SD28_RS00030 SM01001 AIR carboxylase SD28_RS00040 SM01209 SD28_RS00040 SD28_RS00040 SM01210 SD28_RS00040 SD28_RS00090 SM00382 ATPases associated with a variety of cellular activities SD28_RS00105 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SD28_RS00175 SM00729 Elongator protein 3, MiaB family, Radical SAM SD28_RS00235 SM00320 WD40 repeats SD28_RS00300 SM00937 SD28_RS00300 SD28_RS00315 SM00564 beta-propeller repeat SD28_RS00325 SM00387 Histidine kinase-like ATPases SD28_RS00325 SM00433 TopoisomeraseII SD28_RS00335 SM00644 SD28_RS00335 SD28_RS00340 SM00014 Acid phosphatase homologues SD28_RS00345 SM00382 ATPases associated with a variety of cellular activities SD28_RS00345 SM00962 SRP54-type protein, GTPase domain SD28_RS00345 SM00963 SRP54-type protein, helical bundle domain SD28_RS00350 SM00257 Lysin motif SD28_RS00370 SM01133 SD28_RS00370 SD28_RS00385 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs SD28_RS00385 SM00474 3'-5' exonuclease SD28_RS00385 SM00475 5'-3' exonuclease SD28_RS00385 SM00482 DNA polymerase A domain SD28_RS00415 SM00382 ATPases associated with a variety of cellular activities SD28_RS00480 SM00387 Histidine kinase-like ATPases SD28_RS00480 SM00388 His Kinase A (phosphoacceptor) domain SD28_RS00520 SM00729 Elongator protein 3, MiaB family, Radical SAM SD28_RS00560 SM00487 DEAD-like helicases superfamily SD28_RS00560 SM00490 helicase superfamily c-terminal domain SD28_RS00595 SM00382 ATPases associated with a variety of cellular activities SD28_RS00615 SM01230 SD28_RS00615 SD28_RS00620 SM00248 ankyrin repeats SD28_RS00650 SM00367 Leucine-rich repeat - CC (cysteine-containing) subfamily SD28_RS00680 SM00320 WD40 repeats SD28_RS00690 SM00382 ATPases associated with a variety of cellular activities SD28_RS00735 SM00363 S4 RNA-binding domain SD28_RS00765 SM00316 Ribosomal protein S1-like RNA-binding domain SD28_RS00765 SM00322 K homology RNA-binding domain SD28_RS00785 SM00382 ATPases associated with a variety of cellular activities SD28_RS00855 SM00861 Transketolase, pyrimidine binding domain SD28_RS00910 SM00937 SD28_RS00910 SD28_RS00945 SM00797 Allophanate hydrolase subunit 2 SD28_RS00955 SM00796 Allophanate hydrolase subunit 1 SD28_RS00970 SM00838 Elongation factor G C-terminus SD28_RS01040 SM00487 DEAD-like helicases superfamily SD28_RS01040 SM00490 helicase superfamily c-terminal domain SD28_RS01065 SM00382 ATPases associated with a variety of cellular activities SD28_RS01075 SM00450 Rhodanese Homology Domain SD28_RS01080 SM00935 Outer membrane protein (OmpH-like) SD28_RS01130 SM00064 Protein present in Fab1, YOTB, Vac1, and EEA1 SD28_RS01150 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family SD28_RS01260 SM00563 Phosphate acyltransferases SD28_RS01265 SM00563 Phosphate acyltransferases SD28_RS01295 SM00382 ATPases associated with a variety of cellular activities SD28_RS01330 SM00316 Ribosomal protein S1-like RNA-binding domain SD28_RS01335 SM00382 ATPases associated with a variety of cellular activities SD28_RS01335 SM00760 Bacterial dnaA protein helix-turn-helix domain SD28_RS01340 SM00480 DNA polymerase III beta subunit SD28_RS01345 SM00495 Chitin-binding domain type 3 SD28_RS01345 SM00636 SD28_RS01345 SD28_RS01360 SM00851 MGS-like domain SD28_RS01360 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SD28_RS01365 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain SD28_RS01380 SM00955 SD28_RS01380 SD28_RS01410 SM00382 ATPases associated with a variety of cellular activities SD28_RS01455 SM01152 SD28_RS01455 SD28_RS01585 SM00479 SD28_RS01585 SD28_RS01590 SM00841 Elongation factor P, C-terminal SD28_RS01590 SM01185 SD28_RS01590 SD28_RS01675 SM00382 ATPases associated with a variety of cellular activities SD28_RS01675 SM01086 C-terminal, D2-small domain, of ClpB protein SD28_RS01705 SM00563 Phosphate acyltransferases SD28_RS01720 SM00316 Ribosomal protein S1-like RNA-binding domain SD28_RS01740 SM00842 Cell division protein FtsA SD28_RS01745 SM00864 Tubulin/FtsZ family, GTPase domain SD28_RS01745 SM00865 Tubulin/FtsZ family, C-terminal domain SD28_RS01755 SM00382 ATPases associated with a variety of cellular activities SD28_RS01815 SM01211 SD28_RS01815 SD28_RS01845 SM00845 GatB domain SD28_RS01865 SM01006 Siderophore biosynthesis protein domain SD28_RS01960 SM00184 Ring finger SD28_RS01990 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SD28_RS01995 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SD28_RS02050 SM00729 Elongator protein 3, MiaB family, Radical SAM SD28_RS02080 SM00327 von Willebrand factor (vWF) type A domain SD28_RS02085 SM00327 von Willebrand factor (vWF) type A domain SD28_RS02090 SM00028 Tetratricopeptide repeats SD28_RS02130 SM00798 AICARFT/IMPCHase bienzyme SD28_RS02130 SM00851 MGS-like domain SD28_RS02140 SM00788 Adenylosuccinate synthetase SD28_RS02165 SM00382 ATPases associated with a variety of cellular activities SD28_RS02200 SM00487 DEAD-like helicases superfamily SD28_RS02300 SM00838 Elongation factor G C-terminus SD28_RS02300 SM00889 Elongation factor G, domain IV SD28_RS02305 SM01403 SD28_RS02305 SD28_RS02325 SM01382 SD28_RS02325 SD28_RS02325 SM01383 SD28_RS02325 SD28_RS02340 SM00322 K homology RNA-binding domain SD28_RS02360 SM01374 SD28_RS02360 SD28_RS02430 SM00363 S4 RNA-binding domain SD28_RS02430 SM01390 SD28_RS02430 SD28_RS02435 SM00662 RNA polymerases D SD28_RS02445 SM00387 Histidine kinase-like ATPases SD28_RS02455 SM00562 SD28_RS02455 SD28_RS02475 SM00671 Sel1-like repeats. SD28_RS02505 SM00244 prohibitin homologues SD28_RS02580 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. SD28_RS02580 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. SD28_RS02585 SM00649 Ribosomal protein L11/L12 SD28_RS02610 SM00663 RNA polymerase I subunit A N-terminus SD28_RS02700 SM00495 Chitin-binding domain type 3 SD28_RS02700 SM00636 SD28_RS02700 SD28_RS02710 SM00945 ProQ/FINO family SD28_RS02740 SM00843 SD28_RS02740 SD28_RS02750 SM00859 Semialdehyde dehydrogenase, NAD binding domain SD28_RS02805 SM00184 Ring finger SD28_RS02810 SM00840 SD28_RS02810 SD28_RS02870 SM00062 Bacterial periplasmic substrate-binding proteins SD28_RS02885 SM00382 ATPases associated with a variety of cellular activities SD28_RS02905 SM00316 Ribosomal protein S1-like RNA-binding domain SD28_RS02935 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SD28_RS02940 SM00450 Rhodanese Homology Domain SD28_RS02945 SM00849 Metallo-beta-lactamase superfamily SD28_RS02950 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. SD28_RS02990 SM00248 ankyrin repeats SD28_RS03025 SM00849 Metallo-beta-lactamase superfamily SD28_RS03035 SM00899 SD28_RS03035 SD28_RS03105 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SD28_RS03105 SM00292 breast cancer carboxy-terminal domain SD28_RS03105 SM00532 Ligase N family SD28_RS03150 SM00533 DNA-binding domain of DNA mismatch repair MUTS family SD28_RS03150 SM00534 ATPase domain of DNA mismatch repair MUTS family SD28_RS03240 SM00421 helix_turn_helix, Lux Regulon SD28_RS03305 SM00852 Probable molybdopterin binding domain SD28_RS03305 SM01329 SD28_RS03305 SD28_RS03345 SM00986 Uracil DNA glycosylase superfamily SD28_RS03345 SM00987 UreE urease accessory protein, C-terminal domain SD28_RS03350 SM00434 DNA Topoisomerase IV SD28_RS03365 SM00935 Outer membrane protein (OmpH-like) SD28_RS03400 SM00881 CoA binding domain SD28_RS03425 SM00387 Histidine kinase-like ATPases SD28_RS03425 SM00433 TopoisomeraseII SD28_RS03430 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain SD28_RS03430 SM01232 SD28_RS03430 SD28_RS03455 SM01387 SD28_RS03455 SD28_RS03460 SM00316 Ribosomal protein S1-like RNA-binding domain SD28_RS03460 SM00322 K homology RNA-binding domain SD28_RS03480 SM01409 SD28_RS03480 SD28_RS03510 SM01192 SD28_RS03510 SD28_RS03510 SM01193 SD28_RS03510 SD28_RS03530 SM00829 Enoylreductase SD28_RS03540 SM00495 Chitin-binding domain type 3 SD28_RS03540 SM00636 SD28_RS03540 SD28_RS03545 SM00060 Fibronectin type 3 domain SD28_RS03545 SM00495 Chitin-binding domain type 3 SD28_RS03625 SM00852 Probable molybdopterin binding domain SD28_RS03650 SM00450 Rhodanese Homology Domain SD28_RS03660 SM00382 ATPases associated with a variety of cellular activities SD28_RS03660 SM00930 SD28_RS03660 SD28_RS03665 SM01207 SD28_RS03665 SD28_RS03705 SM01323 SD28_RS03705 SD28_RS03745 SM00870 SD28_RS03745 SD28_RS03750 SM00947 Carbonic anhydrase SD28_RS03770 SM00382 ATPases associated with a variety of cellular activities SD28_RS03770 SM00994 ClpX C4-type zinc finger SD28_RS03770 SM01086 C-terminal, D2-small domain, of ClpB protein SD28_RS03775 SM00382 ATPases associated with a variety of cellular activities SD28_RS03775 SM00464 Found in ATP-dependent protease La (LON) SD28_RS03780 SM00411 bacterial (prokaryotic) histone like domain SD28_RS03820 SM00244 prohibitin homologues SD28_RS03825 SM00244 prohibitin homologues SD28_RS03830 SM00226 Low molecular weight phosphatase family SD28_RS03870 SM00116 Domain in cystathionine beta-synthase and other proteins. SD28_RS03935 SM00530 Helix-turn-helix XRE-family like proteins SD28_RS04010 SM00925 MltA specific insert domain SD28_RS04025 SM00271 DnaJ molecular chaperone homology domain SD28_RS04030 SM00387 Histidine kinase-like ATPases SD28_RS04105 SM00382 ATPases associated with a variety of cellular activities SD28_RS04115 SM00047 Lysozyme subfamily 2 SD28_RS04120 SM00363 S4 RNA-binding domain SD28_RS04125 SM00028 Tetratricopeptide repeats SD28_RS04140 SM00248 ankyrin repeats SD28_RS04170 SM01005 Alanine racemase, C-terminal domain SD28_RS04225 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain SD28_RS04265 SM01228 SD28_RS04265 SD28_RS04305 SM00487 DEAD-like helicases superfamily SD28_RS04305 SM00490 helicase superfamily c-terminal domain SD28_RS04310 SM00479 SD28_RS04310 SD28_RS04335 SM00382 ATPases associated with a variety of cellular activities SD28_RS04355 SM00382 ATPases associated with a variety of cellular activities SD28_RS04355 SM01086 C-terminal, D2-small domain, of ClpB protein SD28_RS04375 SM00363 S4 RNA-binding domain SD28_RS04390 SM00981 SD28_RS04390 SD28_RS04425 SM00905 Dihydroneopterin aldolase SD28_RS04455 SM00479 SD28_RS04455 SD28_RS04480 SM01150 SD28_RS04480 SD28_RS04495 SM00400 zinc finger SD28_RS04495 SM00493 SD28_RS04495 SD28_RS04595 SM00487 DEAD-like helicases superfamily SD28_RS04595 SM00490 helicase superfamily c-terminal domain SD28_RS04640 SM00072 Guanylate kinase homologues. SD28_RS04665 SM00729 Elongator protein 3, MiaB family, Radical SAM SD28_RS04665 SM00876 Biotin and Thiamin Synthesis associated domain SD28_RS04675 SM00977 TilS substrate C-terminal domain SD28_RS04695 SM00316 Ribosomal protein S1-like RNA-binding domain SD28_RS04735 SM00382 ATPases associated with a variety of cellular activities SD28_RS04755 SM00474 3'-5' exonuclease SD28_RS04760 SM00465 GIY-YIG type nucleases (URI domain) SD28_RS04805 SM00450 Rhodanese Homology Domain SD28_RS04810 SM00355 zinc finger SD28_RS04845 SM00936 Penicillin-binding protein 5, C-terminal domain SD28_RS04895 SM01321 SD28_RS04895 SD28_RS04920 SM00382 ATPases associated with a variety of cellular activities SD28_RS04920 SM00962 SRP54-type protein, GTPase domain SD28_RS04920 SM00963 SRP54-type protein, helical bundle domain SD28_RS04935 SM00316 Ribosomal protein S1-like RNA-binding domain SD28_RS04950 SM00382 ATPases associated with a variety of cellular activities SD28_RS04955 SM00967 RNA 2'-O ribose methyltransferase substrate binding SD28_RS04965 SM00116 Domain in cystathionine beta-synthase and other proteins. SD28_RS04970 SM00100 Cyclic nucleotide-monophosphate binding domain SD28_RS04985 SM00857 Resolvase, N terminal domain SD28_RS05000 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain SD28_RS05000 SM00355 zinc finger SD28_RS05120 SM00487 DEAD-like helicases superfamily SD28_RS05120 SM00490 helicase superfamily c-terminal domain SD28_RS05135 SM00148 Phospholipase C, catalytic domain (part); domain X SD28_RS05175 SM00861 Transketolase, pyrimidine binding domain SD28_RS05185 SM00382 ATPases associated with a variety of cellular activities SD28_RS05190 SM00064 Protein present in Fab1, YOTB, Vac1, and EEA1 SD28_RS05285 SM00873 B3/4 domain SD28_RS05285 SM00874 tRNA synthetase B5 domain SD28_RS05285 SM00896 Ferredoxin-fold anticodon binding domain SD28_RS05290 SM00155 Phospholipase D. Active site motifs. SD28_RS05320 SM00732 Likely ribonuclease with RNase H fold. SD28_RS05360 SM00382 ATPases associated with a variety of cellular activities SD28_RS05405 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain SD28_RS05435 SM00830 Chorismate mutase type II SD28_RS05505 SM00965 Secretin and TonB N terminus short domain SD28_RS05575 SM00671 Sel1-like repeats. SD28_RS05595 SM00729 Elongator protein 3, MiaB family, Radical SAM SD28_RS05610 SM01091 Transporter associated domain SD28_RS05670 SM00477 DNA/RNA non-specific endonuclease SD28_RS05670 SM00892 DNA/RNA non-specific endonuclease SD28_RS05730 SM01091 Transporter associated domain SD28_RS05740 SM01400 SD28_RS05740 SD28_RS05745 SM00679 Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins. SD28_RS05760 SM00363 S4 RNA-binding domain SD28_RS05770 SM00729 Elongator protein 3, MiaB family, Radical SAM SD28_RS05885 SM00382 ATPases associated with a variety of cellular activities SD28_RS05890 SM00382 ATPases associated with a variety of cellular activities SD28_RS05930 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SD28_RS05945 SM00495 Chitin-binding domain type 3 SD28_RS05965 SM00382 ATPases associated with a variety of cellular activities SD28_RS06025 SM00825 Beta-ketoacyl synthase SD28_RS06035 SM00822 SD28_RS06035 SD28_RS06040 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. SD28_RS06065 SM00861 Transketolase, pyrimidine binding domain SD28_RS06070 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SD28_RS06090 SM00320 WD40 repeats SD28_RS06105 SM00382 ATPases associated with a variety of cellular activities SD28_RS06140 SM00957 SecA DEAD-like domain SD28_RS06140 SM00958 SecA preprotein cross-linking domain SD28_RS06160 SM00382 ATPases associated with a variety of cellular activities SD28_RS06185 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain SD28_RS06190 SM00116 Domain in cystathionine beta-synthase and other proteins. SD28_RS06190 SM01240 SD28_RS06190 SD28_RS06245 SM00357 Cold shock protein domain SD28_RS06390 SM00382 ATPases associated with a variety of cellular activities SD28_RS06420 SM00481 DNA polymerase alpha chain like domain SD28_RS06440 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain SD28_RS06445 SM00434 DNA Topoisomerase IV SD28_RS06480 SM00493 SD28_RS06480 SD28_RS06490 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SD28_RS06490 SM00954 Region found in RelA / SpoT proteins SD28_RS06525 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SD28_RS06550 SM00729 Elongator protein 3, MiaB family, Radical SAM SD28_RS06560 SM00487 DEAD-like helicases superfamily SD28_RS06560 SM00490 helicase superfamily c-terminal domain SD28_RS06560 SM00982 SD28_RS06560 SD28_RS06560 SM01058 CarD-like/TRCF domain SD28_RS06590 SM00478 endonuclease III SD28_RS06590 SM00525 SD28_RS06590 SD28_RS06770 SM00984 UDP binding domain SD28_RS06800 SM00382 ATPases associated with a variety of cellular activities SD28_RS06800 SM00487 DEAD-like helicases superfamily SD28_RS06800 SM00490 helicase superfamily c-terminal domain SD28_RS06800 SM00847 Helicase associated domain (HA2) Add an annotation SD28_RS06865 SM00448 cheY-homologous receiver domain SD28_RS06865 SM00862 Transcriptional regulatory protein, C terminal SD28_RS06870 SM00387 Histidine kinase-like ATPases SD28_RS06870 SM00388 His Kinase A (phosphoacceptor) domain SD28_RS06905 SM00316 Ribosomal protein S1-like RNA-binding domain SD28_RS06905 SM00955 SD28_RS06905 SD28_RS06915 SM00358 Double-stranded RNA binding motif SD28_RS06915 SM00535 Ribonuclease III family SD28_RS06925 SM00448 cheY-homologous receiver domain SD28_RS06925 SM00862 Transcriptional regulatory protein, C terminal SD28_RS06980 SM00184 Ring finger SD28_RS07000 SM00853 MutL C terminal dimerisation domain SD28_RS07000 SM01340 SD28_RS07000 SD28_RS07015 SM00836 DALR anticodon binding domain SD28_RS07015 SM01016 Arginyl tRNA synthetase N terminal dom SD28_RS07030 SM00650 Ribosomal RNA adenine dimethylases SD28_RS07050 SM00878 Biotin carboxylase C-terminal domain SD28_RS07120 SM00382 ATPases associated with a variety of cellular activities SD28_RS07155 SM01004 Delta-aminolevulinic acid dehydratase SD28_RS07160 SM01103 SD28_RS07160 SD28_RS07195 SM00014 Acid phosphatase homologues SD28_RS07200 SM00248 ankyrin repeats SD28_RS07225 SM00357 Cold shock protein domain SD28_RS07360 SM00954 Region found in RelA / SpoT proteins SD28_RS07380 SM00271 DnaJ molecular chaperone homology domain SD28_RS07405 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SD28_RS07440 SM00883 Chaperonin 10 Kd subunit SD28_RS07460 SM00662 RNA polymerases D SD28_RS07465 SM00382 ATPases associated with a variety of cellular activities SD28_RS07480 SM00357 Cold shock protein domain SD28_RS07480 SM00382 ATPases associated with a variety of cellular activities SD28_RS07480 SM00959 Rho termination factor, N-terminal domain SD28_RS07640 SM00919 Malic enzyme, NAD binding domain SD28_RS07640 SM01274 SD28_RS07640 SD28_RS07645 SM00904 Riboflavin kinase SD28_RS07680 SM00470 ParB-like nuclease domain SD28_RS07690 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain SD28_RS07690 SM00437 Bacterial DNA topoisomerase I DNA-binding domain SD28_RS07690 SM00493 SD28_RS07690 SD28_RS07750 SM00248 ankyrin repeats SD28_RS07755 SM00365 Leucine-rich repeat, SDS22-like subfamily SD28_RS07755 SM00367 Leucine-rich repeat - CC (cysteine-containing) subfamily SD28_RS07755 SM00368 Leucine rich repeat, ribonuclease inhibitor type SD28_RS07785 SM00670 Large family of predicted nucleotide-binding domains SD28_RS07810 SM00248 ankyrin repeats