locus-tag class description SD28_RS00010 IPR011335 Restriction endonuclease type II-like SD28_RS00010 IPR011856 tRNA endonuclease-like domain superfamily SD28_RS00010 IPR003509 Uncharacterised protein family UPF0102 SD28_RS00015 IPR001584 Integrase, catalytic core SD28_RS00015 IPR012337 Ribonuclease H-like superfamily SD28_RS00015 IPR036397 Ribonuclease H superfamily SD28_RS00015 IPR001598 Transposase, IS30, conserved site SD28_RS00015 IPR009057 Homeobox-like domain superfamily SD28_RS00025 IPR011054 Rudiment single hybrid motif SD28_RS00025 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain SD28_RS00025 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit SD28_RS00025 IPR011761 ATP-grasp fold SD28_RS00025 IPR016185 Pre-ATP-grasp domain superfamily SD28_RS00025 IPR013815 ATP-grasp fold, subdomain 1 SD28_RS00025 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type SD28_RS00030 IPR033747 Class I PurE SD28_RS00030 IPR035893 PurE domain superfamily SD28_RS00030 IPR024694 PurE, prokaryotic type SD28_RS00030 IPR000031 PurE domain SD28_RS00035 IPR001555 Phosphoribosylglycinamide formyltransferase, active site SD28_RS00035 IPR004607 Phosphoribosylglycinamide formyltransferase SD28_RS00035 IPR036477 Formyl transferase, N-terminal domain superfamily SD28_RS00035 IPR002376 Formyl transferase, N-terminal SD28_RS00040 IPR018236 SAICAR synthetase, conserved site SD28_RS00040 IPR028923 SAICAR synthetase/ADE2, N-terminal SD28_RS00045 IPR010918 PurM-like, C-terminal domain SD28_RS00045 IPR036676 PurM-like, C-terminal domain superfamily SD28_RS00045 IPR016188 PurM-like, N-terminal domain SD28_RS00045 IPR036921 PurM-like, N-terminal domain superfamily SD28_RS00045 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase SD28_RS00050 IPR036291 NAD(P)-binding domain superfamily SD28_RS00050 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase SD28_RS00050 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SD28_RS00050 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site SD28_RS00050 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SD28_RS00065 IPR005835 Nucleotidyl transferase domain SD28_RS00065 IPR029044 Nucleotide-diphospho-sugar transferases SD28_RS00065 IPR011051 RmlC-like cupin domain superfamily SD28_RS00065 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal SD28_RS00065 IPR014710 RmlC-like jelly roll fold SD28_RS00065 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase SD28_RS00070 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone SD28_RS00070 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily SD28_RS00070 IPR001424 Superoxide dismutase, copper/zinc binding domain SD28_RS00070 IPR018152 Superoxide dismutase, copper/zinc, binding site SD28_RS00075 IPR000453 Chorismate synthase SD28_RS00075 IPR035904 Chorismate synthase AroC superfamily SD28_RS00075 IPR020541 Chorismate synthase, conserved site SD28_RS00080 IPR032816 SNARE associated Golgi protein SD28_RS00090 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain SD28_RS00090 IPR020568 Ribosomal protein S5 domain 2-type fold SD28_RS00090 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SD28_RS00090 IPR041166 LapB, rubredoxin metal binding domain SD28_RS00090 IPR004504 DNA repair protein RadA SD28_RS00090 IPR003593 AAA+ ATPase domain SD28_RS00090 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS00100 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal SD28_RS00100 IPR036291 NAD(P)-binding domain superfamily SD28_RS00100 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent SD28_RS00100 IPR013328 6-phosphogluconate dehydrogenase, domain 2 SD28_RS00100 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily SD28_RS00100 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal SD28_RS00110 IPR023298 P-type ATPase, transmembrane domain superfamily SD28_RS00110 IPR017969 Heavy-metal-associated, conserved site SD28_RS00110 IPR023214 HAD superfamily SD28_RS00110 IPR036412 HAD-like superfamily SD28_RS00110 IPR027256 P-type ATPase, subfamily IB SD28_RS00110 IPR001757 P-type ATPase SD28_RS00110 IPR008250 P-type ATPase, A domain superfamily SD28_RS00110 IPR006121 Heavy metal-associated domain, HMA SD28_RS00110 IPR036163 Heavy metal-associated domain superfamily SD28_RS00110 IPR018303 P-type ATPase, phosphorylation site SD28_RS00110 IPR023299 P-type ATPase, cytoplasmic domain N SD28_RS00115 IPR000847 Transcription regulator HTH, LysR SD28_RS00115 IPR005119 LysR, substrate-binding SD28_RS00115 IPR036390 Winged helix DNA-binding domain superfamily SD28_RS00115 IPR036388 Winged helix-like DNA-binding domain superfamily SD28_RS00125 IPR001915 Peptidase M48 SD28_RS00125 IPR022919 Peptidase M48, protease HtpX, putative SD28_RS00135 IPR020568 Ribosomal protein S5 domain 2-type fold SD28_RS00135 IPR002381 Ribonuclease PH, bacterial-type SD28_RS00135 IPR036345 Exoribonuclease, PH domain 2 superfamily SD28_RS00135 IPR015847 Exoribonuclease, phosphorolytic domain 2 SD28_RS00135 IPR001247 Exoribonuclease, phosphorolytic domain 1 SD28_RS00135 IPR018336 Ribonuclease PH, conserved site SD28_RS00135 IPR027408 PNPase/RNase PH domain superfamily SD28_RS00145 IPR039653 Prenyltransferase SD28_RS00145 IPR006370 4-hydroxybenzoate polyprenyltransferase-like SD28_RS00145 IPR030470 UbiA prenyltransferase conserved site SD28_RS00145 IPR000537 UbiA prenyltransferase family SD28_RS00160 IPR002781 Transmembrane protein TauE-like SD28_RS00165 IPR039445 Transcriptional regulator DauR-like, HTH domain SD28_RS00165 IPR039446 Transcriptional regulator DauR-like SD28_RS00165 IPR013559 YheO-like SD28_RS00175 IPR023404 Radical SAM, alpha/beta horseshoe SD28_RS00175 IPR005839 Methylthiotransferase SD28_RS00175 IPR041582 RimO, TRAM domain SD28_RS00175 IPR005840 Ribosomal protein S12 methylthiotransferase RimO SD28_RS00175 IPR002792 TRAM domain SD28_RS00175 IPR013848 Methylthiotransferase, N-terminal SD28_RS00175 IPR020612 Methylthiotransferase, conserved site SD28_RS00175 IPR006638 Elp3/MiaB/NifB SD28_RS00175 IPR007197 Radical SAM SD28_RS00175 IPR038135 Methylthiotransferase, N-terminal domain superfamily SD28_RS00180 IPR006690 Outer membrane protein, OmpA-like, conserved site SD28_RS00180 IPR006665 OmpA-like domain SD28_RS00180 IPR002368 Outer membrane protein, OmpA SD28_RS00180 IPR006664 Outer membrane protein, bacterial SD28_RS00180 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel SD28_RS00180 IPR036737 OmpA-like domain superfamily SD28_RS00180 IPR000498 Outer membrane protein OmpA-like, transmembrane domain SD28_RS00190 IPR011659 WD40-like Beta Propeller SD28_RS00190 IPR011042 Six-bladed beta-propeller, TolB-like SD28_RS00190 IPR014167 Tol-Pal system protein TolB SD28_RS00190 IPR036752 TolB, N-terminal domain superfamily SD28_RS00200 IPR014168 Tol-Pal system protein TolR SD28_RS00200 IPR003400 Biopolymer transport protein ExbD/TolR SD28_RS00205 IPR014163 Tol-Pal system, TolQ SD28_RS00205 IPR002898 MotA/TolQ/ExbB proton channel SD28_RS00215 IPR000462 CDP-alcohol phosphatidyltransferase SD28_RS00215 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase SD28_RS00220 IPR008243 Chorismate mutase, AroH class SD28_RS00220 IPR035959 RutC-like superfamily SD28_RS00225 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase SD28_RS00245 IPR000498 Outer membrane protein OmpA-like, transmembrane domain SD28_RS00245 IPR006690 Outer membrane protein, OmpA-like, conserved site SD28_RS00245 IPR006665 OmpA-like domain SD28_RS00245 IPR002368 Outer membrane protein, OmpA SD28_RS00245 IPR036737 OmpA-like domain superfamily SD28_RS00245 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel SD28_RS00245 IPR006664 Outer membrane protein, bacterial SD28_RS00250 IPR003488 DNA recombination-mediator protein A SD28_RS00250 IPR041614 DprA, winged helix domain SD28_RS00250 IPR036388 Winged helix-like DNA-binding domain superfamily SD28_RS00260 IPR013216 Methyltransferase type 11 SD28_RS00260 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SD28_RS00260 IPR010233 Ubiquinone biosynthesis O-methyltransferase SD28_RS00270 IPR027805 Transposase, Helix-turn-helix domain SD28_RS00270 IPR027806 Harbinger transposase-derived nuclease domain SD28_RS00275 IPR027805 Transposase, Helix-turn-helix domain SD28_RS00275 IPR027806 Harbinger transposase-derived nuclease domain SD28_RS00295 IPR002052 DNA methylase, N-6 adenine-specific, conserved site SD28_RS00295 IPR004556 Methyltransferase HemK-like SD28_RS00295 IPR025714 Methyltransferase domain SD28_RS00295 IPR040758 Release factor glutamine methyltransferase, N-terminal domain SD28_RS00295 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific SD28_RS00295 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SD28_RS00300 IPR000352 Peptide chain release factor class I SD28_RS00300 IPR005139 Peptide chain release factor SD28_RS00300 IPR004373 Peptide chain release factor 1 SD28_RS00305 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase SD28_RS00305 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase SD28_RS00305 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain SD28_RS00305 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal SD28_RS00305 IPR018214 Glutamyl-tRNA reductase, conserved site SD28_RS00305 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily SD28_RS00305 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily SD28_RS00305 IPR036291 NAD(P)-binding domain superfamily SD28_RS00315 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat SD28_RS00315 IPR002372 Pyrrolo-quinoline quinone repeat SD28_RS00315 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily SD28_RS00315 IPR017687 Outer membrane protein assembly factor BamB SD28_RS00315 IPR015943 WD40/YVTN repeat-like-containing domain superfamily SD28_RS00320 IPR004734 Multidrug resistance protein SD28_RS00320 IPR036259 MFS transporter superfamily SD28_RS00320 IPR020846 Major facilitator superfamily domain SD28_RS00320 IPR011701 Major facilitator superfamily SD28_RS00320 IPR004812 Drug resistance transporter Bcr/CmlA subfamily SD28_RS00325 IPR006171 TOPRIM domain SD28_RS00325 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SD28_RS00325 IPR020568 Ribosomal protein S5 domain 2-type fold SD28_RS00325 IPR013760 DNA topoisomerase, type IIA-like domain superfamily SD28_RS00325 IPR002288 DNA gyrase B subunit, C-terminal SD28_RS00325 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 SD28_RS00325 IPR018522 DNA topoisomerase, type IIA, conserved site SD28_RS00325 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative SD28_RS00325 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SD28_RS00325 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal SD28_RS00325 IPR001241 DNA topoisomerase, type IIA SD28_RS00325 IPR003594 Histidine kinase/HSP90-like ATPase SD28_RS00335 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily SD28_RS00335 IPR002502 N-acetylmuramoyl-L-alanine amidase domain SD28_RS00345 IPR013822 Signal recognition particle SRP54, helical bundle SD28_RS00345 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS00345 IPR003593 AAA+ ATPase domain SD28_RS00345 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain SD28_RS00345 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily SD28_RS00345 IPR004390 Signal-recognition particle receptor FtsY SD28_RS00345 IPR036225 SRP/SRP receptor, N-terminal SD28_RS00355 IPR035647 EF-G domain III/V-like SD28_RS00355 IPR005225 Small GTP-binding protein domain SD28_RS00355 IPR031157 Tr-type G domain, conserved site SD28_RS00355 IPR000795 Transcription factor, GTP-binding domain SD28_RS00355 IPR004161 Translation elongation factor EFTu-like, domain 2 SD28_RS00355 IPR009000 Translation protein, beta-barrel domain superfamily SD28_RS00355 IPR041732 Peptide chain release factor 3, GTP-binding domain SD28_RS00355 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily SD28_RS00355 IPR004548 Peptide chain release factor 3 SD28_RS00355 IPR032090 Peptide chain release factor 3, C-terminal SD28_RS00355 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS00360 IPR018094 Thymidylate kinase SD28_RS00360 IPR018095 Thymidylate kinase, conserved site SD28_RS00360 IPR039430 Thymidylate kinase-like domain SD28_RS00360 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS00365 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain SD28_RS00365 IPR002668 Concentrative nucleoside transporter N-terminal domain SD28_RS00365 IPR008276 Concentrative nucleoside transporter SD28_RS00365 IPR011657 Concentrative nucleoside transporter C-terminal domain SD28_RS00365 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial SD28_RS00370 IPR011343 Deoxyribose-phosphate aldolase SD28_RS00370 IPR002915 DeoC/FbaB/ lacD aldolase SD28_RS00370 IPR013785 Aldolase-type TIM barrel SD28_RS00370 IPR023649 Deoxyribose-phosphate aldolase type II SD28_RS00375 IPR010045 Phosphopentomutase SD28_RS00375 IPR006124 Metalloenzyme SD28_RS00375 IPR017850 Alkaline-phosphatase-like, core domain superfamily SD28_RS00375 IPR024052 Phosphopentomutase DeoB cap domain superfamily SD28_RS00380 IPR004619 Type III pantothenate kinase SD28_RS00385 IPR002562 3'-5' exonuclease domain SD28_RS00385 IPR008918 Helix-hairpin-helix motif, class 2 SD28_RS00385 IPR029060 PIN-like domain superfamily SD28_RS00385 IPR012337 Ribonuclease H-like superfamily SD28_RS00385 IPR036397 Ribonuclease H superfamily SD28_RS00385 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal SD28_RS00385 IPR018320 DNA polymerase 1 SD28_RS00385 IPR020045 DNA polymerase I-like, H3TH domain SD28_RS00385 IPR036279 5'-3' exonuclease, C-terminal domain superfamily SD28_RS00385 IPR019760 DNA-directed DNA polymerase, family A, conserved site SD28_RS00385 IPR001098 DNA-directed DNA polymerase, family A, palm domain SD28_RS00385 IPR002421 5'-3' exonuclease, N-terminal SD28_RS00385 IPR002298 DNA polymerase A SD28_RS00390 IPR011049 Serralysin-like metalloprotease, C-terminal SD28_RS00390 IPR003995 RTX toxin determinant A SD28_RS00390 IPR001343 RTX calcium-binding nonapeptide repeat SD28_RS00390 IPR018511 Hemolysin-type calcium-binding conserved site SD28_RS00390 IPR010566 Haemolysin-type calcium binding-related SD28_RS00410 IPR003758 Tetraacyldisaccharide 4'-kinase SD28_RS00410 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS00415 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS00415 IPR036640 ABC transporter type 1, transmembrane domain superfamily SD28_RS00415 IPR017871 ABC transporter, conserved site SD28_RS00415 IPR003439 ABC transporter-like SD28_RS00415 IPR011917 ABC transporter, lipid A export, MsbA SD28_RS00415 IPR011527 ABC transporter type 1, transmembrane domain SD28_RS00415 IPR003593 AAA+ ATPase domain SD28_RS00415 IPR039421 Type I protein exporter SD28_RS00420 IPR002646 Poly A polymerase, head domain SD28_RS00420 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain SD28_RS00420 IPR012006 tRNA nucleotidyltransferase, proteobacteria SD28_RS00430 IPR006143 RND efflux pump, membrane fusion protein SD28_RS00430 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SD28_RS00435 IPR001036 Acriflavin resistance protein SD28_RS00435 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SD28_RS00445 IPR009057 Homeobox-like domain superfamily SD28_RS00445 IPR001584 Integrase, catalytic core SD28_RS00445 IPR012337 Ribonuclease H-like superfamily SD28_RS00445 IPR001598 Transposase, IS30, conserved site SD28_RS00445 IPR036397 Ribonuclease H superfamily SD28_RS00455 IPR000620 EamA domain SD28_RS00480 IPR003660 HAMP domain SD28_RS00480 IPR003594 Histidine kinase/HSP90-like ATPase SD28_RS00480 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SD28_RS00480 IPR005467 Histidine kinase domain SD28_RS00480 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain SD28_RS00480 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily SD28_RS00480 IPR004358 Signal transduction histidine kinase-related protein, C-terminal SD28_RS00480 IPR013727 Two-component sensor kinase, N-terminal SD28_RS00485 IPR013549 Domain of unknown function DUF1731 SD28_RS00485 IPR001509 NAD-dependent epimerase/dehydratase SD28_RS00485 IPR010099 Epimerase family protein SDR39U1 SD28_RS00485 IPR036291 NAD(P)-binding domain superfamily SD28_RS00490 IPR002585 Cytochrome ubiquinol oxidase subunit 1 SD28_RS00495 IPR003317 Cytochrome ubiquinol oxidase subunit 2 SD28_RS00500 IPR003593 AAA+ ATPase domain SD28_RS00500 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS00500 IPR006321 Pilus retraction protein PilT SD28_RS00500 IPR001482 Type II/IV secretion system protein SD28_RS00505 IPR006249 Aconitase/Iron-responsive element-binding protein 2 SD28_RS00505 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 SD28_RS00505 IPR018136 Aconitase family, 4Fe-4S cluster binding site SD28_RS00505 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain SD28_RS00505 IPR036008 Aconitase, iron-sulfur domain SD28_RS00505 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain SD28_RS00505 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SD28_RS00520 IPR010723 HemN, C-terminal SD28_RS00520 IPR004559 Heme chaperone HemW-like SD28_RS00520 IPR007197 Radical SAM SD28_RS00520 IPR023404 Radical SAM, alpha/beta horseshoe SD28_RS00520 IPR034505 Anaerobic coproporphyrinogen-III oxidase SD28_RS00520 IPR006638 Elp3/MiaB/NifB SD28_RS00525 IPR026033 Azaguanine-like transporters SD28_RS00525 IPR006043 Xanthine/uracil/vitamin C permease SD28_RS00535 IPR015797 NUDIX hydrolase-like domain superfamily SD28_RS00535 IPR000086 NUDIX hydrolase domain SD28_RS00560 IPR011545 DEAD/DEAH box helicase domain SD28_RS00560 IPR033454 RecG, wedge domain SD28_RS00560 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS00560 IPR004609 ATP-dependent DNA helicase RecG SD28_RS00560 IPR012340 Nucleic acid-binding, OB-fold SD28_RS00560 IPR014001 Helicase superfamily 1/2, ATP-binding domain SD28_RS00560 IPR001650 Helicase, C-terminal SD28_RS00570 IPR026569 Ribosomal protein L28/L24 SD28_RS00570 IPR037147 Ribosomal protein L28/L24 superfamily SD28_RS00570 IPR001383 Ribosomal protein L28 SD28_RS00570 IPR034704 L28p-like SD28_RS00575 IPR038584 Ribosomal protein L33 superfamily SD28_RS00575 IPR001705 Ribosomal protein L33 SD28_RS00575 IPR018264 Ribosomal protein L33, conserved site SD28_RS00575 IPR011332 Zinc-binding ribosomal protein SD28_RS00580 IPR013033 Septum formation inhibitor MinC SD28_RS00580 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily SD28_RS00580 IPR007874 Septum formation inhibitor MinC, N-terminal SD28_RS00580 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily SD28_RS00580 IPR005526 Septum formation inhibitor MinC, C-terminal SD28_RS00580 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal SD28_RS00585 IPR025501 ATP binding protein MinD SD28_RS00585 IPR010223 ATP binding protein MinD, bacterial-type SD28_RS00585 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain SD28_RS00585 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS00590 IPR005527 Cell division topological specificity factor MinE SD28_RS00590 IPR036707 Cell division topological specificity factor MinE superfamily SD28_RS00595 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl SD28_RS00595 IPR003593 AAA+ ATPase domain SD28_RS00595 IPR003439 ABC transporter-like SD28_RS00595 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS00595 IPR017871 ABC transporter, conserved site SD28_RS00600 IPR003453 ABC transport permease subunit MlaE, Proteobacteria SD28_RS00600 IPR030802 ABC transporter permease MalE SD28_RS00605 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD SD28_RS00605 IPR003399 Mce/MlaD SD28_RS00615 IPR027302 Glutamine synthetase, N-terminal conserved site SD28_RS00615 IPR027303 Glutamine synthetase, glycine-rich site SD28_RS00615 IPR008146 Glutamine synthetase, catalytic domain SD28_RS00615 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain SD28_RS00615 IPR008147 Glutamine synthetase, beta-Grasp domain SD28_RS00615 IPR036651 Glutamine synthetase, N-terminal domain superfamily SD28_RS00620 IPR012338 Beta-lactamase/transpeptidase-like SD28_RS00620 IPR015868 Glutaminase SD28_RS00630 IPR000566 Lipocalin/cytosolic fatty-acid binding domain SD28_RS00630 IPR022272 Lipocalin family conserved site SD28_RS00630 IPR002446 Lipocalin, bacterial SD28_RS00630 IPR022271 Lipocalin, ApoD type SD28_RS00630 IPR012674 Calycin SD28_RS00645 IPR001598 Transposase, IS30, conserved site SD28_RS00645 IPR012337 Ribonuclease H-like superfamily SD28_RS00645 IPR001584 Integrase, catalytic core SD28_RS00645 IPR009057 Homeobox-like domain superfamily SD28_RS00645 IPR036397 Ribonuclease H superfamily SD28_RS00675 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial SD28_RS00675 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 SD28_RS00675 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site SD28_RS00675 IPR000924 Glutamyl/glutaminyl-tRNA synthetase SD28_RS00675 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain SD28_RS00675 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding SD28_RS00675 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SD28_RS00675 IPR033910 Glutamyl-tRNA synthetase SD28_RS00685 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit SD28_RS00685 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal SD28_RS00685 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal SD28_RS00690 IPR003593 AAA+ ATPase domain SD28_RS00690 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain SD28_RS00690 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site SD28_RS00690 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS00690 IPR005722 ATP synthase, F1 complex, beta subunit SD28_RS00690 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily SD28_RS00690 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain SD28_RS00690 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal SD28_RS00695 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site SD28_RS00695 IPR000131 ATP synthase, F1 complex, gamma subunit SD28_RS00695 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily SD28_RS00700 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain SD28_RS00700 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily SD28_RS00700 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain SD28_RS00700 IPR005294 ATP synthase, F1 complex, alpha subunit SD28_RS00700 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS00700 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain SD28_RS00700 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily SD28_RS00700 IPR000793 ATP synthase, alpha subunit, C-terminal SD28_RS00700 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily SD28_RS00700 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site SD28_RS00705 IPR020781 ATPase, OSCP/delta subunit, conserved site SD28_RS00705 IPR000711 ATPase, OSCP/delta subunit SD28_RS00705 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily SD28_RS00710 IPR005864 ATP synthase, F0 complex, subunit b, bacterial SD28_RS00710 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast SD28_RS00710 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily SD28_RS00715 IPR035921 F/V-ATP synthase subunit C superfamily SD28_RS00715 IPR002379 V-ATPase proteolipid subunit C-like domain SD28_RS00715 IPR038662 F1F0 ATP synthase subunit C superfamily SD28_RS00715 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site SD28_RS00715 IPR000454 ATP synthase, F0 complex, subunit C SD28_RS00715 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast SD28_RS00720 IPR035908 ATP synthase, F0 complex, subunit A superfamily SD28_RS00720 IPR000568 ATP synthase, F0 complex, subunit A SD28_RS00720 IPR023011 ATP synthase, F0 complex, subunit A, active site SD28_RS00735 IPR002942 RNA-binding S4 domain SD28_RS00735 IPR006145 Pseudouridine synthase, RsuA/RluA SD28_RS00735 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site SD28_RS00735 IPR006225 Pseudouridine synthase, RluC/RluD SD28_RS00735 IPR020103 Pseudouridine synthase, catalytic domain superfamily SD28_RS00735 IPR036986 RNA-binding S4 domain superfamily SD28_RS00740 IPR005654 ATPase, AFG1-like SD28_RS00740 IPR030870 Cell division protein ZapE SD28_RS00740 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS00750 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit SD28_RS00750 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain SD28_RS00750 IPR015807 Histidine-tRNA ligase SD28_RS00750 IPR004154 Anticodon-binding SD28_RS00750 IPR006195 Aminoacyl-tRNA synthetase, class II SD28_RS00750 IPR036621 Anticodon-binding domain superfamily SD28_RS00755 IPR000238 Ribosome-binding factor A SD28_RS00755 IPR015946 K homology domain-like, alpha/beta SD28_RS00755 IPR023799 Ribosome-binding factor A domain superfamily SD28_RS00755 IPR020053 Ribosome-binding factor A, conserved site SD28_RS00760 IPR009000 Translation protein, beta-barrel domain superfamily SD28_RS00760 IPR036925 Translation initiation factor IF-2, domain 3 superfamily SD28_RS00760 IPR023115 Translation initiation factor IF- 2, domain 3 SD28_RS00760 IPR015760 Translation initiation factor IF- 2 SD28_RS00760 IPR000178 Translation initiation factor aIF-2, bacterial-like SD28_RS00760 IPR005225 Small GTP-binding protein domain SD28_RS00760 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS00760 IPR006847 Translation initiation factor IF-2, N-terminal SD28_RS00760 IPR009061 Putative DNA-binding domain superfamily SD28_RS00760 IPR000795 Transcription factor, GTP-binding domain SD28_RS00765 IPR025249 KH domain, NusA-like SD28_RS00765 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical SD28_RS00765 IPR003029 S1 domain SD28_RS00765 IPR013735 Transcription factor NusA, N-terminal SD28_RS00765 IPR010214 Transcription termination factor NusA, C-terminal duplication SD28_RS00765 IPR015946 K homology domain-like, alpha/beta SD28_RS00765 IPR010213 Transcription termination factor NusA SD28_RS00765 IPR022967 RNA-binding domain, S1 SD28_RS00765 IPR004087 K Homology domain SD28_RS00765 IPR036555 NusA, N-terminal domain superfamily SD28_RS00765 IPR030842 Transcription termination/antitermination protein NusA, bacterial SD28_RS00765 IPR012340 Nucleic acid-binding, OB-fold SD28_RS00765 IPR009019 K homology domain superfamily, prokaryotic type SD28_RS00770 IPR003728 Ribosome maturation factor RimP SD28_RS00770 IPR028989 Ribosome maturation factor RimP, N-terminal SD28_RS00770 IPR035956 RimP, N-terminal domain superfamily SD28_RS00770 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily SD28_RS00770 IPR028998 Ribosome maturation factor RimP, C-terminal SD28_RS00780 IPR006361 Uroporphyrinogen decarboxylase HemE SD28_RS00780 IPR000257 Uroporphyrinogen decarboxylase (URO-D) SD28_RS00780 IPR038071 UROD/MetE-like superfamily SD28_RS00785 IPR000523 Magnesium chelatase ChlI domain SD28_RS00785 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS00785 IPR025158 Mg chelatase-related protein, C-terminal domain SD28_RS00785 IPR004482 Mg chelatase-related protein SD28_RS00785 IPR003593 AAA+ ATPase domain SD28_RS00785 IPR020568 Ribosomal protein S5 domain 2-type fold SD28_RS00790 IPR007475 Ubiquinone biosynthesis accessory factor UbiK SD28_RS00800 IPR000537 UbiA prenyltransferase family SD28_RS00800 IPR030470 UbiA prenyltransferase conserved site SD28_RS00800 IPR006369 Protohaem IX farnesyltransferase SD28_RS00805 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes SD28_RS00805 IPR014210 Cytochrome o ubiquinol oxidase subunit IV SD28_RS00810 IPR014206 Cytochrome o ubiquinol oxidase, subunit III SD28_RS00810 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle SD28_RS00810 IPR035973 Cytochrome c oxidase subunit III-like superfamily SD28_RS00810 IPR024791 Cytochrome c oxidase subunit III SD28_RS00810 IPR033946 Ubiquinol oxidase subunit III domain SD28_RS00810 IPR000298 Cytochrome c oxidase subunit III-like SD28_RS00815 IPR014207 Cytochrome o ubiquinol oxidase, subunit I SD28_RS00815 IPR023616 Cytochrome c oxidase-like, subunit I domain SD28_RS00815 IPR036927 Cytochrome c oxidase-like, subunit I superfamily SD28_RS00815 IPR000883 Cytochrome c oxidase subunit I SD28_RS00815 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site SD28_RS00820 IPR002429 Cytochrome c oxidase subunit II-like C-terminal SD28_RS00820 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily SD28_RS00820 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain SD28_RS00820 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain SD28_RS00820 IPR008972 Cupredoxin SD28_RS00820 IPR006333 Cytochrome o ubiquinol oxidase subunit II SD28_RS00820 IPR010514 COX aromatic rich motif SD28_RS00830 IPR004692 Preprotein translocase SecG subunit SD28_RS00835 IPR035990 Triosephosphate isomerase superfamily SD28_RS00835 IPR020861 Triosephosphate isomerase, active site SD28_RS00835 IPR013785 Aldolase-type TIM barrel SD28_RS00835 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic SD28_RS00835 IPR000652 Triosephosphate isomerase SD28_RS00840 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III SD28_RS00840 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II SD28_RS00840 IPR006352 Phosphoglucosamine mutase, bacterial type SD28_RS00840 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III SD28_RS00840 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I SD28_RS00840 IPR005843 Alpha-D-phosphohexomutase, C-terminal SD28_RS00840 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily SD28_RS00840 IPR005841 Alpha-D-phosphohexomutase superfamily SD28_RS00845 IPR029057 Phosphoribosyltransferase-like SD28_RS00845 IPR000836 Phosphoribosyltransferase domain SD28_RS00845 IPR005764 Adenine phosphoribosyl transferase SD28_RS00850 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain SD28_RS00850 IPR006255 Dihydrolipoamide succinyltransferase SD28_RS00850 IPR011053 Single hybrid motif SD28_RS00850 IPR004167 Peripheral subunit-binding domain SD28_RS00850 IPR036625 E3-binding domain superfamily SD28_RS00850 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site SD28_RS00850 IPR000089 Biotin/lipoyl attachment SD28_RS00850 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily SD28_RS00855 IPR005475 Transketolase-like, pyrimidine-binding domain SD28_RS00855 IPR029061 Thiamin diphosphate-binding fold SD28_RS00855 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal SD28_RS00855 IPR001017 Dehydrogenase, E1 component SD28_RS00855 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily SD28_RS00855 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain SD28_RS00855 IPR011603 2-oxoglutarate dehydrogenase E1 component SD28_RS00860 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SD28_RS00860 IPR012675 Beta-grasp domain superfamily SD28_RS00860 IPR009051 Alpha-helical ferredoxin SD28_RS00860 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein SD28_RS00860 IPR036010 2Fe-2S ferredoxin-like superfamily SD28_RS00860 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain SD28_RS00860 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SD28_RS00860 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal SD28_RS00865 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain SD28_RS00865 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily SD28_RS00865 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal SD28_RS00865 IPR011281 Succinate dehydrogenase, flavoprotein subunit SD28_RS00865 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site SD28_RS00865 IPR036188 FAD/NAD(P)-binding domain superfamily SD28_RS00865 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit SD28_RS00865 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily SD28_RS00870 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor SD28_RS00870 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit SD28_RS00870 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit SD28_RS00875 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site SD28_RS00875 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit SD28_RS00875 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit SD28_RS00875 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit SD28_RS00880 IPR016142 Citrate synthase-like, large alpha subdomain SD28_RS00880 IPR036969 Citrate synthase superfamily SD28_RS00880 IPR010953 Citrate synthase, type I SD28_RS00880 IPR002020 Citrate synthase SD28_RS00880 IPR019810 Citrate synthase active site SD28_RS00880 IPR016143 Citrate synthase-like, small alpha subdomain SD28_RS00880 IPR024176 Citrate synthase, bacterial-type SD28_RS00885 IPR036259 MFS transporter superfamily SD28_RS00885 IPR020846 Major facilitator superfamily domain SD28_RS00885 IPR011701 Major facilitator superfamily SD28_RS00885 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 SD28_RS00890 IPR001189 Manganese/iron superoxide dismutase SD28_RS00890 IPR019832 Manganese/iron superoxide dismutase, C-terminal SD28_RS00890 IPR019831 Manganese/iron superoxide dismutase, N-terminal SD28_RS00890 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily SD28_RS00890 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily SD28_RS00890 IPR019833 Manganese/iron superoxide dismutase, binding site SD28_RS00895 IPR033658 Glutaredoxin, PICOT-like SD28_RS00895 IPR014434 Monothiol glutaredoxin SD28_RS00895 IPR036249 Thioredoxin-like superfamily SD28_RS00895 IPR002109 Glutaredoxin SD28_RS00895 IPR004480 Monothiol glutaredoxin-related SD28_RS00905 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type SD28_RS00905 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal SD28_RS00905 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II SD28_RS00905 IPR006195 Aminoacyl-tRNA synthetase, class II SD28_RS00905 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) SD28_RS00905 IPR002313 Lysine-tRNA ligase, class II SD28_RS00905 IPR012340 Nucleic acid-binding, OB-fold SD28_RS00910 IPR000352 Peptide chain release factor class I SD28_RS00910 IPR005139 Peptide chain release factor SD28_RS00910 IPR004374 Peptide chain release factor 2 SD28_RS00915 IPR029479 Nitroreductase SD28_RS00915 IPR000415 Nitroreductase-like SD28_RS00935 IPR001204 Phosphate transporter SD28_RS00945 IPR003778 Carboxyltransferase domain, subdomain A and B SD28_RS00945 IPR029000 Cyclophilin-like domain superfamily SD28_RS00950 IPR005501 LamB/YcsF/PxpA-like SD28_RS00950 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel SD28_RS00960 IPR005829 Sugar transporter, conserved site SD28_RS00960 IPR004736 MFS transporter, metabolite:H symporter SD28_RS00960 IPR036259 MFS transporter superfamily SD28_RS00960 IPR011701 Major facilitator superfamily SD28_RS00960 IPR020846 Major facilitator superfamily domain SD28_RS00965 IPR006015 Universal stress protein A family SD28_RS00965 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SD28_RS00965 IPR006016 UspA SD28_RS00970 IPR005225 Small GTP-binding protein domain SD28_RS00970 IPR004161 Translation elongation factor EFTu-like, domain 2 SD28_RS00970 IPR000640 Elongation factor EFG, domain V-like SD28_RS00970 IPR006297 Elongation factor 4 SD28_RS00970 IPR035647 EF-G domain III/V-like SD28_RS00970 IPR000795 Transcription factor, GTP-binding domain SD28_RS00970 IPR035654 Elongation factor 4, domain IV SD28_RS00970 IPR013842 GTP-binding protein LepA, C-terminal SD28_RS00970 IPR038363 LepA, C-terminal domain superfamily SD28_RS00970 IPR031157 Tr-type G domain, conserved site SD28_RS00970 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS00975 IPR004506 tRNA-specific 2-thiouridylase SD28_RS00975 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SD28_RS00975 IPR023382 Adenine nucleotide alpha hydrolase-like domains SD28_RS00985 IPR023635 Peptide deformylase SD28_RS00985 IPR036821 Peptide deformylase superfamily SD28_RS00990 IPR002180 Lumazine/riboflavin synthase SD28_RS00990 IPR034964 Lumazine synthase SD28_RS00990 IPR036467 Lumazine/riboflavin synthase superfamily SD28_RS00995 IPR000926 GTP cyclohydrolase II, RibA SD28_RS00995 IPR016299 Riboflavin biosynthesis protein RibBA SD28_RS00995 IPR036144 RibA-like superfamily SD28_RS00995 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB SD28_RS00995 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily SD28_RS00995 IPR032677 GTP cyclohydrolase II SD28_RS01000 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily SD28_RS01000 IPR001783 Lumazine-binding protein SD28_RS01000 IPR026017 Lumazine-binding domain SD28_RS01000 IPR017938 Riboflavin synthase-like beta-barrel SD28_RS01005 IPR002125 Cytidine and deoxycytidylate deaminase domain SD28_RS01005 IPR016193 Cytidine deaminase-like SD28_RS01005 IPR004794 Riboflavin biosynthesis protein RibD SD28_RS01005 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal SD28_RS01005 IPR016192 APOBEC/CMP deaminase, zinc-binding SD28_RS01005 IPR011549 Riboflavin-specific deaminase, C-terminal SD28_RS01005 IPR024072 Dihydrofolate reductase-like domain superfamily SD28_RS01015 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal SD28_RS01015 IPR011342 Shikimate dehydrogenase SD28_RS01015 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase SD28_RS01015 IPR041121 SDH, C-terminal SD28_RS01015 IPR022893 Shikimate dehydrogenase family SD28_RS01015 IPR036291 NAD(P)-binding domain superfamily SD28_RS01020 IPR004101 Mur ligase, C-terminal SD28_RS01020 IPR013221 Mur ligase, central SD28_RS01020 IPR005758 UDP-N-acetylmuramate--L-alanine ligase SD28_RS01020 IPR000713 Mur ligase, N-terminal catalytic domain SD28_RS01020 IPR036615 Mur ligase, C-terminal domain superfamily SD28_RS01020 IPR036565 Mur-like, catalytic domain superfamily SD28_RS01025 IPR018063 SAM-dependent methyltransferase RsmI, conserved site SD28_RS01025 IPR008189 rRNA small subunit methyltransferase I SD28_RS01025 IPR000878 Tetrapyrrole methylase SD28_RS01025 IPR014776 Tetrapyrrole methylase, subdomain 2 SD28_RS01025 IPR014777 Tetrapyrrole methylase, subdomain 1 SD28_RS01025 IPR035996 Tetrapyrrole methylase superfamily SD28_RS01045 IPR002505 Phosphate acetyl/butaryl transferase SD28_RS01045 IPR042112 Phosphate acetyltransferase, domain 2 SD28_RS01045 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily SD28_RS01045 IPR042113 Phosphate acetyltransferase, domain 1 SD28_RS01045 IPR004614 Phosphate acetyltransferase SD28_RS01045 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS01045 IPR016475 Phosphate acetyltransferase, bacteria SD28_RS01045 IPR010766 DRTGG SD28_RS01050 IPR000890 Aliphatic acid kinase, short-chain SD28_RS01050 IPR023865 Aliphatic acid kinase, short-chain, conserved site SD28_RS01050 IPR004372 Acetate/propionate kinase SD28_RS01055 IPR011344 Single-stranded DNA-binding protein SD28_RS01055 IPR012340 Nucleic acid-binding, OB-fold SD28_RS01055 IPR000424 Primosome PriB/single-strand DNA-binding SD28_RS01060 IPR003783 Regulatory protein RecX SD28_RS01065 IPR013765 DNA recombination and repair protein RecA SD28_RS01065 IPR020584 DNA recombination/repair protein RecA, conserved site SD28_RS01065 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS01065 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain SD28_RS01065 IPR023400 DNA recombination and repair protein RecA, C-terminal SD28_RS01065 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface SD28_RS01065 IPR003593 AAA+ ATPase domain SD28_RS01070 IPR003708 Bacterial protein export chaperone SecB SD28_RS01070 IPR035958 SecB-like superfamily SD28_RS01075 IPR036873 Rhodanese-like domain superfamily SD28_RS01075 IPR001763 Rhodanese-like domain SD28_RS01085 IPR023171 Na/H antiporter domain superfamily SD28_RS01085 IPR004670 Na+/H+ antiporter NhaA SD28_RS01085 IPR029045 ClpP/crotonase-like domain superfamily SD28_RS01085 IPR002142 Peptidase S49 SD28_RS01135 IPR011060 Ribulose-phosphate binding barrel SD28_RS01135 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) SD28_RS01135 IPR013798 Indole-3-glycerol phosphate synthase SD28_RS01135 IPR001468 Indole-3-glycerol phosphate synthase, conserved site SD28_RS01135 IPR013785 Aldolase-type TIM barrel SD28_RS01140 IPR032466 Metal-dependent hydrolase SD28_RS01140 IPR011059 Metal-dependent hydrolase, composite domain superfamily SD28_RS01140 IPR002195 Dihydroorotase, conserved site SD28_RS01140 IPR004722 Dihydroorotase SD28_RS01140 IPR006680 Amidohydrolase-related SD28_RS01145 IPR002293 Amino acid/polyamine transporter I SD28_RS01150 IPR001754 Orotidine 5'-phosphate decarboxylase domain SD28_RS01150 IPR018089 Orotidine 5'-phosphate decarboxylase, active site SD28_RS01150 IPR013785 Aldolase-type TIM barrel SD28_RS01150 IPR011060 Ribulose-phosphate binding barrel SD28_RS01150 IPR014732 Orotidine 5'-phosphate decarboxylase SD28_RS01155 IPR013785 Aldolase-type TIM barrel SD28_RS01155 IPR005720 Dihydroorotate dehydrogenase domain SD28_RS01155 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 SD28_RS01155 IPR005719 Dihydroorotate dehydrogenase, class 2 SD28_RS01155 IPR001295 Dihydroorotate dehydrogenase, conserved site SD28_RS01190 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath SD28_RS01235 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily SD28_RS01235 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein SD28_RS01235 IPR036291 NAD(P)-binding domain superfamily SD28_RS01235 IPR011277 Chorismate mutase, T-protein SD28_RS01235 IPR036979 Chorismate mutase domain superfamily SD28_RS01235 IPR036263 Chorismate mutase type II superfamily SD28_RS01235 IPR003099 Prephenate dehydrogenase SD28_RS01235 IPR002701 Chorismate mutase II, prokaryotic-type SD28_RS01240 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily SD28_RS01240 IPR003732 D-aminoacyl-tRNA deacylase DTD SD28_RS01255 IPR022569 Ferredoxin, C-terminal SD28_RS01255 IPR000813 7Fe ferredoxin SD28_RS01255 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SD28_RS01255 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SD28_RS01270 IPR022958 Uncharacterised protein family UPF0294 SD28_RS01270 IPR036691 Endonuclease/exonuclease/phosphatase superfamily SD28_RS01270 IPR005135 Endonuclease/exonuclease/phosphatase SD28_RS01275 IPR004670 Na+/H+ antiporter NhaA SD28_RS01275 IPR023171 Na/H antiporter domain superfamily SD28_RS01280 IPR004736 MFS transporter, metabolite:H symporter SD28_RS01280 IPR036259 MFS transporter superfamily SD28_RS01280 IPR020846 Major facilitator superfamily domain SD28_RS01280 IPR005829 Sugar transporter, conserved site SD28_RS01280 IPR036292 Proline/betaine transporter ProP, C-terminal SD28_RS01280 IPR015041 Osmosensory transporter coiled coil SD28_RS01280 IPR005828 Major facilitator, sugar transporter-like SD28_RS01290 IPR036291 NAD(P)-binding domain superfamily SD28_RS01290 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SD28_RS01290 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site SD28_RS01290 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 SD28_RS01290 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain SD28_RS01295 IPR003593 AAA+ ATPase domain SD28_RS01295 IPR022374 Energy-dependent translational throttle protein EttA SD28_RS01295 IPR017871 ABC transporter, conserved site SD28_RS01295 IPR003439 ABC transporter-like SD28_RS01295 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS01295 IPR032781 ABC-transporter extension domain SD28_RS01305 IPR005940 Anthranilate phosphoribosyl transferase SD28_RS01305 IPR000312 Glycosyl transferase, family 3 SD28_RS01305 IPR017459 Glycosyl transferase family 3, N-terminal domain SD28_RS01305 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily SD28_RS01305 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily SD28_RS01310 IPR029062 Class I glutamine amidotransferase-like SD28_RS01310 IPR017926 Glutamine amidotransferase SD28_RS01310 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain SD28_RS01315 IPR005801 ADC synthase SD28_RS01315 IPR019999 Anthranilate synthase component I-like SD28_RS01315 IPR006805 Anthranilate synthase component I, N-terminal SD28_RS01315 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial SD28_RS01315 IPR015890 Chorismate-utilising enzyme, C-terminal SD28_RS01330 IPR022967 RNA-binding domain, S1 SD28_RS01330 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G SD28_RS01330 IPR004659 Ribonuclease E/G SD28_RS01330 IPR003029 S1 domain SD28_RS01330 IPR012340 Nucleic acid-binding, OB-fold SD28_RS01335 IPR003593 AAA+ ATPase domain SD28_RS01335 IPR001957 Chromosomal replication control, initiator DnaA SD28_RS01335 IPR020591 Chromosomal replication control, initiator DnaA-like SD28_RS01335 IPR018312 Chromosomal replication control, initiator DnaA, conserved site SD28_RS01335 IPR013317 Chromosomal replication initiator protein DnaA SD28_RS01335 IPR024633 DnaA N-terminal domain SD28_RS01335 IPR038454 DnaA, N-terminal domain superfamily SD28_RS01335 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS01335 IPR010921 Trp repressor/replication initiator SD28_RS01335 IPR013159 Chromosomal replication initiator, DnaA C-terminal SD28_RS01340 IPR022637 DNA polymerase III, beta sliding clamp, central SD28_RS01340 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal SD28_RS01340 IPR001001 DNA polymerase III, beta sliding clamp SD28_RS01340 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal SD28_RS01355 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain SD28_RS01355 IPR002082 Aspartate carbamoyltransferase SD28_RS01355 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding SD28_RS01355 IPR006130 Aspartate/ornithine carbamoyltransferase SD28_RS01355 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily SD28_RS01360 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain SD28_RS01360 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain SD28_RS01360 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily SD28_RS01360 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain SD28_RS01360 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain SD28_RS01360 IPR011607 Methylglyoxal synthase-like domain SD28_RS01360 IPR036914 Methylglyoxal synthase-like domain superfamily SD28_RS01360 IPR006275 Carbamoyl-phosphate synthase, large subunit SD28_RS01360 IPR016185 Pre-ATP-grasp domain superfamily SD28_RS01360 IPR011761 ATP-grasp fold SD28_RS01365 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain SD28_RS01365 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain SD28_RS01365 IPR029062 Class I glutamine amidotransferase-like SD28_RS01365 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily SD28_RS01365 IPR006274 Carbamoyl-phosphate synthase, small subunit SD28_RS01365 IPR017926 Glutamine amidotransferase SD28_RS01375 IPR036514 SGNH hydrolase superfamily SD28_RS01375 IPR001087 GDSL lipase/esterase SD28_RS01375 IPR010637 Sif SD28_RS01380 IPR012340 Nucleic acid-binding, OB-fold SD28_RS01380 IPR001900 Ribonuclease II/R SD28_RS01385 IPR029058 Alpha/Beta hydrolase fold SD28_RS01385 IPR003140 Phospholipase/carboxylesterase/thioesterase SD28_RS01390 IPR022418 Porphobilinogen deaminase, C-terminal SD28_RS01390 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily SD28_RS01390 IPR000860 Porphobilinogen deaminase SD28_RS01390 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site SD28_RS01390 IPR022417 Porphobilinogen deaminase, N-terminal SD28_RS01395 IPR003691 Putative fluoride ion transporter CrcB SD28_RS01410 IPR003439 ABC transporter-like SD28_RS01410 IPR003593 AAA+ ATPase domain SD28_RS01410 IPR017871 ABC transporter, conserved site SD28_RS01410 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS01425 IPR011004 Trimeric LpxA-like superfamily SD28_RS01425 IPR001451 Hexapeptide repeat SD28_RS01430 IPR029046 Lipoprotein localisation LolA/LolB/LppX SD28_RS01430 IPR004565 Outer membrane lipoprotein LolB SD28_RS01435 IPR006204 GHMP kinase N-terminal domain SD28_RS01435 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase SD28_RS01435 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SD28_RS01435 IPR013750 GHMP kinase, C-terminal domain SD28_RS01435 IPR036554 GHMP kinase, C-terminal domain superfamily SD28_RS01435 IPR020568 Ribosomal protein S5 domain 2-type fold SD28_RS01450 IPR003425 CCB3/YggT SD28_RS01455 IPR003746 Protein of unknown function DUF167 SD28_RS01455 IPR036591 YggU-like superfamily SD28_RS01455 IPR005228 Conserved hypothetical protein CHP00251 SD28_RS01465 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK SD28_RS01465 IPR041107 RimK, PreATP-grasp domain SD28_RS01465 IPR013815 ATP-grasp fold, subdomain 1 SD28_RS01465 IPR013651 ATP-grasp fold, RimK-type SD28_RS01465 IPR011761 ATP-grasp fold SD28_RS01465 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX SD28_RS01470 IPR004797 Competence protein ComEC/Rec2 SD28_RS01470 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SD28_RS01470 IPR001279 Metallo-beta-lactamase SD28_RS01470 IPR025405 Domain of unknown function DUF4131 SD28_RS01470 IPR004477 ComEC/Rec2-related protein SD28_RS01470 IPR035681 ComA-like, MBL domain SD28_RS01485 IPR023861 Chloride channel, ClcA SD28_RS01485 IPR014743 Chloride channel, core SD28_RS01485 IPR001807 Chloride channel, voltage gated SD28_RS01505 IPR002293 Amino acid/polyamine transporter I SD28_RS01535 IPR013059 Tryptophan/tyrosine transporter SD28_RS01535 IPR018227 Amino acid/polyamine transporter 2 SD28_RS01535 IPR013061 Tryptophan/tryrosine permease, conserved site SD28_RS01545 IPR006074 GTP1/OBG, conserved site SD28_RS01545 IPR014100 GTP-binding protein Obg/CgtA SD28_RS01545 IPR035101 GTP-binding protein, Obg-type SD28_RS01545 IPR036726 GTP1/OBG domain superfamily SD28_RS01545 IPR006073 GTP binding domain SD28_RS01545 IPR031167 OBG-type guanine nucleotide-binding (G) domain SD28_RS01545 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS01545 IPR006169 GTP1/OBG domain SD28_RS01550 IPR002293 Amino acid/polyamine transporter I SD28_RS01555 IPR003593 AAA+ ATPase domain SD28_RS01555 IPR011527 ABC transporter type 1, transmembrane domain SD28_RS01555 IPR003439 ABC transporter-like SD28_RS01555 IPR017871 ABC transporter, conserved site SD28_RS01555 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS01555 IPR036640 ABC transporter type 1, transmembrane domain superfamily SD28_RS01560 IPR006195 Aminoacyl-tRNA synthetase, class II SD28_RS01560 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) SD28_RS01560 IPR004524 Aspartate-tRNA ligase, type 1 SD28_RS01560 IPR004115 GAD-like domain superfamily SD28_RS01560 IPR029351 GAD domain SD28_RS01560 IPR012340 Nucleic acid-binding, OB-fold SD28_RS01560 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type SD28_RS01560 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb SD28_RS01565 IPR000125 Glycoside hydrolase, family 14A, bacterial SD28_RS01565 IPR018238 Glycoside hydrolase, family 14, conserved site SD28_RS01565 IPR017853 Glycoside hydrolase superfamily SD28_RS01565 IPR013783 Immunoglobulin-like fold SD28_RS01565 IPR001554 Glycoside hydrolase, family 14 SD28_RS01565 IPR002044 Carbohydrate binding module family 20 SD28_RS01565 IPR034835 Beta-amylase, CBM20 domain SD28_RS01575 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily SD28_RS01575 IPR010121 Pyruvate, phosphate dikinase SD28_RS01575 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding SD28_RS01575 IPR013815 ATP-grasp fold, subdomain 1 SD28_RS01575 IPR008279 PEP-utilising enzyme, mobile domain SD28_RS01575 IPR018274 PEP-utilising enzyme, active site SD28_RS01575 IPR000121 PEP-utilising enzyme, C-terminal SD28_RS01575 IPR023151 PEP-utilising enzyme, conserved site SD28_RS01575 IPR040442 Pyruvate kinase-like domain superfamily SD28_RS01575 IPR036637 Phosphohistidine domain superfamily SD28_RS01580 IPR003373 Ferrous iron transport protein B SD28_RS01580 IPR030389 FeoB-type guanine nucleotide-binding (G) domain SD28_RS01580 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain SD28_RS01580 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS01580 IPR041069 FeoB, cytosolic helical domain SD28_RS01580 IPR011640 Ferrous iron transport protein B, C-terminal SD28_RS01585 IPR013520 Exonuclease, RNase T/DNA polymerase III SD28_RS01585 IPR022894 Oligoribonuclease SD28_RS01585 IPR012337 Ribonuclease H-like superfamily SD28_RS01585 IPR036397 Ribonuclease H superfamily SD28_RS01590 IPR020599 Translation elongation factor P/YeiP SD28_RS01590 IPR008991 Translation protein SH3-like domain superfamily SD28_RS01590 IPR011768 Translation elongation factor P SD28_RS01590 IPR013852 Translation elongation factor P/YeiP, conserved site SD28_RS01590 IPR001059 Translation elongation factor P/YeiP, central SD28_RS01590 IPR014722 Ribosomal protein L2, domain 2 SD28_RS01590 IPR012340 Nucleic acid-binding, OB-fold SD28_RS01590 IPR013185 Translation elongation factor, KOW-like SD28_RS01590 IPR015365 Elongation factor P, C-terminal SD28_RS01595 IPR012902 Prokaryotic N-terminal methylation site SD28_RS01595 IPR031982 Type IV minor pilin ComP SD28_RS01600 IPR004960 Bacterial lipid A biosynthesis acyltransferase SD28_RS01600 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase SD28_RS01605 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP SD28_RS01605 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase SD28_RS01605 IPR004960 Bacterial lipid A biosynthesis acyltransferase SD28_RS01610 IPR028055 Membrane insertase YidC/Oxa1, C-terminal SD28_RS01610 IPR019998 Membrane insertase YidC SD28_RS01610 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 SD28_RS01610 IPR028053 Membrane insertase YidC, N-terminal SD28_RS01610 IPR038210 Membrane insertase YidC, periplasmic domain SD28_RS01610 IPR038221 YidC, periplasmic domain superfamily SD28_RS01615 IPR020539 Ribonuclease P, conserved site SD28_RS01615 IPR000100 Ribonuclease P SD28_RS01615 IPR020568 Ribosomal protein S5 domain 2-type fold SD28_RS01615 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SD28_RS01620 IPR020939 Ribosomal protein L34, conserved site SD28_RS01620 IPR000271 Ribosomal protein L34 SD28_RS01625 IPR018227 Amino acid/polyamine transporter 2 SD28_RS01625 IPR013061 Tryptophan/tryrosine permease, conserved site SD28_RS01625 IPR013059 Tryptophan/tyrosine transporter SD28_RS01630 IPR003682 rRNA small subunit methyltransferase G SD28_RS01630 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SD28_RS01635 IPR011078 Pyridoxal phosphate homeostasis protein SD28_RS01635 IPR001608 Alanine racemase, N-terminal SD28_RS01635 IPR029066 PLP-binding barrel SD28_RS01645 IPR035461 GmhA/DiaA SD28_RS01645 IPR004515 Phosphoheptose isomerase SD28_RS01645 IPR001347 Sugar isomerase (SIS) SD28_RS01650 IPR026592 Outer membrane protein assembly factor BamE SD28_RS01650 IPR037873 BamE-like SD28_RS01650 IPR007450 Lipoprotein SmpA/OmlA SD28_RS01655 IPR036510 Ribosomal protein S20 superfamily SD28_RS01655 IPR002583 Ribosomal protein S20 SD28_RS01660 IPR023026 Tryptophan synthase beta chain/beta chain-like SD28_RS01660 IPR006654 Tryptophan synthase, beta chain SD28_RS01660 IPR006653 Tryptophan synthase, beta chain, conserved site SD28_RS01660 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme SD28_RS01660 IPR001926 Pyridoxal-phosphate dependent enzyme SD28_RS01665 IPR002028 Tryptophan synthase, alpha chain SD28_RS01665 IPR013785 Aldolase-type TIM barrel SD28_RS01665 IPR011060 Ribulose-phosphate binding barrel SD28_RS01665 IPR018204 Tryptophan synthase, alpha chain, active site SD28_RS01675 IPR003593 AAA+ ATPase domain SD28_RS01675 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS01675 IPR003959 ATPase, AAA-type, core SD28_RS01675 IPR017730 Chaperonin ClpB SD28_RS01675 IPR019489 Clp ATPase, C-terminal SD28_RS01675 IPR036628 Clp, N-terminal domain superfamily SD28_RS01675 IPR028299 ClpA/B, conserved site 2 SD28_RS01675 IPR004176 Clp, N-terminal SD28_RS01675 IPR041546 ClpA/ClpB, AAA lid domain SD28_RS01675 IPR018368 ClpA/B, conserved site 1 SD28_RS01675 IPR001270 ClpA/B family SD28_RS01705 IPR002123 Phospholipid/glycerol acyltransferase SD28_RS01715 IPR023535 Threonylcarbamoyl-AMP synthase SD28_RS01715 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily SD28_RS01715 IPR006070 YrdC-like domain SD28_RS01720 IPR000110 Ribosomal protein S1 SD28_RS01720 IPR022967 RNA-binding domain, S1 SD28_RS01720 IPR003029 S1 domain SD28_RS01720 IPR012340 Nucleic acid-binding, OB-fold SD28_RS01725 IPR016193 Cytidine deaminase-like SD28_RS01725 IPR016192 APOBEC/CMP deaminase, zinc-binding SD28_RS01725 IPR002125 Cytidine and deoxycytidylate deaminase domain SD28_RS01725 IPR028883 tRNA-specific adenosine deaminase SD28_RS01730 IPR011761 ATP-grasp fold SD28_RS01730 IPR013815 ATP-grasp fold, subdomain 1 SD28_RS01730 IPR016185 Pre-ATP-grasp domain superfamily SD28_RS01730 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site SD28_RS01730 IPR011095 D-alanine--D-alanine ligase, C-terminal SD28_RS01730 IPR005905 D-alanine--D-alanine ligase SD28_RS01735 IPR013685 POTRA domain, FtsQ-type SD28_RS01735 IPR005548 Cell division protein FtsQ/DivIB SD28_RS01735 IPR026579 Cell division protein FtsQ SD28_RS01735 IPR034746 POTRA domain SD28_RS01740 IPR003494 SHS2 domain inserted in FtsA SD28_RS01740 IPR020823 Cell division protein FtsA SD28_RS01745 IPR003008 Tubulin/FtsZ, GTPase domain SD28_RS01745 IPR036525 Tubulin/FtsZ, GTPase domain superfamily SD28_RS01745 IPR020805 Cell division protein FtsZ, conserved site SD28_RS01745 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain SD28_RS01745 IPR008280 Tubulin/FtsZ, C-terminal SD28_RS01745 IPR000158 Cell division protein FtsZ SD28_RS01745 IPR024757 Cell division protein FtsZ, C-terminal SD28_RS01750 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal SD28_RS01750 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal SD28_RS01750 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase SD28_RS01750 IPR020568 Ribosomal protein S5 domain 2-type fold SD28_RS01755 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily SD28_RS01755 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS01755 IPR021029 DNA polymerase III, tau subunit, domain V SD28_RS01755 IPR012763 DNA polymerase III, subunit gamma/ tau SD28_RS01755 IPR022754 DNA polymerase III, gamma subunit, domain III SD28_RS01755 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal SD28_RS01755 IPR003593 AAA+ ATPase domain SD28_RS01770 IPR004680 Citrate transporter-like domain SD28_RS01775 IPR011701 Major facilitator superfamily SD28_RS01775 IPR036259 MFS transporter superfamily SD28_RS01775 IPR020846 Major facilitator superfamily domain SD28_RS01790 IPR032525 Peptidase family U32, C-terminal SD28_RS01790 IPR001539 Peptidase U32 SD28_RS01795 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SD28_RS01795 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase SD28_RS01800 IPR003423 Outer membrane efflux protein SD28_RS01800 IPR010130 Type I secretion outer membrane protein, TolC SD28_RS01810 IPR005854 Amidophosphoribosyltransferase SD28_RS01810 IPR017932 Glutamine amidotransferase type 2 domain SD28_RS01810 IPR029055 Nucleophile aminohydrolases, N-terminal SD28_RS01810 IPR029057 Phosphoribosyltransferase-like SD28_RS01810 IPR035584 Amidophosphoribosyltransferase, N-terminal SD28_RS01810 IPR000836 Phosphoribosyltransferase domain SD28_RS01815 IPR029062 Class I glutamine amidotransferase-like SD28_RS01815 IPR010918 PurM-like, C-terminal domain SD28_RS01815 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain SD28_RS01815 IPR010073 Phosphoribosylformylglycinamidine synthase PurL SD28_RS01815 IPR036676 PurM-like, C-terminal domain superfamily SD28_RS01815 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily SD28_RS01815 IPR017926 Glutamine amidotransferase SD28_RS01815 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal SD28_RS01815 IPR036921 PurM-like, N-terminal domain superfamily SD28_RS01820 IPR004769 Adenylosuccinate lyase SD28_RS01820 IPR022761 Fumarate lyase, N-terminal SD28_RS01820 IPR020557 Fumarate lyase, conserved site SD28_RS01820 IPR024083 Fumarase/histidase, N-terminal SD28_RS01820 IPR008948 L-Aspartase-like SD28_RS01820 IPR019468 Adenylosuccinate lyase C-terminal SD28_RS01820 IPR000362 Fumarate lyase family SD28_RS01835 IPR003837 Glu-tRNAGln amidotransferase C subunit SD28_RS01835 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C SD28_RS01840 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit SD28_RS01840 IPR023631 Amidase signature domain SD28_RS01840 IPR036928 Amidase signature (AS) superfamily SD28_RS01840 IPR020556 Amidase, conserved site SD28_RS01840 IPR000120 Amidase SD28_RS01845 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit SD28_RS01845 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E SD28_RS01845 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic SD28_RS01845 IPR018027 Asn/Gln amidotransferase SD28_RS01845 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like SD28_RS01845 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 SD28_RS01845 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 SD28_RS01845 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site SD28_RS01845 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain SD28_RS01855 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 SD28_RS01855 IPR036259 MFS transporter superfamily SD28_RS01855 IPR011701 Major facilitator superfamily SD28_RS01865 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like SD28_RS01865 IPR022770 Ferric iron reductase FhuF domain SD28_RS01865 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal SD28_RS01870 IPR031043 Putative histamine N-monooxygenase SD28_RS01870 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase SD28_RS01870 IPR036188 FAD/NAD(P)-binding domain superfamily SD28_RS01875 IPR022770 Ferric iron reductase FhuF domain SD28_RS01875 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like SD28_RS01875 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal SD28_RS01880 IPR015424 Pyridoxal phosphate-dependent transferase SD28_RS01880 IPR021115 Pyridoxal-phosphate binding site SD28_RS01880 IPR015421 Pyridoxal phosphate-dependent transferase, major domain SD28_RS01880 IPR002129 Pyridoxal phosphate-dependent decarboxylase SD28_RS01885 IPR015424 Pyridoxal phosphate-dependent transferase SD28_RS01885 IPR004637 2,4-diaminobutyrate 4-transaminase SD28_RS01885 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 SD28_RS01885 IPR005814 Aminotransferase class-III SD28_RS01885 IPR015421 Pyridoxal phosphate-dependent transferase, major domain SD28_RS01890 IPR002912 ACT domain SD28_RS01890 IPR001048 Aspartate/glutamate/uridylate kinase SD28_RS01890 IPR041745 Lysine-sensitive aspartokinase 3, N-terminal catalytic domain SD28_RS01890 IPR018042 Aspartate kinase, conserved site SD28_RS01890 IPR001341 Aspartate kinase SD28_RS01890 IPR005260 Aspartate kinase, monofunctional class SD28_RS01890 IPR036393 Acetylglutamate kinase-like superfamily SD28_RS01895 IPR036390 Winged helix DNA-binding domain superfamily SD28_RS01895 IPR002481 Ferric-uptake regulator SD28_RS01895 IPR036388 Winged helix-like DNA-binding domain superfamily SD28_RS01940 IPR009614 Toxin YoeB SD28_RS01940 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily SD28_RS01945 IPR036165 YefM-like superfamily SD28_RS01945 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM SD28_RS01950 IPR024937 Domain X SD28_RS01950 IPR000477 Reverse transcriptase domain SD28_RS01955 IPR000477 Reverse transcriptase domain SD28_RS01955 IPR024937 Domain X SD28_RS01965 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily SD28_RS01965 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 SD28_RS01965 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid SD28_RS01970 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit SD28_RS01970 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit SD28_RS01975 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site SD28_RS01975 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily SD28_RS01975 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit SD28_RS01975 IPR010218 NADH dehydrogenase, subunit C SD28_RS01980 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site SD28_RS01980 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H SD28_RS01980 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily SD28_RS01980 IPR001135 NADH-quinone oxidoreductase, subunit D SD28_RS01980 IPR029014 [NiFe]-hydrogenase, large subunit SD28_RS01985 IPR036249 Thioredoxin-like superfamily SD28_RS01985 IPR042128 NuoE domain SD28_RS01985 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal SD28_RS01985 IPR002023 NADH-quinone oxidoreductase subunit E-like SD28_RS01990 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain SD28_RS01990 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain SD28_RS01990 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily SD28_RS01990 IPR019554 Soluble ligand binding domain SD28_RS01990 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily SD28_RS01990 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site SD28_RS01990 IPR011537 NADH ubiquinone oxidoreductase, F subunit SD28_RS01995 IPR010228 NADH:ubiquinone oxidoreductase, subunit G SD28_RS01995 IPR036010 2Fe-2S ferredoxin-like superfamily SD28_RS01995 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain SD28_RS01995 IPR006656 Molybdopterin oxidoreductase SD28_RS01995 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain SD28_RS01995 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site SD28_RS01995 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal SD28_RS01995 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding SD28_RS02000 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site SD28_RS02000 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H SD28_RS02005 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SD28_RS02005 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SD28_RS02005 IPR010226 NADH-quinone oxidoreductase, chain I SD28_RS02010 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ SD28_RS02010 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 SD28_RS02015 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like SD28_RS02015 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K SD28_RS02020 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal SD28_RS02020 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit SD28_RS02020 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup SD28_RS02020 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 SD28_RS02025 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal SD28_RS02025 IPR010227 NADH-quinone oxidoreductase, chain M/4 SD28_RS02025 IPR003918 NADH:ubiquinone oxidoreductase SD28_RS02025 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit SD28_RS02030 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit SD28_RS02030 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 SD28_RS02045 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD SD28_RS02045 IPR018357 Hexapeptide transferase, conserved site SD28_RS02045 IPR001451 Hexapeptide repeat SD28_RS02045 IPR011004 Trimeric LpxA-like superfamily SD28_RS02045 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region SD28_RS02055 IPR004625 Pyridoxine kinase SD28_RS02055 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase SD28_RS02055 IPR029056 Ribokinase-like SD28_RS02055 IPR023685 Pyridoxal kinase PdxY SD28_RS02065 IPR041628 ChlI/MoxR, AAA lid domain SD28_RS02065 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS02065 IPR011703 ATPase, AAA-3 SD28_RS02080 IPR024163 Aerotolerance regulator, N-terminal SD28_RS02080 IPR022933 Uncharacterised protein family UPF0353 SD28_RS02080 IPR036465 von Willebrand factor A-like domain superfamily SD28_RS02080 IPR002035 von Willebrand factor, type A SD28_RS02085 IPR022933 Uncharacterised protein family UPF0353 SD28_RS02085 IPR002035 von Willebrand factor, type A SD28_RS02085 IPR036465 von Willebrand factor A-like domain superfamily SD28_RS02085 IPR024163 Aerotolerance regulator, N-terminal SD28_RS02115 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm SD28_RS02115 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SD28_RS02115 IPR002303 Valine-tRNA ligase SD28_RS02115 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site SD28_RS02115 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain SD28_RS02115 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily SD28_RS02115 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding SD28_RS02115 IPR002300 Aminoacyl-tRNA synthetase, class Ia SD28_RS02115 IPR033705 Valyl tRNA synthetase, anticodon-binding domain SD28_RS02115 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding SD28_RS02115 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm SD28_RS02130 IPR016193 Cytidine deaminase-like SD28_RS02130 IPR002695 Bifunctional purine biosynthesis protein PurH-like SD28_RS02130 IPR011607 Methylglyoxal synthase-like domain SD28_RS02130 IPR024051 AICAR transformylase, duplicated domain superfamily SD28_RS02130 IPR036914 Methylglyoxal synthase-like domain superfamily SD28_RS02140 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS02140 IPR018220 Adenylosuccinate synthase, GTP-binding site SD28_RS02140 IPR033128 Adenylosuccinate synthase, active site SD28_RS02140 IPR042109 Adenylosuccinate synthetase, domain 1 SD28_RS02140 IPR001114 Adenylosuccinate synthetase SD28_RS02140 IPR042111 Adenylosuccinate synthetase, domain 3 SD28_RS02140 IPR042110 Adenylosuccinate synthetase, domain 2 SD28_RS02145 IPR000836 Phosphoribosyltransferase domain SD28_RS02145 IPR005904 Hypoxanthine phosphoribosyl transferase SD28_RS02145 IPR029057 Phosphoribosyltransferase-like SD28_RS02155 IPR036188 FAD/NAD(P)-binding domain superfamily SD28_RS02155 IPR002938 FAD-binding domain SD28_RS02160 IPR001626 ABC transporter, TroCD-like SD28_RS02160 IPR037294 ABC transporter, BtuC-like SD28_RS02165 IPR003593 AAA+ ATPase domain SD28_RS02165 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA SD28_RS02165 IPR008995 Molybdate/tungstate binding, C-terminal SD28_RS02165 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS02165 IPR017871 ABC transporter, conserved site SD28_RS02165 IPR003439 ABC transporter-like SD28_RS02165 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit SD28_RS02165 IPR013611 Transport-associated OB, type 2 SD28_RS02175 IPR020846 Major facilitator superfamily domain SD28_RS02175 IPR004638 Drug resistance transporter EmrB-like SD28_RS02175 IPR036259 MFS transporter superfamily SD28_RS02175 IPR011701 Major facilitator superfamily SD28_RS02185 IPR001226 Flavodoxin, conserved site SD28_RS02185 IPR005025 NADPH-dependent FMN reductase-like SD28_RS02185 IPR008254 Flavodoxin/nitric oxide synthase SD28_RS02185 IPR010089 Flavoprotein WrbA-like SD28_RS02185 IPR029039 Flavoprotein-like superfamily SD28_RS02190 IPR023679 Uncharacterised protein family UPF0761, bacterial SD28_RS02190 IPR017039 Virulence factor BrkB SD28_RS02200 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain SD28_RS02200 IPR041222 Primosomal protein N', 3' DNA-binding domain SD28_RS02200 IPR005259 Primosomal protein N' SD28_RS02200 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS02200 IPR041236 Primosomal protein N, C-terminal domain SD28_RS02200 IPR014001 Helicase superfamily 1/2, ATP-binding domain SD28_RS02200 IPR011545 DEAD/DEAH box helicase domain SD28_RS02200 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily SD28_RS02200 IPR001650 Helicase, C-terminal SD28_RS02225 IPR003317 Cytochrome ubiquinol oxidase subunit 2 SD28_RS02230 IPR002585 Cytochrome ubiquinol oxidase subunit 1 SD28_RS02235 IPR011701 Major facilitator superfamily SD28_RS02235 IPR020846 Major facilitator superfamily domain SD28_RS02235 IPR036259 MFS transporter superfamily SD28_RS02240 IPR001796 Dihydrofolate reductase domain SD28_RS02240 IPR024072 Dihydrofolate reductase-like domain superfamily SD28_RS02240 IPR012259 Dihydrofolate reductase SD28_RS02240 IPR017925 Dihydrofolate reductase conserved site SD28_RS02250 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid SD28_RS02250 IPR018130 Ribosomal protein S2, conserved site SD28_RS02250 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily SD28_RS02250 IPR001865 Ribosomal protein S2 SD28_RS02255 IPR001816 Translation elongation factor EFTs/EF1B SD28_RS02255 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation SD28_RS02255 IPR018101 Translation elongation factor Ts, conserved site SD28_RS02255 IPR009060 UBA-like superfamily SD28_RS02255 IPR036402 Elongation factor Ts, dimerisation domain superfamily SD28_RS02260 IPR036393 Acetylglutamate kinase-like superfamily SD28_RS02260 IPR011817 Uridylate kinase SD28_RS02260 IPR015963 Uridylate kinase, bacteria SD28_RS02260 IPR001048 Aspartate/glutamate/uridylate kinase SD28_RS02265 IPR036191 RRF superfamily SD28_RS02265 IPR023584 Ribosome recycling factor domain SD28_RS02265 IPR002661 Ribosome recycling factor SD28_RS02270 IPR036424 Decaprenyl diphosphate synthase-like superfamily SD28_RS02270 IPR001441 Decaprenyl diphosphate synthase-like SD28_RS02270 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site SD28_RS02275 IPR000374 Phosphatidate cytidylyltransferase SD28_RS02280 IPR033704 dUTPase, trimeric SD28_RS02280 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase SD28_RS02280 IPR029054 dUTPase-like SD28_RS02280 IPR036157 dUTPase-like superfamily SD28_RS02285 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial SD28_RS02285 IPR000462 CDP-alcohol phosphatidyltransferase SD28_RS02285 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase SD28_RS02290 IPR006032 Ribosomal protein S12/S23 SD28_RS02290 IPR005679 Ribosomal protein S12, bacterial-type SD28_RS02290 IPR012340 Nucleic acid-binding, OB-fold SD28_RS02295 IPR005717 Ribosomal protein S7, bacterial/organellar-type SD28_RS02295 IPR036823 Ribosomal protein S7 domain superfamily SD28_RS02295 IPR023798 Ribosomal protein S7 domain SD28_RS02295 IPR020606 Ribosomal protein S7, conserved site SD28_RS02295 IPR000235 Ribosomal protein S5/S7 SD28_RS02300 IPR000640 Elongation factor EFG, domain V-like SD28_RS02300 IPR035649 EFG, domain V SD28_RS02300 IPR009000 Translation protein, beta-barrel domain superfamily SD28_RS02300 IPR031157 Tr-type G domain, conserved site SD28_RS02300 IPR004161 Translation elongation factor EFTu-like, domain 2 SD28_RS02300 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SD28_RS02300 IPR041095 Elongation Factor G, domain II SD28_RS02300 IPR009022 Elongation factor G, domain III SD28_RS02300 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS02300 IPR020568 Ribosomal protein S5 domain 2-type fold SD28_RS02300 IPR035647 EF-G domain III/V-like SD28_RS02300 IPR005517 Translation elongation factor EFG/EF2, domain IV SD28_RS02300 IPR004540 Translation elongation factor EFG/EF2 SD28_RS02300 IPR000795 Transcription factor, GTP-binding domain SD28_RS02300 IPR005225 Small GTP-binding protein domain SD28_RS02305 IPR036838 Ribosomal protein S10 domain superfamily SD28_RS02305 IPR027486 Ribosomal protein S10 domain SD28_RS02305 IPR001848 Ribosomal protein S10 SD28_RS02310 IPR019926 Ribosomal protein L3, conserved site SD28_RS02310 IPR009000 Translation protein, beta-barrel domain superfamily SD28_RS02310 IPR019927 Ribosomal protein L3, bacterial/organelle-type SD28_RS02310 IPR000597 Ribosomal protein L3 SD28_RS02315 IPR013005 50S ribosomal protein uL4 SD28_RS02315 IPR023574 Ribosomal protein L4 domain superfamily SD28_RS02315 IPR002136 Ribosomal protein L4/L1e SD28_RS02320 IPR012678 Ribosomal protein L23/L15e core domain superfamily SD28_RS02320 IPR001014 Ribosomal protein L23/L25, conserved site SD28_RS02320 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily SD28_RS02320 IPR013025 Ribosomal protein L25/L23 SD28_RS02325 IPR014726 Ribosomal protein L2, domain 3 SD28_RS02325 IPR008991 Translation protein SH3-like domain superfamily SD28_RS02325 IPR005880 Ribosomal protein L2, bacterial/organellar-type SD28_RS02325 IPR002171 Ribosomal protein L2 SD28_RS02325 IPR022666 Ribosomal Proteins L2, RNA binding domain SD28_RS02325 IPR012340 Nucleic acid-binding, OB-fold SD28_RS02325 IPR022669 Ribosomal protein L2, C-terminal SD28_RS02325 IPR022671 Ribosomal protein L2, conserved site SD28_RS02325 IPR014722 Ribosomal protein L2, domain 2 SD28_RS02330 IPR002222 Ribosomal protein S19/S15 SD28_RS02330 IPR023575 Ribosomal protein S19, superfamily SD28_RS02330 IPR020934 Ribosomal protein S19 conserved site SD28_RS02330 IPR005732 Ribosomal protein S19, bacterial-type SD28_RS02335 IPR018260 Ribosomal protein L22/L17, conserved site SD28_RS02335 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type SD28_RS02335 IPR036394 Ribosomal protein L22/L17 superfamily SD28_RS02335 IPR001063 Ribosomal protein L22/L17 SD28_RS02340 IPR004087 K Homology domain SD28_RS02340 IPR015946 K homology domain-like, alpha/beta SD28_RS02340 IPR005704 Ribosomal protein S3, bacterial-type SD28_RS02340 IPR018280 Ribosomal protein S3, conserved site SD28_RS02340 IPR036419 Ribosomal protein S3, C-terminal domain superfamily SD28_RS02340 IPR009019 K homology domain superfamily, prokaryotic type SD28_RS02340 IPR001351 Ribosomal protein S3, C-terminal SD28_RS02340 IPR004044 K Homology domain, type 2 SD28_RS02345 IPR020798 Ribosomal protein L16, conserved site SD28_RS02345 IPR000114 Ribosomal protein L16 SD28_RS02345 IPR016180 Ribosomal protein L10e/L16 SD28_RS02345 IPR036920 Ribosomal protein L10e/L16 superfamily SD28_RS02350 IPR036049 Ribosomal protein L29/L35 superfamily SD28_RS02350 IPR001854 Ribosomal protein L29/L35 SD28_RS02350 IPR018254 Ribosomal protein L29, conserved site SD28_RS02355 IPR012340 Nucleic acid-binding, OB-fold SD28_RS02355 IPR019984 30S ribosomal protein S17 SD28_RS02355 IPR000266 Ribosomal protein S17/S11 SD28_RS02360 IPR005745 Ribosomal protein L14P, bacterial-type SD28_RS02360 IPR019972 Ribosomal protein L14P, conserved site SD28_RS02360 IPR036853 Ribosomal protein L14 superfamily SD28_RS02360 IPR000218 Ribosomal protein L14P SD28_RS02365 IPR008991 Translation protein SH3-like domain superfamily SD28_RS02365 IPR005825 Ribosomal protein L24/L26, conserved site SD28_RS02365 IPR041988 Ribosomal Protein L26/L24, KOW domain SD28_RS02365 IPR003256 Ribosomal protein L24 SD28_RS02365 IPR014722 Ribosomal protein L2, domain 2 SD28_RS02370 IPR020930 Ribosomal protein L5, bacterial-type SD28_RS02370 IPR002132 Ribosomal protein L5 SD28_RS02370 IPR031310 Ribosomal protein L5, N-terminal SD28_RS02370 IPR020929 Ribosomal protein L5, conserved site SD28_RS02370 IPR022803 Ribosomal protein L5 domain superfamily SD28_RS02370 IPR031309 Ribosomal protein L5, C-terminal SD28_RS02375 IPR023036 Ribosomal protein S14, bacterial/plastid SD28_RS02375 IPR001209 Ribosomal protein S14 SD28_RS02375 IPR018271 Ribosomal protein S14, conserved site SD28_RS02380 IPR035987 Ribosomal protein S8 superfamily SD28_RS02380 IPR000630 Ribosomal protein S8 SD28_RS02385 IPR020040 Ribosomal protein L6, alpha-beta domain SD28_RS02385 IPR000702 Ribosomal protein L6 SD28_RS02385 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily SD28_RS02385 IPR019906 Ribosomal protein L6, bacterial-type SD28_RS02385 IPR002358 Ribosomal protein L6, conserved site SD28_RS02390 IPR004389 Ribosomal protein L18, bacterial-type SD28_RS02390 IPR005484 Ribosomal protein L18 SD28_RS02395 IPR005324 Ribosomal protein S5, C-terminal SD28_RS02395 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SD28_RS02395 IPR013810 Ribosomal protein S5, N-terminal SD28_RS02395 IPR018192 Ribosomal protein S5, N-terminal, conserved site SD28_RS02395 IPR005712 Ribosomal protein S5, bacterial-type SD28_RS02395 IPR020568 Ribosomal protein S5 domain 2-type fold SD28_RS02395 IPR000851 Ribosomal protein S5 SD28_RS02400 IPR005996 Ribosomal protein L30, bacterial-type SD28_RS02400 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily SD28_RS02400 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain SD28_RS02405 IPR036227 Ribosomal L18e/L15P superfamily SD28_RS02405 IPR005749 Ribosomal protein L15, bacterial-type SD28_RS02405 IPR001196 Ribosomal protein L15, conserved site SD28_RS02405 IPR021131 Ribosomal protein L18e/L15P SD28_RS02405 IPR030878 Ribosomal protein L15 SD28_RS02410 IPR002208 SecY/SEC61-alpha family SD28_RS02410 IPR030659 SecY conserved site SD28_RS02410 IPR023201 SecY domain superfamily SD28_RS02410 IPR026593 Protein translocase subunit SecY SD28_RS02415 IPR035977 Ribosomal protein L36 superfamily SD28_RS02415 IPR000473 Ribosomal protein L36 SD28_RS02420 IPR019980 Ribosomal protein S13, bacterial-type SD28_RS02420 IPR018269 Ribosomal protein S13, conserved site SD28_RS02420 IPR001892 Ribosomal protein S13 SD28_RS02420 IPR027437 30s ribosomal protein S13, C-terminal SD28_RS02420 IPR010979 Ribosomal protein S13-like, H2TH SD28_RS02425 IPR036967 Ribosomal protein S11 superfamily SD28_RS02425 IPR019981 Ribosomal protein S11, bacterial-type SD28_RS02425 IPR018102 Ribosomal S11, conserved site SD28_RS02425 IPR001971 Ribosomal protein S11 SD28_RS02430 IPR018079 Ribosomal protein S4, conserved site SD28_RS02430 IPR036986 RNA-binding S4 domain superfamily SD28_RS02430 IPR022801 Ribosomal protein S4/S9 SD28_RS02430 IPR001912 Ribosomal protein S4/S9, N-terminal SD28_RS02430 IPR002942 RNA-binding S4 domain SD28_RS02430 IPR005709 Ribosomal protein S4, bacterial-type SD28_RS02435 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type SD28_RS02435 IPR011262 DNA-directed RNA polymerase, insert domain SD28_RS02435 IPR036643 DNA-directed RNA polymerase, insert domain superfamily SD28_RS02435 IPR036603 RNA polymerase, RBP11-like subunit SD28_RS02435 IPR011260 RNA polymerase, alpha subunit, C-terminal SD28_RS02435 IPR011773 DNA-directed RNA polymerase, alpha subunit SD28_RS02440 IPR036373 Ribosomal protein L17 superfamily SD28_RS02440 IPR000456 Ribosomal protein L17 SD28_RS02445 IPR020568 Ribosomal protein S5 domain 2-type fold SD28_RS02445 IPR001404 Heat shock protein Hsp90 family SD28_RS02445 IPR037196 HSP90, C-terminal domain SD28_RS02445 IPR019805 Heat shock protein Hsp90, conserved site SD28_RS02445 IPR003594 Histidine kinase/HSP90-like ATPase SD28_RS02445 IPR020575 Heat shock protein Hsp90, N-terminal SD28_RS02445 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SD28_RS02450 IPR004468 CTP synthase SD28_RS02450 IPR029062 Class I glutamine amidotransferase-like SD28_RS02450 IPR017926 Glutamine amidotransferase SD28_RS02450 IPR017456 CTP synthase, N-terminal SD28_RS02450 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS02450 IPR033828 CTP synthase GATase domain SD28_RS02455 IPR001564 Nucleoside diphosphate kinase SD28_RS02455 IPR036850 Nucleoside diphosphate kinase-like domain superfamily SD28_RS02455 IPR034907 Nucleoside diphosphate kinase-like domain SD28_RS02455 IPR023005 Nucleoside diphosphate kinase, active site SD28_RS02460 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal SD28_RS02460 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit SD28_RS02460 IPR029045 ClpP/crotonase-like domain superfamily SD28_RS02460 IPR041010 Acetyl-coA carboxylase zinc finger domain SD28_RS02460 IPR034733 Acetyl-CoA carboxylase SD28_RS02465 IPR036615 Mur ligase, C-terminal domain superfamily SD28_RS02465 IPR001645 Folylpolyglutamate synthetase SD28_RS02465 IPR018109 Folylpolyglutamate synthetase, conserved site SD28_RS02465 IPR013221 Mur ligase, central SD28_RS02465 IPR036565 Mur-like, catalytic domain superfamily SD28_RS02470 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE SD28_RS02470 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS02480 IPR004268 Peptidoglycan biosynthesis protein MurJ SD28_RS02485 IPR007370 Glutamate--cysteine ligase SD28_RS02485 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain SD28_RS02485 IPR006334 Glutamate--cysteine ligase, monofunctional SD28_RS02490 IPR034704 L28p-like SD28_RS02490 IPR002150 Ribosomal protein L31 SD28_RS02490 IPR042105 Ribosomal protein L31 superfamily SD28_RS02490 IPR027491 Ribosomal protein L31 type A SD28_RS02495 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding SD28_RS02495 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria SD28_RS02495 IPR017927 FAD-binding domain, ferredoxin reductase-type SD28_RS02495 IPR001094 Flavodoxin-like SD28_RS02495 IPR001433 Oxidoreductase FAD/NAD(P)-binding SD28_RS02495 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily SD28_RS02495 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain SD28_RS02495 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain SD28_RS02495 IPR017938 Riboflavin synthase-like beta-barrel SD28_RS02495 IPR029039 Flavoprotein-like superfamily SD28_RS02495 IPR008254 Flavodoxin/nitric oxide synthase SD28_RS02495 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase SD28_RS02505 IPR036013 Band 7/SPFH domain superfamily SD28_RS02505 IPR018080 Band 7/stomatin-like, conserved site SD28_RS02505 IPR001972 Stomatin family SD28_RS02505 IPR001107 Band 7 domain SD28_RS02515 IPR014017 UvrD-like DNA helicase, C-terminal SD28_RS02515 IPR000212 DNA helicase, UvrD/REP type SD28_RS02515 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS02515 IPR013986 DExx box DNA helicase domain superfamily SD28_RS02515 IPR005753 DNA helicase, ATP-dependent, UvrD type SD28_RS02515 IPR014016 UvrD-like helicase, ATP-binding domain SD28_RS02515 IPR034739 UvrD/AddA helicase, N-terminal SD28_RS02525 IPR000577 Carbohydrate kinase, FGGY SD28_RS02525 IPR018483 Carbohydrate kinase, FGGY, conserved site SD28_RS02525 IPR018484 Carbohydrate kinase, FGGY, N-terminal SD28_RS02525 IPR005999 Glycerol kinase SD28_RS02525 IPR018485 Carbohydrate kinase, FGGY, C-terminal SD28_RS02530 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase SD28_RS02530 IPR036188 FAD/NAD(P)-binding domain superfamily SD28_RS02530 IPR006076 FAD dependent oxidoreductase SD28_RS02530 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily SD28_RS02530 IPR031656 Alpha-glycerophosphate oxidase, C-terminal SD28_RS02535 IPR000425 Major intrinsic protein SD28_RS02535 IPR023271 Aquaporin-like SD28_RS02535 IPR022357 Major intrinsic protein, conserved site SD28_RS02565 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain SD28_RS02565 IPR031157 Tr-type G domain, conserved site SD28_RS02565 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS02565 IPR005225 Small GTP-binding protein domain SD28_RS02565 IPR000795 Transcription factor, GTP-binding domain SD28_RS02565 IPR009000 Translation protein, beta-barrel domain superfamily SD28_RS02565 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal SD28_RS02565 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle SD28_RS02565 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal SD28_RS02565 IPR004161 Translation elongation factor EFTu-like, domain 2 SD28_RS02565 IPR033720 Elongation factor Tu, domain 2 SD28_RS02575 IPR005807 SecE subunit of protein translocation complex, bacterial-like SD28_RS02575 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit SD28_RS02575 IPR038379 SecE superfamily SD28_RS02580 IPR008991 Translation protein SH3-like domain superfamily SD28_RS02580 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site SD28_RS02580 IPR001062 Transcription antitermination protein, NusG SD28_RS02580 IPR014722 Ribosomal protein L2, domain 2 SD28_RS02580 IPR036735 NusG, N-terminal domain superfamily SD28_RS02580 IPR006645 NusG, N-terminal SD28_RS02580 IPR005824 KOW SD28_RS02585 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily SD28_RS02585 IPR036769 Ribosomal protein L11, C-terminal domain superfamily SD28_RS02585 IPR020783 Ribosomal protein L11, C-terminal SD28_RS02585 IPR006519 Ribosomal protein L11, bacterial-type SD28_RS02585 IPR000911 Ribosomal protein L11/L12 SD28_RS02585 IPR020784 Ribosomal protein L11, N-terminal SD28_RS02585 IPR020785 Ribosomal protein L11, conserved site SD28_RS02590 IPR005878 Ribosomal protein L1, bacterial-type SD28_RS02590 IPR023673 Ribosomal protein L1, conserved site SD28_RS02590 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich SD28_RS02590 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein SD28_RS02590 IPR023674 Ribosomal protein L1-like SD28_RS02590 IPR002143 Ribosomal protein L1 SD28_RS02595 IPR022973 Ribosomal protein L10 SD28_RS02595 IPR001790 Ribosomal protein L10P SD28_RS02600 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SD28_RS02600 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily SD28_RS02600 IPR008932 Ribosomal protein L7/L12, oligomerisation SD28_RS02600 IPR000206 Ribosomal protein L7/L12 SD28_RS02600 IPR013823 Ribosomal protein L7/L12, C-terminal SD28_RS02605 IPR042107 DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily SD28_RS02605 IPR037034 RNA polymerase Rpb2, domain 2 superfamily SD28_RS02605 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain SD28_RS02605 IPR015712 DNA-directed RNA polymerase, subunit 2 SD28_RS02605 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain SD28_RS02605 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily SD28_RS02605 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type SD28_RS02605 IPR014724 RNA polymerase Rpb2, OB-fold SD28_RS02605 IPR007641 RNA polymerase Rpb2, domain 7 SD28_RS02605 IPR007645 RNA polymerase Rpb2, domain 3 SD28_RS02605 IPR007121 RNA polymerase, beta subunit, conserved site SD28_RS02605 IPR007642 RNA polymerase Rpb2, domain 2 SD28_RS02605 IPR007644 RNA polymerase, beta subunit, protrusion SD28_RS02610 IPR007081 RNA polymerase Rpb1, domain 5 SD28_RS02610 IPR012754 DNA-directed RNA polymerase, subunit beta-prime SD28_RS02610 IPR000722 RNA polymerase, alpha subunit SD28_RS02610 IPR006592 RNA polymerase, N-terminal SD28_RS02610 IPR007080 RNA polymerase Rpb1, domain 1 SD28_RS02610 IPR042102 RNA polymerase Rpb1, domain 3 superfamily SD28_RS02610 IPR038120 RNA polymerase Rpb1, funnel domain superfamily SD28_RS02610 IPR007066 RNA polymerase Rpb1, domain 3 SD28_RS02610 IPR007083 RNA polymerase Rpb1, domain 4 SD28_RS02620 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD SD28_RS02620 IPR000905 Gcp-like domain SD28_RS02620 IPR017861 Kae1/TsaD family SD28_RS02630 IPR002133 S-adenosylmethionine synthetase SD28_RS02630 IPR022628 S-adenosylmethionine synthetase, N-terminal SD28_RS02630 IPR022629 S-adenosylmethionine synthetase, central domain SD28_RS02630 IPR022630 S-adenosylmethionine synthetase, C-terminal SD28_RS02630 IPR022631 S-adenosylmethionine synthetase, conserved site SD28_RS02630 IPR022636 S-adenosylmethionine synthetase superfamily SD28_RS02635 IPR000307 Ribosomal protein S16 SD28_RS02635 IPR023803 Ribosomal protein S16 domain superfamily SD28_RS02640 IPR011961 16S rRNA processing protein RimM SD28_RS02640 IPR009000 Translation protein, beta-barrel domain superfamily SD28_RS02640 IPR027275 PRC-barrel domain SD28_RS02640 IPR036976 RimM, N-terminal domain superfamily SD28_RS02640 IPR002676 RimM, N-terminal SD28_RS02640 IPR011033 PRC-barrel-like superfamily SD28_RS02650 IPR038657 Ribosomal protein L19 superfamily SD28_RS02650 IPR008991 Translation protein SH3-like domain superfamily SD28_RS02650 IPR001857 Ribosomal protein L19 SD28_RS02650 IPR018257 Ribosomal protein L19, conserved site SD28_RS02655 IPR013762 Integrase-like, catalytic domain superfamily SD28_RS02655 IPR002104 Integrase, catalytic domain SD28_RS02655 IPR010998 Integrase/recombinase, N-terminal SD28_RS02655 IPR004107 Integrase, SAM-like, N-terminal SD28_RS02655 IPR011932 Tyrosine recombinase XerD SD28_RS02655 IPR011010 DNA breaking-rejoining enzyme, catalytic core SD28_RS02655 IPR023009 Tyrosine recombinase XerC/XerD SD28_RS02660 IPR027443 Isopenicillin N synthase-like SD28_RS02660 IPR026992 Non-haem dioxygenase N-terminal domain SD28_RS02660 IPR005123 Oxoglutarate/iron-dependent dioxygenase SD28_RS02665 IPR000086 NUDIX hydrolase domain SD28_RS02665 IPR022927 RNA pyrophosphohydrolase RppH SD28_RS02665 IPR015797 NUDIX hydrolase-like domain superfamily SD28_RS02665 IPR020084 NUDIX hydrolase, conserved site SD28_RS02665 IPR020476 NUDIX hydrolase SD28_RS02690 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I SD28_RS02690 IPR006258 Dihydrolipoamide dehydrogenase SD28_RS02690 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily SD28_RS02690 IPR023753 FAD/NAD(P)-binding domain SD28_RS02690 IPR036188 FAD/NAD(P)-binding domain superfamily SD28_RS02690 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site SD28_RS02690 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SD28_RS02695 IPR032816 SNARE associated Golgi protein SD28_RS02695 IPR015414 Transmembrane protein TMEM64 SD28_RS02700 IPR011583 Chitinase II SD28_RS02700 IPR003961 Fibronectin type III SD28_RS02700 IPR036116 Fibronectin type III superfamily SD28_RS02700 IPR008979 Galactose-binding-like domain superfamily SD28_RS02700 IPR003305 Carbohydrate-binding, CenC-like SD28_RS02700 IPR017853 Glycoside hydrolase superfamily SD28_RS02700 IPR001579 Glycoside hydrolase, chitinase active site SD28_RS02700 IPR001223 Glycoside hydrolase family 18, catalytic domain SD28_RS02700 IPR013783 Immunoglobulin-like fold SD28_RS02720 IPR003445 Cation transporter SD28_RS02720 IPR004772 TrkH potassium transport family SD28_RS02735 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria SD28_RS02735 IPR004564 Outer membrane lipoprotein carrier protein LolA-like SD28_RS02735 IPR029046 Lipoprotein localisation LolA/LolB/LppX SD28_RS02740 IPR018541 FtsK gamma domain SD28_RS02740 IPR036390 Winged helix DNA-binding domain superfamily SD28_RS02740 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS02740 IPR036388 Winged helix-like DNA-binding domain superfamily SD28_RS02740 IPR041027 FtsK alpha domain SD28_RS02740 IPR025199 DNA translocase FtsK, 4TM region SD28_RS02740 IPR002543 FtsK domain SD28_RS02745 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SD28_RS02745 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily SD28_RS02750 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type SD28_RS02750 IPR012080 Aspartate-semialdehyde dehydrogenase SD28_RS02750 IPR036291 NAD(P)-binding domain superfamily SD28_RS02750 IPR000534 Semialdehyde dehydrogenase, NAD-binding SD28_RS02750 IPR012280 Semialdehyde dehydrogenase, dimerisation domain SD28_RS02750 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site SD28_RS02760 IPR004841 Amino acid permease/ SLC12A domain SD28_RS02760 IPR004840 Amino acid permease, conserved site SD28_RS02765 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain SD28_RS02765 IPR029058 Alpha/Beta hydrolase fold SD28_RS02770 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase SD28_RS02775 IPR011851 Sodium/proline symporter SD28_RS02775 IPR001734 Sodium/solute symporter SD28_RS02775 IPR018212 Sodium/solute symporter, conserved site SD28_RS02775 IPR038377 Sodium/glucose symporter superfamily SD28_RS02795 IPR001598 Transposase, IS30, conserved site SD28_RS02795 IPR012337 Ribonuclease H-like superfamily SD28_RS02795 IPR001584 Integrase, catalytic core SD28_RS02795 IPR009057 Homeobox-like domain superfamily SD28_RS02795 IPR036397 Ribonuclease H superfamily SD28_RS02810 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding SD28_RS02810 IPR032678 tRNA synthetases class I, catalytic domain SD28_RS02810 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SD28_RS02810 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase SD28_RS02810 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR SD28_RS02810 IPR015803 Cysteine-tRNA ligase SD28_RS02815 IPR002052 DNA methylase, N-6 adenine-specific, conserved site SD28_RS02815 IPR004556 Methyltransferase HemK-like SD28_RS02815 IPR007848 Methyltransferase small domain SD28_RS02815 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SD28_RS02815 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase SD28_RS02830 IPR029028 Alpha/beta knot methyltransferases SD28_RS02830 IPR003742 RNA methyltransferase RlmH SD28_RS02830 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SD28_RS02835 IPR005583 Peroxide stress protein YaaA SD28_RS02845 IPR001598 Transposase, IS30, conserved site SD28_RS02845 IPR009057 Homeobox-like domain superfamily SD28_RS02845 IPR036397 Ribonuclease H superfamily SD28_RS02845 IPR012337 Ribonuclease H-like superfamily SD28_RS02845 IPR001584 Integrase, catalytic core SD28_RS02860 IPR015991 Uncharacterised hydrolase TatD-type SD28_RS02860 IPR018228 Deoxyribonuclease, TatD-related, conserved site SD28_RS02860 IPR032466 Metal-dependent hydrolase SD28_RS02860 IPR001130 TatD family SD28_RS02880 IPR002781 Transmembrane protein TauE-like SD28_RS02885 IPR017871 ABC transporter, conserved site SD28_RS02885 IPR003439 ABC transporter-like SD28_RS02885 IPR003593 AAA+ ATPase domain SD28_RS02885 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS02890 IPR000412 ABC-2 transporter SD28_RS02890 IPR013525 ABC-2 type transporter SD28_RS02895 IPR001173 Glycosyltransferase 2-like SD28_RS02895 IPR029044 Nucleotide-diphospho-sugar transferases SD28_RS02900 IPR002504 NAD kinase SD28_RS02900 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily SD28_RS02900 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal SD28_RS02900 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal SD28_RS02905 IPR036388 Winged helix-like DNA-binding domain superfamily SD28_RS02905 IPR040764 Conserved virulence factor B-like, winged helix domain SD28_RS02905 IPR039566 Conserved virulence factor B, S1 domain SD28_RS02905 IPR014464 Conserved virulence factor B SD28_RS02910 IPR001123 Amino acid exporter protein, LeuE-type SD28_RS02910 IPR004778 Homoserine/Threonine efflux protein SD28_RS02915 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type SD28_RS02915 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SD28_RS02940 IPR021309 Protein of unknown function DUF2892 SD28_RS02940 IPR001763 Rhodanese-like domain SD28_RS02940 IPR036873 Rhodanese-like domain superfamily SD28_RS02945 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SD28_RS02945 IPR001279 Metallo-beta-lactamase SD28_RS02955 IPR005358 Putative zinc- or iron-chelating domain containing protein SD28_RS02955 IPR008228 Uncharacterised conserved protein UCP006173 SD28_RS02960 IPR035926 NusB-like superfamily SD28_RS02960 IPR011605 NusB antitermination factor SD28_RS02960 IPR006027 NusB/RsmB/TIM44 SD28_RS02965 IPR001110 Uncharacterised protein family UPF0012, conserved site SD28_RS02965 IPR036526 Carbon-nitrogen hydrolase superfamily SD28_RS02965 IPR003010 Carbon-nitrogen hydrolase SD28_RS02970 IPR015424 Pyridoxal phosphate-dependent transferase SD28_RS02970 IPR004839 Aminotransferase, class I/classII SD28_RS02970 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 SD28_RS02970 IPR015421 Pyridoxal phosphate-dependent transferase, major domain SD28_RS02975 IPR002316 Proline-tRNA ligase, class IIa SD28_RS02975 IPR036621 Anticodon-binding domain superfamily SD28_RS02975 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 SD28_RS02975 IPR004154 Anticodon-binding SD28_RS02975 IPR006195 Aminoacyl-tRNA synthetase, class II SD28_RS02975 IPR033730 Prokaryote proline-tRNA ligase core domain SD28_RS02975 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily SD28_RS02975 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain SD28_RS02975 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) SD28_RS02975 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type SD28_RS02985 IPR009057 Homeobox-like domain superfamily SD28_RS02985 IPR001584 Integrase, catalytic core SD28_RS02985 IPR036397 Ribonuclease H superfamily SD28_RS02985 IPR012337 Ribonuclease H-like superfamily SD28_RS02985 IPR001598 Transposase, IS30, conserved site SD28_RS03005 IPR003808 Fe-S metabolism associated domain, SufE-like SD28_RS03025 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain SD28_RS03025 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain SD28_RS03025 IPR017782 Hydroxyacylglutathione hydrolase SD28_RS03025 IPR001279 Metallo-beta-lactamase SD28_RS03025 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SD28_RS03070 IPR016368 Virulence-associated protein D SD28_RS03105 IPR013840 NAD-dependent DNA ligase, N-terminal SD28_RS03105 IPR033136 NAD-dependent DNA ligase, conserved site SD28_RS03105 IPR001679 NAD-dependent DNA ligase SD28_RS03105 IPR041663 DisA/LigA, helix-hairpin-helix motif SD28_RS03105 IPR036420 BRCT domain superfamily SD28_RS03105 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 SD28_RS03105 IPR012340 Nucleic acid-binding, OB-fold SD28_RS03105 IPR004150 NAD-dependent DNA ligase, OB-fold SD28_RS03105 IPR010994 RuvA domain 2-like SD28_RS03105 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type SD28_RS03105 IPR001357 BRCT domain SD28_RS03105 IPR013839 NAD-dependent DNA ligase, adenylation SD28_RS03115 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS03115 IPR011335 Restriction endonuclease type II-like SD28_RS03115 IPR006697 RecBCD enzyme subunit RecC SD28_RS03115 IPR013986 DExx box DNA helicase domain superfamily SD28_RS03115 IPR041500 RecC, C-terminal SD28_RS03130 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SD28_RS03130 IPR007536 Ribosomal RNA small subunit methyltransferase J SD28_RS03135 IPR013762 Integrase-like, catalytic domain superfamily SD28_RS03135 IPR023009 Tyrosine recombinase XerC/XerD SD28_RS03135 IPR011931 Tyrosine recombinase XerC SD28_RS03135 IPR004107 Integrase, SAM-like, N-terminal SD28_RS03135 IPR010998 Integrase/recombinase, N-terminal SD28_RS03135 IPR002104 Integrase, catalytic domain SD28_RS03135 IPR011010 DNA breaking-rejoining enzyme, catalytic core SD28_RS03140 IPR013061 Tryptophan/tryrosine permease, conserved site SD28_RS03140 IPR013059 Tryptophan/tyrosine transporter SD28_RS03140 IPR018227 Amino acid/polyamine transporter 2 SD28_RS03145 IPR003708 Bacterial protein export chaperone SecB SD28_RS03145 IPR035958 SecB-like superfamily SD28_RS03150 IPR036678 MutS, connector domain superfamily SD28_RS03150 IPR007860 DNA mismatch repair protein MutS, connector domain SD28_RS03150 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS03150 IPR036187 DNA mismatch repair protein MutS, core domain superfamily SD28_RS03150 IPR017261 DNA mismatch repair protein MutS/MSH SD28_RS03150 IPR000432 DNA mismatch repair protein MutS, C-terminal SD28_RS03150 IPR005748 DNA mismatch repair protein MutS SD28_RS03150 IPR007695 DNA mismatch repair protein MutS-like, N-terminal SD28_RS03150 IPR007861 DNA mismatch repair protein MutS, clamp SD28_RS03150 IPR007696 DNA mismatch repair protein MutS, core SD28_RS03150 IPR016151 DNA mismatch repair protein MutS, N-terminal SD28_RS03155 IPR001095 Acetyl-CoA carboxylase, alpha subunit SD28_RS03155 IPR029045 ClpP/crotonase-like domain superfamily SD28_RS03155 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal SD28_RS03175 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ SD28_RS03175 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein SD28_RS03175 IPR001347 Sugar isomerase (SIS) SD28_RS03175 IPR005486 Glucokinase regulatory protein, conserved site SD28_RS03185 IPR006153 Cation/H+ exchanger SD28_RS03185 IPR038770 Sodium/solute symporter superfamily SD28_RS03185 IPR018422 Cation/H+ exchanger, CPA1 family SD28_RS03195 IPR024109 Tryptophan-tRNA ligase, bacterial-type SD28_RS03195 IPR002306 Tryptophan-tRNA ligase SD28_RS03195 IPR036913 YegP-like superfamily SD28_RS03195 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SD28_RS03195 IPR002305 Aminoacyl-tRNA synthetase, class Ic SD28_RS03195 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site SD28_RS03210 IPR001977 Dephospho-CoA kinase SD28_RS03210 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS03220 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III SD28_RS03220 IPR005843 Alpha-D-phosphohexomutase, C-terminal SD28_RS03220 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily SD28_RS03220 IPR016066 Alpha-D-phosphohexomutase, conserved site SD28_RS03220 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II SD28_RS03220 IPR005841 Alpha-D-phosphohexomutase superfamily SD28_RS03220 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III SD28_RS03220 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I SD28_RS03225 IPR005474 Transketolase, N-terminal SD28_RS03225 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II SD28_RS03225 IPR029061 Thiamin diphosphate-binding fold SD28_RS03225 IPR041621 Pyruvate dehydrogenase E1 component, middle domain SD28_RS03225 IPR004660 Pyruvate dehydrogenase E1 component SD28_RS03225 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal SD28_RS03230 IPR036625 E3-binding domain superfamily SD28_RS03230 IPR000089 Biotin/lipoyl attachment SD28_RS03230 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site SD28_RS03230 IPR004167 Peripheral subunit-binding domain SD28_RS03230 IPR011053 Single hybrid motif SD28_RS03230 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex SD28_RS03230 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain SD28_RS03230 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily SD28_RS03235 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site SD28_RS03235 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SD28_RS03235 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I SD28_RS03235 IPR006258 Dihydrolipoamide dehydrogenase SD28_RS03235 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily SD28_RS03235 IPR023753 FAD/NAD(P)-binding domain SD28_RS03235 IPR036188 FAD/NAD(P)-binding domain superfamily SD28_RS03255 IPR002347 Short-chain dehydrogenase/reductase SDR SD28_RS03255 IPR020904 Short-chain dehydrogenase/reductase, conserved site SD28_RS03255 IPR036291 NAD(P)-binding domain superfamily SD28_RS03255 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase SD28_RS03265 IPR020602 GTP cyclohydrolase I domain SD28_RS03265 IPR018234 GTP cyclohydrolase I, conserved site SD28_RS03265 IPR001474 GTP cyclohydrolase I SD28_RS03270 IPR011761 ATP-grasp fold SD28_RS03285 IPR036259 MFS transporter superfamily SD28_RS03285 IPR011701 Major facilitator superfamily SD28_RS03285 IPR004812 Drug resistance transporter Bcr/CmlA subfamily SD28_RS03285 IPR020846 Major facilitator superfamily domain SD28_RS03290 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site SD28_RS03290 IPR004839 Aminotransferase, class I/classII SD28_RS03290 IPR015424 Pyridoxal phosphate-dependent transferase SD28_RS03290 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 SD28_RS03290 IPR015421 Pyridoxal phosphate-dependent transferase, major domain SD28_RS03290 IPR005861 Histidinol-phosphate aminotransferase family SD28_RS03295 IPR000891 Pyruvate carboxyltransferase SD28_RS03295 IPR035685 4-hydroxy-2-oxovalerate aldolase, N-terminal catalytic TIM barrel domain SD28_RS03295 IPR012425 DmpG-like communication SD28_RS03295 IPR013785 Aldolase-type TIM barrel SD28_RS03295 IPR017629 4-hydroxy-2-oxovalerate aldolase SD28_RS03305 IPR024084 Isopropylmalate dehydrogenase-like domain SD28_RS03305 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site SD28_RS03305 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein SD28_RS03305 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily SD28_RS03320 IPR004812 Drug resistance transporter Bcr/CmlA subfamily SD28_RS03320 IPR011701 Major facilitator superfamily SD28_RS03320 IPR020846 Major facilitator superfamily domain SD28_RS03320 IPR036259 MFS transporter superfamily SD28_RS03345 IPR002043 Uracil-DNA glycosylase family 1 SD28_RS03345 IPR036895 Uracil-DNA glycosylase-like domain superfamily SD28_RS03345 IPR018085 Uracil-DNA glycosylase, active site SD28_RS03345 IPR005122 Uracil-DNA glycosylase-like SD28_RS03350 IPR005743 DNA gyrase, subunit A SD28_RS03350 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat SD28_RS03350 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal SD28_RS03350 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily SD28_RS03350 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta SD28_RS03350 IPR013760 DNA topoisomerase, type IIA-like domain superfamily SD28_RS03350 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal SD28_RS03355 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal SD28_RS03355 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase SD28_RS03355 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal SD28_RS03355 IPR026877 DXP reductoisomerase C-terminal domain SD28_RS03355 IPR036169 DXP reductoisomerase, C-terminal domain superfamily SD28_RS03355 IPR036291 NAD(P)-binding domain superfamily SD28_RS03360 IPR034746 POTRA domain SD28_RS03360 IPR023707 Outer membrane protein assembly factor BamA SD28_RS03360 IPR039910 Surface antigen D15-like SD28_RS03360 IPR010827 POTRA domain, BamA/TamA-like SD28_RS03360 IPR000184 Bacterial surface antigen (D15) SD28_RS03370 IPR011004 Trimeric LpxA-like superfamily SD28_RS03370 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region SD28_RS03370 IPR018357 Hexapeptide transferase, conserved site SD28_RS03370 IPR001451 Hexapeptide repeat SD28_RS03370 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD SD28_RS03375 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ SD28_RS03375 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ SD28_RS03375 IPR029069 HotDog domain superfamily SD28_RS03380 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase SD28_RS03380 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily SD28_RS03380 IPR011004 Trimeric LpxA-like superfamily SD28_RS03380 IPR001451 Hexapeptide repeat SD28_RS03380 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal SD28_RS03385 IPR003835 Glycosyl transferase, family 19 SD28_RS03395 IPR036822 Copper homeostasis (CutC) domain superfamily SD28_RS03395 IPR023648 Copper homeostasis CutC domain SD28_RS03395 IPR005627 Copper homeostasis protein CutC SD28_RS03400 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site SD28_RS03400 IPR016102 Succinyl-CoA synthetase-like SD28_RS03400 IPR036291 NAD(P)-binding domain superfamily SD28_RS03400 IPR005811 ATP-citrate lyase/succinyl-CoA ligase SD28_RS03400 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site SD28_RS03400 IPR003781 CoA-binding SD28_RS03400 IPR005810 Succinyl-CoA ligase, alpha subunit SD28_RS03405 IPR011761 ATP-grasp fold SD28_RS03405 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type SD28_RS03405 IPR013815 ATP-grasp fold, subdomain 1 SD28_RS03405 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site SD28_RS03405 IPR005811 ATP-citrate lyase/succinyl-CoA ligase SD28_RS03405 IPR005809 Succinate--CoA synthetase, beta subunit SD28_RS03405 IPR016102 Succinyl-CoA synthetase-like SD28_RS03415 IPR035587 DUS-like, FMN-binding domain SD28_RS03415 IPR004653 tRNA-dihydrouridine(20/20a) synthase SD28_RS03415 IPR001269 tRNA-dihydrouridine synthase SD28_RS03415 IPR018517 tRNA-dihydrouridine synthase, conserved site SD28_RS03415 IPR013785 Aldolase-type TIM barrel SD28_RS03425 IPR003594 Histidine kinase/HSP90-like ATPase SD28_RS03425 IPR034160 DNA gyrase subunit B, TOPRIM domain SD28_RS03425 IPR041423 DNA gyrase subunit B insert domain SD28_RS03425 IPR011557 DNA gyrase, subunit B SD28_RS03425 IPR002288 DNA gyrase B subunit, C-terminal SD28_RS03425 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SD28_RS03425 IPR020568 Ribosomal protein S5 domain 2-type fold SD28_RS03425 IPR018522 DNA topoisomerase, type IIA, conserved site SD28_RS03425 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 SD28_RS03425 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal SD28_RS03425 IPR013760 DNA topoisomerase, type IIA-like domain superfamily SD28_RS03425 IPR001241 DNA topoisomerase, type IIA SD28_RS03425 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SD28_RS03425 IPR006171 TOPRIM domain SD28_RS03430 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding SD28_RS03430 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site SD28_RS03430 IPR020629 Formamidopyrimidine-DNA glycosylase SD28_RS03430 IPR010979 Ribosomal protein S13-like, H2TH SD28_RS03430 IPR035937 MutM-like, N-terminal SD28_RS03430 IPR010663 Zinc finger, FPG/IleRS-type SD28_RS03430 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type SD28_RS03430 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain SD28_RS03435 IPR002123 Phospholipid/glycerol acyltransferase SD28_RS03435 IPR042099 AMP-dependent synthetase-like superfamily SD28_RS03435 IPR000873 AMP-dependent synthetase/ligase SD28_RS03435 IPR020845 AMP-binding, conserved site SD28_RS03435 IPR025110 AMP-binding enzyme, C-terminal domain SD28_RS03435 IPR023775 Bifunctional protein Aas SD28_RS03440 IPR002903 Ribosomal RNA small subunit methyltransferase H SD28_RS03440 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily SD28_RS03440 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SD28_RS03445 IPR011922 Cell division protein FtsL SD28_RS03450 IPR036138 Penicillin-binding protein, dimerisation domain superfamily SD28_RS03450 IPR001460 Penicillin-binding protein, transpeptidase SD28_RS03450 IPR037532 Peptidoglycan D,D-transpeptidase FtsI SD28_RS03450 IPR012338 Beta-lactamase/transpeptidase-like SD28_RS03450 IPR005311 Penicillin-binding protein, dimerisation domain SD28_RS03455 IPR009068 S15/NS1, RNA-binding SD28_RS03455 IPR005290 Ribosomal protein S15, bacterial-type SD28_RS03455 IPR000589 Ribosomal protein S15 SD28_RS03460 IPR012162 Polyribonucleotide nucleotidyltransferase SD28_RS03460 IPR022967 RNA-binding domain, S1 SD28_RS03460 IPR003029 S1 domain SD28_RS03460 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain SD28_RS03460 IPR027408 PNPase/RNase PH domain superfamily SD28_RS03460 IPR012340 Nucleic acid-binding, OB-fold SD28_RS03460 IPR036612 K Homology domain, type 1 superfamily SD28_RS03460 IPR020568 Ribosomal protein S5 domain 2-type fold SD28_RS03460 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily SD28_RS03460 IPR004088 K Homology domain, type 1 SD28_RS03460 IPR004087 K Homology domain SD28_RS03460 IPR036345 Exoribonuclease, PH domain 2 superfamily SD28_RS03460 IPR015847 Exoribonuclease, phosphorolytic domain 2 SD28_RS03460 IPR001247 Exoribonuclease, phosphorolytic domain 1 SD28_RS03465 IPR035903 HesB-like domain superfamily SD28_RS03465 IPR023063 FeS cluster insertion protein ErpA SD28_RS03465 IPR017870 FeS cluster insertion, C-terminal, conserved site SD28_RS03465 IPR016092 FeS cluster insertion protein SD28_RS03465 IPR000361 FeS cluster biogenesis SD28_RS03470 IPR006218 DAHP synthetase I/KDSA SD28_RS03470 IPR006269 3-deoxy-8-phosphooctulonate synthase SD28_RS03470 IPR013785 Aldolase-type TIM barrel SD28_RS03475 IPR000764 Uridine kinase-like SD28_RS03475 IPR026008 Uridine kinase SD28_RS03475 IPR006083 Phosphoribulokinase/uridine kinase SD28_RS03475 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS03480 IPR012293 RNA polymerase subunit, RPB6/omega SD28_RS03480 IPR036161 RPB6/omega subunit-like superfamily SD28_RS03480 IPR006110 RNA polymerase, subunit omega/K/RPB6 SD28_RS03480 IPR003716 DNA-directed RNA polymerase, omega subunit SD28_RS03490 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD SD28_RS03490 IPR002792 TRAM domain SD28_RS03490 IPR030390 RNA methyltransferase TrmA, active site SD28_RS03490 IPR030391 RNA methyltransferase TrmA, conserved site SD28_RS03490 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SD28_RS03490 IPR012340 Nucleic acid-binding, OB-fold SD28_RS03490 IPR010280 (Uracil-5)-methyltransferase family SD28_RS03495 IPR006419 Nicotinamide mononucleotide transporter PnuC SD28_RS03500 IPR006419 Nicotinamide mononucleotide transporter PnuC SD28_RS03510 IPR036849 Enolase-like, C-terminal domain superfamily SD28_RS03510 IPR029017 Enolase-like, N-terminal SD28_RS03510 IPR020811 Enolase, N-terminal SD28_RS03510 IPR000941 Enolase SD28_RS03510 IPR020809 Enolase, conserved site SD28_RS03510 IPR020810 Enolase, C-terminal TIM barrel domain SD28_RS03515 IPR007060 Septum formation initiator FtsL/DivIC SD28_RS03515 IPR023081 Cell division protein FtsB SD28_RS03520 IPR029044 Nucleotide-diphospho-sugar transferases SD28_RS03520 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site SD28_RS03520 IPR034683 Cytidylyltransferase IspD/TarI SD28_RS03520 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SD28_RS03525 IPR018227 Amino acid/polyamine transporter 2 SD28_RS03525 IPR004694 Hydroxy amino acid transporter SD28_RS03530 IPR036291 NAD(P)-binding domain superfamily SD28_RS03530 IPR004627 L-threonine 3-dehydrogenase SD28_RS03530 IPR011032 GroES-like superfamily SD28_RS03530 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site SD28_RS03530 IPR013154 Alcohol dehydrogenase, N-terminal SD28_RS03530 IPR013149 Alcohol dehydrogenase, C-terminal SD28_RS03535 IPR015424 Pyridoxal phosphate-dependent transferase SD28_RS03535 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 SD28_RS03535 IPR015421 Pyridoxal phosphate-dependent transferase, major domain SD28_RS03535 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site SD28_RS03535 IPR004839 Aminotransferase, class I/classII SD28_RS03535 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase SD28_RS03540 IPR036573 Carbohydrate-binding module superfamily 5/12 SD28_RS03540 IPR003610 Carbohydrate-binding module family 5/12 SD28_RS03540 IPR009470 Chitinase, C-terminal SD28_RS03540 IPR011583 Chitinase II SD28_RS03540 IPR029070 Chitinase insertion domain superfamily SD28_RS03540 IPR001223 Glycoside hydrolase family 18, catalytic domain SD28_RS03540 IPR017853 Glycoside hydrolase superfamily SD28_RS03540 IPR013783 Immunoglobulin-like fold SD28_RS03580 IPR006027 NusB/RsmB/TIM44 SD28_RS03580 IPR035926 NusB-like superfamily SD28_RS03580 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type SD28_RS03580 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site SD28_RS03580 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SD28_RS03580 IPR004573 rRNA small subunit methyltransferase B SD28_RS03580 IPR023267 RNA (C5-cytosine) methyltransferase SD28_RS03585 IPR000760 Inositol monophosphatase-like SD28_RS03585 IPR022337 Inositol monophosphatase, SuhB SD28_RS03585 IPR020550 Inositol monophosphatase, conserved site SD28_RS03585 IPR020583 Inositol monophosphatase, metal-binding site SD28_RS03585 IPR033942 Inositol monophosphatase SD28_RS03590 IPR018383 Uncharacterised protein family UPF0324, prokaryote SD28_RS03590 IPR004630 Uncharacterised protein family UPF0324, bacteria SD28_RS03610 IPR042094 Type II secretion system F domain superfamily SD28_RS03610 IPR003004 GspF/PilC family SD28_RS03610 IPR018076 Type II secretion system F domain SD28_RS03610 IPR001992 Type II secretion system conserved site SD28_RS03615 IPR042181 Type II secretion system, protein E, N-terminal SD28_RS03615 IPR007831 General secretory system II, protein E, N-terminal SD28_RS03615 IPR037257 General secretory system II, protein E, N-terminal superfamily SD28_RS03615 IPR001482 Type II/IV secretion system protein SD28_RS03615 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS03615 IPR013374 ATPase, type IV, pilus assembly, PilB SD28_RS03620 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily SD28_RS03620 IPR030395 Glycerophosphodiester phosphodiesterase domain SD28_RS03625 IPR041424 CinA, KH domain SD28_RS03625 IPR008135 Competence-induced protein CinA SD28_RS03625 IPR008136 CinA, C-terminal SD28_RS03625 IPR001453 MoaB/Mog domain SD28_RS03625 IPR036425 MoaB/Mog-like domain superfamily SD28_RS03625 IPR036653 CinA-like, C-terminal SD28_RS03630 IPR011810 Cyanophycin synthetase SD28_RS03630 IPR013221 Mur ligase, central SD28_RS03630 IPR036615 Mur ligase, C-terminal domain superfamily SD28_RS03630 IPR004101 Mur ligase, C-terminal SD28_RS03630 IPR036565 Mur-like, catalytic domain superfamily SD28_RS03630 IPR013651 ATP-grasp fold, RimK-type SD28_RS03630 IPR011761 ATP-grasp fold SD28_RS03635 IPR004101 Mur ligase, C-terminal SD28_RS03635 IPR013221 Mur ligase, central SD28_RS03635 IPR036615 Mur ligase, C-terminal domain superfamily SD28_RS03635 IPR036565 Mur-like, catalytic domain superfamily SD28_RS03635 IPR011810 Cyanophycin synthetase SD28_RS03635 IPR011761 ATP-grasp fold SD28_RS03635 IPR013815 ATP-grasp fold, subdomain 1 SD28_RS03635 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain SD28_RS03645 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site SD28_RS03645 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase SD28_RS03645 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily SD28_RS03655 IPR004872 Lipoprotein NlpA family SD28_RS03660 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS03660 IPR018449 NIL domain SD28_RS03660 IPR003593 AAA+ ATPase domain SD28_RS03660 IPR017871 ABC transporter, conserved site SD28_RS03660 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain SD28_RS03660 IPR003439 ABC transporter-like SD28_RS03660 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal SD28_RS03660 IPR026253 Methionine import ATP-binding protein MetN SD28_RS03665 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY SD28_RS03670 IPR023827 Peptidase S8, subtilisin, Asp-active site SD28_RS03670 IPR000209 Peptidase S8/S53 domain SD28_RS03670 IPR002884 P domain SD28_RS03670 IPR036852 Peptidase S8/S53 domain superfamily SD28_RS03670 IPR015500 Peptidase S8, subtilisin-related SD28_RS03670 IPR022398 Peptidase S8, subtilisin, His-active site SD28_RS03670 IPR023828 Peptidase S8, subtilisin, Ser-active site SD28_RS03670 IPR034176 Peptidase MprA-like catalytic domain SD28_RS03680 IPR004803 tRNA-guanine transglycosylase SD28_RS03680 IPR002616 tRNA-guanine(15) transglycosylase-like SD28_RS03680 IPR036511 Queuine tRNA-ribosyltransferase-like SD28_RS03690 IPR001598 Transposase, IS30, conserved site SD28_RS03690 IPR001584 Integrase, catalytic core SD28_RS03690 IPR012337 Ribonuclease H-like superfamily SD28_RS03690 IPR009057 Homeobox-like domain superfamily SD28_RS03690 IPR036397 Ribonuclease H superfamily SD28_RS03705 IPR003849 Preprotein translocase YajC SD28_RS03710 IPR027398 SecD export protein N-terminal TM domain SD28_RS03710 IPR005791 Protein translocase subunit SecD SD28_RS03710 IPR001036 Acriflavin resistance protein SD28_RS03710 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site SD28_RS03710 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial SD28_RS03710 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SD28_RS03715 IPR005665 Protein-export membrane protein SecF, bacterial SD28_RS03715 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial SD28_RS03715 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SD28_RS03715 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site SD28_RS03725 IPR007627 RNA polymerase sigma-70 region 2 SD28_RS03725 IPR009042 RNA polymerase sigma-70 region 1.2 SD28_RS03725 IPR000943 RNA polymerase sigma-70 SD28_RS03725 IPR014284 RNA polymerase sigma-70 like domain SD28_RS03725 IPR007630 RNA polymerase sigma-70 region 4 SD28_RS03725 IPR013325 RNA polymerase sigma factor, region 2 SD28_RS03725 IPR013324 RNA polymerase sigma factor, region 3/4-like SD28_RS03725 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria SD28_RS03730 IPR001986 Enolpyruvate transferase domain SD28_RS03730 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta SD28_RS03730 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site SD28_RS03730 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase SD28_RS03730 IPR036968 Enolpyruvate transferase domain superfamily SD28_RS03740 IPR036397 Ribonuclease H superfamily SD28_RS03740 IPR022892 Ribonuclease HI SD28_RS03740 IPR012337 Ribonuclease H-like superfamily SD28_RS03740 IPR002156 Ribonuclease H domain SD28_RS03745 IPR036152 Asparaginase/glutaminase-like superfamily SD28_RS03745 IPR020827 Asparaginase/glutaminase, active site 1 SD28_RS03745 IPR027475 Asparaginase/glutaminase, active site 2 SD28_RS03745 IPR006034 Asparaginase/glutaminase-like SD28_RS03745 IPR006033 Type I L-asparaginase family SD28_RS03745 IPR037152 L-asparaginase, N-terminal domain superfamily SD28_RS03745 IPR027473 L-asparaginase, C-terminal SD28_RS03745 IPR027474 L-asparaginase, N-terminal SD28_RS03745 IPR041725 Type I (cytosolic) L-asparaginase SD28_RS03745 IPR040919 Asparaginase/glutaminase, C-terminal SD28_RS03750 IPR001765 Carbonic anhydrase SD28_RS03750 IPR036874 Carbonic anhydrase superfamily SD28_RS03750 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site SD28_RS03760 IPR008881 Trigger factor, ribosome-binding, bacterial SD28_RS03760 IPR036611 Trigger factor ribosome-binding domain superfamily SD28_RS03760 IPR027304 Trigger factor/SurA domain superfamily SD28_RS03760 IPR037041 Trigger factor, C-terminal domain superfamily SD28_RS03760 IPR008880 Trigger factor, C-terminal SD28_RS03760 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain SD28_RS03760 IPR005215 Trigger factor SD28_RS03765 IPR001907 ATP-dependent Clp protease proteolytic subunit SD28_RS03765 IPR018215 ClpP, Ser active site SD28_RS03765 IPR029045 ClpP/crotonase-like domain superfamily SD28_RS03765 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA SD28_RS03765 IPR033135 ClpP, histidine active site SD28_RS03770 IPR003593 AAA+ ATPase domain SD28_RS03770 IPR019489 Clp ATPase, C-terminal SD28_RS03770 IPR004487 Clp protease, ATP-binding subunit ClpX SD28_RS03770 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS03770 IPR010603 Zinc finger, ClpX C4-type SD28_RS03770 IPR003959 ATPase, AAA-type, core SD28_RS03770 IPR038366 Zinc finger, ClpX C4-type superfamily SD28_RS03775 IPR015947 PUA-like superfamily SD28_RS03775 IPR008268 Peptidase S16, active site SD28_RS03775 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS03775 IPR003111 Lon, substrate-binding domain SD28_RS03775 IPR027065 Lon protease SD28_RS03775 IPR027543 Lon protease, bacterial SD28_RS03775 IPR004815 Lon protease, bacterial/eukaryotic-type SD28_RS03775 IPR020568 Ribosomal protein S5 domain 2-type fold SD28_RS03775 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SD28_RS03775 IPR008269 Peptidase S16, Lon proteolytic domain SD28_RS03775 IPR003593 AAA+ ATPase domain SD28_RS03775 IPR003959 ATPase, AAA-type, core SD28_RS03780 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily SD28_RS03780 IPR020816 Histone-like DNA-binding protein, conserved site SD28_RS03780 IPR000119 Histone-like DNA-binding protein SD28_RS03790 IPR039657 Dimethylallyltransferase SD28_RS03790 IPR018022 IPP transferase SD28_RS03790 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS03810 IPR010920 LSM domain superfamily SD28_RS03810 IPR005001 RNA-binding protein Hfq SD28_RS03815 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS03815 IPR025121 GTPase HflX, N-terminal SD28_RS03815 IPR035647 EF-G domain III/V-like SD28_RS03815 IPR030394 HflX-type guanine nucleotide-binding (G) domain SD28_RS03815 IPR032305 GTP-binding protein, middle domain SD28_RS03815 IPR006073 GTP binding domain SD28_RS03815 IPR016496 GTPase HflX SD28_RS03815 IPR042108 GTPase HflX, N-terminal domain superfamily SD28_RS03820 IPR001107 Band 7 domain SD28_RS03820 IPR036013 Band 7/SPFH domain superfamily SD28_RS03820 IPR010201 HflK SD28_RS03820 IPR001972 Stomatin family SD28_RS03825 IPR010200 HflC SD28_RS03825 IPR036013 Band 7/SPFH domain superfamily SD28_RS03825 IPR001107 Band 7 domain SD28_RS03830 IPR017867 Protein-tyrosine phosphatase, low molecular weight SD28_RS03830 IPR023485 Phosphotyrosine protein phosphatase I SD28_RS03830 IPR036196 Phosphotyrosine protein phosphatase I superfamily SD28_RS03835 IPR030393 EngB-type guanine nucleotide-binding (G) domain SD28_RS03835 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC SD28_RS03835 IPR006073 GTP binding domain SD28_RS03835 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS03840 IPR003744 Queuosine precursor transporter SD28_RS03845 IPR018146 Glyoxalase I, conserved site SD28_RS03845 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SD28_RS03845 IPR037523 Vicinal oxygen chelate (VOC) domain SD28_RS03845 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SD28_RS03845 IPR004361 Glyoxalase I SD28_RS03860 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG SD28_RS03860 IPR031100 LOG family SD28_RS03865 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) SD28_RS03865 IPR036291 NAD(P)-binding domain superfamily SD28_RS03865 IPR002347 Short-chain dehydrogenase/reductase SDR SD28_RS03870 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type SD28_RS03870 IPR001347 Sugar isomerase (SIS) SD28_RS03870 IPR035474 KpsF-like, SIS domain SD28_RS03870 IPR000644 CBS domain SD28_RS03875 IPR013785 Aldolase-type TIM barrel SD28_RS03875 IPR011060 Ribulose-phosphate binding barrel SD28_RS03875 IPR026019 Ribulose-phosphate 3-epimerase SD28_RS03875 IPR000056 Ribulose-phosphate 3-epimerase-like SD28_RS03880 IPR029044 Nucleotide-diphospho-sugar transferases SD28_RS03880 IPR014710 RmlC-like jelly roll fold SD28_RS03880 IPR011051 RmlC-like cupin domain superfamily SD28_RS03880 IPR005835 Nucleotidyl transferase domain SD28_RS03880 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal SD28_RS03880 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase SD28_RS03890 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site SD28_RS03890 IPR029056 Ribokinase-like SD28_RS03890 IPR002139 Ribokinase/fructokinase SD28_RS03890 IPR011611 Carbohydrate kinase PfkB SD28_RS03895 IPR005320 Peptidase S51 SD28_RS03895 IPR029062 Class I glutamine amidotransferase-like SD28_RS03895 IPR011811 Peptidase S51, cyanophycinase SD28_RS03900 IPR029055 Nucleophile aminohydrolases, N-terminal SD28_RS03900 IPR000246 Peptidase T2, asparaginase 2 SD28_RS03940 IPR003752 Disulphide bond formation protein DsbB/BdbC SD28_RS03940 IPR022920 Disulphide bond formation protein DsbB SD28_RS03940 IPR023380 DsbB-like superfamily SD28_RS03945 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site SD28_RS03945 IPR001926 Pyridoxal-phosphate dependent enzyme SD28_RS03945 IPR023927 2,3-diaminopropionate biosynthesis protein SbnA SD28_RS03945 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme SD28_RS03955 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS03955 IPR005225 Small GTP-binding protein domain SD28_RS03955 IPR025867 MnmE, helical domain SD28_RS03955 IPR027368 tRNA modification GTPase MnmE domain 2 SD28_RS03955 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 SD28_RS03955 IPR031168 TrmE-type guanine nucleotide-binding domain SD28_RS03955 IPR018948 GTP-binding protein TrmE, N-terminal SD28_RS03955 IPR006073 GTP binding domain SD28_RS03955 IPR004520 tRNA modification GTPase MnmE SD28_RS03965 IPR036567 Ribosome hibernation promotion factor-like SD28_RS03965 IPR003489 Ribosome hibernation promoting factor/RaiA SD28_RS03975 IPR004384 RNA methyltransferase TrmJ/LasT SD28_RS03975 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SD28_RS03975 IPR029028 Alpha/beta knot methyltransferases SD28_RS03975 IPR001537 tRNA/rRNA methyltransferase, SpoU type SD28_RS03980 IPR022898 Ribonuclease HII SD28_RS03980 IPR001352 Ribonuclease HII/HIII SD28_RS03980 IPR024567 Ribonuclease HII/HIII domain SD28_RS03980 IPR012337 Ribonuclease H-like superfamily SD28_RS03980 IPR036397 Ribonuclease H superfamily SD28_RS03995 IPR023035 Ribosomal protein S9, bacterial/plastid SD28_RS03995 IPR000754 Ribosomal protein S9 SD28_RS03995 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SD28_RS03995 IPR020568 Ribosomal protein S5 domain 2-type fold SD28_RS03995 IPR020574 Ribosomal protein S9, conserved site SD28_RS04000 IPR023563 Ribosomal protein L13, conserved site SD28_RS04000 IPR005823 Ribosomal protein L13, bacterial-type SD28_RS04000 IPR036899 Ribosomal protein L13 superfamily SD28_RS04000 IPR005822 Ribosomal protein L13 SD28_RS04005 IPR004379 UDP-galactopyranose mutase SD28_RS04005 IPR015899 UDP-galactopyranose mutase, C-terminal SD28_RS04005 IPR036188 FAD/NAD(P)-binding domain superfamily SD28_RS04010 IPR010611 3D domain SD28_RS04010 IPR026044 Membrane-bound lytic murein transglycosylase A SD28_RS04010 IPR036908 RlpA-like domain superfamily SD28_RS04010 IPR034654 MltA, 3D domain SD28_RS04010 IPR005300 Lytic transglycosylase MltA, domain B SD28_RS04015 IPR009012 GrpE nucleotide exchange factor, head SD28_RS04015 IPR000740 GrpE nucleotide exchange factor SD28_RS04015 IPR013805 GrpE nucleotide exchange factor, coiled-coil SD28_RS04020 IPR013126 Heat shock protein 70 family SD28_RS04020 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily SD28_RS04020 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily SD28_RS04020 IPR018181 Heat shock protein 70, conserved site SD28_RS04020 IPR012725 Chaperone DnaK SD28_RS04025 IPR001305 Heat shock protein DnaJ, cysteine-rich domain SD28_RS04025 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily SD28_RS04025 IPR012724 Chaperone DnaJ SD28_RS04025 IPR008971 HSP40/DnaJ peptide-binding SD28_RS04025 IPR018253 DnaJ domain, conserved site SD28_RS04025 IPR001623 DnaJ domain SD28_RS04025 IPR036869 Chaperone J-domain superfamily SD28_RS04025 IPR002939 Chaperone DnaJ, C-terminal SD28_RS04030 IPR000700 PAS-associated, C-terminal SD28_RS04030 IPR029151 Periplasmic sensor-like domain superfamily SD28_RS04030 IPR035965 PAS domain superfamily SD28_RS04030 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily SD28_RS04030 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain SD28_RS04030 IPR000014 PAS domain SD28_RS04030 IPR005467 Histidine kinase domain SD28_RS04030 IPR003660 HAMP domain SD28_RS04030 IPR003594 Histidine kinase/HSP90-like ATPase SD28_RS04030 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SD28_RS04030 IPR004358 Signal transduction histidine kinase-related protein, C-terminal SD28_RS04035 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 SD28_RS04035 IPR015421 Pyridoxal phosphate-dependent transferase, major domain SD28_RS04035 IPR015424 Pyridoxal phosphate-dependent transferase SD28_RS04035 IPR004839 Aminotransferase, class I/classII SD28_RS04035 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site SD28_RS04045 IPR022310 NAD/GMP synthase SD28_RS04045 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SD28_RS04045 IPR022926 NH(3)-dependent NAD(+) synthetase SD28_RS04045 IPR003694 NAD(+) synthetase SD28_RS04055 IPR003423 Outer membrane efflux protein SD28_RS04055 IPR010131 RND efflux system, outer membrane lipoprotein, NodT SD28_RS04060 IPR039562 Membrane fusion protein, biotin-lipoyl like domain SD28_RS04065 IPR004638 Drug resistance transporter EmrB-like SD28_RS04065 IPR020846 Major facilitator superfamily domain SD28_RS04065 IPR011701 Major facilitator superfamily SD28_RS04065 IPR036259 MFS transporter superfamily SD28_RS04070 IPR000873 AMP-dependent synthetase/ligase SD28_RS04070 IPR025110 AMP-binding enzyme, C-terminal domain SD28_RS04070 IPR042099 AMP-dependent synthetase-like superfamily SD28_RS04070 IPR020845 AMP-binding, conserved site SD28_RS04075 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site SD28_RS04075 IPR036259 MFS transporter superfamily SD28_RS04075 IPR023778 Amino acid/peptide transporter family, dipeptide/tripeptide permease B SD28_RS04075 IPR000109 Proton-dependent oligopeptide transporter family SD28_RS04075 IPR005279 Dipeptide/tripeptide permease SD28_RS04080 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site SD28_RS04080 IPR000109 Proton-dependent oligopeptide transporter family SD28_RS04080 IPR005279 Dipeptide/tripeptide permease SD28_RS04080 IPR023778 Amino acid/peptide transporter family, dipeptide/tripeptide permease B SD28_RS04080 IPR036259 MFS transporter superfamily SD28_RS04085 IPR029028 Alpha/beta knot methyltransferases SD28_RS04085 IPR015947 PUA-like superfamily SD28_RS04085 IPR006700 Ribosomal RNA small subunit methyltransferase E SD28_RS04085 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SD28_RS04105 IPR003593 AAA+ ATPase domain SD28_RS04105 IPR003439 ABC transporter-like SD28_RS04105 IPR017871 ABC transporter, conserved site SD28_RS04105 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl SD28_RS04105 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS04110 IPR030802 ABC transporter permease MalE SD28_RS04110 IPR003453 ABC transport permease subunit MlaE, Proteobacteria SD28_RS04115 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain SD28_RS04120 IPR020103 Pseudouridine synthase, catalytic domain superfamily SD28_RS04120 IPR006225 Pseudouridine synthase, RluC/RluD SD28_RS04120 IPR006145 Pseudouridine synthase, RsuA/RluA SD28_RS04120 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site SD28_RS04120 IPR036986 RNA-binding S4 domain superfamily SD28_RS04120 IPR002942 RNA-binding S4 domain SD28_RS04125 IPR017689 Outer membrane protein assembly factor BamD SD28_RS04125 IPR039565 Outer membrane lipoprotein BamD-like SD28_RS04125 IPR011990 Tetratricopeptide-like helical domain superfamily SD28_RS04150 IPR036412 HAD-like superfamily SD28_RS04150 IPR023214 HAD superfamily SD28_RS04170 IPR000821 Alanine racemase SD28_RS04170 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal SD28_RS04170 IPR011079 Alanine racemase, C-terminal SD28_RS04170 IPR029066 PLP-binding barrel SD28_RS04170 IPR001608 Alanine racemase, N-terminal SD28_RS04175 IPR002293 Amino acid/polyamine transporter I SD28_RS04180 IPR001086 Prephenate dehydratase SD28_RS04180 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase SD28_RS04180 IPR036263 Chorismate mutase type II superfamily SD28_RS04180 IPR036979 Chorismate mutase domain superfamily SD28_RS04180 IPR002701 Chorismate mutase II, prokaryotic-type SD28_RS04180 IPR018528 Prephenate dehydratase, conserved site SD28_RS04180 IPR002912 ACT domain SD28_RS04190 IPR029009 Allosteric substrate binding domain superfamily SD28_RS04190 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form SD28_RS04190 IPR005130 Serine dehydratase-like, alpha subunit SD28_RS04190 IPR005131 Serine dehydratase beta chain SD28_RS04195 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site SD28_RS04195 IPR000192 Aminotransferase class V domain SD28_RS04195 IPR010970 Cysteine desulfurase, SufS SD28_RS04195 IPR015424 Pyridoxal phosphate-dependent transferase SD28_RS04195 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 SD28_RS04195 IPR015421 Pyridoxal phosphate-dependent transferase, major domain SD28_RS04200 IPR035903 HesB-like domain superfamily SD28_RS04200 IPR000361 FeS cluster biogenesis SD28_RS04200 IPR017870 FeS cluster insertion, C-terminal, conserved site SD28_RS04200 IPR011302 Iron-binding protein IscA, proteobacteria SD28_RS04200 IPR016092 FeS cluster insertion protein SD28_RS04205 IPR002744 MIP18 family-like SD28_RS04205 IPR034904 Fe-S cluster assembly domain superfamily SD28_RS04210 IPR004821 Cytidyltransferase-like domain SD28_RS04210 IPR001980 Phosphopantetheine adenylyltransferase SD28_RS04210 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SD28_RS04215 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SD28_RS04215 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SD28_RS04225 IPR006195 Aminoacyl-tRNA synthetase, class II SD28_RS04225 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily SD28_RS04225 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) SD28_RS04225 IPR033728 Threonine-tRNA ligase catalytic core domain SD28_RS04225 IPR036621 Anticodon-binding domain superfamily SD28_RS04225 IPR012676 TGS-like SD28_RS04225 IPR002320 Threonine-tRNA ligase, class IIa SD28_RS04225 IPR004095 TGS SD28_RS04225 IPR012675 Beta-grasp domain superfamily SD28_RS04225 IPR012947 Threonyl/alanyl tRNA synthetase, SAD SD28_RS04225 IPR004154 Anticodon-binding SD28_RS04230 IPR001288 Translation initiation factor 3 SD28_RS04230 IPR019815 Translation initiation factor 3, C-terminal SD28_RS04230 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily SD28_RS04230 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily SD28_RS04230 IPR019814 Translation initiation factor 3, N-terminal SD28_RS04235 IPR037229 Ribosomal protein L35 superfamily SD28_RS04235 IPR001706 Ribosomal protein L35, non-mitochondrial SD28_RS04235 IPR018265 Ribosomal protein L35, conserved site SD28_RS04235 IPR021137 Ribosomal protein L35 SD28_RS04240 IPR005813 Ribosomal protein L20 SD28_RS04240 IPR035566 Ribosomal protein L20, C-terminal SD28_RS04250 IPR004788 Ribose 5-phosphate isomerase, type A SD28_RS04250 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup SD28_RS04250 IPR037171 NagB/RpiA transferase-like SD28_RS04265 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG SD28_RS04265 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related SD28_RS04265 IPR026904 GidA associated domain 3 SD28_RS04265 IPR036188 FAD/NAD(P)-binding domain superfamily SD28_RS04265 IPR020595 MnmG-related, conserved site SD28_RS04290 IPR025668 Transposase DDE domain SD28_RS04295 IPR033134 Asp/Glu racemase, active site 2 SD28_RS04295 IPR001920 Asp/Glu racemase SD28_RS04295 IPR015942 Asp/Glu/hydantoin racemase SD28_RS04295 IPR004391 Glutamate racemase SD28_RS04305 IPR004807 UvrABC system, subunit B SD28_RS04305 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS04305 IPR001943 UVR domain SD28_RS04305 IPR006935 Helicase/UvrB, N-terminal SD28_RS04305 IPR036876 UVR domain superfamily SD28_RS04305 IPR001650 Helicase, C-terminal SD28_RS04305 IPR041471 UvrB, interaction domain SD28_RS04305 IPR014001 Helicase superfamily 1/2, ATP-binding domain SD28_RS04305 IPR024759 UvrB, YAD/RRR-motif-containing domain SD28_RS04310 IPR013620 Exodeoxyribonuclease I, C-terminal SD28_RS04310 IPR023607 Exodeoxyribonuclease I SD28_RS04310 IPR036397 Ribonuclease H superfamily SD28_RS04310 IPR012337 Ribonuclease H-like superfamily SD28_RS04310 IPR034748 Exonuclease I, C-terminal alpha-helical domain SD28_RS04310 IPR013520 Exonuclease, RNase T/DNA polymerase III SD28_RS04310 IPR034747 Exonuclease I, SH3-like domain SD28_RS04310 IPR038649 Exonuclease I, SH3-like domain superfamily SD28_RS04315 IPR025668 Transposase DDE domain SD28_RS04335 IPR003593 AAA+ ATPase domain SD28_RS04335 IPR017871 ABC transporter, conserved site SD28_RS04335 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal SD28_RS04335 IPR003439 ABC transporter-like SD28_RS04335 IPR030921 LPS export ABC transporter, ATP-binding protein LptB SD28_RS04335 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS04340 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily SD28_RS04340 IPR011234 Fumarylacetoacetase-like, C-terminal SD28_RS04345 IPR035994 Nucleoside phosphorylase superfamily SD28_RS04345 IPR000845 Nucleoside phosphorylase domain SD28_RS04345 IPR010044 Methylthioadenosine phosphorylase (MTAP) SD28_RS04350 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain SD28_RS04350 IPR001406 Pseudouridine synthase I, TruA SD28_RS04350 IPR020103 Pseudouridine synthase, catalytic domain superfamily SD28_RS04350 IPR020095 Pseudouridine synthase I, TruA, C-terminal SD28_RS04355 IPR003959 ATPase, AAA-type, core SD28_RS04355 IPR003593 AAA+ ATPase domain SD28_RS04355 IPR019489 Clp ATPase, C-terminal SD28_RS04355 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS04355 IPR004491 Heat shock protein HslU SD28_RS04360 IPR029055 Nucleophile aminohydrolases, N-terminal SD28_RS04360 IPR001353 Proteasome, subunit alpha/beta SD28_RS04360 IPR023333 Proteasome B-type subunit SD28_RS04360 IPR022281 ATP-dependent protease, HslV subunit SD28_RS04370 IPR023741 Lipoate-protein ligase A SD28_RS04370 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain SD28_RS04370 IPR004562 Lipoyltransferase/lipoate-protein ligase SD28_RS04370 IPR019491 Lipoate protein ligase, C-terminal SD28_RS04375 IPR036986 RNA-binding S4 domain superfamily SD28_RS04375 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 SD28_RS04375 IPR024088 Tyrosine-tRNA ligase, bacterial-type SD28_RS04375 IPR002307 Tyrosine-tRNA ligase SD28_RS04375 IPR002942 RNA-binding S4 domain SD28_RS04375 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SD28_RS04375 IPR002305 Aminoacyl-tRNA synthetase, class Ic SD28_RS04375 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site SD28_RS04390 IPR004114 THUMP domain SD28_RS04390 IPR002052 DNA methylase, N-6 adenine-specific, conserved site SD28_RS04390 IPR017244 Ribosomal RNA large subunit methyltransferase K/L SD28_RS04390 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SD28_RS04390 IPR019614 S-adenosylmethionine-dependent methyltransferase SD28_RS04390 IPR000241 Putative RNA methylase domain SD28_RS04400 IPR005794 Methionyl-tRNA formyltransferase SD28_RS04400 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain SD28_RS04400 IPR001555 Phosphoribosylglycinamide formyltransferase, active site SD28_RS04400 IPR011034 Formyl transferase-like, C-terminal domain superfamily SD28_RS04400 IPR002376 Formyl transferase, N-terminal SD28_RS04400 IPR005793 Formyl transferase, C-terminal SD28_RS04400 IPR037022 Formyl transferase, C-terminal domain superfamily SD28_RS04400 IPR036477 Formyl transferase, N-terminal domain superfamily SD28_RS04405 IPR011761 ATP-grasp fold SD28_RS04405 IPR013815 ATP-grasp fold, subdomain 1 SD28_RS04405 IPR006284 Glutathione synthetase, prokaryotic SD28_RS04405 IPR004215 Prokaryotic glutathione synthetase, N-terminal SD28_RS04405 IPR004218 Prokaryotic glutathione synthetase, ATP-binding SD28_RS04405 IPR016185 Pre-ATP-grasp domain superfamily SD28_RS04410 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase SD28_RS04410 IPR015421 Pyridoxal phosphate-dependent transferase, major domain SD28_RS04410 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 SD28_RS04410 IPR005814 Aminotransferase class-III SD28_RS04410 IPR015424 Pyridoxal phosphate-dependent transferase SD28_RS04415 IPR029058 Alpha/Beta hydrolase fold SD28_RS04415 IPR002168 Lipase, GDXG, putative histidine active site SD28_RS04415 IPR013094 Alpha/beta hydrolase fold-3 SD28_RS04415 IPR033140 Lipase, GDXG, putative serine active site SD28_RS04420 IPR000489 Pterin-binding domain SD28_RS04420 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily SD28_RS04420 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK SD28_RS04420 IPR006390 Dihydropteroate synthase SD28_RS04420 IPR011005 Dihydropteroate synthase-like SD28_RS04430 IPR025110 AMP-binding enzyme, C-terminal domain SD28_RS04430 IPR010192 2-succinylbenzoate--CoA ligase SD28_RS04430 IPR042099 AMP-dependent synthetase-like superfamily SD28_RS04430 IPR000873 AMP-dependent synthetase/ligase SD28_RS04435 IPR015890 Chorismate-utilising enzyme, C-terminal SD28_RS04435 IPR017926 Glutamine amidotransferase SD28_RS04435 IPR005801 ADC synthase SD28_RS04435 IPR006805 Anthranilate synthase component I, N-terminal SD28_RS04435 IPR029062 Class I glutamine amidotransferase-like SD28_RS04435 IPR005802 Aminodeoxychorismate synthase, component I SD28_RS04435 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain SD28_RS04440 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily SD28_RS04440 IPR000312 Glycosyl transferase, family 3 SD28_RS04440 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily SD28_RS04440 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain SD28_RS04440 IPR017459 Glycosyl transferase family 3, N-terminal domain SD28_RS04440 IPR017926 Glutamine amidotransferase SD28_RS04440 IPR029062 Class I glutamine amidotransferase-like SD28_RS04440 IPR005940 Anthranilate phosphoribosyl transferase SD28_RS04450 IPR036812 NADP-dependent oxidoreductase domain superfamily SD28_RS04450 IPR023210 NADP-dependent oxidoreductase domain SD28_RS04450 IPR020471 Aldo/keto reductase SD28_RS04455 IPR012337 Ribonuclease H-like superfamily SD28_RS04455 IPR036397 Ribonuclease H superfamily SD28_RS04455 IPR013520 Exonuclease, RNase T/DNA polymerase III SD28_RS04455 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain SD28_RS04455 IPR006309 DNA polymerase 3, epsilon subunit SD28_RS04470 IPR005097 Saccharopine dehydrogenase, NADP binding domain SD28_RS04470 IPR036291 NAD(P)-binding domain superfamily SD28_RS04470 IPR032095 Saccharopine dehydrogenase, C-terminal SD28_RS04475 IPR016160 Aldehyde dehydrogenase, cysteine active site SD28_RS04475 IPR016163 Aldehyde dehydrogenase, C-terminal SD28_RS04475 IPR015590 Aldehyde dehydrogenase domain SD28_RS04475 IPR016162 Aldehyde dehydrogenase, N-terminal SD28_RS04475 IPR029510 Aldehyde dehydrogenase, glutamic acid active site SD28_RS04475 IPR016161 Aldehyde/histidinol dehydrogenase SD28_RS04485 IPR038380 Ribosomal protein S21 superfamily SD28_RS04485 IPR018278 Ribosomal protein S21, conserved site SD28_RS04485 IPR001911 Ribosomal protein S21 SD28_RS04490 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like SD28_RS04490 IPR019004 Uncharacterised protein YqeY/Aim41 SD28_RS04490 IPR042184 YqeY/Aim41, N-terminal domain SD28_RS04490 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 SD28_RS04495 IPR034151 Bacterial DnaG primase, TOPRIM domain SD28_RS04495 IPR006171 TOPRIM domain SD28_RS04495 IPR002694 Zinc finger, CHC2-type SD28_RS04495 IPR030846 DNA primase DnaG, bacteria SD28_RS04495 IPR036977 DNA Primase, CHC2-type zinc finger SD28_RS04495 IPR013173 DNA primase DnaG, DnaB-binding domain SD28_RS04495 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal SD28_RS04495 IPR013264 DNA primase, catalytic core, N-terminal SD28_RS04495 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily SD28_RS04495 IPR019475 DNA primase, DnaB-helicase binding domain SD28_RS04495 IPR006295 DNA primase, DnaG SD28_RS04500 IPR000943 RNA polymerase sigma-70 SD28_RS04500 IPR009042 RNA polymerase sigma-70 region 1.2 SD28_RS04500 IPR013325 RNA polymerase sigma factor, region 2 SD28_RS04500 IPR014284 RNA polymerase sigma-70 like domain SD28_RS04500 IPR007630 RNA polymerase sigma-70 region 4 SD28_RS04500 IPR042189 Sigma-70 factor, region 1.1 superfamily SD28_RS04500 IPR007624 RNA polymerase sigma-70 region 3 SD28_RS04500 IPR012760 RNA polymerase sigma factor RpoD, C-terminal SD28_RS04500 IPR007631 RNA polymerase sigma factor 70, non-essential domain SD28_RS04500 IPR007127 RNA polymerase sigma factor 70, region 1.1 SD28_RS04500 IPR036388 Winged helix-like DNA-binding domain superfamily SD28_RS04500 IPR028630 RNA polymerase sigma factor RpoD SD28_RS04500 IPR007627 RNA polymerase sigma-70 region 2 SD28_RS04500 IPR013324 RNA polymerase sigma factor, region 3/4-like SD28_RS04505 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site SD28_RS04505 IPR039429 Serine hydroxymethyltransferase-like domain SD28_RS04505 IPR015421 Pyridoxal phosphate-dependent transferase, major domain SD28_RS04505 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 SD28_RS04505 IPR015424 Pyridoxal phosphate-dependent transferase SD28_RS04505 IPR001085 Serine hydroxymethyltransferase SD28_RS04510 IPR023153 PSPTO4464-like domain superfamily SD28_RS04510 IPR006839 Ribosome-associated, YjgA SD28_RS04515 IPR000092 Polyprenyl synthetase SD28_RS04515 IPR033749 Polyprenyl synthetase, conserved site SD28_RS04515 IPR008949 Isoprenoid synthase domain superfamily SD28_RS04545 IPR002524 Cation efflux protein SD28_RS04545 IPR027470 Cation efflux protein, cytoplasmic domain SD28_RS04545 IPR036837 Cation efflux protein, cytoplasmic domain superfamily SD28_RS04545 IPR027469 Cation efflux transmembrane domain superfamily SD28_RS04550 IPR005835 Nucleotidyl transferase domain SD28_RS04550 IPR029044 Nucleotide-diphospho-sugar transferases SD28_RS04550 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type SD28_RS04555 IPR011904 Acetate-CoA ligase SD28_RS04555 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain SD28_RS04555 IPR025110 AMP-binding enzyme, C-terminal domain SD28_RS04555 IPR020845 AMP-binding, conserved site SD28_RS04555 IPR000873 AMP-dependent synthetase/ligase SD28_RS04555 IPR042099 AMP-dependent synthetase-like superfamily SD28_RS04560 IPR000620 EamA domain SD28_RS04565 IPR004506 tRNA-specific 2-thiouridylase SD28_RS04565 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SD28_RS04565 IPR023382 Adenine nucleotide alpha hydrolase-like domains SD28_RS04570 IPR036868 TusA-like domain superfamily SD28_RS04570 IPR001455 TusA-like domain SD28_RS04575 IPR005651 Trm112-like SD28_RS04580 IPR029044 Nucleotide-diphospho-sugar transferases SD28_RS04580 IPR003329 Acylneuraminate cytidylyltransferase SD28_RS04580 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase SD28_RS04590 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site SD28_RS04590 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type SD28_RS04595 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain SD28_RS04595 IPR001650 Helicase, C-terminal SD28_RS04595 IPR014001 Helicase superfamily 1/2, ATP-binding domain SD28_RS04595 IPR034415 CsdA, RNA recognition motif SD28_RS04595 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily SD28_RS04595 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS04595 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SD28_RS04595 IPR028618 ATP-dependent RNA helicase DeaD SD28_RS04595 IPR014014 RNA helicase, DEAD-box type, Q motif SD28_RS04595 IPR011545 DEAD/DEAH box helicase domain SD28_RS04605 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase SD28_RS04605 IPR036188 FAD/NAD(P)-binding domain superfamily SD28_RS04610 IPR011761 ATP-grasp fold SD28_RS04615 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site SD28_RS04615 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain SD28_RS04615 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding SD28_RS04615 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SD28_RS04615 IPR015413 Methionyl/Leucyl tRNA synthetase SD28_RS04615 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding SD28_RS04615 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal SD28_RS04615 IPR029038 Methionyl-tRNA synthetase, Zn-domain SD28_RS04615 IPR012340 Nucleic acid-binding, OB-fold SD28_RS04615 IPR014758 Methionyl-tRNA synthetase SD28_RS04615 IPR002547 tRNA-binding domain SD28_RS04615 IPR033911 Methioninyl-tRNA synthetase core domain SD28_RS04615 IPR023458 Methionine-tRNA ligase, type 1 SD28_RS04635 IPR005829 Sugar transporter, conserved site SD28_RS04635 IPR036259 MFS transporter superfamily SD28_RS04635 IPR020846 Major facilitator superfamily domain SD28_RS04635 IPR011701 Major facilitator superfamily SD28_RS04635 IPR004812 Drug resistance transporter Bcr/CmlA subfamily SD28_RS04640 IPR017665 Guanylate kinase SD28_RS04640 IPR008145 Guanylate kinase/L-type calcium channel beta subunit SD28_RS04640 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS04640 IPR008144 Guanylate kinase-like domain SD28_RS04645 IPR013196 Helix-turn-helix, type 11 SD28_RS04645 IPR004408 Biotin--acetyl-CoA-carboxylase ligase SD28_RS04645 IPR030855 Bifunctional ligase/repressor BirA SD28_RS04645 IPR003142 Biotin protein ligase, C-terminal SD28_RS04645 IPR036390 Winged helix DNA-binding domain superfamily SD28_RS04645 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain SD28_RS04645 IPR036388 Winged helix-like DNA-binding domain superfamily SD28_RS04645 IPR008988 Transcriptional repressor, C-terminal SD28_RS04645 IPR004409 Biotin operon repressor, helix-turn-helix domain SD28_RS04650 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS04650 IPR004472 Dethiobiotin synthase BioD SD28_RS04655 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SD28_RS04655 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC SD28_RS04655 IPR025714 Methyltransferase domain SD28_RS04660 IPR004839 Aminotransferase, class I/classII SD28_RS04660 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site SD28_RS04660 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 SD28_RS04660 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type SD28_RS04660 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria SD28_RS04660 IPR015424 Pyridoxal phosphate-dependent transferase SD28_RS04660 IPR015421 Pyridoxal phosphate-dependent transferase, major domain SD28_RS04665 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB SD28_RS04665 IPR006638 Elp3/MiaB/NifB SD28_RS04665 IPR024177 Biotin synthase SD28_RS04665 IPR010722 Biotin and thiamin synthesis-associated domain SD28_RS04665 IPR007197 Radical SAM SD28_RS04665 IPR013785 Aldolase-type TIM barrel SD28_RS04670 IPR015421 Pyridoxal phosphate-dependent transferase, major domain SD28_RS04670 IPR005814 Aminotransferase class-III SD28_RS04670 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA SD28_RS04670 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 SD28_RS04670 IPR015424 Pyridoxal phosphate-dependent transferase SD28_RS04675 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal SD28_RS04675 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SD28_RS04675 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal SD28_RS04675 IPR012094 tRNA(Ile)-lysidine synthase SD28_RS04675 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal SD28_RS04675 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain SD28_RS04680 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain SD28_RS04680 IPR036291 NAD(P)-binding domain superfamily SD28_RS04680 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site SD28_RS04680 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 SD28_RS04680 IPR002912 ACT domain SD28_RS04680 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SD28_RS04685 IPR000398 Thymidylate synthase SD28_RS04685 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily SD28_RS04685 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain SD28_RS04690 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt SD28_RS04695 IPR022967 RNA-binding domain, S1 SD28_RS04695 IPR003029 S1 domain SD28_RS04695 IPR004659 Ribonuclease E/G SD28_RS04695 IPR028878 Ribonuclease E SD28_RS04695 IPR012340 Nucleic acid-binding, OB-fold SD28_RS04695 IPR021968 Polyribonucleotide phosphorylase C-terminal SD28_RS04695 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G SD28_RS04700 IPR010240 Cysteine desulfurase IscS SD28_RS04700 IPR016454 Cysteine desulfurase SD28_RS04700 IPR015424 Pyridoxal phosphate-dependent transferase SD28_RS04700 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site SD28_RS04700 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 SD28_RS04700 IPR015421 Pyridoxal phosphate-dependent transferase, major domain SD28_RS04700 IPR000192 Aminotransferase class V domain SD28_RS04710 IPR003717 Recombination protein O, RecO SD28_RS04710 IPR012340 Nucleic acid-binding, OB-fold SD28_RS04710 IPR022572 DNA replication/recombination mediator RecO, N-terminal SD28_RS04715 IPR032816 SNARE associated Golgi protein SD28_RS04715 IPR032818 DedA family SD28_RS04720 IPR032818 DedA family SD28_RS04720 IPR032816 SNARE associated Golgi protein SD28_RS04730 IPR037171 NagB/RpiA transferase-like SD28_RS04730 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily SD28_RS04730 IPR002698 5-formyltetrahydrofolate cyclo-ligase SD28_RS04735 IPR001238 DNA-binding, RecF SD28_RS04735 IPR003395 RecF/RecN/SMC, N-terminal SD28_RS04735 IPR018078 DNA-binding, RecF, conserved site SD28_RS04735 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS04735 IPR042174 DNA-binding RecF, domain 2 SD28_RS04740 IPR032466 Metal-dependent hydrolase SD28_RS04740 IPR018228 Deoxyribonuclease, TatD-related, conserved site SD28_RS04740 IPR015991 Uncharacterised hydrolase TatD-type SD28_RS04740 IPR001130 TatD family SD28_RS04745 IPR008909 DALR anticodon binding SD28_RS04745 IPR015944 Glycine-tRNA ligase, beta subunit SD28_RS04745 IPR006194 Glycine-tRNA synthetase, heterodimeric SD28_RS04750 IPR004812 Drug resistance transporter Bcr/CmlA subfamily SD28_RS04750 IPR011701 Major facilitator superfamily SD28_RS04750 IPR020846 Major facilitator superfamily domain SD28_RS04750 IPR036259 MFS transporter superfamily SD28_RS04750 IPR004734 Multidrug resistance protein SD28_RS04755 IPR036397 Ribonuclease H superfamily SD28_RS04755 IPR002562 3'-5' exonuclease domain SD28_RS04755 IPR010997 HRDC-like superfamily SD28_RS04755 IPR002121 HRDC domain SD28_RS04755 IPR006292 Ribonuclease D SD28_RS04755 IPR012337 Ribonuclease H-like superfamily SD28_RS04760 IPR038476 UvrC homology region 2 superfamily SD28_RS04760 IPR035901 GIY-YIG endonuclease superfamily SD28_RS04760 IPR010994 RuvA domain 2-like SD28_RS04760 IPR001943 UVR domain SD28_RS04760 IPR000305 GIY-YIG endonuclease SD28_RS04760 IPR036876 UVR domain superfamily SD28_RS04760 IPR004791 UvrABC system, subunit C SD28_RS04760 IPR001162 UvrC family homology region SD28_RS04765 IPR003798 DNA recombination RmuC SD28_RS04770 IPR016193 Cytidine deaminase-like SD28_RS04770 IPR028883 tRNA-specific adenosine deaminase SD28_RS04770 IPR002125 Cytidine and deoxycytidylate deaminase domain SD28_RS04770 IPR016192 APOBEC/CMP deaminase, zinc-binding SD28_RS04775 IPR036380 Isochorismatase-like superfamily SD28_RS04775 IPR000868 Isochorismatase-like SD28_RS04780 IPR006153 Cation/H+ exchanger SD28_RS04780 IPR004771 K+/H+ exchanger SD28_RS04780 IPR038770 Sodium/solute symporter superfamily SD28_RS04785 IPR000620 EamA domain SD28_RS04790 IPR028896 Aminomethyltransferase-like SD28_RS04790 IPR017703 YgfZ/GcvT conserved site SD28_RS04790 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal SD28_RS04790 IPR006222 Aminomethyltransferase, folate-binding domain SD28_RS04795 IPR005752 ATP-dependent DNA helicase Rep SD28_RS04795 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS04795 IPR034739 UvrD/AddA helicase, N-terminal SD28_RS04795 IPR013986 DExx box DNA helicase domain superfamily SD28_RS04795 IPR014017 UvrD-like DNA helicase, C-terminal SD28_RS04795 IPR000212 DNA helicase, UvrD/REP type SD28_RS04795 IPR014016 UvrD-like helicase, ATP-binding domain SD28_RS04800 IPR020846 Major facilitator superfamily domain SD28_RS04800 IPR005828 Major facilitator, sugar transporter-like SD28_RS04800 IPR005829 Sugar transporter, conserved site SD28_RS04800 IPR036259 MFS transporter superfamily SD28_RS04800 IPR003663 Sugar/inositol transporter SD28_RS04805 IPR040503 UPF0176, acylphosphatase-like domain SD28_RS04805 IPR020936 Uncharacterised protein family UPF0176 SD28_RS04805 IPR036873 Rhodanese-like domain superfamily SD28_RS04805 IPR001763 Rhodanese-like domain SD28_RS04815 IPR018951 Fumarase C, C-terminal SD28_RS04815 IPR008948 L-Aspartase-like SD28_RS04815 IPR005677 Fumarate hydratase, class II SD28_RS04815 IPR000362 Fumarate lyase family SD28_RS04815 IPR020557 Fumarate lyase, conserved site SD28_RS04815 IPR022761 Fumarate lyase, N-terminal SD28_RS04815 IPR024083 Fumarase/histidase, N-terminal SD28_RS04820 IPR036513 STAS domain superfamily SD28_RS04820 IPR002645 STAS domain SD28_RS04820 IPR001902 SLC26A/SulP transporter SD28_RS04820 IPR011547 SLC26A/SulP transporter domain SD28_RS04820 IPR018045 Sulphate anion transporter, conserved site SD28_RS04835 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain SD28_RS04835 IPR020605 Octanoyltransferase, conserved site SD28_RS04835 IPR000544 Octanoyltransferase SD28_RS04840 IPR007454 Uncharacterised protein family UPF0250 SD28_RS04840 IPR027471 YbeD-like domain superfamily SD28_RS04845 IPR015956 Penicillin-binding protein, C-terminal domain superfamily SD28_RS04845 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A SD28_RS04845 IPR012338 Beta-lactamase/transpeptidase-like SD28_RS04845 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal SD28_RS04845 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily SD28_RS04845 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal SD28_RS04850 IPR008162 Inorganic pyrophosphatase SD28_RS04850 IPR036649 Inorganic pyrophosphatase superfamily SD28_RS04855 IPR025824 OB-fold nucleic acid binding domain SD28_RS04855 IPR003753 Exonuclease VII, large subunit SD28_RS04855 IPR020579 Exonuclease VII, large subunit, C-terminal SD28_RS04865 IPR023777 Amino acid/peptide transporter family, dipeptide permease D SD28_RS04865 IPR005279 Dipeptide/tripeptide permease SD28_RS04865 IPR020846 Major facilitator superfamily domain SD28_RS04865 IPR036259 MFS transporter superfamily SD28_RS04865 IPR000109 Proton-dependent oligopeptide transporter family SD28_RS04865 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site SD28_RS04875 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SD28_RS04875 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal SD28_RS04875 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase SD28_RS04875 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type SD28_RS04880 IPR023620 Small protein B SD28_RS04880 IPR020081 SsrA-binding protein, conserved site SD28_RS04880 IPR000037 SsrA-binding protein SD28_RS04885 IPR023393 START-like domain superfamily SD28_RS04885 IPR005031 Coenzyme Q-binding protein COQ10, START domain SD28_RS04890 IPR037021 RnfH superfamily SD28_RS04890 IPR005346 RnfH protein SD28_RS04890 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp SD28_RS04895 IPR002686 Transposase IS200-like SD28_RS04895 IPR036515 Transposase IS200-like superfamily SD28_RS04900 IPR008471 MnmC-like methyltransferase SD28_RS04900 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal SD28_RS04900 IPR006076 FAD dependent oxidoreductase SD28_RS04900 IPR036188 FAD/NAD(P)-binding domain superfamily SD28_RS04900 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC SD28_RS04910 IPR042116 GTP-binding protein TypA/BipA, C-terminal SD28_RS04910 IPR009000 Translation protein, beta-barrel domain superfamily SD28_RS04910 IPR006298 GTP-binding protein TypA SD28_RS04910 IPR000795 Transcription factor, GTP-binding domain SD28_RS04910 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS04910 IPR031157 Tr-type G domain, conserved site SD28_RS04910 IPR004161 Translation elongation factor EFTu-like, domain 2 SD28_RS04910 IPR000640 Elongation factor EFG, domain V-like SD28_RS04910 IPR035647 EF-G domain III/V-like SD28_RS04910 IPR035651 BipA, domain V SD28_RS04910 IPR005225 Small GTP-binding protein domain SD28_RS04915 IPR006219 DHAP synthase, class 1 SD28_RS04915 IPR006218 DAHP synthetase I/KDSA SD28_RS04915 IPR013785 Aldolase-type TIM barrel SD28_RS04920 IPR022941 Signal recognition particle, SRP54 subunit SD28_RS04920 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain SD28_RS04920 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS04920 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily SD28_RS04920 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily SD28_RS04920 IPR004125 Signal recognition particle, SRP54 subunit, M-domain SD28_RS04920 IPR003593 AAA+ ATPase domain SD28_RS04920 IPR004780 Signal recognition particle protein SD28_RS04920 IPR013822 Signal recognition particle SRP54, helical bundle SD28_RS04930 IPR002781 Transmembrane protein TauE-like SD28_RS04935 IPR006196 RNA-binding domain, S1, IF1 type SD28_RS04935 IPR004368 Translation initiation factor IF-1 SD28_RS04935 IPR022967 RNA-binding domain, S1 SD28_RS04935 IPR012340 Nucleic acid-binding, OB-fold SD28_RS04950 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS04950 IPR032781 ABC-transporter extension domain SD28_RS04950 IPR003593 AAA+ ATPase domain SD28_RS04950 IPR017871 ABC transporter, conserved site SD28_RS04950 IPR003439 ABC transporter-like SD28_RS04955 IPR001537 tRNA/rRNA methyltransferase, SpoU type SD28_RS04955 IPR029028 Alpha/beta knot methyltransferases SD28_RS04955 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SD28_RS04955 IPR013123 RNA 2-O ribose methyltransferase, substrate binding SD28_RS04955 IPR029064 50S ribosomal protein L30e-like SD28_RS04960 IPR008978 HSP20-like chaperone SD28_RS04960 IPR002068 Alpha crystallin/Hsp20 domain SD28_RS04965 IPR000644 CBS domain SD28_RS04965 IPR005990 Inosine-5'-monophosphate dehydrogenase SD28_RS04965 IPR013785 Aldolase-type TIM barrel SD28_RS04965 IPR015875 IMP dehydrogenase / GMP reductase, conserved site SD28_RS04965 IPR001093 IMP dehydrogenase/GMP reductase SD28_RS04980 IPR002513 Tn3 transposase DDE domain SD28_RS04980 IPR025296 Domain of unknown function DUF4158 SD28_RS04985 IPR006118 Recombinase, conserved site SD28_RS04985 IPR006120 Resolvase, HTH domain SD28_RS04985 IPR006119 Resolvase, N-terminal catalytic domain SD28_RS04985 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily SD28_RS04985 IPR009057 Homeobox-like domain superfamily SD28_RS04990 IPR012349 FMN-binding split barrel SD28_RS04990 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal SD28_RS04990 IPR000659 Pyridoxamine 5'-phosphate oxidase SD28_RS04990 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative SD28_RS04990 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site SD28_RS04995 IPR009057 Homeobox-like domain superfamily SD28_RS04995 IPR001598 Transposase, IS30, conserved site SD28_RS04995 IPR012337 Ribonuclease H-like superfamily SD28_RS04995 IPR001584 Integrase, catalytic core SD28_RS04995 IPR036397 Ribonuclease H superfamily SD28_RS05005 IPR002569 Peptide methionine sulphoxide reductase MsrA SD28_RS05005 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily SD28_RS05010 IPR036259 MFS transporter superfamily SD28_RS05010 IPR020846 Major facilitator superfamily domain SD28_RS05010 IPR011701 Major facilitator superfamily SD28_RS05010 IPR004812 Drug resistance transporter Bcr/CmlA subfamily SD28_RS05030 IPR009057 Homeobox-like domain superfamily SD28_RS05030 IPR001584 Integrase, catalytic core SD28_RS05030 IPR001598 Transposase, IS30, conserved site SD28_RS05030 IPR012337 Ribonuclease H-like superfamily SD28_RS05030 IPR036397 Ribonuclease H superfamily SD28_RS05040 IPR013542 Domain of unknown function DUF1730 SD28_RS05040 IPR004453 Epoxyqueuosine reductase QueG SD28_RS05040 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SD28_RS05040 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SD28_RS05045 IPR004394 Protein Iojap/ribosomal silencing factor RsfS SD28_RS05055 IPR000212 DNA helicase, UvrD/REP type SD28_RS05055 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS05055 IPR013986 DExx box DNA helicase domain superfamily SD28_RS05055 IPR034739 UvrD/AddA helicase, N-terminal SD28_RS05055 IPR014016 UvrD-like helicase, ATP-binding domain SD28_RS05055 IPR014017 UvrD-like DNA helicase, C-terminal SD28_RS05065 IPR037944 Peroxiredoxin-5-like SD28_RS05065 IPR011767 Glutaredoxin active site SD28_RS05065 IPR002109 Glutaredoxin SD28_RS05065 IPR036249 Thioredoxin-like superfamily SD28_RS05065 IPR013740 Redoxin SD28_RS05065 IPR011906 Glutaredoxin domain SD28_RS05065 IPR014025 Glutaredoxin subgroup SD28_RS05070 IPR011900 Glutaredoxin, GrxC SD28_RS05070 IPR014025 Glutaredoxin subgroup SD28_RS05070 IPR036249 Thioredoxin-like superfamily SD28_RS05070 IPR002109 Glutaredoxin SD28_RS05070 IPR011767 Glutaredoxin active site SD28_RS05075 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal SD28_RS05075 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent SD28_RS05075 IPR013509 Ribonucleotide reductase large subunit, N-terminal SD28_RS05075 IPR000788 Ribonucleotide reductase large subunit, C-terminal SD28_RS05075 IPR005144 ATP-cone domain SD28_RS05080 IPR036291 NAD(P)-binding domain superfamily SD28_RS05080 IPR001557 L-lactate/malate dehydrogenase SD28_RS05080 IPR022383 Lactate/malate dehydrogenase, C-terminal SD28_RS05080 IPR001236 Lactate/malate dehydrogenase, N-terminal SD28_RS05080 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal SD28_RS05080 IPR011275 Malate dehydrogenase, type 3 SD28_RS05090 IPR011566 Ubiquinone biosynthesis protein Coq7 SD28_RS05090 IPR009078 Ferritin-like superfamily SD28_RS05090 IPR012347 Ferritin-like SD28_RS05095 IPR035985 Ubiquitin-activating enzyme SD28_RS05095 IPR000594 THIF-type NAD/FAD binding fold SD28_RS05100 IPR019479 Peroxiredoxin, C-terminal SD28_RS05100 IPR024706 Peroxiredoxin, AhpC-type SD28_RS05100 IPR036249 Thioredoxin-like superfamily SD28_RS05100 IPR013766 Thioredoxin domain SD28_RS05100 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant SD28_RS05110 IPR013987 PhnA protein, N-terminal SD28_RS05110 IPR013988 PhnA protein, C-terminal SD28_RS05110 IPR004624 PhnA protein SD28_RS05115 IPR020602 GTP cyclohydrolase I domain SD28_RS05115 IPR018234 GTP cyclohydrolase I, conserved site SD28_RS05115 IPR001474 GTP cyclohydrolase I SD28_RS05120 IPR014014 RNA helicase, DEAD-box type, Q motif SD28_RS05120 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SD28_RS05120 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS05120 IPR001650 Helicase, C-terminal SD28_RS05120 IPR014001 Helicase superfamily 1/2, ATP-binding domain SD28_RS05120 IPR011545 DEAD/DEAH box helicase domain SD28_RS05120 IPR028622 ATP-dependent RNA helicase RhlE SD28_RS05135 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain SD28_RS05135 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily SD28_RS05140 IPR017853 Glycoside hydrolase superfamily SD28_RS05140 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily SD28_RS05140 IPR001764 Glycoside hydrolase, family 3, N-terminal SD28_RS05140 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily SD28_RS05140 IPR002772 Glycoside hydrolase family 3 C-terminal domain SD28_RS05140 IPR019800 Glycoside hydrolase, family 3, active site SD28_RS05145 IPR011294 3-hydroxybutyrate dehydrogenase SD28_RS05145 IPR036291 NAD(P)-binding domain superfamily SD28_RS05145 IPR020904 Short-chain dehydrogenase/reductase, conserved site SD28_RS05145 IPR002347 Short-chain dehydrogenase/reductase SDR SD28_RS05150 IPR010451 Acetoacetate decarboxylase SD28_RS05150 IPR023653 Acetoacetate decarboxylase, bacterial SD28_RS05150 IPR023375 Acetoacetate decarboxylase domain superfamily SD28_RS05160 IPR032466 Metal-dependent hydrolase SD28_RS05160 IPR028893 Adenosine deaminase SD28_RS05160 IPR006330 Adenosine/adenine deaminase SD28_RS05160 IPR001365 Adenosine/AMP deaminase domain SD28_RS05170 IPR029062 Class I glutamine amidotransferase-like SD28_RS05170 IPR017926 Glutamine amidotransferase SD28_RS05170 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SD28_RS05170 IPR001674 GMP synthase, C-terminal SD28_RS05170 IPR022955 GMP synthase SD28_RS05170 IPR025777 GMP synthetase ATP pyrophosphatase domain SD28_RS05170 IPR022310 NAD/GMP synthase SD28_RS05170 IPR004739 GMP synthase, glutamine amidotransferase SD28_RS05175 IPR005474 Transketolase, N-terminal SD28_RS05175 IPR005475 Transketolase-like, pyrimidine-binding domain SD28_RS05175 IPR033248 Transketolase, C-terminal domain SD28_RS05175 IPR020826 Transketolase binding site SD28_RS05175 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II SD28_RS05175 IPR029061 Thiamin diphosphate-binding fold SD28_RS05175 IPR005477 Deoxyxylulose-5-phosphate synthase SD28_RS05185 IPR036390 Winged helix DNA-binding domain superfamily SD28_RS05185 IPR041445 RuvB, AAA lid domain SD28_RS05185 IPR004605 DNA helicase, Holliday junction RuvB-type SD28_RS05185 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS05185 IPR008824 RuvB-like P-loop domain SD28_RS05185 IPR008823 RuvB C-terminal winged helix domain SD28_RS05185 IPR003593 AAA+ ATPase domain SD28_RS05185 IPR036388 Winged helix-like DNA-binding domain superfamily SD28_RS05205 IPR005829 Sugar transporter, conserved site SD28_RS05205 IPR020846 Major facilitator superfamily domain SD28_RS05205 IPR036259 MFS transporter superfamily SD28_RS05205 IPR005828 Major facilitator, sugar transporter-like SD28_RS05205 IPR003663 Sugar/inositol transporter SD28_RS05210 IPR003766 Uronate isomerase SD28_RS05210 IPR032466 Metal-dependent hydrolase SD28_RS05215 IPR031338 KDPG/KHG aldolase, active site 2 SD28_RS05215 IPR031337 KDPG/KHG aldolase, active site 1 SD28_RS05215 IPR000887 KDPG/KHG aldolase SD28_RS05215 IPR013785 Aldolase-type TIM barrel SD28_RS05220 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site SD28_RS05220 IPR029056 Ribokinase-like SD28_RS05220 IPR011611 Carbohydrate kinase PfkB SD28_RS05225 IPR036237 Xylose isomerase-like superfamily SD28_RS05225 IPR004628 Mannonate dehydratase SD28_RS05230 IPR013328 6-phosphogluconate dehydrogenase, domain 2 SD28_RS05230 IPR000669 Mannitol dehydrogenase SD28_RS05230 IPR013118 Mannitol dehydrogenase, C-terminal SD28_RS05230 IPR023027 Mannitol dehydrogenase, conserved site SD28_RS05230 IPR013131 Mannitol dehydrogenase, N-terminal SD28_RS05230 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily SD28_RS05230 IPR036291 NAD(P)-binding domain superfamily SD28_RS05245 IPR023778 Amino acid/peptide transporter family, dipeptide/tripeptide permease B SD28_RS05245 IPR005279 Dipeptide/tripeptide permease SD28_RS05245 IPR036259 MFS transporter superfamily SD28_RS05245 IPR000109 Proton-dependent oligopeptide transporter family SD28_RS05245 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site SD28_RS05250 IPR036188 FAD/NAD(P)-binding domain superfamily SD28_RS05250 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site SD28_RS05250 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SD28_RS05250 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I SD28_RS05250 IPR006322 Glutathione reductase, eukaryote/bacterial SD28_RS05250 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily SD28_RS05250 IPR023753 FAD/NAD(P)-binding domain SD28_RS05255 IPR004808 AP endonuclease 1 SD28_RS05255 IPR005135 Endonuclease/exonuclease/phosphatase SD28_RS05255 IPR036691 Endonuclease/exonuclease/phosphatase superfamily SD28_RS05255 IPR020848 AP endonuclease 1, conserved site SD28_RS05255 IPR020847 AP endonuclease 1, binding site SD28_RS05260 IPR006195 Aminoacyl-tRNA synthetase, class II SD28_RS05260 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit SD28_RS05260 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal SD28_RS05260 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm SD28_RS05260 IPR002319 Phenylalanyl-tRNA synthetase SD28_RS05260 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial SD28_RS05265 IPR038717 Tc1-like transposase, DDE domain SD28_RS05285 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain SD28_RS05285 IPR005147 tRNA synthetase, B5-domain SD28_RS05285 IPR002547 tRNA-binding domain SD28_RS05285 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain SD28_RS05285 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 SD28_RS05285 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit SD28_RS05285 IPR012340 Nucleic acid-binding, OB-fold SD28_RS05285 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily SD28_RS05285 IPR005121 Ferrodoxin-fold anticodon-binding domain SD28_RS05285 IPR009061 Putative DNA-binding domain superfamily SD28_RS05285 IPR005146 B3/B4 tRNA-binding domain SD28_RS05290 IPR027379 Cardiolipin synthase N-terminal SD28_RS05290 IPR025202 Phospholipase D-like domain SD28_RS05290 IPR001736 Phospholipase D/Transphosphatidylase SD28_RS05290 IPR030874 Cardiolipin synthase, Firmicutes-type SD28_RS05290 IPR022924 Cardiolipin synthase SD28_RS05295 IPR019591 Mrp/NBP35 ATP-binding protein SD28_RS05295 IPR000808 Mrp, conserved site SD28_RS05295 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS05295 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 SD28_RS05300 IPR029054 dUTPase-like SD28_RS05300 IPR011962 dCTP deaminase SD28_RS05300 IPR036157 dUTPase-like superfamily SD28_RS05300 IPR033704 dUTPase, trimeric SD28_RS05305 IPR030192 Miniconductance mechanosensitive channel YbdG SD28_RS05305 IPR010920 LSM domain superfamily SD28_RS05305 IPR006685 Mechanosensitive ion channel MscS SD28_RS05305 IPR011066 Mechanosensitive ion channel MscS, C-terminal SD28_RS05315 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain SD28_RS05315 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding SD28_RS05315 IPR002302 Leucine-tRNA ligase SD28_RS05315 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SD28_RS05315 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding SD28_RS05315 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site SD28_RS05315 IPR002300 Aminoacyl-tRNA synthetase, class Ia SD28_RS05315 IPR025709 Leucyl-tRNA synthetase, editing domain SD28_RS05320 IPR012337 Ribonuclease H-like superfamily SD28_RS05320 IPR005227 Putative pre-16S rRNA nuclease SD28_RS05320 IPR037027 YqgF/RNase H-like domain superfamily SD28_RS05320 IPR006641 YqgF/RNase H-like domain SD28_RS05325 IPR003774 Protein of unknown function UPF0301 SD28_RS05330 IPR003561 Mutator MutT SD28_RS05330 IPR000086 NUDIX hydrolase domain SD28_RS05330 IPR020084 NUDIX hydrolase, conserved site SD28_RS05330 IPR015797 NUDIX hydrolase-like domain superfamily SD28_RS05330 IPR020476 NUDIX hydrolase SD28_RS05345 IPR013766 Thioredoxin domain SD28_RS05345 IPR017937 Thioredoxin, conserved site SD28_RS05345 IPR036249 Thioredoxin-like superfamily SD28_RS05345 IPR005746 Thioredoxin SD28_RS05355 IPR000825 SUF system FeS cluster assembly, SufBD SD28_RS05355 IPR037284 SUF system FeS cluster assembly, SufBD superfamily SD28_RS05355 IPR011542 SUF system FeS cluster assembly, SufD SD28_RS05360 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS05360 IPR003593 AAA+ ATPase domain SD28_RS05360 IPR003439 ABC transporter-like SD28_RS05360 IPR017871 ABC transporter, conserved site SD28_RS05360 IPR010230 FeS cluster assembly SUF system, ATPase SufC SD28_RS05365 IPR037284 SUF system FeS cluster assembly, SufBD superfamily SD28_RS05365 IPR000825 SUF system FeS cluster assembly, SufBD SD28_RS05365 IPR010231 SUF system FeS cluster assembly, SufB SD28_RS05370 IPR030489 Transcription regulator Rrf2-type, conserved site SD28_RS05370 IPR000944 Transcription regulator Rrf2-type SD28_RS05370 IPR036388 Winged helix-like DNA-binding domain superfamily SD28_RS05370 IPR036390 Winged helix DNA-binding domain superfamily SD28_RS05375 IPR036291 NAD(P)-binding domain superfamily SD28_RS05375 IPR006037 Regulator of K+ conductance, C-terminal SD28_RS05375 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily SD28_RS05375 IPR003148 Regulator of K+ conductance, N-terminal SD28_RS05375 IPR006036 Potassium uptake protein TrkA SD28_RS05380 IPR002293 Amino acid/polyamine transporter I SD28_RS05390 IPR018225 Transaldolase, active site SD28_RS05390 IPR004730 Transaldolase type 1 SD28_RS05390 IPR001585 Transaldolase/Fructose-6-phosphate aldolase SD28_RS05390 IPR013785 Aldolase-type TIM barrel SD28_RS05395 IPR001346 Interferon regulatory factor DNA-binding domain SD28_RS05395 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B SD28_RS05395 IPR008330 Peptidase M17, peptidase B SD28_RS05395 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal SD28_RS05405 IPR003156 DHHA1 domain SD28_RS05405 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria SD28_RS05405 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal SD28_RS05405 IPR012947 Threonyl/alanyl tRNA synthetase, SAD SD28_RS05405 IPR009000 Translation protein, beta-barrel domain superfamily SD28_RS05405 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily SD28_RS05405 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain SD28_RS05405 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily SD28_RS05405 IPR002318 Alanine-tRNA ligase, class IIc SD28_RS05425 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase SD28_RS05425 IPR017953 Carbohydrate kinase, predicted, conserved site SD28_RS05425 IPR036652 YjeF N-terminal domain superfamily SD28_RS05425 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr SD28_RS05425 IPR004443 YjeF N-terminal domain SD28_RS05425 IPR029056 Ribokinase-like SD28_RS05430 IPR029760 Glutathione peroxidase conserved site SD28_RS05430 IPR036249 Thioredoxin-like superfamily SD28_RS05430 IPR029759 Glutathione peroxidase active site SD28_RS05430 IPR000889 Glutathione peroxidase SD28_RS05435 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase SD28_RS05435 IPR002912 ACT domain SD28_RS05435 IPR036979 Chorismate mutase domain superfamily SD28_RS05435 IPR002701 Chorismate mutase II, prokaryotic-type SD28_RS05435 IPR018528 Prephenate dehydratase, conserved site SD28_RS05435 IPR001086 Prephenate dehydratase SD28_RS05435 IPR036263 Chorismate mutase type II superfamily SD28_RS05435 IPR010952 Chorismate mutase, gammaproteobacteria SD28_RS05445 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SD28_RS05445 IPR004498 Ribosomal protein L11 methyltransferase SD28_RS05455 IPR001015 Ferrochelatase SD28_RS05455 IPR019772 Ferrochelatase, active site SD28_RS05455 IPR033644 Ferrochelatase, C-terminal SD28_RS05455 IPR033659 Ferrochelatase, N-terminal SD28_RS05460 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SD28_RS05460 IPR006050 DNA photolyase, N-terminal SD28_RS05460 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal SD28_RS05460 IPR002081 Cryptochrome/DNA photolyase class 1 SD28_RS05460 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain SD28_RS05460 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily SD28_RS05460 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily SD28_RS05465 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal SD28_RS05465 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC SD28_RS05465 IPR035929 CoaB-like superfamily SD28_RS05465 IPR003382 Flavoprotein SD28_RS05465 IPR036551 Flavin prenyltransferase-like SD28_RS05470 IPR011701 Major facilitator superfamily SD28_RS05470 IPR020846 Major facilitator superfamily domain SD28_RS05470 IPR036259 MFS transporter superfamily SD28_RS05470 IPR005829 Sugar transporter, conserved site SD28_RS05475 IPR002293 Amino acid/polyamine transporter I SD28_RS05480 IPR010985 Ribbon-helix-helix SD28_RS05480 IPR029510 Aldehyde dehydrogenase, glutamic acid active site SD28_RS05480 IPR016162 Aldehyde dehydrogenase, N-terminal SD28_RS05480 IPR016160 Aldehyde dehydrogenase, cysteine active site SD28_RS05480 IPR016163 Aldehyde dehydrogenase, C-terminal SD28_RS05480 IPR013321 Arc-type ribbon-helix-helix SD28_RS05480 IPR002872 Proline dehydrogenase domain SD28_RS05480 IPR016161 Aldehyde/histidinol dehydrogenase SD28_RS05480 IPR024082 Proline dehydrogenase PutA, domain II SD28_RS05480 IPR025703 Bifunctional protein PutA SD28_RS05480 IPR029041 FAD-linked oxidoreductase-like SD28_RS05480 IPR024089 Proline dehydrogenase PutA, domain I/II SD28_RS05480 IPR015590 Aldehyde dehydrogenase domain SD28_RS05480 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 SD28_RS05480 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain SD28_RS05480 IPR024090 Proline dehydrogenase PutA, domain I SD28_RS05485 IPR036714 Flavinator of succinate dehydrogenase superfamily SD28_RS05485 IPR005631 Flavinator of succinate dehydrogenase SD28_RS05495 IPR030960 3-dehydroquinate synthase domain SD28_RS05495 IPR016037 3-dehydroquinate synthase AroB SD28_RS05495 IPR030963 3-dehydroquinate synthase family SD28_RS05500 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS05500 IPR000623 Shikimate kinase/Threonine synthase-like 1 SD28_RS05500 IPR023000 Shikimate kinase, conserved site SD28_RS05500 IPR031322 Shikimate kinase/gluconokinase SD28_RS05505 IPR001775 GspD/PilQ family SD28_RS05505 IPR021731 AMIN domain SD28_RS05505 IPR005644 NolW-like SD28_RS05505 IPR038591 NolW-like superfamily SD28_RS05505 IPR004845 Type II secretion system GspD, conserved site SD28_RS05505 IPR013355 Type IV pilus secretin PilQ SD28_RS05505 IPR004846 Type II/III secretion system SD28_RS05505 IPR011662 Secretin/TonB, short N-terminal domain SD28_RS05530 IPR007862 Adenylate kinase, active site lid domain SD28_RS05530 IPR006259 Adenylate kinase subfamily SD28_RS05530 IPR000850 Adenylate kinase/UMP-CMP kinase SD28_RS05530 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS05535 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 SD28_RS05535 IPR006094 FAD linked oxidase, N-terminal SD28_RS05535 IPR004490 Glycolate oxidase subunit GlcD SD28_RS05535 IPR004113 FAD-linked oxidase, C-terminal SD28_RS05535 IPR036318 FAD-binding, type PCMH-like superfamily SD28_RS05535 IPR016166 FAD-binding domain, PCMH-type SD28_RS05535 IPR016164 FAD-linked oxidase-like, C-terminal SD28_RS05550 IPR005225 Small GTP-binding protein domain SD28_RS05550 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS05550 IPR030388 Era-type guanine nucleotide-binding (G) domain SD28_RS05550 IPR009019 K homology domain superfamily, prokaryotic type SD28_RS05550 IPR004044 K Homology domain, type 2 SD28_RS05550 IPR005662 GTP-binding protein Era SD28_RS05550 IPR015946 K homology domain-like, alpha/beta SD28_RS05550 IPR006073 GTP binding domain SD28_RS05555 IPR015424 Pyridoxal phosphate-dependent transferase SD28_RS05555 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 SD28_RS05555 IPR004839 Aminotransferase, class I/classII SD28_RS05555 IPR015421 Pyridoxal phosphate-dependent transferase, major domain SD28_RS05555 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site SD28_RS05560 IPR000905 Gcp-like domain SD28_RS05560 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB SD28_RS05565 IPR032466 Metal-dependent hydrolase SD28_RS05565 IPR003764 N-acetylglucosamine-6-phosphate deacetylase SD28_RS05565 IPR006680 Amidohydrolase-related SD28_RS05565 IPR011059 Metal-dependent hydrolase, composite domain superfamily SD28_RS05570 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily SD28_RS05570 IPR019991 GTP-binding protein, ribosome biogenesis SD28_RS05570 IPR006073 GTP binding domain SD28_RS05570 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS05570 IPR016478 GTPase, MTG1 SD28_RS05570 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain SD28_RS05580 IPR001267 Thymidine kinase SD28_RS05580 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS05590 IPR002935 Class I-like SAM-dependent O-methyltransferase SD28_RS05590 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SD28_RS05595 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB SD28_RS05595 IPR002792 TRAM domain SD28_RS05595 IPR020612 Methylthiotransferase, conserved site SD28_RS05595 IPR005839 Methylthiotransferase SD28_RS05595 IPR038135 Methylthiotransferase, N-terminal domain superfamily SD28_RS05595 IPR007197 Radical SAM SD28_RS05595 IPR006638 Elp3/MiaB/NifB SD28_RS05595 IPR023404 Radical SAM, alpha/beta horseshoe SD28_RS05595 IPR013848 Methylthiotransferase, N-terminal SD28_RS05600 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS05600 IPR003714 PhoH-like protein SD28_RS05605 IPR023091 Metalloprotease catalytic domain superfamily, predicted SD28_RS05605 IPR002036 Endoribonuclease YbeY SD28_RS05605 IPR020549 Endoribonuclease YbeY, conserved site SD28_RS05610 IPR005170 Transporter-associated domain SD28_RS05610 IPR016169 FAD-binding, type PCMH, subdomain 2 SD28_RS05610 IPR000644 CBS domain SD28_RS05610 IPR036318 FAD-binding, type PCMH-like superfamily SD28_RS05615 IPR036526 Carbon-nitrogen hydrolase superfamily SD28_RS05615 IPR003010 Carbon-nitrogen hydrolase SD28_RS05615 IPR004563 Apolipoprotein N-acyltransferase SD28_RS05630 IPR023214 HAD superfamily SD28_RS05630 IPR000150 Cof family SD28_RS05630 IPR036412 HAD-like superfamily SD28_RS05630 IPR006379 HAD-superfamily hydrolase, subfamily IIB SD28_RS05640 IPR042118 QueA, domain 1 SD28_RS05640 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA SD28_RS05640 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily SD28_RS05640 IPR042119 QueA, domain 2 SD28_RS05645 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 SD28_RS05645 IPR002938 FAD-binding domain SD28_RS05645 IPR036188 FAD/NAD(P)-binding domain superfamily SD28_RS05645 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site SD28_RS05650 IPR036188 FAD/NAD(P)-binding domain superfamily SD28_RS05650 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 SD28_RS05650 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site SD28_RS05650 IPR002938 FAD-binding domain SD28_RS05655 IPR036255 YgfB-like superfamily SD28_RS05655 IPR011978 Uncharacterised protein family UPF0149 SD28_RS05675 IPR000994 Peptidase M24 SD28_RS05675 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal SD28_RS05675 IPR036005 Creatinase/aminopeptidase-like SD28_RS05675 IPR000587 Creatinase, N-terminal SD28_RS05675 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site SD28_RS05680 IPR003730 Multi-copper polyphenol oxidoreductase SD28_RS05680 IPR038371 Multi-copper polyphenol oxidoreductase superfamily SD28_RS05680 IPR011324 Cytotoxic necrotizing factor-like, catalytic SD28_RS05685 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial SD28_RS05685 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type SD28_RS05685 IPR011005 Dihydropteroate synthase-like SD28_RS05690 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SD28_RS05690 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily SD28_RS05700 IPR009057 Homeobox-like domain superfamily SD28_RS05700 IPR001584 Integrase, catalytic core SD28_RS05700 IPR036397 Ribonuclease H superfamily SD28_RS05700 IPR012337 Ribonuclease H-like superfamily SD28_RS05700 IPR001598 Transposase, IS30, conserved site SD28_RS05710 IPR020846 Major facilitator superfamily domain SD28_RS05710 IPR005828 Major facilitator, sugar transporter-like SD28_RS05710 IPR036259 MFS transporter superfamily SD28_RS05710 IPR003663 Sugar/inositol transporter SD28_RS05710 IPR005829 Sugar transporter, conserved site SD28_RS05715 IPR001347 Sugar isomerase (SIS) SD28_RS05715 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising SD28_RS05715 IPR035490 GlmS/FrlB, SIS domain 2 SD28_RS05715 IPR035466 GlmS/AgaS, SIS domain 1 SD28_RS05715 IPR029055 Nucleophile aminohydrolases, N-terminal SD28_RS05715 IPR017932 Glutamine amidotransferase type 2 domain SD28_RS05720 IPR001991 Sodium:dicarboxylate symporter SD28_RS05720 IPR036458 Sodium:dicarboxylate symporter superfamily SD28_RS05725 IPR023401 Ornithine cyclodeaminase, N-terminal SD28_RS05725 IPR003462 Ornithine cyclodeaminase/mu-crystallin SD28_RS05725 IPR036291 NAD(P)-binding domain superfamily SD28_RS05730 IPR016169 FAD-binding, type PCMH, subdomain 2 SD28_RS05730 IPR002550 CNNM, transmembrane domain SD28_RS05730 IPR000644 CBS domain SD28_RS05730 IPR005170 Transporter-associated domain SD28_RS05730 IPR036318 FAD-binding, type PCMH-like superfamily SD28_RS05735 IPR020055 Ribosomal protein L25, short-form SD28_RS05735 IPR001021 Ribosomal protein L25, long-form SD28_RS05735 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal SD28_RS05735 IPR029751 Ribosomal protein L25 SD28_RS05735 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily SD28_RS05740 IPR000836 Phosphoribosyltransferase domain SD28_RS05740 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site SD28_RS05740 IPR029057 Phosphoribosyltransferase-like SD28_RS05740 IPR005946 Ribose-phosphate pyrophosphokinase SD28_RS05740 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type SD28_RS05740 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain SD28_RS05760 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F SD28_RS05760 IPR036986 RNA-binding S4 domain superfamily SD28_RS05760 IPR002942 RNA-binding S4 domain SD28_RS05760 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site SD28_RS05760 IPR006145 Pseudouridine synthase, RsuA/RluA SD28_RS05760 IPR020103 Pseudouridine synthase, catalytic domain superfamily SD28_RS05770 IPR013785 Aldolase-type TIM barrel SD28_RS05770 IPR006638 Elp3/MiaB/NifB SD28_RS05770 IPR040072 Methyltransferase (Class A) SD28_RS05770 IPR027492 Dual-specificity RNA methyltransferase RlmN SD28_RS05770 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr SD28_RS05770 IPR007197 Radical SAM SD28_RS05775 IPR003593 AAA+ ATPase domain SD28_RS05775 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal SD28_RS05775 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily SD28_RS05775 IPR007692 DNA helicase, DnaB type SD28_RS05775 IPR007694 DNA helicase, DnaB-like, C-terminal SD28_RS05775 IPR007693 DNA helicase, DnaB-like, N-terminal SD28_RS05775 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS05780 IPR036791 Ribosomal protein L9, C-terminal domain superfamily SD28_RS05780 IPR020069 Ribosomal protein L9, C-terminal SD28_RS05780 IPR020594 Ribosomal protein L9, bacteria/chloroplast SD28_RS05780 IPR009027 Ribosomal protein L9/RNase H1, N-terminal SD28_RS05780 IPR000244 Ribosomal protein L9 SD28_RS05780 IPR020070 Ribosomal protein L9, N-terminal SD28_RS05780 IPR036935 Ribosomal protein L9, N-terminal domain superfamily SD28_RS05785 IPR001648 Ribosomal protein S18 SD28_RS05785 IPR018275 Ribosomal protein S18, conserved site SD28_RS05785 IPR036870 Ribosomal protein S18 superfamily SD28_RS05790 IPR020814 Ribosomal protein S6, plastid/chloroplast SD28_RS05790 IPR000529 Ribosomal protein S6 SD28_RS05790 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 SD28_RS05790 IPR035980 Ribosomal protein S6 superfamily SD28_RS05795 IPR001260 Coproporphyrinogen III oxidase, aerobic SD28_RS05795 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily SD28_RS05805 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site SD28_RS05805 IPR015424 Pyridoxal phosphate-dependent transferase SD28_RS05805 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 SD28_RS05805 IPR015421 Pyridoxal phosphate-dependent transferase, major domain SD28_RS05805 IPR000192 Aminotransferase class V domain SD28_RS05805 IPR022278 Phosphoserine aminotransferase SD28_RS05810 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS05810 IPR011994 Cytidylate kinase domain SD28_RS05810 IPR003136 Cytidylate kinase SD28_RS05820 IPR013766 Thioredoxin domain SD28_RS05820 IPR036249 Thioredoxin-like superfamily SD28_RS05820 IPR013740 Redoxin SD28_RS05820 IPR037944 Peroxiredoxin-5-like SD28_RS05825 IPR000847 Transcription regulator HTH, LysR SD28_RS05825 IPR005119 LysR, substrate-binding SD28_RS05825 IPR036390 Winged helix DNA-binding domain superfamily SD28_RS05825 IPR036388 Winged helix-like DNA-binding domain superfamily SD28_RS05830 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C SD28_RS05830 IPR012338 Beta-lactamase/transpeptidase-like SD28_RS05845 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SD28_RS05845 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type SD28_RS05845 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase SD28_RS05845 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal SD28_RS05860 IPR036397 Ribonuclease H superfamily SD28_RS05860 IPR012337 Ribonuclease H-like superfamily SD28_RS05860 IPR001584 Integrase, catalytic core SD28_RS05860 IPR009057 Homeobox-like domain superfamily SD28_RS05860 IPR001598 Transposase, IS30, conserved site SD28_RS05885 IPR003593 AAA+ ATPase domain SD28_RS05885 IPR011527 ABC transporter type 1, transmembrane domain SD28_RS05885 IPR036640 ABC transporter type 1, transmembrane domain superfamily SD28_RS05885 IPR003439 ABC transporter-like SD28_RS05885 IPR017871 ABC transporter, conserved site SD28_RS05885 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD SD28_RS05885 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS05885 IPR039421 Type I protein exporter SD28_RS05890 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS05890 IPR011527 ABC transporter type 1, transmembrane domain SD28_RS05890 IPR036640 ABC transporter type 1, transmembrane domain superfamily SD28_RS05890 IPR003439 ABC transporter-like SD28_RS05890 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC SD28_RS05890 IPR003593 AAA+ ATPase domain SD28_RS05890 IPR017871 ABC transporter, conserved site SD28_RS05895 IPR001991 Sodium:dicarboxylate symporter SD28_RS05895 IPR018107 Sodium:dicarboxylate symporter, conserved site SD28_RS05895 IPR036458 Sodium:dicarboxylate symporter superfamily SD28_RS05895 IPR023954 C4-dicarboxylate transport protein SD28_RS05900 IPR019897 RidA, conserved site SD28_RS05900 IPR006056 RidA family SD28_RS05900 IPR035959 RutC-like superfamily SD28_RS05900 IPR006175 YjgF/YER057c/UK114 family SD28_RS05905 IPR000849 Sugar phosphate transporter SD28_RS05905 IPR036259 MFS transporter superfamily SD28_RS05905 IPR020846 Major facilitator superfamily domain SD28_RS05905 IPR011701 Major facilitator superfamily SD28_RS05905 IPR005267 Glycerol-3-phosphate transporter SD28_RS05905 IPR021159 Glycerate/sugar phosphate transporter, conserved site SD28_RS05915 IPR037205 ChaB superfamily SD28_RS05915 IPR009317 ChaB SD28_RS05920 IPR002347 Short-chain dehydrogenase/reductase SDR SD28_RS05920 IPR020904 Short-chain dehydrogenase/reductase, conserved site SD28_RS05920 IPR036291 NAD(P)-binding domain superfamily SD28_RS05930 IPR023023 dNTP triphosphohydrolase, type 2 SD28_RS05930 IPR003607 HD/PDEase domain SD28_RS05930 IPR006674 HD domain SD28_RS05930 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily SD28_RS05930 IPR006261 dNTP triphosphohydrolase SD28_RS05930 IPR026875 Phosphohydrolase-associated domain SD28_RS05935 IPR036259 MFS transporter superfamily SD28_RS05935 IPR004736 MFS transporter, metabolite:H symporter SD28_RS05935 IPR005829 Sugar transporter, conserved site SD28_RS05935 IPR020846 Major facilitator superfamily domain SD28_RS05935 IPR011701 Major facilitator superfamily SD28_RS05945 IPR003610 Carbohydrate-binding module family 5/12 SD28_RS05945 IPR013783 Immunoglobulin-like fold SD28_RS05945 IPR036573 Carbohydrate-binding module superfamily 5/12 SD28_RS05945 IPR001223 Glycoside hydrolase family 18, catalytic domain SD28_RS05945 IPR009470 Chitinase, C-terminal SD28_RS05945 IPR017853 Glycoside hydrolase superfamily SD28_RS05945 IPR011583 Chitinase II SD28_RS05945 IPR029070 Chitinase insertion domain superfamily SD28_RS05955 IPR000836 Phosphoribosyltransferase domain SD28_RS05955 IPR005765 Uracil phosphoribosyl transferase SD28_RS05955 IPR034332 Uracil phosphoribosyltransferase, bacterial-type SD28_RS05955 IPR029057 Phosphoribosyltransferase-like SD28_RS05960 IPR005338 Anhydro-N-acetylmuramic acid kinase SD28_RS05965 IPR017871 ABC transporter, conserved site SD28_RS05965 IPR003593 AAA+ ATPase domain SD28_RS05965 IPR003439 ABC transporter-like SD28_RS05965 IPR032781 ABC-transporter extension domain SD28_RS05965 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily SD28_RS05965 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS05965 IPR032524 ABC transporter Uup, C-terminal SD28_RS05970 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG SD28_RS05970 IPR020846 Major facilitator superfamily domain SD28_RS05970 IPR036259 MFS transporter superfamily SD28_RS05970 IPR011701 Major facilitator superfamily SD28_RS05970 IPR005829 Sugar transporter, conserved site SD28_RS05980 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB SD28_RS05980 IPR029028 Alpha/beta knot methyltransferases SD28_RS05980 IPR029064 50S ribosomal protein L30e-like SD28_RS05980 IPR004441 RNA methyltransferase TrmH family SD28_RS05980 IPR001537 tRNA/rRNA methyltransferase, SpoU type SD28_RS05980 IPR013123 RNA 2-O ribose methyltransferase, substrate binding SD28_RS05980 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SD28_RS05985 IPR000713 Mur ligase, N-terminal catalytic domain SD28_RS05985 IPR005757 Murein peptide ligase SD28_RS05985 IPR004101 Mur ligase, C-terminal SD28_RS05985 IPR036615 Mur ligase, C-terminal domain superfamily SD28_RS05985 IPR013221 Mur ligase, central SD28_RS05985 IPR036565 Mur-like, catalytic domain superfamily SD28_RS05995 IPR029057 Phosphoribosyltransferase-like SD28_RS05995 IPR000836 Phosphoribosyltransferase domain SD28_RS05995 IPR004467 Orotate phosphoribosyl transferase domain SD28_RS05995 IPR023031 Orotate phosphoribosyltransferase SD28_RS06000 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type SD28_RS06000 IPR010138 UDP-2,3-diacylglucosamine hydrolase SD28_RS06005 IPR004101 Mur ligase, C-terminal SD28_RS06005 IPR036615 Mur ligase, C-terminal domain superfamily SD28_RS06005 IPR013221 Mur ligase, central SD28_RS06005 IPR000713 Mur ligase, N-terminal catalytic domain SD28_RS06005 IPR036565 Mur-like, catalytic domain superfamily SD28_RS06005 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase SD28_RS06005 IPR035911 MurE/MurF, N-terminal SD28_RS06015 IPR000924 Glutamyl/glutaminyl-tRNA synthetase SD28_RS06015 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site SD28_RS06015 IPR004514 Glutamine-tRNA synthetase SD28_RS06015 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SD28_RS06015 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily SD28_RS06015 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily SD28_RS06015 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain SD28_RS06015 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain SD28_RS06015 IPR022861 Glutamine-tRNA ligase, bacterial SD28_RS06015 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal SD28_RS06020 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site SD28_RS06020 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal SD28_RS06020 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal SD28_RS06020 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising SD28_RS06025 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain SD28_RS06025 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 SD28_RS06025 IPR000794 Beta-ketoacyl synthase SD28_RS06025 IPR016039 Thiolase-like SD28_RS06025 IPR014030 Beta-ketoacyl synthase, N-terminal SD28_RS06025 IPR014031 Beta-ketoacyl synthase, C-terminal SD28_RS06025 IPR018201 Beta-ketoacyl synthase, active site SD28_RS06030 IPR036736 ACP-like superfamily SD28_RS06030 IPR003231 Acyl carrier protein (ACP) SD28_RS06030 IPR009081 Phosphopantetheine binding ACP domain SD28_RS06030 IPR006162 Phosphopantetheine attachment site SD28_RS06035 IPR036291 NAD(P)-binding domain superfamily SD28_RS06035 IPR020904 Short-chain dehydrogenase/reductase, conserved site SD28_RS06035 IPR002347 Short-chain dehydrogenase/reductase SDR SD28_RS06035 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase SD28_RS06040 IPR001227 Acyl transferase domain superfamily SD28_RS06040 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding SD28_RS06040 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type SD28_RS06040 IPR024925 Malonyl CoA-acyl carrier protein transacylase SD28_RS06040 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase SD28_RS06040 IPR014043 Acyl transferase SD28_RS06045 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 SD28_RS06045 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal SD28_RS06045 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SD28_RS06045 IPR016039 Thiolase-like SD28_RS06050 IPR012281 Phospholipid biosynthesis protein, PlsX-like SD28_RS06050 IPR003664 Fatty acid synthesis PlsX protein SD28_RS06055 IPR002677 Ribosomal protein L32p SD28_RS06055 IPR011332 Zinc-binding ribosomal protein SD28_RS06065 IPR005474 Transketolase, N-terminal SD28_RS06065 IPR033247 Transketolase family SD28_RS06065 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II SD28_RS06065 IPR020826 Transketolase binding site SD28_RS06065 IPR005478 Transketolase, bacterial-like SD28_RS06065 IPR005475 Transketolase-like, pyrimidine-binding domain SD28_RS06065 IPR029061 Thiamin diphosphate-binding fold SD28_RS06065 IPR033248 Transketolase, C-terminal domain SD28_RS06070 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I SD28_RS06070 IPR036291 NAD(P)-binding domain superfamily SD28_RS06070 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain SD28_RS06070 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain SD28_RS06070 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site SD28_RS06070 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family SD28_RS06075 IPR036043 Phosphoglycerate kinase superfamily SD28_RS06075 IPR015824 Phosphoglycerate kinase, N-terminal SD28_RS06075 IPR015911 Phosphoglycerate kinase, conserved site SD28_RS06075 IPR001576 Phosphoglycerate kinase SD28_RS06080 IPR036918 Pyruvate kinase, C-terminal domain superfamily SD28_RS06080 IPR015795 Pyruvate kinase, C-terminal SD28_RS06080 IPR015793 Pyruvate kinase, barrel SD28_RS06080 IPR018209 Pyruvate kinase, active site SD28_RS06080 IPR011037 Pyruvate kinase-like, insert domain superfamily SD28_RS06080 IPR040442 Pyruvate kinase-like domain superfamily SD28_RS06080 IPR001697 Pyruvate kinase SD28_RS06080 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily SD28_RS06080 IPR015806 Pyruvate kinase, insert domain superfamily SD28_RS06085 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype SD28_RS06085 IPR000771 Fructose-bisphosphate aldolase, class-II SD28_RS06085 IPR013785 Aldolase-type TIM barrel SD28_RS06095 IPR012337 Ribonuclease H-like superfamily SD28_RS06095 IPR001598 Transposase, IS30, conserved site SD28_RS06095 IPR001584 Integrase, catalytic core SD28_RS06095 IPR009057 Homeobox-like domain superfamily SD28_RS06095 IPR036397 Ribonuclease H superfamily SD28_RS06105 IPR003439 ABC transporter-like SD28_RS06105 IPR003593 AAA+ ATPase domain SD28_RS06105 IPR013611 Transport-associated OB, type 2 SD28_RS06105 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS06105 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit SD28_RS06105 IPR008995 Molybdate/tungstate binding, C-terminal SD28_RS06105 IPR017871 ABC transporter, conserved site SD28_RS06110 IPR000515 ABC transporter type 1, transmembrane domain MetI-like SD28_RS06110 IPR035906 MetI-like superfamily SD28_RS06115 IPR000515 ABC transporter type 1, transmembrane domain MetI-like SD28_RS06115 IPR035906 MetI-like superfamily SD28_RS06130 IPR018261 Ribosomal protein L27, conserved site SD28_RS06130 IPR001684 Ribosomal protein L27 SD28_RS06135 IPR018258 Ribosomal protein L21, conserved site SD28_RS06135 IPR001787 Ribosomal protein L21 SD28_RS06135 IPR028909 Ribosomal protein L21-like SD28_RS06135 IPR036164 L21-like superfamily SD28_RS06140 IPR036266 SecA, Wing/Scaffold superfamily SD28_RS06140 IPR011116 SecA Wing/Scaffold SD28_RS06140 IPR036670 SecA, preprotein cross-linking domain superfamily SD28_RS06140 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS06140 IPR004027 SEC-C motif SD28_RS06140 IPR000185 Protein translocase subunit SecA SD28_RS06140 IPR020937 SecA conserved site SD28_RS06140 IPR011115 SecA DEAD-like, N-terminal SD28_RS06140 IPR014018 SecA motor DEAD SD28_RS06140 IPR011130 SecA, preprotein cross-linking domain SD28_RS06150 IPR000845 Nucleoside phosphorylase domain SD28_RS06150 IPR035994 Nucleoside phosphorylase superfamily SD28_RS06150 IPR004402 Purine nucleoside phosphorylase DeoD-type SD28_RS06150 IPR018016 Nucleoside phosphorylase, conserved site SD28_RS06160 IPR041569 AAA ATPase, AAA+ lid domain SD28_RS06160 IPR000642 Peptidase M41 SD28_RS06160 IPR037219 Peptidase M41-like SD28_RS06160 IPR003593 AAA+ ATPase domain SD28_RS06160 IPR003959 ATPase, AAA-type, core SD28_RS06160 IPR003960 ATPase, AAA-type, conserved site SD28_RS06160 IPR005936 Peptidase, FtsH SD28_RS06160 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS06160 IPR011546 Peptidase M41, FtsH extracellular SD28_RS06165 IPR003439 ABC transporter-like SD28_RS06165 IPR017871 ABC transporter, conserved site SD28_RS06165 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS06165 IPR004602 UvrABC system subunit A SD28_RS06165 IPR041552 UvrA DNA-binding domain SD28_RS06165 IPR041102 UvrA, interaction domain SD28_RS06170 IPR023459 Transcription elongation factor GreA/GreB family SD28_RS06170 IPR028624 Transcription elongation factor GreA/GreB SD28_RS06170 IPR006359 Transcription elongation factor GreA SD28_RS06170 IPR018151 Transcription elongation factor, GreA/GreB, conserved site SD28_RS06170 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily SD28_RS06170 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily SD28_RS06170 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal SD28_RS06170 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal SD28_RS06180 IPR035476 Phosphoglucose isomerase, SIS domain 1 SD28_RS06180 IPR035482 Phosphoglucose isomerase, SIS domain 2 SD28_RS06180 IPR001672 Phosphoglucose isomerase (PGI) SD28_RS06180 IPR018189 Phosphoglucose isomerase, conserved site SD28_RS06180 IPR023096 Phosphoglucose isomerase, C-terminal SD28_RS06190 IPR001093 IMP dehydrogenase/GMP reductase SD28_RS06190 IPR015875 IMP dehydrogenase / GMP reductase, conserved site SD28_RS06190 IPR005990 Inosine-5'-monophosphate dehydrogenase SD28_RS06190 IPR000644 CBS domain SD28_RS06190 IPR013785 Aldolase-type TIM barrel SD28_RS06195 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal SD28_RS06195 IPR023042 Peptidase M17, leucine aminopeptidase SD28_RS06195 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal SD28_RS06195 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B SD28_RS06200 IPR030922 LPS export ABC transporter permease LptF SD28_RS06200 IPR005495 Permease LptG/LptF-related SD28_RS06205 IPR005495 Permease LptG/LptF-related SD28_RS06205 IPR030923 LPS export ABC transporter permease LptG SD28_RS06210 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like SD28_RS06210 IPR007863 Peptidase M16, C-terminal SD28_RS06210 IPR001431 Peptidase M16, zinc-binding site SD28_RS06210 IPR011765 Peptidase M16, N-terminal SD28_RS06220 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SD28_RS06220 IPR002052 DNA methylase, N-6 adenine-specific, conserved site SD28_RS06220 IPR004398 RNA methyltransferase, RsmD SD28_RS06225 IPR005115 Uncharacterised domain UPF0126 SD28_RS06230 IPR012347 Ferritin-like SD28_RS06230 IPR009078 Ferritin-like superfamily SD28_RS06230 IPR010386 tRNA-hydroxylase MiaE SD28_RS06235 IPR018016 Nucleoside phosphorylase, conserved site SD28_RS06235 IPR000845 Nucleoside phosphorylase domain SD28_RS06235 IPR010058 Uridine phosphorylase SD28_RS06235 IPR035994 Nucleoside phosphorylase superfamily SD28_RS06240 IPR016192 APOBEC/CMP deaminase, zinc-binding SD28_RS06240 IPR016193 Cytidine deaminase-like SD28_RS06240 IPR006262 Cytidine deaminase, homotetrameric SD28_RS06240 IPR002125 Cytidine and deoxycytidylate deaminase domain SD28_RS06245 IPR002059 Cold-shock protein, DNA-binding SD28_RS06245 IPR019844 Cold-shock (CSD) domain SD28_RS06245 IPR012156 Cold shock, CspA SD28_RS06245 IPR012340 Nucleic acid-binding, OB-fold SD28_RS06245 IPR011129 Cold shock domain SD28_RS06255 IPR009051 Alpha-helical ferredoxin SD28_RS06255 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SD28_RS06255 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SD28_RS06255 IPR016166 FAD-binding domain, PCMH-type SD28_RS06255 IPR004113 FAD-linked oxidase, C-terminal SD28_RS06255 IPR016164 FAD-linked oxidase-like, C-terminal SD28_RS06255 IPR036318 FAD-binding, type PCMH-like superfamily SD28_RS06255 IPR006094 FAD linked oxidase, N-terminal SD28_RS06260 IPR011258 BPG-independent PGAM, N-terminal SD28_RS06260 IPR017850 Alkaline-phosphatase-like, core domain superfamily SD28_RS06260 IPR006124 Metalloenzyme SD28_RS06260 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily SD28_RS06260 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent SD28_RS06265 IPR006195 Aminoacyl-tRNA synthetase, class II SD28_RS06265 IPR002317 Serine-tRNA ligase, type1 SD28_RS06265 IPR015866 Serine-tRNA synthetase, type1, N-terminal SD28_RS06265 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily SD28_RS06265 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) SD28_RS06265 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm SD28_RS06265 IPR033729 Serine-tRNA ligase catalytic core domain SD28_RS06270 IPR004604 DNA recombination/repair protein RecN SD28_RS06270 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS06270 IPR003395 RecF/RecN/SMC, N-terminal SD28_RS06280 IPR004839 Aminotransferase, class I/classII SD28_RS06280 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site SD28_RS06280 IPR015424 Pyridoxal phosphate-dependent transferase SD28_RS06280 IPR015421 Pyridoxal phosphate-dependent transferase, major domain SD28_RS06280 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 SD28_RS06285 IPR000600 ROK family SD28_RS06290 IPR003846 Protein adenylyltransferase SelO SD28_RS06300 IPR011034 Formyl transferase-like, C-terminal domain superfamily SD28_RS06300 IPR003180 Methylpurine-DNA glycosylase SD28_RS06300 IPR036995 Methylpurine-DNA glycosylase superfamily SD28_RS06305 IPR018527 Rubredoxin, iron-binding site SD28_RS06305 IPR024935 Rubredoxin domain SD28_RS06305 IPR024934 Rubredoxin-like domain SD28_RS06305 IPR024922 Rubredoxin SD28_RS06310 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase SD28_RS06310 IPR005966 D-cysteine desulfhydrase SD28_RS06310 IPR001926 Pyridoxal-phosphate dependent enzyme SD28_RS06310 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme SD28_RS06315 IPR029132 Choloylglycine hydrolase/NAAA C-terminal SD28_RS06315 IPR029055 Nucleophile aminohydrolases, N-terminal SD28_RS06320 IPR022962 Soluble pyridine nucleotide transhydrogenase SD28_RS06320 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SD28_RS06320 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I SD28_RS06320 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily SD28_RS06320 IPR036188 FAD/NAD(P)-binding domain superfamily SD28_RS06320 IPR023753 FAD/NAD(P)-binding domain SD28_RS06325 IPR000045 Prepilin type IV endopeptidase, peptidase domain SD28_RS06325 IPR010627 Peptidase A24A, N-terminal SD28_RS06325 IPR014032 Peptidase A24A, prepilin type IV, bacterial SD28_RS06335 IPR023650 Beta-lactamase, class-A active site SD28_RS06335 IPR000871 Beta-lactamase, class-A SD28_RS06335 IPR012338 Beta-lactamase/transpeptidase-like SD28_RS06340 IPR036416 Peptidyl-tRNA hydrolase superfamily SD28_RS06340 IPR018171 Peptidyl-tRNA hydrolase, conserved site SD28_RS06340 IPR001328 Peptidyl-tRNA hydrolase SD28_RS06345 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 SD28_RS06345 IPR031167 OBG-type guanine nucleotide-binding (G) domain SD28_RS06345 IPR006073 GTP binding domain SD28_RS06345 IPR012676 TGS-like SD28_RS06345 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS06345 IPR041706 YchF, N-terminal SD28_RS06345 IPR023192 TGS-like domain superfamily SD28_RS06345 IPR013029 YchF, C-terminal domain SD28_RS06345 IPR012675 Beta-grasp domain superfamily SD28_RS06345 IPR004095 TGS SD28_RS06350 IPR036565 Mur-like, catalytic domain superfamily SD28_RS06350 IPR035911 MurE/MurF, N-terminal SD28_RS06350 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase SD28_RS06350 IPR013221 Mur ligase, central SD28_RS06350 IPR036615 Mur ligase, C-terminal domain superfamily SD28_RS06350 IPR004101 Mur ligase, C-terminal SD28_RS06350 IPR000713 Mur ligase, N-terminal catalytic domain SD28_RS06355 IPR006194 Glycine-tRNA synthetase, heterodimeric SD28_RS06355 IPR002310 Glycine-tRNA ligase, alpha subunit SD28_RS06360 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 SD28_RS06360 IPR015421 Pyridoxal phosphate-dependent transferase, major domain SD28_RS06360 IPR020581 Glycine cleavage system P protein SD28_RS06360 IPR015424 Pyridoxal phosphate-dependent transferase SD28_RS06360 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 SD28_RS06365 IPR015421 Pyridoxal phosphate-dependent transferase, major domain SD28_RS06365 IPR020581 Glycine cleavage system P protein SD28_RS06365 IPR015424 Pyridoxal phosphate-dependent transferase SD28_RS06365 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 SD28_RS06365 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 SD28_RS06370 IPR011053 Single hybrid motif SD28_RS06370 IPR002930 Glycine cleavage system H-protein SD28_RS06370 IPR000089 Biotin/lipoyl attachment SD28_RS06370 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site SD28_RS06370 IPR033753 Glycine cleavage system H-protein/Simiate SD28_RS06370 IPR017453 Glycine cleavage system H-protein, subgroup SD28_RS06375 IPR022903 Glycine cleavage system T protein, bacteria SD28_RS06375 IPR006223 Glycine cleavage system T protein SD28_RS06375 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain SD28_RS06375 IPR006222 Aminomethyltransferase, folate-binding domain SD28_RS06375 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal SD28_RS06375 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 SD28_RS06375 IPR028896 Aminomethyltransferase-like SD28_RS06380 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily SD28_RS06380 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal SD28_RS06380 IPR000310 Orn/Lys/Arg decarboxylase, major domain SD28_RS06380 IPR011193 Ornithine/lysine/arginine decarboxylase SD28_RS06380 IPR015424 Pyridoxal phosphate-dependent transferase SD28_RS06380 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal SD28_RS06380 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 SD28_RS06380 IPR015421 Pyridoxal phosphate-dependent transferase, major domain SD28_RS06390 IPR003593 AAA+ ATPase domain SD28_RS06390 IPR003439 ABC transporter-like SD28_RS06390 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS06390 IPR011924 Lipoprotein releasing system, ATP-binding protein SD28_RS06390 IPR015854 ABC transporter, lipoprotein release, LolD SD28_RS06390 IPR017871 ABC transporter, conserved site SD28_RS06395 IPR003838 ABC transporter permease protein domain SD28_RS06395 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E SD28_RS06395 IPR025857 MacB-like periplasmic core domain SD28_RS06420 IPR016195 Polymerase/histidinol phosphatase-like SD28_RS06420 IPR004805 DNA polymerase III, alpha subunit SD28_RS06420 IPR004013 PHP domain SD28_RS06420 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type SD28_RS06420 IPR029460 DNA polymerase, helix-hairpin-helix motif SD28_RS06420 IPR040982 DNA polymerase III alpha subunit finger domain SD28_RS06420 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain SD28_RS06420 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain SD28_RS06420 IPR003141 Polymerase/histidinol phosphatase, N-terminal SD28_RS06430 IPR023346 Lysozyme-like domain superfamily SD28_RS06430 IPR023703 Membrane-bound lytic murein transglycosylase F SD28_RS06430 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SD28_RS06430 IPR008258 Transglycosylase SLT domain 1 SD28_RS06435 IPR015424 Pyridoxal phosphate-dependent transferase SD28_RS06435 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 SD28_RS06435 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme SD28_RS06435 IPR006237 L-methionine gamma-lyase SD28_RS06435 IPR015421 Pyridoxal phosphate-dependent transferase, major domain SD28_RS06440 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site SD28_RS06440 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SD28_RS06440 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I SD28_RS06440 IPR006258 Dihydrolipoamide dehydrogenase SD28_RS06440 IPR023753 FAD/NAD(P)-binding domain SD28_RS06440 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily SD28_RS06440 IPR036188 FAD/NAD(P)-binding domain superfamily SD28_RS06445 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative SD28_RS06445 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal SD28_RS06445 IPR013760 DNA topoisomerase, type IIA-like domain superfamily SD28_RS06445 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal SD28_RS06445 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta SD28_RS06445 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily SD28_RS06445 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat SD28_RS06455 IPR001714 Peptidase M24, methionine aminopeptidase SD28_RS06455 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 SD28_RS06455 IPR036005 Creatinase/aminopeptidase-like SD28_RS06455 IPR000994 Peptidase M24 SD28_RS06465 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site SD28_RS06465 IPR011053 Single hybrid motif SD28_RS06465 IPR017453 Glycine cleavage system H-protein, subgroup SD28_RS06465 IPR033753 Glycine cleavage system H-protein/Simiate SD28_RS06465 IPR002930 Glycine cleavage system H-protein SD28_RS06465 IPR000089 Biotin/lipoyl attachment SD28_RS06470 IPR004276 Glycosyltransferase family 28, N-terminal domain SD28_RS06470 IPR006009 N-acetylglucosaminyltransferase, MurG SD28_RS06470 IPR007235 Glycosyl transferase, family 28, C-terminal SD28_RS06475 IPR004401 Nucleoid-associated protein YbaB/EbfC family SD28_RS06475 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily SD28_RS06480 IPR023627 Recombination protein RecR SD28_RS06480 IPR034137 RecR, TOPRIM domain SD28_RS06480 IPR006171 TOPRIM domain SD28_RS06480 IPR015967 Recombination protein RecR, conserved site SD28_RS06480 IPR023628 Recombination protein RecR, C4-type zinc finger SD28_RS06480 IPR000093 DNA recombination protein RecR SD28_RS06485 IPR006016 UspA SD28_RS06485 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SD28_RS06485 IPR038770 Sodium/solute symporter superfamily SD28_RS06485 IPR006153 Cation/H+ exchanger SD28_RS06490 IPR007685 RelA/SpoT SD28_RS06490 IPR002912 ACT domain SD28_RS06490 IPR012675 Beta-grasp domain superfamily SD28_RS06490 IPR003607 HD/PDEase domain SD28_RS06490 IPR033655 RelA, TGS domain SD28_RS06490 IPR012676 TGS-like SD28_RS06490 IPR004095 TGS SD28_RS06490 IPR004811 RelA/SpoT family SD28_RS06500 IPR008338 Capsule biosynthesis protein CapC SD28_RS06505 IPR008337 Capsule biosynthesis protein CapB SD28_RS06505 IPR036565 Mur-like, catalytic domain superfamily SD28_RS06505 IPR013221 Mur ligase, central SD28_RS06515 IPR022462 Lysine-2,3-aminomutase-like SD28_RS06515 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase SD28_RS06515 IPR007197 Radical SAM SD28_RS06515 IPR013785 Aldolase-type TIM barrel SD28_RS06520 IPR002168 Lipase, GDXG, putative histidine active site SD28_RS06520 IPR029058 Alpha/Beta hydrolase fold SD28_RS06520 IPR033140 Lipase, GDXG, putative serine active site SD28_RS06520 IPR013094 Alpha/beta hydrolase fold-3 SD28_RS06525 IPR012340 Nucleic acid-binding, OB-fold SD28_RS06525 IPR036267 RuvA, C-terminal domain superfamily SD28_RS06525 IPR011114 Holliday junction DNA helicase RuvA, C-terminal SD28_RS06525 IPR010994 RuvA domain 2-like SD28_RS06525 IPR000085 Bacterial DNA recombination protein RuvA SD28_RS06525 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 SD28_RS06525 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial SD28_RS06535 IPR012337 Ribonuclease H-like superfamily SD28_RS06535 IPR002176 Crossover junction endodeoxyribonuclease RuvC SD28_RS06535 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site SD28_RS06535 IPR036397 Ribonuclease H superfamily SD28_RS06540 IPR017856 Integrase-like, N-terminal SD28_RS06540 IPR002876 Transcriptional regulator TACO1-like SD28_RS06540 IPR026564 Transcriptional regulator TACO1-like, domain 3 SD28_RS06540 IPR029072 YebC-like SD28_RS06545 IPR026041 Glyoxalase ElbB SD28_RS06545 IPR029062 Class I glutamine amidotransferase-like SD28_RS06550 IPR013785 Aldolase-type TIM barrel SD28_RS06550 IPR006638 Elp3/MiaB/NifB SD28_RS06550 IPR031691 Lipoyl synthase, N-terminal SD28_RS06550 IPR003698 Lipoyl synthase SD28_RS06550 IPR007197 Radical SAM SD28_RS06555 IPR009040 Ferritin-like diiron domain SD28_RS06555 IPR009078 Ferritin-like superfamily SD28_RS06555 IPR001519 Ferritin SD28_RS06555 IPR012347 Ferritin-like SD28_RS06555 IPR008331 Ferritin/DPS protein domain SD28_RS06555 IPR041719 Ferritin, prokaryotic-type SD28_RS06560 IPR003711 CarD-like/TRCF domain SD28_RS06560 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS06560 IPR037235 TRCF-like, C-terminal domain SD28_RS06560 IPR011545 DEAD/DEAH box helicase domain SD28_RS06560 IPR036101 CarD-like/TRCF domain superfamily SD28_RS06560 IPR041471 UvrB, interaction domain SD28_RS06560 IPR001650 Helicase, C-terminal SD28_RS06560 IPR014001 Helicase superfamily 1/2, ATP-binding domain SD28_RS06560 IPR005118 Transcription-repair-coupling factor, C-terminal domain SD28_RS06560 IPR004576 Transcription-repair coupling factor SD28_RS06565 IPR012337 Ribonuclease H-like superfamily SD28_RS06565 IPR036397 Ribonuclease H superfamily SD28_RS06565 IPR001598 Transposase, IS30, conserved site SD28_RS06565 IPR001584 Integrase, catalytic core SD28_RS06565 IPR009057 Homeobox-like domain superfamily SD28_RS06570 IPR004576 Transcription-repair coupling factor SD28_RS06570 IPR001650 Helicase, C-terminal SD28_RS06570 IPR037235 TRCF-like, C-terminal domain SD28_RS06570 IPR003711 CarD-like/TRCF domain SD28_RS06570 IPR005118 Transcription-repair-coupling factor, C-terminal domain SD28_RS06570 IPR041471 UvrB, interaction domain SD28_RS06570 IPR011545 DEAD/DEAH box helicase domain SD28_RS06570 IPR036101 CarD-like/TRCF domain superfamily SD28_RS06570 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS06570 IPR014001 Helicase superfamily 1/2, ATP-binding domain SD28_RS06575 IPR006214 Bax inhibitor 1-related SD28_RS06575 IPR006213 Bax inhibitor 1, conserved site SD28_RS06590 IPR005759 Endonuclease III SD28_RS06590 IPR004036 Endonuclease III-like, conserved site-2 SD28_RS06590 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif SD28_RS06590 IPR004035 Endonuclease III, iron-sulphur binding site SD28_RS06590 IPR003265 HhH-GPD domain SD28_RS06590 IPR000445 Helix-hairpin-helix motif SD28_RS06590 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal SD28_RS06590 IPR011257 DNA glycosylase SD28_RS06595 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SD28_RS06595 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria SD28_RS06595 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SD28_RS06595 IPR007202 4Fe-4S domain SD28_RS06595 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB SD28_RS06600 IPR036249 Thioredoxin-like superfamily SD28_RS06600 IPR011901 Glutaredoxin-2 SD28_RS06600 IPR004045 Glutathione S-transferase, N-terminal SD28_RS06600 IPR007494 Glutaredoxin 2, C-terminal SD28_RS06600 IPR011767 Glutaredoxin active site SD28_RS06600 IPR036282 Glutathione S-transferase, C-terminal domain superfamily SD28_RS06605 IPR001296 Glycosyl transferase, family 1 SD28_RS06615 IPR002516 Glycosyl transferase, family 11 SD28_RS06625 IPR011004 Trimeric LpxA-like superfamily SD28_RS06625 IPR001451 Hexapeptide repeat SD28_RS06625 IPR018357 Hexapeptide transferase, conserved site SD28_RS06630 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SD28_RS06630 IPR015424 Pyridoxal phosphate-dependent transferase SD28_RS06630 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 SD28_RS06630 IPR015421 Pyridoxal phosphate-dependent transferase, major domain SD28_RS06635 IPR001509 NAD-dependent epimerase/dehydratase SD28_RS06635 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase SD28_RS06635 IPR036291 NAD(P)-binding domain superfamily SD28_RS06640 IPR006368 GDP-mannose 4,6-dehydratase SD28_RS06640 IPR016040 NAD(P)-binding domain SD28_RS06640 IPR036291 NAD(P)-binding domain superfamily SD28_RS06675 IPR027806 Harbinger transposase-derived nuclease domain SD28_RS06675 IPR027805 Transposase, Helix-turn-helix domain SD28_RS06680 IPR027805 Transposase, Helix-turn-helix domain SD28_RS06680 IPR027806 Harbinger transposase-derived nuclease domain SD28_RS06690 IPR005886 UDP-glucose 4-epimerase SD28_RS06690 IPR016040 NAD(P)-binding domain SD28_RS06690 IPR036291 NAD(P)-binding domain superfamily SD28_RS06695 IPR036291 NAD(P)-binding domain superfamily SD28_RS06695 IPR001509 NAD-dependent epimerase/dehydratase SD28_RS06700 IPR029044 Nucleotide-diphospho-sugar transferases SD28_RS06700 IPR001173 Glycosyltransferase 2-like SD28_RS06715 IPR001451 Hexapeptide repeat SD28_RS06715 IPR018357 Hexapeptide transferase, conserved site SD28_RS06715 IPR039369 Galactoside O-acetyltransferase LacA-like SD28_RS06715 IPR024688 Maltose/galactoside acetyltransferase SD28_RS06715 IPR011004 Trimeric LpxA-like superfamily SD28_RS06730 IPR013132 N-acetylneuraminic acid synthase, N-terminal SD28_RS06730 IPR013974 SAF domain SD28_RS06730 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily SD28_RS06730 IPR020030 Pseudaminic acid biosynthesis, PseI SD28_RS06730 IPR013785 Aldolase-type TIM barrel SD28_RS06730 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal SD28_RS06740 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase SD28_RS06740 IPR005814 Aminotransferase class-III SD28_RS06740 IPR015424 Pyridoxal phosphate-dependent transferase SD28_RS06740 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 SD28_RS06740 IPR015421 Pyridoxal phosphate-dependent transferase, major domain SD28_RS06750 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase SD28_RS06750 IPR003329 Acylneuraminate cytidylyltransferase SD28_RS06750 IPR029044 Nucleotide-diphospho-sugar transferases SD28_RS06760 IPR015424 Pyridoxal phosphate-dependent transferase SD28_RS06760 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SD28_RS06760 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 SD28_RS06760 IPR015421 Pyridoxal phosphate-dependent transferase, major domain SD28_RS06765 IPR036291 NAD(P)-binding domain superfamily SD28_RS06765 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain SD28_RS06765 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) SD28_RS06770 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation SD28_RS06770 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal SD28_RS06770 IPR017476 UDP-glucose/GDP-mannose dehydrogenase SD28_RS06770 IPR036291 NAD(P)-binding domain superfamily SD28_RS06770 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal SD28_RS06770 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type SD28_RS06770 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily SD28_RS06770 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily SD28_RS06785 IPR003362 Bacterial sugar transferase SD28_RS06795 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SD28_RS06795 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain SD28_RS06795 IPR036291 NAD(P)-binding domain superfamily SD28_RS06800 IPR001650 Helicase, C-terminal SD28_RS06800 IPR011545 DEAD/DEAH box helicase domain SD28_RS06800 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site SD28_RS06800 IPR010222 RNA helicase HrpA SD28_RS06800 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS06800 IPR024590 RNA helicase HrpA, C-terminal SD28_RS06800 IPR003593 AAA+ ATPase domain SD28_RS06800 IPR014001 Helicase superfamily 1/2, ATP-binding domain SD28_RS06800 IPR007502 Helicase-associated domain SD28_RS06800 IPR011709 Domain of unknown function DUF1605 SD28_RS06810 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric SD28_RS06815 IPR036249 Thioredoxin-like superfamily SD28_RS06815 IPR006660 Arsenate reductase-like SD28_RS06815 IPR006659 Arsenate reductase SD28_RS06820 IPR025110 AMP-binding enzyme, C-terminal domain SD28_RS06820 IPR020845 AMP-binding, conserved site SD28_RS06820 IPR000873 AMP-dependent synthetase/ligase SD28_RS06820 IPR042099 AMP-dependent synthetase-like superfamily SD28_RS06825 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily SD28_RS06825 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily SD28_RS06825 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal SD28_RS06825 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type SD28_RS06825 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain SD28_RS06825 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal SD28_RS06825 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal SD28_RS06830 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding SD28_RS06830 IPR036291 NAD(P)-binding domain superfamily SD28_RS06830 IPR001753 Enoyl-CoA hydratase/isomerase SD28_RS06830 IPR029045 ClpP/crotonase-like domain superfamily SD28_RS06830 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal SD28_RS06830 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily SD28_RS06830 IPR013328 6-phosphogluconate dehydrogenase, domain 2 SD28_RS06835 IPR020616 Thiolase, N-terminal SD28_RS06835 IPR020613 Thiolase, conserved site SD28_RS06835 IPR020617 Thiolase, C-terminal SD28_RS06835 IPR020610 Thiolase, active site SD28_RS06835 IPR020615 Thiolase, acyl-enzyme intermediate active site SD28_RS06835 IPR016039 Thiolase-like SD28_RS06835 IPR002155 Thiolase SD28_RS06850 IPR014033 Arginase SD28_RS06850 IPR006035 Ureohydrolase SD28_RS06850 IPR023696 Ureohydrolase domain superfamily SD28_RS06850 IPR020855 Ureohydrolase, manganese-binding site SD28_RS06865 IPR011006 CheY-like superfamily SD28_RS06865 IPR036388 Winged helix-like DNA-binding domain superfamily SD28_RS06865 IPR039420 Transcriptional regulatory protein WalR-like SD28_RS06865 IPR001789 Signal transduction response regulator, receiver domain SD28_RS06865 IPR001867 OmpR/PhoB-type DNA-binding domain SD28_RS06870 IPR035965 PAS domain superfamily SD28_RS06870 IPR003594 Histidine kinase/HSP90-like ATPase SD28_RS06870 IPR004358 Signal transduction histidine kinase-related protein, C-terminal SD28_RS06870 IPR013767 PAS fold SD28_RS06870 IPR003660 HAMP domain SD28_RS06870 IPR041328 ResE, histidine kinase sensor domain SD28_RS06870 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily SD28_RS06870 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain SD28_RS06870 IPR005467 Histidine kinase domain SD28_RS06870 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SD28_RS06870 IPR000014 PAS domain SD28_RS06875 IPR014105 Carotenoid/retinoid oxidoreductase SD28_RS06875 IPR036188 FAD/NAD(P)-binding domain superfamily SD28_RS06875 IPR002937 Amine oxidase SD28_RS06885 IPR003333 Mycolic acid cyclopropane synthase SD28_RS06885 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SD28_RS06895 IPR002347 Short-chain dehydrogenase/reductase SDR SD28_RS06895 IPR020904 Short-chain dehydrogenase/reductase, conserved site SD28_RS06895 IPR036291 NAD(P)-binding domain superfamily SD28_RS06905 IPR003029 S1 domain SD28_RS06905 IPR022967 RNA-binding domain, S1 SD28_RS06905 IPR013668 Ribonuclease R winged-helix domain SD28_RS06905 IPR040476 RNase II/RNase R, cold shock domain SD28_RS06905 IPR013223 Ribonuclease B, N-terminal OB domain SD28_RS06905 IPR004476 Ribonuclease II/ribonuclease R SD28_RS06905 IPR022966 Ribonuclease II/R, conserved site SD28_RS06905 IPR001900 Ribonuclease II/R SD28_RS06905 IPR011129 Cold shock domain SD28_RS06905 IPR011805 Ribonuclease R SD28_RS06905 IPR012340 Nucleic acid-binding, OB-fold SD28_RS06910 IPR020103 Pseudouridine synthase, catalytic domain superfamily SD28_RS06910 IPR002501 Pseudouridine synthase II, N-terminal SD28_RS06910 IPR014780 tRNA pseudouridine synthase II, TruB SD28_RS06910 IPR032819 tRNA pseudouridylate synthase B, C-terminal SD28_RS06915 IPR014720 Double-stranded RNA-binding domain SD28_RS06915 IPR036389 Ribonuclease III, endonuclease domain superfamily SD28_RS06915 IPR000999 Ribonuclease III domain SD28_RS06915 IPR011907 Ribonuclease III SD28_RS06920 IPR019533 Peptidase S26 SD28_RS06920 IPR036286 LexA/Signal peptidase-like superfamily SD28_RS06920 IPR019757 Peptidase S26A, signal peptidase I, lysine active site SD28_RS06920 IPR019758 Peptidase S26A, signal peptidase I, conserved site SD28_RS06920 IPR000223 Peptidase S26A, signal peptidase I SD28_RS06920 IPR019756 Peptidase S26A, signal peptidase I, serine active site SD28_RS06925 IPR001867 OmpR/PhoB-type DNA-binding domain SD28_RS06925 IPR011006 CheY-like superfamily SD28_RS06925 IPR039420 Transcriptional regulatory protein WalR-like SD28_RS06925 IPR036388 Winged helix-like DNA-binding domain superfamily SD28_RS06925 IPR016032 Signal transduction response regulator, C-terminal effector SD28_RS06925 IPR001789 Signal transduction response regulator, receiver domain SD28_RS06930 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal SD28_RS06930 IPR036291 NAD(P)-binding domain superfamily SD28_RS06930 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily SD28_RS06930 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain SD28_RS06930 IPR000304 Pyrroline-5-carboxylate reductase SD28_RS06935 IPR029001 Inosine triphosphate pyrophosphatase-like SD28_RS06935 IPR002637 Ham1-like protein SD28_RS06935 IPR020922 dITP/XTP pyrophosphatase SD28_RS06940 IPR039901 3-deoxy-D-manno-octulosonic acid transferase SD28_RS06940 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily SD28_RS06940 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal SD28_RS06940 IPR001296 Glycosyl transferase, family 1 SD28_RS06945 IPR008949 Isoprenoid synthase domain superfamily SD28_RS06945 IPR000092 Polyprenyl synthetase SD28_RS06945 IPR033749 Polyprenyl synthetase, conserved site SD28_RS06950 IPR000462 CDP-alcohol phosphatidyltransferase SD28_RS06950 IPR026027 Phosphatidylcholine synthase Pcs SD28_RS06955 IPR022486 Polyphosphate kinase 2, PA0141 SD28_RS06955 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS06955 IPR022488 Polyphosphate kinase-2-related SD28_RS06970 IPR038717 Tc1-like transposase, DDE domain SD28_RS06985 IPR036397 Ribonuclease H superfamily SD28_RS06985 IPR001598 Transposase, IS30, conserved site SD28_RS06985 IPR012337 Ribonuclease H-like superfamily SD28_RS06985 IPR001584 Integrase, catalytic core SD28_RS06985 IPR009057 Homeobox-like domain superfamily SD28_RS06990 IPR005982 Thioredoxin reductase SD28_RS06990 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site SD28_RS06990 IPR023753 FAD/NAD(P)-binding domain SD28_RS06990 IPR036188 FAD/NAD(P)-binding domain superfamily SD28_RS07000 IPR020568 Ribosomal protein S5 domain 2-type fold SD28_RS07000 IPR037198 MutL, C-terminal domain superfamily SD28_RS07000 IPR042121 MutL, C-terminal domain, regulatory subdomain SD28_RS07000 IPR042120 MutL, C-terminal domain, dimerisation subdomain SD28_RS07000 IPR014790 MutL, C-terminal, dimerisation SD28_RS07000 IPR020667 DNA mismatch repair protein, MutL SD28_RS07000 IPR014762 DNA mismatch repair, conserved site SD28_RS07000 IPR013507 DNA mismatch repair protein, S5 domain 2-like SD28_RS07000 IPR002099 DNA mismatch repair protein family, N-terminal SD28_RS07000 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SD28_RS07000 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms SD28_RS07000 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SD28_RS07010 IPR010914 RsgA GTPase domain SD28_RS07010 IPR004881 Ribosome biogenesis GTPase RsgA SD28_RS07010 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS07010 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain SD28_RS07015 IPR005148 Arginyl tRNA synthetase N-terminal domain SD28_RS07015 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily SD28_RS07015 IPR035684 Arginyl-tRNA synthetase, catalytic core domain SD28_RS07015 IPR008909 DALR anticodon binding SD28_RS07015 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SD28_RS07015 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding SD28_RS07015 IPR001278 Arginine-tRNA ligase SD28_RS07015 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site SD28_RS07020 IPR020889 LPS-assembly protein LptD SD28_RS07020 IPR007543 LptD, C-terminal SD28_RS07020 IPR005653 Organic solvent tolerance-like, N-terminal SD28_RS07025 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type SD28_RS07025 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site SD28_RS07025 IPR023034 Peptidyl-prolyl isomerase SurA SD28_RS07025 IPR015391 SurA N-terminal SD28_RS07025 IPR027304 Trigger factor/SurA domain superfamily SD28_RS07030 IPR023165 rRNA adenine dimethylase-like SD28_RS07030 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm SD28_RS07030 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site SD28_RS07030 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal SD28_RS07030 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SD28_RS07030 IPR011530 Ribosomal RNA adenine dimethylase SD28_RS07035 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) SD28_RS07035 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type SD28_RS07035 IPR029052 Metallo-dependent phosphatase-like SD28_RS07040 IPR036441 Dehydroquinase, class II superfamily SD28_RS07040 IPR018509 Dehydroquinase, class II, conserved site SD28_RS07040 IPR001874 Dehydroquinase, class II SD28_RS07045 IPR000089 Biotin/lipoyl attachment SD28_RS07045 IPR011053 Single hybrid motif SD28_RS07045 IPR001882 Biotin-binding site SD28_RS07045 IPR001249 Acetyl-CoA biotin carboxyl carrier SD28_RS07050 IPR011764 Biotin carboxylation domain SD28_RS07050 IPR005482 Biotin carboxylase, C-terminal SD28_RS07050 IPR016185 Pre-ATP-grasp domain superfamily SD28_RS07050 IPR011054 Rudiment single hybrid motif SD28_RS07050 IPR011761 ATP-grasp fold SD28_RS07050 IPR013815 ATP-grasp fold, subdomain 1 SD28_RS07050 IPR005481 Biotin carboxylase-like, N-terminal domain SD28_RS07050 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase SD28_RS07050 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain SD28_RS07065 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal SD28_RS07065 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) SD28_RS07065 IPR006195 Aminoacyl-tRNA synthetase, class II SD28_RS07065 IPR004525 Elongation factor P--(R)-beta-lysine ligase SD28_RS07075 IPR038763 DHH phosphoesterase superfamily SD28_RS07075 IPR001667 DDH domain SD28_RS07075 IPR041122 RecJ, OB domain SD28_RS07075 IPR003156 DHHA1 domain SD28_RS07075 IPR004610 Bacterial RecJ exonuclease SD28_RS07080 IPR002549 Transmembrane protein TqsA-like SD28_RS07085 IPR011049 Serralysin-like metalloprotease, C-terminal SD28_RS07085 IPR003995 RTX toxin determinant A SD28_RS07085 IPR010566 Haemolysin-type calcium binding-related SD28_RS07085 IPR018511 Hemolysin-type calcium-binding conserved site SD28_RS07085 IPR001343 RTX calcium-binding nonapeptide repeat SD28_RS07095 IPR011335 Restriction endonuclease type II-like SD28_RS07095 IPR007569 Protein of unknown function DUF559 SD28_RS07115 IPR010129 Type I secretion membrane fusion protein, HlyD family SD28_RS07115 IPR006144 Secretion protein HlyD, conserved site SD28_RS07120 IPR039395 Peptidase C39-like A SD28_RS07120 IPR039421 Type I protein exporter SD28_RS07120 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS07120 IPR010132 ATPase, type I secretion system, HlyB SD28_RS07120 IPR017871 ABC transporter, conserved site SD28_RS07120 IPR003439 ABC transporter-like SD28_RS07120 IPR036640 ABC transporter type 1, transmembrane domain superfamily SD28_RS07120 IPR005074 Peptidase C39, bacteriocin processing SD28_RS07120 IPR011527 ABC transporter type 1, transmembrane domain SD28_RS07120 IPR003593 AAA+ ATPase domain SD28_RS07130 IPR002293 Amino acid/polyamine transporter I SD28_RS07135 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein SD28_RS07135 IPR006059 Bacterial extracellular solute-binding protein SD28_RS07150 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase SD28_RS07150 IPR001537 tRNA/rRNA methyltransferase, SpoU type SD28_RS07150 IPR029028 Alpha/beta knot methyltransferases SD28_RS07150 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SD28_RS07155 IPR013785 Aldolase-type TIM barrel SD28_RS07155 IPR001731 Delta-aminolevulinic acid dehydratase SD28_RS07155 IPR030656 Delta-aminolevulinic acid dehydratase, active site SD28_RS07160 IPR035920 YhbY-like superfamily SD28_RS07160 IPR017924 RNA-binding protein YhbY SD28_RS07160 IPR001890 RNA-binding, CRM domain SD28_RS07165 IPR004622 DNA polymerase III, delta prime subunit SD28_RS07165 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal SD28_RS07165 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS07165 IPR015199 DNA polymerase III, delta subunit, C-terminal SD28_RS07170 IPR002142 Peptidase S49 SD28_RS07170 IPR013703 Peptidase S49, N-terminal proteobacteria SD28_RS07170 IPR029045 ClpP/crotonase-like domain superfamily SD28_RS07175 IPR034341 Stringent starvation protein A, N-terminal SD28_RS07175 IPR004046 Glutathione S-transferase, C-terminal SD28_RS07175 IPR004045 Glutathione S-transferase, N-terminal SD28_RS07175 IPR040079 Glutathione Transferase family SD28_RS07175 IPR036282 Glutathione S-transferase, C-terminal domain superfamily SD28_RS07175 IPR010987 Glutathione S-transferase, C-terminal-like SD28_RS07175 IPR036249 Thioredoxin-like superfamily SD28_RS07180 IPR042072 DsrC-like protein, C-terminal domain SD28_RS07180 IPR025526 DsrC-like domain superfamily SD28_RS07180 IPR007453 Sulphur transfer protein DsrC/TusE SD28_RS07185 IPR007457 Fe(II) trafficking protein YggX SD28_RS07185 IPR036766 Fe(II) trafficking protein YggX superfamily SD28_RS07190 IPR003342 Glycosyl transferase family 39/83 SD28_RS07190 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase SD28_RS07195 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily SD28_RS07195 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SD28_RS07205 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA SD28_RS07205 IPR013437 Probable peptidoglycan glycosyltransferase FtsW SD28_RS07205 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site SD28_RS07210 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase SD28_RS07210 IPR004101 Mur ligase, C-terminal SD28_RS07210 IPR036615 Mur ligase, C-terminal domain superfamily SD28_RS07210 IPR036565 Mur-like, catalytic domain superfamily SD28_RS07210 IPR013221 Mur ligase, central SD28_RS07215 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase SD28_RS07215 IPR000715 Glycosyl transferase, family 4 SD28_RS07215 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site SD28_RS07225 IPR011129 Cold shock domain SD28_RS07225 IPR019844 Cold-shock (CSD) domain SD28_RS07225 IPR002059 Cold-shock protein, DNA-binding SD28_RS07225 IPR012340 Nucleic acid-binding, OB-fold SD28_RS07225 IPR012156 Cold shock, CspA SD28_RS07230 IPR001911 Ribosomal protein S21 SD28_RS07230 IPR038380 Ribosomal protein S21 superfamily SD28_RS07240 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath SD28_RS07300 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising SD28_RS07300 IPR017932 Glutamine amidotransferase type 2 domain SD28_RS07300 IPR035490 GlmS/FrlB, SIS domain 2 SD28_RS07300 IPR035466 GlmS/AgaS, SIS domain 1 SD28_RS07300 IPR029055 Nucleophile aminohydrolases, N-terminal SD28_RS07300 IPR001347 Sugar isomerase (SIS) SD28_RS07305 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase SD28_RS07305 IPR038009 GlmU, C-terminal LbH domain SD28_RS07305 IPR001451 Hexapeptide repeat SD28_RS07305 IPR018357 Hexapeptide transferase, conserved site SD28_RS07305 IPR011004 Trimeric LpxA-like superfamily SD28_RS07305 IPR029044 Nucleotide-diphospho-sugar transferases SD28_RS07305 IPR025877 MobA-like NTP transferase SD28_RS07310 IPR020084 NUDIX hydrolase, conserved site SD28_RS07310 IPR015797 NUDIX hydrolase-like domain superfamily SD28_RS07310 IPR041750 Bifunctional NMN adenylyltransferase/Nudix hydrolase, N-terminal NMNAT domain SD28_RS07310 IPR004821 Cytidyltransferase-like domain SD28_RS07310 IPR000086 NUDIX hydrolase domain SD28_RS07310 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SD28_RS07320 IPR003817 Phosphatidylserine decarboxylase-related SD28_RS07320 IPR033177 Phosphatidylserine decarboxylase SD28_RS07320 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 SD28_RS07330 IPR027785 UvrD-like helicase C-terminal domain SD28_RS07330 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain SD28_RS07330 IPR006344 RecBCD enzyme subunit RecD SD28_RS07330 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS07335 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type SD28_RS07335 IPR014016 UvrD-like helicase, ATP-binding domain SD28_RS07335 IPR011604 Exonuclease, phage-type/RecB, C-terminal SD28_RS07335 IPR000212 DNA helicase, UvrD/REP type SD28_RS07335 IPR011335 Restriction endonuclease type II-like SD28_RS07335 IPR014017 UvrD-like DNA helicase, C-terminal SD28_RS07335 IPR034739 UvrD/AddA helicase, N-terminal SD28_RS07335 IPR004586 RecBCD enzyme subunit RecB SD28_RS07335 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS07340 IPR008915 Peptidase M50 SD28_RS07360 IPR007685 RelA/SpoT SD28_RS07360 IPR012676 TGS-like SD28_RS07360 IPR002912 ACT domain SD28_RS07360 IPR012675 Beta-grasp domain superfamily SD28_RS07360 IPR033655 RelA, TGS domain SD28_RS07360 IPR003607 HD/PDEase domain SD28_RS07360 IPR004811 RelA/SpoT family SD28_RS07360 IPR004095 TGS SD28_RS07370 IPR013061 Tryptophan/tryrosine permease, conserved site SD28_RS07370 IPR018227 Amino acid/polyamine transporter 2 SD28_RS07370 IPR013059 Tryptophan/tyrosine transporter SD28_RS07380 IPR018253 DnaJ domain, conserved site SD28_RS07380 IPR002939 Chaperone DnaJ, C-terminal SD28_RS07380 IPR008971 HSP40/DnaJ peptide-binding SD28_RS07380 IPR023859 DNA-binding protein, curved-DNA SD28_RS07380 IPR036869 Chaperone J-domain superfamily SD28_RS07380 IPR001623 DnaJ domain SD28_RS07395 IPR036388 Winged helix-like DNA-binding domain superfamily SD28_RS07395 IPR023546 Methylated-DNA--protein-cysteine methyltransferase SD28_RS07395 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain SD28_RS07395 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain SD28_RS07395 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site SD28_RS07395 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily SD28_RS07395 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding SD28_RS07400 IPR002293 Amino acid/polyamine transporter I SD28_RS07405 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain SD28_RS07405 IPR033922 NAD(P) binding domain of glutamate dehydrogenase SD28_RS07405 IPR036291 NAD(P)-binding domain superfamily SD28_RS07405 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal SD28_RS07405 IPR033524 Leu/Phe/Val dehydrogenases active site SD28_RS07405 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase SD28_RS07405 IPR014362 Glutamate dehydrogenase SD28_RS07410 IPR023166 HI0933-like insert domain superfamily SD28_RS07410 IPR036188 FAD/NAD(P)-binding domain superfamily SD28_RS07410 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like SD28_RS07420 IPR002347 Short-chain dehydrogenase/reductase SDR SD28_RS07420 IPR020904 Short-chain dehydrogenase/reductase, conserved site SD28_RS07420 IPR036291 NAD(P)-binding domain superfamily SD28_RS07425 IPR023753 FAD/NAD(P)-binding domain SD28_RS07425 IPR036188 FAD/NAD(P)-binding domain superfamily SD28_RS07435 IPR027410 TCP-1-like chaperonin intermediate domain superfamily SD28_RS07435 IPR027413 GroEL-like equatorial domain superfamily SD28_RS07435 IPR027409 GroEL-like apical domain superfamily SD28_RS07435 IPR002423 Chaperonin Cpn60/TCP-1 family SD28_RS07435 IPR001844 Chaperonin Cpn60 SD28_RS07435 IPR018370 Chaperonin Cpn60, conserved site SD28_RS07440 IPR020818 GroES chaperonin family SD28_RS07440 IPR037124 GroES chaperonin superfamily SD28_RS07440 IPR018369 Chaperonin GroES, conserved site SD28_RS07440 IPR011032 GroES-like superfamily SD28_RS07460 IPR011773 DNA-directed RNA polymerase, alpha subunit SD28_RS07460 IPR036643 DNA-directed RNA polymerase, insert domain superfamily SD28_RS07460 IPR011260 RNA polymerase, alpha subunit, C-terminal SD28_RS07460 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type SD28_RS07460 IPR036603 RNA polymerase, RBP11-like subunit SD28_RS07465 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal SD28_RS07465 IPR003959 ATPase, AAA-type, core SD28_RS07465 IPR032423 AAA C-terminal domain SD28_RS07465 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS07465 IPR003593 AAA+ ATPase domain SD28_RS07465 IPR021886 MgsA AAA+ ATPase C-terminal SD28_RS07470 IPR003695 Ppx/GppA phosphatase SD28_RS07470 IPR022371 Exopolyphosphatase SD28_RS07475 IPR036249 Thioredoxin-like superfamily SD28_RS07475 IPR017937 Thioredoxin, conserved site SD28_RS07475 IPR005746 Thioredoxin SD28_RS07475 IPR013766 Thioredoxin domain SD28_RS07480 IPR011112 Rho termination factor, N-terminal SD28_RS07480 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain SD28_RS07480 IPR011129 Cold shock domain SD28_RS07480 IPR012340 Nucleic acid-binding, OB-fold SD28_RS07480 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS07480 IPR041703 Transcription termination factor Rho, ATP binding domain SD28_RS07480 IPR003593 AAA+ ATPase domain SD28_RS07480 IPR004665 Transcription termination factor Rho SD28_RS07480 IPR036269 Rho termination factor, N-terminal domain superfamily SD28_RS07480 IPR011113 Rho termination factor, RNA-binding domain SD28_RS07520 IPR007815 Erythromycin esterase SD28_RS07520 IPR000836 Phosphoribosyltransferase domain SD28_RS07520 IPR029057 Phosphoribosyltransferase-like SD28_RS07525 IPR000836 Phosphoribosyltransferase domain SD28_RS07525 IPR002925 Dienelactone hydrolase SD28_RS07525 IPR029057 Phosphoribosyltransferase-like SD28_RS07525 IPR029058 Alpha/Beta hydrolase fold SD28_RS07535 IPR029057 Phosphoribosyltransferase-like SD28_RS07535 IPR000836 Phosphoribosyltransferase domain SD28_RS07535 IPR002925 Dienelactone hydrolase SD28_RS07535 IPR029058 Alpha/Beta hydrolase fold SD28_RS07540 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site SD28_RS07540 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain SD28_RS07540 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding SD28_RS07540 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal SD28_RS07540 IPR023458 Methionine-tRNA ligase, type 1 SD28_RS07540 IPR014758 Methionyl-tRNA synthetase SD28_RS07540 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SD28_RS07540 IPR033911 Methioninyl-tRNA synthetase core domain SD28_RS07540 IPR012340 Nucleic acid-binding, OB-fold SD28_RS07540 IPR002547 tRNA-binding domain SD28_RS07540 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding SD28_RS07540 IPR015413 Methionyl/Leucyl tRNA synthetase SD28_RS07540 IPR029038 Methionyl-tRNA synthetase, Zn-domain SD28_RS07550 IPR006070 YrdC-like domain SD28_RS07550 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily SD28_RS07555 IPR006008 Intracellular septation protein A SD28_RS07565 IPR003836 Glucokinase SD28_RS07570 IPR004033 UbiE/COQ5 methyltransferase SD28_RS07570 IPR023576 UbiE/COQ5 methyltransferase, conserved site SD28_RS07570 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SD28_RS07580 IPR004147 UbiB domain SD28_RS07580 IPR010232 Probable protein kinase UbiB SD28_RS07580 IPR011009 Protein kinase-like domain superfamily SD28_RS07585 IPR036265 HIT-like superfamily SD28_RS07585 IPR011146 HIT-like domain SD28_RS07585 IPR001310 Histidine triad (HIT) protein SD28_RS07585 IPR019808 Histidine triad, conserved site SD28_RS07590 IPR005222 Competence protein ComF SD28_RS07590 IPR000836 Phosphoribosyltransferase domain SD28_RS07590 IPR029057 Phosphoribosyltransferase-like SD28_RS07595 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SD28_RS07595 IPR013216 Methyltransferase type 11 SD28_RS07595 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC SD28_RS07605 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase SD28_RS07605 IPR016169 FAD-binding, type PCMH, subdomain 2 SD28_RS07605 IPR006094 FAD linked oxidase, N-terminal SD28_RS07605 IPR036318 FAD-binding, type PCMH-like superfamily SD28_RS07605 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily SD28_RS07605 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal SD28_RS07605 IPR016167 FAD-binding, type PCMH, subdomain 1 SD28_RS07605 IPR016166 FAD-binding domain, PCMH-type SD28_RS07610 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase SD28_RS07610 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta SD28_RS07610 IPR001986 Enolpyruvate transferase domain SD28_RS07610 IPR036968 Enolpyruvate transferase domain superfamily SD28_RS07615 IPR016484 GTP-binding protein EngA SD28_RS07615 IPR006073 GTP binding domain SD28_RS07615 IPR032859 GTPase Der, C-terminal KH-domain-like SD28_RS07615 IPR015946 K homology domain-like, alpha/beta SD28_RS07615 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS07615 IPR005225 Small GTP-binding protein domain SD28_RS07615 IPR031166 EngA-type guanine nucleotide-binding (G) domain SD28_RS07640 IPR012301 Malic enzyme, N-terminal domain SD28_RS07640 IPR036291 NAD(P)-binding domain superfamily SD28_RS07640 IPR023667 NAD-dependent malic enzyme, proteobacteria SD28_RS07640 IPR012302 Malic enzyme, NAD-binding SD28_RS07640 IPR001891 Malic oxidoreductase SD28_RS07640 IPR037062 Malic enzyme, N-terminal domain superfamily SD28_RS07640 IPR015884 Malic enzyme, conserved site SD28_RS07645 IPR015864 FAD synthetase SD28_RS07645 IPR004821 Cytidyltransferase-like domain SD28_RS07645 IPR023468 Riboflavin kinase SD28_RS07645 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SD28_RS07645 IPR023465 Riboflavin kinase domain superfamily SD28_RS07645 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic SD28_RS07645 IPR002606 Riboflavin kinase, bacterial SD28_RS07650 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain SD28_RS07650 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SD28_RS07650 IPR010663 Zinc finger, FPG/IleRS-type SD28_RS07650 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding SD28_RS07650 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding SD28_RS07650 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain SD28_RS07650 IPR002301 Isoleucine-tRNA ligase SD28_RS07650 IPR023585 Isoleucine-tRNA ligase, type 1 SD28_RS07650 IPR002300 Aminoacyl-tRNA synthetase, class Ia SD28_RS07650 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site SD28_RS07655 IPR001872 Peptidase A8, signal peptidase II SD28_RS07665 IPR015507 Ribosomal RNA large subunit methyltransferase E SD28_RS07665 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SD28_RS07665 IPR002877 Ribosomal RNA methyltransferase FtsJ domain SD28_RS07675 IPR029062 Class I glutamine amidotransferase-like SD28_RS07675 IPR017926 Glutamine amidotransferase SD28_RS07675 IPR001674 GMP synthase, C-terminal SD28_RS07675 IPR004739 GMP synthase, glutamine amidotransferase SD28_RS07675 IPR022955 GMP synthase SD28_RS07675 IPR025777 GMP synthetase ATP pyrophosphatase domain SD28_RS07675 IPR022310 NAD/GMP synthase SD28_RS07675 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SD28_RS07680 IPR003115 ParB/Sulfiredoxin SD28_RS07680 IPR004437 ParB/RepB/Spo0J partition protein SD28_RS07680 IPR041468 ParB/Spo0J, HTH domain SD28_RS07680 IPR036086 ParB/Sulfiredoxin superfamily SD28_RS07685 IPR025669 AAA domain SD28_RS07685 IPR027417 P-loop containing nucleoside triphosphate hydrolase SD28_RS07690 IPR023405 DNA topoisomerase, type IA, core domain SD28_RS07690 IPR006171 TOPRIM domain SD28_RS07690 IPR000380 DNA topoisomerase, type IA SD28_RS07690 IPR003601 DNA topoisomerase, type IA, domain 2 SD28_RS07690 IPR023406 DNA topoisomerase, type IA, active site SD28_RS07690 IPR013497 DNA topoisomerase, type IA, central SD28_RS07690 IPR034149 DNA topoisomerase 1, TOPRIM domain SD28_RS07690 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 SD28_RS07690 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SD28_RS07690 IPR003602 DNA topoisomerase, type IA, DNA-binding domain SD28_RS07690 IPR005733 DNA topoisomerase I, bacterial-type SD28_RS07690 IPR028612 DNA topoisomerase I, type IA SD28_RS07690 IPR025589 Topoisomerase C-terminal repeat SD28_RS07690 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 SD28_RS07710 IPR003961 Fibronectin type III SD28_RS07715 IPR036748 MTH938-like superfamily SD28_RS07715 IPR007523 NDUFAF3/Mth938 domain-containing protein SD28_RS07800 IPR038717 Tc1-like transposase, DDE domain