locus-tag	class	description
ABE41_RS00025	COG0517	IMP dehydrogenase activity
ABE41_RS00025	COG0516	GMP reductase activity
ABE41_RS00035	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
ABE41_RS00040	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
ABE41_RS00045	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
ABE41_RS00055	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
ABE41_RS00060	COG2011	ABC-type metal ion transport system permease component
ABE41_RS00065	COG1464	Belongs to the NlpA lipoprotein family
ABE41_RS00070	COG1428	Deoxynucleoside kinase
ABE41_RS00075	COG1428	Deoxynucleoside kinase
ABE41_RS00080	COG1335	isochorismatase
ABE41_RS00085	COG0590	tRNA wobble adenosine to inosine editing
ABE41_RS00095	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
ABE41_RS00100	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
ABE41_RS00105	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
ABE41_RS00140	COG1982	Orn Lys Arg decarboxylase major
ABE41_RS00145	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
ABE41_RS00150	COG3870	Protein conserved in bacteria
ABE41_RS00155	COG1728	Protein conserved in bacteria
ABE41_RS00160	COG0470	DNA polymerase III
ABE41_RS00165	COG1774	PSP1 C-terminal conserved region
ABE41_RS00170	COG4467	Involved in initiation control of chromosome replication
ABE41_RS00175	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
ABE41_RS00180	COG2827	Endonuclease containing a URI domain
ABE41_RS00185	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
ABE41_RS00190	COG2002	toxin-antitoxin pair type II binding
ABE41_RS00200	COG0084	hydrolase, TatD family'
ABE41_RS00205	COG3584	3D domain protein
ABE41_RS00205	COG3583	domain protein
ABE41_RS00215	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
ABE41_RS00225	COG4466	Protein conserved in bacteria
ABE41_RS00235	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
ABE41_RS00240	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
ABE41_RS00245	COG0251	oxidation-reduction process
ABE41_RS00250	COG2088	sporulation resulting in formation of a cellular spore
ABE41_RS00255	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
ABE41_RS00270	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
ABE41_RS00275	COG0193	aminoacyl-tRNA hydrolase activity
ABE41_RS00285	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
ABE41_RS00290	COG2002	toxin-antitoxin pair type II binding
ABE41_RS00300	COG2244	polysaccharide biosynthetic process
ABE41_RS00305	COG3956	TIGRFAM MazG family protein
ABE41_RS00315	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
ABE41_RS00335	COG1098	S1 RNA binding domain
ABE41_RS00345	COG2208	phosphoserine phosphatase activity
ABE41_RS00350	COG2304	oxidoreductase activity
ABE41_RS00355	COG0515	serine threonine protein kinase
ABE41_RS00360	COG0037	tRNA processing
ABE41_RS00365	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
ABE41_RS00370	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ABE41_RS00375	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
ABE41_RS00380	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
ABE41_RS00385	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
ABE41_RS00390	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
ABE41_RS00395	COG0512	Glutamine amidotransferase of anthranilate synthase
ABE41_RS00400	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
ABE41_RS00405	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
ABE41_RS00410	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
ABE41_RS00415	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
ABE41_RS00420	COG1396	sequence-specific DNA binding
ABE41_RS00425	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ABE41_RS00430	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ABE41_RS00435	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
ABE41_RS00470	COG3880	PFAM UvrB UvrC protein
ABE41_RS00475	COG3869	Catalyzes the specific phosphorylation of arginine residues in
ABE41_RS00480	COG0542	response to heat
ABE41_RS00485	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
ABE41_RS00490	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
ABE41_RS00495	COG4956	integral membrane protein (PIN domain superfamily)
ABE41_RS00500	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
ABE41_RS00505	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
ABE41_RS00510	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ABE41_RS00515	COG1045	serine acetyltransferase
ABE41_RS00520	COG0215	cysteine-tRNA ligase activity
ABE41_RS00530	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ABE41_RS00535	COG3688	RNA-binding protein containing a PIN domain
ABE41_RS00545	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
ABE41_RS00550	COG0250	Participates in transcription elongation, termination and antitermination
ABE41_RS00555	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
ABE41_RS00560	COG0081	regulation of translation
ABE41_RS00565	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
ABE41_RS00570	COG0222	ribosome binding
ABE41_RS00575	COG2813	Specifically methylates the guanine in position
ABE41_RS00580	COG0085	RNA polymerase activity
ABE41_RS00585	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
ABE41_RS00590	COG1358	cellular component organization or biogenesis
ABE41_RS00595	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
ABE41_RS00610	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
ABE41_RS00615	COG0051	transcription antitermination factor activity, RNA binding
ABE41_RS00620	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
ABE41_RS00625	COG0088	Forms part of the polypeptide exit tunnel
ABE41_RS00630	COG0089	rRNA binding
ABE41_RS00635	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
ABE41_RS00640	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
ABE41_RS00645	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
ABE41_RS00650	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
ABE41_RS00655	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
ABE41_RS00660	COG0255	Belongs to the universal ribosomal protein uL29 family
ABE41_RS00665	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
ABE41_RS00670	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
ABE41_RS00675	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
ABE41_RS00680	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
ABE41_RS00685	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
ABE41_RS00690	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
ABE41_RS00700	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
ABE41_RS00705	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
ABE41_RS00710	COG1841	ribosomal large subunit assembly
ABE41_RS00715	COG0200	Binds to the 23S rRNA
ABE41_RS00720	COG0201	protein transport
ABE41_RS00730	COG0024	Methionine aminopeptidase
ABE41_RS00740	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
ABE41_RS00745	COG0257	Belongs to the bacterial ribosomal protein bL36 family
ABE41_RS00750	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
ABE41_RS00760	COG0202	RNA polymerase activity
ABE41_RS00780	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
ABE41_RS00790	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
ABE41_RS00795	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
ABE41_RS00805	COG0860	N-Acetylmuramoyl-L-alanine amidase
ABE41_RS00810	COG0489	protein tyrosine kinase activity
ABE41_RS00820	COG2194	sulfuric ester hydrolase activity
ABE41_RS00825	COG0726	polysaccharide deacetylase
ABE41_RS00900	COG1595	DNA-templated transcription, initiation
ABE41_RS00905	COG5662	AntiSigma factor
ABE41_RS00910	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
ABE41_RS00915	COG4856	YbbR-like protein
ABE41_RS00920	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ABE41_RS00930	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
ABE41_RS00950	COG3871	stress protein (general stress protein 26)
ABE41_RS00965	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABE41_RS00990	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ABE41_RS00990	COG4499	WXG100 protein secretion system (Wss), protein YukC
ABE41_RS01005	COG1309	transcriptional regulator
ABE41_RS01010	COG1595	DNA-templated transcription, initiation
ABE41_RS01020	COG0791	NLP P60 protein
ABE41_RS01020	COG1388	LysM domain
ABE41_RS01025	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ABE41_RS01035	COG4294	response to UV
ABE41_RS01040	COG0300	oxidoreductase activity
ABE41_RS01065	COG0346	lactoylglutathione lyase activity
ABE41_RS01075	COG0519	Catalyzes the synthesis of GMP from XMP
ABE41_RS01080	COG1376	ErfK ybiS ycfS ynhG family protein
ABE41_RS01110	COG0598	Magnesium transport protein CorA
ABE41_RS01115	COG1686	Belongs to the peptidase S11 family
ABE41_RS01120	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
ABE41_RS01120	COG2199	diguanylate cyclase activity
ABE41_RS01150	COG0705	Rhomboid family
ABE41_RS01155	COG0736	holo-[acyl-carrier-protein] synthase activity
ABE41_RS01160	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
ABE41_RS01165	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
ABE41_RS01170	COG0864	Transcriptional regulator
ABE41_RS01175	COG2337	Toxic component of a toxin-antitoxin (TA) module
ABE41_RS01180	COG1366	Belongs to the anti-sigma-factor antagonist family
ABE41_RS01185	COG1366	Belongs to the anti-sigma-factor antagonist family
ABE41_RS01190	COG2172	sigma factor antagonist activity
ABE41_RS01195	COG2208	phosphoserine phosphatase activity
ABE41_RS01200	COG1366	Belongs to the anti-sigma-factor antagonist family
ABE41_RS01205	COG2172	sigma factor antagonist activity
ABE41_RS01210	COG1191	sigma factor activity
ABE41_RS01215	COG2208	phosphoserine phosphatase activity
ABE41_RS01220	COG2183	response to ionizing radiation
ABE41_RS01225	COG3091	SprT-like family
ABE41_RS01315	COG4843	Uncharacterized protein conserved in bacteria (DUF2179)
ABE41_RS01325	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
ABE41_RS01330	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
ABE41_RS01335	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
ABE41_RS01345	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
ABE41_RS01350	COG0047	phosphoribosylformylglycinamidine synthase activity
ABE41_RS01360	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
ABE41_RS01365	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
ABE41_RS01370	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
ABE41_RS01380	COG0151	Belongs to the GarS family
ABE41_RS01390	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
ABE41_RS01395	COG1470	cell adhesion involved in biofilm formation
ABE41_RS01400	COG4496	protein, YerC YecD
ABE41_RS01405	COG2801	Transposase and inactivated derivatives
ABE41_RS01415	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
ABE41_RS01435	COG0210	DNA helicase
ABE41_RS01445	COG4851	CamS sex pheromone cAM373 precursor
ABE41_RS01450	COG1012	belongs to the aldehyde dehydrogenase family
ABE41_RS01475	COG0154	amidase activity
ABE41_RS01480	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ABE41_RS01485	COG2031	fatty acid transporter
ABE41_RS01490	COG1309	transcriptional regulator
ABE41_RS01495	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ABE41_RS01505	COG0444	Belongs to the ABC transporter superfamily
ABE41_RS01540	COG1597	lipid kinase activity
ABE41_RS01545	COG2226	methyltransferase
ABE41_RS01550	COG1404	Belongs to the peptidase S8 family
ABE41_RS01555	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
ABE41_RS01565	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ABE41_RS01580	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
ABE41_RS01590	COG0604	alcohol dehydrogenase
ABE41_RS01595	COG2133	pyrroloquinoline quinone binding
ABE41_RS01625	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABE41_RS01650	COG1131	(ABC) transporter
ABE41_RS01695	COG3540	Alkaline phosphatase
ABE41_RS01700	COG1988	membrane-bound metal-dependent
ABE41_RS01705	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
ABE41_RS01710	COG1607	acyl-coa hydrolase
ABE41_RS01715	COG2832	Protein of unknown function (DUF454)
ABE41_RS01725	COG1607	acyl-coa hydrolase
ABE41_RS01730	COG0583	DNA-binding transcription factor activity
ABE41_RS01745	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
ABE41_RS01760	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ABE41_RS01790	COG0514	ATP-dependent DNA helicase (RecQ)
ABE41_RS01795	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
ABE41_RS01800	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
ABE41_RS01805	COG2107	Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2)
ABE41_RS01830	COG4915	5-bromo-4-chloroindolyl phosphate hydrolysis protein
ABE41_RS01835	COG3853	Toxic anion resistance protein (TelA)
ABE41_RS01840	COG1114	Component of the transport system for branched-chain amino acids
ABE41_RS01850	COG1376	ErfK ybiS ycfS ynhG family protein
ABE41_RS01860	COG0494	nUDIX hydrolase
ABE41_RS01865	COG1595	DNA-templated transcription, initiation
ABE41_RS01900	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABE41_RS01905	COG2814	Major facilitator Superfamily
ABE41_RS01915	COG1366	Belongs to the anti-sigma-factor antagonist family
ABE41_RS01920	COG1876	peptidase activity
ABE41_RS01925	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ABE41_RS01950	COG1131	(ABC) transporter
ABE41_RS01965	COG1595	DNA-templated transcription, initiation
ABE41_RS01975	COG1609	Transcriptional regulator
ABE41_RS01980	COG2966	Psort location CytoplasmicMembrane, score
ABE41_RS01990	COG1115	amino acid carrier protein
ABE41_RS02000	COG1132	(ABC) transporter
ABE41_RS02005	COG1132	(ABC) transporter
ABE41_RS02030	COG1304	FMN binding
ABE41_RS02035	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ABE41_RS02040	COG0488	(ABC) transporter
ABE41_RS02045	COG0488	(ABC) transporter
ABE41_RS02060	COG0693	protein deglycase activity
ABE41_RS02065	COG1823	symporter activity
ABE41_RS02075	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
ABE41_RS02085	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
ABE41_RS02100	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
ABE41_RS02105	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
ABE41_RS02115	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
ABE41_RS02120	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
ABE41_RS02125	COG0351	phosphomethylpyrimidine kinase
ABE41_RS02130	COG1263	PTS System
ABE41_RS02130	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ABE41_RS02135	COG0366	Alpha amylase catalytic
ABE41_RS02140	COG2188	Transcriptional regulator
ABE41_RS02150	COG1757	Na H antiporter
ABE41_RS02155	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ABE41_RS02155	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ABE41_RS02155	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
ABE41_RS02160	COG1105	Belongs to the carbohydrate kinase PfkB family
ABE41_RS02165	COG1349	DNA-binding transcription factor activity
ABE41_RS02170	COG2746	aminoglycoside 3-N-acetyltransferase activity
ABE41_RS02235	COG0488	(ABC) transporter
ABE41_RS02240	COG0517	IMP dehydrogenase activity
ABE41_RS02300	COG0432	Pfam Uncharacterised protein family UPF0047
ABE41_RS02310	COG0559	Belongs to the binding-protein-dependent transport system permease family
ABE41_RS02330	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ABE41_RS02350	COG2261	transglycosylase associated protein
ABE41_RS02355	COG1295	ribonuclease BN
ABE41_RS02360	COG0586	Pfam SNARE associated Golgi protein
ABE41_RS02370	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ABE41_RS02375	COG0477	Major facilitator Superfamily
ABE41_RS02390	COG1733	regulation of RNA biosynthetic process
ABE41_RS02395	COG0535	radical SAM domain protein
ABE41_RS02415	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
ABE41_RS02420	COG0110	maltose O-acetyltransferase activity
ABE41_RS02435	COG1090	epimerase
ABE41_RS02440	COG2137	regulation of response to DNA damage stimulus
ABE41_RS02465	COG1988	membrane-bound metal-dependent
ABE41_RS02475	COG1194	a g-specific adenine glycosylase
ABE41_RS02480	COG1028	Short-chain dehydrogenase reductase Sdr
ABE41_RS02495	COG3557	Belongs to the UPF0374 family
ABE41_RS02500	COG1132	(ABC) transporter
ABE41_RS02505	COG0444	Belongs to the ABC transporter superfamily
ABE41_RS02510	COG4608	Belongs to the ABC transporter superfamily
ABE41_RS02515	COG0747	negative chemotaxis
ABE41_RS02520	COG0601	transmembrane transport
ABE41_RS02525	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABE41_RS02535	COG4129	membrane
ABE41_RS02540	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
ABE41_RS02550	COG4555	ABC transporter
ABE41_RS02575	COG0640	Transcriptional regulator
ABE41_RS02580	COG0431	NADPH-dependent FMN reductase
ABE41_RS02590	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
ABE41_RS02615	COG0735	belongs to the Fur family
ABE41_RS02645	COG0626	cystathionine gamma-synthase activity
ABE41_RS02650	COG1113	amino acid transport
ABE41_RS02665	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
ABE41_RS02670	COG0802	atpase or kinase
ABE41_RS02675	COG1214	PFAM Peptidase M22, glycoprotease
ABE41_RS02680	COG0456	acetyltransferase
ABE41_RS02690	COG0488	(ABC) transporter
ABE41_RS02695	COG0315	cyclic pyranopterin monophosphate synthase activity
ABE41_RS02700	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
ABE41_RS02705	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
ABE41_RS02710	COG0805	protein transport
ABE41_RS02720	COG1266	CAAX protease self-immunity
ABE41_RS02725	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
ABE41_RS02730	COG0459	protein refolding
ABE41_RS02765	COG3485	protocatechuate 3,4-dioxygenase
ABE41_RS02770	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
ABE41_RS02775	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ABE41_RS02780	COG4948	Mandelate Racemase Muconate Lactonizing
ABE41_RS02785	COG0183	Belongs to the thiolase family
ABE41_RS02795	COG0596	Alpha beta hydrolase
ABE41_RS02800	COG0196	riboflavin kinase activity
ABE41_RS02805	COG3546	catalase activity
ABE41_RS02810	COG0714	Associated with various cellular activities
ABE41_RS02815	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
ABE41_RS02820	COG1305	Transglutaminase-like
ABE41_RS02825	COG0518	GMP synthase (glutamine-hydrolyzing) activity
ABE41_RS02825	COG0519	Catalyzes the synthesis of GMP from XMP
ABE41_RS02830	COG2252	PERMEase
ABE41_RS02835	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
ABE41_RS02915	COG2304	oxidoreductase activity
ABE41_RS02935	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
ABE41_RS03050	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABE41_RS03050	COG0072	phenylalanine-tRNA ligase activity
ABE41_RS03055	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
ABE41_RS03080	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ABE41_RS03085	COG2766	serine protein kinase
ABE41_RS03095	COG2718	Belongs to the UPF0229 family
ABE41_RS03100	COG2333	competence protein COMEC
ABE41_RS03100	COG0658	competence protein
ABE41_RS03105	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ABE41_RS03110	COG0346	lactoylglutathione lyase activity
ABE41_RS03115	COG3153	acetyltransferase
ABE41_RS03115	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ABE41_RS03120	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ABE41_RS03125	COG1937	Protein conserved in bacteria
ABE41_RS03130	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
ABE41_RS03130	COG0425	Belongs to the sulfur carrier protein TusA family
ABE41_RS03135	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABE41_RS03135	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
ABE41_RS03140	COG0425	Belongs to the sulfur carrier protein TusA family
ABE41_RS03145	COG2210	Belongs to the sulfur carrier protein TusA family
ABE41_RS03150	COG0730	response to heat
ABE41_RS03160	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
ABE41_RS03165	COG0346	lactoylglutathione lyase activity
ABE41_RS03170	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
ABE41_RS03175	COG0640	Transcriptional regulator
ABE41_RS03180	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ABE41_RS03195	COG2719	SpoVR family
ABE41_RS03220	COG0583	DNA-binding transcription factor activity
ABE41_RS03230	COG0583	DNA-binding transcription factor activity
ABE41_RS03240	COG0477	Major facilitator Superfamily
ABE41_RS03250	COG2205	protein histidine kinase activity
ABE41_RS03255	COG1388	LysM domain
ABE41_RS03260	COG0640	Transcriptional regulator
ABE41_RS03280	COG1366	Belongs to the anti-sigma-factor antagonist family
ABE41_RS03290	COG4191	Histidine kinase
ABE41_RS03305	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ABE41_RS03305	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ABE41_RS03310	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
ABE41_RS03310	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
ABE41_RS03320	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
ABE41_RS03325	COG1388	LysM domain
ABE41_RS03325	COG3858	chitin binding
ABE41_RS03330	COG1595	DNA-templated transcription, initiation
ABE41_RS03340	COG0659	secondary active sulfate transmembrane transporter activity
ABE41_RS03350	COG1231	oxidoreductase activity
ABE41_RS03355	COG1733	regulation of RNA biosynthetic process
ABE41_RS03360	COG2814	Major facilitator Superfamily
ABE41_RS03390	COG0697	spore germination
ABE41_RS03395	COG2076	Multidrug Resistance protein
ABE41_RS03405	COG0789	Transcriptional regulator
ABE41_RS03410	COG5522	Integral membrane protein (intg_mem_TP0381)
ABE41_RS03425	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
ABE41_RS03430	COG0307	riboflavin synthase, alpha
ABE41_RS03435	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
ABE41_RS03435	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
ABE41_RS03440	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
ABE41_RS03450	COG1132	(ABC) transporter
ABE41_RS03455	COG1132	(ABC) transporter
ABE41_RS03490	COG0640	Transcriptional regulator
ABE41_RS03505	COG0765	amino acid transport
ABE41_RS03510	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABE41_RS03515	COG3842	ATPase activity
ABE41_RS03530	COG2508	Transcriptional regulator
ABE41_RS03535	COG0726	polysaccharide deacetylase
ABE41_RS03545	COG4399	Belongs to the UPF0754 family
ABE41_RS03550	COG3679	Belongs to the UPF0342 family
ABE41_RS03555	COG0561	phosphatase activity
ABE41_RS03565	COG1012	belongs to the aldehyde dehydrogenase family
ABE41_RS03580	COG4152	abc transporter atp-binding protein
ABE41_RS03585	COG1668	transmembrane transport
ABE41_RS03590	COG0420	3'-5' exonuclease activity
ABE41_RS03595	COG4717	serine-type aminopeptidase activity
ABE41_RS03600	COG0745	RESPONSE REGULATOR receiver
ABE41_RS03605	COG2205	protein histidine kinase activity
ABE41_RS03605	COG2770	Histidine kinase
ABE41_RS03610	COG3481	metal-dependent phosphohydrolase, HD sub domain
ABE41_RS03625	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ABE41_RS03645	COG1846	Transcriptional regulator
ABE41_RS03670	COG0537	adenosine 5'-monophosphoramidase activity
ABE41_RS03680	COG1131	(ABC) transporter
ABE41_RS03685	COG4473	ABC transporter
ABE41_RS03690	COG0277	FAD linked oxidase domain protein
ABE41_RS03710	COG0671	phosphoesterase, PA-phosphatase related
ABE41_RS03715	COG1597	lipid kinase activity
ABE41_RS03720	COG2329	Antibiotic biosynthesis monooxygenase
ABE41_RS03725	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ABE41_RS03735	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
ABE41_RS03740	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
ABE41_RS03745	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
ABE41_RS03750	COG2205	protein histidine kinase activity
ABE41_RS03755	COG1309	transcriptional regulator
ABE41_RS03760	COG1511	domain protein
ABE41_RS03765	COG0517	IMP dehydrogenase activity
ABE41_RS03765	COG1125	glycine betaine transport
ABE41_RS03770	COG1174	glycine betaine transport
ABE41_RS03775	COG1126	abc transporter atp-binding protein
ABE41_RS03780	COG1609	Transcriptional regulator
ABE41_RS03785	COG1653	transport
ABE41_RS03805	COG1234	tRNA 3'-trailer cleavage
ABE41_RS03810	COG0095	Lipoate-protein ligase
ABE41_RS03815	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
ABE41_RS03820	COG3396	Phenylacetate-CoA oxygenase
ABE41_RS03835	COG2151	metal-sulfur cluster biosynthetic enzyme
ABE41_RS03845	COG1024	Enoyl-CoA hydratase
ABE41_RS03850	COG1024	Enoyl-CoA hydratase
ABE41_RS03855	COG1012	belongs to the aldehyde dehydrogenase family
ABE41_RS03860	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABE41_RS03865	COG0183	Belongs to the thiolase family
ABE41_RS03870	COG1024	Enoyl-CoA hydratase
ABE41_RS03875	COG3327	negative regulation of DNA-templated transcription, initiation
ABE41_RS03890	COG0733	neurotransmitter:sodium symporter activity
ABE41_RS03895	COG4221	oxidoreductase activity
ABE41_RS03945	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
ABE41_RS03955	COG0561	phosphatase activity
ABE41_RS03960	COG0584	glycerophosphoryl diester phosphodiesterase
ABE41_RS03970	COG1131	(ABC) transporter
ABE41_RS03975	COG1725	Transcriptional regulator
ABE41_RS03985	COG0501	Belongs to the peptidase M48B family
ABE41_RS03990	COG1360	Flagellar Motor Protein
ABE41_RS03995	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
ABE41_RS04000	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ABE41_RS04005	COG5002	protein histidine kinase activity
ABE41_RS04010	COG2340	Cysteine-rich secretory protein family
ABE41_RS04040	COG1846	Transcriptional regulator
ABE41_RS04045	COG0860	N-Acetylmuramoyl-L-alanine amidase
ABE41_RS04050	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ABE41_RS04065	COG0569	domain protein
ABE41_RS04070	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
ABE41_RS04090	COG2986	histidine ammonia-lyase
ABE41_RS04095	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
ABE41_RS04100	COG1228	amidohydrolase
ABE41_RS04105	COG0010	Belongs to the arginase family
ABE41_RS04115	COG1404	Belongs to the peptidase S8 family
ABE41_RS04120	COG3594	Acyltransferase
ABE41_RS04125	COG0628	permease
ABE41_RS04130	COG1295	ribonuclease BN
ABE41_RS04135	COG0861	Integral membrane protein TerC family
ABE41_RS04140	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
ABE41_RS04145	COG1131	(ABC) transporter
ABE41_RS04150	COG2755	lipolytic protein G-D-S-L family
ABE41_RS04155	COG2311	Membrane
ABE41_RS04160	COG0640	Transcriptional regulator
ABE41_RS04175	COG1937	Protein conserved in bacteria
ABE41_RS04180	COG2217	Heavy metal translocating P-type atpase
ABE41_RS04190	COG0655	NAD(P)H dehydrogenase (quinone) activity
ABE41_RS04225	COG0693	protein deglycase activity
ABE41_RS04230	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
ABE41_RS04235	COG0778	Nitroreductase
ABE41_RS04245	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
ABE41_RS04265	COG0714	Associated with various cellular activities
ABE41_RS04275	COG3584	3D domain protein
ABE41_RS04275	COG3583	domain protein
ABE41_RS04290	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
ABE41_RS04300	COG1028	Short-chain dehydrogenase reductase Sdr
ABE41_RS04305	COG0776	regulation of translation
ABE41_RS04310	COG5002	protein histidine kinase activity
ABE41_RS04325	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
ABE41_RS04335	COG0840	transmembrane signaling receptor activity
ABE41_RS04345	COG0393	Putative heavy-metal-binding
ABE41_RS04350	COG0277	FAD linked oxidase domain protein
ABE41_RS04360	COG0542	response to heat
ABE41_RS04395	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
ABE41_RS04415	COG0656	L-ascorbic acid biosynthetic process
ABE41_RS04420	COG0346	lactoylglutathione lyase activity
ABE41_RS04425	COG0400	carboxylic ester hydrolase activity
ABE41_RS04430	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABE41_RS04435	COG4412	M6 family metalloprotease domain protein
ABE41_RS04435	COG1404	Belongs to the peptidase S8 family
ABE41_RS04440	COG3239	Fatty acid desaturase
ABE41_RS04475	COG0003	Pfam Anion-transporting ATPase
ABE41_RS04495	COG2801	Transposase and inactivated derivatives
ABE41_RS04505	COG3689	TIGRFAM TIGR03943 family protein
ABE41_RS04510	COG0701	Predicted permease
ABE41_RS04515	COG2720	vancomycin resistance protein
ABE41_RS04520	COG0598	Magnesium transport protein CorA
ABE41_RS04530	COG0671	phosphoesterase, PA-phosphatase related
ABE41_RS04565	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABE41_RS04575	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABE41_RS04580	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ABE41_RS04585	COG0460	homoserine dehydrogenase
ABE41_RS04605	COG1970	mechanosensitive ion channel activity
ABE41_RS04615	COG2801	Transposase and inactivated derivatives
ABE41_RS04630	COG1199	ATP-dependent helicase activity
ABE41_RS04655	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
ABE41_RS04660	COG1473	amidohydrolase
ABE41_RS04680	COG0277	FAD linked oxidase domain protein
ABE41_RS04685	COG2271	Major facilitator Superfamily
ABE41_RS04700	COG0494	nUDIX hydrolase
ABE41_RS04710	COG0656	L-ascorbic acid biosynthetic process
ABE41_RS04725	COG2267	carboxylic ester hydrolase activity
ABE41_RS04750	COG0076	glutamate decarboxylase activity
ABE41_RS04795	COG3403	YqcI/YcgG family
ABE41_RS04810	COG1834	amidinotransferase
ABE41_RS04815	COG1063	alcohol dehydrogenase
ABE41_RS04820	COG3852	Histidine kinase
ABE41_RS04830	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
ABE41_RS04840	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
ABE41_RS04850	COG2368	4-hydroxyphenylacetate
ABE41_RS04895	COG1942	4-Oxalocrotonate Tautomerase
ABE41_RS04900	COG3546	catalase activity
ABE41_RS04905	COG4585	Histidine kinase
ABE41_RS04910	COG2197	response regulator
ABE41_RS04920	COG1999	signal sequence binding
ABE41_RS04925	COG2814	Major facilitator Superfamily
ABE41_RS04930	COG1262	PFAM Formylglycine-generating sulfatase enzyme
ABE41_RS04935	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
ABE41_RS04940	COG1742	UPF0060 membrane protein
ABE41_RS04945	COG0346	lactoylglutathione lyase activity
ABE41_RS04950	COG2720	vancomycin resistance protein
ABE41_RS05030	COG1764	response to oxidative stress
ABE41_RS05035	COG2814	Major facilitator Superfamily
ABE41_RS05070	COG1253	flavin adenine dinucleotide binding
ABE41_RS05085	COG4191	Histidine kinase
ABE41_RS05090	COG4912	Dna alkylation repair
ABE41_RS05095	COG2304	oxidoreductase activity
ABE41_RS05100	COG3540	Alkaline phosphatase
ABE41_RS05120	COG2169	Transcriptional regulator
ABE41_RS05125	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
ABE41_RS05130	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
ABE41_RS05150	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
ABE41_RS05165	COG3973	AAA domain
ABE41_RS05245	COG3459	Glycosyltransferase 36 associated
ABE41_RS05255	COG0395	ABC-type sugar transport system, permease component
ABE41_RS05265	COG1653	transport
ABE41_RS05270	COG1472	Belongs to the glycosyl hydrolase 3 family
ABE41_RS05275	COG3459	Glycosyltransferase 36 associated
ABE41_RS05280	COG1609	Transcriptional regulator
ABE41_RS05300	COG3681	Belongs to the UPF0597 family
ABE41_RS05335	COG1132	(ABC) transporter
ABE41_RS05340	COG1132	(ABC) transporter
ABE41_RS05345	COG3386	PFAM SMP-30 Gluconolaconase
ABE41_RS05360	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ABE41_RS05375	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
ABE41_RS05380	COG2427	Protein of unknown function (DUF1641)
ABE41_RS05385	COG3383	formate dehydrogenase (NAD+) activity
ABE41_RS05390	COG5609	conserved protein (DUF2294)
ABE41_RS05395	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
ABE41_RS05410	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
ABE41_RS05415	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ABE41_RS05430	COG2356	endonuclease I
ABE41_RS05435	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
ABE41_RS05440	COG3290	protein histidine kinase activity
ABE41_RS05445	COG4565	transcriptional regulatory protein
ABE41_RS05450	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ABE41_RS05455	COG1301	dicarboxylic acid transport
ABE41_RS05460	COG2070	2-Nitropropane dioxygenase
ABE41_RS05480	COG2223	nitrite transmembrane transporter activity
ABE41_RS05505	COG2318	DinB family
ABE41_RS05510	COG0726	polysaccharide deacetylase
ABE41_RS05535	COG0640	Transcriptional regulator
ABE41_RS05540	COG3708	Transcriptional regulator
ABE41_RS05540	COG2207	Transcriptional regulator
ABE41_RS05545	COG0592	DNA-directed DNA polymerase activity
ABE41_RS05550	COG0596	Alpha beta hydrolase
ABE41_RS05555	COG0456	acetyltransferase
ABE41_RS05560	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ABE41_RS05565	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
ABE41_RS05575	COG1028	Short-chain dehydrogenase reductase Sdr
ABE41_RS05600	COG5002	protein histidine kinase activity
ABE41_RS05615	COG0385	Bile acid
ABE41_RS05625	COG0004	ammonium transporteR
ABE41_RS05635	COG2176	DNA-directed DNA polymerase activity
ABE41_RS05640	COG0789	Transcriptional regulator
ABE41_RS05645	COG0778	Nitroreductase
ABE41_RS05655	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
ABE41_RS05685	COG2195	Cleaves the N-terminal amino acid of tripeptides
ABE41_RS05690	COG0006	proline dipeptidase activity
ABE41_RS05720	COG2321	neutral zinc metallopeptidase
ABE41_RS05725	COG0673	inositol 2-dehydrogenase activity
ABE41_RS05745	COG0697	spore germination
ABE41_RS05765	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
ABE41_RS05775	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABE41_RS05785	COG1280	lysine exporter protein (LysE YggA)
ABE41_RS05790	COG1113	amino acid transport
ABE41_RS05815	COG1366	Belongs to the anti-sigma-factor antagonist family
ABE41_RS05820	COG1346	cytolysis
ABE41_RS05825	COG1380	Effector of murein hydrolase LrgA
ABE41_RS05830	COG0789	Transcriptional regulator
ABE41_RS05835	COG1028	Short-chain dehydrogenase reductase Sdr
ABE41_RS05840	COG1522	sequence-specific DNA binding
ABE41_RS05845	COG1902	pentaerythritol trinitrate reductase activity
ABE41_RS05860	COG1388	LysM domain
ABE41_RS05860	COG0791	NLP P60 protein
ABE41_RS05875	COG1136	(ABC) transporter
ABE41_RS05875	COG0577	efflux transmembrane transporter activity
ABE41_RS05895	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ABE41_RS05945	COG0747	negative chemotaxis
ABE41_RS05950	COG0601	transmembrane transport
ABE41_RS05960	COG0444	Belongs to the ABC transporter superfamily
ABE41_RS05965	COG4608	Belongs to the ABC transporter superfamily
ABE41_RS05970	COG0477	Major facilitator Superfamily
ABE41_RS05980	COG1404	Belongs to the peptidase S8 family
ABE41_RS06010	COG0662	Cupin 2, conserved barrel domain protein
ABE41_RS06015	COG1120	ATPase activity
ABE41_RS06020	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
ABE41_RS06025	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ABE41_RS06030	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ABE41_RS06035	COG0492	ferredoxin-NADP+ reductase activity
ABE41_RS06040	COG1595	DNA-templated transcription, initiation
ABE41_RS06055	COG2814	Major facilitator Superfamily
ABE41_RS06065	COG0583	DNA-binding transcription factor activity
ABE41_RS06070	COG2814	Major facilitator Superfamily
ABE41_RS06075	COG2130	NADP-dependent
ABE41_RS06135	COG0406	alpha-ribazole phosphatase activity
ABE41_RS06160	COG1329	Transcriptional regulator
ABE41_RS06180	COG0586	Pfam SNARE associated Golgi protein
ABE41_RS06220	COG1011	Hydrolase
ABE41_RS06225	COG1619	proteins homologs of microcin C7 resistance protein MccF
ABE41_RS06235	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
ABE41_RS06275	COG3708	Transcriptional regulator
ABE41_RS06275	COG2207	Transcriptional regulator
ABE41_RS06295	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ABE41_RS06325	COG1051	belongs to the nudix hydrolase family
ABE41_RS06380	COG0673	inositol 2-dehydrogenase activity
ABE41_RS06400	COG2267	carboxylic ester hydrolase activity
ABE41_RS06410	COG1024	Enoyl-CoA hydratase
ABE41_RS06415	COG2031	fatty acid transporter
ABE41_RS06420	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
ABE41_RS06425	COG0604	alcohol dehydrogenase
ABE41_RS06430	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABE41_RS06435	COG1024	Enoyl-CoA hydratase
ABE41_RS06465	COG0583	DNA-binding transcription factor activity
ABE41_RS06470	COG1228	amidohydrolase
ABE41_RS06495	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABE41_RS06500	COG0444	Belongs to the ABC transporter superfamily
ABE41_RS06505	COG4608	Belongs to the ABC transporter superfamily
ABE41_RS06535	COG1028	Short-chain dehydrogenase reductase Sdr
ABE41_RS06575	COG0210	DNA helicase
ABE41_RS06580	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
ABE41_RS06615	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ABE41_RS06620	COG1802	Transcriptional regulator
ABE41_RS06625	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABE41_RS06630	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
ABE41_RS06635	COG0066	3-isopropylmalate dehydratase activity
ABE41_RS06645	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ABE41_RS06655	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABE41_RS06680	COG3832	glyoxalase III activity
ABE41_RS06695	COG0531	amino acid
ABE41_RS06700	COG0697	spore germination
ABE41_RS06710	COG1366	Belongs to the anti-sigma-factor antagonist family
ABE41_RS06730	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ABE41_RS06765	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ABE41_RS06770	COG2329	Antibiotic biosynthesis monooxygenase
ABE41_RS06785	COG0477	Major facilitator Superfamily
ABE41_RS06795	COG1280	lysine exporter protein (LysE YggA)
ABE41_RS06800	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
ABE41_RS06805	COG0494	nUDIX hydrolase
ABE41_RS06820	COG3655	Transcriptional regulator
ABE41_RS06825	COG3739	integral membrane protein
ABE41_RS06860	COG2267	carboxylic ester hydrolase activity
ABE41_RS06885	COG0640	Transcriptional regulator
ABE41_RS06895	COG0372	Belongs to the citrate synthase family
ABE41_RS06900	COG0583	DNA-binding transcription factor activity
ABE41_RS06915	COG0456	acetyltransferase
ABE41_RS06915	COG1846	Transcriptional regulator
ABE41_RS06920	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
ABE41_RS06930	COG1404	Belongs to the peptidase S8 family
ABE41_RS06940	COG0583	DNA-binding transcription factor activity
ABE41_RS06950	COG0077	Prephenate dehydratase
ABE41_RS06955	COG1132	(ABC) transporter
ABE41_RS06975	COG2816	NAD+ diphosphatase activity
ABE41_RS06990	COG0519	Catalyzes the synthesis of GMP from XMP
ABE41_RS07065	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ABE41_RS07090	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
ABE41_RS07135	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
ABE41_RS07145	COG1764	response to oxidative stress
ABE41_RS07150	COG1846	Transcriptional regulator
ABE41_RS07155	COG0596	Alpha beta hydrolase
ABE41_RS07160	COG5577	PFAM Coat F domain
ABE41_RS07165	COG2404	hydrolase activity, acting on ester bonds
ABE41_RS07170	COG2814	Major facilitator Superfamily
ABE41_RS07180	COG5002	protein histidine kinase activity
ABE41_RS07180	COG3850	Histidine kinase
ABE41_RS07185	COG0745	RESPONSE REGULATOR receiver
ABE41_RS07195	COG1960	acyl-CoA dehydrogenase activity
ABE41_RS07230	COG1309	transcriptional regulator
ABE41_RS07235	COG1511	domain protein
ABE41_RS07235	COG0842	Transport permease protein
ABE41_RS07240	COG1131	(ABC) transporter
ABE41_RS07245	COG0589	response to stress
ABE41_RS07260	COG2050	protein possibly involved in aromatic compounds catabolism
ABE41_RS07265	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ABE41_RS07275	COG1404	Belongs to the peptidase S8 family
ABE41_RS07290	COG4297	protein containing double-stranded beta helix domain
ABE41_RS07300	COG0523	cobalamin synthesis protein
ABE41_RS07330	COG5416	Lipopolysaccharide assembly protein A domain
ABE41_RS07340	COG1609	Transcriptional regulator
ABE41_RS07350	COG1653	transport
ABE41_RS07355	COG1175	transmembrane transport
ABE41_RS07360	COG0395	ABC-type sugar transport system, permease component
ABE41_RS07370	COG1268	BioY protein
ABE41_RS07375	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
ABE41_RS07380	COG0668	transmembrane transport
ABE41_RS07390	COG1115	amino acid carrier protein
ABE41_RS07405	COG1063	alcohol dehydrogenase
ABE41_RS07420	COG0582	viral genome integration into host DNA
ABE41_RS07425	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
ABE41_RS07430	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
ABE41_RS07430	COG0131	Imidazoleglycerol-phosphate dehydratase
ABE41_RS07440	COG0406	alpha-ribazole phosphatase activity
ABE41_RS07475	COG3437	response regulator, receiver
ABE41_RS07475	COG2770	Histidine kinase
ABE41_RS07480	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
ABE41_RS07485	COG1280	lysine exporter protein (LysE YggA)
ABE41_RS07490	COG1335	isochorismatase
ABE41_RS07515	COG2233	PERMEase
ABE41_RS07530	COG4824	toxin secretion phage lysis holin
ABE41_RS07540	COG3706	GGDEF domain
ABE41_RS07545	COG3949	Membrane
ABE41_RS07555	COG1349	DNA-binding transcription factor activity
ABE41_RS07570	COG1695	Transcriptional regulator
ABE41_RS07575	COG0531	amino acid
ABE41_RS07585	COG0653	protein targeting
ABE41_RS07600	COG0351	phosphomethylpyrimidine kinase
ABE41_RS07605	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
ABE41_RS07635	COG0740	serine-type endopeptidase activity
ABE41_RS07640	COG2223	nitrite transmembrane transporter activity
ABE41_RS07650	COG0628	permease
ABE41_RS07665	COG0673	inositol 2-dehydrogenase activity
ABE41_RS07670	COG0673	inositol 2-dehydrogenase activity
ABE41_RS07680	COG3858	chitin binding
ABE41_RS07680	COG1388	LysM domain
ABE41_RS07685	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
ABE41_RS07705	COG4533	DNA binding
ABE41_RS07710	COG0306	phosphate transporter
ABE41_RS07715	COG1392	Phosphate transport regulator
ABE41_RS07725	COG1131	(ABC) transporter
ABE41_RS07735	COG2217	Heavy metal translocating P-type atpase
ABE41_RS07750	COG2378	regulation of single-species biofilm formation
ABE41_RS07755	COG1846	Transcriptional regulator
ABE41_RS07760	COG1307	EDD domain protein, DegV family
ABE41_RS07765	COG0730	response to heat
ABE41_RS07770	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
ABE41_RS07775	COG1607	acyl-coa hydrolase
ABE41_RS07780	COG0697	spore germination
ABE41_RS07790	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
ABE41_RS07800	COG2135	peptidase activity
ABE41_RS07820	COG0561	phosphatase activity
ABE41_RS07825	COG0860	N-Acetylmuramoyl-L-alanine amidase
ABE41_RS07825	COG4991	sh3 domain protein
ABE41_RS07825	COG3103	Sh3 type 3 domain protein
ABE41_RS07850	COG0768	penicillin binding
ABE41_RS07860	COG1132	(ABC) transporter
ABE41_RS07865	COG1132	(ABC) transporter
ABE41_RS07875	COG0517	IMP dehydrogenase activity
ABE41_RS07875	COG0516	GMP reductase activity
ABE41_RS07880	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
ABE41_RS07885	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
ABE41_RS07890	COG0586	Pfam SNARE associated Golgi protein
ABE41_RS07900	COG1525	nuclease
ABE41_RS07935	COG1120	ATPase activity
ABE41_RS07940	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ABE41_RS07945	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ABE41_RS07950	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
ABE41_RS07970	COG0598	Magnesium transport protein CorA
ABE41_RS07985	COG1428	Deoxynucleoside kinase
ABE41_RS07995	COG2211	Major facilitator Superfamily
ABE41_RS08000	COG0346	lactoylglutathione lyase activity
ABE41_RS08005	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
ABE41_RS08025	COG2801	Transposase and inactivated derivatives
ABE41_RS08035	COG0840	transmembrane signaling receptor activity
ABE41_RS08060	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABE41_RS08070	COG1012	belongs to the aldehyde dehydrogenase family
ABE41_RS08085	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
ABE41_RS08100	COG0398	Pfam SNARE associated Golgi protein
ABE41_RS08105	COG0024	Methionine aminopeptidase
ABE41_RS08110	COG2259	Doxx family
ABE41_RS08115	COG2239	Acts as a magnesium transporter
ABE41_RS08125	COG2197	response regulator
ABE41_RS08140	COG0477	Major facilitator Superfamily
ABE41_RS08145	COG1846	Transcriptional regulator
ABE41_RS08160	COG1366	Belongs to the anti-sigma-factor antagonist family
ABE41_RS08180	COG3706	GGDEF domain
ABE41_RS08190	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
ABE41_RS08195	COG1074	ATP-dependent DNA helicase activity
ABE41_RS08200	COG0420	3'-5' exonuclease activity
ABE41_RS08205	COG0419	ATPase involved in DNA repair
ABE41_RS08220	COG0697	spore germination
ABE41_RS08240	COG0179	Fumarylacetoacetate (FAA) hydrolase
ABE41_RS08245	COG1012	belongs to the aldehyde dehydrogenase family
ABE41_RS08250	COG1028	Short-chain dehydrogenase reductase Sdr
ABE41_RS08265	COG3300	MHYT domain
ABE41_RS08265	COG5001	Diguanylate cyclase
ABE41_RS08270	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
ABE41_RS08275	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
ABE41_RS08280	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ABE41_RS08285	COG0436	Aminotransferase
ABE41_RS08290	COG1850	ribulose-bisphosphate carboxylase activity
ABE41_RS08295	COG4359	Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
ABE41_RS08300	COG0235	Class ii aldolase
ABE41_RS08305	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
ABE41_RS08310	COG0628	permease
ABE41_RS08315	COG0367	asparagine synthase
ABE41_RS08320	COG0534	Mate efflux family protein
ABE41_RS08330	COG2182	Extracellular solute-binding protein
ABE41_RS08335	COG1175	transmembrane transport
ABE41_RS08340	COG3833	ABC-type maltose transport systems, permease component
ABE41_RS08345	COG1874	Beta-galactosidase
ABE41_RS08345	COG0366	Alpha amylase catalytic
ABE41_RS08350	COG1609	Transcriptional regulator
ABE41_RS08360	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
ABE41_RS08365	COG4191	Histidine kinase
ABE41_RS08370	COG1307	EDD domain protein, DegV family
ABE41_RS08375	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
ABE41_RS08405	COG0561	phosphatase activity
ABE41_RS08410	COG1073	alpha beta
ABE41_RS08420	COG0303	'Molybdopterin
ABE41_RS08425	COG1763	Mo-molybdopterin cofactor biosynthetic process
ABE41_RS08430	COG0314	molybdopterin synthase activity
ABE41_RS08435	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
ABE41_RS08440	COG1403	HNH endonuclease
ABE41_RS08460	COG2267	carboxylic ester hydrolase activity
ABE41_RS08465	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ABE41_RS08480	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
ABE41_RS08485	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ABE41_RS08495	COG0180	Tryptophanyl-tRNA synthetase
ABE41_RS08505	COG4166	transmembrane transport
ABE41_RS08510	COG0601	transmembrane transport
ABE41_RS08515	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABE41_RS08520	COG0444	Belongs to the ABC transporter superfamily
ABE41_RS08525	COG4608	Belongs to the ABC transporter superfamily
ABE41_RS08535	COG1418	mRNA catabolic process
ABE41_RS08540	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
ABE41_RS08550	COG0456	acetyltransferase
ABE41_RS08555	COG1393	Belongs to the ArsC family
ABE41_RS08560	COG0861	Integral membrane protein TerC family
ABE41_RS08565	COG4862	establishment of competence for transformation
ABE41_RS08575	COG1164	Oligoendopeptidase f
ABE41_RS08580	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
ABE41_RS08585	COG2346	COG2346, Truncated hemoglobins
ABE41_RS08590	COG0741	lytic transglycosylase activity
ABE41_RS08595	COG4116	CYTH
ABE41_RS08605	COG2357	RelA SpoT domain protein
ABE41_RS08615	COG0564	pseudouridine synthase activity
ABE41_RS08620	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
ABE41_RS08625	COG0772	Belongs to the SEDS family
ABE41_RS08630	COG0569	domain protein
ABE41_RS08630	COG0475	glutathione-regulated potassium exporter activity
ABE41_RS08635	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
ABE41_RS08680	COG2046	Belongs to the sulfate adenylyltransferase family
ABE41_RS08685	COG0529	Catalyzes the synthesis of activated sulfate
ABE41_RS08710	COG0463	Glycosyl transferase, family 2
ABE41_RS08710	COG1216	Glycosyl transferase, family 2
ABE41_RS08750	COG2323	membrane
ABE41_RS08755	COG2153	protein acetylation
ABE41_RS08765	COG2382	esterase
ABE41_RS08770	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
ABE41_RS08790	COG1216	Glycosyl transferase, family 2
ABE41_RS08810	COG1028	Short-chain dehydrogenase reductase Sdr
ABE41_RS08815	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
ABE41_RS08830	COG0583	DNA-binding transcription factor activity
ABE41_RS08835	COG2171	N-acyltransferase activity
ABE41_RS08840	COG1473	amidohydrolase
ABE41_RS08850	COG1253	flavin adenine dinucleotide binding
ABE41_RS08855	COG4572	Cation transport regulator
ABE41_RS08860	COG0450	alkyl hydroperoxide reductase
ABE41_RS08865	COG0569	domain protein
ABE41_RS08870	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
ABE41_RS08875	COG5503	Protein of unknown function (DUF1447)
ABE41_RS08880	COG0697	spore germination
ABE41_RS08885	COG1966	Carbon starvation protein
ABE41_RS08900	COG0022	dehydrogenase e1 component
ABE41_RS08905	COG0508	dehydrogenase complex catalyzes the overall conversion of
ABE41_RS08920	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABE41_RS08935	COG1982	Orn Lys Arg decarboxylase major
ABE41_RS08945	COG4493	Belongs to the UPF0637 family
ABE41_RS08955	COG0483	inositol monophosphate 1-phosphatase activity
ABE41_RS08960	COG1217	gtp-binding protein TYPA
ABE41_RS08985	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
ABE41_RS08990	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
ABE41_RS08995	COG4838	Belongs to the UPF0358 family
ABE41_RS09000	COG0772	Belongs to the SEDS family
ABE41_RS09005	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
ABE41_RS09010	COG1612	heme a metabolic process
ABE41_RS09015	COG0109	protoheme IX farnesyltransferase activity
ABE41_RS09025	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
ABE41_RS09040	COG3336	cytochrome c oxidase
ABE41_RS09055	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
ABE41_RS09060	COG2340	Cysteine-rich secretory protein family
ABE41_RS09065	COG2050	protein possibly involved in aromatic compounds catabolism
ABE41_RS09085	COG3679	Belongs to the UPF0342 family
ABE41_RS09095	COG4471	UPF0298 protein
ABE41_RS09105	COG0742	ribosomal rna small subunit methyltransferase
ABE41_RS09110	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
ABE41_RS09115	COG3314	Sporulation integral membrane protein YlbJ
ABE41_RS09120	COG1752	Esterase of the alpha-beta hydrolase superfamily
ABE41_RS09125	COG3480	Lon protease (S16) C-terminal proteolytic domain
ABE41_RS09130	COG1323	Belongs to the UPF0348 family
ABE41_RS09135	COG1399	metal-binding, possibly nucleic acid-binding protein
ABE41_RS09140	COG0333	Belongs to the bacterial ribosomal protein bL32 family
ABE41_RS09145	COG1024	Enoyl-CoA hydratase
ABE41_RS09155	COG0454	-acetyltransferase
ABE41_RS09160	COG0439	Biotin carboxylase
ABE41_RS09165	COG5016	pyruvate
ABE41_RS09165	COG0511	ligase activity, forming carbon-carbon bonds
ABE41_RS09170	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
ABE41_RS09175	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
ABE41_RS09185	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
ABE41_RS09190	COG2001	Belongs to the MraZ family
ABE41_RS09195	COG0275	rRNA processing
ABE41_RS09205	COG0768	penicillin binding
ABE41_RS09210	COG0768	penicillin binding
ABE41_RS09215	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
ABE41_RS09220	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
ABE41_RS09225	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ABE41_RS09230	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
ABE41_RS09235	COG0772	Belongs to the SEDS family
ABE41_RS09240	COG0812	UDP-N-acetylmuramate dehydrogenase activity
ABE41_RS09245	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
ABE41_RS09250	COG3879	Bacterial protein of unknown function (DUF881)
ABE41_RS09255	COG3879	Bacterial protein of unknown function (DUF881)
ABE41_RS09260	COG3856	small basic protein
ABE41_RS09265	COG0849	cell division
ABE41_RS09270	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
ABE41_RS09290	COG1191	sigma factor activity
ABE41_RS09295	COG1191	sigma factor activity
ABE41_RS09300	COG1873	PFAM PRC-barrel domain
ABE41_RS09310	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
ABE41_RS09315	COG1799	cell septum assembly
ABE41_RS09320	COG0762	integral membrane protein
ABE41_RS09325	COG2302	S4 RNA-binding domain
ABE41_RS09330	COG3599	regulation of cell shape
ABE41_RS09340	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
ABE41_RS09345	COG0564	pseudouridine synthase activity
ABE41_RS09350	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
ABE41_RS09365	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
ABE41_RS09375	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
ABE41_RS09380	COG0543	2 iron, 2 sulfur cluster binding
ABE41_RS09385	COG0167	dihydroorotate dehydrogenase activity
ABE41_RS09390	COG0284	orotidine-5'-phosphate decarboxylase activity
ABE41_RS09395	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
ABE41_RS09400	COG2226	methyltransferase
ABE41_RS09410	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
ABE41_RS09415	COG2052	Domain of unknown function (DUF370)
ABE41_RS09420	COG0194	GDP metabolic process
ABE41_RS09425	COG1758	RNA polymerase activity
ABE41_RS09430	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
ABE41_RS09435	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
ABE41_RS09440	COG0242	peptide deformylase activity
ABE41_RS09450	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
ABE41_RS09450	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
ABE41_RS09455	COG0820	rRNA (adenine-C2-)-methyltransferase activity
ABE41_RS09460	COG0631	protein serine/threonine phosphatase activity
ABE41_RS09465	COG2815	serine threonine protein kinase
ABE41_RS09465	COG0515	serine threonine protein kinase
ABE41_RS09470	COG1162	GTPase activity
ABE41_RS09475	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
ABE41_RS09480	COG3859	Proton-coupled thiamine transporter YuaJ
ABE41_RS09485	COG1564	THIamine pyrophosphokinase
ABE41_RS09495	COG0227	Belongs to the bacterial ribosomal protein bL28 family
ABE41_RS09500	COG1302	Protein conserved in bacteria
ABE41_RS09505	COG1461	Dihydroxyacetone kinase
ABE41_RS09510	COG1760	l-serine dehydratase
ABE41_RS09515	COG1760	l-serine dehydratase
ABE41_RS09520	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
ABE41_RS09525	COG1349	DNA-binding transcription factor activity
ABE41_RS09535	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
ABE41_RS09540	COG1028	Short-chain dehydrogenase reductase Sdr
ABE41_RS09545	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ABE41_RS09555	COG4840	Belongs to the UPF0435 family
ABE41_RS09560	COG1196	nuclear chromosome segregation
ABE41_RS09565	COG0552	protein localization to endoplasmic reticulum
ABE41_RS09570	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
ABE41_RS09575	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
ABE41_RS09580	COG0228	four-way junction DNA binding
ABE41_RS09585	COG1837	Belongs to the UPF0109 family
ABE41_RS09595	COG0336	Belongs to the RNA methyltransferase TrmD family
ABE41_RS09600	COG0335	large ribosomal subunit rRNA binding
ABE41_RS09610	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
ABE41_RS09615	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
ABE41_RS09625	COG2257	FlhB HrpN YscU SpaS Family
ABE41_RS09630	COG0045	succinate-CoA ligase (ADP-forming) activity
ABE41_RS09635	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
ABE41_RS09640	COG0758	DNA mediated transformation
ABE41_RS09645	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
ABE41_RS09650	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
ABE41_RS09655	COG4974	Belongs to the 'phage' integrase family
ABE41_RS09660	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
ABE41_RS09665	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
ABE41_RS09670	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
ABE41_RS09675	COG1815	bacterial-type flagellum-dependent cell motility
ABE41_RS09680	COG1558	bacterial-type flagellum-dependent cell motility
ABE41_RS09685	COG1677	Flagellar hook-basal body complex protein FliE
ABE41_RS09690	COG1766	The M ring may be actively involved in energy transduction
ABE41_RS09695	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
ABE41_RS09700	COG1317	bacterial-type flagellum organization
ABE41_RS09705	COG1157	protein secretion by the type III secretion system
ABE41_RS09710	COG2882	bacterial-type flagellum organization
ABE41_RS09725	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
ABE41_RS09735	COG4786	Flagellar basal body rod
ABE41_RS09740	COG1582	Flagellar protein (FlbD)
ABE41_RS09750	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
ABE41_RS09755	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
ABE41_RS09755	COG1776	CheC inhibitor of MCP methylation
ABE41_RS09760	COG2201	protein-glutamate methylesterase activity
ABE41_RS09765	COG3190	flagellar
ABE41_RS09770	COG1338	Plays a role in the flagellum-specific transport system
ABE41_RS09775	COG1987	bacterial-type flagellum assembly
ABE41_RS09780	COG1684	flagellar biosynthetic protein fliR
ABE41_RS09785	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
ABE41_RS09790	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
ABE41_RS09795	COG1419	protein localization to endoplasmic reticulum
ABE41_RS09800	COG0455	bacterial-type flagellum organization
ABE41_RS09805	COG2201	protein-glutamate methylesterase activity
ABE41_RS09810	COG2198	Histidine kinase
ABE41_RS09810	COG0643	Histidine kinase
ABE41_RS09815	COG0835	chemotaxis
ABE41_RS09820	COG1776	CheC inhibitor of MCP methylation
ABE41_RS09825	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
ABE41_RS09830	COG1191	sigma factor activity
ABE41_RS09850	COG0052	Belongs to the universal ribosomal protein uS2 family
ABE41_RS09855	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
ABE41_RS09860	COG0528	UMP kinase activity
ABE41_RS09865	COG0233	cytoplasmic translational termination
ABE41_RS09875	COG4589	Belongs to the CDS family
ABE41_RS09880	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
ABE41_RS09885	COG0750	zinc metalloprotease
ABE41_RS09890	COG0442	prolyl-tRNA aminoacylation
ABE41_RS09895	COG2176	DNA-directed DNA polymerase activity
ABE41_RS09900	COG0779	Required for maturation of 30S ribosomal subunits
ABE41_RS09905	COG0195	Participates in both transcription termination and antitermination
ABE41_RS09910	COG2740	Nucleic-acid-binding protein implicated in transcription termination
ABE41_RS09915	COG1358	cellular component organization or biogenesis
ABE41_RS09920	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
ABE41_RS09930	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
ABE41_RS09940	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
ABE41_RS09945	COG0196	riboflavin kinase activity
ABE41_RS09950	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
ABE41_RS09955	COG1185	polyribonucleotide nucleotidyltransferase activity
ABE41_RS09960	COG0726	polysaccharide deacetylase
ABE41_RS09965	COG0612	Peptidase, M16
ABE41_RS09970	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ABE41_RS09975	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
ABE41_RS09980	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
ABE41_RS09985	COG0527	aspartate kinase activity
ABE41_RS09995	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
ABE41_RS10000	COG0740	serine-type endopeptidase activity
ABE41_RS10010	COG4980	gas vesicle protein
ABE41_RS10010	COG1674	ftsk spoiiie
ABE41_RS10015	COG2188	Transcriptional regulator
ABE41_RS10020	COG1744	ABC transporter substrate-binding protein PnrA-like
ABE41_RS10025	COG3845	ABC transporter
ABE41_RS10030	COG4603	Belongs to the binding-protein-dependent transport system permease family
ABE41_RS10035	COG1079	Belongs to the binding-protein-dependent transport system permease family
ABE41_RS10040	COG0612	Peptidase, M16
ABE41_RS10045	COG0612	Peptidase, M16
ABE41_RS10050	COG0300	oxidoreductase activity
ABE41_RS10065	COG1426	Protein conserved in bacteria
ABE41_RS10070	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
ABE41_RS10075	COG1546	Belongs to the CinA family
ABE41_RS10075	COG1058	Belongs to the CinA family
ABE41_RS10080	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
ABE41_RS10085	COG1418	mRNA catabolic process
ABE41_RS10090	COG2359	stage V sporulation protein S
ABE41_RS10095	COG0674	pyruvate-flavodoxin oxidoreductase activity
ABE41_RS10095	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
ABE41_RS10100	COG1013	pyruvate-flavodoxin oxidoreductase activity
ABE41_RS10105	COG1063	alcohol dehydrogenase
ABE41_RS10110	COG0156	8-amino-7-oxononanoate synthase activity
ABE41_RS10120	COG4550	Control of competence regulator ComK, YlbF/YmcA
ABE41_RS10130	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
ABE41_RS10135	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
ABE41_RS10140	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
ABE41_RS10145	COG1923	regulation of RNA biosynthetic process
ABE41_RS10165	COG0464	growth
ABE41_RS10170	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
ABE41_RS10175	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
ABE41_RS10180	COG0789	Transcriptional regulator
ABE41_RS10185	COG0174	glutamine synthetase
ABE41_RS10190	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABE41_RS10200	COG2323	membrane
ABE41_RS10205	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ABE41_RS10230	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
ABE41_RS10245	COG2323	membrane
ABE41_RS10265	COG0300	oxidoreductase activity
ABE41_RS10270	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
ABE41_RS10275	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
ABE41_RS10280	COG1733	regulation of RNA biosynthetic process
ABE41_RS10295	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ABE41_RS10305	COG0697	spore germination
ABE41_RS10320	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ABE41_RS10360	COG4941	Belongs to the sigma-70 factor family
ABE41_RS10370	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
ABE41_RS10410	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
ABE41_RS10420	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
ABE41_RS10425	COG4224	UPF0291 protein
ABE41_RS10435	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
ABE41_RS10445	COG3763	UPF0154 protein
ABE41_RS10450	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
ABE41_RS10455	COG1132	(ABC) transporter
ABE41_RS10460	COG1132	(ABC) transporter
ABE41_RS10465	COG1876	peptidase activity
ABE41_RS10470	COG0785	Cytochrome C biogenesis protein
ABE41_RS10475	COG2111	Na H antiporter
ABE41_RS10480	COG4846	Membrane protein involved in cytochrome C biogenesis
ABE41_RS10500	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
ABE41_RS10505	COG3639	organic phosphonate transmembrane transporter activity
ABE41_RS10515	COG0709	Synthesizes selenophosphate from selenide and ATP
ABE41_RS10540	COG2155	Conserved Protein
ABE41_RS10545	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
ABE41_RS10565	COG0824	Thioesterase
ABE41_RS10575	COG4841	protein insertion into membrane
ABE41_RS10580	COG0688	phosphatidylethanolamine metabolic process
ABE41_RS10590	COG1757	Na H antiporter
ABE41_RS10595	COG0513	Belongs to the DEAD box helicase family
ABE41_RS10605	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ABE41_RS10610	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
ABE41_RS10615	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
ABE41_RS10620	COG0436	Aminotransferase
ABE41_RS10625	COG2814	Major facilitator Superfamily
ABE41_RS10630	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
ABE41_RS10635	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
ABE41_RS10650	COG2860	membrane
ABE41_RS10655	COG0456	acetyltransferase
ABE41_RS10660	COG3829	transcription factor binding
ABE41_RS10665	COG1509	lysine 2,3-aminomutase activity
ABE41_RS10675	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
ABE41_RS10680	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
ABE41_RS10685	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ABE41_RS10690	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ABE41_RS10695	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
ABE41_RS10720	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
ABE41_RS10725	COG0697	spore germination
ABE41_RS10730	COG0328	RNA-DNA hybrid ribonuclease activity
ABE41_RS10735	COG0328	RNA-DNA hybrid ribonuclease activity
ABE41_RS10745	COG1418	mRNA catabolic process
ABE41_RS10760	COG3093	addiction module antidote protein HigA
ABE41_RS10765	COG2996	Protein conserved in bacteria
ABE41_RS10770	COG0531	amino acid
ABE41_RS10775	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ABE41_RS10780	COG3162	membrane
ABE41_RS10785	COG1285	pathogenesis
ABE41_RS10790	COG1335	isochorismatase
ABE41_RS10800	COG0702	epimerase
ABE41_RS10815	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
ABE41_RS10820	COG2409	Drug exporters of the RND superfamily
ABE41_RS10825	COG2136	Putative SAM-dependent methyltransferase
ABE41_RS10825	COG2521	methyltransferase
ABE41_RS10830	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
ABE41_RS10835	COG0154	amidase activity
ABE41_RS10860	COG1054	Belongs to the UPF0176 family
ABE41_RS10875	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
ABE41_RS10925	COG0697	spore germination
ABE41_RS10930	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
ABE41_RS10930	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
ABE41_RS10935	COG0534	Mate efflux family protein
ABE41_RS10945	COG0018	arginyl-trna synthetase
ABE41_RS10950	COG2962	Rard protein
ABE41_RS10960	COG0508	dehydrogenase complex catalyzes the overall conversion of
ABE41_RS10980	COG1605	Chorismate mutase
ABE41_RS10980	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
ABE41_RS10990	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
ABE41_RS10995	COG0287	Prephenate dehydrogenase
ABE41_RS11005	COG0753	catalase activity
ABE41_RS11015	COG0488	(ABC) transporter
ABE41_RS11020	COG0723	plastoquinol--plastocyanin reductase activity
ABE41_RS11020	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABE41_RS11025	COG1132	(ABC) transporter
ABE41_RS11030	COG1132	(ABC) transporter
ABE41_RS11045	COG2244	polysaccharide biosynthetic process
ABE41_RS11065	COG3383	formate dehydrogenase (NAD+) activity
ABE41_RS11070	COG2427	Protein of unknown function (DUF1641)
ABE41_RS11075	COG2223	nitrite transmembrane transporter activity
ABE41_RS11080	COG0583	DNA-binding transcription factor activity
ABE41_RS11085	COG0070	glutamate synthase
ABE41_RS11085	COG0067	glutamate synthase
ABE41_RS11085	COG0069	glutamate synthase activity
ABE41_RS11090	COG0493	'glutamate synthase
ABE41_RS11095	COG1227	inorganic diphosphatase activity
ABE41_RS11100	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
ABE41_RS11105	COG4721	ABC-type cobalt transport system, permease component
ABE41_RS11110	COG1122	ATPase activity
ABE41_RS11145	COG3180	Ammonia monooxygenase
ABE41_RS11150	COG2364	Membrane
ABE41_RS11165	COG1085	galactose-1-phosphate uridylyltransferase
ABE41_RS11175	COG0463	Glycosyl transferase, family 2
ABE41_RS11200	COG0789	Transcriptional regulator
ABE41_RS11205	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
ABE41_RS11210	COG3069	C4-dicarboxylate transmembrane transporter activity
ABE41_RS11225	COG2814	Major facilitator Superfamily
ABE41_RS11235	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
ABE41_RS11240	COG3181	Tripartite tricarboxylate transporter family receptor
ABE41_RS11255	COG3290	protein histidine kinase activity
ABE41_RS11260	COG4565	transcriptional regulatory protein
ABE41_RS11270	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
ABE41_RS11275	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ABE41_RS11285	COG3764	Sortase (surface protein transpeptidase)
ABE41_RS11315	COG1733	regulation of RNA biosynthetic process
ABE41_RS11325	COG2391	methyltransferase activity
ABE41_RS11350	COG1410	methionine synthase
ABE41_RS11350	COG0646	methionine synthase
ABE41_RS11355	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
ABE41_RS11355	COG0646	methionine synthase
ABE41_RS11360	COG1648	precorrin-2 dehydrogenase activity
ABE41_RS11360	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
ABE41_RS11380	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABE41_RS11385	COG0529	Catalyzes the synthesis of activated sulfate
ABE41_RS11390	COG2046	Belongs to the sulfate adenylyltransferase family
ABE41_RS11395	COG0175	sulfate reduction
ABE41_RS11405	COG0730	response to heat
ABE41_RS11410	COG2873	o-acetylhomoserine
ABE41_RS11415	COG0583	DNA-binding transcription factor activity
ABE41_RS11425	COG1279	arginine transmembrane transporter activity
ABE41_RS11430	COG2323	membrane
ABE41_RS11435	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
ABE41_RS11440	COG1657	PFAM Prenyltransferase squalene oxidase
ABE41_RS11445	COG0579	oxidoreductase
ABE41_RS11450	COG0693	protein deglycase activity
ABE41_RS11460	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
ABE41_RS11465	COG0187	DNA topoisomerase II activity
ABE41_RS11470	COG1832	CoA-binding protein
ABE41_RS11475	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
ABE41_RS11485	COG0116	Belongs to the methyltransferase superfamily
ABE41_RS11495	COG3599	regulation of cell shape
ABE41_RS11505	COG3359	exonuclease
ABE41_RS11510	COG1111	helicase
ABE41_RS11510	COG1205	dead DEAH box helicase
ABE41_RS11520	COG0390	transport system, permease component
ABE41_RS11530	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
ABE41_RS11540	COG0156	8-amino-7-oxononanoate synthase activity
ABE41_RS11555	COG2801	Transposase and inactivated derivatives
ABE41_RS11575	COG0671	phosphoesterase, PA-phosphatase related
ABE41_RS11580	COG1054	Belongs to the UPF0176 family
ABE41_RS11590	COG2340	Cysteine-rich secretory protein family
ABE41_RS11615	COG0789	Transcriptional regulator
ABE41_RS11625	COG1393	Belongs to the ArsC family
ABE41_RS11630	COG3331	DNA recombination
ABE41_RS11635	COG4499	WXG100 protein secretion system (Wss), protein YukC
ABE41_RS11635	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ABE41_RS11640	COG3858	chitin binding
ABE41_RS11640	COG1388	LysM domain
ABE41_RS11650	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
ABE41_RS11655	COG3935	DnaD domain protein
ABE41_RS11660	COG0017	Asparaginyl-tRNA synthetase
ABE41_RS11665	COG0436	Aminotransferase
ABE41_RS11685	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ABE41_RS11685	COG1199	ATP-dependent helicase activity
ABE41_RS11695	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
ABE41_RS11710	COG0617	tRNA 3'-terminal CCA addition
ABE41_RS11715	COG0438	transferase activity, transferring glycosyl groups
ABE41_RS11720	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
ABE41_RS11725	COG1803	Methylglyoxal synthase
ABE41_RS11730	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
ABE41_RS11735	COG1694	Mazg nucleotide pyrophosphohydrolase
ABE41_RS11740	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
ABE41_RS11745	COG2738	Putative neutral zinc metallopeptidase
ABE41_RS11755	COG4347	Protein of unknown function (DUF1405)
ABE41_RS11760	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
ABE41_RS11760	COG2010	Cytochrome c
ABE41_RS11780	COG5582	Belongs to the UPF0302 family
ABE41_RS11795	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
ABE41_RS11800	COG0159	tryptophan synthase activity
ABE41_RS11805	COG0133	tryptophan synthase activity
ABE41_RS11810	COG0135	phosphoribosylanthranilate isomerase activity
ABE41_RS11815	COG0134	indole-3-glycerol-phosphate synthase activity
ABE41_RS11820	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
ABE41_RS11825	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
ABE41_RS11830	COG0105	UTP biosynthetic process
ABE41_RS11835	COG0142	geranyltranstransferase activity
ABE41_RS11840	COG1427	Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2)
ABE41_RS11845	COG0163	prenyltransferase activity
ABE41_RS11850	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
ABE41_RS11860	COG0142	geranyltranstransferase activity
ABE41_RS11870	COG0302	gtp cyclohydrolase
ABE41_RS11875	COG0776	regulation of translation
ABE41_RS11880	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
ABE41_RS11900	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
ABE41_RS11905	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
ABE41_RS11910	COG1160	GTP binding
ABE41_RS11920	COG0539	negative regulation of cytoplasmic translation
ABE41_RS11930	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
ABE41_RS11940	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
ABE41_RS11945	COG2959	enzyme of heme biosynthesis
ABE41_RS11950	COG3773	Cell wall hydrolase
ABE41_RS11950	COG3409	Peptidoglycan-binding domain 1 protein
ABE41_RS11955	COG2339	peptidase activity
ABE41_RS11960	COG0252	asparaginase activity
ABE41_RS11965	COG0492	ferredoxin-NADP+ reductase activity
ABE41_RS11970	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
ABE41_RS11975	COG1181	Belongs to the D-alanine--D-alanine ligase family
ABE41_RS11980	COG4862	establishment of competence for transformation
ABE41_RS11990	COG1408	metallophosphoesterase
ABE41_RS12005	COG1266	CAAX protease self-immunity
ABE41_RS12010	COG0514	ATP-dependent DNA helicase (RecQ)
ABE41_RS12025	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ABE41_RS12030	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
ABE41_RS12045	COG5002	protein histidine kinase activity
ABE41_RS12050	COG0745	RESPONSE REGULATOR receiver
ABE41_RS12055	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
ABE41_RS12060	COG1333	cytochrome c biogenesis protein
ABE41_RS12065	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ABE41_RS12070	COG1187	pseudouridine synthase activity
ABE41_RS12075	COG0700	Nucleoside recognition
ABE41_RS12080	COG2715	membrane protein required for spore maturation
ABE41_RS12085	COG1686	Belongs to the peptidase S11 family
ABE41_RS12090	COG1755	Isoprenylcysteine carboxyl methyltransferase
ABE41_RS12095	COG3424	synthase
ABE41_RS12105	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
ABE41_RS12115	COG1547	Domain of unknown function (DUF309)
ABE41_RS12125	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
ABE41_RS12130	COG0019	diaminopimelate decarboxylase activity
ABE41_RS12135	COG0697	spore germination
ABE41_RS12150	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
ABE41_RS12185	COG1686	Belongs to the peptidase S11 family
ABE41_RS12205	COG4974	Belongs to the 'phage' integrase family
ABE41_RS12215	COG0735	belongs to the Fur family
ABE41_RS12220	COG1300	Membrane
ABE41_RS12230	COG0494	nUDIX hydrolase
ABE41_RS12240	COG0667	Aldo Keto reductase
ABE41_RS12245	COG0183	Belongs to the thiolase family
ABE41_RS12250	COG2031	fatty acid transporter
ABE41_RS12255	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ABE41_RS12260	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
ABE41_RS12270	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ABE41_RS12285	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ABE41_RS12295	COG0398	Pfam SNARE associated Golgi protein
ABE41_RS12305	COG0860	N-Acetylmuramoyl-L-alanine amidase
ABE41_RS12320	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
ABE41_RS12330	COG0300	oxidoreductase activity
ABE41_RS12335	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABE41_RS12340	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
ABE41_RS12355	COG0584	glycerophosphoryl diester phosphodiesterase
ABE41_RS12360	COG1902	pentaerythritol trinitrate reductase activity
ABE41_RS12365	COG0671	phosphoesterase, PA-phosphatase related
ABE41_RS12370	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
ABE41_RS12380	COG1846	Transcriptional regulator
ABE41_RS12385	COG2195	Cleaves the N-terminal amino acid of tripeptides
ABE41_RS12390	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
ABE41_RS12395	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
ABE41_RS12395	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
ABE41_RS12400	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
ABE41_RS12400	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
ABE41_RS12405	COG1376	ErfK ybiS ycfS ynhG family protein
ABE41_RS12410	COG4129	membrane
ABE41_RS12415	COG1126	abc transporter atp-binding protein
ABE41_RS12420	COG0765	amino acid transport
ABE41_RS12425	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABE41_RS12440	COG0508	dehydrogenase complex catalyzes the overall conversion of
ABE41_RS12445	COG0022	dehydrogenase e1 component
ABE41_RS12450	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
ABE41_RS12455	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ABE41_RS12470	COG0280	phosphate acetyltransferase
ABE41_RS12475	COG3290	protein histidine kinase activity
ABE41_RS12475	COG3829	transcription factor binding
ABE41_RS12485	COG0745	RESPONSE REGULATOR receiver
ABE41_RS12495	COG0750	zinc metalloprotease
ABE41_RS12500	COG0497	DNA recombination
ABE41_RS12505	COG1438	arginine binding
ABE41_RS12515	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
ABE41_RS12520	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
ABE41_RS12530	COG0142	geranyltranstransferase activity
ABE41_RS12535	COG1722	exodeoxyribonuclease VII activity
ABE41_RS12540	COG1570	exodeoxyribonuclease VII activity
ABE41_RS12545	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
ABE41_RS12550	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
ABE41_RS12560	COG1302	Protein conserved in bacteria
ABE41_RS12565	COG0439	Biotin carboxylase
ABE41_RS12570	COG0511	ligase activity, forming carbon-carbon bonds
ABE41_RS12610	COG3854	ATPases associated with a variety of cellular activities
ABE41_RS12615	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
ABE41_RS12620	COG0006	proline dipeptidase activity
ABE41_RS12625	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
ABE41_RS12635	COG3872	metal-dependent enzyme
ABE41_RS12645	COG1752	Esterase of the alpha-beta hydrolase superfamily
ABE41_RS12650	COG1321	iron dependent repressor
ABE41_RS12655	COG1533	DNA photolyase activity
ABE41_RS12660	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ABE41_RS12670	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ABE41_RS12675	COG0095	Lipoate-protein ligase
ABE41_RS12680	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
ABE41_RS12690	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
ABE41_RS12700	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
ABE41_RS12715	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
ABE41_RS12740	COG4537	Required for transformation and DNA binding
ABE41_RS12745	COG1459	type II secretion system
ABE41_RS12750	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
ABE41_RS12760	COG1393	Belongs to the ArsC family
ABE41_RS12775	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABE41_RS12795	COG1368	sulfuric ester hydrolase activity
ABE41_RS12800	COG1940	carbohydrate kinase activity
ABE41_RS12805	COG4483	Protein conserved in bacteria
ABE41_RS12810	COG0697	spore germination
ABE41_RS12815	COG1363	Peptidase, m42
ABE41_RS12830	COG0746	molybdenum cofactor guanylyltransferase activity
ABE41_RS12840	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
ABE41_RS12845	COG1794	racemase activity, acting on amino acids and derivatives
ABE41_RS12860	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
ABE41_RS12885	COG0704	Plays a role in the regulation of phosphate uptake
ABE41_RS12895	COG0581	inorganic phosphate transmembrane transporter activity
ABE41_RS12900	COG0573	inorganic phosphate transmembrane transporter activity
ABE41_RS12905	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
ABE41_RS12910	COG0768	penicillin binding
ABE41_RS12915	COG0477	Major facilitator Superfamily
ABE41_RS12960	COG2839	Protein conserved in bacteria
ABE41_RS12965	COG1283	sodium-dependent phosphate transmembrane transporter activity
ABE41_RS12975	COG4086	secreted protein
ABE41_RS12980	COG1388	LysM domain
ABE41_RS12990	COG4709	membrane
ABE41_RS13000	COG0735	belongs to the Fur family
ABE41_RS13005	COG1108	ABC-type Mn2 Zn2 transport systems permease components
ABE41_RS13010	COG1121	(ABC) transporter
ABE41_RS13015	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ABE41_RS13020	COG0803	Belongs to the bacterial solute-binding protein 9 family
ABE41_RS13025	COG1108	ABC-type Mn2 Zn2 transport systems permease components
ABE41_RS13030	COG1121	(ABC) transporter
ABE41_RS13050	COG0513	Belongs to the DEAD box helicase family
ABE41_RS13060	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
ABE41_RS13070	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
ABE41_RS13075	COG2384	SAM-dependent methyltransferase
ABE41_RS13085	COG0318	PFAM AMP-dependent synthetase and ligase
ABE41_RS13090	COG1960	acyl-CoA dehydrogenase activity
ABE41_RS13095	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
ABE41_RS13100	COG0358	DNA primase activity
ABE41_RS13105	COG1671	Belongs to the UPF0178 family
ABE41_RS13110	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
ABE41_RS13115	COG0517	IMP dehydrogenase activity
ABE41_RS13120	COG1381	Involved in DNA repair and RecF pathway recombination
ABE41_RS13125	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
ABE41_RS13130	COG0295	cytidine deaminase activity
ABE41_RS13135	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
ABE41_RS13145	COG1480	7TM receptor with intracellular HD hydrolase
ABE41_RS13150	COG1702	phosphate starvation-inducible protein PhoH
ABE41_RS13175	COG1030	water channel activity
ABE41_RS13180	COG1610	YqeY-like protein
ABE41_RS13185	COG0828	Belongs to the bacterial ribosomal protein bS21 family
ABE41_RS13190	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
ABE41_RS13195	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
ABE41_RS13200	COG1385	rRNA (uridine-N3-)-methyltransferase activity
ABE41_RS13205	COG2264	protein methyltransferase activity
ABE41_RS13210	COG0484	heat shock protein binding
ABE41_RS13215	COG0443	Heat shock 70 kDa protein
ABE41_RS13220	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
ABE41_RS13225	COG1420	regulation of RNA biosynthetic process
ABE41_RS13230	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ABE41_RS13250	COG0268	Binds directly to 16S ribosomal RNA
ABE41_RS13255	COG1466	dna polymerase III delta subunit
ABE41_RS13260	COG0658	competence protein
ABE41_RS13260	COG2333	competence protein COMEC
ABE41_RS13265	COG2131	deaminase
ABE41_RS13270	COG1596	polysaccharide export
ABE41_RS13270	COG1555	photosystem II stabilization
ABE41_RS13275	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
ABE41_RS13280	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ABE41_RS13285	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ABE41_RS13290	COG1028	Short-chain dehydrogenase reductase Sdr
ABE41_RS13295	COG2610	gluconate transmembrane transporter activity
ABE41_RS13305	COG2226	methyltransferase
ABE41_RS13310	COG0799	negative regulation of ribosome biogenesis
ABE41_RS13315	COG1713	HD superfamily hydrolase involved in NAD metabolism
ABE41_RS13325	COG1534	Rna-binding protein
ABE41_RS13330	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
ABE41_RS13335	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
ABE41_RS13340	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
ABE41_RS13355	COG2111	Na H antiporter
ABE41_RS13355	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ABE41_RS13360	COG1006	Multisubunit Na H antiporter MnhC subunit
ABE41_RS13365	COG0651	ATP synthesis coupled electron transport
ABE41_RS13370	COG1863	multisubunit Na H antiporter MnhE subunit
ABE41_RS13375	COG2212	antiporter activity
ABE41_RS13380	COG1320	monovalent cation:proton antiporter activity
ABE41_RS13385	COG1183	phosphatidylcholine synthase activity
ABE41_RS13425	COG1575	Belongs to the MenA family. Type 1 subfamily
ABE41_RS13430	COG1028	Short-chain dehydrogenase reductase Sdr
ABE41_RS13445	COG0626	cystathionine gamma-synthase activity
ABE41_RS13450	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
ABE41_RS13460	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
ABE41_RS13465	COG2226	methyltransferase
ABE41_RS13470	COG4149	molybdate abc transporter
ABE41_RS13475	COG0725	ABC transporter, periplasmic molybdate-binding protein
ABE41_RS13485	COG0768	penicillin binding
ABE41_RS13495	COG0572	uridine kinase
ABE41_RS13500	COG4122	O-methyltransferase activity
ABE41_RS13505	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
ABE41_RS13515	COG3906	Belongs to the UPF0473 family
ABE41_RS13530	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
ABE41_RS13535	COG0628	permease
ABE41_RS13550	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
ABE41_RS13560	COG0482	sulfurtransferase activity
ABE41_RS13565	COG1104	cysteine desulfurase activity
ABE41_RS13570	COG1959	2 iron, 2 sulfur cluster binding
ABE41_RS13575	COG2364	Membrane
ABE41_RS13580	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
ABE41_RS13595	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
ABE41_RS13605	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
ABE41_RS13620	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ABE41_RS13625	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
ABE41_RS13630	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
ABE41_RS13630	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
ABE41_RS13645	COG2244	polysaccharide biosynthetic process
ABE41_RS13650	COG2323	membrane
ABE41_RS13660	COG1862	Preprotein translocase
ABE41_RS13665	COG0343	queuine tRNA-ribosyltransferase activity
ABE41_RS13670	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
ABE41_RS13700	COG1388	LysM domain
ABE41_RS13710	COG0157	Belongs to the NadC ModD family
ABE41_RS13715	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
ABE41_RS13720	COG1104	cysteine desulfurase activity
ABE41_RS13725	COG1827	regulation of RNA biosynthetic process
ABE41_RS13730	COG4492	Belongs to the UPF0735 family
ABE41_RS13735	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
ABE41_RS13740	COG3290	protein histidine kinase activity
ABE41_RS13750	COG2868	ribosomal protein
ABE41_RS13755	COG0261	This protein binds to 23S rRNA in the presence of protein L20
ABE41_RS13760	COG1530	ribonuclease E activity
ABE41_RS13765	COG1994	Peptidase M50
ABE41_RS13775	COG2894	cell division
ABE41_RS13780	COG0850	regulation of cytokinetic process
ABE41_RS13785	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
ABE41_RS13790	COG1792	Involved in formation and maintenance of cell shape
ABE41_RS13795	COG1077	Cell shape determining protein MreB Mrl
ABE41_RS13800	COG2003	Belongs to the UPF0758 family
ABE41_RS13820	COG3706	GGDEF domain
ABE41_RS13825	COG0285	dihydrofolate synthase activity
ABE41_RS13830	COG0525	valine-tRNA ligase activity
ABE41_RS13855	COG1388	LysM domain
ABE41_RS13860	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
ABE41_RS13865	COG0113	porphobilinogen synthase activity
ABE41_RS13875	COG0181	hydroxymethylbilane synthase activity
ABE41_RS13880	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
ABE41_RS13885	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
ABE41_RS13900	COG0218	Necessary for normal cell division and for the maintenance of normal septation
ABE41_RS13905	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
ABE41_RS13910	COG1067	ATP-dependent peptidase activity
ABE41_RS13910	COG0470	DNA polymerase III
ABE41_RS13915	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
ABE41_RS13920	COG0544	peptidyl-prolyl cis-trans isomerase activity
ABE41_RS13925	COG1477	protein flavinylation
ABE41_RS13925	COG0457	Tetratricopeptide repeat
ABE41_RS13930	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ABE41_RS13935	COG0066	3-isopropylmalate dehydratase activity
ABE41_RS13940	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
ABE41_RS13950	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ABE41_RS13960	COG0440	acetolactate synthase activity
ABE41_RS13965	COG0028	Belongs to the TPP enzyme family
ABE41_RS13970	COG0129	dihydroxy-acid dehydratase activity
ABE41_RS13990	COG0622	Phosphoesterase
ABE41_RS13995	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
ABE41_RS14000	COG5401	PFAM Sporulation and spore germination
ABE41_RS14005	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
ABE41_RS14020	COG1263	PTS System
ABE41_RS14020	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ABE41_RS14020	COG2190	(PTS) system
ABE41_RS14025	COG3711	transcriptional antiterminator
ABE41_RS14030	COG2197	response regulator
ABE41_RS14040	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
ABE41_RS14045	COG1053	succinate dehydrogenase
ABE41_RS14050	COG2009	succinate dehydrogenase
ABE41_RS14055	COG1719	4-vinyl reductase, 4VR
ABE41_RS14065	COG0322	excinuclease ABC activity
ABE41_RS14070	COG3118	belongs to the thioredoxin family
ABE41_RS14075	COG0406	alpha-ribazole phosphatase activity
ABE41_RS14080	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
ABE41_RS14085	COG2086	electron transfer activity
ABE41_RS14090	COG1024	Enoyl-CoA hydratase
ABE41_RS14095	COG1309	transcriptional regulator
ABE41_RS14100	COG0318	PFAM AMP-dependent synthetase and ligase
ABE41_RS14105	COG3766	membrane
ABE41_RS14110	COG1193	negative regulation of DNA recombination
ABE41_RS14115	COG1796	DNA polymerase
ABE41_RS14115	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
ABE41_RS14120	COG1286	toxin biosynthetic process
ABE41_RS14125	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
ABE41_RS14130	COG1039	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
ABE41_RS14135	COG0072	phenylalanine-tRNA ligase activity
ABE41_RS14135	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABE41_RS14140	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
ABE41_RS14145	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ABE41_RS14165	COG1271	oxidase subunit
ABE41_RS14170	COG1294	oxidase, subunit
ABE41_RS14175	COG3326	Membrane
ABE41_RS14180	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
ABE41_RS14185	COG0291	Belongs to the bacterial ribosomal protein bL35 family
ABE41_RS14190	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
ABE41_RS14195	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
ABE41_RS14205	COG0765	amino acid transport
ABE41_RS14210	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABE41_RS14225	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
ABE41_RS14230	COG1484	DNA-dependent DNA replication
ABE41_RS14235	COG3611	Membrane attachment protein
ABE41_RS14240	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
ABE41_RS14250	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
ABE41_RS14255	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
ABE41_RS14260	COG0237	dephospho-CoA kinase activity
ABE41_RS14265	COG1971	Probably functions as a manganese efflux pump
ABE41_RS14270	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
ABE41_RS14275	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
ABE41_RS14275	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
ABE41_RS14280	COG5002	protein histidine kinase activity
ABE41_RS14285	COG0745	RESPONSE REGULATOR receiver
ABE41_RS14295	COG0039	L-malate dehydrogenase activity
ABE41_RS14300	COG0538	isocitrate dehydrogenase activity
ABE41_RS14305	COG0372	Belongs to the citrate synthase family
ABE41_RS14315	COG0628	permease
ABE41_RS14320	COG3030	protein affecting phage T7 exclusion by the F plasmid
ABE41_RS14330	COG0205	6-phosphofructokinase activity
ABE41_RS14335	COG0825	malonyl-CoA metabolic process
ABE41_RS14340	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
ABE41_RS14345	COG1725	Transcriptional regulator
ABE41_RS14350	COG0281	malic enzyme
ABE41_RS14355	COG0587	DNA-directed DNA polymerase activity
ABE41_RS14375	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
ABE41_RS14385	COG4109	DRTGG domain
ABE41_RS14400	COG0686	Belongs to the AlaDH PNT family
ABE41_RS14405	COG0165	Argininosuccinate lyase
ABE41_RS14410	COG0137	argininosuccinate synthase activity
ABE41_RS14420	COG0521	Mo-molybdopterin cofactor biosynthetic process
ABE41_RS14425	COG2217	Heavy metal translocating P-type atpase
ABE41_RS14430	COG0456	acetyltransferase
ABE41_RS14440	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
ABE41_RS14445	COG0827	DNA restriction-modification system
ABE41_RS14450	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
ABE41_RS14455	COG3874	Sporulation protein YtfJ
ABE41_RS14465	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
ABE41_RS14470	COG1574	metal-dependent hydrolase with the TIM-barrel fold
ABE41_RS14475	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABE41_RS14485	COG0301	tRNA thio-modification
ABE41_RS14490	COG1104	cysteine desulfurase activity
ABE41_RS14495	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
ABE41_RS14500	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
ABE41_RS14505	COG1309	transcriptional regulator
ABE41_RS14510	COG1956	GAF domain-containing protein
ABE41_RS14520	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
ABE41_RS14540	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABE41_RS14545	COG0454	-acetyltransferase
ABE41_RS14550	COG0517	IMP dehydrogenase activity
ABE41_RS14555	COG0123	including yeast histone deacetylase and acetoin utilization protein
ABE41_RS14560	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
ABE41_RS14570	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
ABE41_RS14570	COG1605	Chorismate mutase
ABE41_RS14585	COG4980	gas vesicle protein
ABE41_RS14600	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
ABE41_RS14610	COG1674	ftsk spoiiie
ABE41_RS14615	COG4848	Belongs to the UPF0354 family
ABE41_RS14620	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
ABE41_RS14635	COG0840	transmembrane signaling receptor activity
ABE41_RS14640	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
ABE41_RS14645	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
ABE41_RS14650	COG1363	Peptidase, m42
ABE41_RS14655	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
ABE41_RS14660	COG0602	queuosine metabolic process
ABE41_RS14665	COG0720	synthase
ABE41_RS14680	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABE41_RS14685	COG0220	tRNA (guanine-N7-)-methyltransferase activity
ABE41_RS14695	COG0510	thiamine kinase activity
ABE41_RS14700	COG1523	belongs to the glycosyl hydrolase 13 family
ABE41_RS14710	COG1597	lipid kinase activity
ABE41_RS14725	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
ABE41_RS14735	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ABE41_RS14740	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ABE41_RS14745	COG1349	DNA-binding transcription factor activity
ABE41_RS14755	COG1187	pseudouridine synthase activity
ABE41_RS14765	COG2244	polysaccharide biosynthetic process
ABE41_RS14770	COG2081	HI0933 family
ABE41_RS14780	COG0702	epimerase
ABE41_RS14785	COG3300	MHYT domain
ABE41_RS14785	COG5001	Diguanylate cyclase
ABE41_RS14790	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
ABE41_RS14795	COG0495	leucyl-tRNA aminoacylation
ABE41_RS14805	COG2814	Major facilitator Superfamily
ABE41_RS14810	COG1242	4 iron, 4 sulfur cluster binding
ABE41_RS14815	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
ABE41_RS14825	COG2267	carboxylic ester hydrolase activity
ABE41_RS14830	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
ABE41_RS14850	COG3546	catalase activity
ABE41_RS14855	COG0671	phosphoesterase, PA-phosphatase related
ABE41_RS14860	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
ABE41_RS14865	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
ABE41_RS14870	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
ABE41_RS14875	COG2814	Major facilitator Superfamily
ABE41_RS14880	COG1309	transcriptional regulator
ABE41_RS14885	COG1506	peptidase
ABE41_RS14890	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ABE41_RS14895	COG1116	anion transmembrane transporter activity
ABE41_RS14900	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABE41_RS14905	COG0494	nUDIX hydrolase
ABE41_RS14940	COG2094	Belongs to the DNA glycosylase MPG family
ABE41_RS14950	COG1301	dicarboxylic acid transport
ABE41_RS14990	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ABE41_RS14990	COG1263	PTS System
ABE41_RS14995	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
ABE41_RS15005	COG1263	PTS System
ABE41_RS15005	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ABE41_RS15010	COG2188	Transcriptional regulator
ABE41_RS15015	COG0363	glucosamine-6-phosphate deaminase activity
ABE41_RS15020	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
ABE41_RS15025	COG3876	Protein conserved in bacteria
ABE41_RS15030	COG1472	Belongs to the glycosyl hydrolase 3 family
ABE41_RS15055	COG0582	viral genome integration into host DNA
ABE41_RS15060	COG4974	Belongs to the 'phage' integrase family
ABE41_RS15070	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
ABE41_RS15090	COG2267	carboxylic ester hydrolase activity
ABE41_RS15125	COG2514	catechol 2,3-dioxygenase activity
ABE41_RS15140	COG0693	protein deglycase activity
ABE41_RS15170	COG1609	Transcriptional regulator
ABE41_RS15175	COG1501	Belongs to the glycosyl hydrolase 31 family
ABE41_RS15185	COG0395	ABC-type sugar transport system, permease component
ABE41_RS15230	COG2270	Major facilitator Superfamily
ABE41_RS15235	COG1511	domain protein
ABE41_RS15240	COG5577	PFAM Coat F domain
ABE41_RS15270	COG2116	formate transmembrane transporter activity
ABE41_RS15275	COG0697	spore germination
ABE41_RS15280	COG1126	abc transporter atp-binding protein
ABE41_RS15285	COG0765	amino acid transport
ABE41_RS15295	COG5002	protein histidine kinase activity
ABE41_RS15320	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ABE41_RS15335	COG1979	alcohol dehydrogenase
ABE41_RS15340	COG2155	Conserved Protein
ABE41_RS15345	COG1098	S1 RNA binding domain
ABE41_RS15350	COG0367	asparagine synthase
ABE41_RS15355	COG1027	Aspartate ammonia-lyase
ABE41_RS15365	COG2267	carboxylic ester hydrolase activity
ABE41_RS15375	COG1413	lyase activity
ABE41_RS15390	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
ABE41_RS15395	COG3844	kynureninase activity
ABE41_RS15405	COG2056	Na+-H+ antiporter family
ABE41_RS15410	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
ABE41_RS15420	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
ABE41_RS15425	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
ABE41_RS15430	COG3584	3D domain protein
ABE41_RS15445	COG1252	NADH dehydrogenase
ABE41_RS15450	COG0492	ferredoxin-NADP+ reductase activity
ABE41_RS15460	COG0316	Belongs to the HesB IscA family
ABE41_RS15470	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
ABE41_RS15475	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
ABE41_RS15485	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
ABE41_RS15490	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
ABE41_RS15495	COG4844	belongs to the
ABE41_RS15500	COG1252	NADH dehydrogenase
ABE41_RS15510	COG4837	Protein of unknown function (DUF1462)
ABE41_RS15515	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
ABE41_RS15520	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
ABE41_RS15525	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
ABE41_RS15530	COG0505	Belongs to the CarA family
ABE41_RS15535	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ABE41_RS15540	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
ABE41_RS15545	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
ABE41_RS15550	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
ABE41_RS15555	COG1028	Short-chain dehydrogenase reductase Sdr
ABE41_RS15560	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ABE41_RS15565	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
ABE41_RS15570	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
ABE41_RS15575	COG0647	UMP catabolic process
ABE41_RS15585	COG2445	Protein of unknown function DUF86
ABE41_RS15610	COG4470	Protein conserved in bacteria
ABE41_RS15620	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
ABE41_RS15625	COG0739	heme binding
ABE41_RS15630	COG0733	neurotransmitter:sodium symporter activity
ABE41_RS15635	COG1757	Na H antiporter
ABE41_RS15645	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
ABE41_RS15650	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
ABE41_RS15655	COG3377	Domain of unknown function (DUF1805)
ABE41_RS15665	COG1801	Protein of unknown function DUF72
ABE41_RS15670	COG0778	Nitroreductase
ABE41_RS15700	COG0719	Fe-S assembly protein
ABE41_RS15705	COG0822	iron-sulfur transferase activity
ABE41_RS15710	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
ABE41_RS15715	COG0719	Fe-S assembly protein
ABE41_RS15720	COG0396	ATPase activity
ABE41_RS15725	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ABE41_RS15735	COG1464	Belongs to the NlpA lipoprotein family
ABE41_RS15740	COG2011	ABC-type metal ion transport system permease component
ABE41_RS15745	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
ABE41_RS15760	COG1191	sigma factor activity
ABE41_RS15770	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
ABE41_RS15785	COG0509	glycine decarboxylation via glycine cleavage system
ABE41_RS15790	COG1393	Belongs to the ArsC family
ABE41_RS15795	COG1960	acyl-CoA dehydrogenase activity
ABE41_RS15800	COG0183	Belongs to the thiolase family
ABE41_RS15805	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABE41_RS15805	COG1024	Enoyl-CoA hydratase
ABE41_RS15840	COG0528	UMP kinase activity
ABE41_RS15860	COG0668	transmembrane transport
ABE41_RS15865	COG1131	(ABC) transporter
ABE41_RS15880	COG2032	superoxide dismutase activity
ABE41_RS15885	COG3340	Belongs to the peptidase S51 family
ABE41_RS15890	COG0577	efflux transmembrane transporter activity
ABE41_RS15895	COG1136	(ABC) transporter
ABE41_RS15905	COG4187	Peptidase family M20/M25/M40
ABE41_RS15920	COG1595	DNA-templated transcription, initiation
ABE41_RS15930	COG0791	NLP P60 protein
ABE41_RS15930	COG3883	PFAM NLP P60 protein
ABE41_RS15965	COG1114	Component of the transport system for branched-chain amino acids
ABE41_RS15975	COG0586	Pfam SNARE associated Golgi protein
ABE41_RS15995	COG0011	TIGRFAM Protein of
ABE41_RS16000	COG2268	Band 7 protein
ABE41_RS16005	COG1585	Membrane protein implicated in regulation of membrane protease activity
ABE41_RS16020	COG0460	homoserine dehydrogenase
ABE41_RS16025	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
ABE41_RS16035	COG3858	chitin binding
ABE41_RS16035	COG1388	LysM domain
ABE41_RS16045	COG2309	aminopeptidase activity
ABE41_RS16065	COG2318	DinB family
ABE41_RS16075	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ABE41_RS16080	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ABE41_RS16090	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
ABE41_RS16100	COG3237	CsbD-like
ABE41_RS16105	COG1363	Peptidase, m42
ABE41_RS16120	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
ABE41_RS16125	COG0557	exoribonuclease II activity
ABE41_RS16130	COG1647	Serine aminopeptidase, S33
ABE41_RS16140	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
ABE41_RS16170	COG2096	Adenosyltransferase
ABE41_RS16185	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
ABE41_RS16195	COG1120	ATPase activity
ABE41_RS16200	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ABE41_RS16205	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
ABE41_RS16210	COG0148	phosphopyruvate hydratase activity
ABE41_RS16215	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
ABE41_RS16220	COG0149	triose-phosphate isomerase activity
ABE41_RS16225	COG0126	phosphoglycerate kinase activity
ABE41_RS16230	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
ABE41_RS16245	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
ABE41_RS16250	COG1278	Cold shock
ABE41_RS16260	COG0740	serine-type endopeptidase activity
ABE41_RS16275	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ABE41_RS16285	COG0391	Required for morphogenesis under gluconeogenic growth conditions
ABE41_RS16290	COG1660	Displays ATPase and GTPase activities
ABE41_RS16295	COG1051	belongs to the nudix hydrolase family
ABE41_RS16300	COG0492	ferredoxin-NADP+ reductase activity
ABE41_RS16305	COG0457	Tetratricopeptide repeat
ABE41_RS16310	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
ABE41_RS16310	COG0140	phosphoribosyl-ATP diphosphatase activity
ABE41_RS16315	COG0107	imidazoleglycerol-phosphate synthase activity
ABE41_RS16320	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
ABE41_RS16325	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
ABE41_RS16330	COG0131	Imidazoleglycerol-phosphate dehydratase
ABE41_RS16335	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
ABE41_RS16345	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
ABE41_RS16355	COG0387	Pfam Sodium calcium exchanger
ABE41_RS16360	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ABE41_RS16385	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ABE41_RS16395	COG0110	maltose O-acetyltransferase activity
ABE41_RS16400	COG0546	phosphoglycolate phosphatase activity
ABE41_RS16405	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
ABE41_RS16415	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
ABE41_RS16435	COG1950	PFAM Membrane protein of
ABE41_RS16440	COG1983	PspC domain protein
ABE41_RS16445	COG3595	metallopeptidase activity
ABE41_RS16475	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
ABE41_RS16480	COG0556	nucleotide-excision repair
ABE41_RS16485	COG0730	response to heat
ABE41_RS16500	COG0515	serine threonine protein kinase
ABE41_RS16500	COG1357	PFAM Pentapeptide repeats (8 copies)
ABE41_RS16520	COG0488	(ABC) transporter
ABE41_RS16540	COG2358	TRAP transporter, solute receptor (TAXI family
ABE41_RS16545	COG0783	Belongs to the Dps family
ABE41_RS16550	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ABE41_RS16555	COG0450	alkyl hydroperoxide reductase
ABE41_RS16565	COG0398	Pfam SNARE associated Golgi protein
ABE41_RS16570	COG2514	catechol 2,3-dioxygenase activity
ABE41_RS16575	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
ABE41_RS16580	COG1278	Cold shock
ABE41_RS16585	COG1366	Belongs to the anti-sigma-factor antagonist family
ABE41_RS16600	COG0531	amino acid
ABE41_RS16605	COG0697	spore germination
ABE41_RS16610	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABE41_RS16640	COG4451	ribulose bisphosphate carboxylase, small
ABE41_RS16640	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
ABE41_RS16650	COG2205	protein histidine kinase activity
ABE41_RS16655	COG5646	InterPro IPR014922
ABE41_RS16675	COG4430	Bacteriocin-protection, YdeI or OmpD-Associated
ABE41_RS16680	COG0243	molybdopterin cofactor binding
ABE41_RS16685	COG1056	cytidyltransferase-related domain
ABE41_RS16685	COG1051	belongs to the nudix hydrolase family
ABE41_RS16725	COG0456	acetyltransferase
ABE41_RS16735	COG1132	(ABC) transporter
ABE41_RS16740	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
ABE41_RS16745	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ABE41_RS16755	COG3409	Peptidoglycan-binding domain 1 protein
ABE41_RS16755	COG0793	Belongs to the peptidase S41A family
ABE41_RS16760	COG0791	NLP P60 protein
ABE41_RS16760	COG3883	PFAM NLP P60 protein
ABE41_RS16765	COG2177	Part of the ABC transporter FtsEX involved in
ABE41_RS16770	COG2884	Cell division ATP-binding protein ftsE
ABE41_RS16775	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
ABE41_RS16790	COG0805	protein transport
ABE41_RS16795	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
ABE41_RS16810	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
ABE41_RS16815	COG0653	protein targeting
ABE41_RS16825	COG1278	Cold shock
ABE41_RS16830	COG0318	PFAM AMP-dependent synthetase and ligase
ABE41_RS16850	COG1278	Cold shock
ABE41_RS16865	COG1516	flagellar protein fliS
ABE41_RS16870	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
ABE41_RS16875	COG1334	flagellar protein FlaG
ABE41_RS16880	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
ABE41_RS16880	COG2755	lipolytic protein G-D-S-L family
ABE41_RS16920	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
ABE41_RS16925	COG1699	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
ABE41_RS16935	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
ABE41_RS16940	COG4786	Flagellar basal body rod
ABE41_RS16940	COG1256	bacterial-type flagellum assembly
ABE41_RS16960	COG1040	competence protein
ABE41_RS16965	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
ABE41_RS16970	COG1307	EDD domain protein, DegV family
ABE41_RS16975	COG1940	carbohydrate kinase activity
ABE41_RS16980	COG5002	protein histidine kinase activity
ABE41_RS16995	COG1739	Uncharacterized protein family UPF0029
ABE41_RS17000	COG1316	TRANSCRIPTIONal
ABE41_RS17015	COG1368	sulfuric ester hydrolase activity
ABE41_RS17030	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ABE41_RS17035	COG2244	polysaccharide biosynthetic process
ABE41_RS17040	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
ABE41_RS17045	COG4193	domain, Protein
ABE41_RS17045	COG5263	repeat protein
ABE41_RS17050	COG4193	domain, Protein
ABE41_RS17050	COG5263	repeat protein
ABE41_RS17065	COG0653	protein targeting
ABE41_RS17085	COG1361	Conserved repeat domain
ABE41_RS17100	COG0445	tRNA wobble uridine modification
ABE41_RS17105	COG0726	polysaccharide deacetylase
ABE41_RS17125	COG1368	sulfuric ester hydrolase activity
ABE41_RS17170	COG0681	Belongs to the peptidase S26 family
ABE41_RS17205	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ABE41_RS17230	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ABE41_RS17240	COG2213	PTS system mannitol-specific
ABE41_RS17250	COG3711	transcriptional antiterminator
ABE41_RS17255	COG1070	Carbohydrate kinase
ABE41_RS17260	COG1063	alcohol dehydrogenase
ABE41_RS17265	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
ABE41_RS17275	COG1063	alcohol dehydrogenase
ABE41_RS17280	COG0395	ABC-type sugar transport system, permease component
ABE41_RS17285	COG1175	transmembrane transport
ABE41_RS17315	COG1595	DNA-templated transcription, initiation
ABE41_RS17330	COG0544	peptidyl-prolyl cis-trans isomerase activity
ABE41_RS17335	COG1388	LysM domain
ABE41_RS17335	COG0791	NLP P60 protein
ABE41_RS17345	COG0860	N-Acetylmuramoyl-L-alanine amidase
ABE41_RS17355	COG1368	sulfuric ester hydrolase activity
ABE41_RS17360	COG4990	cell redox homeostasis
ABE41_RS17395	COG0737	Belongs to the 5'-nucleotidase family
ABE41_RS17395	COG1525	nuclease
ABE41_RS17395	COG4085	toxin activity
ABE41_RS17410	COG0494	nUDIX hydrolase
ABE41_RS17425	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
ABE41_RS17440	COG5578	integral membrane protein
ABE41_RS17445	COG0395	ABC-type sugar transport system, permease component
ABE41_RS17450	COG1175	transmembrane transport
ABE41_RS17465	COG3458	cephalosporin-C deacetylase activity
ABE41_RS17480	COG3458	cephalosporin-C deacetylase activity
ABE41_RS17485	COG1737	Transcriptional regulator
ABE41_RS17515	COG0673	inositol 2-dehydrogenase activity
ABE41_RS17530	COG0673	inositol 2-dehydrogenase activity
ABE41_RS17545	COG0395	ABC-type sugar transport system, permease component
ABE41_RS17550	COG1175	transmembrane transport
ABE41_RS17555	COG1653	transport
ABE41_RS17570	COG0768	penicillin binding
ABE41_RS17575	COG1388	LysM domain
ABE41_RS17575	COG0791	NLP P60 protein
ABE41_RS17600	COG2059	Chromate
ABE41_RS17605	COG2059	Chromate
ABE41_RS17615	COG1012	belongs to the aldehyde dehydrogenase family
ABE41_RS17625	COG3069	C4-dicarboxylate transmembrane transporter activity
ABE41_RS17650	COG0165	Argininosuccinate lyase
ABE41_RS17655	COG0693	protein deglycase activity
ABE41_RS17665	COG2814	Major facilitator Superfamily
ABE41_RS17675	COG2801	Transposase and inactivated derivatives
ABE41_RS17690	COG1472	Belongs to the glycosyl hydrolase 3 family
ABE41_RS17710	COG0395	ABC-type sugar transport system, permease component
ABE41_RS17730	COG0395	ABC-type sugar transport system, permease component
ABE41_RS17735	COG1175	transmembrane transport
ABE41_RS17755	COG1609	Transcriptional regulator
ABE41_RS17785	COG0673	inositol 2-dehydrogenase activity
ABE41_RS17795	COG1940	carbohydrate kinase activity
ABE41_RS17810	COG0395	ABC-type sugar transport system, permease component
ABE41_RS17815	COG1175	transmembrane transport
ABE41_RS17820	COG1653	transport
ABE41_RS17825	COG1609	Transcriptional regulator
ABE41_RS17835	COG1482	cell wall glycoprotein biosynthetic process
ABE41_RS17840	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
ABE41_RS17845	COG1984	allophanate hydrolase subunit 2
ABE41_RS17850	COG1914	H( )-stimulated, divalent metal cation uptake system
ABE41_RS17855	COG4336	lyase activity
ABE41_RS17860	COG1295	ribonuclease BN
ABE41_RS17870	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
ABE41_RS17875	COG2610	gluconate transmembrane transporter activity
ABE41_RS17880	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
ABE41_RS17885	COG3395	kinase activity
ABE41_RS17890	COG1349	DNA-binding transcription factor activity
ABE41_RS17895	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
ABE41_RS17905	COG1929	Belongs to the glycerate kinase type-1 family
ABE41_RS17915	COG0383	alpha-mannosidase activity
ABE41_RS17920	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
ABE41_RS17920	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ABE41_RS17920	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ABE41_RS17930	COG1183	phosphatidylcholine synthase activity
ABE41_RS17935	COG1473	amidohydrolase
ABE41_RS17950	COG1012	belongs to the aldehyde dehydrogenase family
ABE41_RS17960	COG1028	Short-chain dehydrogenase reductase Sdr
ABE41_RS17965	COG0531	amino acid
ABE41_RS17980	COG0697	spore germination
ABE41_RS17985	COG0531	amino acid
ABE41_RS18005	COG0644	oxidoreductase
ABE41_RS18010	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
ABE41_RS18035	COG1378	Sugar-specific transcriptional regulator TrmB
ABE41_RS18075	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
ABE41_RS18080	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
ABE41_RS18090	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABE41_RS18105	COG0179	Fumarylacetoacetate (FAA) hydrolase
ABE41_RS18110	COG2350	Protein conserved in bacteria
ABE41_RS18125	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABE41_RS18135	COG0445	tRNA wobble uridine modification
ABE41_RS18140	COG0583	DNA-binding transcription factor activity
ABE41_RS18165	COG0737	Belongs to the 5'-nucleotidase family
ABE41_RS18175	COG3238	Protein conserved in bacteria
ABE41_RS18180	COG4670	ketone body catabolic process
ABE41_RS18185	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
ABE41_RS18185	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
ABE41_RS18190	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
ABE41_RS18195	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
ABE41_RS18205	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABE41_RS18210	COG1028	Short-chain dehydrogenase reductase Sdr
ABE41_RS18215	COG0183	Belongs to the thiolase family
ABE41_RS18225	COG1929	Belongs to the glycerate kinase type-1 family
ABE41_RS18230	COG3238	Protein conserved in bacteria
ABE41_RS18250	COG1028	Short-chain dehydrogenase reductase Sdr
ABE41_RS18255	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
ABE41_RS18260	COG0438	transferase activity, transferring glycosyl groups
ABE41_RS18285	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
ABE41_RS18290	COG4464	protein tyrosine phosphatase activity
ABE41_RS18295	COG0489	protein tyrosine kinase activity
ABE41_RS18300	COG3944	biosynthesis protein
ABE41_RS18315	COG4145	pantothenate transmembrane transporter activity
ABE41_RS18325	COG4948	Mandelate Racemase Muconate Lactonizing
ABE41_RS18330	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
ABE41_RS18340	COG1473	amidohydrolase
ABE41_RS18350	COG5578	integral membrane protein
ABE41_RS18380	COG2188	Transcriptional regulator
ABE41_RS18395	COG0395	ABC-type sugar transport system, permease component
ABE41_RS18400	COG1175	transmembrane transport
ABE41_RS18405	COG1653	transport
ABE41_RS18435	COG1366	Belongs to the anti-sigma-factor antagonist family
ABE41_RS18445	COG1388	LysM domain
ABE41_RS18445	COG0791	NLP P60 protein
ABE41_RS18465	COG2801	Transposase and inactivated derivatives
ABE41_RS18470	COG1131	(ABC) transporter
ABE41_RS18520	COG0183	Belongs to the thiolase family
ABE41_RS18525	COG0318	PFAM AMP-dependent synthetase and ligase
ABE41_RS18530	COG1268	BioY protein
ABE41_RS18595	COG4548	von Willebrand factor, type A
ABE41_RS18600	COG0714	Associated with various cellular activities
ABE41_RS18630	COG4145	pantothenate transmembrane transporter activity
ABE41_RS18650	COG3011	Protein conserved in bacteria
ABE41_RS18670	COG2207	Transcriptional regulator
ABE41_RS18670	COG3708	Transcriptional regulator
ABE41_RS18675	COG0697	spore germination
ABE41_RS18685	COG2059	Chromate
ABE41_RS18690	COG2059	Chromate
ABE41_RS18700	COG4608	Belongs to the ABC transporter superfamily
ABE41_RS18705	COG0444	Belongs to the ABC transporter superfamily
ABE41_RS18710	COG0747	negative chemotaxis
ABE41_RS18715	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABE41_RS18720	COG0601	transmembrane transport
ABE41_RS18725	COG1522	sequence-specific DNA binding
ABE41_RS18730	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
ABE41_RS18735	COG2224	Isocitrate lyase
ABE41_RS18740	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
ABE41_RS18745	COG1131	(ABC) transporter
ABE41_RS18750	COG0697	spore germination
ABE41_RS18765	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
ABE41_RS18770	COG2022	thiamine diphosphate biosynthetic process
ABE41_RS18780	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABE41_RS18785	COG0352	thiamine-phosphate diphosphorylase activity
ABE41_RS18790	COG3314	Sporulation integral membrane protein YlbJ
ABE41_RS18800	COG2340	Cysteine-rich secretory protein family
ABE41_RS18820	COG4753	response regulator
ABE41_RS18820	COG2207	Transcriptional regulator
ABE41_RS18835	COG0395	ABC-type sugar transport system, permease component
ABE41_RS18840	COG1175	transmembrane transport
ABE41_RS18855	COG1464	Belongs to the NlpA lipoprotein family
ABE41_RS18860	COG2011	ABC-type metal ion transport system permease component
ABE41_RS18865	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
ABE41_RS18880	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ABE41_RS18915	COG4786	Flagellar basal body rod
ABE41_RS18920	COG4786	Flagellar basal body rod
ABE41_RS18925	COG1077	Cell shape determining protein MreB Mrl
ABE41_RS18930	COG1609	Transcriptional regulator
ABE41_RS18935	COG0739	heme binding
ABE41_RS18940	COG2385	sporulation resulting in formation of a cellular spore
ABE41_RS18950	COG3227	Zinc metalloprotease (Elastase)
ABE41_RS18960	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
ABE41_RS18970	COG4836	Membrane
ABE41_RS18975	COG1007	ATP synthesis coupled electron transport
ABE41_RS18985	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ABE41_RS18990	COG0713	ATP synthesis coupled electron transport
ABE41_RS18995	COG0839	Belongs to the complex I subunit 6 family
ABE41_RS19000	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ABE41_RS19010	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
ABE41_RS19015	COG0649	NAD binding
ABE41_RS19020	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ABE41_RS19025	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ABE41_RS19045	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
ABE41_RS19055	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
ABE41_RS19060	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
ABE41_RS19070	COG0355	proton-transporting ATP synthase activity, rotational mechanism
ABE41_RS19075	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
ABE41_RS19080	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
ABE41_RS19085	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
ABE41_RS19090	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
ABE41_RS19095	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
ABE41_RS19105	COG0356	it plays a direct role in the translocation of protons across the membrane
ABE41_RS19125	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
ABE41_RS19135	COG1595	DNA-templated transcription, initiation
ABE41_RS19145	COG1131	(ABC) transporter
ABE41_RS19150	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
ABE41_RS19165	COG2610	gluconate transmembrane transporter activity
ABE41_RS19170	COG1737	Transcriptional regulator
ABE41_RS19185	COG0698	ribose 5-phosphate isomerase
ABE41_RS19195	COG1971	Probably functions as a manganese efflux pump
ABE41_RS19200	COG5002	protein histidine kinase activity
ABE41_RS19205	COG0009	L-threonylcarbamoyladenylate synthase
ABE41_RS19225	COG1609	Transcriptional regulator
ABE41_RS19230	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ABE41_RS19235	COG1869	D-ribose catabolic process
ABE41_RS19240	COG1129	ABC transporter
ABE41_RS19245	COG1172	Belongs to the binding-protein-dependent transport system permease family
ABE41_RS19250	COG1879	ABC-type sugar transport system periplasmic component
ABE41_RS19260	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
ABE41_RS19265	COG1733	regulation of RNA biosynthetic process
ABE41_RS19275	COG1404	Belongs to the peptidase S8 family
ABE41_RS19280	COG2258	MOSC domain
ABE41_RS19305	COG1435	thymidine kinase activity
ABE41_RS19310	COG0254	rRNA binding
ABE41_RS19315	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
ABE41_RS19320	COG1494	fructose-1,6-bisphosphatase
ABE41_RS19325	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
ABE41_RS19330	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
ABE41_RS19335	COG0191	fructose-bisphosphate aldolase activity
ABE41_RS19340	COG2204	response regulator
ABE41_RS19345	COG4821	SIS domain
ABE41_RS19355	COG2801	Transposase and inactivated derivatives
ABE41_RS19365	COG0504	CTP synthase activity
ABE41_RS19370	COG3343	RNA polymerase activity
ABE41_RS19405	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
ABE41_RS19405	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
ABE41_RS19405	COG1703	isobutyryl-CoA mutase activity
ABE41_RS19420	COG1960	acyl-CoA dehydrogenase activity
ABE41_RS19425	COG1960	acyl-CoA dehydrogenase activity
ABE41_RS19430	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABE41_RS19435	COG0183	Belongs to the thiolase family
ABE41_RS19440	COG2181	nitrate reductase activity
ABE41_RS19440	COG0247	lactate metabolic process
ABE41_RS19445	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ABE41_RS19455	COG0596	Alpha beta hydrolase
ABE41_RS19470	COG0018	arginyl-trna synthetase
ABE41_RS19480	COG2130	NADP-dependent
ABE41_RS19490	COG5002	protein histidine kinase activity
ABE41_RS19500	COG0010	Belongs to the arginase family
ABE41_RS19515	COG1115	amino acid carrier protein
ABE41_RS19520	COG0402	S-adenosylhomocysteine deaminase activity
ABE41_RS19525	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ABE41_RS19535	COG2252	PERMEase
ABE41_RS19540	COG0640	Transcriptional regulator
ABE41_RS19565	COG3465	dGTPase activity
ABE41_RS19570	COG1078	dGTPase activity
ABE41_RS19585	COG0280	phosphate acetyltransferase
ABE41_RS19590	COG4326	sporulation control protein
ABE41_RS19595	COG3253	May function as heme-dependent peroxidase
ABE41_RS19600	COG3773	Cell wall hydrolase
ABE41_RS19610	COG2363	Small membrane protein
ABE41_RS19630	COG0288	reversible hydration of carbon dioxide
ABE41_RS19645	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABE41_RS19650	COG0596	Alpha beta hydrolase
ABE41_RS19655	COG1666	GTP binding
ABE41_RS19685	COG0737	Belongs to the 5'-nucleotidase family
ABE41_RS19695	COG3689	TIGRFAM TIGR03943 family protein
ABE41_RS19700	COG0701	Predicted permease
ABE41_RS19705	COG2084	Dehydrogenase
ABE41_RS19715	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
ABE41_RS19730	COG0702	epimerase
ABE41_RS19735	COG2322	membrane
ABE41_RS19745	COG2508	Transcriptional regulator
ABE41_RS19745	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
ABE41_RS19750	COG0686	Belongs to the AlaDH PNT family
ABE41_RS19755	COG1785	Belongs to the alkaline phosphatase family
ABE41_RS19770	COG1175	transmembrane transport
ABE41_RS19780	COG1234	tRNA 3'-trailer cleavage
ABE41_RS19785	COG0647	UMP catabolic process
ABE41_RS19795	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
ABE41_RS19800	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
ABE41_RS19805	COG1078	dGTPase activity
ABE41_RS19810	COG0584	glycerophosphoryl diester phosphodiesterase
ABE41_RS19845	COG1272	protein, Hemolysin III
ABE41_RS19860	COG1309	transcriptional regulator
ABE41_RS19865	COG2816	NAD+ diphosphatase activity
ABE41_RS19870	COG0006	proline dipeptidase activity
ABE41_RS19875	COG0423	glycine-tRNA ligase activity
ABE41_RS19895	COG0667	Aldo Keto reductase
ABE41_RS19905	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ABE41_RS19905	COG1263	PTS System
ABE41_RS19905	COG2190	(PTS) system
ABE41_RS19915	COG0366	Alpha amylase catalytic
ABE41_RS19945	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
ABE41_RS19965	COG4895	conserved protein (DUF2196)
ABE41_RS19975	COG2197	response regulator
ABE41_RS19980	COG4585	Histidine kinase
ABE41_RS19985	COG4758	membrane
ABE41_RS19990	COG1842	Phage shock protein A
ABE41_RS20005	COG0386	Belongs to the glutathione peroxidase family
ABE41_RS20010	COG3314	Sporulation integral membrane protein YlbJ
ABE41_RS20015	COG1187	pseudouridine synthase activity
ABE41_RS20035	COG0753	catalase activity
ABE41_RS20050	COG5434	Belongs to the glycosyl hydrolase 28 family
ABE41_RS20060	COG1193	negative regulation of DNA recombination
ABE41_RS20065	COG0820	rRNA (adenine-C2-)-methyltransferase activity
ABE41_RS20070	COG3104	oligopeptide transport
ABE41_RS20080	COG2207	Transcriptional regulator
ABE41_RS20095	COG1960	acyl-CoA dehydrogenase activity
ABE41_RS20100	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
ABE41_RS20100	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ABE41_RS20100	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ABE41_RS20110	COG1028	Short-chain dehydrogenase reductase Sdr
ABE41_RS20115	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABE41_RS20125	COG0183	Belongs to the thiolase family
ABE41_RS20130	COG1960	acyl-CoA dehydrogenase activity
ABE41_RS20140	COG3829	transcription factor binding
ABE41_RS20140	COG3290	protein histidine kinase activity
ABE41_RS20185	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ABE41_RS20190	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
ABE41_RS20195	COG4853	Protein conserved in bacteria
ABE41_RS20200	COG4863	YycH protein
ABE41_RS20205	COG5002	protein histidine kinase activity
ABE41_RS20210	COG0745	RESPONSE REGULATOR receiver
ABE41_RS20215	COG1196	nuclear chromosome segregation
ABE41_RS20215	COG0741	lytic transglycosylase activity
ABE41_RS20215	COG0739	heme binding
ABE41_RS20245	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
ABE41_RS20255	COG0305	Participates in initiation and elongation during chromosome replication
ABE41_RS20270	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
ABE41_RS20275	COG4241	membrane
ABE41_RS20285	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
ABE41_RS20290	COG0629	single-stranded DNA binding
ABE41_RS20295	COG0360	Binds together with S18 to 16S ribosomal RNA
ABE41_RS20305	COG0012	GTP binding
ABE41_RS20310	COG4481	Protein conserved in bacteria
ABE41_RS20315	COG0668	transmembrane transport
ABE41_RS20330	COG1475	DNA binding
ABE41_RS20335	COG1192	Involved in chromosome partitioning
ABE41_RS20340	COG1475	DNA binding
ABE41_RS20345	COG0357	Ribosomal RNA small subunit methyltransferase G
ABE41_RS20350	COG0445	tRNA wobble uridine modification
ABE41_RS20355	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
ABE41_RS20360	COG1847	R3H domain protein
ABE41_RS20370	COG0594	ribonuclease P activity
ABE41_RS20375	COG0230	Belongs to the bacterial ribosomal protein bL34 family
ABE41_RS20385	COG0592	DNA-directed DNA polymerase activity
ABE41_RS20390	COG2501	S4 domain
ABE41_RS20395	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
ABE41_RS20405	COG0187	DNA topoisomerase II activity
ABE41_RS20410	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
ABE41_RS20415	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain