HER31_RS00020    6150 ..    6179 +  -3.7  -3.71517   GTAGCGCTGCAGCGA       CATTAACCGAA ATGAGTTG TTTGGTTAGTG        TTGTATTAGGTGTTG  55 20
         mpl NONE
HER31_RS00045 NONE
         hpt   12488 ..   12503 + -10.4   -5.1675   TTAAGCATTAAAAAA              GCCTCC GTAT GGAGGC               TTTTTTGCTGAGTAA  93 50
        rluD NONE
        pgeF NONE
        clpB   17783 ..   17802 +   -10   -5.2112   TTTAAACAGAAAAAA            GCACAGTC ACAG GGCTGTGC             TTTTTTGATCGTATT 100 46
HER31_RS00075   18215 ..   18234 +  -7.8  -4.99056   GAAAGTAACGTGTTA            GTGCAGTC TCAG GGCTGCGC             TTTTTGCTTCTGTTG  87 63
HER31_RS00080   20346 ..   20368 + -12.2  -4.25566   ACAGATTGTCTGAAA           TCATTAAGTC TTT GACTTAATGA           TTTTGGCTCGTTGTT  95 72
HER31_RS00085   23514 ..   23534 +  -6.1  -3.38291   TACAACACCCAAGTG            GTTTTGCGG ATA TCGCAGAGC            TTGTGAGATTGTAGA  59 28
         rrf   23704 ..   23739 +   -17  -2.87211   GTCAGACACTTATTT    AGAGAAAGCCCGTTCC GAAA GGAACGGGCTTTTTCG     TATCTGCGCCAAAAT 100 34
HER31_RS00105   26590 ..   26607 + -12.7  -5.52096   ACAGTGATAAAAAAA             GACCGCC ATTT GGCGGTC              TTTTTTATTGGCTTT 100 43
        lysC   29981 ..   29999 +  -6.8   -3.7795   TCATTTTCAACTGCA             TTTTGATG ATT CATCGAAA             TTTACTCCACTTTAC  64 497
HER31_RS00125   31157 ..   31174 + -12.7   -3.9777   TGCCGTGACAAAAAA             CGCCAGC AATT GCTGGCG              TTTCTAAATATTAAC 100 84
HER31_RS00155   39734 ..   39767 +  -3.9  -3.60296   ATCAGTAAGCCGGTT     CTGTCTTTG-CCACTG CGA CAATGGATAAGGACGG     TTTGGCCTGAGGATA  52 190
HER31_RS00165   41250 ..   41289 + -12.3  -3.53031   CATAGATCCACTGTT  CGGTCGCTTCT-CAGCTG TTGAT TAGCTATAGAAGCGACCG  TTGGTTTCCAATCGG  93 44
        yjeH   43104 ..   43131 +  -8.5  -2.79183   GCAGAACGGGAGATA        ATGGCTACTGA CATTCC TCAGTAGCCAA         TGTAATGCGAATAGA  64 43
        rsuA   43887 ..   43909 +  -4.8  -2.94045   GTTAACTCAGAGGAG           GTGCTGTCAT GAA ACGATGGCAC           TGGTTGTTACCCTGC  50 84
HER31_RS00185   44469 ..   44481 +  -7.7   -3.2056   GTAATACTGAGCTAT                TACGG GTT CCGTA                TTGGTCACTATGGAT  61 141
HER31_RS00195   45906 ..   45916 +  -5.4  -4.18058   ACCGTAAATCGTTAA                 CTTG ATA CAAG                 TTTTAAGGTATCATT  67 401
HER31_RS00200   46549 ..   46589 +  -4.1  -3.11359   TGTTGAGGCAAAATG  GGGTAAATCATAATGGT GCCATTA GCGATTAAGGTTTACCC  ATTTGGTTTTAGCAC  47 13
HER31_RS00205   47146 ..   47190 +    -6  -2.60888   TTAGCATTTATTAAC TAACAACAGAGCTTATAAAT ACCTA GTTTAGAAATTCTGTTGTTA CTGTTCTATCGTAAT  53 23
HER31_RS00230   53397 ..   53423 +  -2.2  -3.28924   ATGCTCTTAACCTCC         TGAGCAAAGCCA TGC TAGCCTTGCTGA         TTATCAGCAAGGCTA  45 53
HER31_RS00235 NONE
HER31_RS00240   56128 ..   56146 + -13.2  -3.72453   AGGCAGAAACAAAAA             CAGACCGA ATC TCGGTCTG             TTTGCAATTGTTACT 100 383
HER31_RS00260   62089 ..   62112 + -11.6  -4.08216   TAGTTAATCCAGATA          ACCCCGGCGC TTCG GCGCTGGGGC           TTTTCGAGAAGATAC  91 42
HER31_RS00265 NONE
HER31_RS00270 NONE
HER31_RS00275   64071 ..   64082 +  -4.4  -2.92653   ACGCCCAAGCCAAGC                TTGC GGCG GCAA                 ATTTATAACGATGAT  48 6
HER31_RS00280 NONE
        nrfD   65837 ..   65852 + -10.4  -5.15634   GATCGAAATCCCAAA              GCCTGC TTAT GCAGGC               TTTTTTAATGCGCTA  93 59
HER31_RS00290   68297 ..   68320 + -11.6  -4.08216   TAGTTAATCCAGATA          ACCCCGGCGC TTCG GCGCTGGGGC           TTTTCGAGAAGATAC  91 42
HER31_RS00295 NONE
HER31_RS00300 NONE
HER31_RS00305 NONE
HER31_RS00310 NONE
        nrfD   72048 ..   72070 +   -15  -3.79113   GTGATTGATTTAAAT           TAAAGCCTGC TCT GCAGGCTTTA           TTGTTATACAACGAT 100 62
HER31_RS00320 NONE
        nosD   73986 ..   74002 +  -2.2   -2.6563   GGGGCAGAGTCTCCA              GCGC TGTGATAAT GCGC              TGACTTATTGGAACG  39 51
HER31_RS00330 NONE
HER31_RS00335   75748 ..   75775 +  -3.5  -4.90266   GAAAAAACAACAGAA        TGATCGATGAT AATGGG ATCTTTGATCA         TTTTTGCTTACTCGG  72 46
HER31_RS00340   77205 ..   77244 + -15.2  -3.14132   GCACTAATACTGCGC  CAAATAAAAACGTCAGCC CTAG GGCTGACGTTTTTTGTTG   TTACTAAAGCCGGAG 100 45
HER31_RS00370   84011 ..   84028 + -11.3  -5.72207   ATACCAATCGAAAAA             CCACGTC ACTT GACGTGG              TTTTTTTCGTTTCGG 100 53
        yaaA   84890 ..   84921 + -17.4  -3.20721   TCTATTTAACGAACA      CTAAACGCCACAGC ATTT GCTGTGGCGTTTTG       GTTTATTGGTTAGTT 100 46
        murJ   88601 ..   88649 +  -9.1  -2.61728   ACCTGTGCAGTTAAA GGAATG-AC-GTG-ACAGTGGCGA AACT TCGCCACTGTCCGCTGTGCACTCC ATTGGTATTACCCCT  66 48
        ribF NONE
        ileS NONE
        lspA   92991 ..   93007 +  -2.1  -3.21218   CCTAAGCAGCCGAAG              GAGGCTC AAT GAGCAAC              TTAGTAGTAGGGCCT  44 14
        fkpB NONE
        ispH   94404 ..   94421 + -11.3   -5.1417   CGACATAACGAACAA             GCCAGTC ATAT GACTGGC              TTTTTGCTTTTCTAA 100 52
        pilV NONE
HER31_RS00435 NONE
HER31_RS00440 NONE
HER31_RS00445 NONE
HER31_RS00450  101978 ..  101993 +  -3.2  -3.09273   CGAGCCAATACCCGC              GGCAAA AAGC TTCGCC               TCTATATTCCCCAGA  45 53
HER31_RS00455 NONE
HER31_RS00460  104045 ..  104068 + -16.8  -4.06419   GATCGGCTGCATATA          CAAAGGCGCC GATT GGCGCCTTTG           TTGTTTGTCCAGCCA 100 45
HER31_RS00465 NONE
HER31_RS00470 NONE
HER31_RS00475  106742 ..  106763 + -10.2  -3.08176   CCAGTTTGAAAACCA           GCCCAGAA CTGCAA TTCTGGGC            TCTGTGTGCTTGTTA  73 254
HER31_RS00485  108168 ..  108183 + -10.4  -5.32944   GGATGATATGAAAAA              GGCTGC GATT GCAGCC               TTTTTTGATTCTAGC 100 47
HER31_RS00525  115535 ..  115549 +  -3.6  -2.71924   GTAATCCCAATGTGA               TGATTG GCT TAATCA               CTTTAACCGACGCTC  44 305
HER31_RS00565  122200 ..  122220 +  -5.4  -3.19018   AAAATTCCTCCATAA            GAGTGACA TTGTT TGCCACTC            TTAGCTTCGGCTATT  54 64
         tkt  124366 ..  124390 + -18.7  -6.15259   TCCGGTTTTAGTAAA          CGCCTTAAGCC TCT GGCTTAAGGCG          TTTTTTTTTGCATTA 100 46
HER31_RS00575  125807 ..  125835 +  -3.7  -3.71265   AAACAAAAATGCCTT        CCAGTTACGTTGC AGT GTGCCGTAGCGGG        TTTCAATAATATGTT  54 140
HER31_RS00585  126703 ..  126719 +  -5.1   -4.3739   CTCCGCCACAAAGGA              GATCAGT GAA ACTGACC              TTTTCTCAGGGGGTG  68 17
HER31_RS00590  126964 ..  126984 + -11.1  -4.90266   CAATATCAACAAAAA            CGGCAACCA TTG TGGCTGCCG            TTTTTCGTTACTCGA 100 42
         ffh  130891 ..  130911 + -15.5  -5.08088   GGCGGGCTTTCTACC            TTGGGGCCA TTA TGGCCCCAA            TTTTTATTCACCATT 100 138
        rpsP NONE
        rimM  131728 ..  131738 +  -5.4  -3.02946   ACAAATTAAAGTCGA                 TTGG GAC CCAA                 GTTTCTAATTAGGAG  52 7
        trmD NONE
        rplS  132933 ..  132956 +   -16   -5.4182   CGTTTCAGTCTTAAA          CAGGTCCGCC ATTT GGCGGGCCTG           TTTTTGTTTGTGGTT 100 73
HER31_RS00630 NONE
        tyrA  135341 ..  135380 +   -21  -5.53288   CTAGGCGGCTAACGG  TGCCAACTTGTGGCAACA GGCT TGTTGCTACAAGTTGGCG   TTTTTTTAAGTTGGC 100 37
HER31_RS00640  135755 ..  135772 +  -2.8  -2.88544   AATTCCCCCCTGCCT             TTAGAA AGCCCA TTCTAA              TGTCTCCCCATAGAC  42 73
HER31_RS00645 NONE
HER31_RS00650 NONE
HER31_RS00655 NONE
HER31_RS00660  139244 ..  139262 +    -6  -2.97456   CCCAATGGTTCAAAC             TGCTCG CGCTTGT CGAGCA             TCTGTCGTGATATCT  52 226
HER31_RS00690  146128 ..  146160 +  -3.4  -5.29445   AGGGCAAGATGCTCT     GCGCGCTGAGCAAAC GCTT GTTTGTCCATCG-GC      TTTTTCTTCTTCAAC  80 383
        trpR NONE
HER31_RS00705  148076 ..  148102 + -15.2  -3.84183   GCCGTTAAGGTTGAG         AAAAAGCCGCCC ATA GGGCGGCTTTTG         TGTTTTATCGTAGCC 100 41
        rlmD NONE
        relA NONE
        mazG  156298 ..  156308 +  -2.6  -2.80113   GCTGAACTCAGTGTT                 TTTT AGT AAAA                 TGTCGTCCCGTCCTA  41 62
HER31_RS00735  158045 ..  158065 + -10.4   -6.4275   AACAGAATTTTAAAG            CCGGGCCT CAAAT AGGTCCGG            TTTTTTTTGTTTTTG 100 39
         eno  159473 ..  159501 + -12.6  -5.27476   TTGCAGTTTGTTTAT       G-AAAAAGCCGCC TTAG GGCGGCTTTTTGC        TTTTCTTTTGTTAGG 100 98
        ftsB NONE
        ispD NONE
        ispF  161394 ..  161414 +  -4.6  -4.19506   TAAAAAACTCCGCAC           CGG-CGCCC TGTT GGGCAACCG            TTTTAAGATTGCCAT  64 392
        surE NONE
HER31_RS00770 NONE
HER31_RS00775  164623 ..  164633 +  -3.2  -3.65827   TAGTGGCTCGTTTGG                 CTGA CCG TCGG                 TTTACATCAGCGTTG  51 84
        rpoS  165713 ..  165739 + -13.7  -5.13344   TCCATTTTAGAAAAA         CGCCGCTGGCT TGTTT GGTCAGCGGCG         TTTTTATCTTGGTGT 100 53
        recA  169805 ..  169820 +    -9   -3.3334   TTAAAGATAAGTCAA              GCCAAG ATCC CTTGGC               TTGTGCGGTGGGATT  71 68
HER31_RS00795  170609 ..  170625 +  -2.2  -3.88232   TGCAGCAACGTCAGT              GCGGGT ACTGA ATCTGC              TTGTTCTATGCACAG  53 393
        alaS NONE
HER31_RS00830  178977 ..  178992 +  -4.6  -2.52676   ATCGTTAAAAGATTC              TACCGC CTTT GCGGAA               TGAGTTAGAGAAATA  46 87
        csrA  179226 ..  179245 + -13.6   -5.4492   TCTAATTTAAGAAAA            GCCGATGC GATA GCATCGGC             TTTTTTGTATCTATA 100 36
HER31_RS00840  179934 ..  179961 + -16.4  -4.46212   CTCCGCCATTTTTAA        G-AGAAGCCGCGC ATA GCGCGGCTTCTTC        TTTTGTCCTAACAGG 100 33
HER31_RS00845 NONE
HER31_RS00850 NONE
HER31_RS00855 NONE
HER31_RS00860 NONE
HER31_RS00865 NONE
HER31_RS00870  180795 ..  180826 + -16.8  -2.87132   GCGCGCCATATAAAA      GC-AAAAACCCAGCC TCT GGCTGGGTTTTTTGC      TATCTGGAGAAAAGG 100 33
        nsrR NONE
HER31_RS00880 NONE
HER31_RS00885  185170 ..  185189 + -11.4    -5.626   GCAACTCATTAACAA            CGGGTGGC TTTT GCCACCTG             TTTTTTTCTGACATA 100 56
HER31_RS00890  186808 ..  186832 + -13.6  -5.54264   GGCTGGATATAAAAA          TCCCCCGAGT GTTGA GCTCGGGGGA          TTTTTTTGGCTGTTT 100 66
HER31_RS00900  189030 ..  189057 + -12.6  -4.49756   ACACAGCCCAAAAAA        GGCCGCCCCAAG TATG CTCAGGGCGGCC         TTTTGCTGTTTCAGC 100 285
        pomA NONE
HER31_RS00925  194272 ..  194287 + -10.4  -4.29326   CACAGCCTATTTTTA              GGGGAC TTTT GTCCCC               TTTGTTGCATTTCAG  85 287
        thiI  196048 ..  196067 +   -15  -5.19212   GCCATTAACGACAAA            GGGCAGCC ACTA GGCTGCCC             TTTTTTGATCGTAAT 100 45
        aroG  198239 ..  198251 +  -6.3  -3.65902   CGCCACAGTACGGTG                GTGAT GTC ATCAC                TTTGGCTAAACTCGA  62 411
HER31_RS00955  199760 ..  199773 +  -8.1  -5.64421   AACTAATCTAAAAGA               GGAGC TACG GCTCC                TTTTTTATTTGAAAT 100 52
HER31_RS00990 NONE
HER31_RS00995  207589 ..  207600 +  -4.4  -4.78237   CACGCTTCCGCAGTC                GGAA ACGG TTCC                 TTTTCTTCTACCATA  73 126
HER31_RS01000 NONE
HER31_RS01005 NONE
        dctP  210672 ..  210697 +    -9  -4.84359   AGTGTTCGCTGCAAA         TTGACCCCGC CTCTCA GCGGGGTTAG          TTTTTATGGGCATAC  90 45
        luxS  211264 ..  211292 + -13.9  -4.79756   AATCGCTTGTTCTAA        GGCCTGTGATATC GAT GATGTCGCGGGCC        TTTTTAGGTTGTGTC 100 47
HER31_RS01020 NONE
HER31_RS01025 NONE
HER31_RS01030 NONE
HER31_RS01035 NONE
        nqrE NONE
        nqrF NONE
HER31_RS01050 NONE
HER31_RS01055 NONE
        dinB  221927 ..  221960 +  -5.3  -4.53398   TTGCTGAAACAACAA     CACCGCATCAATC ATCTCAGC GAGTAATGCGGTG      TTATTTTTGCTGTTC  71 61
HER31_RS01070  223313 ..  223326 +  -9.5   -4.4195   TAGAGCAGTTAATAA               GGGGC TATG GCCCC                TTTTGTCGGCTGTGT  86 50
HER31_RS01075  228600 ..  228619 + -12.2  -4.13728   ATTACCTAGTCAAAA            TGCCAAGG TTAT CCTTGGCA             TTTTGACGCTATGTA  93 56
        ahpC  229966 ..  229979 +  -5.9  -4.96848   AACGCTCATGTGGCT               GGGGT ATGC GCCCC                TTTTTATATCGACCA  78 105
        ahpF  231680 ..  231699 + -16.4  -5.05601   ACCGATTCGACTTGT            CGCCGCCC AACA GGGCGGCG             TTTTTGTGTCTACTG 100 48
HER31_RS01090 NONE
HER31_RS01095 NONE
HER31_RS01100 NONE
HER31_RS01105 NONE
HER31_RS01110 NONE
HER31_RS01115  239828 ..  239838 +  -3.2  -3.46167   AGCATACAACCCAAT                 CGGT TTT ACTG                 CTTTTTCGCTTGTAG  50 92
HER31_RS01135  244388 ..  244416 + -11.8  -2.51547   GATTTAGCTAAGGCT        TTAGCTAGCGGA ACGTA TCCGCTAGCCAA        GTATTGCTGTCAGCA  79 47
HER31_RS01145  245554 ..  245568 +    -7  -3.60098   TTGTATGCATTAGCG               GGGAGC TTC GCCCCC               TTTGGAATCCCCCCT  64 184
HER31_RS01160  247715 ..  247747 +    -5  -2.89568   TGGTGCTGCATGTTG     TTGGTAGGGG-AAGA TGCT TCTTACCGTTACCAA      AGTTTTTTATATGTC  50 19
HER31_RS01165  248277 ..  248298 +  -8.7  -2.78395   GGGCAGCCACCAAGG           CCAGCGACA GAAC TGTCGATGG            TGCTTACTCCAAGTT  62 293
HER31_RS01205  258190 ..  258207 + -12.7  -3.08015   CTAGGAAACCAAACA             GCCCGCT AATT AGCGGGC              TGTTGCAGTAGTTAG  83 50
HER31_RS01215  260326 ..  260341 +    -9   -2.9583   TTCATTAATGGCACA              GTAGCG TAAT CGCTAC               TAATTTAAGTCATTG  67 51
        tesB  261269 ..  261285 +  -8.7  -5.46129   GAACTTGATCGAAAA              GCAGCTG TTT TAGCTGC              TTTTTTGCTTTGTTA 100 62
HER31_RS01225  263062 ..  263076 +  -4.2  -4.56597   CTGAGCCAGCTCAGG               CTAGCT AAA AGCAAG               TTTTTGCCAACGCCG  66 18
HER31_RS01230  263555 ..  263574 + -13.6  -4.28994   GTTGCTAACCCGAAA            TGCCGAGC GTTT GCTCGGCA             TTTTGGTAACTGGTG 100 48
        ompW  265386 ..  265409 + -19.6  -4.88736   TAATCGATATAAAAA          CGGGGGGCTC AATT GAGCCCCCCG           TTTTTATAAATGATA 100 48
HER31_RS01295  277295 ..  277317 + -11.3  -5.76949   TGCGACAACGAAAAC           CGCCAATGG AATTG CCGTTGGCG           TTTTTTTTGGCAGTG 100 68
HER31_RS01315 NONE
HER31_RS01320  282637 ..  282669 +  -7.8  -3.90112   TTGGTGCCATGCTTT      TAACGTCGGTGAGT GGATA GCTTATCGGCGTTA      TTTCGTTAACAACGA  72 82
HER31_RS01325 NONE
HER31_RS01335  286552 ..  286572 +  -8.3  -4.87665   ATATCCCTGTAAACA            GAGCTGG CGTTGGT CCAGCTC            TTTTTCTAGGTGGAC  87 103
HER31_RS01345  287954 ..  287971 + -12.7  -5.52023   CACAGCCTAAAAAAG             GCCTCGC AATC GCGAGGC              TTTTTTGTTGCTAAT 100 343
HER31_RS01355  290566 ..  290582 +  -6.5  -3.39018   TATGGAGGCTGTCTT              TTAGCGC CAT GCGCTCA              TGTTTAAGCTCATGG  60 121
HER31_RS01365 NONE
HER31_RS01370  292752 ..  292776 +  -3.7  -4.67968   AATCAAAATAGAGAA          TACTAGTTA ATATTTA TAACTGGTA          TTTGTTATTTATTAA  69 123
HER31_RS01375  295153 ..  295174 + -15.9  -6.19443   CGCTGATATGGCTAA           GCCGGTGAG ACTA CTCACCGGC            TTTTTTTTTGCTGTG 100 45
HER31_RS01380 NONE
HER31_RS01385  298173 ..  298186 +  -2.4  -2.61216   CTCAAGTAGCCAATT               TAGG AGATAA CCTA                TGAGTTACTTAATGG  39 32
HER31_RS01390  299351 ..  299375 + -15.8  -4.56597   TTGGTTAAGCTCAGG          CGCCGACAAG CTCAC CTTGTCGGCG          TTTTTACCGGAGGGC 100 33
HER31_RS01395  301324 ..  301334 +  -5.4  -4.21812   TAGTGTCCCAGTGCT                 CAAC GGT GTTG                 TTGTTTTCAATGCAA  67 165
HER31_RS01415 NONE
HER31_RS01420  305632 ..  305653 + -10.9  -2.72043   TATGCCGCCGTTTTG           GGCTGAGTT TATG AGCTCAGCC            ATTTGCAGCGGCATT  74 12
HER31_RS01425 NONE
HER31_RS01430 NONE
HER31_RS01435 NONE
HER31_RS01440 NONE
HER31_RS01445  309670 ..  309687 + -12.7   -4.2008   CACAGCCATAAAAAA             GGGACGC CGCA GCGTCCC              TTTGTTCCAATCTGT 100 410
HER31_RS01455  311245 ..  311274 + -10.1    -2.981   ATCGATCCAATCTGG       TTGCAGCGCTT CGATTCAT AAGCGCTGCAG        GTTTCTCGGTTAGGC  72 5
HER31_RS01470  315078 ..  315094 + -10.8  -5.65513   TGCAAATACAAAAAA              CCGGCC ACTAG GGCCGG              TTTTTTTAGTTGGTG 100 85
HER31_RS01485  318589 ..  318612 +  -6.1  -3.15544   CCTTCCGATAGCTTG          TAACCAAGT CAACCA GCTTGGTTA           TTGGTAGAGATGACG  57 73
HER31_RS01615  338077 ..  338102 +  -9.7  -5.14563   CAAAAACAAAAAAAA         CACGAGTAGGG CTAG CCTAACTCGTG          TTTTTTGATGAACAA  93 64
        trmB NONE
HER31_RS01640 NONE
        glsB  342164 ..  342190 + -12.4   -4.4078   TGCTATCGTAAAAAA         GAGCCAAAGG TTAATCC CCTTTGGCTC         TTTTAGTTAGGCAGA 100 54
HER31_RS01650  343394 ..  343425 + -13.2  -4.62471   CTGAAAAACCTTAAA      AAAAAGCGGTGATA TCAA TATCACCGCTTTTC       TTTTTAGGGGTTGCA 100 45
HER31_RS01655  344717 ..  344739 +   -12  -5.01732   CATCATCTGGACTAC           TGCCCCAGCG CTT TGCTGGGGTA           TTTTTTAAAAAGATT 100 364
HER31_RS01705  353520 ..  353532 +  -4.1  -3.84639   AGCCGGTAAACAGGC                TTCCT TCT AGGAG                TTGTTATGGATATTC  55 16
HER31_RS01710  354685 ..  354704 + -13.6  -4.62441   ATCTATTTGTCTCGA            CGCCACCT AAAT AGGTGGCG             TTTGTTTGTGTGAGG 100 57
HER31_RS01715 NONE
HER31_RS01720 NONE
HER31_RS01725  359998 ..  360035 + -12.8  -3.08211   TAACTAAGACGGATT   CGCTACCGGAACTGTT ACACCG ATCAGTTCTGGTGGCG    TCATTTTGCGAACCT  83 38
HER31_RS01730 NONE
HER31_RS01735  361927 ..  361949 + -15.6  -5.14477   AACGTAAATAGAAAG           GGGGGAGCTA ATA TGGCTCCCCC           TTTTTTGGCTGTGTC 100 53
HER31_RS01740  363917 ..  363942 + -10.5   -4.8269   TAACCACGATATAAA         GGCGGTATGCAG TAG TTGC-TACCGCC         TTTTTAATGGTTCTG  91 47
HER31_RS01760  368374 ..  368384 +  -5.4  -3.30441   CCATTAGTGAATTAA                 GAAC TCA GTTC                 TTATAAGCAATAATG  56 89
        cysD NONE
        cysN NONE
HER31_RS01775  372502 ..  372512 +  -3.2  -3.94846   TAGTATTGATGTTGG                 TACC TAA GGTG                 TTTCCGTTTTAGTGC  55 3
        cysC NONE
HER31_RS01785  374184 ..  374199 +    -4    -3.254   ATCAACTTTCAAAAT              GGCACAA TGC TTG-GCC              TATTCTGAATGAATA  48 94
        glmM  375635 ..  375658 + -14.6  -4.99035   CGCACAATTGATTTG          CGGGAGAGGT TAAC GCCTCTCCCG           TTTTTGTATCAGTAA 100 46
HER31_RS01795 NONE
HER31_RS01800  377511 ..  377543 +    -2   -4.7254   CAGTTCACATTGATT     GCAGCT-TTGCGGCTG AGT CAACTGCAGTAGC-GC     TTTTTGCTCGACGGT  65 212
         ffs  379187 ..  379198 +  -4.4  -2.79239   TAACTGGCAGTATAA                GTCT GCAT AGAC                 TACGTTTTGATGTAG  47 108
HER31_RS01820 NONE
HER31_RS01825 NONE
HER31_RS01830 NONE
HER31_RS01835  383234 ..  383253 +  -7.8  -2.74012   AAACGGAGATCCTGA            CCGCTTAG TGCC CTTAGCGG             TCATTGAGGTAGTGC  60 97
HER31_RS01840 NONE
HER31_RS01845 NONE
HER31_RS01850  389716 ..  389742 + -15.3  -4.37502   ACTGCTGCTTTCCCG         CGCCTGTTTGA TTATC TCAAACAGGCG         TTTTCGTATGCTAAT 100 119
HER31_RS01855 NONE
HER31_RS01860 NONE
HER31_RS01865  392105 ..  392119 +  -5.6  -4.23781   GAGTAAACCGTTCTC               GCTGGC AAA GCCACC               TTTGGTTTTGGTCAG  66 311
HER31_RS01875  394217 ..  394231 +    -7  -3.65425   CGGCGGGCAGTCGAT               GGCAGG CAC CCGGCC               TTTGGGCTCTATCGC  64 463
HER31_RS01885  395167 ..  395177 +  -2.6  -3.09165   ATTAATTATGTGATG                 TTTA GTT TAAA                 GTTATTTGGTTGTTT  43 40
HER31_RS01890  395762 ..  395808 +  -7.9  -3.23235   GAATGTCCGCTTCTG GCCGATAGTCGACGCTTGCGA AGCGA TTGGAGCCGGCGACTCTCGGC TTCAGTTAGTCTGTG  64 127
HER31_RS01895  397144 ..  397157 +  -2.3  -3.18735   ATCTGCCAGCTTGGT               GAAGC TCAT GCATC                TTGATGAACTATTAG  44 24
HER31_RS01900 NONE
        csy3 NONE
       cas6f  401361 ..  401374 +  -8.1  -4.88918   CTATGAAGTTCTCGA               TGCCC ACCT GGGCA                TTTTGTTTGGAATGC  87 483
HER31_RS01980  415633 ..  415659 +  -3.7   -3.5594   GGAATTGGTTGACCA         CTACAAAAAGC CCCCA GCCTTTTGTCG         TTTGAAGCATAAGTT  52 29
HER31_RS01985 NONE
HER31_RS01990  419750 ..  419771 + -17.3  -5.52384   TGTAACTCATCTTAA           CGGCCGCTC CTCT GAGCGGCCG            TTTTTTTGCTAGAGA 100 49
HER31_RS02020 NONE
       cas5c NONE
       cas8c NONE
       cas7c NONE
        cas4  431631 ..  431642 +  -2.2  -3.64703   TACGTGAGTGGGCTA                TTCC AAAC GGAG                 TTTGAATGAAACAAC  49 5
       cas1c NONE
        cas2  433155 ..  433173 + -13.1  -2.53911   TTACGATAAGGCTGT             CGCGCCC CCTGC GGGCGCG             TGGATTGAAACTTGG  84 204
HER31_RS02055  434794 ..  434814 +  -3.3  -4.62984   AGCGAACGATAAAAA           C-CGCTGA CGGATA TCAGCGAG            TTTTCTGTGTAATAG  66 115
HER31_RS02070 NONE
        dmsB  439513 ..  439534 + -13.7  -3.31726   CCCGATTACGACCAC           GGCGGGCAG CTTG CTGCCTGCC            TATTATCTAAGAGAG 100 45
        dmsD NONE
HER31_RS02085  440704 ..  440715 +  -4.4  -2.67705   ATAAAAGATAATAAG                TTGG AGAT CCAA                 TAGTGTCACTTCTAC  46 30
HER31_RS02090  441527 ..  441547 +  -3.3  -4.62984   AGCGAACGATAAAAA           C-CGCTGA CGGATA TCAGCGAG            TTTTCTGTGTAATAG  66 115
HER31_RS02105 NONE
HER31_RS02110  444490 ..  444518 + -16.3  -2.75074   TTAGTGCGGCGAACA        TTCCTTTAGTGTT AAT AACACTAAAGGAA        TAGTCTTGCGCTAAC 100 17
HER31_RS02135  450924 ..  450950 + -22.4  -4.70659   ACCGCAATGTTAGCG         CGCCACCGACAG CTT CTGTCGGTGGCG         TTTTTGCGTGTGCAG 100 44
HER31_RS02140  452145 ..  452163 +  -6.6  -3.60475   TTGTATGCATTAGGG             GGGGGGGA GCT TCGTCCCC             TTTGGCATCCCCCTT  64 172
HER31_RS02150  454194 ..  454205 +  -5.8  -2.71011   CATCTGCTTGGAGCG                GCGT AGCC ACGC                 TGATTGCCAGCCGCT  50 121
HER31_RS02175  458369 ..  458404 +  -2.4  -2.64616   CCGTAGTTAGCACAA    CATTGCCGCTGAGCAA CAGC TGGCGCAGCAGTAAGG     TGCTGTCGGTCGAAG  39 35
HER31_RS02180  458788 ..  458817 + -15.1   -3.9009   TGCTTAAATGATAAA       GGCGCATTGGG AGGTTAAC CCCAATGCGCC        TTTGTACAATCGATT 100 34
HER31_RS02195  461405 ..  461417 +  -3.4  -3.94634   AATTGGGCTGTGTAC                CAAC TAAGT GTTG                TTCTTTCCAATGCTG  55 164
HER31_RS02200  465178 ..  465191 +  -3.1  -4.19577   TACCCCCAACCGAGA               TTGGC TATC GCTAA                TTGTTTTAAGGCTTC  59 232
HER31_RS02210  466497 ..  466522 +  -6.1  -4.89477   TACAAAGCCTAAAAA         TGCCACATGCT TCCC AACAAGTGGCA          TTTTGTTATTCGCGC  81 147
HER31_RS02220  469285 ..  469324 + -22.4  -3.85567   TTGCGATTCAGCCAT  ACAAAACAGCCCTAGGAC GTGA GTCCTAGGGCTGTTTTGC   TTTAGCTTTGAGCTT 100 71
HER31_RS02230  471030 ..  471053 + -15.3  -4.20806   CGACACAGCCAAAAA          CAGCCCCGC CAATGT GCGGGGCTG           TTTGATTTTAAGCTC 100 324
HER31_RS02240  473840 ..  473865 + -17.7  -3.36175   AGTTAGCGTTACAAA         CAAAGGCGACC GTTT GGTCGCCTTTG          TTGTAGCTGAAGCTT 100 53
        pspA NONE
        pspB NONE
        pspC  482201 ..  482217 + -13.7  -3.97308   AAGTCCTCAACTTCA              GGGAGCC ATA GGCTCCC              TTTGCTGTATTTAAG 100 39
HER31_RS02290 NONE
HER31_RS02295  484796 ..  484823 +    -7   -2.9058   TTAAATGGGGAGAAT        TCTATGGATGCA TCAA TGCACCCAGAGA         CTTGTGTTATTCATG  56 145
HER31_RS02300 NONE
HER31_RS02305 NONE
HER31_RS02310  487191 ..  487209 +  -6.7  -4.84274   TGAAAAGTGTGATGG             TGTCGAC GAAAA GTCGGCA             TTTTTGATCTAGTTA  80 87
        tyrR  488928 ..  488949 +  -4.5  -4.45738   CATACCCTCTCAAGG           TAATGTGAT TCAA GTCACATTG            TTTATTGTTCGAGTG  69 97
        hppD  490080 ..  490098 +  -5.3  -2.65808   GATTGAAGAGGATCA            GATC-CGC CGTG GCGTGATC             TAGCTTGTTGCGAGT  48 4
HER31_RS02325 NONE
        maiA  491764 ..  491789 + -13.4  -3.13177   AGTATAGGCACACAA         TAAGGGCAGC CTAGTA GCTGCCCTTA          TTACATCTGCGGTGT  91 34
        gltX NONE
HER31_RS02355  496030 ..  496048 + -12.4  -4.52857   AAGTTTTTAATAAGA             GGCCGCTT ATT GAGCGGCC             TTTTATATCCGGGGT 100 40
HER31_RS02360  496128 ..  496138 +  -2.4  -4.33182   GGTTCGAATCCCCTA                 GGGG ACG CCAC                 TTATTTTGTGGCTCA  59 16
HER31_RS02365 NONE
HER31_RS02370  496403 ..  496413 +  -2.4  -4.63928   GGTTCGAATCCCCTA                 GGGG ACG CCAC                 TTTTTCAAATGATGT  64 16
HER31_RS02375 NONE
HER31_RS02380  496626 ..  496636 +  -2.4  -4.63928   GGTTCGAATCCCCTA                 GGGG ACG CCAC                 TTTTTCAAATGATGT  64 16
HER31_RS02385 NONE
HER31_RS02390  496849 ..  496859 +  -2.4  -4.63928   GGTTCGAATCCCCTA                 GGGG ACG CCAC                 TTTTTCAAATGATGT  64 16
HER31_RS02395 NONE
HER31_RS02400  497072 ..  497082 +  -2.4  -4.33182   GGTTCGAATCCCCTA                 GGGG ACG CCAC                 TTATTTTGTGGCTCA  59 16
HER31_RS02405 NONE
HER31_RS02410 NONE
HER31_RS02415  497418 ..  497428 +  -2.4  -5.06451   GGTTCGAATCCCCTA                 GGGG ACG CCAC                 TTTTTTCAAATGATG  71 16
HER31_RS02420 NONE
HER31_RS02425  497642 ..  497652 +  -2.4  -4.63928   GGTTCGAATCCCCTA                 GGGG ACG CCAC                 TTTTTCAAATGATGT  64 16
HER31_RS02430 NONE
HER31_RS02435  497865 ..  497875 +  -2.4  -4.33182   GGTTCGAATCCCCTA                 GGGG ACG CCAC                 TTATTTTGTGGCTCA  59 16
HER31_RS02440 NONE
HER31_RS02445 NONE
HER31_RS02450  498211 ..  498221 +  -2.4  -4.63928   GGTTCGAATCCCCTA                 GGGG ACG CCAC                 TTTTTCAAATGATGT  64 16
HER31_RS02455 NONE
HER31_RS02460  498553 ..  498568 +  -6.1  -5.76633   ACGCTGACACCTAAA              CCACC TTTACT GGTGG               TTTTTTTGTGTCTGC 100 135
HER31_RS02470 NONE
HER31_RS02475  503132 ..  503144 +  -4.7  -3.35046   TCCAGCTCATCATCT                GGCTG CCG CTGCC                TATTTGACCACCTCC  52 368
HER31_RS02490 NONE
HER31_RS02495  506384 ..  506397 +  -5.3  -3.61178   TATTGTTGGCTTCAT               CAGAA GAGT TTCTG                TTTCAGCTGAATGAG  57 284
         ggt  508753 ..  508767 +    -5  -2.61912   CTTCCCTGACCAACT               GTTGTC CTC GATAAC               CTTCTAACTGGATCA  47 152
HER31_RS02515 NONE
HER31_RS02520 NONE
HER31_RS02525 NONE
HER31_RS02530  511831 ..  511847 +  -9.4  -4.72497   ACAGCCATAAAAAAA              CCGGAC ATTAA GTCCGG              TTTTGTTGATGCGTA  91 376
HER31_RS02545  515992 ..  516015 + -13.1  -3.60925   CCGTGCTGCCCCCGA          CGCCGCCCC TTTCAT GGGGCGGTG           TTCATATTTTTAGCG 100 46
HER31_RS02560  520092 ..  520103 +  -4.4  -4.09243   CCTCGTAAAACGCGC                TAGC GGAA GCTA                 TTTTGAAAAAATGTG  61 173
HER31_RS02565 NONE
        panF  522012 ..  522031 + -12.2   -5.1861   TACAGATACAAAAAA            GGCTAACC CTAG GGTTAGCC             TTTTTTAGTGGTACG 100 67
HER31_RS02635 NONE
HER31_RS02640  535969 ..  535994 +  -2.5  -5.52384   AAGGCACTGACAACG         GGCGTCAGTAT CTAT ATAATGGCGCG          TTTTTTTAATGGCGA  83 39
HER31_RS02645 NONE
        scpB NONE
        rluB  538309 ..  538333 + -21.5  -4.65446   ACGCTGTAGATACCA          CAGGGGAGCCC ATT GGGCTCCCCTG          TTTTATATGTGTGCT 100 46
HER31_RS02670  542389 ..  542406 + -14.1  -5.20216   TTACCTTTGATTGAA             GCCCGGC GTTT GCCGGGC              TTTTTTGATCCTATA 100 60
        sohB  543847 ..  543874 +   -20  -5.37043   ATTGCTAAAACAAAA        GAGGCCAAGCAG TTAT CTGCTTGGCCTC         TTTTTTATCTCAACT 100 398
        topA  550072 ..  550091 +   -15  -5.27335   TTAGCTCTGATTAAA            CAGCCCGC ATCT GCGGGCTG             TTTTTGTTTGGGGGC 100 59
        cysB  552604 ..  552624 + -14.7  -4.36903   AACAATGTTAACCGC            GAGGCCGCC TTT GGCGGTCTC            TTTGTATTTACTGCG 100 81
HER31_RS02710  554792 ..  554815 +  -3.2  -3.55474   CAATTACCAATGATG          CAATATGATG TTTG TATCGTGTTG           ATTTTATTGTTACTT  50 85
HER31_RS02715  555652 ..  555663 +  -4.4  -3.73953   TAAGGCGCCACGACC                GATC ATCA GATC                 TTTGCTGCCAGTAAT  56 311
HER31_RS02725  557077 ..  557094 +  -9.1  -3.97308   TTAATAAGCCAACAA             GGCTGGC CTCG GTCAGCC              TTTGCTATATTTAGG  79 125
HER31_RS02730 NONE
HER31_RS02735  559079 ..  559106 + -11.4  -5.56673   CAATACGGTTGATAA        GTCCAGATTGTA AATT TACAAGCTGGAC         TTTTTTATTGTGGCT 100 401
         apt  559718 ..  559735 + -12.7  -5.04601   CAACCTCATTCTAAA             GCCGAGC ACAT GCTCGGC              TTTTTGCTTTCTGAA 100 49
        dnaX  562329 ..  562360 +  -5.9  -2.53263   CATCTACATCTTGTC      CGGAGGCACG-GTT CAGGT AACATGTGCCTCCA      TCAATTGAACATCGC  49 58
HER31_RS02750 NONE
        recR  563327 ..  563370 + -12.8  -3.94812   CGGCTGTTTAATGGC TCTCAATAAAAACGCAGTTA TTTC TAACTGCGTTTTTATTTAAA TGTTTTTCAATCCAA 100 30
HER31_RS02760  567098 ..  567124 +  -9.4  -4.58685   TTAGAATACAAAAAA         GGCTTGAAACTC TAA GAGAATCAAGCC         TTTTTCCAAACGTTT  89 224
HER31_RS02775 NONE
HER31_RS02780  568936 ..  568952 + -12.3  -5.22006   GACGAAAATAGAAAA              GCCGACA TAA TGTCGGC              TTTTTGTTGTGCTGA 100 48
HER31_RS02800  573790 ..  573809 +  -5.6  -3.16668   TGTTGGCCACTCTAC            CGGGGTGG AGAA CCGCTTCG             TTCATGGCGGTATTA  51 462
        grpE  574930 ..  574945 + -10.4  -5.77988   TGTAAGACTGAAAAA              CCGAGC CTAG GCTCGG               TTTTTTTGTATCTGT 100 52
HER31_RS02825  577656 ..  577682 +    -8  -4.45765   GTTTAATTGGTTGGT         GCTGGTGCAT TAGTTCT ACGCACCAGC         TTTATTACTTTTGGG  82 182
        dnaK  580774 ..  580801 + -20.6  -4.33907   TAAATAGCTATTTGA        GCGGGCGTCCGG TAAA CCGGATGCCCGC         TTTTCCATATTTATC 100 67
        dnaJ  582009 ..  582030 + -15.9  -4.87665   CCGCTCAAACTAAAA           CGGCCACTC AATT GAGTGGCCG            TTTTTATAGGTACCG 100 49
HER31_RS02850  584572 ..  584601 +    -5  -3.17075   CTAAACCACGAGAAC       TGGCAGCAAC TTAGCGGAGC GATGCTGCCA        TTCCCTTGGGAAACA  52 45
HER31_RS02855  585552 ..  585566 +  -7.1  -2.64962   ATAATCATTGGCTTG               GCGCT GGGTA AGCGC               GTTGGTTGGTGGTAT  57 37
HER31_RS02860  586254 ..  586271 + -11.3   -5.4505   ATCAGTAAAAACAAA             GGGAAGC TTCG GCTTCCC              TTTTTTGTTGCCGCA 100 47
        dapB  587225 ..  587255 + -15.7  -3.41125   TCGAGAATAGTTAAA       TAAAAAAGCACGC AATTA GCGTGCTTTTTTA       TTGTGAATATATAGG 100 27
        carA NONE
        carB  591815 ..  591839 + -11.4  -4.35926   GTTGCTTAAACAGAA         CGCCGGATGGG ATGA CCCG-CCGGCG          TTTTGCGTTTACAAT  93 65
        greA  592453 ..  592467 + -11.4  -5.96894   AAATATAAAAAGAAA               GCTGCC AAG GGCAGC               TTTTTTTATTTGCCT 100 48
HER31_RS02885  593568 ..  593589 + -15.9  -5.06414   AAGCGCAACAAAAAA           GGGAGAGGC ATAA GCCTCTCCC            TTTTTGTTCCAGCAG 100 39
        rlmE NONE
        ftsH  596671 ..  596688 + -14.1  -5.36441   TTCGCTCGTTAAAAG             GCCCCGC CATC GCGGGGC              TTTTTTGTATAAGAA 100 49
        folP  597549 ..  597564 +    -4  -4.84017   GTTATGGTAACTAAA              GCG-TCA AAT TGAACGC              TTTTTATCAAAAATT  71 27
HER31_RS02910 NONE
        secG NONE
HER31_RS02920 NONE
HER31_RS02925  599318 ..  599336 + -10.3   -5.5208   ATAGCTAACTTTAAG             CCCCGTT TTAAC AACGGGG             TTTTTTGTATTCTGG 100 302
        rimP NONE
        nusA NONE
        infB  604167 ..  604180 +  -9.5  -5.52384   AGCGATTAAGGAAGA               GGGGC TACG GCCCC                TTTTTTTGGTGAAAA 100 44
        rbfA NONE
        truB  605594 ..  605629 + -11.2  -3.73402   AGTGGGTACAATCCG    CCGCCTTGAGCTGA GTTAGTGA TCGGCTCAAGGCGA     TTTAATACCAAGTGT  91 54
        rpsO  605965 ..  605998 + -14.7  -4.57569   AAGTCGTGCCAAGTT     TGCAAAAAGGGAGCC TTAC GGCTCCCTTTTTTCG      TTTTTGGACGGCTGG 100 39
         pnp  608321 ..  608341 + -18.3  -5.60993   CTTTTAATAACCAAA            CGGCCGCTC ATT GAGCGGCCG            TTTTTTTATGGGACA 100 69
        nlpI NONE
HER31_RS02975  611502 ..  611512 +  -5.4  -2.74696   TTACCCGTTACCGTA                 GAGT AAT ACTC                 ATGTTTGGTTCATTG  50 20
        nagA  612786 ..  612809 +  -3.1  -4.24204   CACGGGTTGAAGCAG          TTAGCGCCG GTTCTA CGGCATTAA           TTTTCACTCTCGATG  60 144
        prfC  614569 ..  614588 + -11.4  -5.07275   GGCATTTTCGATAAA            CGGGTAGC TGCG GCTGCCCG             TTTTTGTATCTATCA 100 55
HER31_RS02990 NONE
HER31_RS02995  615771 ..  615782 +    -3  -3.48807   CAGAGGATATAGGGT                CAAT GAAT ATTG                 TTATGAGTTTAGTGG  48 277
HER31_RS03000  617044 ..  617062 +  -9.5  -5.24799   TCAAAACTCGAAAAA             CGGTCGC CAAGT GCGGCCG             TTTTTGTGTTTATGG 100 55
HER31_RS03005  618782 ..  618806 + -17.9   -4.4768   TAGCTTAAGAATTAA          GCCCCGATGCC TTT GGTATCGGGGC          TTTGTTGTATTCATA 100 48
        deoC  619905 ..  619918 +  -8.1  -3.26649   GATTAATGCAATGAA               GCGAC GCCA GTCGC                TTCCTATCAGCATGT  64 57
        deoA NONE
HER31_RS03020  622476 ..  622489 +  -2.4   -4.9138   GGCTTGGCACCGCTG               GACT ACGGCA AGTC                TTTTCTTTAACTCAT  69 2
        deoD  623270 ..  623292 + -14.1  -5.75478   CCAATGAAGTAATGA           CGGGCGGCC AATTA GGCTGCCCG           TTTTTTTATCTGCTT 100 67
        serB  625417 ..  625427 +  -2.4  -3.90112   TCACATCCAGCAGCA                 TGGC ACA GCCC                 TTTAATTGCCACAGC  53 102
        radA NONE
HER31_RS03050  629969 ..  629992 + -11.8  -4.90455   TTATAATAAATCCCA          TGCCCACAAT TGCG GTTGTGGGCA           TTTTTATGGCTGTGT 100 35
HER31_RS03055  631098 ..  631128 +  -2.5  -4.64676   ATAGCATTGGCTAAA       CTACAGCTCCGGT AATTC GCTATAGCTGTAG       TTTTGTTGCAAGTGC  65 27
HER31_RS03065  635932 ..  635949 +  -2.7  -2.58579   GCGACTTTTTATTAG             TGAATAC TCGG GAATTCA              ATTATGCCAGATTCG  40 126
HER31_RS03070 NONE
HER31_RS03075 NONE
HER31_RS03080 NONE
HER31_RS03085  640718 ..  640732 +  -2.8  -2.72144   TTGCTGCGGTTAAGC               GGTC TAGCAGC GACC               ATTTGCAACAGCTCG  41 66
HER31_RS03090  642018 ..  642035 +  -4.7  -4.02334   AGTGACCTTAGAACG             CCGTGCT GATT GGCTCGG              TTTCTGATCTCGATA  61 1
HER31_RS03095 NONE
HER31_RS03100  644226 ..  644246 +  -6.8     -6.13   GTATGTCCCTTGGTA            GCCGGC TTACTCCTT GCCGGC            TTTTTTTTTGGCTGT 100 74
        ubiF NONE
HER31_RS03140  654554 ..  654573 +  -2.2  -3.66874   GTTGCAACCGGCCCC            CAA-AGCCT CGT AGGTTATTG            TTTAGCTAAGATTAG  49 13
HER31_RS03145  659365 ..  659396 +  -4.4  -4.50159   GAGTTAGCGAGCAAT      TAGCAGGGCAAC CTATTTGA GCTACCCTGCTA       TTTGTTTAACTTAAC  69 40
HER31_RS03170  664015 ..  664032 +  -3.4  -4.20918   TGGTCTATTGATAGT             CGTGGCA CTGGC TGCC-CG             TTTGTTGAGCTTGCC  60 60
HER31_RS03175 NONE
HER31_RS03180  665816 ..  665856 +  -2.6  -2.65264   GTCGCGGCAACTCAG TTGCACTGGCGCTTGCAGGC GCC GCCT-CAA-CGTTCGCGCAA TAGTATCAATCATCA  40 72
HER31_RS03210  673306 ..  673321 +  -6.8  -5.83822   CCCTGCTAAGTAAAA              CGTCAC TGCT GTGGCG               TTTTTTTTGGCTGTG 100 58
HER31_RS03215  674529 ..  674545 +  -6.5  -4.32436   GCTCGGCCTCTTCAA              CAACGAC ACT GCCGTTG              TTTTGGTACTGCTCT  74 464
HER31_RS03235 NONE
        lolD NONE
HER31_RS03245 NONE
HER31_RS03250  682740 ..  682764 + -16.5  -3.71848   ACACGAGAATCGAAA          CTACGGCAGCC TTG GGTTGCCGTAG          TTGTTGGTAGCGGCG 100 66
HER31_RS03255  683427 ..  683447 +    -9   -5.1383   ACACAGCCTAAAAAA            TGGCAGCT CTAGT GGCTGCCA            TTTTTATATCTTGTT  93 311
HER31_RS03265 NONE
        msbA NONE
HER31_RS03275 NONE
HER31_RS03280 NONE
        kdsB  689979 ..  689997 + -10.3  -4.78107   AAGTAACAATAAAAA             GAGCACC GCTAA GGTGCTC             TTTTTGATCCTAGTG  91 46
        sdhC NONE
        sdhD NONE
        sdhA NONE
HER31_RS03335  703921 ..  703951 + -11.3  -4.31688   GGTTGAGAAACATAA      GGCCACGT-TTTCA GCAA TGAAGGACGTGGCC       TTTTAGGTTCATGTT  93 62
        sucA NONE
        odhB  708031 ..  708053 + -19.2  -3.65313   GGACATCTGATCTAC           CTGGGGCAGC ATC GCTGCCCCAG           TTTCAACTCTGATTC 100 31
        sucC NONE
        sucD  710190 ..  710209 + -10.7  -4.90266   CGTAACACTCGTTAA            GCCCACC TATTTT GGTGGGC             TTTTTGCTTCCTAAG 100 66
HER31_RS03360  711145 ..  711163 +  -6.7  -5.54885   TTCACTTTATAAAAA             GGCATCA TTTAT TGGTGCC             TTTTTTATTGATGTT 100 60
HER31_RS03365  713180 ..  713202 +  -6.2  -4.33274   CCCTCCTTATACCTA           TTTGGCGCTG TAG TAGCGCCGCA           TTTTCCTCGTCTGGA  73 67
HER31_RS03370 NONE
HER31_RS03375  714883 ..  714903 + -10.4  -4.24948   AGGATGAAGACACGA            GGCCGAGC TTACT GCTCGGTC            TTTTGCATCTAATCA  85 71
HER31_RS03380  716925 ..  716946 +  -6.6  -3.95647   CAGGCAAATCAGACA           GGATAGCC AGAATC GGTTATCC            TTATTGATTATTTTA  68 116
HER31_RS03385  717486 ..  717509 + -16.8  -5.66684   AATCGATTTGACTAA          CGCCAAACGG GCAA CCGTTTGGCG           TTTTTTTATGGCTTA 100 53
HER31_RS03395  719383 ..  719404 +  -6.5   -4.4078   CACCGCCCCAAAAAA           CGCGGTGACC TAA GG-CGCCGTG           TTTTAATTCAGGAAA  73 386
HER31_RS03405  720659 ..  720671 +  -5.5  -3.19371   TAAGAACCCGTTTGT                TGCCG ATT CGGTA                TTGGGTTAAGTCGCT  54 4
HER31_RS03410  721397 ..  721408 +  -3.6  -4.65895   TTGCTCGTTTTGCCA                CTCC AATC GGGG                 TTTTTCCGTGCACGC  68 245
HER31_RS03440 NONE
        feoB  733287 ..  733304 + -12.7  -4.84527   GTTCCGCACTAAAAA             GGCAGCC AGTT GGCTGCC              TTTTTGCTATCTAGA 100 50
HER31_RS03450  734046 ..  734076 + -16.2  -3.29511   GCCACCCCTCAAAAG       CCTCTCTGCAGTGG TTG CCACTGCGGAGAAG       TTGTCGCAAAATACC 100 61
        glnS  735826 ..  735845 + -11.4  -5.63517   TAGCTGGAACGAAAA            CCGACGCT CTTA GGCGTCGG             TTTTTTGTTTAGGGA 100 56
        cobB  738854 ..  738866 +  -5.5  -3.14132   AGCTTATTCTCGATG                GTCAG CTA CTGGC                TTGATAAACCGAGGG  54 9
        bioB NONE
HER31_RS03485 NONE
HER31_RS03490 NONE
        bioD  743844 ..  743867 +  -2.4  -3.01329   GAATAGGAAGCCGGG          TTTATGGCCT TGTA AGGTCATACG           ATTGTTGTTGATTAG  41 97
        htpX  745527 ..  745546 +   -15  -4.61873   TGCGGCAACGAACAA            CGGCGACC TTAG GGTCGCCG             TTTTGCTTTGTCGGG 100 45
HER31_RS03510 NONE
HER31_RS03515  746497 ..  746516 + -11.4  -5.12068   ATTGCTTAATCTAAA            GCGTCAGC CTCG GCTGGCGC             TTTTTGTTGACTCTG 100 58
        queE  747708 ..  747721 +  -6.7  -3.17725   AATACTTCGCTGGTT               GGGTT CTCT AACCC                TTCGATGTCATTTAA  56 194
HER31_RS03530 NONE
HER31_RS03535  749252 ..  749265 +  -3.9  -3.09785   GGATCGGATTAAGCC               TCAAT AGCA ATTGA                TATGTTGCACTGTGC  47 19
HER31_RS03540  749826 ..  749845 + -13.6   -4.7254   GTGAATTATCAAAAA            CGGCCACA TTAC TGTGGCCG             TTTTTAGTAAAGGGT 100 44
HER31_RS03550  752133 ..  752162 + -13.7  -3.37259   CTGAACTGTAGATAT       AAAAACGGCCACT CAAG AGTGGCCGTTTTC        TATTTAGCACTGATT 100 68
        rluC NONE
HER31_RS03565  757761 ..  757776 +  -4.7  -2.94412   CAGCTTCGCCTCAAG              TTGGC CGGTCA GCCAA               TCCTTTAGCATTACC  47 75
        yceD NONE
        rpmF  759827 ..  759868 +  -8.1  -2.62983   GACGGTTTCTACCGT GGCAAGAAGGTAATCAACCT GTA AGGTTGCT-ACCATCTTGAC TAGTCTAACCCTAGC  59 2
        plsX NONE
HER31_RS03595 NONE
        fabD  762781 ..  762794 +  -2.3  -3.33696   AATACTACAGCGGAT               CTGTC GACA GTCAG                TTAATTGGGGAGAAA  45 8
        fabG  763603 ..  763626 +  -3.2  -2.71712   TTCGCTTCGAACTAA          CGTGAATTTG TAAC TAAATTCGTG           GTTTGACCACCAAGC  43 68
        acpP  763981 ..  764002 + -12.3  -5.95539   GATAAATTTTTAAAA           CAGGCGGCT TAAC AGTCGCCTG            TTTTTTTATTTGCGG 100 49
        fabF  765279 ..  765309 + -14.9  -3.40134   AAGCGCTTAAGTAAA      G-AAAAAGGCGCCC TTCG GGGCGCCTTTTTGC       TATTTGACGTAATTT 100 40
HER31_RS03620  766306 ..  766327 + -13.7  -4.66537   ATCGACATACAAAAA           CGCCACCGT AATT GCGGTGGCG            TTTTCTGTTAGGCGG 100 62
HER31_RS03635  770704 ..  770719 +  -7.5  -4.64861   AATAAAGAATTGAAA              GCGGC CTCGGA GCCGC               TTTATTTTGGCCGGC  82 57
        msrP  777724 ..  777735 +  -2.2  -3.08996   TATGAAGGAATGGAT                CTAC GTCA GTGG                 TATTAACTAAGCATA  42 8
        msrQ  778358 ..  778372 +  -2.8  -2.77888   AAAATAATGCTAACA               GGTTAT AAT ATGGCC               ACTTTTTGTCTATTC  41 34
HER31_RS03670  780211 ..  780229 +   -16   -4.2408   TTGCTAAGTGTTCAA             GCGGCGCA TTT TGCGCCGC             TTTGTCGTTTTATGG 100 57
HER31_RS03675  780946 ..  780966 + -12.6  -3.68024   ACACAGCCCAAAAAA            GGATCGGC TCAAT GCCGATCC            TTCTCTATTCCACAC  95 249
HER31_RS03685  782892 ..  782904 +  -4.8  -3.71672   CTTAGTTGGTACACA                GCCA ATGAA TGGC                TTCATTTTGCTGCAG  59 391
HER31_RS03690  783733 ..  783768 +   -17  -4.89521   CGTGATCACAATAGA    CAAACCCCTTATTGGC ATAT GCCAGTATGGGGTTTG     TTTTATTTAGCATAT 100 103
HER31_RS03695 NONE
HER31_RS03700  784551 ..  784563 +  -4.8  -2.79749   TTAAGTCAATCTTGG                TGCC GCTCG GGCA                ATTATCTTCGCGCTA  49 37
HER31_RS03745 NONE
HER31_RS03750  795433 ..  795454 + -10.2  -3.97139   GTGAGCAATAGCAAA           CGGCAACT CAGGTT AGTTGCCG            TTGTTATTCCCGTTA  82 52
HER31_RS03770 NONE
HER31_RS03775 NONE
HER31_RS03780  801071 ..  801101 + -12.6  -3.85254   TTTTAAGAAAGCGCT       GTAACGGACCTTGG TCG CAAAGGTCCGTTTC       TATTTTATGATACTG 100 154
        rplY  801438 ..  801455 + -12.7   -4.8048   CCTTACGGCAGAAAA             GGCACCC TTCG GGGTGCC              TTTTTCGTATGGGGC 100 48
HER31_RS03805 NONE
HER31_RS03810  809821 ..  809854 + -14.7  -5.08601   CATTGGTAAAACAAG     GCGCAACCTGATTTA TCGC TGAATCTGGTTGCGC      TTTTTATTAGAATCA 100 54
        cysE  810719 ..  810735 + -12.3  -5.20216   TTTAAAGGATAAAAA              GAGCGCA ATA TGCGCTC              TTTTTTAATGCTGTG 100 59
HER31_RS03825  812846 ..  812858 +  -2.7  -3.74158   CAAGCGCTTGGTCAA                TTGGT CTG ACTAA                TTTAGATCTCCTTCA  52 205
HER31_RS03830  814606 ..  814626 + -18.3   -5.4659   AGCAACCAAAGAGAA            GGGCGTGCC ATT GGCACGCCC            TTTTTGTTTGTCTTA 100 56
HER31_RS03845  817027 ..  817052 + -14.9  -3.14053   ACAACACTCAAACAA         TTAATGCGCCA TTAT TGGCGCATTAA          TATTACCTGCTTTGG  95 56
HER31_RS03855  819116 ..  819131 + -10.4  -5.28778   CCGTTGTCACAAAAA              GGAGGC TTAT GCCTCC               TTTTTTGTGCCTGCT 100 48
HER31_RS03860  821424 ..  821442 + -14.6  -4.70659   TGCGGCAATGAAAAA             GGCGAACC TTT GGTTCGCC             TTTTTGCATCTAAGC 100 46
HER31_RS03870  823102 ..  823128 +  -8.7  -4.41494   TCGGTAAGACAACAA        TCCCCACACAGC CTGC GCCG-GTGGGGA         TTTTAGTTGAGACTG  84 47
HER31_RS03945  838759 ..  838770 +  -2.2  -3.46824   CCGATAAGCAGCAGT                CCAT CGCC GTGG                 TTAATTCCTTGGTCG  46 464
HER31_RS03955 NONE
        pdxH  840843 ..  840858 + -10.4  -4.93696   GTGCTTCTACCTAAA              CGCAGC TGTG GCTGCG               TTTTTGCTATTTAAC  93 54
HER31_RS03965 NONE
         can  843936 ..  843960 + -17.2  -4.28651   ATAGCGCAGGAAAAA          GGGCGAGAGG GAATA CCTCTCGCCC          TTTTAAAATTTTGGT 100 58
        hinT NONE
HER31_RS03990 NONE
HER31_RS03995 NONE
HER31_RS04000  848023 ..  848044 +  -5.9  -3.14132   CCTCATGGAAGATAG           TTAGGT-GCG GGC CGCCACCTAG           TTAATCGGAGCAAAA  54 159
HER31_RS04005  848260 ..  848277 +  -9.8  -4.42974   CACGGTCAAGACCAA             CCCCGC TGATAT GCGGGG              TTTGTTGTATCTAAA  86 65
HER31_RS04010 NONE
HER31_RS04015  850957 ..  850978 + -14.5  -2.79133   TGAGTGATTGGTTAA           GCGGCATCT TGGC AGATGCCGC            TATCATGACCGGTTG  87 34
HER31_RS04020 NONE
HER31_RS04025 NONE
HER31_RS04030  853259 ..  853290 +  -2.4  -3.76952   ATATCTGCAACGGGC      GCAATAAAACCGA CAGCGGC TCGGTCT-ATTGC      TTTAAGTTGAGTACA  51 19
HER31_RS04035  853930 ..  853941 +  -3.6  -2.90685   CTCAGATTAGTCATG                GCCG AAAT TGGC                 TAGTTGATTTGAATT  44 48
HER31_RS04040 NONE
HER31_RS04045 NONE
HER31_RS04050  856808 ..  856827 +  -8.6  -2.60212   TCGGCGCGGCTTAGG            TTATCGGG AAAG CCCGGTAA             GTTGTCGAGTAGTAC  58 369
HER31_RS04060 NONE
HER31_RS04065  859265 ..  859308 + -23.4  -2.70215   TCCCTGACCGCCATA TAAACAACAACGCCCCGCAC GAAA GTGCGGGGCGTTTTTGTTTG GTTGTGTACCAATTT 100 28
HER31_RS04070  861082 ..  861096 +  -2.8  -3.53031   CTTCCGTACACAAGT               TCGTTA TAA TGACGG               TTCGTTTACCCTGAA  48 300
HER31_RS04075  861460 ..  861470 +  -3.2  -2.91681   CAGTTAGACCGAGTT                 GAGG TTG TCTC                 TCTATCAAATTGAAA  44 2
HER31_RS04080  862473 ..  862492 + -13.6  -4.88228   AGTTTTCGGGTAGAA            CTGGCTCC TGCG GGAGCCAG             TTTTTGCTGTTAGAT 100 43
        pstC NONE
        pstA NONE
HER31_RS04095  865074 ..  865089 + -11.8   -5.2189   GAGTTAACGTAAAAA              CGGCGC TGCG GCGCCG               TTTTTTGATCGTTAA 100 45
HER31_RS04100  865629 ..  865641 +  -2.7   -3.6692   AACCAAATTTTTCAT                TGGTT TCG AACTA                TCTTTTCCCCTACAG  50 139
HER31_RS04105  866354 ..  866372 + -13.8   -5.4833   CGATGGTTAAAAAAA             CCGGCGCT ATT GGCGCCGG             TTTTTTATTGCGTAG 100 48
HER31_RS04125  871520 ..  871551 + -15.3  -3.29511   GGTTAGCTGCTCAAA      C-AGTAAGGGCGCC TGTAT GGCGCCCTTACTCG      TTATAAGAAACTGGC 100 83
HER31_RS04145  875536 ..  875551 + -11.8  -4.18197   AGCAGACATGAAAAA              GGCCGC GTAA GCGGCC               TTTTCGATAAAGAGT  95 16
        seqA NONE
HER31_RS04175  879932 ..  879951 + -13.6  -5.55769   CGCAGCGTATACTAA            GGGAAGCC AAGT GGCTTCCC             TTTTTTCTTGTGCCA 100 46
        ylqF  880997 ..  881021 + -18.7  -4.06419   TCTTCAGTTAAATGC          CAAACCCGAGC TAA GCTCGGGTTTG          TTGTTTGTGGCAGCC 100 50
        astE  882869 ..  882881 +  -5.5  -2.87468   TGTGGCATTACTGTG                GCAGG TAA CTTGC                TCTGATGTCGTCAAC  51 122
HER31_RS04195 NONE
HER31_RS04200 NONE
HER31_RS04205  886707 ..  886721 + -12.8  -4.17048   CGATAACCCTAATAT               GGCGCC AAT GGCGCC               TTATTTTCGCGACAG 100 35
        nadA  887945 ..  887962 + -11.3  -5.29782   ACTTACCCTTATTAA             GCACCGT AATC ACGGTGC              TTTTTTGTGGCTGTG 100 49
HER31_RS04215 NONE
HER31_RS04220  889253 ..  889296 + -23.4  -2.69947   TCCCTGACCGCCATA TAAACAACAACGCCCCGCAC GAAA GTGCGGGGCGTTTTTGTTTG GTTGTGTACCAATTA 100 28
        yejK  898611 ..  898640 + -10.1  -3.06694   CATTAAAAGGTGTGA       TGCCGATCACT AAAGGCGC AGTGGTCGGCA        CTTTTAAAACTAAAT  73 97
HER31_RS04265  900146 ..  900171 + -17.7   -3.6164   AGCGCCAGAGCGAAC         CAAAGCCGAGC TTAT GCTCGGCTTTG          TTGTATCTGCATGTT 100 43
HER31_RS04270 NONE
HER31_RS04275 NONE
HER31_RS04280  901825 ..  901854 + -18.1  -3.36452   TTGAGCTTATAAAAT       CAAAAAACCAGCC TTAC GGCTGGTTTTTTG        TTGATATTGAGGAGT 100 41
HER31_RS04300  906384 ..  906399 +    -9  -3.02043   TACTCGTGTGAGGGA              GTGAGC TTCG GCTCAC               TCTTGGCCGAACGTT  68 41
HER31_RS04315  909355 ..  909381 + -20.2  -5.07486   AGCAAGAGATAATAA         GCCCCTGCAGCC TTT GGTTGCAGGGGC         TTTTTGTTGGCGGTG 100 47
        imuA NONE
HER31_RS04325 NONE
HER31_RS04330  915679 ..  915694 +  -5.4  -4.00348   CCTTGATAGCCTTGA              GTTACG CTCT CGTGAC               TTTCATTGATTGCAG  63 1
HER31_RS04335  916789 ..  916821 +  -4.2  -4.21922   AGCCTTGGGCGTATT     CACAGTGAT-ACTGC TTAA GCAGTTGTAGCTGTG      TTTCATTTTCAATGC  63 108
HER31_RS04350 NONE
HER31_RS04355  920286 ..  920319 + -11.7  -2.91924   AGATCTTGAGTAATA     CGGCTGTGATCTTCG CGAA CGGAGATCCCAGCGG      CTTTATCGCCAATCA  76 123
HER31_RS04390 NONE
HER31_RS04395  926860 ..  926873 +  -5.3  -3.24924   TTTAATTGCATTGGC               TGAAG CCGA CTTCA                TCTTCTAGCTCGCAG  52 45
HER31_RS04410  929486 ..  929499 +  -4.5  -3.93984   TCTGAGCAAGAAACT               GGTCA CATA TGGCC                TTTATAACTAACTTT  59 5
HER31_RS04415 NONE
HER31_RS04420  930804 ..  930818 +  -8.6   -3.7795   GACGTTATCGACAGT               TTTGCC TAC GGCAAA               TTTGGTGCGATTTGA  70 258
HER31_RS04505 NONE
        hutX NONE
HER31_RS04515  950534 ..  950577 +  -3.7  -4.90013   GTTAAAGTCTCCCAA TATCTGTGCCGCTTCGAAT CCTAAC AATCGCAGCGGCACTGCCA TTTTTGCTTCAGTTC  74 36
HER31_RS04520 NONE
HER31_RS04525  953867 ..  953898 + -18.8  -3.62224   CACAGCCGAATAAAA      TGGCCACGCTACCG AATA CGTTAGCGTGGCCA       TTATTAAGGCGGTAT 100 411
HER31_RS04555  958474 ..  958502 +  -4.7   -2.9313   CGAATTAGCCACATG       GATGTTG-CAGT TACCTT GCTGACAACATC        GTTCTTCATTTGCAA  48 135
HER31_RS04580 NONE
        hyfB NONE
HER31_RS04590 NONE
HER31_RS04595 NONE
        hyfE NONE
HER31_RS04605 NONE
HER31_RS04610  973435 ..  973448 +  -2.4  -2.94411   CACTGAAATAAGGAG               TCGA TGATGT TCGA                GTTATTTAAGACCAT  41 30
HER31_RS04615 NONE
HER31_RS04620 NONE
HER31_RS04625 NONE
        hycI  975715 ..  975741 +  -3.7  -3.54424   GCGTCGTCGAGGCCG         TCGACATTACT GACGG AGCGGTGTCGA         TTTGCACCGCTAACC  52 41
HER31_RS04635 NONE
        fdhF  978639 ..  978672 + -18.3   -4.1552   AAGCTAAGTAGGTAA     TAAATGGCACCGGGC CTCC GACCGGTGCCATTTA      TTTATTAACAAAATA 100 34
HER31_RS04645 NONE
        fdhD  981974 ..  981987 +  -6.7  -5.34555   TGTCGTCTAAATAAT               CGACA TTAG TGTCG                TTTTTTATGCTGTAA  91 144
        focA  983085 ..  983108 + -16.8  -5.34365   AAGTTGAATGTTATT          TACTGGCGCC ATAT GGCGCCAGTA           TTTTTATTGTTATAA 100 47
HER31_RS04660  983307 ..  983322 +  -3.2   -3.6944   TCTTCCGCCAACTCT              TCGCTC ATTC GAGCCA               TCTTTATGTTCAGGA  51 31
        selA NONE
HER31_RS04670  986505 ..  986537 +  -6.4  -3.52539   TCATGGCAACAACAT     TAACGCGAGGCTGAA TCAC TTCAGCCG-GTGTTA      TTCTACTTCGAGTTC  60 23
HER31_RS04685  988857 ..  988871 +  -6.4  -3.53722   CTCAGTGTAAGTCTC               GGGGTT AAC AACCTC               TTCTATAGCTGTGAC  59 475
HER31_RS04710  995281 ..  995295 +  -3.5  -3.05384   AGCGAGCCAACAAGG               GTGGT TTACC GCCAC               TTAAATAAAAAAAAG  45 7
HER31_RS04715  997124 ..  997144 + -16.9  -5.84432   TCATCAGTGCTCTTA            CTGGGAGCC ATT GGCTCCCAG            TTTTTTTGTCTTATC 100 43
HER31_RS04720  998037 ..  998055 + -10.2  -2.90992   CTTGTTAATGCGGTT             GCTACCGC TTA GCGGAAGC             TAATTTGGCGCAATT  72 209
HER31_RS04725  999015 ..  999027 +  -3.3  -3.68767   GATCGCCTCGCAACC                CCCAC TGA GTAGG                TTCATTTTCAAATAT  52 401
HER31_RS04760 1007864 .. 1007898 +  -8.1     -3.81   ATATCTCTCAAATGA     TTAATAAGGCTAGGC GTTTA GTTTAGTCTTATTAA     TTGTTATCAACTAAT  71 45
HER31_RS04765 1010246 .. 1010271 + -16.9  -4.31835   TTCTAACCATCATAA         GGCAGCTGGCC GCAA GGTCAGCTGCC          TTTGTTATGAGAGTT 100 35
HER31_RS04770 1011116 .. 1011126 +    -4  -2.55402   AGAGGTCACCCAAAG                 CAAT GCC ATTG                 GTTAATCCTCGTTTG  44 10
HER31_RS04775 NONE
        cobU NONE
HER31_RS04785 NONE
        cobU NONE
HER31_RS04795 NONE
HER31_RS04800 NONE
HER31_RS04805 NONE
HER31_RS04810 NONE
        cobS NONE
        cobO 1019898 .. 1019911 +  -5.2  -3.80855   TGAAAGCAAGATTGC               CGCC CGTAAA GGCG                TTGATTTTTAACCAC  59 1
HER31_RS04825 NONE
HER31_RS04830 1021898 .. 1021934 + -18.2  -3.74077   CCGCTCTAATACAAC    CAAAACGGGCGCTATC TTAAC GATAGCGCCCGTTTTA    TTTGGCTGTGTACCA 100 95
HER31_RS04840 1024964 .. 1024976 +  -6.9  -3.74526   CTAACACCGAGTAGC                GGCGG CTT TCGCC                TTGTTCAATTAATCG  66 139
HER31_RS04845 NONE
HER31_RS04850 1027095 .. 1027118 + -13.2  -2.78349   CATAACAAGCAAATC          CAGGTGACGCC TAC GGCG-CACCTG          ATTTGGGCGTTATTT  85 48
HER31_RS04855 1028262 .. 1028278 +  -9.3  -3.60475   TCTTGTGTGCATTAG              GGGGGAG CTT CGCCCCC              TTTGCAATCCCCCTT  75 172
HER31_RS04860 1029517 .. 1029533 +  -4.4  -2.93853   ATTTGGTGTTTAAAG              CTAACC AATAC GGTTGG              ATTTGATTCGCCCCC  48 3
HER31_RS04865 1031614 .. 1031635 + -14.5  -6.00086   GATAAACGGCAAAAA           CCAGAGCGA GTAA TCGCTCTGG            TTTTTTTTATGCTGT 100 64
HER31_RS04880 NONE
HER31_RS04885 1037472 .. 1037487 +  -3.2  -4.15998   GATCTCAGTCTCCGC              TGTCGC TTTG GCAACA               TTGTTTGCTTTGGCT  60 104
HER31_RS04890 1038386 .. 1038421 + -12.6  -3.30124   CTAAATCGTTTTAAG    CGCAACGGGCTGGAGCG TTG TGCTCCAGCCTC-TGCG    TTATGAGCAATACAC  90 27
HER31_RS04895 NONE
HER31_RS04900 NONE
HER31_RS04905 1041911 .. 1041932 + -10.9   -5.4505   TAGCAAAACGAAACT           GGGAATGGCC TGT GGCC-TTCCC           TTTTTTGTTGGGCGC 100 243
HER31_RS04920 1045561 .. 1045586 + -12.6  -3.41602   TCCTGTAACGAAAAT         GACGGGCACC AATCGC GGTGCCTGTC          TTGTCATAAAATACG  90 33
HER31_RS04925 NONE
HER31_RS04930 1048755 .. 1048779 + -14.3  -5.83822   CCCTGCTAGGGTAAA          GGCCACTTTCG TTT CGTAAGTGGCC          TTTTTTTTGACTGTG 100 70
HER31_RS04970 1060703 .. 1060722 +   -15  -4.66938   TAAAGTAATTATAAA            GCCCTCGC GATT GCGAGGGC             TTTTGTCTTAGCGCT 100 59
HER31_RS04995 1068963 .. 1068977 +  -4.2  -3.40403   ACACCAGCTAATGCT               TCAGCA ACT TGCCGA               TTGTAATAACACAGC  50 247
        cobD NONE
HER31_RS05005 1072283 .. 1072306 +  -8.1   -3.2056   TGGCGCTCTCTTAGG          CGCGGATCT ACCCTC AGTTCCGCG           TTAGTGGATATCAGT  64 436
HER31_RS05015 NONE
HER31_RS05020 NONE
        cbiE NONE
        cobI NONE
HER31_RS05035 NONE
HER31_RS05040 NONE
HER31_RS05045 NONE
        cobJ NONE
        cobM NONE
        cobA 1082805 .. 1082830 +  -9.7  -2.78032   CCTAAATTCAGTTTG         GCCCGTTGGTT AGAT AATCGGCGGGC          ATGTTTTAACCACAA  69 379
HER31_RS05065 NONE
HER31_RS05070 NONE
HER31_RS05075 NONE
HER31_RS05080 NONE
HER31_RS05085 1087881 .. 1087908 +  -9.8  -3.16534   CACGATTTAACCATT        TTTGGCGCGTTC GCTC GGACGCGCCACG         TTCGGTGTGATTGCT  72 46
HER31_RS05090 1089452 .. 1089468 +  -9.3  -3.66921   TCTTGTATGCATTAG              GGGGGAG CTT CGCCCCC              TTTGGAATTCCCCTT  75 155
        uvrB 1094959 .. 1094989 +   -12  -3.17075   GGCACACCGATTTTA       CGCTGGTGCTTA CATCGCC TAAGTACCAGCG       TTCGATTAAACAACG  83 52
HER31_RS05175 1095889 .. 1095899 +  -2.4  -3.02698   AACAGCCAACCTGAA                 CGCC ATT GGCA                 CTTTATGTCGAGTAA  42 187
HER31_RS05195 1098783 .. 1098798 +  -5.4  -3.06261   ACATTACCCTTAAGA              GTACTG CAAT CGGTAC               TCTTAAGAGTTGAGA  52 489
HER31_RS05225 1100492 .. 1100503 +    -3  -2.92936   GGTCACGGTCAAGAA                TAGT GGCA ACTA                 TATAATTCCCTGCTT  42 98
HER31_RS05230 NONE
HER31_RS05235 1103233 .. 1103249 +  -5.9  -2.62184   CTCAGCGGTATCTCC              TTGATGT ACT ACATCGA              TGATATCCAAGCGAC  50 210
        smrA 1105141 .. 1105157 +  -6.5   -3.6834   TAACAAAACCTATTT              TGCTGGG CTG TCCAGCG              TTTGGAGATTTTATT  62 376
        uvrY NONE
        uvrC 1107658 .. 1107669 +  -5.8  -3.03619   TCCATGATGCGTTGC                GCAG TTAG CTGC                 TATTGCGGCATGATT  52 18
        pgsA 1108419 .. 1108440 +  -5.2  -3.99957   GGCTCCAAAGCGAAA           GCAAAGGT TACAAT ATCTTTGC            TTTCTAAATGTTTAA  61 180
HER31_RS05270 NONE
HER31_RS05275 1108668 .. 1108679 +  -2.2  -3.62046   GACGATAAGACTTCG                GTGT TATC GCAC                 TTGTTGCCCGAGTGG  49 44
HER31_RS05280 1108768 .. 1108779 +  -5.8  -4.03413   GTCCGGCCTCGGGTA                CCAC TTTG GTGG                 TTTGTATGCGGCACT  65 23
HER31_RS05285 1108861 .. 1108872 +    -3  -3.51232   CCTCGTGTGCCGCTC                CAAA TTAG TTTG                 TTGGTTTCGACCCGC  48 24
HER31_RS05290 1108998 .. 1109009 +  -2.2  -3.62046   GACGATAAGACTTCG                GTGT TATC GCAC                 TTGTTGCCCGAGTGG  49 44
HER31_RS05295 1109098 .. 1109109 +  -5.8  -4.03413   GTCCGGCCTCGGGTA                CCAC TTTG GTGG                 TTTGTATGCGGCACT  65 23
HER31_RS05300 1109191 .. 1109202 +    -3  -3.51232   CCTCGTGTGCCGCTC                CAAA TTAG TTTG                 TTGGTTTCGACCCGC  48 24
HER31_RS05305 1109328 .. 1109339 +  -2.2  -3.62046   GACGGTAAGACTTCG                GTGT TATC GCAC                 TTGTTGCCCGAGTGG  49 44
HER31_RS05310 1109463 .. 1109478 +  -6.1  -5.76633   AGTTGGACAAAATAA              CCAGC CATTGT GCTGG               TTTTTTTGTATCTAA 100 58
HER31_RS05315 1110184 .. 1110208 +  -6.4  -2.79796   TCACATTTATCCGGT          TCGGTGTTGA TCACC TCACCACCGG          TGTAATCAGCTAACA  51 139
        nrfA 1112440 .. 1112456 +  -9.4   -5.1925   TGCCACGACTAAAAA              CCCAGC CTTGT GCTGGG              TTTTTTACATTGTAC 100 50
HER31_RS05350 1119111 .. 1119121 +  -5.4  -3.13432   TATCGTAGTTGCTCA                 GCTT GTT AAGC                 TTCACTCGTCTTCGA  54 17
HER31_RS05365 1122808 .. 1122835 + -18.6  -4.47707   GCTAAGCGCGCTAAC        CAAAGCACTGCC CGAT GGCAGTGCTTTG         TTGTTTTTGGTGCAA 100 52
HER31_RS05370 1125805 .. 1125836 +  -2.2  -4.27026   CTGGCAGTTTATATG      CGCCACTAATTTTG CTTT TAGAAAAGGTGGCG       TATTTTTATTTGGGC  57 58
        ybgC NONE
        tolQ NONE
        tolR NONE
        tolA NONE
        tolB NONE
         pal NONE
        ybgF NONE
HER31_RS05410 NONE
HER31_RS05415 NONE
HER31_RS05420 NONE
HER31_RS05425 NONE
HER31_RS05430 NONE
HER31_RS05435 NONE
HER31_RS05440 NONE
HER31_RS05445 NONE
HER31_RS05450 NONE
HER31_RS05455 NONE
HER31_RS05460 1132815 .. 1132829 +  -6.4  -2.80935   TATCAAAACTGCCAT               GTTGCT GAT AGCGAC               TGTCATCGCTAACGT  51 88
HER31_RS05505 NONE
HER31_RS05510 NONE
HER31_RS05515 NONE
HER31_RS05520 NONE
HER31_RS05525 1148651 .. 1148666 +  -4.6  -3.10409   GGATGGTAACTCATC              CGAACC AAAC GGGTCG               TTAGCTCAGTTGGTA  49 177
HER31_RS05530 1148779 .. 1148802 +    -6  -5.94597   CAACAATGAATAAAA          CCCACAAGCAT CTT ATGCG-GTGGG          TTTTTTTTCGTCTTG 100 68
HER31_RS05535 1149514 .. 1149538 +    -3  -4.79756   AGCCTTCCAATGATA         TGCAATGTGAT CATG GTCACATT-CA          TTTTTCACTTATCTG  68 234
HER31_RS05540 1150854 .. 1150872 + -14.6  -4.44667   TAGATTGTCGTAAAA             GCCAGAGC AAT GCTCTGGC             TTTATTGTTAGCGCG 100 50
HER31_RS05560 1155403 .. 1155430 + -22.8  -4.61868   ACCAGTTCACGGTAA        CGGGCCGGTCAG TTTT CTGACCGGCCCG         TTTTGTATGTCGCTA 100 55
HER31_RS05570 1157284 .. 1157309 +  -2.5  -3.08046   CGCGGTTGATCGTCT         GCTGCATTGGA GTAG TTCAACGAAGC          GTTTTGGACTGCGAC  43 142
HER31_RS05580 NONE
HER31_RS05585 1160995 .. 1161023 + -13.1  -3.74747   GAACCTTTACCGTTA        TTCCGTCGTGGCG AAA CGCCACGGTGGGG        TTTGATAGAGGTTCG  85 90
HER31_RS05600 1162621 .. 1162634 +  -9.5  -5.48303   ATAGATACAAAAAAA               CCCGC AGAT GCGGG                TTTTTTTAAGCTTGT 100 55
HER31_RS05620 1165699 .. 1165719 +  -4.7  -4.46581   CCTTTTGTGCTAGCA            CTTGCTG TTGCATC CAGCAGG            TTTTATGCGGTTTTA  68 84
HER31_RS05645 1174000 .. 1174022 +  -6.3  -4.34402   TCGGACCAGATAACG          GACGCTAAGC TGAC GCT-GGCGTC           TTTTGGTATGGCGGG  73 71
HER31_RS05660 1181563 .. 1181590 +  -6.2  -3.53298   ATCTCAATCTGTACC        TGTTGCATCCCC TTGA GTGGACGCAGCA         TTACTTTAAAATCCT  59 212
HER31_RS05675 1185571 .. 1185597 + -15.2  -4.07568   TAGCGCTCTATTAAA         GCCTCACCAAGC GAT GCTTGGTGAGTC         TTTTGCCCCAAAAAG 100 53
HER31_RS05680 NONE
HER31_RS05685 NONE
HER31_RS05690 1189318 .. 1189343 + -17.7  -4.87626   GCAGCACTGAATGAA         GGCCCCAACTA GCAA TAGTTGGGGCC          TTTTTGCTGTTCGAG 100 53
HER31_RS05700 1190470 .. 1190481 +    -3   -4.4078   AATGTTTTGCACTAA                TTAG AAGA CTAA                 TTTTAATTGAAAAAG  60 58
HER31_RS05705 1190873 .. 1190887 +   -10  -3.36492   TGAGGCAGATTAATG               GTGAGC TAT GCTCAC               TTATAAACTTAAACC  76 91
        ppsA 1200134 .. 1200156 + -13.5   -5.9873   AAAACACATCCGAAA           GAAGCCGCT GCTAA AGCGGCTTC           TTTTTTTTATGCTAG 100 61
HER31_RS05745 NONE
HER31_RS05750 1203981 .. 1204027 + -11.8  -3.05596   GATTTTGTAATCCAC CATAAGCTGGTCTCGAATGA ATCAAGA TAATCTGAGACCAGCTTATG TTAAGTAGCGCCATC  81 180
        dsdC 1205000 .. 1205022 +   -17   -5.4756   AGTAAGACACGGAAA           CGCCGCTGGT TAT GCCAGCGGCG           TTTTTTATTGAAATT 100 53
HER31_RS05760 1206058 .. 1206071 +  -3.9  -3.82261   GGCTTGCGGCTGTCG               CTATT GGTA AATAG                TTCGTTTTCTTGAGC  55 42
HER31_RS05765 1206677 .. 1206693 + -15.1  -3.62275   TGTTGTATGCATTAG              GGGGGCG CTT CGCCCCC              TTTGCAATCGTCCCT 100 147
HER31_RS05780 1210759 .. 1210772 +  -3.9  -4.53737   TTGATGCCACACCTG               CTATT TTTA AATAG                TGTTTTTTTATATTA  66 119
HER31_RS05785 NONE
HER31_RS05790 NONE
HER31_RS05795 1216484 .. 1216530 + -13.9  -4.20817   TCGCTGTTTGTTTTT TGCCGCTGAGTTTTTGATAAC AAAGA GTTATTGAATGCTCAGCGGCG TTATTTTGGACTGTG 100 41
HER31_RS05800 1218478 .. 1218503 + -14.7  -5.52347   GTAGTGTTTCAAAAA         GCCGGCAACCT AAGA AGGCTGCCGGC          TTTTTTGGTTTTGTT 100 43
HER31_RS05820 1226456 .. 1226493 + -17.9  -3.66018   AGTTGTTATTAGCCA   AACTGGCTGAGCTGAAA TCAA TTTCAGCTCGGCCAGTG    TTATTGCACTACTAG 100 204
HER31_RS05835 1230211 .. 1230224 +  -6.7  -3.09516   GCATGGATAGGTTGG               CGCTT TATC AAGCG                TTAACTGGTCGCGCA  58 8
HER31_RS05840 NONE
HER31_RS05845 NONE
        cybH NONE
HER31_RS05855 NONE
HER31_RS05860 NONE
        hypC NONE
        hypF NONE
HER31_RS05875 NONE
        hypA NONE
        hypB 1240987 .. 1241008 + -12.3  -5.45726   CTGTATTGCTATCAA           GCCGTTGAC GTCA GTCAGCGGC            TTTTTTTGGGCTGTG 100 46
HER31_RS05890 1243076 .. 1243099 + -11.8  -4.18401   TTCGGCCAACAACAA          GCCTCAATGA TTGC TCATTGGGGC           TTTTAGGCTGTGTCG  95 50
HER31_RS05905 1248377 .. 1248395 +  -3.1  -4.66833   ATATTTTTGCGAAGG            CTTGG-GC GGCA GCACCGAG             TTTTTCAGGTTGCGG  66 110
HER31_RS05915 1249968 .. 1249986 + -13.2  -3.46212   GTGCTAACAACAAAA             GCCACCTA AAT TAGGTGGC             TTAGTTATGCGTAAT 100 56
HER31_RS05945 1255741 .. 1255761 +  -5.5  -3.53224   TACCAGTTAGCGTAG            TTAACCGTT AAA AATGGTTGA            TTTCGCAGCAAAGTA  57 26
        aspS 1257729 .. 1257745 + -10.8  -5.27779   GCGTTACAGTAAAAA              CCCGGC CCTAA GCCGGG              TTTTTTGATCTTGCA 100 82
        ruvC 1258411 .. 1258424 +  -2.3  -4.34402   CTGTAAATATAGACA               GTGGT TTAT GCCGC                TTTTGGTGTAACCGC  59 122
        ruvA 1259069 .. 1259091 +    -7  -3.07816   AGATAATCAAAGACG           CGCTTAAAGC GAT GTTATAAGCG           TTAAGTAACTCCAAG  58 6
        ruvB 1260145 .. 1260164 + -11.4  -5.34365   AATTTAGTCGATAGA            CGGTCTGC TTAC GCAGGCCG             TTTTTGTTCTTGTGC 100 48
HER31_RS05970 1261137 .. 1261162 +  -2.5  -6.15536   AGCAATTATAGGGAT         TTGCTTCTAGC TTTT GCTGGAGTCGA          TTTTTTTTGTTGGTT 100 459
HER31_RS05975 1263114 .. 1263129 +  -7.6  -2.90075   CTAAAGTAACCCTAA              CAGTGT GGTT ACACTG               TCTAGTTAGCCCCAG  59 194
HER31_RS05980 1263704 .. 1263732 + -19.1  -5.28778   GCGACACCGCTGATA        CTAAAAAGGAGCC ACT GGCTCCTTTTTAG        TTTTTTGTAACTGGT 100 49
HER31_RS05995 1267853 .. 1267880 +  -2.6  -2.72991   TTTATTTACATTCTT        TCTCGCCCGTACG GAG CGGACGG-CAAGG        TGGTTACCCATATGA  41 61
        fdhF 1272018 .. 1272036 + -11.7  -5.19275   GCTTGAAACTTCCAA             CGCCTGC TACCT GCAGGCG             TTTTGTTTTGTAAGT 100 51
HER31_RS06005 1273101 .. 1273135 + -13.7  -2.77283   GCCGCTAGGATCAAA     AAGGGCGATGATTAC GTGAA GTAGTCATCGCCCTC     TAAATTTGTTGCTAA  86 104
HER31_RS06030 1277468 .. 1277484 + -10.1  -3.23492   ATCACTAGATGTAGT              GCCGAGG GGA TCTCGGC              TGTTGATATGTAGTG  74 372
        nrdD 1279660 .. 1279687 + -14.2  -2.81547   GTAATTGGTTTAAAC        CAGTGCCCACAT GTTG GTGTGGGCGCTG         TGGTTCGTGTGAGGC  87 37
        nrdG 1280325 .. 1280338 +  -3.8  -3.60475   TTGTATGCATTAGGG               GGGA GCTCCG TCCC                TTTGCAATCGCCCTT  53 171
HER31_RS06045 1281280 .. 1281292 +  -6.2  -3.47227   GTCCGCACCTTATGC                GGGC GTTAG GCCC                TTCTCATAATTCGGA  60 119
HER31_RS06050 NONE
HER31_RS06055 1282540 .. 1282559 +   -10  -2.92935   TAACAAGTAAATCTA            GGTGACGCC TAC GGCG-CACC            TGATTTAGGCGTTAT  72 56
HER31_RS06060 1283320 .. 1283332 +  -4.8  -3.33884   TAAACAGCTATTTTG                CCTC TTGTT GAGG                TGTTAATCTTTTCAA  54 111
HER31_RS06065 1284279 .. 1284294 +  -2.6  -2.83403   CTCATCTCGTTCAGC              TGCA-AG AAA CTGTGCA              CTTTCATACAGGGAA  41 209
HER31_RS06070 1286409 .. 1286424 + -10.4  -4.19735   CGATAGTTATTCAAA              GAGCGC TTCG GCGCTC               TTTACTTTTGAAGAC  85 42
HER31_RS06075 1287363 .. 1287376 +  -8.1  -2.87931   AGCGCTGCAGTTTAA               GCCCT TTAA AGGGC                TGTGTACCAACTAAG  61 129
HER31_RS06080 1288546 .. 1288562 + -10.8  -4.96106   TAATCAGATCAAAAA              GGCGCC TTAAC GGCGCC              TTTTTAGTGTTTATA 100 45
HER31_RS06100 1293632 .. 1293670 + -14.7  -3.28712   TGTTCCGCTGCGCAT   TAATCAACAAAGGGCCC CTAGT GGGCCCTTTGGCGATTA   TTGTGGAACGCAAAG 100 72
HER31_RS06105 NONE
HER31_RS06110 1294709 .. 1294745 +  -2.2  -2.53263   CCGCAGCAGCGACGA   ACCTGTCGCTGCCGTTT AGCC ACACCGCAGTG-CAGGC    TCGGTTACCGCTACC  39 7
HER31_RS06115 NONE
HER31_RS06120 1296687 .. 1296697 +  -8.2  -3.95852   GCCAAGCACCGGCTA                 GCGC GAG GCGC                 TTTCATTGGTCGCGT  72 25
HER31_RS06170 1304206 .. 1304233 + -17.2  -4.58466   CCATATTTAGGCGAA        CCCGCTAACTTA GCAA TAAGTTAGCGGG         TTTTGTCGTTCTAGG 100 38
HER31_RS06175 1305887 .. 1305922 + -10.4  -2.66481   CCAGCAGTTGTTTAG    GATACGGGACGGCTAC TTCG GTAGTCGTCCCATGAC     TAGTCTGAGGTTTTA  70 56
        pstC NONE
        pstA 1308590 .. 1308600 +  -6.8  -2.78395   GTGCTGCTGCGCAAA                 CGCT TAG AGCG                 TCGTTGGTAGGAGTT  55 5
HER31_RS06190 1309539 .. 1309559 + -14.1  -4.76041   GATATTGATATCCAA            GCCAATTGC AAT GCAATTGGC            TTTTTGATCGCTATC 100 63
HER31_RS06195 1311397 .. 1311420 + -16.8  -5.45726   CGATAAGTCAGTTAA          TGCCACCGCA GTAA TGCGGTGGCA           TTTTTTTAGGCTGTG 100 103
HER31_RS06215 NONE
HER31_RS06220 NONE
HER31_RS06225 NONE
HER31_RS06230 1320022 .. 1320045 +  -9.5  -2.57468   TGACCGCTTATGTTG          CATGGCGCC GATGCG GGCGCCACG           GTTGGTGTGATAACG  68 38
HER31_RS06235 1322344 .. 1322354 +  -6.8  -4.00042   GAAGAATTTCGAAAC                 GCAG ATC CTGC                 TTGTTTGGTGCCGCA  69 487
HER31_RS06250 NONE
HER31_RS06255 NONE
HER31_RS06260 1327683 .. 1327696 +  -5.2  -2.78813   CGGATTAATAGTTAA               CCGC AAACTG GCGG                ATTGTTAGACTGAGG  49 26
HER31_RS06265 1327888 .. 1327907 + -13.6  -4.84527   ATATCAAAAGATTAA            GCCGCTGT TTTT ACAGCGGC             TTTTTCGTATCTAGA 100 40
HER31_RS06270 1328752 .. 1328770 + -11.6  -3.20382   GCGACCTAAGGCAAA             GGGGGGCG AAG CTCCCCCC             TTAATGCATATAAGA  81 146
HER31_RS06275 NONE
HER31_RS06280 1329166 .. 1329203 + -20.1  -2.82623   ACCGCCATATATAAA   CAAAACCCGCTAACTCA GAAA TGAGCTAGCGGGTTTTG    TCGTTATGGGGCCAG 100 34
HER31_RS06295 1332522 .. 1332543 + -13.1  -4.71426   CTGGGTAAGACCAAA           TGACCAAGC TGGT GCTTGGTCA            TTTTATTCGTAGGCG 100 301
HER31_RS06315 1336290 .. 1336303 +  -4.5  -4.39998   ACCTGGATGGACTGA               TCCGC TGCT GTGGA                TTTATTGTGTAGATA  66 379
HER31_RS06325 1338035 .. 1338078 +  -8.5  -3.04231   GTAATAGTTAAATGA TGTGCACTTCCAGT--TAATC GAGC GATTATAACTAGAAGTGCACA TGCTTATTTGAATCT  66 73
HER31_RS06355 1343111 .. 1343122 +  -4.4  -3.74361   ATCGACGAACAACCT                CATC TGCT GATG                 TTGTTCGTCGATATC  56 72
        thrS NONE
        infC 1347698 .. 1347721 + -14.6  -3.40139   TACAAGTAATAAAGC          CAGCCGAGGC TTAG GTCTCGGCTG           CTTTTATTCGCCTTA 100 46
        rpmI NONE
        rplT 1348378 .. 1348422 + -15.9  -2.89921   GCGTCTACTTAATTA ACCTGTGAAAAAGGGAAGCTC ATT GAGCTTCCCTTTTTTATTGGC TGTGTACCAATTAGT 100 56
HER31_RS06405 NONE
HER31_RS06410 NONE
HER31_RS06415 1353582 .. 1353599 + -11.3  -5.12068   GTATAAAATATACGA             GAGCACC GCAA GGTGCTC              TTTTTGTTGGCTGTG 100 145
HER31_RS06445 1359579 .. 1359589 +  -6.8  -2.80464   TGGATGAATCGCTTT                 GCTG TAA CAGC                 CTTTCCAGTTGATAC  53 238
        apbC 1369519 .. 1369535 + -10.8   -3.0701   TGAATAACCCATGGA              GGGGCC CTTGT GGCCCC              TTCAATCCAACTTCT  76 34
         udk NONE
         dcd NONE
        pabC 1371621 .. 1371635 +  -5.6  -2.70525   CGCAACATCGTTACA               GGGACA CTA TGACCC               GTTGGTTTAAAGGCC  50 1
        mltG NONE
HER31_RS06515 NONE
        holB NONE
HER31_RS06525 NONE
HER31_RS06530 1375425 .. 1375440 + -10.4  -4.18494   ATCTAGCCTTCGGCT              GCACCG ATTG CGGTGC               TTTTAGGTGAGGATG  85 89
HER31_RS06540 1378678 .. 1378709 +  -5.8  -3.05384   CGCATCCGTTGACCA      TCGCTCACCCG-GTT TTT ATCGCTGGTGGGCGA      TTCGGTGGCGAAGGC  53 89
HER31_RS06560 NONE
HER31_RS06565 NONE
        proQ NONE
         prc 1386098 .. 1386116 +   -16  -5.60689   GCGTAATTAACCAAA             CGCCGCTC CCT GAGCGGCG             TTTTTTATTGTCTGA 100 51
HER31_RS06580 1387604 .. 1387619 + -11.8   -5.1675   GTTACCACCAAAAAA              CCGGCC ACGC GGCCGG               TTTTTTGGTCAATCA 100 49
        pepN NONE
HER31_RS06590 1390621 .. 1390637 +  -9.4  -5.24989   CTTAAAACGATACAA              GGCCTC AGTTA GAGGCC              TTTTTTGATCTGTGG 100 60
HER31_RS06595 NONE
HER31_RS06600 1394369 .. 1394386 + -14.1   -3.1372   TTGGGTCGTTTCTAA             GGGCGCC TTCG GGCGCCC              TGTTGGTGGGACATA  95 41
HER31_RS06605 NONE
HER31_RS06610 1397783 .. 1397800 +  -9.1  -5.08824   GTTAATCTGAATAAA             GGTCACC GAAA GGTGGCC              TTTTTTGCATAAACA  93 36
HER31_RS06615 1402861 .. 1402879 + -12.4  -5.00616   AATAATAAATAGGAA             GCCTCGGT AAC ACCGGGGC             TTTTTTACAACAGGA 100 50
        pyrD 1403970 .. 1404007 + -15.1  -3.84284   ATTATTTACATCGCC   CTAAAAGGATCCTTTTG ATCA CAGAAGGATCCTTTTTG    TTTAGTCAATTTTAA 100 59
HER31_RS06625 NONE
       rlmKL 1406847 .. 1406872 +  -3.3  -2.93555   CATCCATAATGCGTG         GTTGATCTGCCA CAA TGGCTGAT-AGC         GTTATCTTGTTTCAC  44 4
HER31_RS06635 NONE
HER31_RS06640 NONE
HER31_RS06645 1411075 .. 1411090 + -10.4  -5.60993   CGGCAACACCGAAAA              GAGGGC TTAG GCCCTC               TTTTTTTATGAAAAA 100 48
         rmf 1411447 .. 1411463 +  -9.4   -4.4078   ATCCACCACCACATA              GCCCTC AATCA GAGGGC              TTTTAATTGCCAGGA  86 43
HER31_RS06655 1412094 .. 1412107 +  -5.3  -3.72363   CCCATCACCAACTTA               CGATT GATT AATCG                TTTGAAATTTAAATG  59 131
HER31_RS06670 1415793 .. 1415806 +  -4.5  -3.30243   CAAGATAAAGCATAA               GGGTC TTCG GATCC                TTATGACCGCTCACT  50 84
HER31_RS06685 1417750 .. 1417779 + -12.4  -3.48276   GATGGTTTTGTCCGT       TAATGCCGATAA TCCTAT TTATCGGCATTA        TTATCTGCACCAGGC  93 63
HER31_RS06695 1424144 .. 1424165 +  -5.3  -3.57561   ACTCAATGTAATGAA           TTTATTATC CATC GATAATAAG            TTTAACGCATTGAAA  57 524
        ccoN NONE
        ccoO NONE
HER31_RS06715 1426755 .. 1426775 +  -6.7  -3.74693   ACCGATGTTAAAGAA            GGTGAGTCC ATG GGACACTCC            TTTGATGGCATCGAG  66 140
HER31_RS06725 NONE
        cadA NONE
        ccoS NONE
HER31_RS06740 NONE
HER31_RS06745 NONE
        uspE 1433642 .. 1433667 + -10.5  -3.60475   TAACGCTGATATCAA         GACCCGAAGAGT TTT GC-CTTCGGGTC         TTTACCCTGCCCCTT  78 52
        ttcA 1434683 .. 1434721 + -19.1  -2.88544   TGCAATTATGTGAGT   TCACTAAAAAGCCCGCT AGATA AGCGGGCTTTTTAGTGC   TGTGTCGCGGTGGCG 100 42
        potA NONE
        potB NONE
        potC NONE
HER31_RS06785 1440658 .. 1440672 + -11.4   -5.5353   CATAGCCACAAAAAA               GGAGCC TTA GGCTCC               TTTTTTATTGCTATG 100 61
        dacB 1450516 .. 1450538 +    -2  -3.61652   GTACACTTTTGCCGC           TATTTATCAC AAA GTGATAACCA           TTCGTTGTTTGGGGA  49 50
HER31_RS06825 1451178 .. 1451198 +  -8.9  -3.18054   ATGCAAGTAGTCGAC            GGCAGCGGC ATT GACGCTGTC            TGTTGCATTATCGGC  65 244
        ubiG NONE
HER31_RS06890 1466488 .. 1466522 + -10.2  -5.63103   GCAAGTAGATCTCAG     CAAACGATCGAAAAAA TTA TTTTTTCGATCGTTCA     TTTTTTTGATTGAAA 100 33
        nrdA NONE
        nrdB NONE
HER31_RS06905 1470514 .. 1470528 +   -10  -4.89063   ACAGATTGAAATATA               GGAGCT TTT AGCTCC               TTTATTTTTACCTGG  93 51
HER31_RS06910 1471375 .. 1471404 + -11.5  -2.78992   CTGGCGCAAAAACAA       TTAGGGCGTGGTA GTGA TAGCGCGCCCTAA        CTTGTTCACATAGCT  77 49
        sppA 1476309 .. 1476327 + -13.2  -4.77173   TAAGAACTTCGTTAA             GCCTAGCA ATT TGCTAGGC             TTTCTTTTGTAAAAA 100 54
        ansA 1477443 .. 1477459 +  -9.4  -5.47159   CCCCACAACAAAAAA              CGGAGC GCTAA GCTCCG              TTTTTTCTATTCCGC 100 70
HER31_RS06950 1480661 .. 1480682 +  -2.2  -2.91144   CAGCACGATAGCTAC           AGTGACAG ACCAAA CTGTCGCA            TAATTTAACCCGTCA  41 69
         gap 1481864 .. 1481881 + -12.7  -4.81249   GACTGAATCTAAAAA             CGCAGGC TTCG GCCTGCG              TTTTTGCGTTTGGGC 100 56
HER31_RS06960 1482737 .. 1482763 + -12.3  -2.91924   TCAGGGGCTCCACCA        GCGGCTGCGGTA AATA TGCCGC-GCCGC         CTTTCTCCAGAATAA  76 185
HER31_RS06970 NONE
HER31_RS06975 1484388 .. 1484404 + -13.7  -4.81249   CGACTAAACAGAAAA              CGCAGGC TTT GCCTGCG              TTTTTGCGTTTGGGC 100 75
HER31_RS06980 1485265 .. 1485289 +  -2.1  -3.35679   CTCCAAATCATCAAC          TCCATAGGC AGACGAC GCTTACGGA          TTGTCACTACACCAG  45 398
HER31_RS06990 1486131 .. 1486151 +  -3.9  -2.78867   AATCGATGACAGCTT            GATATGGCG ATT TGCCAAGTC            CTTGTTCCACATTGA  44 346
HER31_RS07005 1491353 .. 1491368 +  -6.1  -3.34236   ACTGCTTCATATTAC              CGCTG AAAGAG CAGCG               TTCTAACATCAATTT  59 250
HER31_RS07015 1494823 .. 1494846 +  -6.7  -3.20991   TAACTAGCCAAAATA          GGGGCAG CTTAGATCGA CTGCCCC           TTAGCTTCGCTTACA  59 45
HER31_RS07020 1495732 .. 1495749 + -12.7  -4.10407   AAACAAATAGCAAAA             GGCCTGC TATT GCAGGCC              TTTGATTATTGATGT 100 299
HER31_RS07045 1501625 .. 1501637 +  -2.7  -2.88404   TAACGTCACCATTTC                GTAAG TTT TTTAC                ATTATTGACTTTTAC  42 140
         pyk 1503163 .. 1503178 + -11.8  -5.42265   TTCCAAATTAACAAA              GCCCGC ATCT GCGGGC               TTTTTTATGCTTTAA 100 57
         ald 1512406 .. 1512423 + -12.7  -4.77173   CTTAAATCGATAAAA             CGGGAGC TCAT GCTCCCG              TTTCTTTTATCAGGG 100 53
        trxB 1513468 .. 1513487 +    -7   -4.9138   CTCGCATTTCTATTC            TTGGGGGC TTCG GCCCCCGC             TTTTGTTTGAGTGAT  82 46
        cydD NONE
        cydC 1517233 .. 1517250 +  -4.1  -3.20723   CCGTAACTTACCTTT             TCAACCG GCAC CGCTTGA              TTGCGTTGATAACCG  48 407
         aat NONE
HER31_RS07115 1518774 .. 1518797 +  -2.4  -3.48924   TTGGTTGCCGTTCTC          GGGCTAAA ACCTTTAC TTAAGCCC           TTATATGCGGCATGA  47 19
        infA 1519080 .. 1519128 + -14.8  -3.57792   GCTCGTTAATCGCGA TCAT-CCCACAAAAAAGCCCAGC TTAT GCTGGGCTTTTTTGTGGCTGCGA TTTGAACGTGAATAA 100 32
HER31_RS07130 NONE
HER31_RS07135 NONE
HER31_RS07140 NONE
HER31_RS07145 1524777 .. 1524799 + -12.8  -4.25458   CACAGCCCTAAAAAA           GCCAGTTACT TAT GGTAACTGGC           TTTGTTGATGCGCTT 100 359
        cspD 1527890 .. 1527922 + -11.5  -5.04325   GTGGCACCCCAAAAA      TAGAAAAGCAGATCG CTT TGGTCTGCTTTTTTA      TTTTTGTCGTTTAGC 100 45
        rluE 1530236 .. 1530247 +    -3  -4.60317   CAACAAAAATAGCGG                CTTA GAGA TAAG                 TTTTGCTTGTTGTAT  65 70
        mnmA NONE
        hflD NONE
        purB 1533510 .. 1533527 + -12.7  -5.76949   TTCTAACTTCCCTAA             CGCCACC GCAA GGTGGCG              TTTTTTTTGGCGGTG 100 35
HER31_RS07190 1534959 .. 1534972 +  -9.5  -5.31855   TGTGCATTAAAAAAA               CCGCC GTAT GGCGG                TTTTTGTTGTTACTC 100 59
HER31_RS07200 1536683 .. 1536698 + -10.4   -5.1925   TCACTAATAACGAAA              GAGCCC TTTG GGGCTC               TTTTTTCAGTTGTGA 100 52
HER31_RS07205 1537863 .. 1537880 + -14.1  -4.11751   TTACAGATAAAAAAA             CGCCGGC TTAC GCCGGCG              TTTTCGGAAGTTACT 100 73
        gloA NONE
HER31_RS07220 1539045 .. 1539055 +    -4  -2.84234   GTGTTGTTGTCGTGG                 TTGT TGC ACAA                 ATTATTGGATTCATC  46 118
HER31_RS07225 NONE
HER31_RS07230 1540247 .. 1540268 +  -5.9  -3.79043   GTAACCGATTCAACT           GCTCGT-AAC GAC GTTCACGGGC           TTTAGCTTGCTGGTA  62 277
HER31_RS07240 1541611 .. 1541631 + -18.3  -4.24204   TACTACAACCGAAAA            GGGCGTGCC ATT GGCACGCCC            TTTTGAATCTGCATC 100 57
HER31_RS07275 1547991 .. 1548020 + -10.7    -3.406   AATCGTACCAGCATT       G-GTCGAGGCCACC TTA GTTGGCCTCGGCAC       TTGCTTCGCTATTCA  80 39
HER31_RS07330 1565323 .. 1565377 +  -7.9  -2.80994   CGTTAGGAGTACGGC TTAATCGTGTATTGCCACAGCGTTG GTTAA CATTGCTGTGGCAATACGCCAAGGA TCTGCTCAGCTTCAC  60 35
HER31_RS07335 NONE
HER31_RS07340 1568084 .. 1568108 +  -2.1  -4.23999   CTAGCGCGAGGATCG          CATCGATATCC AAT GGATGTTGGTA          TTGTTTTAACTGTGG  57 345
HER31_RS07355 1573138 .. 1573153 +    -9  -5.19879   ATCGCTTCACAAAAA              CCACCT ATTT AGGTGG               TTTTTCTATTTCGGA 100 48
HER31_RS07360 NONE
         idi 1574453 .. 1574467 +   -10  -2.87136   GTTAATCGTCAAGAT               GAACGG TCG CCGTTC               TGTGCTGCTTCATCA  72 44
HER31_RS07375 1575483 .. 1575518 + -12.1  -3.29043   AAAAACGTAATAATA    TTAAGCAGAAACGAT TTCAGC ATCGCTTCTGCTTAA     TTATCCAGCCAAGTT  85 31
HER31_RS07400 1579403 .. 1579416 +  -9.5  -5.24989   GTGCGATCAAAAAAA               CCGGC TAAG GCCGG                TTTTTTGCTATCTGC 100 50
HER31_RS07420 1583703 .. 1583726 + -11.7  -4.83593   AAGTTGTTGCTAACA          GGGCGACCT CTACAT GGGTCGCCC           TTTTTAATGGTTGTT 100 48
HER31_RS07430 NONE
HER31_RS07435 1593095 .. 1593118 + -13.8  -5.12068   CATTAGCAATAAAAA          GCCGCAACGG ATAA CCGTCGCGGC           TTTTTATTAAATATA 100 216
        pabB 1595052 .. 1595068 +    -3  -3.05597   TACTATCGAATCATA             G-GCTGT TATT ACAGCGC              ATTTTCACGAATACA  43 65
HER31_RS07450 1595560 .. 1595573 +  -2.4   -3.5393   TGCCGCACACCTTGC               CGAT TAGCTC ATCG                TTTACAGGACGTAAT  47 19
HER31_RS07455 NONE
HER31_RS07460 NONE
HER31_RS07465 NONE
HER31_RS07470 1598661 .. 1598693 +  -9.3  -3.17212   CGCTTAATCTACATA      GTACCAACATCAG CAAGCGA TTGATGTTGGTGC      TTAATACCCTAATCA  70 34
HER31_RS07475 1599805 .. 1599819 +  -8.5  -2.88776   ATTTCCCTGAGACAG               GCCGG TGATT CCGGC               ATTTAATAGATTTCG  65 146
        asnS 1601282 .. 1601299 + -12.7  -5.40474   AGCTGTTACCAAAAA             CCCGCCA ACAT TGGCGGG              TTTTTTTAACGCCGT 100 49
HER31_RS07490 1602748 .. 1602764 +  -2.1  -4.56597   TACTCTCCCTCGCAG              CGTGGCT TTC AGCCCAG              TTTTTAAACGACGCA  62 48
        sodB 1605180 .. 1605195 + -10.4  -5.31545   TACAAACACTACAAA              GGAGCC TAAT GGCTCC               TTTTTTGATCTTATT 100 47
HER31_RS07510 NONE
HER31_RS07515 NONE
HER31_RS07520 1610258 .. 1610268 +  -2.4   -5.0916   GCACCAGTGGCAGCA                 CCTC GTC GTGG                 TTTTTCTGTTCAGCA  74 104
        nhaB 1612779 .. 1612794 + -10.4  -5.83822   TTAAGTATCTTTAAA              GGCACC TATT GGTGCC               TTTTTTTTAGCTGTA 100 52
        dsbB 1613563 .. 1613581 + -11.7  -4.93661   AACCGATAATAAAAA             CGCCGAC ATTTC GTCGGCG             TTTTGTTGTTGCTAT 100 32
        minC NONE
        minD NONE
        minE 1617682 .. 1617699 + -12.7  -4.45068   CACAGCCAATAAAAA             GGGAGCC TTAT GGCTCCC              TTTGTTGTTGCGGGT 100 322
        hisG NONE
        hisD NONE
        hisC NONE
        hisB 1632094 .. 1632104 +  -6.8  -2.66435   TGACGAACTGCCTTC                 CTCC AAA GGAG                 TGCTGTAATGACGGT  55 7
        hisH NONE
        hisA NONE
        hisF NONE
HER31_RS07645 1634820 .. 1634840 + -11.9  -4.24342   CGCTTACAGCGAAAA            GCCAGCTAC TAT GTAGTTGGC            TTTCTTGATCGCGCC  95 61
HER31_RS07650 1636334 .. 1636364 + -18.4  -3.09784   GGTTGGACAACTAAA       AAAAACGCCGCCCA AGT TGGGCGGCGTTTTC       ATTTATTCACCGTGA 100 40
HER31_RS07670 1641875 .. 1641889 +  -8.5  -4.64766   AATCATCTTACTAAA               CCGCC CTTGA GGCGG               TTTTTGGGATCTGGG  89 65
HER31_RS07675 1642919 .. 1642940 +  -3.6  -3.54146   TCTTGTTTAGATCTT           GGCGCCGT GATTTA ATGCCGCC            TCTTTAATTACGGCG  50 48
HER31_RS07680 1643664 .. 1643683 + -13.6  -3.73914   CAGCACTAGCAAAAA            CACCCCGA CGGG TCGGGGTG             TTCTTAATAGATAAT 100 333
        pdxY 1645261 .. 1645274 +  -3.1  -3.46709   AGCCACGTAACTAAG               GGTTT TGAT GAACC                TCTTTCGCCTTTTGT  50 63
HER31_RS07695 1646824 .. 1646836 +  -4.8  -4.25754   AGTTTATCTTAGCCT                TCGG CTTCA CCGA                TTTCGTTGTTTTTAG  65 79
HER31_RS07705 1650675 .. 1650688 +  -3.8  -4.09864   GCTTGTAGTAATGTC               GCCT CGGTAA AGGC                TTTTGGCGGCTCAGT  59 500
HER31_RS07715 1653485 .. 1653496 +  -5.8  -3.81137   GCTGTTTAAATCCAG                CCAC TGTT GTGG                 TTTGAATATTTGAGG  64 295
HER31_RS07730 1657653 .. 1657670 + -11.3  -3.64755   CCGCAAATGCAAAAA             GCCCATC TATC GATGGGC              TTATTCAGGCTGTGT  87 355
HER31_RS07745 NONE
HER31_RS07750 1661518 .. 1661548 + -11.3  -3.18383   TGGTACACAGCCTAA       GAAAGCGGTAAAT CAAAA AGTTACCGCTTTC       TTAGTGACTCAAAAT  81 336
HER31_RS07755 1662328 .. 1662345 +  -3.4  -3.14564   AAACTGGAAGTGATA             CTGTTG ATGCCG CAGCAG              TTGCTGCAACCATGA  44 422
        flgA NONE
HER31_RS07880 1683402 .. 1683421 + -12.2  -4.76041   GCCGCTATACTGCAA            CAGCTGAG TTCG CTCAGCTG             TTTTTGCTGGCTGTA 100 50
        flgM NONE
HER31_RS07890 1684450 .. 1684468 +    -3  -4.87665   TCGCTCAGTTTGCAA             CAAGCTGA TCT TCTGCTGG             TTTTTGTCACTAACC  70 221
HER31_RS07935 NONE
HER31_RS07940 1694306 .. 1694323 +  -2.7  -3.16944   TAAAGCGAAAGGGCT             ATGGTAA TGAA TTACCAA              TCTTACATTGATCGT  45 19
HER31_RS07945 NONE
HER31_RS07950 NONE
        fliP NONE
HER31_RS07960 NONE
HER31_RS07965 NONE
HER31_RS07970 NONE
        flhA 1700563 .. 1700579 +  -9.4  -5.12068   ACTGACTACTATCAA              CGCCTC ATTTC GAGGCG              TTTTTCTTAGCTGTG  93 58
HER31_RS07980 1701540 .. 1701561 +  -2.2   -3.4252   AATCACTTCTTTAAC           GAGGCTAC TAAATC GCAGCTTC            TTATCATCAATACAA  47 163
HER31_RS08020 1708769 .. 1708795 + -15.3  -3.07816   AACAAAAACGAAAAA         GCCCATAGCTA TCAAC TAGCTATGGGC         TTAAATAAATGGCGG  93 154
        rnhA 1712120 .. 1712136 +  -3.5  -4.56597   GATTCAGTACGGTCG              GCCGCGG AAC CCGCCAC              TTTTTGCGGACGGGA  66 90
        gloB 1713693 .. 1713712 +  -6.4  -5.91981   GGTACTGCAATCATG            GGCCGGAT ATAT ATCTGGTC             TTTTTTTTGGGTTTT 100 56
HER31_RS08070 1715326 .. 1715344 + -14.6    -3.786   TCGCTAACAAAAAAA             GGCCAGCA AAC TGCTGGCC             TTTAACGTTTTATGA 100 41
HER31_RS08085 1718590 .. 1718600 +  -6.8  -3.20326   ACCAGCACTTGTATC                 CACC ATA GGTG                 TTGCCTCTGTATTTA  58 478
HER31_RS08105 NONE
HER31_RS08110 NONE
HER31_RS08115 NONE
HER31_RS08120 NONE
HER31_RS08125 1724637 .. 1724651 +  -4.4  -2.53263   TTAAAAGGCAAAATA               TATTAT TAT ATAATA               TGCGTTGGGGATAAG  46 51
HER31_RS08130 1725064 .. 1725079 + -10.4  -5.00616   AGTAGTTAATTAAAA              GGTGGC ATAA GCCACC               TTTTTTACCCCCGCA  93 36
HER31_RS08135 1726831 .. 1726861 + -12.6  -4.48713   AGTAATGAACAGCAA       CAGACGCCCACTTA TTG TAACAGGGCGTCTG       TTTATTCTTCCTGCC 100 54
        metN NONE
HER31_RS08180 NONE
        metQ 1737631 .. 1737650 + -12.2  -4.83677   ACACCACCAAAATAA            GAGGAAGC CTAG GCTTCCTC             TTTTCATTTTGTTTT 100 324
HER31_RS08190 1738305 .. 1738321 +  -6.5  -4.28762   CCAATGAGATCCAAG              CTGCACC GAA GGTTCAG              TTTTAGTGAACTTCT  70 3
HER31_RS08195 1740123 .. 1740134 +  -2.2  -3.25823   AGTAATACTGATAAA                TAGC CGTT GCTG                 TTCATCTAAGGAAGC  44 55
HER31_RS08200 NONE
HER31_RS08205 NONE
HER31_RS08210 1742904 .. 1742933 +  -5.8  -3.56142   AGTTTGAAATTGCGA       TGATACGG-CACC CTCGT GTTGTCCGTATCA       TTACTTCTTAGTGGA  57 39
HER31_RS08235 1748493 .. 1748506 +  -8.1  -2.71924   CTAAGCCTTCGGCTT               CACCG ATTT CGGTG                CTTTAGGAAAGGATA  60 242
HER31_RS08240 1760122 .. 1760141 +  -7.8   -3.9373   TGCCTAAAAAAGAAA            ACCCAGCA TCAA TGCTGGGC             TTTGGGTTTTAGCTA  72 525
HER31_RS08265 1763934 .. 1763946 +  -3.3  -4.33274   TAGCAAAACTCAAAC                CCTGC ACG GCAGA                TTTTGCTGCTATCAA  61 74
        cysZ 1772832 .. 1772858 + -19.6  -4.76041   TGAGTGAAACAAAAA         GGCGGCATCAAT TCG ATTGATGCCGCC         TTTTTAATGGCTGTG 100 61
HER31_RS08305 1776892 .. 1776921 + -10.7  -3.06162   ATTGGCCAAAACCAA       CAATGGCGCACCG TTTT CAGTGAGCCATTG        TATTAGCCTAGGATG  76 52
HER31_RS08315 1778453 .. 1778469 +  -2.9  -4.42748   ATATATAGGAGTGCG              TGTGTCG GTC CAACGCA              TTATTTTTGCCATAG  60 33
HER31_RS08320 1778929 .. 1778943 +  -7.2  -2.65206   GTGCCAATAAAAAGA               CTAACT ATC AGTTAG               TAAGTTCTAATTTGT  57 57
        cysK 1780155 .. 1780174 + -12.2   -5.4505   TTAAGATAAATTAAA            GACGACTC AAGC GAGTCGTC             TTTTTTGTTACCGCA 100 51
HER31_RS08330 1780683 .. 1780700 +    -2  -3.49135   TCAACGAAGCAAAAA             CTCGTT GTCCGA AATGAG              TTAATTGGTTGTATC  47 194
         crr 1781299 .. 1781323 + -13.6  -3.35867   AACTTTAAGCTCTGC          CCAACGCCGC ATTCA GTGGCGTTGG          TTAGTTCCAAATTGC 100 33
HER31_RS08340 NONE
        dapE NONE
HER31_RS08350 1783675 .. 1783693 +  -8.9  -5.09685   CTGCACAAATAAAAA             TAGGAGC TTAAC GCTCCTA             TTTTTCTATCTGTTA  93 72
HER31_RS08360 1786450 .. 1786470 +  -5.3  -3.14564   AGCGAGTTTGGTGCG            TGCGCCACA TAG TGGGGGGCA            TTAATAGCCCGATAG  51 432
HER31_RS08375 1789090 .. 1789116 +    -5  -3.14881   AATATCGCGGATTCC         CATATGCGTGGC GGT GCGGCGCAGGTG         TTGATCAAAGGCTTG  51 133
HER31_RS08405 1802434 .. 1802457 + -12.4   -5.4833   AAGAGTTGTGAAAAA          GCCACCACTG AATA CAGGGGTGGC           TTTTTTGTTGGGTGC 100 49
HER31_RS08415 NONE
HER31_RS08420 NONE
HER31_RS08425 1805143 .. 1805159 +  -6.5  -3.21354   CCCCCTCCATTCAGG              CAAAGCC ACC GGCATTG              TTAATGGCTATGTAC  57 95
        napF NONE
HER31_RS08435 NONE
        napA NONE
HER31_RS08445 NONE
HER31_RS08450 NONE
HER31_RS08455 1810315 .. 1810341 + -15.2  -4.72486   TAGCGCCACAGTAAA         GGGCCCTTAAAC ATG GTTTTAGGGCCC         TTTTTAGGCTTTGTA 100 46
HER31_RS08495 NONE
         bcp 1821896 .. 1821920 +  -8.5  -3.81146   AAATAAAACAATAAA          GGCGCTCCC CTTGCTA GGTAGCGCC          TTATTCATTAGAACG  75 271
HER31_RS08520 NONE
        arsC NONE
HER31_RS08530 NONE
HER31_RS08535 1829666 .. 1829689 +  -9.6  -3.25942   AAATTAAATAACGAA          GGTCGCAAAC ACTG GTTTGAGACC           TTCGTCTAGCCGAGT  72 49
HER31_RS08545 NONE
HER31_RS08550 1832948 .. 1832969 +  -7.3  -5.37593   TCTTCTAAGCTTTAA           GCACCATAT TGAT AGATGGTGC            TTTTTTCGTTTCGCG  95 373
        aqpZ 1833737 .. 1833776 + -10.1  -5.33405   AAGCTCGAGAATGGA  CAGTAAAAAGGCGCTCT GTGCAA AGAGCGCCTTGTTGGTG   TTTTTGTTTACTGCG 100 44
HER31_RS08590 1843622 .. 1843639 +  -8.4  -3.60475   TGTATGCCTTTTTTG             GGGGGA GCTCCG TCCCCC              TTTGAAATCCCACTT  72 263
        purM NONE
        purN 1848945 .. 1848965 +  -7.6  -4.56597   GCACCAGTCAAAAAA           GGCAACTGC TAAC GC-GTTGCC            TTTTTGGCCACAACA  80 64
HER31_RS08615 1851380 .. 1851415 + -20.6  -4.07124   CTAAGCTAACCGCTT    AAAAAGCCCCGCCAAG GAAA CTTGGCGGGGCTTTTG     TTTGTCTAGCTGCTA 100 52
HER31_RS08625 1855347 .. 1855357 +  -3.2   -3.5393   TTACTACCGATATCG                 CCGT CAA ATGG                 TTTGGCGGCGATAAT  50 42
        pepT 1856826 .. 1856836 +  -3.2  -2.57244   GACCTAACCGAACAT                 GTTC AAG GAGC                 TACCTTAATGGCTAG  42 163
HER31_RS08635 1859246 .. 1859261 + -10.4  -4.67011   ACTGATTATTTTAAA              GGCTCC CACG GGAGCC               TTTTTCGATCACCTT  91 61
HER31_RS08640 NONE
HER31_RS08645 1860643 .. 1860671 +  -5.9  -2.57564   AGGTAGAATTCAGCG        TCCCCACTGGCGG CAA CAGTTAGTGAGGA        GTTCTCGGACCATCG  50 68
HER31_RS08655 1863021 .. 1863037 + -13.7  -5.33866   TCGGCTATAACCAAA              CGGCGCA TTT TGCGCCG              TTTTTTATAAATTTA 100 51
        asnB NONE
HER31_RS08665 1866226 .. 1866251 + -15.5  -4.06419   GCCAATAGTGATAAA         CAACGCAGCCG TTAT TGGCTGCGTTG          TTGTTTCTAGCAAGC 100 48
HER31_RS08670 1867621 .. 1867668 +  -7.9  -3.25088   AGTCTGTTAGTCCAA CGG-CGCTTGAGTAGGTGTTAGT CTCG GCCAATATC-ACTCAAGCGACCG TTGCTGAGTTTAAGC  64 46
        pyrB NONE
HER31_RS08720 1885651 .. 1885678 +  -5.5  -3.41602   AGCTTAATTAATAAA        G-GCTGCCCAGG CTTGT TCTGGGCCGCAC        TTCTCATCCAGTAAA  56 30
HER31_RS08725 NONE
HER31_RS08730 1887710 .. 1887735 + -11.1  -4.92385   GCAACGACTCCCACA         GCCCAAGCGCT TAAT GGCACTTGGGC          TTTTATTTGGCTGTG 100 49
HER31_RS08750 1893548 .. 1893561 +  -6.7   -2.8076   ATTTGTGACGTTCCC               CTGAG AACT CTCAG                TGCTTGCTGATGATT  55 195
HER31_RS08755 NONE
HER31_RS08760 NONE
HER31_RS08765 1897016 .. 1897041 + -10.5  -5.40004   CTAAATAAACCAAAA         GGCAACCAACA CTGG TGTTGATTGCC          TTTTTTCGTTTCATG 100 37
HER31_RS08780 1898099 .. 1898125 + -12.3  -3.68222   AGAAGTAGCGATGAT        GC-GCGCCGGTC CAGC GATCGGCGCGGC         TTATTAACGTTCAAA  95 33
HER31_RS08785 1899625 .. 1899640 +  -4.7  -3.38581   ACGAGGTGTTTTAAA              CTCAG CTAAGA CTGAG               TGTTTGCCGATTAAT  52 27
HER31_RS08790 1900447 .. 1900469 +  -7.7  -3.52472   GATCAATAACGCCAG           GCTAACGGC ATTGG GCTGTTGGC           TTAGTTTGCCCCTAT  64 400
HER31_RS08805 1901908 .. 1901923 + -10.4  -5.60689   CGTCGCTACTATTAA              CCGCGT TTCG ACGCGG               TTTTTTGTTATCTAG 100 53
HER31_RS08810 1902999 .. 1903011 +  -3.4  -4.11183   CAAAAGGCTGTATAG                CAAC TAAGT GTTG                TTCTTTCTAATAGAG  57 26
HER31_RS08835 1909139 .. 1909171 + -16.3  -4.30995   AACCTCGCAGTTCAC      CTCCCCCGTCATTGG ATT CCAGTGACGGGGTGG      TTATTTTATCGCACC 100 45
HER31_RS08840 1910007 .. 1910023 +  -2.2  -4.07687   TCTCTATGCCAGTTA              TTTGGC ATAAG GCCACA              TTTTGAGAGAACCAT  55 16
HER31_RS08845 1910442 .. 1910459 +  -5.5  -3.40022   CTCAATAAAATGAAT             CGCGAAT TCTA ACTCGCG              TTACTCTGTTGCTTG  56 14
HER31_RS08850 1911188 .. 1911205 + -12.7  -4.79352   TTGAAGATACAAAAA             GGGCTCC CGAA GGAGCCC              TTTTGTTATCCATAA 100 67
        xseA 1921433 .. 1921443 +  -3.2  -3.18383   GCTTGAACTAAGGCT                 TGAG TAG CTCG                 TTCATGCATGCCACT  46 85
HER31_RS08925 1932973 .. 1932989 + -11.5  -3.15999   CATAGAAACAGAAAA              GGCGCCT CAT GGGCGCC              TTAAATGTCTACAAA  81 36
        suhB 1942508 .. 1942531 + -16.8  -5.45726   TGCTGTAATACAAAA          GGGTCGCTCA GCAA TGAGCGACCC           TTTTTTTGGGCTGTG 100 50
HER31_RS08990 1943464 .. 1943482 +  -8.9  -5.10461   TTTTGATAACTATAA             GATCAGG TATGC CCTGATC             TTTTTATTGGCTAAA  93 45
HER31_RS08995 1944300 .. 1944354 +  -4.6  -3.92592   AGCACGAAACCTTCA CCATCGACTACGATTTTGTCCATTTT CTGTA AAAATGC-CAAAATC-TGGTCGGCGG TTTGGTCTTCCGAGT  59 65
HER31_RS09005 NONE
        yehT 1947005 .. 1947015 +  -5.4  -2.79632   CACTTAAACAGAAAT                 TTGG GTT CCAA                 TAGTGTGATTTTTTA  50 12
HER31_RS09015 1947428 .. 1947456 +  -6.8  -2.55267   CAATTTAACTATCTA       GCA-TGGAGTCAT CGCT GTGGCTCCACTGC        TCAATTCCAGTATTT  55 50
HER31_RS09020 1949084 .. 1949103 + -13.6  -5.83822   TCTTCGAACGAAAAA            TGGCGACC CTCG GGTCGCCA             TTTTTTTTGGCTGTG 100 61
HER31_RS09065 1957404 .. 1957414 +    -4  -3.67823   ACTTAAGCGGATATC                 TAGT TGA ACTA                 TCTTTGTCATTTCTA  53 58
HER31_RS09070 1958319 .. 1958337 +    -6  -2.60992   TAACGTATCCCAGCA             TACCTTGG TCA CCAAAGTA             CTCTTTGGCAAGGTT  50 359
        ppk2 NONE
HER31_RS09090 NONE
HER31_RS09095 NONE
HER31_RS09100 NONE
HER31_RS09105 1966707 .. 1966718 +  -4.4  -3.90316   TAACGTAATAGATGA                TCTG CTCA CAGA                 TGTTTTTACAGCGAT  59 214
        ppk1 NONE
HER31_RS09135 1975915 .. 1975936 +  -4.4  -3.33696   CGTTAGCCACAATGT           GGCTAGGT AATGGC ACGTAGCC            TTGCTTGGCCACCAC  50 59
        rdgC 1981302 .. 1981322 +  -8.3  -4.81685   ACCAGTTCGATGAAA            TGCCAGTAG CCT TTGCTGGCA            TTTTTGCTGCTTCCT  89 58
HER31_RS09165 1983636 .. 1983655 +  -7.9  -4.61747   CTAAAATAGAATTCG            CTGTGCT GCATAA AGCACAG             TTTTATGGTTATTAA  85 37
HER31_RS09170 NONE
HER31_RS09175 NONE
         xni NONE
HER31_RS09185 1988174 .. 1988186 +  -3.4  -3.90744   TGAATGGCTGTGTAC                CAAC TAAGT GTTG                TTCTTTCCAAAGCAG  55 65
HER31_RS09205 1993187 .. 1993200 +  -6.7  -3.49475   ACTTGGATTAGTTGG               CGACT GAAT AGTCG                TTATGTCAGCATAAA  62 30
HER31_RS09210 1993783 .. 1993801 + -12.4   -4.0371   GGGCGATATAAAAAA             GCCCGCTG TTA TAGCGGGC             TTTCTCTGCAAACTC 100 30
HER31_RS09220 1995777 .. 1995789 +  -4.8  -3.66732   CTCCATCATCTTGAT                GCTG TAATC CAGC                TTGTTGGGATACTTC  56 133
HER31_RS09230 1999601 .. 1999618 + -10.5  -5.12068   CGTAGATAACACCAA             GCCTCGC TGAT GCGGGGC              TTTTTCTTGGCTGTG  93 56
HER31_RS09235 2001043 .. 2001053 +  -5.4  -3.57406   GATAGCGGCCAAAGC                 GATC GAT GATC                 TGTTTGTGGTGCAAC  56 117
HER31_RS09270 2005524 .. 2005540 +  -9.4   -5.1356   AGAAATAACAAAAAA              GCCACC CTCGC GGTGGC              TTTTTGTTAGTGCAG  93 33
HER31_RS09275 NONE
HER31_RS09280 2009911 .. 2009944 + -15.4  -4.21936   GGTTAATCCCACTAC     TACCGAGAGCACGC CAGCGC GCGTGCTCTCGCTA      TTTTGGCGTTATACC 100 45
HER31_RS09290 2011708 .. 2011718 +  -5.4  -3.64703   GATAACCATTACTGT                 CCAA CGT TTGG                 TTTCCATAAACCCGA  56 431
HER31_RS09305 NONE
HER31_RS09310 2014515 .. 2014525 +  -5.4   -3.3164   CCCACTTGAGTTAGC                 GTTC TTG GAAC                 TTCTACACATCGATT  56 53
HER31_RS09315 2015991 .. 2016013 +   -12  -3.54459   ACACAGCCCAAAAAA           GCCAGTCAAC TAA GCTGACTGGC           TTTGGGAGGAATTGG  88 403
HER31_RS09330 NONE
HER31_RS09335 NONE
HER31_RS09340 NONE
HER31_RS09345 NONE
HER31_RS09350 NONE
HER31_RS09355 NONE
HER31_RS09360 NONE
HER31_RS09365 2024171 .. 2024187 +  -5.1  -2.68356   TGGTGCCACCGGTTA              CCGTATT GTC AAAACGG              GTTAATTGATTATGA  48 4
HER31_RS09370 2025066 .. 2025093 + -13.6  -4.93877   AGTTCTAATTAAACA        TAAAACCCAAGG TGCG CCTTGGGTTTTG         TTTTATTTAATGGCA 100 53
HER31_RS09375 2026874 .. 2026888 +  -2.8  -3.90291   GTAACTCATGAATAC               CCCTAT GTT ATAGAG               TTTAGTTGCCAAAAT  54 452
HER31_RS09390 2029462 .. 2029480 +  -2.4   -4.1891   CATTTTGTATATCTC             AGCTAAGT GAT ATTTAGCG             TTTATCTTCCCAACG  57 9
HER31_RS09395 2030744 .. 2030764 +  -8.9  -3.27994   ACCCGAAAGAGTGCT            GCCATCGGT AGA GCCGAAGGC            TTGATATAAACTTCA  71 261
HER31_RS09400 2032757 .. 2032796 + -15.8  -3.88232   CAGCTATTTCAAAAA  GCAAAAAGGCCACCCTAGC AGT GCTAGGGTGGCCTTGG-GC  TTCTTATCTAGGCAA 100 66
        lolB NONE
        ispE NONE
HER31_RS09445 NONE
HER31_RS09450 2041864 .. 2041880 + -15.1  -5.24129   TGCATTGCCCCAAAA              GCCCCGC CAT GCGGGGC              TTTTTTGTACCCGGA 100 47
HER31_RS09455 2044015 .. 2044034 +   -15  -4.94972   ATGATTAGCATTAAA            CGGCCTCC TTTC GGAGGCCG             TTTTTCGTTGTGCTA 100 47
HER31_RS09460 NONE
         pth 2045466 .. 2045478 +  -6.2  -2.70932   CCTACACACTTTCTC                GGCC CAACC GGCC                TAATTACGACAAAGG  53 10
        ychF 2046609 .. 2046627 + -14.6   -5.4251   TAATAGCCACCATAA             GCCCAGTC ATC GACTGGGC             TTTTTTGTATCTAAG 100 38
HER31_RS09475 2048155 .. 2048182 +  -4.2  -2.91582   AACTCAGCATAATAC       GCC--GCGTTCC CAACGA GGAACGCATGGC        TATGTAGCTCAGCTG  46 197
HER31_RS09480 2048330 .. 2048344 +  -8.6  -3.10579   GGCACAGGTTTAGAC               TTGTGG TAG CCACAA               TGCTTCTTTTGAAGC  66 99
HER31_RS09485 NONE
HER31_RS09490 2048618 .. 2048631 +  -6.7    -3.136   ATTTTTAAAGACACT               CTGGT GAAA ACCAG                TATGTTGACTGTTGG  59 40
HER31_RS09495 NONE
HER31_RS09500 2049101 .. 2049123 +  -4.3  -3.09505   ATGACCATAATAAAA          T-CTGACTAA TTGT TTAGTCAGCA           TCTTCACTCGACTAT  49 324
HER31_RS09505 NONE
HER31_RS09510 2049369 .. 2049381 +  -2.7  -2.79272   TAGTCCAGCCATTTT                TAAAG ACG CTTTG                GTATTTTCCAAATGT  41 30
HER31_RS09515 NONE
HER31_RS09520 2049564 .. 2049591 +  -3.6  -3.07443   CGCCATAGCCACCAT        GA-ATTATTGAGT TTG ACTCAATAACATC        TTCACTCGACTATCA  45 27
HER31_RS09525 2049720 .. 2049740 +  -2.5  -3.07962   CTTCCGCACCATTTT            ATGGTGCTC ATA GAGTATCAC            TGTTGGACTATCGCC  43 30
HER31_RS09530 2049902 .. 2049916 + -11.4  -5.71712   TAGAATACGAAACAA               CCGACC TCT GGTCGG               TTTTTTTGTATCCGG 100 109
HER31_RS09545 2052750 .. 2052771 +  -4.5  -2.50113   AAGGGCAACAGGTAA           CATTG-GCTG AGA CAGTACAATG           ATTAATGCACTGGTG  46 3
HER31_RS09550 2056342 .. 2056361 + -12.2  -4.17657   GCCAAGACAAAAAAA            CGCACAAC CAAA GTTGTGCG             TTTTAGGATGTAATC  95 515
HER31_RS09570 2060100 .. 2060119 + -13.6  -5.10767   TTGGTCAACAAAAAA            CACCGAGC AAAT GCTCGGTG             TTTTTGTATTAAGTC 100 495
HER31_RS09575 2061387 .. 2061400 +  -6.7  -3.66654   ACTTTAATAATTTTC               GACAC CAGG GTGTC                TTTCACCTTGGCGTC  64 34
HER31_RS09580 2061930 .. 2061941 +    -3  -3.32769   ACCACTTCAACGAAT                GATT GACC AATC                 TTACTGATTTAAACC  46 42
HER31_RS09585 2062837 .. 2062852 +  -4.7  -4.31085   TTAGTGCGCGGTTGG              CACTG ACACAA CAGTG               TTTTACCTTGCTGTC  66 90
HER31_RS09595 2066112 .. 2066127 + -10.4  -4.72272   CAGCCCAAAAAAAAA              CACCGC CGCA GCGGTG               TTTTTAGTAAAGCAG  91 332
        mltF 2071623 .. 2071659 +  -8.9  -3.62859   CTTGCCATACTTTAA    TGTTACATCAGTGCT TGATGGC GGCACTGGTGTAATA    TTTAACCATTGTGCT  75 54
HER31_RS09615 2074446 .. 2074457 +  -4.4  -2.87825   AAATCGCTAACAAAT                TCAG TTAA CTGA                 CTTGTTAATGCTTTT  48 120
HER31_RS09620 NONE
HER31_RS09625 2075750 .. 2075765 +  -3.2  -3.35679   GCTGATGTATACCGC              TGCAAC GAGA GCTGCA               TTATGAATCAACAAC  48 4
HER31_RS09630 NONE
HER31_RS09635 2077212 .. 2077232 +  -2.5  -3.18383   GCTTAAGATAAACTT            CAACAGC TAACTAC GCAGTTG            TTGCTGCATCGCACT  45 371
        galU 2085089 .. 2085108 + -13.6  -5.24531   ATGTTACTTTTCTAA            GCCAGAGC AACC GCTCTGGC             TTTTTTCTAGGCGCT 100 53
HER31_RS09680 NONE
        pilV NONE
HER31_RS09690 NONE
HER31_RS09695 NONE
HER31_RS09700 NONE
HER31_RS09705 2093025 .. 2093052 + -18.6  -5.12068   TCGTGTTACAAAAAA        GGCCAACGACAT AATA ATGTCGTTGGCC         TTTTTATTGGCTGTG 100 44
HER31_RS09725 2100519 .. 2100553 + -17.3  -3.78934   TAACATCTGTTAAAC     CAAAGCCCCAACGTT CGGTC AACGCTGGGGCTTTG     TTGTTATCAGAGCCG 100 54
HER31_RS09730 2101786 .. 2101807 + -13.7  -3.43217   TAATGCGACAAAAAA           GCCCGAGGT GGCG GCCTCGGGC            TTGCTTCGCTTTAGA 100 357
HER31_RS09755 NONE
HER31_RS09760 NONE
        pxpA 2109388 .. 2109402 +    -7  -3.60475   TTGTATGCATTAGCG               GGGAGC TTC GCCCCC               TTTGGAATCCCCCTT  64 256
HER31_RS09770 2111424 .. 2111437 +  -5.3  -2.95139   AATAAATTAACAGAC               GTTAG AAAA CTAAC                TCATTATTAACTAAT  50 152
HER31_RS09780 2113721 .. 2113756 + -22.2   -3.5365   GTGACACAGCCAAAC    CAAAACACCCAGTACA GCAA TGTACTGGGTGTTTTG     TTATGTCAAATTTAG 100 333
HER31_RS09835 NONE
HER31_RS09840 NONE
HER31_RS09845 2130056 .. 2130073 +  -8.4  -5.03314   TATTAAAATCATTAA             CGCCAC ATAACC GTGGCG              TTTTTTCAGGCTAAC  91 50
HER31_RS09850 NONE
HER31_RS09855 2132025 .. 2132047 + -13.4  -3.61468   ACACCTAGGTGCAAA           CGGCTCCCAA TAA TCGGGAGCCG           TTAATTTAGTTGAAA 100 40
        sbcD NONE
HER31_RS09870 2138109 .. 2138134 + -15.5  -5.08601   CCCGCCCAATCAAAA         GTGCCGAGGCA TCGC TGCTTCGGCAC          TTTTTGTTGAGCTAA 100 261
HER31_RS09890 2140357 .. 2140391 +    -5  -3.04248   TCAGGTTATACATCA     GCCCTTCATTGG AAAAGATAAAA CCGATGATGGGC     TGTTGCAGGGTGTTG  51 75
HER31_RS09900 2141676 .. 2141693 + -12.7  -5.24531   ACAGCCATAAAAAAA             GCCACCG CATG CGGTGGC              TTTTTTGTCGCAGCT 100 157
        folD 2152338 .. 2152361 + -16.8    -3.922   ACACAGCCTAATAAA          GAGGCCAGTC AATT GACTGGCCTC           TTTGGTTCGAGCTTT 100 342
HER31_RS09960 NONE
HER31_RS09965 2155236 .. 2155259 +  -5.3  -2.52516   TTTAACCCTTGTATA          TGCAGCTAA AGCGTA TTAGCCGCA           GTTACTCATAAGGCC  48 36
HER31_RS09975 2157114 .. 2157130 +  -7.9  -2.80816   GGGGGGGAATTCCAA              AGGGAGC GAA GCTCCCC              TCTAATGCATACGAG  60 355
        mnmC 2170794 .. 2170808 +  -3.4  -3.57144   TACTTAGATGTAAAA               GGCTTC AAC GGTGCC               TTTACGGGTAAGCAG  51 158
        dinG NONE
HER31_RS10105 2191183 .. 2191195 +  -3.3  -2.83449   TATCGCCGCCAAGCT                CGCTT GGA ATGCG                TGGTTATGAAGCTAT  43 4
HER31_RS10110 NONE
HER31_RS10115 2192667 .. 2192699 + -17.2  -4.84359   AGAACCTGTAATCAT     CAACGTCAGCCGAGC TTTT GCTCGGCTGAC-TTG      TTTTTATCACGATGC 100 30
HER31_RS10120 NONE
HER31_RS10125 NONE
HER31_RS10130 NONE
HER31_RS10135 2195116 .. 2195132 +  -2.9  -4.18506   TGTATCGATCCGTTA              CCGGC CTGTGCC GTCGG              TTGTTTTGGCCATAA  58 56
HER31_RS10140 2195821 .. 2195837 + -13.7  -4.41956   GGCCTTTAACCTAAA              CGGAGCC ACT GGCTCCG              TTTTCATATCTATCT 100 32
HER31_RS10145 2196589 .. 2196622 +  -6.7   -3.9644   ATTACCGCTATCAAG     CTGTAATTGGCGCGC AACT GCGGCCCAATTATGG      TTATTGTGTTGCAGC  67 82
        norV NONE
        norW NONE
HER31_RS10165 2201300 .. 2201315 +  -2.6  -3.02043   TGTTCAACAGCAAGC              GATAAA ACAG TTTGTC               TATTGGGGACACCTT  43 21
        gndA 2202970 .. 2202981 +  -3.6  -2.51738   TATCACCACTGGCGA                GGCC AATC GGTC                 ATTGCTGAGGTTATT  42 106
HER31_RS10175 2203205 .. 2203219 +  -2.1  -2.55544   CGGGCGTGGTTACTC              TG-GCG CCGC CGCTCA               TAAATTGCATCATAA  39 8
HER31_RS10180 2207167 .. 2207185 +   -16  -4.25104   GCTTCAATTGAATGA             CCTCCGGC AGC GCCGGAGG             TTTTGCTACAAGCGG 100 103
        smrB 2212788 .. 2212808 +  -6.1  -3.11634   CAACACCTGCACCTG            TGGTTGTGC TTG GCACAGCGA            TTCAATCATCTGCCA  53 260
HER31_RS10220 2216177 .. 2216222 +  -2.1  -3.08813   ATTTTTTAACCCGCG GGAATAATCAGAATGAAAATAT GGG GTGTTGT-AGTCTGGTTATTCC TCTGTTCAAGTGCGC  42 122
HER31_RS10225 2220696 .. 2220714 + -11.6  -3.60475   TTCTTGTATGCATTA             GGGGGGAG CTT CGCCCCCC             TTTAGAGTCCCCCTT  87 273
HER31_RS10240 2224824 .. 2224834 +  -2.6  -2.77598   GAAAGAATTTGGCAG                 TATT TCC AATA                 ACTTTTGTTTTAAAA  41 14
HER31_RS10245 NONE
HER31_RS10250 2226742 .. 2226752 +  -5.4  -2.61582   CTAGAACAACAGTGG                 CAGA AAC TCTG                 GTTATGAATCCGCTA  50 8
HER31_RS10255 NONE
HER31_RS10260 NONE
HER31_RS10265 NONE
HER31_RS10270 2231735 .. 2231767 + -10.5  -2.72829   TCAACAACTAGCACC      ACAACTGCTGCCTGC AGT GCAGGCAGCAGTGAC      CTTTAAGCGGGTGTC  71 30
HER31_RS10275 NONE
HER31_RS10280 2233511 .. 2233527 + -11.5  -3.57263   AGCAGATGTAACAAA              GCCCGCG TAA TGCGGGC              TTTGGAACTAGGCAT  87 465
HER31_RS10295 2235631 .. 2235641 +  -3.2  -3.19389   CCCTTATTACTGCTG                 TGGC AAC GTCA                 TTGATGCGTAACTTG  46 475
        putP 2237699 .. 2237718 +   -10  -4.71426   TGGACGATTAACAAA            TGAGGCGC AATT GCGCTTCA             TTTTGTTAATGGCAA  91 42
HER31_RS10310 2239256 .. 2239273 + -11.3  -5.22039   TAGTGGCAACAAAAA             GGAGACC ATAG GGTCTCC              TTTTTTGCGTTTAGC 100 48
HER31_RS10315 2239894 .. 2239910 +  -9.3  -3.60475   TATCTTTAGCCTTAG              GGGGAGC TTC GCCCCCC              TTTGGAATCCCCCTT  75 71
HER31_RS10325 2243079 .. 2243103 + -18.7  -5.60864   TCATGCTAGAAAAAA          TGGCGCTAACC AGT GGTTAGCGCCA          TTTTTTTGCTGTGTC 100 57
HER31_RS10330 2243734 .. 2243748 +  -2.1  -3.71848   ATTTAAAGACTTTAT              CGGCAG TGAT CT-CCG               TTATTAGTCAGCAGC  51 4
HER31_RS10335 2245013 .. 2245049 +  -6.7  -3.60419   AAAGAATTTACTCAC    TAGCAGCAATTGAAATT ATC AATATCAATTGCTGAAA    TTCTACTTTAGGCAT  64 63
HER31_RS10340 2247610 .. 2247629 + -12.2  -5.30155   GCTCGGCAATCCAAA            GGAAGGAC ATTT GTCCTTCC             TTTTTTAGTTGGTAC 100 110
        flgA 2262485 .. 2262505 +  -3.3  -2.99704   GATTATCGCCGTAGG            TAAAGTAGA AGT TCAGCTTTA            ATTATTTCCTAAAGG  45 4
        flgM NONE
HER31_RS10425 2263357 .. 2263374 +  -5.5  -6.09133   TGCTAACCAAAATAG             CGGTCCT TACG AGGGTCG              TTTTTTTTTAGGCTG 100 60
HER31_RS10440 NONE
HER31_RS10445 2266256 .. 2266266 +  -2.6  -4.94992   CACCACCAAGTGACT                 TAAA ATA TTTA                 TTTTTATCCATTTAG  70 39
HER31_RS10460 2270435 .. 2270457 +  -4.9  -3.02144   TTAAATAGCACCAAG           GAGTGAGCA ATGGC TGTTTACTC           TATTGAGCAAGGTAC  51 37
HER31_RS10465 2270975 .. 2270987 +  -9.1  -2.87963   GACAACAAAGTAGAG                GCAGC TGA GCTGC                TGTAGTGCTTATCGA  67 49
HER31_RS10470 2271655 .. 2271667 +  -2.7  -3.66908   TGGGAACAACAATGA                CAAAT CCC GTTTG                TTAATTTTAAACAAA  52 121
HER31_RS10480 2275227 .. 2275253 +  -8.8  -3.31144   GAATCCAGCCCCTGA         GCAGGTACAA CATCAGC TTGTGCCTGC         TTCTGCCCATCAACA  67 249
HER31_RS10495 2279701 .. 2279722 +  -7.2  -3.26471   ATAAACCGGCCAGTA           GCGGACGG GCGAGA CCGTCCAC            TTCATCTCCGGCTAG  62 40
HER31_RS10500 NONE
HER31_RS10505 2281547 .. 2281566 +   -15  -4.31835   TGAATCAAATAAAAA            GGGCTGCC ATTT GGCAGCCC             TTTATTATCAACATT 100 83
HER31_RS10510 2284109 .. 2284135 + -12.3  -4.35116   TAATTGATTTATAGA         GGCCCTAGCGA GCTAA TTGCTGGGGCC         TTTTAATCTAGACTA 100 60
HER31_RS10515 2285237 .. 2285261 +   -13  -3.14344   GATAGTATTGCTTAA          TCACCTCAGT AACTC ACTGAGGTGA          TTAATAAAACGGCTA  91 36
HER31_RS10525 2287397 .. 2287419 + -13.5  -4.65168   CGATAAACACAAAAA           GCGGCAAGT TAAGC ACTTGCCGC           TTTTTAGGCTGTAAT 100 46
HER31_RS10535 2292134 .. 2292155 + -14.5  -2.71011   TCAATACCTTAGCCA           GTGGCTCTG GTTC CAGAGCCAC            TGCTTCAACAGCAAT  87 42
HER31_RS10540 NONE
HER31_RS10545 2293816 .. 2293835 +  -2.1  -3.70139   CGCCTGTCCAGATCT            CGC-CGGT AATAA ATCGAGCG            TCTTTATTGAGCTTG  50 213
HER31_RS10555 2295017 .. 2295033 +  -9.5  -2.61144   CTGTAGTCTCACCTA              TACTAGC TCT GCTAGTA              GTCTTTGAAAAATAG  68 68
HER31_RS10565 2297192 .. 2297215 +  -2.4  -3.23853   CATACTCCAGCGGAA          TGACCACCAA CATT TTGTTGCTCA           TGTTCATTAAACAAA  44 23
HER31_RS10570 2297694 .. 2297709 + -10.4  -4.41137   ACTAACTTAACCAAA              GCCCAC TTCG GTGGGC               TTTATTATGGTTGTG  87 50
HER31_RS10575 2299007 .. 2299022 +  -4.6  -5.06451   GGCCGGTGTTACCGC              CAAGGC GATT GCCCTG               TTTTTTAAGCTGCTG  80 340
HER31_RS10605 2307262 .. 2307276 +  -5.6  -4.46073   TGGCGCAAGAGCGAG               GTCGCC TCT GGCCAC               TTTGTTCTGTTCCAC  71 347
HER31_RS10620 2309169 .. 2309197 + -19.7  -3.58905   GTTGTTATTAACGAA        CAAAGCCCGAGTG AAT CGCTCGGGCTTTG        TTGTATCTAAAACAT 100 49
HER31_RS10625 2310710 .. 2310728 +  -7.4  -2.52742   ACCGTGATATTTTAC             CAGCGACT TAT AGTCGGTG             ATCTTATGCAGCAGT  55 460
HER31_RS10640 2314062 .. 2314088 + -13.8  -3.48772   ACTTCCCCCTCCCAA         CCGAGCCGGATT TTC AATTCGGCTTGG         TTCTCTAGCCCACTT 100 50
HER31_RS10645 2316776 .. 2316791 +  -4.7  -2.58544   GGCGCGAATGGTTAG              TCAGC ATCAAA GCTGA               GTTCTAACAATGACG  46 3
HER31_RS10650 NONE
HER31_RS10655 NONE
HER31_RS10660 NONE
HER31_RS10665 NONE
HER31_RS10670 2320215 .. 2320234 + -12.2  -4.82901   CCAATGAGATAAAAA            GAGAGCTG AATT CAGCTCTC             TTTTTATAGCCACCA 100 34
HER31_RS10720 2332530 .. 2332542 +  -3.3  -2.96329   CACAAATGAACATTT                GGGTG AAA CACCA                TGATTATTGAATTAA  44 140
        wecA 2333762 .. 2333778 + -15.1   -4.2679   CTCCCCTCTCCCAAA              CGCCCGC ACC GCGGGCG              TTTTGCTGCCAATTC 100 178
HER31_RS10730 2334320 .. 2334333 +  -5.9   -2.9583   AGGCTGGGAACGACT               GGGGC TTCG GCCTC                TGCTTTGACTACTTG  51 198
HER31_RS10735 2335863 .. 2335873 +  -3.2  -3.04398   TTACCGTTTATTTAA                 CGTC ATT GATG                 ATTTTCGGCGAGAAG  45 248
HER31_RS10815 2358576 .. 2358602 + -14.5  -5.74288   CTGATTGATTCAAAA         GCCTCAATGCG ATAAC CGCATTGGGGC         TTTTTTGTTGTTTAT 100 73
HER31_RS10820 2360454 .. 2360469 +    -4  -3.07259   TTGTTAATCTACCAA              TCCAAA CCCT TTTGGG               CTTTTACGCCTGCTT  47 218
HER31_RS10830 2362145 .. 2362157 +  -3.4  -3.29144   CTGCCAGCCCCAAAC                GTGT ATCCC ACAC                TTGTAGGGGCACTCG  48 470
        metH 2366509 .. 2366524 + -10.4  -4.90266   CCCCAAACGAAAAAA              CCACCG CATG CGGTGG               TTTTTCATTACTGAG  93 251
HER31_RS11040 2408679 .. 2408695 +  -5.1  -3.59262   GTTAACTCCGCCACC              GATAACC GTT GGTAATC              TTTGGCAATGTCACC  56 523
HER31_RS11055 2410587 .. 2410604 + -14.1  -5.45652   GCAGCAAATATAAAA             CGGCCGC ATAT GCGGCCG              TTTTTTGTTACAAAT 100 45
HER31_RS11060 NONE
HER31_RS11065 2415358 .. 2415377 +   -10  -4.23758   TTAGGTTAATGTAAA            CGGAGCTA TTTA TGGCTCCG             TTTTCGATCTGAGCT  85 369
HER31_RS11070 NONE
        tsaA 2416739 .. 2416776 +  -9.7  -2.50816   GCACCGCTTTGGTCA   CGACGCTCCCCATGCCG ATGA CGGCGTGGGCACCGATG    GTTACTCCATCACAG  64 282
HER31_RS11085 2419243 .. 2419262 +   -15  -3.97043   TCAACCCGCTGCAAA            CGCCGCTC ATAT GAGCGGCG             TTGTTGTATGTTCAA 100 54
HER31_RS11090 2420946 .. 2420960 +  -2.7  -3.09834   GCTGATCCGTGTTTT               GCCGC GTTTG GCGCC               TTCAATGGTAACCTG  44 174
         map NONE
        glnD NONE
        dapD 2449283 .. 2449304 + -15.9  -5.35459   TCAAAGACACAAAAA           TGGCGAGCC AATC GGCTCGCCA            TTTTTTATGCTCTAT 100 57
HER31_RS11225 NONE
HER31_RS11230 2456550 .. 2456566 +  -9.3  -3.61922   TTCTTGTATGCATTA              GGGGGAG CTT CGCCCCC              TTTGGAATCCCTCTT  75 328
HER31_RS11245 2459448 .. 2459464 +  -5.1  -3.58343   GTGGCCAAACTCACC              CAATCTC AAT GAGTTTG              TTTGGCGCTGCTAAA  57 14
HER31_RS11250 NONE
HER31_RS11255 2461906 .. 2461919 +  -5.3  -5.34555   CTGGTCAGTTATGAC               CCTAA TCCG TTAGG                TTTTTTCTAGTATCG  87 2
        queF 2463487 .. 2463519 + -11.4   -2.8474   AGTCGTTAGTTTGCC      GGTACAGCAGAGCT ATGAA AACTCTGTTGTACC      TCATTATAAGTGAGG  78 40
HER31_RS11275 2466282 .. 2466303 + -14.5  -5.06414   GAGTACGACGACCAA           CGCCAGCTA TCCG TAGCTGGCG            TTTTTATTGAAGCGA 100 52
HER31_RS11280 2466911 .. 2466928 + -11.3   -5.4492   CACAGCCTAAAAAAA             CGAGAGC ATCT GCTCTCG              TTTTTTGTATCTATC 100 284
HER31_RS11290 NONE
HER31_RS11295 NONE
HER31_RS11325 2478249 .. 2478270 + -15.9  -4.72986   GCCGCTCTAACAATA           CGGGGACTC AATC GAGTCCCCG            TTTTTAATGGCAATG 100 47
HER31_RS11335 2480887 .. 2480904 + -12.7  -5.88565   GCCTGACACAAAAAA             CCGACGC CAAG GCGTCGG              TTTTTTTATTGTGCG 100 89
HER31_RS11375 NONE
HER31_RS11380 2491306 .. 2491319 +  -9.5  -4.10657   CACTGCAAAGAGTAA               GGGCC TAAC GGCCC                TTTTGCGGACTGTGC  81 50
HER31_RS11385 2492023 .. 2492044 + -12.3  -5.08824   CAATAAATACAACAA           TGGCGTGCT TAAG GGCACGCCA            TTTTTTAACTCAGCC 100 74
HER31_RS11405 2496790 .. 2496808 + -10.3   -5.4182   CCTGCTCGTTACCAA             TCCCAGC TTCGC GCTGGGA             TTTTTGTTTATGGTT 100 55
HER31_RS11425 2501972 .. 2501986 + -12.8   -2.7263   TTCTTGTATGCATTA               GGGGGC TTC GCCCCC               CTTTGGAACCCTCCT  82 152
HER31_RS11445 NONE
HER31_RS11450 2508145 .. 2508164 +  -3.6  -3.09749   TGATGAAGACACCGT            TTACTCGT TGGG ACAAGTAA             TCTGTGTTCACGCTG  45 6
HER31_RS11455 2509650 .. 2509662 +  -6.3  -3.28712   TTTATCTCGAACTTA                GAAGT TTT ACTTC                TTATAAAAAACGAAA  59 206
HER31_RS11460 NONE
HER31_RS11465 2511998 .. 2512021 +    -6  -4.83518   AAGTTCTCCCTGATT          AAGGGGTTAG AGGT TTAACCCCTA           TTTTATCTTATTGTT  80 57
HER31_RS11470 NONE
HER31_RS11475 2513897 .. 2513916 +   -15  -4.13767   GGCAGCTACAAAAAA            GGCACCGC TAAT GCGGTGCC             TTTTGAACTGCAAAG 100 146
HER31_RS11490 NONE
HER31_RS11495 2520156 .. 2520179 +   -11  -4.26188   GTCTTAACCTTATTA          CTACGCCCAC TCTG GTGGGCTTAG           TTTTGGCTGTGTACC  88 34
HER31_RS11500 2521750 .. 2521763 +  -8.1  -4.30014   ACCAAACCAGGCACC               TGGGG TCAA CCCCA                TTTTCGCTTGCTCAA  79 281
HER31_RS11515 NONE
        srmB 2526960 .. 2526994 + -20.2   -3.9093   AAAACTGCATTTGAA     AACGAGGGCCTATTTC GAT GAAATAGGCCCTCGTG     TTATTGTGTCGTCAA 100 59
HER31_RS11525 2529446 .. 2529482 + -16.2   -3.4052   TTAGTTGCTACACAG   CC-TAAAAAAAACCGCC AAAT GGCGGTTTTTTTTATGG    TTAATTAGCTTAAAA 100 265
HER31_RS11550 NONE
HER31_RS11555 2535447 .. 2535476 + -21.5  -3.80625   CAGCATCAGTTAAAA       CAGGCCGCCAGCG CTCT CGTTGGCGGCCTG        TTTGGGTTATAACGG 100 42
HER31_RS11560 2536262 .. 2536289 +  -2.1  -4.59773   TCTTTTGCATTTCAC        CG-AGCATTTTG ACCAA CAAAATACTGCG        TTTTTCACCATCAGG  65 157
HER31_RS11590 2543239 .. 2543260 + -17.3  -4.11664   ATTATCCGATACAAA           CAGGGCGCC TAAC GGCGCCCTG            TTTCATTATTGTAAA 100 59
HER31_RS11615 NONE
HER31_RS11620 2549282 .. 2549300 + -14.6   -4.7629   TTCCTGCTCGCTCAA             GCACAGCC AGT GGCTGTGC             TTTTTAGGTTACTAC 100 56
HER31_RS11625 2550368 .. 2550392 + -11.7  -3.43049   ATGAAAAAACATCAA          CTAATGTTTAA TAT TTAAACATTAG          TTCATTCAATTATTA  88 317
HER31_RS11630 2551118 .. 2551132 + -11.4  -4.70659   CTGTTTTATTGTAAA               GCCAGC CTT GCTGGC               TTTTTGACTATCCAA 100 90
HER31_RS11635 NONE
HER31_RS11640 NONE
HER31_RS11645 NONE
HER31_RS11650 NONE
HER31_RS11655 2556757 .. 2556770 +  -5.3  -4.09739   GATCTGGCAGGATAA               TCGTA GCGA TACGA                TTTTAGGAGCATTGC  63 102
HER31_RS11660 2557709 .. 2557729 + -16.9  -4.93547   CCACTTAAAACAAAA            CCGCAGCTC TGA GAGCTGCGG            TTTTTCGTTGCTTCG 100 111
HER31_RS11705 NONE
HER31_RS11710 2568906 .. 2568933 +  -8.4  -4.78149   CACAGCCTCAAAAAA        GCCTCCATCGTT ACCC ATCGATGGAAGC         TTTTTCAGTTATGGC  89 369
        nadB 2580094 .. 2580111 +  -5.5  -3.61517   ATCGTCGCTGGTAAG             CAGCCGT TCAA ACTGCTG              TTGTTCGCCACGACT  56 503
HER31_RS11795 2585227 .. 2585256 + -10.1  -3.68725   GTTCGCTCAGTCAAT       TAAGCGAGGGG ATTTACGC TCCCTCGCTTA        TGTTTGTTAGCCCTT  78 46
HER31_RS11800 2586242 .. 2586259 + -11.3  -6.09888   AACCAAAACAAAAAA             GAGAGCC AATT GGCTCTC              TTTTTTTTATTGCAG 100 39
        mutH 2591223 .. 2591233 +    -4  -2.71924   GTTTTCAGAAGTAGC                 GAAA TTT TTTC                 CTTTGCAGACAGGTC  45 140
HER31_RS11825 2592469 .. 2592481 +  -3.3  -2.53876   TCGCCATTTGTGGCA                GGAAC GTC GTCCC                TAGCTTCGAATCCAC  42 155
HER31_RS11840 2595634 .. 2595645 +  -4.4  -2.89482   GAACTGTTTTCCAAA                CAAG TTGC CTTG                 GTTATTCGTTAGCTT  48 109
HER31_RS11845 NONE
HER31_RS11850 2596644 .. 2596655 +  -4.4  -2.72829   CAAACTCGCCTCTCC                CATC CAGA GATG                 CTTTAAGGAGCTATG  47 8
HER31_RS11855 NONE
        queG 2598813 .. 2598824 +  -4.4  -3.05463   GAGACGCTTAAGTTC                CCTT GAAT AAGG                 TTGCCTAAGCGGACT  49 30
HER31_RS11875 2601593 .. 2601603 +  -3.2  -3.36655   TGAAACATGCCATTA                 CAGT CAC GCTG                 TTAATGTCTGTGTGC  48 109
HER31_RS11880 NONE
HER31_RS11885 NONE
        nrfD NONE
HER31_RS11895 2603990 .. 2604013 + -16.8  -4.43681   TAGATAACAAAAAAA          CGCCAGTCAG AAAC CTGACTGGCG           TTTTGCTATTGGGTC 100 64
         nfo 2606731 .. 2606745 +  -4.2  -4.36914   TTGCAAGCAGCTCGA               GCCAAT AAA AATGGC               TTTTGTCGCACCAAC  64 452
HER31_RS11995 2618522 .. 2618540 +  -7.5  -3.62572   TTAAAGGCTGTGTAC             CAACAAC TAAGT GTTGTTG             TTTCCAATGCTGGTA  67 515
        aceK 2626591 .. 2626601 +  -3.2  -3.45324   GATAGGCTTTGATCC                 CGTA AGA TGCG                 TCTTTAATCCCAATA  50 69
HER31_RS12025 2627257 .. 2627273 + -10.8  -5.38549   TTTGCTTATAACGAA              GCCCGC CTAGT GCGGGC              TTTTTGTTGTTTGAG 100 52
HER31_RS12030 NONE
HER31_RS12035 2629287 .. 2629311 + -16.5  -2.84801   GCAGCGCTAAACGAA          CAACGCCCACG TAA TGTGGGCGTTG          TAGTATTTACCGCTG 100 43
HER31_RS12070 2634180 .. 2634196 +  -9.3  -3.76952   GTTTGTATGCATTAG              GGGGGAG CTT CGCCCCC              TTTGCCTTAGGTCGC  77 182
HER31_RS12075 2634966 .. 2634983 + -11.3  -4.67011   ACTAGAAAGCAAAAA             GCCTGAC CGAA GTCAGGC              TTTTTAGATCAAGTT 100 265
        ettA 2650401 .. 2650418 + -11.3  -5.18561   ATTCGCCAAACAAAA             CGCACTC ATTT GAGTGCG              TTTTTTGCATCTTTA 100 53
HER31_RS12155 2651533 .. 2651551 +  -8.8  -3.04144   ACAGGCCAAGCTTAA             GCGGCATT ATT AACGCCGC             TGTTAAGGCTCCAGC  66 64
        leuS 2655494 .. 2655532 + -19.8  -3.64703   CACCGCATTTTCAGG   CTGTGGCTATAACGATTG CAA CAGTCGTTATAGCCACCG   TTTGAATAAACCACC 100 107
HER31_RS12175 NONE
        holA NONE
        nadD NONE
        rsfS NONE
        rlmH NONE
        mrdA NONE
        rodA NONE
        mltB NONE
HER31_RS12215 NONE
HER31_RS12220 2664706 .. 2664733 + -13.6  -3.39068   AGCAACTTATTGATA        TAAAAGGCCATC GCTC GATGGCCTTTTG         CTTTTGTTGAAATAG 100 61
HER31_RS12225 2665083 .. 2665100 +  -7.1  -3.54459   CGTAAAGGGCGTACT             TTAACGA ACAA TCGTTAA              TTTACAGCAGATTGC  65 22
        lipB NONE
        lipA 2666869 .. 2666898 + -20.9  -3.76492   AGGTTTCGAGCTAAA       CAACAAACCCGCC AATA GGCGGGTTTGTTG        TTTCATAAACTTGAA 100 51
HER31_RS12250 NONE
HER31_RS12255 NONE
HER31_RS12260 2670979 .. 2670992 +  -3.8  -2.92102   TTACAAACTCGACTA               GGTG CAACTC CACC                ATTTCTGCACAATCT  46 25
HER31_RS12265 2671322 .. 2671336 +    -7  -3.21747   GTGCAAACCAGACTC               CGCCCC AGA GCGGCG               TTAATCCTAGGCTGA  59 7
HER31_RS12270 2672161 .. 2672213 +  -4.1  -2.64794   ACTCGCGGTTAATCT AGGCGTTAACGGTTGAGTACGGCGC AAAGA GCGC-G-GCTCAACCGTCATGGCCC TACTCTGCACTTCAA  44 29
HER31_RS12275 2673126 .. 2673138 +  -7.7  -4.19817   CGTCATTATCAACTA                TGCCT GTC AGGCA                TTTTCAGTCAATAAA  76 471
HER31_RS12285 2675146 .. 2675182 + -13.1  -2.98088   TTTGAGATTATTTGA    ATTACTCCCCTAGCATC AAT GATGTTAGGGGAGTACC    TATCTGGATTTAGAA  86 26
HER31_RS12330 2686104 .. 2686122 +    -6  -2.72661   CCTTTTCCCTGAGCG             GATTACCG ATA TGGTAGTC             TCATTCGGCATCATC  53 225
HER31_RS12335 NONE
HER31_RS12340 2688287 .. 2688314 +  -8.4  -4.08485   TAACCTTCCGCAACA        CGGCAGGCCA CATCAGCC TGACCTGCCG         TTTGATTTCACTCAG  78 138
HER31_RS12345 2689648 .. 2689670 + -13.4  -3.75665   ATTGCAGACACAAAA           AAGCCCGCAC ACT GTGCGGGCTC           TTTCGTAAAATATGG 100 433
HER31_RS12355 NONE
HER31_RS12360 2691590 .. 2691616 + -14.4  -3.19285   TCAGGAGATAAAAAA         TCGGCGCAACCT TAT GGGCTGCGCCGA         TCTCTATTTCAGCTG  95 73
HER31_RS12370 NONE
HER31_RS12375 2695589 .. 2695614 +    -4  -4.52781   TGAAATTTCAATTGT         CACTGCCTTT AGTGAC AAAAGCGGTG          TTTTCATTCTGGTTA  66 183
HER31_RS12380 2698626 .. 2698642 + -13.7  -5.08169   TGCCATCAAAAAAAA              GCCGCTC AAT GAGCGGC              TTTTTTAGGCTGTGT 100 58
HER31_RS12390 2701093 .. 2701107 +  -5.7  -2.84634   GCTTTATGGCGCCCA               TGGTG TTCAT CACCA               TCTCGTCCTGTACGG  51 261
HER31_RS12405 2705599 .. 2705620 + -14.5  -5.46657   CCACGGAAACAACAA           CGGCGTACT AAAG AGTACGCCG            TTTTTTATTACGCTC 100 46
HER31_RS12420 NONE
HER31_RS12425 2709966 .. 2709984 + -10.2  -3.60475   TTCTTGTATGCATTA             GGGGGGGA GCT TCGCCCCC             TTTGGAATCCCCCTT  78 259
HER31_RS12435 NONE
HER31_RS12440 2714457 .. 2714476 + -11.4   -4.2679   GAATAATGTAACAAC            TGCGGCGC TTAA GCGCCGTA             TTTTGATAGGAATTC  93 35
HER31_RS12445 2715284 .. 2715317 + -15.5  -3.47227   TAAAGCTCGAGGTGA     CACCAACCTAACTGT GTAT ACACTTAGGTTGGTG      TTCTCCTCATTACAG 100 50
HER31_RS12465 2719349 .. 2719369 + -13.3  -5.29782   CAGCAACTCCCTATT            GCCGGTGCA GCA TGCATCGGC            TTTTTTATGGCTGTG 100 43
HER31_RS12470 2720714 .. 2720735 +  -2.1  -3.98256   GTTTATTACCCCAGT           CAGTGACCA GAAG TGGCCGCGG            TATTTTTGCTGCGGA  55 273
HER31_RS12480 2722264 .. 2722278 +  -4.3  -3.61715   AAACTGCATCAGATG               CATCA ATAGC TGATG               TTGTTAAGCCACGTC  55 13
HER31_RS12485 2723174 .. 2723192 +  -4.6  -3.00298   GCGACGGTGCCATAG             TAGAGC TTTGCCC GCTCTA             TCTGTAGTTGAGGCA  49 134
HER31_RS12495 NONE
HER31_RS12500 NONE
HER31_RS12505 2727267 .. 2727277 +  -2.4  -3.38564   CAAGAAGTGGCTGAG                 CTGG AGG CCCG                 TTATGGCTAAATTTG  45 5
HER31_RS12510 2728059 .. 2728077 + -12.4  -2.92777   AGCCTAACTCAATGA             GGCGACCG TAC TGGTCGCC             GTTTCCTATATAACA  82 34
HER31_RS12515 2729607 .. 2729632 + -13.3  -5.34309   AGCGCCAGTTTTAAA         GGCCAGTCAGA GCAA TCCGACTGGCC          TTTTTGTTTGGTCGT 100 50
HER31_RS12520 NONE
HER31_RS12530 NONE
HER31_RS12535 2731075 .. 2731095 + -16.9  -2.94045   AATACAAACCTAAAA            GGCCAGCAC ACT GTGCTGGCC            TCGTTATTGCGCTCG 100 28
HER31_RS12545 2733909 .. 2733923 +  -2.9  -3.96892   TGGCACACCAAGGCA               TTGAT ATAAA ATCAA               TTTATACTGGGCATT  54 17
HER31_RS12550 2734763 .. 2734780 +  -2.7  -3.18681   GTCCTGTAACCCAAC             CAGCTTT TCAC AAACCTG              TTGATCAAGTTCACC  46 155
HER31_RS12560 2736144 .. 2736170 + -10.9  -5.51402   AGTTTCATCATCTTT        GGTGCC-CGAGA GCAA TCTCGTGGCGCC         TTTTTTTGGCTGTGT 100 56
HER31_RS12565 2740253 .. 2740275 + -11.3  -5.08169   GGTTAATGACATATC           GGCAGTGCT GTGAA GGCACTGCC           TTTTTTAGGCTGTGT 100 59
HER31_RS12570 NONE
HER31_RS12575 2741664 .. 2741679 + -10.4  -4.81212   CCATTAACGAAAAAA              TCCGGC TTAC GCCGGA               TTTTATTATGGTGGA  91 92
HER31_RS12600 2747166 .. 2747187 +  -5.7  -4.64157   CGTTGCAACAAAAAA           GCGAGCACC TTAG GGCACTCGC            TTTTATGATTATTTC  74 118
HER31_RS12645 2759521 .. 2759550 +  -7.3  -2.73681   AGACTGAAGTTGTCA       GT-TAGGAAAATGC CTT GCTTTTTCCTACAC       TGATTAGGCTCCCTG  58 48
        ssrS 2759783 .. 2759798 +  -6.2  -3.39895   CCTCCTTCGCTTTTT              GTAAGA GAAA TCTTAC               TTACTTCATAAGCAC  59 72
HER31_RS12655 2762418 .. 2762433 +  -2.6  -2.62513   TTAATACCCGCTTCA              TTACAA CTCA TTGTAG               ATTCGTTCGGCTTCT  40 37
HER31_RS12665 2763563 .. 2763590 +  -5.6   -4.4715   TACGCAGGTTGATAA        CGCCAGTATC-GA GGA TCAGGTACTGGCC        TTTTATCCCTTGCAG  71 92
        thpR NONE
HER31_RS12695 2771060 .. 2771085 + -19.1  -4.15222   ATTGAATCAAAACAA         CAACGCCACCC CAAT GGGTGGCGTTG          TTTATTCCCGCGACT 100 167
        sfsA 2773281 .. 2773302 +  -5.9  -3.05877   GCAGGATTAGGGGAT           TTGTTCAGT TTTC ACCGAACAA            TGCTATTTTTGTCGA  52 77
        dksA 2773854 .. 2773886 +  -6.1  -2.82156   GTCGGTTAAGCCGCC      GCTGTGCGGGAGAGT CTA ACTCTCCCGCCCTCA      TCCTTAACTTTGCCT  53 32
HER31_RS12715 2774780 .. 2774792 +  -3.3  -4.13654   ATTGGCCGCGCCGTG                CCGAT GAT AACGG                TTTATCATTTAACCA  57 19
        pcnB NONE
        folK 2776753 .. 2776782 +  -3.5   -3.0636   TCATATTTAGTAACA       AGGCACTAACTCA ATAT TGAAATAGTGCCC        GTTTCTGTCATATAA  45 45
        panB NONE
HER31_RS12735 NONE
HER31_RS12740 2778954 .. 2778971 + -12.7  -4.81685   TGGGGATGCAACTAA             CGGACGC TGCG GCGTCCG              TTTTTGATCCTTGCT 100 48
HER31_RS12785 2787715 .. 2787739 + -18.6  -4.52589   ATCTACCAACAAAAA          CGGCCCGCTC TAAAT GAGCGGGCCG          TTTTCTATGGGCGCA 100 217
HER31_RS12795 2789881 .. 2789893 +  -3.3    -3.889   CATCCATTCGCGCTC                CGCCA CGT TGTCG                TTTGCTGTAATTACA  55 3
HER31_RS12800 2791270 .. 2791290 +  -2.6  -3.40371   GTGGCTCACCCAACC            CTGCTT TTTTCCGGC AAGCAG            TTGATTGATGCAATC  46 132
HER31_RS12815 2794636 .. 2794649 +  -3.7  -3.01712   ACTGGGTTTAGTATG               CCAGC TTGA GCCGG                TGTTAGAGCACCAAG  47 523
HER31_RS12820 2795588 .. 2795621 + -14.7  -3.55622   GACATTACTTTTGAA     ATAACAATGGCAGCC CTTA GGCTGCCATTGTTGG      TTTGGAGCCATTGGC 100 48
        cobA NONE
        nirB NONE
        nirD 2802356 .. 2802384 +  -9.7   -4.2717   CGCAACGTTAACCCT       TCGGCAGCGAAG TGCAAT CTTCGCTGC-GA        TTTTCCTCCGCTGAT  84 30
HER31_RS12845 NONE
HER31_RS12850 NONE
HER31_RS12855 2804963 .. 2804987 + -12.9  -5.04385   CCGCTGGCACGCCAA          GCCCTCGATTT CAC AGGTCGAGGGC          TTTTTTAGGGCTGTA 100 75
HER31_RS12880 2811719 .. 2811740 + -14.5   -4.7497   AACAAGCACTAAAAA           GGCGAAGTC CGAA GACTTCGCC            TTTTTAGTCGATGAA 100 49
HER31_RS12915 2820191 .. 2820205 +  -2.8  -3.79113   AGAAACATTTACACA               CTTGCA GCT TGAAAG               TTATTCTACACAAAT  52 104
HER31_RS12920 NONE
HER31_RS12925 2822541 .. 2822579 +  -7.8   -5.1675   TTTATTGACTTGCAA  GCTGATTTAACTAATGAC TTTAT GTCAT--GTTAAATCAGC  TTTTTTAGTGCCTAA  87 58
HER31_RS12945 NONE
HER31_RS12950 2828387 .. 2828406 +  -4.4  -2.95093   ACACTTAAATAAAAT            TTGATAAG AATA TTTATCAA             CTTTGATTGGCCTGT  48 56
HER31_RS12955 2830168 .. 2830185 + -14.1  -4.82901   GCCGCACTGCAATGA             GCCGCCC ATTA GGGCGGC              TTTTTATGGACACCG 100 54
HER31_RS12960 2830989 .. 2831015 + -11.7  -4.73388   TAGTGCGTTTACAAA         GCCTTGGTAGT CTTTA ATTACCAAGGC         TTTTTGATAAAAATT 100 49
HER31_RS12965 2832506 .. 2832519 +  -4.5  -3.28712   GCCGTTGCCGCAACC               CTGGT GCTT GCCAG                TTGTGGCAGCGACGG  52 428
HER31_RS12975 NONE
HER31_RS12980 2835962 .. 2835975 +  -2.3  -3.49618   TGCCGCCAGCCAAGA               CGGCA CCAT TGCGG                TTGGTTATATGCAGC  47 42
HER31_RS12985 2836399 .. 2836418 +   -10  -3.51406   CACCAACTAACAACA            GAGCCTGC TCCG GTAGGCTC             TTACTATTTCTGATA  77 61
HER31_RS12995 2837938 .. 2837954 +    -3   -3.1739   CCAGCTTCCTCGACT             GATGCAG GCCA CTGC-TC              TTACTCAAATACTGT  45 24
HER31_RS13000 NONE
HER31_RS13005 NONE
HER31_RS13010 2839764 .. 2839776 +  -5.5  -4.81083   TCCTTATGCTGACAG                CGCTA CTC TGGCG                TTTTTCCTCATTAAG  76 110
HER31_RS13015 2840655 .. 2840671 +  -6.5  -4.35044   ACCATTTGTCCCAAA              GATTGGC GCG GCCACTC              TTTATCTTTAGCTGC  74 224
        lpxL 2844660 .. 2844680 + -11.3  -3.38786   CCAAGAGGGAACCCG            CGATAAAAC TGA GTTTTATCG            TTAATCTTGGCTATA  83 1
HER31_RS13050 2847333 .. 2847368 +   -25  -3.03159   ACGCTAACAGATACA    GCAAAGAGGGCTAACC GCAA GGTTAGCCCTCTTTGC     TGTTACGCCAATTGA 100 42
HER31_RS13060 2851311 .. 2851336 +  -6.3  -3.09015   CTAACGGTTTAAGTT         GTTCTATTTTA TCGT TAAAATAGCAC          TTAACTAGATGTAAC  56 37
HER31_RS13065 2851869 .. 2851895 + -10.8   -3.7941   CCAAGCCGTTAATAG         CGCCAGTTGGGT CAA ACCATACTGGCG         TTGTTGTAACAGCTC  80 57
HER31_RS13075 2853632 .. 2853649 +  -4.1  -5.54192   GATGCTGGCTCGTTC             CTAACCG TCTG CGGTTAA              TTTTTTTAGGTTCAT  88 22
HER31_RS13080 2854971 .. 2854985 + -11.4  -5.73339   TCACTAAAACGAAAA               GGGGCT ATT AGCCCC               TTTTTTTGTGCTTGT 100 49
HER31_RS13085 2855707 .. 2855724 +  -9.8  -5.14563   AGTTATCATCCCAAA             CGGCGC CACTGT GCGCCG              TTTTTTGATCCCGCC  93 55
        putA 2859082 .. 2859103 + -17.3  -4.27316   CAGCTTGCAAAAAAA           CGGCCGCAC AGAT GTGCGGCCG            TTTTGGCTTGCACCG 100 49
HER31_RS13105 2863101 .. 2863124 + -18.2  -2.93585   AGGGTGTAAACCCAA          CAGGGCAGCC AATT GGCTGCCCTG           TCATTTAAACTCTAA 100 32
        plsY 2866031 .. 2866041 +  -2.4  -4.37658   GTAATCCAGGCCCAT                 CAGC TTG GCGG                 TTTTATCGAAGGCTT  60 504
        rpsU NONE
HER31_RS13140 2867420 .. 2867444 + -15.8  -4.61852   GCCCGATCACAGCAA          CAAGCCGTGC CTAAT GCACGGCTTG          TTTGTTTGTGCTATT 100 49
HER31_RS13145 2869380 .. 2869394 +  -7.2  -2.66034   AAGGCTAGCGGCATG               TAACGA ACA TCGTTA               TACTATGGCGTTTGT  57 51
        rpoD 2871340 .. 2871359 + -13.6  -5.01546   AGTTCAACAAAAAAA            TGCCCAGC ACTA GCTGGGCA             TTTTTATATCGGTTT 100 76
HER31_RS13160 NONE
HER31_RS13165 NONE
HER31_RS13170 2875053 .. 2875069 +  -9.4  -3.66288   GCTGGGTACAAAAAA              GCAGCC ATTAA GGCTGC              TTCTGTTACCGGGTA  77 377
        tolC 2886431 .. 2886465 + -16.7  -3.70037   GGTTAACCGCGGATA    CG-AAAAGAGCCAGTC AATC GACTGGCTCTTTTGCG     TTTAGGTGCTCGTTA 100 47
HER31_RS13255 2888823 .. 2888850 +  -8.5  -3.28712   CGCCAATGTCTTAAT        CCGATTGCCACT ACAAC AGTGGCGA-CGG        TTATGAGGAACGACA  64 88
HER31_RS13280 2892771 .. 2892792 + -14.5    -4.371   CTCACCCATCACAAA           GCCCAGCAA TAAC TTGCTGGGC            TTTTACTATGATAAG 100 56
HER31_RS13285 2894075 .. 2894093 +   -16  -4.98522   ATTGATTAGCACTAA             GGGCAGCC AAC GGCTGCCC             TTTTTATATCGAATT 100 46
HER31_RS13290 2895233 .. 2895245 +  -5.5   -4.5442   TCAACCATATTGAGT                TCCTG AAT CAGGG                TTTTGTCCTTCGGAA  71 280
         udp 2911807 .. 2911838 + -14.6  -3.37915   AGAAGATTCACAGCA      ACAAAAAAGGGCTC AAAC GAGCCCTTTTTTGA       TCTTACTTTATAGAG 100 40
HER31_RS13380 2916383 .. 2916414 +   -14  -3.29144   TCTCGTGTTCAGATA      C-AAAAAAACCAGCC GAT GGCTGGTTTTTTTAG      TTCTAAGCGAAGTGG 100 51
        yjjX 2921390 .. 2921427 +  -7.7  -3.84406   GCTCCCATTAATGAA   GCAGAGATTGCGGTAGCG TAG CGCTACCGCAATAAA-GC   TTATTCTGCTGGGCG  71 388
HER31_RS13410 NONE
HER31_RS13415 2925877 .. 2925899 + -13.5  -4.63486   TGTGGATACCAAAAA           CGGAGCACT CAATA AGTGCTCCG           TTTTGTTAACCGCCT 100 51
HER31_RS13430 2929410 .. 2929424 +  -4.2  -2.84276   TGTCGCAGTGTTAAG               CCTCGA CGC TCAAGG               TAGTTAGTTAGCACT  45 226
HER31_RS13445 2935905 .. 2935924 + -13.6  -5.42259   GGTTAACAGCATTAA            GGCACGGT ATTT ACCGTGCC             TTTTTTTCCAACTAA 100 48
HER31_RS13450 2937228 .. 2937255 +  -8.4  -4.46854   GGTATTTTTTAATTA        ATGGGGCACG AAATTAGC CGTGCCCCAG         TTTATTATTAACTAC  87 116
        rapA 2941785 .. 2941817 + -17.1  -3.21416   CGTTAGCCATCGCTA      CTGAAAAGGGGTGCC AAT GGCACCCCTTTTTTG      TTAGTGATAACGGTA 100 45
        mgtE 2943461 .. 2943480 +  -9.3  -5.29782   GCCGCCAACAAAAAA            GGAGACG TTTTAC CGTCTCC             TTTTTTATGGCTGTG 100 48
        lptD NONE
        surA NONE
        pdxA NONE
        rsmA NONE
        apaG NONE
HER31_RS13525 NONE
HER31_RS13530 2958696 .. 2958729 + -16.1  -3.02511   ACGACGCAGTCAATC     CCAAACGGCCCAGCT CGAT AGCTGGGCTGTTTGC      TATTCGACACATCGC 100 42
        ispB 2962530 .. 2962543 +  -9.5   -5.7827   AGTCACCACAATCAA               CGCCC GTTA GGGCG                TTTTTTGTTTCTATT 100 144
HER31_RS13560 NONE
HER31_RS13565 NONE
HER31_RS13570 2967098 .. 2967118 + -12.7  -3.67602   AACTAAGCAAAAAGC            CGCTTATTG CTA CAATAAGCG            CTTTTTTGACTCTGT  95 204
HER31_RS13575 NONE
        astA NONE
        astD 2970957 .. 2970973 + -13.7  -4.58663   AACCTCTCTATATAA              GGCTGCC TCT GGCAGCC              TTTTTCAACGATAGT 100 40
HER31_RS13590 2971834 .. 2971847 +  -8.1  -5.55769   GTAGGCACAAAAAAA               GCACC CTAA GGTGC                TTTTTTGTTATGCGG 100 51
HER31_RS13615 NONE
HER31_RS13620 2977115 .. 2977134 + -13.6  -5.10208   AGCCTAAAGCAAAAA            GGGTAGCC AAAT GGCTACCC             TTTTTCTTGAGCTTA 100 34
HER31_RS13635 2979779 .. 2979803 + -18.7   -4.6644   AACTCACTAGAACAA          CAAAAGGGGCC AAC GGCCCCTTTTG          TTTTTGCAGTATGTT 100 39
HER31_RS13660 2983466 .. 2983482 +  -6.5  -2.53015   CACAACCTTGACGTC              ATCGCCA CGC TGGCGAA              TAGCTTGCAGGGTAT  52 403
        nrfA 2986944 .. 2986960 + -13.7  -5.29782   TGGTTCGATTATCAA              GGCAGCC TAT GGCTGCC              TTTTTTATGGCTGTG 100 50
HER31_RS13680 NONE
HER31_RS13685 2989095 .. 2989122 + -18.6  -3.58726   TTTCGCCTAGCTTAC        CAACACGCCTAC CGCT GTAGGCGTGTTG         TTGTATCTAGCGCCG 100 50
        argR 2991242 .. 2991263 +  -5.8  -5.24531   CGCTAGATACAAAAA           CGCCTAAC GATTAA GTCAGGCG            TTTTTTGTGGCAGCT  83 57
HER31_RS13830 3019774 .. 3019799 +  -2.6  -5.75599   TCTTGGCCTAGGAAA        GCAGCGTTAACC CACA GGT-G-CGCTGC         TTTTTTTATACTTTA  89 61
HER31_RS13835 3021329 .. 3021346 + -14.1  -5.20216   GTGTCACAATATTGA             GGCGGCC AACC GGCCGCC              TTTTTTGCTACTGTA 100 45
        degS 3022499 .. 3022519 + -14.1  -5.45652   GCTGGGTATAAAAAA            GGAGAAGCA TCA TGCTTCTCC            TTTTTTATTGAAGGT 100 60
HER31_RS13880 NONE
HER31_RS13885 NONE
        kdsC 3029747 .. 3029776 +  -4.9  -3.23216   GGATGCTAAGGGCAT       GTCAGTATGAAGC GTGA GCTGCTTGCTGGC        TTGCTGCTACTCGCA  52 16
        lptC NONE
        lptA NONE
        lptB NONE
HER31_RS13910 NONE
         hpf NONE
        ptsN NONE
        rapZ NONE
HER31_RS13930 3035315 .. 3035329 +  -5.6  -2.53382   GCCATTGTTGCTGAC               GACGGC GCT GGCGTC               TCCGTTAACAGTGGT  47 379
HER31_RS13940 3036690 .. 3036718 + -11.8  -3.76224   TTGCTTCTAGGTAAA        GCAGTTCGCCGT CGCGC ATGGTGAACTGC        TTTGATAGGTAGAAC  93 66
HER31_RS13955 NONE
HER31_RS14070 3066217 .. 3066238 +  -8.1  -2.50935   TGCGGCCATCTCGTG           CT-GTTGCAG TTG CTGCAACAAG           GTTGCTCGCTGCGCT  59 141
HER31_RS14135 3083257 .. 3083279 + -13.5  -3.62616   GCTAAGCACCAAAAA           CAAAGGGCC TTATC GGCCCTTTG           TTGTGTCTGGTGCTG 100 52
HER31_RS14140 NONE
HER31_RS14145 3084142 .. 3084180 + -17.7  -3.17194   GCCGCAAGTAAATCT   CAGCAGCAACATCAACA GACAG TGTTGATGTTGCTGCTC   TTCACTTAGCGCCAT 100 30
HER31_RS14150 3085802 .. 3085815 +  -3.7   -3.7795   AGCGCAAATGAAGCT               GGCCG GTAG CGCCC                TTTAATCGAATTTAG  55 7
HER31_RS14155 3087001 .. 3087012 +  -4.4  -2.74144   CCTAAGCTACATCAT                CGAA TAAG TTCG                 CTTTAGCACTACCAC  47 19
HER31_RS14160 3088721 .. 3088748 +  -6.2  -2.61274   GCGATGCACTAAACA        TAGGGGCTGGCA GCAA TGTCAGCTCCAG         CTTACTTACGATACA  53 44
HER31_RS14165 3089097 .. 3089125 + -10.3  -5.08601   CCATTTTGTCAGCAG        TGCTGGTGCCG GGTCGAA CGGTACCGGCA        TTTTTATTCCAATGA  93 49
HER31_RS14170 3090315 .. 3090328 +  -3.8  -3.22448   CGATTAGGGATAGTT               GGTG TATTTC CACC                TTCGTACATCTTGGT  48 395
HER31_RS14180 3093490 .. 3093506 + -13.7  -3.16534   CACAGCCAAAGAAAA              GCCCAGC AAT GCTGGGC              TTCAATGTCATTAAT  93 372
        uvrA 3099515 .. 3099553 + -18.3  -2.68487   TGCAGGCTATCCAAT  GCGAACAACAACGGCGCC TTTA GGCGCCGTTGTTGTA-GC   TGCTGTAATAGTTAC 100 45
HER31_RS14210 NONE
HER31_RS14215 3102475 .. 3102492 + -12.7  -5.04597   GCATTGAAAATACAA             CGGCACC TTGA GGTGCCG              TTTTTGTCTCTGCAT 100 46
        metJ 3114506 .. 3114519 +  -8.1  -5.45802   ATATTAAGAAAAAAA               TCCGC TGCG GCGGA                TTTTTGTTTTGGGCA  95 45
HER31_RS14280 3117615 .. 3117635 + -13.9  -3.59979   TCTGGTATGCATTAG            GGGGGGGAG CTT CGCCCCCCC            TTTGGAATCCCCCCC 100 169
HER31_RS14290 3120425 .. 3120449 + -14.3  -5.08169   TGGTTAACAGCTTAA          GCCAGTTCCCC AAT GGGTAACTGGC          TTTTTTGGGATGTGT 100 66
        priA 3123488 .. 3123502 +  -4.2  -3.06492   AGGTTAAAATACAAG               GTTCGA TAA TCGACC               TGTTACGGTCAATAC  47 57
        argS NONE
HER31_RS14310 3125873 .. 3125894 + -15.9  -3.35465   ACTAAACCAATATAA           CAAGGCGCC TGAG GGCGCCTTG            TTACTCTGTATCACT 100 36
HER31_RS14315 3126565 .. 3126579 +  -5.8  -3.89215   AAACCCACGATAGAA               TGATAA CCA TTATCA               TTTGCATTTGTGGAG  63 69
HER31_RS14320 NONE
HER31_RS14325 3129069 .. 3129084 +  -6.8  -3.40597   TCTCAATGAGATAAA              GCG-CCC GTC GGGCCGC              TGTTTAGATGAAGGG  61 94
        hslV NONE
        hslU NONE
HER31_RS14340 3131428 .. 3131449 + -14.5    -5.252   TGTTGTTGCCAACCA           GCCACACTC AATC GAGTGTGGC            TTTTTTATGGCGGTG 100 49
        rraA 3137161 .. 3137180 + -13.6  -3.30243   TCATTTAGTGGCACC            GGCTTCGC TACG GCGAAGCC             TTGTACCCCGTCAAT 100 46
        ubiE NONE
HER31_RS14390 NONE
        ubiB NONE
        tatA NONE
        tatB NONE
        tatC NONE
HER31_RS14415 NONE
HER31_RS14420 3145788 .. 3145801 +  -3.1  -3.68351   AGATTGGTATTAGTT               TGTGA ACGA TCGCA                TTTCAATACTAAGCC  51 43
        hemB 3146909 .. 3146927 +  -8.1  -5.79526   CGAGTCTGATAACAA             CGGTAGG TTTAT CCTGCCG             TTTTTTTTGGGCTGT 100 44
HER31_RS14430 3147879 .. 3147898 + -10.7   -5.0916   TAATGGATATACCAA            CGACGGC CAAGGT GCCGTCG             TTTTTGTGTTGGAAA 100 48
        rarD 3149127 .. 3149144 +  -2.7  -3.69338   ACGGATAAACACGGT             CTTGGTGT GCA GC-CCAAG             TTGTTCCGCTTCCTT  52 347
HER31_RS14445 3150638 .. 3150654 +  -2.9   -3.6284   GGCGGCCCTCCAAAT              CTGATCG TCA CGATTCG              TTTAGGATACTGATT  50 89
        trxA 3155250 .. 3155270 +  -4.7  -3.27022   CGGCCACTTATAAGC            TGTTAAGGC TAG GCCTTAGGA            TTCCTATGGCCTAGC  50 28
         rho 3156762 .. 3156781 + -12.2   -5.4833   TGATAAAAACCGAAA            GGACCTGA ATAT TCAGGTCC             TTTTTTGTTGGCTAA 100 67
HER31_RS14475 3157319 .. 3157335 +  -7.9  -3.04188   GCCTCCCACAACATT              GAGGCAG CCC CAGCCTC              TGTCTGCTTGTGCTA  62 42
HER31_RS14480 3158049 .. 3158095 +  -9.7  -2.60002   CAATTGCCCAACCAC TTTGTCGTCA-TCTGGAGCG-AT TAA ATCCGCTCCAGATTGCCGGTAAA AATTTTGATTTCATC  68 155
        ubiD NONE
         fre 3160641 .. 3160667 + -15.2  -3.53031   ACTCGCTCGCGATCA         CAAAGCGGTGCA TCA TGCTCCGCTTTG         TTGGTTTAACGTCCA 100 44
HER31_RS14495 3161640 .. 3161654 +  -5.7  -2.85351   CGTCCTCACGATCGA               CCATG CCGTA CATGG               TGTCGTATGCCACAG  51 330
HER31_RS14545 NONE
HER31_RS14550 3172906 .. 3172918 +  -5.5  -2.53213   GTTGACTGGGGCGTC                GAGCT CCG GGCTC                TCCGTTGGCAGCTTC  47 101
HER31_RS14565 NONE
HER31_RS14570 NONE
HER31_RS14575 NONE
        mobA NONE
HER31_RS14585 NONE
        moaA 3182146 .. 3182166 + -12.6  -5.54338   CTGTACCATTAAAAA            GACCCAGC CAAGT GCTGGGTC            TTTTTATTTTGATTA 100 46
HER31_RS14595 NONE
HER31_RS14600 3197610 .. 3197630 +    -4  -2.91681   AACGCCAGCAAGAAA            CCTTAAAC CTACA GTTTGGGG            TATATCGACTTGAGG  46 347
HER31_RS14610 3200020 .. 3200040 +  -2.5   -3.5616   AATAAGAAGAACTGA            CCATGAATA AAT TACTCTTGG            TTGTCGCTTTTTCAC  48 36
HER31_RS14615 3200653 .. 3200670 +  -2.7   -2.6356   GCGTAGTATTACCAA             GCTTGCAA TCC TTGC-GGC             ATTGTCGCTGTCAGT  40 63
HER31_RS14620 NONE
HER31_RS14625 3203271 .. 3203298 + -18.6  -4.74801   CTACTGCAGATACAA        CAAAGCCGCTGA GATA TCAGCGGCTTTG         TTTTTCGTCAACTTC 100 56
HER31_RS14645 3206138 .. 3206157 + -16.4  -5.31456   AAGCAGTAACAAAAA            CGGCGCCC CAAG GGGCGCCG             TTTTTTATGGCTTAC 100 50
HER31_RS14655 3209992 .. 3210028 + -11.8  -5.37345   AGCGATTAATCGAAG   CCGAGTGATGC-ATATT ATTA AATATTGCAGCACTCGG    TTTTTTGTCGTTAAG 100 54
HER31_RS14715 3227079 .. 3227092 +  -2.3  -4.25104   TGTGCTAATCGTTAT               CTGAG TAAT CACAG                TTTTGCTGCAAGAAA  57 135
HER31_RS14740 3233274 .. 3233286 +  -9.1  -3.58343   GCAACTAGACCACCG                GTGGC ATT GCCAC                TTTGCACATACTGAA  70 288
HER31_RS14760 3237155 .. 3237181 +  -5.2  -3.87815   TAAAAGCAGGGAGTT         CGCTAACTCA ATCGATG TGAATTAGCG         TTTGTGCGCGTCAAA  61 126
HER31_RS14775 3241089 .. 3241103 +    -7  -3.60098   TTGTATGCATTAGCG               GGGAGC TTC GCCCCC               TTTGGAATCCCCCCT  64 387
HER31_RS14790 3247823 .. 3247855 +  -9.1  -2.83701   TCGATGTAGTCGCTA      GAGTGACAGCCTTTG TAA CTTACGCTGTCACTC      TATGCTCCCTCTTTC  66 32
HER31_RS14825 NONE
HER31_RS14830 3260015 .. 3260031 +  -2.9   -3.1789   AGAAAACCAAAATGT              TGCGTTG GGT CAAGGCG              TCTGTTATCGCAATT  45 300
HER31_RS14865 3266000 .. 3266019 + -12.2  -4.17355   TGGTTTAAACATAAA            GGGTAGGA TCGT TCCTACCC             TATTTTTTAGCCTTA  95 33
HER31_RS14905 3275827 .. 3275861 +  -8.6  -3.63655   TTGAGTTAACGCCTA     GGCTCGTTGATTGG GATACAA CCAGTCGATGGGCC     TTCATTTCCTTCTGA  72 32
HER31_RS14910 3277238 .. 3277259 + -10.9  -3.01712   CATAGCCATAAAATA           GCCACACTG GATT TAGTGTGGC            TATTCAGAGAAGCCA  76 263
HER31_RS14920 NONE
HER31_RS14925 3280833 .. 3280868 + -10.4  -3.11767   AGTTCAGTCAAATCT    CACGCTCGGCTCGGTGT TTC ACGCCT-GCTGGGCGTG    CTTGTTTTAGGCTGT  73 46
HER31_RS14930 NONE
        prpB NONE
        prpC NONE
        acnD 3286896 .. 3286906 +  -4.6  -3.05816   GTAAAAACAGCTATG                 GCCG TGT TGGC                 TTAGCTCCCAAATGC  49 37
        prpF NONE
HER31_RS14955 3289030 .. 3289051 +  -7.3  -3.74251   GTTTGGCCTGTTGCT           GAGCAGACT CAAC AATCTGCTC            TTTGGTCGGCATCTG  67 291
        zapB 3290691 .. 3290711 + -16.9  -5.14965   GATTACCAACAAAAA            GCGCCGCTA TGA TAGCGGCGC            TTTTTTGATGGCAAT 100 59
HER31_RS15000 3296599 .. 3296620 + -17.3  -4.36914   CCCAGCCAACCAAAA           CGGCCTCGC AATC GCGAGGCCG            TTTTATCAAACGAAC 100 41
HER31_RS15030 3305432 .. 3305454 +  -2.6  -3.68222   GCGGCACACCGGCTT           CATCCGCT AAGGTAC GGCGGAGG           TTCTTCAGCTTAGCA  50 183
HER31_RS15040 NONE
        rarD 3308786 .. 3308813 + -13.5   -2.6155   AGCATCTTGCGGTAA        TTGGTCAGCGC TCGATC GCGCTGGCCAA         GTTGCTCTTGCAGGG  78 56
HER31_RS15070 3315537 .. 3315555 +  -8.2  -3.72576   GCTCGCCATTAAATA             CAAAGTGG TGG CCATTTTG             TTTGGTCGCAACCCA  70 139
HER31_RS15080 NONE
        lysA 3317256 .. 3317266 +  -2.4  -3.33162   ACAACAACTGTGGCA                 AGGC GAA GCCC                 TTCTCCCGTAGACTA  45 4
        dapF NONE
HER31_RS15095 NONE
        xerC 3319695 .. 3319709 +  -3.4   -3.6682   CTGCACCAAATTCGG               TCGGAG TAA CACCGG               TTTGACTCAGTCAGC  51 49
HER31_RS15105 3320989 .. 3321000 +  -2.2  -3.32279   CTACCAATCACACCA                TCCT AGCA GGGA                 TATATTATTATGATG  45 48
HER31_RS15110 3322246 .. 3322264 + -13.1  -5.23316   ATTCACTGCATTAAA             CGGCGCC AATAC GGCGCCG             TTTTTTAATCTAATA 100 44
HER31_RS15115 3326500 .. 3326511 +  -5.8  -3.81146   AAACGTCGCCAAACG                CAGC CATT GCTG                 TTGTTAGTTAACGAA  61 3
HER31_RS15125 NONE
HER31_RS15130 NONE
        uvrD 3334148 .. 3334167 + -13.6   -4.9218   CACAGCCTACAAAAA            TCCCGAGC TTGT GCTCGGGA             TTTTTATGGTAACTA 100 273
HER31_RS15150 NONE
HER31_RS15155 3338209 .. 3338223 +  -2.7  -3.00766   AGCTTCGCCACCACA               CGCCC CATCA GGACG               TCTCTATGCGCTATT  43 381
HER31_RS15165 3339985 .. 3340015 +  -2.5    -4.614   AAGCAATGTTGGCTG       GCGTTATCGGC TTCATCTGT GCCAATACCGC       TTTTATCTGCTTCGC  65 471
HER31_RS15185 3343635 .. 3343650 +  -7.5  -5.45726   CCCCTAACTAAAAAA              CCGGC CGCCAA GCCGG               TTTTTTTAGGCTGTG  95 43
HER31_RS15195 3346743 .. 3346762 + -12.8  -3.31144   CATACCACAATAGAC            GCGGCGGC TTCG GTCGCCGC             TTGTGCCGCTGCAAC  90 45
HER31_RS15200 NONE
HER31_RS15205 3348595 .. 3348605 +  -5.4  -3.06796   GCTTATTCGCCATTT                 TCGA CAG TCGA                 TTGGGTGAACTGAGG  51 198
HER31_RS15220 3351620 .. 3351631 +  -5.8  -4.38313   GACCGAAGGAAACGG                CCTC TTCG GAGG                 TTTTGAATTTAATCT  71 260
HER31_RS15245 NONE
HER31_RS15250 3358104 .. 3358138 + -18.7  -3.16668   ACAACCACAACCTAA     CCCAGCAAGCCGGAC CTCGT GTCCGGTTTGTTGGG     TTAATGACGCTGTTA 100 57
HER31_RS15260 NONE
HER31_RS15265 3362031 .. 3362063 + -16.4  -3.40382   CAACCACAACCTAAC      CCAGCAAGCCGGAC CTCGT GTCCGGTTTGTTGG      TTATGGCGTTTGCTA 100 58
HER31_RS15270 3363538 .. 3363566 + -14.7  -3.87737   CATGTCTTAACGATC        AAAAAACGCAGCC ATT GGCTGCGTTTTTA        TTGTTGGTATTTATA 100 51
HER31_RS15295 3368860 .. 3368892 +  -5.6  -4.15044   GCAAAAAAGCAAAAA     CAGCGACTGATCACC CATA GGTAAT-AGCCGCTG      TTTGTTAGAACAACA  65 6
HER31_RS15320 3384524 .. 3384547 +   -14  -5.36314   TAAACACAGTAAAAG          CCGTCATTAC CTTG GTAATGACGG           TTTTTTGGTGTTTTA 100 90
HER31_RS15345 3390901 .. 3390926 + -13.4  -3.54489   ACAAACCAATAAAAA         CGGCCAATCA CCGCAA TGATTGGCCG          TTGATTTAGCGTTAG 100 380
HER31_RS15370 3397064 .. 3397087 +  -9.6  -4.11692   GGCGTTTATTCACAG          GTCGCATCAA TCGA TTGGTGCGGC           TTTTAAGGCTGAATA  81 48
        gorA 3406171 .. 3406189 +   -16  -4.35461   CAGTATGAATTGTAA             GGCCGAGC ACT GCTCGGCC             TTTTGCTGATCTTAA 100 56
HER31_RS15420 NONE
HER31_RS15425 3410503 .. 3410529 +  -6.6  -5.37171   GCAACGGTCAGATAA        GTCCGAGCTGC CTGCTA GC-GCTTGGAC         TTTTTATTTCGTGTT  91 94
HER31_RS15430 3411633 .. 3411645 +  -7.7  -2.58767   CCCAAAAGCGACCGT                CATGC AAA GCATG                TGAGTTAATCATTCG  59 275
HER31_RS15435 3412737 .. 3412754 +  -5.5  -3.59024   CCAAGCCCCGGCAGG             CACCGTC AACT GAGGGTG              TTGTGCTATTTGTGC  59 48
HER31_RS15450 NONE
HER31_RS15455 3416639 .. 3416659 + -10.4  -3.34267   ATGTAATGCTTAATA            GGAGGTCG CTAGC CGGCCTCC            TCTTACTTTCCCCTT  76 35
HER31_RS15460 3417516 .. 3417533 + -14.1  -4.27316   ACTTAAAATCATTAA             CGCCCGC CATT GCGGGCG              TTTTACGTTGCCACG 100 56
HER31_RS15465 3418209 .. 3418234 + -16.3  -4.14392   CAGCGCTGAATACAA         CAAAGGATGGC CGCA GCCATCCTTTG          TTTTCGCAGTTAACC 100 61
HER31_RS15475 3420119 .. 3420135 +    -5  -4.36914   CGCCAAATAATGTCA              CCGGGC TGCAT GCCCTG              TTTTATCGCCGCAGA  69 298
        glpK 3422312 .. 3422326 +  -4.2   -2.9186   TCACCGTTAACATGT               GCACAA AGA TTGAGC               TATCTCGCATTCCGT  46 31
HER31_RS15490 NONE
HER31_RS15495 NONE
        menH 3426326 .. 3426339 +  -3.8  -2.60244   TGAATTTATTGCTAC               GCTG CTCGGC CAGC                TCAGTTAGTTGCGAC  44 4
HER31_RS15505 NONE
        menC NONE
        menE 3429036 .. 3429056 + -16.9  -3.15861   CCAGAAACGAAAAAA            GCCCTGTCC AAA GGACAGGGC            TTAATCGAAATAATG 100 139
HER31_RS15550 3435647 .. 3435659 +  -7.7  -3.59087   GCATCAAACGCTTCA                TCCTC AAT GAGGA                TTTCAGCCTCCTCTT  64 74
         def NONE
         fmt NONE
        rsmB NONE
        trkA 3447003 .. 3447020 + -12.7  -5.28176   GCCAAGATCCCAAAA             GCCTCGC AGTC GCGAGGC              TTTTTTATGGCTGCG 100 45
HER31_RS15630 3449568 .. 3449601 + -11.8  -2.87405   AACTGCACCCAATGA     TCGAGCGCCTCAAG TCTGTC TTTGATGCGCTCGA      TGATCTTCTTGGTGT  76 443
        fadB NONE
        fadA 3456763 .. 3456792 + -11.6  -4.72272   TGATTTACACTTTAA       GGGCAGCTTCTAT GCATA ATAGA-GCTGCCC       TTTTTGATGACCGGA 100 67
        tusA 3457176 .. 3457196 + -16.9  -4.45399   GTAATACTTGCTAAC            CGCCGCTGA CTT TCAGCGGCG            TTTTGGTATTGGTAT 100 70
HER31_RS15670 3460484 .. 3460512 + -19.1  -3.21218   TAATTACTGAGTAAC        TAAAAAGGGAGCC ATT GGCTCCCTTTTTA        TTGCTGCTAAAAAAT 100 69
        glyQ NONE
        glyS 3464547 .. 3464564 + -12.7  -5.18726   ATCTTATAAAATCAA             GGCCACC GCAA GGTGGCC              TTTTTATTATCCCAA 100 45
HER31_RS15690 3465822 .. 3465847 + -16.3  -3.36289   AGTATCGCTCTGGCA         CAAGAGGTTCC ACGT GGAACCTCTTG          TTGATTACGCTGATC 100 53
HER31_RS15695 3467235 .. 3467250 + -10.4  -4.66938   TCAGTGACAAAAAAA              GCAGCC CGAA GGCTGC               TTTTCTATTAGAGCT  91 93
        rpmH NONE
        rnpA NONE
        yidD NONE
        yidC 3476104 .. 3476131 +   -17  -5.45726   TAATCGAGCTAACAA        TGGCCCCACCGC TTTG GCGTTGGGGCCA         TTTTTTTGGGCTGTG 100 46
        mnmE 3477977 .. 3477994 + -12.7  -5.03314   AATAGCACTGCCTGA             GCCCACC ATTC GGTGGGC              TTTTTTAGCGCTGAA 100 36
        mioC 3478874 .. 3478893 +  -4.9  -5.00616   TTGTAAAGCGGCTTA            GCAGTGC TAGAAT GCACCGC             TTTTTTGGCCCCAAG  77 402
        mnmG 3480845 .. 3480863 + -10.2  -3.37464   GTTAGAACCTAGTCA             CGGGGCTT TCC ATGCCCCG             TTGTCGCCTTCATAA  76 46
        rsmG NONE
HER31_RS15760 NONE
HER31_RS15765 3483488 .. 3483509 +  -8.7  -6.06723   TCGAACTGTTTTGAA           CCCACGAGC GAAA GTTTGTGGG            TTTTTTTTTGGCGCA 100 52
HER31_RS15770 NONE
        atpB NONE
        atpE 3485661 .. 3485688 +  -7.8  -2.83903   TTTAATCCAATAACT        TTTGTTGCTGCA AAAG TGCAGTAACTAA         TGGGTTTTTGAGGAG  61 36
        atpF NONE
        atpH NONE
        atpA NONE
        atpG 3489154 .. 3489168 +  -5.6  -3.53343   TGGGTGAGATTTGTG               CCGGTG CTG CAGCGG               TTTAACGCAACGGTT  57 6
        atpD NONE
        atpC 3491060 .. 3491100 + -16.4  -2.89742   AAGTAAACTTACAGA GCCACATAAAAAACGCCGC TTTT GCGGCGTTTTTT-TATGGC  TGTGTACCAATTAAG 100 35
        glmU 3493730 .. 3493748 + -14.6  -4.83615   CCGCATCGACAAAAA             GAGCAGCC CAA GGCTGCTC             TTTTTGTGACGACTG 100 48
HER31_RS15830 NONE
        glmS 3497401 .. 3497416 + -10.4  -5.19261   CAATATTCTAAAAGA              GCGACC ATTA GGTCGC               TTTTTTAATGGCTTT 100 60
        ccoG 3500028 .. 3500060 +  -9.1  -3.05816   CGCATCTGTCGACGG      GGCACAGCCACTTAC CAA GTAAGTCGCTGAGCA      TTAAATCGACACTCG  68 141
HER31_RS15850 3501923 .. 3501945 + -12.2  -4.25566   ACAGATTGTCTGAAA           TCATTAAGTC TTT GACTTAATGA           TTTTGGCTCGTTGTT  95 72
HER31_RS15855 3505089 .. 3505109 +  -6.1  -3.38291   TACAACACCCAAGTG            GTTTTGCGG ATA TCGCAGAGC            TTGTGAGATTGTAGA  59 28
         rrf NONE
         rrf 3505461 .. 3505482 + -15.9   -4.7871   TCGAATTTAGATTAA           GCCCGTTCC GAAA GGAACGGGC            TTTTTCGTGCTCGTT 100 41
HER31_RS15870 3508001 .. 3508023 + -12.2  -4.25566   ACAGATTGTCTGAAA           TCATTAAGTC TTT GACTTAATGA           TTTTGGCTCGTTGTT  95 72
HER31_RS15875 3511169 .. 3511189 +  -6.1  -3.38291   TACAACACCCAAGTG            GTTTTGCGG ATA TCGCAGAGC            TTGTGAGATTGTAGA  59 28
         rrf 3511359 .. 3511394 +   -17  -2.87211   GTCAGACACTTATTT    AGAGAAAGCCCGTTCC GAAA GGAACGGGCTTTTTCG     TATCTGCACCAAAAT 100 34
HER31_RS15885 3513684 .. 3513700 +  -9.4  -5.22312   CACATCTAACTAAAA              GGCTCC CAAGT GGAGCC              TTTTTTGATGTAGCT 100 45
HER31_RS15890 3514164 .. 3514184 + -11.1  -2.53747   ATCTGAAACAAATAA            GGGCGCC ACTAATG GGCGCCC            CTGTTGTAACGATTA  74 41
HER31_RS15900 3516471 .. 3516490 +   -10  -3.10464   TGCACTGATGGCTAG            TGCCCACT GATC AGTGGGCG             TGTTCGCCTTCGTGC  73 59
HER31_RS15915 3519445 .. 3519477 + -17.1  -3.06162   GAGCGTTAGCCTGTT      ACAACAAAGCCGTCC ATT GGGCGGCTTTGTTGA      TCTTAGCGTGGCATA 100 42
        ftsY NONE
        ftsE NONE
HER31_RS15940 3524105 .. 3524119 +  -2.1   -2.8007   CGCTCGTTAAGAGAG               TCAGA AGGGC TCTGG               TGGTTGGTGCATTAA  40 81
        rpoH NONE
HER31_RS15950 3525608 .. 3525624 +  -4.3  -4.65895   AAAATATTCGTCAAT              ACCTCCA AAG TGGGGGA              TTTTTCAATGGGAAA  71 330
HER31_RS15955 NONE
HER31_RS15960 NONE
HER31_RS15965 NONE
HER31_RS15970 3532084 .. 3532108 + -12.2   -4.4078   TACTGTAATTATTAA         GGCCGG-ATGC TAGC GCATACCGGCC          TTTTCGTTGACGAGG  95 61
HER31_RS15975 3532916 .. 3532953 +  -4.7   -3.6422   GCAAAAAAGCCATGG   TGTCCGGGTAGGGGTGA CCGA TCACCACCACCTTGCCA    TATTTTAGGGCGATG  55 192
HER31_RS16000 NONE
        secB 3538727 .. 3538738 +  -5.8  -3.05384   TGACGCTTAATCAAC                CGGA GTTT TCCG                 TTGACTGAAAAAACC  52 31
        gpsA 3539779 .. 3539796 +  -9.1  -4.63048   TTTGATGGAATATGA             GGAGTGC TTCG GCGCTCC              TTTGTTGTTTCTGAA  90 61
HER31_RS16015 3541029 .. 3541042 +  -2.3  -3.36492   TGTAGCAGGAAGCAA               CGCGT AAAT AAGCG                TTATCGGCTTAACCA  45 19
HER31_RS16020 3542562 .. 3542583 +  -6.6  -3.40522   GAGGTGGTCGTAGCA           CCAGATCT CTTGCT GGATCTGG            TTATCGTCGCAACGT  60 487
HER31_RS16030 3543840 .. 3543857 +  -9.1  -5.93252   GCTTGATAAAAAGAA             CGCTGGC CTAA GTCAGCG              TTTTTTGTTTTTAAC 100 57
        focA 3546407 .. 3546433 +  -7.4  -3.14146   TGCTTAACAGGACGC         TTAGATTGGTGA TAG TCACCGATGTAA         TTGGCTACTATTGTG  62 34
HER31_RS16045 NONE
HER31_RS16090 3558248 .. 3558264 + -10.9  -3.17219   TTTGGGTCGCAAAGT              GCTCACT GTT AGTGAGC              TTCGTCCCAGTTGTC  78 508
        elbB 3562328 .. 3562344 + -12.3  -2.97297   AACACAGCCTAAAAA              GCTAGCG TAA CGCTAGC              CTTTGGTTGGTCGAT  82 278
        moeA NONE
        moeB 3566353 .. 3566374 +  -9.4  -5.28942   ATCTAAGAAGAAAAA           CGCCCTGC ATTTAC GTAGGGCG            TTTTTGTTTGCGCTG 100 53
HER31_RS16130 3566716 .. 3566738 + -10.6  -5.33866   TCGGTGACAAGATGA           TGCCCTGC CAGTTGC GCAGGGCA           TTTTTTATGGCTTTG 100 63
HER31_RS16170 3573026 .. 3573041 + -10.4  -5.22006   CGGCCAACAATCAAA              GGACGC TGCG GCGTCC               TTTTTGTTGTCCTCG 100 41
        typA 3594344 .. 3594359 + -10.4   -5.4251   GCGAATATAAGAAAA              GGCACC TTCG GGTGCC               TTTTTTGTATCTAGC 100 50
HER31_RS16280 3598725 .. 3598738 +  -2.3  -3.20435   TGAAGATGAGGACGC               CCCCT CGAC AGCGG                TTCATCAATGATTGC  44 1
         dtd 3599558 .. 3599599 + -20.4   -4.3255   TTAATTGGTACACAG CCAAACAATGCCACTGGC GGTTGA GCGAGTGGCATTGTTTGG  TTTGTTGGTTAACAA 100 359
        rihA 3612356 .. 3612373 + -12.7  -4.06505   GATAACAAGCAAAAA             GCCGCTC GAGT GAGCGGC              TTTATAGTGTATTGC 100 50
HER31_RS16355 3617586 .. 3617611 + -16.9  -4.99638   TATTTCTTAATCTAA         GGCCTGCTGCG GCAA CGTAGCAGGCC          TTTTTGTGTCCGTAT 100 53
HER31_RS16365 3620261 .. 3620272 +  -2.2  -3.55801   CAGGGACGCCAGATT                GAGG GCGA CTTC                 TTTGCACAAATTGAT  47 76
HER31_RS16370 NONE
HER31_RS16375 3621141 .. 3621158 +  -9.9    -3.827   CTTACAAACAGAAAA             GCCATCA AAAT TGATGGC              TTTCAGTTACTTGTT  79 409
         rph 3622985 .. 3623006 + -15.9  -4.87291   ATTAATTTGAATTAT           GAAGCGGCC AATT GGCCGCTTC            TTTTTGATTACCATA 100 36
        pyrE 3623714 .. 3623731 + -12.7   -5.4251   AACTGATAAAACTAA             GGCGCTC AATT GAGCGCC              TTTTTTATCTCTACG 100 51
        radC NONE
        rpmB NONE
        rpmG 3627341 .. 3627376 + -13.4  -4.10552   TAATTGGTTTTGGAC    TCTTAAAAAACCGGCC TTTG GGCCGGTTTTTTTTGA     CTTTTTTTTAGTAAA 100 38
HER31_RS16425 NONE
HER31_RS16430 NONE
        mutM 3631058 .. 3631081 +  -3.8  -2.63596   TTGAGCTCTGAACAG          GCCTGTTCAA GCAA TTGAACCCGC           TCCTCTAGGGTGAAA  43 336
        rfaD NONE
        waaF 3633593 .. 3633613 +  -2.5  -4.50058   TGCAACGCTACGTTT            GGTGATTCA GTA TGAAGCAAC            TTTTCATTGTCGATG  62 239
HER31_RS16470 3637558 .. 3637613 +  -4.8  -3.76759   TATTGCCTATTAAAA GGCTGTGTCTTA-ATTAGCTGTTGCAT CCC ATCCAACAACTTCTTTAAGGCACTGCC TTTGGTCCAATTGGT  59 53
HER31_RS16485 3640951 .. 3640964 +  -2.3  -3.10344   AATAGATTGCGGCAA               TCCCG CACA CAGGA                TGTCTTAAATGAAAC  42 79
        lpcA 3641553 .. 3641588 + -12.2  -6.17033   TGATGTGAAAGTTAA    AAAATATTAAAGGTAG TTAA CTACCTTTAATATTTA     TTTTTTATTTTTTTT 100 33
HER31_RS16505 3644310 .. 3644331 +  -9.5  -2.94912   TAATGGGTTAGATAG           CGGCTTGAA TCAC TTCAAGCTG            TCTATCGGTTGCGCC  70 82
HER31_RS16520 3647652 .. 3647699 +  -5.1  -2.52676   GCTTTACCTCACAAA GTAAGCAAAGTGATA-CAGCC AAAGCCGC GGCAGCTATCACTTTGC-TGC TGCATTGGGGCAATG  48 48
HER31_RS16525 NONE
         tdh 3650018 .. 3650033 +  -7.5  -5.73339   AATCGTTATTCTAAA              GCGCC TTAATC GGCGC               TTTTTTTGTGCTTGT 100 46
        glpE NONE
        glpG 3651221 .. 3651241 + -11.9  -3.37344   ATGGTGGCTGCAAAC            TCGCCCTAA AGA TTAGGGCGG            TTACTTGGCTCAACC  85 10
HER31_RS16550 NONE
HER31_RS16555 NONE
HER31_RS16560 NONE
HER31_RS16565 NONE
HER31_RS16570 3658391 .. 3658407 +  -2.2  -3.05844   TGCCGACCTCAGTGC              GCTACA GTGAG TGAAGC              TATTGAAGTAAAACA  42 334
HER31_RS16575 3659154 .. 3659173 + -10.7  -4.87665   ATTAAGACGACAAAA            CGGCAGC GAAGGG GCTGCCG             TTTTTATAGCTGCAG  95 43
HER31_RS16585 NONE
HER31_RS16590 3661583 .. 3661611 +  -9.7  -3.50447   AACGGCTATTCAGAA        TATGCAAATAGGC ACT GCCTATTTGGGTA        TTGTATGGCGCTTGA  74 287
HER31_RS16605 NONE
HER31_RS16610 NONE
HER31_RS16615 NONE
HER31_RS16620 NONE
HER31_RS16625 3668431 .. 3668467 + -18.9  -4.60255   ACCTGTTGCAAAAAT    TGGAAAGGCTCGCTGTC ACT GACGGCGAGCTTTTTCA    TTTTTCCGGCATTGT 100 51
        lexA NONE
HER31_RS16645 3672930 .. 3672947 +  -5.6  -3.13772   GCTCAAACCCTTGAT             CAACCT AAAATG AGGTTG              TAGTTTTAATGGAGT  54 46
        coxB NONE
        ctaD 3675883 .. 3675902 +  -2.1  -2.83403   ACCGGTTGTGAAATA            GCTTATG GCTGAG CACAAGC             GTTTGCTCACGACCC  40 25
HER31_RS16660 NONE
HER31_RS16665 NONE
HER31_RS16675 3678270 .. 3678295 +  -2.5  -3.85817   TTGGGGAATAAGTCT         CAACTTGTTGT AGAA ACGACAAGACG          TTTATAACAACAAAT  52 30
HER31_RS16680 3678852 .. 3678884 +  -6.3  -4.24204   TGAAATTATCGAGAA      TAGGGTGAGACTTAT ATG AAAAAACTCACCCTA      TTTTCCATGTGCCTG  70 18
HER31_RS16685 NONE
HER31_RS16690 NONE
HER31_RS16695 3681366 .. 3681386 + -11.2  -3.83844   GGCGGTTGAAGCGAA            CAAGGAGG CGACA CCTCCTTG            TTGTTGATTACTCCG  91 32
        dinF NONE
HER31_RS16710 3685408 .. 3685431 + -15.4  -4.39166   CGGGCTCACAAAAAA          TGCCGGTAAG TAAA CTTACCGGCA           TTTTCGTATCTGAAG 100 345
        bioH 3687985 .. 3687996 +  -4.4  -3.57457   TCCGATTTTTGCGGG                GGTA GTTT TACC                 TTGGTTACTTTTTGA  55 21
HER31_RS16730 3688693 .. 3688711 +  -6.6  -3.85518   GTTTTAGCCATGCCT             GCGCGGTT ATT GGCTGCGC             TTGTTACTTCATCTT  67 143
        greB NONE
        ompR NONE
        envZ 3693649 .. 3693671 +  -8.5  -3.94634   TTGTACTTGGCAAAG           TTAGCGCGA AATTG TTGCGCTAA           TTGTTTGGCATACTG  72 77
        gspC NONE
        gspD NONE
        gspE NONE
        gspF NONE
        gspG NONE
        gspH NONE
        gspI NONE
        gspJ NONE
        gspK NONE
        gspL NONE
HER31_RS16820 3707493 .. 3707509 +  -7.2  -2.87983   ATCAGCAGTAAAATA              CGGCCT AGTTG GGGCCG              TGGTATTTGGCTTAT  59 58
HER31_RS16825 3708225 .. 3708238 +  -2.3  -3.14344   CAGTGGCCCAATTCC               GGGGT TATA ACCCA                TTAATGCAGGAAATG  44 16
        nudE NONE
        cysQ 3709768 .. 3709784 +  -9.3  -3.61371   TCTTGTATGCATTAG              GGGGGAG TTT CGCCCCC              TTTGGAATCCCCTTT  75 151
        fabR 3713025 .. 3713052 + -10.7  -4.80167   ATACCGTTAGTTGAA        TCCCCAAGTTG TTCACT CAATTTGGGGA         TTTTCGTTTTTGATA  95 48
HER31_RS16855 3714405 .. 3714435 + -12.7  -3.88946   GGCACAATACTAAAA      CGGCACCTAACTTG AAGC CAAGT-GGGTGCCG       TTGTTGTCTCGAGTG 100 48
HER31_RS16870 3718502 .. 3718524 +  -2.8  -3.46647   GGCACTCACGTAGAA           TTGAGAAA TCATCAT TTTCTCGA           TATTTACTGAGTGAC  48 440
HER31_RS16875 3720211 .. 3720233 +   -10  -4.25566   ACAGATTGTCTGAAA           TCATTAAGTC TTT GACTTGATGA           TTTTGGCTCGTTGTT  85 72
HER31_RS16880 3723482 .. 3723502 +  -6.1  -3.38291   TACAACACCCAAGTG            GTTTTGCGG ATA TCGCAGAGC            TTGTGAGATTGTAGA  59 28
         rrf NONE
HER31_RS16890 3723801 .. 3723821 + -16.9  -5.42514   CATTATTTCGAATAA            GCCCTGTCC TTT GGACAGGGC            TTTTTTCGTTTCTGG 100 39
        murB NONE
        birA 3726622 .. 3726633 +  -4.4  -3.22102   GGTTGGTGCCGTTAA                TCTG TTCC CAGA                 TCTTGTCGGCAGTCT  50 132
HER31_RS16910 3727734 .. 3727749 +  -7.6  -2.73159   TCCCGAGTTCGACTC              TTGGTG ACGG CACCAA               ATTTGGAGGGGTTCC  58 11
HER31_RS16915 3727839 .. 3727857 +  -3.2  -3.21218   CACCTCCCTCCACCA             TATTACTT CCT AGGTGATA             TTCATCATCAGGAAT  46 26
HER31_RS16920 3727958 .. 3727968 +  -3.2  -2.56596   GCTCCAAATTGATGT                 GCTG ATA TAGC                 TCAGTTGGTAGAGCG  42 35
HER31_RS16925 3728057 .. 3728088 +  -6.7  -4.53163   CAAAAAAATACGTTT      CCTCTTGATTTAGC TAAGT GCTAAC-CAAGAGG      TTTTGTCGTGTCTGC  77 49
         tuf 3729475 .. 3729492 + -14.1  -5.18726   GTAATTATCCCCCAA             GGGCGCC GAAA GGCGCCC              TTTTTGTTGTGGAAG 100 50
        secE NONE
        nusG 3730618 .. 3730650 + -11.3  -5.00616   AAAAACGATTGAGAT      GGTGCGGCGGATT TGTATAT AATTCGCCGCTCC      TTTTTTCACGGGGAG 100 54
        rplK NONE
        rplA 3732033 .. 3732046 +  -8.1  -3.93401   TCCCACCGTAAAGTC               CCCCA GTAA TGGGG                TTATTAGTTTCTAGG  72 208
        rplJ 3732589 .. 3732611 +  -2.6  -2.80411   CGACCAAAAAGAAGA           GCAAGCTG CCTAATT CGGCTAGC           TGCTTAAACTTTTTT  41 13
        rplL 3733059 .. 3733084 + -15.5  -4.65838   GTAAAAATCAGGTTG         GGCTGGTGGTT AAAT AACCACCGGCC          TTTTTGCGCTATATG 100 67
        rpoB 3737294 .. 3737340 +  -2.4  -2.71791   CACCAATAGGTGGCA T-GGCT-AAGG-GCGCAGTTCCG TTTG CGGAACTGCGCATCTAAAACCCA ATTTGGGAGACGAAT  40 51
        rpoC 3741594 .. 3741613 + -13.6  -5.48213   AGCGTTGATATAGAA            GGGCATCC GCAT GGATGCCC             TTTTTGTTTTGGGTC 100 52
        rpsL NONE
        rpsG 3742715 .. 3742742 + -15.6  -4.51174   CCGCTGGTAATGACT        TTGGCGTGGCAC GTAT GTGCCACGCCAC         TTTTCATTCTAGTCA 100 31
        fusA 3744978 .. 3744992 +  -7.8  -3.01712   ACAGATCCGGTCGCA               TGCGGC CGG GTCGCA               TATTGAAAGGAAAGA  62 59
         tuf 3746228 .. 3746245 + -10.5  -5.46276   CTACACTTTGAAAAA             GGCGTCC CTAG GGGCGCC              TTTTTTGTGTCTATT 100 57
HER31_RS17010 3756869 .. 3756892 +  -4.5  -3.56366   TGCGGCTAGGCAACA          CCATGCCAG CATAAT TTGGCAGGG           TTTGCAGCAGTTGTT  54 417
HER31_RS17040 NONE
HER31_RS17045 NONE
HER31_RS17050 NONE
HER31_RS17055 NONE
HER31_RS17060 NONE
HER31_RS17065 3771495 .. 3771537 + -18.1  -2.91582   CTGAATGTAAGTAAT GCTAGTAATGATGGCATCAT GAAA ATGGTGCCATCATTACT-GC TGTATAAATAACCTA 100 37
        rpsJ NONE
        rplC NONE
        rplD NONE
        rplW NONE
        rplB 3774541 .. 3774562 +  -8.7  -2.62933   GCGTACCGATAAATT           CATCGTACG TCGT CGTACGAAG            TAATATAGAGGATTC  63 1
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ 3776795 .. 3776827 + -12.8  -4.98522   TATTCTGTGACACGA     TGAAGCCGGCCCAGG TTCG CCTGGGCCGG-TTAA      TTTTTATCTACCCTT 100 53
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN 3778478 .. 3778492 +  -6.4  -3.14527   CGTGGTGAAGTTCCT               GGTCTT AAA AAGGCC               TCTTGGTAAGCATTC  57 2
        rpsH NONE
        rplF NONE
        rplR 3779805 .. 3779815 +  -6.8  -3.42056   ACGCTGCTCGTGAAG                 CTGG CCT CCAG                 TTCTAAGTTGGGAGT  61 9
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY NONE
        rpmJ 3782465 .. 3782495 + -16.3  -3.65224   AAACCGACAAAAGTG      CACA-GGGCTGACC AACA GGTCAGCCCCTGTG       TTGTTGCAATCGAGT 100 56
        rpsM NONE
        rpsK NONE
        rpsD NONE
        rpoA NONE
        rplQ 3785444 .. 3785459 + -10.4  -5.76633   TCGGATAAGAAAAAA              GCGAGC TTCG GCTCGC               TTTTTTTGTATCTGC 100 46
HER31_RS17210 3787703 .. 3787740 + -15.3  -3.73402   TTAAGGAAATGGCAG   TCATAAAAAAAGCTTCCA TAT TGGAAGCTTTTTTTA-GA   TTTGCTGAGACGTCT 100 442
HER31_RS17240 3791185 .. 3791204 + -12.2  -5.14563   CGAGCTAATAAAAAA            GCCTCTTC AATT GAAGAGGC             TTTTTTGATCCCGCA 100 49
HER31_RS17250 NONE
HER31_RS17255 NONE
HER31_RS17260 NONE
HER31_RS17265 3796450 .. 3796483 +  -9.7  -5.19879   TTTAAACAATATAAA     GCAGATTGGATGG ATTAATGA CCGTTCAATCTGC      TTTTTCTATTTAAGG 100 53
HER31_RS17270 3798548 .. 3798570 +   -10  -4.25566   ACAGATTGTCTGAAA           TCATTAAGTC TTT GACTTGATGA           TTTTGGCTCGTTGTT  85 72
HER31_RS17275 3801823 .. 3801843 +  -6.1  -3.38291   TACAACACCCAAGTG            GTTTTGCGG ATA TCGCAGAGC            TTGTGAGATTGTAGA  59 28
         rrf 3802013 .. 3802048 +   -17  -2.87211   GTCAGACACTTATTT    AGAGAAAGCCCGTTCC GAAA GGAACGGGCTTTTTCG     TATCTGCACCAAAAT 100 34
HER31_RS17285 3804715 .. 3804737 + -12.2  -4.25566   ACAGATTGTCTGAAA           TCATTAAGTC TTT GACTTAATGA           TTTTGGCTCGTTGTT  95 72
HER31_RS17290 3807883 .. 3807903 +  -6.1  -3.38291   TACAACACCCAAGTG            GTTTTGCGG ATA TCGCAGAGC            TTGTGAGATTGTAGA  59 28
         rrf 3808073 .. 3808108 +   -17  -2.87211   GTCAGACACTTATTT    AGAGAAAGCCCGTTCC GAAA GGAACGGGCTTTTTCG     TATCTGCGCCAAAAT 100 34
HER31_RS17300 3809664 .. 3809679 +  -3.2  -3.75517   GCCAATCGGTGTTAT              CCAAGC TGTA GATTGG               TTGGTTTTGTAAGAT  52 108
        argC NONE
        argB 3814877 .. 3814888 +  -2.2  -2.71731   TGGTTCGAGGTGAAC                CGGT CGGC ACTG                 TGGTTGAGGCATAAG  40 0
HER31_RS17325 NONE
HER31_RS17330 NONE
        argH 3819111 .. 3819128 + -12.7   -5.0916   CACAACCATAAAAAA             CACCGCC ATTT GGCGGTG              TTTTTGTATTGGCGC 100 218
HER31_RS17345 NONE
HER31_RS17350 NONE
HER31_RS17355 NONE
HER31_RS17360 NONE
HER31_RS17365 3826705 .. 3826733 + -15.4  -3.32514   CCAATTCTAATTACG        TAGAGGGCGGTA TCTTC TGCCGCCCTCTA        TTGCGTTGTTGTGTC 100 31
        aroK NONE
        aroB NONE
HER31_RS17380 NONE
HER31_RS17385 3831209 .. 3831235 +  -7.3  -3.34005   CTAGAATAGACAAAA        TCGCCTC-CTGC GTGA GCATAGAGGCGA         TTATAACAGTTCGTT  63 463
         rpe NONE
HER31_RS17405 NONE
        trpS 3834529 .. 3834542 +  -9.5  -5.64274   CAATACATAAAAAAA               CCGGC TTAA GCCGG                TTTTTTTATGGGTAA 100 60
        rsmI 3838844 .. 3838858 +  -3.5  -3.05816   CAAACAATCGCTATA               CTCCG CGCCT TGGAG               TTGGCTAGGCAATCG  45 47
        rnpB 3839255 .. 3839282 +   -20  -5.05113   AACCTATTTTAGGAA        GCCCGCAGTATC TGTT GATACTGCGGGC         TTTTCTTTGTCTAAG 100 37
HER31_RS17445 3840629 .. 3840669 + -12.7   -3.1634   TTCCTAAATTTATTA  TTTTAGCCAACGACAGCTG CAA TAGCTGTCGTTGGATCGAA  TTGGATCGTTTCGGC  86 72
        mraZ NONE
        rsmH 3842326 .. 3842342 +  -2.1  -2.63347   GCAGTTCAGTACTGC              GCGTGGC TGA GAAACGC              TAAGTTATGCTTGGC  39 6
        ftsL NONE
HER31_RS17465 3844372 .. 3844382 +  -2.4  -3.40371   AGGGCTTTTCGGGAG                 CGAC AAT GCCG                 TTAATTGATCAGGTG  45 7
        murE NONE
        murF NONE
        mraY 3848282 .. 3848307 +  -3.2  -3.14693   TTGCGACCTTGAAGG         TGCGCTAGCG TGAAGC CGTTGGCGGA          TATGTTAATCCTCGG  46 18
HER31_RS17485 3849579 .. 3849589 +  -2.4  -3.02144   TTATTGCTGCAGTTG                 AGGC GTT GCCA                 TGTTAACGGCCATCA  42 9
        ftsW NONE
        murG NONE
        murC NONE
HER31_RS17505 NONE
HER31_RS17510 NONE
        ftsA NONE
        ftsZ 3857476 .. 3857490 +  -7.2  -3.20723   CTTGCGTCGTCAAGC               CGATTA ACA TAATCG               TTACCTTGATCGGAG  62 19
        lpxC 3858536 .. 3858561 + -14.7  -4.66833   TGCAAAAATAACGTT         ATTGGCCGCCC CTAT GGGCGGCCAAC          TTTTTGAGCTTCGCG 100 55
HER31_RS17535 3859929 .. 3859950 +  -6.5  -3.10344   CTTAACGATTTATTT           TGGGAGCCA ATGA TGGCGCTCA            TGTGTTCAGTAGCGA  56 44
        secA 3862737 .. 3862754 + -12.7  -5.29782   GGCAGTGCATATAGA             GGCGACC TTAG GGTCGCC              TTTTTTATGGCTGTG 100 43
HER31_RS17545 3863612 .. 3863623 +  -5.8  -3.38339   AGCACCGACTGATGG                GCGA ACAG TCGC                 TTCCTCTTCCATCAT  57 141
        ampD NONE
        ampE 3874241 .. 3874253 +  -6.3  -3.59979   CTGCGGCAACGGATA                TTGGT AAT ACCAA                TTTACAATCCCGAAA  62 265
        pdhR NONE
        aceE NONE
        aceF 3879379 .. 3879399 +  -6.8  -3.71998   TAAAGGTCGCAGTAA            GCCAGAAC TTTGT GATCTGGC            TTCTGTTCCTGAGTG  66 38
        lpdA 3880921 .. 3880939 + -11.7  -5.28176   TAGTTAATTATAAAA             GGCAGCC TTTAT GGCTGCC             TTTTTTATGGATGAA 100 48
HER31_RS17630 3885388 .. 3885399 +  -4.4  -3.14132   GCAATGGCAAGGTGT                TCCT GCTG AGGA                 TTACTAACGCCACCG  50 7
        acnB 3888986 .. 3889008 + -19.2   -5.4505   CGCAGTAAACTAAAA           GGCCCTGCTC AAT GAGCAGGGCC           TTTTTTGTTGAGGAG 100 46
        hemE 3891150 .. 3891167 + -12.7  -5.98675   GCTACTTGTTGAAAA             GGCCACC TTCG GGTGGCC              TTTTTTGTTTTTATG 100 46
HER31_RS17655 3891864 .. 3891883 +   -10   -5.0925   ATAAACGCTGCTTAA            TGGCACCT TTGT GGGTGCCA             TTTTTCATTTTAACA  93 49
HER31_RS17660 NONE
HER31_RS17665 3894054 .. 3894064 +  -6.8  -3.62046   CGTTAGCCTAATGCC                 GCTG CAA CAGC                 TTGTTGCAGCGGTGG  64 42
HER31_RS17675 3897481 .. 3897495 +  -9.2  -2.79327   AAGGGGGATTCCAAA               GGGGGC GAA GCTCCC               CTTTGGGTGCCGTCG  66 198
HER31_RS17685 3901029 .. 3901054 + -14.7  -5.42862   CTACCCTACCCCTAG         GCGAGCCCGGT AGCC ACCGCGCTCGC          TTTTTTTGGGGCTGT 100 59
HER31_RS17690 3902699 .. 3902721 +  -4.8  -2.59323   CTTATCGGTTTCCCC           TACGTTTTGG TAA CCATGGCGTA           ATTCTACGGCGTTTT  48 142
        arsJ 3904103 .. 3904141 + -22.7  -4.24285   ACTGTAACGTTGAAA   TAAGCAGAGCCGCTGAT GATAG GTCAGCGGCTCTGCTTA   TTTGTTGGCTGTGTC 100 48
HER31_RS17705 3908495 .. 3908522 + -11.4  -3.45742   TTAAGTTGATTGAAG        TCGACATCGGTT TGAT AGTCGATGTCGA         TCTTATTGCTGCTGC  77 470
HER31_RS17715 NONE
HER31_RS17720 3910274 .. 3910285 +  -5.8  -5.86332   TTGGTTGCCAGCTAG                CAGC AATG GCTG                 TTTTTTTTCAATTGA 100 439
HER31_RS17730 3911138 .. 3911153 + -11.8  -4.84527   ACCGCTAAAGAAAAA              CGGGCC GATT GGCCCG               TTTTTGCTATCTGAG 100 55
        zntR NONE
HER31_RS17750 3916351 .. 3916367 + -11.5  -5.29782   AGATAGGAATAATAA              GGCGGCC GTG GGTCGCC              TTTTTTATGGCTGTG 100 44
HER31_RS17755 3917420 .. 3917447 +  -9.2  -3.65351   GGGTTAAGTAGGATT        TGC-CGCCAGC TCATGCC GCTGGCGCGCA        TTTGAATACCGATCA  73 474
HER31_RS17765 3918483 .. 3918498 +  -3.2  -4.51174   TTTCAGCAGCGCTTT              CTCCAT AACT AGGGAG               TTTTCGTTGTAATAC  64 186
HER31_RS17775 3920183 .. 3920200 + -12.7  -4.87665   CAGCGATAAAGACAA             CGCCACC GCGA GGTGGCG              TTTTTGTAGCTGCAA 100 103
HER31_RS17795 3923878 .. 3923901 +  -4.6  -2.89971   ATTAAAGGCAGCGAG          CAGCA-GCC AAAGTGA GGCTTGCTG          TAATTGGTTATTGGC  48 103
HER31_RS17820 3933066 .. 3933106 + -18.5  -4.15106   ACAAAGTGTTTAACT  GAAAACAGCGCAAGCAGGA TAC TCCTACTTGCGCTGTTTTG  TTTTGAGCCTTAGTA 100 28
HER31_RS17835 NONE
HER31_RS17840 3936486 .. 3936519 + -11.9  -4.57837   ACGTCAGGCCAGAGG     AATAAAAAGTCCGAG CATG CTCGGACTTTTTGTG      TTTTTAAACCGGTAT 100 40
HER31_RS17850 3938810 .. 3938828 +  -7.5  -4.45544   TAAGCCCTTTTTAAA             TCAAACC TTATT GGTTTGA             TTTTAGTTCATGCCG  80 87
HER31_RS17870 NONE
HER31_RS17875 NONE
HER31_RS17880 3944812 .. 3944829 + -12.7  -5.15167   GATGGGGTAAGTGAA             CGCCACC GCAA GGTGGCG              TTTTTGTTGCTGCTA 100 47
HER31_RS17915 3950739 .. 3950753 +  -5.8  -3.80841   GGGTTTACATGCAAA               TGATAA TTG TTATCA               TTTGCTCATAGTCAT  61 67
HER31_RS17920 3950977 .. 3950995 +  -2.5  -2.80398   AGTCATCGCTGCAAC            TTGC-CTA GCGT TAGTGCAA             TAGTTGACTTAATTA  41 18
HER31_RS17925 3951690 .. 3951701 +  -3.6  -3.10715   TTGTGGCGCCACCTA                GTGC CTCG GCGC                 TTGCCTACTCGTAAC  45 44
HER31_RS17955 3958018 .. 3958056 + -11.1  -4.25104   ATTGTTGTTAGCCTG  CGCCGTGTTGGTTTCG AGAGTGAG CGAAACC-GCGCGGCG   TTTTGCTAAAAACCA  88 40
HER31_RS17965 NONE
        groL 3961619 .. 3961644 + -17.7   -5.4833   GAGCTGCTAACAAAA         CGCCGATTGAG GAAA CTCAATCGGCG          TTTTTTGTTGGCTGC 100 70
HER31_RS18000 3969558 .. 3969577 +   -15  -4.93968   ACGTAGCTACAGATA            CGCCGCCT AATT AGGCGGCG             TTTTTGGTTCTCAAT 100 65
HER31_RS18010 3970814 .. 3970834 +    -4  -3.97368   TTGGCAACGCCAGTG           CCAGC-TGC GTCA GTAAGCTGG            TTTATCGATTGGGGG  57 10
         efp 3973120 .. 3973139 + -11.4  -5.40464   GTTGTACGATTTAGA            GAGTGGGC TTAG GCCCGCTC             TTTTTGTTTGTGCTA 100 57
        epmA 3974275 .. 3974303 +  -6.8  -3.49835   CATTGGCAATGGGTA       GGCTAAG-CCAAA ATTG TATGGTCTTAGCC        TCTTATGTTGTTGCA  62 101
HER31_RS18035 3974610 .. 3974632 +  -2.6  -4.42788   TCTCATAAGGACAGT           TTTATCGTCG TTA CGGCGAGATA           TTTTGTGGAATTAAG  60 46
HER31_RS18040 NONE
HER31_RS18045 NONE
HER31_RS18050 3977510 .. 3977543 +   -14  -4.03413   TGCTGCGGCAACGAG     TTAGCAACAGCGGC CATTGT GCCGCTGTTGTTGA      TTTATCTAACGGAAT 100 45
         orn 3986200 .. 3986213 +  -3.8  -2.80113   TTTGACGACAGCTGT               CGCT CAATTA AGCG                TGTGATGCAGTACTA  45 110
HER31_RS18095 NONE
HER31_RS18100 3986622 .. 3986635 +  -2.3  -2.60075   TTACCAAGCAAGGCA               TCGGC GCAA GCCAA                ATTGATTAAAGCGAC  39 59
HER31_RS18105 3987023 .. 3987035 +  -3.4  -2.75481   CACAGATTAAAGCGG                CACT AGCTC AGTG                TGGTTAGAATTAGCA  43 167
HER31_RS18110 3987316 .. 3987328 +  -3.4  -2.75481   CACAGATTAAAGCGG                CACT AGCTC AGTG                TGGTTAGAATTAGCA  43 167
HER31_RS18115 NONE
HER31_RS18120 3987686 .. 3987718 + -13.6   -3.7791   TGCCGCTCCAAATAA      AGAAAAAAGCCTCC CTAGT GGAGGCTTTTTTCG      TTTCATGCCTAATTA 100 31
HER31_RS18125 NONE
        tsaE NONE
HER31_RS18135 NONE
        mutL 3993221 .. 3993231 +  -8.2  -2.57501   TGAGTACTGATCCAC                 GGCC TTT GGCC                 ATCTGTTTAATGGGC  59 38
        miaA 3994159 .. 3994172 +  -5.2  -3.28924   GGCTATAAAAGACTA               GCGC TTTTAT GCGC                TTATCGCCGACAATA  54 50
         hfq NONE
        hflX NONE
        hflK NONE
        hflC 3997902 .. 3997919 +  -9.8   -5.5112   TAATTCCGCAGCAAA             GCCCGG CTTAGC CCGGGC              TTTTTTGTTGCTGAA 100 45
HER31_RS18170 3998162 .. 3998178 +  -9.5  -5.00616   GATTTGTTTTTGATC              GGATTCT GGT AGAATCC              TTTTTTAACCGGAAA  93 39
HER31_RS18175 3999528 .. 3999555 + -14.2  -3.49419   GTAAATCGCGACAAA        ATTAACGGGGCC TTAT GGCCCCGTTAAA         GTTTTTATAAAGGGG 100 51
HER31_RS18180 4000287 .. 4000307 +  -4.1  -3.65353   AACTAATTCAGCCTC            GTATAAC TAATTCC GTTATAC            TTTCCAGTGATTTCC  53 106
         rnr NONE
        rlmB 4003508 .. 4003529 + -14.5   -5.1963   TAGCTAAACGAAAAA           CGCCACCTA GCAA TAGGTGGCG            TTTTTGTTGGTTCAA 100 53
        rpsF 4004909 .. 4004920 +  -2.2  -2.84602   CAGCTGCACCTGCTG                CTGA GTAA TCGG                 ATTTCGTGAACTCCA  41 18
        priB 4005214 .. 4005226 +  -6.3  -3.72893   GTATTACACGCTGAC                TCGAT TGA ATCGA                TTTGCTAGGAGACTG  64 5
        rpsR 4005463 .. 4005483 +  -4.6  -3.01708   CTGCCTTACACCGAT            CTGCAAGG TTAAT CCCTGCGG            TCTGTATAAACTTTA  49 14
        rplI 4005989 .. 4006008 +   -15  -5.28176   TAGCTTCAAATAAAA            GCACCGCC CTAG GGCGGTGC             TTTTTTGTACCTAAA 100 48
HER31_RS18220 4007207 .. 4007221 +  -5.8  -3.66896   CCTATTACTGATTAT               GAAATT TCG AATTTC               TTATCTGTCTGTAAG  59 83
HER31_RS18225 4009358 .. 4009385 + -12.8  -4.65895   GTTAACTTAGGTAAA        GAAAAAGGCCCC ATTC GGGGCCTTTTTG         TTTTTAGCTCAAAGC 100 133
HER31_RS18235 4012347 .. 4012360 +  -8.1  -2.59881   CCCCCTTTGGGGGCC               GTCGC TATC GCGAC                ATTGTCCCCTAAATG  59 195
HER31_RS18315 NONE
HER31_RS18320 4030765 .. 4030789 +  -7.8   -5.2696   TTAGCTGATTAATTG          AGTCCCCTGA CTGAT TCAGGGGGCA          TTTTTTGCGTTTTGA  91 57
HER31_RS18325 4031674 .. 4031704 +  -4.1   -3.4759   CACGGCTAATTGAAT      CAACGG-TAACT-CC TAT GGTAGTGAACCGTTG      TTGGTTCTAGTGGAT  52 28
HER31_RS18360 4046037 .. 4046057 +  -8.3   -4.2109   ATCAGAAACGAAAAA            GGCCGTA CTTTCGT TACGGCC            TTTATCTATATGTTG  80 358
HER31_RS18375 4048927 .. 4048948 + -14.5  -4.11295   CGCAGACACAAAAAA           GCCCGTAAC TTTC GTTACGGGC            TTTCTCTAAATTTGG 100 380
HER31_RS18385 4050072 .. 4050090 +    -4  -4.46155   TTCAGTGCTGGTATA             TATTTTTT CAA AAAAAGTA             TTTTCTCAGTATATA  66 393
HER31_RS18400 4052245 .. 4052264 + -12.2   -4.1021   CGCTTTAAACAAAAA            TGGCTTCC CTAG GGAAGCCA             TTTCTCGTTATAGAG  93 47
HER31_RS18410 4054722 .. 4054737 +  -4.6  -2.57013   AAAACACCGGTAATC              GCAGCG ATAG CTCTGC               TGACTTAAGTTGGGC  46 28
HER31_RS18415 4056748 .. 4056766 + -11.7  -5.45726   AACAACAAACACAAA             CGGCACC AGTAA GGTGCCG             TTTTTTTAGGCTGTG 100 39
        pepA 4061053 .. 4061071 + -13.2  -5.37345   TATTCATTAAACAAA             GGAGCTCA TAA TGAGCTCC             TTTTTTGTGGTTGGC 100 54
HER31_RS18435 NONE
HER31_RS18440 4064568 .. 4064589 + -17.3  -5.78622   TCTCTTGTTGAAAAG           CGCCACCGC AATT GCGGTGGCG            TTTTTTTTGGGCTGA 100 50
HER31_RS18445 NONE
HER31_RS18450 NONE
HER31_RS18455 4066322 .. 4066340 +   -16  -4.72986   AATGAGATACAAAAA             CGGCGCTC AAT GAGCGCCG             TTTTTAATGCCAGTG 100 46
HER31_RS18470 NONE
        erpA 4070831 .. 4070844 +  -9.5  -5.71712   AAAGCTCACTAAAAG               CCGCC TTAC GGCGG                TTTTTTTGTGTCCAC 100 63
HER31_RS18480 4071277 .. 4071297 + -16.9  -4.84363   ACCCAAAGAGATTAA            CGCCGCTGA GTT TCAGCGGCG            TTTTTGGTGGTTTCG 100 63
HER31_RS18485 4072531 .. 4072548 +  -2.7  -3.62224   CAGGTGTCGCTGGAG             TCGCA ACCATGAG TGCGA              TTATTCAAGCGCTGT  50 14
HER31_RS18490 4075659 .. 4075702 +  -6.7  -3.10522   ATTATTTACAGCAGT GGCAACAGCCTAAAACTGT CATCGA ACCTTGATAGGCTGTTGCC TCTATTGCATGGGGT  58 41
        chrA 4076941 .. 4076966 +  -4.5  -5.21709   ACACAGCCAAAAAAA         ACGCCACCAGC ATGA GCCGATGGCGG          TTTTTTAGTGTGCGG  80 86
HER31_RS18550 4087079 .. 4087098 + -12.2  -5.66229   TTCCGCCATGCTAAA            GCCAACAC CTAG GTGTTGGC             TTTTTTGTTGTTACT 100 160
HER31_RS18560 4089438 .. 4089467 +  -3.7  -2.80479   TGAAAATTTTCAAGT       AATTGCCTATT GAGTGAAA AATAGGCAATG        TGGATTTTAGTTAAA  45 89
HER31_RS18565 NONE
HER31_RS18570 NONE
HER31_RS18575 NONE
HER31_RS18580 4092862 .. 4092876 +  -8.5  -5.39755   GATTTAGACACTGAA               GGCGC GTTAA GCGCC               TTTTTTGTGGTTGTG 100 61
HER31_RS18585 NONE
HER31_RS18590 NONE
HER31_RS18595 4096976 .. 4096991 +  -3.3  -2.94126   CGCCAGTTGCGTTAG              GGTTA TTGGCT TAACC               TCTATCAATCTGGTT  44 26
HER31_RS18600 4098198 .. 4098217 + -13.6   -4.8269   CACAGCCATAAAAAA            CGGGACTC AATT GAGTCCCG             TTTTTGCTGCTTATC 100 325
HER31_RS18620 NONE
        cysI NONE
HER31_RS18630 4105728 .. 4105752 + -17.3  -5.45726   TAACTAGTTTATTGA          TCCCCTAACGA GTG TCGTTAGGGGA          TTTTTTTGGGCTGTG 100 72
        gltS 4110596 .. 4110619 + -15.4  -5.24531   GAATGTTGGTGCAAA          TGCCAGTCAG TTAT CTGACTGGCA           TTTTTTGTGCCCAAT 100 54
HER31_RS18660 4111728 .. 4111738 +    -4   -4.6526   AAGAGAATAAATAGT                 GTTA GAG TAAC                 TTTTTGAAAATTTAT  69 205
HER31_RS18665 4114105 .. 4114115 +  -6.8  -3.29043   AAAAACAGTTGGCCA                 TCGC TTC GCGA                 TTATAGCCAACCATT  61 69
HER31_RS18670 4114624 .. 4114640 +  -5.8  -3.71686   TAACCAACTATTATT              TGCCTC TTAGT GAGGCG              TTATGTTGCATTCCA  61 97
HER31_RS18675 4115431 .. 4115489 +  -6.7  -3.13899   AAAGCACTAAAGTAG GACGCAAAAAGCATGGCTTGCGTTCGT ACCTC ACTAATTATAGCCATGCATTTTGCGCC TCTTAGTGGAGCGTT  59 42
HER31_RS18680 NONE
HER31_RS18685 4117107 .. 4117123 +    -5  -3.05816   TAGCCAACTTTTACT              CACCGC TTATT GCGGCG              TTAGGTGCCCAGTCA  51 97
HER31_RS18690 NONE
HER31_RS18695 4119043 .. 4119060 + -14.1   -5.1356   CTAAATACAAAAAAA             CGCCCGC ATTT GCGGGCG              TTTTTGTTGCTAGCC 100 346
HER31_RS18710 4126750 .. 4126764 +    -7  -3.60475   TTGTATGCCTTAGGC               GGGAGC TTC GCCCCC               TTTGGAATCCCCCTT  64 460
        cobA 4129446 .. 4129463 +  -8.4  -3.57462   GAATGCGCATTGGGG             CCGGTC TCAGTC GACCGG              TTTCAAGCTCGACTG  67 162
HER31_RS18740 4129130 .. 4129150 -  -4.7   -3.3344   AGCCAAGTTGGACAA            CAACGTC TTACTGC GACGCTG            GCGGAATTAAGCGAA  52 133
HER31_RS18730 NONE
HER31_RS18725 NONE
HER31_RS18720 4127891 .. 4127908 -  -9.1  -5.28176   TTTAGGTACAAAAAA             GCCCGCA TAAA TGCAGGC              TTATTGTAAAAGTGG 100 38
HER31_RS18715 4126275 .. 4126293 -  -4.5  -2.52543   ACGGTGGCCAAGCTA             CGGCGTT AACTG AACGTCG             AATCGCTGTCGCTCA  46 38
        gltB NONE
HER31_RS18700 4119035 .. 4119069 - -16.7  -3.46872   AGTAATACCTAAATA    CAA-AAAAACGCCCGC ATTT GCGGGCGTTTTTGTTG     CTAGCCGATGTGCTT 100 39
        mtnN NONE
HER31_RS18645 NONE
HER31_RS18640 NONE
HER31_RS18635 4105690 .. 4105705 -  -2.6  -3.55761   GATTTAGCCGTTAAA              GCAATCA CAC TGA-TGC              CGCTGGTTAACTAGT  48 486
HER31_RS18615 NONE
HER31_RS18610 NONE
HER31_RS18605 4098198 .. 4098217 - -13.6  -5.29782   CACAGCCATAAAAAA            CGGGACTC AATT GAGTCCCG             TTTTTGCTGCTTATC 100 50
HER31_RS18555 4087079 .. 4087098 - -12.2  -3.59979   TTCCGCCATGCTAAA            GCCAACAC CTAG GTGTTGGC             TTTTTTGTTGTTACT  89 57
HER31_RS18545 NONE
        hypD NONE
        hypE NONE
HER31_RS18530 NONE
HER31_RS18525 NONE
HER31_RS18520 NONE
HER31_RS18515 NONE
HER31_RS18510 4078427 .. 4078438 -  -5.8  -2.79912   GTTAAAAAGAACCGA                GTGC ATTG GCAC                 TATCAGTCCTTGTGG  50 28
HER31_RS18505 NONE
        selD 4076942 .. 4076965 - -12.4  -5.83822   CACAGCCAAAAAAAA          CGCCACCAGC ATGA GCCGATGGCG           GTTTTTTAGTGTGCG 100 46
HER31_RS18465 4067716 .. 4067731 - -10.4  -3.29471   GGCTGATGAGATTAA              GCCGCT GTTA AGCGGC               GTTAATAAGTATACG  76 188
        hemL 4066322 .. 4066340 -   -16  -5.06505   AATGAGATACAAAAA             CGGCGCTC AAT GAGCGCCG             TTTTTAATGCCAGTG 100 47
        lptF NONE
        lptG 4056748 .. 4056766 - -11.7  -4.49838   AACAACAAACACAAA             CGGCACC AGTAA GGTGCCG             TTTTTTTAGGCTGTG 100 343
HER31_RS18405 4052245 .. 4052264 - -12.2  -5.27335   CGCTTTAAACAAAAA            TGGCTTCC CTAG GGAAGCCA             TTTCTCGTTATAGAG 100 56
HER31_RS18395 4051465 .. 4051486 - -14.5   -5.4251   CGCAGACACAAAAAA           GCCCGTAAC TTTC GTTACGGGC            TTTCTCTAAATTTGG 100 38
HER31_RS18380 4048927 .. 4048948 - -14.5   -5.4251   CGCAGACACAAAAAA           GCCCGTAAC TTTC GTTACGGGC            TTTCTCTAAATTTGG 100 38
HER31_RS18370 NONE
HER31_RS18365 4046037 .. 4046057 -  -8.3  -5.05505   ATCAGAAACGAAAAA            GGCCGTA CTTTCGT TACGGCC            TTTATCTATATGTTG  91 122
HER31_RS18355 4044813 .. 4044826 -  -5.3  -4.37658   AACTTTTCGATAAAA               CAGTA ACTT TACTG                GTTTAGCTCGCTAAG  68 206
HER31_RS18350 4042331 .. 4042350 - -13.6  -5.06505   AATGAGATACAAAAA            CGGCTTCC CAAG GGAAGCCG             TTTATTTGAATCTGG 100 49
HER31_RS18345 4040049 .. 4040071 - -14.2  -5.42862   ACACCGCCAAAAAAA           CGGGGACTCA TAG TAAGTCCCCG           TTTCGGTTAAAGCAT 100 48
HER31_RS18340 4039675 .. 4039696 - -14.5   -5.4251   CGCAGACACAAAAAA           GCCCGTAAC TTTC GTTACGGGC            TTTTTCTAAATTTGG 100 38
HER31_RS18335 NONE
HER31_RS18330 4032011 .. 4032040 -  -3.5  -4.05788   CGCGTCCAAACCAAA       CTAGCCAGCTTTC CGGT GATAACTGGTCAG        TTATTAACAAATCTA  57 294
HER31_RS18310 NONE
HER31_RS18305 NONE
HER31_RS18300 NONE
HER31_RS18295 NONE
HER31_RS18290 NONE
HER31_RS18285 NONE
HER31_RS18280 NONE
HER31_RS18275 4018701 .. 4018721 -  -2.5  -2.89039   AAGCAGGCGGACAGA            TCGAACATC ACT GCTGTTCCA            CGCGTTGAGCCATCA  42 12
HER31_RS18270 4018235 .. 4018247 -  -3.3  -2.80816   CGGTTACTGAGCATA                GTGTG CCC CACTC                GCAATACGTTGTTGT  43 1
HER31_RS18265 NONE
HER31_RS18260 NONE
HER31_RS18255 4016021 .. 4016036 -  -3.2  -3.09492   TGGTTAACCGCAATA              CCGG TTTAGTTG CCGG               TGTAGTAGTTCAGGT  45 15
HER31_RS18250 NONE
HER31_RS18245 4013417 .. 4013428 -  -5.8  -3.10409   CATTAACTGAGTGAA                GGTG GTTA CACC                 TGCGCACTGCTTTTA  52 19
HER31_RS18240 4012384 .. 4012396 -  -4.8  -3.70076   CTAAATGCACCGAAA                TCGG TGAAG CCGA                AGGCTTAAGATAAAC  57 190
HER31_RS18230 4009364 .. 4009379 - -11.8  -5.30616   TTAGGTAAAGAAAAA              GGCCCC ATTC GGGGCC               TTTTTGTTTTTAGCT 100 62
HER31_RS18195 4003508 .. 4003529 - -14.5  -5.00138   TAGCTAAACGAAAAA           CGCCACCTA GCAA TAGGTGGCG            TTTTTGTTGGTTCAA 100 49
        rsgA NONE
         psd 3983460 .. 3983475 - -10.4  -5.43414   AGCAGAGACAAAAAA              GGAGGC GTCA GCCTCC               TTAGTGAAATTATCT 100 57
HER31_RS18075 NONE
HER31_RS18070 NONE
HER31_RS18065 3978474 .. 3978509 -  -3.2  -5.00851   ACTAAGGAAATAAAA    TTTTCGCCATTGTGAG GTTA CGCACAATGGCTCGAA     GAAGCGGGAGCTAAA  72 51
HER31_RS18060 3978102 .. 3978125 -    -8  -2.52933   TTGGAATGTAGCAAG          CCGCGCACGG TAAA CCGCGCGTGA           TAGGGGGTAGGACTC  59 64
         bfr 3977517 .. 3977536 - -10.7  -3.20435   GCAACGAGTTAGCAA            CAGCGGC CATTGT GCCGCTG             TTGTTGATTTATCTA  78 47
        epmB NONE
HER31_RS18015 3970779 .. 3970809 -  -3.4  -3.25823   TTGTTGCGACAGCAA      GGCGTTACCGTAAC CAACT GTT--GGCAACGCC      AGTGCCAGCTGCGTC  46 75
HER31_RS18005 3969558 .. 3969577 -   -15  -3.01119   ACGTAGCTACAGATA            CGCCGCCT AATT AGGCGGCG             TTTTTGGTTCTCAAT  89 50
HER31_RS17995 3966880 .. 3966905 - -14.8  -4.61633   ACACAGCCCCAAAAA         TGCCAGCGAG TGTTGG CTCGCTGGCA          TTTTAGTTGGTGCAG 100 74
HER31_RS17985 3964143 .. 3964161 - -17.4  -5.06414   CTGGGGTAACAAAAA             CGGCGGCC GAT GGCCGCCG             TTGGTTGATTCCTTA 100 55
HER31_RS17980 3963171 .. 3963187 -    -3  -3.59979   TGTTGGTACTGCAAA             GCGTATG CATT CA-ACGC              TGCTGAAACCTTTCT  50 159
HER31_RS17975 3961619 .. 3961644 - -17.7  -4.63932   GAGCTGCTAACAAAA         CGCCGATTGAG GAAA CTCAATCGGCG          TTTTTTGTTGGCTGC 100 335
HER31_RS17960 3957625 .. 3957642 -  -4.8  -3.56594   GCAAAGTCGCTTAAA             CCAAGG TGAGAT CCCTGG              ACTGCAGATCATGGA  54 383
HER31_RS17950 NONE
HER31_RS17945 3955135 .. 3955153 -  -8.8   -4.8048   TCGTGAGACTAAAAA             GCCCGC GAATCAT GCGGGC             TTTTAATGTTATCGA  89 62
HER31_RS17940 NONE
HER31_RS17935 NONE
HER31_RS17930 3951485 .. 3951519 - -11.5  -3.44284   TCTCTATCAACAAGA    GCCCTCGCTC-GGGCA AATG TACCCAGAGCGAGAAC     TTAGCGATGCCTGTT  77 212
HER31_RS17910 3948718 .. 3948735 - -11.3  -5.12971   AACAGGCAATAAAAA             GCGATGC CGAG GCATCGC              TTTTTGGGTACAGGC 100 49
        arfB 3948230 .. 3948249 -  -3.6  -2.82742   ATCCCCGCAGAATTA            GGAAATTC AGTC GAATTTCT             TGGTTCGCAGTGCTT  43 12
        aroQ NONE
HER31_RS17895 NONE
        accC 3945740 .. 3945769 - -10.1  -5.69473   CAGAGCATAAAAAAA       CCGCAAACCCT TGTTTATT AAGGTTTGCGG        TTTAGGTATCAGAAT 100 53
HER31_RS17885 3944812 .. 3944829 - -12.7  -3.17392   GATGGGGTAAGTGAA             CGCCACC GCAA GGTGGCG              TTTTTGTTGCTGCTA  86 93
        prmA 3940263 .. 3940274 -  -3.6  -4.07687   ATTGGCTCTGCAAAA                CCAC GTTA GCGG                 TTACTCACTTCCGTG  57 84
        dusB NONE
         fis 3938778 .. 3938801 -  -8.9  -5.62045   ACAGACAATAAAAAA          GGGCCTACA AATTAA TGTAAGCCC           TTTTTAAATCAAACC 100 55
HER31_RS17845 3936494 .. 3936511 - -11.3  -5.16841   CCAGAGGAATAAAAA             GTCCGAG CATG CTCGGAC              TTTTTGTGTTTTTAA 100 53
HER31_RS17830 NONE
HER31_RS17825 3933071 .. 3933101 - -20.6  -4.27316   GTGTTTAACTGAAAA       CAGCGCAAGCAGGA TAC TCCTACTTGCGCTG       TTTTGTTTTGAGCCT 100 365
        pepF 3927421 .. 3927446 - -16.3  -4.17316   ATTGTGCCAAAACAA         CAAAGCCCTTC AGTT GAAGGGCTTTG          ATTGGCTGTGTCGAC 100 255
HER31_RS17810 3925236 .. 3925282 -  -6.4  -4.23007   CAGAGAAGGGCAAAA TTCGACAGCTGAAAACGCCG TATTGAC CGGCGCTAACGGCTGCCGCA GTGACCGTTGAGTCA  70 340
HER31_RS17805 3924386 .. 3924404 - -14.6   -4.7497   CTTAGGTATCAAAAA             GGGAGAGC TAA GCTCTCCC             TCTAACAATCAACCT 100 67
HER31_RS17800 3923812 .. 3923851 -  -9.2  -2.64454   GTAATAAACCAATAT  GCAGTGGTGCCGGCG-GCA AAG TGTTCGCCAGCACCACAGG  CCAAGCTAGAGATTA  66 83
HER31_RS17790 NONE
HER31_RS17785 3921232 .. 3921266 - -11.5  -2.58272   CACAGGAGCAAGCGA     GCAACTCTGTCCTGC AGATA GCAGTAAAGAGTTGC     CCAGACGACGGTTAG  77 37
HER31_RS17780 3920240 .. 3920257 - -12.7  -3.92869   AACAGAGACAGCAAA             GGCGAGC CTTA GCTCGCC              TTTTGGGTTTCGCTA 100 48
HER31_RS17770 3917938 .. 3917955 -  -6.3  -3.07962   TTGGACAGGCTAACA             GTCGCTA TAGC TAGCAAC              AAGTAGGAGTTAATA  56 412
HER31_RS17760 3916584 .. 3916596 -  -4.8  -3.74224   CCTAAAGCACCGAAA                TCGG TTAAG CCGA                AGGCTTGATATAAAC  59 425
        purH 3912480 .. 3912498 -  -8.8  -3.56643   TCGATATCCTTTAAA             TCGCGGCA TCA TGCCGTGA             AGTTTTCTGTTTGTA  71 256
        purD 3911138 .. 3911153 - -11.8  -5.27938   ACCGCTAAAGAAAAA              CGGGCC GATT GGCCCG               TTTTTGCTATCTGAG 100 54
HER31_RS17725 3909849 .. 3909862 -  -2.3  -5.25803   AAGCGCCACAAAAAA               GCACA CCAC TGAGC                CGCGCCATAGCGGTT  74 39
HER31_RS17710 3907644 .. 3907660 -    -3  -3.91506   TGACCGGTAAAAAGA             TGACTCC GGTT GGAG-CA              CGACTACAGGCCGAT  54 412
HER31_RS17700 3904103 .. 3904141 -   -22  -3.60971   ACTGTAACGTTGAAA   TAAGCAGAGCCGCTGA TGATAGG TCAGCGGCTCTGCTTA   TTTGTTGGCTGTGTC 100 347
HER31_RS17680 3897481 .. 3897515 -  -9.9  -3.60475   AAGGGGGATTCCAAA    GGGGGCGA-AGCTCCC CTTT GGGTGCCGTCGCCACC     GCGACATCCTCCCCC  77 121
HER31_RS17670 3893995 .. 3894008 -  -5.9  -3.67775   ACTGGTACTGAATAA               CGCCC GTTT AGGCG                CTCAGATCGCTAAGG  62 58
         rsd 3888981 .. 3889013 - -19.3  -2.83403   GTTGGCGCAGTAAAC      TAAAAGGCCCTGCTC AAT GAGCAGGGCCTTTTT      TGTTGAGGAGTAGAG 100 165
        hxpB 3885299 .. 3885314 -    -9   -2.5294   CAGTTTTTACAAGAG              CAAGGC TGCA GCCTTG               TACAGGGTTTTCGTT  61 127
HER31_RS17595 NONE
        nadC 3870936 .. 3870965 -  -6.3   -2.7497   ATATCAGCCCGAAAG       CGGCAGGCCGGGTG GCC CTCCTGG-CTACCG       ACAGCTACTCCGTAG  53 235
HER31_RS17585 3870442 .. 3870468 -   -16  -3.26649   ACATCGTGAGATGAA         GTACAGCTCCTC TTC AAGGAGCTGTAC         TTTCTACTATCAACT 100 35
        pilB NONE
HER31_RS17575 NONE
HER31_RS17570 NONE
        coaE NONE
        zapD NONE
        yacG NONE
HER31_RS17550 3863400 .. 3863425 -  -7.6  -3.56844   TGCAGTAAGCAAAGA         GGGCAACC AGACCCAATG GGTTGCCC          TTGACCAACTTATGG  65 35
HER31_RS17530 3858462 .. 3858480 -  -3.1  -3.86897   GTCAGCTTTGACAAA            CCA-CAGC AAGT GCCGATGG             ATTACTTGGCACCCA  54 79
HER31_RS17430 NONE
HER31_RS17425 NONE
HER31_RS17420 NONE
        yraP 3834519 .. 3834552 - -19.9  -3.19602   TTGGGCATACCAATA     CATAAAAAAACCGGC TTAA GCCGGTTTTTTTATG      GGTAAAATATGCAGG 100 41
HER31_RS17395 3831209 .. 3831235 -  -9.5  -4.71223   CTAGAATAGACAAAA        TCGCCTCC-TGC GTGA GCATAGAGGCGA         TTATAACAGTTCGTT  91 76
HER31_RS17390 3830321 .. 3830332 -  -7.2  -3.29511   CCGATTTGGTTATAA                CGGC CTAT GCCG                 TTACAACAAGAAGGG  61 495
HER31_RS17340 3819111 .. 3819128 - -12.7  -5.39755   CACAACCATAAAAAA             CACCGCC ATTT GGCGGTG              TTTTTGTATTGGCGC 100 49
         ppc NONE
HER31_RS17305 3809480 .. 3809523 -   -11  -2.53263   GGGATCCGTAAGTTA TCGGCAACGGTGGCGCTGGAT ATG ATCAGGCGCCACCTTCGC-GA TGAGCCGTTACTTGC  70 74
        ccmI 3791185 .. 3791204 - -12.2   -5.4833   CGAGCTAATAAAAAA            GCCTCTTC AATT GAAGAGGC             TTTTTTGATCCCGCA 100 48
        ccmA 3789886 .. 3789897 -  -2.2  -3.76224   CTCGCATTGACTAAA                CCTC TGCC GAGA                 ACTGATATTCAAGAC  51 9
        ccmB NONE
HER31_RS17225 NONE
        ccmD NONE
        ccmE 3787714 .. 3787730 - -10.9  -5.64274   GCAGTCATAAAAAAA              GCTTCCA TAT TGGAAGC              TTTTTTTAGATTTGC 100 56
HER31_RS17035 NONE
HER31_RS17030 NONE
HER31_RS17025 NONE
HER31_RS17020 NONE
HER31_RS17015 3756446 .. 3756471 - -10.5  -3.11325   GACATGCGAAGAAAG         TGCCAGTGAAG TGCG CTTCACCAGCA          AAATAGCTTTCAACG  73 130
HER31_RS16995 3746228 .. 3746245 -  -9.1  -4.61231   CTACACTTTGAAAAA             GGCGTCCC TAG GGG-CGCC             TTTTTTGTGTCTATT  90 44
HER31_RS16905 3726502 .. 3726522 -  -6.8  -3.46285   CAGGCGAAATATCAA            TGCGGGCT GATTA ACCCCGCA            GTCGGATCTGTTGGA  62 15
        trmA 3715988 .. 3716011 - -13.2  -4.85129   ACGATAGAGTAAAAA          GAAACCCGCC ATAT GGCAGGTTTC           TTTTGAAGCGATAAA 100 43
HER31_RS16860 3714405 .. 3714435 - -10.5  -4.46656   GGCACAATACTAAAA      CGGCACCTAACTTG AAGC CAAGTG-GGTGCCG       TTGTTGTCTCGAGTG  89 51
HER31_RS16845 3711054 .. 3711078 - -15.1  -5.38326   TCAAGCAAAGAAAAA          GGCGACGAATC TTC AATTCGTCGCC          AGTATACTACTTCAG 100 64
        mnmH 3709609 .. 3709622 -  -6.7  -3.01712   GTTGGGCTCGCAACA               GTTGC CATG GCAAC                AGGTTTTGCCGCCAG  58 334
        hslR NONE
        hslO 3695306 .. 3695321 - -10.4  -5.42259   TTAGGTGTAAAAAAA              GCTGCC CAAA GGCAGC               TAGTTATCAATGCAT 100 50
HER31_RS16755 3693080 .. 3693104 -    -8  -2.83164   GGATTGAGCACGATA          TCGATGATAT GAACG ACATCATCGA          TCAGTTCATAGCCTT  59 515
HER31_RS16735 3688439 .. 3688463 -  -7.2  -3.36878   GTCAGGCACGTACAA          GCAGTGGTTT AGCTG AAACCAATGC          TCACCAAGTGATTGC  62 134
HER31_RS16720 3686389 .. 3686421 -  -9.8  -4.13945   AGGGGGATTTCAAAA     GGGGCGA-AGCTCCC CTTT GGGTGCTGTCGCCAC      CGCGACATCCTCCCC  81 90
        nfuA 3685408 .. 3685431 - -15.4  -5.24129   CGGGCTCACAAAAAA          TGCCGGTAAG TAAA CTTACCGGCA           TTTTCGTATCTGAAG 100 55
HER31_RS16700 3681366 .. 3681386 - -11.9  -3.17075   GGCGGTTGAAGCGAA            CAAGGAGGC GAC ACCTCCTTG            TTGTTGATTACTCCG  83 33
HER31_RS16670 3676913 .. 3676928 -  -4.7  -3.49475   GCTACCGTTATACAA              CACCA TTATTT TGGTG               ATCTCGTCGGTAACG  52 418
        plsB 3669138 .. 3669153 - -11.8  -5.29782   CATAGCTATAAAAAA              GGCGGG TTAC CCCGCC               TTAACTTATTGGGTC 100 50
HER31_RS16630 3668090 .. 3668109 -    -2  -4.91712   TGTAATGGATAAAAA            TTACGCTC GAAA GAGCGATA             CAACGGCTGGGATTG  70 316
HER31_RS16600 3662637 .. 3662666 -  -2.1  -3.77119   GATCAACCAAGATAA       GCGCATTTGGAAA GCCC TTTGCAAGTGTGC        GTTAAAGGTAAGTGT  51 27
HER31_RS16595 3661256 .. 3661288 - -10.6  -3.20367   CAACAACTGCAGCAA      GGCATCAGGGTCGA GGTTA TCGACCGTGATGGC      ATGGTGTTGCTGGTG  73 48
HER31_RS16580 3659154 .. 3659173 - -10.7  -4.55625   ATTAAGACGACAAAA            CGGCAGC GAAGGG GCTGCCG             TTTTTATAGCTGCAG  93 56
        fliL 3651220 .. 3651241 -  -9.5  -3.53224   TATGGTGGCTGCAAA           CTCGCCCTAA AGA TTAGGGCG-G           TTACTTGGCTCAACC  75 41
HER31_RS16515 NONE
HER31_RS16510 3644124 .. 3644155 -  -6.6  -4.35116   GATCCCAGACGAAAA      GTGGCAACAG-GCTA ACC TAGCTCGGTTGCAAC      GCTCCCTGCAAAAGG  74 172
HER31_RS16500 NONE
HER31_RS16495 3641557 .. 3641584 -   -13  -5.22039   GTGAAAGTTAAAAAA        TATTAAAGGTAG TTAA CTACCTTTAATA         TTTATTTTTTATTTT 100 20
HER31_RS16480 3638444 .. 3638483 - -10.9  -2.65766   TCAAAGTGCAGACGA  TTGAGGAGTTGTTCACGC TGACT GGGCG-ACAACTCCTCAA  CGTGATGCTGCAGTT  74 117
HER31_RS16465 NONE
HER31_RS16460 3634236 .. 3634249 -  -2.4  -3.65902   CTTACTGCAGTTAAA               CCAT CAACTC ATGG                TAAAACGCTAAGTAA  49 7
HER31_RS16455 3633393 .. 3633412 - -13.6  -2.52543   AGTCTGTTTAATGTA            GCGCTCAG AGGC CTGAGCGC             TCGACTAAAGCGGTT  86 10
        coaD 3630573 .. 3630586 -  -8.1  -2.70275   GAAGGCGATAGAGCA               GGGTG GTAC CACCC                TTAAAGACTTTACCA  58 187
       coaBC NONE
         dut NONE
        slmA 3623714 .. 3623731 - -12.7  -3.76789   AACTGATAAAACTAA             GGCGCTC AATT GAGCGCC              TTTTTTATCTCTACG 100 55
HER31_RS16380 3621141 .. 3621158 -  -9.9  -4.84918   CTTACAAACAGAAAA             GCCATCA AAAT TGATGGC              TTTCAGTTACTTGTT  91 65
HER31_RS16360 3617880 .. 3617905 - -11.8  -5.60993   GCGGGTACAAAAAAA         CGGCCATCCG AGTTCA CGGGTGGCCG          TTAATTAGTTAGAGC 100 50
HER31_RS16350 3614339 .. 3614362 - -13.2  -4.24285   GACACAGCCAATAAA          TGGGGCTACG ATGT CGTAACCCCA           CTGGTAACACTGGCG 100 157
HER31_RS16345 NONE
        arsB 3612356 .. 3612373 - -12.7  -5.01845   GATAACAAGCAAAAA             GCCGCTC GAGT GAGCGGC              TTTATAGTGTATTGC 100 46
        rmuC 3609352 .. 3609371 - -10.8  -5.40072   TCCTCCGTAAAAAAA            TATCAGCC AATT GGCTGATA             TTTTTTTGTCTGTTT 100 49
         gmk 3608347 .. 3608367 -  -6.9  -4.35518   AAGTGTACATGAAAA            GCGTTATTG CGA CAATAACCC            TGCAAGCATAACACT  74 8
        rpoZ 3608012 .. 3608022 -  -6.8  -3.09823   CCTCCCAAAATTACA                 GGGT GCG ACCC                 TCTGCAATTGCAGCT  58 10
        spoT NONE
HER31_RS16310 3605442 .. 3605459 - -14.1  -3.78934   TTTCTCCTACAACAA             CGGGGGC CTAA GCCCCCG              TTTCTTTCAAACTGG 100 51
        trmH 3604563 .. 3604578 - -10.4  -5.63517   TTTGGAAACAAAAAA              GCGACC TTGA GGTCGC               TACATTAGAACTTAT 100 157
HER31_RS16300 NONE
        recG NONE
HER31_RS16290 3599557 .. 3599600 - -16.9  -2.89742   CTTAATTGGTACACA GCCAAACAATGCCACTGGC GGTTGA GCGAGTGGCATTGTTTGGT TTGTTGGTTAACAAC 100 46
HER31_RS16275 NONE
HER31_RS16270 3596825 .. 3596840 - -11.8  -4.49353   GTATAAGACAACAAA              GGCGCC CGTA GGCGCC               TTAATATCGTTACCC 100 49
        rluF 3595707 .. 3595728 - -14.5  -4.61873   TGGCATAAACTAAAA           CGGACAACC TGAT GGTTGTCCG            TTGCTATGTATTGAT 100 44
HER31_RS16260 3594344 .. 3594359 - -10.4  -4.90381   GCGAATATAAGAAAA              GGCACC TTCG GGTGCC               TTTTTTGTATCTAGC  93 54
        glnA 3590481 .. 3590500 -  -9.3  -5.75945   AGTGGTTAAAAAAAA            CCCACTC GCAATG GAGTGGG             TTTCTGTTATGGCGT 100 98
HER31_RS16245 3589834 .. 3589860 - -16.7  -2.78596   TATTGCCCCACCATA         GCCATTGCACC CAAAT GGTGCAATGGC         GGCCACACTAATTAT 100 33
        glnL NONE
        glnG 3586824 .. 3586855 -  -6.7  -4.46926   TACCTGACTACAAAA      GCTAATCTATGCA CTTTAT TGCATAAGTTAGC       CACTGATTTACCGTC  77 522
HER31_RS16230 NONE
HER31_RS16225 NONE
HER31_RS16220 3583095 .. 3583122 - -15.6  -4.20883   TAAAAACTCCGAAAA        GAACGGGTGGGC CTAG GCCCACCCGTTA         CCTGTCTTACTTAGA 100 32
HER31_RS16215 3582036 .. 3582055 - -11.4  -5.67063   CTTATTACAAAAAAA            GCCCCGAC CAAG GTCGAGGC             TTAATGATATTGCGA 100 61
HER31_RS16210 3581578 .. 3581598 - -13.3  -4.74103   TTTTGAACGCAAAAA            CAGAAGGGC AAG GCCCTCCTG            TTTGAGATGGTTTAG 100 105
HER31_RS16205 3579988 .. 3580004 -  -9.4  -5.86976   GTATAAAAGAAAAAA              GGCACC TCGAG GGTGCC              TGTTGTTAATTTGTA 100 48
HER31_RS16200 NONE
HER31_RS16195 3577813 .. 3577828 -  -3.3  -5.27477   ATTTTAAGTAAAAAA              TCACA ACTAAA TGTGA               TCAGTGTGGTGAGTG  77 258
HER31_RS16190 NONE
HER31_RS16185 3576486 .. 3576503 - -12.7   -5.5112   GGTACCAACAAAAAA             CGCAGCC AATT GGCTGCG              TTTTGCTGTGACGAT 100 55
HER31_RS16180 3574253 .. 3574276 -   -14  -4.86731   TGTCTTTAAATAAAA          TAAAGCCTCC GCTG GGAGGCTTTA           TCGTCAACCGTTGCG 100 42
HER31_RS16175 3573026 .. 3573041 - -10.4  -4.07618   CGGCCAACAATCAAA              GGACGC TGCG GCGTCC               TTTTTGTTGTCCTCG  82 44
        moaA 3570062 .. 3570074 -  -4.7  -3.21912   GCTGTAATTTATCAA                CCACC GAT GGAGG                CCAGATGCGGCGTGG  50 9
        moaB NONE
        moaC NONE
        moaD 3568782 .. 3568806 -  -5.5  -3.40299   GCACCACACCCATAA          CTAGCCTCCGG TAA CCGGTGGGAAG          AAAGCGACTTCATCG  56 1
        moaE 3568286 .. 3568305 - -10.7  -5.24129   TGCGGGCATAAAAAA            GGGCTCC TAGATG GGAGCCC             GATTATAGCGATAAC 100 53
HER31_RS16140 NONE
HER31_RS16135 3566716 .. 3566738 - -10.6  -2.80074   TCGGTGACAAGATGA           TGCCCTGC CAGTTGC GCAGGGCA           TTTTTTATGGCTTTG  74 329
HER31_RS16115 NONE
HER31_RS16110 NONE
HER31_RS16105 3562328 .. 3562344 - -12.3   -4.6644   AACACAGCCTAAAAA              GCTAGCG TAA CGCTAGC              CTTTGGTTGGTCGAT 100 73
        polA 3558020 .. 3558044 - -15.1  -5.50499   TTAGAGTCAAAAAAA          CCCCAGTCTTC AAA GAAGACTGAGG          TGCCAATTCTGGCGA 100 237
HER31_RS16085 3556289 .. 3556305 - -13.7  -5.02715   ACAGCAAACTAAAAA              GGGAGCC TGA GGCTCCC              TTTGTTATTGTTAAG 100 48
HER31_RS16080 3554632 .. 3554648 -  -3.7  -2.66634   GACTCTACCAGATTA              TGCTG ATTTTTG CAGCA              GAATGATGTCGTTGC  44 6
HER31_RS16075 NONE
HER31_RS16070 3553556 .. 3553569 -  -2.4  -3.02511   TGGATTTGTTCAAGA               TCTC TATTTT GAGA                GGGACTGTGCGCGCC  42 15
        hemN 3552010 .. 3552028 - -17.4   -5.0916   CGCTGAACACAAAAA             CGGCGCCC AAG GGGCGCCG             TTGTTATCGCAATGT 100 54
HER31_RS16060 NONE
HER31_RS16055 NONE
HER31_RS16050 3548792 .. 3548826 - -12.8  -3.14344   TATCTGCGTCACCAA     GGCGACAGCAGCAGCG AAG CACTGCTACTGGCGCA     AGCTAATGTTGCCAA  86 139
HER31_RS16035 3543840 .. 3543857 -  -6.9  -4.52873   GCTTGATAAAAAGAA             CGCTGGC CTAA GTCAGCG              TTTTTTGTTTTTAAC  77 36
HER31_RS16025 3541730 .. 3541740 -  -4.6  -3.21465   AAGTTAAAGCCAATA                 CCGC TGG GCGA                 GACTACTTCGCTTTG  50 424
HER31_RS15995 NONE
HER31_RS15990 3534769 .. 3534787 -  -7.4  -2.77899   GGCTGTGATTAATTA             GCCTTTCT TTA AGAATGGC             TTGGGATCGATAGCG  58 4
HER31_RS15985 NONE
HER31_RS15980 3532561 .. 3532573 -  -2.6  -3.34344   CTATTGGCGAATGAA                CAGC TGGTT GCCG                TGGATGAGTTGTTGC  46 246
        rsmD 3519830 .. 3519866 -  -8.1  -3.36839   GTATCAAACAAGAGA    TTGAGTTTGCTGCTA TTAGCTC TAGCTGCAAACTCGA    TAGCACGTTCTCAAA  65 85
HER31_RS15920 3519449 .. 3519473 - -14.3  -3.29511   GTTAGCCTGTTACAA          CAAAGCCGTCC ATT GGGCGGCTTTG          TTGATCTTAGCGTGG 100 56
HER31_RS15910 NONE
HER31_RS15905 3516444 .. 3516473 - -16.6  -3.30701   GTGGATTAAAGGGAA       GCACTAGCCATC TGCACT GATGGCTAGTGC        CCACTGATCAGTGGG 100 33
        mtnC 3514164 .. 3514184 - -11.1  -4.33281   ATCTGAAACAAATAA            GGGCGCC ACTAATG GGCGCCC            CTGTTGTAACGATTA  90 46
HER31_RS15840 3497401 .. 3497416 - -10.4  -3.69449   CAATATTCTAAAAGA              GCGACC ATTA GGTCGC               TTTTTTAATGGCTTT  78 108
HER31_RS15825 3493730 .. 3493748 - -14.6  -4.87665   CCGCATCGACAAAAA             GAGCAGCC CAA GGCTGCTC             TTTTTGTGACGACTG 100 47
HER31_RS15815 3491052 .. 3491108 -   -14  -3.90112   GCCTGGGTAAGTAAA CTTACAGAGCCACATAAAAAACGCCGC TTTT GCGGCGTTTTTT-TATGGCTGTGTACC AATTAAGTGTTGTTC 100 223
        dnaA NONE
        dnaN 3470789 .. 3470799 -  -8.2  -2.82516   TTGTTGATCATCAGA                 GCCG CAT CGGC                 ATAACCACATATACC  60 10
        recF NONE
        gyrB 3467235 .. 3467250 - -10.4  -5.64274   TCAGTGACAAAAAAA              GCAGCC CGAA GGCTGC               TTTTCTATTAGAGCT 100 64
HER31_RS15675 3460483 .. 3460513 - -15.6  -3.20435   GTAATTACTGAGTAA       CTAAAAAGGGAGCC ATT GGCTCCCTTTTTAT       TGCTGCTAAAAAATT 100 339
        pepQ 3451804 .. 3451830 -  -2.4  -3.84901   GGCACCAAAAACGAA        GTGGCCATTAA GCGAGA TTAA-AGCCAC         GAGTAAGGTTATCGA  51 6
HER31_RS15645 3451167 .. 3451186 -    -5  -3.67112   AGCATACTCCAACAA            CGATGGATG TTT CA-CCACCG            ATGCAAGAGATTAGT  57 36
HER31_RS15640 NONE
        hemG 3448865 .. 3448882 -  -3.4  -3.36785   CGATATGGTAACGAA             TGC-CGG TCAAG CCGCGCA             GTTACTCAAGTCGAT  47 257
        hemG 3447985 .. 3448016 - -13.8  -4.62471   AACCGATAGATAAAA      CCAAACGGGTTGCC ATTA GGCAACCCGTTTTA       TTCGTTCAGTTAGAC 100 94
HER31_RS15620 3447003 .. 3447020 - -12.7   -4.1964   GCCAAGATCCCAAAA             GCCTCGC AGTC GCGAGGC              TTTTTTATGGCTGCG 100 309
HER31_RS15595 3441432 .. 3441449 - -14.1  -4.52857   ATTGCTCATAGAAAA             GCCGGGG CGAT CCCCGGC              TTCTAGTTGGTCGAT 100 132
        dprA NONE
HER31_RS15585 3439992 .. 3440005 -  -9.5  -4.10925   ACACAGTCCCCAAAA               GGCGC CGTA GCGCC                TGTTGGAGTGGCTCC  81 40
HER31_RS15580 NONE
        purE NONE
HER31_RS15570 3437897 .. 3437914 -  -2.7  -2.88544   TTGGATTGGCATAGA             TTCCTTT CTAT ATAGGAA              GAGATTAACTGCGAA  42 30
        hemF 3436916 .. 3436942 - -15.2  -5.08169   ACACAGCCTAAAAAA         GGGTACCAGTGT TAT ACGCTGGTACCC         AATATCGACGCAAAT 100 62
        aroE NONE
HER31_RS15555 3435083 .. 3435111 -    -6  -3.77014   ACAAAAGCATTCAAA        CAACACTCTCCA GTACT TGGTGAACGTTG        CTATGTCGAAGAAAG  62 509
HER31_RS15545 3432950 .. 3432965 -  -3.2  -2.72649   ATTTCATCAGACAAT              CTGTGT GAAC ACTCAG               CGCAAAACAAGTAAT  43 45
HER31_RS15540 3432806 .. 3432816 -  -5.4  -3.28712   TTTTCCTGGTGACAA                 CTTC AAA GAAG                 TTGGTGGGTCTGAGT  56 27
HER31_RS15535 3432635 .. 3432679 -  -6.1  -5.42259   CTAGGCCTAAAAAAA GCCAAAGGTAAATTG-TTCTA TTATC TAGAAGCAATT-AGCTTTGGC TTCTCATCCCCAAAC  91 54
HER31_RS15530 3429363 .. 3429383 -  -6.1  -3.38291   TCTACAATCTCACAA            GCTCTGCGA TAT CCGCAAAAC            CACTTGGGTGTTGTA  59 28
         rrf 3429165 .. 3429185 - -15.5  -5.27477   ATTTGAATGAAAAAA            GCTCGTCTC AAA GAGACGAGC            TTTAATCTAAATTGG 100 42
HER31_RS15520 3429036 .. 3429056 - -16.9  -5.42514   CCAGAAACGAAAAAA            GCCCTGTCC AAA GGACAGGGC            TTAATCGAAATAATG 100 39
HER31_RS15480 NONE
HER31_RS15470 3418209 .. 3418234 - -16.3  -3.66288   CAGCGCTGAATACAA         CAAAGGATGGC CGCA GCCATCCTTTG          TTTTCGCAGTTAACC 100 55
HER31_RS15445 3413519 .. 3413572 - -11.3  -3.06796   TTTTACCGTATGTAA CTGCATCTGCACTATCAATTCAAAC ATTT GTTTAAATCGATAGTGCAGAAAAAA CACCCAGATCACAAA  79 89
HER31_RS15440 3412606 .. 3412623 -  -3.4  -4.96848   TCTGTTATACAAAAA             GTGGCCC AAAGA GGGC-AC             GATTGCGGTTAAACG  73 162
HER31_RS15415 3406166 .. 3406194 -  -7.3  -2.53715   GTTAGCAGTATGAAT        TGTAAGGCCGAGC ACT GCTCGGCCTTTTG        CTGATCTTAAAGCAA  57 77
HER31_RS15405 3403756 .. 3403772 - -13.7  -5.93252   GCTAAAAACAAAAAA              CCGCAGC TAA GCTGCGG              TTTTAACGGCATGAA 100 52
        prlC 3401545 .. 3401566 - -14.5  -5.02201   AAAATATTACAAAAA           CGCCCATGT GGTA ACATGGGCG            CTATTGACATGGTAA 100 63
HER31_RS15395 3400481 .. 3400493 -  -7.7  -5.11937   AAGAACTCTAAAAAA                TCTGC TCG GCAGA                GTAAAAGATAGCGCC  87 114
HER31_RS15390 NONE
HER31_RS15385 3399231 .. 3399245 -  -2.9  -3.96148   TTCGGCCAGCATAAA               TAAAC TCCTT GTTTA               AAAGCCTCTACTGTC  54 61
        ftnA 3398655 .. 3398674 -   -10   -5.5604   TTAAGCAACAAAAAA            GCAGTGCC TTAG GACACTGC             TTTTGGCAAAAATGG 100 48
HER31_RS15375 3397152 .. 3397171 -    -7  -3.66921   AAGGGGAATTCCAAA            GGGGGCAG AGCT CCCCCCCC             CCTAATGCATACAAG  64 142
HER31_RS15365 NONE
HER31_RS15360 3393803 .. 3393813 -  -2.4  -3.76482   CCAGATTACGAACAA                 GGGC ATT GCGC                 AAAAGATATGTCAGA  51 50
HER31_RS15355 NONE
HER31_RS15350 3390901 .. 3390926 - -14.1  -5.25906   ACAAACCAATAAAAA         CGGCCAATCAC CGCA ATGATTGGCCG          TTGATTTAGCGTTAG 100 50
HER31_RS15340 3387540 .. 3387554 -  -8.6  -3.78934   TTTTTTTCATAACAA               CTCCTA GTG TAGGAG               GCCCAATTAATTTAG  75 57
HER31_RS15335 3386757 .. 3386770 -  -5.3  -4.11033   AGTAAACAGGATAAA               TACGA CTCT TCGTA                ACTGTAAATATTTAG  63 37
HER31_RS15330 NONE
HER31_RS15325 3385457 .. 3385474 -  -6.9  -5.64274   CTATCCATAAAAAAA             TGGGCTC AAAA GAGCCCG              TTTCTTATTACTTTA 100 44
HER31_RS15315 NONE
HER31_RS15310 3370323 .. 3370342 -  -4.2  -3.57119   GACATACTGGGGAAA            TTGCAGCG AAAA CACAGCAA             ATACGCTATCGCTTA  53 111
HER31_RS15305 NONE
HER31_RS15300 3368860 .. 3368892 -   -10  -5.25735   GCAAAAAAGCAAAAA     CAGCGACTGATCACC CATA GGTAAT-AGCCGCTG      TTTGTTAGAACAACA 100 44
HER31_RS15290 3365971 .. 3366004 - -16.9  -3.08446   TAATTAAATAATAAG     GAAATTGAAGGGGAG CGTA CTCCCCTTCAATGTC      GGGGGTATTACTGCA 100 33
HER31_RS15285 NONE
HER31_RS15280 3364528 .. 3364560 - -23.7  -2.52464   TGTTCCTGGAAGTGA      TCAAATACGCCACCC ATT GGGTGGCGTATTTGA      TTCAAACTAAAGGTG 100 51
HER31_RS15275 3363544 .. 3363560 - -13.7   -5.2189   TTAACGATCAAAAAA              CGCAGCC ATT GGCTGCG              TTTTTATTGTTGGTA 100 53
HER31_RS15255 3358104 .. 3358138 - -14.3  -3.26932   ACAACCACAACCTAA     CCCAGCAAGCCGGAC CTCGT GTCCGGTTTGTTGGG     TTAATGACGCTGTTA  95 282
HER31_RS15240 3354015 .. 3354037 -  -7.7  -3.21416   TATCCTCATCATCAA          CTGCTGCGAC ATGG GCCGCAGC-G           AACGGTGACATTGTG  64 410
HER31_RS15235 3353435 .. 3353461 -  -3.6  -2.75481   TCGCAAGTGCAAGTA         GTGGGCAGCGAC TAC ATAACTGCCCAA         TCCATAGAGATCTCA  43 50
HER31_RS15230 3352243 .. 3352253 -  -8.2  -5.08824   TTCTCACCCAAAAAA                 CCGC AAT GCGG                 TGTGTGAAAAGGGTG  87 53
HER31_RS15225 3351233 .. 3351245 -  -4.9  -3.72576   TCTTCTGCCAGTAAA                TTTCT CAT AGAAA                ATCACCCAGACACTT  56 188
HER31_RS15215 3348859 .. 3348884 -  -9.7  -4.92314   ACGAAGTTACAAAAA         CAGACCGGACT CGAA AGCCAGGTCTG          TCATGAAAATGTACT  93 57
HER31_RS15210 3348180 .. 3348193 -  -8.1  -3.53012   GGCGGCGGTGGCAAA               GGTGG TCCA CCACC                AGGAGGCGGTAAAGG  67 266
HER31_RS15190 3343635 .. 3343650 -  -8.2  -5.26875   CCCCTAACTAAAAAA              CCGGCC GCCA AGCCGG               TTTTTTTAGGCTGTG  91 342
HER31_RS15180 3342500 .. 3342512 -  -3.3  -4.25104   CTTGTCTCAGCAAAA                GCGGT TAC AACGC                ACCATCAAAACCAAG  60 17
HER31_RS15175 3341570 .. 3341594 - -14.3  -5.92337   ACACAGCAAAAAAAA          CGCCCATCGAC AAT ACCGATGGGCG          CTTAGTTTGGTGTGG 100 52
HER31_RS15170 3339554 .. 3339579 - -14.7  -3.53091   ATCCGCTGTGCCAAA         CGCTCTCGCCA TCGG TGGCGGGAGCG          TAACAAGTCATCGCT 100 39
HER31_RS15160 3337389 .. 3337400 -  -5.8  -3.49209   AGACTAAACCTACAA                GCGA CCGA TCGC                 AAAATCGACATCGAT  57 498
HER31_RS15145 NONE
HER31_RS15140 3334148 .. 3334167 - -13.6   -4.8667   CACAGCCTACAAAAA            TCCCGAGC TTGT GCTCGGGA             TTTTTATGGTAACTA 100 38
HER31_RS15120 3326488 .. 3326499 -  -2.2  -5.40474   ATGGTTCCAAAAAAA                CGTC GCCA AACG                 CAGCCATTGCTGTTG  77 41
        cyaY 3315393 .. 3315415 - -11.3  -3.56704   GCGCGATCAAAGCAA           CCAGTGGCA GTTAG CGCCACTGG           ATAGGTAGCAGCATT  85 40
        hemC 3311934 .. 3311950 -  -2.2  -3.08996   CAGGTCGAGTTAACA              GCAGGT GCATT ACTTGC              TTCCGTATACCTTTT  42 18
HER31_RS15060 NONE
HER31_RS15055 NONE
HER31_RS15050 3308362 .. 3308374 -  -4.8  -3.42257   CCGCAAACAGATCAA                GGTG CAAGC CACC                ACCGGACTGCTGATT  52 403
        recQ 3304889 .. 3304911 -    -4  -4.23781   TTGAGCAAAACCAAA           CGCCGGAAGC CAA GCTTACGGTA           GCGATACAACAGGCT  61 370
        leuA NONE
        leuB NONE
        leuC NONE
        leuD 3298530 .. 3298547 - -11.3  -4.02005   AAAAGCGAACAAGAA             GCCCGTT GCTA AACGGGC              TTACATGCCATTAAC  91 36
HER31_RS15005 3296599 .. 3296620 - -17.3  -4.43477   CCCAGCCAACCAAAA           CGGCCTCGC AATC GCGAGGCCG            TTTTATCAAACGAAC 100 47
HER31_RS14995 NONE
HER31_RS14990 3292734 .. 3292748 -  -4.2  -3.85909   GGATTGAAAGTCAAA               CTGAGC GTG GCTCAT               TCGGTCACCTTAGCT  55 22
HER31_RS14985 3291748 .. 3291771 -  -2.5  -3.52519   AGCATCGATAAAAAT          TCCA-ATCAG TAGCC CTGACCTGGA          GCTAAAGAAAGCGGC  48 7
HER31_RS14980 3291032 .. 3291057 -  -9.7  -3.98282   TTCAGATTAATGAAA         CCAAGGCAACG GTTC CGCTGCCTCAG          TCAAAAACCTTGTTA  81 38
HER31_RS14975 3290681 .. 3290722 - -19.7  -2.62184   CCGCTGGTGAGATTA CCAAC-AAAAAGCGCCGCTA TGA TAGCGGCGCTTTTTTGATGG CAATCTGAAACCAAT 100 51
HER31_RS14965 3289221 .. 3289244 -  -3.7  -2.62293   AAGGCTAATACTAAC          GCAGCCCCG CTTAAT CGGAGTCGC           TAGCCATTAATCATA  44 32
HER31_RS14960 3288468 .. 3288479 -  -7.2  -3.66999   AGCTACCGAGCCAAA                GCGG TCTC CCGC                 CGTGATGATCTTACC  67 334
HER31_RS14915 3277236 .. 3277261 -   -12  -4.46155   GACATAGCCATAAAA         TAGCCACACT GGATTT AGTGTGGCTA          TTCAGAGAAGCCATG 100 79
HER31_RS14900 NONE
HER31_RS14895 3273794 .. 3273804 -  -3.2  -3.36983   AAAATTGTGAATTAA                 GTCA GAA CGAC                 TTAGTGGTTATGAAC  48 26
HER31_RS14890 NONE
HER31_RS14885 NONE
HER31_RS14880 NONE
HER31_RS14875 3268832 .. 3268875 -  -3.2  -3.60074   GATAAATCTGGGAAA CAGGATGGGCTTGCTAATAA TTTA TTATTAACAAGTCATTACTG TAAATCTGGGTATCA  51 411
HER31_RS14870 3266000 .. 3266019 - -12.2  -4.32857   TGGTTTAAACATAAA            GGGTAGGA TCGT TCCTACCC             TATTTTTTAGCCTTA  95 38
HER31_RS14860 NONE
HER31_RS14855 3263757 .. 3263791 - -14.5   -3.0558   TGAGATTAGAAACGA     CAAAGGCTCATTCGC TGTTT ACGAATAAGCCTTTG     GTTATGAGTAGTTGT  89 67
HER31_RS14850 3263162 .. 3263188 -  -3.1  -3.02881   TAGTGAACGAAATTA         GTTAGTTAATA ATATA TATCATCTAAC         CGTTTTAGTGCCTCA  45 54
HER31_RS14845 3261866 .. 3261892 -  -8.1  -5.04868   TCAAAGCAAATAAAA        GCCAGCA-TCCT GAAT AGGAATACTGGC         GATGTTAGAACGGAG  87 107
HER31_RS14840 NONE
HER31_RS14835 3259920 .. 3259933 -  -6.7  -3.93166   TCCCGAAAAAACGAA               CACTC GCAA GAGTG                AAAAAACGATTAGCC  68 197
        ilvC NONE
HER31_RS14815 NONE
        ilvM NONE
HER31_RS14805 3253146 .. 3253158 -  -6.9   -3.4072   CAGTGGCTACTACAA                CACCG TAG CGGCG                GTGTGCGCTTCAAAG  61 7
        ilvD NONE
        ilvA 3249678 .. 3249696 -  -7.4  -5.51402   ACACAGCCAAAAAAA             GGGGGA GAACCAA TCCCCC             GAGTGTTCAGCGATC 100 48
HER31_RS14785 3244362 .. 3244376 -  -3.6  -2.83519   CGGATAAATACATCA               GTAAAT TTC ATCTAC               GCCTCTACAGCTTAA  43 30
HER31_RS14780 3241241 .. 3241289 -   -17  -2.95298   CTTAGTTAGTACACA GCCAAAAAAAACGGCTTCAACC ACCTA GGTTGAAGCCGTTTTTGTTTAC CACGCTTGTGGCTAG 100 37
HER31_RS14770 NONE
HER31_RS14765 3237113 .. 3237138 - -11.9  -4.45765   GCTAAAAGTAACAAA         CCCCTGC-CAGC ACA GCTGAACAGGGG         TTAAAAGCAGGGAGT 100 63
HER31_RS14755 3235443 .. 3235457 -  -2.8  -2.52543   ATGGCGTTGAATCTA               GCTCAA CCG TTGAGG               GGTTATTGACTATCA  40 28
HER31_RS14750 3234131 .. 3234149 - -13.1  -3.76952   GCGACCTAAGGCAAA             GGGCGCC GTAAA GGCGCCC             TTTGTTTTCGTTGTC 100 74
        modA 3232729 .. 3232742 -  -8.1  -2.78596   GATGGTGCTAGCACA               GCAGC CAGA GCTGC                TGGATAACGAGCAGA  59 304
HER31_RS14735 3231161 .. 3231177 -  -2.4  -4.42513   AATGACAAATACAAA              TTTTAA ATTTA TTAAAA              TGTAACTTGCGAGTG  59 393
HER31_RS14730 3229179 .. 3229202 - -13.2   -4.2349   CCTTGATAGGGAAAA          CCAAGGGAAC CTTG GTTCCCTCGG           TGTTGATATTGGCTT 100 40
HER31_RS14725 3228285 .. 3228317 - -11.5  -3.87104   TGCAGACTACAAGAA      TCAGCTAACAAGATT AAT AACCTTGTTAGCTTA      AGATAAATATGAATA  91 58
HER31_RS14720 3226970 .. 3226982 -  -3.4  -3.11701   CTGACCAAAAAATAG                CGAA GGGTG TTCG                TAGTTGCTTTTACTT  45 130
HER31_RS14710 NONE
HER31_RS14705 3222342 .. 3222368 - -17.4  -5.28166   CAAAACCAATAAAAA         TGCTGGAGCACC AAG GGTACTCCAGCA         TCTAGTGCGACTTTC 100 49
HER31_RS14700 NONE
HER31_RS14695 NONE
HER31_RS14690 NONE
        dmsB 3215335 .. 3215363 -  -5.1  -5.08088   AATTCTCAACAAAAA        GGGTCGACCACTG TTA CGGAATTCGACCC        TTATTTTTCTTATTT  79 51
HER31_RS14680 3214620 .. 3214643 -   -11  -2.71263   AATGGGGTTGAATGA          TGCCATAGCG TATA CGCAATGGCA           TCCATCAATAACATC  74 78
        modB NONE
HER31_RS14670 3212811 .. 3212823 -  -4.1  -3.32647   GCGGAAGTAGATTAA                CCACA GTA TATGG                GATCTGAGCCGGAGT  50 264
HER31_RS14665 NONE
HER31_RS14660 3209991 .. 3210029 -  -8.3  -3.21199   TAGCGATTAATCGAA  GCCGAGTGATGC-ATATT ATTA AATATTGCAGCACTCGGT   TTTTTGTCGTTAAGC  67 165
        betT 3206138 .. 3206157 - -16.4  -5.16071   AAGCAGTAACAAAAA            CGGCGCCC CAAG GGGCGCCG             TTTTTTATGGCTTAC 100 51
         rep NONE
HER31_RS14635 NONE
HER31_RS14630 3203362 .. 3203380 - -14.6  -4.64766   TGCAGATGCGAAAAA             GCCGCTCT AAA AGAGCGGC             TTTTTCTGAATAGTG 100 39
HER31_RS14560 3174936 .. 3174949 -  -2.4  -3.34398   GTCCCCGGTTAAACA               TGGT TACTCT ACCA                AGCCCCATTCTTTAA  45 15
HER31_RS14555 3172837 .. 3172858 -  -2.3  -3.25823   GCGTCCTGATATCAA           CCTGAGTAA CGGC TTAGTCAGA            TTGATATCAGCCGCA  44 46
HER31_RS14540 NONE
HER31_RS14535 NONE
HER31_RS14530 NONE
HER31_RS14525 3167331 .. 3167343 -  -7.7  -3.30124   GTCGATGGGTCATAA                CACCT CCT AGGTG                CCGCCCATCCTTATC  65 166
HER31_RS14520 NONE
HER31_RS14515 NONE
HER31_RS14510 NONE
HER31_RS14505 3162563 .. 3162582 - -11.4  -5.65927   TAGCCAAACAAAAAA            GCCCCACC AGCA GGTGAGGC             TTAATGAATTGTTAA 100 50
        ubiA 3161300 .. 3161314 -  -7.1  -3.91897   TTTGCTATCGATAAA               GCGCA GTGGT TGCGC               TCAAGACAAATAGCA  70 43
        rhlB NONE
HER31_RS14455 3152388 .. 3152405 -  -9.8  -3.60475   AAGGGGGATTCCAAA             GGGGGC GGAGCT GCCCCC              TAATGCATACAAGAA  77 138
HER31_RS14450 3150610 .. 3150630 - -15.4  -4.92385   CACAGCCAAACAAAA            GGGCCGCC TCAAT GGCGGCCC            TCCAAATCTGATCGT 100 51
HER31_RS14440 3148813 .. 3148832 - -11.4  -3.42354   CATGCTAATGCACAA            GGCCAGAG TTAA CTCCGGCC             TAATCCGCTAATTGT  85 50
HER31_RS14380 NONE
HER31_RS14375 3136789 .. 3136802 -  -8.1  -3.40522   ATGTTTCGAGGACAA               CAGCG CCAT CGCTG                CGTCACTCGATCAAG  65 365
HER31_RS14365 3136120 .. 3136146 - -15.2  -4.70515   CACAGCCAAAAGAAA         CCCCAACAACGC GCG GCACTGTTGGGG         TTTGTCTTTATTGGG 100 44
HER31_RS14360 NONE
HER31_RS14355 NONE
HER31_RS14350 NONE
HER31_RS14345 3131428 .. 3131449 - -14.5  -2.70932   TGTTGTTGCCAACCA           GCCACACTC AATC GAGTGTGGC            TTTTTTATGGCGGTG  87 344
        rpmE 3120758 .. 3120774 - -15.1   -5.5353   CACAGCAACAAAAAA              GGCGCCC AAT GGGCGCC              TTTTTTCCGTTCGGT 100 52
HER31_RS14285 3117729 .. 3117749 - -12.6  -5.39755   CACAACCATAAAAAA            CGGCTGCA ATTAA TGCAGCCG            TTTTTATATCTGTCA 100 72
HER31_RS14275 3114506 .. 3114519 -  -8.1  -5.85737   ATATTAAGAAAAAAA               TCCGC TGCG GCGGA                TTTTTGTTTTGGGCA 100 475
        metB NONE
        metL NONE
        metF NONE
HER31_RS14245 3107829 .. 3107854 - -17.7  -4.46926   GAGCCTATTATAAAA         CAACCGCCAAG GGGT CTTGGCGGTTG          CAGTTCGTGTGGTGG 100 42
HER31_RS14240 NONE
HER31_RS14235 NONE
HER31_RS14230 3104872 .. 3104892 -  -2.5  -3.38768   CCATAGTAGCCAGAA            TTAGCCGTA ATT CACAGCGAA            CGCACGAGGGTAATC  46 16
HER31_RS14225 3103194 .. 3103207 -  -2.4  -3.05844   TTGTTCATTCCAATA               CTGT CAAAGC ACAG                GCTAGGCTGGCTCAG  42 79
HER31_RS14220 3102475 .. 3102492 - -12.7  -3.97622   GCATTGAAAATACAA             CGGCACC TTGA GGTGCCG              TTTTTGTCTCTGCAT 100 60
HER31_RS14205 3099523 .. 3099546 - -18.2   -3.6849   ATCCAATGCGAACAA          CAACGGCGCC TTTA GGCGCCGTTG           TTGTAGCTGCTGTAA 100 90
HER31_RS14195 3094998 .. 3095020 - -13.5  -4.79384   ATAATAAAACGAAAA           CAGCCCAGT GATTA ACTGGGCTG           TTTGGTCACGTTAGA 100 83
HER31_RS14190 3094260 .. 3094274 -  -5.7  -2.82933   GCTCAATTTACCACA               TGCTG TTGCT CAGCA               CACTCATTGGCTGGT  50 29
         ssb 3093490 .. 3093506 - -13.7  -4.92385   CACAGCCAAAGAAAA              GCCCAGC AAT GCTGGGC              TTCAATGTCATTAAT 100 66
HER31_RS14175 3089987 .. 3090011 - -14.4  -5.26316   CCACTCCATAAAAAA          TGTCAGCCAG ATTAA CTGGCTGACA          TCTCAAGGCTTAAAG 100 67
HER31_RS14130 3079920 .. 3079934 -    -7  -3.60475   AAGGGGGATTCCAAA               GGGGGC GAA GCTCCC               CTCTAATGCATACAA  64 265
HER31_RS14125 NONE
HER31_RS14120 NONE
HER31_RS14115 3075591 .. 3075631 -  -7.1  -3.01912   CTACATTGATAGATA TCAAAGAAACCACATTCA TCGACC TG-ATGCGGTTGCTTTGA  TGCCGTCGGCTAAGC  60 323
HER31_RS14110 3074623 .. 3074641 -  -9.6  -2.89564   GCTCTAGTTCAGATA             GTTATGCC GCT GGCACAAC             AGTTAGCCGGGAGGA  70 8
HER31_RS14105 3072110 .. 3072128 - -10.4  -4.10007   AGAACCCCCTGAAAA             CCGTAAAT TTG ATTTACGG             TTGCGACTAACACTG  82 118
HER31_RS14100 NONE
HER31_RS14095 NONE
HER31_RS14090 NONE
HER31_RS14085 NONE
        mshL NONE
HER31_RS14075 3066996 .. 3067011 -  -5.4  -2.78463   ACGTTGGCCACCACA              GCCACA GCAC TATGGC               CAGCAGCAACACAAC  50 169
        tadA NONE
HER31_RS14060 NONE
HER31_RS14055 NONE
HER31_RS14050 NONE
HER31_RS14045 NONE
HER31_RS14040 NONE
HER31_RS14035 NONE
HER31_RS14030 NONE
HER31_RS14025 NONE
HER31_RS14020 3054936 .. 3054979 - -13.2  -3.16564   GGCTCACTTTACCAA CGCCCCCATGGTG-GCACAAG GCG CTTGTGGTCACCATGGGGTTG AAACAGCGATATAGG  91 55
HER31_RS14015 NONE
        mreC NONE
        mreD NONE
HER31_RS14000 NONE
         rng NONE
HER31_RS13990 NONE
HER31_RS13985 NONE
        tldD 3044076 .. 3044092 - -12.3  -5.08169   ACAGAGCCTAAAAAA              GCGAGCT CAG AGCTCGC              TTTTTTATCGAATGG 100 46
HER31_RS13975 NONE
HER31_RS13970 NONE
HER31_RS13965 NONE
HER31_RS13960 3038695 .. 3038706 -    -3  -3.65201   CAAGATGGTCAATAA                TCAA GACT TTGA                 AGATGATTGGATCAG  49 484
        pmbA NONE
HER31_RS13945 3036184 .. 3036212 -  -3.2   -4.4767   CCACCCACCACAAAA       GTTT-GCACGCGCC TTT GCCGC-TGCCAAAC       AGCAAGGCTATCGAC  64 483
HER31_RS13935 3034448 .. 3034458 -  -4.6  -4.33258   ACCGGCAAAGACAAA                 CCGG TTG CCGA                 TTTTTTCTTACAGCA  66 503
HER31_RS13875 NONE
        mlaE NONE
        mlaD NONE
HER31_RS13860 NONE
HER31_RS13855 NONE
HER31_RS13850 NONE
        murA 3022499 .. 3022519 - -14.1  -5.24129   GCTGGGTATAAAAAA            GGAGAAGCA TCA TGCTTCTCC            TTTTTTATTGAAGGT 100 51
HER31_RS13825 NONE
        rplM NONE
        rpsI 3016950 .. 3016967 - -12.7  -5.64274   TCAGCCATAAAAAAA             CCCAGCC ATAA GGCTGGG              TTTTCTGAAGACCAA 100 55
        petA NONE
HER31_RS13805 NONE
HER31_RS13800 3014131 .. 3014158 - -16.4  -3.42395   TTTATCACTGAAATA        GTAAGTGGGAGC ATGA GCCCCCACTTAC         CCAAGCGGTAGATTG 100 58
        sspA NONE
HER31_RS13790 3013036 .. 3013052 - -10.1  -5.69262   CTAGAAAAACAAAAA              CCGCCTC TAG GAGACGG              TTTAGTTAAGTAACT 100 40
HER31_RS13785 3012345 .. 3012364 -   -10  -5.80003   GCAATAAACAAAAAA            GGCCACCT ATAT AAGTGGCC             CTTTGGGGGGAACGC 100 50
HER31_RS13780 3010256 .. 3010271 -  -3.2  -2.72649   ATTTCATCAGACAAT              CTGTGT GAAC ACTCAG               CGCAAAACAAGTAAT  43 45
HER31_RS13775 3010112 .. 3010122 -  -5.4  -3.28712   TTTTCCTGGTGACAA                 CTTC AAA GAAG                 TTGGTGGGTCTGAGT  56 27
HER31_RS13770 3009941 .. 3009985 -  -6.1  -5.42259   CTAGGCCTAAAAAAA GCCAAAGGTAAATTG-TTCTA TTATC TAGAAGCAATT-AGCTTTGGC TTCTCATCCCCAAAT  91 54
HER31_RS13765 3006670 .. 3006690 -  -6.1  -3.38291   TCTACAATCTCACAA            GCTCTGCGA TAT CCGCAAAAC            CACTTGGGTGTTGTA  59 28
         rrf 3006465 .. 3006500 -   -17  -2.87211   ATTTTGGTGCAGATA    CGAAAAAGCCCGTTCC TTTC GGAACGGGCTTTCTCT     AAATAAGTGTCTGAC 100 34
HER31_RS13755 3003776 .. 3003798 - -12.2  -4.25566   AACAACGAGCCAAAA           TCATTAAGTC AAA GACTTAATGA           TTTCAGACAATCTGT  95 72
HER31_RS13750 3000610 .. 3000630 -  -6.1  -3.38291   TCTACAATCTCACAA            GCTCTGCGA TAT CCGCAAAAC            CACTTGGGTGTTGTA  59 28
         rrf NONE
HER31_RS13740 3000208 .. 3000228 - -16.9  -5.42514   CCAGAAACGAAAAAA            GCCCTGTCC AAA GGACAGGGC            TTATTCGAAATAATG 100 39
HER31_RS13735 NONE
HER31_RS13730 2997978 .. 2997994 -  -3.7  -3.02144   CCACTCCGCCCAAGA              CTACTCC ATT AAAGTAG              AACGGTAGTCACCTG  47 9
HER31_RS13725 NONE
HER31_RS13720 2996040 .. 2996057 -  -9.1   -5.0133   TATTGTTGCAAAAAA             CGACACC CGAA GGTGCCG              TATTGAGTAATGTGA  93 45
HER31_RS13715 NONE
HER31_RS13710 NONE
HER31_RS13705 NONE
HER31_RS13700 2991242 .. 2991263 -    -8  -5.03994   CGCTAGATACAAAAA           CGCCTAAC GATTAA GTCAGGCG            TTTTTTGTGGCAGCT  87 40
         mdh 2989521 .. 2989538 - -12.7  -5.75599   CAAAGCATAAAAAAA             CCGACGC ATCA GCGTCGG              TTTGTTAGCACTAGC 100 52
HER31_RS13670 NONE
HER31_RS13665 2983049 .. 2983064 -  -4.6   -3.0497   AGATGATTTTGAACA              CCTGCT TCAC AGCTGG               CTTGAGTTTCTAGGC  49 46
HER31_RS13655 NONE
         def NONE
HER31_RS13645 2980441 .. 2980465 -  -7.3  -3.74224   GCTAAATTAGTTAAA          TCAAATCAATT GTG AATGGATTTGA          GTGCGAGCGCCACTA  68 1
        lpoB 2979779 .. 2979803 - -18.7  -3.85522   AACTCACTAGAACAA          CAAAAGGGGCC AAC GGCCCCTTTTG          TTTTTGCAGTATGTT 100 39
HER31_RS13630 NONE
HER31_RS13625 2977108 .. 2977140 - -14.4  -3.73122   CACAACAAGCCTAAA     GCAAAAAGGGTAGCC AAAT GGCTACCCTTTTT-C      TTGAGCTTACAAATC 100 32
HER31_RS13610 2973927 .. 2973944 -  -3.3  -2.65504   GCGCTAGCAAAAACC             CGAGTCG ATGG CGAACCG              ATACTGCTCAAAGGC  42 59
HER31_RS13605 NONE
HER31_RS13600 NONE
         crp 2971834 .. 2971847 -  -8.1  -5.64274   GTAGGCACAAAAAAA               GCACC CTAA GGTGC                TTTTTTGTTATGCGG 100 48
        rplU NONE
        rpmA 2960543 .. 2960558 - -11.8   -5.1615   GTAATACGCAAAAAA              CCCCGC CGAG GCGGGG               CTTTTCTTATTCGAA 100 50
        cgtA 2959271 .. 2959290 - -16.4  -5.26316   TGATGGTATAAAAAA            GGGCGCCC CTAA GGGCGCCC             TACTTTCGCAAAATT 100 62
        folA 2958701 .. 2958724 - -12.4   -3.6715   GCAGTCAATCCCAAA          CGGCCCAGCT CGAT AGCTGGGCTG           TTTGCTATTCGACAC  95 30
HER31_RS13495 NONE
HER31_RS13490 NONE
        djlA NONE
HER31_RS13480 2946677 .. 2946696 - -13.6    -5.252   TACTTCCAGAAAAAA            GGCGCGAT AGTT ATCGCGCC             ATGGTAATTCACTTG 100 67
HER31_RS13475 NONE
HER31_RS13470 2943461 .. 2943480 -  -9.3   -5.4505   GCCGCCAACAAAAAA            GGAGACG TTTTAC CGTCTCC             TTTTTTATGGCTGTG 100 174
HER31_RS13455 2937229 .. 2937254 - -12.6  -3.34344   GTATTTTTTAATTAA         TGGGGCACGA AATTAG CCGTGCCCCA          GTTTATTATTAACTA  90 38
HER31_RS13440 2929634 .. 2929651 -  -4.1  -3.15544   CGCCACTTTCATTAA             GCTGATT CCTT ATTCAGC              CACGAATTCAGGGCC  48 4
HER31_RS13435 2928835 .. 2928857 -  -5.7  -3.61517   AGCGCCCCGCAACAA          GAGT-TAAGC AGCC GCTTACACTC           TTACTTTGAGGATGG  59 412
HER31_RS13425 NONE
        tcdA 2925877 .. 2925899 - -14.2   -4.8048   TGTGGATACCAAAAA           CGGAGCACTC AAT AAGTGCTCCG           TTTTGTTAACCGCCT 100 54
HER31_RS13405 2921397 .. 2921421 - -18.7  -3.03554   TTAATGAAGCAGAGA          TTGCGGTAGCG TAG CGCTACCGCAA          TAAAGCTTATTCTGC 100 32
HER31_RS13395 2919206 .. 2919221 -  -7.6  -5.10461   TTGAGCGAACAAAAA              GGTGAT ATAA ATCACC               TCAGTGAAGATCATA  86 425
HER31_RS13390 2917828 .. 2917847 -  -9.2  -4.53648   GATAGAAAACATAAA            GCCGGACC AGCA AGCCCGGC             TTCTATAAAGGGTAC  88 48
HER31_RS13385 2916391 .. 2916405 - -11.4  -5.76633   TCAGATACAAAAAAA               CCAGCC GAT GGCTGG               TTTTTTTAGTTCTAA 100 54
HER31_RS13375 NONE
HER31_RS13370 2912230 .. 2912242 -  -6.3  -3.18912   TGACTTAGCTATTAA                TGTTC GAG GAACA                AGTAATTCTGCCAGC  57 9
HER31_RS13365 2911808 .. 2911837 - -18.1  -3.29626   GAAGATTCACAGCAA       CAAAAAAGGGCTC AAAC GAGCCCTTTTTTG        ATCTTACTTTATAGA 100 49
HER31_RS13355 2908857 .. 2908879 - -12.2  -4.25566   AACAACGAGCCAAAA           TCATTAAGTC AAA GACTTAATGA           TTTCAGACAATCTGT  95 72
HER31_RS13350 2905691 .. 2905711 -  -6.1  -3.38291   TCTACAATCTCACAA            GCTCTGCGA TAT CCGCAAAAC            CACTTGGGTGTTGTA  59 28
         rrf NONE
HER31_RS13340 2905372 .. 2905392 - -16.9  -5.42514   TCAGAAACGAAAAAA            GCCCTGTCC AAA GGACAGGGC            TTATTCGAAATAATG 100 39
        dnaB NONE
         alr NONE
HER31_RS13325 2901159 .. 2901173 -  -8.6  -3.25652   TTTATTTAATTAACA               TGCTTG CAA CAAGCA               AATGTGCAGCGTGTT  67 439
HER31_RS13320 NONE
        oppB NONE
        oppC NONE
        oppD NONE
        oppF 2895560 .. 2895583 - -18.2  -4.97158   CGACATCAAACAAAA          CAGGGCGCCT AACT AGGCGCCCTG           TTTCTTTATTACGAT 100 48
HER31_RS13295 2894857 .. 2894872 -  -7.6  -2.59742   TGGAAGGCGTAGAAC              TGCAGT CTCA ACTGCA               TTACGCACGAGATCT  55 193
        dusA 2889659 .. 2889695 - -15.5   -4.1196   AAGGTAGTTTTAAAA    TAGTGAAACTCACTA GCGGATG TAGTGAGTTTCACTA    TTGGGGATTTAAAGC 100 46
HER31_RS13270 NONE
HER31_RS13265 NONE
HER31_RS13260 2888387 .. 2888397 -  -2.4  -4.42653   ATTGCAGCGACAAAA                 CGCG ATT CTCG                 TTGCCTTTTGTTAAT  60 402
HER31_RS13250 2887490 .. 2887511 -  -2.9   -4.1891   TGGTTTTAATATAAA           CCGCTGAGA AAAA TCTTAGTGG            TGGTGATGGTGATGT  58 19
HER31_RS13245 2886721 .. 2886740 -   -15  -4.43911   AAATTGCAACCAAAA            GAGGCGCC CTAA GGCGCCTC             TTTTTCTCACTGCTA 100 48
HER31_RS13240 2886437 .. 2886458 - -14.5  -4.34402   CCGCGGATACGAAAA           GAGCCAGTC AATC GACTGGCTC            TTTTGCGTTTAGGTG 100 57
HER31_RS13230 NONE
HER31_RS13225 NONE
        cpdA NONE
HER31_RS13215 2882374 .. 2882386 -  -5.5  -2.53263   TTTAGCTTCAAGCTA                GCCCT AAA AAGGC                AAAAGCTTGGGGCAG  49 5
        parE NONE
HER31_RS13205 NONE
        parC 2877000 .. 2877029 -  -9.3  -3.03619   AACGATTCCTTAATA       GACAGCAACCACC TCAA GACAGTTGCTGCC        AAAATTACCTATCAG  68 37
HER31_RS13195 2876240 .. 2876260 -  -4.7  -2.74094   CCTCAGACAAAAACG           GGC-GCTC AGTATA GAGCCGCC            TTGTCAAAGGAGCAA  47 102
HER31_RS13190 NONE
        rraB 2875053 .. 2875069 -  -9.4  -5.24129   GCTGGGTACAAAAAA              GCAGCC ATTAA GGCTGC              TTCTGTTACCGGGTA 100 52
HER31_RS13180 NONE
HER31_RS13175 2874355 .. 2874373 -  -3.8  -3.81259   AGACAATTCAGCAAA             GCCACC CGTTGTT AGTGGC             CACAATCGATAACGA  57 342
HER31_RS13155 2871340 .. 2871359 - -13.6  -5.80364   AGTTCAACAAAAAAA            TGCCCAGC ACTA GCTGGGCA             TTTTTATATCGGTTT 100 43
        tsaD 2865502 .. 2865525 - -16.8  -3.85817   ATTCGTTTGTATAAA          GGTACCGAGC CTAA GCTCGGTACC           AAACGAACTACTGCC 100 33
        folB NONE
        folK NONE
HER31_RS13110 2863101 .. 2863124 - -18.2  -3.27704   AGGGTGTAAACCCAA          CAGGGCAGCC AATT GGCTGCCCTG           TCATTTAAACTCTAA 100 49
HER31_RS13100 2860120 .. 2860132 -  -4.1  -3.27029   CCGCATCAAGTAACA                TCGAC ATT ATCGA                TTCTCCTGCACAAGC  48 19
HER31_RS13095 2859082 .. 2859103 - -17.3  -5.41143   CAGCTTGCAAAAAAA           CGGCCGCAC AGAT GTGCGGCCG            TTTTGGCTTGCACCG 100 47
HER31_RS13070 2851544 .. 2851554 -  -3.2  -2.70932   GTTGGTGCTGAAGGA                 GCGA ATG TCAC                 CAACTATGCCGAAGC  40 310
        glnE 2847331 .. 2847370 - -28.2  -3.10513   ATACGCTAACAGATA  CAGCAAAGAGGGCTAACC GCAA GGTTAGCCCTCTTTGCTG   TTACGCCAATTGATG 100 45
HER31_RS13045 2844712 .. 2844731 -  -4.9   -4.4727   CTAATACCGACAAAA            GGTCTGC TTACTC GCAGGCC             TTTTTGGGGCTGTGT  71 370
        hldE 2842106 .. 2842116 -  -3.2  -2.66316   GCGCTTACCATATCA                 GTCC TGA GAAC                 GAATGGTTTTGATGA  42 12
HER31_RS13030 2841039 .. 2841062 -  -6.7  -3.18264   TCTCCTATCGATTAA          CCCTCAAAC ATCGTA GCTCGAGGG           GAGGGTGTCAAGTTC  59 216
HER31_RS13025 NONE
HER31_RS13020 2840355 .. 2840370 -  -3.2  -3.97947   CGCATGCAGCAGAAA              CTGCAA GGCA TTGCGG               TGTGGATTGACGCGC  56 122
HER31_RS12990 2836399 .. 2836418 -  -7.8  -3.50119   CACCAACTAACAACA            GAGCCTGC TCCG GTAGGCTC             TTACTATTTCTGATA  67 29
HER31_RS12970 2832179 .. 2832206 -   -15  -3.14132   GCGGCGCCCTAGTAA        GTCCGGTTA-GCC ATA GGCGTAACCGGAC        ACCTACAAAAATCCC  95 518
HER31_RS12940 2825040 .. 2825054 -  -2.2  -3.79747   TTATTCATCATTAAA               TAACTT ATT AAATTA               CCAGAACTTATTCAT  51 508
HER31_RS12935 2823492 .. 2823521 - -10.9  -5.06451   CATGAGGCTAAAAAA       CCGACTCATTT TATAGTGT AAATGAGTCGG        CTGGGTAATCACGAT 100 46
HER31_RS12930 2822385 .. 2822395 -  -2.4  -3.76224   GGCTCATCTAGGAAA                 GTGG AAT CCGC                 ATGATTCAATTCATG  50 256
HER31_RS12910 2818676 .. 2818703 -   -15  -5.47431   TTAAGATACAAAAAA        GGCGTAGC-GGTT ACT AACCTGCTACGCC        TTACTGTATATGGTG 100 36
HER31_RS12905 2816535 .. 2816583 - -14.2  -3.87815   GGCGAGGCCCAGAAA TACAG--ATGCCACCGCATAACTC AAC GAGTTGTGCAGTGGCATCACTGTA ATGATTTATAAAAGG 100 413
HER31_RS12900 NONE
HER31_RS12895 2814001 .. 2814024 -  -8.8  -5.45726   CACAGCCTAAAAAAA          GGCCAGCCCA TCAA TGGACTGGCA           TCATTTATCGAACAA 100 45
HER31_RS12890 NONE
HER31_RS12885 2812110 .. 2812121 -  -2.2  -3.53012   GTGGCTCTGGGCAAA                CTCA CTTT CGAG                 CCAACATGCGCCCTT  47 215
HER31_RS12875 NONE
HER31_RS12870 2805752 .. 2805773 - -15.9  -4.19624   CACTTTGAATACAAA           GGCGAAGCC AAGA GGCTTCGCC            TTTTTCATCATGTAA 100 59
HER31_RS12865 NONE
HER31_RS12860 2804874 .. 2804889 -  -6.8  -3.07233   TGATAATCCCCAACA              CGCTCG TACC CAAGCG               TTCCTAAGCAAGGTC  58 145
HER31_RS12825 2795592 .. 2795617 - -17.7  -3.91716   TTACTTTTGAAATAA         CAATGGCAGCC CTTA GGCTGCCATTG          TTGGTTTGGAGCCAT 100 121
HER31_RS12810 2791611 .. 2791632 -  -8.7  -3.46285   TAGGTGAAAGAGCAA           CGCTCTACC GACC GGCAGAGCA            TTCAAATAAATTGAA  71 54
HER31_RS12805 2791184 .. 2791222 - -11.1  -3.04558   AAACCACCAGAGATA  GGGTTGGCTTAGGCGAGT AACA ACTC-CCTAAGCCAGCCT   AGGTGGGAACGAATA  76 55
HER31_RS12790 2787715 .. 2787739 - -18.6  -5.14163   ATCTACCAACAAAAA          CGGCCCGCTC TAAAT GAGCGGGCCG          TTTTCTATGGGCGCA 100 48
HER31_RS12780 2786428 .. 2786449 - -15.9  -5.03994   GCGCAGATACAAAAA           CGCCACCGT AACA ACGGTGGCG            TTTGCCATAACGAAA 100 46
HER31_RS12775 NONE
HER31_RS12770 2784413 .. 2784431 -  -6.6  -3.76775   TCCAATACAGTTAAA             GCACTGGC TAG GCGAGCGC             CGACACAAGGGGTTA  66 230
HER31_RS12765 NONE
HER31_RS12760 NONE
HER31_RS12755 NONE
HER31_RS12750 NONE
HER31_RS12745 2778954 .. 2778971 - -12.7  -3.37344   TGGGGATGCAACTAA             CGGACGC TGCG GCGTCCG              TTTTTGATCCTTGCT  90 261
        pepB 2771057 .. 2771088 - -17.4  -4.43879   AGCATTGAATCAAAA      CAACAACGCCACCC CAAT GGGTGGCGTTGTTT       ATTCCCGCGACTGCA 100 52
        hrpB NONE
        mrcB 2765086 .. 2765104 -  -7.4  -3.45031   GCGCTAAAAACGTAA             TAGCCGCA TTA TGCCGCTA             TCCCCCTAGTTGTTA  65 96
HER31_RS12675 2764740 .. 2764758 -  -8.1  -4.09243   CACAGCCCCCCAAAA             GCGCACC TTAAG AGTGCGC             ATTTAGAACCATCTT  74 46
HER31_RS12670 2763366 .. 2763388 - -14.9  -4.35044   TTACCGAAACACAAA           GGCCAACCC TAATT GGGTTGGCC           CACGAAGTGCAGCGT 100 147
HER31_RS12660 2762248 .. 2762274 -  -3.8  -3.57263   ATGGCGATGGGTAAA         TTCAACAACC TGCTGGT AGTTGCTGAA         GGGGTTGAAACCATA  52 169
HER31_RS12640 NONE
        pepP 2757076 .. 2757101 - -17.7  -5.44119   CGCAGCCTAAAAAAA         GCGAAACCGCA TCGC TGCGGTTTCGC          TTCTAACAACACTAA 100 52
        ubiH NONE
HER31_RS12625 2754040 .. 2754057 -  -3.3  -2.62263   ATGCGGCCTAGATCA             CATCGCA CTTT TGCGGCG              CATTATACCTATCGC  42 75
        gcvT NONE
        gcvH 2752443 .. 2752458 -  -7.5  -4.04318   TTGATATACGACAAA              GCCCC TCTGTG GGGGC               TTTCATCTGTGGGGT  72 46
        gcvP 2749404 .. 2749422 - -13.2  -5.14163   AGCCACCAATAAAAA             GAGACCCT GCT AGGGTCTC             TTTTTAGCTAGCAGT 100 74
HER31_RS12605 2747166 .. 2747187 - -10.1   -5.4505   CGTTGCAACAAAAAA           GCGAGCACC TTAG GGCACTCGC            TTTTATGATTATTTC 100 122
HER31_RS12595 NONE
HER31_RS12590 NONE
HER31_RS12585 2742852 .. 2742886 - -15.3  -5.12916   TACAAAACAAGAAAA    GGGGAAAGACAGTAAT AATA ATT-CTGTCTTTCCCC     TAATTATGATTAGTT 100 35
HER31_RS12580 2741664 .. 2741679 - -10.4  -5.30155   CCATTAACGAAAAAA              TCCGGC TTAC GCCGGA               TTTTATTATGGTGGA 100 63
HER31_RS12555 2734529 .. 2734560 - -12.4  -2.87344   GATTTTGGCGAGATA      CGGCGTTGGTTAGCG CAG CACT-ACCAACACCG      TTTATATAACCAAGC  76 114
HER31_RS12540 2731075 .. 2731095 - -16.9  -4.42081   AATACAAACCTAAAA            GGCCAGCAC ACT GTGCTGGCC            TCGTTATTGCGCTCG 100 46
HER31_RS12525 2729607 .. 2729632 - -15.5  -3.57263   AGCGCCAGTTTTAAA         GGCCAGTCAGA GCAA TCCGACTGGCC          TTTTTGTTTGGTCGT 100 466
HER31_RS12490 2723219 .. 2723236 -  -9.8  -2.72568   GGCAACACCAAACAT             CGCGCC GCTATT GGCGCG              GGTTGCCGTTATAGA  69 15
HER31_RS12475 2720304 .. 2720315 -    -3  -3.68222   CTGCAACGGCAATAA                TTAC CCAA GTAA                 CTGCACCAGCGGCAG  52 181
HER31_RS12460 2716555 .. 2716579 -    -5  -2.86413   AAACTGCAAATATTA          CTCACCTAGC TTGGC ACTAGGTCAG          CTAAAGCACTTTTAA  50 48
HER31_RS12455 2716150 .. 2716160 -  -5.4  -3.60792   CTTTCAATTGCTAAA                 GGTT AAT AACC                 TAACGGTGTTAGACC  59 34
HER31_RS12450 2715133 .. 2715143 -  -4.6  -4.55016   AGAAAAAATTGAAAA                 GGGC ATG ACCC                 GGCATCAGCAAAACA  68 209
HER31_RS12430 2710251 .. 2710272 - -15.9   -4.4522   CAAAACGATAACAAA           CAGGGACGC CTAA GCGTCCCTG            TTTCATTGCTGCCAC 100 68
HER31_RS12415 2707485 .. 2707501 - -13.7  -5.36364   TTAAAAAGACAAAAA              GCGCTGC AGC GCAGCGC              TTAAGTCTACCGGTT 100 54
HER31_RS12410 2705599 .. 2705620 - -14.5  -4.10744   CCACGGAAACAACAA           CGGCGTACT AAAG AGTACGCCG            TTTTTTATTACGCTC 100 82
HER31_RS12400 2702092 .. 2702111 - -13.6  -5.76949   CAGCGCCAAAAAAAA            CGGAGCCT TAAC AGGCTCCG             TTTTACAGAGTGATG 100 54
HER31_RS12395 2700609 .. 2700622 -  -3.7   -2.5664   GAGCTAATGAGCAAT               GTCGC CTGC GCGTC                TTTAATGGCGCCGTT  43 278
HER31_RS12385 2698626 .. 2698642 - -13.7  -5.86061   TGCCATCAAAAAAAA              GCCGCTC AAT GAGCGGC              TTTTTTAGGCTGTGT 100 269
HER31_RS12365 2691590 .. 2691616 - -15.9  -5.39721   TCAGGAGATAAAAAA         TCGGCGCAACC TTATG GGCTGCGCCGA         TCTCTATTTCAGCTG 100 79
HER31_RS12350 2689643 .. 2689675 - -19.3  -2.94194   CATAAATTGCAGACA      CAAAAAAGCCCGCAC ACT GTGCGGGCTCTTTCG      TAAAATATGGCAGGG 100 33
HER31_RS12325 2683295 .. 2683312 -  -9.1   -3.5525   ACATATTCCCCTAAA             CGCACCG AAAT CGGTGCA              GCCGAAAGCTTAAGA  73 74
        phsA NONE
HER31_RS12315 NONE
        nrfD 2679027 .. 2679048 - -11.5  -5.39905   ACCAAACAACAAAAA           GCCAGCGGC TTAT GCGGCTGGC            TTTAACTGTTGCTGC 100 71
HER31_RS12305 2678529 .. 2678561 - -19.3  -2.94194   CACAAATCGCAGACA      CAAAAAAGCCCGCAC ACT GTGCGGGCTCTTTCG      TAAAATATGGCAGGG 100 33
HER31_RS12300 NONE
HER31_RS12295 NONE
HER31_RS12290 2675150 .. 2675178 - -16.1   -2.7419   AGATTATTTGAATTA        CTCCCCTAGCATC AAT GATGTTAGGGGAG        TACCTATCTGGATTT 100 39
HER31_RS12245 NONE
        rimI 2666869 .. 2666898 - -20.9  -3.64822   AGGTTTCGAGCTAAA       CAACAAACCCGCC AATA GGCGGGTTTGTTG        TTTCATAAACTTGAA 100 227
HER31_RS12165 2652101 .. 2652117 -  -9.3  -3.70469   AAGGAGAATTCCAAA              GGGGGCG AAG CTCCCCC              CTGAACTGCACCGGT  75 80
HER31_RS12160 2651547 .. 2651569 -  -7.7  -2.52635   AGCGGCATTATTAAC           GCCGCTG TTAAGGCTC CAGCGGC           ACCACCTGATCAAAC  59 10
HER31_RS12150 2650401 .. 2650418 - -11.3  -4.87133   ATTCGCCAAACAAAA             CGCACTC ATTT GAGTGCG              TTTTTTGCATCTTTA 100 113
HER31_RS12140 2647278 .. 2647292 -  -2.8  -3.37493   GGGCTAACAGATTAA               CCTCAT TCA ATTAGG               GCGGTTAGTTATATC  46 69
HER31_RS12135 2645999 .. 2646013 -  -2.1  -4.10161   GATGAGTCCTTAAAA               CACAA AGCGG CTGTG               CAAAGTTAGTAGGGA  55 5
HER31_RS12130 2644148 .. 2644173 -  -3.3  -3.28712   GTGTTTTTTTCATAA         CAAGTACT-CCG TTG CGGTACCACTTG         GTACCGCAAACTCTT  48 54
HER31_RS12125 2642646 .. 2642676 - -14.1  -3.71848   TGCCGCTAGCAACAA       CAAGCCACCATGC TTTAC GCATCGTGGCTTG       ATTTGGATTACCGTT 100 55
HER31_RS12120 2641139 .. 2641156 -  -9.8  -4.76802   TCGAAAAATAAGAAA             GCCCGC TCAGTT GCGGGC              CTTTAATCTAACTAA  91 48
        nrdR NONE
        ribD NONE
HER31_RS12105 NONE
        ribB 2637589 .. 2637601 -  -7.7  -4.25104   CGGCGCCGATTAAAA                CCAAC CTC GTTGG                CATGACCAAAACCCG  76 129
        ribE 2636951 .. 2636964 -  -5.2  -2.72558   ACAACTCTCCAATCA               GGCC TTAGTC GGCC                AGCTGGTTTAGGACA  49 16
        nusB 2636442 .. 2636475 -  -5.9  -2.62642   ACCAGTACTCATAAC     GTCAGACGGCCACAT CGTA ATGTGGCCGTACTCC      TTGTCGTCACTACGT  50 66
        thiL NONE
HER31_RS12080 2634966 .. 2634983 - -11.3  -5.05505   ACTAGAAAGCAAAAA             GCCTGAC CGAA GTCAGGC              TTTTTAGATCAAGTT 100 45
HER31_RS12065 2632545 .. 2632568 -  -4.6  -2.53263   TGTACTTTTAATCGA          CATTATTGCT CTCC AGCAGCAATG           GGCTAACACCACTTA  46 49
HER31_RS12060 2631973 .. 2631994 -  -2.9  -3.12909   CAAATATATAAAGCA           GTGCTGTGT GCAA ACACAGCTA            AAACCAATGTTATTA  43 96
HER31_RS12055 NONE
HER31_RS12050 NONE
HER31_RS12045 2630359 .. 2630372 -  -3.1  -2.80245   CCACGCTAACATAAT               GCTAT CTCA ACAGC                GGGACTAAGTAAGAC  43 13
HER31_RS12040 2629287 .. 2629311 - -15.8  -3.52204   GCAGCGCTAAACGAA          CAACGCCCAC GTAAT GTGGGCGTTG          TAGTATTTACCGCTG 100 83
HER31_RS12015 2623791 .. 2623826 - -11.9  -4.58395   CCTACGCCTTAAAAA    GCACAAAGCCCGCTC TGGTGG GAGCGGGCTTTGTTA     TATTTGGATGATAAA 100 187
        thrA NONE
        thrB NONE
        thrC 2619006 .. 2619037 - -13.1  -3.85909   TCAGTTAAAGCCAAA      GCACGCAGAAAAG TATGAT CTCTCCTGCGTGC       TCAATCCAATAGCGA 100 71
HER31_RS11990 2616352 .. 2616366 -  -7.1  -2.57564   TTATGTGCTTATAAC               GCCTC GTTAA GAGGC               AAATAATATGTTGGC  57 99
HER31_RS11985 2615771 .. 2615787 -  -5.1  -3.45031   CCCCTAAAAACCTAA              CGCCT TGCTAAG AGGCG              CAAAATTGTTGGCTA  56 106
HER31_RS11980 2614673 .. 2614691 -  -9.5  -2.87132   CGGCCGCGCGACACA             GCCGGCA TCAAC CGCCGGC             ATGCAGTATGCGGTC  70 112
HER31_RS11975 2614322 .. 2614335 -  -3.8  -3.77303   TATTGAAACACATAA               CGCT CCACTC AGCG                GGAGCAACTTGGCTG  55 102
HER31_RS11970 2613798 .. 2613808 -  -6.8  -3.29043   AATGGTTGGCTATAA                 TCGC GTA GCGA                 TGGCCAACTGTTTTT  61 59
HER31_RS11965 NONE
HER31_RS11960 2612381 .. 2612397 -  -2.9  -3.81488   CTCCGTGAAATATAA              CGCCC CATTAAC GGGCA              AAAATAGTGGGCTAA  52 101
HER31_RS11955 2611802 .. 2611843 -  -7.9  -2.79183   CTTAGCGGGAGCAGA CTGCCCGGCTATACTTCGCG AGG CACGA-GCGCAACCGGGCTG GCTGAAATCCGCCTA  60 51
HER31_RS11950 2611169 .. 2611185 -  -4.4  -4.26903   TGCATTGGATTAAAA              CCTGCT AAGTA AGCAGA              TAAAGACAGGCAGCT  64 273
HER31_RS11945 2610450 .. 2610474 -  -2.2  -4.21933   TTAACGGGAAAATAA         TATGCCAGCTA AAAT TAGC-GACACA          ACAATAAAAGCCAAC  57 68
HER31_RS11940 2609996 .. 2610007 -  -5.8  -3.18321   AGCGATAATTCAATA                GCCT AAGT AGGC                 AACACAGAAGCACTG  54 47
HER31_RS11935 2609334 .. 2609350 - -10.1  -2.65532   ACGATTGCAAAGGGA              GGGGCAA AGC TCGCCCC              TAATGCATACAAGAA  70 164
HER31_RS11930 NONE
HER31_RS11925 NONE
HER31_RS11920 NONE
HER31_RS11915 2606760 .. 2606770 -  -6.8  -3.14132   CTTTTGTCGCACCAA                 CCCA CGT TGGG                 CACCTTAAGCTAAAA  59 135
         ung 2604653 .. 2604663 -  -5.4  -2.73364   GCCTGATCTCAACCA                 CAAC CGT GTTG                 ATCAGCATCAAAGTT  50 33
HER31_RS11900 2603990 .. 2604013 - -16.8   -5.9218   TAGATAACAAAAAAA          CGCCAGTCAG AAAC CTGACTGGCG           TTTTGCTATTGGGTC 100 77
HER31_RS11870 NONE
HER31_RS11865 2598670 .. 2598681 -  -7.2  -3.61715   CAGCGCCCTGAACAA                CGGC CTTG GCCG                 TGTCGATGCGATGGT  64 173
        yfbR 2593208 .. 2593228 -  -2.6  -2.52529   CATAATGAGCAATAG            GCTTTTTT AATCG ATAAAAGC            GTTTATCTCATAAAA  40 88
HER31_RS11830 2592225 .. 2592246 -  -3.7  -3.53366   CACAGCCAACTACAA           CATAGAGTCC ATC GG-CCCCATG           CGCTTAAAAGGCAAG  52 66
        rppH NONE
        ptsP NONE
HER31_RS11805 2586242 .. 2586259 - -11.3  -5.85244   AACCAAAACAAAAAA             GAGAGCC AATT GGCTCTC              TTTTTTTTATTGCAG 100 56
        nhaA 2582503 .. 2582515 -  -4.8  -3.57106   GTTAACTCAAACTAA                CCGT TAGTT ACGG                TCGGCTTAGCGAAAC  57 9
        nhaR NONE
HER31_RS11780 NONE
HER31_RS11775 2579855 .. 2579874 -  -2.8  -4.30231   AATAACCAACATAAA            GCCCC-AGC ATA GCTTGAAGC            AACGGTTGCAAGGCG  60 134
        rpoE NONE
HER31_RS11760 NONE
HER31_RS11755 NONE
HER31_RS11750 2575125 .. 2575136 -  -4.4  -4.01158   AATCCCAGTAAATAA                TGGT TCTG ACCA                 TCCGTGTTCGAAGCG  61 129
        lepA 2573262 .. 2573274 -  -3.3   -4.5477   TAAGATATGAGAAAA                CAGGG TAG CCATG                AATTAGCTGTCTCCG  64 28
        lepB NONE
         rnc NONE
HER31_RS11730 NONE
        recO NONE
        pdxJ NONE
HER31_RS11715 2568906 .. 2568933 - -10.6  -5.04385   CACAGCCTCAAAAAA        GCCTCCATCGTT ACCC ATCGATGGAAGC         TTTTTCAGTTATGGC 100 71
HER31_RS11700 2563802 .. 2563821 -    -7  -2.54896   TTGTGACGCAACGGA            GGGGCCGC CGTA ACGGCCCA             ACATTTCAATTAGTG  55 50
HER31_RS11695 NONE
HER31_RS11690 NONE
HER31_RS11685 NONE
HER31_RS11680 2560307 .. 2560341 -  -2.1  -3.06183   GTTACTCCTAGTGAA     TCTGCTCGGCG AAAAGTCGAATAA CGCCGAGCTAA     ATTTGAATTAAATTT  42 33
HER31_RS11675 2559485 .. 2559495 -  -5.4   -4.7153   AAATAACTCGAAAAA                 TTCC ATA GGAA                 ACTACTTCTATTTTA  74 51
HER31_RS11670 2558532 .. 2558549 - -14.1  -4.26076   CGACGGTTACCAAAA             GGGCCGC AAGT GCGGCCC              TTGGTAGATAACCTA 100 52
HER31_RS11665 2557704 .. 2557734 -   -17  -4.21462   ATTGACCACTTAAAA       CAAAACCGCAGCTC TGA GAGCTGCGGTTTTT       CGTTGCTTCGCTGCG 100 57
HER31_RS11610 2546856 .. 2546877 - -14.5  -5.06816   ATTTTCCAACAAAAA           GCGCCACAT AATT ATGTGGCGC            TAAATATTTACAATA 100 98
HER31_RS11605 NONE
HER31_RS11600 2544013 .. 2544036 - -15.4   -4.4084   AAGCAGATACCAAAA          TGGCCACCTA GAGT TAGGTGGCCA           TTGTTAGCGAGGCAA 100 49
HER31_RS11595 2543239 .. 2543260 - -17.3    -4.053   ATTATCCGATACAAA           CAGGGCGCC TAAC GGCGCCCTG            TTTCATTATTGTAAA 100 62
HER31_RS11585 NONE
        napA NONE
HER31_RS11575 2538242 .. 2538260 -   -16  -5.65177   ACAGCCATAAAAAAA             CCGACGGC ATA GCCGTCGG             TTTCGATTAGAACGA 100 69
        purU NONE
        rfaH NONE
         epd NONE
HER31_RS11540 2531474 .. 2531485 -  -7.2  -3.14463   AATTTTCGGTAGCAA                CGGG TTTC CCCG                 TCGCTCTTTATGGCA  62 57
HER31_RS11535 2530327 .. 2530344 -  -9.1  -5.81412   TTCAGGCAAAAAAAA             CGCCCAC CGAA GTGAGCG              TTGTAACATCCAGTG 100 47
HER31_RS11530 2529457 .. 2529470 -  -9.5  -5.79526   ACAGCCTAAAAAAAA               CCGCC AAAT GGCGG                TTTTTTTTATGGTTA 100 47
        brnQ 2523280 .. 2523300 - -15.4  -5.29782   CACAGGCATAAAAAA            GCCCGGCC ATTGA GGCCGGGC            TGATTAACACCATTG 100 48
HER31_RS11505 2521514 .. 2521542 -   -11  -3.24747   GTCTCAGATTACGAA        CCTGCACGTCAT AAACG AGGACGCGCAGG        CTTCATATCCTGCTG  78 56
        xerD 2514700 .. 2514713 -  -6.7  -2.90075   TGGTGGTTAAGTAGA               CCTGA ATAT TCAGG                AAAAAGTTACTGGAA  56 55
        dsbC 2513897 .. 2513916 -   -15  -5.28176   GGCAGCTACAAAAAA            GGCACCGC TAAT GCGGTGCC             TTTTGAACTGCAAAG 100 47
HER31_RS11440 2505091 .. 2505103 -  -2.7  -2.73771   CGACTACACATATGA                TTCAC ATA ATGAA                TGTGTTGATTTAATC  41 41
HER31_RS11435 2503988 .. 2504007 - -13.6  -4.70772   ATAGACTCAATAAAA            TGGCGAGC CATA GCTCGCCA             TTGAAGTAGAAAGTT 100 86
        recJ 2502217 .. 2502229 -  -7.7  -3.44051   GCTGGAGCATTATAA                CCGTT GAT AACGG                CAAACTCCTCAGGGC  67 41
        prfB 2499061 .. 2499078 -  -4.1  -3.30007   AATAGTTCCTTACAA             GCCAG ATTTAAGG CTGGC              TTCAATAAATCGGTC  50 2
        lysS 2497436 .. 2497453 -  -8.4  -5.83822   CACAGCCAAAAAAAA             CCGAGC ACTGAG GCTCGG              TTAGTCGTAACACTT 100 111
HER31_RS11410 2496790 .. 2496808 - -10.3  -3.14132   CCTGCTCGTTACCAA             TCCCAGC TTCGC GCTGGGA             TTTTTGTTTATGGTT  74 179
HER31_RS11400 2494511 .. 2494522 -  -2.2  -4.57516   ATATTGAAAGCAAAA                CCAC CGCT ATGG                 TTGAAGCAGCGATGA  61 44
HER31_RS11395 2492952 .. 2492973 - -14.5  -4.50661   AAGCTATAACGAAAA           CAACCTCGC CAGT GCGAGGTTG            TTGAACAGCAGGTGT 100 47
HER31_RS11390 2492023 .. 2492044 - -11.6  -4.09276   CAATAAATACAACAA           TGGCGTGC TTAAGG GCACGCCA            TTTTTTAACTCAGCC  91 58
        metA 2488128 .. 2488146 - -10.2   -3.6284   AAGGAGGATTCCAAA             GGGGGCGA AGC TCCCCCCC             TAATGCATACAACAA  78 341
HER31_RS11365 2486459 .. 2486480 - -17.3  -5.17786   CAAGAAAACGAAAAA           CCGCCAGCG ACAA CGCTGGCGG            TTACAATCAATTTAG 100 37
HER31_RS11360 2484934 .. 2484954 -  -3.3  -3.22475   GCCACCGTGACAACA            GATTACTTC AAC GAAATAGTC            AGGTTCTGACCTGCG  46 7
HER31_RS11355 NONE
HER31_RS11350 NONE
        mmsB NONE
HER31_RS11340 2480887 .. 2480904 - -12.7  -5.36441   GCCTGACACAAAAAA             CCGACGC CAAG GCGTCGG              TTTTTTTATTGTGCG 100 51
HER31_RS11330 2478247 .. 2478272 - -13.3  -3.61894   AAGCCGCTCTAACAA         TACGGGGACTC AATC GAGTCCCCGTT          TTTAATGGCAATGCC 100 109
HER31_RS11320 2475069 .. 2475094 -   -12  -5.58179   TATTACAAGAAAAAA         GGCGATCTTT ATCCCA AAAGATCGCC          TTTGTGTAATTTGAT 100 56
HER31_RS11315 2472889 .. 2472924 - -13.3   -4.7497   CGCATTCAGCAAAAA    CAACAACGCCGCAGG GATTTA CCTGCGGCGTTGTAT     TCAAACCAGTTTGCT 100 40
        proB NONE
HER31_RS11305 2470336 .. 2470367 - -21.8  -3.96932   ACAGATAGCCACAAA      CAACAACGGCAACC CTAA GGTTGCCGTTGTTG       TTTATCTTACTGGGA 100 41
HER31_RS11300 2469450 .. 2469468 -  -4.4  -3.76775   GCTAATACAGTTAAA             GCACCGGC TAG GCGAGCGC             CGATACAAGGGGTTA  58 106
HER31_RS11285 2466911 .. 2466928 - -11.3  -5.45726   CACAGCCTAAAAAAA             CGAGAGC ATCT GCTCTCG              TTTTTTGTATCTATC 100 44
HER31_RS11270 2463210 .. 2463234 -  -8.5  -2.60212   TGATCACCTCACAAC          CGGATTGGGGC AGT GTCCAAATCCG          CTATAGCGGCAAGCA  58 268
         syd 2461449 .. 2461461 -  -5.5  -3.06492   TCAGGTATCGCAAGA                GCAGT ACG ACCGC                ATCATGTCGTATATG  51 490
HER31_RS11240 2458618 .. 2458633 - -11.8  -3.13919   CCCAAAGCCTAAAAG              CGGGCC TCTT GGCCCG               TTATCAAGGTGAATC  83 44
HER31_RS11235 2457365 .. 2457390 - -14.7  -4.83615   GATTGCCCATAAAAA         CGGGCCGCAAC TTTC GTTGCGGCCCT          GTAGCGCTTGTTAAG 100 520
        truC 2453280 .. 2453315 -    -9  -3.38812   TCCGGTGCAATAATA    CTCGGCCCATTAACTA TCAG TTGTTAGTGGGCGGAG     GTATTCCATCAAGTA  71 286
HER31_RS11215 2452740 .. 2452755 -  -6.2  -3.38812   CTCGGTGGAACAACA              GAGTTT TCAT AAACTC               AATTTTCTTTCAAAT  59 24
HER31_RS11210 2451157 .. 2451181 -    -5  -2.69207   CATATGAGCAAACAT          GCATCTGCAT TCAAC ATGAAGACGC          GCACCTCAGCATAAC  48 178
HER31_RS11205 2449283 .. 2449304 - -15.9  -5.14985   TCAAAGACACAAAAA           TGGCGAGCC AATC GGCTCGCCA            TTTTTTATGCTCTAT 100 62
        rpsB 2443921 .. 2443940 - -12.8  -5.08824   TCTTGATTCAAAAAA            CAGGGGCC CTAG GGCCCCCG             CTTAACCAATAAAAA 100 78
         tsf 2442965 .. 2442986 - -12.3  -4.07562   CAAATGGTATAGAAA           GACCGCAGT AAAT ACCGCGGTC            TCAGTATCTCAAAGT 100 49
        pyrH NONE
         frr 2441508 .. 2441534 - -15.2  -4.28488   ACGTAAATACACAAA         CGCCGTGTAGTA TAC TCCTACACGGCG         TTTTTTCTAATCAAC 100 54
        uppS 2440658 .. 2440674 -    -3  -3.06815   AGTGCCGTCAATACA             CG-TTGC TTAA GCAAACG              AACCTCGATTGTAAT  43 70
HER31_RS11160 NONE
        ispC NONE
        rseP NONE
        bamA NONE
HER31_RS11140 NONE
        lpxD 2433157 .. 2433167 -  -2.4  -3.89055   ATAGACTCGGACAAA                 GCGG ATA CCTC                 AACTGGTTTTACTTT  53 34
        fabZ NONE
        lpxA NONE
        lpxB NONE
        rnhB NONE
        dnaE 2426669 .. 2426681 -  -5.5  -4.18018   TCGTCGTATCTAAAA                GGTCA CCA CGACC                TGCTGTTGGCCAAGC  67 7
        accA NONE
        tilS 2424329 .. 2424346 -  -5.5  -3.33696   GCTGCCTTCAACTAA             GGTCACT CGTG AGTGCCC              CTACGGTAACCAATC  56 26
HER31_RS11095 2420744 .. 2420756 -  -4.8  -3.28924   CACTTGGGGCGACAA                GACG CCTAC CGTC                AGAAAGTTCAGTTAC  50 98
HER31_RS11080 2416191 .. 2416201 -  -2.4   -3.2614   TATTTTCGATATTAA                 GCCC TAC GTGC                 CCTACTCCGACGCAG  44 468
HER31_RS11050 NONE
HER31_RS11045 2408200 .. 2408215 -  -7.6  -2.92192   CGGCATTCAACCATA              GCAAAC AGCT GTTTGC               CTTGAAGATAACGCC  59 65
HER31_RS11035 2406243 .. 2406265 - -19.2  -6.00086   AGAGTATAAAAAAAA           CCGACGGTGG CGA CCACCGTCGG           TTTAGATATTTGTCG 100 64
HER31_RS11030 2405496 .. 2405525 - -12.3  -4.37092   ATGGCCCCTACAAAA       TATAAAGCAACGC TGAG GCGTTGCTTTATC        AGAGCACTAACATGG 100 129
HER31_RS11025 2403090 .. 2403113 - -13.2  -5.90981   TGATACCAAAAAAAA          CGGTAGAGCC TCTC GACTCTACCG           TTCTATCGGCCGCTA 100 79
HER31_RS11020 NONE
        fliD NONE
HER31_RS11010 NONE
        fliS 2399562 .. 2399583 -  -2.9  -3.81575   CTCAAAAAAGTAGAA           CAACGCCCA AATA TTGACGCTG            AACAAAAAAAACGAA  52 102
HER31_RS11000 2397929 .. 2397946 - -11.3  -5.39721   CCACGATACAAAAAA             GCAACGC CTAG GCGTTGC              TTTTGGGGTTTAAGC 100 52
HER31_RS10995 NONE
HER31_RS10990 2395382 .. 2395395 -  -2.4  -3.63744   TCCTTGTCGAAAATA               TGAC GCCTTG GTCA                CTTGTTTCTTTTAAT  49 86
        fliE NONE
        fliF NONE
        fliG NONE
HER31_RS10970 NONE
        fliI NONE
        fliJ 2389218 .. 2389237 -    -5  -2.64888   AATGCAGCGAAATAG            CTATCGAG TTGG CTCAACAG             ATCGGTTGAGTCGGC  48 354
HER31_RS10950 NONE
        fliM NONE
        fliN NONE
        fliO 2385549 .. 2385564 -  -3.2  -2.50113   CAGCACCGCAGTAAC              CGCGAT GAGC ATTGCG               ATAGGCACGTCAGCT  42 35
        fliP NONE
        fliQ NONE
        fliR NONE
        flhB 2382581 .. 2382591 -  -3.2  -2.69151   GTCTGTTATATATCA                 GCAA CGC CTGC                 GCAAATATTATGCAG  42 62
        flhA 2380395 .. 2380410 -    -9  -2.72144   TTATCTCTCCGAAAC              TAGGCC TATT GGCCTA               CCGATTGGACGATCT  66 15
        flhF NONE
HER31_RS10900 NONE
HER31_RS10895 2377334 .. 2377355 -  -5.1  -3.10843   TAAAATTGTGAAAAG           TCAGTACAC CGCA GTGCGCTGA            TAGTTAAATGGCTGG  51 29
        cheY NONE
HER31_RS10885 2376163 .. 2376173 -  -3.2  -4.18494   GAGCGCCATTGAAAA                 CTCC CTA GAAG                 CCTAAGCTAGACAAA  60 19
HER31_RS10880 2373835 .. 2373853 -  -6.6  -2.52543   ATCCTTGTTAACTTA             CGCTTAGC GTC GCCGAGCG             TAATGTTTCAACATG  54 10
HER31_RS10875 NONE
HER31_RS10870 NONE
HER31_RS10865 NONE
HER31_RS10860 NONE
HER31_RS10855 NONE
HER31_RS10850 2369749 .. 2369769 -    -9  -5.24416   GAAGCAGAACAAAAA            GGTAGCAG AAAAA CCGCTACC            TTTTATTACAATATT 100 60
HER31_RS10845 2368515 .. 2368530 -    -6  -3.51232   TTGCCGCTAAATTAA              CGGTCG GACT CGTCCG               CCCCTACGGGTTAAT  60 36
HER31_RS10840 2366509 .. 2366524 - -10.4  -5.37593   CCCCAAACGAAAAAA              CCACCG CATG CGGTGG               TTTTTCATTACTGAG 100 49
        cobO 2360210 .. 2360220 -    -4  -3.94933   TGAATTGGAAAAAGA                 GAAT ATG ATTC                 TTAAGGCTGAGGTTG  57 252
HER31_RS10810 2353105 .. 2353119 -  -2.8  -3.78934   GTGCCCCGACAAGAA               CAACCG GCC CAGTTA               ATATGCGGCCATGGT  52 463
HER31_RS10805 2351743 .. 2351760 -  -2.7  -2.55378   AAGTATACGATTAAC             TGCAACA TTAT TTTTGCA              AGCCAACTGCTTAAT  40 289
HER31_RS10800 NONE
HER31_RS10795 NONE
        neuC 2348824 .. 2348836 -  -4.9  -4.12254   TATTATTATAAATAA                GATTA AAG TAATC                AGACTAAATAAACCT  63 39
        wecB NONE
        wecC 2344357 .. 2344376 -  -5.7  -3.01791   ATTTTTTGGGCAAGA            GCCATGC ACTTAA GCATGAC             TCTTATAATATAAAA  52 145
HER31_RS10775 2342620 .. 2342635 -  -2.6  -2.82586   TAGATCACAACATTA              CATCTT TAAC AAAATG               GTTTGCATTTTAAGA  41 7
HER31_RS10770 NONE
         alr 2340092 .. 2340104 -  -2.7   -3.7108   ACCTTTAGATGTAAA                TATCA TAT CGATA                CCAAGTATAACCTAA  50 80
HER31_RS10760 NONE
HER31_RS10755 NONE
HER31_RS10750 NONE
HER31_RS10745 2336229 .. 2336255 -  -3.6  -3.78234   ACGCAAAGCCAATAA         TGGGCGACCACC ATC GATGGTCACTTA         GCCTCTACTTTTAAC  53 95
HER31_RS10715 2329320 .. 2329340 -  -2.6  -3.05597   TTTACTTGTGAAAAC           CGAGCGTTA ACCA TAAC-CCCG            AGAAGCGGTTGCTAT  43 130
HER31_RS10710 2327641 .. 2327654 -  -3.1  -2.73364   GCTTCAGCGTAAGCA               CAAAC CTAC GCTTG                TTACCGCAGTACACG  43 50
        galE 2326348 .. 2326369 -  -3.8  -3.04144   CCGCGATCTTCAACA           TGTG-AACG ATACA CGTTACACA           AGCTGAATTCTCGTT  47 225
HER31_RS10700 2325311 .. 2325346 - -20.6  -3.47573   CGAGCTACAGCACAA    TCAACAAGGCCCCATC CTAG GATGGGGCCTTGTTGT     ATCTAGCGGATAATA 100 65
        ltaE 2323691 .. 2323703 - -10.5  -3.60475   AAGGCGGATTCTAAA                GGGGG CGC CCCCC                CTAATGCATACAAGA  78 162
HER31_RS10690 2322792 .. 2322809 -  -3.4  -3.51708   CACGCGGTAAACTAA             CGCTGA TTTAAG TCAGCA              ACACGCTAATTAGGA  50 35
HER31_RS10685 NONE
HER31_RS10680 2321412 .. 2321430 -  -5.2  -3.94188   ATTTAGGCGAAATAA             CACCCTGT CCC ACAGGCCG             CCTCTTGGTAGAGTT  61 39
        rpoS 2320215 .. 2320234 - -12.2  -5.04175   CCAATGAGATAAAAA            GAGAGCTG AATT CAGCTCTC             TTTTTATAGCCACCA 100 46
HER31_RS10635 2311415 .. 2311431 -  -8.1  -3.50047   GTGATAAACCTAGAA              CAAAATG GAA CATTTTG              ATGTAGTTCACATTG  67 327
HER31_RS10630 2310390 .. 2310409 -  -2.8  -3.76775   TCTAATACAGTTAAA            GC-ACTGGC TAG GCGAGTCGC            GATACAAAGGGTAAA  52 242
HER31_RS10615 NONE
HER31_RS10610 2306544 .. 2306584 -  -2.4  -4.36914   TCTGGTGGTACAAAA CGAGAGTCGCTTAGC-CAG CTAT CTGCGCCGAGCGCCACTGG  AGATCTACTTACCGT  60 393
HER31_RS10600 NONE
HER31_RS10595 2302342 .. 2302360 -  -6.1  -2.55351   TTCTGTTATATGAAT             CGATTAA CTCAC TTAATCG             TTAGCTAAACTGGCC  53 26
HER31_RS10590 2300823 .. 2300862 - -27.4  -4.77438   AGCCATCATCAAAAA  TCGCGCCGTTGAGCGAGT TGTT ACTCACTCAACGGCGCGA   TTAGTTATGGCTGTG 100 330
HER31_RS10585 2299513 .. 2299540 -   -15  -4.86385   ATCCGCAAAAACAAA        CAGACCGATTAG CGCG CTAACCGGTCTG         CATTTGATTACGGAA 100 64
HER31_RS10580 2298779 .. 2298791 -  -5.5  -3.53343   AACTCGGCCTTTAAA                GGCGA TTA TCACC                AACGGAGCAGGCTAT  57 8
HER31_RS10560 2295046 .. 2295064 -  -2.4  -4.57569   GTAGTCTTTGAAAAA             TAGCGC CGCTGAC ACGCTA             AAACTTCCGTTCAGC  61 197
HER31_RS10550 2293601 .. 2293631 - -18.4  -3.30441   CAGTATCTCCGATAA       CTGTCAACGGCAGC GTT ACCGCCGTTGACAG       AAGAGCGAGCTCGAG 100 157
HER31_RS10530 2287397 .. 2287419 - -13.5  -5.24799   CGATAAACACAAAAA           GCGGCAAGT TAAGC ACTTGCCGC           TTTTTAGGCTGTAAT 100 96
HER31_RS10520 2285229 .. 2285269 - -12.1  -2.81223   CTTAATAAGATAGTA  TTGCTTAATCACCTCAGTA ACT CACTGAGGTGATTAATAAA  ACGGCTATTGCAACG  79 76
HER31_RS10490 2276599 .. 2276624 -  -2.7   -4.0371   TATCTGTTATATAAA         CAGTAATTA GGTTGTGT TAATTACCG          TTAATGTCAAAAAAT  56 95
HER31_RS10485 2275060 .. 2275083 -  -4.6  -3.53018   TTCAGACACGAAATA          CGTATC-GGTT ACT AACCTGCTACG          CCTTACCGTATATGT  54 144
HER31_RS10475 2271489 .. 2271512 -  -6.6  -3.42503   GGCTAATACTGATAA          CCCGCCTCCA CGAA TGGCGACAGG           CTAAAGCTGTTGATC  60 117
HER31_RS10455 2267494 .. 2267527 - -12.7  -2.70704   AGCGGTCAAAGTAAT     CTATGCATTATTCTT ACTT ACGAATAATGCATAG      TATATGTTCTAATAG  82 67
HER31_RS10450 2266194 .. 2266210 -  -8.7  -2.72954   CAACAGGATAGAGCA              TCCGCCT CCT AAGCGGA              CGATTGGGGTTCGAG  62 474
HER31_RS10435 NONE
HER31_RS10430 2263711 .. 2263742 -   -16  -4.07568   TTTCTCCGCCGAAAA      CCAAAACGGCTCTA TTGC TAGCGCCGTTTTGG       TTACAAGCTAAGACA 100 72
HER31_RS10410 NONE
HER31_RS10405 2259858 .. 2259877 -   -15  -4.82678   CCATAAAAAGCAAAA            GGCGTGCC ATTT GGCACGCC             TTGGGTTTATCGTTA 100 46
        flgB NONE
        flgC NONE
HER31_RS10390 NONE
        flgE 2256853 .. 2256879 - -13.8  -4.49556   TGGGGAGGAAACAAA         TTGCCGCCCA ACGATTG TGGGCGGCAA         CTAAAGTGGAAGGTG 100 53
HER31_RS10380 NONE
        flgG NONE
        flgH 2254487 .. 2254502 -  -7.5  -3.30007   AATATCTCCTTAGAA              CGGCC ATAGCG GGCCG               GAGAAGAACTGCGTC  63 4
HER31_RS10365 NONE
        flgJ NONE
        flgK NONE
        flgL 2249203 .. 2249226 - -15.4  -5.89921   ACTATAACAAAAAAA          GCCCAAAGTG ACTG CACTTTGGGC           GATTCTTATTCGCTT 100 55
        dbpA 2247610 .. 2247629 - -12.2  -3.75153   GCTCGGCAATCCAAA            GGAAGGAC ATTT GTCCTTCC             TTTTTTAGTTGGTAC  93 142
        rssA 2240081 .. 2240124 -  -6.2  -4.92385   CACAGCCAAATAAAA TCGCTTCATAAAAATGGG TTGTTGTT CTCATTTATATGAAACGA ATGTTGGCGGTGCAA  81 226
HER31_RS10300 2235488 .. 2235506 - -10.2  -3.36175   AAGGGGGATTCATAA             GGGGGCGA CGC TCCCCCCC             TAATGCATACAATAA  76 158
HER31_RS10290 NONE
HER31_RS10285 2233507 .. 2233531 - -15.8  -3.14647   ATTCAGCAGATGTAA          CAAAGCCCGC GTAAT GCGGGCTTTG          GAACTAGGCATCAGA 100 42
        fadI NONE
        fadJ 2220533 .. 2220556 -   -11  -4.16837   GATAACCATAAAGAA          TCCGAACCCC TAGT GAGGCTCGGA           TCTGTTATTGCAGCG  88 365
        sixA 2212427 .. 2212452 - -11.9  -5.13722   CGTATTAAAACAAAA         GGTGCCAGCAT GGCT ATGCCAGCACC          CTGATGTTTTAGCCT 100 106
        prmB NONE
        aroC NONE
HER31_RS10195 2208651 .. 2208664 -  -2.3  -2.72511   CCTAGCCGTTTAAAT               CAGCC TGCA GGCTT                CGATTGGCAGTGGCG  40 11
HER31_RS10190 NONE
HER31_RS10185 2207167 .. 2207185 -   -16  -2.78712   GCTTCAATTGAATGA             CCTCCGGC AGC GCCGGAGG             TTTTGCTACAAGCGG 100 51
        norR 2196202 .. 2196215 -  -2.3  -4.08763   ACAACAAACACTAAA               GCAGC AACA GTTGC                CATGGGAGCGTGCCA  55 348
HER31_RS10095 2185628 .. 2185642 -    -5   -2.8619   GCAAAAGCGAGCAGA               GTCACA CTT TATGAC               AATTGAATGTCATTT  50 321
HER31_RS10090 2184413 .. 2184432 - -13.6     -6.13   ACAGCCAAAAAAAAA            CCACTGCC CTAA GGCAGTGG             TTTAGATGTCTAGCT 100 51
HER31_RS10085 2182847 .. 2182868 -  -8.8  -6.11644   TTACGCAAAAAAAAA           GCCTAATC CATGAC GATTAGGC            TTTAAATGCACAAAA 100 54
HER31_RS10080 2179695 .. 2179714 - -13.6  -5.14563   CCTCTCATTAAAAAA            GGCCAGTC GAGT GACTGGCC             TTGTTAGTAATATTA 100 43
HER31_RS10075 2179058 .. 2179073 -  -6.2  -3.80094   CCTAAACCAATACAA              TTTAGC CTTA GCTAAA               TAAAACCTAAGATAT  64 358
HER31_RS10070 NONE
HER31_RS10065 NONE
HER31_RS10060 NONE
HER31_RS10055 NONE
HER31_RS10050 NONE
HER31_RS10045 2173393 .. 2173421 - -16.1  -3.79874   TGGTACACAACATAA        TAAAAAGCCCCGC AGT GCGGGGCTTTTTG        GTACTGAGATAACTT 100 39
HER31_RS10040 2171237 .. 2171270 - -16.1  -4.07568   TGGTTGCTGCCAAAA     CATCACCCTCAGCCC GTGC GGATTGAGGGTGATG      CCGACATACAATTGA 100 68
HER31_RS10035 2170316 .. 2170327 -  -3.6  -3.41878   TGCCCGAATGGATAA                CAGC TTTG GCCG                 CTACGTTTGGCGTAC  50 480
        fabB 2167306 .. 2167334 - -11.1  -2.54371   AAGCAGTGTAACCGA       TGCAGGCTCGGG GTGCAG CCCGAGCCTG-A        TGGAGAAGGTGTTAA  74 44
HER31_RS10020 NONE
HER31_RS10015 2165091 .. 2165105 - -12.8  -3.77806   TTCCACAGTAAAACA               GGGGGC AGA GCCCCC               CTGTTAATTCCTTTT 100 59
HER31_RS10010 2163469 .. 2163489 - -16.9   -4.5287   CCAAACCAACGAAAA            CGGCGACCT TTA AGGTCGCCG            TTAGAATTACTTAGC 100 51
        truA 2162547 .. 2162559 -  -3.3   -4.4078   GGCTTCTAACGAAAA                CTGGT CGT ACCCG                CCGTTTTGCACAGGT  62 62
HER31_RS10000 NONE
        folC NONE
HER31_RS09990 2159623 .. 2159638 - -10.4  -5.07486   CACCCCTAATAAAAA              GCTCGC AAAT GCGAGC               TTAAAGTTGAAGCGG  93 26
HER31_RS09985 2159052 .. 2159068 - -12.3  -4.10188   TATAGGTATAAATAA              GGCAGGT TAA ACCTGCC              TTGTGATGAAACTGG 100 15
        purF 2157413 .. 2157438 - -16.2  -5.56673   AGTGACAACAAAAAA         CCGCCGCGAA TTGTCG TTCGCGGCGG          TTGCGGTAGCTCTAC 100 63
HER31_RS09970 2155271 .. 2155283 -  -5.5  -3.36878   CGCAGTTACTCATAA                GGCCA CTC TAGCC                CACCGCTAAGTTTCA  56 31
HER31_RS09955 2152338 .. 2152361 - -16.8   -4.2008   ACACAGCCTAATAAA          GAGGCCAGTC AATT GACTGGCCTC           TTTGGTTCGAGCTTT 100 63
HER31_RS09945 NONE
HER31_RS09940 NONE
HER31_RS09935 2150644 .. 2150661 - -11.3   -5.1287   TTTAGATGTAAAAAA             GCCGCTA TAAA TAGCGGC              TTTTTTGAATGATGG 100 38
         tig 2148832 .. 2148863 - -13.9  -4.63932   TATTCCCTAACAAAA      TGGCTCGTATG-GG ACGAG CCTCATACGAGCCA      TTATATGATTGGCCG 100 68
        clpP NONE
        clpX 2146772 .. 2146787 - -10.4  -5.56673   AGGCATAACAAAAAA              GGAGCC GATT GGCTCC               TTTTGCAAAACAGAT 100 85
         lon 2144241 .. 2144274 -  -7.5   -5.7946   TTTTCAACAAAAAAA     GCCAAAAATGCGCCT GAAA AGGCGCATTTTTTAA      AGAAAATTAGCAATT 100 47
        hupB 2143626 .. 2143645 -  -7.1  -5.15969   TTGTAACGCAAAAAA            GCGCACC AATACG GATGCGC             TTTTATCTATCTTAC  86 114
HER31_RS09905 2141676 .. 2141693 - -12.7  -5.65177   ACAGCCATAAAAAAA             GCCACCG CATG CGGTGGC              TTTTTTGTCGCAGCT 100 49
HER31_RS09895 2139940 .. 2139969 -  -5.7  -3.18383   AGCTGGATGTACCAA       TGGCACCGG-ATCC ACA AGACACCGACGCCA       TCGAGATTGTCGCAA  55 360
        yciH NONE
HER31_RS09880 NONE
        ruvX 2138109 .. 2138134 - -13.3   -4.4078   CCCGCCCAATCAAAA         GTGCCGAGGCA TCGC TGCTTCGGCAC          TTTTTGTTGAGCTAA 100 73
HER31_RS09860 2132025 .. 2132047 - -15.6  -3.57971   ACACCTAGGTGCAAA           CGGCTCCCAA TAA TCGGGAGCCG           TTAATTTAGTTGAAA 100 58
HER31_RS09830 2127487 .. 2127500 -  -2.3  -3.70139   TAAGCCGAACAAATA               GAGCC AATA GGCTG                ATTCGAAAGCATAAT  49 142
HER31_RS09825 2126544 .. 2126563 -  -3.6  -2.73429   TGAAGAGAACAACAG            TTAGTGGT GTTT ACCATTAA             TTATGAGGTTGTATT  43 22
        htpG 2123964 .. 2123983 - -12.1  -4.55295   GCTCTGATAAACAAA            GCCCCGC ACGGTG GCGGGGC             TAAAAAGGCTGAATT 100 39
HER31_RS09815 2123046 .. 2123069 -  -7.5  -3.19026   GACCGTAATAGTGAA          GACCAAAGC CATCAC ACTTTGGTC           ATAGATCCATCAATT  62 50
         adk 2122287 .. 2122302 -  -8.2  -5.72254   TCAAATAACAAAAAA              GCCCGC CGAA GCGAGC               TTTTGATTTCAACCA 100 56
        hemH 2121177 .. 2121195 - -10.3  -4.88407   GCAGGCAAGCAAAAA             CGCCACT GAAAT AGTGGCG             TTTTAATTAAGAGCA  93 58
HER31_RS09800 2119528 .. 2119555 -   -20  -3.84639   GAACAGTGACAATAA        GAGATGCCACCG GCTG CGGTGGCATCTC         ACAGACAAACTCTGC 100 43
HER31_RS09795 NONE
HER31_RS09790 2115984 .. 2116013 - -16.5  -3.24017   AATGTCATAACGCAA       CAACGCCACCGCA AAAA TGAGGTGGCGTTG        TAAATCAACATTGGT 100 55
HER31_RS09785 2113720 .. 2113757 - -18.7  -3.74077   TGTGACACAGCCAAA   CCAAAACACCCAGTACA GCAA TGTACTGGGTGTTTTGT    TATGTCAAATTTAGC 100 65
HER31_RS09775 2111711 .. 2111721 -  -2.6  -5.09521   CTAATAAAGTAAAAA                 TTTT CAA AAAA                 ATGATTAAGTTAACG  73 401
HER31_RS09750 2105220 .. 2105235 - -11.8   -5.4251   TGCAGACACAAAAAA              GCCGCC TAAC GGCGGC               TTCTGTAGAGAAGGC 100 54
HER31_RS09745 NONE
HER31_RS09740 NONE
HER31_RS09735 2101786 .. 2101807 -   -13  -5.27923   TAATGCGACAAAAAA           GCCCGAGG TGGCGG CCTCGGGC            TTGCTTCGCTTTAGA 100 52
HER31_RS09720 2096873 .. 2096886 -  -8.1  -3.04517   ATTGTCCCCTAAAAG               CACCG AAAT CGGTG                AAGCTGAAGGCTTAA  62 188
         hcp 2094356 .. 2094373 - -11.3  -3.44622   TACTCTCACAAGTAA             GGGGATC TTGC GATCCCC              TATTTCAACAGACTA  85 75
HER31_RS09710 2093025 .. 2093052 - -18.6  -5.24129   TCGTGTTACAAAAAA        GGCCAACGACAT AATA ATGTCGTTGGCC         TTTTTATTGGCTGTG 100 336
        rbsD NONE
        rbsA NONE
        rbsC NONE
        rbsB 2079959 .. 2079979 - -12.5  -3.85817   ATGGCGCCTCACAAA            TAGGGCCGC AAC GCGGCCCTT            AAAATGGATTTACTT 100 35
        rbsK NONE
HER31_RS09645 2077952 .. 2078000 -  -2.5  -4.19927   AAAAGTAGAGAGAAA GTAGCATTTTCACCGCTTTAG ACAAGTG CTAAAGCGGCAAAATTGACAT AGAACTGCAGTTCTT  58 43
        yeiP 2077303 .. 2077320 - -10.5  -5.58209   CCAAAGCCAAAAAAA             GGCGACC GATT GGCCGCC              TAGGTCGATTCAAAC 100 46
        tadA 2071884 .. 2071901 -  -6.3  -3.25223   TACTTAGATTACTAA             GTCGATG TTGT CATCAAC              ACGTCAACGATGAAT  57 230
        purL 2066112 .. 2066127 - -10.4  -6.09133   CAGCCCAAAAAAAAA              CACCGC CGCA GCGGTG               TTTTTAGTAAAGCAG 100 49
HER31_RS09590 2062475 .. 2062491 -  -8.7  -3.38812   TTGGCGCCAACAACA              GCAGCTA TTT CAGCTGC              CCTACCAAGCGGATG  69 334
HER31_RS09565 2057651 .. 2057663 -  -6.3  -2.59191   GCAGAGTTTCATAAT                CAAAC ATG GTTTG                GCGTCTCCTTGGCAG  53 12
        cydB NONE
        cydX 2056342 .. 2056361 - -12.2  -5.80817   GCCAAGACAAAAAAA            CGCACAAC CAAA GTTGTGCG             TTTTAGGATGTAATC 100 53
HER31_RS09540 NONE
HER31_RS09535 2049892 .. 2049926 -   -13  -3.30159   TTAACGTTGTTAGAA     TACGAAACAACCGACC TCT GGTCGGTTTTTTTGTA     TCCGGAATTTATCAC  95 189
        hemA 2037729 .. 2037753 - -11.4   -4.9792   TACCTTAGATAAAAA          GGAACGGCCC ATATA GGGCCGTTCA          TTACTTAATTCGGAA 100 51
        prfA 2036618 .. 2036630 -  -3.3  -3.00298   TGCGCTAACCAGAGA                TCGAG GCG CACGA                TTAATCTTCTGCCAG  45 26
        prmC 2035785 .. 2035796 -  -4.4  -3.63341   AACAGGGTTCAATAA                CTCT AACG AGAG                 ACTAGCACTGCCACT  55 27
HER31_RS09415 2035305 .. 2035324 -  -9.3    -4.208   CTCCAAAAGCAGAAA            CTGGCAC ATCGAG GTGCCAG             CATTAATTGTAATTA  82 50
HER31_RS09410 NONE
        kdsA 2032764 .. 2032790 - -22.4  -5.18355   TTCAAAAAGCAAAAA         GGCCACCCTAGC AGT GCTAGGGTGGCC         TTGGGCTTCTTATCT 100 390
HER31_RS09385 NONE
HER31_RS09380 2027067 .. 2027079 -  -4.1   -3.7282   GGACTGCAGCAACAA                CTAGC TGG GCTAA                CGAAAACTTGCGAAA  55 99
HER31_RS09325 2016540 .. 2016559 -   -10  -4.99134   AGGTTAAAGCAAAAA            GCACCGTC CGAA GACAGTGC             TTTTGTTTAACTGCG  93 52
HER31_RS09320 2015991 .. 2016013 - -14.2  -5.08169   ACACAGCCCAAAAAA           GCCAGTCAAC TAA GCTGACTGGC           TTTGGGAGGAATTGG 100 75
HER31_RS09300 NONE
HER31_RS09295 2011206 .. 2011216 -  -2.4  -3.75024   TTGGACCATGAATAA                 GGCC TTT GGCG                 TGGTGCACCGTGAAC  50 397
HER31_RS09285 2009729 .. 2009739 -  -8.2  -2.83403   TGCCGGTTACGAAAG                 CCGC GTG GCGG                 TGGGTACGGTAATCT  59 239
HER31_RS09265 2004252 .. 2004262 -  -2.4  -2.89565   AATGCGACATAACGA                 CGGC CAA GCAG                 TATCAGTCGGCATTG  41 28
HER31_RS09260 NONE
HER31_RS09255 NONE
        rlmM 2002126 .. 2002147 -  -9.4  -5.14626   ATGACCAAAACAAAA           CGCCCCAC GGTTAG GTGAGGCG            TTAAAGTAATTATCG  93 51
HER31_RS09245 2001514 .. 2001540 - -12.4  -3.84712   TAAGCGTATATCAAA         GCGAACTCTCAA CCG CTGAGAATTCGC         TTCGAAAAGCTCTTC 100 43
HER31_RS09240 2000942 .. 2000952 -  -2.6   -3.4158   TCCAAAAATCATTAA                 TTTA AGC TAAA                 AACTCGACCCCGGCT  46 21
HER31_RS09225 1995575 .. 1995598 - -10.3  -2.97667   CCACCGATGAAACTA          CACCGTTGC TGTTTC GCAACGGCG           TCTTAAGTAGCTGGG  70 102
        sstT 1993783 .. 1993801 - -11.7  -5.36441   GGGCGATATAAAAAA             GCCCGCT GTTAT AGCGGGC             TTTCTCTGCAAACTC 100 59
HER31_RS09200 NONE
HER31_RS09195 1989505 .. 1989525 - -18.3  -5.10877   ATAATAAACGAAAAA            GCGGCAGCC TAT GGCTGCCGC            TTAGTGTCTTAACTA 100 56
HER31_RS09190 1988199 .. 1988212 -  -2.4  -2.71712   TTGTTCTTTCCAAAG               CAGT TAAAGC ACTG                GCTTGGTGAGTCGCG  40 425
HER31_RS09155 1979113 .. 1979136 - -11.8  -3.55323   AAAAAGCTGACACAA          CAAAGGGAGC CGAA GCTCCCTTTA           TATTAAATCACTCGG  88 53
        phoB 1978225 .. 1978247 -  -6.2  -3.11291   TCTACAACTTGAAGA           CCAGCCGAAA CAC TTACAGCCGG           CTAGAGAAGCGATAA  56 16
        phoR NONE
        pstS 1975356 .. 1975394 -  -4.7  -2.52464   CGTGGCGGCAATGGA  GCG-GTTGCACCATGTTGA TAC CCAACACGGTG-AACTCGT  CGCCAAAACAGCACA  44 502
HER31_RS09125 NONE
        pstA NONE
        pstB NONE
        phoU 1966431 .. 1966444 -  -2.3   -4.3208   GGCGATAACCCAAAA               GCTAC TGGC GTTGC                ATCAATCGACTATTG  60 217
HER31_RS09080 NONE
HER31_RS09075 1958037 .. 1958060 -  -4.6  -5.81412   TTTAGGCAAAAAAAA          GGACCAAC GAAGGGGT ATTGGTCC           AAAAGCATGTCACAA 100 111
        queA 1955722 .. 1955746 -  -8.5  -3.16039   AAGGATGGGGATCAA          CCACCGCGACT TCA AGCCACGGCAG          CAGATATAATGTGGT  67 65
         tgt NONE
        yajC NONE
        secD NONE
        secF 1951265 .. 1951282 - -12.7  -4.84527   TCCAGATAGCAAAAA             GCCACCC CTGA GGGTGGC              TTTTTAATCTATTTA 100 47
HER31_RS09035 NONE
HER31_RS09030 1949787 .. 1949824 -  -2.1  -3.75933   ATAGACCCCATTAAA   GTTTCAACAATATACCC TTGT GAGTACACTATTAAAGC    CTAAGCCGAGCCAAA  51 125
HER31_RS09025 1949084 .. 1949103 - -13.6   -4.8622   TCTTCGAACGAAAAA            TGGCGACC CTCG GGTCGCCA             TTTTTTTTGGCTGTG 100 331
HER31_RS09000 1943891 .. 1943901 -  -2.4  -3.46936   AAAGCTGATTAAATA                 CGCC GAA GCCG                 GAATTCTGGTTTTGA  46 381
        trmJ 1940644 .. 1940670 -  -2.3  -3.80133   TACGCGCACAAAACA        GCCACTAGTCAC GATT GCGATTAGT-GC         TATCGACTCGCTCTA  51 3
        iscR NONE
HER31_RS08970 1938616 .. 1938634 - -12.4  -3.25942   ATCCTGGGACATTAA             GCCGACCC CAT AGGTCGGC             TTATCAAATTCAATT  86 39
        iscU NONE
        iscA NONE
        hscB NONE
        hscA NONE
         fdx NONE
        iscX 1934847 .. 1934862 - -10.4  -5.08169   ACACAGCCTAAAAAA              GGCACC CGTA GGTGCC               TTCTTACATCAATCT  93 34
HER31_RS08935 NONE
         ndk 1932973 .. 1932989 - -10.8  -4.87328   CATAGAAACAGAAAA              GGCGCC TCATG GGCGCC              TTAAATGTCTACAAA  95 47
   trmG/rlmN NONE
        pilW NONE
HER31_RS08910 NONE
        ispG 1927755 .. 1927777 -  -7.8  -2.79133   CAAGGGTGGAGCATA           CAACAGCA TTAGTCT TGCTGTTG           TACGTCGATTTGCTG  60 11
        hisS 1926405 .. 1926415 -  -5.4   -3.5394   AAACTTCCCCTTAAA                 TCTG GAC CAGA                 GCGGCTAATTCTTCG  57 10
HER31_RS08895 NONE
        bamB 1924535 .. 1924556 - -13.7  -5.63012   AAAAACAAACAAAAA           CGCCCCCGA ACTT TCGAGGGCG            CCATAGTTTACAGGG 100 44
         der 1922954 .. 1922972 - -14.6  -5.75945   AGTCGCCAAAAAAAA             CGGCCTCT AAA AGAGGCCG             TTTTCTGTTGCAGCA 100 42
HER31_RS08880 1921334 .. 1921356 -  -9.8  -2.79133   TAAGCTGCGATTACA           CCGTGGCAAC CTA GCTGCCAAGG           TAACCTCAACCTCAT  69 50
        guaB 1918419 .. 1918437 - -14.6  -4.58283   TAAGTGTTGTAAAAA             GGGCAGAC TCC GTCTGCCC             TTCATCCCGATTAAC 100 36
        guaA 1916731 .. 1916767 - -26.9  -3.32844   TGCCGCATGCTACAA    CGAAAATCGGCCACAAC ACT GTTGTGGCCGATTTTCG    AAAGTCAAACGGGTT 100 67
HER31_RS08860 1914321 .. 1914350 -   -13  -4.51363   GAGCAAAGAGGAAAA       CAGAAGTCAGAC CTATGC GCCTGACTTCTG        CGCTTACTTAAGTGG 100 46
HER31_RS08855 1911178 .. 1911215 - -14.3  -3.35695   GCGACATAAATTGAA   GATACAAAAAGGGCTCC CGAA GGAGCCCTTTTGTTATC    CATAACACTATCGCT 100 40
HER31_RS08830 1906357 .. 1906377 -  -4.7  -4.51097   TTAACCATCACAAAA            TAGCCCT ACTGTTA AGGGCCA            TTCACTCAAACACTA  69 38
HER31_RS08825 NONE
HER31_RS08820 NONE
HER31_RS08815 1903055 .. 1903071 -  -9.3  -3.86015   GAGTCGGGTTACAAA              GGGGGCG AAG CTCCCCC              CTAATGCATACAAGA  77 176
HER31_RS08800 1900937 .. 1900957 -  -2.5  -4.37886   TCACTGTCTATAAAA            CTGCAAGGA TCT TACTTGCAC            TACATCTGCACTGCT  60 46
HER31_RS08795 1899625 .. 1899640 -  -5.4   -3.5393   ACGAGGTGTTTTAAA              CTCAGC TAAG ACTGAG               TGTTTGCCGATTAAT  57 463
HER31_RS08775 NONE
        rsmS 1897016 .. 1897041 - -12.7  -4.72863   CTAAATAAACCAAAA         GGCAACCAACA CTGG TGTTGATTGCC          TTTTTTCGTTTCATG 100 73
HER31_RS08745 1890315 .. 1890329 -  -2.1  -4.30719   TTTCTCTACAACAAA              TGC-GC TCAT GCTGCA               CTCCTTGATACCAAG  59 193
HER31_RS08740 1889425 .. 1889458 - -13.3  -3.68222   GGGTAAGCCCAACAA     CTGCCCAATAGCGAA AGAG TTTGCTATTGGGCAA      TTATGTAGCTCAAAC 100 111
HER31_RS08735 1887688 .. 1887698 -  -5.4  -3.92659   TCGTTAAAATGTAAA                 TTGC TCC GCAA                 CGACTCCCACAGCCC  63 365
HER31_RS08710 1883741 .. 1883764 - -12.4  -2.67973   ATAGAAGCGATATGA          GTGCCCCCAC GGAT GTGGGCGCAC           TTGAGGCAGGACTAC  81 40
HER31_RS08705 1879713 .. 1879732 -   -15  -5.39755   TATAACCATAAAAAA            GCCCGAGC AAAT GCTCGGGC             TTTTTTTAAGTTTAA 100 124
HER31_RS08700 1876361 .. 1876381 - -13.3  -4.73613   TTATTATCAAGAAAA            GCCCGAGCA ATA TACTCGGGC            TTTTTCGTCAGTTAG 100 61
HER31_RS08695 1873236 .. 1873251 - -10.4  -5.05113   TTCAGATAAACAAAA              GGGAGC CGAA GCTCCC               TCATCATGTTTACTA  93 48
HER31_RS08690 1872006 .. 1872023 -  -6.3  -3.18264   TTCTTTATGTACGAA             GAACGCA ACCT TGCATTC              ACAATCGAATAATCA  57 320
HER31_RS08685 1869039 .. 1869062 -   -14  -5.61913   AAGAAATACAAAAAA          GGCCAAAAGA TTGC TCTTTTGGCC           TTAGGTAACAACAGT 100 46
HER31_RS08680 NONE
        ybaK 1867202 .. 1867212 -  -2.4  -3.87815   CCCCATCTGTACAAA                 CAGC TCA GCAG                 CGGTCTCGATTGGTT  53 451
HER31_RS08650 1860437 .. 1860452 -  -6.2  -2.66912   ATTCAACCGATACCA              TTATCG TTGG CGATAA               CATGAGTACCGATAT  50 185
HER31_RS08620 1851385 .. 1851410 - -20.5  -4.59853   CTAACCGCTTAAAAA         GCCCCGCCAAG GAAA CTTGGCGGGGC          TTTTGTTTGTCTAGC 100 504
         upp 1845857 .. 1845874 - -12.7  -5.06451   TACGATCGTAAAAAA             GGCGTCG AATT CGACGCC              TTAATTGCAGTAGAT 100 44
HER31_RS08595 1844468 .. 1844499 - -11.6  -3.71848   GTTGGCTATTAAGAA      TTCACCCTCAAGCC TAGT GGGTTGAGGGTGAG       GCAGACCATCGAACT  91 85
HER31_RS08585 NONE
         hda NONE
HER31_RS08575 1839496 .. 1839520 -  -3.6   -4.1552   GACGCTTTGAAGAAA         CCACCAGTGAG GAGA CTCAC-AATGG          CATCGGGCTAATAAA  60 120
HER31_RS08570 NONE
HER31_RS08565 NONE
HER31_RS08560 1833746 .. 1833767 - -11.6  -4.82154   AATGGACAGTAAAAA           GGCGCTCT GTGCAA AGAGCGCC            TTGTTGGTGTTTTTG 100 42
HER31_RS08540 1829659 .. 1829697 - -12.7  -4.22748   CACCAATAAATTAAA  TA-ACGAAGGTCGCAAAC ACTG GTTTGAGACCTTCGTCTA   GCCGAGTCAAAATTA 100 46
HER31_RS08515 NONE
HER31_RS08510 1823721 .. 1823741 - -11.9  -4.94972   GATCATAACCAAAAA            CGGAGCTCT AAA AGAGCTCCA            TTTAGCGGGTTAAGT 100 349
HER31_RS08505 1821896 .. 1821920 -  -9.2  -4.78266   AAATAAAACAATAAA          GGCGCTCCCC TTGCT AGGTAGCGCC          TTATTCATTAGAACG  90 51
HER31_RS08490 1819596 .. 1819609 -  -2.4  -2.71712   CTGGTTCCCTTAAAC               TTGC TCAGAC GCAA                CAAGCGCCTTTTGCA  40 6
        bamC 1818422 .. 1818444 -  -9.9  -4.90266   GTTACCAAGCAAAAA          GCCAGCC-CT TAAC AGCGGCTGGC           TTTAGATATGCTGAT  93 79
HER31_RS08480 NONE
HER31_RS08475 1813717 .. 1813738 - -10.9  -4.45117   CAGAGCCTAAATAAA           CGCTGAAAC CGAG GTTCCAGCG            TTATATTTTTTATGT  93 58
HER31_RS08470 NONE
HER31_RS08465 1810856 .. 1810881 -  -2.5  -3.50393   TTTTAGTGTAGATAA         CTAGCAGCAAA ATAG TTAACTGCAAG          CGCCCATTGGTGCCG  48 160
HER31_RS08460 1810315 .. 1810341 - -15.2  -3.83502   TAGCGCCACAGTAAA         GGGCCCTTAAAC ATG GTTTTAGGGCCC         TTTTTAGGCTTTGTA 100 334
HER31_RS08410 1802434 .. 1802457 - -12.4  -4.59511   AAGAGTTGTGAAAAA          GCCACCACTG AATA CAGGGGTGGC           TTTTTTGTTGGGTGC 100 70
        recC NONE
        recB NONE
        recD 1791067 .. 1791090 - -12.5  -3.06312   AAAGTTTTGATTTAA          CCACTGCAC TTGGAT GTGCAGTGG           TTTTTTATTAGCCAT  83 318
HER31_RS08385 NONE
HER31_RS08380 1788637 .. 1788653 -  -7.3  -3.28712   TGCGGCTTTTGACAA              CCAACAG AAG CTATTGG              CCGCCGCACTTTGTT  61 351
HER31_RS08370 NONE
HER31_RS08365 1785919 .. 1785933 -  -7.1  -3.07787   AACAGCAGCCCAATA               CCGAG CTAAC CTCGG               TACCGGAATTAGGCG  56 175
HER31_RS08355 1783675 .. 1783693 -  -8.9  -5.38054   CTGCACAAATAAAAA             TAGGAGC TTAAC GCTCCTA             TTTTTCTATCTGTTA 100 62
HER31_RS08310 1776892 .. 1776921 - -12.9  -3.67175   ATTGGCCAAAACCAA       CAATGGCGCACCG TTTT CAGTGAGCCATTG        TATTAGCCTAGGATG 100 60
HER31_RS08300 NONE
HER31_RS08295 1772832 .. 1772858 - -19.6  -5.30616   TGAGTGAAACAAAAA         GGCGGCATCAAT TCG ATTGATGCCGCC         TTTTTAATGGCTGTG 100 355
         smc 1768458 .. 1768474 -  -5.1  -3.07816   CCTGTAGTTATTTAA              CGCTG GCCATCG CAGCG              GCCTCTTCTATATCC  51 1
        zipA 1767283 .. 1767299 - -10.8  -4.55287   GCTAGTGACACAAAA              GGCCGC AATAA GCGGCC              TTTTGATTGCAATTA  93 52
        ligA 1765180 .. 1765201 - -12.3  -4.96848   CTCGTCATATAAAAA           CGCCTCAGT GGAT ACCGAGGCG            TATATTCTTTTGTGA 100 44
HER31_RS08270 1763777 .. 1763799 -  -6.3  -3.07222   AGGATTATGCCAACA           GGAGTTGCA GCTGT TTCAACTCC           TACTTAATGGGCTAG  53 108
HER31_RS08260 NONE
HER31_RS08255 NONE
HER31_RS08250 1760123 .. 1760140 - -11.3  -5.42198   GCCTAAAAAAGAAAA             CCCAGCA TCAA TGCTGGG              CTTTGGGTTTTAGCT 100 55
HER31_RS08245 1759633 .. 1759650 -  -6.9  -4.14598   GCTAATTAAACCAAA             GGCAACC GCTT GGATGCC              TTATGCCAACCTGAT  70 26
HER31_RS08230 NONE
HER31_RS08225 1745392 .. 1745412 -  -6.1  -2.74371   AACTTGTTAATACTA            CCGTTACCG TAG CGATAACCG            CCCACACTTAAACGC  53 97
HER31_RS08220 1743598 .. 1743608 -  -3.2  -2.83403   CCTTCCCCACTAAAC                 GCTA AAC CAGC                 CAATAAAGTCAGTTT  43 109
HER31_RS08215 1742962 .. 1742973 -  -5.8  -3.18239   GATATACTGCATTAA                CCCT AAAC AGGG                 CTTTAACACGGTTAG  54 53
        gmhB 1733895 .. 1733927 -  -9.1  -3.05384   GCGGTGTCGATTTAA      TGCTCAGCGACTTAC TTG GTAAGTGGCTGTGCC      CCGTCGACAGATGCG  68 154
HER31_RS08165 1732014 .. 1732029 -  -3.2  -2.72649   ATTTCATCAGACAAT              CTGTGT GAAC ACTCAG               CGCAAAACAAGTAAT  43 45
HER31_RS08160 1731870 .. 1731880 -  -5.4  -3.28712   TTTTCCTGGTGACAA                 CTTC AAA GAAG                 TTGGTGGGTCTGAGT  56 27
HER31_RS08155 1731699 .. 1731743 -  -6.1  -5.42259   CTAGGCCTAAAAAAA GCCAAAGGTAAATTG-TTCTA TTATC TAGAAGCAATT-AGCTTTGGC TTCTCATCCCCAAAC  91 54
HER31_RS08150 1728426 .. 1728446 -  -6.1  -3.38291   TCTACAATCTCACAA            GCTCTGCGA TAT CCGCAAAAC            CACTTGGGTGTTGTA  59 28
         rrf NONE
HER31_RS08140 1728107 .. 1728127 - -16.9  -5.42514   CCAGAAACGAAAAAA            GCCCTGTCC AAA GGACAGGGC            TTATTCGAAATAATG 100 39
HER31_RS08100 NONE
HER31_RS08095 NONE
HER31_RS08090 1718039 .. 1718069 - -21.3  -4.20368   GTACTGCAATACAAA       GGGGTCCGAGCTT GGACT AAGCTCGGACCCC       TTATGACGTTACTGA 100 90
HER31_RS08080 NONE
HER31_RS08075 1715326 .. 1715344 - -14.6   -5.7946   TCGCTAACAAAAAAA             GGCCAGCA AAC TGCTGGCC             TTTAACGTTTTATGA 100 60
HER31_RS08060 1711692 .. 1711718 -  -8.8  -2.57781   TAAAGAGCTAAGTCA         CGGTTATCAGCA GAC TACCAATAACCG         CATGGAGCTGCTTGC  61 347
        dnaQ NONE
HER31_RS08045 1709390 .. 1709410 -  -3.9  -3.98282   CGCATATTAAGTAAA            GGTTCCGAC ACC GTCAAACCC            TTTTTCCAACATTCT  57 97
HER31_RS08040 NONE
HER31_RS08035 NONE
HER31_RS08030 1708906 .. 1708924 -  -3.8  -3.15999   GGTTTAGACAGCTAA             CTGAGTTG GGG CGACTCAA             TTCCCTGTTGTTGCC  48 58
HER31_RS08025 1708769 .. 1708795 - -15.3  -5.24003   AACAAAAACGAAAAA         GCCCATAGCTA TCAAC TAGCTATGGGC         TTAAATAAATGGCGG 100 35
HER31_RS08015 1707183 .. 1707195 -  -2.7  -3.85817   AGTGCTTCCCAGAAA                TCGAT AAG ATCAA                CGCCAATCATGGTTA  52 381
HER31_RS08005 NONE
HER31_RS08000 1703311 .. 1703324 -  -3.1  -3.44794   AAGCGATCATTAGAA               TCGAC CCAA ATCGA                AAGAGTTAATCGATA  50 85
HER31_RS07995 1702313 .. 1702343 -  -2.7  -3.12142   TGTATATCTAATAGA      TACAC-AGCATAAT AGCA ACCATGCCCGTGTA       GTCAATAGCTACACA  43 101
HER31_RS07990 NONE
HER31_RS07985 1701157 .. 1701171 -  -2.8  -3.35996   GATCTGTATTTAGAA               GTTGAA CGC TTCGAC               CTTGATACCGCTTTT  47 381
HER31_RS07930 NONE
HER31_RS07925 NONE
        fliE NONE
        fliF NONE
        fliG NONE
HER31_RS07905 NONE
HER31_RS07900 NONE
HER31_RS07895 1683774 .. 1683785 -  -4.4  -3.91911   TCGATCTTAATGAAA                TTGC CACG GCAA                 TGACCGACCAACACG  59 498
        fliD NONE
        fliS NONE
HER31_RS07865 NONE
HER31_RS07860 NONE
HER31_RS07855 NONE
        fliA NONE
        motA NONE
HER31_RS07840 NONE
HER31_RS07835 NONE
HER31_RS07830 1674739 .. 1674752 -  -6.7  -3.73072   AACTCTGCCATCAAA               GCGAT GGTT ATCGC                TGATGCATGGATGGT  64 215
        flgB NONE
        flgC NONE
HER31_RS07810 NONE
        flgE 1671373 .. 1671392 -  -2.8  -3.25823   CGCGGTGTAGATTAA            GCGATCCA TAAT TAGATAGC             GTTCATCAGCGACTG  45 17
        flgF NONE
        flgG NONE
        flgH NONE
HER31_RS07785 NONE
HER31_RS07780 NONE
        flgK NONE
        flgL NONE
HER31_RS07765 1664339 .. 1664352 -  -6.7   -3.7941   TACGGCTGACAACAA               GCAGA TCCC TCTGC                TTCACTGGCGCTATG  66 41
HER31_RS07760 1661512 .. 1661554 -   -10  -2.89742   CTTAATTGGTACACA GCCTAAGAAAGCGGTAAATC AAA AAGTTACCGCTTTCTTAGTG ACTCAAAATTTGGCA  72 406
HER31_RS07740 NONE
HER31_RS07735 1657653 .. 1657670 - -11.3  -4.81249   CCGCAAATGCAAAAA             GCCCATC TATC GATGGGC              TTATTCAGGCTGTGT 100 80
HER31_RS07725 NONE
         add 1653171 .. 1653185 -  -6.4  -3.18274   CCTAGTCGAATCGAA               CTGCTG CAG CAGCAA               TTTGCTACCGCGCTT  53 89
HER31_RS07710 1649964 .. 1649976 -  -7.7  -4.00756   CAGGCCACCAAACAA                CAGTG CCT CACTG                GAGAGTGCATAAACG  71 258
HER31_RS07700 1646705 .. 1646718 -  -2.4  -3.18582   CAGTTTAGCCACCAA               CAAG GGCAAG CTTG                GTGCAGCTACCGCAA  44 376
HER31_RS07685 1643664 .. 1643683 - -13.6  -4.78107   CAGCACTAGCAAAAA            CACCCCGA CGGG TCGGGGTG             TTCTTAATAGATAAT 100 47
        pheS NONE
        pheT NONE
HER31_RS07655 1636339 .. 1636359 - -18.3  -5.98781   GACAACTAAAAAAAA            CGCCGCCCA AGT TGGGCGGCG            TTTTCATTTATTCAC 100 33
HER31_RS07605 NONE
        tsaB NONE
HER31_RS07595 1624541 .. 1624567 - -10.2   -5.5604   TTAACCAACAAAAAA         GAAAACCGACCA CAA TGGTCGGCTTTA         AGCTGGCAACATCTA 100 38
HER31_RS07590 NONE
HER31_RS07585 1622709 .. 1622731 -  -5.7  -3.66874   TTAACTCTACCCAAA          CGCTAACACA TCAC TGT-TTAGCG           TCTAAAAATTTGATA  59 13
        fadD NONE
         rnd 1619810 .. 1619827 -  -9.9  -6.06723   TTTGGCAAAAAAAAA             GAGAAGC CGAG GCTTCTC              TTGTTTTTGAGTCTT 100 45
        fadD 1617682 .. 1617699 - -12.7  -5.12068   CACAGCCAATAAAAA             GGGAGCC TTAT GGCTCCC              TTTGTTGTTGCGGGT 100 281
HER31_RS07550 NONE
HER31_RS07545 1614199 .. 1614217 -  -7.4  -5.06816   ATTTTCCAACAAAAA             GGGTGG ACTAAAG CCACCC             TTTTAGTTGCGATAC  86 46
HER31_RS07540 1613563 .. 1613581 - -12.4  -5.21236   AACCGATAATAAAAA             CGCCGACA TTT CGTCGGCG             TTTTGTTGTTGCTAT 100 40
        fadR 1610108 .. 1610147 -   -13   -3.7732   GTGTTAGAGCAAGAA  CAGGACAACG-GCAAAATC GAT GTTTTAGCACGTTGTCCTG  AACCGGATGAACTTA  85 38
        grxD 1603941 .. 1603956 - -10.4   -5.5112   TTTAGCAACAAAAAA              CGGAGC CTAA GCTCCG               TCTCTTTTGCTGCTA 100 113
HER31_RS07495 1602696 .. 1602716 -  -3.9  -3.53224   TATGCCCTGCGTAAA            GCCGCTAAT AAC AACAGCAGC            AGTAACTAGCCTCCA  52 31
        vanZ 1601282 .. 1601299 - -12.7   -4.7254   AGCTGTTACCAAAAA             CCCGCCA ACAT TGGCGGG              TTTTTTTAACGCCGT 100 367
HER31_RS07440 1593095 .. 1593118 -   -16  -5.15167   CATTAGCAATAAAAA          GCCGCAACGG ATAA CCGTCGCGGC           TTTTTATTAAATATA 100 46
HER31_RS07425 1583703 .. 1583726 -   -11  -3.02043   AAGTTGTTGCTAACA          GGGCGACC TCTACATG GGTCGCCC           TTTTTAATGGTTGTT  76 311
HER31_RS07415 NONE
HER31_RS07410 NONE
HER31_RS07405 1579403 .. 1579416 -  -9.5  -5.52384   GTGCGATCAAAAAAA               CCGGC TAAG GCCGG                TTTTTTGCTATCTGC 100 67
HER31_RS07395 1578082 .. 1578105 -  -2.4  -3.69283   TAAGGCATCTAACAA          CGGT-GCTAAC TAT GGTAACTACCG          GTGTTGTAGCGGATG  49 89
HER31_RS07390 1576925 .. 1576942 - -11.3  -5.05601   GATTAGATACAAAAA             TGCCGTC TTTC GACGGCA              TTGATTGCTTAACAT 100 69
HER31_RS07385 NONE
HER31_RS07380 1575483 .. 1575518 - -14.3  -3.49383   AAAAACGTAATAATA    TTAAGCAGAAACGAT TTCAGC ATCGCTTCTGCTTAA     TTATCCAGCCAAGTT 100 49
HER31_RS07370 1573979 .. 1573996 -  -3.4   -4.7373   GCAGCTCATCAAAAA             GGTCTGC TCCAT GCAG-CC             TTTTCGGTTTTTGTT  66 475
        adhE 1569106 .. 1569122 - -15.1  -3.60475   AAGGGGGATTCCAAA              GGGGGCG AAG CGCCCCC              TAATGCATACAAGAA 100 163
HER31_RS07345 1567729 .. 1567741 -  -6.3  -3.61232   GCCTTTAGACAAACA                GAACA CTC TGTTC                GCATTTTGGACTATA  62 342
        folE 1561546 .. 1561566 - -11.2  -5.52384   TTGGGACTAAAAAAA            CGAGCTCT TACTG AGAGCTCG            TTTCCAACAATTATT 100 66
        hrpA 1557462 .. 1557499 - -13.5   -3.4277   ATGTAACATCGAGAA   TCGCCCGAGCGCCAAATA AAT TACT-GGCGCCAGGGCGA   TACTAGTTGCTAAAG 100 35
HER31_RS07315 1555303 .. 1555321 - -14.6  -4.02334   CACCGATACGACAAA             GCCCACCA TAA TGGTGGGC             TTTTAGTTTCAGCAA 100 66
HER31_RS07310 1553022 .. 1553041 -  -7.8  -2.96745   CACAGCCCAAATAAT            GCCCCAAC ACCA GCTAGGGC             TCATTAACAGTAATC  61 44
HER31_RS07305 1552493 .. 1552533 - -18.6  -3.04398   GTGCCGCCCTAAAAC GACAAAACCCGCGAACTTA TTGC TAAGTTCGCGGGTTC-GTC  TATGTATGGCGGAGG 100 32
HER31_RS07300 NONE
HER31_RS07295 1551638 .. 1551678 - -18.6  -3.04398   TTTTGTCGCTAAAAC GACAAAACCCGCGAACTTA TTGC TAAGTTCGCGGGTTC-GTC  TGCATATGGCGGAGG 100 32
HER31_RS07290 1550175 .. 1550189 -  -2.1  -4.19336   AACCACCGCAATAAA               TAGCA TATAT CGCTA               TTAATTTGGTTACTA  57 95
HER31_RS07285 1549542 .. 1549553 -    -3  -3.07222   ACGATGACCCCAATA                CAAT GAAT ATTG                 AGCAATTAAGGTTAC  43 62
HER31_RS07280 1547554 .. 1547572 -    -6   -5.1356   GCTGATGAAGAAAAA             TGGTACCT ACT ATGTACCA             ACAATCAGCGCTGGT  86 482
HER31_RS07270 NONE
HER31_RS07265 NONE
HER31_RS07260 NONE
HER31_RS07255 NONE
HER31_RS07250 NONE
HER31_RS07245 1541611 .. 1541631 - -18.3  -4.33151   TACTACAACCGAAAA            GGGCGTGCC ATT GGCACGCCC            TTTTGAATCTGCATC 100 55
HER31_RS07235 1539915 .. 1539930 -  -3.2  -3.75169   CACCATCCGACTAAA              GCACAA CGTT TGGTGC               AAAAACGAGCGCAAC  52 115
HER31_RS07210 1537863 .. 1537880 - -14.1  -5.76633   TTACAGATAAAAAAA             CGCCGGC TTAC GCCGGCG              TTTTCGGAAGTTACT 100 128
HER31_RS07195 1534959 .. 1534972 -  -9.5  -5.52384   TGTGCATTAAAAAAA               CCGCC GTAT GGCGG                TTTTTGTTGTTACTC 100 49
         icd 1527958 .. 1528013 - -17.8  -3.57615   CGAACATTTTCTAAA CGACAAAACCCAAAAAAACGCCGACA TCGC TGTCGGCGTTTTTATTGGCTGTGTCA CCGTTAAGTGTTGAA 100 176
        clpS 1527152 .. 1527172 -    -4  -3.51708   TAGTTGCTAAATCAA           GCTG-GCTC TGAC GAACACAGC            AAAGGATGTTGATTC  52 1
        clpA 1524777 .. 1524799 - -12.1  -5.04385   CACAGCCCTAAAAAA           GCCAGTTAC TTATG GTAACTGGC           TTTGTTGATGCGCTT 100 61
        nikR 1519095 .. 1519112 - -12.7  -5.26316   TCATCCCACAAAAAA             GCCCAGC TTAT GCTGGGC              TTTTTTGTGGCTGCG 100 64
HER31_RS07105 1516837 .. 1516847 -  -5.4  -3.66356   ATGGCTAACGGCAAA                 CTCA GTG TGAG                 TTAGCACTACATCGC  59 32
         lrp 1510538 .. 1510553 - -11.8   -5.5604   TGAACTAACAAAAAA              GCGCCC AATT GGGCGC               TTTTTGTATAGGTGG 100 51
HER31_RS07075 NONE
        lolA NONE
HER31_RS07065 NONE
        crcB 1505129 .. 1505149 -    -4   -3.9461   CCCCGCTAATAACAA            CGATAACA AATGG CGCTATCG            CAGTTGAGTGTTGAG  57 426
        serS 1503554 .. 1503577 - -15.4  -5.29782   CACAGCCATAAAAAA          GGGAGAAGCT AACA AGCTTCTCCC           TTCAATTCTGTAACC 100 45
         zwf NONE
         pgl NONE
HER31_RS07030 NONE
HER31_RS07025 1495732 .. 1495749 - -12.7  -4.56802   AAACAAATAGCAAAA             GGCCTGC TATT GCAGGCC              TTTGATTATTGATGT 100 53
HER31_RS07010 1491259 .. 1491269 -  -3.2  -3.75169   GATTACGGTATCAAA                 CCCA TAG TGAG                 AGTCGCACAGCTAAT  53 183
HER31_RS07000 NONE
HER31_RS06995 1485836 .. 1485864 - -10.4  -5.63517   TTTGGAAACAAAAAA        GGCTTCGAATAA ATGAG CCATTCGAAGCC        AAAACCTTTCGGCTG 100 74
HER31_RS06965 1482185 .. 1482207 -  -3.4  -2.90904   TCAGAACGATAAGCA           TCCGTTGTCG ATA CGACAAAAAA           CCATCGTTTTTCAAT  44 361
HER31_RS06945 1478127 .. 1478144 - -11.3    -5.626   TACGGTACAAAAAAA             TCCAGCC TAAC GGCTGGA              TTTTTGAGCTAACAA 100 60
HER31_RS06940 NONE
HER31_RS06935 1477443 .. 1477459 -  -9.4  -5.55769   CCCCACAACAAAAAA              CGGAGC GCTAA GCTCCG              TTTTTTCTATTCCGC 100 32
HER31_RS06920 1472213 .. 1472230 - -10.5  -4.85177   AAACCATAGTAAAAA             GGCCGCC TTTG GGCAGCC              TTGATGCTGAATATA  91 57
HER31_RS06915 1471375 .. 1471404 -  -9.3  -4.40561   CTGGCGCAAAAACAA       TTAGGGCGTGGTA GTGA TAGCGCGCCCTAA        CTTGTTCACATAGCT  85 75
        gyrA 1462181 .. 1462205 - -18.6  -3.58905   ATTCCCTAGATACAA          CACGGGCGCC ATATA GGCGCCCGTG          TTTCAGTTTGACTTA 100 38
        serC NONE
HER31_RS06870 NONE
        aroA 1458522 .. 1458554 -  -7.7  -2.60508   TATCCTCCAAAAAGT      TTTGAGCACTACGTT GTT AACGCAGCGCTCGAT      GAAAATGCGACCGAT  59 103
         cmk 1457708 .. 1457719 -    -3  -2.97171   CAGTTGAGCAAATGA                TTCA GTCA TGAA                 TATTCTTTTAAATTT  42 117
        rpsA 1456008 .. 1456024 -  -2.2  -2.65483   ATAGCCAAAATACAG              TCGCCT ATGGG AGGCTA              TACCTCCCATTTTGC  39 47
        ihfB 1455652 .. 1455690 - -16.2  -2.78609   CAGCTAACAAAAAGG   CATAAAAAAACCCCGCGA AAA TCGCGGGGTTTTTTAACA   ACAAACTTAGGCGTT 100 32
HER31_RS06845 NONE
        lapB NONE
        pyrF 1453170 .. 1453184 - -11.4  -5.65177   ACAGCCATAAAAAAA               GGAGGC CGA GCCTCC               TTTATTTCAACGCAA 100 45
HER31_RS06830 1450962 .. 1450975 -  -2.4  -4.14511   AAGTGGACGTTAAAA               TAGC TCGTTT GCTA                ACTTCATCGTTACGT  55 6
        pssA 1447302 .. 1447315 -  -8.1  -6.23317   ACAAAAACAAAAAAA               GCAGC CTAA GCTGC                CTTTCTGTTACAGGA 100 33
HER31_RS06810 NONE
HER31_RS06805 NONE
HER31_RS06800 NONE
HER31_RS06795 NONE
HER31_RS06790 1440658 .. 1440672 - -11.4  -5.29782   CATAGCCACAAAAAA               GGAGCC TTA GGCTCC               TTTTTTATTGCTATG 100 58
HER31_RS06765 NONE
HER31_RS06760 1434693 .. 1434711 - -11.7   -4.7373   TGAGTTCACTAAAAA             GCCCGCT AGATA AGCGGGC             TTTTTAGTGCTGTGT 100 281
HER31_RS06700 1423412 .. 1423461 -  -9.6  -2.81509   GAAAACAGTGAATTA TTACTTGAGCCAAAGCCCATT GCTCTGTTT AACGG-CTTTGGCTCAAGTAG CTTAGAGTTTGAACT  65 219
HER31_RS06690 1418227 .. 1418243 -  -2.2  -3.73775   TTGAGCTGTACTAAA              TGCTTG GCCTT CAAGCC              GCGTTTCAAATCTGC  51 304
HER31_RS06680 1416871 .. 1416893 -    -2  -2.75992   GTTGATCTAATATGA           TCGTTATAAT GTG ATTAGATCGA           TATTTGCGGTTACTC  40 35
HER31_RS06675 1415401 .. 1415417 -  -5.7  -3.28791   ATTTGTCCGCCACAA              GGCCGCA GGA CGCGGGC              GAGAGCAGGGCGTTC  55 339
HER31_RS06665 1412558 .. 1412583 -  -6.1  -3.93371   CTAAAAAAAAATACA         GATTAGCGTAC AGAT GTACGCTCAAC          AACTCCGATCAGCTG  66 34
        fabA 1411572 .. 1411587 -  -3.2  -4.56775   ACGTCGCTGGAAAAA              TGGCGT GGTA ACGTCA               TGTTGGTGGTTAATA  64 423
HER31_RS06555 NONE
HER31_RS06550 NONE
HER31_RS06545 1378478 .. 1378492 -  -4.2  -3.75332   AGGGCTCAACCGAAA               CCACGT TCT ACGTGT               TTGCGGTCTATTTTG  56 144
        rsmF 1375677 .. 1375705 -  -5.9  -5.83822   CACAGGCAAAAAAAA        GCCCGCAACTATT CCT ATTTGTCGCAGGC        TTAGGGGAACTTAAC 100 228
        metG 1366142 .. 1366160 -   -16  -5.12068   CACAGCCAATAAAAA             CGCCGAGC TAA GCTCGGCG             TTGTTCTGATCAAAT 100 56
HER31_RS06480 1364656 .. 1364668 -  -4.1  -3.23979   TCAACATGAATGGAA                CTGCT CAT AGCAA                GCCCTTATGCCAATG  48 30
HER31_RS06475 NONE
HER31_RS06470 NONE
HER31_RS06465 1362265 .. 1362278 -  -5.3  -2.82327   TTCTGACAGGGAAAG               CAATG GATT CATTG                TGATTGGCCCAGCAA  49 20
HER31_RS06460 NONE
HER31_RS06455 NONE
HER31_RS06450 1359166 .. 1359182 -  -7.9   -2.6176   AAGGGCAGCGATAAG              CGCTCCC GTA GGCAGCG              AAAAGATGCGATCCG  55 231
HER31_RS06440 1356608 .. 1356620 -  -4.9  -3.59262   GCGTAGATTCCCAAA                TAGAT AGC ATCTA                CGTTTACCGTTATCG  57 138
HER31_RS06435 1355452 .. 1355468 -    -3  -3.88583   CAAACTCCTGATAAA              GCTAAC GCCCT GTTAAC              AGGCAAAAAATAGTT  54 102
HER31_RS06430 1355151 .. 1355162 -  -2.2  -4.18018   CTGCTTCATTTAAAA                GCAC AACT GTAC                 CATCAGCAGTAATCT  57 39
HER31_RS06425 1354492 .. 1354505 -  -8.1   -3.0701   ATAACGTTTAGCGAA               CCTGC GCGT GCAGG                TTGGTATTGTTGTTC  62 98
HER31_RS06420 1353897 .. 1353921 - -12.9  -3.74345   ATCCAGATACGGAAA          CGCCCAAAGTT ATT AGCTTTGGGCG          TTTCTTCTAACAAAC 100 62
HER31_RS06400 1349853 .. 1349871 - -11.7  -5.29782   CACAGCCATAAAAAA             GCCGACC ATATA GGTCGGC             GATTTGTGTAACTGT 100 40
HER31_RS06395 1348390 .. 1348410 - -15.5  -4.59853   TTAACCTGTGAAAAA            GGGAAGCTC ATT GAGCTTCCC            TTTTTTATTGGCTGT 100 339
HER31_RS06370 NONE
HER31_RS06365 NONE
HER31_RS06360 1343056 .. 1343071 -  -3.3  -3.70443   CTAGCAGCAAAAAAG              CTTAG CTAGAC CTAAG               TTAATAATACTGCTC  51 26
HER31_RS06350 1340983 .. 1341040 -    -6  -3.05463   AGCCGCTCGAGGTAA TCGTCGTAGTCGACATTATTACGCTGACA CGC TGTCAGCGTAATAA--TCAAC-ACAGCAA GGAAACTAGTTCGCG  56 31
HER31_RS06345 1339993 .. 1340017 - -14.3   -4.3586   GGAGCTATACTAAAA          CGCCTTGCAGC TAG GCTGCAAGGCT          TTCTTACGGTTAGCG 100 60
HER31_RS06340 NONE
HER31_RS06335 1339739 .. 1339758 -   -15  -4.70659   TTGTAGATGCAAAAA            GCCCGCTC AGTT GAGCGGGC             TTTTTGTGGATGGTG 100 36
HER31_RS06330 1338035 .. 1338078 - -10.7    -2.974   GTAATAGTTAAATGA TGTGCACTTCCAGT--TAATC GAGC GATTATAACTAGAAGTGCACA TGCTTATTTGAATCT  75 55
HER31_RS06320 1335571 .. 1335583 -  -4.1  -4.56791   AGTGAAAAACACAAA                CAGCT AAG AGCTA                GAATGATGAAACGGG  66 464
HER31_RS06310 1334478 .. 1334496 -  -6.6  -3.63589   GAAAACAGTTCCAAA             GCAGCGGG CTA CCCAATGC             ACGCACCAAACTACA  64 430
HER31_RS06305 1333004 .. 1333015 -  -3.6  -2.79312   AAAGCGCGTATGATA                GCCG ATTT CAGC                 TAAAAGTCAGAGTAG  43 111
HER31_RS06300 1332522 .. 1332543 - -13.1  -3.92324   CTGGGTAAGACCAAA           TGACCAAGC TGGT GCTTGGTCA            TTTTATTCGTAGGCG 100 51
HER31_RS06290 1330401 .. 1330458 - -18.6  -3.38991   ACTGCGGCAACAACA TTTCGCCCCAAACACAAAAAACCCGC ATTTAA GCGGGTTTGTTGTGTTTGGGGAGCTA ATAAGGCTCAGATTA 100 38
HER31_RS06285 1329166 .. 1329203 - -22.3    -4.128   ACCGCCATATATAAA   CAAAACCCGCTAACTCA GAAA TGAGCTAGCGGGTTTTG    TCGTTATGGGGCCAG 100 140
HER31_RS06245 1322912 .. 1322936 -  -6.3  -5.27779   GCCAAGATCAAAAAA          CGCACAAACCA TAA CGGAGTGTGCG          TTGTTATTACTGTGA  87 91
HER31_RS06240 1321710 .. 1321724 -  -2.1  -3.66654   TATCGCAACGGCAAA               CTACC CTAGT GATAG               CGCACCGATTATCAA  50 166
HER31_RS06210 1314607 .. 1314622 - -11.8   -4.7497   TTCAGCCACTAAAAA              GCCCGC GATA GCGGGC               TTATTGAGCAGCCTT 100 48
HER31_RS06205 1313167 .. 1313183 -  -9.3  -3.60475   AAGGGGGATTCCAAA              GGGGGCG GAG CTCCCCC              CTAATGCATACAAGA  75 142
HER31_RS06200 1311397 .. 1311420 - -16.8  -3.10905   CGATAAGTCAGTTAA          TGCCACCGCA GTAA TGCGGTGGCA           TTTTTTTAGGCTGTG 100 351
HER31_RS06165 1303198 .. 1303213 - -11.8  -5.08169   ACACAGCCTAAAAAA              GGCCCC TAAT GGGGCC               TTATTGTACCTGATT 100 50
        tusD NONE
        tusC NONE
        dsrH 1301677 .. 1301691 -  -2.8  -2.60496   TTCGCCGTTAAAGAT               CATTGT TTC ACCATG               CTACTTGTTGCTGGG  40 18
HER31_RS06145 1301318 .. 1301335 - -14.1  -5.24796   TGCAGATAACAAAAA             CGCCGGC AATG GCCGGCG              TTTGGATGAAGTTGC 100 43
HER31_RS06140 NONE
        napA NONE
HER31_RS06130 1297971 .. 1297983 -  -3.4  -4.17309   TATTAGAAAGAACAA                CAAC ACTTA GTTG                GTACACAGCCCTTAA  60 37
HER31_RS06125 1296554 .. 1296567 -  -2.3  -4.63486   ATCGGGTTAATAAAA               GCCGT ACCG ATGGC                GGTTTGGGAATTGGC  65 199
HER31_RS06095 NONE
HER31_RS06090 NONE
HER31_RS06085 1288546 .. 1288562 - -10.8  -4.84274   TAATCAGATCAAAAA              GGCGCC TTAAC GGCGCC              TTTTTAGTGTTTATA  95 83
HER31_RS06025 1274924 .. 1274950 -  -8.8  -2.69057   TGGTAAAGACAAGAG         CAGATGCTGTTA ACG CAACAGCATATG         GACAATTTGATGAGC  63 8
HER31_RS06020 NONE
HER31_RS06015 1273531 .. 1273541 -  -6.8  -3.14132   TTGGGTGGTTATTAA                 TGCG CTC CGCA                 AAGATTGGCATATCA  59 165
HER31_RS06010 1273103 .. 1273133 - -14.1  -4.77036   CGCTAGGATCAAAAA       GGGCGATGATTAC GTGAA GTAGTCATCGCCC       TCTAAATTTGTTGCT 100 72
         lon 1264778 .. 1264797 -   -15  -4.65895   TTGCCGATGGAAAAA            CGGGAGGC GATT GCCTCCCG             CTTATTATGGCTGTG 100 300
HER31_RS05985 1263711 .. 1263725 - -11.4   -4.8048   CGCTGATACTAAAAA               GGAGCC ACT GGCTCC               TTTTTAGTTTTTTGT 100 52
        cmoA NONE
        cmoB NONE
HER31_RS05930 NONE
HER31_RS05925 NONE
HER31_RS05920 1249968 .. 1249986 - -13.2  -4.89477   GTGCTAACAACAAAA             GCCACCTA AAT TAGGTGGC             TTAGTTATGCGTAAT 100 52
HER31_RS05910 1247896 .. 1247907 -  -2.2  -3.76379   CAACACCCTAGTAAA                GTCG ATGG CAAC                 TCAGCATCGGTATGC  50 445
HER31_RS05900 1245400 .. 1245416 - -13.7  -2.77043   GGGACGATTGCAAAG              GGGGCGA AGC TCGCCCC              TAATGCGTACAATAA  86 497
         ggt 1243424 .. 1243451 - -13.6  -4.15577   TTAACAAGCAAATAA        TTAAGCCACCGA ATAA TCGATGGCTTAA         TTGGTTAAAGCGAAA 100 58
HER31_RS05830 NONE
HER31_RS05825 1226458 .. 1226491 - -18.3  -3.68351   TTGTTATTAGCCAAA     CTGGCTGAGCTGAAA TCAA TTTCAGCTCGGCCAG      TGTTATTGCACTACT 100 39
HER31_RS05815 NONE
HER31_RS05810 1220153 .. 1220173 - -16.9  -5.12068   CACAGCCAATAAAAA            GGGCGCTAC CGA GTAGCGCCC            TGTAATGGGTGTTGC 100 58
HER31_RS05805 1218478 .. 1218503 - -16.9  -4.57569   GTAGTGTTTCAAAAA         GCCGGCAACCT AAGA AGGCTGCCGGC          TTTTTTGGTTTTGTT 100 468
HER31_RS05775 NONE
HER31_RS05770 1206856 .. 1206881 - -11.1  -5.02476   ACACCGCCTAAAAAA         GCGCGGACTCA TTAT CGAGTCCGCGT          TTTTGTTTTTCTGAT 100 47
HER31_RS05735 1196641 .. 1196654 -  -9.5  -4.21936   GGGACAACTGGAAAA               CCGCC AATG GGCGG                CAAATTGGCATGAGT  84 139
HER31_RS05730 1195515 .. 1195541 - -11.6  -4.59081   TAAATTGAGACAAAA         GTCACCCCAACC TTG GATTGGGGTGAG         AAACGTTGTGTTTTT 100 40
HER31_RS05725 1194783 .. 1194797 -  -2.1  -2.84229   ATAGGGTTAGCAAAG               CGACA ATCAG TGTCA               TTCATTAACCGTTAC  41 37
HER31_RS05720 1194210 .. 1194229 - -13.6  -4.86731   TGCTTGGAAAGAAAA            CTGCCGTC CAAT GACGGCAG             TTTGAGCAGAGTTAA 100 62
HER31_RS05715 1193362 .. 1193373 -    -3  -3.14564   TGAGTGTTTGATTAA                GTTA ACGT TAAC                 TTAGTCTAAATCGGT  45 256
HER31_RS05710 1191486 .. 1191502 -  -4.3  -2.62714   GTCAAGAAAAAGTAG              CACCGGC TGG GCGAGTG              TTGATACAAAGGGTA  46 489
HER31_RS05695 1189318 .. 1189343 - -17.7  -3.38316   GCAGCACTGAATGAA         GGCCCCAACTA GCAA TAGTTGGGGCC          TTTTTGCTGTTCGAG 100 104
HER31_RS05670 1182417 .. 1182440 - -10.3  -5.12068   CACAGCCAACAAAAA          TGCCACTCG GATGAG CGAGCGGCA           TTATCTGTAGTGACT  93 54
HER31_RS05665 1181110 .. 1181127 -  -5.5  -3.14211   ACCTGTCTCGAGGAA             GCTAAGC TCCA GCTTGGC              TTTGCCGGGGTAGCA  51 409
         acs 1175172 .. 1175196 -  -8.5  -4.44797   TTACTAACAGCAAAA          TGCCAGACAGC TAA GCTGAATGGCA          TTTTGTAGTTTGGGT  87 52
HER31_RS05650 1173743 .. 1173758 -  -4.6  -4.18018   GTGCTGTAGGTAAAA              CCGGTC GAGT GACTGG               AACTCATCTTCACTA  63 271
HER31_RS05640 NONE
HER31_RS05635 1167714 .. 1167725 -  -2.2  -3.28712   GGTTCTCGCTCACAA                CAAG CTCT CCTG                 ACTGCCGGACTCCGC  45 8
HER31_RS05630 NONE
HER31_RS05625 1165384 .. 1165401 -  -5.5  -5.43866   TAACCGCCAAAAAAA             CCAAACG AGTT CGATTGG              TACCCCATAGCCCAC  91 261
HER31_RS05615 1163253 .. 1163268 -    -9   -3.5362   CAATTCGCACAAATA              GACCAC TTAT GTGGTC               GCTTGGTGAGAAGCG  73 271
HER31_RS05610 1162937 .. 1162960 -  -9.6  -5.54192   ATGAATTTAAAAAAA          GACTACAGCC TTGC GGCTGTAGTA           AGTATAGCTAAAGGG 100 59
HER31_RS05605 1162621 .. 1162634 -  -9.5  -5.77988   ATAGATACAAAAAAA               CCCGC AGAT GCGGG                TTTTTTTAAGCTTGT 100 62
        yfcE NONE
HER31_RS05590 1160778 .. 1160798 -  -7.5   -3.7795   CTAAATTGGAGCAAA            CCGGCGCAA CAT CTACGCCGA            TTTGGACTTGGGGTT  67 154
HER31_RS05575 1157485 .. 1157501 - -13.7  -5.08169   ACACAGCCCAAAAAA              GCCCGCA AGA TGCGGGC              TAATAGAAGTAATTA 100 50
         rnt 1155456 .. 1155479 - -15.4  -4.87626   CGCTAACAGCAAAAA          TGCCAGTCAG CGAT CTGACTGGCA           TTGGCATATTCAGCT 100 59
HER31_RS05555 1153073 .. 1153090 - -12.7   -4.1021   CCTTAGAATGACAAA             CCCCAGC ATTT GCTGGGG              TTTTTCCATACTGGT 100 48
HER31_RS05550 NONE
HER31_RS05545 1150905 .. 1150921 -  -9.4   -5.4833   TTAGGCAATAAAAAA              GCGACC ATTGA GGTCGC              TTTGTTTGAACAAGC 100 45
HER31_RS05500 NONE
HER31_RS05495 1139790 .. 1139811 - -15.9  -4.65895   CTTTTTATCTAAAAA           GCCCCCGAA CCGT TTCGGGGGC            TTTGCTCAATAACTT 100 65
HER31_RS05490 NONE
HER31_RS05485 NONE
HER31_RS05480 1136267 .. 1136309 -  -2.7  -4.13767   GGTCGCAGTCCAAAA CGCTTCGCTGAACTGCT-CCG ATG CGGCAGAAGATCAACGACG-G CAGTGCTTTACCCTT  56 151
HER31_RS05475 NONE
HER31_RS05470 NONE
HER31_RS05465 NONE
HER31_RS05360 1119990 .. 1120006 - -10.1  -4.40963   AGCGGGCAAAAACAA              GGAACGC AAT GCGCTCC              TGAACTAAATATCGT  87 44
HER31_RS05355 1118859 .. 1118870 -  -2.2  -2.56806   ATTAAGGTACAACAG                CAGG GTTA CCTA                 AAGGGGATGTTGGCT  39 278
HER31_RS05345 NONE
HER31_RS05340 NONE
HER31_RS05335 1112694 .. 1112716 -   -12  -4.42386   CCCCCAGCTAGAAAA           CCGGACAACC ATT GGTTCTCCGG           GCTTTTTATTGGCGG  95 421
HER31_RS05325 NONE
HER31_RS05320 1110005 .. 1110016 -  -3.6  -3.31144   TTGGGATTTCGAGAA                CAGC CCGA GCCG                 TGGGGTAACAGCGGC  48 69
HER31_RS05245 NONE
HER31_RS05240 1102906 .. 1102924 -    -3  -3.30908   CATTAAATATGAAGA             TCACCGCC GAA GGGGTTGA             AAATCAATTCCAAGA  46 130
HER31_RS05220 1099583 .. 1099603 -  -2.6  -3.09933   GTCCAACCGATGCAA            CGTTCTAA GGCCG TTAGAAGG            TTATATTACGCATCA  43 81
HER31_RS05215 1099389 .. 1099409 -  -2.6  -3.09933   GTCCAACCGATGCAA            CGTTCTAA GGCCG TTAGAAGG            TTATGTTACGCATCA  43 81
HER31_RS05210 1099195 .. 1099215 -  -2.6  -3.09933   GTCCAACCGATGCAA            CGTTCTAA GGCCG TTAGAAGG            TTATGTTACGCATCA  43 81
HER31_RS05205 1099001 .. 1099021 -  -2.6  -3.09933   GTCCAACCGATGCAA            CGTTCTAA GGCCG TTAGAAGG            TTATGATACGCATCA  43 81
HER31_RS05200 1098852 .. 1098871 - -13.6   -5.5353   CACAGCAATAAAAAA            CGCCATCC GAAT GGATGGCG             TTTTTTTAATATGGT 100 37
HER31_RS05190 NONE
        queC 1096296 .. 1096306 -  -5.4  -3.06183   GTTACCTTTAGTCAA                 GTTG GCA CAAC                 CCCTGTTGCTGTTTG  52 7
        rrtA 1095249 .. 1095267 -  -3.8  -4.68124   TTAACATATATAAAA             CACAGCTA GTG TAACTGGG             GGGCGACTAGGTGTA  69 445
HER31_RS05165 1091930 .. 1091945 -  -5.4  -3.58343   CCGAGCATGTCGAAA              CATCGC CGAA GCAATG               ATTCTAAATAGTGGC  59 37
HER31_RS05160 NONE
HER31_RS05155 1091684 .. 1091699 -  -5.4  -3.58343   CCGAGCATGTCGAAA              CATCGC CGAA GCAATG               ATTCTAAATAGTGGC  59 37
HER31_RS05150 NONE
HER31_RS05145 1091438 .. 1091453 -  -5.4  -3.58343   CCGAGCATGTCGAAA              CATCGC CGAA GCAATG               ATTCTAAATAGTGGC  59 37
HER31_RS05140 NONE
HER31_RS05135 1091192 .. 1091207 -  -5.4  -3.58343   CCGAGCATGTCGAAA              CATCGC CAAG GCAATG               ATTCTAAATAGTGGC  59 37
HER31_RS05130 NONE
HER31_RS05125 1090946 .. 1090961 -  -5.4  -3.58343   CCGAGCATGTCGAAA              CATCGC CGAA GCAATG               ATTCTAAATAGTGGC  59 37
HER31_RS05120 NONE
HER31_RS05115 1090700 .. 1090715 -  -5.4  -3.58343   CCGAGCATGTCGAAA              CATCGC CGAA GCAATG               ATTCTAAATAGTGGC  59 37
HER31_RS05110 1090427 .. 1090440 -  -6.7  -3.09834   GATGTGAGTATTTAA               TCTCG CTGC CGAGA                GTCTGTTGTACTGAA  58 167
HER31_RS05105 1090175 .. 1090188 -  -6.7  -3.09834   GATGTGAGTATTTAA               TCTCG CTGC CGAGA                GTCTGTTGTACTGAA  58 168
HER31_RS05100 1089923 .. 1089936 -  -6.7  -3.09834   GATGTGAGTATTTAA               TCTCG CTGC CGAGA                GTCTGTTGTACTGAA  58 168
HER31_RS05095 1089796 .. 1089811 -    -9  -5.24989   GTAGATACGAAAAAA              CCAACC CTAA GGTTGG               CTTTCTCTGAATATG 100 41
HER31_RS05010 1071735 .. 1071746 -  -5.8  -2.68142   TACAGCAACAAGGCA                GTGC AGTG GCAC                 GAGCAGTTGTGTGCG  50 231
HER31_RS04990 NONE
HER31_RS04985 NONE
HER31_RS04980 NONE
        dmsB 1061641 .. 1061669 - -13.3  -3.11072   TTTAGTTAATAGATA        GGCCGCTTAAT AGGCTTA ATTAAGCGGCC        TTGTATGTTAAACCT  86 33
HER31_RS04965 NONE
HER31_RS04960 1056756 .. 1056768 -  -2.7  -3.08032   TTCCTTTTAAAACCA                TTACA AAT CGTAA                CTAAAAGTCAGCATG  43 13
HER31_RS04955 NONE
HER31_RS04950 1053638 .. 1053648 -    -4  -3.09516   GGCTCGATGAGTTAA                 TATG CTT CATA                 TCTATTTGGGTGTTT  47 49
HER31_RS04945 1052836 .. 1052846 -  -2.6  -3.57263   ATGTGTAGCCTGAAA                 TTAT TTG ATAA                 ATACAACATTCTTCG  50 106
HER31_RS04940 NONE
        dmsB 1049592 .. 1049620 - -13.3  -3.11072   TTTAGTTAATAGATA        GGCCGCTTAAT AGGCTTA ATTAAGCGGCC        TTGTATGTTAAACCT  86 33
HER31_RS04915 NONE
HER31_RS04910 1042324 .. 1042342 - -10.2  -3.60475   AAGGGGGATTCCAAA             GGGGGCGA AGC TCCCCCCC             CCTAATACACACAAG  78 293
HER31_RS04875 1033172 .. 1033214 -  -4.9  -4.13767   GGTCGCAGTCCAAAA CGCTTCGCTGAACTGCT-CCA ATG CGGCAGCAGATCAACGATG-G TAGTGCTTCGCTCTC  63 129
HER31_RS04870 1031614 .. 1031635 - -14.5  -4.72486   GATAAACGGCAAAAA           CCAGAGCGA GTAA TCGCTCTGG            TTTTTTTTATGCTGT 100 278
HER31_RS04835 1021894 .. 1021938 -   -21  -3.01924   TACCCCGCTCTAATA CAACCAAAACGGGCGCTATC TTAAC GATAGCGCCCGTTTTATTTG GCTGTGTACCAACTA 100 443
HER31_RS04755 1004768 .. 1004783 - -10.4  -5.60864   CACAGACCAAAAAAA              GCCCCT GTGC AGGGGC               TCTTAATATTACGCT 100 40
HER31_RS04750 1002435 .. 1002451 -  -6.5  -3.28745   CGCTTAAGAAGCTAA              CGCCC TGTTAAT GGGCG              GCAAAATGTAGCGGC  59 114
HER31_RS04745 NONE
HER31_RS04740  999653 ..  999669 -  -5.8  -3.63991   GATTATCTCCAATAA              CGCCTC AATCA GAGGCA              AAAAATAGTTGGTTA  59 102
HER31_RS04735 NONE
HER31_RS04730  998275 ..  998290 -    -9  -3.60792   TTGTTAATGTTCAAA              GCAACC ACTC GGTTGC               AGCCACCGCCACACG  70 493
HER31_RS04705 NONE
HER31_RS04700  989260 ..  989270 -  -3.2  -4.25681   ACCTAATCGAATAAA                 GCAT ATA ACGC                 CGCGCTCACCGGCAA  60 119
HER31_RS04695 NONE
HER31_RS04690  987921 ..  987931 -  -5.4  -3.17763   CCGACACGGTATTAA                 TTCC ATT GGAA                 TCAATGAAGTAGTCA  51 509
HER31_RS04680  987290 ..  987302 -  -3.4  -3.59315   CGAATCACTCTTAAA                TGCT TTGTT AGCA                CTCTGATTTTAAACT  51 20
        hypA  986471 ..  986492 -  -5.9  -4.41494   TAGGCGCAACCAAAA           TGACCGT GTGGTATT ACGGTCA            TGGCAACAACATTAA  70 68
HER31_RS04575  963113 ..  963154 - -16.7  -3.24166   ACTCAAGCAATGCAA CCACAGCAGTTCACTCCAT CATT ATGGTGTGAACTGCCGCAG  GGTCGCTAGAGAGGT 100 67
HER31_RS04570  962026 ..  962038 -  -3.4  -4.17309   TATTAGAAAGAACAA                CAAC ACTTA GTTG                GTACACAACCATTTA  60 256
HER31_RS04565  959891 ..  959924 - -13.3  -3.97019   ATGAATTGCAAATAA     TTATGGCGCCAATCA ATGT TGATTGACGCCATAG      CCTTTTTATTTGCTA 100 31
HER31_RS04560  958216 ..  958227 -  -5.8   -3.5936   TGGAAACCGTTGAAA                GCCA CGGC TGGC                 TTCGCAGCGAAGAGA  59 402
HER31_RS04550  957077 ..  957089 -  -6.9  -2.69964   GTTTTAAGCAGATCA                CCGGC GTT GCCGA                GCATGCTCATTAGGT  55 464
HER31_RS04540 NONE
HER31_RS04535  956266 ..  956278 -  -3.4  -3.33525   TTTACCGATAGAACA                GACA TTATT TGTC                CTTGTGCATGTTCCG  48 17
HER31_RS04530  953867 ..  953898 - -18.8  -4.66987   CACAGCCGAATAAAA      TGGCCACGCTACCG AATA CGTTAGCGTGGCCA       TTATTAAGGCGGTAT 100 331
HER31_RS04495 NONE
HER31_RS04490 NONE
HER31_RS04485 NONE
HER31_RS04480 NONE
HER31_RS04475  943408 ..  943422 -  -7.8  -2.63631   TCAATTTTCATAGTA               GTGACC GGA GGCCAC               AAATCTGCTCAATAG  59 66
HER31_RS04470  941070 ..  941088 -   -16  -4.68655   GAAGTGGAAAACAAA             GGCAGGCC AAT GGCCTGCC             TTTTATCGGAATAAC 100 50
HER31_RS04465  939976 ..  939990 -  -7.1  -3.68619   TCCAATGCAGTTAAA               GCACC GGCTA GGTGC               GTCCCAATACTAGGG  67 262
HER31_RS04460  937698 ..  937733 -    -6  -2.73243   AGCGATTGGCCAAAG    GTTAAGCGCCTCAGAG CAAA CTCTGAGGCGTATTTC     ACACTTGCAACACCT  53 24
        rsxA NONE
        rsxB  936470 ..  936482 -  -3.3  -3.74693   GTGCACGTTATGAAA                CCTGT TTC ACTGG                AATTCGGGCAATATC  53 5
        rsxC NONE
        rsxD NONE
        rsxG NONE
HER31_RS04430 NONE
         nth  930522 ..  930532 -  -5.4  -2.67425   GATATAATTTAGAAG                 TTGC AGA GCAA                 ACGATTCACTTTTTA  47 126
HER31_RS04405  927031 ..  927047 -  -7.9  -3.60475   AAGGGGGACTCCAAA              GGGAGCG AAG CTCTCCC              CTAATGCATACAAGA  69 466
HER31_RS04385 NONE
HER31_RS04380  923676 ..  923691 -  -4.6  -2.52543   ATCGTTGTCAATTTA              GTTGGC GACA GCCAGC               TTCTCTTCGGCGCTG  46 7
HER31_RS04375  922918 ..  922930 -  -3.4  -4.20148   AGCATTGGAAAAGAA                CAAC ACTTA GTTG                ATACACAGCCTAAGA  60 127
HER31_RS04370 NONE
HER31_RS04365  921388 ..  921407 -    -8  -3.21416   GAGCGCGAGGAGTAA            CTAAATGA CGTT TCATTTAG             CCTCCAAAACTGCGG  64 22
HER31_RS04360  920188 ..  920225 -  -8.5  -3.38603   AAATAGCGGTAAATA   GGACGGACT-ACGGTAGT TTC ATCACCGCCAATCCGTCC   TTGCTGAAAGATCAG  69 37
HER31_RS04345  918373 ..  918400 -  -7.8  -2.56839   AAGAGAGGTAAGTCA        GTGAGTAAGCTT ATTC AAACATACTCAC         CATCCGCTGTAGCGA  59 177
HER31_RS04340  916378 ..  916394 -    -3  -3.91084   GGATCGCCAAGCAAA             GCATCCC ATCG GGGAT-C              ATACGCCAATGGGCA  54 334
HER31_RS04310 NONE
HER31_RS04305  906241 ..  906258 -  -7.7  -4.57581   ACTTTAAACAAGAAA             CCACACC TAAC GATGTGG              TTACTGTGATTGCTA  79 163
HER31_RS04295  902886 ..  902903 - -12.7  -4.96773   CTAACTAAAAAGAAA             GGGAGCC TAAC GGCTCCC              TTGTTAGCTTATCTT 100 47
HER31_RS04290  902306 ..  902317 -  -4.4  -3.34902   CGGCAGCACAGAACA                CAGT CAGT ACTG                 AGAACCGGGGCGCAC  52 117
HER31_RS04285  901824 ..  901855 - -14.6   -4.4009   GTTGAGCTTATAAAA      TCAAAAAACCAGCC TTAC GGCTGGTTTTTTGT       TGATATTGAGGAGTG 100 42
HER31_RS04255 NONE
HER31_RS04250 NONE
HER31_RS04245  895106 ..  895145 -   -26  -3.10975   ATGGACTAGCTAAGA  GCGACCAAGCCCACAACGG AGG CCGTTGTGGGCTTGGT-GC  TGAAGGTGGTCGGCC 100 32
HER31_RS04240  894136 ..  894148 -  -7.7  -2.64735   ACTTTATTGATACCA                TCTGC ATT GCAGA                AGTAAAGCACTAAGT  59 246
HER31_RS04235  891737 ..  891748 -  -3.6  -3.24597   AACCCCCAACGAATA                CAGC CTAT GCCG                 ATAGTAGCCGATTGG  46 53
HER31_RS04230  891327 ..  891346 -  -5.8   -3.5947   AATTGGCAGAGATAA            TCAC-TAGG CAT CCTATGTGA            ATCAACCTCCTTGTG  59 81
        yegD  889257 ..  889292 -   -22  -4.04206   TGACCGCCATATAAA    CAACAACGCCCCGCAC GAAA GTGCGGGGCGTTTTTG     TTTGGTTGTGTACCA 100 469
        msrA  881001 ..  881017 - -13.7  -3.72363   CAGTTAAATGCCAAA              CCCGAGC TAA GCTCGGG              TTTGTTGTTTGTGGC 100 112
HER31_RS04165 NONE
HER31_RS04160 NONE
        ybfE NONE
        fldA  875536 ..  875551 - -11.8  -4.85129   AGCAGACATGAAAAA              GGCCGC GTAA GCGGCC               TTTTCGATAAAGAGT 100 45
HER31_RS04140 NONE
        yfbR NONE
HER31_RS04130  871520 ..  871550 - -15.5  -3.54424   GGTTAGCTGCTCAAA       CAGTAAGGGCGCC TGTAT GGCGCCCTTACTC       GTTATAAGAAACTGG 100 115
HER31_RS04120  868402 ..  868418 -  -9.3  -3.33162   GAGGGTATTGCATAA              GGGGGCG GAG CTCCCCC              TCAAATGCATACAAG  71 222
HER31_RS04115 NONE
HER31_RS04110  866354 ..  866372 - -13.1  -5.42259   CGATGGTTAAAAAAA             CCGGCGC TATTG GCGCCGG             TTTTTTATTGCGTAG 100 30
HER31_RS04055 NONE
HER31_RS03980 NONE
HER31_RS03975  843936 ..  843960 - -17.2  -4.74132   ATAGCGCAGGAAAAA          GGGCGAGAGG GAATA CCTCTCGCCC          TTTTAAAATTTTGGT 100 92
HER31_RS03950  838281 ..  838316 - -11.8  -3.08679   TGCGGTGATTGAAGA    TCCTGCTGGTGCGGTG TTAG CACTGTACCAGCAGGC     TTAAACAATCTAAGC  81 35
HER31_RS03940  835652 ..  835671 -  -7.1  -4.98531   CCCTCAAATGAAAAA            CCCCTAC ACAGTG GCAGGGG             TTTGATTATAAATGT  84 47
HER31_RS03935 NONE
         cls NONE
HER31_RS03925 NONE
HER31_RS03920 NONE
HER31_RS03915  831398 ..  831419 -  -5.2  -4.16016   GTATGCGGCAATAAA           CT-CAAGCG TTGGC CGCTTGCAG           CTCTAACTGTTGCGC  65 5
HER31_RS03910 NONE
HER31_RS03905 NONE
HER31_RS03900  829364 ..  829374 -  -5.4  -3.55563   ACTCGAGCTTGTAAA                 GGAT ACT ATCC                 TTGTTGGTCATAGTT  57 504
HER31_RS03895  827106 ..  827123 - -14.1  -4.89567   GTTGAAAATAGAAAA             GCGCCGC AGGT GCGGCGC              TTTAGATGTTCGACT 100 122
HER31_RS03890  826431 ..  826461 -  -9.1  -3.21464   AACATTAACATCCAA      TATCAATGGCCTGC CTTG GCGGGCC-TTGATA       GATACGTTAGGACGA  70 46
HER31_RS03885  824783 ..  824796 -  -8.1  -3.39803   GATCGATATTCACAA               CCACC AGCA GGTGG                CTGCGTTAGCGATTA  65 55
HER31_RS03880 NONE
HER31_RS03875  823102 ..  823128 - -10.9   -3.9644   TCGGTAAGACAACAA        TCCCCACACAGC CTGC GCCG-GTGGGGA         TTTTAGTTGAGACTG  86 57
HER31_RS03865  821424 ..  821442 - -14.6   -4.8622   TGCGGCAATGAAAAA             GGCGAACC TTT GGTTCGCC             TTTTTGCATCTAAGC 100 68
HER31_RS03850  817027 ..  817052 - -14.9  -4.01703   ACAACACTCAAACAA         TTAATGCGCCA TTAT TGGCGCATTAA          TATTACCTGCTTTGG 100 68
HER31_RS03840  815339 ..  815359 -  -2.5  -4.83593   AACAACCAGTAAAAA            TGAAGAGGG GAT CACTGTTCA            TCTGTTTAAAAAATT  68 162
HER31_RS03835  814601 ..  814631 -   -14  -3.95852   ACTTTAGCAACCAAA       GAGAAGGGCGTGCC ATT GGCACGCCCTTTTT       GTTTGTCTTAGATCC 100 73
HER31_RS03820  810719 ..  810735 - -12.3  -5.04325   TTTAAAGGATAAAAA              GAGCGCA ATA TGCGCTC              TTTTTTAATGCTGTG 100 225
HER31_RS03800 NONE
HER31_RS03795  802159 ..  802179 -  -2.6  -4.59027   AAGCATTACAGAAAA           TGGCTCAGT TGGC ACC-AGCCA            ATGTCGGGGTTTTGA  63 153
HER31_RS03790  801486 ..  801507 - -15.9  -5.00616   GTTTGCCCTAAAAAA           CAGGCAGCC ATAA GGCTGCCTG            TTTTGCTTGAACAGA 100 47
HER31_RS03765  796124 ..  796139 -  -2.6  -2.69964   GTGTTAATCACAGCA              GT-ACCA CAG TGGTTAC              AGAACTTTGCTGACG  41 98
HER31_RS03755  795433 ..  795454 - -10.2  -3.95022   GTGAGCAATAGCAAA           CGGCAACT CAGGTT AGTTGCCG            TTGTTATTCCCGTTA  82 91
HER31_RS03740 NONE
HER31_RS03735 NONE
HER31_RS03730 NONE
HER31_RS03725  788785 ..  788797 -  -3.3  -2.60901   ACAGGCTCAAGTAAT                GTTCC ATG GGATC                CCCTTAGCGCTTACG  42 29
        nqrE NONE
        nqrF  786897 ..  786929 - -17.1  -3.83026   GGCGCCGATAGTAAA      CGAAAACGAGGTACC AAG GGTACCCCGTTGTCG      ATTTAGTTAGTCACC 100 32
        nqrM  786561 ..  786587 - -15.3  -5.12068   CACAGCCAATAAAAA         CGCCGTTGATA GGGGA TATCAACGGCG         TTGTAACGGCTAGGC 100 50
HER31_RS03705  784116 ..  784128 -  -3.3  -3.68341   AATCCCACTGAATAA                CGACA GGT TGGCG                AGTCACTTTAAACAA  52 433
        rpoS  780946 ..  780966 - -12.6  -5.08169   ACACAGCCCAAAAAA            GGATCGGC TCAAT GCCGATCC            TTCTCTATTCCACAC 100 49
HER31_RS03655 NONE
HER31_RS03650 NONE
HER31_RS03645 NONE
HER31_RS03640  770570 ..  770594 -  -5.7  -3.09273   TGTCTCCAACATATA          CCGCTTTTATA TTA TCTATAAGCGG          GTACTAGCGGAAGCT  53 54
        sbcB NONE
         cdd  766306 ..  766327 -   -13  -5.04597   ATCGACATACAAAAA           CGCCACCG TAATTG CGGTGGCG            TTTTCTGTTAGGCGG 100 94
HER31_RS03575  758126 ..  758155 -  -4.3  -3.36671   AGGCGAAGCGGATAA       CCGGTGCG-GCTAA CGG TTAACTCACAGCGG       TTTGTTGTTGCAGTA  52 12
HER31_RS03570  757283 ..  757296 -  -2.4  -3.06133   GAAGCCTTTATCGAA               TGCT ACCGTA AGCA                TTACTTCGCGTTGGA  42 427
         rne  752138 ..  752157 - -13.6  -5.03994   CTGTAGATATAAAAA            CGGCCACT CAAG AGTGGCCG             TTTTCTATTTAGCAC 100 44
HER31_RS03545  749826 ..  749845 - -13.6  -4.81083   GTGAATTATCAAAAA            CGGCCACA TTAC TGTGGCCG             TTTTTAGTAAAGGGT 100 55
        queD  747230 ..  747246 -    -3  -2.82327   GTGTCAGATTGAAAC             CAGTGGT TGTT ACC-CTG              TGTTGTGTGACGCGC  41 369
        pepE  743323 ..  743342 -  -7.2  -3.14211   ATTGCTTTTGAGGAA            GCGAT-TGC GCC GCATATCGC            CGCTAAACGTAGCCA  59 452
        bioA  738462 ..  738472 -  -6.8  -3.63569   GCAAGCCGGCAATAA                 GCAG GTG CTGC                 ATATGCACGGGGAGT  62 408
         fur  737534 ..  737550 - -10.8  -6.02914   CCGAGACAAAAAAAA              CGCCGC AAGAA GCGGCG              TTTAGTCGACTCGGT 100 48
HER31_RS03460  735826 ..  735845 - -10.7  -4.41494   TAGCTGGAACGAAAA            CCGACGC TCTTAG GCGTCGG             TTTTTTGTTTAGGGA  90 79
HER31_RS03435  727858 ..  727886 - -13.1  -3.84887   ACAAAATTTAGTAAA        GCCGAAGCGGCTA AAA TGGCCGCTTCGGT        TATCGCCTCTTAGTG 100 35
HER31_RS03430  725748 ..  725766 - -11.7  -3.47361   TATATGCATTAAATA             GGGGAGG GCGAG CCTCCCC             GCAGGCTTGGTTAGA  88 36
HER31_RS03425 NONE
HER31_RS03420  722737 ..  722754 - -12.7  -5.26918   ACAGCCTACAAAAAA             GCCCACC AAAA GGTGGGC              TTAGTAAAACTAACG 100 45
HER31_RS03415  720705 ..  720720 - -11.8  -2.74263   AGCGCATTCTTAAAG              CCGCCC TGAT GGGCGG               TTTAATGTTGCTCTG  74 475
HER31_RS03400  719279 ..  719301 -  -8.5  -3.90761   TAATGCATACAAGAA          TATGCCGTCG CCAC CG-CGGCATA           ACCCCTTAAGAGAAC  76 154
HER31_RS03390  717670 ..  717686 -  -9.3  -3.76952   GTGACCTAAGGCAAA              GGGGGCG AAG CTCCCCC              CTTATGCATACAATG  77 362
HER31_RS03315  698932 ..  698947 - -10.4  -5.71712   TTGGACATAAAAAAA              CCAGCC CTAG GGCTGG               TTTTAATGGAGTAGC 100 47
HER31_RS03310 NONE
HER31_RS03305 NONE
HER31_RS03300  691310 ..  691330 -  -7.5  -4.15453   CAACTTAGTTGAAAA            TGGCACCGC AAT GAAGTGCCA            TTTATCAAGCTGCTG  74 53
HER31_RS03295 NONE
HER31_RS03290  689979 ..  689997 - -10.3   -5.3321   AAGTAACAATAAAAA             GAGCACC GCTAA GGTGCTC             TTTTTGATCCTAGTG 100 50
HER31_RS03260  683427 ..  683447 -  -8.3  -5.08169   ACACAGCCTAAAAAA            TGGCAGC TCTAGTG GCTGCCA            TTTTTATATCTTGTT  91 45
HER31_RS03230 NONE
         mfd  675079 ..  675089 -    -4  -3.33696   GCTGTGGGCAAGCAA                 TGAT TTC ATCA                 GTTAAGATCCGCAGA  50 23
HER31_RS03220  673752 ..  673762 -  -5.4  -2.78384   CCGCGGTTTACTAGA                 CTAG TAA CTAG                 TAGAGCAAGGCGGCT  50 340
HER31_RS03205 NONE
HER31_RS03200  669321 ..  669364 - -17.6  -3.07431   AAAATAGGTCGAATA GCGAGCGTAGCTG-TGAGC GTAAACG GCTCAACCGCTACGCTCGC ATTAGGCACCTACGG 100 27
HER31_RS03195 NONE
HER31_RS03190 NONE
HER31_RS03185  665345 ..  665372 -  -3.4  -3.07891   GAGAACGATAAACGA        GCGCTTTACCAT TGTG ATAACAAGGCGC         CGCAACAATGAGCTC  45 448
HER31_RS03165 NONE
HER31_RS03160 NONE
HER31_RS03155  660047 ..  660060 -  -2.4  -2.52464   CTCGCTTCCAATGTA               CAAC TCCTCT GTTG                GCTACGTTACTGAGT  39 78
        tmpT  659365 ..  659396 -  -9.5  -2.51133   GAGTTAGCGAGCAAT      TAGCAGGGCAACC TATTTG AGCTACCCTGCTA       TTTGTTTAACTTAAC  68 36
        miaB NONE
HER31_RS03125 NONE
        ybeY  648020 ..  648033 -  -3.8  -3.25786   TAGATTAGAATCGAA               CGCT CAGATT AGCG                CTCTTGGTAGGGATC  48 20
        corC NONE
         lnt NONE
HER31_RS03105  644481 ..  644493 -  -3.4   -3.9392   CTGCATTGGAAAGAA                CAAC ACTTA GTTG                GTACACAGCCTTTTG  55 225
HER31_RS03060  630732 ..  630743 -  -4.4  -4.73613   CCACCATTAATAAAA                CCAT GCAG ATGG                 GAGCTAATGGCTTTG  70 380
HER31_RS03040  625214 ..  625237 -  -5.2  -2.71364   TGATGGTGCTAATGA          TTTGCCGATG CTAG CAACGGCCAA           CCTAGGCGTTGGCTT  48 125
HER31_RS03030  623270 ..  623292 - -11.9  -2.87354   CCAATGAAGTAATGA           CGGGCGGCC AATTA GGCTGCCCG           TTTTTTTATCTGCTT  80 14
HER31_RS02965  608321 ..  608341 - -18.3  -4.07618   CTTTTAATAACCAAA            CGGCCGCTC ATT GAGCGGCCG            TTTTTTTATGGGACA 100 56
        yhbY  593568 ..  593589 - -15.9   -5.4756   AAGCGCAACAAAAAA           GGGAGAGGC ATAA GCCTCTCCC            TTTTTGTTCCAGCAG 100 53
HER31_RS02845  582004 ..  582035 -   -16  -2.72511   TTGAGCCGCTCAAAC      TAAAACGGCCACTC AATT GAGTGGCCGTTTTT       ATAGGTACCGATAAT 100 40
HER31_RS02830  577389 ..  577410 - -15.9  -4.48987   TGTGCACAACTAAAA           GCGGTGCCA TTAA TGGCACCGC            GAATGTTTCGTCGTA 100 258
HER31_RS02820  575786 ..  575802 - -10.1  -4.89838   TCAATAAACAGAAAA              GCCCGCA AGA TGCGGAC              TTCGTATACAGCTAA  93 55
HER31_RS02815  574930 ..  574945 - -10.4  -4.74706   TGTAAGACTGAAAAA              CCGAGC CTAG GCTCGG               TTTTTTTGTATCTGT  91 55
        nadK  573112 ..  573135 -  -7.5  -3.23708   TGGGGCCAAAAATCA          CCGCTTATCG GATCT CGA-AAGCGG          GTCTTAATGCCTTAA  61 255
        recN NONE
        yiaY  569500 ..  569516 - -10.8  -5.12707   GGAAAGTTCAAAAAA              GGGGCC ATTCA GGCCCC              TAATCGAAATGTTGG 100 48
HER31_RS02785  568931 ..  568957 - -12.4  -3.76174   AAACCGACGAAAATA         GAAAAGCCGACA TAA TGTCGGCTTTTT         GTTGTGCTGATTAAG 100 45
        smpB  567512 ..  567552 -  -3.4   -2.5882   CCCAAGTAGAAAACG  CAGTTTACCATTGATG TGGCATAAG CTCCAATAGCAAACTG  TACAGACAACCAGCA  42 42
        ssrA  567098 ..  567124 -  -9.4   -5.5208   TTAGAATACAAAAAA         GGCTTGAAACTC TAA GAGAATCAAGCC         TTTTTCCAAACGTTT 100 40
HER31_RS02720  555190 ..  555201 -    -3  -3.20207   AACAGCATCGACCAA                CTTA AAGC TAAG                 CTTGGCAAAGTGGTG  46 191
HER31_RS02705 NONE
HER31_RS02695  550509 ..  550529 - -10.5  -5.71712   TGGTACACAAAAAAA            GCCACAATC GAC GATTATGGC            TTTTCTTAGCTGCGA 100 143
        astB  545540 ..  545557 -  -5.5   -2.7186   AAACGTGGTTAATTA             CTGGCAA ATGT TTGCCTG              AAAATTATACGTGAC  50 185
HER31_RS02680  543842 ..  543879 - -20.1  -4.12188   GCAGCATTGCTAAAA   CAAAAGAGGCCAAGCAG TTAT CTGCTTGGCCTCTTTTT    TATCTCAACTAATCG 100 42
HER31_RS02665  538791 ..  538808 -  -8.4  -4.90906   TTATAACAGTAAAAA             GCCGAG ACAAAG CTCGGC              TGTATTTAATTAACG  91 60
HER31_RS02660  538309 ..  538333 - -21.5   -2.6927   ACGCTGTAGATACCA          CAGGGGAGCCC ATT GGGCTCCCCTG          TTTTATATGTGTGCT 100 212
        aroF NONE
HER31_RS02625 NONE
HER31_RS02620 NONE
        trpD NONE
       trpCF NONE
        trpB NONE
        trpA  526531 ..  526573 -  -4.4  -3.58869   CACAAAGTTACACAA CGGATTCAGGCTTGA--ACGC ATAA GCATACTCAAGCCC-AATCCG CTTGTCAGCCTAGCT  55 35
HER31_RS02595  525933 ..  525949 - -13.7  -5.83822   CACAGCCAAAAAAAA              CGCCGCA ATG TGCGGCG              TTGGAATCAACTGCG 100 49
HER31_RS02590  523964 ..  523987 - -16.8  -4.80453   GGAGCAGAAAACAAA          CAAGCCGCCT AATA AGGCGGCTTG           TTTTCCAGTCGAGCG 100 46
HER31_RS02585 NONE
        xthA  522710 ..  522725 - -11.8  -5.26316   TGAGTGCATAAAAAA              CGGCGC CTAA GCGCCG               TAATTTTATTACAGT 100 51
HER31_RS02575  522012 ..  522031 - -12.2   -5.4492   TACAGATACAAAAAA            GGCTAACC CTAG GGTTAGCC             TTTTTTAGTGGTACG 100 47
        pflB  517346 ..  517368 -  -9.1   -5.4505   TGTTCCAATAAAAAA           GGCCTCACC ACTGG GGCAAGGCC           TTTGTCACTAGCGCT 100 58
        pflA  516431 ..  516450 -   -10  -5.79526   ACAGCCCAAAAAAAA            CGCCGAGT GAAA ACTCAGCG             CTTAATAGGCAGTTA 100 49
HER31_RS02540  514047 ..  514063 - -13.7   -5.1356   TTGTATTAATAAAAA              CGGGCTC CAA GAGCCCG              TTTATCAAAAGCGGT 100 41
         pta  511831 ..  511847 -  -9.4  -5.65177   ACAGCCATAAAAAAA              CCGGAC ATTAA GTCCGG              TTTTGTTGATGCGTA 100 55
HER31_RS02510  508188 ..  508199 -  -2.2  -3.67597   TTTCTTACTCAACAA                TCAG CTGA CCGA                 TTTCTCGCTGTACCC  50 481
HER31_RS02500  505726 ..  505737 -  -2.2  -3.24747   TCTTGATATGAGCAA                GCCA GCGT TAGC                 TCAAGGCAAGCGTAA  44 402
        folX NONE
HER31_RS02480  502762 ..  502788 -  -5.8  -4.00042   GCTGCTAGCAAACAA         CTGCGCTGTG CTGTTGT CACAGCGCTA         ATGGATCAATAAAAA  63 49
HER31_RS02465  498989 ..  499013 - -14.4  -4.74453   TAACACAGCCAAAAA          CAAAGCCACC GTTAT GGTGGCTTTG          TTGTATCAGCAATAC 100 46
HER31_RS02345 NONE
HER31_RS02340 NONE
HER31_RS02335  491764 ..  491789 - -14.1   -3.5399   AGTATAGGCACACAA         TAAGGGCAGCC TAGT AGCTGCCCTTA          TTACATCTGCGGTGT 100 63
        pspF NONE
HER31_RS02265 NONE
HER31_RS02260 NONE
HER31_RS02255 NONE
HER31_RS02250 NONE
HER31_RS02245  473840 ..  473865 - -17.7  -3.87994   AGTTAGCGTTACAAA         CAAAGGCGACC GTTT GGTCGCCTTTG          TTGTAGCTGAAGCTT 100 459
HER31_RS02235  471030 ..  471053 - -15.3  -4.72846   CGACACAGCCAAAAA          CAGCCCCGC CAATGT GCGGGGCTG           TTTGATTTTAAGCTC 100 65
HER31_RS02225  469291 ..  469318 -   -20  -4.55287   TTCAGCCATACAAAA        CAGCCCTAGGAC GTGA GTCCTAGGGCTG         TTTTGCTTTAGCTTT 100 45
HER31_RS02215  466497 ..  466522 -  -8.3  -4.72486   TACAAAGCCTAAAAA         TGCCACATGCT TCCC AACAAGTGGCA          TTTTGTTATTCGCGC  89 48
HER31_RS02205  464658 ..  464680 -  -6.2  -2.62184   GCGGCGTTGATACCA           CTGCGGTAGC ACA GATAACGCAG           TTAATCTCTGCCAAC  50 333
HER31_RS02190  459726 ..  459739 -  -3.8  -2.79273   GTTGGCTAACAGAAG               TGGG GTTACT CCCA                GCCAGTGAGCGTTTC  45 17
        yghU  458788 ..  458817 - -15.8  -4.13654   TGCTTAAATGATAAA       GGCGCATTGGGA GGTTAA CCCCAATGCGCC        TTTGTACAATCGATT 100 48
HER31_RS02170  456698 ..  456733 -  -4.6  -2.71263   AAGGTGTTGCAACTA    GCTTGGGCGAGTTGGC TGCA GCCAACTCGTTAAATC     AATTACTTCTGCCAA  47 28
HER31_RS02165  455759 ..  455799 - -11.3  -3.75024   CGGTATGAGTAACAA CATCTCCAGCAAAGCACG GTTAGA CGCGCTTTGCCGGA-ACG  ACGCGAATCAGCATT  91 96
HER31_RS02160  454799 ..  454826 - -12.8   -5.1615   TGAATAGGTAAAAAA        TCAGTCAGCCTA AAAA TAGGCTGGCTGA         TTTATCATAGGGTTA 100 158
HER31_RS02155  453587 ..  453608 - -12.3  -3.09015   TTTATAGCGATGTAA           CCAACACCG GTTG CGGTGTCGG            CCAAGCGCAATCTGG  77 521
HER31_RS02145  452470 ..  452480 -  -6.8  -3.34344   TTACGGTGCAACTAA                 GACG CCA CGTC                 TGGCCCTAAGCATGT  61 11
HER31_RS02130 NONE
HER31_RS02125  446698 ..  446714 - -13.7  -6.25741   AAATAACAAAAAAAA              GGGTGGC AAT GCCACCC              CTATATCAATTATTT 100 35
HER31_RS02120  445532 ..  445548 -  -6.7  -2.85056   ATCGCCAACCTAAAT              TTTAATG CGT CATTAAA              TATGCTTGTTATGTT  56 109
HER31_RS02115  444548 ..  444569 - -12.3  -3.98282   CGTACAGGAATCAAA           TCCGAGCCC ATCA AGGCTCGGA            CTTTTTATTGCTAAT 100 56
HER31_RS02100 NONE
HER31_RS02095  441527 ..  441546 -  -6.4  -4.98857   AGCGAACGATAAAAA            CCGCTGAC GGAT ATCAGCGA             GTTTTCTGTGTAATA  81 90
HER31_RS02065 NONE
HER31_RS02060  434794 ..  434813 -  -6.4  -4.98857   AGCGAACGATAAAAA            CCGCTGAC GGAT ATCAGCGA             GTTTTCTGTGTAATA  81 62
HER31_RS02015 NONE
HER31_RS02010  422384 ..  422401 - -11.3  -4.39571   TTCATAAATTCAAAA             GCCAGCA TTGC TGCTGGC              TCTTCAGATATTAGT  93 36
HER31_RS02005  421541 ..  421557 -  -4.3  -3.68569   CGATTTAGGCAACAA              CGCCGGT TGG AGCGGCA              CTTTTCGATGATAAA  55 158
HER31_RS01975 NONE
HER31_RS01970  412418 ..  412453 - -13.9  -2.83343   ACATCGAGCATGACA    CGCCAACGGCTGGCG GTTTAA CGCCGGTCGCTGGCG     GCTCGGCCAGATCAG  86 44
HER31_RS01965  411407 ..  411427 -    -4  -3.01791   ATTTTGCTTCTAATA           GGC-A-GCCC ATT GGGCATTGCC           CTAATTTATGACTGA  47 31
HER31_RS01960  410240 ..  410272 -  -9.3  -3.64716   CGACCGTTCAAAATA      TCCAAATTTGAAAGC TTA GCTTGCAAATTTGCA      AGCCAGTGTTGGTTG  75 460
HER31_RS01955 NONE
HER31_RS01950  409324 ..  409343 -  -5.6  -2.50816   TGGGTATTTAGCAAT            TGGCCAGC CTAA ACTGGCCG             TGAAGAAAAGTGGTT  49 39
HER31_RS01945  408688 ..  408707 - -13.6  -4.87665   CTGCAGTTACAAAAA            GACCACCG CAAT CGGTGGTC             TTCTTGGTTAACTTC 100 62
HER31_RS01940  407964 ..  407983 - -12.2   -5.0133   GAGGTTCCCAAAAAA            GCTGAAGC CTTG GCTTCAGC             TTAACAACTCACGCT 100 47
HER31_RS01935  406281 ..  406304 - -13.9  -5.06414   TTCTCCTAATAAAAA          GCCCCAAGC GCACAG GCTTGGGGC           TTTTATCCATCAAAA 100 35
HER31_RS01930  405537 ..  405564 -    -5  -3.54424   TGTGATCTGTTGAAA        CTGGATTTGCAGT GCC ACTACAAA-CCAA        TGCGTTGTATTTATC  56 36
HER31_RS01925  404949 ..  404980 -  -3.6  -4.34345   CACACACCACTAAAA      CGAATCCCGCAGTA TAAA TCCAGCGGAATTTG       TTGGTGTTATTTGAT  62 42
HER31_RS01920  403847 ..  403875 -  -4.5   -4.0492   GAACGGCCACACAAA        GCCAACAATGG GCGACCA CCGTTGATGGC        CGCTTTCCCTCTAGT  61 105
HER31_RS01880  393746 ..  393756 -  -4.6  -4.09685   CTTCAGCTTTGAAAA                 GCCC TTC GAGC                 CTGCCCTTGCCCTCA  61 198
HER31_RS01870  391565 ..  391578 -  -3.9  -2.50109   AGATATCAAGAAATG               TGTAA GAAG TTACA                AAAAACAGAACAATA  42 408
HER31_RS01810  378045 ..  378066 -  -8.7  -4.44667   GGTGCGAAGAATAAA           GAAGGGAGC GAGT GCTCCCTTA            ACAATTGAGCTATTA  87 38
HER31_RS01805  377168 ..  377205 -  -9.1  -2.84276   ATCGTTAATCAACTA   CCGC-AGAGCAGGGATGG AGC CGATTCCCGCTCCAGCGG   ATTTTATCGCCACTC  62 121
HER31_RS01755  366120 ..  366142 - -12.7  -4.45261   CAAATAAACCTAAAA           GCGCAGCCC AGTAA GAGCTGCGC           TAACCGCTAAGGTTA 100 38
        fghA  365197 ..  365227 -  -8.3  -3.78529   ACAACTATCAAAAGA       GTGTCGACGCC AAAAGTAGA GGGGTCGACAC       CTAGATATTGTGTTA  75 52
HER31_RS01745  364246 ..  364260 -  -8.5  -5.77988   ACAGACATAAAAAAA               CCCGC ACAAG GCGGG               CTTTTTCAATCGGTT 100 73
HER31_RS01700 NONE
HER31_RS01695 NONE
HER31_RS01690 NONE
HER31_RS01685  350103 ..  350114 -  -3.6  -2.53759   AACAGTGTTAACTTA                CCGC TAGA GCAG                 CGCTGCAATTTGCTC  42 17
HER31_RS01680 NONE
HER31_RS01675 NONE
        rdgB NONE
        hemW  347099 ..  347109 -  -5.4  -2.96405   TCCATGCAAAAATAT                 TGTC GTC GACA                 TTGTTACATGGAGTG  51 98
HER31_RS01660  344849 ..  344868 - -13.6  -3.87952   TAATAATAAAATCAA            GGGAGACC ATCT GGTCTCCC             TTTTTCTTGGCTGTG 100 386
        mutY  338775 ..  338793 - -10.2  -3.60475   AAGGGGGATTCCAAA             GGGGGCGA AGC TCCCCCCC             CCCTAATGCATGCAA  78 272
HER31_RS01620  338077 ..  338102 -  -8.4   -6.4275   CAAAAACAAAAAAAA         CACGAG-TAGG GCTAG CCTAACTCGTG         TTTTTTGATGAACAA 100 46
        eutS  337114 ..  337124 -    -4  -3.40775   ATCGTCATCGAAATA                 CTAA TTT TTAG                 TCATGGCACAACAGC  50 15
HER31_RS01605  336622 ..  336635 -  -4.5  -2.82623   GTTTTTTCATAATGA               CCGTCC TTG GG-CGG               TGACCGTACTTAGTC  47 35
        eutQ NONE
        eutT NONE
HER31_RS01590 NONE
        eutM NONE
        eutM NONE
HER31_RS01575 NONE
HER31_RS01570 NONE
        eutJ NONE
HER31_RS01560 NONE
HER31_RS01555 NONE
HER31_RS01550 NONE
        eutC NONE
        eutL NONE
HER31_RS01535 NONE
HER31_RS01530  323357 ..  323371 -  -5.7  -3.62539   TATTAATTAAATTAA               CCAGT GAAGT ACTGG               CGCTAAACTTTGCCT  59 28
         eat  321808 ..  321828 -  -9.7  -2.56164   TGCTCAATCATGAAG            CGGCTGACA CCG TGCCAGCCA            TGCAGTTACCAGCGT  68 45
HER31_RS01520  320988 ..  321017 -  -5.8  -5.52909   GAAGACCGAAAAAAA       TAAAGACTCAGG GATTAT CCTAAGTCTTTT        TACTGATGATTGGTT  93 64
HER31_RS01515  320681 ..  320715 -  -5.9  -3.61894   AATGTCCGGCAACAA    CTTT-GATTTACTGGC TAAT GCCAATCAATCGAAAG     ATGGTGCCTCGTCCC  59 27
HER31_RS01510  320563 ..  320575 -  -2.7  -3.29211   TAAGTCGAAACTCAA                CACTT TAA AAATG                GTGCCTCGTCCCGGA  46 24
HER31_RS01505  320457 ..  320469 -  -2.7  -3.29211   TAAGTCGAAACTTAA                CACTT TAA AAATG                GTGCCTCGTCCCGGA  46 24
HER31_RS01500  320331 ..  320352 - -13.1  -5.04601   GCTAGAAATGAAAAA           GGCTCAATC CGAA GATTGAGCC            TTATCAATATGGTGC 100 35
HER31_RS01495  320094 ..  320115 - -13.1  -5.04601   GCTAGAAATGAAAAA           GGCTCAATC CGAA GATTGAGCC            TTATCAATATGGTGC 100 35
        sigZ  318237 ..  318251 -  -2.8  -3.53444   TCACGTCGCCGCAAA               GCAG TGTTGAT CTGC               GCCGTTTATCGAAAC  49 425
HER31_RS01480  317047 ..  317063 -  -6.6  -3.01905   ATGCTCTATATAAAG              GCAGAT GGGGG ATCTGC              AAGATGATAAAGAGG  58 257
HER31_RS01475  315078 ..  315094 - -10.8  -5.56264   TGCAAATACAAAAAA              CCGGCC ACTAG GGCCGG              TTTTTTTAGTTGGTG 100 54
HER31_RS01465 NONE
HER31_RS01460  311180 ..  311192 -  -7.7  -3.14931   TGGATCTGGCAGTAA                CCATC AGC GATGG                TCAAGTGAGCGTCAG  59 117
HER31_RS01450  309670 ..  309687 - -12.7  -5.29782   CACAGCCATAAAAAA             GGGACGC CGCA GCGTCCC              TTTGTTCCAATCTGT 100 55
HER31_RS01410 NONE
HER31_RS01405 NONE
HER31_RS01400  301594 ..  301629 - -10.4  -4.63218   GGGCTGCCAACAAAA    CAAAGCCAGTCGAAAC AAAC GTCACGACCGGCTTAG     TTATTACAGTCAATT  91 54
HER31_RS01360 NONE
HER31_RS01350  287954 ..  287971 - -12.7  -3.63817   CACAGCCTAAAAAAG             GCCTCGC AATC GCGAGGC              TTTTTTGTTGCTAAT  95 49
HER31_RS01340  286008 ..  286018 -  -2.4  -4.24285   TACAGATGGAACAAA                 CGCC AAT GGCT                 TTTTCGTTGTGGTTC  57 478
HER31_RS01330 NONE
HER31_RS01310 NONE
HER31_RS01305  278696 ..  278715 -  -4.4  -4.15044   TTCTGGTGGAACAAA            TC-GTTAAC TAG GTTAACAGA            TTTCAATCACTTGGT  61 503
HER31_RS01300  277360 ..  277382 - -13.6  -4.09685   CCCTAGTCGTGAAAA           CAAACTCACA CAG TGTGAGTTTG           TGAACAACTAAGTTA 100 38
HER31_RS01290  274355 ..  274371 -  -9.4  -5.65177   ACAGCCATAAAAAAA              CCGACC ATGTA GGTCGG              TTTATTGAAGCCAAT 100 55
HER31_RS01285  273682 ..  273697 -  -8.2  -3.40899   AACCGTCGACTACAA              CGCGCC GAAC AGCGCG               TCTAAACTTAGGCCG  65 90
HER31_RS01280  273307 ..  273322 - -11.8  -4.36206   ATAACTCATAACAAA              CGCGCC CATA GGCGCG               GTTGTTGTTGGGGAT  95 65
HER31_RS01275  272615 ..  272630 - -11.8  -5.47159   TGGTAACACAAAAAA              CGCGCC CGTA GGCGCG               TTTGGTCAATAGGGT 100 48
HER31_RS01270 NONE
        rpiA  269598 ..  269617 -  -2.8  -3.57144   GCTGTTACGGCTAAA            GCGCTAAC CGAG ATCAACGC             TTTGTGCCTCGGCCG  50 42
HER31_RS01260  268973 ..  268991 -  -7.4  -5.95166   CTTAACCAAAAAAAA             TCGACCCC GCA AGGATCGA             TTTTTTGTGAAGTCG 100 55
HER31_RS01255 NONE
HER31_RS01250  266711 ..  266734 -  -8.1  -4.51174   CTAGCATAACCAAAA          GCGGCGCTA TGTAAG TAGCGCAGC           TCGCAATTTCTGGCT  82 75
        serA  265386 ..  265409 - -19.6  -5.00642   TAATCGATATAAAAA          CGGGGGGCTC AATT GAGCCCCCCG           TTTTTATAAATGATA 100 53
HER31_RS01235  263555 ..  263574 - -13.6  -3.66178   GTTGCTAACCCGAAA            TGCCGAGC GTTT GCTCGGCA             TTTTGGTAACTGGTG 100 55
HER31_RS01210  258188 ..  258209 - -15.9  -4.10552   CGCTAGGAAACCAAA           CAGCCCGCT AATT AGCGGGCTG            TTGCAGTAGTTAGTC 100 59
HER31_RS01200  255077 ..  255099 -  -5.6  -4.03234   GTGTTGTTACATAAA           CGTTAACCTA GCG TAAGTTTACG           TAAAGGTAAACTAGA  65 213
HER31_RS01195 NONE
HER31_RS01190 NONE
HER31_RS01185 NONE
HER31_RS01180 NONE
HER31_RS01175 NONE
HER31_RS01170 NONE
HER31_RS01155 NONE
HER31_RS01150  245331 ..  245345 -  -5.7  -2.79671   AGCTCAACGTCAAAT               CCAAG GGGGG CTTGG               CGCGCTTACAAAAAC  51 459
HER31_RS01140  244059 ..  244075 -  -2.1  -4.17657   TACTACAGCTTAAAA              GCTCGGG CAA CTGGAGC              AGCATCTACAGCCTT  57 401
HER31_RS01130  241994 ..  242004 -  -2.4  -3.57561   GCTCAATTGTTCAAA                 CCCG CGA CTGG                 CAATCCGGTTACTTT  49 152
HER31_RS01125  240991 ..  241015 -  -7.9   -2.7663   TTAATAATAATGAAG         GCGGTGCCCA ACCCAA TGGGCA-CGC          TGGCGGTTGGCAGTG  60 42
         add  239784 ..  239809 -  -9.8  -3.56821   AGGATAGCGGCCAAA         GCGACAGC-CA TTGGT TGCGCTGTCGC         TTGAGCATACAACCC  75 49
HER31_RS01065  221924 ..  221963 -  -8.7  -3.91716   CTATTGCTGAAACAA  CAACACCGCATCAATCA TCTCAG CGAGTAATGCGGTGTTA   TTTTTGCTGTTCGAA  76 57
HER31_RS00985  205327 ..  205351 -  -7.1  -4.09656   CTCAAAATAGAAGAA          CGCGGGC AGGATAGCAGA GCCCGCG          TGATGAGGATATTGT  72 41
HER31_RS00980 NONE
HER31_RS00975  204098 ..  204140 -  -9.4  -2.92094   TGCGACATAAAACAG TTTGTTAAGCTCAGAC TACCTTGATGG GTCTGAGCTTAACAAG AGCAACTCTGGCATC  70 39
HER31_RS00970  202664 ..  202676 -  -4.7  -3.11303   GCAACAGACAAAGTA                GCCTC AAC GTGGC                GCTTGATGCTGAGAA  49 61
HER31_RS00965  200626 ..  200651 - -11.9  -4.17002   TATCAAATCAAACAA         GGGCTACCATC GATT AATGGCAGCCC          TGAGTCTCAGTTCGA  95 58
HER31_RS00960  199494 ..  199517 -  -3.2  -5.09895   GAGCTAGCTAAAAAA          TGCGAGTTTAG CGG CAAAACT-GCA          AGCCGTCAGTGCACC  76 359
        vanZ NONE
HER31_RS00945  197361 ..  197377 -  -6.5  -4.56597   GGTTGGTTTTAAAAA              TGGCACC GAC GGCACCA              CCGGCATTGCGATAG  76 511
HER31_RS00935  196048 ..  196067 -   -15  -4.08144   GCCATTAACGACAAA            GGGCAGCC ACTA GGCTGCCC             TTTTTTGATCGTAAT 100 49
        xseB NONE
        ispA  190932 ..  190956 -  -2.7  -3.61774   GACAACAGCGGGAAA          TCGGAAAGGGC GTT GCTCATTTCGA          TAGGGTTCGCATACT  50 48
         dxs  189030 ..  189057 -   -17  -5.08169   ACACAGCCCAAAAAA        GGCCGCCCCAAG TATG CTCAGGGCGGCC         TTTTGCTGTTTCAGC 100 48
HER31_RS00895  186808 ..  186832 - -12.9  -4.96848   GGCTGGATATAAAAA          TCCCCCGAG TGTTGAG CTCGGGGGA          TTTTTTTGGCTGTTT 100 350
HER31_RS00820 NONE
HER31_RS00815 NONE
HER31_RS00810 NONE
HER31_RS00805 NONE
        yedF  170385 ..  170404 -  -6.4  -4.94992   CTAAACCTACAAAAA            TCCCCAGT ATTA ACCGAGGA             TAGTTTAGTGTTTTA  81 73
        mutS  165713 ..  165739 - -10.8  -4.85599   TCCATTTTAGAAAAA         CGCCGCTGGC TTGTTTG GTCAGCGGCG         TTTTTATCTTGGTGT  95 75
        barA NONE
HER31_RS00710  148421 ..  148442 - -15.9  -5.45726   CACAGCCTAAAAAAA           CGCCGTGGT TTAA ACCACGGCG            TTGTTGTAACAAATC 100 65
HER31_RS00695  145819 ..  145836 - -12.7  -4.13654   TTGCGAAATGACAAA             GGGCCTC AAGA GAGGCCC              TTAAAGTTTACTGCG 100 61
        raiA  144362 ..  144380 - -14.6   -5.4505   CTCCGTAACAAAAAA             GCCTCCCA CTG TGGGAGGC             TTTCGATGATTGGGT 100 218
HER31_RS00680  142455 ..  142471 -  -6.6  -2.64616   GGGCTAGGGACAGGA              GAGTAC CCAAT GTACTC              TCCTGAGGGCGGAGA  55 45
HER31_RS00675  140154 ..  140164 -  -6.8  -3.28924   TACTGTTTCCTAGAA                 GTGG ATG CCAC                 GCAGCATGGCTGCAA  61 9
HER31_RS00670 NONE
HER31_RS00665  138559 ..  138586 - -11.2  -2.85813   ACGCCAACAACATCA        TTCTCGCCGGCG ATTC CGCCGGCGGTAA         TCTGGTAATGACTAC  71 490
        ccsA  128322 ..  128332 -  -8.2  -2.95539   GAACGGTAATGAAAC                 GGCC TAT GGCC                 CCCGCTGTCAAGCAA  61 59
HER31_RS00595  126964 ..  126984 - -13.3  -5.19251   CAATATCAACAAAAA            CGGCAACCA TTG TGGCTGCCG            TTTTTCGTTACTCGA 100 58
HER31_RS00580  125653 ..  125669 -  -5.1  -4.57837   ATATCGTGCCAAAAA              GGCAG GGCGCAA CTGCC              TGAAGTTGGCGAGTA  71 55
HER31_RS00560  119820 ..  119834 -  -8.5  -5.77632   AAAATTATAAAAAAA               CCCGC ACAAG GCGGG               TTTATTTTGCAAAGC 100 45
HER31_RS00555  118530 ..  118557 - -15.7  -2.93817   AACGCTTAAGAAGCA        CTAGGTCGACC GCAGAA GGTCGACCTAG         TTTATTGATTTTATT  93 44
HER31_RS00550 NONE
HER31_RS00545 NONE
        rsmE  116509 ..  116522 -  -2.3  -3.17075   GTTCTCCTAACCTAA               GTCGC CGAA GCGAA                CCTGTAACGCGGTAA  44 3
        gshB NONE
HER31_RS00530  114872 ..  114889 -  -4.1  -3.78597   ATGCATCAACTTAAA             GATATGG GGAT CCAGATC              GCCATTGACGATTTT  54 378
HER31_RS00520  111467 ..  111486 -    -5  -3.02471   GGCGCATTATAGAGA            GATTG-CCG ATT CGGTCAACC            ACGAAAGCTGTTTTA  51 38
HER31_RS00515 NONE
HER31_RS00510 NONE
HER31_RS00505 NONE
HER31_RS00500  110991 ..  111016 - -15.5  -4.87328   CACAGAAACAGAAAA         CCCCTTGGCTC ATAA GAACCAAGGGG          TTTAAATCTGGTGCA 100 34
HER31_RS00495  109225 ..  109237 -  -3.4  -2.92192   GGGCAGGCAATGAGA                GCAA CAGTT TTGC                CAGCTTGGTACAATA  44 43
HER31_RS00490  108168 ..  108183 - -10.4  -4.82667   GGATGATATGAAAAA              GGCTGC GATT GCAGCC               TTTTTTGATTCTAGC  91 372
HER31_RS00480  106742 ..  106763 - -10.9  -3.09004   CCAGTTTGAAAACCA           GCCCAGAAC TGCA ATTCTGGGC            TCTGTGTGCTTGTTA  76 38
HER31_RS00425 NONE
HER31_RS00420   94404 ..   94421 - -11.3  -3.88097   CGACATAACGAACAA             GCCAGTC ATAT GACTGGC              TTTTTGCTTTTCTAA  91 44
        rpsT   86450 ..   86465 - -10.4  -5.64274   TCAGGCATAAAAAAA              CCGACC CAAG GGTCGG               TTTTTAATTCTGTGC 100 54
HER31_RS00380   84890 ..   84921 - -17.4  -3.25652   TCTATTTAACGAACA      CTAAACGCCACAGC ATTT GCTGTGGCGTTTTG       GTTTATTGGTTAGTT 100 46
         tal   80953 ..   80978 - -14.1  -3.48276   CCCTTCCCCAGACAA         TTAACCCGAGC AAAG GCTCGGGCTAA          ATAATAGTTATTTCA 100 44
         pgi NONE
HER31_RS00355   78963 ..   78981 - -10.3  -5.60993   TTTTGCATAAAAAAA             CACCTCG GCGAG CGAGGTG             TTTTTATGTTTGGGG 100 45
HER31_RS00350 NONE
HER31_RS00345   77215 ..   77234 - -13.6  -5.27335   TGCGCCAAATAAAAA            CGTCAGCC CTAG GGCTGACG             TTTTTTGTTGTTACT 100 53
        nrfE NONE
HER31_RS00250 NONE
HER31_RS00245   56128 ..   56146 - -13.2  -5.38958   AGGCAGAAACAAAAA             CAGACCGA ATC TCGGTCTG             TTTGCAATTGTTACT 100 44
HER31_RS00225   50886 ..   50898 -  -7.7  -2.94045   TTACGTGAATAATGA                CCCAA CTC TTGGG                CTGTATGGAGCGTGG  61 282
HER31_RS00220   50258 ..   50278 -    -9  -3.05384   CTCCTTGTTACTGAA            TGAGGGGA GGGCT CCCCCTCA            TTTATTTCCGTCAGT  68 40
HER31_RS00215 NONE
HER31_RS00210   47117 ..   47134 -  -3.3   -3.4678   ATGTTCACAGTAGAA             CCGAGGC TGTC GCCTTAG              CATTTATTAACTAAC  50 79
HER31_RS00190   44331 ..   44342 -  -4.4  -3.39216   CTTCGATGCAAAAAT                TCTC ACAA GAGA                 TCGGTTATTAGCGTC  52 33
HER31_RS00170   41143 ..   41176 -  -3.1  -3.84246   TGGTTAATCAGGAAA     CCGTAGTAGAGGGGAT TGA ATCAAC-CTACGACGG     TTTCTTAGGTTTATT  54 167
HER31_RS00160   39470 ..   39500 -  -7.5  -2.62668   GATGATGCAAGGAAT       GGCCCACATCGCA ATTGG CGCGATGTGGGTG       TATGTCGCTGCTGTT  55 84
HER31_RS00150 NONE
HER31_RS00145 NONE
HER31_RS00140   36349 ..   36370 -  -7.2  -3.30635   TAAACGGTCGCATAA           CGGCTCCA TAAATC TGGGGCCG            CTACAGTAGGAAAAC  63 410
        rluA   35557 ..   35575 - -10.2  -3.60098   AGTGGGGATTCCAAA             GGGGGCGA AGC TCCCCCCC             CTCATGCATACAAGA  78 137
HER31_RS00130   31157 ..   31174 - -12.7  -5.24129   TGCCGTGACAAAAAA             CGCCAGC AATT GCTGGCG              TTTCTAAATATTAAC 100 60
        asnC   29030 ..   29043 -  -5.3  -3.57263   ACTTGGATCCGTAAA               GAAGT AGCC ACTTC                ACCAGGGTTTCGAGC  56 488
        arcA   26590 ..   26607 - -12.7  -5.65177   ACAGTGATAAAAAAA             GACCGCC ATTT GGCGGTC              TTTTTTATTGGCTTT 100 44
HER31_RS00100   24918 ..   24933 - -11.8  -4.77157   GCAATGTACGAAAAA              GGGGCC AGTA GGCCCC               CTTTAGAGTTACTCA 100 50
HER31_RS00095   23799 ..   23820 - -15.1  -3.61178   TGCAGTTAGCTCAAA           GCCCGCCCC GAAA GGAGCGGGC            TTTTGTCATTTATGA 100 120
HER31_RS00055   12488 ..   12503 - -10.4   -5.2189   TTAAGCATTAAAAAA              GCCTCC GTAT GGAGGC               TTTTTTGCTGAGTAA 100 52
HER31_RS00035    8375 ..    8398 - -14.6  -3.58905   AGTGCGTAGATACAA          CAAAGCCGCC CGGA GGCGGCTCTG           TTTACGCTGTTATTG 100 42
HER31_RS00030    6997 ..    7013 - -15.1  -3.60098   AGGGGGGATTCCAAA              GGGGGCG AAG CGCCCCC              TTAATGCATACAAGA 100 139
         ppa    6114 ..    6143 - -15.9  -4.93365   CCTCAGAATGAAAAA       CAGCGCTACCAAT TGAA ATTAGTAGCGCTG        CAGCGACATTAACCG 100 67
