locus-tag class description LF543_RS00005 PF00308 Bacterial dnaA protein LF543_RS00005 PF11638 DnaA N-terminal domain LF543_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix LF543_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LF543_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LF543_RS00010 PF02767 DNA polymerase III beta subunit, central domain LF543_RS00020 PF02463 RecF/RecN/SMC N terminal domain LF543_RS00025 PF00204 DNA gyrase B LF543_RS00025 PF01751 Toprim domain LF543_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus LF543_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LF543_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller LF543_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A LF543_RS00035 PF00478 IMP dehydrogenase / GMP reductase domain LF543_RS00040 PF01250 Ribosomal protein S6 LF543_RS00045 PF00436 Single-strand binding protein family LF543_RS00050 PF01084 Ribosomal protein S18 LF543_RS00055 PF01368 DHH family LF543_RS00055 PF02272 DHHA1 domain LF543_RS00060 PF01281 Ribosomal protein L9, N-terminal domain LF543_RS00060 PF03948 Ribosomal protein L9, C-terminal domain LF543_RS00065 PF03796 DnaB-like helicase C terminal domain LF543_RS00065 PF00772 DnaB-like helicase N terminal domain LF543_RS00080 PF00072 Response regulator receiver domain LF543_RS00080 PF00486 Transcriptional regulatory protein, C terminal LF543_RS00085 PF00672 HAMP domain LF543_RS00085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LF543_RS00085 PF00512 His Kinase A (phospho-acceptor) domain LF543_RS00085 PF13426 PAS domain LF543_RS00100 PF00753 Metallo-beta-lactamase superfamily LF543_RS00105 PF13180 PDZ domain LF543_RS00110 PF02590 Predicted SPOUT methyltransferase LF543_RS00120 PF01323 DSBA-like thioredoxin domain LF543_RS00130 PF03358 NADPH-dependent FMN reductase LF543_RS00150 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LF543_RS00150 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LF543_RS00155 PF13520 Amino acid permease LF543_RS00160 PF00696 Amino acid kinase family LF543_RS00170 PF00106 short chain dehydrogenase LF543_RS00180 PF01773 Na+ dependent nucleoside transporter N-terminus LF543_RS00180 PF07662 Na+ dependent nucleoside transporter C-terminus LF543_RS00195 PF07687 Peptidase dimerisation domain LF543_RS00195 PF01546 Peptidase family M20/M25/M40 LF543_RS00200 PF03180 NLPA lipoprotein LF543_RS00220 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LF543_RS00220 PF00205 Thiamine pyrophosphate enzyme, central domain LF543_RS00220 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LF543_RS00235 PF03547 Membrane transport protein LF543_RS00240 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LF543_RS00240 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LF543_RS00250 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LF543_RS00250 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LF543_RS00255 PF00288 GHMP kinases N terminal domain LF543_RS00255 PF10509 Galactokinase galactose-binding signature LF543_RS00255 PF08544 GHMP kinases C terminal LF543_RS00260 PF00128 Alpha amylase, catalytic domain LF543_RS00360 PF02595 Glycerate kinase family LF543_RS00365 PF04203 Sortase domain LF543_RS00375 PF06458 MucBP domain LF543_RS00400 PF01965 DJ-1/PfpI family LF543_RS00405 PF01979 Amidohydrolase family LF543_RS00410 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LF543_RS00410 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LF543_RS00415 PF01180 Dihydroorotate dehydrogenase LF543_RS00455 PF07690 Major Facilitator Superfamily LF543_RS00460 PF02073 Thermophilic metalloprotease (M29) LF543_RS00465 PF01501 Glycosyl transferase family 8 LF543_RS00480 PF00348 Polyprenyl synthetase LF543_RS00485 PF00664 ABC transporter transmembrane region LF543_RS00485 PF00005 ABC transporter LF543_RS00490 PF00005 ABC transporter LF543_RS00490 PF00664 ABC transporter transmembrane region LF543_RS00495 PF02322 Cytochrome bd terminal oxidase subunit II LF543_RS00500 PF01654 Cytochrome bd terminal oxidase subunit I LF543_RS00505 PF07992 Pyridine nucleotide-disulphide oxidoreductase LF543_RS00510 PF02329 Histidine carboxylase PI chain LF543_RS00525 PF17760 UvrA interaction domain LF543_RS00525 PF17755 UvrA DNA-binding domain LF543_RS00525 PF00005 ABC transporter LF543_RS00530 PF12464 Maltose acetyltransferase LF543_RS00530 PF00132 Bacterial transferase hexapeptide (six repeats) LF543_RS00545 PF00155 Aminotransferase class I and II LF543_RS00550 PF00884 Sulfatase LF543_RS00555 PF03060 Nitronate monooxygenase LF543_RS00575 PF00356 Bacterial regulatory proteins, lacI family LF543_RS00590 PF00117 Glutamine amidotransferase class-I LF543_RS00590 PF02540 NAD synthase LF543_RS00590 PF00958 GMP synthase C terminal domain LF543_RS00595 PF00478 IMP dehydrogenase / GMP reductase domain LF543_RS00595 PF00571 CBS domain LF543_RS00600 PF03129 Anticodon binding domain LF543_RS00600 PF13393 Histidyl-tRNA synthetase LF543_RS00605 PF13520 Amino acid permease LF543_RS00610 PF09335 SNARE associated Golgi protein LF543_RS00615 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LF543_RS00615 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LF543_RS00625 PF00654 Voltage gated chloride channel LF543_RS00650 PF03180 NLPA lipoprotein LF543_RS00655 PF00356 Bacterial regulatory proteins, lacI family LF543_RS00670 PF00294 pfkB family carbohydrate kinase LF543_RS00675 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LF543_RS00675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LF543_RS00680 PF13520 Amino acid permease LF543_RS00685 PF00106 short chain dehydrogenase LF543_RS00710 PF00005 ABC transporter LF543_RS00710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LF543_RS00715 PF00005 ABC transporter LF543_RS00715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LF543_RS00720 PF00528 Binding-protein-dependent transport system inner membrane component LF543_RS00720 PF12911 N-terminal TM domain of oligopeptide transport permease C LF543_RS00725 PF00528 Binding-protein-dependent transport system inner membrane component LF543_RS00730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LF543_RS00735 PF03051 Peptidase C1-like family LF543_RS00740 PF03180 NLPA lipoprotein LF543_RS00745 PF09383 NIL domain LF543_RS00745 PF00005 ABC transporter LF543_RS00750 PF00528 Binding-protein-dependent transport system inner membrane component LF543_RS00755 PF07687 Peptidase dimerisation domain LF543_RS00755 PF01546 Peptidase family M20/M25/M40 LF543_RS00775 PF01757 Acyltransferase family LF543_RS00780 PF10431 C-terminal, D2-small domain, of ClpB protein LF543_RS00780 PF00004 ATPase family associated with various cellular activities (AAA) LF543_RS00780 PF17871 AAA lid domain LF543_RS00780 PF07724 AAA domain (Cdc48 subfamily) LF543_RS00785 PF01272 Transcription elongation factor, GreA/GreB, C-term LF543_RS00785 PF03449 Transcription elongation factor, N-terminal LF543_RS00790 PF03816 Cell envelope-related transcriptional attenuator domain LF543_RS00795 PF02397 Bacterial sugar transferase LF543_RS00805 PF00535 Glycosyl transferase family 2 LF543_RS00815 PF03275 UDP-galactopyranose mutase LF543_RS00820 PF01943 Polysaccharide biosynthesis protein LF543_RS00820 PF14667 Polysaccharide biosynthesis C-terminal domain LF543_RS00850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LF543_RS00850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LF543_RS00855 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LF543_RS00855 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LF543_RS00910 PF08240 Alcohol dehydrogenase GroES-like domain LF543_RS00910 PF00107 Zinc-binding dehydrogenase LF543_RS00935 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LF543_RS00935 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LF543_RS00945 PF02558 Ketopantoate reductase PanE/ApbA LF543_RS00945 PF08546 Ketopantoate reductase PanE/ApbA C terminal LF543_RS00955 PF06314 Acetoacetate decarboxylase (ADC) LF543_RS00970 PF05368 NmrA-like family LF543_RS00990 PF00300 Histidine phosphatase superfamily (branch 1) LF543_RS00995 PF00465 Iron-containing alcohol dehydrogenase LF543_RS01000 PF04237 YjbR LF543_RS01005 PF02361 Cobalt transport protein LF543_RS01010 PF02632 BioY family LF543_RS01025 PF00528 Binding-protein-dependent transport system inner membrane component LF543_RS01030 PF00528 Binding-protein-dependent transport system inner membrane component LF543_RS01035 PF00497 Bacterial extracellular solute-binding proteins, family 3 LF543_RS01040 PF00005 ABC transporter LF543_RS01050 PF07690 Major Facilitator Superfamily LF543_RS01055 PF14748 Pyrroline-5-carboxylate reductase dimerisation LF543_RS01055 PF03807 NADP oxidoreductase coenzyme F420-dependent LF543_RS01065 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LF543_RS01065 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LF543_RS01065 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LF543_RS01065 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LF543_RS01075 PF16363 GDP-mannose 4,6 dehydratase LF543_RS01080 PF00892 EamA-like transporter family LF543_RS01085 PF03176 MMPL family LF543_RS01090 PF00892 EamA-like transporter family LF543_RS01100 PF00892 EamA-like transporter family LF543_RS01110 PF00072 Response regulator receiver domain LF543_RS01110 PF00486 Transcriptional regulatory protein, C terminal LF543_RS01120 PF07690 Major Facilitator Superfamily LF543_RS01125 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LF543_RS01130 PF00156 Phosphoribosyl transferase domain LF543_RS01135 PF08240 Alcohol dehydrogenase GroES-like domain LF543_RS01135 PF00107 Zinc-binding dehydrogenase LF543_RS01145 PF00248 Aldo/keto reductase family LF543_RS01165 PF00248 Aldo/keto reductase family LF543_RS01170 PF04343 Protein of unknown function, DUF488 LF543_RS01180 PF07977 FabA-like domain LF543_RS01185 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LF543_RS01185 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LF543_RS01190 PF00550 Phosphopantetheine attachment site LF543_RS01195 PF00698 Acyl transferase domain LF543_RS01205 PF02801 Beta-ketoacyl synthase, C-terminal domain LF543_RS01205 PF00109 Beta-ketoacyl synthase, N-terminal domain LF543_RS01210 PF00364 Biotin-requiring enzyme LF543_RS01215 PF07977 FabA-like domain LF543_RS01220 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LF543_RS01220 PF00289 Biotin carboxylase, N-terminal domain LF543_RS01220 PF02785 Biotin carboxylase C-terminal domain LF543_RS01225 PF01039 Carboxyl transferase domain LF543_RS01230 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LF543_RS01240 PF07977 FabA-like domain LF543_RS01245 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LF543_RS01245 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LF543_RS01250 PF00550 Phosphopantetheine attachment site LF543_RS01255 PF02801 Beta-ketoacyl synthase, C-terminal domain LF543_RS01255 PF00109 Beta-ketoacyl synthase, N-terminal domain LF543_RS01260 PF00364 Biotin-requiring enzyme LF543_RS01265 PF00289 Biotin carboxylase, N-terminal domain LF543_RS01265 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LF543_RS01265 PF02785 Biotin carboxylase C-terminal domain LF543_RS01270 PF01039 Carboxyl transferase domain LF543_RS01275 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LF543_RS01285 PF02237 Biotin protein ligase C terminal domain LF543_RS01285 PF03099 Biotin/lipoate A/B protein ligase family LF543_RS01285 PF08279 HTH domain LF543_RS01290 PF01321 Creatinase/Prolidase N-terminal domain LF543_RS01290 PF00557 Metallopeptidase family M24 LF543_RS01295 PF00709 Adenylosuccinate synthetase LF543_RS01300 PF10397 Adenylosuccinate lyase C-terminus LF543_RS01300 PF00206 Lyase LF543_RS01310 PF00206 Lyase LF543_RS01310 PF10415 Fumarase C C-terminus LF543_RS01335 PF00313 'Cold-shock' DNA-binding domain LF543_RS01340 PF02525 Flavodoxin-like fold LF543_RS01350 PF00583 Acetyltransferase (GNAT) family LF543_RS01355 PF01546 Peptidase family M20/M25/M40 LF543_RS01355 PF07687 Peptidase dimerisation domain LF543_RS01360 PF01116 Fructose-bisphosphate aldolase class-II LF543_RS01370 PF08543 Phosphomethylpyrimidine kinase LF543_RS01375 PF00107 Zinc-binding dehydrogenase LF543_RS01375 PF08240 Alcohol dehydrogenase GroES-like domain LF543_RS01390 PF00075 RNase H LF543_RS01395 PF14602 Hexapeptide repeat of succinyl-transferase LF543_RS01395 PF12464 Maltose acetyltransferase LF543_RS01395 PF00132 Bacterial transferase hexapeptide (six repeats) LF543_RS01400 PF02028 BCCT, betaine/carnitine/choline family transporter LF543_RS01405 PF00582 Universal stress protein family LF543_RS01410 PF02245 Methylpurine-DNA glycosylase (MPG) LF543_RS01420 PF00557 Metallopeptidase family M24 LF543_RS01455 PF01431 Peptidase family M13 LF543_RS01455 PF05649 Peptidase family M13 LF543_RS01460 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LF543_RS01465 PF00528 Binding-protein-dependent transport system inner membrane component LF543_RS01470 PF00005 ABC transporter LF543_RS01470 PF00571 CBS domain LF543_RS01485 PF01475 Ferric uptake regulator family LF543_RS01520 PF00005 ABC transporter LF543_RS01550 PF00106 short chain dehydrogenase LF543_RS01555 PF00857 Isochorismatase family LF543_RS01565 PF08543 Phosphomethylpyrimidine kinase LF543_RS01570 PF02581 Thiamine monophosphate synthase LF543_RS01575 PF02110 Hydroxyethylthiazole kinase family LF543_RS01600 PF01161 Phosphatidylethanolamine-binding protein LF543_RS01610 PF13520 Amino acid permease LF543_RS01615 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LF543_RS01620 PF12848 ABC transporter LF543_RS01620 PF00005 ABC transporter LF543_RS01625 PF00561 alpha/beta hydrolase fold LF543_RS01640 PF00999 Sodium/hydrogen exchanger family LF543_RS01645 PF00293 NUDIX domain LF543_RS01650 PF00625 Guanylate kinase LF543_RS01665 PF13520 Amino acid permease LF543_RS01670 PF16360 GTP-binding GTPase Middle Region LF543_RS01670 PF13167 GTP-binding GTPase N-terminal LF543_RS01670 PF01926 50S ribosome-binding GTPase LF543_RS01675 PF00300 Histidine phosphatase superfamily (branch 1) LF543_RS01680 PF00999 Sodium/hydrogen exchanger family LF543_RS01680 PF02254 TrkA-N domain LF543_RS01680 PF02080 TrkA-C domain LF543_RS01685 PF13538 UvrD-like helicase C-terminal domain LF543_RS01690 PF00485 Phosphoribulokinase / Uridine kinase family LF543_RS01695 PF03965 Penicillinase repressor LF543_RS01710 PF00849 RNA pseudouridylate synthase LF543_RS01725 PF01545 Cation efflux family LF543_RS01725 PF16916 Dimerisation domain of Zinc Transporter LF543_RS01745 PF01678 Diaminopimelate epimerase LF543_RS01750 PF00696 Amino acid kinase family LF543_RS01750 PF13840 ACT domain LF543_RS01755 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LF543_RS01755 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LF543_RS01760 PF00132 Bacterial transferase hexapeptide (six repeats) LF543_RS01760 PF14602 Hexapeptide repeat of succinyl-transferase LF543_RS01760 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal LF543_RS01765 PF07687 Peptidase dimerisation domain LF543_RS01765 PF01546 Peptidase family M20/M25/M40 LF543_RS01770 PF00701 Dihydrodipicolinate synthetase family LF543_RS01775 PF05173 Dihydrodipicolinate reductase, C-terminus LF543_RS01775 PF01113 Dihydrodipicolinate reductase, N-terminus LF543_RS01780 PF02774 Semialdehyde dehydrogenase, dimerisation domain LF543_RS01780 PF01118 Semialdehyde dehydrogenase, NAD binding domain LF543_RS01785 PF00155 Aminotransferase class I and II LF543_RS01795 PF01925 Sulfite exporter TauE/SafE LF543_RS01805 PF00324 Amino acid permease LF543_RS01810 PF01712 Deoxynucleoside kinase LF543_RS01815 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LF543_RS01815 PF02403 Seryl-tRNA synthetase N-terminal domain LF543_RS01855 PF13089 Polyphosphate kinase N-terminal domain LF543_RS01855 PF17941 Polyphosphate kinase C-terminal domain 1 LF543_RS01855 PF02503 Polyphosphate kinase middle domain LF543_RS01855 PF13090 Polyphosphate kinase C-terminal domain 2 LF543_RS01875 PF05848 CtsR N-terminal HTH domain LF543_RS01875 PF17727 CtsR C-terminal dimerization domain LF543_RS01880 PF02861 Clp amino terminal domain, pathogenicity island component LF543_RS01880 PF17871 AAA lid domain LF543_RS01880 PF00004 ATPase family associated with various cellular activities (AAA) LF543_RS01880 PF07724 AAA domain (Cdc48 subfamily) LF543_RS01880 PF10431 C-terminal, D2-small domain, of ClpB protein LF543_RS01885 PF00562 RNA polymerase Rpb2, domain 6 LF543_RS01885 PF04565 RNA polymerase Rpb2, domain 3 LF543_RS01885 PF10385 RNA polymerase beta subunit external 1 domain LF543_RS01885 PF04561 RNA polymerase Rpb2, domain 2 LF543_RS01885 PF04563 RNA polymerase beta subunit LF543_RS01885 PF04560 RNA polymerase Rpb2, domain 7 LF543_RS01890 PF04983 RNA polymerase Rpb1, domain 3 LF543_RS01890 PF05000 RNA polymerase Rpb1, domain 4 LF543_RS01890 PF04997 RNA polymerase Rpb1, domain 1 LF543_RS01890 PF00623 RNA polymerase Rpb1, domain 2 LF543_RS01890 PF04998 RNA polymerase Rpb1, domain 5 LF543_RS01895 PF00156 Phosphoribosyl transferase domain LF543_RS01900 PF06750 Bacterial Peptidase A24 N-terminal domain LF543_RS01900 PF01478 Type IV leader peptidase family LF543_RS01905 PF00164 Ribosomal protein S12/S23 LF543_RS01910 PF00177 Ribosomal protein S7p/S5e LF543_RS01915 PF00679 Elongation factor G C-terminus LF543_RS01915 PF14492 Elongation Factor G, domain II LF543_RS01915 PF03764 Elongation factor G, domain IV LF543_RS01915 PF00009 Elongation factor Tu GTP binding domain LF543_RS01915 PF03144 Elongation factor Tu domain 2 LF543_RS01920 PF00338 Ribosomal protein S10p/S20e LF543_RS01925 PF00297 Ribosomal protein L3 LF543_RS01930 PF00573 Ribosomal protein L4/L1 family LF543_RS01935 PF00276 Ribosomal protein L23 LF543_RS01940 PF00181 Ribosomal Proteins L2, RNA binding domain LF543_RS01940 PF03947 Ribosomal Proteins L2, C-terminal domain LF543_RS01945 PF00203 Ribosomal protein S19 LF543_RS01950 PF00237 Ribosomal protein L22p/L17e LF543_RS01955 PF07650 KH domain LF543_RS01955 PF00189 Ribosomal protein S3, C-terminal domain LF543_RS01960 PF00252 Ribosomal protein L16p/L10e LF543_RS01965 PF00831 Ribosomal L29 protein LF543_RS01970 PF00366 Ribosomal protein S17 LF543_RS01975 PF00238 Ribosomal protein L14p/L23e LF543_RS01980 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LF543_RS01980 PF00467 KOW motif LF543_RS01985 PF00281 Ribosomal protein L5 LF543_RS01985 PF00673 ribosomal L5P family C-terminus LF543_RS01990 PF00253 Ribosomal protein S14p/S29e LF543_RS01995 PF00410 Ribosomal protein S8 LF543_RS02000 PF00347 Ribosomal protein L6 LF543_RS02005 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LF543_RS02010 PF03719 Ribosomal protein S5, C-terminal domain LF543_RS02010 PF00333 Ribosomal protein S5, N-terminal domain LF543_RS02015 PF00327 Ribosomal protein L30p/L7e LF543_RS02020 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LF543_RS02025 PF00344 SecY translocase LF543_RS02030 PF05191 Adenylate kinase, active site lid LF543_RS02035 PF01176 Translation initiation factor 1A / IF-1 LF543_RS02040 PF00444 Ribosomal protein L36 LF543_RS02045 PF00416 Ribosomal protein S13/S18 LF543_RS02050 PF00411 Ribosomal protein S11 LF543_RS02055 PF01000 RNA polymerase Rpb3/RpoA insert domain LF543_RS02055 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LF543_RS02055 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LF543_RS02060 PF01196 Ribosomal protein L17 LF543_RS02065 PF00005 ABC transporter LF543_RS02070 PF00005 ABC transporter LF543_RS02075 PF02361 Cobalt transport protein LF543_RS02080 PF01416 tRNA pseudouridine synthase LF543_RS02085 PF00572 Ribosomal protein L13 LF543_RS02090 PF00380 Ribosomal protein S9/S16 LF543_RS02095 PF12822 ECF transporter, substrate-specific component LF543_RS02105 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LF543_RS02105 PF13457 GW (Gly-Tryp) dipeptide domain LF543_RS02110 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LF543_RS02110 PF02222 ATP-grasp domain LF543_RS02115 PF00580 UvrD/REP helicase N-terminal domain LF543_RS02115 PF13361 UvrD-like helicase C-terminal domain LF543_RS02120 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LF543_RS02120 PF03120 NAD-dependent DNA ligase OB-fold domain LF543_RS02120 PF00533 BRCA1 C Terminus (BRCT) domain LF543_RS02120 PF12826 Helix-hairpin-helix motif LF543_RS02120 PF01653 NAD-dependent DNA ligase adenylation domain LF543_RS02125 PF07537 CamS sex pheromone cAM373 precursor LF543_RS02130 PF02686 Glu-tRNAGln amidotransferase C subunit LF543_RS02135 PF01425 Amidase LF543_RS02140 PF02934 GatB/GatE catalytic domain LF543_RS02140 PF02637 GatB domain LF543_RS02145 PF00781 Diacylglycerol kinase catalytic domain LF543_RS02150 PF01938 TRAM domain LF543_RS02150 PF05958 tRNA (Uracil-5-)-methyltransferase LF543_RS02155 PF13520 Amino acid permease LF543_RS02160 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LF543_RS02160 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LF543_RS02170 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LF543_RS02175 PF00270 DEAD/DEAH box helicase LF543_RS02175 PF00271 Helicase conserved C-terminal domain LF543_RS02185 PF06800 Sugar transport protein LF543_RS02190 PF06800 Sugar transport protein LF543_RS02195 PF02447 GntP family permease LF543_RS02200 PF00535 Glycosyl transferase family 2 LF543_RS02205 PF02350 UDP-N-acetylglucosamine 2-epimerase LF543_RS02210 PF03631 Virulence factor BrkB LF543_RS02215 PF00258 Flavodoxin LF543_RS02220 PF02631 RecX family LF543_RS02225 PF01594 AI-2E family transporter LF543_RS02230 PF01467 Cytidylyltransferase-like LF543_RS02240 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase LF543_RS02245 PF00009 Elongation factor Tu GTP binding domain LF543_RS02245 PF03144 Elongation factor Tu domain 2 LF543_RS02245 PF16658 Class II release factor RF3, C-terminal domain LF543_RS02250 PF03577 Peptidase family C69 LF543_RS02255 PF06458 MucBP domain LF543_RS02260 PF00004 ATPase family associated with various cellular activities (AAA) LF543_RS02260 PF07724 AAA domain (Cdc48 subfamily) LF543_RS02260 PF17871 AAA lid domain LF543_RS02260 PF10431 C-terminal, D2-small domain, of ClpB protein LF543_RS02270 PF00381 PTS HPr component phosphorylation site LF543_RS02275 PF05524 PEP-utilising enzyme, N-terminal LF543_RS02275 PF02896 PEP-utilising enzyme, TIM barrel domain LF543_RS02275 PF00391 PEP-utilising enzyme, mobile domain LF543_RS02280 PF13439 Glycosyltransferase Family 4 LF543_RS02280 PF00534 Glycosyl transferases group 1 LF543_RS02285 PF00534 Glycosyl transferases group 1 LF543_RS02285 PF13439 Glycosyltransferase Family 4 LF543_RS02295 PF00884 Sulfatase LF543_RS02385 PF07969 Amidohydrolase family LF543_RS02390 PF08240 Alcohol dehydrogenase GroES-like domain LF543_RS02395 PF00860 Permease family LF543_RS02400 PF00497 Bacterial extracellular solute-binding proteins, family 3 LF543_RS02405 PF00528 Binding-protein-dependent transport system inner membrane component LF543_RS02410 PF00005 ABC transporter LF543_RS02420 PF00438 S-adenosylmethionine synthetase, N-terminal domain LF543_RS02420 PF02772 S-adenosylmethionine synthetase, central domain LF543_RS02420 PF02773 S-adenosylmethionine synthetase, C-terminal domain LF543_RS02425 PF07690 Major Facilitator Superfamily LF543_RS02430 PF06962 Putative rRNA methylase LF543_RS02435 PF13603 Leucyl-tRNA synthetase, Domain 2 LF543_RS02435 PF00133 tRNA synthetases class I (I, L, M and V) LF543_RS02435 PF08264 Anticodon-binding domain of tRNA LF543_RS02435 PF09334 tRNA synthetases class I (M) LF543_RS02440 PF14667 Polysaccharide biosynthesis C-terminal domain LF543_RS02440 PF01943 Polysaccharide biosynthesis protein LF543_RS02445 PF01256 Carbohydrate kinase LF543_RS02450 PF01546 Peptidase family M20/M25/M40 LF543_RS02455 PF01712 Deoxynucleoside kinase LF543_RS02470 PF04608 Phosphatidylglycerophosphatase A LF543_RS02485 PF01501 Glycosyl transferase family 8 LF543_RS02490 PF00589 Phage integrase family LF543_RS02490 PF14659 Phage integrase, N-terminal SAM-like domain LF543_RS02565 PF00436 Single-strand binding protein family LF543_RS02735 PF01047 MarR family LF543_RS02740 PF02875 Mur ligase family, glutamate ligase domain LF543_RS02740 PF08245 Mur ligase middle domain LF543_RS02750 PF01177 Asp/Glu/Hydantoin racemase LF543_RS02765 PF00750 tRNA synthetases class I (R) LF543_RS02765 PF03485 Arginyl tRNA synthetase N terminal domain LF543_RS02765 PF05746 DALR anticodon binding domain LF543_RS02770 PF00912 Transglycosylase LF543_RS02770 PF00905 Penicillin binding protein transpeptidase domain LF543_RS02775 PF06133 Control of competence regulator ComK, YlbF/YmcA LF543_RS02780 PF00149 Calcineurin-like phosphoesterase LF543_RS02785 PF13514 AAA domain LF543_RS02790 PF01966 HD domain LF543_RS02805 PF01230 HIT domain LF543_RS02810 PF00005 ABC transporter LF543_RS02820 PF02390 Putative methyltransferase LF543_RS02830 PF00085 Thioredoxin LF543_RS02835 PF01588 Putative tRNA binding domain LF543_RS02835 PF14794 Domain of unknown function (DUF4479) LF543_RS02840 PF17854 FtsK alpha domain LF543_RS02840 PF01580 FtsK/SpoIIIE family LF543_RS02840 PF09397 Ftsk gamma domain LF543_RS02845 PF02875 Mur ligase family, glutamate ligase domain LF543_RS02845 PF08245 Mur ligase middle domain LF543_RS02845 PF01225 Mur ligase family, catalytic domain LF543_RS02850 PF01027 Inhibitor of apoptosis-promoting Bax1 LF543_RS02855 PF01367 5'-3' exonuclease, C-terminal SAM fold LF543_RS02855 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LF543_RS02855 PF00476 DNA polymerase family A LF543_RS02860 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LF543_RS02860 PF06827 Zinc finger found in FPG and IleRS LF543_RS02860 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LF543_RS02865 PF01121 Dephospho-CoA kinase LF543_RS02870 PF03477 ATP cone domain LF543_RS02880 PF01695 IstB-like ATP binding protein LF543_RS02880 PF07319 Primosomal protein DnaI N-terminus LF543_RS02885 PF03129 Anticodon binding domain LF543_RS02885 PF02824 TGS domain LF543_RS02885 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LF543_RS02885 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LF543_RS02890 PF00707 Translation initiation factor IF-3, C-terminal domain LF543_RS02890 PF05198 Translation initiation factor IF-3, N-terminal domain LF543_RS02895 PF01632 Ribosomal protein L35 LF543_RS02900 PF00453 Ribosomal protein L20 LF543_RS02910 PF01926 50S ribosome-binding GTPase LF543_RS02915 PF01985 CRS1 / YhbY (CRM) domain LF543_RS02920 PF01467 Cytidylyltransferase-like LF543_RS02935 PF13649 Methyltransferase domain LF543_RS02940 PF05636 HIGH Nucleotidyl Transferase LF543_RS02950 PF01783 Ribosomal L32p protein family LF543_RS02955 PF02096 60Kd inner membrane protein LF543_RS02960 PF00708 Acylphosphatase LF543_RS02965 PF00588 SpoU rRNA Methylase family LF543_RS02965 PF08032 RNA 2'-O ribose methyltransferase substrate binding LF543_RS02980 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LF543_RS02980 PF01409 tRNA synthetases class II core domain (F) LF543_RS02985 PF03483 B3/4 domain LF543_RS02985 PF01588 Putative tRNA binding domain LF543_RS02985 PF03147 Ferredoxin-fold anticodon binding domain LF543_RS02985 PF03484 tRNA synthetase B5 domain LF543_RS02985 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LF543_RS02990 PF02618 YceG-like family LF543_RS02995 PF00485 Phosphoribulokinase / Uridine kinase family LF543_RS03000 PF01272 Transcription elongation factor, GreA/GreB, C-term LF543_RS03000 PF03449 Transcription elongation factor, N-terminal LF543_RS03010 PF00905 Penicillin binding protein transpeptidase domain LF543_RS03010 PF03717 Penicillin-binding Protein dimerisation domain LF543_RS03015 PF00471 Ribosomal protein L33 LF543_RS03020 PF01812 5-formyltetrahydrofolate cyclo-ligase family LF543_RS03025 PF01694 Rhomboid family LF543_RS03035 PF00480 ROK family LF543_RS03065 PF00829 Ribosomal prokaryotic L21 protein LF543_RS03075 PF01016 Ribosomal L27 protein LF543_RS03080 PF09285 Elongation factor P, C-terminal LF543_RS03080 PF08207 Elongation factor P (EF-P) KOW-like domain LF543_RS03080 PF01132 Elongation factor P (EF-P) OB domain LF543_RS03085 PF03780 Asp23 family, cell envelope-related function LF543_RS03090 PF01029 NusB family LF543_RS03095 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LF543_RS03095 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LF543_RS03100 PF02601 Exonuclease VII, large subunit LF543_RS03100 PF13742 OB-fold nucleic acid binding domain LF543_RS03105 PF02609 Exonuclease VII small subunit LF543_RS03110 PF00348 Polyprenyl synthetase LF543_RS03115 PF01479 S4 domain LF543_RS03115 PF01728 FtsJ-like methyltransferase LF543_RS03120 PF02463 RecF/RecN/SMC N terminal domain LF543_RS03125 PF00625 Guanylate kinase LF543_RS03130 PF01192 RNA polymerase Rpb6 LF543_RS03135 PF02441 Flavoprotein LF543_RS03135 PF04127 DNA / pantothenate metabolism flavoprotein LF543_RS03140 PF00271 Helicase conserved C-terminal domain LF543_RS03140 PF18074 Primosomal protein N C-terminal domain LF543_RS03140 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LF543_RS03140 PF04851 Type III restriction enzyme, res subunit LF543_RS03140 PF17764 3′ DNA-binding domain (3′BD) LF543_RS03145 PF02911 Formyl transferase, C-terminal domain LF543_RS03145 PF00551 Formyl transferase LF543_RS03155 PF16745 RsgA N-terminal domain LF543_RS03155 PF03193 RsgA GTPase LF543_RS03160 PF00834 Ribulose-phosphate 3 epimerase family LF543_RS03170 PF00830 Ribosomal L28 family LF543_RS03175 PF03780 Asp23 family, cell envelope-related function LF543_RS03180 PF13684 Dihydroxyacetone kinase family LF543_RS03180 PF02734 DAK2 domain LF543_RS03185 PF17191 RecG wedge domain LF543_RS03185 PF00271 Helicase conserved C-terminal domain LF543_RS03185 PF00270 DEAD/DEAH box helicase LF543_RS03190 PF02504 Fatty acid synthesis protein LF543_RS03195 PF00550 Phosphopantetheine attachment site LF543_RS03200 PF14622 Ribonuclease-III-like LF543_RS03200 PF00035 Double-stranded RNA binding motif LF543_RS03205 PF06470 SMC proteins Flexible Hinge Domain LF543_RS03205 PF02463 RecF/RecN/SMC N terminal domain LF543_RS03210 PF00448 SRP54-type protein, GTPase domain LF543_RS03210 PF02881 SRP54-type protein, helical bundle domain LF543_RS03215 PF04297 Putative helix-turn-helix protein, YlxM / p13 like LF543_RS03220 PF02881 SRP54-type protein, helical bundle domain LF543_RS03220 PF02978 Signal peptide binding domain LF543_RS03220 PF00448 SRP54-type protein, GTPase domain LF543_RS03225 PF00886 Ribosomal protein S16 LF543_RS03235 PF05239 PRC-barrel domain LF543_RS03235 PF01782 RimM N-terminal domain LF543_RS03240 PF01746 tRNA (Guanine-1)-methyltransferase LF543_RS03245 PF01245 Ribosomal protein L19 LF543_RS03250 PF13520 Amino acid permease LF543_RS03255 PF03577 Peptidase family C69 LF543_RS03260 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LF543_RS03260 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LF543_RS03265 PF17126 RsmF rRNA methyltransferase first C-terminal domain LF543_RS03265 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF LF543_RS03265 PF01189 16S rRNA methyltransferase RsmB/F LF543_RS03270 PF01070 FMN-dependent dehydrogenase LF543_RS03275 PF08544 GHMP kinases C terminal LF543_RS03275 PF00288 GHMP kinases N terminal domain LF543_RS03285 PF00288 GHMP kinases N terminal domain LF543_RS03285 PF08544 GHMP kinases C terminal LF543_RS03290 PF04851 Type III restriction enzyme, res subunit LF543_RS03290 PF00929 Exonuclease LF543_RS03290 PF13307 Helicase C-terminal domain LF543_RS03305 PF00912 Transglycosylase LF543_RS03305 PF00905 Penicillin binding protein transpeptidase domain LF543_RS03310 PF03838 Recombination protein U LF543_RS03315 PF06908 YspA SLOG family LF543_RS03320 PF05103 DivIVA protein LF543_RS03330 PF02926 THUMP domain LF543_RS03330 PF01170 Putative RNA methylase family UPF0020 LF543_RS03335 PF01266 FAD dependent oxidoreductase LF543_RS03340 PF13456 Reverse transcriptase-like LF543_RS03350 PF01268 Formate--tetrahydrofolate ligase LF543_RS03355 PF01252 Signal peptidase (SPase) II LF543_RS03360 PF01479 S4 domain LF543_RS03360 PF00849 RNA pseudouridylate synthase LF543_RS03365 PF00156 Phosphoribosyl transferase domain LF543_RS03370 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LF543_RS03370 PF00117 Glutamine amidotransferase class-I LF543_RS03375 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LF543_RS03375 PF02142 MGS-like domain LF543_RS03375 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LF543_RS03380 PF05670 NFACT protein RNA binding domain LF543_RS03390 PF02645 Uncharacterised protein, DegV family COG1307 LF543_RS03395 PF12822 ECF transporter, substrate-specific component LF543_RS03410 PF01625 Peptide methionine sulfoxide reductase LF543_RS03415 PF01641 SelR domain LF543_RS03420 PF01368 DHH family LF543_RS03420 PF02833 DHHA2 domain LF543_RS03425 PF03466 LysR substrate binding domain LF543_RS03425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LF543_RS03430 PF00521 DNA gyrase/topoisomerase IV, subunit A LF543_RS03430 PF03989 DNA gyrase C-terminal domain, beta-propeller LF543_RS03435 PF01751 Toprim domain LF543_RS03435 PF00204 DNA gyrase B LF543_RS03435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LF543_RS03435 PF00986 DNA gyrase B subunit, carboxyl terminus LF543_RS03440 PF02660 Glycerol-3-phosphate acyltransferase LF543_RS03450 PF00004 ATPase family associated with various cellular activities (AAA) LF543_RS03450 PF10431 C-terminal, D2-small domain, of ClpB protein LF543_RS03450 PF07724 AAA domain (Cdc48 subfamily) LF543_RS03455 PF00227 Proteasome subunit LF543_RS03460 PF02899 Phage integrase, N-terminal SAM-like domain LF543_RS03460 PF00589 Phage integrase family LF543_RS03465 PF01131 DNA topoisomerase LF543_RS03465 PF01751 Toprim domain LF543_RS03465 PF01396 Topoisomerase DNA binding C4 zinc finger LF543_RS03470 PF02481 DNA recombination-mediator protein A LF543_RS03475 PF01351 Ribonuclease HII LF543_RS03480 PF01926 50S ribosome-binding GTPase LF543_RS03485 PF06855 YozE SAM-like fold LF543_RS03490 PF00186 Dihydrofolate reductase LF543_RS03495 PF00303 Thymidylate synthase LF543_RS03500 PF12848 ABC transporter LF543_RS03500 PF00005 ABC transporter LF543_RS03500 PF16326 ABC transporter C-terminal domain LF543_RS03505 PF12627 Probable RNA and SrmB- binding site of polymerase A LF543_RS03505 PF01743 Poly A polymerase head domain LF543_RS03505 PF13735 tRNA nucleotidyltransferase domain 2 putative LF543_RS03520 PF00216 Bacterial DNA-binding protein LF543_RS03525 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LF543_RS03525 PF01926 50S ribosome-binding GTPase LF543_RS03530 PF00575 S1 RNA binding domain LF543_RS03535 PF02224 Cytidylate kinase LF543_RS03545 PF00270 DEAD/DEAH box helicase LF543_RS03545 PF00271 Helicase conserved C-terminal domain LF543_RS03555 PF12822 ECF transporter, substrate-specific component LF543_RS03560 PF01479 S4 domain LF543_RS03560 PF00849 RNA pseudouridylate synthase LF543_RS03565 PF04079 Segregation and condensation complex subunit ScpB LF543_RS03570 PF02616 Segregation and condensation protein ScpA LF543_RS03580 PF02899 Phage integrase, N-terminal SAM-like domain LF543_RS03580 PF00589 Phage integrase family LF543_RS03585 PF13509 S1 domain LF543_RS03585 PF17783 CvfB-like winged helix domain LF543_RS03590 PF02887 Pyruvate kinase, alpha/beta domain LF543_RS03590 PF00391 PEP-utilising enzyme, mobile domain LF543_RS03590 PF00224 Pyruvate kinase, barrel domain LF543_RS03595 PF07733 Bacterial DNA polymerase III alpha NTPase domain LF543_RS03595 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LF543_RS03595 PF01336 OB-fold nucleic acid binding domain LF543_RS03595 PF14579 Helix-hairpin-helix motif LF543_RS03595 PF02811 PHP domain LF543_RS03605 PF01546 Peptidase family M20/M25/M40 LF543_RS03605 PF07687 Peptidase dimerisation domain LF543_RS03610 PF01784 NIF3 (NGG1p interacting factor 3) LF543_RS03615 PF04816 tRNA (adenine(22)-N(1))-methyltransferase LF543_RS03620 PF00140 Sigma-70 factor, region 1.2 LF543_RS03620 PF04539 Sigma-70 region 3 LF543_RS03620 PF04542 Sigma-70 region 2 LF543_RS03620 PF04545 Sigma-70, region 4 LF543_RS03620 PF03979 Sigma-70 factor, region 1.1 LF543_RS03625 PF08275 DNA primase catalytic core, N-terminal domain LF543_RS03625 PF10410 DnaB-helicase binding domain of primase LF543_RS03625 PF01807 CHC2 zinc finger LF543_RS03630 PF02092 Glycyl-tRNA synthetase beta subunit LF543_RS03635 PF02091 Glycyl-tRNA synthetase alpha subunit LF543_RS03640 PF02565 Recombination protein O C terminal LF543_RS03640 PF11967 Recombination protein O N terminal LF543_RS03645 PF01926 50S ribosome-binding GTPase LF543_RS03645 PF07650 KH domain LF543_RS03655 PF02130 Uncharacterized protein family UPF0054 LF543_RS03660 PF02562 PhoH-like protein LF543_RS03665 PF09424 Yqey-like protein LF543_RS03670 PF01165 Ribosomal protein S21 LF543_RS03675 PF03618 Kinase/pyrophosphorylase LF543_RS03680 PF01261 Xylose isomerase-like TIM barrel LF543_RS03685 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase LF543_RS03690 PF01061 ABC-2 type transporter LF543_RS03695 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase LF543_RS03700 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LF543_RS03700 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LF543_RS03705 PF00152 tRNA synthetases class II (D, K and N) LF543_RS03705 PF01336 OB-fold nucleic acid binding domain LF543_RS03705 PF02938 GAD domain LF543_RS03710 PF01520 N-acetylmuramoyl-L-alanine amidase LF543_RS03710 PF08239 Bacterial SH3 domain LF543_RS03715 PF03881 Fructosamine kinase LF543_RS03725 PF02580 D-Tyr-tRNA(Tyr) deacylase LF543_RS03730 PF13291 ACT domain LF543_RS03730 PF04607 Region found in RelA / SpoT proteins LF543_RS03730 PF02824 TGS domain LF543_RS03735 PF04452 RNA methyltransferase LF543_RS03765 PF00817 impB/mucB/samB family LF543_RS03765 PF11798 IMS family HHH motif LF543_RS03765 PF11799 impB/mucB/samB family C-terminal domain LF543_RS03795 PF00679 Elongation factor G C-terminus LF543_RS03795 PF00009 Elongation factor Tu GTP binding domain LF543_RS03795 PF03144 Elongation factor Tu domain 2 LF543_RS03795 PF06421 GTP-binding protein LepA C-terminus LF543_RS03800 PF00226 DnaJ domain LF543_RS03800 PF01556 DnaJ C terminal domain LF543_RS03800 PF00684 DnaJ central domain LF543_RS03805 PF00012 Hsp70 protein LF543_RS03810 PF01025 GrpE LF543_RS03815 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding LF543_RS03815 PF01628 HrcA protein C terminal domain LF543_RS03820 PF06574 FAD synthetase LF543_RS03820 PF01687 Riboflavin kinase LF543_RS03825 PF16198 tRNA pseudouridylate synthase B C-terminal domain LF543_RS03825 PF01509 TruB family pseudouridylate synthase (N terminal domain) LF543_RS03830 PF02033 Ribosome-binding factor A LF543_RS03835 PF04760 Translation initiation factor IF-2, N-terminal region LF543_RS03835 PF11987 Translation-initiation factor 2 LF543_RS03835 PF00009 Elongation factor Tu GTP binding domain LF543_RS03840 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family LF543_RS03845 PF04296 Protein of unknown function (DUF448) LF543_RS03850 PF13184 NusA-like KH domain LF543_RS03850 PF08529 NusA N-terminal domain LF543_RS03850 PF00575 S1 RNA binding domain LF543_RS03855 PF17384 RimP C-terminal SH3 domain LF543_RS03855 PF02576 RimP N-terminal domain LF543_RS03860 PF14480 DNA polymerase III polC-type N-terminus I LF543_RS03860 PF00929 Exonuclease LF543_RS03860 PF02811 PHP domain LF543_RS03860 PF11490 DNA polymerase III polC-type N-terminus II LF543_RS03860 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LF543_RS03860 PF14579 Helix-hairpin-helix motif LF543_RS03860 PF07733 Bacterial DNA polymerase III alpha NTPase domain LF543_RS03865 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LF543_RS03865 PF03129 Anticodon binding domain LF543_RS03865 PF04073 Aminoacyl-tRNA editing domain LF543_RS03870 PF02163 Peptidase family M50 LF543_RS03870 PF17820 PDZ domain LF543_RS03880 PF01255 Putative undecaprenyl diphosphate synthase LF543_RS03890 PF01765 Ribosome recycling factor LF543_RS03895 PF00696 Amino acid kinase family LF543_RS03900 PF00889 Elongation factor TS LF543_RS03905 PF00318 Ribosomal protein S2 LF543_RS03915 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LF543_RS03915 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LF543_RS03920 PF01541 GIY-YIG catalytic domain LF543_RS03925 PF05175 Methyltransferase small domain LF543_RS03930 PF01553 Acyltransferase LF543_RS03935 PF03672 Uncharacterised protein family (UPF0154) LF543_RS03940 PF05979 Bacterial protein of unknown function (DUF896) LF543_RS03950 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal LF543_RS03950 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal LF543_RS03955 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase LF543_RS03960 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase LF543_RS03960 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase LF543_RS03965 PF04223 Citrate lyase, alpha subunit (CitF) LF543_RS03970 PF03328 HpcH/HpaI aldolase/citrate lyase family LF543_RS03975 PF06857 Malonate decarboxylase delta subunit (MdcD) LF543_RS03980 PF08218 Citrate lyase ligase C-terminal domain LF543_RS03990 PF03949 Malic enzyme, NAD binding domain LF543_RS03990 PF00390 Malic enzyme, N-terminal domain LF543_RS04005 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LF543_RS04005 PF07992 Pyridine nucleotide-disulphide oxidoreductase LF543_RS04015 PF00717 Peptidase S24-like LF543_RS04015 PF01726 LexA DNA binding domain LF543_RS04020 PF07859 alpha/beta hydrolase fold LF543_RS04030 PF00156 Phosphoribosyl transferase domain LF543_RS04035 PF10141 Single-strand DNA-specific exonuclease, C terminal domain LF543_RS04035 PF17768 RecJ OB domain LF543_RS04035 PF02272 DHHA1 domain LF543_RS04035 PF01368 DHH family LF543_RS04045 PF00753 Metallo-beta-lactamase superfamily LF543_RS04055 PF01018 GTP1/OBG LF543_RS04055 PF09269 Domain of unknown function (DUF1967) LF543_RS04055 PF01926 50S ribosome-binding GTPase LF543_RS04060 PF02151 UvrB/uvrC motif LF543_RS04060 PF01541 GIY-YIG catalytic domain LF543_RS04060 PF08459 UvrC Helix-hairpin-helix N-terminal LF543_RS04065 PF01926 50S ribosome-binding GTPase LF543_RS04070 PF07724 AAA domain (Cdc48 subfamily) LF543_RS04070 PF06689 ClpX C4-type zinc finger LF543_RS04070 PF10431 C-terminal, D2-small domain, of ClpB protein LF543_RS04075 PF05698 Bacterial trigger factor protein (TF) C-terminus LF543_RS04075 PF05697 Bacterial trigger factor protein (TF) LF543_RS04075 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LF543_RS04080 PF00009 Elongation factor Tu GTP binding domain LF543_RS04080 PF03144 Elongation factor Tu domain 2 LF543_RS04080 PF03143 Elongation factor Tu C-terminal domain LF543_RS04090 PF00753 Metallo-beta-lactamase superfamily LF543_RS04090 PF17770 Ribonuclease J C-terminal domain LF543_RS04090 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LF543_RS04095 PF00312 Ribosomal protein S15 LF543_RS04100 PF01649 Ribosomal protein S20 LF543_RS04105 PF06144 DNA polymerase III, delta subunit LF543_RS04110 PF03772 Competence protein LF543_RS04110 PF13567 Domain of unknown function (DUF4131) LF543_RS04110 PF00753 Metallo-beta-lactamase superfamily LF543_RS04115 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LF543_RS04120 PF10531 SLBB domain LF543_RS04125 PF13180 PDZ domain LF543_RS04125 PF05362 Lon protease (S16) C-terminal proteolytic domain LF543_RS04130 PF01467 Cytidylyltransferase-like LF543_RS04140 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) LF543_RS04145 PF01098 Cell cycle protein LF543_RS04150 PF00679 Elongation factor G C-terminus LF543_RS04150 PF14492 Elongation Factor G, domain II LF543_RS04150 PF00009 Elongation factor Tu GTP binding domain LF543_RS04150 PF03144 Elongation factor Tu domain 2 LF543_RS04155 PF00459 Inositol monophosphatase family LF543_RS04160 PF05256 Uncharacterised protein family (UPF0223) LF543_RS04165 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LF543_RS04165 PF00056 lactate/malate dehydrogenase, NAD binding domain LF543_RS04170 PF01327 Polypeptide deformylase LF543_RS04180 PF07288 Protein of unknown function (DUF1447) LF543_RS04185 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LF543_RS04185 PF00753 Metallo-beta-lactamase superfamily LF543_RS04185 PF17770 Ribonuclease J C-terminal domain LF543_RS04190 PF00248 Aldo/keto reductase family LF543_RS04195 PF14572 Phosphoribosyl synthetase-associated domain LF543_RS04195 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LF543_RS04200 PF14490 Helix-hairpin-helix containing domain LF543_RS04200 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain LF543_RS04200 PF13538 UvrD-like helicase C-terminal domain LF543_RS04210 PF00300 Histidine phosphatase superfamily (branch 1) LF543_RS04225 PF00266 Aminotransferase class-V LF543_RS04230 PF01048 Phosphorylase superfamily LF543_RS04245 PF00313 'Cold-shock' DNA-binding domain LF543_RS04250 PF00133 tRNA synthetases class I (I, L, M and V) LF543_RS04250 PF08264 Anticodon-binding domain of tRNA LF543_RS04250 PF06827 Zinc finger found in FPG and IleRS LF543_RS04255 PF05103 DivIVA protein LF543_RS04270 PF04472 Cell division protein SepF LF543_RS04275 PF12327 FtsZ family, C-terminal domain LF543_RS04275 PF00091 Tubulin/FtsZ family, GTPase domain LF543_RS04280 PF11983 Membrane-attachment and polymerisation-promoting switch LF543_RS04280 PF02491 SHS2 domain inserted in FTSA LF543_RS04285 PF03799 Cell division protein FtsQ LF543_RS04285 PF08478 POTRA domain, FtsQ-type LF543_RS04290 PF04101 Glycosyltransferase family 28 C-terminal domain LF543_RS04290 PF03033 Glycosyltransferase family 28 N-terminal domain LF543_RS04295 PF08245 Mur ligase middle domain LF543_RS04295 PF02875 Mur ligase family, glutamate ligase domain LF543_RS04300 PF00953 Glycosyl transferase family 4 LF543_RS04300 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LF543_RS04305 PF03793 PASTA domain LF543_RS04305 PF03717 Penicillin-binding Protein dimerisation domain LF543_RS04305 PF00905 Penicillin binding protein transpeptidase domain LF543_RS04315 PF01795 MraW methylase family LF543_RS04320 PF02381 MraZ protein, putative antitoxin-like LF543_RS04335 PF09397 Ftsk gamma domain LF543_RS04335 PF01580 FtsK/SpoIIIE family LF543_RS04335 PF17854 FtsK alpha domain LF543_RS04340 PF00588 SpoU rRNA Methylase family LF543_RS04355 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LF543_RS04355 PF13457 GW (Gly-Tryp) dipeptide domain LF543_RS04360 PF00849 RNA pseudouridylate synthase LF543_RS04365 PF01513 ATP-NAD kinase LF543_RS04370 PF04607 Region found in RelA / SpoT proteins LF543_RS04380 PF00248 Aldo/keto reductase family LF543_RS04385 PF08439 Oligopeptidase F LF543_RS04385 PF01432 Peptidase family M3 LF543_RS04395 PF05389 Negative regulator of genetic competence (MecA) LF543_RS04400 PF12706 Beta-lactamase superfamily domain LF543_RS04520 PF09335 SNARE associated Golgi protein LF543_RS04530 PF13344 Haloacid dehalogenase-like hydrolase LF543_RS04535 PF06265 Protein of unknown function (DUF1027) LF543_RS04540 PF02872 5'-nucleotidase, C-terminal domain LF543_RS04545 PF00324 Amino acid permease LF543_RS04550 PF00871 Acetokinase family LF543_RS04555 PF02384 N-6 DNA Methylase LF543_RS04570 PF07963 Prokaryotic N-terminal methylation motif LF543_RS04585 PF00437 Type II/IV secretion system protein LF543_RS04590 PF01709 Transcriptional regulator LF543_RS04595 PF00356 Bacterial regulatory proteins, lacI family LF543_RS04610 PF00924 Mechanosensitive ion channel LF543_RS04615 PF01725 Ham1 family LF543_RS04620 PF01177 Asp/Glu/Hydantoin racemase LF543_RS04625 PF10702 Protein of unknown function (DUF2507) LF543_RS04630 PF00085 Thioredoxin LF543_RS04635 PF01713 Smr domain LF543_RS04635 PF00488 MutS domain V LF543_RS04650 PF06949 Protein of unknown function (DUF1292) LF543_RS04655 PF03652 Holliday junction resolvase LF543_RS04660 PF06135 IreB regulatory phosphoprotein LF543_RS04665 PF02272 DHHA1 domain LF543_RS04665 PF01411 tRNA synthetases class II (A) LF543_RS04665 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LF543_RS04670 PF00271 Helicase conserved C-terminal domain LF543_RS04670 PF00270 DEAD/DEAH box helicase LF543_RS04675 PF01368 DHH family LF543_RS04675 PF02272 DHHA1 domain LF543_RS04680 PF00817 impB/mucB/samB family LF543_RS04680 PF11799 impB/mucB/samB family C-terminal domain LF543_RS04685 PF02699 Preprotein translocase subunit LF543_RS04690 PF05491 RuvB C-terminal winged helix domain LF543_RS04690 PF17864 RuvB AAA lid domain LF543_RS04690 PF05496 Holliday junction DNA helicase RuvB P-loop domain LF543_RS04695 PF01330 RuvA N terminal domain LF543_RS04695 PF07499 RuvA, C-terminal domain LF543_RS04700 PF01119 DNA mismatch repair protein, C-terminal domain LF543_RS04700 PF08676 MutL C terminal dimerisation domain LF543_RS04705 PF01624 MutS domain I LF543_RS04705 PF00488 MutS domain V LF543_RS04705 PF05188 MutS domain II LF543_RS04705 PF05190 MutS family domain IV LF543_RS04705 PF05192 MutS domain III LF543_RS04710 PF13277 YmdB-like protein LF543_RS04715 PF01966 HD domain LF543_RS04715 PF12072 Domain of unknown function (DUF3552) LF543_RS04715 PF00013 KH domain LF543_RS04720 PF02464 Competence-damaged protein LF543_RS04720 PF00994 Probable molybdopterin binding domain LF543_RS04720 PF18146 Damage-inducible protein CinA KH domain LF543_RS04725 PF01066 CDP-alcohol phosphatidyltransferase LF543_RS04730 PF13464 Domain of unknown function (DUF4115) LF543_RS04735 PF00675 Insulinase (Peptidase family M16) LF543_RS04735 PF05193 Peptidase M16 inactive domain LF543_RS04745 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LF543_RS04750 PF03775 Septum formation inhibitor MinC, C-terminal domain LF543_RS04760 PF04085 rod shape-determining protein MreC LF543_RS04770 PF08245 Mur ligase middle domain LF543_RS04770 PF02875 Mur ligase family, glutamate ligase domain LF543_RS04775 PF08264 Anticodon-binding domain of tRNA LF543_RS04775 PF00133 tRNA synthetases class I (I, L, M and V) LF543_RS04775 PF10458 Valyl tRNA synthetase tRNA binding arm LF543_RS04780 PF02568 Thiamine biosynthesis protein (ThiI) LF543_RS04780 PF02926 THUMP domain LF543_RS04785 PF00266 Aminotransferase class-V LF543_RS04790 PF06160 Septation ring formation regulator, EzrA LF543_RS04795 PF01479 S4 domain LF543_RS04795 PF00163 Ribosomal protein S4/S9 N-terminal domain LF543_RS04805 PF12002 MgsA AAA+ ATPase C terminal LF543_RS04805 PF05496 Holliday junction DNA helicase RuvB P-loop domain LF543_RS04805 PF16193 AAA C-terminal domain LF543_RS04810 PF00582 Universal stress protein family LF543_RS04825 PF07478 D-ala D-ala ligase C-terminus LF543_RS04825 PF01820 D-ala D-ala ligase N-terminus LF543_RS04830 PF01098 Cell cycle protein LF543_RS04840 PF01809 Putative membrane protein insertion efficiency factor LF543_RS04850 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LF543_RS04860 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LF543_RS04860 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LF543_RS04865 PF02874 ATP synthase alpha/beta family, beta-barrel domain LF543_RS04865 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LF543_RS04870 PF00231 ATP synthase LF543_RS04875 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LF543_RS04875 PF02874 ATP synthase alpha/beta family, beta-barrel domain LF543_RS04875 PF00306 ATP synthase alpha/beta chain, C terminal domain LF543_RS04880 PF00213 ATP synthase delta (OSCP) subunit LF543_RS04885 PF00430 ATP synthase B/B' CF(0) LF543_RS04890 PF00137 ATP synthase subunit C LF543_RS04895 PF00119 ATP synthase A chain LF543_RS04905 PF00464 Serine hydroxymethyltransferase LF543_RS04910 PF01300 Telomere recombination LF543_RS04910 PF03481 Putative GTP-binding controlling metal-binding LF543_RS04915 PF17827 PrmC N-terminal domain LF543_RS04915 PF05175 Methyltransferase small domain LF543_RS04920 PF00472 RF-1 domain LF543_RS04920 PF03462 PCRF domain LF543_RS04925 PF00265 Thymidine kinase LF543_RS04930 PF08245 Mur ligase middle domain LF543_RS04930 PF08353 Domain of unknown function (DUF1727) LF543_RS04935 PF07685 CobB/CobQ-like glutamine amidotransferase domain LF543_RS04945 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain LF543_RS04945 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal LF543_RS04945 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LF543_RS04950 PF00144 Beta-lactamase LF543_RS04955 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family LF543_RS04975 PF00226 DnaJ domain LF543_RS04975 PF01556 DnaJ C terminal domain LF543_RS04975 PF00684 DnaJ central domain LF543_RS04980 PF00877 NlpC/P60 family LF543_RS04980 PF08239 Bacterial SH3 domain LF543_RS04980 PF01476 LysM domain LF543_RS04990 PF00342 Phosphoglucose isomerase LF543_RS04995 PF17785 PUA-like domain LF543_RS04995 PF10672 S-adenosylmethionine-dependent methyltransferase LF543_RS05015 PF00877 NlpC/P60 family LF543_RS05015 PF08239 Bacterial SH3 domain LF543_RS05015 PF01476 LysM domain LF543_RS05020 PF07690 Major Facilitator Superfamily LF543_RS05025 PF00152 tRNA synthetases class II (D, K and N) LF543_RS05025 PF01336 OB-fold nucleic acid binding domain LF543_RS05045 PF13673 Acetyltransferase (GNAT) domain LF543_RS05050 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LF543_RS05050 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LF543_RS05055 PF07992 Pyridine nucleotide-disulphide oxidoreductase LF543_RS05055 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LF543_RS05065 PF01022 Bacterial regulatory protein, arsR family LF543_RS05080 PF10282 Lactonase, 7-bladed beta-propeller LF543_RS05090 PF00005 ABC transporter LF543_RS05095 PF01380 SIS domain LF543_RS05100 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LF543_RS05100 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LF543_RS05100 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LF543_RS05100 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LF543_RS05110 PF02457 DisA bacterial checkpoint controller nucleotide-binding LF543_RS05120 PF00999 Sodium/hydrogen exchanger family LF543_RS05125 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LF543_RS05125 PF01565 FAD binding domain LF543_RS05130 PF03372 Endonuclease/Exonuclease/phosphatase family LF543_RS05135 PF11490 DNA polymerase III polC-type N-terminus II LF543_RS05135 PF07733 Bacterial DNA polymerase III alpha NTPase domain LF543_RS05135 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LF543_RS05135 PF14579 Helix-hairpin-helix motif LF543_RS05135 PF02811 PHP domain LF543_RS05135 PF00929 Exonuclease LF543_RS05145 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LF543_RS05150 PF01515 Phosphate acetyl/butaryl transferase LF543_RS05155 PF03167 Uracil DNA glycosylase superfamily LF543_RS05160 PF01668 SmpB protein LF543_RS05165 PF00575 S1 RNA binding domain LF543_RS05165 PF17876 Cold shock domain LF543_RS05165 PF08206 Ribonuclease B OB domain LF543_RS05165 PF00773 RNB domain LF543_RS05170 PF03840 Preprotein translocase SecG subunit LF543_RS05180 PF03952 Enolase, N-terminal domain LF543_RS05180 PF00113 Enolase, C-terminal TIM barrel domain LF543_RS05185 PF00121 Triosephosphate isomerase LF543_RS05190 PF00162 Phosphoglycerate kinase LF543_RS05195 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LF543_RS05195 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LF543_RS05205 PF01381 Helix-turn-helix LF543_RS05210 PF13537 Glutamine amidotransferase domain LF543_RS05210 PF00733 Asparagine synthase LF543_RS05215 PF00574 Clp protease LF543_RS05220 PF02650 WhiA C-terminal HTH domain LF543_RS05220 PF14527 WhiA LAGLIDADG-like domain LF543_RS05220 PF10298 WhiA N-terminal LAGLIDADG-like domain LF543_RS05225 PF01933 Uncharacterised protein family UPF0052 LF543_RS05230 PF03668 P-loop ATPase protein family LF543_RS05235 PF18419 ATP-grasp-like domain LF543_RS05235 PF04262 Glutamate-cysteine ligase LF543_RS05235 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LF543_RS05240 PF10282 Lactonase, 7-bladed beta-propeller LF543_RS05255 PF17760 UvrA interaction domain LF543_RS05255 PF00005 ABC transporter LF543_RS05255 PF17755 UvrA DNA-binding domain LF543_RS05260 PF00271 Helicase conserved C-terminal domain LF543_RS05260 PF12344 Ultra-violet resistance protein B LF543_RS05260 PF02151 UvrB/uvrC motif LF543_RS05260 PF04851 Type III restriction enzyme, res subunit LF543_RS05260 PF17757 UvrB interaction domain LF543_RS05265 PF07992 Pyridine nucleotide-disulphide oxidoreductase LF543_RS05275 PF00483 Nucleotidyl transferase LF543_RS05280 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LF543_RS05280 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LF543_RS05285 PF01790 Prolipoprotein diacylglyceryl transferase LF543_RS05290 PF07475 HPr Serine kinase C-terminal domain LF543_RS05290 PF02603 HPr Serine kinase N terminus LF543_RS05295 PF17820 PDZ domain LF543_RS05305 PF01043 SecA preprotein cross-linking domain LF543_RS05305 PF07516 SecA Wing and Scaffold domain LF543_RS05305 PF07517 SecA DEAD-like domain LF543_RS05310 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LF543_RS05310 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus LF543_RS05320 PF04851 Type III restriction enzyme, res subunit LF543_RS05320 PF00271 Helicase conserved C-terminal domain LF543_RS05325 PF09186 Domain of unknown function (DUF1949) LF543_RS05325 PF01205 Uncharacterized protein family UPF0029 LF543_RS05330 PF00953 Glycosyl transferase family 4 LF543_RS05335 PF03788 LrgA family LF543_RS05340 PF04172 LrgB-like family LF543_RS05345 PF01979 Amidohydrolase family LF543_RS05345 PF13382 Adenine deaminase C-terminal domain LF543_RS05350 PF13520 Amino acid permease LF543_RS05355 PF00118 TCP-1/cpn60 chaperonin family LF543_RS05360 PF00166 Chaperonin 10 Kd subunit LF543_RS05365 PF02629 CoA binding domain LF543_RS05365 PF06971 Putative DNA-binding protein N-terminus LF543_RS05370 PF00814 Glycoprotease family LF543_RS05380 PF00814 Glycoprotease family LF543_RS05390 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LF543_RS05395 PF06156 Initiation control protein YabA LF543_RS05400 PF09115 DNA polymerase III, delta subunit, C terminal LF543_RS05405 PF06153 Cyclic-di-AMP receptor LF543_RS05410 PF02223 Thymidylate kinase LF543_RS05420 PF02132 RecR protein LF543_RS05420 PF13662 Toprim domain LF543_RS05425 PF02575 YbaB/EbfC DNA-binding family LF543_RS05430 PF12169 DNA polymerase III subunits gamma and tau domain III LF543_RS05440 PF14437 MafB19-like deaminase LF543_RS05445 PF05175 Methyltransferase small domain LF543_RS05450 PF00462 Glutaredoxin LF543_RS05455 PF02867 Ribonucleotide reductase, barrel domain LF543_RS05455 PF00317 Ribonucleotide reductase, all-alpha domain LF543_RS05455 PF08343 Ribonucleotide reductase N-terminal LF543_RS05460 PF00268 Ribonucleotide reductase, small chain LF543_RS05465 PF03706 Lysylphosphatidylglycerol synthase TM region LF543_RS05465 PF09924 Uncharacterised conserved protein (DUF2156) LF543_RS05470 PF16320 Ribosomal protein L7/L12 dimerisation domain LF543_RS05470 PF00542 Ribosomal protein L7/L12 C-terminal domain LF543_RS05475 PF00466 Ribosomal protein L10 LF543_RS05480 PF00687 Ribosomal protein L1p/L10e family LF543_RS05485 PF00298 Ribosomal protein L11, RNA binding domain LF543_RS05485 PF03946 Ribosomal protein L11, N-terminal domain LF543_RS05490 PF02357 Transcription termination factor nusG LF543_RS05490 PF00467 KOW motif LF543_RS05500 PF00471 Ribosomal protein L33 LF543_RS05510 PF00588 SpoU rRNA Methylase family LF543_RS05510 PF08032 RNA 2'-O ribose methyltransferase substrate binding LF543_RS05515 PF00636 Ribonuclease III domain LF543_RS05520 PF01406 tRNA synthetases class I (C) catalytic domain LF543_RS05520 PF09190 DALR domain LF543_RS05525 PF18073 Rubredoxin metal binding domain LF543_RS05530 PF00692 dUTPase LF543_RS05535 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LF543_RS05540 PF00300 Histidine phosphatase superfamily (branch 1) LF543_RS05555 PF03816 Cell envelope-related transcriptional attenuator domain LF543_RS05560 PF06628 Catalase-related immune-responsive LF543_RS05560 PF00199 Catalase LF543_RS05570 PF08544 GHMP kinases C terminal LF543_RS05570 PF00288 GHMP kinases N terminal domain LF543_RS05575 PF10263 SprT-like family LF543_RS05575 PF17283 SprT-like zinc ribbon domain LF543_RS05580 PF09371 Tex-like protein N-terminal domain LF543_RS05580 PF16921 Tex protein YqgF-like domain LF543_RS05580 PF00575 S1 RNA binding domain LF543_RS05580 PF17674 HHH domain LF543_RS05585 PF02540 NAD synthase LF543_RS05590 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain LF543_RS05590 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LF543_RS05590 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LF543_RS05595 PF03808 Glycosyl transferase WecB/TagA/CpsF family LF543_RS05600 PF00392 Bacterial regulatory proteins, gntR family LF543_RS05600 PF07702 UTRA domain LF543_RS05615 PF00854 POT family LF543_RS05620 PF01741 Large-conductance mechanosensitive channel, MscL LF543_RS05625 PF00120 Glutamine synthetase, catalytic domain LF543_RS05625 PF03951 Glutamine synthetase, beta-Grasp domain LF543_RS05630 PF13411 MerR HTH family regulatory protein LF543_RS05670 PF00152 tRNA synthetases class II (D, K and N) LF543_RS05670 PF01336 OB-fold nucleic acid binding domain LF543_RS05675 PF01207 Dihydrouridine synthase (Dus) LF543_RS05680 PF01430 Hsp33 protein LF543_RS05685 PF00004 ATPase family associated with various cellular activities (AAA) LF543_RS05685 PF17862 AAA+ lid domain LF543_RS05685 PF06480 FtsH Extracellular LF543_RS05685 PF01434 Peptidase family M41 LF543_RS05690 PF00156 Phosphoribosyl transferase domain LF543_RS05695 PF11734 TilS substrate C-terminal domain LF543_RS05695 PF01171 PP-loop family LF543_RS05700 PF00575 S1 RNA binding domain LF543_RS05710 PF01479 S4 domain LF543_RS05715 PF01943 Polysaccharide biosynthesis protein LF543_RS05715 PF14667 Polysaccharide biosynthesis C-terminal domain LF543_RS05720 PF03461 TRCF domain LF543_RS05720 PF00271 Helicase conserved C-terminal domain LF543_RS05720 PF02559 CarD-like/TRCF domain LF543_RS05720 PF00270 DEAD/DEAH box helicase LF543_RS05720 PF17757 UvrB interaction domain LF543_RS05725 PF01195 Peptidyl-tRNA hydrolase LF543_RS05730 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LF543_RS05730 PF00056 lactate/malate dehydrogenase, NAD binding domain LF543_RS05740 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system LF543_RS05750 PF00842 Alanine racemase, C-terminal domain LF543_RS05750 PF01168 Alanine racemase, N-terminal domain LF543_RS05755 PF00270 DEAD/DEAH box helicase LF543_RS05755 PF00271 Helicase conserved C-terminal domain LF543_RS05760 PF08245 Mur ligase middle domain LF543_RS05760 PF01225 Mur ligase family, catalytic domain LF543_RS05760 PF02875 Mur ligase family, glutamate ligase domain LF543_RS05770 PF01451 Low molecular weight phosphotyrosine protein phosphatase LF543_RS05775 PF07690 Major Facilitator Superfamily LF543_RS05780 PF01197 Ribosomal protein L31 LF543_RS05785 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LF543_RS05790 PF00117 Glutamine amidotransferase class-I LF543_RS05790 PF06418 CTP synthase N-terminus LF543_RS05795 PF05066 HB1, ASXL, restriction endonuclease HTH domain LF543_RS05805 PF01966 HD domain LF543_RS05815 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LF543_RS05815 PF14572 Phosphoribosyl synthetase-associated domain LF543_RS05820 PF00483 Nucleotidyl transferase LF543_RS05820 PF00132 Bacterial transferase hexapeptide (six repeats) LF543_RS05825 PF09182 Bacterial purine repressor, N-terminal LF543_RS05825 PF00156 Phosphoribosyl transferase domain LF543_RS05830 PF00950 ABC 3 transport family LF543_RS05835 PF00005 ABC transporter LF543_RS05845 PF00398 Ribosomal RNA adenine dimethylase LF543_RS05850 PF01751 Toprim domain LF543_RS05850 PF13331 Domain of unknown function (DUF4093) LF543_RS05855 PF01026 TatD related DNase LF543_RS05860 PF01588 Putative tRNA binding domain LF543_RS05860 PF08264 Anticodon-binding domain of tRNA LF543_RS05860 PF09334 tRNA synthetases class I (M) LF543_RS05865 PF01904 Protein of unknown function DUF72 LF543_RS05870 PF02146 Sir2 family LF543_RS05880 PF00368 Hydroxymethylglutaryl-coenzyme A reductase LF543_RS05885 PF02541 Ppx/GppA phosphatase family LF543_RS05890 PF00579 tRNA synthetases class I (W and Y) LF543_RS05895 PF13538 UvrD-like helicase C-terminal domain LF543_RS05915 PF07690 Major Facilitator Superfamily LF543_RS05925 PF00300 Histidine phosphatase superfamily (branch 1) LF543_RS05930 PF01594 AI-2E family transporter LF543_RS05950 PF00768 D-alanyl-D-alanine carboxypeptidase LF543_RS05950 PF07943 Penicillin-binding protein 5, C-terminal domain LF543_RS05955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LF543_RS05955 PF00512 His Kinase A (phospho-acceptor) domain LF543_RS05960 PF00072 Response regulator receiver domain LF543_RS05960 PF00486 Transcriptional regulatory protein, C terminal LF543_RS05970 PF06071 Protein of unknown function (DUF933) LF543_RS05970 PF01926 50S ribosome-binding GTPase LF543_RS05975 PF06107 Bacterial protein of unknown function (DUF951) LF543_RS05980 PF02195 ParB-like nuclease domain LF543_RS05980 PF17762 HTH domain found in ParB protein LF543_RS05985 PF13614 AAA domain LF543_RS05990 PF02527 rRNA small subunit methyltransferase G LF543_RS05995 PF01156 Inosine-uridine preferring nucleoside hydrolase LF543_RS06000 PF01676 Metalloenzyme superfamily LF543_RS06035 PF07563 Protein of unknown function (DUF1541) LF543_RS06060 PF00486 Transcriptional regulatory protein, C terminal LF543_RS06060 PF00072 Response regulator receiver domain LF543_RS06065 PF12849 PBP superfamily domain LF543_RS06070 PF00528 Binding-protein-dependent transport system inner membrane component LF543_RS06075 PF00528 Binding-protein-dependent transport system inner membrane component LF543_RS06080 PF00005 ABC transporter LF543_RS06085 PF00005 ABC transporter LF543_RS06090 PF01895 PhoU domain LF543_RS06095 PF07722 Peptidase C26 LF543_RS06100 PF12704 MacB-like periplasmic core domain LF543_RS06100 PF02687 FtsX-like permease family LF543_RS06100 PF00005 ABC transporter LF543_RS06105 PF08240 Alcohol dehydrogenase GroES-like domain LF543_RS06105 PF00107 Zinc-binding dehydrogenase LF543_RS06115 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LF543_RS06115 PF00205 Thiamine pyrophosphate enzyme, central domain LF543_RS06115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LF543_RS06120 PF03649 Uncharacterised protein family (UPF0014) LF543_RS06125 PF00005 ABC transporter LF543_RS06130 PF05958 tRNA (Uracil-5-)-methyltransferase LF543_RS06130 PF01938 TRAM domain LF543_RS06140 PF06800 Sugar transport protein LF543_RS06145 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LF543_RS06145 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LF543_RS06155 PF13350 Tyrosine phosphatase family LF543_RS06160 PF00579 tRNA synthetases class I (W and Y) LF543_RS06160 PF01479 S4 domain LF543_RS06170 PF00085 Thioredoxin LF543_RS06175 PF03741 Integral membrane protein TerC family LF543_RS06180 PF13457 GW (Gly-Tryp) dipeptide domain LF543_RS06180 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LF543_RS06205 PF00300 Histidine phosphatase superfamily (branch 1) LF543_RS06210 PF00884 Sulfatase LF543_RS06220 PF01238 Phosphomannose isomerase type I LF543_RS06225 PF07992 Pyridine nucleotide-disulphide oxidoreductase LF543_RS06230 PF01156 Inosine-uridine preferring nucleoside hydrolase LF543_RS06240 PF03960 ArsC family LF543_RS06245 PF02872 5'-nucleotidase, C-terminal domain LF543_RS06245 PF00149 Calcineurin-like phosphoesterase LF543_RS06250 PF01966 HD domain LF543_RS06250 PF12072 Domain of unknown function (DUF3552) LF543_RS06250 PF00013 KH domain LF543_RS06275 PF00582 Universal stress protein family LF543_RS06280 PF01479 S4 domain LF543_RS06280 PF00849 RNA pseudouridylate synthase LF543_RS06285 PF09364 XFP N-terminal domain LF543_RS06285 PF09363 XFP C-terminal domain LF543_RS06285 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase LF543_RS06290 PF00749 tRNA synthetases class I (E and Q), catalytic domain LF543_RS06295 PF00392 Bacterial regulatory proteins, gntR family LF543_RS06295 PF07702 UTRA domain LF543_RS06300 PF01566 Natural resistance-associated macrophage protein LF543_RS06305 PF04073 Aminoacyl-tRNA editing domain LF543_RS06310 PF01966 HD domain LF543_RS06325 PF03949 Malic enzyme, NAD binding domain LF543_RS06325 PF00390 Malic enzyme, N-terminal domain LF543_RS06335 PF00465 Iron-containing alcohol dehydrogenase LF543_RS06335 PF00171 Aldehyde dehydrogenase family LF543_RS06345 PF00011 Hsp20/alpha crystallin family LF543_RS06350 PF00571 CBS domain LF543_RS06350 PF03471 Transporter associated domain LF543_RS06350 PF01595 Cyclin M transmembrane N-terminal domain LF543_RS06360 PF07972 NrdI Flavodoxin like LF543_RS06365 PF07992 Pyridine nucleotide-disulphide oxidoreductase LF543_RS06365 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LF543_RS06380 PF17760 UvrA interaction domain LF543_RS06380 PF00005 ABC transporter LF543_RS06380 PF17755 UvrA DNA-binding domain LF543_RS06385 PF07690 Major Facilitator Superfamily LF543_RS06390 PF02645 Uncharacterised protein, DegV family COG1307 LF543_RS06400 PF00248 Aldo/keto reductase family LF543_RS06405 PF00664 ABC transporter transmembrane region LF543_RS06405 PF00005 ABC transporter LF543_RS06410 PF13520 Amino acid permease LF543_RS06420 PF01638 HxlR-like helix-turn-helix LF543_RS06425 PF08240 Alcohol dehydrogenase GroES-like domain LF543_RS06425 PF00107 Zinc-binding dehydrogenase LF543_RS06430 PF02652 L-lactate permease LF543_RS06445 PF06736 Protein of unknown function (DUF1211) LF543_RS06490 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LF543_RS06490 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LF543_RS06495 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LF543_RS06495 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LF543_RS06500 PF07732 Multicopper oxidase LF543_RS06500 PF07731 Multicopper oxidase LF543_RS06510 PF07690 Major Facilitator Superfamily LF543_RS06515 PF00149 Calcineurin-like phosphoesterase LF543_RS06515 PF02872 5'-nucleotidase, C-terminal domain LF543_RS06520 PF00005 ABC transporter LF543_RS06525 PF00528 Binding-protein-dependent transport system inner membrane component LF543_RS06530 PF00206 Lyase LF543_RS06530 PF14698 Argininosuccinate lyase C-terminal LF543_RS06535 PF00764 Arginosuccinate synthase LF543_RS06540 PF13520 Amino acid permease LF543_RS06545 PF00202 Aminotransferase class-III LF543_RS06550 PF00375 Sodium:dicarboxylate symporter family LF543_RS06575 PF02803 Thiolase, C-terminal domain LF543_RS06575 PF00108 Thiolase, N-terminal domain LF543_RS06580 PF05525 Branched-chain amino acid transport protein LF543_RS06605 PF08924 Domain of unknown function (DUF1906) LF543_RS06605 PF01471 Putative peptidoglycan binding domain LF543_RS06620 PF06100 MCRA family LF543_RS06630 PF00154 recA bacterial DNA recombination protein LF543_RS06645 PF13361 UvrD-like helicase C-terminal domain LF543_RS06645 PF00580 UvrD/REP helicase N-terminal domain LF543_RS06645 PF12705 PD-(D/E)XK nuclease superfamily LF543_RS06650 PF12705 PD-(D/E)XK nuclease superfamily LF543_RS06660 PF00860 Permease family LF543_RS06665 PF00171 Aldehyde dehydrogenase family LF543_RS06670 PF13396 Phospholipase_D-nuclease N-terminal LF543_RS06670 PF13091 PLD-like domain LF543_RS06695 PF03051 Peptidase C1-like family LF543_RS06705 PF10502 Signal peptidase, peptidase S26 LF543_RS06710 PF07690 Major Facilitator Superfamily LF543_RS06720 PF00689 Cation transporting ATPase, C-terminus LF543_RS06720 PF00690 Cation transporter/ATPase, N-terminus LF543_RS06730 PF07690 Major Facilitator Superfamily LF543_RS06735 PF00440 Bacterial regulatory proteins, tetR family LF543_RS06740 PF00106 short chain dehydrogenase LF543_RS06745 PF08240 Alcohol dehydrogenase GroES-like domain LF543_RS06745 PF00107 Zinc-binding dehydrogenase LF543_RS06760 PF08240 Alcohol dehydrogenase GroES-like domain LF543_RS06760 PF00107 Zinc-binding dehydrogenase LF543_RS06775 PF00909 Ammonium Transporter Family LF543_RS06780 PF00106 short chain dehydrogenase LF543_RS06785 PF00106 short chain dehydrogenase LF543_RS06800 PF02627 Carboxymuconolactone decarboxylase family LF543_RS06815 PF13411 MerR HTH family regulatory protein LF543_RS06820 PF00107 Zinc-binding dehydrogenase LF543_RS06820 PF08240 Alcohol dehydrogenase GroES-like domain LF543_RS06825 PF01370 NAD dependent epimerase/dehydratase family LF543_RS06830 PF00248 Aldo/keto reductase family LF543_RS06835 PF00583 Acetyltransferase (GNAT) family LF543_RS06845 PF01053 Cys/Met metabolism PLP-dependent enzyme LF543_RS06850 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LF543_RS06850 PF00056 lactate/malate dehydrogenase, NAD binding domain LF543_RS06880 PF00534 Glycosyl transferases group 1 LF543_RS06890 PF16929 Accessory Sec system GspB-transporter LF543_RS06900 PF16993 Accessory Sec system protein Asp1 LF543_RS06905 PF00344 SecY translocase LF543_RS06910 PF07517 SecA DEAD-like domain LF543_RS06910 PF01043 SecA preprotein cross-linking domain LF543_RS06910 PF07516 SecA Wing and Scaffold domain LF543_RS06915 PF07943 Penicillin-binding protein 5, C-terminal domain LF543_RS06915 PF00768 D-alanyl-D-alanine carboxypeptidase LF543_RS06925 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LF543_RS06925 PF13378 Enolase C-terminal domain-like LF543_RS06930 PF00528 Binding-protein-dependent transport system inner membrane component LF543_RS06935 PF00528 Binding-protein-dependent transport system inner membrane component LF543_RS06940 PF00005 ABC transporter LF543_RS06965 PF00294 pfkB family carbohydrate kinase LF543_RS06965 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LF543_RS06970 PF00480 ROK family LF543_RS06975 PF13932 GidA associated domain LF543_RS06975 PF01134 Glucose inhibited division protein A LF543_RS06980 PF01926 50S ribosome-binding GTPase LF543_RS06980 PF12631 MnmE helical domain LF543_RS06980 PF10396 GTP-binding protein TrmE N-terminus LF543_RS06990 PF02096 60Kd inner membrane protein LF543_RS06995 PF00825 Ribonuclease P LF543_RS07000 PF00468 Ribosomal protein L34