        feoB NONE
MTP40_RS10640 2227799 .. 2227832 - -18.9   -5.0538   TTTCATTCTAAAAAA     GGGCGCGGGCCGA TTGGATGT TCGACCCGCGCCC      AGCGGTTTTTACCGA 100 41
MTP40_RS10635 NONE
MTP40_RS10630 NONE
MTP40_RS10625 2223881 .. 2223904 - -13.9  -5.36441   CCTGCACACAAAAAA          GACGCGCTC ATCACA GAGCGCGTC           TTTTTTGCTTGATAT 100 50
        murC 2221261 .. 2221287 - -14.4  -4.18018   GTCCGGCAGCCAAAA         GCCGCCGGGC GTTTTTG ACCCGGCGGC         TTTCAGCTATTCCAA 100 45
MTP40_RS10610 NONE
MTP40_RS10605 2218833 .. 2218851 - -12.4   -5.5604   GCAACGAACAAAAAA             GCCCTCCC AAA GGGAAGGC             TCTTGCGGTTAAACC 100 170
MTP40_RS10600 2215920 .. 2215965 - -20.6  -5.00616   CTTTTGCGCAAAAAA GCAGGCACTCCGCC-C-GCCCC GTCC GGGGCAAAGGCAGAGTGCCTGC TTTCGTTACAGATTC 100 55
MTP40_RS10595 NONE
MTP40_RS10590 2213902 .. 2213935 -  -3.2  -3.83262   CAAACTTTACAATAA    CTGCCAAGGCCTCGCCC TTC GGGAGAGG--T-GGCAG    CGCGCCAGCGCTGAC  55 57
MTP40_RS10585 NONE
MTP40_RS10580 2210877 .. 2210889 -  -3.3  -2.64155   GCGCTGGCAAAGCCA                GACCG AAG CGGTG                AGAGGGTTTTTCCTC  42 39
MTP40_RS10575 2209782 .. 2209800 -  -5.8  -3.09516   TCCCCTACTAGGGAA             GCTGGCGC GAA GCGCCTGA             GAGGTTCAGTTGGCA  53 31
MTP40_RS10570 NONE
MTP40_RS10565 NONE
MTP40_RS10560 NONE
MTP40_RS10555 NONE
MTP40_RS10550 2205680 .. 2205709 - -12.2  -4.02334   CAGGCATAGCACAAA       GGGGAGAGC-ACC TTCAC GGTTGCCCTCCCC       TTTTTTCAGCTGTTC  95 31
MTP40_RS10530 NONE
MTP40_RS10525 NONE
MTP40_RS10520 NONE
MTP40_RS10515 2199525 .. 2199572 - -12.3  -5.74122   CATCATATAAAAAAA CTCCTTTGCCG-ATAAGCTG ATTCTCTTA CAGCTTATTCCGCAAAGGAG CAGAGGGTGCATTTT 100 41
MTP40_RS10510 NONE
MTP40_RS10505 2196175 .. 2196215 - -27.9  -4.35348   AGAAGATAACAGAAA  CAACCCTCTCCGTCATTAC TTC GCAATGACGGAGAGGGTTG  TTTTTAGTCAATCGT 100 29
MTP40_RS10495 2193855 .. 2193884 -  -9.3  -3.91897   CCTGGCAGGCAGAAA       GCCCCC-TGACGAT TAC ACTGTCAAGGGGGC       TTCCTGCTGTTTATT  76 125
        rpmG NONE
        secE 2185731 .. 2185756 -  -2.5  -3.36273   CCGTTTCAAGATGAA         TCATGCGCC-GA TGA TCAGGCCCAGGA         TGCCGCCGAAAATGG  45 0
        nusG 2185132 .. 2185142 -  -8.2   -3.7941   CACGCTCTATAAGAA                 CCGC ACT GCGG                 TCTTACCTTGGTAAA  73 55
        rplK NONE
        rplA 2183814 .. 2183847 - -18.5  -3.38314   TTGAATTTTTAAAGA     TTTTTTCTGTCATCC GTCA GGATGACAGAAAAAA      CTTCAAAGCTTCAAA 100 41
        rplJ NONE
        rplL 2182552 .. 2182579 - -15.6  -4.93365   GCGCACAACCAAAAA        GGCACCCTCGCC TTTC AGCGAGAGTGCC         TTTTGTTTCAAGAAT 100 76
MTP40_RS10415 2178051 .. 2178061 -  -2.4  -4.07568   CCCGCCGGTGCAAAA                 CCCG GGG CGTG                 GATTTTTTGTGAAAG  55 47
MTP40_RS10410 2177001 .. 2177033 - -15.6  -5.62219   AACAGATGAAAAAAA      CTCCCCGCCGTGAG ATTCA CTCACAGTGGGGAG      TCCGTTTTGATAGTT 100 49
MTP40_RS10400 2175073 .. 2175122 - -23.2  -4.77896   GAAGTAACGTAAAAA TCCCACCCTCTGTTCATCGGGCAC ATAA ATGCCCG--GAACAGAGGGTGGGA TTTTTGTAATTCGAT 100 41
MTP40_RS10390 2173038 .. 2173063 - -10.4  -5.46657   GATGCTAACAAAAAA         GGCAGCTGAC TCAACG GCCAGCCGCC          CAGAAGATCAATATT 100 40
MTP40_RS10380 NONE
MTP40_RS10375 2169504 .. 2169518 -  -3.5  -3.20723   TTTTCAGCAATTCAA               CCAAC GGCGT GTCGG               GGTATTGCAGGCCTT  46 7
         gap 2168151 .. 2168189 - -15.5  -6.08563   AACACATAAAAAAAA   CACCCTTTCTCTCATGG AAGAA CCACAAAAGAAAGGGTG   CAAAAATCTCTAAAA 100 129
MTP40_RS10360 NONE
MTP40_RS10355 NONE
MTP40_RS10350 NONE
MTP40_RS10345 NONE
MTP40_RS10340 2159566 .. 2159588 -  -2.1  -3.78329   TGCGAGGAATGCAAA          TAAT-CGTGC ATCG ACACGTATTA           TTTGTTACCCCCCCC  50 30
MTP40_RS10335 NONE
MTP40_RS10330 NONE
MTP40_RS10325 NONE
MTP40_RS10320 NONE
MTP40_RS10315 2155181 .. 2155196 -    -4  -3.07043   TTCACCACCTCAATA              CACTCT CTCA AAAGTG               CATAAAAAGCTCGTC  47 181
MTP40_RS10310 NONE
MTP40_RS10305 NONE
MTP40_RS10300 2152964 .. 2152974 -  -3.2  -2.52464   CGCCTCTTTAATGTA                 CTGC GGT ACAG                 TCCGGAATGTCTGCG  42 7
MTP40_RS10295 NONE
MTP40_RS10290 NONE
MTP40_RS10285 NONE
MTP40_RS10280 NONE
MTP40_RS10275 2147228 .. 2147240 -  -5.5  -3.62046   TTACTGCGTCAAGAA                TCCGC AAT GCAGA                AGCATCTCCACTCAT  59 116
MTP40_RS10265 2145477 .. 2145487 -  -6.8  -3.05997   CTTTTATAAATCATA                 GCGA AAA TCGC                 ATAATGTTTTGGCAG  55 88
MTP40_RS10260 2144811 .. 2144860 -    -8  -4.84914   ATTTATATAAGAAAA CCGTGTGAA-CTGCCAGAGCTATA ACTC TAC-GCTCCGACTGATCCACACGG CTCTAAAATATTTAT  86 37
MTP40_RS10255 NONE
MTP40_RS10250 NONE
MTP40_RS10245 NONE
MTP40_RS10240 NONE
MTP40_RS10235 NONE
MTP40_RS10230 NONE
MTP40_RS10225 NONE
MTP40_RS10220 NONE
MTP40_RS10215 2133882 .. 2133918 - -13.7  -4.56597   GTTTTTTCTGAAAAA    GACCCGCCGCAGGGA GTGTTCG CCCCCGCAGCGGATC    CTGTCCATTCAGGAT 100 34
MTP40_RS10210 2132402 .. 2132427 - -17.6  -5.48213   TACCCAAAATAAAAA         GTGCGGCGGC GTATAT GCCGCCGCAC          CTCAGTGATGCTGGT 100 49
        tpiA 2131413 .. 2131452 - -12.1  -3.76888   GATTTAGAACAAATA  GCGCCCGGC-ACAGCGCT GGAAA AACGGCGCAGCCGGGCGC  TGGGAAAACAGGTCA  88 51
        gpmI 2129782 .. 2129818 - -25.3  -4.39568   AGCGATACAGCAAAA    GACCTCCCCATGCAGGC AGC ACCTGCACGGGGAGGTC    TTTTTACGTTTCAGG 100 61
MTP40_RS10185 2125992 .. 2126031 - -11.4  -5.24531   ACTTTGCACAAAAAA  TAGCCCTCTCGATCACGC TGTC GCATGACTGAGAGGGCCG   ATATTACTTCAGGAT 100 29
MTP40_RS10180 2125318 .. 2125363 - -17.8  -4.98917   TAAAACAGAATAAAA CAG-C-ACAAGCCCCGGGCCTT GCAA AAGGTCCGGGGCTTGTTGTCTG CTGATTTTACAGGGA 100 48
MTP40_RS10155 2119606 .. 2119616 -  -2.4  -4.25104   TTTCTTCGATCAAAA                 GGGG TTG CTCC                 TTCCTGACGTTTTGG  57 143
MTP40_RS10150 NONE
        deoD 2116681 .. 2116710 - -15.8  -4.71061   ACTGACACCTAAAAA       GAGGGCCGTTGC TTTTTG GCAACAGCCCTC        TTTCGCTCTCAAAAA 100 46
MTP40_RS10135 NONE
MTP40_RS10130 2115165 .. 2115190 -  -2.5  -4.56775   ATTGCGCTTTAAAAA         GGGAATGCGCA CACT TGCACATTTAC          TGACCCAAGTATAGC  63 158
MTP40_RS10125 2113870 .. 2113913 - -25.4  -4.96848   TTCGCGAGACAAAAA CGACCCTCTCCGTCAAAGCC TGGC GGCAATGACGGAGAGGGTCG TTCCCTGCAGCCCTT 100 57
MTP40_RS10120 NONE
MTP40_RS10115 NONE
MTP40_RS10110 2110028 .. 2110067 - -26.6  -3.01712   GTCGGGTTTTGAACA  CCAAGGGCGCAGCTGCCC GGAA AAGCAGCTGCGCCCTTGG   AACAAACCTCGCTCA 100 38
MTP40_RS10105 2108551 .. 2108563 -  -2.7  -2.86449   AGCCCACCAGAATGA                TCTTC ATA GAAAA                TGTCCTTTCCGTCCC  42 67
        trkA NONE
MTP40_RS10095 2105701 .. 2105730 - -17.9  -4.84527   CTGATACAGCAAAAA       GCGGATGCGTTCC GGTG GGAGCGCATCCGC        TTTGTTATTTTGCTC 100 39
        pheS 2102500 .. 2102516 -  -3.7  -3.34192   AATTCTTTTAACCAA              CTGAAAG GTA CTTTCAT              TGTCTGTTCTCTCCC  48 44
        pheT NONE
MTP40_RS10075 2099548 .. 2099580 - -21.5  -5.25699   ACCACACAAGAAAAA      TCCGAACCTCTTCCC ATC GGGAAAAGGTTCGGA      TTTTTCTTGTGCTGT 100 46
MTP40_RS10055 NONE
MTP40_RS10050 NONE
        rmuC NONE
MTP40_RS10040 2092443 .. 2092481 - -18.2  -4.60797   CCCGCATAGACAAAA   CGAACGCCTGCCGGGC TTTTCTC ACACGGCAGGCGTTCG   TTCGTTTTTATGGGG 100 49
MTP40_RS10025 2089924 .. 2089934 -  -2.6  -3.77808   TTGATTATAACACAA                 TTAT TTT ATAA                 TATCAATACGGCCTG  51 28
        uvrB NONE
        uvrA NONE
MTP40_RS10010 2084675 .. 2084704 - -17.3  -6.20267   CGAAAAACAAAAAAA       TTCCCAGCCGAAC AGTT GTTCGACTGGGAA        TCATCTGGTCCGAGT 100 31
MTP40_RS10000 2081267 .. 2081285 -  -7.3  -2.94099   GCTCTGGAGGATATA             CCCCCGC CGCTT GCCGGGG             AAATAGCACAGCCGG  59 200
MTP40_RS09995 NONE
MTP40_RS09990 2079996 .. 2080015 -  -3.4  -2.94099   CGCCCGGAGCACATA            GGCCAGCC CCCG GGCTGTCA             GTTTGCTGGCCCGGA  45 130
MTP40_RS09985 NONE
MTP40_RS09980 2077700 .. 2077717 - -12.7  -5.14563   CCGGCCATGAAAAAA             GCCGCCA TTTC TGGCGGC              AGGTTACATACTTCG 100 65
MTP40_RS09975 NONE
MTP40_RS09970 NONE
MTP40_RS09965 NONE
MTP40_RS09960 NONE
MTP40_RS09955 NONE
MTP40_RS09950 NONE
MTP40_RS09945 NONE
MTP40_RS09940 2070214 .. 2070225 -  -7.2  -3.63895   TCCAATCATGGTAAA                CGCC CGTA GGCG                 TAAAAATGAGACTGC  67 4
MTP40_RS09935 NONE
MTP40_RS09930 2069099 .. 2069113 -  -5.6  -3.39482   TAACAGCAGGCATAA               CAGGCG GAG CCCCTG               GGCGGCCTGTTCTCG  54 102
MTP40_RS09925 2068500 .. 2068535 - -19.2  -3.85698   TCCTCCTCTCAGAAA    GCGGGTACTTCGGGACA AAT TGTCCCAAAGT-CCCGC    TGTATGGATGTTGAC 100 134
MTP40_RS09920 NONE
MTP40_RS09915 2066908 .. 2066934 -  -3.5  -3.01726   TTCTTCCATACAAAT         CCTCCTATCGG TCACC CCGGTCGGGGG         CCTTTTTCTTATGGA  45 3
MTP40_RS09910 NONE
        mobC 2066354 .. 2066381 - -20.6  -4.23892   CCGAAGTAGTGAAAA        CCGGGGAGCGGC ATAC GCCACTCCCCGG         CAGGATCAGAGCTCC 100 31
MTP40_RS09900 2065880 .. 2065903 - -15.3  -5.07652   CCTTCCAAAAGAAAA          CGGCGGCTG TCCGTC CAGCCGCCG           CAGGGGGCTTCGGGA 100 58
MTP40_RS09895 2064330 .. 2064356 - -13.8  -3.59262   GGCCACACTCCGAAA         TTTTTGCTGGCC GCA GGCCCGCAAAAA         TGCTTGTTGGGGAGC  91 117
MTP40_RS09885 NONE
MTP40_RS09880 2061480 .. 2061509 - -10.7  -4.66163   ATGTGTAGTTAAAAA       TACGGGGCGATCA AATT TGACCGTCCCGCA        TTTTTCAAAATCGGA 100 30
MTP40_RS09875 2060484 .. 2060517 - -21.9  -3.70902   TTGTGTAGACGCAAA     GAAACGGCGGCTCTG AAAT CAAAGCCGCCGTTTC      AAATGGGCGTGAAAA 100 96
MTP40_RS09870 2059322 .. 2059360 - -19.7  -3.53012   TGTTTGGTGGGGAAA   CGCAACAGGCCAGCACC ACCGG GATGCTGGCCTGTTGCC   TTACTCCACCTTGGG 100 403
MTP40_RS09865 2058986 .. 2059011 - -14.1  -4.56133   CTCGAAGAAGCAAAA         CGAGCTGTAAC CGAA GTTACAGCCCG          CTTCTTTGCCGCAGC 100 16
MTP40_RS09860 2057080 .. 2057114 - -12.8  -4.72201   TCCGACAAAAAAGAA     TCCCCGGCAGCTCTGT ACG ATAGAGCCACCGGGGC     CAGATGGGGAATCTG 100 112
MTP40_RS09835 NONE
MTP40_RS09830 NONE
MTP40_RS09825 NONE
MTP40_RS09820 NONE
MTP40_RS09815 NONE
MTP40_RS09810 2052036 .. 2052064 -  -7.3   -2.9547   AAACACATGTACACA        CTGGGTGCCGT CCATCTC ACGGCTCCCCG        GTCTCTGCCATCATG  59 13
MTP40_RS09805 NONE
MTP40_RS09800 2050415 .. 2050457 - -16.4  -2.87794   AAGGTATTATGAAAC GTAACGGATACGGTGGACGT GTC AGGTCCATCGTATCCGTTGC TCTTCATAATAGATT 100 48
MTP40_RS09795 NONE
MTP40_RS09790 NONE
MTP40_RS09785 NONE
MTP40_RS09780 NONE
MTP40_RS09775 2044985 .. 2045000 -    -9  -2.60723   GGAGCTGCAAGCAAC              TGCGTC GTCA GACGCA               TTGCGCGCTGAGAGG  63 42
MTP40_RS09770 NONE
MTP40_RS09765 2042209 .. 2042234 -  -3.2  -3.03903   AAAATGCGGTTAAGA         GATCTTCGCG TGTATG CGCGAATCTC          CAGCATTTTTGCTTG  45 158
MTP40_RS09760 2041815 .. 2041847 - -19.8  -4.32678   CCTCCAAACAAATAA      CCCCCGGCACAGCG TGTGC CGCCGGGCCGGGGG      GATACATCTAAGCAG 100 108
MTP40_RS09755 NONE
MTP40_RS09750 2039258 .. 2039279 -  -5.1  -2.84276   ATTGCGAAGCAATGA           CGG-TGGGGT TTA ACTCCAGCCG           CTCCCCGTAAGAGAT  49 41
MTP40_RS09745 NONE
MTP40_RS09740 NONE
MTP40_RS09735 NONE
MTP40_RS09730 2025867 .. 2025895 -   -19  -5.76633   GGACATACAAAAAAA        GGGAGACCGTTC GGGGT GAACGGTCTCCC        TTTCTTCTAAGCAGG 100 118
MTP40_RS09725 NONE
MTP40_RS09720 NONE
MTP40_RS09715 NONE
MTP40_RS09710 NONE
MTP40_RS09705 NONE
MTP40_RS09700 NONE
MTP40_RS09695 NONE
MTP40_RS09690 NONE
MTP40_RS09685 NONE
MTP40_RS09680 2020548 .. 2020584 - -15.2  -4.45771   AGTCGAAAACACAAA   CTCAACCCCGAGGAACC ATCA GGCTCCCCGGGGCTG-G    TGCTATGTACTCTTA 100 38
MTP40_RS09675 2020019 .. 2020058 - -13.8  -4.87892   TCCGAAGAAAACAAA  TAATCCGAACCCATCTCC TATC GGAAACAAGTTCGGATTA   TTTTTGTTTGGTCCA 100 115
MTP40_RS09670 2019274 .. 2019308 - -12.9  -4.29472   CAAATTAAAACTAAA     CGGCCTGAGCCCTGT GCAAT ACAGGATTCAGACCG     TTGGGGTCGCTTAAT 100 380
MTP40_RS09655 2015703 .. 2015722 - -13.6  -5.18643   GGAAGCAAAAGAAAA            GGCGTGAC CGAA GTCACGCC             AAATCTTCCCCATTT 100 220
MTP40_RS09635 NONE
MTP40_RS09630 2010533 .. 2010571 - -23.2  -4.73682   CCGCATAACAGAAAA   GGCCCCGGCCACCGTTCA AAA CGAACAGCAGCCGGGGCC   ATATCTTAGTATTTA 100 38
MTP40_RS09625 2008840 .. 2008869 -  -6.5  -3.09015   CGCACAGCGATTGAA       TGGTAGAGTCTGCC CCC AGCACACTCT-CCA       TCTGCCCCAACATCT  55 488
MTP40_RS09615 NONE
MTP40_RS09610 2006073 .. 2006086 -  -2.4   -3.9712   CCATTTTACGAGAAA               GACA GCTTAT TGTC                AAGAGCCAACCGCAA  55 44
MTP40_RS09605 NONE
MTP40_RS09600 2004731 .. 2004743 -  -2.6  -4.02742   GAGAACAACATCAAA                CAGC TTCTT GCCG                CTGTCTTTGATCATC  56 232
MTP40_RS09575 2000918 .. 2000959 -  -8.8  -5.20781   GACGACAAAAGAAAA GCCGCCGATGG-TTTGATC TCTAC GATCAAGGCCACCAGCGAC CGTGTTCAGATAGAG 100 84
MTP40_RS09530 NONE
MTP40_RS09525 NONE
MTP40_RS09520 1991891 .. 1991916 -  -2.5  -5.41746   AATGGCGCAAAAAAA         CAGAGGCCC TTATTCTG GAACCTCCG          TTTCTCTGGCTTTCT  79 9
MTP40_RS09380 1962960 .. 1962972 -  -4.1  -3.23979   TCAACAGGAATGGAA                GAAAC GCG GTCTC                TCCTTCGTAGAAGAT  47 437
MTP40_RS09365 1960990 .. 1961010 -    -4  -3.05384   CTTCCCCGCAGGGAA           GCCAG-TGT CATA ACAGCCGGC            AGGCAATTTTCCGGT  47 40
MTP40_RS09360 1959827 .. 1959842 -  -4.6  -3.17146   TCCTTTTATAACACA              TGCCAC TTGC GGGGCA               CAAAGACATCCTCAA  50 0
        dnaG 1958017 .. 1958030 -  -3.7  -3.29471   GCCGGAGGAGAGGAA               CGGTC AGTC GTCCG                CAGGGTCTGTGCCCT  48 15
        rpoD 1956867 .. 1956888 - -15.9  -4.65895   CTGCCCATGCAAAAA           GCACCGCAG CTGC CTGCGGTGC            CCTTATGTGCTCATT 100 36
MTP40_RS09345 1952643 .. 1952660 -  -7.7  -3.39216   TCTCTAGTTAAAAAT             CCACTTC GTCG GAAGCGG              GAGCCGCACTGCCGG  64 0
        rpoC 1948967 .. 1948998 - -20.2  -5.37593   TTTCAAATCAAAAAA      GCCGCCCTCCCCTG CGTT CAGGGAAAGGCGGC       TCATGGATTGATTCA 100 60
        rpsL 1948127 .. 1948145 -  -3.8  -2.68736   GAAAGTAATAAAACT             CCCGTTGT GTC ACAAAGAG             CTGACCTTACATAAA  44 111
        rpsG NONE
        fusA 1945401 .. 1945430 - -10.9  -3.83026   TGCTTTTACAGGAAA       TTTTGCCGGAGCTA CAC TA-CCCCGGCAAAA       TTTTACTTTGTTTCA  85 46
         tuf 1943998 .. 1944029 - -19.6  -4.62069   CTGTTAGCGCAAAAA      GAGCCTTCCCACTC TCCG GAATGGGAAGGCTC       TTTGTAAGTTTAACC 100 73
MTP40_RS09315 NONE
        guaA 1941425 .. 1941479 - -25.5  -5.00196   GCGTAAAGAATAAAA GACACAAAAATGCCCTCTGAAAAAC TTACC GTTTCTCAGAGGGCATTTTCATGTC TCTCTTTATGAATAA 100 126
MTP40_RS09300 NONE
MTP40_RS09295 NONE
MTP40_RS09290 NONE
MTP40_RS09285 NONE
MTP40_RS09280 1937372 .. 1937421 - -21.1  -3.51232   TTTCGTCGAAAGTAA CGCAAAAGCA-CTTTTGACAGACG TTC CGTCCATCAAAAGATGCCTTTGCG CCCTGCCGGGGGCTT 100 156
MTP40_RS09275 1935982 .. 1936035 - -11.2  -2.97995   AAGAGTAAAATATCA CT-TATATGTA-CAGCCCCCGCCAAC ATTC GCTGGCGGGGGCTGCTATACTTACAG CTCTACGTTGTTCTG  74 20
MTP40_RS09265 NONE
MTP40_RS09260 1932557 .. 1932568 -    -3  -3.19192   TTTTATTCAATTGAA                TTTG TTTC CAAA                 TACCTGTCAAAATCG  45 1
MTP40_RS09255 NONE
MTP40_RS09250 1930252 .. 1930262 -  -3.2  -3.04461   CACTCAGCGGCAACA                 TGGC ATA ACCA                 AACACATACTGTAGG  45 44
MTP40_RS09245 NONE
MTP40_RS09240 NONE
MTP40_RS09235 1925760 .. 1925793 - -14.7  -4.97405   ATTGATAAAAACAAA     TGCCGAAAACCCGCA TGAA TACAGGCTTTCGGCA      TTTTGATCCATTACT 100 226
MTP40_RS09230 1925079 .. 1925095 -  -2.9  -4.03078   CTATTATAGCATAAA              GTGTCCC ATC AGGAAAC              CCATTCATAAGGCCT  56 45
MTP40_RS09225 NONE
MTP40_RS09220 1923891 .. 1923913 -  -8.5  -5.96219   GAGCCACAAAAAAAA          GGGCG-ATGA TCTC TCATACGCCC           CAGAACAGGATTCCC 100 16
MTP40_RS09210 NONE
MTP40_RS09205 1921548 .. 1921570 - -15.6   -5.4251   CTGACAGACAAAAAA           GGAGACCGCA CCG CGCGGTCTCC           TTTTTGCGTTACAGG 100 34
MTP40_RS09190 1918435 .. 1918448 -  -3.1  -2.70708   AATTTAAGGATATTA               TAGCA TTTA TGCCA                GATACGGGTCAAGCA  41 18
MTP40_RS09185 1917723 .. 1917759 - -22.5  -4.49337   TTATAATCCATAAAA    CGACCCCGGAAAGCT GCAGTCA AGCTTTCCGGGGTCG    TTTGTTGATCATCGC 100 34
MTP40_RS09155 1909961 .. 1909990 -  -5.8  -3.85698   TCTTTTTGTCAGAAA      CGCCGGGCTCAGCT CCGC AGCTGAACC-GG-G       TTGGAGCTGCCGAAG  64 4
MTP40_RS09150 1909349 .. 1909388 - -19.4  -5.14965   AGCCCCAGCAAAAAA  GACCAGAGTTGTTTCGCC AAAA GGCGTTACAACTCTGGTC   TTTTGCTTTCTTTCA 100 63
MTP40_RS09140 NONE
MTP40_RS09135 1904181 .. 1904212 - -21.6   -4.9725   ATTTTTACACAAAAA      CGCCCTGCCCCGGA AAAG CCCGGAGCAGGGCG       CTGAACATCGTATCA 100 38
MTP40_RS09130 NONE
MTP40_RS09125 1899613 .. 1899665 - -24.9  -5.38047   GACTGAGACAAAAAA CACTCCCCTTCGGGTGGAGCCGTGC GGC ACACGGTCCTGCCCGAAGGGGAGTG TTGCTGTTTAAAAAG 100 43
MTP40_RS09110 NONE
MTP40_RS09105 1893931 .. 1893964 - -14.7  -4.65895   TTTTCCACGCAAAAA     CGCCGTCTCTTGC CTTTTTGC ACAAGAGACGGCG      TTTGGTTCAGTTGCT 100 40
MTP40_RS09085 1891858 .. 1891891 - -14.7  -4.39426   CAGATTCGCACAAAA     GAAACACCCTGTACA TTTC TGCACGGGGTGTTTC      TCATTACTGCATCTT 100 52
MTP40_RS09080 NONE
MTP40_RS09075 1891220 .. 1891244 - -20.1  -4.41353   CCAGATACAGCAAAA          CGAGGACAGCC ATT GGCTGTCCTCG          TTTTTTGCTTCAATC 100 35
        prfB 1882966 .. 1882995 - -21.5  -4.41494   CACCTGTAACCAAAA       GAGGGACCCCGCC CAAC GGCGAGGTCCCTC        TGACATTTTATGATA 100 45
MTP40_RS09020 1875188 .. 1875226 - -18.9  -5.00895   TTTACCATAGAAAAA  GGGCCCGTCTGCGCGCAC CAAA ATGCG-GCAGGCGGGCCC   TTTCGTGCTTATCCC 100 34
MTP40_RS09000 1870370 .. 1870396 - -11.5  -5.36441   CCCCTATAGAAAAAA         GCCGGTGCGCC AAGAA AGTGCACCGGC         TTTTTCTCTTCATAT 100 35
MTP40_RS08985 NONE
MTP40_RS08980 NONE
MTP40_RS08975 1867517 .. 1867536 - -12.2  -3.54436   TACAGAGGCATATAA            GCTGCTTC CAGA GAAGCAGC             AGCGACCCGGATCGG  86 27
MTP40_RS08970 NONE
MTP40_RS08965 1867307 .. 1867344 -  -9.1  -5.31456   TCAACGTACAAAAAA   GCCGCTGCATCACACGA CGAA TCATGTTTTGCAGTGGC    TTATTTGTCTGGAGC 100 35
MTP40_RS08960 NONE
MTP40_RS08955 1863501 .. 1863547 - -19.8  -4.96848   TTTGGCATACAAAAA CACCCCATTTCCTAAACAGTAT ACC ATACTGTCTAACAAATGGGGTG CAGTTCATCTCAGGT 100 62
MTP40_RS08950 NONE
MTP40_RS08945 1862242 .. 1862252 -  -4.6  -4.12532   CGGTGCAGACAGAAA                 GGCC GCT GACC                 CATCTTGATATGAAC  62 65
MTP40_RS08940 1861200 .. 1861228 - -13.2  -3.76811   CAGATCACCAAAACA        GCCTCAGCCC TTTGAGATC GGGCTGAGGC        TTTTTCATCCGCATT  93 42
MTP40_RS08930 1859538 .. 1859584 - -18.9  -3.31269   CGCATATTACAGCAA TGTAAAACGCCCGCTCCGG GGTCAGAAG CCGGAACGGGCGTTTTACG TTTTCTCTTTTTCTG 100 41
MTP40_RS08920 NONE
MTP40_RS08915 1856645 .. 1856695 - -18.5   -5.0916   GCTCCAATAGAAAAA CATATCCCCCGCTGC-AGACGTGC CAGA ACACGTTTTGCAGCGGGGGATATT TTATGTTCTCTTCTT 100 26
MTP40_RS08890 1852688 .. 1852716 -   -14  -5.50723   TGATCAAAAGAAAAA        GAACGCCAATTC TCAAC GAACTGGCGTTC        TTTTTTATGGAGCAG 100 33
MTP40_RS08785 NONE
MTP40_RS08780 NONE
MTP40_RS08775 NONE
MTP40_RS08770 NONE
MTP40_RS08765 NONE
MTP40_RS08760 1836237 .. 1836250 -  -2.4  -3.07816   TCCCTACCGATTGAA               TGGT ATGCGA ACCA                GTGACCGCGCCGCTC  42 94
MTP40_RS08755 1835603 .. 1835639 - -21.1  -2.66316   TTCGTGATGACAGTA    GAAAAGGCCCGTAGG TTAAACG CCTACGGGCCTTTTC    TGTTACTTATTTACC 100 32
MTP40_RS08610 1812718 .. 1812745 -    -9   -3.6682   CCTGATCTATCTAAA        CGCTCTCGGTGC GCCA ACACCGGGGGCG         TTTTTGCATTTTCAG  74 319
MTP40_RS08605 1811341 .. 1811376 - -13.4  -3.94846   GCATCAAAATGCAAA    GCGCCCCAACATGT TCTTTACC ACACGTTGGAGCGC     TATTTTCTGGAGCAG  95 188
MTP40_RS08600 1810294 .. 1810318 - -12.2  -4.59773   CCGCAGGCGGAAAAA         TGCTCCCGCAG CAGT CTGCGGG-GCA          AATTCAGAAAGGGTG 100 296
MTP40_RS08595 1809035 .. 1809090 -  -5.5  -5.24129   TTTGTTCAGAAAAAA GCCATGACAGCAGGAACAAAATGCAA GATCA TTTCAATG-GTCACCGCTGTCATGGC GATCGGTTTTCTTTG  88 227
MTP40_RS08585 NONE
MTP40_RS08580 1805526 .. 1805561 - -21.9    -3.484   TTGAGCATACCAGAA    CGCCCCCTGTGTGCC TGCTGC GGCGCACAGGGGGCG     TTTTTATCATACGTC 100 39
MTP40_RS08570 1803405 .. 1803428 - -15.4  -5.32699   TCAAATAGCAAAAAA          GAAAGGACGC TTTC GCGTCCTTTC           TTTTTGTTCTGTCAC 100 41
MTP40_RS08555 1797940 .. 1797969 - -19.3  -4.47259   ACCAGAACAGCAAAA       CGCCCGCGCAGGA GCTT TCCTGTGCGGGCG        CTGCATTTCTTTTTT 100 46
MTP40_RS08550 1797060 .. 1797097 - -22.7  -4.88228   ATCGAATACTAAAAA   CGCCCGGAGAACCGCAG CTTT CAGCGGCCCTCCGGGCG    TTTTTGTGTTTACTG 100 35
MTP40_RS08535 NONE
MTP40_RS08530 NONE
MTP40_RS08525 1793724 .. 1793761 - -24.3  -3.84674   ACCGTATGATAAGAA   CAACAGGCGGTGCCGGA AACT TCCGGTACCGCCTGTTG    TTTTCTGTTTTACTG 100 35
MTP40_RS08505 1789327 .. 1789356 - -13.5  -5.14563   CTGTGCAGCAAAAAA       GAGCACCCGCGCC TGCC GGAGCGGATGCCC        TGTAAATGCTGATTC 100 57
MTP40_RS08500 1788552 .. 1788588 - -11.6  -5.14563   CTGTTCATCAAAAAA   GCCTTTCCAAC-GGGCC GGAC GGCGCAGATGGAAAGGC    CGGGTTTCATGCGGG 100 43
MTP40_RS08495 NONE
MTP40_RS08490 1785930 .. 1785969 - -18.6  -4.67038   TCTGTAAAAGCAAAA  CATCCCCGCACGGCCTGC CGAA ACAGGAAGTGCGGGGATG   CCTTTTTGTTCAGAG 100 35
MTP40_RS08480 1782871 .. 1782901 - -10.5  -2.83504   CGGGCACGAAAACAG      CCGTTCCAC-CTGC TGCA ACAGTGCGGAACGG       TTTCTTCGTTATAAG  71 128
MTP40_RS08475 NONE
MTP40_RS08470 NONE
MTP40_RS08465 NONE
MTP40_RS08460 1777790 .. 1777826 - -14.5  -5.44119   GGCAGGTGAAAAAAA    GCGGAGACGTTCTGACC GAA AATCAAAACGCCCCCGC    AAAAAACCGAACATG 100 321
MTP40_RS08455 NONE
        mobB NONE
MTP40_RS08445 1774856 .. 1774874 -   -16  -3.06796   TTTCACCTTAGTTAA             GCTCCCCC TTC GGGGGAGC             TGGCAAAGCCGAAAG 100 59
        moaC NONE
        moaA NONE
MTP40_RS08430 NONE
        modA 1771437 .. 1771449 -  -3.3  -2.63913   TACCAGTCCATACCA                TCCCC CCA GCGGA                TGCTTACAGTGTGGT  42 29
        modB NONE
MTP40_RS08415 1769661 .. 1769700 -  -7.2  -5.40072   CTTTTTTCAAAAAAA  TTCTCCCTGCTCC-GTA TTTCTGT TTCGGGAGCAGGGAGAG  AACGATTTTTTGCCT  93 40
MTP40_RS08410 NONE
MTP40_RS08405 NONE
MTP40_RS08400 1767238 .. 1767273 -  -9.9  -5.32944   TTGAGAACGAAAAAA    GGTGTTGTTCTGC AATACACTCA GCAAAACAACACC     TAGAAATTCTAAGCA 100 259
MTP40_RS08395 1766071 .. 1766129 -  -9.3  -5.22006   GCAGCAGAATAAAAA GCAAAAGAGATGCACCCCGCCTTCCTGAA ACCGG TTCAGGGAG-CGGGGTGCATCTCTTT--- TTGCTCTGTTTTATT 100 73
MTP40_RS08380 NONE
MTP40_RS08375 NONE
         glf 1759628 .. 1759646 -  -8.8  -3.75153   CTCCCGCAAGTGAAA             CGGGCCAT TCC ATCGCCCG             CCCTATTGCCGCTGC  71 108
        rplI 1759011 .. 1759032 - -17.3   -4.7416   CCAAAACGCCAAAAA           CGCCCCCTG AAGG CAGGGGGCG            CAGATGGCATTTCAA 100 41
        dnaB NONE
        tilS NONE
         hpt 1755478 .. 1755491 -  -5.9  -2.84192   CAGATCATCAGGACA               CCGGC CAGT GCCAG                CGCCAGGATCAGGGG  52 100
        ftsH NONE
MTP40_RS08340 1752263 .. 1752285 - -15.6  -5.68023   GTACAACCAAAAAAA           CGGAGGAAGC GCA GCCTCCTCCG           TCATTCATTTACATC 100 34
MTP40_RS08335 NONE
MTP40_RS08330 1750497 .. 1750518 - -14.5  -5.06414   CCTCTCTAACAAAAA           TTCCCGCTC GATG GAGCGGGAA            TTTTTTGTTATCATC 100 64
        yfcE 1748286 .. 1748297 -  -2.2  -2.66435   AGTTTTATCATACCA                TACC GGTG GGCA                 AATTTCAAGCTGCCC  39 64
MTP40_RS08315 1747802 .. 1747815 -  -3.1  -3.33315   CCAAGATCCTCATAA               CAAGA TACC TCCTG                TTTTGCATGATCAGC  47 62
MTP40_RS08310 1746801 .. 1746826 -    -9   -5.1485   GAACCAATAGAAAAA         GCCTGTCAGC GCAAAA ACCGACAGGC          TTTTTCTCATGCTCC 100 57
         pta 1741102 .. 1741130 - -15.3  -5.11836   ACATGCAAAACAAAA        GCCCCTTCCGGCA TTA CACCAGAAGGGGC        AGAGTGCTGAATAAA 100 43
         ffs 1740770 .. 1740816 -  -5.6   -5.4505   CCTTTCAACAAAAAA GCCGGGCAGCGC-TGACGGGG TTTGAC CCCCGCCTTGCGTAACTCGGC ATACGGATGCAGGCT  87 29
        dnaX NONE
MTP40_RS08275 1738537 .. 1738555 -  -4.4  -3.73775   TCCACTTTGATCAAA             GGCCGGGA ATG TTCAGGCC             GCCGGTCAGTTTGCC  55 2
        recR 1737872 .. 1737901 - -16.5  -2.90065   ATTCCATAAACAGCA       CAAAGCCCCGCGC GCAA ACGCAGGGCTTTG        AAATACAACTGATCA 100 38
MTP40_RS08265 1735621 .. 1735635 -    -5  -3.55444   GCTTGACCTTTCAAA               CGTTCT TTC AGAACA               TTTGGTATCCTCTTG  55 275
MTP40_RS08260 NONE
         rrf 1732499 .. 1732532 - -13.3  -5.20333   CACGCACAACAAAAA     CAAACCCCTGAAGAA TTTC TTCCTCAGGGGTTTC      ATGCAAGTCGGCGAC 100 31
MTP40_RS08250 1728700 .. 1728737 - -16.3  -4.56597   CTTTTTCTGCAAAAA   GTGGGGCCGCCCCACAA AAAT TTGTGCAGCGGCCCCAA    GCCAGTTTAATATTT 100 71
MTP40_RS08245 1727704 .. 1727721 - -12.7  -4.96848   CCGGGCACAGAAAAA             GGGAGCG CATC CGCTCCC              CTGTTCAGGACCCCC 100 30
MTP40_RS08240 1726874 .. 1726889 -  -3.9  -4.17048   TCCGCTCTAAAACAA              CCGGG AAACAG CCCGA               ATTATCAATCAAAGT  62 45
MTP40_RS08235 1725599 .. 1725630 - -13.8  -3.63627   TTCTGATACGGGAAA      GCGGAGAAGAACCA AAAT TCGCTCTTCTCCGC       TGATTTTATTGTAAA  93 114
MTP40_RS08230 NONE
MTP40_RS08225 1723738 .. 1723778 - -28.5   -3.0976   CCCAATACTCTAATA  GAGAACCCCCCTGCCGG TGATCTC CCGGCAGGGGGGTTCTC  TATGCTTTAAGAAGC 100 68
MTP40_RS08200 1716670 .. 1716687 -  -2.6  -2.85909   AAAATTTTACAATCA             GCGCCC CTTACC AGACGC              AATCCTCGCTGCAAG  42 15
MTP40_RS08195 1715105 .. 1715122 -  -4.8  -4.36914   CGTTGCTTCACAAAA             GCTCCC TGTCAG GGGAAC              TTCTGCAAAACAGAC  67 58
MTP40_RS08190 1714221 .. 1714263 - -20.1  -5.68489   CATAACAACAAAAAA GGCCCTCTCCGTCA-TGCTT TGTA AAGCAATGATGGAGAGGGCC TTTTTTTCTTAAAAT 100 34
MTP40_RS08180 1712588 .. 1712619 - -12.3  -5.63517   TTTGCAAACAAAAAA      GCGCCCACAACGG CTTTCC CCGCTATGAGCGC       CTATTCAATCGTGGG 100 66
         cls 1710951 .. 1710970 -  -3.4  -4.07885   CACTTGCGTGGAAAA            GCTCCCAG AGTG CTGCGCGC             AGCCGCTTACATCAA  58 32
MTP40_RS08170 1709638 .. 1709666 - -18.2  -5.54907   TTGACAAAACAAAAA       CGCCGCGTC-GGC AGCT GCCAGACGCGGCG        AGATGTTTCTCTCTG 100 117
MTP40_RS08165 1708550 .. 1708570 - -11.1  -5.07486   CATCGGCAACAAAAA            GCCTCCCTC ACC GAGGGAGGT            TGCATCGCATAGCGA 100 66
MTP40_RS08160 NONE
MTP40_RS08155 1706959 .. 1706992 - -15.2  -4.67943   GTGCAAGAGATAAAA     CCGCCCCGGCGTGC GTCTCT GCACTCTGGGGCGG      TTCGGGTCATTCTGA 100 32
MTP40_RS08150 NONE
MTP40_RS08145 1706074 .. 1706107 - -14.5  -4.34402   CTCTGTACAGCAAAA     CCGCCCCGGCGTGCA TCTC TGCATTCCGGAGCGG      TTCGGGTCATTCTTC 100 32
MTP40_RS08140 1705482 .. 1705507 -  -9.7  -4.82901   TTTTTCCGACAAAAA         CGCCCTGCC GCGCAATG GGCAGGACG          TTTTTGTTCATGTGG 100 89
MTP40_RS08135 1704023 .. 1704058 -   -22  -4.69053   TACTAGGCAACAAAA    GAGCCGCCCTTCTGCG GTTT CGCAAAAGAGCGGCTC     AATTTTTACAAGTTT 100 31
MTP40_RS08130 1701614 .. 1701630 - -10.9  -2.93893   AAGTATAGACCAAAC              CTCTCCT AGT AGGAGAG              CTGACGCAAAGCGCC  74 48
MTP40_RS08125 1700457 .. 1700467 -  -8.2  -2.72379   CCAATTTCTTAACGA                 GCCG GGC CGGC                 ACCCCATTTAACGGC  61 33
MTP40_RS08120 NONE
MTP40_RS08115 1698681 .. 1698711 - -17.6  -5.36441   GTTGTACATAAAAAA       CCGCCCTTCCTGTA CAG CACAGGAGGGGCGG       CAGTGTTCAGATAAA 100 43
MTP40_RS08110 NONE
        thyX NONE
MTP40_RS08100 NONE
MTP40_RS08095 NONE
        mltG 1692453 .. 1692463 -  -2.4  -3.53091   ATCGGTTTCTGCAAA                 CCTG ACT CCGG                 AGCCGCAGTTGGCAC  47 82
MTP40_RS08085 NONE
MTP40_RS08080 1690948 .. 1690987 - -22.4  -3.66028   TAGAACTGCGAACAA  GAAAACCGCCCTGCCGTA TAGC TACGACAGAGCGGTTTTC   TGCTGTATGGACTCG 100 32
MTP40_RS07975 1664669 .. 1664693 - -14.3  -3.16534   ATCAATCATATCGAA          GCGGAGCAGAT TTT AGCTGCTCCGC          TTCTTTAGTATTTTT  90 214
MTP40_RS07930 1655790 .. 1655802 -  -5.5  -5.79595   CGGCAAAAGAAAAAA                GCCGT CGT ACAGC                AGACATATCCGCGCG 100 269
MTP40_RS07890 1650137 .. 1650163 -  -9.5   -5.2696   GCAAAATGCAAAAAA         TAAGAGGACGC TTTTT GCATCCTCTCA         ATGACCATGCGTGGC 100 43
        mobC NONE
MTP40_RS07880 NONE
MTP40_RS07875 NONE
MTP40_RS07870 1647079 .. 1647118 -   -12  -4.67038   TTGTCAAAACGAAAA  TAGCCGGACACGGTGGCC TTGT GGCTGCTGTGTCCGGCTG   TTTTTCTGTCAATCA 100 38
MTP40_RS07840 1638969 .. 1639006 - -14.9  -3.96148   CTCTCTTATCATAAA   GGAACCGGGTCTACCCA TTGT CGAGCAGACCCGGTTCT    CATTTTTCAAAATCG 100 227
MTP40_RS07740 NONE
MTP40_RS07735 NONE
MTP40_RS07730 NONE
MTP40_RS07725 NONE
MTP40_RS07720 1614286 .. 1614326 - -15.8  -5.14965   ACCTCCATGAAAAAA  TCTGTATGTATGAAAGGA AATGA TCCTTTGATACATACAGA  TTATCGCATAGGAAT 100 97
MTP40_RS07715 NONE
MTP40_RS07710 1610886 .. 1610917 - -15.2  -2.51871   CCTTAGATTAAAACT      CAGCCCTCTGCC TTTTCCTT GGCAGAGGGCCG       TTTTTTGCTTAACAG  95 41
MTP40_RS07690 1606489 .. 1606527 - -16.9  -3.92324   CCCTGTAACATGAAA  GAGCTTCACAATTCCGGC TTCT GCCGG-AGTGTGAAGCTC   TTTTTGTTTGGCCGG 100 51
MTP40_RS07630 1596478 .. 1596515 - -16.3  -3.85698   GTTTCTCCCCATAAA   GCAGCAGCACCCCGCCA TTTC TGGTGAGGTGCTGCTGT    CGTTTTGGAAAACAT 100 65
MTP40_RS07625 1595483 .. 1595518 - -19.9  -5.46657   GATCGCAACAAAAAA    GCAGCTGCACTCCGT GTTTTT ACGGAATGCAGCTGC     TTTTTGCTTGTATTA 100 42
MTP40_RS07595 1586782 .. 1586801 -  -5.6  -4.58283   CAACGCGCTGAAAAA            GCTGGCCG GCAT CGACCAGG             AGCTTGACCTCGTTT  75 414
MTP40_RS07570 1581990 .. 1582013 -   -16  -4.36931   TAAGGCATAGCAAAA          CTCCCGCCCG GCTC CGGACGGGAG           TTTTTTCTGTGTGGC 100 48
MTP40_RS07555 1577959 .. 1577990 -   -21  -5.49569   GATCAACATAAAAAA      CGGCATCGCAAACC AATC GGTCTGCGATGCCG       TTTTTGCGTTTCGCT 100 43
MTP40_RS07545 1574244 .. 1574271 - -14.2   -4.8622   CCTTTCAACCAAAAA        CAGCACGCCG AAGCCGAA CGGCGTGCTG         TTTTTTCTGGTTCTA 100 44
MTP40_RS07515 NONE
MTP40_RS07510 NONE
MTP40_RS07505 1567483 .. 1567517 -  -6.2  -5.64421   ATCTCAAACAAAAAA     GCCCGACAAAGCTCCC TCC GGCAGCACCGCCCGGC     ATCCCATTCCCACAT 100 300
MTP40_RS07485 1564400 .. 1564424 - -11.5  -3.30364   CGCATAACAAGAAAT          GCTCTCCTG TGCTTAG CAGGAGAGC          GTTTTTGTTTACAGC  82 34
MTP40_RS07470 NONE
        aspS 1558538 .. 1558553 - -10.4  -2.51547   CGTTCATACGAACAC              CCCCGT CCTT ACGGGG               TCAGACGGTTGGGGC  69 18
MTP40_RS07460 1556890 .. 1556915 -  -3.1  -3.75153   GCGCTTCAACGCAAA         CGCTGCCTGCA TTGG TGCGGGCATGG          AGCGCCTGATCCAGA  52 431
MTP40_RS07415 1548213 .. 1548249 -   -16  -4.48987   CTCTTATAACGAAAA   GACAGGCGGC-TCCAAC CAAA GTTGGATGCCGCCTGTT    TTACTGTTCAGATCA 100 33
      spoIVA 1545464 .. 1545502 - -13.9  -4.40003   TGGCATAAACAGAAA  GCCACCCGGTCACAGACG GAAA CG-CTGCGACCGAGTGGT   TTTTAGCTGTTACAG 100 35
MTP40_RS07340 NONE
MTP40_RS07335 NONE
        miaB 1531835 .. 1531851 -  -2.3   -3.4285   CGATGCAATCCATAA              TCAAAAA TCT CCTTTGA              TGTGTTTGTTTTTAT  45 76
MTP40_RS07325 1531386 .. 1531409 - -10.3  -4.45664   CGAATGGAAGGAAAA          CGCGGCCTGC GATTT GCAG-CCGCG          TTCTCATTTTACCTG  90 41
        mutS 1528690 .. 1528704 -  -7.1  -2.83403   TGTTTTTTAGGAAAT               CAGCC GTTCA GGCTG               CCCTTCAAGGTCTTT  57 10
        mutL 1526486 .. 1526497 -  -3.6  -2.70932   CCGTGGGGCCAACCA                CGGC CAGC ACCG                 GGTGCTTTTTGTTAC  42 37
        miaA NONE
MTP40_RS07305 NONE
MTP40_RS07300 NONE
MTP40_RS07295 1522865 .. 1522875 -  -2.4  -2.78384   TGCGGGGTCAGCATA                 GTGG TTT CCTC                 CCTTTTCATTCAATA  40 35
MTP40_RS07290 NONE
        ileS 1519184 .. 1519213 - -17.2   -4.8048   TTCTGATACCAAAAA       GCGGCGCTCCCT GCTCGA AAGGAGCGCCGC        AGCGTTTATTTCAGG 100 46
        lspA NONE
MTP40_RS07275 NONE
MTP40_RS07270 1516827 .. 1516853 -  -7.3  -5.04249   TCTCTAAAAAAGAAA         GCCCTCTGC GGAGAATTT GCAGAGAGC         TTTACAATGATTTTA  88 38
MTP40_RS07265 NONE
        ppk1 1514034 .. 1514061 - -17.8  -4.50058   CACTGAGAACCAAAA        CACCCCCTGGGA GATT TCCCAGAGGGTG         CTCTTTCCGTATTTA 100 38
MTP40_RS07255 1513406 .. 1513434 -    -3  -2.54523   CCATACCGGAATCGA        TGCCGCATCATG GCAGG CTCAGTGCGGCA        GAAGGATCATACCGG  40 4
MTP40_RS07250 NONE
MTP40_RS07245 NONE
MTP40_RS07240 1510389 .. 1510425 -  -8.1  -4.07568   CTGTTCTGCCCAAAA   GGCA-TTCTTTGCCCG GGAAAT CAGGCAAAGAGCTGCC    GATCCGCCGTCAGGA  73 9
        rplS 1509800 .. 1509831 - -15.4  -4.15044   CTGGCCCGGAATAAA      GAAAAAAGGGACAA CAAG TTGTCCCTTTTCTC       CCGGTTTTACGCGGG 100 46
        lepB NONE
        ylqF NONE
MTP40_RS07220 NONE
MTP40_RS07215 NONE
        thrC NONE
MTP40_RS07205 1504887 .. 1504900 -  -3.7  -2.71712   TTCTGTTTGCGAAAT               GCGGG GACG CGCGC                GCTCAATTGGGTGCA  42 133
         tig 1503357 .. 1503396 - -13.8  -4.11394   ATTCTATTTGCAAAA  TTGACCGATACGGC AAAAGAAACAGG GCCGTATCGGTCAA   TTTTAACAACCTTTG 100 97
        clpP NONE
        clpX 1501276 .. 1501306 - -10.5  -5.49809   CAAATTGCAAAAAAA      GCCCCGCCAAA-GC CGAA GCATTTGACAGGGC       ATCCCTTCCCTGCTG 100 58
MTP40_RS07185 1499781 .. 1499816 -   -14  -4.57063   CCAAAATATAATAAA    CCTCCGCCGCGCAGAA AAAC CTCTGCACGGAGGAGA     TTTTTTGCAGAATAA 100 46
        secF NONE
        nrdR 1496829 .. 1496877 - -19.9  -3.29144   TGAGGCTGTGCACAA TAAAAAGCCAGGCTTTCTCGTGA AGT TCACGAAAAAGTCTGGCTTTTAA CGCTGGAACCTTAGT 100 36
MTP40_RS07160 NONE
MTP40_RS07155 NONE
MTP40_RS07150 1492246 .. 1492265 -  -7.8  -3.21395   ACCGGGTGGATAAGA            GCCGG-AGC AAG GCCACCGGC            GGCACCGGTCTGGGG  59 145
        hprK NONE
        murB NONE
        rapZ NONE
        whiA NONE
MTP40_RS07110 1480811 .. 1480822 -  -2.2  -2.51871   GCTCAGATCAAAACT                TGCC TTTA GACA                 TTATAACACAGTTCC  39 157
        pfkA 1479667 .. 1479700 - -19.7  -4.53705   AAGCGGGACACAAAA     GCCCCCGGAGAA-CGT TTC ACGGCTCTCCGGGGGC     TGATTTTACGCATTA 100 66
MTP40_RS07100 1478437 .. 1478451 -  -5.7  -4.25502   TTCAAAAACAAAATA               CAGCA AAAAG TGCTG               CCGGTGGCTCGGGAG  69 73
        ligA 1476326 .. 1476353 - -11.3  -4.63586   ACAGGACACAGAAAA        GCCCGCACAGC ATCCAA ACTGTACGGGC         TTTATAGAACAGGTT 100 47
MTP40_RS07090 NONE
MTP40_RS07085 NONE
    spoIIIAC 1474670 .. 1474701 -  -6.6  -3.08867   GCAATGCCGAACACA      GCCACGGT-TGCACT CAT AGTGCAAACAGCGAC      TTGATGGTAACGAAC  55 7
MTP40_RS07075 NONE
MTP40_RS07070 NONE
MTP40_RS07065 NONE
MTP40_RS07060 NONE
MTP40_RS07055 1471705 .. 1471723 - -11.7  -4.57073   CACTCCCTGCAAAAA             CGCCGCT GGAAA AGCGGCG             CTCAATTTCATTGTT 100 85
        radA NONE
MTP40_RS07045 NONE
MTP40_RS07040 1468348 .. 1468358 -  -2.4  -3.39668   TCTGAAATCTCAGAA                 CCAG CAG CGGG                 AAGAGAGAGGAGGGT  45 228
MTP40_RS06985 1456453 .. 1456496 -  -7.6  -4.99638   AGATGCATAGAAAAA TCCCCCCAGAGATTTCTGAC TGCAGT GTCAGAG--CTCTGAGGGGA TTTTGCGTGTCAAGA  86 96
         asd NONE
        dapA 1449076 .. 1449104 - -13.9  -3.66178   TGTTGTAACGGCAAA        TGCCCGGGAGAAA CCA TTTCCACCGGGCA        TTGTGCGTTGTTTCG  95 42
        dapB 1448274 .. 1448296 -  -6.3  -3.06009   CAAAATGGTGGAAGA          CGCAGAGACC TTAC AG-CTCTGCG           ATCATGTTACCCATA  55 13
MTP40_RS06925 NONE
MTP40_RS06920 1446369 .. 1446403 - -25.8  -4.46926   CAGCGTATGATAAAA     GCCCGGCGGCATCCGA TTT TTGGATGCCGCCGGGC     TTTTTACGTTTATGT 100 63
MTP40_RS06845 NONE
MTP40_RS06840 1431656 .. 1431682 - -13.7  -4.63107   ATTAAATAAGCAAAA         CAGCCCGGAGC GAAAA ACTCCGGGCCG         TTTTCAGGTGCAGAT 100 29
MTP40_RS06770 1417251 .. 1417297 -   -14  -4.67635   CTGAAAAGGATAAAA TAAAATCTCCCACTGACG GGGTTCGATGT CGTCAGTGGGAGATTTTT ATCGTTTTACGGTCA 100 54
MTP40_RS06735 1410702 .. 1410741 - -19.3  -4.42788   TGTAATGGCAGAAAA  CTCCCCGCCCAGCGCCC AAGACA GGGCATTGAGCGGGGAG   TTTTTGTGTGCTGTT 100 40
MTP40_RS06700 NONE
MTP40_RS06695 1404086 .. 1404111 - -13.3  -5.24129   CGGTGGCATAAAAAA         TCCCCTTCAGC GTAA GCTGAGGGGGA          TTTTTTACTGTTGTA 100 88
MTP40_RS06625 1388817 .. 1388860 - -15.7  -4.63486   AGCGGCGCAATAAAA TACCGCTGCTC-T-TGCATTT GGGG AAATGCACAAGAGCAGCGGTA TTTTTGTATGCATAT 100 136
MTP40_RS06600 1384139 .. 1384189 - -17.3  -3.53012   GGCTTTGGTTGGAAA GCATAAGA-AAATCCCACGATCTA TCGC TAGACCGTGGGATTTCTTTTATGC GAGGGAGGGGACTCG 100 23
MTP40_RS06590 1382514 .. 1382533 -  -5.6  -3.65351   TGACCCGCATGGAAA            GCCCCACC CCGC AGCAGGGC             TTCTTCTCCGGCTGG  58 494
MTP40_RS06550 1375734 .. 1375771 -    -2  -3.59979   CCCTGTTATTTCAAA  TTGCTGCCCGGCACTGCC TCGG GGCAG-GCCGTAAAG-AA   TCACTTTCTTATAGT  47 51
MTP40_RS06545 1375125 .. 1375157 - -17.2   -4.4078   GTGCTGGAACTAAAA      GAAACGGGACTGTT TTTGC AACAGCCCCGTTTC      TTTGTTACTCTGTCA 100 30
MTP40_RS06490 1364719 .. 1364743 -  -4.1  -3.35679   CTCCTTCAGCCAGAA          CGTGGGCCTGG TTT CCATGACCAAG          GTCGTCAACCGCGGT  49 459
MTP40_RS06440 1353284 .. 1353297 -  -8.1  -2.87132   TTCCTGCCGCAGACA               GCAGG ATTC CCTGC                GGCAATGTCAGCGCT  59 33
MTP40_RS06435 1351983 .. 1352016 - -16.7   -5.1244   GTAGGAATACAAAAA     CCGGCCCCGCCTCCC ATGC AGGAGACAGAGCCGG      TTTTGCGATTCTATT 100 51
        proC NONE
        proB NONE
MTP40_RS06405 1344599 .. 1344630 - -14.5  -5.45802   CCTGCAAAACAAAAA      TACAGGCCGCTGT CCTTCC ACGGCGGCCTGTA       AGAAAAAAACGGAAA 100 63
MTP40_RS06400 1343748 .. 1343789 - -12.9  -4.90296   AAAACCGCATAAAAA TGCAGCGCCGCTGAAGCCC TGAA AAGCTTCGGCGGCGCTGTT  TTACGTTTCCCTCTA 100 65
MTP40_RS06385 1339004 .. 1339034 -   -14  -3.93004   ATAAGATGCTATAAA       GAAATCCCCTCGTC ATA GGCGGGGGGATTTC       TCTGTTAAGCGGGTA 100 30
MTP40_RS06360 1332247 .. 1332272 - -13.3  -5.25772   AAAGGATAAGAAAAA         TACCGGGGCAG GCGG CTGCTCCGGTA          TTTTTTGTGGCACAT 100 40
MTP40_RS06295 1319171 .. 1319190 -  -6.4  -5.00616   TTTGGCCGTAAAAAA            CTCCCACA AGAC TGTGGGAT             GTTTTTTACACTTCA  83 31
MTP40_RS06290 1318255 .. 1318302 - -17.8  -3.60151   CTGTCTAAATCATAA TACCAGAAGGGGCTGCTGCACC GTTT GATGCAGCAGCCCCTTCTTTTT GTTATTGTTTTTTGT 100 54
        rpmB 1310409 .. 1310434 - -13.3  -5.64304   GAAGATAACAAAAAA         GCCGGCCACTC GACA AAGTGACCGGC          AGATGCAGCTACTTA 100 38
MTP40_RS06235 NONE
MTP40_RS06230 NONE
MTP40_RS06225 1308535 .. 1308564 - -15.7  -5.26907   GAAGATAAAACAAAA       GGCTCTGCGCCCC AAAC GGGGAACAGAGCC        TTTGAAGCATCCAAA 100 45
MTP40_RS06220 NONE
MTP40_RS06215 1305358 .. 1305402 - -20.8  -4.94222   AAGAATCCAGAAAAA GCAGCAGCGCCCTGTCTCCC GCAAT GGGAAACAGGGCGCTGCTTT TTGCGCATCCGTTAT 100 37
MTP40_RS06185 1300176 .. 1300198 -   -15  -5.74288   ACAAAGAACAAAAAA           GACATCCGAA CAG TTCGGATGTC           TTTTGGTTGGGGATG 100 28
MTP40_RS06105 1274343 .. 1274380 - -14.2  -3.99553   AAGAACATACAACAA   CAGCCGCCCAGCGA CCTTGCGGTC TCGCTGGGCGGCTT    ATTTTTTGCGTTTCC 100 24
MTP40_RS06100 1272987 .. 1273028 - -13.2  -4.96501   TGGTATAAAAAGAAA TCCCACGATTTACAAGTA CTTGCC TGCCTGCAAATCGTGGGA  TTTTGTTTTAATGTG 100 87
MTP40_RS06030 1253251 .. 1253289 -  -6.9  -5.50313   GATAAAAGCAAAAAA  GATTGACCGCCCCCAGTCT CAC AAACTCGG--CGGTCAATC  TTTTTGACTTAAAAG  93 151
MTP40_RS06010 1249457 .. 1249493 - -18.9  -2.87957   TAATGAGTATAACGA    GAACCCCCTCCGGTA TGGTGTG TACCGAAGGGGGTTC    GTTGGGGTTGGATGG 100 467
MTP40_RS14435 1247280 .. 1247325 -   -14  -4.64861   TGCTCTTAAAACAAA CCAAGGACGGCCGCCCGGGGC TTCCT GCCCCGAACG-CCGTCCTTTT TATTATAGCATTGAA 100 208
MTP40_RS06000 NONE
MTP40_RS05915 1225622 .. 1225652 - -13.9  -5.34381   AAATGCAAACAAAAA       TCCCCCGCAGGCG GCTGG CGCTGGCGGGGGA       CAGGTGCATGATTTA 100 38
MTP40_RS05910 NONE
MTP40_RS05905 NONE
MTP40_RS05900 1224602 .. 1224616 -  -2.8  -2.96546   TACAATAGAGGAAAT               CGGAAA ATG TTTCAG               TGAAGCCAAAATAAA  43 61
        gdhA 1223104 .. 1223133 - -13.5  -5.86965   ATGCAGGAAAAAAAA       GGGGGCCGCACCC CTTC GGATGCAGCCCTC        TGAAAAGGAATGCTT 100 39
         hcp 1221396 .. 1221415 -   -15  -5.24796   TCGACACAAGAAAAA            CTCCCGGG AAAT CCCGGGAG             TATAGCAGAAACGAA 100 65
MTP40_RS05885 1218277 .. 1218318 - -18.1  -5.08011   AAAACCTTGAAAAAA CCGCCGCATCCGGCTGCC GGTCTGG GGCAGG-GGATGCGGCGG TTTGCGTATGATTGC 100 56
        gltB NONE
MTP40_RS05875 1211893 .. 1211944 - -18.3   -4.6971   GAAACCCCAAGAAAA TAACGCAGAAAGCCCCATCGGTAC GAAAA ATACCGATGGGGCTTTCCGC-TTG TTTAGGATAGGAAAG 100 72
MTP40_RS05865 1209246 .. 1209257 -  -5.8  -3.99236   TGGACAAAAAAGCAA                CGGA TGCG TCCG                 GCTTTCCTGCCGGGG  66 317
MTP40_RS05835 1203666 .. 1203722 - -19.7  -2.75101   ACCAGAAATAAAACG CGAAAGCCCGCTG-CTTTCC-GCACTG GAAAA CAGTGCAGGGAAGGCAGCGGGCTTTCT TATGCGGTGTTACTT 100 35
MTP40_RS05775 1193368 .. 1193382 -  -5.6  -3.53811   CGGAGGCTGCCGAAA               GCGCAG CTG CTGCCC               CCGTGCAGCCGGTTT  55 443
MTP40_RS05765 1192250 .. 1192262 - -10.5  -4.37092   ATCTGCCCGATAAAA                CCGCC CAT GGCGG                CGCATGGAGCGGTCA  90 38
MTP40_RS05750 1188544 .. 1188567 - -13.2  -5.64873   CTGAATAAGAAAAAA          CGGATGGCTC CGCA GAACCATCCG           CTAAAACTGGTATCA 100 166
MTP40_RS05745 1187468 .. 1187495 -  -6.1  -3.57144   CCTTGTAGTTGTAAA        GGCTGCCCTGC TACGGT GCCGGACGGCC         TTTTTTCGTATTTCA  59 38
MTP40_RS05740 1185929 .. 1185947 -  -8.8  -2.75577   GGATGCGAAAAGTGA             GCTTTCCC CAT GGGACAGC             CGTTTGCAAGTGTCC  58 387
MTP40_RS05715 1182329 .. 1182355 - -13.8  -5.10208   GAAGGCGAATAAAAA         GGGTCCATCC CGCAGTT GGATGGACCC         TTTTGTGTTATATTT 100 70
MTP40_RS05665 1176084 .. 1176111 -  -9.8  -4.58563   GAATGACAAAAAGAA        CCCCGGCGTGCCT TGA AAGCT-GCCGGGG        TCTTTTGCGTGCAGG  91 66
MTP40_RS05660 NONE
MTP40_RS05655 NONE
MTP40_RS05650 NONE
MTP40_RS05645 1169960 .. 1170004 - -10.7  -4.49937   GGAAGAACAGCAAAA CACCCGCCTGCGTATTGTG TGCAAAG CACAGTACATGGGCGGGTG TGGTTTTGTTGTGGT 100 53
MTP40_RS05595 1161485 .. 1161512 -  -7.8  -2.61796   GAAAAGTACAGGAAT        CAACTTGCGTAA ATTT TTACGCAGATTG         GCCTCTCTTTTTTCA  58 98
MTP40_RS05590 1160527 .. 1160550 -  -3.6  -4.31433   CACCGGGAGAATAAA          GGGTGCCGCC TGCG GGCGGCGTAC           ATATCCTCTTTTAGC  63 64
MTP40_RS05580 1159427 .. 1159466 - -11.4  -4.00124   GATTCCATAACGAAA  GCCCGTCTGCGCTGCCACA TAT CGTGGCTT-GCAGACGAGC  TTTTTCGTTTGGCCG  91 59
MTP40_RS05550 1154873 .. 1154898 - -13.3  -4.82667   CTATGATATGAAAAA         TGCACCCGTTC ATTT GAGCGGGTGCA          TCTGTGTAACTACGG 100 35
MTP40_RS05545 NONE
MTP40_RS05540 NONE
MTP40_RS05535 1152618 .. 1152647 - -12.3  -3.88498   CCTCCAGATAGTAAA       GAAGGACACTCTC ACAA AAGAATGTCCTTC        TTTGTAAAAAAGATG  91 69
MTP40_RS05530 1152073 .. 1152114 -  -8.9  -5.06414   TCTGCCTAACAAAAA GATAAGCCGATTGGAAA TGTTGCTG TTTCCAATCGGCTTTTT  CATGCGTGTTTTATG 100 191
MTP40_RS05520 NONE
MTP40_RS05515 NONE
MTP40_RS05510 1148918 .. 1148967 - -18.1  -4.33739   GAAAAAATCGTAAAA CAGAGGCCTCCGAATCTTTTCCT AATA AGAAAGAGATTCGGAGGCCTTTA TTGGTTGATTTAGCT 100 49
MTP40_RS05435 1133380 .. 1133396 -  -3.7  -3.62354   TGCTGAAAGCAAAGA              CAATTGC CGA GGAATTG              GGCCTTGTGGAAAAC  51 219
MTP40_RS05375 NONE
MTP40_RS05370 1125758 .. 1125810 -   -12  -5.25735   GTAAAAAAGGAAAAA CATCTGCTGTCCC-ACACCGGAGGC TGTC ACGTCCGGCAAAGGGGCAGCAGATG TTTTTTTGTGTGTAA 100 94
MTP40_RS05345 1119817 .. 1119828 -  -7.2  -4.56597   TCGTTTGTTGAAAAA                CGGC AGCT GCCG                 TTTTATACAGAATAC  80 88
MTP40_RS05340 NONE
MTP40_RS05335 1118063 .. 1118079 - -10.1  -2.87468   GCTGATTATACCACA              CTGCGCC GGT GGCGCAA              CCCTTAAAAGAGATC  71 29
MTP40_RS05330 1117410 .. 1117457 - -15.6  -4.70613   AAAACTGGAATAAAA CACAAGCCCCCGCATGTTGGCC GGAA AACCAACGTGCGGGGGCTTTTT TGCATCCCTGTGATG 100 42
MTP40_RS05280 1105313 .. 1105339 - -10.7  -5.40072   CCTTTCTCAAAAAAA         GCCCCGGTTCC GTAAT GGCTCCGGGGC         AGAGATATATTTATG 100 210
MTP40_RS05275 NONE
MTP40_RS05270 NONE
MTP40_RS05265 NONE
MTP40_RS05260 1101381 .. 1101406 - -15.5  -5.74122   TACCATACAAAAAAA         CTCCACGCAAC CTAC GCTGCGTGGAG          TTCGTGCTTTCAGGA 100 42
MTP40_RS05250 1099972 .. 1099990 - -14.6  -2.74322   GGCAATCTGTGAAAG             CCTCCCTC ATT GAGGGAGG             TGGCATCGCGTGAGC  90 73
        dapF 1093146 .. 1093200 -  -2.2  -2.64155   GCTCTCCCAAAGGGA GAGCCGA-TGCAGCGTCTAC-GCCAGC AGAA GCTGACCGTTGA-GCCGCAATTGCCTC TCCCTTTGGGAGAGG  39 77
MTP40_RS05210 1091841 .. 1091870 - -14.4  -5.67711   GAAATAAAAGAAAAA       GGCGATGCAGCT GTTCAA AACTGCATCGCC        TTTTTGCTTGTGTAA 100 43
MTP40_RS05165 1081114 .. 1081146 - -15.7  -5.28176   GTCAGGGAGAAAAAA      TAGAACCGGACGCTT CAA AAACGTCCGGTTCTG      CTTTTTGCTATGGGT 100 49
        aroF 1051918 .. 1051956 - -16.1  -5.20781   GATGACAAAAGAAAA  CAACCCCCTCAGTCACGC GGCA GCGTG-CCGAGAGGGTCG   TTCCATTCTCAGTTC 100 34
MTP40_RS05045 NONE
MTP40_RS05040 1049998 .. 1050011 -  -4.5  -4.64766   GGCAGAGCCGAAAAA               GCAGA TCCC CCTGC                GCCTGAATGCGAAGC  72 343
MTP40_RS05025 1048524 .. 1048547 - -12.4  -4.63218   CTGTGCGTAATAAAA          CCTCCCGCTC ATTC GAGTGGGAGG           TTTTGTGTTATAACA 100 59
MTP40_RS04985 1039687 .. 1039701 -  -2.8  -2.68282   AGTAATTAGCAGAAG               TGGC CCGATTT GCCA               AGGGCTCCCACTTTG  41 58
MTP40_RS04980 1038795 .. 1038807 -  -3.3  -3.56568   CAAGCAGGTGCTAAA                GGCTG GGG CAGTC                TTGGCTCCCCCTTTG  50 86
        sigG 1037829 .. 1037868 - -10.6  -5.20783   ACGCAAATACAAAAA  GTAGGAGAGCGGTGCAGG GAGG CCTGTGCCGCTCTCCTGT   TTATTTGTGCCGGAA 100 26
        thiT 1036663 .. 1036691 - -17.4  -5.64873   TGCAATAACAAAAAA        GCCCTGCCGGGC ACAGA GCCGGGCAGGGC        GCGGAACAAAGTGAG 100 47
MTP40_RS04960 1036454 .. 1036491 - -11.5   -5.4505   TGTCGGAACAAAAAA   GAAAAGCACCATACTTC CTAC GAAGTACAGTGCTTTTT    TGGTGGAGAATAGCG 100 26
MTP40_RS04890 NONE
MTP40_RS04885 1024982 .. 1025007 - -15.5  -4.80853   AGGGCAAAAAAATAA         GAGGTGTGCCC AACT GGACACACCTC          GGTGAGATACATCTA 100 84
MTP40_RS04745  996655 ..  996681 - -19.5  -5.01845   GAGAACAAGTAAAAA         GGGACGGCGTG GAGCA CACGCCGTCCC         TTTTGTGGTGTCAGG 100 148
MTP40_RS04710  987643 ..  987686 - -15.4  -3.47941   GATGAACTAGCATAA GAAAAGCGGCATCTTTCCGT TTGC ACGGAGAGGTGCCGCTTTTT GCTGCATATCAAGAA 100 42
MTP40_RS04700  986227 ..  986248 - -15.9  -5.09762   ACGTCAACAGAAAAA           CCCCGGAAC ATTC GTTCCGGGG            TTTCTGGCGGAAAGA 100 30
MTP40_RS04695  985511 ..  985528 -  -2.7  -2.59431   TTTTTTTATAATTTA             TTTGCAG GCCG CCACAAA              GGCATCAAAGATCCC  41 5
MTP40_RS04690  984513 ..  984542 - -15.1  -3.76232   CGCTGAAATAGATAA       GAGCCGTGCAG TTCAAACG CTGCACGGCTC        TGCTTTTTATGTTAC 100 37
MTP40_RS04655  976936 ..  976977 - -18.9  -5.95539   TTGCAAATAAAAAAA TACGGCAGCCTTCATCCCA TTGC TAGGACGAATGCTGCCGTA  TCCGTGGTGCCACCT 100 280
MTP40_RS04545  952662 ..  952688 -  -3.7  -2.62396   TACGGCCGCATATCA         GAGGAACAGGA GTAAT TCTTGTTCTTC         TGAAAGGTGGTGCCT  42 33
MTP40_RS04540  952539 ..  952591 -  -2.6  -2.60244   GCTCTAACCAACTGA GCTACCGGGCCATATCCGGAGTGAT TATT ACCACTCCGT-TATGGAGCGGCCGA CGAGGCTCGAACTCG  41 14
MTP40_RS04535  952476 ..  952493 -  -7.7  -3.44487   CACCACAGGGAAAGA             CGA-CCCG GAT CGGGCTCG             AACCGACGACCCCCA  66 7
MTP40_RS04530  952338 ..  952363 -  -2.5  -2.79796   GGCCACGTCACCATA         TTTGGAGTGAA TATT TCCACTCCATT          TGGAGCGGCCGACGA  40 26
MTP40_RS04525  952224 ..  952261 - -17.9  -4.83677   AAAAGAAAAGCAAAA   CAAAAAATCCCGGAAGC CGCA GCTTCCGGGAACTTTTG    GAGGTGACGACCAGA 100 24
MTP40_RS04520  951116 ..  951141 -  -2.6  -3.01831   TCCGCAAAAATAGTA         TCCCCATT GTAACACGGG AACGGGGA          AAAATCTGCCTTACA  43 36
        recG  948955 ..  948990 -   -25  -2.76721   ACAGAATCGTAATCA    TGAGAAAGGCTCCTGC TTTC GCAGGAGCCTTTCTCA     TTTAAAATATATGGA 100 61
        glgB  944206 ..  944235 - -14.4  -4.66537   CCCCGGAAGATAAAA       TATCCCGCCTGC ATTTCA GCAGACGGGATA        TTTTGAATGTGATAT 100 40
MTP40_RS04490 NONE
         tig  941176 ..  941190 -  -2.8  -3.55444   GGCGTAGCGCGTAAA               GATACT CAT AGGATC               ACTCCTTTTCAGGGT  49 24
MTP40_RS04480  939739 ..  939764 - -13.4  -5.26875   GCGGGAAGCAAAAAA         GCGTAACGGA AACACA TCCGTTACGC          CTTTGTAACTTGTCC 100 186
MTP40_RS04475  937538 ..  937590 - -14.1  -4.74706   CTGAACATGCAAAAA GAACACCCCCTCTGCGGCGCAGCTT CAG AAACTGCCGTGCAGAGGGGGTGTAT TTTGTGTTATGAGCA 100 51
MTP40_RS04460 NONE
        atpE NONE
        atpF NONE
        atpA NONE
        atpG NONE
        atpD NONE
        atpC  929566 ..  929597 - -14.5   -5.4593   GTAAAACAACAAAAA      CACCGTCAGCCCG TTGTGT CAGACTGACGGTG       TTCTGTTTGAGGGGA 100 45
        pepT  928168 ..  928197 - -22.3  -5.55769   TGGGATAAGAAAAAA       TGGACGGCTCTCG AAAA CGAGAGCCGTCCA        TTTTTTATGTGCGGT 100 68
MTP40_RS04415  926262 ..  926300 - -11.9   -5.0925   GTTCAAAATGAAAAA   TGCGAAGATCGTCTTTC ACATG GAAAAATGACCTTCGCA   TTTCTTAAAAGGATG 100 38
MTP40_RS04410 NONE
MTP40_RS04405 NONE
MTP40_RS04400 NONE
MTP40_RS04395 NONE
MTP40_RS04390  922786 ..  922807 -  -8.7  -5.01732   AATTTTTGCAAAAAA           GAAAGACCC GGTC GGGTCTTAC            GTTCAAAAGGTGTAT  93 40
MTP40_RS04385  922297 ..  922309 -  -3.4  -2.54896   CTCTCAGTCAATGCA                GATG CAGAC CATC                TTCTCGCAGCCAGCC  42 1
MTP40_RS04380  922030 ..  922044 -  -5.7   -3.8062   GAACTGTGAGAAGAA               TCCTC TCAGG GAGGA               CGGGGAGCGCAAGAC  64 16
MTP40_RS04375 NONE
MTP40_RS04370 NONE
MTP40_RS04365 NONE
MTP40_RS04360  919917 ..  919939 -  -8.5  -2.52676   TAGCCTTTTAATGTA           GCTCGATTC GGTTT GAATCAAGC           TGTATTAAAATTCTG  60 47
MTP40_RS04355  919212 ..  919253 -   -16  -3.61983   CTAAGTGATACAGAA TTAGCCCCACACCAGCGT TCATTC ATGCTGATGCGGGGCTAA  CATGTGTTTAGCAAT 100 33
MTP40_RS04335 NONE
MTP40_RS04330  913423 ..  913451 - -13.2  -4.82901   CTTTGCGTAGAAAAA        GCGGCTTGCCCT GATAT AAGGCAAACCGC        TTCCTCAAAATTTAT 100 57
MTP40_RS04325 NONE
MTP40_RS04320  911423 ..  911443 - -14.1   -2.6006   AACGGAGTTGAGAAC            TGCCGTACA TCG TGTACGGCA            TGTACGGCAGTTTTG  88 58
MTP40_RS04315 NONE
MTP40_RS04310  909751 ..  909787 - -18.2   -4.8048   TCGTGATAGTAAAAA    GCAGGGAACTGGTATC ACACA GATACCAACTCCCTGC    AGAACTGATGGTAAA 100 130
MTP40_RS04305  909461 ..  909496 - -13.2  -5.24129   CTTCGGGATAAAAAA    GGAAGGGACGCCCCGG TTGC CCGGAACGCCCCTCGC     AGATTAGTGTAGCTT 100 29
MTP40_RS04300 NONE
MTP40_RS04295  907294 ..  907316 - -14.2  -2.76249   TAAATATTGCAAGCA           CCGGTATGGA AAA CCCATACCGG           TGCTTATTTTACGCT  88 110
MTP40_RS04280 NONE
MTP40_RS04275 NONE
MTP40_RS04270  903745 ..  903765 -  -8.2  -4.67011   AATGTCACTTAAAAA            GGGGCTGC ATTAA GCAGTCCC            CCGATAAAAGCAGAT  88 14
MTP40_RS04265 NONE
MTP40_RS04260 NONE
MTP40_RS04255  899999 ..  900041 -  -3.3  -2.63623   GCGTTCAAAATATAT GCAGAGCCGTTAGTCCGCA AAGGA TGCGAATTATCGGCTCAAT GGTTTTCTTTTATTT  42 48
MTP40_RS04250 NONE
MTP40_RS04245 NONE
MTP40_RS04240 NONE
MTP40_RS04235 NONE
MTP40_RS04230  894808 ..  894836 -  -2.4  -3.34398   TGGTCTTTTCAAAGA        TTGCCATAATGG TTCCT CCGTTCTGACAA        TTAAAAATCGGTCCC  45 177
MTP40_RS04225 NONE
MTP40_RS04220 NONE
MTP40_RS04215  893295 ..  893309 -  -2.1  -2.64912   CTTTCAACGTAGAAT               CACTC ATATG GAATG               TCCTTTCCCGGCATT  39 39
MTP40_RS04210  892365 ..  892389 -  -6.5  -3.55563   AGCGGACTCTTCAAA          CTTACAGTTCA GTT TCAACTGCAAG          CTGCTCCTGCTTCTC  61 2
MTP40_RS04205 NONE
MTP40_RS04200  891680 ..  891710 - -12.6  -4.85599   TTCAGGGTATAAAAA       TAGCGGGCAACC TTTTTGG GGTTGCCCGCTG       GAAAGTGTATCGAGA 100 46
MTP40_RS04190  890440 ..  890465 - -14.7  -5.18371   TGCGACAAAACAAAA         GCGGAGGGCGA TTTT TCGCTCTCCGC          TCGGTCGATATGTTC 100 82
MTP40_RS04180 NONE
MTP40_RS04175 NONE
MTP40_RS04170 NONE
MTP40_RS04165  887419 ..  887436 - -12.7  -5.64421   ATTGCAAAGAAAAAA             TGCCGCC CGGA GGCGGCA              TTGAGATCATTTGGA 100 32
MTP40_RS04160  885957 ..  886000 - -22.6   -5.4387   ATATAAACTAAAAAA GCCGCCGAGGACATCTCCCCA AAA TGGGAAGA-GTCCTCGGCGGT ATTCGTTTATTGGGT 100 32
MTP40_RS04150  885154 ..  885179 -  -7.5  -4.85782   GTGGGCAAAAAGAAA         GAGCGTCAGCA CGTT TGCTGGCGTTC          TTTGACATAGGTGTT  85 39
MTP40_RS04145  884397 ..  884433 -  -5.9  -2.77104   GCACAACCATATAAC    CGTCCTTGATGAAACTA TTT TTGTTTCATCGATGACA    TTGTACCAGCAAGCA  52 160
MTP40_RS04140  882692 ..  882733 - -20.1   -4.5002   AAAACATATAATAAA TAAGCAGCGCCCGCCGGGA GATC TTCCGGCGGGCGCTGCTGT  GTTTAGAGGAACGTT 100 53
        ribD NONE
MTP40_RS04110  878497 ..  878509 -  -6.9   -4.0896   AAACTCTCCTTAAAA                GCCGC AGC GCAGC                AGCATTTCTTTTGTG  68 7
MTP40_RS04105  877296 ..  877306 -  -5.4   -3.3676   GTTAATATTCCAGAA                 GATG TCC CATC                 CGTGCCTGCTTTGTT  54 1
        ribE NONE
MTP40_RS04095  876342 ..  876356 -  -2.7  -2.85366   ACAAACAAATAAGAT               CCTGG TCATG CCGGG               TCGTTCTCCTTTTGG  42 16
MTP40_RS04090  875846 ..  875881 - -12.6  -5.95539   TTTGAAATAAAAAAA    TAGACGGATGTCTGTC AACT GGCAGACATCCGTCCG     TTTTTATGATAATCT 100 42
MTP40_RS04055  871687 ..  871733 - -19.8  -4.96848   TTTGGCATACAAAAA CACCCCATTTCCTAAACAGTAT ACC ATACTGTCTAACAAATGGGGTG CAGTTCAGTACTCTG 100 149
MTP40_RS04050 NONE
MTP40_RS04045  870330 ..  870347 -    -7  -3.75629   TATCTGCAAGGCAAA             CTGCCA GAGTGA TGGCAG              ATAAGAAACCCATGT  67 156
MTP40_RS03955  853350 ..  853378 - -16.2  -4.29106   TTCTATATGAAGAAA        GTTGCTGGAGAA AAAAA TTCTCCAGCAAC        TTTGTCTTTGATGAA 100 58
MTP40_RS03950  852906 ..  852920 -  -5.6  -2.78384   TTTTCCCCTATTATA               CGCCTA CTT TGGGCG               GGAGACAAACTATTT  49 75
MTP40_RS03945  852192 ..  852227 -  -8.2   -5.5112   GGCAGCAATAAAAAA    GACCCCCGCAGCGT ATGATTTG ACGCCGCGGGGTTT     CTCAATTGTTCGGTT 100 27
MTP40_RS03940  851948 ..  851988 - -14.4  -4.70583   GTGAGCAAGACAAAA GCACTTTCCC-T-TATTTGC AAT GCAAATATAAGGGAAAGTGC TTTTTTGTAAGGGCA 100 52
        treR  847543 ..  847587 - -14.4  -3.39288   TATTTTTGAATAACA CAAGAAACGCTCTTGTCGGT GTAAA ACTGGCAGGAGCGTTTCTTG TTGAAGTGATTATAA  93 248
MTP40_RS03910  844499 ..  844538 - -16.6  -5.24129   CTGTGTCACAAAAAA GCTCCCGTCCT-G-CCGG AATGCA CCGGACAAGGACGGGAGC  TGAACTTCCGTGGTA 100 219
        metG NONE
MTP40_RS03900 NONE
MTP40_RS03895 NONE
MTP40_RS03890  840250 ..  840289 - -25.2  -4.87892   CTGGAATAAAACAAA  GAGCAGAGCGCTCCAGCC AGCT GGCTGGAACACTCTGCTC   TTTTTAATGCAATAT 100 57
MTP40_RS03855  832529 ..  832562 - -11.1  -5.36441   TTTTGAGATAAAAAA     GAACGATGCTAAGTC TTTC GACTCGACATCGTTC      TTTTCGTTGATGTTT 100 129
MTP40_RS03850  832211 ..  832237 - -14.5  -4.15543   TAAACATTTTGAAAA         CACGCCCCAAG TTGAC CTTGGAGCGTG         TGAACATCAATCAAG 100 32
MTP40_RS03845 NONE
        mobC  830629 ..  830652 -    -3  -4.08945   ACGATTTTTTCAAAA          TCGGCTACGC TCCT ACGGAGCTGA           ACATCACTTTATTTT  56 29
MTP40_RS03835 NONE
MTP40_RS03830 NONE
MTP40_RS03825  827997 ..  828018 - -10.9   -3.2812   TATGCATCAGAAAAG           CCACCG-GCA AAA TGCTCGGTGG           TCGTAAAACAGTAAT  78 73
        dusB  825610 ..  825625 -    -9  -2.77043   TTCAGTATCGGAAAT              TTCCCG CTTA CGGGAA               CGGCACCTCGCGGGT  65 17
MTP40_RS03810 NONE
MTP40_RS03805  822484 ..  822532 - -10.9  -3.40175   ATTGCGCAAAACACA GCCGCCC-TCCAGCCGGGCC GTGTAAAAGA GGGCCTGCGGGAAGGGCGGC GGATCTTGTTGGTGT  73 460
MTP40_RS03790 NONE
        speE NONE
        speB NONE
MTP40_RS03775 NONE
MTP40_RS03770  815047 ..  815092 - -21.3  -3.28712   TTCTCCGTTTTATAA GCAAACACCCCTCTGCATTCC GAAA GGAGCGCAGAGGGGTGTTTGT GTATCCGGGCGGCTC 100 39
MTP40_RS03735 NONE
MTP40_RS03730  806583 ..  806629 -   -18  -5.10208   TAACCGGAACAAAAA TAACAGCGCATCCTTCGGGCAG AGC CTGCCTGCGGGATGCGCTGTTT TGCGTGGAGGGGGCT 100 395
        mtaB  797220 ..  797236 -  -2.2  -4.03253   CAGAAACAGAAAACA              TCCCGT CCCAC ACTGGA              CTGCGGCAGACGGAA  55 206
MTP40_RS03675  795535 ..  795563 - -15.4   -5.4588   TAAAAGTAGAAAAAA        TATCCGCTCCCC TGTGC GGGAAGCGGATA        TTGTAAAACCTCTCA 100 96
MTP40_RS03670  794855 ..  794876 - -15.9  -5.65496   GAGGAAAAACAAAAA           GGCAGAGCC CGCG GGCTCTGCC            TTTTTGCTTGCCATT 100 40
MTP40_RS03660 NONE
MTP40_RS03655 NONE
MTP40_RS03650  792199 ..  792220 - -10.2  -5.63517   CCTGCAAACAAAAAA           GAACTGCC GCGGCG GGCAGTTC            TCAGAAAAAACTCAG 100 37
MTP40_RS03645  791375 ..  791405 -   -17  -4.96501   TCGGATAAAAACAAA       GACCTCCTCTGG AAAACGG CCAGAGGAGGTC       TTTCTATATTATGGG 100 102
MTP40_RS03600  780379 ..  780409 - -16.2  -4.46212   GTTTGTATGACAAAA       CCGCCCTTCCAG TTTGATG CCGGAAGGGCGG       TTTTTCTATGTGAGT 100 48
MTP40_RS03585  776998 ..  777025 - -17.1  -5.25772   AAAGCACAACAAAAA        GGACCGTCTCC TCAGCG GGAGACGGTCC         TTTTTTATGCCGTTC 100 39
        ruvX  745048 ..  745080 -   -13  -4.07124   CATTACCCATATAAA     CGAAAAAGAGACGCT GAAA AGCGTCTCTTTTT-G      CTTCCGGTTCAAATT 100 34
MTP40_RS03440  742858 ..  742868 -    -4  -2.71712   GCTTTTCTCTCAAAG                 TGTA CGA TACA                 GTTTACAGCATTGCG  44 28
MTP40_RS03435 NONE
MTP40_RS03430  740896 ..  740941 - -17.8  -5.00339   AGTAACAACTAAAAA TGACAAAACCGGCTTTCCTG TGGCAG CAGGAAAGCCGGTTTTGTGC TGAATGGAGAGAATG 100 54
MTP40_RS03420 NONE
        ssrS  739265 ..  739299 -   -13  -5.60993   CGTCCTATAAAAAAA    TCCACACACTGGCCT TGTGGC AGGCCAGCG-GTGGA     TGCAATGCTATAAAA 100 39
MTP40_RS03410  738472 ..  738502 - -18.4  -4.99435   CGGAAGAATGAAAAA       CGGCTGCTGCAC GGAAAAT GTGCAGCAGCCG       TTTTTGTGGATCATT 100 40
MTP40_RS03385 NONE
MTP40_RS03380  733388 ..  733428 - -11.2  -5.31275   TGGCAGCATAAAAAA  CAGGCCCCTTTTCTGG AAATGATAA CCAGAGAATGGGCCTG  TTTGACACATTTTAT 100 129
MTP40_RS03375 NONE
MTP40_RS03370  732032 ..  732052 - -12.6  -3.18264   CGCGGGAGGCACGAA            CTAGGGGC TGCTC GCCCCTAG            TAACCCCAAAGCAGA  84 127
MTP40_RS03365 NONE
MTP40_RS03360  728267 ..  728285 -   -16  -2.75294   GTAAACTCGCCAAAG             GCTCCCCC TTT GGGGGAGC             TGGCATCGCGACAGC 100 65
MTP40_RS03355  727684 ..  727712 -  -6.7  -2.53382   AGGAGCCGCAAGCGA        TCTTCACAGAACG GCA CGTTCTGCCAAGG        GCTTCCCTGCCGGGG  52 71
MTP40_RS03350 NONE
MTP40_RS03345  726714 ..  726740 -   -16  -5.19328   ACTGTATAACAAAAA         GACGATGCACAA ACG CTGTGCATCGTC         TTTTTGCGTCTTAGG 100 45
MTP40_RS03320  719829 ..  719844 - -10.4   -3.2703   AAACAAGCAATTCAA              GACCGC TTCG GCGGTC               TTTTTTGCTGCCCGT  75 43
MTP40_RS03310 NONE
MTP40_RS03305  717205 ..  717248 - -19.1  -5.73978   AGGACAAACAAAAAA CGAGTGGCACTCATGCA ACCGGTCTTA CGCATGAGTGCCACTCG TTGTACGGAATCATT 100 312
MTP40_RS03295  714309 ..  714347 - -21.9  -4.00526   AACGGCATAACGAAA  CAGCCGGGAGGCGTTCCA AAAG CGGAA-GCCTCCCGGCTG   CGTTTTTATAAGTTG 100 55
MTP40_RS03270  708456 ..  708498 - -16.6   -5.3472   AAAAAATAAACAAAA TGAGGCCGTTCCGCTTCTCT GAGAA AGAGA-G-GGAACGGCCTCA TTGTTTTGATCAGAC 100 35
MTP40_RS03260  705000 ..  705046 - -14.7  -5.57054   AACAATGCAAAAAAA TCCGACCCGATTC-TACGATGC CATA GCATTGTATGAATCAGATCGGA GAATGAAAAGTGTTT 100 181
MTP40_RS03215  695626 ..  695642 - -10.1  -2.75713   AATATAGACATACCA              CAGCAGC ATT GCTGCCG              CACATACACCTATGA  71 158
        kdpA NONE
        kdpB NONE
MTP40_RS03200 NONE
        kdpC NONE
MTP40_RS03190  690382 ..  690395 -  -3.1  -3.29252   TCCTATCAAAGAAAT               CTTCC GACC GGAAA                TCATTGCAAAGGATG  47 126
MTP40_RS03185 NONE
MTP40_RS03180  686511 ..  686551 - -12.6    -3.885   ATCGCCACACAACAA CCTGAACC-TGACCATCCC TTCC GGGATGGCCTTGGTTCGGG  TTCGTTATGTAGCGA  93 445
MTP40_RS03175  685562 ..  685584 - -11.4  -3.22894   GATAATACCCAGTAA           GATATGACGC ACA GCATCATATC           ACTGGGCAAGGCGTT  79 318
MTP40_RS03170  683874 ..  683885 -  -5.8  -3.05935   AGACCGTTCAGGTAA                TCCC GGAT GGGA                 TGATAACGGTTCTCG  53 377
MTP40_RS03160 NONE
MTP40_RS03155  680713 ..  680734 - -13.1  -3.16971   GCACCAGATATTGAA           CGCCAAATC GTAA GATTTGGCG            TTCTTTTTTGTTATG  76 157
MTP40_RS03140 NONE
MTP40_RS03135  675410 ..  675424 -  -3.5  -2.78679   CTCTCTCATTCAAAT               GCGCT TGCTC AGCAC               GTTCTGCTCGTATTT  43 5
        rhaD  674471 ..  674527 - -28.5  -4.32857   TCCGGGAAACATAAA GCAGAACAGGCATCCTG--CGATACCG TTTGG CGGTATCGGGCAGGATGCCTGTTCTGC TATGATGAAGAAAAA 100 55
MTP40_RS03110  670010 ..  670039 - -17.3  -5.27779   TGCAATAGCAAAAAA       CAGGCTGCG-GAAG ATG CTTCTCGCAGCCTG       TTTTGGTTCAGTGGG 100 33
MTP40_RS03100  666916 ..  666961 - -15.6  -3.61591   GAAAAATGGATAGAA TCAGCAAAAACCGAAAGAGC GTATGA GCCCTTTCGGTTTTTGCGGG GTGTTACTGCATGTG 100 29
MTP40_RS03095 NONE
MTP40_RS03090 NONE
MTP40_RS03085  661914 ..  661958 - -20.8  -4.38154   AGATTCCCCACAAAA CACAACGCCCCGCACCGG AAGGAGAAA CCGGTGCGGGGCGTTGCT TTTATGGGGGTAATG 100 70
MTP40_RS03075  656483 ..  656498 -  -3.2  -5.45802   TCCCTAAAAGAAAAA              TACCGC CCAC GCAGCA               TAGCGATGGATTTTG  81 329
        mobC NONE
MTP40_RS03065 NONE
MTP40_RS03060  653088 ..  653101 -  -3.7  -2.64794   TCCAATTTCATATCA               GGCGC AAGG GCGCG                GATAGTTTCCGCCCT  42 86
MTP40_RS03055  652575 ..  652592 - -11.3  -2.52464   TGTGCGGCGAATCTA             CATCGCC CACA GGCGATG              TAAGCAGGGATTCCA  72 82
MTP40_RS03050  651946 ..  651962 -  -6.7  -3.85698   TCCCGTGGCCACAAA              TTTTCAA TTC TTGAAAA              TTCTTGCCCTTTTGG  66 108
MTP40_RS03045  651343 ..  651354 -  -4.4  -3.14344   TATTCTGTGGAGCAA                CTGT CAGT ACAG                 GATTGGTTACCGGAT  48 68
MTP40_RS03040  649540 ..  649567 - -19.2   -5.4182   AAGCACAAACAAAAA        CAGGGTGCGCCC ACCC GGACGCACCCTG         CAAAAATCCACACAC 100 134
MTP40_RS03020 NONE
MTP40_RS03015 NONE
MTP40_RS03010 NONE
MTP40_RS03005  642695 ..  642749 -   -24  -3.42699   AGTCACGGATTAGAA GATTAAGCATAAAAGGGTATGCGGCT ATA AACCGCATACCCTTTTACACTTTATC GCTTCCAGACCGCTG 100 21
MTP40_RS02995  641520 ..  641532 -  -2.7  -3.33815   ACCGCTCCCAATCAA                CTGTA CGG TACAA                ATGATTGCTATCTCA  46 206
MTP40_RS02985  640695 ..  640733 - -19.8  -3.41988   GCGTAGTTAATAATA   GACAGCCATCTATTTGCA AGT CGCAAGTAGATGGCTGTC   GGTTTTATCTGTATA 100 43
MTP40_RS02945 NONE
MTP40_RS02940 NONE
MTP40_RS02935  633154 ..  633175 - -11.7  -3.16971   GCACCAGATATTGAA           CGTCAAATC GTAA GATTTGACG            TTCTTTTTTGTTATG  79 157
MTP40_RS02860 NONE
        hflX  616968 ..  616995 - -14.3  -2.87564   CCACCCCTCTATACA        CAAAAACCCGC TGCCAG GCGGGTTTTTG         TGTTTGTTGGGGATT  88 277
MTP40_RS02850  616152 ..  616166 -  -8.5  -3.17051   CTTGTATCAGGAATA               CGGCC CGGTC GGCCG               GAAGATTGCACGGCA  64 64
MTP40_RS02845  615441 ..  615471 - -16.3  -4.15703   TGGTAGAAATAAGAA       TGCCCTGTACCAT GCAAA ACGGTACAGGGCA       TTGTTGTTTTGAAAG 100 46
MTP40_RS02830  612672 ..  612694 - -12.7   -3.6422   TATGCCCCGAAAATA           CCGCAGCCG GAAGG CGACTGCGG           TTTTCTGGTTGGGGA  90 30
MTP40_RS02825  612563 ..  612584 -  -9.5  -5.93252   TGTAAAAAGAAAAAA           GAGACACAC CGAA GTATGTCTC            TTTTTCGATCGGAGC 100 32
MTP40_RS02820  611344 ..  611360 -  -2.2    -3.409   AAACCGGGAAGAAGA              TTGCGG TCATG CCGGAA              AGATTTCTCAGCCCA  45 33
MTP40_RS02815  610660 ..  610697 - -18.6  -5.18355   TCTAAAAAGCAAAAA   GTCCCATGCCC-GCACC GCCAA AGTGCTGGGCATGGGAC   TTTTTGCGTCTGGGA 100 153
MTP40_RS02765 NONE
MTP40_RS02760  594728 ..  594743 -    -6  -3.87815   TTTGACCCTTATAAA              GTCGCG CTGG CGCGGC               GGGTGACATGGCAGG  64 3
MTP40_RS02755  593939 ..  593968 - -17.3  -4.29845   GAATGCAATGCAAAA       GGAGCTGTACTCCC GCG GGG-GTACAGCTCC       TTTTCGTATGTACAG 100 70
MTP40_RS02745  591939 ..  591965 -   -16  -5.64274   CTACTGACAAAAAAA         TGAGACTGCCAA GGC CTGGCAGTCTCA         TTTTTTTGATGATTT 100 44
MTP40_RS02730  590544 ..  590571 - -13.4  -5.07652   CTGGCCAAAATAAAA        GCCCGCCACCTC CTGC GAGGCAGCGGAC         TTGTGTAAGCGCGGC 100 41
MTP40_RS02715  587812 ..  587850 -  -5.4   -4.4891   TCGACCACGAGAAAA  GCCACGA-TAAACCG TTTATAAGCG CGGTTTTGTCGTGGC   TTTGTTTCTGTCATT  73 40
MTP40_RS02700 NONE
MTP40_RS02695 NONE
        rhaD  581605 ..  581620 -  -4.6  -2.56514   AATTAAGAAAATCAG              TCGAGG AACT CCTCGT               TCAGGGTCACGCCAA  46 6
MTP40_RS02685  579704 ..  579734 - -14.1  -3.54717   AAAAACTATAATCAA       CGATGCCCTTTGT TACTG ACAAGGGGCATCG       CTTTGTTTTGTGCGC  93 380
MTP40_RS02670  573873 ..  573901 - -14.7  -3.67564   AATCACTCACTGAAA        GTGGTGGTTATCA CGG TGAGAACCACCAC        TTTTCATAGCAAGCC  95 323
MTP40_RS02665 NONE
MTP40_RS02660 NONE
MTP40_RS02655 NONE
MTP40_RS02650  569966 ..  569982 -  -9.4  -3.68302   GGAATATTTGAAGAA              CGTGGC GGGAA GCCACG              GATTAGAGGACTAAA  74 28
MTP40_RS02635 NONE
MTP40_RS02630  567433 ..  567460 - -17.1   -5.7946   CTCCTAACAAAAAAA        CTGCTGCACGG GCAGAG CCGTGCAGCAG         TTGGGAGGGATGCGG 100 41
MTP40_RS02625 NONE
MTP40_RS02620 NONE
MTP40_RS02615  563300 ..  563341 - -14.6  -4.27686   GAAAAGTATGCAAAA TGAAAGAAGCGCCTTACC TGACAG GGTAAGGCGCTTCTTTTC  TCATAAATAATGGGT 100 43
        cysE  542639 ..  542672 - -18.2  -4.84673   GTAAATAACAGAAAA     GCAGCTGCGTTCCG TGTGTG CGGAGCGCAGCTGC      TTTCGTTTTGCAGAA 100 126
        hemW  526199 ..  526228 - -19.3  -5.20216   GAGACCATGAAAAAA       GCCGCAGCGCTCC TGAA AGAGCGCCGCGGC        GAACGGGCTGTTCTG 100 230
MTP40_RS02425  523025 ..  523035 -  -5.4  -2.88822   CCTTTTATAGAATCA                 TCTG CCG CAGA                 GCTTCCGGCTCCAGC  49 4
MTP40_RS02420 NONE
MTP40_RS02415  521378 ..  521428 - -20.6  -4.72029   GGGAAGGGAACAAAA CAGAAAAAGGCGGGGCATCAGC TTACTGC ACTGATGCCCCGCCTTTTGCAG GTCAGATCATTTTTT 100 32
MTP40_RS02405  518396 ..  518429 - -22.6  -3.86194   AAGTTTTGGGAGAAA     CCTCTCAGTCGCGG CAGCGC CCGCGACTGAGAGG      TTTGATCACAGCTCC 100 31
        argF  517237 ..  517262 - -15.5   -5.4433   AGACAGAAACAAAAA         GCCCGATCGTT CGGA AACGACCGGGC          CTGTGCATATTGTGC 100 55
MTP40_RS02395  516459 ..  516485 -    -8  -2.64274   ACTGTTTCAAAGGGA         CGTTTCACCC CATATAC GGGTGAAGCG         CACGGATTATTGCAT  58 40
MTP40_RS02390 NONE
MTP40_RS02385  514711 ..  514722 -  -3.6  -3.32946   TGCTCAAGTATAATA                CCAC AGAG GCGG                 GTGGATGTCAAGGGT  48 55
MTP40_RS02380  514558 ..  514581 - -10.4  -5.18371   TTGGACAAAAGAAAA          GCATCCTGAA TCAC TTCAAGATGC           TTGGTGGTTGCGGGG 100 30
MTP40_RS02355  507512 ..  507541 - -15.8  -4.98616   TCAAAACAGCAAAAA       GCGCCGTGCAGT CATTTC ACTGCACAGCGC        TTTTTCTTATCCATA 100 59
MTP40_RS02325  501234 ..  501259 - -13.3  -5.60993   GCGCCCATAAAAAAA         CCGCCGACGTA TCTC TATGTCGGCGG          TTTTCTGTTTGCAGA 100 155
MTP40_RS02270 NONE
MTP40_RS02265  492157 ..  492188 -    -5  -5.71983   TTAAGGACAAAAAAA      TAAGAGGTGTGCCC AACT GGACACACCTCGGT       GAGATACATCTATGT 100 81
MTP40_RS02240 NONE
MTP40_RS02235  488343 ..  488383 -  -9.8  -5.07567   GGAGACCTGAAAAAA  CCAAAATGGGAGATGTCG GTACA CGGCATCTCCCATTTTTT  ATGCGATGGTTTCCA 100 24
        serC  480216 ..  480229 -  -2.3  -3.07198   CTCCTATACACAAAT               CAGGC ATTT GCCTT                GCGGAATTTCTCCAT  42 11
MTP40_RS02200  478978 ..  479010 - -12.1  -5.36441   GTTCCACATAAAAAA     TCCCCCCG-CCCAT GAACAG ATGGGGCGAGGGGA      AAGCTAAGGGTTGGC 100 45
MTP40_RS02190 NONE
MTP40_RS02185  475218 ..  475263 - -17.8  -2.87931   TGCAGTGCTGACATA GAAAACGTCCCCGTGCAG TTTTGATATC CTGCACGGGGACGTTTTG TGATCTTTTTATTTT 100 34
MTP40_RS02175  471899 ..  471928 - -13.6   -4.2131   ACCCAGGAAAAAATA       GGCCGGGAACAGG GTGTT CCTGC-CCCGGCC       GTTATTTTACTGGAT 100 66
MTP40_RS02170 NONE
MTP40_RS02165  469959 ..  469972 -  -2.4  -2.72881   CAGGCAAGGAAAGAT               CATG TGATTG CATG                GTGTGGTATCCTCCC  39 42
MTP40_RS02160  467208 ..  467243 - -17.8  -5.26316   TCAGCGCAGAAAAAA    CGAACGATGTC-ATCCG ATT CGGACAGACATCGTTCG    TTTCTTTTTACAGGT 100 45
MTP40_RS02100 NONE
MTP40_RS02095 NONE
MTP40_RS02090 NONE
MTP40_RS02085 NONE
MTP40_RS02080 NONE
MTP40_RS02075 NONE
MTP40_RS02070 NONE
MTP40_RS02065  442013 ..  442038 -    -9  -5.72622   GCCACAAAGAAAAAA         GGCACCCGAC GTTTAA ATCGGATGCC          CCATTTTGGTTGTTA 100 198
MTP40_RS02050  438583 ..  438616 - -10.9  -3.08046   GTTTCACTGCAAAAG     GCCCCACACACCGGC ACTG GTCGGCATGCAGGGC      GTATTTATGATTTGA  74 59
MTP40_RS02015  428044 ..  428059 -  -6.2  -2.94099   CTTTCTTATTATAGA              GAATCT GGAG AGATTC               TGCAAGGGAAACATT  53 148
MTP40_RS02010  426811 ..  426836 - -19.1  -5.03145   GAATTGTGCAAAAAA         TCGAGGACGGC AGGT GCCGTCCTCGA          TGGGAAGGTTTATAG 100 35
MTP40_RS02005 NONE
MTP40_RS02000  425217 ..  425227 -    -4  -2.58544   CGCGATGCTTATAAT                 TTCT GGC AGAA                 CTCTATTCTCTCTTT  44 8
MTP40_RS01995 NONE
MTP40_RS01990 NONE
MTP40_RS01985  422489 ..  422530 - -11.7  -4.65153   TTATACAAATCAAAA CACCGCCCGATTCTGGT GAAGGAGA ACCAGAATTGAACGGTG  CAAATGGAAGAAGGA 100 56
        mobC NONE
MTP40_RS01975  419597 ..  419618 -  -3.6  -4.09685   CTTTACGTCCGAAAA           GACAGAGG TGCTAC CCTCCGGC            CCAATGGGTGGGGTA  58 118
MTP40_RS01970 NONE
MTP40_RS01965  417459 ..  417491 -  -9.9  -3.24021   CCGGTAAATATGTAA     GGGCCTGCCGCTCC TGACCC GAAGCAGCA-GCCC      AAAAAAGTGCGAGAA  70 291
MTP40_RS01960 NONE
MTP40_RS01955  415511 ..  415542 - -18.2  -4.26903   TCGAGCGCACCAAAA      TCCCACGAAGAATC GTAA GATTCCTCGTGGGA       TTTTCCATTTTCTGG 100 146
MTP40_RS01935 NONE
MTP40_RS01930 NONE
MTP40_RS01925  411248 ..  411264 -  -9.4  -2.57564   CTATCGGCGGAGAAT              CAGCCC GGCGG GGGCTG              GGCATATTCCGCCGG  63 8
MTP40_RS01920  410976 ..  410987 -  -2.2  -3.04517   AGGCCGGGGCAAAAT                GCAC TTTT ATGC                 GGCCTGCCAGAGTTT  42 20
MTP40_RS14425 NONE
MTP40_RS01915 NONE
MTP40_RS01910  409921 ..  409952 -  -3.7  -2.91695   GGGACTTTCAAAGTA      GCATGAGAGAAGC GGGGCA GCTTGTACCATGC       GAAACGAAAGCCCTT  43 42
MTP40_RS01905  409402 ..  409436 - -13.5  -5.00616   CCGGGGGTCAAAAAA     GCCGCCTGCCCTCTA TAGCT CAGAGGGGCGGCGGC     TTTAGATGTCAATTA 100 38
MTP40_RS01900  407783 ..  407834 -  -8.9  -3.61715   GATTCTTCCCAACAA GTTCTTGCAACGCAAGGGGCCGTGT ATGT ACAGGGCCA-TTGC-TTGCAAGAGC AGCGTATTGTATATA  66 165
MTP40_RS01885  405957 ..  405972 -  -6.2  -2.94099   CTTTCTTATTATAGA              GAATCT GGAG AGATTC               TGCAAGGGAAACATT  53 148
MTP40_RS01880  404724 ..  404749 - -19.1  -5.03145   GAATTGTGCAAAAAA         TCGAGGACGGC AGGT GCCGTCCTCGA          TGGGAAGGTTTATAG 100 35
MTP40_RS01875 NONE
MTP40_RS01870  403130 ..  403140 -    -4  -2.58544   CGCGATGCTTATAAT                 TTCT GGC AGAA                 CTCTATTCTCTCTTT  44 8
MTP40_RS01865 NONE
MTP40_RS01860 NONE
MTP40_RS01855  400402 ..  400443 - -11.7  -4.65153   TTATACAAATCAAAA CACCGCCCGATTCTGGT GAAGGAGA ACCAGAATTGAACGGTG  CAAATGGAAGAAGGA 100 56
        mobC NONE
MTP40_RS01845  397511 ..  397532 -    -8  -4.09685   TTTTACGTCCGAAAA           GACAGAGG TGCTAC CCTCCGTC            CCAATGGGCGGGGTA  73 118
MTP40_RS01840 NONE
MTP40_RS01835  395372 ..  395404 -  -9.9  -3.24021   CCGGTAAATATGTAA     GGGCCTGCCGCTCC TGACCC GAAGCAGCA-GCCC      AAAAAAGTGCGAGAA  70 292
MTP40_RS01830 NONE
MTP40_RS01825  393424 ..  393455 - -18.2  -4.26903   TCGAGCGCACCAAAA      TCCCACGAAGAATC GTAA GATTCCTCGTGGGA       TTTTCCATTTTCTGG 100 146
MTP40_RS01815 NONE
MTP40_RS01810  390680 ..  390713 - -15.4  -4.65168   AGCATAGCGTAAAAA     GAGACGGTTCTGCA TCGGAT TGCAGGACCGTCTC      TTTTGCTTATAACAG 100 32
MTP40_RS01795 NONE
MTP40_RS01790  387401 ..  387426 -  -3.3  -4.28651   ACGAAAATGCCAAAA         GGCTCTGCCTAT ACA ATAGGC-GAAAC         GGGGGCGAATGTCAA  60 114
MTP40_RS01785  386754 ..  386776 - -14.1  -5.02074   CGACGGCGCAAAAAA           GCCGCCCGG CTTTC CCGGACGGC           TTAGGATGTACGTTG 100 47
MTP40_RS01780  385845 ..  385871 - -20.2  -4.59414   GCAGAATAAGGAAAA         GACCCGGCTGCC GAT GACAGCCGGGTC         TTTGTGTCTGCGGGA 100 69
MTP40_RS01690  369331 ..  369346 -  -8.2  -2.89564   GGCGTATTGTAGACA              GAGCGG TCAG CCGCCC               AGCAGCCAGAGCACC  62 16
MTP40_RS01685 NONE
MTP40_RS01680  367775 ..  367803 - -13.3  -4.37658   AATCGGCGCAGAAAA        GGACGATACAC GAAAAAA GTGTATCGTCC        CAGGAAGAGTTCTGC 100 42
MTP40_RS01675  367271 ..  367283 -  -9.1  -3.63341   AACAGTCGTCAAGAA                GGCAG ACG CTGCC                ATCGATGCTAAAGCC  66 174
         gpr  366138 ..  366150 -  -4.8  -3.44051   CTCCCAGTAGGAGAA                GCTG GTCAG CAGC                AGCATAAATCTGGCC  52 83
MTP40_RS01660  364900 ..  364916 -  -6.5  -2.60496   GCCCTTGGCAAAGAG              GGCAGGT CGT ACTTGCC              AAAGAAGCAGATGCG  53 53
        asnS  361421 ..  361441 - -12.5  -3.06315   CCAAGAGCCGCAATA            GGCTCCCCC TTC GGGGGAGCT            GGCAAAGCCGACAGG  81 69
MTP40_RS01645 NONE
MTP40_RS01640  359877 ..  359911 -  -9.3  -5.24129   GCGGCGTATAAAAAA    GCGCACCACAGCTTGC AGGG ACAAGCCG-GGTGCGT     TTTTCGGTGTTTGGT 100 41
MTP40_RS01635 NONE
MTP40_RS01630 NONE
MTP40_RS01625  357141 ..  357173 - -17.8  -4.82901   TCCTGCGCACAAAAA     GAACACCCCCGCGCC TTTG GGC-CGGGGGCGTTC      TGCTGTGATAGGGAA 100 43
MTP40_RS01610 NONE
MTP40_RS01605 NONE
MTP40_RS01600  352892 ..  352903 -  -2.2  -4.25283   ATCCGTGGAGGAAAA                GAGCG GCT CGC-C                GGTGACGACATCCAC  57 201
MTP40_RS01590  349964 ..  350002 -  -9.1  -4.21936   TTTATAAGTTCAAAA  TGGAGCACAG--TTGAACA CCC TGTTCAAAACTGTGCGCCA  TGATTTGGTGATTTT  80 39
MTP40_RS01585 NONE
MTP40_RS01580 NONE
MTP40_RS01575 NONE
MTP40_RS01570  347136 ..  347167 - -13.8  -5.24129   TCCTTCTACAAAAAA      GTCCGGCAGGAA GCGTTTTA CTCCTGCCGGAC       TGCGGACCCCTTGCA 100 62
MTP40_RS01565 NONE
MTP40_RS01560 NONE
MTP40_RS01555  344079 ..  344113 - -16.5  -4.73613   CCATTACTAAGAAAA     CGCCGCCGCACAG GTCGCAATT CTGTGCAGCGGCG     TTCCTATGGAGGATG 100 68
MTP40_RS01535 NONE
MTP40_RS01530 NONE
         alr NONE
        lepA  337499 ..  337553 - -15.7  -3.97139   GAAGGGCAAGAATAA TGCAACAGCCCCCACGGTATGCAGC TTTTT GCTGTATCTGGTGGGGGCTGTTGCT GTTATTCTATGATAG 100 54
MTP40_RS01505  335298 ..  335354 -  -6.1  -3.81701   GAGAAAGTAAGACAA TAAATAGAGAGCTC-TCTTGCATC GCAGCAAAAT GATGCAGGGGGAGCTCTCTGTTTA TGTTTTGGGAAATTC  64 23
MTP40_RS01485 NONE
MTP40_RS01480 NONE
MTP40_RS01475  329737 ..  329762 - -14.7  -5.44198   AATAAACAACAAAAA         CGCGCTGTGTC GTTT GACACGGCGCG          TTTTTCTTTGCTGCT 100 59
MTP40_RS01415  315423 ..  315445 - -14.1   -4.8622   TTTGTCAACGAAAAA           GCCCCCGCC GGGCA GGCGGGAGC           GAGGGGAAACTCAGC 100 36
MTP40_RS01410  314856 ..  314880 -   -15  -5.67063   TTGACGACAAAAAAA          CGCTCCCGCC GGAAA GGCGGGAGCA          GAATGCAAGGATTAT 100 72
MTP40_RS01405  314306 ..  314331 - -11.8   -5.0925   TGTTAAAATCAAAAA         CGCCCCCGCC GGCAAG GGCAGAGGCG          CAAGGGAAATATCAG 100 37
MTP40_RS01400  311655 ..  311689 - -12.9   -3.9461   TGTCCTCAAGAATAA    CCCTCTCAG-CCACGC AGAC GCATGGACAGAGAGGG     CGTTTGATTGTTCAC  93 111
MTP40_RS01395  311218 ..  311232 -  -4.2  -2.50074   TTCGGGATAACATAT               CCGAAC ATG GCTCAG               CTCTTCTTGATGAAC  44 22
MTP40_RS01390  310377 ..  310393 -  -9.3  -4.56636   AAAAATCAAGGAAAA              CCGCCGG GAT CAGGCGG              TTTTGTCCTTCTTTT  90 18
MTP40_RS01385  309468 ..  309492 - -17.9   -5.2189   TGAATCAGCAAAAAA          CCTCCCTGCCA CGC CGGCAGGGAGG          TTTTTTTGTTTGTTC 100 59
MTP40_RS01335 NONE
MTP40_RS01330  297443 ..  297456 -  -3.7   -3.4811   CCCCTTATAACAACA               GCAGG AACG CCAGC                ACTGCCATCAGGGGC  50 1
MTP40_RS01325  296573 ..  296612 - -10.8  -5.27938   ACGCGGAAATAAAAA  CAAGCGA-AAACCACCGGC AGA ACCGGTGGTTTATTGCTGG  AGAAAAGGGCGCTCA 100 38
MTP40_RS01320  295411 ..  295455 - -16.6  -4.90079   AGCGGAACAATAAAA GAGCAGTGCT-TCCGGTGGGT GGAA ACCCATTGGAGAGCACTGCTC TTTCTTTGTGGGAAA 100 59
MTP40_RS01250 NONE
MTP40_RS01245  276428 ..  276450 -  -5.4  -4.80487   CATAAGTAAAATAAA           CCCGCCCCGG TTT CCGTAACAGG           ATGATATGAACCCCA  75 61
MTP40_RS01185 NONE
MTP40_RS01180  258778 ..  258793 -    -9  -3.66908   TTGCTCTAAAATGAA              GGGAGT CGAA ACTCCC               TGAGTTTTGATTAGG  74 36
MTP40_RS01175  258546 ..  258562 -  -5.1  -3.32769   TTCTCAAAGCATTAA              GGTGG TGGCTTT CCACC              GATTGTGACCGGAAT  54 5
MTP40_RS01170 NONE
MTP40_RS01165 NONE
MTP40_RS01160  256492 ..  256527 - -19.2  -3.90112   TGCCTGCCAAGGAAA    GAACATGACGGATCCT GAAA AGGAACCGTCATGTTC     TTTTTTGATGAATTT 100 241
MTP40_RS01090  241647 ..  241678 - -10.9  -4.55887   CGGGAAAAACACAAA      GCCGCCCTATATC AGTACA GATACAGGGCGGT       GCTTTTTGTATAATA 100 62
         pth  240890 ..  240931 -  -2.4  -4.89966   ATATCGAAAAATAAA CCCTATGCCAAGGCCTCTCCT ACT AGGAGAGG--T-GGCATTGCG CAGCAATGACGGAGA  70 54
         mfd NONE
MTP40_RS01075  235865 ..  235883 - -14.6  -2.76261   GGTGAACTGTGAAAG             CCTCCCTC TCA GAGGGAGG             TGGCATCGCGTCAGC  90 90
MTP40_RS01035  225508 ..  225539 - -24.5  -3.96624   TACCGCTATGAGAAA      GAGCCCCCGCCGG TCTATT CCGGCGGGGGCTC       TTTTGGTGGTGTACA 100 43
MTP40_RS01010  220803 ..  220851 - -19.2  -2.81725   ATCGGACACGAATGA CCAACAAAAAAGAGGAACTGCC GGGAA AGCAGTTCCTCTTTTTGATTGG GTAAGATCAGAAGGT 100 32
        aroD  205304 ..  205350 - -15.8  -4.95302   GGAAACAGAATAAAA CAGAAAGCGCCCCCGGAAGGCA GAT CGCTCTCCGGGGGCGCTGTGTA TTGATAGATCAGTTG 100 34
MTP40_RS00850  185216 ..  185228 -  -3.3  -2.74523   GCACCGTGAACATCA                GGTGG CCT CCAGC                AGGGTCTTGAGGGCG  42 10
MTP40_RS00845 NONE
MTP40_RS00840  184276 ..  184332 - -23.4  -4.77165   TGCTTCAGAACAAAA GCAGATAACCAAAAAGGGACGATGCC GCAAA AGCATCGTCCCTTTTTGGTTATTTGT GCTCCTTCAGCTGGC 100 18
MTP40_RS00820  178522 ..  178552 -    -9  -4.27584   ACCTGCAATTGAAAA       TCCCCTGACTAG TTCAACG CCGGTCAGGGGA       TTTTTGATTTATTGA  80 63
MTP40_RS00810  173939 ..  173956 - -11.3  -5.66229   ATCAATAACAAAAAA             GGACTGC GAAA GCAGTCC              TTTTTTGCGTGTTTA 100 38
MTP40_RS00745 NONE
MTP40_RS00740  160354 ..  160364 -  -8.2  -4.11216   TTTCTATCCCGAAAA                 GCGC TTT GCGC                 TGCCGGCTCAGAGGC  76 33
MTP40_RS00735  159635 ..  159666 -   -13  -4.07568   TGCCGTTGCCCAAAA      CGTGGGCAGAGCAC AAAA GCACCCTACCCACG       AAGCAGCATTGTTTT 100 65
MTP40_RS00730 NONE
MTP40_RS00725  157372 ..  157390 - -14.6  -2.71712   TGGGGGTGGCCAAAG             CCTCCCTC ATG GAGGGAGG             TGGCATCGCGCAGCG  90 55
MTP40_RS00720  155792 ..  155814 - -17.8  -5.42265   TGAAATTACAAAAAA           GGACTGCTCC GCT GGAGCAGTCC           TTTTTACGTTTTGAG 100 57
MTP40_RS00715  154760 ..  154782 - -13.4  -4.90217   TAAACACAGCAAAAA           GTCCCGACCA GAA CGGCCGGGAC           TTTTTTGCGTTTAAT 100 36
MTP40_RS00695  149620 ..  149655 -   -19  -5.04597   ATGCACAGACAAAAA    GGGCCTGCCGCCAGCA CGCG CGCCAGCGGCAGACCC     CTTCATGGTGTCTGT 100 166
MTP40_RS00690  148974 ..  149014 - -14.9  -4.31688   AATATGAACTGAAAA GCCCGGAACC--ACCTGCC GCCAT AGCAGGTACGGTTCCGGGC TTTTTTGCTGTGCGG 100 61
MTP40_RS00665  143108 ..  143122 -  -2.9  -4.11394   ATCGCAGGCTCAAAA               TGATA GCTTA TATCA               ACAGAAACGGATGCC  56 150
MTP40_RS14420  141194 ..  141227 - -18.1  -4.67234   ATTGAACCGCAAAAA     TGCGCCGCCCCACCG GAAA CGATGGAGCGGCGCT      GTTTTTATGTGGTTC 100 75
        prmA  129365 ..  129383 - -10.2  -2.64155   TGCTTCGCAAATCCA             GCTCCCCC AAA GTGGGAGC             CTTTGGCAGTCCACG  69 143
MTP40_RS00585  128517 ..  128556 - -15.2  -4.68655   GAACGCGAAAATAAA  GTAAACAAAAAGGACGGC ATGC GCCGTCCTTTTTGTATAT   GTGGAAATAAAAATT 100 39
MTP40_RS00570  124908 ..  124937 - -17.9  -5.00895   TCTATCATACAAAAA       GAAAGCGGCCTGC TTCT GCGGGCCGCTTTC        TGCATGGTGCAGGGG 100 41
MTP40_RS00560  123106 ..  123129 - -18.2  -5.39755   CATAACCACAAAAAA          GGGAGACCCC GCAG GGGGTCTCCC           GATTTTGGTTTATTC 100 35
MTP40_RS00535  117564 ..  117584 - -12.5  -3.69354   GCCCACAATGCCAAA            GGCTCCCCC TTT GGGGGAGCT            GGCAGCGCCAACGGC  88 63
MTP40_RS00525 NONE
MTP40_RS00520  115058 ..  115091 - -21.1  -5.60993   TCCGGCAGAAAAAAA     CAGGGCTGCTCCACA TCTC TGTGGGGCAGCCCTG      TCTGGCTGTGCGGGG 100 80
MTP40_RS00510  113342 ..  113363 - -11.5  -4.63218   TCTCCGCCAATAAAA           GGCACCGGC TCAG GCTGGTGCC            TTTTTTGCGGCAAAG 100 148
MTP40_RS00500  110413 ..  110448 - -18.3  -4.96848   TGCCGCATACAAAAA    CCGCCCCGGCGGCTGC TTTGT GCAGT-GCCGGGGCGG    TTCGTTCGCTTTTGG 100 61
MTP40_RS00460 NONE
MTP40_RS00455  100509 ..  100559 - -22.1  -4.56597   GCCGGTCTGTAAAAA CGAGAAAGAACCCCGGAGCTGCAG GAAA CTGCAGCTCCGGGGTTCTTA-TGG TTTCTCTCAGGGTCT 100 63
MTP40_RS00370   80032 ..   80046 -  -8.5  -4.84311   CGGGAGACAATAAAA               CCCCG GAACA CGGGG               CGATTTTGCGGAGCT  88 50
MTP40_RS00365   79531 ..   79565 - -13.6  -3.19859   TAAGGCATAAAATGA    CCCCGGAGCGTTTGC TGTGAT GCAT-CGCTCCGGGG     TTTTGTGATGTTATG  88 43
MTP40_RS00355   77497 ..   77509 - -10.5  -4.18119   AGGAAAGGATATAAA                CGCGC GCT GCGCG                ATTAGCATTTTTGCC  85 57
MTP40_RS00300 NONE
MTP40_RS00295 NONE
MTP40_RS00290 NONE
MTP40_RS00285   64421 ..   64467 - -17.7  -3.54424   GCGGAGCTGCTTAAA TG-CAAAACAGACCAAACCTAT TTGT ATCGGTTTGGTCTGTTTTGTCA TAAAATCAGAACGGA 100 31
MTP40_RS00280   63995 ..   64012 -  -8.5  -2.75528   AGGTGTAACACACTA             GACTTTG CAAG CAAAGTC              GTGTGCCAAAGGGGT  62 77
MTP40_RS00270   61907 ..   61945 -   -19  -4.36914   TTCTCCTTTAGAAAA   GTGAAGTGGTGGGTCTCA CGG TGAGACCCACCACTTCGG   GTGAATAAATTATCA 100 38
MTP40_RS00265   60429 ..   60446 -  -6.3  -3.94188   ACGGACTTCAAATAA             CCTGTACG GTT CGTAC-GG             CGTGCAGAAATTCAA  66 147
MTP40_RS00260 NONE
MTP40_RS00255   59088 ..   59102 -  -2.1  -3.14132   TTGCCTCCTTATCAA              GCTGCC CGGT GG-AGC               CACGCATCGAAGCTG  43 7
MTP40_RS00250   57535 ..   57562 -    -7  -4.46926   CATCGCACCAGAAAA        TGCCGTGAAATC GAAA GATTTCATGGCT         TTTTTGTTTTGTAAG  76 143
MTP40_RS00245   56821 ..   56869 -   -14  -3.85879   TATAAGCCAGAACAA CA-GATGCCCACCAGCTTATGGC GAAA ACCATAGGTCGGTGGGCATCGTG TTCTTTATAAGGGCT 100 40
        mobC NONE
MTP40_RS00215   48953 ..   48974 -    -8  -4.09685   CTTTACGTCCGAAAA           GACAGAGG TGCTAC CCTCCGTC            CCAATGGGCGGGGTA  73 118
MTP40_RS00210 NONE
MTP40_RS00205   46816 ..   46848 -  -9.9  -3.24021   CCGGTAAATATGTAA     GGGCCTGCCGCTCC TGACCC GAAGCAGCA-GCCC      AAAAAAGTGCGAGAA  70 290
MTP40_RS00200 NONE
MTP40_RS00195   44983 ..   44995 - -10.5  -4.07568   CTTTGTTGCTTAAAA                GCCCC ACT GGGGC                TTTCATTGCTTCGCA  85 52
         tig   41470 ..   41504 -  -8.6  -5.10163   AACTGCAAAAGAAAA     GGGCCTGTCTCC CGAAATTCCTT GGAGACAGGCTC     TTTTTGTTGTACTTT  93 47
MTP40_RS00130   27705 ..   27726 -  -5.9  -4.31737   AAAATCACGAAGAAA           GGTTAGTTT TATG ATACTAACC            ACAGTGATATCCCAC  72 55
MTP40_RS00125   27226 ..   27266 - -15.6  -3.73968   AAATTGTGCATGAAA  GAAAAGCAGCAGACCCGC TTTTG ACAGGTCTGCTGCTTTTG  ATGCGTTTTTTCAGT 100 54
MTP40_RS00120 NONE
        rsmI   25321 ..   25349 -  -2.9  -3.91196   TTTATACATATTAAA        CCTCTCAGTCGCC TTC GGCGACAGGTACG        GGTTGCGGCTCCCAG  54 215
MTP40_RS00110 NONE
MTP40_RS00105   23982 ..   24020 - -27.5  -3.53012   TTTGTTTGTCTGAAA   CAGCGCCCCCGGCGGAG CGATC CTCTGCCGGGGGCGCTG   TGTGATATCAAGTTT 100 40
MTP40_RS00095   21787 ..   21806 - -11.4  -5.45802   TGCCCAAAACAAAAA            GCTCCCCC TTTC GGGGGAAC             TTTGTTGGAAAGAGT 100 51
MTP40_RS00080   19336 ..   19353 -  -6.9  -3.61398   CCTTGCCGCCAAGAA             GCTGGGT GCGG ACCCGGC              CATCATGGCGACCCC  60 153
MTP40_RS00070 NONE
MTP40_RS00065   16579 ..   16606 - -16.4  -4.40184   GTAAGGAAACAGAAA        CCGCTGTACGGA ATGT TCCATACAGCGG         TTCTCTCATCCATAT 100 42
MTP40_RS00055 NONE
MTP40_RS00050 NONE
MTP40_RS00045   10059 ..   10112 - -25.6  -3.33744   GTTCTTCTGAAAAAG GGGCAAACAAAACCGGCACAGCGTC AGGCA GGCGCTGTGCCGGTTTTGTTC-CCC GTGGAACATTTTTAA 100 48
