##gff-version 3
#!gff-spec-version 1.21
#!processor NCBI annotwriter
#!genome-build ASM22532v1
#!genome-build-accession NCBI_Assembly:GCF_000225325.1
#!annotation-date 08/20/2022 01:01:48
#!annotation-source NCBI RefSeq 
##sequence-region NC_015978.1 1 1298316
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=714313
NC_015978.1	RefSeq	region	1	1298316	.	+	.	ID=NC_015978.1:1..1298316;Dbxref=taxon:714313;Is_circular=true;Name=ANONYMOUS;gbkey=Src;genome=chromosome;mol_type=genomic DNA;old-name=Lactobacillus sanfranciscensis TMW 1.1304;strain=TMW 1.1304
NC_015978.1	RefSeq	gene	380	1729	.	+	.	ID=gene-LSA_RS00005;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=LSA_RS00005;old_locus_tag=LSA_00010
NC_015978.1	Protein Homology	CDS	380	1729	.	+	0	ID=cds-WP_041817481.1;Parent=gene-LSA_RS00005;Dbxref=Genbank:WP_041817481.1;Name=WP_041817481.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166403.1;locus_tag=LSA_RS00005;product=chromosomal replication initiator protein DnaA;protein_id=WP_041817481.1;transl_table=11
NC_015978.1	RefSeq	gene	1942	3081	.	+	.	ID=gene-LSA_RS00010;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=LSA_RS00010;old_locus_tag=LSA_00020
NC_015978.1	Protein Homology	CDS	1942	3081	.	+	0	ID=cds-WP_014081358.1;Parent=gene-LSA_RS00010;Dbxref=Genbank:WP_014081358.1;Name=WP_014081358.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003641629.1;locus_tag=LSA_RS00010;product=DNA polymerase III subunit beta;protein_id=WP_014081358.1;transl_table=11
NC_015978.1	RefSeq	gene	3255	3473	.	+	.	ID=gene-LSA_RS00015;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=LSA_RS00015;old_locus_tag=LSA_00030
NC_015978.1	Protein Homology	CDS	3255	3473	.	+	0	ID=cds-WP_041817482.1;Parent=gene-LSA_RS00015;Dbxref=Genbank:WP_041817482.1;Name=WP_041817482.1;Ontology_term=GO:0003723;gbkey=CDS;gene=yaaA;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010619021.1;locus_tag=LSA_RS00015;product=S4 domain-containing protein YaaA;protein_id=WP_041817482.1;transl_table=11
NC_015978.1	RefSeq	gene	3482	4594	.	+	.	ID=gene-LSA_RS00020;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=LSA_RS00020;old_locus_tag=LSA_00040
NC_015978.1	Protein Homology	CDS	3482	4594	.	+	0	ID=cds-WP_014081360.1;Parent=gene-LSA_RS00020;Dbxref=Genbank:WP_014081360.1;Name=WP_014081360.1;Ontology_term=GO:0006281,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014939031.1;locus_tag=LSA_RS00020;product=DNA replication/repair protein RecF;protein_id=WP_014081360.1;transl_table=11
NC_015978.1	RefSeq	gene	4615	6564	.	+	.	ID=gene-LSA_RS00025;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=LSA_RS00025;old_locus_tag=LSA_00050
NC_015978.1	Protein Homology	CDS	4615	6564	.	+	0	ID=cds-WP_014081361.1;Parent=gene-LSA_RS00025;Dbxref=Genbank:WP_014081361.1;Name=WP_014081361.1;Ontology_term=GO:0006265,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrB;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003637269.1;locus_tag=LSA_RS00025;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_014081361.1;transl_table=11
NC_015978.1	RefSeq	gene	6594	9116	.	+	.	ID=gene-LSA_RS00030;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=LSA_RS00030;old_locus_tag=LSA_00060
NC_015978.1	Protein Homology	CDS	6594	9116	.	+	0	ID=cds-WP_014081362.1;Parent=gene-LSA_RS00030;Dbxref=Genbank:WP_014081362.1;Name=WP_014081362.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003916,GO:0003918,GO:0005524;gbkey=CDS;gene=gyrA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008213425.1;locus_tag=LSA_RS00030;product=DNA gyrase subunit A;protein_id=WP_014081362.1;transl_table=11
NC_015978.1	RefSeq	gene	9313	9612	.	+	.	ID=gene-LSA_RS00035;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=LSA_RS00035;old_locus_tag=LSA_00070
NC_015978.1	Protein Homology	CDS	9313	9612	.	+	0	ID=cds-WP_014081363.1;Parent=gene-LSA_RS00035;Dbxref=Genbank:WP_014081363.1;Name=WP_014081363.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022191.1;locus_tag=LSA_RS00035;product=30S ribosomal protein S6;protein_id=WP_014081363.1;transl_table=11
NC_015978.1	RefSeq	gene	9641	10153	.	+	.	ID=gene-LSA_RS00040;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=LSA_RS00040;old_locus_tag=LSA_00080
NC_015978.1	Protein Homology	CDS	9641	10153	.	+	0	ID=cds-WP_014081364.1;Parent=gene-LSA_RS00040;Dbxref=Genbank:WP_014081364.1;Name=WP_014081364.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0006351,GO:0003697;gbkey=CDS;gene=ssb;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003219228.1;locus_tag=LSA_RS00040;product=single-stranded DNA-binding protein;protein_id=WP_014081364.1;transl_table=11
NC_015978.1	RefSeq	gene	10195	10452	.	+	.	ID=gene-LSA_RS00045;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=LSA_RS00045;old_locus_tag=LSA_00090
NC_015978.1	Protein Homology	CDS	10195	10452	.	+	0	ID=cds-WP_041817484.1;Parent=gene-LSA_RS00045;Dbxref=Genbank:WP_041817484.1;Name=WP_041817484.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004265822.1;locus_tag=LSA_RS00045;product=30S ribosomal protein S18;protein_id=WP_041817484.1;transl_table=11
NC_015978.1	RefSeq	gene	10565	12583	.	+	.	ID=gene-LSA_RS00050;Name=LSA_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00050;old_locus_tag=LSA_00100
NC_015978.1	Protein Homology	CDS	10565	12583	.	+	0	ID=cds-WP_014081366.1;Parent=gene-LSA_RS00050;Dbxref=Genbank:WP_014081366.1;Name=WP_014081366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011373727.1;locus_tag=LSA_RS00050;product=DHH family phosphoesterase;protein_id=WP_014081366.1;transl_table=11
NC_015978.1	RefSeq	gene	12614	13066	.	+	.	ID=gene-LSA_RS00055;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=LSA_RS00055;old_locus_tag=LSA_00110
NC_015978.1	Protein Homology	CDS	12614	13066	.	+	0	ID=cds-WP_014081367.1;Parent=gene-LSA_RS00055;Dbxref=Genbank:WP_014081367.1;Name=WP_014081367.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplI;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003637275.1;locus_tag=LSA_RS00055;product=50S ribosomal protein L9;protein_id=WP_014081367.1;transl_table=11
NC_015978.1	RefSeq	gene	13095	14528	.	+	.	ID=gene-LSA_RS00060;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=LSA_RS00060;old_locus_tag=LSA_00120
NC_015978.1	Protein Homology	CDS	13095	14528	.	+	0	ID=cds-WP_014081368.1;Parent=gene-LSA_RS00060;Dbxref=Genbank:WP_014081368.1;Name=WP_014081368.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=dnaB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003556669.1;locus_tag=LSA_RS00060;product=replicative DNA helicase;protein_id=WP_014081368.1;transl_table=11
NC_015978.1	RefSeq	gene	14636	15580	.	+	.	ID=gene-LSA_RS00065;Name=LSA_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00065;old_locus_tag=LSA_00130
NC_015978.1	Protein Homology	CDS	14636	15580	.	+	0	ID=cds-WP_014081369.1;Parent=gene-LSA_RS00065;Dbxref=Genbank:WP_014081369.1;Name=WP_014081369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166390.1;locus_tag=LSA_RS00065;product=DMT family transporter;protein_id=WP_014081369.1;transl_table=11
NC_015978.1	RefSeq	gene	15677	15749	.	-	.	ID=gene-LSA_RS00070;Name=LSA_RS00070;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS00070;old_locus_tag=LSA_R00010
NC_015978.1	tRNAscan-SE	tRNA	15677	15749	.	-	.	ID=rna-LSA_RS00070;Parent=gene-LSA_RS00070;anticodon=(pos:complement(15714..15716));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS00070;product=tRNA-Lys
NC_015978.1	tRNAscan-SE	exon	15677	15749	.	-	.	ID=exon-LSA_RS00070-1;Parent=rna-LSA_RS00070;anticodon=(pos:complement(15714..15716));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS00070;product=tRNA-Lys
NC_015978.1	RefSeq	gene	15958	16671	.	+	.	ID=gene-LSA_RS00075;Name=yycF;gbkey=Gene;gene=yycF;gene_biotype=protein_coding;locus_tag=LSA_RS00075;old_locus_tag=LSA_00140
NC_015978.1	Protein Homology	CDS	15958	16671	.	+	0	ID=cds-WP_180337718.1;Parent=gene-LSA_RS00075;Dbxref=Genbank:WP_180337718.1;Name=WP_180337718.1;gbkey=CDS;gene=yycF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005225282.1;locus_tag=LSA_RS00075;product=response regulator YycF;protein_id=WP_180337718.1;transl_table=11
NC_015978.1	RefSeq	gene	16695	18542	.	+	.	ID=gene-LSA_RS00080;Name=walK;gbkey=Gene;gene=walK;gene_biotype=protein_coding;locus_tag=LSA_RS00080;old_locus_tag=LSA_00150
NC_015978.1	Protein Homology	CDS	16695	18542	.	+	0	ID=cds-WP_014081371.1;Parent=gene-LSA_RS00080;Dbxref=Genbank:WP_014081371.1;Name=WP_014081371.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016021;gbkey=CDS;gene=walK;go_component=integral component of membrane|0016021||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167285.1;locus_tag=LSA_RS00080;product=cell wall metabolism sensor histidine kinase WalK;protein_id=WP_014081371.1;transl_table=11
NC_015978.1	RefSeq	gene	18526	19845	.	+	.	ID=gene-LSA_RS00085;Name=yycH;gbkey=Gene;gene=yycH;gene_biotype=protein_coding;locus_tag=LSA_RS00085;old_locus_tag=LSA_00160
NC_015978.1	Protein Homology	CDS	18526	19845	.	+	0	ID=cds-WP_103434676.1;Parent=gene-LSA_RS00085;Dbxref=Genbank:WP_103434676.1;Name=WP_103434676.1;gbkey=CDS;gene=yycH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167286.1;locus_tag=LSA_RS00085;product=two-component system activity regulator YycH;protein_id=WP_103434676.1;transl_table=11
NC_015978.1	RefSeq	gene	19835	20695	.	+	.	ID=gene-LSA_RS00090;Name=LSA_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00090;old_locus_tag=LSA_00170
NC_015978.1	Protein Homology	CDS	19835	20695	.	+	0	ID=cds-WP_041817485.1;Parent=gene-LSA_RS00090;Dbxref=Genbank:WP_041817485.1;Name=WP_041817485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167287.1;locus_tag=LSA_RS00090;product=two-component system regulatory protein YycI;protein_id=WP_041817485.1;transl_table=11
NC_015978.1	RefSeq	gene	20688	21491	.	+	.	ID=gene-LSA_RS00095;Name=LSA_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00095;old_locus_tag=LSA_00180
NC_015978.1	Protein Homology	CDS	20688	21491	.	+	0	ID=cds-WP_014081374.1;Parent=gene-LSA_RS00095;Dbxref=Genbank:WP_014081374.1;Name=WP_014081374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022207.1;locus_tag=LSA_RS00095;product=MBL fold metallo-hydrolase;protein_id=WP_014081374.1;transl_table=11
NC_015978.1	RefSeq	gene	22102	22581	.	+	.	ID=gene-LSA_RS00100;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=LSA_RS00100;old_locus_tag=LSA_00190
NC_015978.1	Protein Homology	CDS	22102	22581	.	+	0	ID=cds-WP_014081375.1;Parent=gene-LSA_RS00100;Dbxref=Genbank:WP_014081375.1;Name=WP_014081375.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003623831.1;locus_tag=LSA_RS00100;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_014081375.1;transl_table=11
NC_015978.1	RefSeq	gene	22622	23737	.	+	.	ID=gene-LSA_RS00105;Name=LSA_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00105;old_locus_tag=LSA_00200
NC_015978.1	Protein Homology	CDS	22622	23737	.	+	0	ID=cds-WP_103434675.1;Parent=gene-LSA_RS00105;Dbxref=Genbank:WP_103434675.1;Name=WP_103434675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167290.1;locus_tag=LSA_RS00105;product=YibE/F family protein;protein_id=WP_103434675.1;transl_table=11
NC_015978.1	RefSeq	gene	23734	24486	.	+	.	ID=gene-LSA_RS00110;Name=LSA_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00110;old_locus_tag=LSA_00210
NC_015978.1	Protein Homology	CDS	23734	24486	.	+	0	ID=cds-WP_041818002.1;Parent=gene-LSA_RS00110;Dbxref=Genbank:WP_041818002.1;Name=WP_041818002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022232.1;locus_tag=LSA_RS00110;product=YibE/F family protein;protein_id=WP_041818002.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	24602	26416	.	+	.	ID=gene-LSA_RS00115;Name=spxB;gbkey=Gene;gene=spxB;gene_biotype=pseudogene;locus_tag=LSA_RS00115;pseudo=true
NC_015978.1	Protein Homology	CDS	24602	26416	.	+	0	ID=cds-LSA_RS00115;Parent=gene-LSA_RS00115;Note=internal stop;Ontology_term=GO:0009444,GO:0047112;gbkey=CDS;gene=spxB;go_function=pyruvate oxidase activity|0047112||IEA;go_process=pyruvate oxidation|0009444||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167292.1;locus_tag=LSA_RS00115;product=pyruvate oxidase;pseudo=true;transl_table=11
NC_015978.1	RefSeq	gene	26474	27736	.	-	.	ID=gene-LSA_RS00120;Name=LSA_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00120;old_locus_tag=LSA_00240
NC_015978.1	GeneMarkS-2+	CDS	26474	27736	.	-	0	ID=cds-WP_041817486.1;Parent=gene-LSA_RS00120;Dbxref=Genbank:WP_041817486.1;Name=WP_041817486.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS00120;product=hypothetical protein;protein_id=WP_041817486.1;transl_table=11
NC_015978.1	RefSeq	gene	28088	28870	.	+	.	ID=gene-LSA_RS00125;Name=LSA_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00125;old_locus_tag=LSA_00250
NC_015978.1	Protein Homology	CDS	28088	28870	.	+	0	ID=cds-WP_014081379.1;Parent=gene-LSA_RS00125;Dbxref=Genbank:WP_014081379.1;Name=WP_014081379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167293.1;locus_tag=LSA_RS00125;product=sulfite exporter TauE/SafE family protein;protein_id=WP_014081379.1;transl_table=11
NC_015978.1	RefSeq	gene	29006	30019	.	+	.	ID=gene-LSA_RS00130;Name=LSA_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00130;old_locus_tag=LSA_00260
NC_015978.1	Protein Homology	CDS	29006	30019	.	+	0	ID=cds-WP_014081380.1;Parent=gene-LSA_RS00130;Dbxref=Genbank:WP_014081380.1;Name=WP_014081380.1;Ontology_term=GO:0044038,GO:0016755;gbkey=CDS;go_function=aminoacyltransferase activity|0016755||IEA;go_process=cell wall macromolecule biosynthetic process|0044038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009496187.1;locus_tag=LSA_RS00130;product=peptidoglycan bridge formation glycyltransferase FemA/FemB family protein;protein_id=WP_014081380.1;transl_table=11
NC_015978.1	RefSeq	gene	30061	31254	.	-	.	ID=gene-LSA_RS00135;Name=LSA_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00135;old_locus_tag=LSA_00270
NC_015978.1	Protein Homology	CDS	30061	31254	.	-	0	ID=cds-WP_014081381.1;Parent=gene-LSA_RS00135;Dbxref=Genbank:WP_014081381.1;Name=WP_014081381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022306.1;locus_tag=LSA_RS00135;product=MFS transporter;protein_id=WP_014081381.1;transl_table=11
NC_015978.1	RefSeq	gene	31862	32878	.	+	.	ID=gene-LSA_RS00140;Name=LSA_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00140;old_locus_tag=LSA_00280
NC_015978.1	Protein Homology	CDS	31862	32878	.	+	0	ID=cds-WP_014081382.1;Parent=gene-LSA_RS00140;Dbxref=Genbank:WP_014081382.1;Name=WP_014081382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002365359.1;locus_tag=LSA_RS00140;product=ABC transporter ATP-binding protein;protein_id=WP_014081382.1;transl_table=11
NC_015978.1	RefSeq	gene	32875	33843	.	+	.	ID=gene-LSA_RS00145;Name=LSA_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00145;old_locus_tag=LSA_00290
NC_015978.1	Protein Homology	CDS	32875	33843	.	+	0	ID=cds-WP_014081383.1;Parent=gene-LSA_RS00145;Dbxref=Genbank:WP_014081383.1;Name=WP_014081383.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017261435.1;locus_tag=LSA_RS00145;product=ATP-binding cassette domain-containing protein;protein_id=WP_014081383.1;transl_table=11
NC_015978.1	RefSeq	gene	33846	34805	.	+	.	ID=gene-LSA_RS00150;Name=LSA_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00150;old_locus_tag=LSA_00300
NC_015978.1	Protein Homology	CDS	33846	34805	.	+	0	ID=cds-WP_014081384.1;Parent=gene-LSA_RS00150;Dbxref=Genbank:WP_014081384.1;Name=WP_014081384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002354943.1;locus_tag=LSA_RS00150;product=ABC transporter permease;protein_id=WP_014081384.1;transl_table=11
NC_015978.1	RefSeq	gene	34821	35762	.	+	.	ID=gene-LSA_RS00155;Name=LSA_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00155;old_locus_tag=LSA_00310
NC_015978.1	Protein Homology	CDS	34821	35762	.	+	0	ID=cds-WP_041817487.1;Parent=gene-LSA_RS00155;Dbxref=Genbank:WP_041817487.1;Name=WP_041817487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011666976.1;locus_tag=LSA_RS00155;product=ABC transporter permease;protein_id=WP_041817487.1;transl_table=11
NC_015978.1	RefSeq	gene	35849	37636	.	+	.	ID=gene-LSA_RS00160;Name=LSA_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00160;old_locus_tag=LSA_00320
NC_015978.1	Protein Homology	CDS	35849	37636	.	+	0	ID=cds-WP_014081386.1;Parent=gene-LSA_RS00160;Dbxref=Genbank:WP_014081386.1;Name=WP_014081386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013728991.1;locus_tag=LSA_RS00160;product=oligopeptide ABC transporter substrate-binding protein;protein_id=WP_014081386.1;transl_table=11
NC_015978.1	RefSeq	gene	37784	40315	.	+	.	ID=gene-LSA_RS00165;Name=LSA_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00165;old_locus_tag=LSA_00330
NC_015978.1	Protein Homology	CDS	37784	40315	.	+	0	ID=cds-WP_014081387.1;Parent=gene-LSA_RS00165;Dbxref=Genbank:WP_014081387.1;Name=WP_014081387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003715629.1;locus_tag=LSA_RS00165;product=M1 family metallopeptidase;protein_id=WP_014081387.1;transl_table=11
NC_015978.1	RefSeq	gene	40696	42272	.	+	.	ID=gene-LSA_RS00170;Name=LSA_RS00170;gbkey=Gene;gene_biotype=rRNA;locus_tag=LSA_RS00170;old_locus_tag=LSA_R00020
NC_015978.1	cmsearch	rRNA	40696	42272	.	+	.	ID=rna-LSA_RS00170;Parent=gene-LSA_RS00170;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS00170;product=16S ribosomal RNA
NC_015978.1	cmsearch	exon	40696	42272	.	+	.	ID=exon-LSA_RS00170-1;Parent=rna-LSA_RS00170;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS00170;product=16S ribosomal RNA
NC_015978.1	RefSeq	gene	42494	45409	.	+	.	ID=gene-LSA_RS00175;Name=LSA_RS00175;gbkey=Gene;gene_biotype=rRNA;locus_tag=LSA_RS00175;old_locus_tag=LSA_R00030
NC_015978.1	cmsearch	rRNA	42494	45409	.	+	.	ID=rna-LSA_RS00175;Parent=gene-LSA_RS00175;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS00175;product=23S ribosomal RNA
NC_015978.1	cmsearch	exon	42494	45409	.	+	.	ID=exon-LSA_RS00175-1;Parent=rna-LSA_RS00175;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS00175;product=23S ribosomal RNA
NC_015978.1	RefSeq	gene	45493	45609	.	+	.	ID=gene-LSA_RS00180;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LSA_RS00180;old_locus_tag=LSA_R00040
NC_015978.1	cmsearch	rRNA	45493	45609	.	+	.	ID=rna-LSA_RS00180;Parent=gene-LSA_RS00180;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS00180;product=5S ribosomal RNA
NC_015978.1	cmsearch	exon	45493	45609	.	+	.	ID=exon-LSA_RS00180-1;Parent=rna-LSA_RS00180;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS00180;product=5S ribosomal RNA
NC_015978.1	RefSeq	gene	45746	47029	.	+	.	ID=gene-LSA_RS00185;Name=LSA_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00185;old_locus_tag=LSA_00340
NC_015978.1	Protein Homology	CDS	45746	47029	.	+	0	ID=cds-WP_041817488.1;Parent=gene-LSA_RS00185;Dbxref=Genbank:WP_041817488.1;Name=WP_041817488.1;Ontology_term=GO:0015293,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020090380.1;locus_tag=LSA_RS00185;product=cation:dicarboxylase symporter family transporter;protein_id=WP_041817488.1;transl_table=11
NC_015978.1	RefSeq	gene	47064	48617	.	-	.	ID=gene-LSA_RS00190;Name=LSA_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00190;old_locus_tag=LSA_00350
NC_015978.1	Protein Homology	CDS	47064	48617	.	-	0	ID=cds-WP_041817489.1;Parent=gene-LSA_RS00190;Dbxref=Genbank:WP_041817489.1;Name=WP_041817489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167080.1;locus_tag=LSA_RS00190;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_041817489.1;transl_table=11
NC_015978.1	RefSeq	gene	48601	49827	.	-	.	ID=gene-LSA_RS00195;Name=LSA_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00195;old_locus_tag=LSA_00360
NC_015978.1	Protein Homology	CDS	48601	49827	.	-	0	ID=cds-WP_049777560.1;Parent=gene-LSA_RS00195;Dbxref=Genbank:WP_049777560.1;Name=WP_049777560.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167079.1;locus_tag=LSA_RS00195;product=MFS transporter;protein_id=WP_049777560.1;transl_table=11
NC_015978.1	RefSeq	gene	50100	50291	.	+	.	ID=gene-LSA_RS07345;Name=LSA_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07345
NC_015978.1	GeneMarkS-2+	CDS	50100	50291	.	+	0	ID=cds-WP_081462379.1;Parent=gene-LSA_RS07345;Dbxref=Genbank:WP_081462379.1;Name=WP_081462379.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS07345;product=hypothetical protein;protein_id=WP_081462379.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	50322	50852	.	+	.	ID=gene-LSA_RS07165;Name=LSA_RS07165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS07165;old_locus_tag=LSA_00370;partial=true;pseudo=true;start_range=.,50322
NC_015978.1	Protein Homology	CDS	50322	50852	.	+	0	ID=cds-LSA_RS07165;Parent=gene-LSA_RS07165;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014035.2;locus_tag=LSA_RS07165;partial=true;product=sulfite exporter TauE/SafE family protein;pseudo=true;start_range=.,50322;transl_table=11
NC_015978.1	RefSeq	gene	50878	51060	.	+	.	ID=gene-LSA_RS00205;Name=LSA_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00205;old_locus_tag=LSA_00380
NC_015978.1	GeneMarkS-2+	CDS	50878	51060	.	+	0	ID=cds-WP_014081392.1;Parent=gene-LSA_RS00205;Dbxref=Genbank:WP_014081392.1;Name=WP_014081392.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS00205;product=hypothetical protein;protein_id=WP_014081392.1;transl_table=11
NC_015978.1	RefSeq	gene	51337	51657	.	-	.	ID=gene-LSA_RS00210;Name=LSA_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00210;old_locus_tag=LSA_00390
NC_015978.1	Protein Homology	CDS	51337	51657	.	-	0	ID=cds-WP_014081393.1;Parent=gene-LSA_RS00210;Dbxref=Genbank:WP_014081393.1;Name=WP_014081393.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016294.2;locus_tag=LSA_RS00210;product=DUF536 domain-containing protein;protein_id=WP_014081393.1;transl_table=11
NC_015978.1	RefSeq	gene	51893	52513	.	-	.	ID=gene-LSA_RS00215;Name=LSA_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00215;old_locus_tag=LSA_00400
NC_015978.1	Protein Homology	CDS	51893	52513	.	-	0	ID=cds-WP_049777563.1;Parent=gene-LSA_RS00215;Dbxref=Genbank:WP_049777563.1;Name=WP_049777563.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015679.2;locus_tag=LSA_RS00215;product=L%2CD-transpeptidase;protein_id=WP_049777563.1;transl_table=11
NC_015978.1	RefSeq	gene	52595	53185	.	-	.	ID=gene-LSA_RS00220;Name=LSA_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00220;old_locus_tag=LSA_00410
NC_015978.1	Protein Homology	CDS	52595	53185	.	-	0	ID=cds-WP_014081395.1;Parent=gene-LSA_RS00220;Dbxref=Genbank:WP_014081395.1;Name=WP_014081395.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015325.2;locus_tag=LSA_RS00220;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_014081395.1;transl_table=11
NC_015978.1	RefSeq	gene	53250	54224	.	-	.	ID=gene-LSA_RS00225;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=LSA_RS00225;old_locus_tag=LSA_00420
NC_015978.1	Protein Homology	CDS	53250	54224	.	-	0	ID=cds-WP_014081396.1;Parent=gene-LSA_RS00225;Dbxref=Genbank:WP_014081396.1;Name=WP_014081396.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008858225.1;locus_tag=LSA_RS00225;product=diaminopimelate epimerase;protein_id=WP_014081396.1;transl_table=11
NC_015978.1	RefSeq	gene	54239	55609	.	-	.	ID=gene-LSA_RS00230;Name=LSA_RS00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00230;old_locus_tag=LSA_00430
NC_015978.1	Protein Homology	CDS	54239	55609	.	-	0	ID=cds-WP_014081397.1;Parent=gene-LSA_RS00230;Dbxref=Genbank:WP_014081397.1;Name=WP_014081397.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010623386.1;locus_tag=LSA_RS00230;product=aspartate kinase;protein_id=WP_014081397.1;transl_table=11
NC_015978.1	cmsearch	riboswitch	55791	55963	.	+	.	ID=id-NC_015978.1:55791..55963;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
NC_015978.1	RefSeq	gene	56068	57366	.	+	.	ID=gene-LSA_RS00235;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=LSA_RS00235;old_locus_tag=LSA_00440
NC_015978.1	Protein Homology	CDS	56068	57366	.	+	0	ID=cds-WP_041817491.1;Parent=gene-LSA_RS00235;Dbxref=Genbank:WP_041817491.1;Name=WP_041817491.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022675.1;locus_tag=LSA_RS00235;product=diaminopimelate decarboxylase;protein_id=WP_041817491.1;transl_table=11
NC_015978.1	RefSeq	gene	57379	58086	.	+	.	ID=gene-LSA_RS00240;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=LSA_RS00240;old_locus_tag=LSA_00450
NC_015978.1	Protein Homology	CDS	57379	58086	.	+	0	ID=cds-WP_014081399.1;Parent=gene-LSA_RS00240;Dbxref=Genbank:WP_014081399.1;Name=WP_014081399.1;Ontology_term=GO:0009089,GO:0047200;gbkey=CDS;gene=dapD;go_function=tetrahydrodipicolinate N-acetyltransferase activity|0047200||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166826.1;locus_tag=LSA_RS00240;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-acetyltransferase;protein_id=WP_014081399.1;transl_table=11
NC_015978.1	RefSeq	gene	58092	59255	.	+	.	ID=gene-LSA_RS00245;Name=LSA_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00245;old_locus_tag=LSA_00460
NC_015978.1	Protein Homology	CDS	58092	59255	.	+	0	ID=cds-WP_041817492.1;Parent=gene-LSA_RS00245;Dbxref=Genbank:WP_041817492.1;Name=WP_041817492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008858219.1;locus_tag=LSA_RS00245;product=N-acetyldiaminopimelate deacetylase;protein_id=WP_041817492.1;transl_table=11
NC_015978.1	RefSeq	gene	59259	60143	.	+	.	ID=gene-LSA_RS00250;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=LSA_RS00250;old_locus_tag=LSA_00470
NC_015978.1	Protein Homology	CDS	59259	60143	.	+	0	ID=cds-WP_014081401.1;Parent=gene-LSA_RS00250;Dbxref=Genbank:WP_014081401.1;Name=WP_014081401.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010623390.1;locus_tag=LSA_RS00250;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_014081401.1;transl_table=11
NC_015978.1	RefSeq	gene	60136	60912	.	+	.	ID=gene-LSA_RS00255;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=LSA_RS00255;old_locus_tag=LSA_00480
NC_015978.1	Protein Homology	CDS	60136	60912	.	+	0	ID=cds-WP_014081402.1;Parent=gene-LSA_RS00255;Dbxref=Genbank:WP_014081402.1;Name=WP_014081402.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002880319.1;locus_tag=LSA_RS00255;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_014081402.1;transl_table=11
NC_015978.1	RefSeq	gene	60931	62010	.	+	.	ID=gene-LSA_RS00260;Name=LSA_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00260;old_locus_tag=LSA_00490
NC_015978.1	Protein Homology	CDS	60931	62010	.	+	0	ID=cds-WP_014081403.1;Parent=gene-LSA_RS00260;Dbxref=Genbank:WP_014081403.1;Name=WP_014081403.1;Ontology_term=GO:0008652,GO:0004073,GO:0016620,GO:0051287;gbkey=CDS;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NAD binding|0051287||IEA;go_process=cellular amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004047888.1;locus_tag=LSA_RS00260;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_014081403.1;transl_table=11
NC_015978.1	RefSeq	gene	62148	64025	.	+	.	ID=gene-LSA_RS00265;Name=LSA_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00265;old_locus_tag=LSA_00500
NC_015978.1	Protein Homology	CDS	62148	64025	.	+	0	ID=cds-WP_041817493.1;Parent=gene-LSA_RS00265;Dbxref=Genbank:WP_041817493.1;Name=WP_041817493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166456.1;locus_tag=LSA_RS00265;product=acetyltransferase;protein_id=WP_041817493.1;transl_table=11
NC_015978.1	RefSeq	gene	64238	66517	.	+	.	ID=gene-LSA_RS00270;Name=LSA_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00270;old_locus_tag=LSA_00510
NC_015978.1	Protein Homology	CDS	64238	66517	.	+	0	ID=cds-WP_014081405.1;Parent=gene-LSA_RS00270;Dbxref=Genbank:WP_014081405.1;Name=WP_014081405.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040237.1;locus_tag=LSA_RS00270;product=hypothetical protein;protein_id=WP_014081405.1;transl_table=11
NC_015978.1	RefSeq	gene	66471	67070	.	+	.	ID=gene-LSA_RS00275;Name=LSA_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00275;old_locus_tag=LSA_00520
NC_015978.1	Protein Homology	CDS	66471	67070	.	+	0	ID=cds-WP_014081406.1;Parent=gene-LSA_RS00275;Dbxref=Genbank:WP_014081406.1;Name=WP_014081406.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019202.2;locus_tag=LSA_RS00275;product=DUF1542 domain-containing protein;protein_id=WP_014081406.1;transl_table=11
NC_015978.1	RefSeq	gene	67291	67440	.	+	.	ID=gene-LSA_RS07350;Name=LSA_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07350
NC_015978.1	Protein Homology	CDS	67291	67440	.	+	0	ID=cds-WP_238979481.1;Parent=gene-LSA_RS07350;Dbxref=Genbank:WP_238979481.1;Name=WP_238979481.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013540.2;locus_tag=LSA_RS07350;product=hypothetical protein;protein_id=WP_238979481.1;transl_table=11
NC_015978.1	RefSeq	gene	67715	69118	.	+	.	ID=gene-LSA_RS00285;Name=LSA_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00285;old_locus_tag=LSA_00530
NC_015978.1	Protein Homology	CDS	67715	69118	.	+	0	ID=cds-WP_014081407.1;Parent=gene-LSA_RS00285;Dbxref=Genbank:WP_014081407.1;Name=WP_014081407.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017261422.1;locus_tag=LSA_RS00285;product=amino acid permease;protein_id=WP_014081407.1;transl_table=11
NC_015978.1	RefSeq	gene	69131	69571	.	+	.	ID=gene-LSA_RS00290;Name=LSA_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00290;old_locus_tag=LSA_00540
NC_015978.1	Protein Homology	CDS	69131	69571	.	+	0	ID=cds-WP_014081408.1;Parent=gene-LSA_RS00290;Dbxref=Genbank:WP_014081408.1;Name=WP_014081408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010490558.1;locus_tag=LSA_RS00290;product=ASCH domain-containing protein;protein_id=WP_014081408.1;transl_table=11
NC_015978.1	RefSeq	gene	69797	70705	.	+	.	ID=gene-LSA_RS00295;Name=LSA_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00295;old_locus_tag=LSA_00550
NC_015978.1	GeneMarkS-2+	CDS	69797	70705	.	+	0	ID=cds-WP_014081409.1;Parent=gene-LSA_RS00295;Dbxref=Genbank:WP_014081409.1;Name=WP_014081409.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS00295;product=hypothetical protein;protein_id=WP_014081409.1;transl_table=11
NC_015978.1	RefSeq	gene	70695	71378	.	+	.	ID=gene-LSA_RS00300;Name=LSA_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00300;old_locus_tag=LSA_00560
NC_015978.1	Protein Homology	CDS	70695	71378	.	+	0	ID=cds-WP_014081410.1;Parent=gene-LSA_RS00300;Dbxref=Genbank:WP_014081410.1;Name=WP_014081410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002368629.1;locus_tag=LSA_RS00300;product=ABC transporter ATP-binding protein;protein_id=WP_014081410.1;transl_table=11
NC_015978.1	RefSeq	gene	71368	72528	.	+	.	ID=gene-LSA_RS00305;Name=LSA_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00305;old_locus_tag=LSA_00570
NC_015978.1	Protein Homology	CDS	71368	72528	.	+	0	ID=cds-WP_041817494.1;Parent=gene-LSA_RS00305;Dbxref=Genbank:WP_041817494.1;Name=WP_041817494.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024116.2;locus_tag=LSA_RS00305;product=ABC transporter permease;protein_id=WP_041817494.1;transl_table=11
NC_015978.1	RefSeq	gene	72538	73011	.	+	.	ID=gene-LSA_RS00310;Name=LSA_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00310;old_locus_tag=LSA_00580
NC_015978.1	GeneMarkS-2+	CDS	72538	73011	.	+	0	ID=cds-WP_014081412.1;Parent=gene-LSA_RS00310;Dbxref=Genbank:WP_014081412.1;Name=WP_014081412.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS00310;product=hypothetical protein;protein_id=WP_014081412.1;transl_table=11
NC_015978.1	RefSeq	gene	73066	73791	.	-	.	ID=gene-LSA_RS00315;Name=LSA_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00315;old_locus_tag=LSA_00590
NC_015978.1	Protein Homology	CDS	73066	73791	.	-	0	ID=cds-WP_014081413.1;Parent=gene-LSA_RS00315;Dbxref=Genbank:WP_014081413.1;Name=WP_014081413.1;Note=Members of this family of hydrolases with an active site Cys residue belong to MEROPS family C26.;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166358.1;locus_tag=LSA_RS00315;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=WP_014081413.1;transl_table=11
NC_015978.1	cmsearch	binding_site	74008	74245	.	+	.	ID=id-NC_015978.1:74008..74245;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1
NC_015978.1	RefSeq	gene	74464	75825	.	+	.	ID=gene-LSA_RS00325;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=LSA_RS00325;old_locus_tag=LSA_00610
NC_015978.1	Protein Homology	CDS	74464	75825	.	+	0	ID=cds-WP_014081415.1;Parent=gene-LSA_RS00325;Dbxref=Genbank:WP_014081415.1;Name=WP_014081415.1;Ontology_term=GO:0015803,GO:0015658;gbkey=CDS;gene=brnQ;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014951552.1;locus_tag=LSA_RS00325;product=branched-chain amino acid transport system II carrier protein;protein_id=WP_014081415.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	75976	76325	.	+	.	ID=gene-LSA_RS07820;Name=LSA_RS07820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS07820;partial=true;pseudo=true;start_range=.,75976
NC_015978.1	Protein Homology	CDS	75976	76325	.	+	0	ID=cds-LSA_RS07820;Parent=gene-LSA_RS07820;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005917937.1;locus_tag=LSA_RS07820;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,75976;transl_table=11
NC_015978.1	RefSeq	pseudogene	76338	76696	.	+	.	ID=gene-LSA_RS00335;Name=LSA_RS00335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS00335;old_locus_tag=LSA_00640;pseudo=true
NC_015978.1	Protein Homology	CDS	76338	76696	.	+	0	ID=cds-LSA_RS00335;Parent=gene-LSA_RS00335;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002340715.1;locus_tag=LSA_RS00335;product=hypothetical protein;pseudo=true;transl_table=11
NC_015978.1	RefSeq	gene	76828	78207	.	-	.	ID=gene-LSA_RS00340;Name=LSA_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00340;old_locus_tag=LSA_00650
NC_015978.1	Protein Homology	CDS	76828	78207	.	-	0	ID=cds-WP_014081418.1;Parent=gene-LSA_RS00340;Dbxref=Genbank:WP_014081418.1;Name=WP_014081418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008857939.1;locus_tag=LSA_RS00340;product=amino acid permease;protein_id=WP_014081418.1;transl_table=11
NC_015978.1	RefSeq	gene	78420	79850	.	-	.	ID=gene-LSA_RS00345;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=LSA_RS00345;old_locus_tag=LSA_00660
NC_015978.1	Protein Homology	CDS	78420	79850	.	-	0	ID=cds-WP_014081419.1;Parent=gene-LSA_RS00345;Dbxref=Genbank:WP_014081419.1;Name=WP_014081419.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003681101.1;locus_tag=LSA_RS00345;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_014081419.1;transl_table=11
NC_015978.1	RefSeq	gene	79965	81446	.	-	.	ID=gene-LSA_RS00350;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=LSA_RS00350;old_locus_tag=LSA_00670
NC_015978.1	Protein Homology	CDS	79965	81446	.	-	0	ID=cds-WP_049777565.1;Parent=gene-LSA_RS00350;Dbxref=Genbank:WP_049777565.1;Name=WP_049777565.1;Ontology_term=GO:0006098,GO:0004345;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010023029.1;locus_tag=LSA_RS00350;product=glucose-6-phosphate dehydrogenase;protein_id=WP_049777565.1;transl_table=11
NC_015978.1	RefSeq	gene	81660	82436	.	+	.	ID=gene-LSA_RS00355;Name=LSA_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00355;old_locus_tag=LSA_00680
NC_015978.1	Protein Homology	CDS	81660	82436	.	+	0	ID=cds-WP_041817497.1;Parent=gene-LSA_RS00355;Dbxref=Genbank:WP_041817497.1;Name=WP_041817497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007124288.1;locus_tag=LSA_RS00355;product=pyrroline-5-carboxylate reductase;protein_id=WP_041817497.1;transl_table=11
NC_015978.1	RefSeq	gene	82429	82641	.	+	.	ID=gene-LSA_RS00360;Name=LSA_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00360;old_locus_tag=LSA_00690
NC_015978.1	GeneMarkS-2+	CDS	82429	82641	.	+	0	ID=cds-WP_014081422.1;Parent=gene-LSA_RS00360;Dbxref=Genbank:WP_014081422.1;Name=WP_014081422.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS00360;product=hypothetical protein;protein_id=WP_014081422.1;transl_table=11
NC_015978.1	RefSeq	gene	82736	84592	.	+	.	ID=gene-LSA_RS00365;Name=LSA_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00365;old_locus_tag=LSA_00700
NC_015978.1	Protein Homology	CDS	82736	84592	.	+	0	ID=cds-WP_041817499.1;Parent=gene-LSA_RS00365;Dbxref=Genbank:WP_041817499.1;Name=WP_041817499.1;Ontology_term=GO:0006812,GO:0055085,GO:0015299,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=solute:proton antiporter activity|0015299||IEA;go_process=cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016526976.1;locus_tag=LSA_RS00365;product=cation:proton antiporter;protein_id=WP_041817499.1;transl_table=11
NC_015978.1	RefSeq	gene	84808	85047	.	+	.	ID=gene-LSA_RS07800;Name=LSA_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07800;old_locus_tag=LSA_00710
NC_015978.1	Protein Homology	CDS	84808	85047	.	+	0	ID=cds-WP_014081424.1;Parent=gene-LSA_RS07800;Dbxref=Genbank:WP_014081424.1;Name=WP_014081424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009854526.1;locus_tag=LSA_RS07800;product=hypothetical protein;protein_id=WP_014081424.1;transl_table=11
NC_015978.1	RefSeq	gene	85034	85387	.	+	.	ID=gene-LSA_RS00375;Name=LSA_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00375;old_locus_tag=LSA_00720
NC_015978.1	Protein Homology	CDS	85034	85387	.	+	0	ID=cds-WP_014081425.1;Parent=gene-LSA_RS00375;Dbxref=Genbank:WP_014081425.1;Name=WP_014081425.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014505.2;locus_tag=LSA_RS00375;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_014081425.1;transl_table=11
NC_015978.1	RefSeq	gene	85459	87006	.	-	.	ID=gene-LSA_RS00380;Name=LSA_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00380;old_locus_tag=LSA_00730
NC_015978.1	Protein Homology	CDS	85459	87006	.	-	0	ID=cds-WP_014081426.1;Parent=gene-LSA_RS00380;Dbxref=Genbank:WP_014081426.1;Name=WP_014081426.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010690827.1;locus_tag=LSA_RS00380;product=multicopper oxidase domain-containing protein;protein_id=WP_014081426.1;transl_table=11
NC_015978.1	RefSeq	gene	87122	87268	.	+	.	ID=gene-LSA_RS07700;Name=LSA_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07700;old_locus_tag=LSA_00740
NC_015978.1	Protein Homology	CDS	87122	87268	.	+	0	ID=cds-WP_167534413.1;Parent=gene-LSA_RS07700;Dbxref=Genbank:WP_167534413.1;Name=WP_167534413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022242.1;locus_tag=LSA_RS07700;product=hypothetical protein;protein_id=WP_167534413.1;transl_table=11
NC_015978.1	RefSeq	gene	87338	88177	.	-	.	ID=gene-LSA_RS07170;Name=LSA_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07170;old_locus_tag=LSA_00750
NC_015978.1	Protein Homology	CDS	87338	88177	.	-	0	ID=cds-WP_049777566.1;Parent=gene-LSA_RS07170;Dbxref=Genbank:WP_049777566.1;Name=WP_049777566.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018196.2;locus_tag=LSA_RS07170;product=MucBP domain-containing protein;protein_id=WP_049777566.1;transl_table=11
NC_015978.1	RefSeq	gene	88297	88605	.	+	.	ID=gene-LSA_RS00390;Name=LSA_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00390;old_locus_tag=LSA_00760
NC_015978.1	GeneMarkS-2+	CDS	88297	88605	.	+	0	ID=cds-WP_014081428.1;Parent=gene-LSA_RS00390;Dbxref=Genbank:WP_014081428.1;Name=WP_014081428.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS00390;product=hypothetical protein;protein_id=WP_014081428.1;transl_table=11
NC_015978.1	RefSeq	gene	88626	89018	.	+	.	ID=gene-LSA_RS00395;Name=LSA_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00395;old_locus_tag=LSA_00770
NC_015978.1	Protein Homology	CDS	88626	89018	.	+	0	ID=cds-WP_144011127.1;Parent=gene-LSA_RS00395;Dbxref=Genbank:WP_144011127.1;Name=WP_144011127.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014566.2;locus_tag=LSA_RS00395;product=CPBP family intramembrane metalloprotease;protein_id=WP_144011127.1;transl_table=11
NC_015978.1	RefSeq	gene	89166	89726	.	-	.	ID=gene-LSA_RS00400;Name=LSA_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00400;old_locus_tag=LSA_00780
NC_015978.1	Protein Homology	CDS	89166	89726	.	-	0	ID=cds-WP_041817501.1;Parent=gene-LSA_RS00400;Dbxref=Genbank:WP_041817501.1;Name=WP_041817501.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167199.1;locus_tag=LSA_RS00400;product=ECF transporter S component;protein_id=WP_041817501.1;transl_table=11
NC_015978.1	cmsearch	riboswitch	89876	90008	.	-	.	ID=id-NC_015978.1:89876..90008;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
NC_015978.1	RefSeq	gene	90066	90386	.	-	.	ID=gene-LSA_RS00405;Name=LSA_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00405;old_locus_tag=LSA_00800
NC_015978.1	Protein Homology	CDS	90066	90386	.	-	0	ID=cds-WP_041817502.1;Parent=gene-LSA_RS00405;Dbxref=Genbank:WP_041817502.1;Name=WP_041817502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010011148.1;locus_tag=LSA_RS00405;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_041817502.1;transl_table=11
NC_015978.1	RefSeq	gene	90386	90796	.	-	.	ID=gene-LSA_RS00410;Name=LSA_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00410;old_locus_tag=LSA_00810
NC_015978.1	Protein Homology	CDS	90386	90796	.	-	0	ID=cds-WP_014081432.1;Parent=gene-LSA_RS00410;Dbxref=Genbank:WP_014081432.1;Name=WP_014081432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013728556.1;locus_tag=LSA_RS00410;product=cupin domain-containing protein;protein_id=WP_014081432.1;transl_table=11
NC_015978.1	RefSeq	gene	90801	91205	.	-	.	ID=gene-LSA_RS00415;Name=LSA_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00415;old_locus_tag=LSA_00820
NC_015978.1	Protein Homology	CDS	90801	91205	.	-	0	ID=cds-WP_014081433.1;Parent=gene-LSA_RS00415;Dbxref=Genbank:WP_014081433.1;Name=WP_014081433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022128.1;locus_tag=LSA_RS00415;product=MerR family transcriptional regulator;protein_id=WP_014081433.1;transl_table=11
NC_015978.1	RefSeq	gene	91334	91825	.	+	.	ID=gene-LSA_RS00420;Name=LSA_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00420;old_locus_tag=LSA_00830
NC_015978.1	Protein Homology	CDS	91334	91825	.	+	0	ID=cds-WP_014081434.1;Parent=gene-LSA_RS00420;Dbxref=Genbank:WP_014081434.1;Name=WP_014081434.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014909.2;locus_tag=LSA_RS00420;product=hypothetical protein;protein_id=WP_014081434.1;transl_table=11
NC_015978.1	RefSeq	gene	91838	92302	.	+	.	ID=gene-LSA_RS00425;Name=LSA_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00425;old_locus_tag=LSA_00840
NC_015978.1	Protein Homology	CDS	91838	92302	.	+	0	ID=cds-WP_014081435.1;Parent=gene-LSA_RS00425;Dbxref=Genbank:WP_014081435.1;Name=WP_014081435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003637371.1;locus_tag=LSA_RS00425;product=NUDIX hydrolase;protein_id=WP_014081435.1;transl_table=11
NC_015978.1	RefSeq	gene	92637	93458	.	+	.	ID=gene-LSA_RS00430;Name=LSA_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00430;old_locus_tag=LSA_00850
NC_015978.1	Protein Homology	CDS	92637	93458	.	+	0	ID=cds-WP_014081436.1;Parent=gene-LSA_RS00430;Dbxref=Genbank:WP_014081436.1;Name=WP_014081436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010771346.1;locus_tag=LSA_RS00430;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_014081436.1;transl_table=11
NC_015978.1	RefSeq	gene	93519	94517	.	-	.	ID=gene-LSA_RS00435;Name=LSA_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00435;old_locus_tag=LSA_00860
NC_015978.1	Protein Homology	CDS	93519	94517	.	-	0	ID=cds-WP_014081437.1;Parent=gene-LSA_RS00435;Dbxref=Genbank:WP_014081437.1;Name=WP_014081437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017262453.1;locus_tag=LSA_RS00435;product=D-2-hydroxyacid dehydrogenase;protein_id=WP_014081437.1;transl_table=11
NC_015978.1	RefSeq	gene	94517	95524	.	-	.	ID=gene-LSA_RS00440;Name=LSA_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00440;old_locus_tag=LSA_00870
NC_015978.1	Protein Homology	CDS	94517	95524	.	-	0	ID=cds-WP_014081438.1;Parent=gene-LSA_RS00440;Dbxref=Genbank:WP_014081438.1;Name=WP_014081438.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:NF012382.2;locus_tag=LSA_RS00440;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_014081438.1;transl_table=11
NC_015978.1	RefSeq	gene	95612	96121	.	+	.	ID=gene-LSA_RS00445;Name=LSA_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00445;old_locus_tag=LSA_00880
NC_015978.1	Protein Homology	CDS	95612	96121	.	+	0	ID=cds-WP_103434512.1;Parent=gene-LSA_RS00445;Dbxref=Genbank:WP_103434512.1;Name=WP_103434512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010008948.1;locus_tag=LSA_RS00445;product=GNAT family N-acetyltransferase;protein_id=WP_103434512.1;transl_table=11
NC_015978.1	RefSeq	gene	96123	96578	.	+	.	ID=gene-LSA_RS00450;Name=LSA_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00450;old_locus_tag=LSA_00890
NC_015978.1	Protein Homology	CDS	96123	96578	.	+	0	ID=cds-WP_014081440.1;Parent=gene-LSA_RS00450;Dbxref=Genbank:WP_014081440.1;Name=WP_014081440.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024854.2;locus_tag=LSA_RS00450;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_014081440.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	96624	97523	.	+	.	ID=gene-LSA_RS00455;Name=LSA_RS00455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS00455;pseudo=true
NC_015978.1	Protein Homology	CDS	96624	97523	.	+	0	ID=cds-LSA_RS00455;Parent=gene-LSA_RS00455;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005717114.1;locus_tag=LSA_RS00455;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11
NC_015978.1	RefSeq	gene	97524	99110	.	+	.	ID=gene-LSA_RS00460;Name=LSA_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00460;old_locus_tag=LSA_00920
NC_015978.1	GeneMarkS-2+	CDS	97524	99110	.	+	0	ID=cds-WP_014081441.1;Parent=gene-LSA_RS00460;Dbxref=Genbank:WP_014081441.1;Name=WP_014081441.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS00460;product=hypothetical protein;protein_id=WP_014081441.1;transl_table=11
NC_015978.1	RefSeq	gene	99171	100379	.	-	.	ID=gene-LSA_RS00465;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=LSA_RS00465;old_locus_tag=LSA_00930
NC_015978.1	Protein Homology	CDS	99171	100379	.	-	0	ID=cds-WP_014081442.1;Parent=gene-LSA_RS00465;Dbxref=Genbank:WP_014081442.1;Name=WP_014081442.1;Ontology_term=GO:0006508,GO:0045148;gbkey=CDS;gene=pepT;go_function=tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011475995.1;locus_tag=LSA_RS00465;product=peptidase T;protein_id=WP_014081442.1;transl_table=11
NC_015978.1	RefSeq	gene	100391	101239	.	-	.	ID=gene-LSA_RS00470;Name=LSA_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00470;old_locus_tag=LSA_00940
NC_015978.1	Protein Homology	CDS	100391	101239	.	-	0	ID=cds-WP_041817503.1;Parent=gene-LSA_RS00470;Dbxref=Genbank:WP_041817503.1;Name=WP_041817503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005729016.1;locus_tag=LSA_RS00470;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_041817503.1;transl_table=11
NC_015978.1	cmsearch	binding_site	101299	101551	.	-	.	ID=id-NC_015978.1:101299..101551;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1
NC_015978.1	RefSeq	gene	101662	102063	.	-	.	ID=gene-LSA_RS00475;Name=LSA_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00475;old_locus_tag=LSA_00950
NC_015978.1	Protein Homology	CDS	101662	102063	.	-	0	ID=cds-WP_014081444.1;Parent=gene-LSA_RS00475;Dbxref=Genbank:WP_014081444.1;Name=WP_014081444.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020397.2;locus_tag=LSA_RS00475;product=DUF1801 domain-containing protein;protein_id=WP_014081444.1;transl_table=11
NC_015978.1	RefSeq	gene	102156	102608	.	+	.	ID=gene-LSA_RS00480;Name=LSA_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00480;old_locus_tag=LSA_00960
NC_015978.1	Protein Homology	CDS	102156	102608	.	+	0	ID=cds-WP_014081445.1;Parent=gene-LSA_RS00480;Dbxref=Genbank:WP_014081445.1;Name=WP_014081445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014082299.1;locus_tag=LSA_RS00480;product=helix-turn-helix domain-containing protein;protein_id=WP_014081445.1;transl_table=11
NC_015978.1	RefSeq	gene	102891	103139	.	+	.	ID=gene-LSA_RS07175;Name=LSA_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07175;old_locus_tag=LSA_00970
NC_015978.1	GeneMarkS-2+	CDS	102891	103139	.	+	0	ID=cds-WP_049777567.1;Parent=gene-LSA_RS07175;Dbxref=Genbank:WP_049777567.1;Name=WP_049777567.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS07175;product=cytidine deaminase;protein_id=WP_049777567.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	103341	104116	.	-	.	ID=gene-LSA_RS07825;Name=LSA_RS07825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS07825;pseudo=true
NC_015978.1	Protein Homology	CDS	103341	104116	.	-	0	ID=cds-LSA_RS07825;Parent=gene-LSA_RS07825;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027313.2;locus_tag=LSA_RS07825;product=DUF4767 domain-containing protein;pseudo=true;transl_table=11
NC_015978.1	RefSeq	gene	104277	105629	.	+	.	ID=gene-LSA_RS00495;Name=LSA_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00495;old_locus_tag=LSA_00990
NC_015978.1	Protein Homology	CDS	104277	105629	.	+	0	ID=cds-WP_041817504.1;Parent=gene-LSA_RS00495;Dbxref=Genbank:WP_041817504.1;Name=WP_041817504.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022077.1;locus_tag=LSA_RS00495;product=cytosine permease;protein_id=WP_041817504.1;transl_table=11
NC_015978.1	cmsearch	riboswitch	105661	105749	.	+	.	ID=id-NC_015978.1:105661..105749;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
NC_015978.1	RefSeq	gene	105860	106414	.	+	.	ID=gene-LSA_RS00500;Name=LSA_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00500;old_locus_tag=LSA_01000
NC_015978.1	Protein Homology	CDS	105860	106414	.	+	0	ID=cds-WP_041817505.1;Parent=gene-LSA_RS00500;Dbxref=Genbank:WP_041817505.1;Name=WP_041817505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020089808.1;locus_tag=LSA_RS00500;product=ECF transporter S component;protein_id=WP_041817505.1;transl_table=11
NC_015978.1	RefSeq	gene	106638	107063	.	+	.	ID=gene-LSA_RS00505;Name=LSA_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00505;old_locus_tag=LSA_01010
NC_015978.1	Protein Homology	CDS	106638	107063	.	+	0	ID=cds-WP_014081448.1;Parent=gene-LSA_RS00505;Dbxref=Genbank:WP_014081448.1;Name=WP_014081448.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF038270.1;locus_tag=LSA_RS00505;product=Msa family membrane protein;protein_id=WP_014081448.1;transl_table=11
NC_015978.1	RefSeq	gene	107295	107792	.	+	.	ID=gene-LSA_RS07185;Name=LSA_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07185;old_locus_tag=LSA_01030
NC_015978.1	Protein Homology	CDS	107295	107792	.	+	0	ID=cds-WP_103468390.1;Parent=gene-LSA_RS07185;Dbxref=Genbank:WP_103468390.1;Name=WP_103468390.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014566.2;locus_tag=LSA_RS07185;product=CPBP family intramembrane metalloprotease;protein_id=WP_103468390.1;transl_table=11
NC_015978.1	RefSeq	gene	107828	108193	.	-	.	ID=gene-LSA_RS00520;Name=LSA_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00520;old_locus_tag=LSA_01040
NC_015978.1	Protein Homology	CDS	107828	108193	.	-	0	ID=cds-WP_014081451.1;Parent=gene-LSA_RS00520;Dbxref=Genbank:WP_014081451.1;Name=WP_014081451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010624487.1;locus_tag=LSA_RS00520;product=YisL family protein;protein_id=WP_014081451.1;transl_table=11
NC_015978.1	RefSeq	gene	108261	109151	.	-	.	ID=gene-LSA_RS00525;Name=LSA_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00525;old_locus_tag=LSA_01050
NC_015978.1	Protein Homology	CDS	108261	109151	.	-	0	ID=cds-WP_041817506.1;Parent=gene-LSA_RS00525;Dbxref=Genbank:WP_041817506.1;Name=WP_041817506.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010014928.1;locus_tag=LSA_RS00525;product=zinc ABC transporter substrate-binding protein;protein_id=WP_041817506.1;transl_table=11
NC_015978.1	RefSeq	gene	109266	109898	.	+	.	ID=gene-LSA_RS00530;Name=LSA_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00530;old_locus_tag=LSA_01060
NC_015978.1	Protein Homology	CDS	109266	109898	.	+	0	ID=cds-WP_014081453.1;Parent=gene-LSA_RS00530;Dbxref=Genbank:WP_014081453.1;Name=WP_014081453.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012655.2;locus_tag=LSA_RS00530;product=TetR/AcrR family transcriptional regulator;protein_id=WP_014081453.1;transl_table=11
NC_015978.1	RefSeq	gene	109956	110384	.	-	.	ID=gene-LSA_RS00535;Name=LSA_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00535;old_locus_tag=LSA_01070
NC_015978.1	GeneMarkS-2+	CDS	109956	110384	.	-	0	ID=cds-WP_014081454.1;Parent=gene-LSA_RS00535;Dbxref=Genbank:WP_014081454.1;Name=WP_014081454.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS00535;product=hypothetical protein;protein_id=WP_014081454.1;transl_table=11
NC_015978.1	RefSeq	gene	110394	111038	.	-	.	ID=gene-LSA_RS00540;Name=LSA_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00540;old_locus_tag=LSA_01080
NC_015978.1	Protein Homology	CDS	110394	111038	.	-	0	ID=cds-WP_014081455.1;Parent=gene-LSA_RS00540;Dbxref=Genbank:WP_014081455.1;Name=WP_014081455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016511214.1;locus_tag=LSA_RS00540;product=energy-coupling factor transporter transmembrane protein EcfT;protein_id=WP_014081455.1;transl_table=11
NC_015978.1	RefSeq	gene	111038	112435	.	-	.	ID=gene-LSA_RS00545;Name=LSA_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00545;old_locus_tag=LSA_01090
NC_015978.1	Protein Homology	CDS	111038	112435	.	-	0	ID=cds-WP_225361798.1;Parent=gene-LSA_RS00545;Dbxref=Genbank:WP_225361798.1;Name=WP_225361798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166449.1;locus_tag=LSA_RS00545;product=ATP-binding cassette domain-containing protein;protein_id=WP_225361798.1;transl_table=11
NC_015978.1	cmsearch	riboswitch	112498	112588	.	-	.	ID=id-NC_015978.1:112498..112588;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
NC_015978.1	RefSeq	pseudogene	112640	112819	.	-	.	ID=gene-LSA_RS07360;Name=LSA_RS07360;end_range=112819,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS07360;old_locus_tag=LSA_01100;partial=true;pseudo=true
NC_015978.1	Protein Homology	CDS	112640	112819	.	-	0	ID=cds-LSA_RS07360;Parent=gene-LSA_RS07360;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=112819,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013777.2;locus_tag=LSA_RS07360;partial=true;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11
NC_015978.1	RefSeq	gene	113261	113659	.	+	.	ID=gene-LSA_RS00555;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LSA_RS00555;old_locus_tag=LSA_01120
NC_015978.1	Protein Homology	CDS	113261	113659	.	+	0	ID=cds-WP_014081459.1;Parent=gene-LSA_RS00555;Dbxref=Genbank:WP_014081459.1;Name=WP_014081459.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000762755.1;locus_tag=LSA_RS00555;product=IS200/IS605 family transposase;protein_id=WP_014081459.1;transl_table=11
NC_015978.1	RefSeq	gene	113659	114834	.	+	.	ID=gene-LSA_RS00560;Name=LSA_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00560;old_locus_tag=LSA_01130
NC_015978.1	Protein Homology	CDS	113659	114834	.	+	0	ID=cds-WP_014081481.1;Parent=gene-LSA_RS00560;Dbxref=Genbank:WP_014081481.1;Name=WP_014081481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003664510.1;locus_tag=LSA_RS00560;product=RNA-guided endonuclease TnpB family protein;protein_id=WP_014081481.1;transl_table=11
NC_015978.1	RefSeq	gene	114988	115416	.	+	.	ID=gene-LSA_RS00565;Name=LSA_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00565;old_locus_tag=LSA_01140
NC_015978.1	Protein Homology	CDS	114988	115416	.	+	0	ID=cds-WP_014081461.1;Parent=gene-LSA_RS00565;Dbxref=Genbank:WP_014081461.1;Name=WP_014081461.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.2;locus_tag=LSA_RS00565;product=MFS transporter;protein_id=WP_014081461.1;transl_table=11
NC_015978.1	RefSeq	gene	115438	115752	.	+	.	ID=gene-LSA_RS00570;Name=LSA_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00570;old_locus_tag=LSA_01150
NC_015978.1	Protein Homology	CDS	115438	115752	.	+	0	ID=cds-WP_014081462.1;Parent=gene-LSA_RS00570;Dbxref=Genbank:WP_014081462.1;Name=WP_014081462.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013777.2;locus_tag=LSA_RS00570;product=helix-turn-helix transcriptional regulator;protein_id=WP_014081462.1;transl_table=11
NC_015978.1	RefSeq	gene	115818	116930	.	-	.	ID=gene-LSA_RS00575;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=LSA_RS00575;old_locus_tag=LSA_01160
NC_015978.1	Protein Homology	CDS	115818	116930	.	-	0	ID=cds-WP_014081463.1;Parent=gene-LSA_RS00575;Dbxref=Genbank:WP_014081463.1;Name=WP_014081463.1;Ontology_term=GO:0006281,GO:0006310,GO:0009432,GO:0003677,GO:0008094,GO:0005737;gbkey=CDS;gene=recA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: protein motif:HMM:TIGR02012.1;locus_tag=LSA_RS00575;product=recombinase RecA;protein_id=WP_014081463.1;transl_table=11
NC_015978.1	RefSeq	gene	117143	117850	.	+	.	ID=gene-LSA_RS00580;Name=LSA_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00580;old_locus_tag=LSA_01170
NC_015978.1	Protein Homology	CDS	117143	117850	.	+	0	ID=cds-WP_014081464.1;Parent=gene-LSA_RS00580;Dbxref=Genbank:WP_014081464.1;Name=WP_014081464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002326602.1;locus_tag=LSA_RS00580;product=AzlC family ABC transporter permease;protein_id=WP_014081464.1;transl_table=11
NC_015978.1	RefSeq	gene	117837	118163	.	+	.	ID=gene-LSA_RS00585;Name=LSA_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00585;old_locus_tag=LSA_01180
NC_015978.1	Protein Homology	CDS	117837	118163	.	+	0	ID=cds-WP_014081465.1;Parent=gene-LSA_RS00585;Dbxref=Genbank:WP_014081465.1;Name=WP_014081465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002287484.1;locus_tag=LSA_RS00585;product=AzlD domain-containing protein;protein_id=WP_014081465.1;transl_table=11
NC_015978.1	RefSeq	gene	118390	118914	.	-	.	ID=gene-LSA_RS00590;Name=LSA_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00590;old_locus_tag=LSA_01200
NC_015978.1	Protein Homology	CDS	118390	118914	.	-	0	ID=cds-WP_014081467.1;Parent=gene-LSA_RS00590;Dbxref=Genbank:WP_014081467.1;Name=WP_014081467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166462.1;locus_tag=LSA_RS00590;product=GNAT family N-acetyltransferase;protein_id=WP_014081467.1;transl_table=11
NC_015978.1	RefSeq	gene	119000	120178	.	-	.	ID=gene-LSA_RS00595;Name=LSA_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00595;old_locus_tag=LSA_01210
NC_015978.1	Protein Homology	CDS	119000	120178	.	-	0	ID=cds-WP_041817509.1;Parent=gene-LSA_RS00595;Dbxref=Genbank:WP_041817509.1;Name=WP_041817509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017260882.1;locus_tag=LSA_RS00595;product=thiolase family protein;protein_id=WP_041817509.1;transl_table=11
NC_015978.1	RefSeq	gene	120265	120810	.	+	.	ID=gene-LSA_RS00600;Name=LSA_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00600;old_locus_tag=LSA_01220
NC_015978.1	Protein Homology	CDS	120265	120810	.	+	0	ID=cds-WP_014081469.1;Parent=gene-LSA_RS00600;Dbxref=Genbank:WP_014081469.1;Name=WP_014081469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022052.1;locus_tag=LSA_RS00600;product=hypothetical protein;protein_id=WP_014081469.1;transl_table=11
NC_015978.1	RefSeq	gene	121120	122696	.	+	.	ID=gene-LSA_RS00605;Name=LSA_RS00605;gbkey=Gene;gene_biotype=rRNA;locus_tag=LSA_RS00605;old_locus_tag=LSA_R00050
NC_015978.1	cmsearch	rRNA	121120	122696	.	+	.	ID=rna-LSA_RS00605;Parent=gene-LSA_RS00605;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS00605;product=16S ribosomal RNA
NC_015978.1	cmsearch	exon	121120	122696	.	+	.	ID=exon-LSA_RS00605-1;Parent=rna-LSA_RS00605;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS00605;product=16S ribosomal RNA
NC_015978.1	RefSeq	gene	122764	122839	.	+	.	ID=gene-LSA_RS00610;Name=LSA_RS00610;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS00610;old_locus_tag=LSA_R00060
NC_015978.1	tRNAscan-SE	tRNA	122764	122839	.	+	.	ID=rna-LSA_RS00610;Parent=gene-LSA_RS00610;gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS00610;product=tRNA-OTHER
NC_015978.1	tRNAscan-SE	exon	122764	122839	.	+	.	ID=exon-LSA_RS00610-1;Parent=rna-LSA_RS00610;gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS00610;product=tRNA-OTHER
NC_015978.1	RefSeq	gene	123010	125925	.	+	.	ID=gene-LSA_RS00615;Name=LSA_RS00615;gbkey=Gene;gene_biotype=rRNA;locus_tag=LSA_RS00615;old_locus_tag=LSA_R00070
NC_015978.1	cmsearch	rRNA	123010	125925	.	+	.	ID=rna-LSA_RS00615;Parent=gene-LSA_RS00615;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS00615;product=23S ribosomal RNA
NC_015978.1	cmsearch	exon	123010	125925	.	+	.	ID=exon-LSA_RS00615-1;Parent=rna-LSA_RS00615;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS00615;product=23S ribosomal RNA
NC_015978.1	RefSeq	gene	126009	126125	.	+	.	ID=gene-LSA_RS00620;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LSA_RS00620;old_locus_tag=LSA_R00080
NC_015978.1	cmsearch	rRNA	126009	126125	.	+	.	ID=rna-LSA_RS00620;Parent=gene-LSA_RS00620;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS00620;product=5S ribosomal RNA
NC_015978.1	cmsearch	exon	126009	126125	.	+	.	ID=exon-LSA_RS00620-1;Parent=rna-LSA_RS00620;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS00620;product=5S ribosomal RNA
NC_015978.1	cmsearch	binding_site	126239	126500	.	+	.	ID=id-NC_015978.1:126239..126500;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1
NC_015978.1	RefSeq	pseudogene	126555	127730	.	+	.	ID=gene-LSA_RS00625;Name=LSA_RS00625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS00625;old_locus_tag=LSA_01240;pseudo=true
NC_015978.1	Protein Homology	CDS	126555	127730	.	+	0	ID=cds-LSA_RS00625;Parent=gene-LSA_RS00625;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003646431.1;locus_tag=LSA_RS00625;product=pyridoxal phosphate-dependent aminotransferase;pseudo=true;transl_table=11
NC_015978.1	RefSeq	gene	127743	128798	.	+	.	ID=gene-LSA_RS00630;Name=LSA_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00630;old_locus_tag=LSA_01250
NC_015978.1	Protein Homology	CDS	127743	128798	.	+	0	ID=cds-WP_014081472.1;Parent=gene-LSA_RS00630;Dbxref=Genbank:WP_014081472.1;Name=WP_014081472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166385.1;locus_tag=LSA_RS00630;product=methionine ABC transporter ATP-binding protein;protein_id=WP_014081472.1;transl_table=11
NC_015978.1	RefSeq	gene	128798	129502	.	+	.	ID=gene-LSA_RS00635;Name=LSA_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00635;old_locus_tag=LSA_01260
NC_015978.1	Protein Homology	CDS	128798	129502	.	+	0	ID=cds-WP_014081473.1;Parent=gene-LSA_RS00635;Dbxref=Genbank:WP_014081473.1;Name=WP_014081473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166386.1;locus_tag=LSA_RS00635;product=ABC transporter permease;protein_id=WP_014081473.1;transl_table=11
NC_015978.1	RefSeq	gene	129668	130129	.	+	.	ID=gene-LSA_RS00640;Name=LSA_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00640;old_locus_tag=LSA_01270
NC_015978.1	Protein Homology	CDS	129668	130129	.	+	0	ID=cds-WP_014081474.1;Parent=gene-LSA_RS00640;Dbxref=Genbank:WP_014081474.1;Name=WP_014081474.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024908.2;locus_tag=LSA_RS00640;product=helix-turn-helix domain-containing protein;protein_id=WP_014081474.1;transl_table=11
NC_015978.1	RefSeq	gene	130141	130989	.	+	.	ID=gene-LSA_RS00645;Name=LSA_RS00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00645;old_locus_tag=LSA_01280
NC_015978.1	Protein Homology	CDS	130141	130989	.	+	0	ID=cds-WP_258027358.1;Parent=gene-LSA_RS00645;Dbxref=Genbank:WP_258027358.1;Name=WP_258027358.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033516.0;locus_tag=LSA_RS00645;product=IS3 family transposase;protein_id=WP_258027358.1;transl_table=11
NC_015978.1	RefSeq	gene	131039	131557	.	-	.	ID=gene-LSA_RS00650;Name=LSA_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00650;old_locus_tag=LSA_01290
NC_015978.1	GeneMarkS-2+	CDS	131039	131557	.	-	0	ID=cds-WP_014081476.1;Parent=gene-LSA_RS00650;Dbxref=Genbank:WP_014081476.1;Name=WP_014081476.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS00650;product=hypothetical protein;protein_id=WP_014081476.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	131674	132606	.	-	.	ID=gene-LSA_RS00655;Name=LSA_RS00655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS00655;old_locus_tag=LSA_01310;pseudo=true
NC_015978.1	Protein Homology	CDS	131674	132606	.	-	0	ID=cds-LSA_RS00655;Parent=gene-LSA_RS00655;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166353.1;locus_tag=LSA_RS00655;product=aldo/keto reductase;pseudo=true;transl_table=11
NC_015978.1	RefSeq	gene	132617	132997	.	-	.	ID=gene-LSA_RS00660;Name=LSA_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00660;old_locus_tag=LSA_01320
NC_015978.1	Protein Homology	CDS	132617	132997	.	-	0	ID=cds-WP_041818010.1;Parent=gene-LSA_RS00660;Dbxref=Genbank:WP_041818010.1;Name=WP_041818010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022508.1;locus_tag=LSA_RS00660;product=DUF488 family protein;protein_id=WP_041818010.1;transl_table=11
NC_015978.1	RefSeq	gene	133066	134517	.	-	.	ID=gene-LSA_RS00665;Name=LSA_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00665;old_locus_tag=LSA_01330
NC_015978.1	GeneMarkS-2+	CDS	133066	134517	.	-	0	ID=cds-WP_014081479.1;Parent=gene-LSA_RS00665;Dbxref=Genbank:WP_014081479.1;Name=WP_014081479.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS00665;product=hypothetical protein;protein_id=WP_014081479.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	134507	134926	.	-	.	ID=gene-LSA_RS00670;Name=LSA_RS00670;end_range=134926,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS00670;old_locus_tag=LSA_01340;partial=true;pseudo=true
NC_015978.1	Protein Homology	CDS	134507	134926	.	-	0	ID=cds-LSA_RS00670;Parent=gene-LSA_RS00670;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005524;end_range=134926,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016178285.1;locus_tag=LSA_RS00670;partial=true;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11
NC_015978.1	RefSeq	gene	135053	135451	.	+	.	ID=gene-LSA_RS00675;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LSA_RS00675;old_locus_tag=LSA_01350
NC_015978.1	Protein Homology	CDS	135053	135451	.	+	0	ID=cds-WP_014081459.1-2;Parent=gene-LSA_RS00675;Dbxref=Genbank:WP_014081459.1;Name=WP_014081459.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000762755.1;locus_tag=LSA_RS00675;product=IS200/IS605 family transposase;protein_id=WP_014081459.1;transl_table=11
NC_015978.1	RefSeq	gene	135451	136626	.	+	.	ID=gene-LSA_RS00680;Name=LSA_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00680;old_locus_tag=LSA_01360
NC_015978.1	Protein Homology	CDS	135451	136626	.	+	0	ID=cds-WP_014081481.1-2;Parent=gene-LSA_RS00680;Dbxref=Genbank:WP_014081481.1;Name=WP_014081481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003664510.1;locus_tag=LSA_RS00680;product=RNA-guided endonuclease TnpB family protein;protein_id=WP_014081481.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	136788	137036	.	-	.	ID=gene-LSA_RS00685;Name=LSA_RS00685;end_range=137036,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS00685;old_locus_tag=LSA_01370;partial=true;pseudo=true;start_range=.,136788
NC_015978.1	Protein Homology	CDS	136788	137036	.	-	0	ID=cds-LSA_RS00685;Parent=gene-LSA_RS00685;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0005524;end_range=137036,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016174117.1;locus_tag=LSA_RS00685;partial=true;product=ATP-binding cassette domain-containing protein;pseudo=true;start_range=.,136788;transl_table=11
NC_015978.1	RefSeq	gene	137118	137351	.	+	.	ID=gene-LSA_RS07190;Name=LSA_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07190;old_locus_tag=LSA_01380
NC_015978.1	GeneMarkS-2+	CDS	137118	137351	.	+	0	ID=cds-WP_049777571.1;Parent=gene-LSA_RS07190;Dbxref=Genbank:WP_049777571.1;Name=WP_049777571.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS07190;product=hypothetical protein;protein_id=WP_049777571.1;transl_table=11
NC_015978.1	RefSeq	gene	137352	137561	.	+	.	ID=gene-LSA_RS07195;Name=LSA_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07195;old_locus_tag=LSA_01390
NC_015978.1	Protein Homology	CDS	137352	137561	.	+	0	ID=cds-WP_049777572.1;Parent=gene-LSA_RS07195;Dbxref=Genbank:WP_049777572.1;Name=WP_049777572.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: protein motif:HMM:NF025054.2;locus_tag=LSA_RS07195;product=GNAT family N-acetyltransferase;protein_id=WP_049777572.1;transl_table=11
NC_015978.1	RefSeq	gene	137592	139706	.	-	.	ID=gene-LSA_RS00695;Name=LSA_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00695;old_locus_tag=LSA_01400
NC_015978.1	Protein Homology	CDS	137592	139706	.	-	0	ID=cds-WP_041817511.1;Parent=gene-LSA_RS00695;Dbxref=Genbank:WP_041817511.1;Name=WP_041817511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166967.1;locus_tag=LSA_RS00695;product=sodium:proton antiporter;protein_id=WP_041817511.1;transl_table=11
NC_015978.1	RefSeq	gene	139851	140624	.	+	.	ID=gene-LSA_RS00700;Name=LSA_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00700;old_locus_tag=LSA_01410
NC_015978.1	Protein Homology	CDS	139851	140624	.	+	0	ID=cds-WP_202945048.1;Parent=gene-LSA_RS00700;Dbxref=Genbank:WP_202945048.1;Name=WP_202945048.1;Ontology_term=GO:0045150,GO:0019152;gbkey=CDS;go_function=acetoin dehydrogenase activity|0019152||IEA;go_process=acetoin catabolic process|0045150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007121960.1;locus_tag=LSA_RS00700;product=(S)-acetoin forming diacetyl reductase;protein_id=WP_202945048.1;transl_table=11
NC_015978.1	RefSeq	gene	141150	141347	.	-	.	ID=gene-LSA_RS00710;Name=LSA_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00710;old_locus_tag=LSA_01420
NC_015978.1	GeneMarkS-2+	CDS	141150	141347	.	-	0	ID=cds-WP_014081484.1;Parent=gene-LSA_RS00710;Dbxref=Genbank:WP_014081484.1;Name=WP_014081484.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS00710;product=hypothetical protein;protein_id=WP_014081484.1;transl_table=11
NC_015978.1	RefSeq	gene	141448	142923	.	-	.	ID=gene-LSA_RS00715;Name=LSA_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00715;old_locus_tag=LSA_01430
NC_015978.1	Protein Homology	CDS	141448	142923	.	-	0	ID=cds-WP_014081485.1;Parent=gene-LSA_RS00715;Dbxref=Genbank:WP_014081485.1;Name=WP_014081485.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010023043.1;locus_tag=LSA_RS00715;product=amino acid permease;protein_id=WP_014081485.1;transl_table=11
NC_015978.1	RefSeq	gene	142942	144270	.	-	.	ID=gene-LSA_RS00720;Name=LSA_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00720;old_locus_tag=LSA_01440
NC_015978.1	Protein Homology	CDS	142942	144270	.	-	0	ID=cds-WP_014081486.1;Parent=gene-LSA_RS00720;Dbxref=Genbank:WP_014081486.1;Name=WP_014081486.1;Ontology_term=GO:0008483;gbkey=CDS;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006500671.1;locus_tag=LSA_RS00720;product=aspartate aminotransferase family protein;protein_id=WP_014081486.1;transl_table=11
NC_015978.1	RefSeq	gene	144407	145570	.	-	.	ID=gene-LSA_RS00725;Name=LSA_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00725;old_locus_tag=LSA_01450
NC_015978.1	Protein Homology	CDS	144407	145570	.	-	0	ID=cds-WP_014081487.1;Parent=gene-LSA_RS00725;Dbxref=Genbank:WP_014081487.1;Name=WP_014081487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014939730.1;locus_tag=LSA_RS00725;product=MFS transporter;protein_id=WP_014081487.1;transl_table=11
NC_015978.1	RefSeq	gene	145557	146591	.	-	.	ID=gene-LSA_RS00730;Name=LSA_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00730;old_locus_tag=LSA_01460
NC_015978.1	Protein Homology	CDS	145557	146591	.	-	0	ID=cds-WP_081462386.1;Parent=gene-LSA_RS00730;Dbxref=Genbank:WP_081462386.1;Name=WP_081462386.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019310.2;locus_tag=LSA_RS00730;product=MFS transporter;protein_id=WP_081462386.1;transl_table=11
NC_015978.1	RefSeq	gene	146708	147580	.	+	.	ID=gene-LSA_RS00735;Name=LSA_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00735;old_locus_tag=LSA_01470
NC_015978.1	Protein Homology	CDS	146708	147580	.	+	0	ID=cds-WP_049777573.1;Parent=gene-LSA_RS00735;Dbxref=Genbank:WP_049777573.1;Name=WP_049777573.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017760.2;locus_tag=LSA_RS00735;product=MFS transporter;protein_id=WP_049777573.1;transl_table=11
NC_015978.1	RefSeq	gene	147646	148077	.	+	.	ID=gene-LSA_RS00740;Name=LSA_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00740;old_locus_tag=LSA_01480
NC_015978.1	Protein Homology	CDS	147646	148077	.	+	0	ID=cds-WP_049777574.1;Parent=gene-LSA_RS00740;Dbxref=Genbank:WP_049777574.1;Name=WP_049777574.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013753.2;locus_tag=LSA_RS00740;product=ISL3 family transposase;protein_id=WP_049777574.1;transl_table=11
NC_015978.1	RefSeq	gene	148429	148545	.	+	.	ID=gene-LSA_RS07830;Name=LSA_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07830
NC_015978.1	Protein Homology	CDS	148429	148545	.	+	0	ID=cds-WP_223329483.1;Parent=gene-LSA_RS07830;Dbxref=Genbank:WP_223329483.1;Name=WP_223329483.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012576.2;locus_tag=LSA_RS07830;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_223329483.1;transl_table=11
NC_015978.1	RefSeq	gene	149259	150611	.	+	.	ID=gene-LSA_RS00750;Name=LSA_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00750;old_locus_tag=LSA_01500
NC_015978.1	Protein Homology	CDS	149259	150611	.	+	0	ID=cds-WP_041817514.1;Parent=gene-LSA_RS00750;Dbxref=Genbank:WP_041817514.1;Name=WP_041817514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014947622.1;locus_tag=LSA_RS00750;product=SLC45 family MFS transporter;protein_id=WP_041817514.1;transl_table=11
NC_015978.1	RefSeq	gene	150705	152963	.	+	.	ID=gene-LSA_RS00755;Name=LSA_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00755;old_locus_tag=LSA_01510
NC_015978.1	Protein Homology	CDS	150705	152963	.	+	0	ID=cds-WP_041817516.1;Parent=gene-LSA_RS00755;Dbxref=Genbank:WP_041817516.1;Name=WP_041817516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002827253.1;locus_tag=LSA_RS00755;product=glycoside hydrolase family 65 protein;protein_id=WP_041817516.1;transl_table=11
NC_015978.1	RefSeq	gene	153020	154003	.	+	.	ID=gene-LSA_RS00760;Name=LSA_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00760;old_locus_tag=LSA_01520
NC_015978.1	Protein Homology	CDS	153020	154003	.	+	0	ID=cds-WP_041817517.1;Parent=gene-LSA_RS00760;Dbxref=Genbank:WP_041817517.1;Name=WP_041817517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004910005.1;locus_tag=LSA_RS00760;product=galactose mutarotase;protein_id=WP_041817517.1;transl_table=11
NC_015978.1	RefSeq	gene	154006	154677	.	+	.	ID=gene-LSA_RS00765;Name=pgmB;gbkey=Gene;gene=pgmB;gene_biotype=protein_coding;locus_tag=LSA_RS00765;old_locus_tag=LSA_01530
NC_015978.1	Protein Homology	CDS	154006	154677	.	+	0	ID=cds-WP_014081491.1;Parent=gene-LSA_RS00765;Dbxref=Genbank:WP_014081491.1;Name=WP_014081491.1;Ontology_term=GO:0046352,GO:0008801;gbkey=CDS;gene=pgmB;go_function=beta-phosphoglucomutase activity|0008801||IEA;go_process=disaccharide catabolic process|0046352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014081491.1;locus_tag=LSA_RS00765;product=beta-phosphoglucomutase;protein_id=WP_014081491.1;transl_table=11
NC_015978.1	RefSeq	gene	154748	155251	.	+	.	ID=gene-LSA_RS00770;Name=LSA_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00770;old_locus_tag=LSA_01540
NC_015978.1	Protein Homology	CDS	154748	155251	.	+	0	ID=cds-WP_014081492.1;Parent=gene-LSA_RS00770;Dbxref=Genbank:WP_014081492.1;Name=WP_014081492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014082299.1;locus_tag=LSA_RS00770;product=helix-turn-helix domain-containing protein;protein_id=WP_014081492.1;transl_table=11
NC_015978.1	RefSeq	gene	155251	156105	.	+	.	ID=gene-LSA_RS00775;Name=LSA_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00775;old_locus_tag=LSA_01550
NC_015978.1	Protein Homology	CDS	155251	156105	.	+	0	ID=cds-WP_041817518.1;Parent=gene-LSA_RS00775;Dbxref=Genbank:WP_041817518.1;Name=WP_041817518.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033516.0;locus_tag=LSA_RS00775;product=IS3 family transposase;protein_id=WP_041817518.1;transl_table=11
NC_015978.1	RefSeq	gene	156172	156534	.	-	.	ID=gene-LSA_RS00780;Name=LSA_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00780;old_locus_tag=LSA_01560
NC_015978.1	GeneMarkS-2+	CDS	156172	156534	.	-	0	ID=cds-WP_014081494.1;Parent=gene-LSA_RS00780;Dbxref=Genbank:WP_014081494.1;Name=WP_014081494.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS00780;product=hypothetical protein;protein_id=WP_014081494.1;transl_table=11
NC_015978.1	RefSeq	gene	156840	157427	.	-	.	ID=gene-LSA_RS00785;Name=LSA_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00785;old_locus_tag=LSA_01570
NC_015978.1	Protein Homology	CDS	156840	157427	.	-	0	ID=cds-WP_014081495.1;Parent=gene-LSA_RS00785;Dbxref=Genbank:WP_014081495.1;Name=WP_014081495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005917937.1;locus_tag=LSA_RS00785;product=site-specific integrase;protein_id=WP_014081495.1;transl_table=11
NC_015978.1	RefSeq	gene	157531	157854	.	+	.	ID=gene-LSA_RS07835;Name=LSA_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07835;old_locus_tag=LSA_01580
NC_015978.1	GeneMarkS-2+	CDS	157531	157854	.	+	0	ID=cds-WP_041817520.1;Parent=gene-LSA_RS07835;Dbxref=Genbank:WP_041817520.1;Name=WP_041817520.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS07835;product=hypothetical protein;protein_id=WP_041817520.1;transl_table=11
NC_015978.1	RefSeq	gene	157881	159017	.	+	.	ID=gene-LSA_RS00795;Name=LSA_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00795;old_locus_tag=LSA_01590
NC_015978.1	Protein Homology	CDS	157881	159017	.	+	0	ID=cds-WP_041817521.1;Parent=gene-LSA_RS00795;Dbxref=Genbank:WP_041817521.1;Name=WP_041817521.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026247.2;locus_tag=LSA_RS00795;product=EpsG family protein;protein_id=WP_041817521.1;transl_table=11
NC_015978.1	RefSeq	gene	159051	159443	.	+	.	ID=gene-LSA_RS00800;Name=LSA_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00800;old_locus_tag=LSA_01600
NC_015978.1	Protein Homology	CDS	159051	159443	.	+	0	ID=cds-WP_163600789.1;Parent=gene-LSA_RS00800;Dbxref=Genbank:WP_163600789.1;Name=WP_163600789.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013652.2;locus_tag=LSA_RS00800;product=hypothetical protein;protein_id=WP_163600789.1;transl_table=11
NC_015978.1	RefSeq	gene	159797	160249	.	+	.	ID=gene-LSA_RS00805;Name=LSA_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00805;old_locus_tag=LSA_01610
NC_015978.1	Protein Homology	CDS	159797	160249	.	+	0	ID=cds-WP_049777576.1;Parent=gene-LSA_RS00805;Dbxref=Genbank:WP_049777576.1;Name=WP_049777576.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024908.2;locus_tag=LSA_RS00805;product=helix-turn-helix domain containing protein;protein_id=WP_049777576.1;transl_table=11
NC_015978.1	RefSeq	gene	160249	161103	.	+	.	ID=gene-LSA_RS00810;Name=LSA_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00810;old_locus_tag=LSA_01620
NC_015978.1	Protein Homology	CDS	160249	161103	.	+	0	ID=cds-WP_041817518.1-2;Parent=gene-LSA_RS00810;Dbxref=Genbank:WP_041817518.1;Name=WP_041817518.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033516.0;locus_tag=LSA_RS00810;product=IS3 family transposase;protein_id=WP_041817518.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	161340	161983	.	+	.	ID=gene-LSA_RS00815;Name=LSA_RS00815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS00815;old_locus_tag=LSA_01630;pseudo=true
NC_015978.1	Protein Homology	CDS	161340	161983	.	+	0	ID=cds-LSA_RS00815;Parent=gene-LSA_RS00815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007126098.1;locus_tag=LSA_RS00815;product=sugar transferase;pseudo=true;transl_table=11
NC_015978.1	RefSeq	gene	162004	163110	.	+	.	ID=gene-LSA_RS00820;Name=LSA_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00820;old_locus_tag=LSA_01650
NC_015978.1	Protein Homology	CDS	162004	163110	.	+	0	ID=cds-WP_041817523.1;Parent=gene-LSA_RS00820;Dbxref=Genbank:WP_041817523.1;Name=WP_041817523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016396210.1;locus_tag=LSA_RS00820;product=glycosyltransferase;protein_id=WP_041817523.1;transl_table=11
NC_015978.1	RefSeq	gene	163489	164409	.	+	.	ID=gene-LSA_RS00825;Name=LSA_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00825;old_locus_tag=LSA_01660
NC_015978.1	Protein Homology	CDS	163489	164409	.	+	0	ID=cds-WP_049777577.1;Parent=gene-LSA_RS00825;Dbxref=Genbank:WP_049777577.1;Name=WP_049777577.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017515.2;locus_tag=LSA_RS00825;product=capsular polysaccharide synthesis protein;protein_id=WP_049777577.1;transl_table=11
NC_015978.1	RefSeq	gene	164475	165683	.	-	.	ID=gene-LSA_RS00830;Name=LSA_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00830;old_locus_tag=LSA_01670
NC_015978.1	Protein Homology	CDS	164475	165683	.	-	0	ID=cds-WP_049777578.1;Parent=gene-LSA_RS00830;Dbxref=Genbank:WP_049777578.1;Name=WP_049777578.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002328814.1;locus_tag=LSA_RS00830;product=IS256 family transposase;protein_id=WP_049777578.1;transl_table=11
NC_015978.1	RefSeq	gene	165780	166394	.	+	.	ID=gene-LSA_RS00835;Name=LSA_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00835;old_locus_tag=LSA_01680
NC_015978.1	GeneMarkS-2+	CDS	165780	166394	.	+	0	ID=cds-WP_041817525.1;Parent=gene-LSA_RS00835;Dbxref=Genbank:WP_041817525.1;Name=WP_041817525.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS00835;product=hypothetical protein;protein_id=WP_041817525.1;transl_table=11
NC_015978.1	RefSeq	gene	166951	167919	.	+	.	ID=gene-LSA_RS00845;Name=LSA_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00845;old_locus_tag=LSA_01700
NC_015978.1	Protein Homology	CDS	166951	167919	.	+	0	ID=cds-WP_014081503.1;Parent=gene-LSA_RS00845;Dbxref=Genbank:WP_014081503.1;Name=WP_014081503.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.2;locus_tag=LSA_RS00845;product=glycosyltransferase family 2 protein;protein_id=WP_014081503.1;transl_table=11
NC_015978.1	RefSeq	gene	167924	169372	.	+	.	ID=gene-LSA_RS00850;Name=LSA_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00850;old_locus_tag=LSA_01710
NC_015978.1	GeneMarkS-2+	CDS	167924	169372	.	+	0	ID=cds-WP_014081504.1;Parent=gene-LSA_RS00850;Dbxref=Genbank:WP_014081504.1;Name=WP_014081504.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS00850;product=oligosaccharide flippase family protein;protein_id=WP_014081504.1;transl_table=11
NC_015978.1	RefSeq	gene	169469	170437	.	+	.	ID=gene-LSA_RS00855;Name=LSA_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00855;old_locus_tag=LSA_01720
NC_015978.1	Protein Homology	CDS	169469	170437	.	+	0	ID=cds-WP_014081505.1;Parent=gene-LSA_RS00855;Dbxref=Genbank:WP_014081505.1;Name=WP_014081505.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.2;locus_tag=LSA_RS00855;product=glycosyltransferase;protein_id=WP_014081505.1;transl_table=11
NC_015978.1	RefSeq	gene	170635	171063	.	-	.	ID=gene-LSA_RS00865;Name=LSA_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00865;old_locus_tag=LSA_01740
NC_015978.1	Protein Homology	CDS	170635	171063	.	-	0	ID=cds-WP_014081507.1;Parent=gene-LSA_RS00865;Dbxref=Genbank:WP_014081507.1;Name=WP_014081507.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF024997.2;locus_tag=LSA_RS00865;product=DDE-type integrase/transposase/recombinase;protein_id=WP_014081507.1;transl_table=11
NC_015978.1	RefSeq	gene	171126	171617	.	+	.	ID=gene-LSA_RS00870;Name=LSA_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00870;old_locus_tag=LSA_01750
NC_015978.1	Protein Homology	CDS	171126	171617	.	+	0	ID=cds-WP_014081508.1;Parent=gene-LSA_RS00870;Dbxref=Genbank:WP_014081508.1;Name=WP_014081508.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013677.2;locus_tag=LSA_RS00870;product=helix-turn-helix domain-containing protein;protein_id=WP_014081508.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	171937	172254	.	+	.	ID=gene-LSA_RS07840;Name=LSA_RS07840;end_range=172254,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS07840;partial=true;pseudo=true
NC_015978.1	Protein Homology	CDS	171937	172254	.	+	0	ID=cds-LSA_RS07840;Parent=gene-LSA_RS07840;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=172254,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012870.2;locus_tag=LSA_RS07840;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11
NC_015978.1	RefSeq	gene	172335	172490	.	+	.	ID=gene-LSA_RS07720;Name=LSA_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07720
NC_015978.1	Protein Homology	CDS	172335	172490	.	+	0	ID=cds-WP_103434659.1;Parent=gene-LSA_RS07720;Dbxref=Genbank:WP_103434659.1;Name=WP_103434659.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF025063.2;locus_tag=LSA_RS07720;product=IS3 family transposase;protein_id=WP_103434659.1;transl_table=11
NC_015978.1	RefSeq	gene	172767	174434	.	-	.	ID=gene-LSA_RS00880;Name=LSA_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00880;old_locus_tag=LSA_01770
NC_015978.1	Protein Homology	CDS	172767	174434	.	-	0	ID=cds-WP_014081510.1;Parent=gene-LSA_RS00880;Dbxref=Genbank:WP_014081510.1;Name=WP_014081510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013726962.1;locus_tag=LSA_RS00880;product=alpha-glucosidase;protein_id=WP_014081510.1;transl_table=11
NC_015978.1	RefSeq	gene	174453	175844	.	-	.	ID=gene-LSA_RS00885;Name=LSA_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00885;old_locus_tag=LSA_01780
NC_015978.1	Protein Homology	CDS	174453	175844	.	-	0	ID=cds-WP_014081511.1;Parent=gene-LSA_RS00885;Dbxref=Genbank:WP_014081511.1;Name=WP_014081511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008857759.1;locus_tag=LSA_RS00885;product=SLC45 family MFS transporter;protein_id=WP_014081511.1;transl_table=11
NC_015978.1	RefSeq	gene	176266	176541	.	+	.	ID=gene-LSA_RS00890;Name=LSA_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00890;old_locus_tag=LSA_01790
NC_015978.1	Protein Homology	CDS	176266	176541	.	+	0	ID=cds-WP_014081512.1;Parent=gene-LSA_RS00890;Dbxref=Genbank:WP_014081512.1;Name=WP_014081512.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014081985.1;locus_tag=LSA_RS00890;product=transposase;protein_id=WP_014081512.1;transl_table=11
NC_015978.1	RefSeq	gene	176676	177371	.	+	.	ID=gene-LSA_RS07570;Name=LSA_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07570;old_locus_tag=LSA_01800
NC_015978.1	Protein Homology	CDS	176676	177371	.	+	0	ID=cds-WP_144011130.1;Parent=gene-LSA_RS07570;Dbxref=Genbank:WP_144011130.1;Name=WP_144011130.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004561662.1;locus_tag=LSA_RS07570;product=HAD-IA family hydrolase;protein_id=WP_144011130.1;transl_table=11
NC_015978.1	RefSeq	gene	177514	179067	.	-	.	ID=gene-LSA_RS00900;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=LSA_RS00900;old_locus_tag=LSA_01810
NC_015978.1	Protein Homology	CDS	177514	179067	.	-	0	ID=cds-WP_041817528.1;Parent=gene-LSA_RS00900;Dbxref=Genbank:WP_041817528.1;Name=WP_041817528.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003705433.1;locus_tag=LSA_RS00900;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_041817528.1;transl_table=11
NC_015978.1	RefSeq	gene	179078	180214	.	-	.	ID=gene-LSA_RS00905;Name=LSA_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00905;old_locus_tag=LSA_01820
NC_015978.1	Protein Homology	CDS	179078	180214	.	-	0	ID=cds-WP_041817529.1;Parent=gene-LSA_RS00905;Dbxref=Genbank:WP_041817529.1;Name=WP_041817529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002832530.1;locus_tag=LSA_RS00905;product=IMP dehydrogenase;protein_id=WP_041817529.1;transl_table=11
NC_015978.1	RefSeq	gene	180444	181631	.	+	.	ID=gene-LSA_RS00910;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=LSA_RS00910;old_locus_tag=LSA_01830
NC_015978.1	Protein Homology	CDS	180444	181631	.	+	0	ID=cds-WP_041817531.1;Parent=gene-LSA_RS00910;Dbxref=Genbank:WP_041817531.1;Name=WP_041817531.1;Ontology_term=GO:0006427,GO:0004821,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022350.1;locus_tag=LSA_RS00910;product=histidine--tRNA ligase;protein_id=WP_041817531.1;transl_table=11
NC_015978.1	RefSeq	gene	181729	181801	.	+	.	ID=gene-LSA_RS00915;Name=LSA_RS00915;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS00915;old_locus_tag=LSA_R00090
NC_015978.1	tRNAscan-SE	tRNA	181729	181801	.	+	.	ID=rna-LSA_RS00915;Parent=gene-LSA_RS00915;anticodon=(pos:181762..181764);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS00915;product=tRNA-Lys
NC_015978.1	tRNAscan-SE	exon	181729	181801	.	+	.	ID=exon-LSA_RS00915-1;Parent=rna-LSA_RS00915;anticodon=(pos:181762..181764);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS00915;product=tRNA-Lys
NC_015978.1	RefSeq	gene	182247	182891	.	+	.	ID=gene-LSA_RS00920;Name=LSA_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00920;old_locus_tag=LSA_01840
NC_015978.1	Protein Homology	CDS	182247	182891	.	+	0	ID=cds-WP_014081516.1;Parent=gene-LSA_RS00920;Dbxref=Genbank:WP_014081516.1;Name=WP_014081516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010016943.1;locus_tag=LSA_RS00920;product=amino acid ABC transporter permease;protein_id=WP_014081516.1;transl_table=11
NC_015978.1	RefSeq	gene	182904	183542	.	+	.	ID=gene-LSA_RS00925;Name=LSA_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00925;old_locus_tag=LSA_01850
NC_015978.1	Protein Homology	CDS	182904	183542	.	+	0	ID=cds-WP_014081517.1;Parent=gene-LSA_RS00925;Dbxref=Genbank:WP_014081517.1;Name=WP_014081517.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010016942.1;locus_tag=LSA_RS00925;product=ATP-binding cassette domain-containing protein;protein_id=WP_014081517.1;transl_table=11
NC_015978.1	RefSeq	gene	183539	184372	.	+	.	ID=gene-LSA_RS00930;Name=LSA_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00930;old_locus_tag=LSA_01860
NC_015978.1	Protein Homology	CDS	183539	184372	.	+	0	ID=cds-WP_041817533.1;Parent=gene-LSA_RS00930;Dbxref=Genbank:WP_041817533.1;Name=WP_041817533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003608188.1;locus_tag=LSA_RS00930;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_041817533.1;transl_table=11
NC_015978.1	RefSeq	gene	184447	184956	.	+	.	ID=gene-LSA_RS00935;Name=LSA_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00935;old_locus_tag=LSA_01870
NC_015978.1	Protein Homology	CDS	184447	184956	.	+	0	ID=cds-WP_014081519.1;Parent=gene-LSA_RS00935;Dbxref=Genbank:WP_014081519.1;Name=WP_014081519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014082299.1;locus_tag=LSA_RS00935;product=helix-turn-helix domain-containing protein;protein_id=WP_014081519.1;transl_table=11
NC_015978.1	RefSeq	gene	184950	185804	.	+	.	ID=gene-LSA_RS00940;Name=LSA_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00940;old_locus_tag=LSA_01880
NC_015978.1	Protein Homology	CDS	184950	185804	.	+	0	ID=cds-WP_041817535.1;Parent=gene-LSA_RS00940;Dbxref=Genbank:WP_041817535.1;Name=WP_041817535.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033516.0;locus_tag=LSA_RS00940;product=IS3 family transposase;protein_id=WP_041817535.1;transl_table=11
NC_015978.1	RefSeq	gene	185872	186408	.	-	.	ID=gene-LSA_RS00945;Name=LSA_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00945;old_locus_tag=LSA_01890
NC_015978.1	Protein Homology	CDS	185872	186408	.	-	0	ID=cds-WP_014081521.1;Parent=gene-LSA_RS00945;Dbxref=Genbank:WP_014081521.1;Name=WP_014081521.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021452.1;locus_tag=LSA_RS00945;product=folate family ECF transporter S component;protein_id=WP_014081521.1;transl_table=11
NC_015978.1	cmsearch	riboswitch	186452	186550	.	-	.	ID=id-NC_015978.1:186452..186550;Dbxref=RFAM:RF01831;Note=THF riboswitches regulate genes encoding folate transporters and folate metabolism%3B They are most commonly found in Clostridiales and Lactobacillales;bound_moiety=tetrahydrofolate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
NC_015978.1	RefSeq	gene	186571	187128	.	-	.	ID=gene-LSA_RS00950;Name=LSA_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00950;old_locus_tag=LSA_01900
NC_015978.1	Protein Homology	CDS	186571	187128	.	-	0	ID=cds-WP_049777580.1;Parent=gene-LSA_RS00950;Dbxref=Genbank:WP_049777580.1;Name=WP_049777580.1;Ontology_term=GO:0006555,GO:0004489;gbkey=CDS;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine metabolic process|0006555||IEA;inference=COORDINATES: protein motif:HMM:NF014296.2;locus_tag=LSA_RS00950;product=methylenetetrahydrofolate reductase;protein_id=WP_049777580.1;transl_table=11
NC_015978.1	RefSeq	gene	187251	187649	.	+	.	ID=gene-LSA_RS00955;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LSA_RS00955;old_locus_tag=LSA_01910
NC_015978.1	Protein Homology	CDS	187251	187649	.	+	0	ID=cds-WP_014081459.1-3;Parent=gene-LSA_RS00955;Dbxref=Genbank:WP_014081459.1;Name=WP_014081459.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000762755.1;locus_tag=LSA_RS00955;product=IS200/IS605 family transposase;protein_id=WP_014081459.1;transl_table=11
NC_015978.1	RefSeq	gene	187649	188791	.	+	.	ID=gene-LSA_RS00960;Name=LSA_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00960;old_locus_tag=LSA_01920
NC_015978.1	Protein Homology	CDS	187649	188791	.	+	0	ID=cds-WP_014081523.1;Parent=gene-LSA_RS00960;Dbxref=Genbank:WP_014081523.1;Name=WP_014081523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003664510.1;locus_tag=LSA_RS00960;product=RNA-guided endonuclease TnpB family protein;protein_id=WP_014081523.1;transl_table=11
NC_015978.1	RefSeq	gene	188941	189324	.	-	.	ID=gene-LSA_RS00965;Name=LSA_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00965;old_locus_tag=LSA_01930
NC_015978.1	GeneMarkS-2+	CDS	188941	189324	.	-	0	ID=cds-WP_041817537.1;Parent=gene-LSA_RS00965;Dbxref=Genbank:WP_041817537.1;Name=WP_041817537.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS00965;product=hypothetical protein;protein_id=WP_041817537.1;transl_table=11
NC_015978.1	RefSeq	gene	189326	189838	.	-	.	ID=gene-LSA_RS00970;Name=LSA_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00970;old_locus_tag=LSA_01940
NC_015978.1	Protein Homology	CDS	189326	189838	.	-	0	ID=cds-WP_014081524.1;Parent=gene-LSA_RS00970;Dbxref=Genbank:WP_014081524.1;Name=WP_014081524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013854839.1;locus_tag=LSA_RS00970;product=TetR/AcrR family transcriptional regulator;protein_id=WP_014081524.1;transl_table=11
NC_015978.1	RefSeq	gene	189979	190821	.	-	.	ID=gene-LSA_RS00975;Name=LSA_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00975;old_locus_tag=LSA_01950
NC_015978.1	Protein Homology	CDS	189979	190821	.	-	0	ID=cds-WP_014081525.1;Parent=gene-LSA_RS00975;Dbxref=Genbank:WP_014081525.1;Name=WP_014081525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003557725.1;locus_tag=LSA_RS00975;product=DegV family protein;protein_id=WP_014081525.1;transl_table=11
NC_015978.1	RefSeq	gene	190979	192172	.	+	.	ID=gene-LSA_RS00980;Name=LSA_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00980;old_locus_tag=LSA_01960
NC_015978.1	Protein Homology	CDS	190979	192172	.	+	0	ID=cds-WP_014081526.1;Parent=gene-LSA_RS00980;Dbxref=Genbank:WP_014081526.1;Name=WP_014081526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010023006.1;locus_tag=LSA_RS00980;product=MFS transporter;protein_id=WP_014081526.1;transl_table=11
NC_015978.1	RefSeq	gene	192216	193562	.	-	.	ID=gene-LSA_RS00985;Name=LSA_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00985;old_locus_tag=LSA_01970
NC_015978.1	Protein Homology	CDS	192216	193562	.	-	0	ID=cds-WP_014081527.1;Parent=gene-LSA_RS00985;Dbxref=Genbank:WP_014081527.1;Name=WP_014081527.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012350.2;locus_tag=LSA_RS00985;product=cation transporting ATPase C-terminal domain-containing protein;protein_id=WP_014081527.1;transl_table=11
NC_015978.1	RefSeq	gene	193723	195990	.	+	.	ID=gene-LSA_RS00990;Name=LSA_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00990;old_locus_tag=LSA_01980
NC_015978.1	Protein Homology	CDS	193723	195990	.	+	0	ID=cds-WP_041817539.1;Parent=gene-LSA_RS00990;Dbxref=Genbank:WP_041817539.1;Name=WP_041817539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010023004.1;locus_tag=LSA_RS00990;product=excinuclease ABC subunit UvrA;protein_id=WP_041817539.1;transl_table=11
NC_015978.1	RefSeq	gene	196124	196897	.	+	.	ID=gene-LSA_RS00995;Name=LSA_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS00995;old_locus_tag=LSA_01990
NC_015978.1	Protein Homology	CDS	196124	196897	.	+	0	ID=cds-WP_041817541.1;Parent=gene-LSA_RS00995;Dbxref=Genbank:WP_041817541.1;Name=WP_041817541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167277.1;locus_tag=LSA_RS00995;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_041817541.1;transl_table=11
NC_015978.1	RefSeq	gene	196899	197075	.	+	.	ID=gene-LSA_RS07725;Name=LSA_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07725;old_locus_tag=LSA_02000
NC_015978.1	GeneMarkS-2+	CDS	196899	197075	.	+	0	ID=cds-WP_163600786.1;Parent=gene-LSA_RS07725;Dbxref=Genbank:WP_163600786.1;Name=WP_163600786.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS07725;product=hypothetical protein;protein_id=WP_163600786.1;transl_table=11
NC_015978.1	RefSeq	gene	197124	197591	.	-	.	ID=gene-LSA_RS01000;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=LSA_RS01000;old_locus_tag=LSA_02010
NC_015978.1	Protein Homology	CDS	197124	197591	.	-	0	ID=cds-WP_014081530.1;Parent=gene-LSA_RS01000;Dbxref=Genbank:WP_014081530.1;Name=WP_014081530.1;Ontology_term=GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019251998.1;locus_tag=LSA_RS01000;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_014081530.1;transl_table=11
NC_015978.1	RefSeq	gene	197601	200645	.	-	.	ID=gene-LSA_RS01005;Name=LSA_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01005;old_locus_tag=LSA_02020
NC_015978.1	Protein Homology	CDS	197601	200645	.	-	0	ID=cds-WP_014081531.1;Parent=gene-LSA_RS01005;Dbxref=Genbank:WP_014081531.1;Name=WP_014081531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022998.1;locus_tag=LSA_RS01005;product=YfhO family protein;protein_id=WP_014081531.1;transl_table=11
NC_015978.1	RefSeq	gene	200695	202065	.	-	.	ID=gene-LSA_RS01010;Name=LSA_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01010;old_locus_tag=LSA_02030
NC_015978.1	Protein Homology	CDS	200695	202065	.	-	0	ID=cds-WP_014081532.1;Parent=gene-LSA_RS01010;Dbxref=Genbank:WP_014081532.1;Name=WP_014081532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010620463.1;locus_tag=LSA_RS01010;product=hemolysin family protein;protein_id=WP_014081532.1;transl_table=11
NC_015978.1	RefSeq	gene	202279	204615	.	+	.	ID=gene-LSA_RS01015;Name=LSA_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01015;old_locus_tag=LSA_02040
NC_015978.1	Protein Homology	CDS	202279	204615	.	+	0	ID=cds-WP_014081533.1;Parent=gene-LSA_RS01015;Dbxref=Genbank:WP_014081533.1;Name=WP_014081533.1;Ontology_term=GO:0005215,GO:0005524,GO:0016887,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166346.1;locus_tag=LSA_RS01015;product=HAD-IC family P-type ATPase;protein_id=WP_014081533.1;transl_table=11
NC_015978.1	RefSeq	gene	204615	205322	.	+	.	ID=gene-LSA_RS01020;Name=LSA_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01020;old_locus_tag=LSA_02050
NC_015978.1	GeneMarkS-2+	CDS	204615	205322	.	+	0	ID=cds-WP_041817543.1;Parent=gene-LSA_RS01020;Dbxref=Genbank:WP_041817543.1;Name=WP_041817543.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS01020;product=hypothetical protein;protein_id=WP_041817543.1;transl_table=11
NC_015978.1	RefSeq	gene	205405	205803	.	+	.	ID=gene-LSA_RS01025;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LSA_RS01025;old_locus_tag=LSA_02060
NC_015978.1	Protein Homology	CDS	205405	205803	.	+	0	ID=cds-WP_014081459.1-4;Parent=gene-LSA_RS01025;Dbxref=Genbank:WP_014081459.1;Name=WP_014081459.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000762755.1;locus_tag=LSA_RS01025;product=IS200/IS605 family transposase;protein_id=WP_014081459.1;transl_table=11
NC_015978.1	RefSeq	gene	205803	206978	.	+	.	ID=gene-LSA_RS01030;Name=LSA_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01030;old_locus_tag=LSA_02070
NC_015978.1	Protein Homology	CDS	205803	206978	.	+	0	ID=cds-WP_014081534.1;Parent=gene-LSA_RS01030;Dbxref=Genbank:WP_014081534.1;Name=WP_014081534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003664510.1;locus_tag=LSA_RS01030;product=RNA-guided endonuclease TnpB family protein;protein_id=WP_014081534.1;transl_table=11
NC_015978.1	RefSeq	gene	207547	210162	.	+	.	ID=gene-LSA_RS01035;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=LSA_RS01035;old_locus_tag=LSA_02080
NC_015978.1	Protein Homology	CDS	207547	210162	.	+	0	ID=cds-WP_041817544.1;Parent=gene-LSA_RS01035;Dbxref=Genbank:WP_041817544.1;Name=WP_041817544.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022994.1;locus_tag=LSA_RS01035;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_041817544.1;transl_table=11
NC_015978.1	RefSeq	gene	210201	211085	.	-	.	ID=gene-LSA_RS01040;Name=LSA_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01040;old_locus_tag=LSA_02090
NC_015978.1	Protein Homology	CDS	210201	211085	.	-	0	ID=cds-WP_014081536.1;Parent=gene-LSA_RS01040;Dbxref=Genbank:WP_014081536.1;Name=WP_014081536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022992.1;locus_tag=LSA_RS01040;product=LysR family transcriptional regulator;protein_id=WP_014081536.1;transl_table=11
NC_015978.1	RefSeq	gene	211204	212847	.	+	.	ID=gene-LSA_RS01045;Name=LSA_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01045;old_locus_tag=LSA_02100
NC_015978.1	Protein Homology	CDS	211204	212847	.	+	0	ID=cds-WP_014081537.1;Parent=gene-LSA_RS01045;Dbxref=Genbank:WP_014081537.1;Name=WP_014081537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166344.1;locus_tag=LSA_RS01045;product=NAD-dependent malic enzyme;protein_id=WP_014081537.1;transl_table=11
NC_015978.1	RefSeq	gene	212928	213920	.	+	.	ID=gene-LSA_RS01050;Name=LSA_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01050;old_locus_tag=LSA_02110
NC_015978.1	Protein Homology	CDS	212928	213920	.	+	0	ID=cds-WP_014081538.1;Parent=gene-LSA_RS01050;Dbxref=Genbank:WP_014081538.1;Name=WP_014081538.1;Ontology_term=GO:0055085,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010579561.1;locus_tag=LSA_RS01050;product=AEC family transporter;protein_id=WP_014081538.1;transl_table=11
NC_015978.1	RefSeq	gene	214074	214328	.	-	.	ID=gene-LSA_RS01055;Name=LSA_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01055;old_locus_tag=LSA_02120
NC_015978.1	GeneMarkS-2+	CDS	214074	214328	.	-	0	ID=cds-WP_219729274.1;Parent=gene-LSA_RS01055;Dbxref=Genbank:WP_219729274.1;Name=WP_219729274.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS01055;product=hypothetical protein;protein_id=WP_219729274.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	214546	215100	.	-	.	ID=gene-LSA_RS07580;Name=LSA_RS07580;end_range=215100,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS07580;old_locus_tag=LSA_02130;partial=true;pseudo=true
NC_015978.1	Protein Homology	CDS	214546	215100	.	-	0	ID=cds-LSA_RS07580;Parent=gene-LSA_RS07580;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=215100,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033516.0;locus_tag=LSA_RS07580;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11
NC_015978.1	RefSeq	gene	215435	215686	.	-	.	ID=gene-LSA_RS07845;Name=LSA_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07845;old_locus_tag=LSA_02150
NC_015978.1	Protein Homology	CDS	215435	215686	.	-	0	ID=cds-WP_014081540.1;Parent=gene-LSA_RS07845;Dbxref=Genbank:WP_014081540.1;Name=WP_014081540.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013677.2;locus_tag=LSA_RS07845;product=IS3 family transposase;protein_id=WP_014081540.1;transl_table=11
NC_015978.1	RefSeq	gene	215831	218329	.	+	.	ID=gene-LSA_RS01070;Name=LSA_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01070;old_locus_tag=LSA_02160
NC_015978.1	Protein Homology	CDS	215831	218329	.	+	0	ID=cds-WP_014081541.1;Parent=gene-LSA_RS01070;Dbxref=Genbank:WP_014081541.1;Name=WP_014081541.1;Ontology_term=GO:0009758,GO:0050053;gbkey=CDS;go_function=levansucrase activity|0050053||IEA;go_process=carbohydrate utilization|0009758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016496829.1;locus_tag=LSA_RS01070;product=glycoside hydrolase family 68 protein;protein_id=WP_014081541.1;transl_table=11
NC_015978.1	RefSeq	gene	219127	219486	.	-	.	ID=gene-LSA_RS07385;Name=LSA_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07385;old_locus_tag=LSA_02180
NC_015978.1	Protein Homology	CDS	219127	219486	.	-	0	ID=cds-WP_225361797.1;Parent=gene-LSA_RS07385;Dbxref=Genbank:WP_225361797.1;Name=WP_225361797.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:NF012464.2;locus_tag=LSA_RS07385;product=recombinase family protein;protein_id=WP_225361797.1;transl_table=11
NC_015978.1	RefSeq	gene	219810	220070	.	-	.	ID=gene-LSA_RS07850;Name=LSA_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07850;old_locus_tag=LSA_02190
NC_015978.1	Protein Homology	CDS	219810	220070	.	-	0	ID=cds-WP_041817545.1;Parent=gene-LSA_RS07850;Dbxref=Genbank:WP_041817545.1;Name=WP_041817545.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024908.2;locus_tag=LSA_RS07850;product=helix-turn-helix domain-containing protein;protein_id=WP_041817545.1;transl_table=11
NC_015978.1	RefSeq	gene	220193	220831	.	+	.	ID=gene-LSA_RS01085;Name=LSA_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01085;old_locus_tag=LSA_02200
NC_015978.1	Protein Homology	CDS	220193	220831	.	+	0	ID=cds-WP_041818032.1;Parent=gene-LSA_RS01085;Dbxref=Genbank:WP_041818032.1;Name=WP_041818032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014568772.1;locus_tag=LSA_RS01085;product=HD domain-containing protein;protein_id=WP_041818032.1;transl_table=11
NC_015978.1	RefSeq	gene	220902	221213	.	+	.	ID=gene-LSA_RS07200;Name=LSA_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07200;old_locus_tag=LSA_02210
NC_015978.1	Protein Homology	CDS	220902	221213	.	+	0	ID=cds-WP_049777583.1;Parent=gene-LSA_RS07200;Dbxref=Genbank:WP_049777583.1;Name=WP_049777583.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014069.2;locus_tag=LSA_RS07200;product=HD domain-containing protein;protein_id=WP_049777583.1;transl_table=11
NC_015978.1	RefSeq	gene	221292	221501	.	+	.	ID=gene-LSA_RS07205;Name=LSA_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07205;old_locus_tag=LSA_02220
NC_015978.1	GeneMarkS-2+	CDS	221292	221501	.	+	0	ID=cds-WP_049777584.1;Parent=gene-LSA_RS07205;Dbxref=Genbank:WP_049777584.1;Name=WP_049777584.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS07205;product=hypothetical protein;protein_id=WP_049777584.1;transl_table=11
NC_015978.1	RefSeq	gene	221544	223568	.	+	.	ID=gene-LSA_RS01095;Name=LSA_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01095;old_locus_tag=LSA_02230
NC_015978.1	Protein Homology	CDS	221544	223568	.	+	0	ID=cds-WP_049777642.1;Parent=gene-LSA_RS01095;Dbxref=Genbank:WP_049777642.1;Name=WP_049777642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015474648.1;locus_tag=LSA_RS01095;product=KUP/HAK/KT family potassium transporter;protein_id=WP_049777642.1;transl_table=11
NC_015978.1	RefSeq	gene	223647	224207	.	+	.	ID=gene-LSA_RS01100;Name=LSA_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01100;old_locus_tag=LSA_02240
NC_015978.1	Protein Homology	CDS	223647	224207	.	+	0	ID=cds-WP_014081545.1;Parent=gene-LSA_RS01100;Dbxref=Genbank:WP_014081545.1;Name=WP_014081545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003686655.1;locus_tag=LSA_RS01100;product=cadmium resistance transporter;protein_id=WP_014081545.1;transl_table=11
NC_015978.1	RefSeq	gene	224219	224548	.	+	.	ID=gene-LSA_RS01105;Name=LSA_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01105;old_locus_tag=LSA_02250
NC_015978.1	Protein Homology	CDS	224219	224548	.	+	0	ID=cds-WP_014081546.1;Parent=gene-LSA_RS01105;Dbxref=Genbank:WP_014081546.1;Name=WP_014081546.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011667784.1;locus_tag=LSA_RS01105;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WP_014081546.1;transl_table=11
NC_015978.1	RefSeq	gene	224586	225092	.	-	.	ID=gene-LSA_RS01110;Name=LSA_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01110;old_locus_tag=LSA_02260
NC_015978.1	Protein Homology	CDS	224586	225092	.	-	0	ID=cds-WP_014081547.1;Parent=gene-LSA_RS01110;Dbxref=Genbank:WP_014081547.1;Name=WP_014081547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008212641.1;locus_tag=LSA_RS01110;product=aminoacyl-tRNA deacylase;protein_id=WP_014081547.1;transl_table=11
NC_015978.1	RefSeq	gene	225212	226792	.	+	.	ID=gene-LSA_RS01115;Name=LSA_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01115;old_locus_tag=LSA_02270
NC_015978.1	Protein Homology	CDS	225212	226792	.	+	0	ID=cds-WP_041817546.1;Parent=gene-LSA_RS01115;Dbxref=Genbank:WP_041817546.1;Name=WP_041817546.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166340.1;locus_tag=LSA_RS01115;product=Nramp family divalent metal transporter;protein_id=WP_041817546.1;transl_table=11
NC_015978.1	RefSeq	gene	226867	227745	.	-	.	ID=gene-LSA_RS01120;Name=LSA_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01120;old_locus_tag=LSA_02280
NC_015978.1	Protein Homology	CDS	226867	227745	.	-	0	ID=cds-WP_014081549.1;Parent=gene-LSA_RS01120;Dbxref=Genbank:WP_014081549.1;Name=WP_014081549.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033516.0;locus_tag=LSA_RS01120;product=IS3 family transposase;protein_id=WP_014081549.1;transl_table=11
NC_015978.1	RefSeq	gene	227833	228558	.	+	.	ID=gene-LSA_RS01125;Name=LSA_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01125;old_locus_tag=LSA_02290
NC_015978.1	Protein Homology	CDS	227833	228558	.	+	0	ID=cds-WP_041817547.1;Parent=gene-LSA_RS01125;Dbxref=Genbank:WP_041817547.1;Name=WP_041817547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166339.1;locus_tag=LSA_RS01125;product=GntR family transcriptional regulator;protein_id=WP_041817547.1;transl_table=11
NC_015978.1	RefSeq	gene	228745	231138	.	+	.	ID=gene-LSA_RS01130;Name=LSA_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01130;old_locus_tag=LSA_02300
NC_015978.1	Protein Homology	CDS	228745	231138	.	+	0	ID=cds-WP_014081551.1;Parent=gene-LSA_RS01130;Dbxref=Genbank:WP_014081551.1;Name=WP_014081551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013728905.1;locus_tag=LSA_RS01130;product=phosphoketolase family protein;protein_id=WP_014081551.1;transl_table=11
NC_015978.1	RefSeq	gene	231195	232076	.	-	.	ID=gene-LSA_RS01135;Name=LSA_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01135;old_locus_tag=LSA_02310
NC_015978.1	Protein Homology	CDS	231195	232076	.	-	0	ID=cds-WP_049777585.1;Parent=gene-LSA_RS01135;Dbxref=Genbank:WP_049777585.1;Name=WP_049777585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022980.1;locus_tag=LSA_RS01135;product=RluA family pseudouridine synthase;protein_id=WP_049777585.1;transl_table=11
NC_015978.1	RefSeq	gene	232130	232570	.	-	.	ID=gene-LSA_RS01140;Name=LSA_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01140;old_locus_tag=LSA_02320
NC_015978.1	Protein Homology	CDS	232130	232570	.	-	0	ID=cds-WP_041817549.1;Parent=gene-LSA_RS01140;Dbxref=Genbank:WP_041817549.1;Name=WP_041817549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166333.1;locus_tag=LSA_RS01140;product=universal stress protein;protein_id=WP_041817549.1;transl_table=11
NC_015978.1	RefSeq	gene	232930	234111	.	+	.	ID=gene-LSA_RS01145;Name=LSA_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01145;old_locus_tag=LSA_02330
NC_015978.1	Protein Homology	CDS	232930	234111	.	+	0	ID=cds-WP_041817551.1;Parent=gene-LSA_RS01145;Dbxref=Genbank:WP_041817551.1;Name=WP_041817551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166331.1;locus_tag=LSA_RS01145;product=PLP-dependent aminotransferase family protein;protein_id=WP_041817551.1;transl_table=11
NC_015978.1	RefSeq	gene	234232	234639	.	+	.	ID=gene-LSA_RS01150;Name=LSA_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01150;old_locus_tag=LSA_02340
NC_015978.1	GeneMarkS-2+	CDS	234232	234639	.	+	0	ID=cds-WP_014081555.1;Parent=gene-LSA_RS01150;Dbxref=Genbank:WP_014081555.1;Name=WP_014081555.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS01150;product=hypothetical protein;protein_id=WP_014081555.1;transl_table=11
NC_015978.1	RefSeq	gene	234652	234975	.	+	.	ID=gene-LSA_RS01155;Name=LSA_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01155;old_locus_tag=LSA_02350
NC_015978.1	GeneMarkS-2+	CDS	234652	234975	.	+	0	ID=cds-WP_014081556.1;Parent=gene-LSA_RS01155;Dbxref=Genbank:WP_014081556.1;Name=WP_014081556.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS01155;product=hypothetical protein;protein_id=WP_014081556.1;transl_table=11
NC_015978.1	RefSeq	gene	234986	235141	.	+	.	ID=gene-LSA_RS07730;Name=LSA_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07730;old_locus_tag=LSA_02360
NC_015978.1	GeneMarkS-2+	CDS	234986	235141	.	+	0	ID=cds-WP_014081557.1;Parent=gene-LSA_RS07730;Dbxref=Genbank:WP_014081557.1;Name=WP_014081557.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS07730;product=hypothetical protein;protein_id=WP_014081557.1;transl_table=11
NC_015978.1	RefSeq	gene	235352	235891	.	-	.	ID=gene-LSA_RS01160;Name=LSA_RS01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01160;old_locus_tag=LSA_02370
NC_015978.1	Protein Homology	CDS	235352	235891	.	-	0	ID=cds-WP_014081558.1;Parent=gene-LSA_RS01160;Dbxref=Genbank:WP_014081558.1;Name=WP_014081558.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166327.1;locus_tag=LSA_RS01160;product=GNAT family N-acetyltransferase;protein_id=WP_014081558.1;transl_table=11
NC_015978.1	RefSeq	gene	235900	236745	.	-	.	ID=gene-LSA_RS01165;Name=LSA_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01165;old_locus_tag=LSA_02380
NC_015978.1	Protein Homology	CDS	235900	236745	.	-	0	ID=cds-WP_041817552.1;Parent=gene-LSA_RS01165;Dbxref=Genbank:WP_041817552.1;Name=WP_041817552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011673033.1;locus_tag=LSA_RS01165;product=hypothetical protein;protein_id=WP_041817552.1;transl_table=11
NC_015978.1	RefSeq	gene	236758	237165	.	-	.	ID=gene-LSA_RS01170;Name=LSA_RS01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01170;old_locus_tag=LSA_02390
NC_015978.1	Protein Homology	CDS	236758	237165	.	-	0	ID=cds-WP_014081560.1;Parent=gene-LSA_RS01170;Dbxref=Genbank:WP_014081560.1;Name=WP_014081560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022974.1;locus_tag=LSA_RS01170;product=helix-turn-helix domain-containing protein;protein_id=WP_014081560.1;transl_table=11
NC_015978.1	RefSeq	gene	237329	238921	.	+	.	ID=gene-LSA_RS01175;Name=rny;gbkey=Gene;gene=rny;gene_biotype=protein_coding;locus_tag=LSA_RS01175;old_locus_tag=LSA_02400
NC_015978.1	Protein Homology	CDS	237329	238921	.	+	0	ID=cds-WP_041817553.1;Parent=gene-LSA_RS01175;Dbxref=Genbank:WP_041817553.1;Name=WP_041817553.1;Ontology_term=GO:0006402,GO:0004521;gbkey=CDS;gene=rny;go_function=endoribonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166324.1;locus_tag=LSA_RS01175;product=ribonuclease Y;protein_id=WP_041817553.1;transl_table=11
NC_015978.1	RefSeq	gene	238954	240507	.	-	.	ID=gene-LSA_RS01180;Name=LSA_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01180;old_locus_tag=LSA_02410
NC_015978.1	Protein Homology	CDS	238954	240507	.	-	0	ID=cds-WP_041817554.1;Parent=gene-LSA_RS01180;Dbxref=Genbank:WP_041817554.1;Name=WP_041817554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010620417.1;locus_tag=LSA_RS01180;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_041817554.1;transl_table=11
NC_015978.1	RefSeq	gene	240741	241139	.	+	.	ID=gene-LSA_RS01185;Name=spx;gbkey=Gene;gene=spx;gene_biotype=protein_coding;locus_tag=LSA_RS01185;old_locus_tag=LSA_02420
NC_015978.1	Protein Homology	CDS	240741	241139	.	+	0	ID=cds-WP_014081563.1;Parent=gene-LSA_RS01185;Dbxref=Genbank:WP_014081563.1;Name=WP_014081563.1;gbkey=CDS;gene=spx;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020089121.1;locus_tag=LSA_RS01185;product=transcriptional regulator Spx;protein_id=WP_014081563.1;transl_table=11
NC_015978.1	RefSeq	gene	241189	242001	.	+	.	ID=gene-LSA_RS01190;Name=LSA_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01190;old_locus_tag=LSA_02430
NC_015978.1	Protein Homology	CDS	241189	242001	.	+	0	ID=cds-WP_014081564.1;Parent=gene-LSA_RS01190;Dbxref=Genbank:WP_014081564.1;Name=WP_014081564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022967.1;locus_tag=LSA_RS01190;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_014081564.1;transl_table=11
NC_015978.1	RefSeq	gene	242486	242611	.	+	.	ID=gene-LSA_RS07855;Name=LSA_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07855;old_locus_tag=LSA_02460
NC_015978.1	Protein Homology	CDS	242486	242611	.	+	0	ID=cds-WP_014081567.1;Parent=gene-LSA_RS07855;Dbxref=Genbank:WP_014081567.1;Name=WP_014081567.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013677.2;locus_tag=LSA_RS07855;product=IS3 family transposase;protein_id=WP_014081567.1;transl_table=11
NC_015978.1	RefSeq	gene	242791	243114	.	+	.	ID=gene-LSA_RS07860;Name=LSA_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07860;old_locus_tag=LSA_02470
NC_015978.1	Protein Homology	CDS	242791	243114	.	+	0	ID=cds-WP_238331740.1;Parent=gene-LSA_RS07860;Dbxref=Genbank:WP_238331740.1;Name=WP_238331740.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024673.2;locus_tag=LSA_RS07860;product=IS3 family transposase;protein_id=WP_238331740.1;transl_table=11
NC_015978.1	RefSeq	gene	243502	243660	.	+	.	ID=gene-LSA_RS07735;Name=LSA_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07735;old_locus_tag=LSA_02490
NC_015978.1	GeneMarkS-2+	CDS	243502	243660	.	+	0	ID=cds-WP_163600771.1;Parent=gene-LSA_RS07735;Dbxref=Genbank:WP_163600771.1;Name=WP_163600771.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS07735;product=hypothetical protein;protein_id=WP_163600771.1;transl_table=11
NC_015978.1	RefSeq	gene	243835	244314	.	+	.	ID=gene-LSA_RS01205;Name=LSA_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01205;old_locus_tag=LSA_02500
NC_015978.1	GeneMarkS-2+	CDS	243835	244314	.	+	0	ID=cds-WP_014081570.1;Parent=gene-LSA_RS01205;Dbxref=Genbank:WP_014081570.1;Name=WP_014081570.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS01205;product=hypothetical protein;protein_id=WP_014081570.1;transl_table=11
NC_015978.1	RefSeq	gene	244684	245646	.	-	.	ID=gene-LSA_RS01210;Name=LSA_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01210;old_locus_tag=LSA_02510
NC_015978.1	Protein Homology	CDS	244684	245646	.	-	0	ID=cds-WP_041817556.1;Parent=gene-LSA_RS01210;Dbxref=Genbank:WP_041817556.1;Name=WP_041817556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002830036.1;locus_tag=LSA_RS01210;product=nucleoside hydrolase;protein_id=WP_041817556.1;transl_table=11
NC_015978.1	RefSeq	gene	245774	246550	.	-	.	ID=gene-LSA_RS01215;Name=LSA_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01215;old_locus_tag=LSA_02520
NC_015978.1	Protein Homology	CDS	245774	246550	.	-	0	ID=cds-WP_014081572.1;Parent=gene-LSA_RS01215;Dbxref=Genbank:WP_014081572.1;Name=WP_014081572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166319.1;locus_tag=LSA_RS01215;product=alpha/beta hydrolase;protein_id=WP_014081572.1;transl_table=11
NC_015978.1	RefSeq	gene	246601	247590	.	+	.	ID=gene-LSA_RS01220;Name=LSA_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01220;old_locus_tag=LSA_02530
NC_015978.1	Protein Homology	CDS	246601	247590	.	+	0	ID=cds-WP_014081573.1;Parent=gene-LSA_RS01220;Dbxref=Genbank:WP_014081573.1;Name=WP_014081573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003646575.1;locus_tag=LSA_RS01220;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_014081573.1;transl_table=11
NC_015978.1	RefSeq	gene	247636	249774	.	-	.	ID=gene-LSA_RS01225;Name=LSA_RS01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01225;old_locus_tag=LSA_02540
NC_015978.1	Protein Homology	CDS	247636	249774	.	-	0	ID=cds-WP_014081574.1;Parent=gene-LSA_RS01225;Dbxref=Genbank:WP_014081574.1;Name=WP_014081574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022961.1;locus_tag=LSA_RS01225;product=LTA synthase family protein;protein_id=WP_014081574.1;transl_table=11
NC_015978.1	RefSeq	gene	249925	250584	.	+	.	ID=gene-LSA_RS01230;Name=LSA_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01230;old_locus_tag=LSA_02550
NC_015978.1	Protein Homology	CDS	249925	250584	.	+	0	ID=cds-WP_041817557.1;Parent=gene-LSA_RS01230;Dbxref=Genbank:WP_041817557.1;Name=WP_041817557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166316.1;locus_tag=LSA_RS01230;product=phosphoglycerate mutase family protein;protein_id=WP_041817557.1;transl_table=11
NC_015978.1	RefSeq	gene	250617	251066	.	+	.	ID=gene-LSA_RS01235;Name=LSA_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01235;old_locus_tag=LSA_02560
NC_015978.1	Protein Homology	CDS	250617	251066	.	+	0	ID=cds-WP_014081576.1;Parent=gene-LSA_RS01235;Dbxref=Genbank:WP_014081576.1;Name=WP_014081576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022959.1;locus_tag=LSA_RS01235;product=MerR family transcriptional regulator;protein_id=WP_014081576.1;transl_table=11
NC_015978.1	RefSeq	gene	251086	253098	.	-	.	ID=gene-LSA_RS01240;Name=LSA_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01240;old_locus_tag=LSA_02570
NC_015978.1	GeneMarkS-2+	CDS	251086	253098	.	-	0	ID=cds-WP_041817559.1;Parent=gene-LSA_RS01240;Dbxref=Genbank:WP_041817559.1;Name=WP_041817559.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS01240;product=hypothetical protein;protein_id=WP_041817559.1;transl_table=11
NC_015978.1	RefSeq	gene	253136	254059	.	-	.	ID=gene-LSA_RS01245;Name=LSA_RS01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01245;old_locus_tag=LSA_02580
NC_015978.1	Protein Homology	CDS	253136	254059	.	-	0	ID=cds-WP_041817561.1;Parent=gene-LSA_RS01245;Dbxref=Genbank:WP_041817561.1;Name=WP_041817561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166314.1;locus_tag=LSA_RS01245;product=magnesium transporter CorA family protein;protein_id=WP_041817561.1;transl_table=11
NC_015978.1	RefSeq	gene	254215	254859	.	+	.	ID=gene-LSA_RS01250;Name=LSA_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01250;old_locus_tag=LSA_02590
NC_015978.1	Protein Homology	CDS	254215	254859	.	+	0	ID=cds-WP_049777586.1;Parent=gene-LSA_RS01250;Dbxref=Genbank:WP_049777586.1;Name=WP_049777586.1;Ontology_term=GO:0004040;gbkey=CDS;go_function=amidase activity|0004040||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166313.1;locus_tag=LSA_RS01250;product=glucosaminidase domain-containing protein;protein_id=WP_049777586.1;transl_table=11
NC_015978.1	RefSeq	gene	254873	255613	.	+	.	ID=gene-LSA_RS01255;Name=LSA_RS01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01255;old_locus_tag=LSA_02600
NC_015978.1	Protein Homology	CDS	254873	255613	.	+	0	ID=cds-WP_014081579.1;Parent=gene-LSA_RS01255;Dbxref=Genbank:WP_014081579.1;Name=WP_014081579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022951.1;locus_tag=LSA_RS01255;product=membrane protein;protein_id=WP_014081579.1;transl_table=11
NC_015978.1	RefSeq	gene	255616	255951	.	+	.	ID=gene-LSA_RS01260;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=LSA_RS01260;old_locus_tag=LSA_02610
NC_015978.1	Protein Homology	CDS	255616	255951	.	+	0	ID=cds-WP_014081580.1;Parent=gene-LSA_RS01260;Dbxref=Genbank:WP_014081580.1;Name=WP_014081580.1;Ontology_term=GO:0015036,GO:0005737;gbkey=CDS;gene=trxA;go_component=cytoplasm|0005737||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008856008.1;locus_tag=LSA_RS01260;product=thioredoxin;protein_id=WP_014081580.1;transl_table=11
NC_015978.1	RefSeq	gene	255944	257326	.	+	.	ID=gene-LSA_RS01265;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=LSA_RS01265;old_locus_tag=LSA_02620
NC_015978.1	Protein Homology	CDS	255944	257326	.	+	0	ID=cds-WP_014081581.1;Parent=gene-LSA_RS01265;Dbxref=Genbank:WP_014081581.1;Name=WP_014081581.1;Ontology_term=GO:0006814,GO:1902600,GO:0015385;gbkey=CDS;gene=nhaC;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166310.1;locus_tag=LSA_RS01265;product=Na+/H+ antiporter NhaC;protein_id=WP_014081581.1;transl_table=11
NC_015978.1	RefSeq	gene	257643	258305	.	+	.	ID=gene-LSA_RS01270;Name=LSA_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01270;old_locus_tag=LSA_02630
NC_015978.1	Protein Homology	CDS	257643	258305	.	+	0	ID=cds-WP_041817562.1;Parent=gene-LSA_RS01270;Dbxref=Genbank:WP_041817562.1;Name=WP_041817562.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013630.2;locus_tag=LSA_RS01270;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_041817562.1;transl_table=11
NC_015978.1	RefSeq	gene	258562	259434	.	-	.	ID=gene-LSA_RS01275;Name=LSA_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01275;old_locus_tag=LSA_02640
NC_015978.1	Protein Homology	CDS	258562	259434	.	-	0	ID=cds-WP_258027359.1;Parent=gene-LSA_RS01275;Dbxref=Genbank:WP_258027359.1;Name=WP_258027359.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033516.0;locus_tag=LSA_RS01275;product=IS3 family transposase;protein_id=WP_258027359.1;transl_table=11
NC_015978.1	RefSeq	gene	259452	259703	.	-	.	ID=gene-LSA_RS01280;Name=LSA_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01280;old_locus_tag=LSA_02650
NC_015978.1	Protein Homology	CDS	259452	259703	.	-	0	ID=cds-WP_014081584.1;Parent=gene-LSA_RS01280;Dbxref=Genbank:WP_014081584.1;Name=WP_014081584.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013677.2;locus_tag=LSA_RS01280;product=IS3 family transposase;protein_id=WP_014081584.1;transl_table=11
NC_015978.1	RefSeq	gene	259817	260425	.	+	.	ID=gene-LSA_RS01285;Name=LSA_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01285;old_locus_tag=LSA_02660
NC_015978.1	GeneMarkS-2+	CDS	259817	260425	.	+	0	ID=cds-WP_103434667.1;Parent=gene-LSA_RS01285;Dbxref=Genbank:WP_103434667.1;Name=WP_103434667.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS01285;product=sugar phosphate isomerase;protein_id=WP_103434667.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	260422	260763	.	+	.	ID=gene-LSA_RS01290;Name=LSA_RS01290;end_range=260763,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS01290;old_locus_tag=LSA_02670;partial=true;pseudo=true;start_range=.,260422
NC_015978.1	Protein Homology	CDS	260422	260763	.	+	0	ID=cds-LSA_RS01290;Parent=gene-LSA_RS01290;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=260763,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016383227.1;locus_tag=LSA_RS01290;partial=true;product=gluconate:proton symporter;pseudo=true;start_range=.,260422;transl_table=11
NC_015978.1	RefSeq	pseudogene	260786	260920	.	+	.	ID=gene-LSA_RS07865;Name=LSA_RS07865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS07865;old_locus_tag=LSA_02680;partial=true;pseudo=true;start_range=.,260786
NC_015978.1	Protein Homology	CDS	260786	260920	.	+	0	ID=cds-LSA_RS07865;Parent=gene-LSA_RS07865;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002821638.1;locus_tag=LSA_RS07865;partial=true;product=3-phosphoglycerate dehydrogenase;pseudo=true;start_range=.,260786;transl_table=11
NC_015978.1	RefSeq	gene	260977	262230	.	-	.	ID=gene-LSA_RS01295;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=LSA_RS01295;old_locus_tag=LSA_02690
NC_015978.1	Protein Homology	CDS	260977	262230	.	-	0	ID=cds-WP_014081587.1;Parent=gene-LSA_RS01295;Dbxref=Genbank:WP_014081587.1;Name=WP_014081587.1;Ontology_term=GO:0006437,GO:0004831,GO:0005737;gbkey=CDS;gene=tyrS;go_component=cytoplasm|0005737||IEA;go_function=tyrosine-tRNA ligase activity|0004831||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011953375.1;locus_tag=LSA_RS01295;product=tyrosine--tRNA ligase;protein_id=WP_014081587.1;transl_table=11
NC_015978.1	RefSeq	gene	262468	263262	.	-	.	ID=gene-LSA_RS01300;Name=LSA_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01300;old_locus_tag=LSA_02700
NC_015978.1	Protein Homology	CDS	262468	263262	.	-	0	ID=cds-WP_041817569.1;Parent=gene-LSA_RS01300;Dbxref=Genbank:WP_041817569.1;Name=WP_041817569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166362.1;locus_tag=LSA_RS01300;product=tyrosine-protein phosphatase;protein_id=WP_041817569.1;transl_table=11
NC_015978.1	RefSeq	gene	263407	263658	.	+	.	ID=gene-LSA_RS01305;Name=LSA_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01305;old_locus_tag=LSA_02710
NC_015978.1	Protein Homology	CDS	263407	263658	.	+	0	ID=cds-WP_014081589.1;Parent=gene-LSA_RS01305;Dbxref=Genbank:WP_014081589.1;Name=WP_014081589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022943.1;locus_tag=LSA_RS01305;product=hypothetical protein;protein_id=WP_014081589.1;transl_table=11
NC_015978.1	RefSeq	gene	263759	265273	.	+	.	ID=gene-LSA_RS01310;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=LSA_RS01310;old_locus_tag=LSA_02720
NC_015978.1	Protein Homology	CDS	263759	265273	.	+	0	ID=cds-WP_014081590.1;Parent=gene-LSA_RS01310;Dbxref=Genbank:WP_014081590.1;Name=WP_014081590.1;Ontology_term=GO:0006071,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008855391.1;locus_tag=LSA_RS01310;product=glycerol kinase GlpK;protein_id=WP_014081590.1;transl_table=11
NC_015978.1	RefSeq	gene	265366	266277	.	+	.	ID=gene-LSA_RS01315;Name=LSA_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01315;old_locus_tag=LSA_02730
NC_015978.1	Protein Homology	CDS	265366	266277	.	+	0	ID=cds-WP_041817571.1;Parent=gene-LSA_RS01315;Dbxref=Genbank:WP_041817571.1;Name=WP_041817571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000029204.1;locus_tag=LSA_RS01315;product=GRP family sugar transporter;protein_id=WP_041817571.1;transl_table=11
NC_015978.1	RefSeq	gene	266319	266750	.	-	.	ID=gene-LSA_RS01320;Name=LSA_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01320;old_locus_tag=LSA_02740
NC_015978.1	GeneMarkS-2+	CDS	266319	266750	.	-	0	ID=cds-WP_014081592.1;Parent=gene-LSA_RS01320;Dbxref=Genbank:WP_014081592.1;Name=WP_014081592.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS01320;product=hypothetical protein;protein_id=WP_014081592.1;transl_table=11
NC_015978.1	RefSeq	gene	266765	268204	.	-	.	ID=gene-LSA_RS01325;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=LSA_RS01325;old_locus_tag=LSA_02750
NC_015978.1	Protein Homology	CDS	266765	268204	.	-	0	ID=cds-WP_041817572.1;Parent=gene-LSA_RS01325;Dbxref=Genbank:WP_041817572.1;Name=WP_041817572.1;Ontology_term=GO:0008649;gbkey=CDS;gene=rlmD;go_function=rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003642454.1;locus_tag=LSA_RS01325;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_041817572.1;transl_table=11
NC_015978.1	RefSeq	gene	268386	268991	.	+	.	ID=gene-LSA_RS01330;Name=LSA_RS01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01330;old_locus_tag=LSA_02760
NC_015978.1	Protein Homology	CDS	268386	268991	.	+	0	ID=cds-WP_014081594.1;Parent=gene-LSA_RS01330;Dbxref=Genbank:WP_014081594.1;Name=WP_014081594.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167110.1;locus_tag=LSA_RS01330;product=ATP-binding cassette domain-containing protein;protein_id=WP_014081594.1;transl_table=11
NC_015978.1	RefSeq	gene	268984	269745	.	+	.	ID=gene-LSA_RS01335;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=LSA_RS01335;old_locus_tag=LSA_02770
NC_015978.1	Protein Homology	CDS	268984	269745	.	+	0	ID=cds-WP_014081595.1;Parent=gene-LSA_RS01335;Dbxref=Genbank:WP_014081595.1;Name=WP_014081595.1;gbkey=CDS;gene=fetB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167109.1;locus_tag=LSA_RS01335;product=iron export ABC transporter permease subunit FetB;protein_id=WP_014081595.1;transl_table=11
NC_015978.1	RefSeq	gene	269799	270728	.	-	.	ID=gene-LSA_RS01340;Name=LSA_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01340;old_locus_tag=LSA_02780
NC_015978.1	Protein Homology	CDS	269799	270728	.	-	0	ID=cds-WP_041817574.1;Parent=gene-LSA_RS01340;Dbxref=Genbank:WP_041817574.1;Name=WP_041817574.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024989.2;locus_tag=LSA_RS01340;product=NADP-dependent oxidoreductase;protein_id=WP_041817574.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	270882	272267	.	-	.	ID=gene-LSA_RS01345;Name=LSA_RS01345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS01345;old_locus_tag=LSA_02790;pseudo=true
NC_015978.1	Protein Homology	CDS	270882	272267	.	-	0	ID=cds-LSA_RS01345;Parent=gene-LSA_RS01345;Note=internal stop;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010624880.1;locus_tag=LSA_RS01345;product=amino acid permease;pseudo=true;transl_table=11
NC_015978.1	RefSeq	gene	272493	273275	.	-	.	ID=gene-LSA_RS01350;Name=LSA_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01350;old_locus_tag=LSA_02810
NC_015978.1	Protein Homology	CDS	272493	273275	.	-	0	ID=cds-WP_014081599.1;Parent=gene-LSA_RS01350;Dbxref=Genbank:WP_014081599.1;Name=WP_014081599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022932.1;locus_tag=LSA_RS01350;product=hypothetical protein;protein_id=WP_014081599.1;transl_table=11
NC_015978.1	RefSeq	gene	273297	274310	.	-	.	ID=gene-LSA_RS01355;Name=LSA_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01355;old_locus_tag=LSA_02820
NC_015978.1	Protein Homology	CDS	273297	274310	.	-	0	ID=cds-WP_014081600.1;Parent=gene-LSA_RS01355;Dbxref=Genbank:WP_014081600.1;Name=WP_014081600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022931.1;locus_tag=LSA_RS01355;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_014081600.1;transl_table=11
NC_015978.1	RefSeq	gene	274667	276289	.	+	.	ID=gene-LSA_RS01360;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=LSA_RS01360;old_locus_tag=LSA_02830
NC_015978.1	Protein Homology	CDS	274667	276289	.	+	0	ID=cds-WP_014081601.1;Parent=gene-LSA_RS01360;Dbxref=Genbank:WP_014081601.1;Name=WP_014081601.1;Ontology_term=GO:0019303,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose catabolic process|0019303||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166250.1;locus_tag=LSA_RS01360;product=ribokinase;protein_id=WP_014081601.1;transl_table=11
NC_015978.1	RefSeq	gene	276358	276606	.	+	.	ID=gene-LSA_RS01365;Name=LSA_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01365;old_locus_tag=LSA_02840
NC_015978.1	GeneMarkS-2+	CDS	276358	276606	.	+	0	ID=cds-WP_014081602.1;Parent=gene-LSA_RS01365;Dbxref=Genbank:WP_014081602.1;Name=WP_014081602.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS01365;product=hypothetical protein;protein_id=WP_014081602.1;transl_table=11
NC_015978.1	RefSeq	gene	276747	277937	.	+	.	ID=gene-LSA_RS01370;Name=LSA_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01370;old_locus_tag=LSA_02850
NC_015978.1	Protein Homology	CDS	276747	277937	.	+	0	ID=cds-WP_041817575.1;Parent=gene-LSA_RS01370;Dbxref=Genbank:WP_041817575.1;Name=WP_041817575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166246.1;locus_tag=LSA_RS01370;product=ammonium transporter;protein_id=WP_041817575.1;transl_table=11
NC_015978.1	RefSeq	gene	277946	278437	.	+	.	ID=gene-LSA_RS01375;Name=LSA_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01375;old_locus_tag=LSA_02860
NC_015978.1	Protein Homology	CDS	277946	278437	.	+	0	ID=cds-WP_041817576.1;Parent=gene-LSA_RS01375;Dbxref=Genbank:WP_041817576.1;Name=WP_041817576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212328.1;locus_tag=LSA_RS01375;product=GNAT family N-acetyltransferase;protein_id=WP_041817576.1;transl_table=11
NC_015978.1	RefSeq	gene	278489	279286	.	-	.	ID=gene-LSA_RS01380;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=LSA_RS01380;old_locus_tag=LSA_02870
NC_015978.1	Protein Homology	CDS	278489	279286	.	-	0	ID=cds-WP_014081605.1;Parent=gene-LSA_RS01380;Dbxref=Genbank:WP_014081605.1;Name=WP_014081605.1;Ontology_term=GO:0036211;gbkey=CDS;gene=map;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020089771.1;locus_tag=LSA_RS01380;product=type I methionyl aminopeptidase;protein_id=WP_014081605.1;transl_table=11
NC_015978.1	RefSeq	gene	279359	280213	.	-	.	ID=gene-LSA_RS01385;Name=LSA_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01385;old_locus_tag=LSA_02880
NC_015978.1	Protein Homology	CDS	279359	280213	.	-	0	ID=cds-WP_041817578.1;Parent=gene-LSA_RS01385;Dbxref=Genbank:WP_041817578.1;Name=WP_041817578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010023008.1;locus_tag=LSA_RS01385;product=DegV family protein;protein_id=WP_041817578.1;transl_table=11
NC_015978.1	RefSeq	gene	280605	280943	.	-	.	ID=gene-LSA_RS01390;Name=LSA_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01390;old_locus_tag=LSA_02900
NC_015978.1	GeneMarkS-2+	CDS	280605	280943	.	-	0	ID=cds-WP_144011131.1;Parent=gene-LSA_RS01390;Dbxref=Genbank:WP_144011131.1;Name=WP_144011131.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS01390;product=hypothetical protein;protein_id=WP_144011131.1;transl_table=11
NC_015978.1	RefSeq	gene	281465	281818	.	-	.	ID=gene-LSA_RS01395;Name=LSA_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01395;old_locus_tag=LSA_02930
NC_015978.1	GeneMarkS-2+	CDS	281465	281818	.	-	0	ID=cds-WP_014081611.1;Parent=gene-LSA_RS01395;Dbxref=Genbank:WP_014081611.1;Name=WP_014081611.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS01395;product=hypothetical protein;protein_id=WP_014081611.1;transl_table=11
NC_015978.1	RefSeq	gene	281978	282874	.	+	.	ID=gene-LSA_RS01400;Name=LSA_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01400;old_locus_tag=LSA_02940
NC_015978.1	Protein Homology	CDS	281978	282874	.	+	0	ID=cds-WP_225361803.1;Parent=gene-LSA_RS01400;Dbxref=Genbank:WP_225361803.1;Name=WP_225361803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167047.1;locus_tag=LSA_RS01400;product=alpha/beta hydrolase;protein_id=WP_225361803.1;transl_table=11
NC_015978.1	RefSeq	gene	282914	284833	.	-	.	ID=gene-LSA_RS01405;Name=LSA_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01405;old_locus_tag=LSA_02950
NC_015978.1	Protein Homology	CDS	282914	284833	.	-	0	ID=cds-WP_014081613.1;Parent=gene-LSA_RS01405;Dbxref=Genbank:WP_014081613.1;Name=WP_014081613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022597.1;locus_tag=LSA_RS01405;product=peptidase M13;protein_id=WP_014081613.1;transl_table=11
NC_015978.1	RefSeq	gene	284937	285638	.	-	.	ID=gene-LSA_RS07605;Name=LSA_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07605;old_locus_tag=LSA_02960
NC_015978.1	Protein Homology	CDS	284937	285638	.	-	0	ID=cds-WP_014081614.1;Parent=gene-LSA_RS07605;Dbxref=Genbank:WP_014081614.1;Name=WP_014081614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167090.1;locus_tag=LSA_RS07605;product=VIT family protein;protein_id=WP_014081614.1;transl_table=11
NC_015978.1	RefSeq	gene	285651	286343	.	-	.	ID=gene-LSA_RS07610;Name=LSA_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07610;old_locus_tag=LSA_02970
NC_015978.1	Protein Homology	CDS	285651	286343	.	-	0	ID=cds-WP_014081615.1;Parent=gene-LSA_RS07610;Dbxref=Genbank:WP_014081615.1;Name=WP_014081615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167091.1;locus_tag=LSA_RS07610;product=VIT family protein;protein_id=WP_014081615.1;transl_table=11
NC_015978.1	RefSeq	gene	286422	287090	.	-	.	ID=gene-LSA_RS01420;Name=LSA_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01420;old_locus_tag=LSA_02980
NC_015978.1	Protein Homology	CDS	286422	287090	.	-	0	ID=cds-WP_014081616.1;Parent=gene-LSA_RS01420;Dbxref=Genbank:WP_014081616.1;Name=WP_014081616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007123945.1;locus_tag=LSA_RS01420;product=DUF421 domain-containing protein;protein_id=WP_014081616.1;transl_table=11
NC_015978.1	RefSeq	gene	287330	287572	.	-	.	ID=gene-LSA_RS01425;Name=LSA_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01425;old_locus_tag=LSA_02990
NC_015978.1	Protein Homology	CDS	287330	287572	.	-	0	ID=cds-WP_014081617.1;Parent=gene-LSA_RS01425;Dbxref=Genbank:WP_014081617.1;Name=WP_014081617.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023122.2;locus_tag=LSA_RS01425;product=DUF3290 family protein;protein_id=WP_014081617.1;transl_table=11
NC_015978.1	RefSeq	gene	287637	288086	.	-	.	ID=gene-LSA_RS01430;Name=LSA_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01430;old_locus_tag=LSA_03000
NC_015978.1	Protein Homology	CDS	287637	288086	.	-	0	ID=cds-WP_014081618.1;Parent=gene-LSA_RS01430;Dbxref=Genbank:WP_014081618.1;Name=WP_014081618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167093.1;locus_tag=LSA_RS01430;product=transcriptional repressor;protein_id=WP_014081618.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	288156	290507	.	-	.	ID=gene-LSA_RS01435;Name=LSA_RS01435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS01435;pseudo=true
NC_015978.1	Protein Homology	CDS	288156	290507	.	-	0	ID=cds-LSA_RS01435;Parent=gene-LSA_RS01435;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010624761.1;locus_tag=LSA_RS01435;product=ATP-dependent DNA helicase;pseudo=true;transl_table=11
NC_015978.1	RefSeq	gene	290563	290904	.	-	.	ID=gene-LSA_RS01440;Name=LSA_RS01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01440;old_locus_tag=LSA_03030
NC_015978.1	Protein Homology	CDS	290563	290904	.	-	0	ID=cds-WP_014081620.1;Parent=gene-LSA_RS01440;Dbxref=Genbank:WP_014081620.1;Name=WP_014081620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022608.1;locus_tag=LSA_RS01440;product=hypothetical protein;protein_id=WP_014081620.1;transl_table=11
NC_015978.1	RefSeq	gene	290961	291332	.	-	.	ID=gene-LSA_RS01445;Name=LSA_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01445;old_locus_tag=LSA_03040
NC_015978.1	Protein Homology	CDS	290961	291332	.	-	0	ID=cds-WP_014081621.1;Parent=gene-LSA_RS01445;Dbxref=Genbank:WP_014081621.1;Name=WP_014081621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003643010.1;locus_tag=LSA_RS01445;product=hypothetical protein;protein_id=WP_014081621.1;transl_table=11
NC_015978.1	RefSeq	gene	291465	292439	.	+	.	ID=gene-LSA_RS01450;Name=LSA_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01450;old_locus_tag=LSA_03050
NC_015978.1	Protein Homology	CDS	291465	292439	.	+	0	ID=cds-WP_014081622.1;Parent=gene-LSA_RS01450;Dbxref=Genbank:WP_014081622.1;Name=WP_014081622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013728744.1;locus_tag=LSA_RS01450;product=asparaginase;protein_id=WP_014081622.1;transl_table=11
NC_015978.1	RefSeq	gene	292455	293624	.	+	.	ID=gene-LSA_RS01455;Name=LSA_RS01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01455;old_locus_tag=LSA_03060
NC_015978.1	Protein Homology	CDS	292455	293624	.	+	0	ID=cds-WP_014081623.1;Parent=gene-LSA_RS01455;Dbxref=Genbank:WP_014081623.1;Name=WP_014081623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166905.1;locus_tag=LSA_RS01455;product=hypothetical protein;protein_id=WP_014081623.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	293626	294437	.	+	.	ID=gene-LSA_RS01460;Name=LSA_RS01460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS01460;old_locus_tag=LSA_03070;pseudo=true
NC_015978.1	Protein Homology	CDS	293626	294437	.	+	0	ID=cds-LSA_RS01460;Parent=gene-LSA_RS01460;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022104.1;locus_tag=LSA_RS01460;product=oxidoreductase;pseudo=true;transl_table=11
NC_015978.1	RefSeq	gene	294494	294964	.	-	.	ID=gene-LSA_RS01465;Name=LSA_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01465;old_locus_tag=LSA_03080
NC_015978.1	Protein Homology	CDS	294494	294964	.	-	0	ID=cds-WP_014081624.1;Parent=gene-LSA_RS01465;Dbxref=Genbank:WP_014081624.1;Name=WP_014081624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166898.1;locus_tag=LSA_RS01465;product=universal stress protein;protein_id=WP_014081624.1;transl_table=11
NC_015978.1	RefSeq	gene	294977	295486	.	-	.	ID=gene-LSA_RS01470;Name=LSA_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01470;old_locus_tag=LSA_03090
NC_015978.1	Protein Homology	CDS	294977	295486	.	-	0	ID=cds-WP_041817580.1;Parent=gene-LSA_RS01470;Dbxref=Genbank:WP_041817580.1;Name=WP_041817580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004466490.1;locus_tag=LSA_RS01470;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_041817580.1;transl_table=11
NC_015978.1	RefSeq	gene	295583	296068	.	-	.	ID=gene-LSA_RS07210;Name=LSA_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07210;old_locus_tag=LSA_03100
NC_015978.1	Protein Homology	CDS	295583	296068	.	-	0	ID=cds-WP_014081626.1;Parent=gene-LSA_RS07210;Dbxref=Genbank:WP_014081626.1;Name=WP_014081626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008211272.1;locus_tag=LSA_RS07210;product=hypothetical protein;protein_id=WP_014081626.1;transl_table=11
NC_015978.1	RefSeq	gene	296128	297747	.	-	.	ID=gene-LSA_RS01480;Name=LSA_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01480;old_locus_tag=LSA_03110
NC_015978.1	Protein Homology	CDS	296128	297747	.	-	0	ID=cds-WP_041817581.1;Parent=gene-LSA_RS01480;Dbxref=Genbank:WP_041817581.1;Name=WP_041817581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166895.1;locus_tag=LSA_RS01480;product=APC family permease;protein_id=WP_041817581.1;transl_table=11
NC_015978.1	RefSeq	gene	297785	298165	.	-	.	ID=gene-LSA_RS01485;Name=LSA_RS01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01485;old_locus_tag=LSA_03120
NC_015978.1	Protein Homology	CDS	297785	298165	.	-	0	ID=cds-WP_014081628.1;Parent=gene-LSA_RS01485;Dbxref=Genbank:WP_014081628.1;Name=WP_014081628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022639.1;locus_tag=LSA_RS01485;product=VOC family protein;protein_id=WP_014081628.1;transl_table=11
NC_015978.1	RefSeq	gene	298287	299837	.	+	.	ID=gene-LSA_RS01490;Name=LSA_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01490;old_locus_tag=LSA_03130
NC_015978.1	Protein Homology	CDS	298287	299837	.	+	0	ID=cds-WP_041817583.1;Parent=gene-LSA_RS01490;Dbxref=Genbank:WP_041817583.1;Name=WP_041817583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014940448.1;locus_tag=LSA_RS01490;product=ATP-binding cassette domain-containing protein;protein_id=WP_041817583.1;transl_table=11
NC_015978.1	RefSeq	gene	299967	300983	.	+	.	ID=gene-LSA_RS01495;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=LSA_RS01495;old_locus_tag=LSA_03140
NC_015978.1	Protein Homology	CDS	299967	300983	.	+	0	ID=cds-WP_041817585.1;Parent=gene-LSA_RS01495;Dbxref=Genbank:WP_041817585.1;Name=WP_041817585.1;Ontology_term=GO:0043101,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine-containing compound salvage|0043101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016185149.1;locus_tag=LSA_RS01495;product=adenosine deaminase;protein_id=WP_041817585.1;transl_table=11
NC_015978.1	RefSeq	gene	301028	301939	.	-	.	ID=gene-LSA_RS01500;Name=LSA_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01500;old_locus_tag=LSA_03150
NC_015978.1	Protein Homology	CDS	301028	301939	.	-	0	ID=cds-WP_014081631.1;Parent=gene-LSA_RS01500;Dbxref=Genbank:WP_014081631.1;Name=WP_014081631.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014940436.1;locus_tag=LSA_RS01500;product=proline iminopeptidase-family hydrolase;protein_id=WP_014081631.1;transl_table=11
NC_015978.1	RefSeq	gene	302075	303208	.	+	.	ID=gene-LSA_RS01505;Name=LSA_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01505;old_locus_tag=LSA_03160
NC_015978.1	Protein Homology	CDS	302075	303208	.	+	0	ID=cds-WP_014081632.1;Parent=gene-LSA_RS01505;Dbxref=Genbank:WP_014081632.1;Name=WP_014081632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022646.1;locus_tag=LSA_RS01505;product=cation:proton antiporter;protein_id=WP_014081632.1;transl_table=11
NC_015978.1	RefSeq	gene	303268	303834	.	+	.	ID=gene-LSA_RS01510;Name=LSA_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01510;old_locus_tag=LSA_03170
NC_015978.1	Protein Homology	CDS	303268	303834	.	+	0	ID=cds-WP_041817586.1;Parent=gene-LSA_RS01510;Dbxref=Genbank:WP_041817586.1;Name=WP_041817586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020280988.1;locus_tag=LSA_RS01510;product=AAA family ATPase;protein_id=WP_041817586.1;transl_table=11
NC_015978.1	RefSeq	gene	303891	304415	.	+	.	ID=gene-LSA_RS01515;Name=LSA_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01515;old_locus_tag=LSA_03180
NC_015978.1	GeneMarkS-2+	CDS	303891	304415	.	+	0	ID=cds-WP_014081634.1;Parent=gene-LSA_RS01515;Dbxref=Genbank:WP_014081634.1;Name=WP_014081634.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS01515;product=hypothetical protein;protein_id=WP_014081634.1;transl_table=11
NC_015978.1	RefSeq	gene	304415	305212	.	+	.	ID=gene-LSA_RS01520;Name=LSA_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01520;old_locus_tag=LSA_03190
NC_015978.1	Protein Homology	CDS	304415	305212	.	+	0	ID=cds-WP_014081635.1;Parent=gene-LSA_RS01520;Dbxref=Genbank:WP_014081635.1;Name=WP_014081635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166887.1;locus_tag=LSA_RS01520;product=hypothetical protein;protein_id=WP_014081635.1;transl_table=11
NC_015978.1	RefSeq	gene	305245	305391	.	-	.	ID=gene-LSA_RS07740;Name=LSA_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07740;old_locus_tag=LSA_03200
NC_015978.1	GeneMarkS-2+	CDS	305245	305391	.	-	0	ID=cds-WP_014081636.1;Parent=gene-LSA_RS07740;Dbxref=Genbank:WP_014081636.1;Name=WP_014081636.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS07740;product=hypothetical protein;protein_id=WP_014081636.1;transl_table=11
NC_015978.1	RefSeq	gene	305584	306957	.	+	.	ID=gene-LSA_RS01525;Name=LSA_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01525;old_locus_tag=LSA_03210
NC_015978.1	Protein Homology	CDS	305584	306957	.	+	0	ID=cds-WP_014081637.1;Parent=gene-LSA_RS01525;Dbxref=Genbank:WP_014081637.1;Name=WP_014081637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009765208.1;locus_tag=LSA_RS01525;product=amino acid permease;protein_id=WP_014081637.1;transl_table=11
NC_015978.1	RefSeq	gene	307058	308002	.	+	.	ID=gene-LSA_RS01530;Name=LSA_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01530;old_locus_tag=LSA_03220
NC_015978.1	Protein Homology	CDS	307058	308002	.	+	0	ID=cds-WP_014081638.1;Parent=gene-LSA_RS01530;Dbxref=Genbank:WP_014081638.1;Name=WP_014081638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022335.1;locus_tag=LSA_RS01530;product=nitronate monooxygenase;protein_id=WP_014081638.1;transl_table=11
NC_015978.1	RefSeq	gene	308040	309362	.	-	.	ID=gene-LSA_RS01535;Name=LSA_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01535;old_locus_tag=LSA_03230
NC_015978.1	Protein Homology	CDS	308040	309362	.	-	0	ID=cds-WP_014081639.1;Parent=gene-LSA_RS01535;Dbxref=Genbank:WP_014081639.1;Name=WP_014081639.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003244819.1;locus_tag=LSA_RS01535;product=amino acid permease;protein_id=WP_014081639.1;transl_table=11
NC_015978.1	RefSeq	gene	309621	310886	.	-	.	ID=gene-LSA_RS01540;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=LSA_RS01540;old_locus_tag=LSA_03240
NC_015978.1	Protein Homology	CDS	309621	310886	.	-	0	ID=cds-WP_041817587.1;Parent=gene-LSA_RS01540;Dbxref=Genbank:WP_041817587.1;Name=WP_041817587.1;Ontology_term=GO:0008150,GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166871.1;locus_tag=LSA_RS01540;product=GTPase HflX;protein_id=WP_041817587.1;transl_table=11
NC_015978.1	RefSeq	gene	310898	311554	.	-	.	ID=gene-LSA_RS01545;Name=LSA_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01545;old_locus_tag=LSA_03250
NC_015978.1	Protein Homology	CDS	310898	311554	.	-	0	ID=cds-WP_041817588.1;Parent=gene-LSA_RS01545;Dbxref=Genbank:WP_041817588.1;Name=WP_041817588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013728590.1;locus_tag=LSA_RS01545;product=histidine phosphatase family protein;protein_id=WP_041817588.1;transl_table=11
NC_015978.1	RefSeq	gene	311673	313982	.	+	.	ID=gene-LSA_RS01550;Name=LSA_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01550;old_locus_tag=LSA_03260
NC_015978.1	Protein Homology	CDS	311673	313982	.	+	0	ID=cds-WP_014081642.1;Parent=gene-LSA_RS01550;Dbxref=Genbank:WP_014081642.1;Name=WP_014081642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022656.1;locus_tag=LSA_RS01550;product=AAA family ATPase;protein_id=WP_014081642.1;transl_table=11
NC_015978.1	RefSeq	gene	313985	314899	.	+	.	ID=gene-LSA_RS01555;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=LSA_RS01555;old_locus_tag=LSA_03270
NC_015978.1	Protein Homology	CDS	313985	314899	.	+	0	ID=cds-WP_014081643.1;Parent=gene-LSA_RS01555;Dbxref=Genbank:WP_014081643.1;Name=WP_014081643.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003641152.1;locus_tag=LSA_RS01555;product=type I pantothenate kinase;protein_id=WP_014081643.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	315053	315943	.	-	.	ID=gene-LSA_RS07405;Name=LSA_RS07405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS07405;partial=true;pseudo=true;start_range=.,315053
NC_015978.1	Protein Homology	CDS	315053	315943	.	-	0	ID=cds-LSA_RS07405;Parent=gene-LSA_RS07405;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003675365.1;locus_tag=LSA_RS07405;partial=true;product=divalent metal cation transporter;pseudo=true;start_range=.,315053;transl_table=11
NC_015978.1	RefSeq	gene	315977	316183	.	-	.	ID=gene-LSA_RS01565;Name=LSA_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01565;old_locus_tag=LSA_03310
NC_015978.1	GeneMarkS-2+	CDS	315977	316183	.	-	0	ID=cds-WP_180337781.1;Parent=gene-LSA_RS01565;Dbxref=Genbank:WP_180337781.1;Name=WP_180337781.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS01565;product=hypothetical protein;protein_id=WP_180337781.1;transl_table=11
NC_015978.1	RefSeq	gene	316307	316735	.	+	.	ID=gene-LSA_RS01570;Name=LSA_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01570;old_locus_tag=LSA_03320
NC_015978.1	Protein Homology	CDS	316307	316735	.	+	0	ID=cds-WP_014081645.1;Parent=gene-LSA_RS01570;Dbxref=Genbank:WP_014081645.1;Name=WP_014081645.1;Ontology_term=GO:0006355,GO:0006825;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA,copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166867.1;locus_tag=LSA_RS01570;product=CopY/TcrY family copper transport repressor;protein_id=WP_014081645.1;transl_table=11
NC_015978.1	RefSeq	gene	316753	318807	.	+	.	ID=gene-LSA_RS01575;Name=LSA_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01575;old_locus_tag=LSA_03330
NC_015978.1	Protein Homology	CDS	316753	318807	.	+	0	ID=cds-WP_225361804.1;Parent=gene-LSA_RS01575;Dbxref=Genbank:WP_225361804.1;Name=WP_225361804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011375152.1;locus_tag=LSA_RS01575;product=copper-translocating P-type ATPase;protein_id=WP_225361804.1;transl_table=11
NC_015978.1	RefSeq	gene	318854	318979	.	+	.	ID=gene-LSA_RS07870;Name=LSA_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07870;old_locus_tag=LSA_03340
NC_015978.1	GeneMarkS-2+	CDS	318854	318979	.	+	0	ID=cds-WP_014081647.1;Parent=gene-LSA_RS07870;Dbxref=Genbank:WP_014081647.1;Name=WP_014081647.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS07870;product=hypothetical protein;protein_id=WP_014081647.1;transl_table=11
NC_015978.1	RefSeq	gene	319106	319993	.	+	.	ID=gene-LSA_RS01580;Name=LSA_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01580;old_locus_tag=LSA_03350
NC_015978.1	Protein Homology	CDS	319106	319993	.	+	0	ID=cds-WP_014081648.1;Parent=gene-LSA_RS01580;Dbxref=Genbank:WP_014081648.1;Name=WP_014081648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010621589.1;locus_tag=LSA_RS01580;product=RluA family pseudouridine synthase;protein_id=WP_014081648.1;transl_table=11
NC_015978.1	RefSeq	gene	320154	320735	.	+	.	ID=gene-LSA_RS01585;Name=LSA_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01585;old_locus_tag=LSA_03370
NC_015978.1	Protein Homology	CDS	320154	320735	.	+	0	ID=cds-WP_103434669.1;Parent=gene-LSA_RS01585;Dbxref=Genbank:WP_103434669.1;Name=WP_103434669.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017970.2;locus_tag=LSA_RS01585;product=DUF1003 domain-containing protein;protein_id=WP_103434669.1;transl_table=11
NC_015978.1	RefSeq	gene	320809	321222	.	+	.	ID=gene-LSA_RS01590;Name=LSA_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01590;old_locus_tag=LSA_03380
NC_015978.1	Protein Homology	CDS	320809	321222	.	+	0	ID=cds-WP_014081651.1;Parent=gene-LSA_RS01590;Dbxref=Genbank:WP_014081651.1;Name=WP_014081651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166863.1;locus_tag=LSA_RS01590;product=hypothetical protein;protein_id=WP_014081651.1;transl_table=11
NC_015978.1	RefSeq	gene	321224	321664	.	+	.	ID=gene-LSA_RS01595;Name=LSA_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01595;old_locus_tag=LSA_03390
NC_015978.1	Protein Homology	CDS	321224	321664	.	+	0	ID=cds-WP_014081652.1;Parent=gene-LSA_RS01595;Dbxref=Genbank:WP_014081652.1;Name=WP_014081652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003643094.1;locus_tag=LSA_RS01595;product=nucleoside 2-deoxyribosyltransferase;protein_id=WP_014081652.1;transl_table=11
NC_015978.1	RefSeq	gene	321699	322604	.	+	.	ID=gene-LSA_RS01600;Name=LSA_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01600;old_locus_tag=LSA_03400
NC_015978.1	Protein Homology	CDS	321699	322604	.	+	0	ID=cds-WP_014081653.1;Parent=gene-LSA_RS01600;Dbxref=Genbank:WP_014081653.1;Name=WP_014081653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022668.1;locus_tag=LSA_RS01600;product=cation diffusion facilitator family transporter;protein_id=WP_014081653.1;transl_table=11
NC_015978.1	RefSeq	gene	322661	323509	.	-	.	ID=gene-LSA_RS01605;Name=LSA_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01605;old_locus_tag=LSA_03410
NC_015978.1	Protein Homology	CDS	322661	323509	.	-	0	ID=cds-WP_258027360.1;Parent=gene-LSA_RS01605;Dbxref=Genbank:WP_258027360.1;Name=WP_258027360.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033516.0;locus_tag=LSA_RS01605;product=IS3 family transposase;protein_id=WP_258027360.1;transl_table=11
NC_015978.1	RefSeq	gene	323521	324060	.	-	.	ID=gene-LSA_RS01610;Name=LSA_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01610;old_locus_tag=LSA_03420
NC_015978.1	Protein Homology	CDS	323521	324060	.	-	0	ID=cds-WP_014081655.1;Parent=gene-LSA_RS01610;Dbxref=Genbank:WP_014081655.1;Name=WP_014081655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014081655.1;locus_tag=LSA_RS01610;product=helix-turn-helix domain-containing protein;protein_id=WP_014081655.1;transl_table=11
NC_015978.1	RefSeq	gene	324147	324494	.	-	.	ID=gene-LSA_RS01615;Name=LSA_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01615;old_locus_tag=LSA_03430
NC_015978.1	Protein Homology	CDS	324147	324494	.	-	0	ID=cds-WP_014081656.1;Parent=gene-LSA_RS01615;Dbxref=Genbank:WP_014081656.1;Name=WP_014081656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022669.1;locus_tag=LSA_RS01615;product=hypothetical protein;protein_id=WP_014081656.1;transl_table=11
NC_015978.1	RefSeq	gene	324650	325426	.	+	.	ID=gene-LSA_RS01620;Name=LSA_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01620;old_locus_tag=LSA_03440
NC_015978.1	Protein Homology	CDS	324650	325426	.	+	0	ID=cds-WP_041818046.1;Parent=gene-LSA_RS01620;Dbxref=Genbank:WP_041818046.1;Name=WP_041818046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022670.1;locus_tag=LSA_RS01620;product=threonine/serine exporter family protein;protein_id=WP_041818046.1;transl_table=11
NC_015978.1	RefSeq	gene	325436	325897	.	+	.	ID=gene-LSA_RS01625;Name=LSA_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01625;old_locus_tag=LSA_03450
NC_015978.1	Protein Homology	CDS	325436	325897	.	+	0	ID=cds-WP_014081658.1;Parent=gene-LSA_RS01625;Dbxref=Genbank:WP_014081658.1;Name=WP_014081658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166856.1;locus_tag=LSA_RS01625;product=threonine/serine exporter family protein;protein_id=WP_014081658.1;transl_table=11
NC_015978.1	RefSeq	gene	325965	326504	.	+	.	ID=gene-LSA_RS07225;Name=LSA_RS07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07225;old_locus_tag=LSA_03460
NC_015978.1	Protein Homology	CDS	325965	326504	.	+	0	ID=cds-WP_014081659.1;Parent=gene-LSA_RS07225;Dbxref=Genbank:WP_014081659.1;Name=WP_014081659.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02937.1;locus_tag=LSA_RS07225;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_014081659.1;transl_table=11
NC_015978.1	RefSeq	gene	326582	326785	.	+	.	ID=gene-LSA_RS01635;Name=LSA_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01635;old_locus_tag=LSA_03470
NC_015978.1	Protein Homology	CDS	326582	326785	.	+	0	ID=cds-WP_014081660.1;Parent=gene-LSA_RS01635;Dbxref=Genbank:WP_014081660.1;Name=WP_014081660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014081660.1;locus_tag=LSA_RS01635;product=hypothetical protein;protein_id=WP_014081660.1;transl_table=11
NC_015978.1	RefSeq	gene	326800	327033	.	+	.	ID=gene-LSA_RS01640;Name=LSA_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01640;old_locus_tag=LSA_03480
NC_015978.1	Protein Homology	CDS	326800	327033	.	+	0	ID=cds-WP_014081661.1;Parent=gene-LSA_RS01640;Dbxref=Genbank:WP_014081661.1;Name=WP_014081661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014081665.1;locus_tag=LSA_RS01640;product=DUF2922 domain-containing protein;protein_id=WP_014081661.1;transl_table=11
NC_015978.1	RefSeq	gene	327170	327949	.	+	.	ID=gene-LSA_RS07410;Name=LSA_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07410;old_locus_tag=LSA_03490
NC_015978.1	Protein Homology	CDS	327170	327949	.	+	0	ID=cds-WP_014081662.1;Parent=gene-LSA_RS07410;Dbxref=Genbank:WP_014081662.1;Name=WP_014081662.1;Ontology_term=GO:0006207,GO:0004590;gbkey=CDS;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: protein motif:HMM:NF013539.2;locus_tag=LSA_RS07410;product=orotidine 5'-phosphate decarboxylase;protein_id=WP_014081662.1;transl_table=11
NC_015978.1	RefSeq	gene	328243	328446	.	+	.	ID=gene-LSA_RS01655;Name=LSA_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01655;old_locus_tag=LSA_03510
NC_015978.1	Protein Homology	CDS	328243	328446	.	+	0	ID=cds-WP_014081664.1;Parent=gene-LSA_RS01655;Dbxref=Genbank:WP_014081664.1;Name=WP_014081664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014081660.1;locus_tag=LSA_RS01655;product=hypothetical protein;protein_id=WP_014081664.1;transl_table=11
NC_015978.1	RefSeq	gene	328461	328694	.	+	.	ID=gene-LSA_RS01660;Name=LSA_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01660;old_locus_tag=LSA_03520
NC_015978.1	Protein Homology	CDS	328461	328694	.	+	0	ID=cds-WP_014081665.1;Parent=gene-LSA_RS01660;Dbxref=Genbank:WP_014081665.1;Name=WP_014081665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014081661.1;locus_tag=LSA_RS01660;product=DUF2922 domain-containing protein;protein_id=WP_014081665.1;transl_table=11
NC_015978.1	RefSeq	gene	328969	329691	.	-	.	ID=gene-LSA_RS01665;Name=LSA_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01665;old_locus_tag=LSA_03530
NC_015978.1	Protein Homology	CDS	328969	329691	.	-	0	ID=cds-WP_146038928.1;Parent=gene-LSA_RS01665;Dbxref=Genbank:WP_146038928.1;Name=WP_146038928.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022633.2;locus_tag=LSA_RS01665;product=DUF2971 domain-containing protein;protein_id=WP_146038928.1;transl_table=11
NC_015978.1	RefSeq	gene	330016	330918	.	+	.	ID=gene-LSA_RS01670;Name=LSA_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01670;old_locus_tag=LSA_03540
NC_015978.1	Protein Homology	CDS	330016	330918	.	+	0	ID=cds-WP_041818053.1;Parent=gene-LSA_RS01670;Dbxref=Genbank:WP_041818053.1;Name=WP_041818053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003605520.1;locus_tag=LSA_RS01670;product=hypothetical protein;protein_id=WP_041818053.1;transl_table=11
NC_015978.1	RefSeq	gene	330918	334166	.	+	.	ID=gene-LSA_RS01675;Name=LSA_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01675;old_locus_tag=LSA_03550
NC_015978.1	Protein Homology	CDS	330918	334166	.	+	0	ID=cds-WP_014081668.1;Parent=gene-LSA_RS01675;Dbxref=Genbank:WP_014081668.1;Name=WP_014081668.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369627.1;locus_tag=LSA_RS01675;product=DEAD/DEAH box helicase family protein;protein_id=WP_014081668.1;transl_table=11
NC_015978.1	RefSeq	gene	334179	334301	.	+	.	ID=gene-LSA_RS07415;Name=LSA_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07415;old_locus_tag=LSA_03560
NC_015978.1	Protein Homology	CDS	334179	334301	.	+	0	ID=cds-WP_014081669.1;Parent=gene-LSA_RS07415;Dbxref=Genbank:WP_014081669.1;Name=WP_014081669.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019291.2;locus_tag=LSA_RS07415;product=Eco57I restriction-modification methylase domain-containing protein;protein_id=WP_014081669.1;transl_table=11
NC_015978.1	RefSeq	gene	334384	334782	.	+	.	ID=gene-LSA_RS01680;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LSA_RS01680;old_locus_tag=LSA_03570
NC_015978.1	Protein Homology	CDS	334384	334782	.	+	0	ID=cds-WP_014081459.1-5;Parent=gene-LSA_RS01680;Dbxref=Genbank:WP_014081459.1;Name=WP_014081459.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000762755.1;locus_tag=LSA_RS01680;product=IS200/IS605 family transposase;protein_id=WP_014081459.1;transl_table=11
NC_015978.1	RefSeq	gene	334782	335957	.	+	.	ID=gene-LSA_RS01685;Name=LSA_RS01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01685;old_locus_tag=LSA_03580
NC_015978.1	Protein Homology	CDS	334782	335957	.	+	0	ID=cds-WP_014081481.1-3;Parent=gene-LSA_RS01685;Dbxref=Genbank:WP_014081481.1;Name=WP_014081481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003664510.1;locus_tag=LSA_RS01685;product=RNA-guided endonuclease TnpB family protein;protein_id=WP_014081481.1;transl_table=11
NC_015978.1	RefSeq	gene	336121	337071	.	+	.	ID=gene-LSA_RS01690;Name=LSA_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01690;old_locus_tag=LSA_03590
NC_015978.1	GeneMarkS-2+	CDS	336121	337071	.	+	0	ID=cds-WP_041817591.1;Parent=gene-LSA_RS01690;Dbxref=Genbank:WP_041817591.1;Name=WP_041817591.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS01690;product=hypothetical protein;protein_id=WP_041817591.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	337228	338315	.	+	.	ID=gene-LSA_RS01700;Name=LSA_RS01700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS01700;pseudo=true
NC_015978.1	Protein Homology	CDS	337228	338315	.	+	0	ID=cds-LSA_RS01700;Parent=gene-LSA_RS01700;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558186.1;locus_tag=LSA_RS01700;product=IS3 family transposase;pseudo=true;transl_table=11
NC_015978.1	RefSeq	gene	338371	338802	.	+	.	ID=gene-LSA_RS01705;Name=LSA_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01705;old_locus_tag=LSA_03630
NC_015978.1	GeneMarkS-2+	CDS	338371	338802	.	+	0	ID=cds-WP_014081672.1;Parent=gene-LSA_RS01705;Dbxref=Genbank:WP_014081672.1;Name=WP_014081672.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS01705;product=hypothetical protein;protein_id=WP_014081672.1;transl_table=11
NC_015978.1	RefSeq	gene	339305	340135	.	-	.	ID=gene-LSA_RS01710;Name=LSA_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01710;old_locus_tag=LSA_03640
NC_015978.1	Protein Homology	CDS	339305	340135	.	-	0	ID=cds-WP_014081673.1;Parent=gene-LSA_RS01710;Dbxref=Genbank:WP_014081673.1;Name=WP_014081673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166359.1;locus_tag=LSA_RS01710;product=membrane protein;protein_id=WP_014081673.1;transl_table=11
NC_015978.1	RefSeq	gene	340230	340303	.	-	.	ID=gene-LSA_RS01715;Name=LSA_RS01715;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS01715;old_locus_tag=LSA_R00100
NC_015978.1	tRNAscan-SE	tRNA	340230	340303	.	-	.	ID=rna-LSA_RS01715;Parent=gene-LSA_RS01715;anticodon=(pos:complement(340267..340269));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS01715;product=tRNA-Asn
NC_015978.1	tRNAscan-SE	exon	340230	340303	.	-	.	ID=exon-LSA_RS01715-1;Parent=rna-LSA_RS01715;anticodon=(pos:complement(340267..340269));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS01715;product=tRNA-Asn
NC_015978.1	RefSeq	gene	340704	342230	.	+	.	ID=gene-LSA_RS01720;Name=LSA_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01720;old_locus_tag=LSA_03650
NC_015978.1	Protein Homology	CDS	340704	342230	.	+	0	ID=cds-WP_014081674.1;Parent=gene-LSA_RS01720;Dbxref=Genbank:WP_014081674.1;Name=WP_014081674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022357.1;locus_tag=LSA_RS01720;product=ClC family H(+)/Cl(-) exchange transporter;protein_id=WP_014081674.1;transl_table=11
NC_015978.1	RefSeq	gene	342242	342793	.	+	.	ID=gene-LSA_RS01725;Name=LSA_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01725;old_locus_tag=LSA_03660
NC_015978.1	GeneMarkS-2+	CDS	342242	342793	.	+	0	ID=cds-WP_014081675.1;Parent=gene-LSA_RS01725;Dbxref=Genbank:WP_014081675.1;Name=WP_014081675.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS01725;product=hypothetical protein;protein_id=WP_014081675.1;transl_table=11
NC_015978.1	RefSeq	gene	342828	343439	.	-	.	ID=gene-LSA_RS01730;Name=LSA_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01730;old_locus_tag=LSA_03670
NC_015978.1	Protein Homology	CDS	342828	343439	.	-	0	ID=cds-WP_041817593.1;Parent=gene-LSA_RS01730;Dbxref=Genbank:WP_041817593.1;Name=WP_041817593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167007.1;locus_tag=LSA_RS01730;product=SGNH/GDSL hydrolase family protein;protein_id=WP_041817593.1;transl_table=11
NC_015978.1	RefSeq	gene	343570	344382	.	+	.	ID=gene-LSA_RS01735;Name=LSA_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01735;old_locus_tag=LSA_03680
NC_015978.1	Protein Homology	CDS	343570	344382	.	+	0	ID=cds-WP_014081676.1;Parent=gene-LSA_RS01735;Dbxref=Genbank:WP_014081676.1;Name=WP_014081676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167008.1;locus_tag=LSA_RS01735;product=hypothetical protein;protein_id=WP_014081676.1;transl_table=11
NC_015978.1	RefSeq	gene	344426	345688	.	+	.	ID=gene-LSA_RS01740;Name=LSA_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01740;old_locus_tag=LSA_03690
NC_015978.1	Protein Homology	CDS	344426	345688	.	+	0	ID=cds-WP_014081677.1;Parent=gene-LSA_RS01740;Dbxref=Genbank:WP_014081677.1;Name=WP_014081677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167009.1;locus_tag=LSA_RS01740;product=nucleoside transporter;protein_id=WP_014081677.1;transl_table=11
NC_015978.1	RefSeq	gene	345763	346170	.	+	.	ID=gene-LSA_RS01745;Name=LSA_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01745;old_locus_tag=LSA_03700
NC_015978.1	Protein Homology	CDS	345763	346170	.	+	0	ID=cds-WP_225362383.1;Parent=gene-LSA_RS01745;Dbxref=Genbank:WP_225362383.1;Name=WP_225362383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003557265.1;locus_tag=LSA_RS01745;product=tautomerase family protein;protein_id=WP_225362383.1;transl_table=11
NC_015978.1	RefSeq	gene	346167	347084	.	+	.	ID=gene-LSA_RS01750;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=LSA_RS01750;old_locus_tag=LSA_03710
NC_015978.1	Protein Homology	CDS	346167	347084	.	+	0	ID=cds-WP_103434637.1;Parent=gene-LSA_RS01750;Dbxref=Genbank:WP_103434637.1;Name=WP_103434637.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008855449.1;locus_tag=LSA_RS01750;product=ribonucleoside hydrolase RihC;protein_id=WP_103434637.1;transl_table=11
NC_015978.1	RefSeq	gene	347213	347935	.	+	.	ID=gene-LSA_RS01755;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=LSA_RS01755;old_locus_tag=LSA_03720
NC_015978.1	Protein Homology	CDS	347213	347935	.	+	0	ID=cds-WP_014081680.1;Parent=gene-LSA_RS01755;Dbxref=Genbank:WP_014081680.1;Name=WP_014081680.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168,GO:0005575;gbkey=CDS;gene=rsmG;go_component=cellular_component|0005575||IEA;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476459.1;locus_tag=LSA_RS01755;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_014081680.1;transl_table=11
NC_015978.1	RefSeq	gene	347951	348718	.	+	.	ID=gene-LSA_RS01760;Name=LSA_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01760;old_locus_tag=LSA_03730
NC_015978.1	Protein Homology	CDS	347951	348718	.	+	0	ID=cds-WP_014081681.1;Parent=gene-LSA_RS01760;Dbxref=Genbank:WP_014081681.1;Name=WP_014081681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003558200.1;locus_tag=LSA_RS01760;product=AAA family ATPase;protein_id=WP_014081681.1;transl_table=11
NC_015978.1	RefSeq	gene	348708	349589	.	+	.	ID=gene-LSA_RS01765;Name=LSA_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01765;old_locus_tag=LSA_03740
NC_015978.1	Protein Homology	CDS	348708	349589	.	+	0	ID=cds-WP_014081682.1;Parent=gene-LSA_RS01765;Dbxref=Genbank:WP_014081682.1;Name=WP_014081682.1;Ontology_term=GO:0000910,GO:0007059,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cytokinesis|0000910||IEA,chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008855454.1;locus_tag=LSA_RS01765;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_014081682.1;transl_table=11
NC_015978.1	RefSeq	gene	349601	349789	.	+	.	ID=gene-LSA_RS01770;Name=LSA_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01770;old_locus_tag=LSA_03750
NC_015978.1	Protein Homology	CDS	349601	349789	.	+	0	ID=cds-WP_014081683.1;Parent=gene-LSA_RS01770;Dbxref=Genbank:WP_014081683.1;Name=WP_014081683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022893.1;locus_tag=LSA_RS01770;product=DUF951 domain-containing protein;protein_id=WP_014081683.1;transl_table=11
NC_015978.1	RefSeq	gene	349808	350908	.	+	.	ID=gene-LSA_RS01775;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=LSA_RS01775;old_locus_tag=LSA_03760
NC_015978.1	Protein Homology	CDS	349808	350908	.	+	0	ID=cds-WP_014081684.1;Parent=gene-LSA_RS01775;Dbxref=Genbank:WP_014081684.1;Name=WP_014081684.1;Ontology_term=GO:0005525;gbkey=CDS;gene=ychF;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003558203.1;locus_tag=LSA_RS01775;product=redox-regulated ATPase YchF;protein_id=WP_014081684.1;transl_table=11
NC_015978.1	RefSeq	gene	350917	351651	.	+	.	ID=gene-LSA_RS01780;Name=LSA_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01780;old_locus_tag=LSA_03770
NC_015978.1	Protein Homology	CDS	350917	351651	.	+	0	ID=cds-WP_014081685.1;Parent=gene-LSA_RS01780;Dbxref=Genbank:WP_014081685.1;Name=WP_014081685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167017.1;locus_tag=LSA_RS01780;product=DUF1129 family protein;protein_id=WP_014081685.1;transl_table=11
NC_015978.1	RefSeq	gene	351789	352475	.	+	.	ID=gene-LSA_RS01785;Name=LSA_RS01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01785;old_locus_tag=LSA_03780
NC_015978.1	Protein Homology	CDS	351789	352475	.	+	0	ID=cds-WP_014081686.1;Parent=gene-LSA_RS01785;Dbxref=Genbank:WP_014081686.1;Name=WP_014081686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167018.1;locus_tag=LSA_RS01785;product=response regulator transcription factor;protein_id=WP_014081686.1;transl_table=11
NC_015978.1	RefSeq	gene	352478	353635	.	+	.	ID=gene-LSA_RS01790;Name=LSA_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01790;old_locus_tag=LSA_03790
NC_015978.1	Protein Homology	CDS	352478	353635	.	+	0	ID=cds-WP_014081687.1;Parent=gene-LSA_RS01790;Dbxref=Genbank:WP_014081687.1;Name=WP_014081687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167019.1;locus_tag=LSA_RS01790;product=HAMP domain-containing histidine kinase;protein_id=WP_014081687.1;transl_table=11
NC_015978.1	RefSeq	gene	353825	354595	.	+	.	ID=gene-LSA_RS01795;Name=LSA_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01795;old_locus_tag=LSA_03800
NC_015978.1	Protein Homology	CDS	353825	354595	.	+	0	ID=cds-WP_041818054.1;Parent=gene-LSA_RS01795;Dbxref=Genbank:WP_041818054.1;Name=WP_041818054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022885.1;locus_tag=LSA_RS01795;product=AzlC family ABC transporter permease;protein_id=WP_041818054.1;transl_table=11
NC_015978.1	RefSeq	gene	354610	354945	.	+	.	ID=gene-LSA_RS01800;Name=LSA_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01800;old_locus_tag=LSA_03810
NC_015978.1	Protein Homology	CDS	354610	354945	.	+	0	ID=cds-WP_041817595.1;Parent=gene-LSA_RS01800;Dbxref=Genbank:WP_041817595.1;Name=WP_041817595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008210987.1;locus_tag=LSA_RS01800;product=AzlD domain-containing protein;protein_id=WP_041817595.1;transl_table=11
NC_015978.1	RefSeq	gene	355077	355907	.	+	.	ID=gene-LSA_RS01805;Name=LSA_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01805;old_locus_tag=LSA_03820
NC_015978.1	GeneMarkS-2+	CDS	355077	355907	.	+	0	ID=cds-WP_041817596.1;Parent=gene-LSA_RS01805;Dbxref=Genbank:WP_041817596.1;Name=WP_041817596.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS01805;product=hypothetical protein;protein_id=WP_041817596.1;transl_table=11
NC_015978.1	RefSeq	gene	355928	357007	.	+	.	ID=gene-LSA_RS01810;Name=LSA_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01810;old_locus_tag=LSA_03830
NC_015978.1	Protein Homology	CDS	355928	357007	.	+	0	ID=cds-WP_014081690.1;Parent=gene-LSA_RS01810;Dbxref=Genbank:WP_014081690.1;Name=WP_014081690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022881.1;locus_tag=LSA_RS01810;product=AI-2E family transporter;protein_id=WP_014081690.1;transl_table=11
NC_015978.1	RefSeq	gene	357064	357762	.	+	.	ID=gene-LSA_RS01815;Name=LSA_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01815;old_locus_tag=LSA_03840
NC_015978.1	Protein Homology	CDS	357064	357762	.	+	0	ID=cds-WP_014081691.1;Parent=gene-LSA_RS01815;Dbxref=Genbank:WP_014081691.1;Name=WP_014081691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022879.1;locus_tag=LSA_RS01815;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_014081691.1;transl_table=11
NC_015978.1	RefSeq	gene	357897	359354	.	+	.	ID=gene-LSA_RS01820;Name=LSA_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01820;old_locus_tag=LSA_03850
NC_015978.1	Protein Homology	CDS	357897	359354	.	+	0	ID=cds-WP_041817597.1;Parent=gene-LSA_RS01820;Dbxref=Genbank:WP_041817597.1;Name=WP_041817597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022876.1;locus_tag=LSA_RS01820;product=multidrug efflux MFS transporter;protein_id=WP_041817597.1;transl_table=11
NC_015978.1	RefSeq	gene	359374	360129	.	+	.	ID=gene-LSA_RS01825;Name=LSA_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01825;old_locus_tag=LSA_03860
NC_015978.1	Protein Homology	CDS	359374	360129	.	+	0	ID=cds-WP_014081693.1;Parent=gene-LSA_RS01825;Dbxref=Genbank:WP_014081693.1;Name=WP_014081693.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027395.2;locus_tag=LSA_RS01825;product=DUF4811 domain-containing protein;protein_id=WP_014081693.1;transl_table=11
NC_015978.1	RefSeq	gene	360531	362108	.	+	.	ID=gene-LSA_RS01830;Name=LSA_RS01830;gbkey=Gene;gene_biotype=rRNA;locus_tag=LSA_RS01830;old_locus_tag=LSA_R00110
NC_015978.1	cmsearch	rRNA	360531	362108	.	+	.	ID=rna-LSA_RS01830;Parent=gene-LSA_RS01830;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS01830;product=16S ribosomal RNA
NC_015978.1	cmsearch	exon	360531	362108	.	+	.	ID=exon-LSA_RS01830-1;Parent=rna-LSA_RS01830;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS01830;product=16S ribosomal RNA
NC_015978.1	RefSeq	gene	362176	362248	.	+	.	ID=gene-LSA_RS01835;Name=LSA_RS01835;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS01835;old_locus_tag=LSA_R00120
NC_015978.1	tRNAscan-SE	tRNA	362176	362248	.	+	.	ID=rna-LSA_RS01835;Parent=gene-LSA_RS01835;anticodon=(pos:362209..362211);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS01835;product=tRNA-Ala
NC_015978.1	tRNAscan-SE	exon	362176	362248	.	+	.	ID=exon-LSA_RS01835-1;Parent=rna-LSA_RS01835;anticodon=(pos:362209..362211);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS01835;product=tRNA-Ala
NC_015978.1	RefSeq	gene	362419	365334	.	+	.	ID=gene-LSA_RS01840;Name=LSA_RS01840;gbkey=Gene;gene_biotype=rRNA;locus_tag=LSA_RS01840;old_locus_tag=LSA_R00130
NC_015978.1	cmsearch	rRNA	362419	365334	.	+	.	ID=rna-LSA_RS01840;Parent=gene-LSA_RS01840;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS01840;product=23S ribosomal RNA
NC_015978.1	cmsearch	exon	362419	365334	.	+	.	ID=exon-LSA_RS01840-1;Parent=rna-LSA_RS01840;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS01840;product=23S ribosomal RNA
NC_015978.1	RefSeq	gene	365418	365534	.	+	.	ID=gene-LSA_RS01845;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LSA_RS01845;old_locus_tag=LSA_R00140
NC_015978.1	cmsearch	rRNA	365418	365534	.	+	.	ID=rna-LSA_RS01845;Parent=gene-LSA_RS01845;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS01845;product=5S ribosomal RNA
NC_015978.1	cmsearch	exon	365418	365534	.	+	.	ID=exon-LSA_RS01845-1;Parent=rna-LSA_RS01845;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS01845;product=5S ribosomal RNA
NC_015978.1	RefSeq	gene	365677	366549	.	+	.	ID=gene-LSA_RS01850;Name=LSA_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01850;old_locus_tag=LSA_03870
NC_015978.1	Protein Homology	CDS	365677	366549	.	+	0	ID=cds-WP_041817599.1;Parent=gene-LSA_RS01850;Dbxref=Genbank:WP_041817599.1;Name=WP_041817599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021438.1;locus_tag=LSA_RS01850;product=aldose 1-epimerase family protein;protein_id=WP_041817599.1;transl_table=11
NC_015978.1	RefSeq	gene	367307	368884	.	+	.	ID=gene-LSA_RS01855;Name=LSA_RS01855;gbkey=Gene;gene_biotype=rRNA;locus_tag=LSA_RS01855;old_locus_tag=LSA_R00150
NC_015978.1	cmsearch	rRNA	367307	368884	.	+	.	ID=rna-LSA_RS01855;Parent=gene-LSA_RS01855;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS01855;product=16S ribosomal RNA
NC_015978.1	cmsearch	exon	367307	368884	.	+	.	ID=exon-LSA_RS01855-1;Parent=rna-LSA_RS01855;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS01855;product=16S ribosomal RNA
NC_015978.1	RefSeq	gene	368952	369024	.	+	.	ID=gene-LSA_RS01860;Name=LSA_RS01860;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS01860;old_locus_tag=LSA_R00160
NC_015978.1	tRNAscan-SE	tRNA	368952	369024	.	+	.	ID=rna-LSA_RS01860;Parent=gene-LSA_RS01860;anticodon=(pos:368985..368987);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS01860;product=tRNA-Ala
NC_015978.1	tRNAscan-SE	exon	368952	369024	.	+	.	ID=exon-LSA_RS01860-1;Parent=rna-LSA_RS01860;anticodon=(pos:368985..368987);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS01860;product=tRNA-Ala
NC_015978.1	RefSeq	gene	369195	372110	.	+	.	ID=gene-LSA_RS01865;Name=LSA_RS01865;gbkey=Gene;gene_biotype=rRNA;locus_tag=LSA_RS01865;old_locus_tag=LSA_R00170
NC_015978.1	cmsearch	rRNA	369195	372110	.	+	.	ID=rna-LSA_RS01865;Parent=gene-LSA_RS01865;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS01865;product=23S ribosomal RNA
NC_015978.1	cmsearch	exon	369195	372110	.	+	.	ID=exon-LSA_RS01865-1;Parent=rna-LSA_RS01865;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS01865;product=23S ribosomal RNA
NC_015978.1	RefSeq	gene	372194	372310	.	+	.	ID=gene-LSA_RS01870;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LSA_RS01870;old_locus_tag=LSA_R00180
NC_015978.1	cmsearch	rRNA	372194	372310	.	+	.	ID=rna-LSA_RS01870;Parent=gene-LSA_RS01870;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS01870;product=5S ribosomal RNA
NC_015978.1	cmsearch	exon	372194	372310	.	+	.	ID=exon-LSA_RS01870-1;Parent=rna-LSA_RS01870;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS01870;product=5S ribosomal RNA
NC_015978.1	RefSeq	gene	372388	372460	.	+	.	ID=gene-LSA_RS01875;Name=LSA_RS01875;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS01875;old_locus_tag=LSA_R00190
NC_015978.1	tRNAscan-SE	tRNA	372388	372460	.	+	.	ID=rna-LSA_RS01875;Parent=gene-LSA_RS01875;anticodon=(pos:372421..372423);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS01875;product=tRNA-Thr
NC_015978.1	tRNAscan-SE	exon	372388	372460	.	+	.	ID=exon-LSA_RS01875-1;Parent=rna-LSA_RS01875;anticodon=(pos:372421..372423);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS01875;product=tRNA-Thr
NC_015978.1	RefSeq	gene	372613	372981	.	+	.	ID=gene-LSA_RS01880;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=LSA_RS01880;old_locus_tag=LSA_03880
NC_015978.1	Protein Homology	CDS	372613	372981	.	+	0	ID=cds-WP_041817601.1;Parent=gene-LSA_RS01880;Dbxref=Genbank:WP_041817601.1;Name=WP_041817601.1;Ontology_term=GO:0034220,GO:0008381,GO:0016021;gbkey=CDS;gene=mscL;go_component=integral component of membrane|0016021||IEA;go_function=mechanosensitive ion channel activity|0008381||IEA;go_process=ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004045410.1;locus_tag=LSA_RS01880;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_041817601.1;transl_table=11
NC_015978.1	RefSeq	gene	372994	375291	.	-	.	ID=gene-LSA_RS01885;Name=LSA_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01885;old_locus_tag=LSA_03890
NC_015978.1	Protein Homology	CDS	372994	375291	.	-	0	ID=cds-WP_041817603.1;Parent=gene-LSA_RS01885;Dbxref=Genbank:WP_041817603.1;Name=WP_041817603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014940264.1;locus_tag=LSA_RS01885;product=AAA family ATPase;protein_id=WP_041817603.1;transl_table=11
NC_015978.1	RefSeq	gene	375598	376617	.	+	.	ID=gene-LSA_RS01890;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=LSA_RS01890;old_locus_tag=LSA_03900
NC_015978.1	Protein Homology	CDS	375598	376617	.	+	0	ID=cds-WP_014081697.1;Parent=gene-LSA_RS01890;Dbxref=Genbank:WP_014081697.1;Name=WP_014081697.1;Ontology_term=GO:0006436,GO:0004830,GO:0005737;gbkey=CDS;gene=trpS;go_component=cytoplasm|0005737||IEA;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013728389.1;locus_tag=LSA_RS01890;product=tryptophan--tRNA ligase;protein_id=WP_014081697.1;transl_table=11
NC_015978.1	RefSeq	gene	376645	377568	.	+	.	ID=gene-LSA_RS01895;Name=LSA_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01895;old_locus_tag=LSA_03910
NC_015978.1	Protein Homology	CDS	376645	377568	.	+	0	ID=cds-WP_041817605.1;Parent=gene-LSA_RS01895;Dbxref=Genbank:WP_041817605.1;Name=WP_041817605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013728388.1;locus_tag=LSA_RS01895;product=exopolyphosphatase;protein_id=WP_041817605.1;transl_table=11
NC_015978.1	RefSeq	gene	377588	378844	.	+	.	ID=gene-LSA_RS01900;Name=LSA_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01900;old_locus_tag=LSA_03920
NC_015978.1	Protein Homology	CDS	377588	378844	.	+	0	ID=cds-WP_014081699.1;Parent=gene-LSA_RS01900;Dbxref=Genbank:WP_014081699.1;Name=WP_014081699.1;Ontology_term=GO:0016054,GO:0004420;gbkey=CDS;go_function=hydroxymethylglutaryl-CoA reductase (NADPH) activity|0004420||IEA;go_process=organic acid catabolic process|0016054||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167349.1;locus_tag=LSA_RS01900;product=hydroxymethylglutaryl-CoA reductase%2C degradative;protein_id=WP_014081699.1;transl_table=11
NC_015978.1	RefSeq	gene	378846	379808	.	+	.	ID=gene-LSA_RS01905;Name=LSA_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01905;old_locus_tag=LSA_03930
NC_015978.1	Protein Homology	CDS	378846	379808	.	+	0	ID=cds-WP_014081700.1;Parent=gene-LSA_RS01905;Dbxref=Genbank:WP_014081700.1;Name=WP_014081700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167348.1;locus_tag=LSA_RS01905;product=hypothetical protein;protein_id=WP_014081700.1;transl_table=11
NC_015978.1	RefSeq	gene	379822	380532	.	+	.	ID=gene-LSA_RS01910;Name=LSA_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01910;old_locus_tag=LSA_03940
NC_015978.1	Protein Homology	CDS	379822	380532	.	+	0	ID=cds-WP_014081701.1;Parent=gene-LSA_RS01910;Dbxref=Genbank:WP_014081701.1;Name=WP_014081701.1;Ontology_term=GO:0034979,GO:0051287,GO:0070403;gbkey=CDS;go_function=NAD-dependent protein deacetylase activity|0034979||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008210623.1;locus_tag=LSA_RS01910;product=NAD-dependent protein deacylase;protein_id=WP_014081701.1;transl_table=11
NC_015978.1	RefSeq	gene	380535	381371	.	+	.	ID=gene-LSA_RS01915;Name=LSA_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01915;old_locus_tag=LSA_03950
NC_015978.1	Protein Homology	CDS	380535	381371	.	+	0	ID=cds-WP_014081702.1;Parent=gene-LSA_RS01915;Dbxref=Genbank:WP_014081702.1;Name=WP_014081702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167346.1;locus_tag=LSA_RS01915;product=DUF72 domain-containing protein;protein_id=WP_014081702.1;transl_table=11
NC_015978.1	RefSeq	gene	381444	383486	.	+	.	ID=gene-LSA_RS01920;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=LSA_RS01920;old_locus_tag=LSA_03960
NC_015978.1	Protein Homology	CDS	381444	383486	.	+	0	ID=cds-WP_041817606.1;Parent=gene-LSA_RS01920;Dbxref=Genbank:WP_041817606.1;Name=WP_041817606.1;Ontology_term=GO:0006431,GO:0000049,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=tRNA binding|0000049||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167345.1;locus_tag=LSA_RS01920;product=methionine--tRNA ligase;protein_id=WP_041817606.1;transl_table=11
NC_015978.1	RefSeq	gene	383546	384319	.	+	.	ID=gene-LSA_RS01925;Name=LSA_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01925;old_locus_tag=LSA_03970
NC_015978.1	Protein Homology	CDS	383546	384319	.	+	0	ID=cds-WP_041817607.1;Parent=gene-LSA_RS01925;Dbxref=Genbank:WP_041817607.1;Name=WP_041817607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008857645.1;locus_tag=LSA_RS01925;product=TatD family hydrolase;protein_id=WP_041817607.1;transl_table=11
NC_015978.1	RefSeq	gene	384320	384868	.	+	.	ID=gene-LSA_RS01930;Name=rnmV;gbkey=Gene;gene=rnmV;gene_biotype=protein_coding;locus_tag=LSA_RS01930;old_locus_tag=LSA_03980
NC_015978.1	Protein Homology	CDS	384320	384868	.	+	0	ID=cds-WP_014081705.1;Parent=gene-LSA_RS01930;Dbxref=Genbank:WP_014081705.1;Name=WP_014081705.1;Ontology_term=GO:0006364,GO:0043822;gbkey=CDS;gene=rnmV;go_function=ribonuclease M5 activity|0043822||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003554969.1;locus_tag=LSA_RS01930;product=ribonuclease M5;protein_id=WP_014081705.1;transl_table=11
NC_015978.1	RefSeq	gene	384879	385766	.	+	.	ID=gene-LSA_RS01935;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=LSA_RS01935;old_locus_tag=LSA_03990
NC_015978.1	Protein Homology	CDS	384879	385766	.	+	0	ID=cds-WP_014081706.1;Parent=gene-LSA_RS01935;Dbxref=Genbank:WP_014081706.1;Name=WP_014081706.1;Ontology_term=GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014940256.1;locus_tag=LSA_RS01935;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_014081706.1;transl_table=11
NC_015978.1	RefSeq	gene	385828	386061	.	+	.	ID=gene-LSA_RS01940;Name=LSA_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01940;old_locus_tag=LSA_04000
NC_015978.1	Protein Homology	CDS	385828	386061	.	+	0	ID=cds-WP_014081707.1;Parent=gene-LSA_RS01940;Dbxref=Genbank:WP_014081707.1;Name=WP_014081707.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018016.2;locus_tag=LSA_RS01940;product=Veg family protein;protein_id=WP_014081707.1;transl_table=11
NC_015978.1	RefSeq	gene	386136	386825	.	+	.	ID=gene-LSA_RS01945;Name=LSA_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01945;old_locus_tag=LSA_04010
NC_015978.1	Protein Homology	CDS	386136	386825	.	+	0	ID=cds-WP_014081708.1;Parent=gene-LSA_RS01945;Dbxref=Genbank:WP_014081708.1;Name=WP_014081708.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020281959.1;locus_tag=LSA_RS01945;product=ATP-binding cassette domain-containing protein;protein_id=WP_014081708.1;transl_table=11
NC_015978.1	RefSeq	gene	386827	387624	.	+	.	ID=gene-LSA_RS01950;Name=LSA_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01950;old_locus_tag=LSA_04020
NC_015978.1	Protein Homology	CDS	386827	387624	.	+	0	ID=cds-WP_041817609.1;Parent=gene-LSA_RS01950;Dbxref=Genbank:WP_041817609.1;Name=WP_041817609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003671302.1;locus_tag=LSA_RS01950;product=metal ABC transporter permease;protein_id=WP_041817609.1;transl_table=11
NC_015978.1	RefSeq	gene	387755	388585	.	+	.	ID=gene-LSA_RS01955;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=LSA_RS01955;old_locus_tag=LSA_04030
NC_015978.1	Protein Homology	CDS	387755	388585	.	+	0	ID=cds-WP_014081710.1;Parent=gene-LSA_RS01955;Dbxref=Genbank:WP_014081710.1;Name=WP_014081710.1;Ontology_term=GO:0006355,GO:0009116,GO:0045892,GO:0045982,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,nucleoside metabolic process|0009116||IEA,negative regulation of DNA-templated transcription|0045892||IEA,negative regulation of purine nucleobase metabolic process|0045982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010623205.1;locus_tag=LSA_RS01955;product=pur operon repressor;protein_id=WP_014081710.1;transl_table=11
NC_015978.1	RefSeq	gene	388595	389974	.	+	.	ID=gene-LSA_RS01960;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=LSA_RS01960;old_locus_tag=LSA_04040
NC_015978.1	Protein Homology	CDS	388595	389974	.	+	0	ID=cds-WP_014081711.1;Parent=gene-LSA_RS01960;Dbxref=Genbank:WP_014081711.1;Name=WP_014081711.1;Ontology_term=GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011667259.1;locus_tag=LSA_RS01960;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_014081711.1;transl_table=11
NC_015978.1	RefSeq	gene	390046	391050	.	+	.	ID=gene-LSA_RS01965;Name=LSA_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01965;old_locus_tag=LSA_04050
NC_015978.1	Protein Homology	CDS	390046	391050	.	+	0	ID=cds-WP_014081712.1;Parent=gene-LSA_RS01965;Dbxref=Genbank:WP_014081712.1;Name=WP_014081712.1;Ontology_term=GO:0009156,GO:0004749;gbkey=CDS;go_function=ribose phosphate diphosphokinase activity|0004749||IEA;go_process=ribonucleoside monophosphate biosynthetic process|0009156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167336.1;locus_tag=LSA_RS01965;product=ribose-phosphate diphosphokinase;protein_id=WP_014081712.1;transl_table=11
NC_015978.1	RefSeq	gene	391106	391915	.	-	.	ID=gene-LSA_RS01970;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=LSA_RS01970;old_locus_tag=LSA_04060
NC_015978.1	Protein Homology	CDS	391106	391915	.	-	0	ID=cds-WP_041817610.1;Parent=gene-LSA_RS01970;Dbxref=Genbank:WP_041817610.1;Name=WP_041817610.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022853.1;locus_tag=LSA_RS01970;product=sugar-phosphatase;protein_id=WP_041817610.1;transl_table=11
NC_015978.1	RefSeq	gene	391917	393290	.	-	.	ID=gene-LSA_RS01975;Name=LSA_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01975;old_locus_tag=LSA_04070
NC_015978.1	Protein Homology	CDS	391917	393290	.	-	0	ID=cds-WP_041817612.1;Parent=gene-LSA_RS01975;Dbxref=Genbank:WP_041817612.1;Name=WP_041817612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022852.1;locus_tag=LSA_RS01975;product=HD domain-containing protein;protein_id=WP_041817612.1;transl_table=11
NC_015978.1	RefSeq	gene	393421	393855	.	+	.	ID=gene-LSA_RS01980;Name=LSA_RS01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01980;old_locus_tag=LSA_04080
NC_015978.1	Protein Homology	CDS	393421	393855	.	+	0	ID=cds-WP_014081715.1;Parent=gene-LSA_RS01980;Dbxref=Genbank:WP_014081715.1;Name=WP_014081715.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020711.2;locus_tag=LSA_RS01980;product=DUF1934 domain-containing protein;protein_id=WP_014081715.1;transl_table=11
NC_015978.1	RefSeq	gene	393949	394443	.	+	.	ID=gene-LSA_RS01985;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=LSA_RS01985;old_locus_tag=LSA_04090
NC_015978.1	Protein Homology	CDS	393949	394443	.	+	0	ID=cds-WP_103434679.1;Parent=gene-LSA_RS01985;Dbxref=Genbank:WP_103434679.1;Name=WP_103434679.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoE;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003715080.1;locus_tag=LSA_RS01985;product=DNA-directed RNA polymerase subunit delta;protein_id=WP_103434679.1;transl_table=11
NC_015978.1	RefSeq	gene	394594	396210	.	+	.	ID=gene-LSA_RS01990;Name=LSA_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01990;old_locus_tag=LSA_04100
NC_015978.1	Protein Homology	CDS	394594	396210	.	+	0	ID=cds-WP_014081717.1;Parent=gene-LSA_RS01990;Dbxref=Genbank:WP_014081717.1;Name=WP_014081717.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020281970.1;locus_tag=LSA_RS01990;product=CTP synthase;protein_id=WP_014081717.1;transl_table=11
NC_015978.1	RefSeq	gene	396329	397618	.	+	.	ID=gene-LSA_RS01995;Name=LSA_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS01995;old_locus_tag=LSA_04110
NC_015978.1	Protein Homology	CDS	396329	397618	.	+	0	ID=cds-WP_014081718.1;Parent=gene-LSA_RS01995;Dbxref=Genbank:WP_014081718.1;Name=WP_014081718.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011667278.1;locus_tag=LSA_RS01995;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_014081718.1;transl_table=11
NC_015978.1	RefSeq	gene	397725	397973	.	+	.	ID=gene-LSA_RS02000;Name=LSA_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02000;old_locus_tag=LSA_04120
NC_015978.1	Protein Homology	CDS	397725	397973	.	+	0	ID=cds-WP_041817614.1;Parent=gene-LSA_RS02000;Dbxref=Genbank:WP_041817614.1;Name=WP_041817614.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022846.1;locus_tag=LSA_RS02000;product=type B 50S ribosomal protein L31;protein_id=WP_041817614.1;transl_table=11
NC_015978.1	RefSeq	gene	398037	398717	.	-	.	ID=gene-LSA_RS07425;Name=LSA_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07425;old_locus_tag=LSA_04130
NC_015978.1	Protein Homology	CDS	398037	398717	.	-	0	ID=cds-WP_225361812.1;Parent=gene-LSA_RS07425;Dbxref=Genbank:WP_225361812.1;Name=WP_225361812.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024743.2;locus_tag=LSA_RS07425;product=DUF4097 family beta strand repeat-containing protein;protein_id=WP_225361812.1;transl_table=11
NC_015978.1	RefSeq	gene	398998	400233	.	-	.	ID=gene-LSA_RS02010;Name=LSA_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02010;old_locus_tag=LSA_04140
NC_015978.1	Protein Homology	CDS	398998	400233	.	-	0	ID=cds-WP_014081721.1;Parent=gene-LSA_RS02010;Dbxref=Genbank:WP_014081721.1;Name=WP_014081721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013728362.1;locus_tag=LSA_RS02010;product=multidrug efflux MFS transporter;protein_id=WP_014081721.1;transl_table=11
NC_015978.1	RefSeq	gene	400237	400716	.	-	.	ID=gene-LSA_RS02015;Name=LSA_RS02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02015;old_locus_tag=LSA_04150
NC_015978.1	Protein Homology	CDS	400237	400716	.	-	0	ID=cds-WP_041817616.1;Parent=gene-LSA_RS02015;Dbxref=Genbank:WP_041817616.1;Name=WP_041817616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022844.1;locus_tag=LSA_RS02015;product=low molecular weight phosphotyrosine protein phosphatase;protein_id=WP_041817616.1;transl_table=11
NC_015978.1	RefSeq	gene	400902	401690	.	+	.	ID=gene-LSA_RS02020;Name=LSA_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02020;old_locus_tag=LSA_04160
NC_015978.1	Protein Homology	CDS	400902	401690	.	+	0	ID=cds-WP_014081723.1;Parent=gene-LSA_RS02020;Dbxref=Genbank:WP_014081723.1;Name=WP_014081723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167326.1;locus_tag=LSA_RS02020;product=hypothetical protein;protein_id=WP_014081723.1;transl_table=11
NC_015978.1	RefSeq	gene	401855	402253	.	+	.	ID=gene-LSA_RS02025;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LSA_RS02025;old_locus_tag=LSA_04170
NC_015978.1	Protein Homology	CDS	401855	402253	.	+	0	ID=cds-WP_014081459.1-6;Parent=gene-LSA_RS02025;Dbxref=Genbank:WP_014081459.1;Name=WP_014081459.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000762755.1;locus_tag=LSA_RS02025;product=IS200/IS605 family transposase;protein_id=WP_014081459.1;transl_table=11
NC_015978.1	RefSeq	gene	402253	403428	.	+	.	ID=gene-LSA_RS02030;Name=LSA_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02030;old_locus_tag=LSA_04180
NC_015978.1	Protein Homology	CDS	402253	403428	.	+	0	ID=cds-WP_014081724.1;Parent=gene-LSA_RS02030;Dbxref=Genbank:WP_014081724.1;Name=WP_014081724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003664510.1;locus_tag=LSA_RS02030;product=RNA-guided endonuclease TnpB family protein;protein_id=WP_014081724.1;transl_table=11
NC_015978.1	RefSeq	gene	403633	405006	.	+	.	ID=gene-LSA_RS02035;Name=LSA_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02035;old_locus_tag=LSA_04190
NC_015978.1	Protein Homology	CDS	403633	405006	.	+	0	ID=cds-WP_041817618.1;Parent=gene-LSA_RS02035;Dbxref=Genbank:WP_041817618.1;Name=WP_041817618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022842.1;locus_tag=LSA_RS02035;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_041817618.1;transl_table=11
NC_015978.1	RefSeq	gene	405179	406654	.	+	.	ID=gene-LSA_RS02040;Name=LSA_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02040;old_locus_tag=LSA_04200
NC_015978.1	Protein Homology	CDS	405179	406654	.	+	0	ID=cds-WP_041817620.1;Parent=gene-LSA_RS02040;Dbxref=Genbank:WP_041817620.1;Name=WP_041817620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167324.1;locus_tag=LSA_RS02040;product=DEAD/DEAH box helicase;protein_id=WP_041817620.1;transl_table=11
NC_015978.1	RefSeq	gene	406818	407987	.	+	.	ID=gene-LSA_RS02045;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=LSA_RS02045;old_locus_tag=LSA_04210
NC_015978.1	Protein Homology	CDS	406818	407987	.	+	0	ID=cds-WP_014081727.1;Parent=gene-LSA_RS02045;Dbxref=Genbank:WP_014081727.1;Name=WP_014081727.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014214750.1;locus_tag=LSA_RS02045;product=alanine racemase;protein_id=WP_014081727.1;transl_table=11
NC_015978.1	RefSeq	gene	407971	408243	.	+	.	ID=gene-LSA_RS02050;Name=LSA_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02050;old_locus_tag=LSA_04220
NC_015978.1	GeneMarkS-2+	CDS	407971	408243	.	+	0	ID=cds-WP_014081728.1;Parent=gene-LSA_RS02050;Dbxref=Genbank:WP_014081728.1;Name=WP_014081728.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS02050;product=hypothetical protein;protein_id=WP_014081728.1;transl_table=11
NC_015978.1	RefSeq	gene	408240	408605	.	+	.	ID=gene-LSA_RS02055;Name=LSA_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02055;old_locus_tag=LSA_04230
NC_015978.1	Protein Homology	CDS	408240	408605	.	+	0	ID=cds-WP_041817621.1;Parent=gene-LSA_RS02055;Dbxref=Genbank:WP_041817621.1;Name=WP_041817621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022835.1;locus_tag=LSA_RS02055;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_041817621.1;transl_table=11
NC_015978.1	RefSeq	gene	408727	409284	.	+	.	ID=gene-LSA_RS02060;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=LSA_RS02060;old_locus_tag=LSA_04240
NC_015978.1	Protein Homology	CDS	408727	409284	.	+	0	ID=cds-WP_014081730.1;Parent=gene-LSA_RS02060;Dbxref=Genbank:WP_014081730.1;Name=WP_014081730.1;Ontology_term=GO:0006412,GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011667299.1;locus_tag=LSA_RS02060;product=aminoacyl-tRNA hydrolase;protein_id=WP_014081730.1;transl_table=11
NC_015978.1	RefSeq	gene	409322	412846	.	+	.	ID=gene-LSA_RS02065;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=LSA_RS02065;old_locus_tag=LSA_04250
NC_015978.1	Protein Homology	CDS	409322	412846	.	+	0	ID=cds-WP_041817622.1;Parent=gene-LSA_RS02065;Dbxref=Genbank:WP_041817622.1;Name=WP_041817622.1;Ontology_term=GO:0006281,GO:0003690,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=mfd;go_function=double-stranded DNA binding|0003690||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022830.1;locus_tag=LSA_RS02065;product=transcription-repair coupling factor;protein_id=WP_041817622.1;transl_table=11
NC_015978.1	RefSeq	gene	412856	413143	.	+	.	ID=gene-LSA_RS02070;Name=LSA_RS02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02070;old_locus_tag=LSA_04260
NC_015978.1	Protein Homology	CDS	412856	413143	.	+	0	ID=cds-WP_014081732.1;Parent=gene-LSA_RS02070;Dbxref=Genbank:WP_014081732.1;Name=WP_014081732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167318.1;locus_tag=LSA_RS02070;product=RNA-binding S4 domain-containing protein;protein_id=WP_014081732.1;transl_table=11
NC_015978.1	RefSeq	gene	413212	413571	.	+	.	ID=gene-LSA_RS02075;Name=LSA_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02075;old_locus_tag=LSA_04270
NC_015978.1	Protein Homology	CDS	413212	413571	.	+	0	ID=cds-WP_014081733.1;Parent=gene-LSA_RS02075;Dbxref=Genbank:WP_014081733.1;Name=WP_014081733.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016839.2;locus_tag=LSA_RS02075;product=septum formation initiator family protein;protein_id=WP_014081733.1;transl_table=11
NC_015978.1	RefSeq	gene	413650	414093	.	+	.	ID=gene-LSA_RS02080;Name=LSA_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02080;old_locus_tag=LSA_04280
NC_015978.1	Protein Homology	CDS	413650	414093	.	+	0	ID=cds-WP_014081734.1;Parent=gene-LSA_RS02080;Dbxref=Genbank:WP_014081734.1;Name=WP_014081734.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003692907.1;locus_tag=LSA_RS02080;product=S1 domain-containing RNA-binding protein;protein_id=WP_014081734.1;transl_table=11
NC_015978.1	RefSeq	gene	414143	415498	.	+	.	ID=gene-LSA_RS02085;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=LSA_RS02085;old_locus_tag=LSA_04290
NC_015978.1	Protein Homology	CDS	414143	415498	.	+	0	ID=cds-WP_041817623.1;Parent=gene-LSA_RS02085;Dbxref=Genbank:WP_041817623.1;Name=WP_041817623.1;Ontology_term=GO:0006400,GO:0016879;gbkey=CDS;gene=tilS;go_function=ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: protein motif:HMM:TIGR02432.1;locus_tag=LSA_RS02085;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_041817623.1;transl_table=11
NC_015978.1	RefSeq	gene	415510	416052	.	+	.	ID=gene-LSA_RS02090;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=LSA_RS02090;old_locus_tag=LSA_04300
NC_015978.1	Protein Homology	CDS	415510	416052	.	+	0	ID=cds-WP_014081736.1;Parent=gene-LSA_RS02090;Dbxref=Genbank:WP_014081736.1;Name=WP_014081736.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166473.1;locus_tag=LSA_RS02090;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_014081736.1;transl_table=11
NC_015978.1	RefSeq	gene	416120	418168	.	+	.	ID=gene-LSA_RS02095;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=LSA_RS02095;old_locus_tag=LSA_04310
NC_015978.1	Protein Homology	CDS	416120	418168	.	+	0	ID=cds-WP_014081737.1;Parent=gene-LSA_RS02095;Dbxref=Genbank:WP_014081737.1;Name=WP_014081737.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887;gbkey=CDS;gene=ftsH;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008213328.1;locus_tag=LSA_RS02095;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_014081737.1;transl_table=11
NC_015978.1	RefSeq	gene	418231	419124	.	+	.	ID=gene-LSA_RS02100;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=LSA_RS02100;old_locus_tag=LSA_04320
NC_015978.1	Protein Homology	CDS	418231	419124	.	+	0	ID=cds-WP_014081738.1;Parent=gene-LSA_RS02100;Dbxref=Genbank:WP_014081738.1;Name=WP_014081738.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022820.1;locus_tag=LSA_RS02100;product=Hsp33 family molecular chaperone HslO;protein_id=WP_014081738.1;transl_table=11
NC_015978.1	RefSeq	gene	419124	420152	.	+	.	ID=gene-LSA_RS02105;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=LSA_RS02105;old_locus_tag=LSA_04330
NC_015978.1	Protein Homology	CDS	419124	420152	.	+	0	ID=cds-WP_014081739.1;Parent=gene-LSA_RS02105;Dbxref=Genbank:WP_014081739.1;Name=WP_014081739.1;Ontology_term=GO:0008033,GO:0003824,GO:0016491,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=catalytic activity|0003824||IEA,oxidoreductase activity|0016491||IEA,tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166470.1;locus_tag=LSA_RS02105;product=tRNA dihydrouridine synthase DusB;protein_id=WP_014081739.1;transl_table=11
NC_015978.1	RefSeq	gene	420241	421725	.	+	.	ID=gene-LSA_RS02110;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=LSA_RS02110;old_locus_tag=LSA_04340
NC_015978.1	Protein Homology	CDS	420241	421725	.	+	0	ID=cds-WP_041818058.1;Parent=gene-LSA_RS02110;Dbxref=Genbank:WP_041818058.1;Name=WP_041818058.1;Ontology_term=GO:0006430,GO:0004824,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003642090.1;locus_tag=LSA_RS02110;product=lysine--tRNA ligase;protein_id=WP_041818058.1;transl_table=11
NC_015978.1	RefSeq	gene	422080	423657	.	+	.	ID=gene-LSA_RS02115;Name=LSA_RS02115;gbkey=Gene;gene_biotype=rRNA;locus_tag=LSA_RS02115;old_locus_tag=LSA_R00200
NC_015978.1	cmsearch	rRNA	422080	423657	.	+	.	ID=rna-LSA_RS02115;Parent=gene-LSA_RS02115;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS02115;product=16S ribosomal RNA
NC_015978.1	cmsearch	exon	422080	423657	.	+	.	ID=exon-LSA_RS02115-1;Parent=rna-LSA_RS02115;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS02115;product=16S ribosomal RNA
NC_015978.1	RefSeq	gene	423753	423827	.	+	.	ID=gene-LSA_RS02120;Name=LSA_RS02120;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS02120;old_locus_tag=LSA_R00210
NC_015978.1	tRNAscan-SE	tRNA	423753	423827	.	+	.	ID=rna-LSA_RS02120;Parent=gene-LSA_RS02120;anticodon=(pos:423788..423790);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS02120;product=tRNA-Ile
NC_015978.1	tRNAscan-SE	exon	423753	423827	.	+	.	ID=exon-LSA_RS02120-1;Parent=rna-LSA_RS02120;anticodon=(pos:423788..423790);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS02120;product=tRNA-Ile
NC_015978.1	RefSeq	gene	423855	423927	.	+	.	ID=gene-LSA_RS02125;Name=LSA_RS02125;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS02125;old_locus_tag=LSA_R00220
NC_015978.1	tRNAscan-SE	tRNA	423855	423927	.	+	.	ID=rna-LSA_RS02125;Parent=gene-LSA_RS02125;anticodon=(pos:423888..423890);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS02125;product=tRNA-Ala
NC_015978.1	tRNAscan-SE	exon	423855	423927	.	+	.	ID=exon-LSA_RS02125-1;Parent=rna-LSA_RS02125;anticodon=(pos:423888..423890);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS02125;product=tRNA-Ala
NC_015978.1	RefSeq	gene	424096	427012	.	+	.	ID=gene-LSA_RS02130;Name=LSA_RS02130;gbkey=Gene;gene_biotype=rRNA;locus_tag=LSA_RS02130;old_locus_tag=LSA_R00230
NC_015978.1	cmsearch	rRNA	424096	427012	.	+	.	ID=rna-LSA_RS02130;Parent=gene-LSA_RS02130;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS02130;product=23S ribosomal RNA
NC_015978.1	cmsearch	exon	424096	427012	.	+	.	ID=exon-LSA_RS02130-1;Parent=rna-LSA_RS02130;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS02130;product=23S ribosomal RNA
NC_015978.1	RefSeq	gene	427096	427212	.	+	.	ID=gene-LSA_RS02135;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LSA_RS02135;old_locus_tag=LSA_R00240
NC_015978.1	cmsearch	rRNA	427096	427212	.	+	.	ID=rna-LSA_RS02135;Parent=gene-LSA_RS02135;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS02135;product=5S ribosomal RNA
NC_015978.1	cmsearch	exon	427096	427212	.	+	.	ID=exon-LSA_RS02135-1;Parent=rna-LSA_RS02135;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS02135;product=5S ribosomal RNA
NC_015978.1	RefSeq	gene	427222	427294	.	+	.	ID=gene-LSA_RS02140;Name=LSA_RS02140;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS02140;old_locus_tag=LSA_R00250
NC_015978.1	tRNAscan-SE	tRNA	427222	427294	.	+	.	ID=rna-LSA_RS02140;Parent=gene-LSA_RS02140;anticodon=(pos:427255..427257);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS02140;product=tRNA-Asn
NC_015978.1	tRNAscan-SE	exon	427222	427294	.	+	.	ID=exon-LSA_RS02140-1;Parent=rna-LSA_RS02140;anticodon=(pos:427255..427257);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS02140;product=tRNA-Asn
NC_015978.1	RefSeq	gene	427354	427426	.	+	.	ID=gene-LSA_RS02145;Name=LSA_RS02145;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS02145;old_locus_tag=LSA_R00260
NC_015978.1	tRNAscan-SE	tRNA	427354	427426	.	+	.	ID=rna-LSA_RS02145;Parent=gene-LSA_RS02145;anticodon=(pos:427387..427389);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS02145;product=tRNA-Thr
NC_015978.1	tRNAscan-SE	exon	427354	427426	.	+	.	ID=exon-LSA_RS02145-1;Parent=rna-LSA_RS02145;anticodon=(pos:427387..427389);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS02145;product=tRNA-Thr
NC_015978.1	RefSeq	gene	427562	427948	.	+	.	ID=gene-LSA_RS02150;Name=LSA_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02150;old_locus_tag=LSA_04350
NC_015978.1	Protein Homology	CDS	427562	427948	.	+	0	ID=cds-WP_014081741.1;Parent=gene-LSA_RS02150;Dbxref=Genbank:WP_014081741.1;Name=WP_014081741.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021739.1;locus_tag=LSA_RS02150;product=MerR family transcriptional regulator;protein_id=WP_014081741.1;transl_table=11
NC_015978.1	RefSeq	gene	427964	429310	.	+	.	ID=gene-LSA_RS02155;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=LSA_RS02155;old_locus_tag=LSA_04360
NC_015978.1	Protein Homology	CDS	427964	429310	.	+	0	ID=cds-WP_014081742.1;Parent=gene-LSA_RS02155;Dbxref=Genbank:WP_014081742.1;Name=WP_014081742.1;Ontology_term=GO:0006542,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamate-ammonia ligase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166382.1;locus_tag=LSA_RS02155;product=type I glutamate--ammonia ligase;protein_id=WP_014081742.1;transl_table=11
NC_015978.1	RefSeq	gene	429447	430928	.	+	.	ID=gene-LSA_RS02160;Name=LSA_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02160;old_locus_tag=LSA_04370
NC_015978.1	Protein Homology	CDS	429447	430928	.	+	0	ID=cds-WP_014081743.1;Parent=gene-LSA_RS02160;Dbxref=Genbank:WP_014081743.1;Name=WP_014081743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166381.1;locus_tag=LSA_RS02160;product=peptide MFS transporter;protein_id=WP_014081743.1;transl_table=11
NC_015978.1	RefSeq	gene	431140	431222	.	+	.	ID=gene-LSA_RS02165;Name=LSA_RS02165;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS02165;old_locus_tag=LSA_R00270
NC_015978.1	tRNAscan-SE	tRNA	431140	431222	.	+	.	ID=rna-LSA_RS02165;Parent=gene-LSA_RS02165;anticodon=(pos:431176..431178);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS02165;product=tRNA-Tyr
NC_015978.1	tRNAscan-SE	exon	431140	431222	.	+	.	ID=exon-LSA_RS02165-1;Parent=rna-LSA_RS02165;anticodon=(pos:431176..431178);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS02165;product=tRNA-Tyr
NC_015978.1	RefSeq	gene	431232	431303	.	+	.	ID=gene-LSA_RS02170;Name=LSA_RS02170;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS02170;old_locus_tag=LSA_R00280
NC_015978.1	tRNAscan-SE	tRNA	431232	431303	.	+	.	ID=rna-LSA_RS02170;Parent=gene-LSA_RS02170;anticodon=(pos:431264..431266);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS02170;product=tRNA-Gln
NC_015978.1	tRNAscan-SE	exon	431232	431303	.	+	.	ID=exon-LSA_RS02170-1;Parent=rna-LSA_RS02170;anticodon=(pos:431264..431266);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS02170;product=tRNA-Gln
NC_015978.1	RefSeq	gene	431354	432055	.	+	.	ID=gene-LSA_RS02175;Name=LSA_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02175;old_locus_tag=LSA_04380
NC_015978.1	Protein Homology	CDS	431354	432055	.	+	0	ID=cds-WP_041817624.1;Parent=gene-LSA_RS02175;Dbxref=Genbank:WP_041817624.1;Name=WP_041817624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003637725.1;locus_tag=LSA_RS02175;product=GntR family transcriptional regulator;protein_id=WP_041817624.1;transl_table=11
NC_015978.1	RefSeq	gene	432168	433634	.	+	.	ID=gene-LSA_RS02180;Name=LSA_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02180;old_locus_tag=LSA_04390
NC_015978.1	Protein Homology	CDS	432168	433634	.	+	0	ID=cds-WP_014081745.1;Parent=gene-LSA_RS02180;Dbxref=Genbank:WP_014081745.1;Name=WP_014081745.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021748.1;locus_tag=LSA_RS02180;product=nicotinate phosphoribosyltransferase;protein_id=WP_014081745.1;transl_table=11
NC_015978.1	RefSeq	gene	433646	434485	.	+	.	ID=gene-LSA_RS02185;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=LSA_RS02185;old_locus_tag=LSA_04400
NC_015978.1	Protein Homology	CDS	433646	434485	.	+	0	ID=cds-WP_041817625.1;Parent=gene-LSA_RS02185;Dbxref=Genbank:WP_041817625.1;Name=WP_041817625.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021749.1;locus_tag=LSA_RS02185;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_041817625.1;transl_table=11
NC_015978.1	RefSeq	gene	434538	436706	.	+	.	ID=gene-LSA_RS02190;Name=LSA_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02190;old_locus_tag=LSA_04410
NC_015978.1	Protein Homology	CDS	434538	436706	.	+	0	ID=cds-WP_041817627.1;Parent=gene-LSA_RS02190;Dbxref=Genbank:WP_041817627.1;Name=WP_041817627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021750.1;locus_tag=LSA_RS02190;product=RNA-binding transcriptional accessory protein;protein_id=WP_041817627.1;transl_table=11
NC_015978.1	RefSeq	gene	436764	437201	.	+	.	ID=gene-LSA_RS02195;Name=LSA_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02195;old_locus_tag=LSA_04420
NC_015978.1	Protein Homology	CDS	436764	437201	.	+	0	ID=cds-WP_014081748.1;Parent=gene-LSA_RS02195;Dbxref=Genbank:WP_014081748.1;Name=WP_014081748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020279946.1;locus_tag=LSA_RS02195;product=SprT family protein;protein_id=WP_014081748.1;transl_table=11
NC_015978.1	RefSeq	gene	437261	437346	.	+	.	ID=gene-LSA_RS02200;Name=LSA_RS02200;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS02200;old_locus_tag=LSA_R00290
NC_015978.1	tRNAscan-SE	tRNA	437261	437346	.	+	.	ID=rna-LSA_RS02200;Parent=gene-LSA_RS02200;anticodon=(pos:437295..437297);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS02200;product=tRNA-Leu
NC_015978.1	tRNAscan-SE	exon	437261	437346	.	+	.	ID=exon-LSA_RS02200-1;Parent=rna-LSA_RS02200;anticodon=(pos:437295..437297);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS02200;product=tRNA-Leu
NC_015978.1	RefSeq	gene	437440	438630	.	-	.	ID=gene-LSA_RS02205;Name=LSA_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02205;old_locus_tag=LSA_04430
NC_015978.1	Protein Homology	CDS	437440	438630	.	-	0	ID=cds-WP_041817629.1;Parent=gene-LSA_RS02205;Dbxref=Genbank:WP_041817629.1;Name=WP_041817629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167425.1;locus_tag=LSA_RS02205;product=LCP family protein;protein_id=WP_041817629.1;transl_table=11
NC_015978.1	RefSeq	gene	438813	439484	.	+	.	ID=gene-LSA_RS02210;Name=LSA_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02210;old_locus_tag=LSA_04440
NC_015978.1	Protein Homology	CDS	438813	439484	.	+	0	ID=cds-WP_041817631.1;Parent=gene-LSA_RS02210;Dbxref=Genbank:WP_041817631.1;Name=WP_041817631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167424.1;locus_tag=LSA_RS02210;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_041817631.1;transl_table=11
NC_015978.1	RefSeq	gene	439582	440634	.	+	.	ID=gene-LSA_RS02215;Name=LSA_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02215;old_locus_tag=LSA_04450
NC_015978.1	Protein Homology	CDS	439582	440634	.	+	0	ID=cds-WP_041817632.1;Parent=gene-LSA_RS02215;Dbxref=Genbank:WP_041817632.1;Name=WP_041817632.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023225.2;locus_tag=LSA_RS02215;product=DUF3324 domain-containing protein;protein_id=WP_041817632.1;transl_table=11
NC_015978.1	RefSeq	gene	440743	442077	.	-	.	ID=gene-LSA_RS02220;Name=LSA_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02220;old_locus_tag=LSA_04460
NC_015978.1	Protein Homology	CDS	440743	442077	.	-	0	ID=cds-WP_014081752.1;Parent=gene-LSA_RS02220;Dbxref=Genbank:WP_014081752.1;Name=WP_014081752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167423.1;locus_tag=LSA_RS02220;product=C1 family peptidase;protein_id=WP_014081752.1;transl_table=11
NC_015978.1	RefSeq	gene	442132	442818	.	-	.	ID=gene-LSA_RS02225;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=LSA_RS02225;old_locus_tag=LSA_04470
NC_015978.1	Protein Homology	CDS	442132	442818	.	-	0	ID=cds-WP_014081753.1;Parent=gene-LSA_RS02225;Dbxref=Genbank:WP_014081753.1;Name=WP_014081753.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167422.1;locus_tag=LSA_RS02225;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_014081753.1;transl_table=11
NC_015978.1	RefSeq	gene	442966	443502	.	+	.	ID=gene-LSA_RS02230;Name=LSA_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02230;old_locus_tag=LSA_04480
NC_015978.1	Protein Homology	CDS	442966	443502	.	+	0	ID=cds-WP_014081754.1;Parent=gene-LSA_RS02230;Dbxref=Genbank:WP_014081754.1;Name=WP_014081754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014568595.1;locus_tag=LSA_RS02230;product=dUTP diphosphatase;protein_id=WP_014081754.1;transl_table=11
NC_015978.1	RefSeq	gene	443515	444897	.	+	.	ID=gene-LSA_RS02235;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=LSA_RS02235;old_locus_tag=LSA_04490
NC_015978.1	Protein Homology	CDS	443515	444897	.	+	0	ID=cds-WP_014081755.1;Parent=gene-LSA_RS02235;Dbxref=Genbank:WP_014081755.1;Name=WP_014081755.1;Ontology_term=GO:0006281,GO:0005524;gbkey=CDS;gene=radA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167420.1;locus_tag=LSA_RS02235;product=DNA repair protein RadA;protein_id=WP_014081755.1;transl_table=11
NC_015978.1	RefSeq	gene	444971	446461	.	+	.	ID=gene-LSA_RS02240;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=LSA_RS02240;old_locus_tag=LSA_04500
NC_015978.1	Protein Homology	CDS	444971	446461	.	+	0	ID=cds-WP_014081756.1;Parent=gene-LSA_RS02240;Dbxref=Genbank:WP_014081756.1;Name=WP_014081756.1;Ontology_term=GO:0006424,GO:0004818,GO:0009332;gbkey=CDS;gene=gltX;go_component=glutamate-tRNA ligase complex|0009332||IEA;go_function=glutamate-tRNA ligase activity|0004818||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015640002.1;locus_tag=LSA_RS02240;product=glutamate--tRNA ligase;protein_id=WP_014081756.1;transl_table=11
NC_015978.1	RefSeq	gene	446568	447986	.	+	.	ID=gene-LSA_RS02245;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=LSA_RS02245;old_locus_tag=LSA_04510
NC_015978.1	Protein Homology	CDS	446568	447986	.	+	0	ID=cds-WP_014081757.1;Parent=gene-LSA_RS02245;Dbxref=Genbank:WP_014081757.1;Name=WP_014081757.1;Ontology_term=GO:0006423,GO:0004817,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167418.1;locus_tag=LSA_RS02245;product=cysteine--tRNA ligase;protein_id=WP_014081757.1;transl_table=11
NC_015978.1	RefSeq	gene	447986	448411	.	+	.	ID=gene-LSA_RS02250;Name=LSA_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02250;old_locus_tag=LSA_04520
NC_015978.1	Protein Homology	CDS	447986	448411	.	+	0	ID=cds-WP_014081758.1;Parent=gene-LSA_RS02250;Dbxref=Genbank:WP_014081758.1;Name=WP_014081758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021766.1;locus_tag=LSA_RS02250;product=Mini-ribonuclease 3;protein_id=WP_014081758.1;transl_table=11
NC_015978.1	RefSeq	gene	448401	449153	.	+	.	ID=gene-LSA_RS02255;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=LSA_RS02255;old_locus_tag=LSA_04530
NC_015978.1	Protein Homology	CDS	448401	449153	.	+	0	ID=cds-WP_014081759.1;Parent=gene-LSA_RS02255;Dbxref=Genbank:WP_014081759.1;Name=WP_014081759.1;Ontology_term=GO:0009451,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003717521.1;locus_tag=LSA_RS02255;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_014081759.1;transl_table=11
NC_015978.1	RefSeq	gene	449156	449695	.	+	.	ID=gene-LSA_RS02260;Name=LSA_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02260;old_locus_tag=LSA_04540
NC_015978.1	Protein Homology	CDS	449156	449695	.	+	0	ID=cds-WP_041817633.1;Parent=gene-LSA_RS02260;Dbxref=Genbank:WP_041817633.1;Name=WP_041817633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008858260.1;locus_tag=LSA_RS02260;product=NYN domain-containing protein;protein_id=WP_041817633.1;transl_table=11
NC_015978.1	RefSeq	gene	449859	450473	.	+	.	ID=gene-LSA_RS02265;Name=LSA_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02265;old_locus_tag=LSA_04550
NC_015978.1	Protein Homology	CDS	449859	450473	.	+	0	ID=cds-WP_014081761.1;Parent=gene-LSA_RS02265;Dbxref=Genbank:WP_014081761.1;Name=WP_014081761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167414.1;locus_tag=LSA_RS02265;product=hypothetical protein;protein_id=WP_014081761.1;transl_table=11
NC_015978.1	RefSeq	gene	450486	450635	.	+	.	ID=gene-LSA_RS02270;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=LSA_RS02270;old_locus_tag=LSA_04560
NC_015978.1	Protein Homology	CDS	450486	450635	.	+	0	ID=cds-WP_014081762.1;Parent=gene-LSA_RS02270;Dbxref=Genbank:WP_014081762.1;Name=WP_014081762.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003637768.1;locus_tag=LSA_RS02270;product=50S ribosomal protein L33;protein_id=WP_014081762.1;transl_table=11
NC_015978.1	RefSeq	gene	450649	450825	.	+	.	ID=gene-LSA_RS02275;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=LSA_RS02275;old_locus_tag=LSA_04570
NC_015978.1	Protein Homology	CDS	450649	450825	.	+	0	ID=cds-WP_014081763.1;Parent=gene-LSA_RS02275;Dbxref=Genbank:WP_014081763.1;Name=WP_014081763.1;Ontology_term=GO:0043952,GO:0015450,GO:0005887;gbkey=CDS;gene=secE;go_component=integral component of plasma membrane|0005887||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167413.1;locus_tag=LSA_RS02275;product=preprotein translocase subunit SecE;protein_id=WP_014081763.1;transl_table=11
NC_015978.1	RefSeq	gene	450933	451487	.	+	.	ID=gene-LSA_RS02280;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=LSA_RS02280;old_locus_tag=LSA_04580
NC_015978.1	Protein Homology	CDS	450933	451487	.	+	0	ID=cds-WP_014081764.1;Parent=gene-LSA_RS02280;Dbxref=Genbank:WP_014081764.1;Name=WP_014081764.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusG;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010620521.1;locus_tag=LSA_RS02280;product=transcription termination/antitermination protein NusG;protein_id=WP_014081764.1;transl_table=11
NC_015978.1	RefSeq	gene	451614	452039	.	+	.	ID=gene-LSA_RS02285;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=LSA_RS02285;old_locus_tag=LSA_04590
NC_015978.1	Protein Homology	CDS	451614	452039	.	+	0	ID=cds-WP_041817634.1;Parent=gene-LSA_RS02285;Dbxref=Genbank:WP_041817634.1;Name=WP_041817634.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplK;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004562745.1;locus_tag=LSA_RS02285;product=50S ribosomal protein L11;protein_id=WP_041817634.1;transl_table=11
NC_015978.1	RefSeq	gene	452135	452827	.	+	.	ID=gene-LSA_RS02290;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=LSA_RS02290;old_locus_tag=LSA_04600
NC_015978.1	Protein Homology	CDS	452135	452827	.	+	0	ID=cds-WP_014081766.1;Parent=gene-LSA_RS02290;Dbxref=Genbank:WP_014081766.1;Name=WP_014081766.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplA;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167410.1;locus_tag=LSA_RS02290;product=50S ribosomal protein L1;protein_id=WP_014081766.1;transl_table=11
NC_015978.1	cmsearch	sequence_feature	452887	453006	.	+	.	ID=id-NC_015978.1:452887..453006;Dbxref=RFAM:RF00557;Note=ribosomal protein L10 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1
NC_015978.1	RefSeq	gene	453033	453542	.	+	.	ID=gene-LSA_RS02295;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=LSA_RS02295;old_locus_tag=LSA_04610
NC_015978.1	Protein Homology	CDS	453033	453542	.	+	0	ID=cds-WP_014081767.1;Parent=gene-LSA_RS02295;Dbxref=Genbank:WP_014081767.1;Name=WP_014081767.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167409.1;locus_tag=LSA_RS02295;product=50S ribosomal protein L10;protein_id=WP_014081767.1;transl_table=11
NC_015978.1	RefSeq	gene	453578	453940	.	+	.	ID=gene-LSA_RS02300;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=LSA_RS02300;old_locus_tag=LSA_04620
NC_015978.1	Protein Homology	CDS	453578	453940	.	+	0	ID=cds-WP_014081768.1;Parent=gene-LSA_RS02300;Dbxref=Genbank:WP_014081768.1;Name=WP_014081768.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplL;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011667361.1;locus_tag=LSA_RS02300;product=50S ribosomal protein L7/L12;protein_id=WP_014081768.1;transl_table=11
NC_015978.1	RefSeq	gene	454029	456581	.	+	.	ID=gene-LSA_RS02305;Name=mprF;gbkey=Gene;gene=mprF;gene_biotype=protein_coding;locus_tag=LSA_RS02305;old_locus_tag=LSA_04630
NC_015978.1	Protein Homology	CDS	454029	456581	.	+	0	ID=cds-WP_014081769.1;Parent=gene-LSA_RS02305;Dbxref=Genbank:WP_014081769.1;Name=WP_014081769.1;gbkey=CDS;gene=mprF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021782.1;locus_tag=LSA_RS02305;product=bifunctional lysylphosphatidylglycerol flippase/synthetase MprF;protein_id=WP_014081769.1;transl_table=11
NC_015978.1	RefSeq	gene	456963	458339	.	+	.	ID=gene-LSA_RS02310;Name=LSA_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02310;old_locus_tag=LSA_04650
NC_015978.1	Protein Homology	CDS	456963	458339	.	+	0	ID=cds-WP_041817635.1;Parent=gene-LSA_RS02310;Dbxref=Genbank:WP_041817635.1;Name=WP_041817635.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007125602.1;locus_tag=LSA_RS02310;product=amino acid permease;protein_id=WP_041817635.1;transl_table=11
NC_015978.1	RefSeq	gene	458350	459261	.	+	.	ID=gene-LSA_RS02315;Name=mmuM;gbkey=Gene;gene=mmuM;gene_biotype=protein_coding;locus_tag=LSA_RS02315;old_locus_tag=LSA_04660
NC_015978.1	Protein Homology	CDS	458350	459261	.	+	0	ID=cds-WP_041818062.1;Parent=gene-LSA_RS02315;Dbxref=Genbank:WP_041818062.1;Name=WP_041818062.1;Ontology_term=GO:0009086,GO:0047150;gbkey=CDS;gene=mmuM;go_function=betaine-homocysteine S-methyltransferase activity|0047150||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003550872.1;locus_tag=LSA_RS02315;product=homocysteine S-methyltransferase;protein_id=WP_041818062.1;transl_table=11
NC_015978.1	RefSeq	gene	459326	460252	.	+	.	ID=gene-LSA_RS02320;Name=LSA_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02320;old_locus_tag=LSA_04670
NC_015978.1	Protein Homology	CDS	459326	460252	.	+	0	ID=cds-WP_014081773.1;Parent=gene-LSA_RS02320;Dbxref=Genbank:WP_014081773.1;Name=WP_014081773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022138.1;locus_tag=LSA_RS02320;product=L-lactate dehydrogenase;protein_id=WP_014081773.1;transl_table=11
NC_015978.1	RefSeq	gene	460297	461313	.	-	.	ID=gene-LSA_RS02325;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=LSA_RS02325;old_locus_tag=LSA_04680
NC_015978.1	Protein Homology	CDS	460297	461313	.	-	0	ID=cds-WP_081462396.1;Parent=gene-LSA_RS02325;Dbxref=Genbank:WP_081462396.1;Name=WP_081462396.1;Ontology_term=GO:0009265,GO:0004748,GO:0030145,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,manganese ion binding|0030145||IEA;go_process=2'-deoxyribonucleotide biosynthetic process|0009265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021783.1;locus_tag=LSA_RS02325;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_081462396.1;transl_table=11
NC_015978.1	RefSeq	gene	461327	463495	.	-	.	ID=gene-LSA_RS02330;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=LSA_RS02330;old_locus_tag=LSA_04690
NC_015978.1	Protein Homology	CDS	461327	463495	.	-	0	ID=cds-WP_014081775.1;Parent=gene-LSA_RS02330;Dbxref=Genbank:WP_014081775.1;Name=WP_014081775.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003643938.1;locus_tag=LSA_RS02330;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_014081775.1;transl_table=11
NC_015978.1	RefSeq	gene	463537	463776	.	-	.	ID=gene-LSA_RS02335;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=LSA_RS02335;old_locus_tag=LSA_04700
NC_015978.1	Protein Homology	CDS	463537	463776	.	-	0	ID=cds-WP_041817636.1;Parent=gene-LSA_RS02335;Dbxref=Genbank:WP_041817636.1;Name=WP_041817636.1;Ontology_term=GO:0097573;gbkey=CDS;gene=nrdH;go_function=glutathione oxidoreductase activity|0097573||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167403.1;locus_tag=LSA_RS02335;product=glutaredoxin-like protein NrdH;protein_id=WP_041817636.1;transl_table=11
NC_015978.1	RefSeq	gene	463927	464532	.	+	.	ID=gene-LSA_RS02340;Name=LSA_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02340;old_locus_tag=LSA_04710
NC_015978.1	Protein Homology	CDS	463927	464532	.	+	0	ID=cds-WP_014081777.1;Parent=gene-LSA_RS02340;Dbxref=Genbank:WP_014081777.1;Name=WP_014081777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167402.1;locus_tag=LSA_RS02340;product=class I SAM-dependent methyltransferase;protein_id=WP_014081777.1;transl_table=11
NC_015978.1	RefSeq	gene	464537	465004	.	+	.	ID=gene-LSA_RS02345;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=LSA_RS02345;old_locus_tag=LSA_04720
NC_015978.1	Protein Homology	CDS	464537	465004	.	+	0	ID=cds-WP_014081778.1;Parent=gene-LSA_RS02345;Dbxref=Genbank:WP_014081778.1;Name=WP_014081778.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014940156.1;locus_tag=LSA_RS02345;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_014081778.1;transl_table=11
NC_015978.1	RefSeq	gene	465040	465138	.	+	.	ID=gene-LSA_RS07430;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=LSA_RS07430
NC_015978.1	cmsearch	SRP_RNA	465040	465138	.	+	.	ID=rna-LSA_RS07430;Parent=gene-LSA_RS07430;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS07430;product=signal recognition particle sRNA small type
NC_015978.1	cmsearch	exon	465040	465138	.	+	.	ID=exon-LSA_RS07430-1;Parent=rna-LSA_RS07430;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS07430;product=signal recognition particle sRNA small type
NC_015978.1	RefSeq	gene	465251	466978	.	+	.	ID=gene-LSA_RS02350;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=LSA_RS02350;old_locus_tag=LSA_04730
NC_015978.1	Protein Homology	CDS	465251	466978	.	+	0	ID=cds-WP_014081779.1;Parent=gene-LSA_RS02350;Dbxref=Genbank:WP_014081779.1;Name=WP_014081779.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014940155.1;locus_tag=LSA_RS02350;product=DNA polymerase III subunit gamma/tau;protein_id=WP_014081779.1;transl_table=11
NC_015978.1	RefSeq	gene	466998	467312	.	+	.	ID=gene-LSA_RS02355;Name=LSA_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02355;old_locus_tag=LSA_04740
NC_015978.1	Protein Homology	CDS	466998	467312	.	+	0	ID=cds-WP_041818065.1;Parent=gene-LSA_RS02355;Dbxref=Genbank:WP_041818065.1;Name=WP_041818065.1;Ontology_term=GO:0008150,GO:0003677,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020088157.1;locus_tag=LSA_RS02355;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_041818065.1;transl_table=11
NC_015978.1	RefSeq	gene	467326	467925	.	+	.	ID=gene-LSA_RS02360;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=LSA_RS02360;old_locus_tag=LSA_04750
NC_015978.1	Protein Homology	CDS	467326	467925	.	+	0	ID=cds-WP_014081781.1;Parent=gene-LSA_RS02360;Dbxref=Genbank:WP_014081781.1;Name=WP_014081781.1;Ontology_term=GO:0006281,GO:0006310;gbkey=CDS;gene=recR;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003225425.1;locus_tag=LSA_RS02360;product=recombination mediator RecR;protein_id=WP_014081781.1;transl_table=11
NC_015978.1	RefSeq	gene	467935	468180	.	+	.	ID=gene-LSA_RS02365;Name=LSA_RS02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02365;old_locus_tag=LSA_04760
NC_015978.1	Protein Homology	CDS	467935	468180	.	+	0	ID=cds-WP_014081782.1;Parent=gene-LSA_RS02365;Dbxref=Genbank:WP_014081782.1;Name=WP_014081782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167397.1;locus_tag=LSA_RS02365;product=YaaL family protein;protein_id=WP_014081782.1;transl_table=11
NC_015978.1	RefSeq	gene	468308	469213	.	+	.	ID=gene-LSA_RS02370;Name=LSA_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02370;old_locus_tag=LSA_04770
NC_015978.1	Protein Homology	CDS	468308	469213	.	+	0	ID=cds-WP_103434656.1;Parent=gene-LSA_RS02370;Dbxref=Genbank:WP_103434656.1;Name=WP_103434656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011373910.1;locus_tag=LSA_RS02370;product=GRP family sugar transporter;protein_id=WP_103434656.1;transl_table=11
NC_015978.1	RefSeq	gene	469321	469779	.	+	.	ID=gene-LSA_RS07230;Name=LSA_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07230;old_locus_tag=LSA_04780
NC_015978.1	Protein Homology	CDS	469321	469779	.	+	0	ID=cds-WP_049777592.1;Parent=gene-LSA_RS07230;Dbxref=Genbank:WP_049777592.1;Name=WP_049777592.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024803.2;locus_tag=LSA_RS07230;product=MerR family transcriptional regulator;protein_id=WP_049777592.1;transl_table=11
NC_015978.1	RefSeq	gene	469783	470091	.	+	.	ID=gene-LSA_RS07235;Name=LSA_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07235;old_locus_tag=LSA_04790
NC_015978.1	Protein Homology	CDS	469783	470091	.	+	0	ID=cds-WP_081462398.1;Parent=gene-LSA_RS07235;Dbxref=Genbank:WP_081462398.1;Name=WP_081462398.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019359.2;locus_tag=LSA_RS07235;product=TipAS antibiotic-recognition domain-containing protein;protein_id=WP_081462398.1;transl_table=11
NC_015978.1	RefSeq	gene	470241	472172	.	+	.	ID=gene-LSA_RS02380;Name=LSA_RS02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02380;old_locus_tag=LSA_04800
NC_015978.1	Protein Homology	CDS	470241	472172	.	+	0	ID=cds-WP_041817640.1;Parent=gene-LSA_RS02380;Dbxref=Genbank:WP_041817640.1;Name=WP_041817640.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003552144.1;locus_tag=LSA_RS02380;product=ABC transporter ATP-binding protein/permease;protein_id=WP_041817640.1;transl_table=11
NC_015978.1	RefSeq	gene	472286	472927	.	+	.	ID=gene-LSA_RS02385;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=LSA_RS02385;old_locus_tag=LSA_04810
NC_015978.1	Protein Homology	CDS	472286	472927	.	+	0	ID=cds-WP_014081785.1;Parent=gene-LSA_RS02385;Dbxref=Genbank:WP_014081785.1;Name=WP_014081785.1;Ontology_term=GO:0015949,GO:0004798;gbkey=CDS;gene=tmk;go_function=thymidylate kinase activity|0004798||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010077662.1;locus_tag=LSA_RS02385;product=dTMP kinase;protein_id=WP_014081785.1;transl_table=11
NC_015978.1	RefSeq	gene	472937	473263	.	+	.	ID=gene-LSA_RS02390;Name=LSA_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02390;old_locus_tag=LSA_04820
NC_015978.1	Protein Homology	CDS	472937	473263	.	+	0	ID=cds-WP_014081786.1;Parent=gene-LSA_RS02390;Dbxref=Genbank:WP_014081786.1;Name=WP_014081786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005687105.1;locus_tag=LSA_RS02390;product=cyclic-di-AMP receptor;protein_id=WP_014081786.1;transl_table=11
NC_015978.1	RefSeq	gene	473263	474291	.	+	.	ID=gene-LSA_RS02395;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=LSA_RS02395;old_locus_tag=LSA_04830
NC_015978.1	Protein Homology	CDS	473263	474291	.	+	0	ID=cds-WP_014081787.1;Parent=gene-LSA_RS02395;Dbxref=Genbank:WP_014081787.1;Name=WP_014081787.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=holB;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021801.1;locus_tag=LSA_RS02395;product=DNA polymerase III subunit delta';protein_id=WP_014081787.1;transl_table=11
NC_015978.1	RefSeq	gene	474297	474623	.	+	.	ID=gene-LSA_RS02400;Name=LSA_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02400;old_locus_tag=LSA_04840
NC_015978.1	Protein Homology	CDS	474297	474623	.	+	0	ID=cds-WP_014081788.1;Parent=gene-LSA_RS02400;Dbxref=Genbank:WP_014081788.1;Name=WP_014081788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021802.1;locus_tag=LSA_RS02400;product=DNA replication initiation control protein YabA;protein_id=WP_014081788.1;transl_table=11
NC_015978.1	RefSeq	gene	474629	475513	.	+	.	ID=gene-LSA_RS02405;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=LSA_RS02405;old_locus_tag=LSA_04850
NC_015978.1	Protein Homology	CDS	474629	475513	.	+	0	ID=cds-WP_014081789.1;Parent=gene-LSA_RS02405;Dbxref=Genbank:WP_014081789.1;Name=WP_014081789.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167391.1;locus_tag=LSA_RS02405;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_014081789.1;transl_table=11
NC_015978.1	RefSeq	gene	475523	476266	.	+	.	ID=gene-LSA_RS02410;Name=LSA_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02410;old_locus_tag=LSA_04860
NC_015978.1	Protein Homology	CDS	475523	476266	.	+	0	ID=cds-WP_014081790.1;Parent=gene-LSA_RS02410;Dbxref=Genbank:WP_014081790.1;Name=WP_014081790.1;Ontology_term=GO:0006633,GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167390.1;locus_tag=LSA_RS02410;product=thioesterase;protein_id=WP_014081790.1;transl_table=11
NC_015978.1	RefSeq	gene	476279	477004	.	+	.	ID=gene-LSA_RS02415;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=LSA_RS02415;old_locus_tag=LSA_04870
NC_015978.1	Protein Homology	CDS	476279	477004	.	+	0	ID=cds-WP_014081791.1;Parent=gene-LSA_RS02415;Dbxref=Genbank:WP_014081791.1;Name=WP_014081791.1;Ontology_term=GO:0006400,GO:0003725;gbkey=CDS;gene=tsaB;go_function=double-stranded RNA binding|0003725||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003640977.1;locus_tag=LSA_RS02415;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_014081791.1;transl_table=11
NC_015978.1	RefSeq	gene	476988	477587	.	+	.	ID=gene-LSA_RS02420;Name=LSA_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02420;old_locus_tag=LSA_04880
NC_015978.1	Protein Homology	CDS	476988	477587	.	+	0	ID=cds-WP_041817642.1;Parent=gene-LSA_RS02420;Dbxref=Genbank:WP_041817642.1;Name=WP_041817642.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025054.2;locus_tag=LSA_RS02420;product=GNAT family N-acetyltransferase;protein_id=WP_041817642.1;transl_table=11
NC_015978.1	RefSeq	gene	477607	478647	.	+	.	ID=gene-LSA_RS02425;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=LSA_RS02425;old_locus_tag=LSA_04890
NC_015978.1	Protein Homology	CDS	477607	478647	.	+	0	ID=cds-WP_041817643.1;Parent=gene-LSA_RS02425;Dbxref=Genbank:WP_041817643.1;Name=WP_041817643.1;Ontology_term=GO:0006400;gbkey=CDS;gene=tsaD;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011667382.1;locus_tag=LSA_RS02425;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_041817643.1;transl_table=11
NC_015978.1	RefSeq	gene	478733	479002	.	+	.	ID=gene-LSA_RS02430;Name=LSA_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02430;old_locus_tag=LSA_04900
NC_015978.1	Protein Homology	CDS	478733	479002	.	+	0	ID=cds-WP_014081794.1;Parent=gene-LSA_RS02430;Dbxref=Genbank:WP_014081794.1;Name=WP_014081794.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002891308.1;locus_tag=LSA_RS02430;product=autorepressor SdpR family transcription factor;protein_id=WP_014081794.1;transl_table=11
NC_015978.1	RefSeq	gene	478999	479478	.	+	.	ID=gene-LSA_RS02435;Name=LSA_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02435;old_locus_tag=LSA_04910
NC_015978.1	Protein Homology	CDS	478999	479478	.	+	0	ID=cds-WP_014081795.1;Parent=gene-LSA_RS02435;Dbxref=Genbank:WP_014081795.1;Name=WP_014081795.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019468.2;locus_tag=LSA_RS02435;product=DUF1648 domain-containing protein;protein_id=WP_014081795.1;transl_table=11
NC_015978.1	RefSeq	gene	479635	481578	.	-	.	ID=gene-LSA_RS02440;Name=LSA_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02440;old_locus_tag=LSA_04920
NC_015978.1	Protein Homology	CDS	479635	481578	.	-	0	ID=cds-WP_041817645.1;Parent=gene-LSA_RS02440;Dbxref=Genbank:WP_041817645.1;Name=WP_041817645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003692484.1;locus_tag=LSA_RS02440;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_041817645.1;transl_table=11
NC_015978.1	RefSeq	gene	481718	482368	.	+	.	ID=gene-LSA_RS02445;Name=LSA_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02445;old_locus_tag=LSA_04930
NC_015978.1	Protein Homology	CDS	481718	482368	.	+	0	ID=cds-WP_014081797.1;Parent=gene-LSA_RS02445;Dbxref=Genbank:WP_014081797.1;Name=WP_014081797.1;Ontology_term=GO:0045892,GO:0051775;gbkey=CDS;go_process=negative regulation of DNA-templated transcription|0045892||IEA,response to redox state|0051775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010622933.1;locus_tag=LSA_RS02445;product=redox-sensing transcriptional repressor Rex;protein_id=WP_014081797.1;transl_table=11
NC_015978.1	RefSeq	gene	482388	483899	.	+	.	ID=gene-LSA_RS07240;Name=LSA_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07240;old_locus_tag=LSA_04940
NC_015978.1	Protein Homology	CDS	482388	483899	.	+	0	ID=cds-WP_049777594.1;Parent=gene-LSA_RS07240;Dbxref=Genbank:WP_049777594.1;Name=WP_049777594.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016424.2;locus_tag=LSA_RS07240;product=TPM domain-containing protein;protein_id=WP_049777594.1;transl_table=11
NC_015978.1	RefSeq	gene	483931	484515	.	+	.	ID=gene-LSA_RS02455;Name=LSA_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02455;old_locus_tag=LSA_04950
NC_015978.1	Protein Homology	CDS	483931	484515	.	+	0	ID=cds-WP_014081799.1;Parent=gene-LSA_RS02455;Dbxref=Genbank:WP_014081799.1;Name=WP_014081799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003678281.1;locus_tag=LSA_RS02455;product=LemA family protein;protein_id=WP_014081799.1;transl_table=11
NC_015978.1	RefSeq	gene	484672	485163	.	+	.	ID=gene-LSA_RS02460;Name=LSA_RS02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02460;old_locus_tag=LSA_04960
NC_015978.1	Protein Homology	CDS	484672	485163	.	+	0	ID=cds-WP_049777595.1;Parent=gene-LSA_RS02460;Dbxref=Genbank:WP_049777595.1;Name=WP_049777595.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=LSA_RS02460;product=ABC transporter ATP-binding protein;protein_id=WP_049777595.1;transl_table=11
NC_015978.1	RefSeq	gene	485205	485531	.	+	.	ID=gene-LSA_RS02465;Name=LSA_RS02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02465;old_locus_tag=LSA_04970
NC_015978.1	Protein Homology	CDS	485205	485531	.	+	0	ID=cds-WP_238331743.1;Parent=gene-LSA_RS02465;Dbxref=Genbank:WP_238331743.1;Name=WP_238331743.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022896.2;locus_tag=LSA_RS02465;product=DUF3021 family protein;protein_id=WP_238331743.1;transl_table=11
NC_015978.1	RefSeq	gene	485643	485927	.	+	.	ID=gene-LSA_RS02470;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=LSA_RS02470;old_locus_tag=LSA_04980
NC_015978.1	Protein Homology	CDS	485643	485927	.	+	0	ID=cds-WP_014081800.1;Parent=gene-LSA_RS02470;Dbxref=Genbank:WP_014081800.1;Name=WP_014081800.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=groES;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021812.1;locus_tag=LSA_RS02470;product=co-chaperone GroES;protein_id=WP_014081800.1;transl_table=11
NC_015978.1	RefSeq	gene	485966	487585	.	+	.	ID=gene-LSA_RS02475;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=LSA_RS02475;old_locus_tag=LSA_04990
NC_015978.1	Protein Homology	CDS	485966	487585	.	+	0	ID=cds-WP_014081801.1;Parent=gene-LSA_RS02475;Dbxref=Genbank:WP_014081801.1;Name=WP_014081801.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0006457,GO:0005515,GO:0016887;gbkey=CDS;gene=groL;go_function=protein binding|0005515||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003682571.1;locus_tag=LSA_RS02475;product=chaperonin GroEL;protein_id=WP_014081801.1;transl_table=11
NC_015978.1	RefSeq	gene	487706	488128	.	+	.	ID=gene-LSA_RS02480;Name=LSA_RS02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02480;old_locus_tag=LSA_05000
NC_015978.1	GeneMarkS-2+	CDS	487706	488128	.	+	0	ID=cds-WP_041817649.1;Parent=gene-LSA_RS02480;Dbxref=Genbank:WP_041817649.1;Name=WP_041817649.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS02480;product=hypothetical protein;protein_id=WP_041817649.1;transl_table=11
NC_015978.1	RefSeq	gene	488144	489982	.	+	.	ID=gene-LSA_RS02485;Name=LSA_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02485;old_locus_tag=LSA_05010
NC_015978.1	Protein Homology	CDS	488144	489982	.	+	0	ID=cds-WP_014081802.1;Parent=gene-LSA_RS02485;Dbxref=Genbank:WP_014081802.1;Name=WP_014081802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003646071.1;locus_tag=LSA_RS02485;product=APC family permease;protein_id=WP_014081802.1;transl_table=11
NC_015978.1	RefSeq	gene	490027	491769	.	-	.	ID=gene-LSA_RS02490;Name=LSA_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02490;old_locus_tag=LSA_05020
NC_015978.1	Protein Homology	CDS	490027	491769	.	-	0	ID=cds-WP_041817651.1;Parent=gene-LSA_RS02490;Dbxref=Genbank:WP_041817651.1;Name=WP_041817651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010023012.1;locus_tag=LSA_RS02490;product=ABC transporter ATP-binding protein/permease;protein_id=WP_041817651.1;transl_table=11
NC_015978.1	RefSeq	gene	491918	492556	.	-	.	ID=gene-LSA_RS02495;Name=LSA_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02495;old_locus_tag=LSA_05030
NC_015978.1	Protein Homology	CDS	491918	492556	.	-	0	ID=cds-WP_041817652.1;Parent=gene-LSA_RS02495;Dbxref=Genbank:WP_041817652.1;Name=WP_041817652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476442.1;locus_tag=LSA_RS02495;product=YigZ family protein;protein_id=WP_041817652.1;transl_table=11
NC_015978.1	RefSeq	gene	492597	493562	.	+	.	ID=gene-LSA_RS02500;Name=LSA_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02500;old_locus_tag=LSA_05040
NC_015978.1	Protein Homology	CDS	492597	493562	.	+	0	ID=cds-WP_225361791.1;Parent=gene-LSA_RS02500;Dbxref=Genbank:WP_225361791.1;Name=WP_225361791.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF016724.2;locus_tag=LSA_RS02500;product=DEAD/DEAH box helicase family protein;protein_id=WP_225361791.1;transl_table=11
NC_015978.1	RefSeq	gene	493514	493906	.	+	.	ID=gene-LSA_RS07875;Name=LSA_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07875
NC_015978.1	Protein Homology	CDS	493514	493906	.	+	0	ID=cds-WP_238331742.1;Parent=gene-LSA_RS07875;Dbxref=Genbank:WP_238331742.1;Name=WP_238331742.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012493.2;locus_tag=LSA_RS07875;product=helicase-related protein;protein_id=WP_238331742.1;transl_table=11
NC_015978.1	RefSeq	gene	494019	494573	.	+	.	ID=gene-LSA_RS02505;Name=LSA_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02505;old_locus_tag=LSA_05060
NC_015978.1	Protein Homology	CDS	494019	494573	.	+	0	ID=cds-WP_144011132.1;Parent=gene-LSA_RS02505;Dbxref=Genbank:WP_144011132.1;Name=WP_144011132.1;Ontology_term=GO:0009116;gbkey=CDS;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: protein motif:HMM:NF012383.2;locus_tag=LSA_RS02505;product=phosphoribosyltransferase family protein;protein_id=WP_144011132.1;transl_table=11
NC_015978.1	RefSeq	gene	494661	495194	.	+	.	ID=gene-LSA_RS02510;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=LSA_RS02510;old_locus_tag=LSA_05070
NC_015978.1	Protein Homology	CDS	494661	495194	.	+	0	ID=cds-WP_041817654.1;Parent=gene-LSA_RS02510;Dbxref=Genbank:WP_041817654.1;Name=WP_041817654.1;Ontology_term=GO:0009386,GO:0045182,GO:0005840,GO:0022626;gbkey=CDS;gene=raiA;go_component=ribosome|0005840||IEA,cytosolic ribosome|0022626||IEA;go_function=translation regulator activity|0045182||IEA;go_process=translational attenuation|0009386||IEA;inference=COORDINATES: protein motif:HMM:TIGR00741.1;locus_tag=LSA_RS02510;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_041817654.1;transl_table=11
NC_015978.1	RefSeq	gene	495330	497693	.	+	.	ID=gene-LSA_RS02515;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=LSA_RS02515;old_locus_tag=LSA_05080
NC_015978.1	Protein Homology	CDS	495330	497693	.	+	0	ID=cds-WP_014081807.1;Parent=gene-LSA_RS02515;Dbxref=Genbank:WP_014081807.1;Name=WP_014081807.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011667404.1;locus_tag=LSA_RS02515;product=preprotein translocase subunit SecA;protein_id=WP_014081807.1;transl_table=11
NC_015978.1	RefSeq	gene	497741	498851	.	+	.	ID=gene-LSA_RS02520;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=LSA_RS02520;old_locus_tag=LSA_05090
NC_015978.1	Protein Homology	CDS	497741	497812	.	+	0	ID=cds-WP_103429157.1;Parent=gene-LSA_RS02520;Dbxref=Genbank:WP_103429157.1;Name=WP_103429157.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_156403070.1;locus_tag=LSA_RS02520;product=peptide chain release factor 2;protein_id=WP_103429157.1;transl_table=11
NC_015978.1	Protein Homology	CDS	497814	498851	.	+	0	ID=cds-WP_103429157.1;Parent=gene-LSA_RS02520;Dbxref=Genbank:WP_103429157.1;Name=WP_103429157.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_156403070.1;locus_tag=LSA_RS02520;product=peptide chain release factor 2;protein_id=WP_103429157.1;transl_table=11
NC_015978.1	RefSeq	gene	498867	500024	.	+	.	ID=gene-LSA_RS02525;Name=LSA_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02525;old_locus_tag=LSA_05100
NC_015978.1	Protein Homology	CDS	498867	500024	.	+	0	ID=cds-WP_014081809.1;Parent=gene-LSA_RS02525;Dbxref=Genbank:WP_014081809.1;Name=WP_014081809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166946.1;locus_tag=LSA_RS02525;product=PDZ domain-containing protein;protein_id=WP_014081809.1;transl_table=11
NC_015978.1	RefSeq	gene	500076	500426	.	+	.	ID=gene-LSA_RS02530;Name=LSA_RS02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02530;old_locus_tag=LSA_05110
NC_015978.1	Protein Homology	CDS	500076	500426	.	+	0	ID=cds-WP_014081810.1;Parent=gene-LSA_RS02530;Dbxref=Genbank:WP_014081810.1;Name=WP_014081810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002834091.1;locus_tag=LSA_RS02530;product=phage holin family protein;protein_id=WP_014081810.1;transl_table=11
NC_015978.1	RefSeq	gene	500459	501421	.	+	.	ID=gene-LSA_RS02535;Name=hprK;gbkey=Gene;gene=hprK;gene_biotype=protein_coding;locus_tag=LSA_RS02535;old_locus_tag=LSA_05120
NC_015978.1	Protein Homology	CDS	500459	501421	.	+	0	ID=cds-WP_014081811.1;Parent=gene-LSA_RS02535;Dbxref=Genbank:WP_014081811.1;Name=WP_014081811.1;Ontology_term=GO:0009401,GO:0004674,GO:0016791;gbkey=CDS;gene=hprK;go_function=protein serine/threonine kinase activity|0004674||IEA,phosphatase activity|0016791||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011667418.1;locus_tag=LSA_RS02535;product=HPr(Ser) kinase/phosphatase;protein_id=WP_014081811.1;transl_table=11
NC_015978.1	RefSeq	gene	501421	502236	.	+	.	ID=gene-LSA_RS02540;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=LSA_RS02540;old_locus_tag=LSA_05130
NC_015978.1	Protein Homology	CDS	501421	502236	.	+	0	ID=cds-WP_014081812.1;Parent=gene-LSA_RS02540;Dbxref=Genbank:WP_014081812.1;Name=WP_014081812.1;Ontology_term=GO:0009249,GO:0008961,GO:0016021;gbkey=CDS;gene=lgt;go_component=integral component of membrane|0016021||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021836.1;locus_tag=LSA_RS02540;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_014081812.1;transl_table=11
NC_015978.1	RefSeq	gene	502247	503263	.	+	.	ID=gene-LSA_RS02545;Name=LSA_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02545;old_locus_tag=LSA_05140
NC_015978.1	Protein Homology	CDS	502247	503263	.	+	0	ID=cds-WP_041817656.1;Parent=gene-LSA_RS02545;Dbxref=Genbank:WP_041817656.1;Name=WP_041817656.1;Ontology_term=GO:0046168,GO:0004367,GO:0051287,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase [NAD+] activity|0004367||IEA,NAD binding|0051287||IEA;go_process=glycerol-3-phosphate catabolic process|0046168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166942.1;locus_tag=LSA_RS02545;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_041817656.1;transl_table=11
NC_015978.1	RefSeq	gene	503282	504160	.	+	.	ID=gene-LSA_RS02550;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=LSA_RS02550;old_locus_tag=LSA_05150
NC_015978.1	Protein Homology	CDS	503282	504160	.	+	0	ID=cds-WP_014081814.1;Parent=gene-LSA_RS02550;Dbxref=Genbank:WP_014081814.1;Name=WP_014081814.1;Ontology_term=GO:0009225,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011018342.1;locus_tag=LSA_RS02550;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_014081814.1;transl_table=11
NC_015978.1	RefSeq	gene	504277	504783	.	+	.	ID=gene-LSA_RS02555;Name=LSA_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02555;old_locus_tag=LSA_05160
NC_015978.1	Protein Homology	CDS	504277	504783	.	+	0	ID=cds-WP_014081815.1;Parent=gene-LSA_RS02555;Dbxref=Genbank:WP_014081815.1;Name=WP_014081815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166940.1;locus_tag=LSA_RS02555;product=peroxiredoxin;protein_id=WP_014081815.1;transl_table=11
NC_015978.1	RefSeq	gene	504796	505728	.	+	.	ID=gene-LSA_RS02560;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=LSA_RS02560;old_locus_tag=LSA_05170
NC_015978.1	Protein Homology	CDS	504796	505728	.	+	0	ID=cds-WP_014081816.1;Parent=gene-LSA_RS02560;Dbxref=Genbank:WP_014081816.1;Name=WP_014081816.1;Ontology_term=GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase activity|0004791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166939.1;locus_tag=LSA_RS02560;product=thioredoxin-disulfide reductase;protein_id=WP_014081816.1;transl_table=11
NC_015978.1	RefSeq	gene	505849	507852	.	+	.	ID=gene-LSA_RS02565;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=LSA_RS02565;old_locus_tag=LSA_05180
NC_015978.1	Protein Homology	CDS	505849	507852	.	+	0	ID=cds-WP_014081817.1;Parent=gene-LSA_RS02565;Dbxref=Genbank:WP_014081817.1;Name=WP_014081817.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0005524,GO:0016787,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166938.1;locus_tag=LSA_RS02565;product=excinuclease ABC subunit UvrB;protein_id=WP_014081817.1;transl_table=11
NC_015978.1	RefSeq	gene	507865	510720	.	+	.	ID=gene-LSA_RS02570;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=LSA_RS02570;old_locus_tag=LSA_05190
NC_015978.1	Protein Homology	CDS	507865	510720	.	+	0	ID=cds-WP_014081818.1;Parent=gene-LSA_RS02570;Dbxref=Genbank:WP_014081818.1;Name=WP_014081818.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011374232.1;locus_tag=LSA_RS02570;product=excinuclease ABC subunit UvrA;protein_id=WP_014081818.1;transl_table=11
NC_015978.1	RefSeq	gene	511138	511476	.	+	.	ID=gene-LSA_RS02575;Name=LSA_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02575;old_locus_tag=LSA_05210
NC_015978.1	Protein Homology	CDS	511138	511476	.	+	0	ID=cds-WP_041817658.1;Parent=gene-LSA_RS02575;Dbxref=Genbank:WP_041817658.1;Name=WP_041817658.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012869.2;locus_tag=LSA_RS02575;product=ABC transporter transmembrane domain-containing protein;protein_id=WP_041817658.1;transl_table=11
NC_015978.1	RefSeq	gene	511766	512431	.	+	.	ID=gene-LSA_RS02580;Name=LSA_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02580;old_locus_tag=LSA_05220
NC_015978.1	Protein Homology	CDS	511766	512431	.	+	0	ID=cds-WP_041817660.1;Parent=gene-LSA_RS02580;Dbxref=Genbank:WP_041817660.1;Name=WP_041817660.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=LSA_RS02580;product=ATP-binding cassette domain-containing protein;protein_id=WP_041817660.1;transl_table=11
NC_015978.1	RefSeq	gene	512628	513509	.	+	.	ID=gene-LSA_RS02585;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=LSA_RS02585;old_locus_tag=LSA_05230
NC_015978.1	Protein Homology	CDS	512628	513509	.	+	0	ID=cds-WP_041817661.1;Parent=gene-LSA_RS02585;Dbxref=Genbank:WP_041817661.1;Name=WP_041817661.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003554559.1;locus_tag=LSA_RS02585;product=RNase adapter RapZ;protein_id=WP_041817661.1;transl_table=11
NC_015978.1	RefSeq	gene	513509	514513	.	+	.	ID=gene-LSA_RS02590;Name=LSA_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02590;old_locus_tag=LSA_05240
NC_015978.1	Protein Homology	CDS	513509	514513	.	+	0	ID=cds-WP_014081821.1;Parent=gene-LSA_RS02590;Dbxref=Genbank:WP_014081821.1;Name=WP_014081821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021857.1;locus_tag=LSA_RS02590;product=YvcK family protein;protein_id=WP_014081821.1;transl_table=11
NC_015978.1	RefSeq	gene	514529	515461	.	+	.	ID=gene-LSA_RS02595;Name=whiA;gbkey=Gene;gene=whiA;gene_biotype=protein_coding;locus_tag=LSA_RS02595;old_locus_tag=LSA_05250
NC_015978.1	Protein Homology	CDS	514529	515461	.	+	0	ID=cds-WP_014081822.1;Parent=gene-LSA_RS02595;Dbxref=Genbank:WP_014081822.1;Name=WP_014081822.1;Ontology_term=GO:0043937,GO:0003677;gbkey=CDS;gene=whiA;go_function=DNA binding|0003677||IEA;go_process=regulation of sporulation|0043937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007122588.1;locus_tag=LSA_RS02595;product=DNA-binding protein WhiA;protein_id=WP_014081822.1;transl_table=11
NC_015978.1	RefSeq	gene	515521	516114	.	-	.	ID=gene-LSA_RS02600;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=LSA_RS02600;old_locus_tag=LSA_05260
NC_015978.1	Protein Homology	CDS	515521	516114	.	-	0	ID=cds-WP_014081823.1;Parent=gene-LSA_RS02600;Dbxref=Genbank:WP_014081823.1;Name=WP_014081823.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003717598.1;locus_tag=LSA_RS02600;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_014081823.1;transl_table=11
NC_015978.1	RefSeq	gene	516259	516330	.	-	.	ID=gene-LSA_RS02605;Name=LSA_RS02605;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS02605;old_locus_tag=LSA_R00300
NC_015978.1	tRNAscan-SE	tRNA	516259	516330	.	-	.	ID=rna-LSA_RS02605;Parent=gene-LSA_RS02605;anticodon=(pos:complement(516295..516297));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS02605;product=tRNA-Arg
NC_015978.1	tRNAscan-SE	exon	516259	516330	.	-	.	ID=exon-LSA_RS02605-1;Parent=rna-LSA_RS02605;anticodon=(pos:complement(516295..516297));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS02605;product=tRNA-Arg
NC_015978.1	RefSeq	gene	516573	517577	.	+	.	ID=gene-LSA_RS02610;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=LSA_RS02610;old_locus_tag=LSA_05270
NC_015978.1	Protein Homology	CDS	516573	517577	.	+	0	ID=cds-WP_014081824.1;Parent=gene-LSA_RS02610;Dbxref=Genbank:WP_014081824.1;Name=WP_014081824.1;Ontology_term=GO:0006094,GO:0006096,GO:0019682;gbkey=CDS;gene=gap;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA,glyceraldehyde-3-phosphate metabolic process|0019682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008213344.1;locus_tag=LSA_RS02610;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_014081824.1;transl_table=11
NC_015978.1	RefSeq	gene	517664	518881	.	+	.	ID=gene-LSA_RS02615;Name=LSA_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02615;old_locus_tag=LSA_05280
NC_015978.1	Protein Homology	CDS	517664	518881	.	+	0	ID=cds-WP_041817662.1;Parent=gene-LSA_RS02615;Dbxref=Genbank:WP_041817662.1;Name=WP_041817662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011667437.1;locus_tag=LSA_RS02615;product=phosphoglycerate kinase;protein_id=WP_041817662.1;transl_table=11
NC_015978.1	RefSeq	gene	519039	519803	.	+	.	ID=gene-LSA_RS02620;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=LSA_RS02620;old_locus_tag=LSA_05290
NC_015978.1	Protein Homology	CDS	519039	519803	.	+	0	ID=cds-WP_014081826.1;Parent=gene-LSA_RS02620;Dbxref=Genbank:WP_014081826.1;Name=WP_014081826.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021866.1;locus_tag=LSA_RS02620;product=triose-phosphate isomerase;protein_id=WP_014081826.1;transl_table=11
NC_015978.1	RefSeq	gene	519889	521208	.	+	.	ID=gene-LSA_RS02625;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=LSA_RS02625;old_locus_tag=LSA_05300
NC_015978.1	Protein Homology	CDS	519889	521208	.	+	0	ID=cds-WP_014081827.1;Parent=gene-LSA_RS02625;Dbxref=Genbank:WP_014081827.1;Name=WP_014081827.1;Ontology_term=GO:0006096,GO:0004634;gbkey=CDS;gene=eno;go_function=phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020280042.1;locus_tag=LSA_RS02625;product=phosphopyruvate hydratase;protein_id=WP_014081827.1;transl_table=11
NC_015978.1	RefSeq	gene	521352	521588	.	+	.	ID=gene-LSA_RS02630;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=LSA_RS02630;old_locus_tag=LSA_05310
NC_015978.1	Protein Homology	CDS	521352	521588	.	+	0	ID=cds-WP_014081828.1;Parent=gene-LSA_RS02630;Dbxref=Genbank:WP_014081828.1;Name=WP_014081828.1;Ontology_term=GO:0043952,GO:0015450,GO:0005887;gbkey=CDS;gene=secG;go_component=integral component of plasma membrane|0005887||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017868591.1;locus_tag=LSA_RS02630;product=preprotein translocase subunit SecG;protein_id=WP_014081828.1;transl_table=11
NC_015978.1	RefSeq	gene	521712	524012	.	+	.	ID=gene-LSA_RS02635;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=LSA_RS02635;old_locus_tag=LSA_05320
NC_015978.1	Protein Homology	CDS	521712	524012	.	+	0	ID=cds-WP_041817663.1;Parent=gene-LSA_RS02635;Dbxref=Genbank:WP_041817663.1;Name=WP_041817663.1;Ontology_term=GO:0006401,GO:0008997;gbkey=CDS;gene=rnr;go_function=ribonuclease R activity|0008997||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021873.1;locus_tag=LSA_RS02635;product=ribonuclease R;protein_id=WP_041817663.1;transl_table=11
NC_015978.1	RefSeq	gene	524027	524500	.	+	.	ID=gene-LSA_RS02640;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=LSA_RS02640;old_locus_tag=LSA_05330
NC_015978.1	Protein Homology	CDS	524027	524500	.	+	0	ID=cds-WP_014081830.1;Parent=gene-LSA_RS02640;Dbxref=Genbank:WP_014081830.1;Name=WP_014081830.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003666449.1;locus_tag=LSA_RS02640;product=SsrA-binding protein SmpB;protein_id=WP_014081830.1;transl_table=11
NC_015978.1	RefSeq	gene	524607	525110	.	+	.	ID=gene-LSA_RS02645;Name=LSA_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02645;old_locus_tag=LSA_05340
NC_015978.1	Protein Homology	CDS	524607	525110	.	+	0	ID=cds-WP_041817664.1;Parent=gene-LSA_RS02645;Dbxref=Genbank:WP_041817664.1;Name=WP_041817664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014082299.1;locus_tag=LSA_RS02645;product=helix-turn-helix domain-containing protein;protein_id=WP_041817664.1;transl_table=11
NC_015978.1	RefSeq	gene	525110	525964	.	+	.	ID=gene-LSA_RS02650;Name=LSA_RS02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02650;old_locus_tag=LSA_05350
NC_015978.1	Protein Homology	CDS	525110	525964	.	+	0	ID=cds-WP_041817666.1;Parent=gene-LSA_RS02650;Dbxref=Genbank:WP_041817666.1;Name=WP_041817666.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033516.0;locus_tag=LSA_RS02650;product=IS3 family transposase;protein_id=WP_041817666.1;transl_table=11
NC_015978.1	RefSeq	gene	526057	526746	.	+	.	ID=gene-LSA_RS02655;Name=LSA_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02655;old_locus_tag=LSA_05360
NC_015978.1	Protein Homology	CDS	526057	526746	.	+	0	ID=cds-WP_014081833.1;Parent=gene-LSA_RS02655;Dbxref=Genbank:WP_014081833.1;Name=WP_014081833.1;Ontology_term=GO:0006284,GO:0004844;gbkey=CDS;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006916957.1;locus_tag=LSA_RS02655;product=uracil-DNA glycosylase;protein_id=WP_014081833.1;transl_table=11
NC_015978.1	RefSeq	gene	526759	527745	.	+	.	ID=gene-LSA_RS02660;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=LSA_RS02660;old_locus_tag=LSA_05370
NC_015978.1	Protein Homology	CDS	526759	527745	.	+	0	ID=cds-WP_014081834.1;Parent=gene-LSA_RS02660;Dbxref=Genbank:WP_014081834.1;Name=WP_014081834.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014073179.1;locus_tag=LSA_RS02660;product=phosphate acetyltransferase;protein_id=WP_014081834.1;transl_table=11
NC_015978.1	RefSeq	gene	527752	528225	.	+	.	ID=gene-LSA_RS02665;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=LSA_RS02665;old_locus_tag=LSA_05380
NC_015978.1	Protein Homology	CDS	527752	528225	.	+	0	ID=cds-WP_014081835.1;Parent=gene-LSA_RS02665;Dbxref=Genbank:WP_014081835.1;Name=WP_014081835.1;Ontology_term=GO:0006400,GO:0016887,GO:0005737;gbkey=CDS;gene=tsaE;go_component=cytoplasm|0005737||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021879.1;locus_tag=LSA_RS02665;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_014081835.1;transl_table=11
NC_015978.1	RefSeq	gene	528218	528700	.	+	.	ID=gene-LSA_RS02670;Name=LSA_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02670;old_locus_tag=LSA_05390
NC_015978.1	Protein Homology	CDS	528218	528700	.	+	0	ID=cds-WP_014081836.1;Parent=gene-LSA_RS02670;Dbxref=Genbank:WP_014081836.1;Name=WP_014081836.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024812.2;locus_tag=LSA_RS02670;product=GNAT family N-acetyltransferase;protein_id=WP_014081836.1;transl_table=11
NC_015978.1	RefSeq	gene	528720	529253	.	-	.	ID=gene-LSA_RS02675;Name=LSA_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02675;old_locus_tag=LSA_05400
NC_015978.1	Protein Homology	CDS	528720	529253	.	-	0	ID=cds-WP_041817667.1;Parent=gene-LSA_RS02675;Dbxref=Genbank:WP_041817667.1;Name=WP_041817667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014940111.1;locus_tag=LSA_RS02675;product=3'-5' exonuclease;protein_id=WP_041817667.1;transl_table=11
NC_015978.1	RefSeq	gene	529267	530037	.	-	.	ID=gene-LSA_RS02680;Name=LSA_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02680;old_locus_tag=LSA_05410
NC_015978.1	Protein Homology	CDS	529267	530037	.	-	0	ID=cds-WP_041817669.1;Parent=gene-LSA_RS02680;Dbxref=Genbank:WP_041817669.1;Name=WP_041817669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004897983.1;locus_tag=LSA_RS02680;product=exodeoxyribonuclease III;protein_id=WP_041817669.1;transl_table=11
NC_015978.1	RefSeq	gene	530145	531041	.	+	.	ID=gene-LSA_RS02685;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=LSA_RS02685;old_locus_tag=LSA_05420
NC_015978.1	Protein Homology	CDS	530145	531041	.	+	0	ID=cds-WP_041817670.1;Parent=gene-LSA_RS02685;Dbxref=Genbank:WP_041817670.1;Name=WP_041817670.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003717617.1;locus_tag=LSA_RS02685;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_041817670.1;transl_table=11
NC_015978.1	RefSeq	gene	531060	531725	.	-	.	ID=gene-LSA_RS02690;Name=LSA_RS02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02690;old_locus_tag=LSA_05430
NC_015978.1	Protein Homology	CDS	531060	531725	.	-	0	ID=cds-WP_041817672.1;Parent=gene-LSA_RS02690;Dbxref=Genbank:WP_041817672.1;Name=WP_041817672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011667458.1;locus_tag=LSA_RS02690;product=DUF1361 domain-containing protein;protein_id=WP_041817672.1;transl_table=11
NC_015978.1	RefSeq	gene	531877	532731	.	+	.	ID=gene-LSA_RS02695;Name=cdaA;gbkey=Gene;gene=cdaA;gene_biotype=protein_coding;locus_tag=LSA_RS02695;old_locus_tag=LSA_05440
NC_015978.1	Protein Homology	CDS	531877	532731	.	+	0	ID=cds-WP_014081841.1;Parent=gene-LSA_RS02695;Dbxref=Genbank:WP_014081841.1;Name=WP_014081841.1;Ontology_term=GO:0004016;gbkey=CDS;gene=cdaA;go_function=adenylate cyclase activity|0004016||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020088246.1;locus_tag=LSA_RS02695;product=diadenylate cyclase CdaA;protein_id=WP_014081841.1;transl_table=11
NC_015978.1	RefSeq	gene	532731	533438	.	+	.	ID=gene-LSA_RS02700;Name=LSA_RS02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02700;old_locus_tag=LSA_05450
NC_015978.1	Protein Homology	CDS	532731	533438	.	+	0	ID=cds-WP_041818072.1;Parent=gene-LSA_RS02700;Dbxref=Genbank:WP_041818072.1;Name=WP_041818072.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019561.2;locus_tag=LSA_RS02700;product=CdaR family protein;protein_id=WP_041818072.1;transl_table=11
NC_015978.1	RefSeq	gene	533462	534808	.	+	.	ID=gene-LSA_RS02705;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=LSA_RS02705;old_locus_tag=LSA_05460
NC_015978.1	Protein Homology	CDS	533462	534808	.	+	0	ID=cds-WP_014081842.1;Parent=gene-LSA_RS02705;Dbxref=Genbank:WP_014081842.1;Name=WP_014081842.1;Ontology_term=GO:0009103,GO:0009252,GO:0008966;gbkey=CDS;gene=glmM;go_function=phosphoglucosamine mutase activity|0008966||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166915.1;locus_tag=LSA_RS02705;product=phosphoglucosamine mutase;protein_id=WP_014081842.1;transl_table=11
NC_015978.1	RefSeq	gene	535333	537354	.	+	.	ID=gene-LSA_RS02710;Name=LSA_RS02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02710
NC_015978.1	Protein Homology	CDS	535333	537354	.	+	0	ID=cds-WP_041817673.1;Parent=gene-LSA_RS02710;Dbxref=Genbank:WP_041817673.1;Name=WP_041817673.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019161.2;locus_tag=LSA_RS02710;product=bacterial Ig-like domain-containing protein;protein_id=WP_041817673.1;transl_table=11
NC_015978.1	RefSeq	gene	537637	539451	.	+	.	ID=gene-LSA_RS02715;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=LSA_RS02715;old_locus_tag=LSA_05480
NC_015978.1	Protein Homology	CDS	537637	539451	.	+	0	ID=cds-WP_014081843.1;Parent=gene-LSA_RS02715;Dbxref=Genbank:WP_014081843.1;Name=WP_014081843.1;Ontology_term=GO:0006040,GO:0009252,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003641075.1;locus_tag=LSA_RS02715;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_014081843.1;transl_table=11
NC_015978.1	RefSeq	gene	539518	539652	.	+	.	ID=gene-LSA_RS07880;Name=LSA_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07880;old_locus_tag=LSA_05490
NC_015978.1	Protein Homology	CDS	539518	539652	.	+	0	ID=cds-WP_014081844.1;Parent=gene-LSA_RS07880;Dbxref=Genbank:WP_014081844.1;Name=WP_014081844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003643109.1;locus_tag=LSA_RS07880;product=hypothetical protein;protein_id=WP_014081844.1;transl_table=11
NC_015978.1	RefSeq	gene	539669	539983	.	+	.	ID=gene-LSA_RS02720;Name=LSA_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02720;old_locus_tag=LSA_05500
NC_015978.1	Protein Homology	CDS	539669	539983	.	+	0	ID=cds-WP_014081845.1;Parent=gene-LSA_RS02720;Dbxref=Genbank:WP_014081845.1;Name=WP_014081845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003703026.1;locus_tag=LSA_RS02720;product=hypothetical protein;protein_id=WP_014081845.1;transl_table=11
NC_015978.1	RefSeq	gene	540059	541102	.	+	.	ID=gene-LSA_RS02725;Name=LSA_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02725;old_locus_tag=LSA_05510
NC_015978.1	Protein Homology	CDS	540059	541102	.	+	0	ID=cds-WP_014081846.1;Parent=gene-LSA_RS02725;Dbxref=Genbank:WP_014081846.1;Name=WP_014081846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003558977.1;locus_tag=LSA_RS02725;product=lactonase family protein;protein_id=WP_014081846.1;transl_table=11
NC_015978.1	RefSeq	gene	541123	541362	.	+	.	ID=gene-LSA_RS02730;Name=LSA_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02730;old_locus_tag=LSA_05520
NC_015978.1	Protein Homology	CDS	541123	541362	.	+	0	ID=cds-WP_014081847.1;Parent=gene-LSA_RS02730;Dbxref=Genbank:WP_014081847.1;Name=WP_014081847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021903.1;locus_tag=LSA_RS02730;product=hypothetical protein;protein_id=WP_014081847.1;transl_table=11
NC_015978.1	cmsearch	binding_site	541403	541607	.	+	.	ID=id-NC_015978.1:541403..541607;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1
NC_015978.1	RefSeq	gene	541653	543047	.	+	.	ID=gene-LSA_RS02735;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=LSA_RS02735;old_locus_tag=LSA_05530
NC_015978.1	Protein Homology	CDS	541653	543047	.	+	0	ID=cds-WP_014081848.1;Parent=gene-LSA_RS02735;Dbxref=Genbank:WP_014081848.1;Name=WP_014081848.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000432163.1;locus_tag=LSA_RS02735;product=asparagine--tRNA ligase;protein_id=WP_014081848.1;transl_table=11
NC_015978.1	RefSeq	gene	543154	544557	.	+	.	ID=gene-LSA_RS02740;Name=LSA_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02740;old_locus_tag=LSA_05540
NC_015978.1	Protein Homology	CDS	543154	544557	.	+	0	ID=cds-WP_014081849.1;Parent=gene-LSA_RS02740;Dbxref=Genbank:WP_014081849.1;Name=WP_014081849.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166910.1;locus_tag=LSA_RS02740;product=MFS transporter;protein_id=WP_014081849.1;transl_table=11
NC_015978.1	RefSeq	gene	544640	545296	.	+	.	ID=gene-LSA_RS02745;Name=LSA_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02745;old_locus_tag=LSA_05550
NC_015978.1	Protein Homology	CDS	544640	545296	.	+	0	ID=cds-WP_014081850.1;Parent=gene-LSA_RS02745;Dbxref=Genbank:WP_014081850.1;Name=WP_014081850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022282.1;locus_tag=LSA_RS02745;product=class A sortase;protein_id=WP_014081850.1;transl_table=11
NC_015978.1	RefSeq	gene	545399	545623	.	-	.	ID=gene-LSA_RS02750;Name=LSA_RS02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02750
NC_015978.1	Protein Homology	CDS	545399	545623	.	-	0	ID=cds-WP_144011133.1;Parent=gene-LSA_RS02750;Dbxref=Genbank:WP_144011133.1;Name=WP_144011133.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024687.2;locus_tag=LSA_RS02750;product=hypothetical protein;protein_id=WP_144011133.1;transl_table=11
NC_015978.1	RefSeq	gene	546013	546267	.	+	.	ID=gene-LSA_RS07245;Name=LSA_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07245;old_locus_tag=LSA_05570
NC_015978.1	GeneMarkS-2+	CDS	546013	546267	.	+	0	ID=cds-WP_049777597.1;Parent=gene-LSA_RS07245;Dbxref=Genbank:WP_049777597.1;Name=WP_049777597.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS07245;product=hypothetical protein;protein_id=WP_049777597.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	546292	546495	.	+	.	ID=gene-LSA_RS07885;Name=LSA_RS07885;end_range=546495,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS07885;partial=true;pseudo=true;start_range=.,546292
NC_015978.1	Protein Homology	CDS	546292	546495	.	+	0	ID=cds-LSA_RS07885;Parent=gene-LSA_RS07885;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0016787;end_range=546495,.;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF013696.2;locus_tag=LSA_RS07885;partial=true;product=M20/M25/M40 family metallo-hydrolase;pseudo=true;start_range=.,546292;transl_table=11
NC_015978.1	RefSeq	gene	546553	546636	.	+	.	ID=gene-LSA_RS07890;Name=LSA_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07890
NC_015978.1	Protein Homology	CDS	546553	546636	.	+	0	ID=cds-WP_258027361.1;Parent=gene-LSA_RS07890;Dbxref=Genbank:WP_258027361.1;Name=WP_258027361.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019307.2;locus_tag=LSA_RS07890;product=hypothetical protein;protein_id=WP_258027361.1;transl_table=11
NC_015978.1	RefSeq	gene	546617	547150	.	+	.	ID=gene-LSA_RS07255;Name=LSA_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07255;old_locus_tag=LSA_05590
NC_015978.1	Protein Homology	CDS	546617	547150	.	+	0	ID=cds-WP_049777599.1;Parent=gene-LSA_RS07255;Dbxref=Genbank:WP_049777599.1;Name=WP_049777599.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF013696.2;locus_tag=LSA_RS07255;product=M20/M25/M40 family metallo-hydrolase;protein_id=WP_049777599.1;transl_table=11
NC_015978.1	RefSeq	gene	547210	547560	.	-	.	ID=gene-LSA_RS02760;Name=LSA_RS02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02760;old_locus_tag=LSA_05600
NC_015978.1	Protein Homology	CDS	547210	547560	.	-	0	ID=cds-WP_225361784.1;Parent=gene-LSA_RS02760;Dbxref=Genbank:WP_225361784.1;Name=WP_225361784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009496489.1;locus_tag=LSA_RS02760;product=DUF805 domain-containing protein;protein_id=WP_225361784.1;transl_table=11
NC_015978.1	RefSeq	gene	547650	549008	.	-	.	ID=gene-LSA_RS02765;Name=LSA_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02765;old_locus_tag=LSA_05610
NC_015978.1	Protein Homology	CDS	547650	549008	.	-	0	ID=cds-WP_014081853.1;Parent=gene-LSA_RS02765;Dbxref=Genbank:WP_014081853.1;Name=WP_014081853.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166907.1;locus_tag=LSA_RS02765;product=FAD-dependent oxidoreductase;protein_id=WP_014081853.1;transl_table=11
NC_015978.1	RefSeq	gene	549149	550249	.	-	.	ID=gene-LSA_RS02770;Name=LSA_RS02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02770;old_locus_tag=LSA_05620
NC_015978.1	Protein Homology	CDS	549149	550249	.	-	0	ID=cds-WP_041817677.1;Parent=gene-LSA_RS02770;Dbxref=Genbank:WP_041817677.1;Name=WP_041817677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004165407.1;locus_tag=LSA_RS02770;product=Xaa-Pro peptidase family protein;protein_id=WP_041817677.1;transl_table=11
NC_015978.1	RefSeq	gene	550433	551029	.	+	.	ID=gene-LSA_RS02775;Name=LSA_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02775;old_locus_tag=LSA_05630
NC_015978.1	Protein Homology	CDS	550433	551029	.	+	0	ID=cds-WP_014081855.1;Parent=gene-LSA_RS02775;Dbxref=Genbank:WP_014081855.1;Name=WP_014081855.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002818733.1;locus_tag=LSA_RS02775;product=ECF transporter S component;protein_id=WP_014081855.1;transl_table=11
NC_015978.1	RefSeq	gene	551096	551926	.	+	.	ID=gene-LSA_RS02780;Name=LSA_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02780;old_locus_tag=LSA_05640
NC_015978.1	Protein Homology	CDS	551096	551926	.	+	0	ID=cds-WP_014081856.1;Parent=gene-LSA_RS02780;Dbxref=Genbank:WP_014081856.1;Name=WP_014081856.1;Ontology_term=GO:0006810,GO:0005524,GO:0042626,GO:0009898;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007746731.1;locus_tag=LSA_RS02780;product=energy-coupling factor transporter ATPase;protein_id=WP_014081856.1;transl_table=11
NC_015978.1	RefSeq	gene	551911	552771	.	+	.	ID=gene-LSA_RS02785;Name=LSA_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02785;old_locus_tag=LSA_05650
NC_015978.1	Protein Homology	CDS	551911	552771	.	+	0	ID=cds-WP_041817678.1;Parent=gene-LSA_RS02785;Dbxref=Genbank:WP_041817678.1;Name=WP_041817678.1;Ontology_term=GO:0006810,GO:0005524,GO:0042626,GO:0009898;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004560206.1;locus_tag=LSA_RS02785;product=energy-coupling factor transporter ATPase;protein_id=WP_041817678.1;transl_table=11
NC_015978.1	RefSeq	gene	552764	553564	.	+	.	ID=gene-LSA_RS02790;Name=LSA_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02790;old_locus_tag=LSA_05660
NC_015978.1	Protein Homology	CDS	552764	553564	.	+	0	ID=cds-WP_014081858.1;Parent=gene-LSA_RS02790;Dbxref=Genbank:WP_014081858.1;Name=WP_014081858.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014420.2;locus_tag=LSA_RS02790;product=energy-coupling factor transporter transmembrane protein EcfT;protein_id=WP_014081858.1;transl_table=11
NC_015978.1	RefSeq	gene	553664	555280	.	+	.	ID=gene-LSA_RS02795;Name=LSA_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02795;old_locus_tag=LSA_05670
NC_015978.1	GeneMarkS-2+	CDS	553664	555280	.	+	0	ID=cds-WP_041817681.1;Parent=gene-LSA_RS02795;Dbxref=Genbank:WP_041817681.1;Name=WP_041817681.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS02795;product=glycosyltransferase family 39 protein;protein_id=WP_041817681.1;transl_table=11
NC_015978.1	RefSeq	gene	555354	556136	.	-	.	ID=gene-LSA_RS02800;Name=LSA_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02800;old_locus_tag=LSA_05680
NC_015978.1	GeneMarkS-2+	CDS	555354	556136	.	-	0	ID=cds-WP_041817683.1;Parent=gene-LSA_RS02800;Dbxref=Genbank:WP_041817683.1;Name=WP_041817683.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS02800;product=hypothetical protein;protein_id=WP_041817683.1;transl_table=11
NC_015978.1	RefSeq	gene	556154	556429	.	-	.	ID=gene-LSA_RS02805;Name=LSA_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02805;old_locus_tag=LSA_05690
NC_015978.1	GeneMarkS-2+	CDS	556154	556429	.	-	0	ID=cds-WP_041817685.1;Parent=gene-LSA_RS02805;Dbxref=Genbank:WP_041817685.1;Name=WP_041817685.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS02805;product=hypothetical protein;protein_id=WP_041817685.1;transl_table=11
NC_015978.1	RefSeq	gene	556648	557109	.	+	.	ID=gene-LSA_RS02810;Name=LSA_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02810;old_locus_tag=LSA_05700
NC_015978.1	Protein Homology	CDS	556648	557109	.	+	0	ID=cds-WP_225361785.1;Parent=gene-LSA_RS02810;Dbxref=Genbank:WP_225361785.1;Name=WP_225361785.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014856.2;locus_tag=LSA_RS02810;product=hypothetical protein;protein_id=WP_225361785.1;transl_table=11
NC_015978.1	RefSeq	gene	557136	558797	.	+	.	ID=gene-LSA_RS02815;Name=LSA_RS02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02815;old_locus_tag=LSA_05710
NC_015978.1	Protein Homology	CDS	557136	558797	.	+	0	ID=cds-WP_014081861.1;Parent=gene-LSA_RS02815;Dbxref=Genbank:WP_014081861.1;Name=WP_014081861.1;Ontology_term=GO:0004329,GO:0005524;gbkey=CDS;go_function=formate-tetrahydrofolate ligase activity|0004329||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010017346.1;locus_tag=LSA_RS02815;product=formate--tetrahydrofolate ligase;protein_id=WP_014081861.1;transl_table=11
NC_015978.1	RefSeq	gene	558862	560157	.	+	.	ID=gene-LSA_RS02820;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=LSA_RS02820;old_locus_tag=LSA_05720
NC_015978.1	Protein Homology	CDS	558862	560157	.	+	0	ID=cds-WP_014081862.1;Parent=gene-LSA_RS02820;Dbxref=Genbank:WP_014081862.1;Name=WP_014081862.1;Ontology_term=GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008856019.1;locus_tag=LSA_RS02820;product=adenylosuccinate lyase;protein_id=WP_014081862.1;transl_table=11
NC_015978.1	RefSeq	gene	560229	560792	.	-	.	ID=gene-LSA_RS02825;Name=LSA_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02825;old_locus_tag=LSA_05730
NC_015978.1	Protein Homology	CDS	560229	560792	.	-	0	ID=cds-WP_041817686.1;Parent=gene-LSA_RS02825;Dbxref=Genbank:WP_041817686.1;Name=WP_041817686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010493003.1;locus_tag=LSA_RS02825;product=DNA-3-methyladenine glycosylase I;protein_id=WP_041817686.1;transl_table=11
NC_015978.1	RefSeq	gene	561087	561422	.	+	.	ID=gene-LSA_RS02830;Name=LSA_RS02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02830;old_locus_tag=LSA_05740
NC_015978.1	GeneMarkS-2+	CDS	561087	561422	.	+	0	ID=cds-WP_041817688.1;Parent=gene-LSA_RS02830;Dbxref=Genbank:WP_041817688.1;Name=WP_041817688.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS02830;product=hypothetical protein;protein_id=WP_041817688.1;transl_table=11
NC_015978.1	RefSeq	gene	561505	561768	.	+	.	ID=gene-LSA_RS02835;Name=LSA_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02835;old_locus_tag=LSA_05750
NC_015978.1	GeneMarkS-2+	CDS	561505	561768	.	+	0	ID=cds-WP_014081864.1;Parent=gene-LSA_RS02835;Dbxref=Genbank:WP_014081864.1;Name=WP_014081864.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS02835;product=hypothetical protein;protein_id=WP_014081864.1;transl_table=11
NC_015978.1	RefSeq	gene	562221	562589	.	-	.	ID=gene-LSA_RS07435;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=LSA_RS07435
NC_015978.1	cmsearch	tmRNA	562221	562589	.	-	.	ID=rna-LSA_RS07435;Parent=gene-LSA_RS07435;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS07435;product=transfer-messenger RNA
NC_015978.1	cmsearch	exon	562221	562589	.	-	.	ID=exon-LSA_RS07435-1;Parent=rna-LSA_RS07435;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS07435;product=transfer-messenger RNA
NC_015978.1	RefSeq	gene	562625	563398	.	-	.	ID=gene-LSA_RS02840;Name=LSA_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02840;old_locus_tag=LSA_05760
NC_015978.1	Protein Homology	CDS	562625	563398	.	-	0	ID=cds-WP_014081865.1;Parent=gene-LSA_RS02840;Dbxref=Genbank:WP_014081865.1;Name=WP_014081865.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167315.1;locus_tag=LSA_RS02840;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_014081865.1;transl_table=11
NC_015978.1	RefSeq	gene	563517	564692	.	+	.	ID=gene-LSA_RS02845;Name=LSA_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02845;old_locus_tag=LSA_05770
NC_015978.1	Protein Homology	CDS	563517	564692	.	+	0	ID=cds-WP_103434647.1;Parent=gene-LSA_RS02845;Dbxref=Genbank:WP_103434647.1;Name=WP_103434647.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021923.1;locus_tag=LSA_RS02845;product=class I SAM-dependent methyltransferase;protein_id=WP_103434647.1;transl_table=11
NC_015978.1	RefSeq	gene	564811	565695	.	+	.	ID=gene-LSA_RS02850;Name=LSA_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02850;old_locus_tag=LSA_05780
NC_015978.1	Protein Homology	CDS	564811	565695	.	+	0	ID=cds-WP_014081867.1;Parent=gene-LSA_RS02850;Dbxref=Genbank:WP_014081867.1;Name=WP_014081867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167313.1;locus_tag=LSA_RS02850;product=ROK family protein;protein_id=WP_014081867.1;transl_table=11
NC_015978.1	RefSeq	gene	565720	567075	.	+	.	ID=gene-LSA_RS02855;Name=LSA_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02855;old_locus_tag=LSA_05790
NC_015978.1	Protein Homology	CDS	565720	567075	.	+	0	ID=cds-WP_014081868.1;Parent=gene-LSA_RS02855;Dbxref=Genbank:WP_014081868.1;Name=WP_014081868.1;Ontology_term=GO:0006096,GO:0004347;gbkey=CDS;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167312.1;locus_tag=LSA_RS02855;product=glucose-6-phosphate isomerase;protein_id=WP_014081868.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	567174	568580	.	+	.	ID=gene-LSA_RS02860;Name=LSA_RS02860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS02860;old_locus_tag=LSA_05810;pseudo=true
NC_015978.1	Protein Homology	CDS	567174	568580	.	+	0	ID=cds-LSA_RS02860;Parent=gene-LSA_RS02860;Note=frameshifted%3B internal stop;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010621965.1;locus_tag=LSA_RS02860;product=alpha-amylase family glycosyl hydrolase;pseudo=true;transl_table=11
NC_015978.1	RefSeq	gene	568643	569974	.	+	.	ID=gene-LSA_RS02865;Name=LSA_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02865;old_locus_tag=LSA_05820
NC_015978.1	Protein Homology	CDS	568643	569974	.	+	0	ID=cds-WP_014081870.1;Parent=gene-LSA_RS02865;Dbxref=Genbank:WP_014081870.1;Name=WP_014081870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010621901.1;locus_tag=LSA_RS02865;product=replication-associated recombination protein A;protein_id=WP_014081870.1;transl_table=11
NC_015978.1	RefSeq	gene	569997	570119	.	-	.	ID=gene-LSA_RS07745;Name=LSA_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07745;old_locus_tag=LSA_05830
NC_015978.1	Protein Homology	CDS	569997	570119	.	-	0	ID=cds-WP_014081871.1;Parent=gene-LSA_RS07745;Dbxref=Genbank:WP_014081871.1;Name=WP_014081871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010708761.1;locus_tag=LSA_RS07745;product=putative metal homeostasis protein;protein_id=WP_014081871.1;transl_table=11
NC_015978.1	RefSeq	gene	570145	570330	.	-	.	ID=gene-LSA_RS02870;Name=LSA_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02870;old_locus_tag=LSA_05840
NC_015978.1	Protein Homology	CDS	570145	570330	.	-	0	ID=cds-WP_014081872.1;Parent=gene-LSA_RS02870;Dbxref=Genbank:WP_014081872.1;Name=WP_014081872.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002946164.1;locus_tag=LSA_RS02870;product=type Z 30S ribosomal protein S14;protein_id=WP_014081872.1;transl_table=11
NC_015978.1	RefSeq	gene	570526	571728	.	+	.	ID=gene-LSA_RS07260;Name=LSA_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07260;old_locus_tag=LSA_05850
NC_015978.1	Protein Homology	CDS	570526	571728	.	+	0	ID=cds-WP_049777602.1;Parent=gene-LSA_RS07260;Dbxref=Genbank:WP_049777602.1;Name=WP_049777602.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013073.2;locus_tag=LSA_RS07260;product=NlpC/P60 family protein;protein_id=WP_049777602.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	571786	572115	.	-	.	ID=gene-LSA_RS02880;Name=LSA_RS02880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS02880;old_locus_tag=LSA_05860;pseudo=true
NC_015978.1	Protein Homology	CDS	571786	572115	.	-	0	ID=cds-LSA_RS02880;Parent=gene-LSA_RS02880;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008842352.1;locus_tag=LSA_RS02880;product=MazG-like family protein;pseudo=true;transl_table=11
NC_015978.1	RefSeq	gene	572168	573109	.	-	.	ID=gene-LSA_RS02885;Name=LSA_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02885;old_locus_tag=LSA_05870
NC_015978.1	Protein Homology	CDS	572168	573109	.	-	0	ID=cds-WP_014081873.1;Parent=gene-LSA_RS02885;Dbxref=Genbank:WP_014081873.1;Name=WP_014081873.1;Ontology_term=GO:0006221,GO:0004152;gbkey=CDS;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022295.1;locus_tag=LSA_RS02885;product=dihydroorotate oxidase;protein_id=WP_014081873.1;transl_table=11
NC_015978.1	RefSeq	gene	573474	574418	.	+	.	ID=gene-LSA_RS02890;Name=LSA_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02890;old_locus_tag=LSA_05880
NC_015978.1	Protein Homology	CDS	573474	574418	.	+	0	ID=cds-WP_014081874.1;Parent=gene-LSA_RS02890;Dbxref=Genbank:WP_014081874.1;Name=WP_014081874.1;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,cellular amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022294.1;locus_tag=LSA_RS02890;product=aspartate carbamoyltransferase catalytic subunit;protein_id=WP_014081874.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	574421	575691	.	+	.	ID=gene-LSA_RS02895;Name=LSA_RS02895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS02895;old_locus_tag=LSA_05900;pseudo=true
NC_015978.1	Protein Homology	CDS	574421	575691	.	+	0	ID=cds-LSA_RS02895;Parent=gene-LSA_RS02895;Note=frameshifted;Ontology_term=GO:0006221,GO:0004151,GO:0046872;gbkey=CDS;go_function=dihydroorotase activity|0004151||IEA,metal ion binding|0046872||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004046023.1;locus_tag=LSA_RS02895;product=dihydroorotase;pseudo=true;transl_table=11
NC_015978.1	RefSeq	gene	575781	576635	.	+	.	ID=gene-LSA_RS02900;Name=LSA_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02900;old_locus_tag=LSA_05910
NC_015978.1	Protein Homology	CDS	575781	576635	.	+	0	ID=cds-WP_049777603.1;Parent=gene-LSA_RS02900;Dbxref=Genbank:WP_049777603.1;Name=WP_049777603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004270973.1;locus_tag=LSA_RS02900;product=DNA/RNA non-specific endonuclease;protein_id=WP_049777603.1;transl_table=11
NC_015978.1	RefSeq	gene	576730	578184	.	+	.	ID=gene-LSA_RS02905;Name=LSA_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02905;old_locus_tag=LSA_05920
NC_015978.1	Protein Homology	CDS	576730	578184	.	+	0	ID=cds-WP_041817689.1;Parent=gene-LSA_RS02905;Dbxref=Genbank:WP_041817689.1;Name=WP_041817689.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022351.1;locus_tag=LSA_RS02905;product=amino acid permease;protein_id=WP_041817689.1;transl_table=11
NC_015978.1	RefSeq	gene	578575	578820	.	+	.	ID=gene-LSA_RS02910;Name=LSA_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02910;old_locus_tag=LSA_05930
NC_015978.1	GeneMarkS-2+	CDS	578575	578820	.	+	0	ID=cds-WP_014081876.1;Parent=gene-LSA_RS02910;Dbxref=Genbank:WP_014081876.1;Name=WP_014081876.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS02910;product=hypothetical protein;protein_id=WP_014081876.1;transl_table=11
NC_015978.1	RefSeq	gene	578962	579324	.	+	.	ID=gene-LSA_RS02915;Name=LSA_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02915;old_locus_tag=LSA_05940
NC_015978.1	Protein Homology	CDS	578962	579324	.	+	0	ID=cds-WP_049777604.1;Parent=gene-LSA_RS02915;Dbxref=Genbank:WP_049777604.1;Name=WP_049777604.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024212.2;locus_tag=LSA_RS02915;product=MarR family transcriptional regulator;protein_id=WP_049777604.1;transl_table=11
NC_015978.1	RefSeq	gene	579485	581011	.	+	.	ID=gene-LSA_RS02920;Name=LSA_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02920;old_locus_tag=LSA_05950
NC_015978.1	Protein Homology	CDS	579485	581011	.	+	0	ID=cds-WP_041817691.1;Parent=gene-LSA_RS02920;Dbxref=Genbank:WP_041817691.1;Name=WP_041817691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021625.1;locus_tag=LSA_RS02920;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_041817691.1;transl_table=11
NC_015978.1	RefSeq	gene	581050	581382	.	-	.	ID=gene-LSA_RS02925;Name=LSA_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02925;old_locus_tag=LSA_05960
NC_015978.1	Protein Homology	CDS	581050	581382	.	-	0	ID=cds-WP_014081878.1;Parent=gene-LSA_RS02925;Dbxref=Genbank:WP_014081878.1;Name=WP_014081878.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019100.2;locus_tag=LSA_RS02925;product=DUF1516 family protein;protein_id=WP_014081878.1;transl_table=11
NC_015978.1	RefSeq	gene	581472	581542	.	+	.	ID=gene-LSA_RS02930;Name=LSA_RS02930;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS02930;old_locus_tag=LSA_R00310
NC_015978.1	tRNAscan-SE	tRNA	581472	581542	.	+	.	ID=rna-LSA_RS02930;Parent=gene-LSA_RS02930;anticodon=(pos:581504..581506);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS02930;product=tRNA-Gly
NC_015978.1	tRNAscan-SE	exon	581472	581542	.	+	.	ID=exon-LSA_RS02930-1;Parent=rna-LSA_RS02930;anticodon=(pos:581504..581506);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS02930;product=tRNA-Gly
NC_015978.1	RefSeq	gene	581765	583456	.	+	.	ID=gene-LSA_RS02935;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=LSA_RS02935;old_locus_tag=LSA_05970
NC_015978.1	Protein Homology	CDS	581765	583456	.	+	0	ID=cds-WP_014081879.1;Parent=gene-LSA_RS02935;Dbxref=Genbank:WP_014081879.1;Name=WP_014081879.1;Ontology_term=GO:0006420,GO:0004814,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000385013.1;locus_tag=LSA_RS02935;product=arginine--tRNA ligase;protein_id=WP_014081879.1;transl_table=11
NC_015978.1	RefSeq	gene	583622	585739	.	+	.	ID=gene-LSA_RS02940;Name=LSA_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02940;old_locus_tag=LSA_05980
NC_015978.1	Protein Homology	CDS	583622	585739	.	+	0	ID=cds-WP_180993643.1;Parent=gene-LSA_RS02940;Dbxref=Genbank:WP_180993643.1;Name=WP_180993643.1;Ontology_term=GO:0008658;gbkey=CDS;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166730.1;locus_tag=LSA_RS02940;product=PBP1A family penicillin-binding protein;protein_id=WP_180993643.1;transl_table=11
NC_015978.1	RefSeq	gene	585793	586140	.	+	.	ID=gene-LSA_RS02945;Name=LSA_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02945;old_locus_tag=LSA_05990
NC_015978.1	Protein Homology	CDS	585793	586140	.	+	0	ID=cds-WP_014081881.1;Parent=gene-LSA_RS02945;Dbxref=Genbank:WP_014081881.1;Name=WP_014081881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021616.1;locus_tag=LSA_RS02945;product=YlbF family regulator;protein_id=WP_014081881.1;transl_table=11
NC_015978.1	RefSeq	gene	586201	587433	.	+	.	ID=gene-LSA_RS02950;Name=LSA_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02950;old_locus_tag=LSA_06000
NC_015978.1	Protein Homology	CDS	586201	587433	.	+	0	ID=cds-WP_041817693.1;Parent=gene-LSA_RS02950;Dbxref=Genbank:WP_041817693.1;Name=WP_041817693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021615.1;locus_tag=LSA_RS02950;product=DNA repair exonuclease;protein_id=WP_041817693.1;transl_table=11
NC_015978.1	RefSeq	gene	587423	589954	.	+	.	ID=gene-LSA_RS02955;Name=LSA_RS02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02955;old_locus_tag=LSA_06010
NC_015978.1	Protein Homology	CDS	587423	589954	.	+	0	ID=cds-WP_014081883.1;Parent=gene-LSA_RS02955;Dbxref=Genbank:WP_014081883.1;Name=WP_014081883.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024867.2;locus_tag=LSA_RS02955;product=AAA family ATPase;protein_id=WP_014081883.1;transl_table=11
NC_015978.1	RefSeq	gene	589999	590886	.	-	.	ID=gene-LSA_RS02960;Name=LSA_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02960;old_locus_tag=LSA_06020
NC_015978.1	Protein Homology	CDS	589999	590886	.	-	0	ID=cds-WP_041817694.1;Parent=gene-LSA_RS02960;Dbxref=Genbank:WP_041817694.1;Name=WP_041817694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021610.1;locus_tag=LSA_RS02960;product=peptidylprolyl isomerase;protein_id=WP_041817694.1;transl_table=11
NC_015978.1	RefSeq	gene	591011	591442	.	-	.	ID=gene-LSA_RS02965;Name=LSA_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02965;old_locus_tag=LSA_06030
NC_015978.1	Protein Homology	CDS	591011	591442	.	-	0	ID=cds-WP_041817695.1;Parent=gene-LSA_RS02965;Dbxref=Genbank:WP_041817695.1;Name=WP_041817695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021608.1;locus_tag=LSA_RS02965;product=HIT family protein;protein_id=WP_041817695.1;transl_table=11
NC_015978.1	RefSeq	gene	591548	592288	.	+	.	ID=gene-LSA_RS02970;Name=LSA_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02970;old_locus_tag=LSA_06040
NC_015978.1	Protein Homology	CDS	591548	592288	.	+	0	ID=cds-WP_014081886.1;Parent=gene-LSA_RS02970;Dbxref=Genbank:WP_014081886.1;Name=WP_014081886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003233230.1;locus_tag=LSA_RS02970;product=ABC transporter ATP-binding protein;protein_id=WP_014081886.1;transl_table=11
NC_015978.1	RefSeq	gene	592281	593483	.	+	.	ID=gene-LSA_RS02975;Name=LSA_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02975;old_locus_tag=LSA_06050
NC_015978.1	Protein Homology	CDS	592281	593483	.	+	0	ID=cds-WP_014081887.1;Parent=gene-LSA_RS02975;Dbxref=Genbank:WP_014081887.1;Name=WP_014081887.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017759.2;locus_tag=LSA_RS02975;product=ABC transporter permease;protein_id=WP_014081887.1;transl_table=11
NC_015978.1	RefSeq	gene	593505	594146	.	+	.	ID=gene-LSA_RS02980;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=LSA_RS02980;old_locus_tag=LSA_06060
NC_015978.1	Protein Homology	CDS	593505	594146	.	+	0	ID=cds-WP_014081888.1;Parent=gene-LSA_RS02980;Dbxref=Genbank:WP_014081888.1;Name=WP_014081888.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine-N7-)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002833782.1;locus_tag=LSA_RS02980;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_014081888.1;transl_table=11
NC_015978.1	RefSeq	gene	594159	594473	.	-	.	ID=gene-LSA_RS02985;Name=LSA_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02985;old_locus_tag=LSA_06070
NC_015978.1	GeneMarkS-2+	CDS	594159	594473	.	-	0	ID=cds-WP_014081889.1;Parent=gene-LSA_RS02985;Dbxref=Genbank:WP_014081889.1;Name=WP_014081889.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS02985;product=hypothetical protein;protein_id=WP_014081889.1;transl_table=11
NC_015978.1	RefSeq	gene	594539	594892	.	+	.	ID=gene-LSA_RS02990;Name=LSA_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02990;old_locus_tag=LSA_06080
NC_015978.1	Protein Homology	CDS	594539	594892	.	+	0	ID=cds-WP_014081890.1;Parent=gene-LSA_RS02990;Dbxref=Genbank:WP_014081890.1;Name=WP_014081890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021602.1;locus_tag=LSA_RS02990;product=thioredoxin family protein;protein_id=WP_014081890.1;transl_table=11
NC_015978.1	RefSeq	gene	594910	595548	.	+	.	ID=gene-LSA_RS02995;Name=LSA_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS02995;old_locus_tag=LSA_06090
NC_015978.1	Protein Homology	CDS	594910	595548	.	+	0	ID=cds-WP_041817697.1;Parent=gene-LSA_RS02995;Dbxref=Genbank:WP_041817697.1;Name=WP_041817697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021601.1;locus_tag=LSA_RS02995;product=DUF4479 and tRNA-binding domain-containing protein;protein_id=WP_041817697.1;transl_table=11
NC_015978.1	RefSeq	gene	595594	597885	.	+	.	ID=gene-LSA_RS03000;Name=LSA_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03000;old_locus_tag=LSA_06100
NC_015978.1	Protein Homology	CDS	595594	597885	.	+	0	ID=cds-WP_041817698.1;Parent=gene-LSA_RS03000;Dbxref=Genbank:WP_041817698.1;Name=WP_041817698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021600.1;locus_tag=LSA_RS03000;product=DNA translocase FtsK;protein_id=WP_041817698.1;transl_table=11
NC_015978.1	RefSeq	gene	597984	599300	.	+	.	ID=gene-LSA_RS03005;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=LSA_RS03005;old_locus_tag=LSA_06110
NC_015978.1	Protein Homology	CDS	597984	599300	.	+	0	ID=cds-WP_041818078.1;Parent=gene-LSA_RS03005;Dbxref=Genbank:WP_041818078.1;Name=WP_041818078.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014940048.1;locus_tag=LSA_RS03005;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_041818078.1;transl_table=11
NC_015978.1	RefSeq	gene	599386	602085	.	+	.	ID=gene-LSA_RS03010;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=LSA_RS03010;old_locus_tag=LSA_06120
NC_015978.1	Protein Homology	CDS	599386	602085	.	+	0	ID=cds-WP_014081893.1;Parent=gene-LSA_RS03010;Dbxref=Genbank:WP_014081893.1;Name=WP_014081893.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021597.1;locus_tag=LSA_RS03010;product=DNA polymerase I;protein_id=WP_014081893.1;transl_table=11
NC_015978.1	RefSeq	gene	602104	602946	.	+	.	ID=gene-LSA_RS03015;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=LSA_RS03015;old_locus_tag=LSA_06130
NC_015978.1	Protein Homology	CDS	602104	602946	.	+	0	ID=cds-WP_041817699.1;Parent=gene-LSA_RS03015;Dbxref=Genbank:WP_041817699.1;Name=WP_041817699.1;Ontology_term=GO:0006281,GO:0008534,GO:0005737;gbkey=CDS;gene=mutM;go_component=cytoplasm|0005737||IEA;go_function=oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003560754.1;locus_tag=LSA_RS03015;product=DNA-formamidopyrimidine glycosylase;protein_id=WP_041817699.1;transl_table=11
NC_015978.1	RefSeq	gene	602939	603511	.	+	.	ID=gene-LSA_RS03020;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=LSA_RS03020;old_locus_tag=LSA_06140
NC_015978.1	Protein Homology	CDS	602939	603511	.	+	0	ID=cds-WP_014081895.1;Parent=gene-LSA_RS03020;Dbxref=Genbank:WP_014081895.1;Name=WP_014081895.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: protein motif:HMM:TIGR00152.1;locus_tag=LSA_RS03020;product=dephospho-CoA kinase;protein_id=WP_014081895.1;transl_table=11
NC_015978.1	RefSeq	gene	603516	604004	.	+	.	ID=gene-LSA_RS03025;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=LSA_RS03025;old_locus_tag=LSA_06150
NC_015978.1	Protein Homology	CDS	603516	604004	.	+	0	ID=cds-WP_014081896.1;Parent=gene-LSA_RS03025;Dbxref=Genbank:WP_014081896.1;Name=WP_014081896.1;Ontology_term=GO:0006355,GO:0140110;gbkey=CDS;gene=nrdR;go_function=transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021591.1;locus_tag=LSA_RS03025;product=transcriptional regulator NrdR;protein_id=WP_014081896.1;transl_table=11
NC_015978.1	RefSeq	gene	604001	605329	.	+	.	ID=gene-LSA_RS03030;Name=LSA_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03030;old_locus_tag=LSA_06160
NC_015978.1	Protein Homology	CDS	604001	605329	.	+	0	ID=cds-WP_041817701.1;Parent=gene-LSA_RS03030;Dbxref=Genbank:WP_041817701.1;Name=WP_041817701.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018914.2;locus_tag=LSA_RS03030;product=DnaD domain protein;protein_id=WP_041817701.1;transl_table=11
NC_015978.1	RefSeq	gene	605341	606279	.	+	.	ID=gene-LSA_RS03035;Name=dnaI;gbkey=Gene;gene=dnaI;gene_biotype=protein_coding;locus_tag=LSA_RS03035;old_locus_tag=LSA_06170
NC_015978.1	Protein Homology	CDS	605341	606279	.	+	0	ID=cds-WP_014081898.1;Parent=gene-LSA_RS03035;Dbxref=Genbank:WP_014081898.1;Name=WP_014081898.1;gbkey=CDS;gene=dnaI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014124876.1;locus_tag=LSA_RS03035;product=primosomal protein DnaI;protein_id=WP_014081898.1;transl_table=11
NC_015978.1	RefSeq	gene	606539	608512	.	+	.	ID=gene-LSA_RS03040;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=LSA_RS03040;old_locus_tag=LSA_06180
NC_015978.1	Protein Homology	CDS	606539	608512	.	+	0	ID=cds-WP_014081899.1;Parent=gene-LSA_RS03040;Dbxref=Genbank:WP_014081899.1;Name=WP_014081899.1;Ontology_term=GO:0006435,GO:0004829,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002833794.1;locus_tag=LSA_RS03040;product=threonine--tRNA ligase;protein_id=WP_014081899.1;transl_table=11
NC_015978.1	cmsearch	sequence_feature	608530	608654	.	+	.	ID=id-NC_015978.1:608530..608654;Dbxref=RFAM:RF00558;Note=ribosomal protein L20 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1
NC_015978.1	RefSeq	gene	608697	609203	.	+	.	ID=gene-LSA_RS03045;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=LSA_RS03045;old_locus_tag=LSA_06190
NC_015978.1	Protein Homology	CDS	608697	609203	.	+	0	ID=cds-WP_041817703.1;Parent=gene-LSA_RS03045;Dbxref=Genbank:WP_041817703.1;Name=WP_041817703.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021584.1;locus_tag=LSA_RS03045;product=translation initiation factor IF-3;protein_id=WP_041817703.1;transl_table=11
NC_015978.1	RefSeq	gene	609237	609431	.	+	.	ID=gene-LSA_RS03050;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=LSA_RS03050;old_locus_tag=LSA_06200
NC_015978.1	Protein Homology	CDS	609237	609431	.	+	0	ID=cds-WP_014081901.1;Parent=gene-LSA_RS03050;Dbxref=Genbank:WP_014081901.1;Name=WP_014081901.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmI;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011667797.1;locus_tag=LSA_RS03050;product=50S ribosomal protein L35;protein_id=WP_014081901.1;transl_table=11
NC_015978.1	RefSeq	gene	609455	609808	.	+	.	ID=gene-LSA_RS03055;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=LSA_RS03055;old_locus_tag=LSA_06210
NC_015978.1	Protein Homology	CDS	609455	609808	.	+	0	ID=cds-WP_014081902.1;Parent=gene-LSA_RS03055;Dbxref=Genbank:WP_014081902.1;Name=WP_014081902.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplT;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002831385.1;locus_tag=LSA_RS03055;product=50S ribosomal protein L20;protein_id=WP_014081902.1;transl_table=11
NC_015978.1	RefSeq	gene	609932	610459	.	+	.	ID=gene-LSA_RS03060;Name=LSA_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03060;old_locus_tag=LSA_06220
NC_015978.1	Protein Homology	CDS	609932	610459	.	+	0	ID=cds-WP_041817705.1;Parent=gene-LSA_RS03060;Dbxref=Genbank:WP_041817705.1;Name=WP_041817705.1;Ontology_term=GO:0008962;gbkey=CDS;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021581.1;locus_tag=LSA_RS03060;product=YqeG family HAD IIIA-type phosphatase;protein_id=WP_041817705.1;transl_table=11
NC_015978.1	RefSeq	gene	610459	611592	.	+	.	ID=gene-LSA_RS03065;Name=yqeH;gbkey=Gene;gene=yqeH;gene_biotype=protein_coding;locus_tag=LSA_RS03065;old_locus_tag=LSA_06230
NC_015978.1	Protein Homology	CDS	610459	611592	.	+	0	ID=cds-WP_041817706.1;Parent=gene-LSA_RS03065;Dbxref=Genbank:WP_041817706.1;Name=WP_041817706.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=yqeH;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166754.1;locus_tag=LSA_RS03065;product=ribosome biogenesis GTPase YqeH;protein_id=WP_041817706.1;transl_table=11
NC_015978.1	RefSeq	gene	611602	611913	.	+	.	ID=gene-LSA_RS03070;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=LSA_RS03070;old_locus_tag=LSA_06240
NC_015978.1	Protein Homology	CDS	611602	611913	.	+	0	ID=cds-WP_014081905.1;Parent=gene-LSA_RS03070;Dbxref=Genbank:WP_014081905.1;Name=WP_014081905.1;Ontology_term=GO:0008150,GO:0003723,GO:0005737;gbkey=CDS;gene=yhbY;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003554350.1;locus_tag=LSA_RS03070;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_014081905.1;transl_table=11
NC_015978.1	RefSeq	gene	611938	612489	.	+	.	ID=gene-LSA_RS03075;Name=LSA_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03075;old_locus_tag=LSA_06250
NC_015978.1	Protein Homology	CDS	611938	612489	.	+	0	ID=cds-WP_014081906.1;Parent=gene-LSA_RS03075;Dbxref=Genbank:WP_014081906.1;Name=WP_014081906.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021577.1;locus_tag=LSA_RS03075;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_014081906.1;transl_table=11
NC_015978.1	RefSeq	gene	612482	613084	.	+	.	ID=gene-LSA_RS03080;Name=yqeK;gbkey=Gene;gene=yqeK;gene_biotype=protein_coding;locus_tag=LSA_RS03080;old_locus_tag=LSA_06260
NC_015978.1	Protein Homology	CDS	612482	613084	.	+	0	ID=cds-WP_041817708.1;Parent=gene-LSA_RS03080;Dbxref=Genbank:WP_041817708.1;Name=WP_041817708.1;gbkey=CDS;gene=yqeK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021576.1;locus_tag=LSA_RS03080;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK;protein_id=WP_041817708.1;transl_table=11
NC_015978.1	RefSeq	gene	613093	613452	.	+	.	ID=gene-LSA_RS03085;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=LSA_RS03085;old_locus_tag=LSA_06270
NC_015978.1	Protein Homology	CDS	613093	613452	.	+	0	ID=cds-WP_014081908.1;Parent=gene-LSA_RS03085;Dbxref=Genbank:WP_014081908.1;Name=WP_014081908.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166758.1;locus_tag=LSA_RS03085;product=ribosome silencing factor;protein_id=WP_014081908.1;transl_table=11
NC_015978.1	RefSeq	gene	613455	614192	.	+	.	ID=gene-LSA_RS03090;Name=LSA_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03090;old_locus_tag=LSA_06280
NC_015978.1	Protein Homology	CDS	613455	614192	.	+	0	ID=cds-WP_014081909.1;Parent=gene-LSA_RS03090;Dbxref=Genbank:WP_014081909.1;Name=WP_014081909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021574.1;locus_tag=LSA_RS03090;product=class I SAM-dependent methyltransferase;protein_id=WP_014081909.1;transl_table=11
NC_015978.1	RefSeq	gene	614195	615328	.	+	.	ID=gene-LSA_RS03095;Name=LSA_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03095;old_locus_tag=LSA_06290
NC_015978.1	Protein Homology	CDS	614195	615328	.	+	0	ID=cds-WP_014081910.1;Parent=gene-LSA_RS03095;Dbxref=Genbank:WP_014081910.1;Name=WP_014081910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021573.1;locus_tag=LSA_RS03095;product=nucleotidyltransferase;protein_id=WP_014081910.1;transl_table=11
NC_015978.1	RefSeq	gene	615408	615965	.	+	.	ID=gene-LSA_RS03100;Name=LSA_RS03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03100;old_locus_tag=LSA_06300
NC_015978.1	Protein Homology	CDS	615408	615965	.	+	0	ID=cds-WP_014081911.1;Parent=gene-LSA_RS03100;Dbxref=Genbank:WP_014081911.1;Name=WP_014081911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021572.1;locus_tag=LSA_RS03100;product=DUF177 domain-containing protein;protein_id=WP_014081911.1;transl_table=11
NC_015978.1	RefSeq	gene	616009	616191	.	+	.	ID=gene-LSA_RS03105;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=LSA_RS03105;old_locus_tag=LSA_06310
NC_015978.1	Protein Homology	CDS	616009	616191	.	+	0	ID=cds-WP_014081912.1;Parent=gene-LSA_RS03105;Dbxref=Genbank:WP_014081912.1;Name=WP_014081912.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmF;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003683731.1;locus_tag=LSA_RS03105;product=50S ribosomal protein L32;protein_id=WP_014081912.1;transl_table=11
NC_015978.1	RefSeq	gene	616403	617101	.	+	.	ID=gene-LSA_RS03110;Name=LSA_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03110;old_locus_tag=LSA_06320
NC_015978.1	Protein Homology	CDS	616403	617101	.	+	0	ID=cds-WP_014081913.1;Parent=gene-LSA_RS03110;Dbxref=Genbank:WP_014081913.1;Name=WP_014081913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166766.1;locus_tag=LSA_RS03110;product=Bax inhibitor-1/YccA family protein;protein_id=WP_014081913.1;transl_table=11
NC_015978.1	RefSeq	gene	617180	618100	.	-	.	ID=gene-LSA_RS03115;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=LSA_RS03115;old_locus_tag=LSA_06330
NC_015978.1	Protein Homology	CDS	617180	618100	.	-	0	ID=cds-WP_014081914.1;Parent=gene-LSA_RS03115;Dbxref=Genbank:WP_014081914.1;Name=WP_014081914.1;Ontology_term=GO:0051205,GO:0003674,GO:0031224;gbkey=CDS;gene=yidC;go_component=intrinsic component of membrane|0031224||IEA;go_function=molecular_function|0003674||IEA;go_process=protein insertion into membrane|0051205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010619944.1;locus_tag=LSA_RS03115;product=membrane protein insertase YidC;protein_id=WP_014081914.1;transl_table=11
NC_015978.1	RefSeq	gene	618348	619115	.	+	.	ID=gene-LSA_RS03120;Name=LSA_RS03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03120;old_locus_tag=LSA_06340
NC_015978.1	Protein Homology	CDS	618348	619115	.	+	0	ID=cds-WP_041817709.1;Parent=gene-LSA_RS03120;Dbxref=Genbank:WP_041817709.1;Name=WP_041817709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003640308.1;locus_tag=LSA_RS03120;product=RNA methyltransferase;protein_id=WP_041817709.1;transl_table=11
NC_015978.1	RefSeq	gene	619131	619637	.	+	.	ID=gene-LSA_RS03125;Name=LSA_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03125;old_locus_tag=LSA_06350
NC_015978.1	Protein Homology	CDS	619131	619637	.	+	0	ID=cds-WP_014081916.1;Parent=gene-LSA_RS03125;Dbxref=Genbank:WP_014081916.1;Name=WP_014081916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003554322.1;locus_tag=LSA_RS03125;product=HDIG domain-containing protein;protein_id=WP_014081916.1;transl_table=11
NC_015978.1	RefSeq	gene	619646	619993	.	+	.	ID=gene-LSA_RS03130;Name=LSA_RS03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03130;old_locus_tag=LSA_06360
NC_015978.1	Protein Homology	CDS	619646	619993	.	+	0	ID=cds-WP_014081917.1;Parent=gene-LSA_RS03130;Dbxref=Genbank:WP_014081917.1;Name=WP_014081917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006916324.1;locus_tag=LSA_RS03130;product=helix-turn-helix transcriptional regulator;protein_id=WP_014081917.1;transl_table=11
NC_015978.1	cmsearch	binding_site	620030	620230	.	+	.	ID=id-NC_015978.1:620030..620230;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1
NC_015978.1	RefSeq	gene	620273	621310	.	+	.	ID=gene-LSA_RS03135;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=LSA_RS03135;old_locus_tag=LSA_06370
NC_015978.1	Protein Homology	CDS	620273	621310	.	+	0	ID=cds-WP_014081918.1;Parent=gene-LSA_RS03135;Dbxref=Genbank:WP_014081918.1;Name=WP_014081918.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheS;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021563.1;locus_tag=LSA_RS03135;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_014081918.1;transl_table=11
NC_015978.1	RefSeq	gene	621326	623737	.	+	.	ID=gene-LSA_RS03140;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=LSA_RS03140;old_locus_tag=LSA_06380
NC_015978.1	Protein Homology	CDS	621326	623737	.	+	0	ID=cds-WP_014081919.1;Parent=gene-LSA_RS03140;Dbxref=Genbank:WP_014081919.1;Name=WP_014081919.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheT;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020280170.1;locus_tag=LSA_RS03140;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_014081919.1;transl_table=11
NC_015978.1	RefSeq	gene	623764	624420	.	+	.	ID=gene-LSA_RS03145;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=LSA_RS03145;old_locus_tag=LSA_06390
NC_015978.1	Protein Homology	CDS	623764	624420	.	+	0	ID=cds-WP_014081920.1;Parent=gene-LSA_RS03145;Dbxref=Genbank:WP_014081920.1;Name=WP_014081920.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021558.1;locus_tag=LSA_RS03145;product=uridine kinase;protein_id=WP_014081920.1;transl_table=11
NC_015978.1	RefSeq	gene	624488	624961	.	+	.	ID=gene-LSA_RS03150;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=LSA_RS03150;old_locus_tag=LSA_06400
NC_015978.1	Protein Homology	CDS	624488	624961	.	+	0	ID=cds-WP_014081921.1;Parent=gene-LSA_RS03150;Dbxref=Genbank:WP_014081921.1;Name=WP_014081921.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020280173.1;locus_tag=LSA_RS03150;product=transcription elongation factor GreA;protein_id=WP_014081921.1;transl_table=11
NC_015978.1	RefSeq	gene	625121	627181	.	+	.	ID=gene-LSA_RS03155;Name=LSA_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03155;old_locus_tag=LSA_06410
NC_015978.1	Protein Homology	CDS	625121	627181	.	+	0	ID=cds-WP_014081922.1;Parent=gene-LSA_RS03155;Dbxref=Genbank:WP_014081922.1;Name=WP_014081922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021555.1;locus_tag=LSA_RS03155;product=penicillin-binding protein 2;protein_id=WP_014081922.1;transl_table=11
NC_015978.1	RefSeq	gene	627304	627453	.	+	.	ID=gene-LSA_RS03160;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=LSA_RS03160;old_locus_tag=LSA_06420
NC_015978.1	Protein Homology	CDS	627304	627453	.	+	0	ID=cds-WP_014081923.1;Parent=gene-LSA_RS03160;Dbxref=Genbank:WP_014081923.1;Name=WP_014081923.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016172256.1;locus_tag=LSA_RS03160;product=50S ribosomal protein L33;protein_id=WP_014081923.1;transl_table=11
NC_015978.1	RefSeq	gene	627500	628042	.	+	.	ID=gene-LSA_RS03165;Name=LSA_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03165;old_locus_tag=LSA_06430
NC_015978.1	Protein Homology	CDS	627500	628042	.	+	0	ID=cds-WP_041817711.1;Parent=gene-LSA_RS03165;Dbxref=Genbank:WP_041817711.1;Name=WP_041817711.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: protein motif:HMM:TIGR02727.1;locus_tag=LSA_RS03165;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_041817711.1;transl_table=11
NC_015978.1	RefSeq	gene	628029	628703	.	+	.	ID=gene-LSA_RS03170;Name=LSA_RS03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03170;old_locus_tag=LSA_06440
NC_015978.1	Protein Homology	CDS	628029	628703	.	+	0	ID=cds-WP_103434648.1;Parent=gene-LSA_RS03170;Dbxref=Genbank:WP_103434648.1;Name=WP_103434648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021550.1;locus_tag=LSA_RS03170;product=rhomboid family intramembrane serine protease;protein_id=WP_103434648.1;transl_table=11
NC_015978.1	RefSeq	gene	628730	628957	.	+	.	ID=gene-LSA_RS03175;Name=LSA_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03175;old_locus_tag=LSA_06450
NC_015978.1	Protein Homology	CDS	628730	628957	.	+	0	ID=cds-WP_014081926.1;Parent=gene-LSA_RS03175;Dbxref=Genbank:WP_014081926.1;Name=WP_014081926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021549.1;locus_tag=LSA_RS03175;product=YqgQ family protein;protein_id=WP_014081926.1;transl_table=11
NC_015978.1	RefSeq	gene	628960	629925	.	+	.	ID=gene-LSA_RS03180;Name=LSA_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03180;old_locus_tag=LSA_06460
NC_015978.1	Protein Homology	CDS	628960	629925	.	+	0	ID=cds-WP_041817713.1;Parent=gene-LSA_RS03180;Dbxref=Genbank:WP_041817713.1;Name=WP_041817713.1;Ontology_term=GO:0006096,GO:0004340;gbkey=CDS;go_function=glucokinase activity|0004340||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166779.1;locus_tag=LSA_RS03180;product=ROK family glucokinase;protein_id=WP_041817713.1;transl_table=11
NC_015978.1	RefSeq	gene	629954	630367	.	+	.	ID=gene-LSA_RS03185;Name=LSA_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03185;old_locus_tag=LSA_06470
NC_015978.1	Protein Homology	CDS	629954	630367	.	+	0	ID=cds-WP_014081928.1;Parent=gene-LSA_RS03185;Dbxref=Genbank:WP_014081928.1;Name=WP_014081928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166780.1;locus_tag=LSA_RS03185;product=rhodanese-like domain-containing protein;protein_id=WP_014081928.1;transl_table=11
NC_015978.1	RefSeq	gene	630439	630615	.	-	.	ID=gene-LSA_RS07440;Name=LSA_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07440;old_locus_tag=LSA_06480
NC_015978.1	Protein Homology	CDS	630439	630615	.	-	0	ID=cds-WP_014081929.1;Parent=gene-LSA_RS07440;Dbxref=Genbank:WP_014081929.1;Name=WP_014081929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003638579.1;locus_tag=LSA_RS07440;product=DUF3042 family protein;protein_id=WP_014081929.1;transl_table=11
NC_015978.1	RefSeq	gene	630707	631618	.	+	.	ID=gene-LSA_RS03190;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=LSA_RS03190;old_locus_tag=LSA_06490
NC_015978.1	Protein Homology	CDS	630707	631618	.	+	0	ID=cds-WP_014081930.1;Parent=gene-LSA_RS03190;Dbxref=Genbank:WP_014081930.1;Name=WP_014081930.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021544.1;locus_tag=LSA_RS03190;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_014081930.1;transl_table=11
NC_015978.1	RefSeq	gene	631623	632141	.	+	.	ID=gene-LSA_RS03195;Name=LSA_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03195;old_locus_tag=LSA_06500
NC_015978.1	GeneMarkS-2+	CDS	631623	632141	.	+	0	ID=cds-WP_014081931.1;Parent=gene-LSA_RS03195;Dbxref=Genbank:WP_014081931.1;Name=WP_014081931.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS03195;product=hypothetical protein;protein_id=WP_014081931.1;transl_table=11
NC_015978.1	RefSeq	gene	632205	632278	.	+	.	ID=gene-LSA_RS03200;Name=LSA_RS03200;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS03200;old_locus_tag=LSA_R00320
NC_015978.1	tRNAscan-SE	tRNA	632205	632278	.	+	.	ID=rna-LSA_RS03200;Parent=gene-LSA_RS03200;anticodon=(pos:632239..632241);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS03200;product=tRNA-Arg
NC_015978.1	tRNAscan-SE	exon	632205	632278	.	+	.	ID=exon-LSA_RS03200-1;Parent=rna-LSA_RS03200;anticodon=(pos:632239..632241);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS03200;product=tRNA-Arg
NC_015978.1	cmsearch	sequence_feature	632367	632440	.	+	.	ID=id-NC_015978.1:632367..632440;Dbxref=RFAM:RF00559;Note=ribosomal protein L21 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1
NC_015978.1	RefSeq	gene	632461	632769	.	+	.	ID=gene-LSA_RS03205;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=LSA_RS03205;old_locus_tag=LSA_06510
NC_015978.1	Protein Homology	CDS	632461	632769	.	+	0	ID=cds-WP_041817715.1;Parent=gene-LSA_RS03205;Dbxref=Genbank:WP_041817715.1;Name=WP_041817715.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplU;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003664009.1;locus_tag=LSA_RS03205;product=50S ribosomal protein L21;protein_id=WP_041817715.1;transl_table=11
NC_015978.1	RefSeq	gene	632775	633095	.	+	.	ID=gene-LSA_RS03210;Name=LSA_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03210;old_locus_tag=LSA_06520
NC_015978.1	Protein Homology	CDS	632775	633095	.	+	0	ID=cds-WP_014081933.1;Parent=gene-LSA_RS03210;Dbxref=Genbank:WP_014081933.1;Name=WP_014081933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021540.1;locus_tag=LSA_RS03210;product=ribosomal-processing cysteine protease Prp;protein_id=WP_014081933.1;transl_table=11
NC_015978.1	RefSeq	gene	633121	633417	.	+	.	ID=gene-LSA_RS03215;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=LSA_RS03215;old_locus_tag=LSA_06530
NC_015978.1	Protein Homology	CDS	633121	633417	.	+	0	ID=cds-WP_014081934.1;Parent=gene-LSA_RS03215;Dbxref=Genbank:WP_014081934.1;Name=WP_014081934.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166786.1;locus_tag=LSA_RS03215;product=50S ribosomal protein L27;protein_id=WP_014081934.1;transl_table=11
NC_015978.1	RefSeq	gene	633532	634104	.	+	.	ID=gene-LSA_RS03220;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=LSA_RS03220;old_locus_tag=LSA_06540
NC_015978.1	Protein Homology	CDS	633532	634104	.	+	0	ID=cds-WP_041817717.1;Parent=gene-LSA_RS03220;Dbxref=Genbank:WP_041817717.1;Name=WP_041817717.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166787.1;locus_tag=LSA_RS03220;product=elongation factor P;protein_id=WP_041817717.1;transl_table=11
NC_015978.1	RefSeq	gene	634138	634575	.	+	.	ID=gene-LSA_RS03225;Name=LSA_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03225;old_locus_tag=LSA_06550
NC_015978.1	Protein Homology	CDS	634138	634575	.	+	0	ID=cds-WP_014081936.1;Parent=gene-LSA_RS03225;Dbxref=Genbank:WP_014081936.1;Name=WP_014081936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021536.1;locus_tag=LSA_RS03225;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_014081936.1;transl_table=11
NC_015978.1	RefSeq	gene	634565	634975	.	+	.	ID=gene-LSA_RS03230;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=LSA_RS03230;old_locus_tag=LSA_06560
NC_015978.1	Protein Homology	CDS	634565	634975	.	+	0	ID=cds-WP_014081937.1;Parent=gene-LSA_RS03230;Dbxref=Genbank:WP_014081937.1;Name=WP_014081937.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusB;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021535.1;locus_tag=LSA_RS03230;product=transcription antitermination factor NusB;protein_id=WP_014081937.1;transl_table=11
NC_015978.1	RefSeq	gene	635125	635976	.	+	.	ID=gene-LSA_RS03235;Name=LSA_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03235;old_locus_tag=LSA_06570
NC_015978.1	Protein Homology	CDS	635125	635976	.	+	0	ID=cds-WP_041817719.1;Parent=gene-LSA_RS03235;Dbxref=Genbank:WP_041817719.1;Name=WP_041817719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003560669.1;locus_tag=LSA_RS03235;product=bifunctional 5%2C10-methylene-tetrahydrofolate dehydrogenase/5%2C10-methylene-tetrahydrofolate cyclohydrolase;protein_id=WP_041817719.1;transl_table=11
NC_015978.1	RefSeq	gene	635979	637325	.	+	.	ID=gene-LSA_RS03240;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=LSA_RS03240;old_locus_tag=LSA_06580
NC_015978.1	Protein Homology	CDS	635979	637325	.	+	0	ID=cds-WP_014081939.1;Parent=gene-LSA_RS03240;Dbxref=Genbank:WP_014081939.1;Name=WP_014081939.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020280198.1;locus_tag=LSA_RS03240;product=exodeoxyribonuclease VII large subunit;protein_id=WP_014081939.1;transl_table=11
NC_015978.1	RefSeq	gene	637325	637603	.	+	.	ID=gene-LSA_RS03245;Name=LSA_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03245;old_locus_tag=LSA_06590
NC_015978.1	Protein Homology	CDS	637325	637603	.	+	0	ID=cds-WP_014081940.1;Parent=gene-LSA_RS03245;Dbxref=Genbank:WP_014081940.1;Name=WP_014081940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010619907.1;locus_tag=LSA_RS03245;product=exodeoxyribonuclease VII small subunit;protein_id=WP_014081940.1;transl_table=11
NC_015978.1	RefSeq	gene	637603	638478	.	+	.	ID=gene-LSA_RS03250;Name=LSA_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03250;old_locus_tag=LSA_06600
NC_015978.1	Protein Homology	CDS	637603	638478	.	+	0	ID=cds-WP_041817721.1;Parent=gene-LSA_RS03250;Dbxref=Genbank:WP_041817721.1;Name=WP_041817721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021529.1;locus_tag=LSA_RS03250;product=polyprenyl synthetase family protein;protein_id=WP_041817721.1;transl_table=11
NC_015978.1	RefSeq	gene	638486	639298	.	+	.	ID=gene-LSA_RS03255;Name=LSA_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03255;old_locus_tag=LSA_06610
NC_015978.1	Protein Homology	CDS	638486	639298	.	+	0	ID=cds-WP_041818080.1;Parent=gene-LSA_RS03255;Dbxref=Genbank:WP_041818080.1;Name=WP_041818080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003683820.1;locus_tag=LSA_RS03255;product=TlyA family RNA methyltransferase;protein_id=WP_041818080.1;transl_table=11
NC_015978.1	RefSeq	gene	639313	641010	.	+	.	ID=gene-LSA_RS03260;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=LSA_RS03260;old_locus_tag=LSA_06620
NC_015978.1	Protein Homology	CDS	639313	641010	.	+	0	ID=cds-WP_041817723.1;Parent=gene-LSA_RS03260;Dbxref=Genbank:WP_041817723.1;Name=WP_041817723.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524,GO:0005737;gbkey=CDS;gene=recN;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010619903.1;locus_tag=LSA_RS03260;product=DNA repair protein RecN;protein_id=WP_041817723.1;transl_table=11
NC_015978.1	RefSeq	gene	641098	641715	.	+	.	ID=gene-LSA_RS03265;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=LSA_RS03265;old_locus_tag=LSA_06630
NC_015978.1	Protein Homology	CDS	641098	641715	.	+	0	ID=cds-WP_041817725.1;Parent=gene-LSA_RS03265;Dbxref=Genbank:WP_041817725.1;Name=WP_041817725.1;Ontology_term=GO:0015949,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166796.1;locus_tag=LSA_RS03265;product=guanylate kinase;protein_id=WP_041817725.1;transl_table=11
NC_015978.1	RefSeq	gene	641715	641918	.	+	.	ID=gene-LSA_RS03270;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=LSA_RS03270;old_locus_tag=LSA_06640
NC_015978.1	Protein Homology	CDS	641715	641918	.	+	0	ID=cds-WP_014081945.1;Parent=gene-LSA_RS03270;Dbxref=Genbank:WP_014081945.1;Name=WP_014081945.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoZ;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010622089.1;locus_tag=LSA_RS03270;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_014081945.1;transl_table=11
NC_015978.1	RefSeq	gene	642009	643205	.	+	.	ID=gene-LSA_RS03275;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=LSA_RS03275;old_locus_tag=LSA_06650
NC_015978.1	Protein Homology	CDS	642009	643205	.	+	0	ID=cds-WP_041817727.1;Parent=gene-LSA_RS03275;Dbxref=Genbank:WP_041817727.1;Name=WP_041817727.1;Ontology_term=GO:0015937,GO:0015939,GO:0004632,GO:0004633;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate metabolic process|0015939||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021523.1;locus_tag=LSA_RS03275;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_041817727.1;transl_table=11
NC_015978.1	RefSeq	gene	643220	645625	.	+	.	ID=gene-LSA_RS03280;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=LSA_RS03280;old_locus_tag=LSA_06660
NC_015978.1	Protein Homology	CDS	643220	645625	.	+	0	ID=cds-WP_014081947.1;Parent=gene-LSA_RS03280;Dbxref=Genbank:WP_014081947.1;Name=WP_014081947.1;Ontology_term=GO:0006260,GO:0032508,GO:0003678;gbkey=CDS;gene=priA;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA,DNA duplex unwinding|0032508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021521.1;locus_tag=LSA_RS03280;product=primosomal protein N';protein_id=WP_014081947.1;transl_table=11
NC_015978.1	RefSeq	gene	645640	646584	.	+	.	ID=gene-LSA_RS03285;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=LSA_RS03285;old_locus_tag=LSA_06670
NC_015978.1	Protein Homology	CDS	645640	646584	.	+	0	ID=cds-WP_014081948.1;Parent=gene-LSA_RS03285;Dbxref=Genbank:WP_014081948.1;Name=WP_014081948.1;Ontology_term=GO:0006431,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021520.1;locus_tag=LSA_RS03285;product=methionyl-tRNA formyltransferase;protein_id=WP_014081948.1;transl_table=11
NC_015978.1	RefSeq	gene	646571	647908	.	+	.	ID=gene-LSA_RS03290;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=LSA_RS03290;old_locus_tag=LSA_06680
NC_015978.1	Protein Homology	CDS	646571	647908	.	+	0	ID=cds-WP_041817729.1;Parent=gene-LSA_RS03290;Dbxref=Genbank:WP_041817729.1;Name=WP_041817729.1;Ontology_term=GO:0001510,GO:0006355,GO:0003723,GO:0008168;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,methyltransferase activity|0008168||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011667688.1;locus_tag=LSA_RS03290;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_041817729.1;transl_table=11
NC_015978.1	RefSeq	gene	647917	648825	.	+	.	ID=gene-LSA_RS03295;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=LSA_RS03295;old_locus_tag=LSA_06690
NC_015978.1	Protein Homology	CDS	647917	648825	.	+	0	ID=cds-WP_014081950.1;Parent=gene-LSA_RS03295;Dbxref=Genbank:WP_014081950.1;Name=WP_014081950.1;Ontology_term=GO:0006412,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166802.1;locus_tag=LSA_RS03295;product=ribosome small subunit-dependent GTPase A;protein_id=WP_014081950.1;transl_table=11
NC_015978.1	RefSeq	gene	648818	649477	.	+	.	ID=gene-LSA_RS03300;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=LSA_RS03300;old_locus_tag=LSA_06700
NC_015978.1	Protein Homology	CDS	648818	649477	.	+	0	ID=cds-WP_041817731.1;Parent=gene-LSA_RS03300;Dbxref=Genbank:WP_041817731.1;Name=WP_041817731.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021518.1;locus_tag=LSA_RS03300;product=ribulose-phosphate 3-epimerase;protein_id=WP_041817731.1;transl_table=11
NC_015978.1	RefSeq	gene	649481	650125	.	+	.	ID=gene-LSA_RS03305;Name=LSA_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03305;old_locus_tag=LSA_06710
NC_015978.1	Protein Homology	CDS	649481	650125	.	+	0	ID=cds-WP_014081952.1;Parent=gene-LSA_RS03305;Dbxref=Genbank:WP_014081952.1;Name=WP_014081952.1;Ontology_term=GO:0006772,GO:0004788;gbkey=CDS;go_function=thiamine diphosphokinase activity|0004788||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021516.1;locus_tag=LSA_RS03305;product=thiamine diphosphokinase;protein_id=WP_014081952.1;transl_table=11
NC_015978.1	RefSeq	gene	650204	650389	.	-	.	ID=gene-LSA_RS03310;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=LSA_RS03310;old_locus_tag=LSA_06720
NC_015978.1	Protein Homology	CDS	650204	650389	.	-	0	ID=cds-WP_014081953.1;Parent=gene-LSA_RS03310;Dbxref=Genbank:WP_014081953.1;Name=WP_014081953.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rpmB;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003638622.1;locus_tag=LSA_RS03310;product=50S ribosomal protein L28;protein_id=WP_014081953.1;transl_table=11
NC_015978.1	RefSeq	gene	650590	650952	.	+	.	ID=gene-LSA_RS03315;Name=LSA_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03315;old_locus_tag=LSA_06730
NC_015978.1	Protein Homology	CDS	650590	650952	.	+	0	ID=cds-WP_014081954.1;Parent=gene-LSA_RS03315;Dbxref=Genbank:WP_014081954.1;Name=WP_014081954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003638623.1;locus_tag=LSA_RS03315;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_014081954.1;transl_table=11
NC_015978.1	RefSeq	gene	651024	652682	.	+	.	ID=gene-LSA_RS03320;Name=LSA_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03320;old_locus_tag=LSA_06740
NC_015978.1	Protein Homology	CDS	651024	652682	.	+	0	ID=cds-WP_081462433.1;Parent=gene-LSA_RS03320;Dbxref=Genbank:WP_081462433.1;Name=WP_081462433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005916647.1;locus_tag=LSA_RS03320;product=DAK2 domain-containing protein;protein_id=WP_081462433.1;transl_table=11
NC_015978.1	RefSeq	gene	652745	654775	.	+	.	ID=gene-LSA_RS03325;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=LSA_RS03325;old_locus_tag=LSA_06750
NC_015978.1	Protein Homology	CDS	652745	654775	.	+	0	ID=cds-WP_041817733.1;Parent=gene-LSA_RS03325;Dbxref=Genbank:WP_041817733.1;Name=WP_041817733.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021509.1;locus_tag=LSA_RS03325;product=ATP-dependent DNA helicase RecG;protein_id=WP_041817733.1;transl_table=11
NC_015978.1	RefSeq	gene	654794	655807	.	+	.	ID=gene-LSA_RS03330;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=LSA_RS03330;old_locus_tag=LSA_06760
NC_015978.1	Protein Homology	CDS	654794	655807	.	+	0	ID=cds-WP_041818081.1;Parent=gene-LSA_RS03330;Dbxref=Genbank:WP_041818081.1;Name=WP_041818081.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166629.1;locus_tag=LSA_RS03330;product=phosphate acyltransferase PlsX;protein_id=WP_041818081.1;transl_table=11
NC_015978.1	RefSeq	gene	655892	656602	.	+	.	ID=gene-LSA_RS03335;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=LSA_RS03335;old_locus_tag=LSA_06770
NC_015978.1	Protein Homology	CDS	655892	656602	.	+	0	ID=cds-WP_041817735.1;Parent=gene-LSA_RS03335;Dbxref=Genbank:WP_041817735.1;Name=WP_041817735.1;Ontology_term=GO:0006396,GO:0004525;gbkey=CDS;gene=rnc;go_function=ribonuclease III activity|0004525||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166631.1;locus_tag=LSA_RS03335;product=ribonuclease III;protein_id=WP_041817735.1;transl_table=11
NC_015978.1	RefSeq	gene	656621	660151	.	+	.	ID=gene-LSA_RS03340;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=LSA_RS03340;old_locus_tag=LSA_06780
NC_015978.1	Protein Homology	CDS	656621	660151	.	+	0	ID=cds-WP_014081959.1;Parent=gene-LSA_RS03340;Dbxref=Genbank:WP_014081959.1;Name=WP_014081959.1;Ontology_term=GO:0007059,GO:0030261,GO:0005524;gbkey=CDS;gene=smc;go_function=ATP binding|0005524||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: protein motif:HMM:TIGR02168.1;locus_tag=LSA_RS03340;product=chromosome segregation protein SMC;protein_id=WP_014081959.1;transl_table=11
NC_015978.1	RefSeq	gene	660154	661335	.	+	.	ID=gene-LSA_RS03345;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=LSA_RS03345;old_locus_tag=LSA_06790
NC_015978.1	Protein Homology	CDS	660154	661335	.	+	0	ID=cds-WP_014081960.1;Parent=gene-LSA_RS03345;Dbxref=Genbank:WP_014081960.1;Name=WP_014081960.1;Ontology_term=GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166633.1;locus_tag=LSA_RS03345;product=signal recognition particle-docking protein FtsY;protein_id=WP_014081960.1;transl_table=11
NC_015978.1	RefSeq	gene	661338	661697	.	+	.	ID=gene-LSA_RS03350;Name=LSA_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03350;old_locus_tag=LSA_06800
NC_015978.1	Protein Homology	CDS	661338	661697	.	+	0	ID=cds-WP_014081961.1;Parent=gene-LSA_RS03350;Dbxref=Genbank:WP_014081961.1;Name=WP_014081961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166634.1;locus_tag=LSA_RS03350;product=putative DNA-binding protein;protein_id=WP_014081961.1;transl_table=11
NC_015978.1	RefSeq	gene	661709	663148	.	+	.	ID=gene-LSA_RS03355;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=LSA_RS03355;old_locus_tag=LSA_06810
NC_015978.1	Protein Homology	CDS	661709	663148	.	+	0	ID=cds-WP_014081962.1;Parent=gene-LSA_RS03355;Dbxref=Genbank:WP_014081962.1;Name=WP_014081962.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166635.1;locus_tag=LSA_RS03355;product=signal recognition particle protein;protein_id=WP_014081962.1;transl_table=11
NC_015978.1	RefSeq	gene	663233	663511	.	+	.	ID=gene-LSA_RS03360;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=LSA_RS03360;old_locus_tag=LSA_06820
NC_015978.1	Protein Homology	CDS	663233	663511	.	+	0	ID=cds-WP_014081963.1;Parent=gene-LSA_RS03360;Dbxref=Genbank:WP_014081963.1;Name=WP_014081963.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021500.1;locus_tag=LSA_RS03360;product=30S ribosomal protein S16;protein_id=WP_014081963.1;transl_table=11
NC_015978.1	RefSeq	gene	663520	663765	.	+	.	ID=gene-LSA_RS03365;Name=LSA_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03365;old_locus_tag=LSA_06830
NC_015978.1	Protein Homology	CDS	663520	663765	.	+	0	ID=cds-WP_014081964.1;Parent=gene-LSA_RS03365;Dbxref=Genbank:WP_014081964.1;Name=WP_014081964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166637.1;locus_tag=LSA_RS03365;product=KH domain-containing protein;protein_id=WP_014081964.1;transl_table=11
NC_015978.1	RefSeq	gene	663829	664344	.	+	.	ID=gene-LSA_RS03370;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=LSA_RS03370;old_locus_tag=LSA_06840
NC_015978.1	Protein Homology	CDS	663829	664344	.	+	0	ID=cds-WP_014081965.1;Parent=gene-LSA_RS03370;Dbxref=Genbank:WP_014081965.1;Name=WP_014081965.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0003723;gbkey=CDS;gene=rimM;go_function=RNA binding|0003723||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015473657.1;locus_tag=LSA_RS03370;product=ribosome maturation factor RimM;protein_id=WP_014081965.1;transl_table=11
NC_015978.1	RefSeq	gene	664346	665110	.	+	.	ID=gene-LSA_RS03375;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=LSA_RS03375;old_locus_tag=LSA_06850
NC_015978.1	Protein Homology	CDS	664346	665110	.	+	0	ID=cds-WP_014081966.1;Parent=gene-LSA_RS03375;Dbxref=Genbank:WP_014081966.1;Name=WP_014081966.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N(1))-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011667665.1;locus_tag=LSA_RS03375;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_014081966.1;transl_table=11
NC_015978.1	RefSeq	gene	665209	665568	.	+	.	ID=gene-LSA_RS03380;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=LSA_RS03380;old_locus_tag=LSA_06860
NC_015978.1	Protein Homology	CDS	665209	665568	.	+	0	ID=cds-WP_014081967.1;Parent=gene-LSA_RS03380;Dbxref=Genbank:WP_014081967.1;Name=WP_014081967.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014081967.1;locus_tag=LSA_RS03380;product=50S ribosomal protein L19;protein_id=WP_014081967.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	665614	667129	.	-	.	ID=gene-LSA_RS03385;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=pseudogene;locus_tag=LSA_RS03385;pseudo=true
NC_015978.1	Protein Homology	CDS	665614	667129	.	-	0	ID=cds-LSA_RS03385;Parent=gene-LSA_RS03385;Note=frameshifted%3B internal stop;Ontology_term=GO:0022857;gbkey=CDS;gene=yjeM;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166480.1;locus_tag=LSA_RS03385;product=glutamate/gamma-aminobutyrate family transporter YjeM;pseudo=true;transl_table=11
NC_015978.1	RefSeq	gene	667146	668570	.	-	.	ID=gene-LSA_RS03390;Name=LSA_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03390;old_locus_tag=LSA_06910
NC_015978.1	Protein Homology	CDS	667146	668570	.	-	0	ID=cds-WP_041817738.1;Parent=gene-LSA_RS03390;Dbxref=Genbank:WP_041817738.1;Name=WP_041817738.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021492.1;locus_tag=LSA_RS03390;product=C69 family dipeptidase;protein_id=WP_041817738.1;transl_table=11
NC_015978.1	RefSeq	gene	668736	668912	.	-	.	ID=gene-LSA_RS07895;Name=LSA_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07895;old_locus_tag=LSA_06920
NC_015978.1	Protein Homology	CDS	668736	668912	.	-	0	ID=cds-WP_238331737.1;Parent=gene-LSA_RS07895;Dbxref=Genbank:WP_238331737.1;Name=WP_238331737.1;Ontology_term=GO:0006631,GO:0016491,GO:0016616;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: protein motif:HMM:NF012928.2;locus_tag=LSA_RS07895;product=3-hydroxyacyl-CoA dehydrogenase family protein;protein_id=WP_238331737.1;transl_table=11
NC_015978.1	RefSeq	gene	668909	669553	.	-	.	ID=gene-LSA_RS03395;Name=LSA_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03395;old_locus_tag=LSA_06930
NC_015978.1	Protein Homology	CDS	668909	669553	.	-	0	ID=cds-WP_238331738.1;Parent=gene-LSA_RS03395;Dbxref=Genbank:WP_238331738.1;Name=WP_238331738.1;Ontology_term=GO:0006631,GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: protein motif:HMM:NF014757.2;locus_tag=LSA_RS03395;product=3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein;protein_id=WP_238331738.1;transl_table=11
NC_015978.1	RefSeq	gene	669802	671304	.	+	.	ID=gene-LSA_RS03400;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=LSA_RS03400;old_locus_tag=LSA_06940
NC_015978.1	Protein Homology	CDS	669802	671304	.	+	0	ID=cds-WP_014081970.1;Parent=gene-LSA_RS03400;Dbxref=Genbank:WP_014081970.1;Name=WP_014081970.1;Ontology_term=GO:0006071,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011667623.1;locus_tag=LSA_RS03400;product=glycerol kinase GlpK;protein_id=WP_014081970.1;transl_table=11
NC_015978.1	RefSeq	gene	671305	672645	.	+	.	ID=gene-LSA_RS03405;Name=LSA_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03405;old_locus_tag=LSA_06950
NC_015978.1	Protein Homology	CDS	671305	672645	.	+	0	ID=cds-WP_014081971.1;Parent=gene-LSA_RS03405;Dbxref=Genbank:WP_014081971.1;Name=WP_014081971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003700396.1;locus_tag=LSA_RS03405;product=RsmB/NOP family class I SAM-dependent RNA methyltransferase;protein_id=WP_014081971.1;transl_table=11
NC_015978.1	RefSeq	gene	672673	673704	.	-	.	ID=gene-LSA_RS03410;Name=fni;gbkey=Gene;gene=fni;gene_biotype=protein_coding;locus_tag=LSA_RS03410;old_locus_tag=LSA_06960
NC_015978.1	Protein Homology	CDS	672673	673704	.	-	0	ID=cds-WP_014081972.1;Parent=gene-LSA_RS03410;Dbxref=Genbank:WP_014081972.1;Name=WP_014081972.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=fni;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166484.1;locus_tag=LSA_RS03410;product=type 2 isopentenyl-diphosphate Delta-isomerase;protein_id=WP_014081972.1;transl_table=11
NC_015978.1	RefSeq	gene	673715	674782	.	-	.	ID=gene-LSA_RS03415;Name=LSA_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03415;old_locus_tag=LSA_06970
NC_015978.1	Protein Homology	CDS	673715	674782	.	-	0	ID=cds-WP_041817740.1;Parent=gene-LSA_RS03415;Dbxref=Genbank:WP_041817740.1;Name=WP_041817740.1;Ontology_term=GO:0016126,GO:0019287,GO:0004631;gbkey=CDS;go_function=phosphomevalonate kinase activity|0004631||IEA;go_process=sterol biosynthetic process|0016126||IEA,isopentenyl diphosphate biosynthetic process%2C mevalonate pathway|0019287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166485.1;locus_tag=LSA_RS03415;product=phosphomevalonate kinase;protein_id=WP_041817740.1;transl_table=11
NC_015978.1	RefSeq	gene	674810	675793	.	-	.	ID=gene-LSA_RS03420;Name=mvaD;gbkey=Gene;gene=mvaD;gene_biotype=protein_coding;locus_tag=LSA_RS03420;old_locus_tag=LSA_06980
NC_015978.1	Protein Homology	CDS	674810	675793	.	-	0	ID=cds-WP_014081974.1;Parent=gene-LSA_RS03420;Dbxref=Genbank:WP_014081974.1;Name=WP_014081974.1;Ontology_term=GO:0019287,GO:0004163;gbkey=CDS;gene=mvaD;go_function=diphosphomevalonate decarboxylase activity|0004163||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C mevalonate pathway|0019287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004047821.1;locus_tag=LSA_RS03420;product=diphosphomevalonate decarboxylase;protein_id=WP_014081974.1;transl_table=11
NC_015978.1	RefSeq	gene	675790	676743	.	-	.	ID=gene-LSA_RS03425;Name=mvk;gbkey=Gene;gene=mvk;gene_biotype=protein_coding;locus_tag=LSA_RS03425;old_locus_tag=LSA_06990
NC_015978.1	Protein Homology	CDS	675790	676743	.	-	0	ID=cds-WP_014081975.1;Parent=gene-LSA_RS03425;Dbxref=Genbank:WP_014081975.1;Name=WP_014081975.1;Ontology_term=GO:0016126,GO:0019287,GO:0004496;gbkey=CDS;gene=mvk;go_function=mevalonate kinase activity|0004496||IEA;go_process=sterol biosynthetic process|0016126||IEA,isopentenyl diphosphate biosynthetic process%2C mevalonate pathway|0019287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021484.1;locus_tag=LSA_RS03425;product=mevalonate kinase;protein_id=WP_014081975.1;transl_table=11
NC_015978.1	RefSeq	gene	676885	679698	.	+	.	ID=gene-LSA_RS03430;Name=LSA_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03430;old_locus_tag=LSA_07000
NC_015978.1	Protein Homology	CDS	676885	679698	.	+	0	ID=cds-WP_041817742.1;Parent=gene-LSA_RS03430;Dbxref=Genbank:WP_041817742.1;Name=WP_041817742.1;Ontology_term=GO:0004527;gbkey=CDS;go_function=exonuclease activity|0004527||IEA;inference=COORDINATES: protein motif:HMM:TIGR01407.1;locus_tag=LSA_RS03430;product=exonuclease domain-containing protein;protein_id=WP_041817742.1;transl_table=11
NC_015978.1	RefSeq	gene	679732	680229	.	+	.	ID=gene-LSA_RS03435;Name=LSA_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03435;old_locus_tag=LSA_07010
NC_015978.1	Protein Homology	CDS	679732	680229	.	+	0	ID=cds-WP_014081977.1;Parent=gene-LSA_RS03435;Dbxref=Genbank:WP_014081977.1;Name=WP_014081977.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015378.2;locus_tag=LSA_RS03435;product=DUF5590 domain-containing protein;protein_id=WP_014081977.1;transl_table=11
NC_015978.1	RefSeq	gene	680241	680948	.	+	.	ID=gene-LSA_RS03440;Name=LSA_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03440;old_locus_tag=LSA_07020
NC_015978.1	Protein Homology	CDS	680241	680948	.	+	0	ID=cds-WP_014081978.1;Parent=gene-LSA_RS03440;Dbxref=Genbank:WP_014081978.1;Name=WP_014081978.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01446.1;locus_tag=LSA_RS03440;product=DnaD domain protein;protein_id=WP_014081978.1;transl_table=11
NC_015978.1	RefSeq	gene	681045	682010	.	+	.	ID=gene-LSA_RS03445;Name=LSA_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03445;old_locus_tag=LSA_07030
NC_015978.1	Protein Homology	CDS	681045	682010	.	+	0	ID=cds-WP_014081979.1;Parent=gene-LSA_RS03445;Dbxref=Genbank:WP_014081979.1;Name=WP_014081979.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012568.2;locus_tag=LSA_RS03445;product=polyprenyl synthetase family protein;protein_id=WP_014081979.1;transl_table=11
NC_015978.1	RefSeq	gene	682011	683756	.	-	.	ID=gene-LSA_RS03450;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=LSA_RS03450;old_locus_tag=LSA_07040
NC_015978.1	Protein Homology	CDS	682011	683756	.	-	0	ID=cds-WP_041817744.1;Parent=gene-LSA_RS03450;Dbxref=Genbank:WP_041817744.1;Name=WP_041817744.1;Ontology_term=GO:0033228,GO:0005524,GO:0033230,GO:0005887,GO:0055051;gbkey=CDS;gene=cydC;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C integrated substrate binding|0055051||IEA;go_function=ATP binding|0005524||IEA,ABC-type cysteine transporter activity|0033230||IEA;go_process=cysteine export across plasma membrane|0033228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010625492.1;locus_tag=LSA_RS03450;product=thiol reductant ABC exporter subunit CydC;protein_id=WP_041817744.1;transl_table=11
NC_015978.1	RefSeq	gene	683749	685491	.	-	.	ID=gene-LSA_RS03455;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=LSA_RS03455;old_locus_tag=LSA_07050
NC_015978.1	Protein Homology	CDS	683749	685491	.	-	0	ID=cds-WP_014081981.1;Parent=gene-LSA_RS03455;Dbxref=Genbank:WP_014081981.1;Name=WP_014081981.1;Ontology_term=GO:0033228,GO:0005524,GO:0033230,GO:0005887,GO:0055051;gbkey=CDS;gene=cydD;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C integrated substrate binding|0055051||IEA;go_function=ATP binding|0005524||IEA,ABC-type cysteine transporter activity|0033230||IEA;go_process=cysteine export across plasma membrane|0033228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022319.1;locus_tag=LSA_RS03455;product=thiol reductant ABC exporter subunit CydD;protein_id=WP_014081981.1;transl_table=11
NC_015978.1	RefSeq	gene	685511	686545	.	-	.	ID=gene-LSA_RS03460;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=LSA_RS03460;old_locus_tag=LSA_07060
NC_015978.1	Protein Homology	CDS	685511	686545	.	-	0	ID=cds-WP_014081982.1;Parent=gene-LSA_RS03460;Dbxref=Genbank:WP_014081982.1;Name=WP_014081982.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022321.1;locus_tag=LSA_RS03460;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_014081982.1;transl_table=11
NC_015978.1	RefSeq	gene	686542	687981	.	-	.	ID=gene-LSA_RS03465;Name=LSA_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03465;old_locus_tag=LSA_07070
NC_015978.1	Protein Homology	CDS	686542	687981	.	-	0	ID=cds-WP_014081983.1;Parent=gene-LSA_RS03465;Dbxref=Genbank:WP_014081983.1;Name=WP_014081983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022322.1;locus_tag=LSA_RS03465;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_014081983.1;transl_table=11
NC_015978.1	RefSeq	gene	688007	689182	.	-	.	ID=gene-LSA_RS03470;Name=LSA_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03470;old_locus_tag=LSA_07080
NC_015978.1	Protein Homology	CDS	688007	689182	.	-	0	ID=cds-WP_041817746.1;Parent=gene-LSA_RS03470;Dbxref=Genbank:WP_041817746.1;Name=WP_041817746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022323.1;locus_tag=LSA_RS03470;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_041817746.1;transl_table=11
NC_015978.1	RefSeq	gene	689353	690365	.	+	.	ID=gene-LSA_RS03480;Name=LSA_RS03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03480;old_locus_tag=LSA_07100
NC_015978.1	Protein Homology	CDS	689353	689548	.	+	0	ID=cds-WP_144011135.1;Parent=gene-LSA_RS03480;Dbxref=Genbank:WP_144011135.1;Name=WP_144011135.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558186.1;locus_tag=LSA_RS03480;product=IS3 family transposase;protein_id=WP_144011135.1;transl_table=11
NC_015978.1	Protein Homology	CDS	689548	690365	.	+	2	ID=cds-WP_144011135.1;Parent=gene-LSA_RS03480;Dbxref=Genbank:WP_144011135.1;Name=WP_144011135.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558186.1;locus_tag=LSA_RS03480;product=IS3 family transposase;protein_id=WP_144011135.1;transl_table=11
NC_015978.1	RefSeq	gene	690460	691371	.	+	.	ID=gene-LSA_RS03485;Name=LSA_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03485;old_locus_tag=LSA_07110
NC_015978.1	Protein Homology	CDS	690460	691371	.	+	0	ID=cds-WP_041817750.1;Parent=gene-LSA_RS03485;Dbxref=Genbank:WP_041817750.1;Name=WP_041817750.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013226.2;locus_tag=LSA_RS03485;product=prenyltransferase;protein_id=WP_041817750.1;transl_table=11
NC_015978.1	RefSeq	gene	691410	693725	.	-	.	ID=gene-LSA_RS03490;Name=LSA_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03490;old_locus_tag=LSA_07120
NC_015978.1	Protein Homology	CDS	691410	693725	.	-	0	ID=cds-WP_014081988.1;Parent=gene-LSA_RS03490;Dbxref=Genbank:WP_014081988.1;Name=WP_014081988.1;Ontology_term=GO:0008658;gbkey=CDS;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166491.1;locus_tag=LSA_RS03490;product=PBP1A family penicillin-binding protein;protein_id=WP_014081988.1;transl_table=11
NC_015978.1	RefSeq	gene	693737	694339	.	-	.	ID=gene-LSA_RS03495;Name=recU;gbkey=Gene;gene=recU;gene_biotype=protein_coding;locus_tag=LSA_RS03495;old_locus_tag=LSA_07130
NC_015978.1	Protein Homology	CDS	693737	694339	.	-	0	ID=cds-WP_041817751.1;Parent=gene-LSA_RS03495;Dbxref=Genbank:WP_041817751.1;Name=WP_041817751.1;Ontology_term=GO:0006281,GO:0003676,GO:0004518;gbkey=CDS;gene=recU;go_function=nucleic acid binding|0003676||IEA,nuclease activity|0004518||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003638749.1;locus_tag=LSA_RS03495;product=Holliday junction resolvase RecU;protein_id=WP_041817751.1;transl_table=11
NC_015978.1	RefSeq	gene	694465	695034	.	+	.	ID=gene-LSA_RS03500;Name=LSA_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03500;old_locus_tag=LSA_07140
NC_015978.1	Protein Homology	CDS	694465	695034	.	+	0	ID=cds-WP_041817754.1;Parent=gene-LSA_RS03500;Dbxref=Genbank:WP_041817754.1;Name=WP_041817754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011679459.1;locus_tag=LSA_RS03500;product=DUF1273 domain-containing protein;protein_id=WP_041817754.1;transl_table=11
NC_015978.1	RefSeq	gene	695099	695491	.	+	.	ID=gene-LSA_RS03505;Name=gpsB;gbkey=Gene;gene=gpsB;gene_biotype=protein_coding;locus_tag=LSA_RS03505;old_locus_tag=LSA_07150
NC_015978.1	Protein Homology	CDS	695099	695491	.	+	0	ID=cds-WP_041817756.1;Parent=gene-LSA_RS03505;Dbxref=Genbank:WP_041817756.1;Name=WP_041817756.1;gbkey=CDS;gene=gpsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014939966.1;locus_tag=LSA_RS03505;product=cell division regulator GpsB;protein_id=WP_041817756.1;transl_table=11
NC_015978.1	RefSeq	gene	695506	695887	.	+	.	ID=gene-LSA_RS07445;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=LSA_RS07445
NC_015978.1	cmsearch	RNase_P_RNA	695506	695887	.	+	.	ID=rna-LSA_RS07445;Parent=gene-LSA_RS07445;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS07445;product=RNase P RNA component class B
NC_015978.1	cmsearch	exon	695506	695887	.	+	.	ID=exon-LSA_RS07445-1;Parent=rna-LSA_RS07445;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS07445;product=RNase P RNA component class B
NC_015978.1	RefSeq	gene	695954	697090	.	+	.	ID=gene-LSA_RS03510;Name=LSA_RS03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03510;old_locus_tag=LSA_07160
NC_015978.1	Protein Homology	CDS	695954	697090	.	+	0	ID=cds-WP_014081992.1;Parent=gene-LSA_RS03510;Dbxref=Genbank:WP_014081992.1;Name=WP_014081992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008214657.1;locus_tag=LSA_RS03510;product=class I SAM-dependent RNA methyltransferase;protein_id=WP_014081992.1;transl_table=11
NC_015978.1	RefSeq	gene	697117	698226	.	+	.	ID=gene-LSA_RS03515;Name=LSA_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03515;old_locus_tag=LSA_07170
NC_015978.1	Protein Homology	CDS	697117	698226	.	+	0	ID=cds-WP_014081993.1;Parent=gene-LSA_RS03515;Dbxref=Genbank:WP_014081993.1;Name=WP_014081993.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013434.2;locus_tag=LSA_RS03515;product=FAD-binding oxidoreductase;protein_id=WP_014081993.1;transl_table=11
NC_015978.1	RefSeq	gene	698219	698623	.	-	.	ID=gene-LSA_RS03520;Name=LSA_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03520;old_locus_tag=LSA_07180
NC_015978.1	Protein Homology	CDS	698219	698623	.	-	0	ID=cds-WP_014081994.1;Parent=gene-LSA_RS03520;Dbxref=Genbank:WP_014081994.1;Name=WP_014081994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008856785.1;locus_tag=LSA_RS03520;product=ribonuclease HI family protein;protein_id=WP_014081994.1;transl_table=11
NC_015978.1	RefSeq	gene	698654	699046	.	+	.	ID=gene-LSA_RS03525;Name=LSA_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03525;old_locus_tag=LSA_07190
NC_015978.1	Protein Homology	CDS	698654	699046	.	+	0	ID=cds-WP_014081995.1;Parent=gene-LSA_RS03525;Dbxref=Genbank:WP_014081995.1;Name=WP_014081995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021467.1;locus_tag=LSA_RS03525;product=hypothetical protein;protein_id=WP_014081995.1;transl_table=11
NC_015978.1	RefSeq	gene	699048	699503	.	+	.	ID=gene-LSA_RS03530;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=LSA_RS03530;old_locus_tag=LSA_07200
NC_015978.1	Protein Homology	CDS	699048	699503	.	+	0	ID=cds-WP_014081996.1;Parent=gene-LSA_RS03530;Dbxref=Genbank:WP_014081996.1;Name=WP_014081996.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005887;gbkey=CDS;gene=lspA;go_component=integral component of plasma membrane|0005887||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016182721.1;locus_tag=LSA_RS03530;product=signal peptidase II;protein_id=WP_014081996.1;transl_table=11
NC_015978.1	RefSeq	gene	699531	700427	.	+	.	ID=gene-LSA_RS03535;Name=LSA_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03535;old_locus_tag=LSA_07210
NC_015978.1	Protein Homology	CDS	699531	700427	.	+	0	ID=cds-WP_103423566.1;Parent=gene-LSA_RS03535;Dbxref=Genbank:WP_103423566.1;Name=WP_103423566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021462.1;locus_tag=LSA_RS03535;product=RluA family pseudouridine synthase;protein_id=WP_103423566.1;transl_table=11
NC_015978.1	RefSeq	gene	700433	700966	.	+	.	ID=gene-LSA_RS03540;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=LSA_RS03540;old_locus_tag=LSA_07220
NC_015978.1	Protein Homology	CDS	700433	700966	.	+	0	ID=cds-WP_041817758.1;Parent=gene-LSA_RS03540;Dbxref=Genbank:WP_041817758.1;Name=WP_041817758.1;gbkey=CDS;gene=pyrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001156491.1;locus_tag=LSA_RS03540;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;protein_id=WP_041817758.1;transl_table=11
NC_015978.1	RefSeq	gene	700998	702083	.	+	.	ID=gene-LSA_RS03545;Name=LSA_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03545;old_locus_tag=LSA_07230
NC_015978.1	Protein Homology	CDS	700998	702083	.	+	0	ID=cds-WP_041818085.1;Parent=gene-LSA_RS03545;Dbxref=Genbank:WP_041818085.1;Name=WP_041818085.1;Ontology_term=GO:0006541,GO:0004088;gbkey=CDS;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021458.1;locus_tag=LSA_RS03545;product=carbamoyl phosphate synthase small subunit;protein_id=WP_041818085.1;transl_table=11
NC_015978.1	RefSeq	gene	702076	704604	.	+	.	ID=gene-LSA_RS03550;Name=LSA_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03550;old_locus_tag=LSA_07240
NC_015978.1	Protein Homology	CDS	702076	704604	.	+	0	ID=cds-WP_081462406.1;Parent=gene-LSA_RS03550;Dbxref=Genbank:WP_081462406.1;Name=WP_081462406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166504.1;locus_tag=LSA_RS03550;product=ATP-grasp domain-containing protein;protein_id=WP_081462406.1;transl_table=11
NC_015978.1	RefSeq	gene	704633	706342	.	-	.	ID=gene-LSA_RS03555;Name=LSA_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03555;old_locus_tag=LSA_07250
NC_015978.1	Protein Homology	CDS	704633	706342	.	-	0	ID=cds-WP_041817760.1;Parent=gene-LSA_RS03555;Dbxref=Genbank:WP_041817760.1;Name=WP_041817760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020089298.1;locus_tag=LSA_RS03555;product=fibronectin-binding domain-containing protein;protein_id=WP_041817760.1;transl_table=11
NC_015978.1	RefSeq	gene	706469	706888	.	+	.	ID=gene-LSA_RS03560;Name=LSA_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03560;old_locus_tag=LSA_07260
NC_015978.1	Protein Homology	CDS	706469	706888	.	+	0	ID=cds-WP_014082002.1;Parent=gene-LSA_RS03560;Dbxref=Genbank:WP_014082002.1;Name=WP_014082002.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021456.1;locus_tag=LSA_RS03560;product=MarR family transcriptional regulator;protein_id=WP_014082002.1;transl_table=11
NC_015978.1	RefSeq	gene	706905	707780	.	+	.	ID=gene-LSA_RS03565;Name=LSA_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03565;old_locus_tag=LSA_07270
NC_015978.1	Protein Homology	CDS	706905	707780	.	+	0	ID=cds-WP_014082003.1;Parent=gene-LSA_RS03565;Dbxref=Genbank:WP_014082003.1;Name=WP_014082003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014939974.1;locus_tag=LSA_RS03565;product=DegV family protein;protein_id=WP_014082003.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	708004	708954	.	-	.	ID=gene-LSA_RS03570;Name=LSA_RS03570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS03570;pseudo=true
NC_015978.1	Protein Homology	CDS	708004	708954	.	-	0	ID=cds-LSA_RS03570;Parent=gene-LSA_RS03570;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166290.1;locus_tag=LSA_RS03570;product=Dyp-type peroxidase;pseudo=true;transl_table=11
NC_015978.1	RefSeq	gene	709063	709530	.	+	.	ID=gene-LSA_RS03575;Name=LSA_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03575;old_locus_tag=LSA_07300
NC_015978.1	Protein Homology	CDS	709063	709530	.	+	0	ID=cds-WP_014082004.1;Parent=gene-LSA_RS03575;Dbxref=Genbank:WP_014082004.1;Name=WP_014082004.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013412.2;locus_tag=LSA_RS03575;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_014082004.1;transl_table=11
NC_015978.1	RefSeq	gene	709481	709690	.	+	.	ID=gene-LSA_RS07625;Name=LSA_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07625
NC_015978.1	GeneMarkS-2+	CDS	709481	709690	.	+	0	ID=cds-WP_144011136.1;Parent=gene-LSA_RS07625;Dbxref=Genbank:WP_144011136.1;Name=WP_144011136.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS07625;product=hypothetical protein;protein_id=WP_144011136.1;transl_table=11
NC_015978.1	RefSeq	gene	709743	710051	.	-	.	ID=gene-LSA_RS03580;Name=LSA_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03580;old_locus_tag=LSA_07310
NC_015978.1	GeneMarkS-2+	CDS	709743	710051	.	-	0	ID=cds-WP_014082005.1;Parent=gene-LSA_RS03580;Dbxref=Genbank:WP_014082005.1;Name=WP_014082005.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS03580;product=hypothetical protein;protein_id=WP_014082005.1;transl_table=11
NC_015978.1	RefSeq	gene	710064	710789	.	-	.	ID=gene-LSA_RS03585;Name=LSA_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03585;old_locus_tag=LSA_07320
NC_015978.1	GeneMarkS-2+	CDS	710064	710789	.	-	0	ID=cds-WP_014082006.1;Parent=gene-LSA_RS03585;Dbxref=Genbank:WP_014082006.1;Name=WP_014082006.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS03585;product=hypothetical protein;protein_id=WP_014082006.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	710789	711676	.	-	.	ID=gene-LSA_RS03590;Name=LSA_RS03590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS03590;pseudo=true
NC_015978.1	Protein Homology	CDS	710789	711676	.	-	0	ID=cds-LSA_RS03590;Parent=gene-LSA_RS03590;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010015583.1;locus_tag=LSA_RS03590;product=XRE family transcriptional regulator;pseudo=true;transl_table=11
NC_015978.1	RefSeq	gene	711839	712369	.	-	.	ID=gene-LSA_RS03595;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=LSA_RS03595;old_locus_tag=LSA_07350
NC_015978.1	Protein Homology	CDS	711839	712369	.	-	0	ID=cds-WP_014082007.1;Parent=gene-LSA_RS03595;Dbxref=Genbank:WP_014082007.1;Name=WP_014082007.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003717045.1;locus_tag=LSA_RS03595;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_014082007.1;transl_table=11
NC_015978.1	RefSeq	gene	712381	712818	.	-	.	ID=gene-LSA_RS03600;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=LSA_RS03600;old_locus_tag=LSA_07360
NC_015978.1	Protein Homology	CDS	712381	712818	.	-	0	ID=cds-WP_014082008.1;Parent=gene-LSA_RS03600;Dbxref=Genbank:WP_014082008.1;Name=WP_014082008.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010763529.1;locus_tag=LSA_RS03600;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_014082008.1;transl_table=11
NC_015978.1	RefSeq	gene	712981	713922	.	-	.	ID=gene-LSA_RS03605;Name=LSA_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03605;old_locus_tag=LSA_07370
NC_015978.1	Protein Homology	CDS	712981	713922	.	-	0	ID=cds-WP_014082009.1;Parent=gene-LSA_RS03605;Dbxref=Genbank:WP_014082009.1;Name=WP_014082009.1;Ontology_term=GO:0004427;gbkey=CDS;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416849.1;locus_tag=LSA_RS03605;product=manganese-dependent inorganic pyrophosphatase;protein_id=WP_014082009.1;transl_table=11
NC_015978.1	RefSeq	gene	714002	716467	.	-	.	ID=gene-LSA_RS03610;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=LSA_RS03610;old_locus_tag=LSA_07380
NC_015978.1	Protein Homology	CDS	714002	716467	.	-	0	ID=cds-WP_014082010.1;Parent=gene-LSA_RS03610;Dbxref=Genbank:WP_014082010.1;Name=WP_014082010.1;Ontology_term=GO:0006260,GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021442.1;locus_tag=LSA_RS03610;product=DNA topoisomerase IV subunit A;protein_id=WP_014082010.1;transl_table=11
NC_015978.1	RefSeq	gene	716483	718441	.	-	.	ID=gene-LSA_RS03615;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=LSA_RS03615;old_locus_tag=LSA_07390
NC_015978.1	Protein Homology	CDS	716483	718441	.	-	0	ID=cds-WP_041817762.1;Parent=gene-LSA_RS03615;Dbxref=Genbank:WP_041817762.1;Name=WP_041817762.1;Ontology_term=GO:0006260,GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parE;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010619809.1;locus_tag=LSA_RS03615;product=DNA topoisomerase IV subunit B;protein_id=WP_041817762.1;transl_table=11
NC_015978.1	RefSeq	gene	718599	719228	.	+	.	ID=gene-LSA_RS03620;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=LSA_RS03620;old_locus_tag=LSA_07400
NC_015978.1	Protein Homology	CDS	718599	719228	.	+	0	ID=cds-WP_041817764.1;Parent=gene-LSA_RS03620;Dbxref=Genbank:WP_041817764.1;Name=WP_041817764.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021439.1;locus_tag=LSA_RS03620;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_041817764.1;transl_table=11
NC_015978.1	RefSeq	gene	719263	720147	.	-	.	ID=gene-LSA_RS03625;Name=LSA_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03625;old_locus_tag=LSA_07410
NC_015978.1	Protein Homology	CDS	719263	720147	.	-	0	ID=cds-WP_049777605.1;Parent=gene-LSA_RS03625;Dbxref=Genbank:WP_049777605.1;Name=WP_049777605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166276.1;locus_tag=LSA_RS03625;product=aldose 1-epimerase family protein;protein_id=WP_049777605.1;transl_table=11
NC_015978.1	RefSeq	gene	720238	721170	.	-	.	ID=gene-LSA_RS03630;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=LSA_RS03630;old_locus_tag=LSA_07420
NC_015978.1	Protein Homology	CDS	720238	721170	.	-	0	ID=cds-WP_014082014.1;Parent=gene-LSA_RS03630;Dbxref=Genbank:WP_014082014.1;Name=WP_014082014.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerC;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021435.1;locus_tag=LSA_RS03630;product=tyrosine recombinase XerC;protein_id=WP_014082014.1;transl_table=11
NC_015978.1	RefSeq	gene	721223	723346	.	-	.	ID=gene-LSA_RS03635;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=LSA_RS03635;old_locus_tag=LSA_07430
NC_015978.1	Protein Homology	CDS	721223	723346	.	-	0	ID=cds-WP_041817766.1;Parent=gene-LSA_RS03635;Dbxref=Genbank:WP_041817766.1;Name=WP_041817766.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003640563.1;locus_tag=LSA_RS03635;product=type I DNA topoisomerase;protein_id=WP_041817766.1;transl_table=11
NC_015978.1	RefSeq	gene	723435	724028	.	-	.	ID=gene-LSA_RS03640;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=LSA_RS03640;old_locus_tag=LSA_07440
NC_015978.1	Protein Homology	CDS	723435	724028	.	-	0	ID=cds-WP_238331741.1;Parent=gene-LSA_RS03640;Dbxref=Genbank:WP_238331741.1;Name=WP_238331741.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: protein motif:HMM:TIGR00732.1;locus_tag=LSA_RS03640;product=DNA-processing protein DprA;protein_id=WP_238331741.1;transl_table=11
NC_015978.1	RefSeq	gene	724034	724309	.	-	.	ID=gene-LSA_RS03645;Name=LSA_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03645;old_locus_tag=LSA_07450
NC_015978.1	GeneMarkS-2+	CDS	724034	724309	.	-	0	ID=cds-WP_014082016.1;Parent=gene-LSA_RS03645;Dbxref=Genbank:WP_014082016.1;Name=WP_014082016.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS03645;product=hypothetical protein;protein_id=WP_014082016.1;transl_table=11
NC_015978.1	RefSeq	gene	724351	725115	.	-	.	ID=gene-LSA_RS03650;Name=LSA_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03650;old_locus_tag=LSA_07460
NC_015978.1	Protein Homology	CDS	724351	725115	.	-	0	ID=cds-WP_014082017.1;Parent=gene-LSA_RS03650;Dbxref=Genbank:WP_014082017.1;Name=WP_014082017.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014939947.1;locus_tag=LSA_RS03650;product=ribonuclease HII;protein_id=WP_014082017.1;transl_table=11
NC_015978.1	RefSeq	gene	725118	725981	.	-	.	ID=gene-LSA_RS03655;Name=ylqF;gbkey=Gene;gene=ylqF;gene_biotype=protein_coding;locus_tag=LSA_RS03655;old_locus_tag=LSA_07470
NC_015978.1	Protein Homology	CDS	725118	725981	.	-	0	ID=cds-WP_014082018.1;Parent=gene-LSA_RS03655;Dbxref=Genbank:WP_014082018.1;Name=WP_014082018.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=ylqF;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013727867.1;locus_tag=LSA_RS03655;product=ribosome biogenesis GTPase YlqF;protein_id=WP_014082018.1;transl_table=11
NC_015978.1	RefSeq	gene	725992	726213	.	-	.	ID=gene-LSA_RS03660;Name=LSA_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03660;old_locus_tag=LSA_07480
NC_015978.1	Protein Homology	CDS	725992	726213	.	-	0	ID=cds-WP_014082019.1;Parent=gene-LSA_RS03660;Dbxref=Genbank:WP_014082019.1;Name=WP_014082019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019251611.1;locus_tag=LSA_RS03660;product=YozE family protein;protein_id=WP_014082019.1;transl_table=11
NC_015978.1	RefSeq	gene	726226	726717	.	-	.	ID=gene-LSA_RS03665;Name=LSA_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03665;old_locus_tag=LSA_07490
NC_015978.1	Protein Homology	CDS	726226	726717	.	-	0	ID=cds-WP_014082020.1;Parent=gene-LSA_RS03665;Dbxref=Genbank:WP_014082020.1;Name=WP_014082020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021426.1;locus_tag=LSA_RS03665;product=dihydrofolate reductase;protein_id=WP_014082020.1;transl_table=11
NC_015978.1	RefSeq	gene	726730	727680	.	-	.	ID=gene-LSA_RS03670;Name=LSA_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03670;old_locus_tag=LSA_07500
NC_015978.1	Protein Homology	CDS	726730	727680	.	-	0	ID=cds-WP_014082021.1;Parent=gene-LSA_RS03670;Dbxref=Genbank:WP_014082021.1;Name=WP_014082021.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021425.1;locus_tag=LSA_RS03670;product=thymidylate synthase;protein_id=WP_014082021.1;transl_table=11
NC_015978.1	RefSeq	gene	727700	729595	.	-	.	ID=gene-LSA_RS03675;Name=LSA_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03675;old_locus_tag=LSA_07510
NC_015978.1	Protein Homology	CDS	727700	729595	.	-	0	ID=cds-WP_041817768.1;Parent=gene-LSA_RS03675;Dbxref=Genbank:WP_041817768.1;Name=WP_041817768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011475878.1;locus_tag=LSA_RS03675;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_041817768.1;transl_table=11
NC_015978.1	RefSeq	gene	729603	730814	.	-	.	ID=gene-LSA_RS03680;Name=LSA_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03680;old_locus_tag=LSA_07520
NC_015978.1	Protein Homology	CDS	729603	730814	.	-	0	ID=cds-WP_041817770.1;Parent=gene-LSA_RS03680;Dbxref=Genbank:WP_041817770.1;Name=WP_041817770.1;Ontology_term=GO:0001680,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021423.1;locus_tag=LSA_RS03680;product=CCA tRNA nucleotidyltransferase;protein_id=WP_041817770.1;transl_table=11
NC_015978.1	RefSeq	gene	730899	732161	.	-	.	ID=gene-LSA_RS03685;Name=LSA_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03685;old_locus_tag=LSA_07530
NC_015978.1	Protein Homology	CDS	730899	732161	.	-	0	ID=cds-WP_014082024.1;Parent=gene-LSA_RS03685;Dbxref=Genbank:WP_014082024.1;Name=WP_014082024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013355566.1;locus_tag=LSA_RS03685;product=tetratricopeptide repeat protein;protein_id=WP_014082024.1;transl_table=11
NC_015978.1	RefSeq	gene	732226	732501	.	-	.	ID=gene-LSA_RS03690;Name=LSA_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03690;old_locus_tag=LSA_07540
NC_015978.1	Protein Homology	CDS	732226	732501	.	-	0	ID=cds-WP_014082025.1;Parent=gene-LSA_RS03690;Dbxref=Genbank:WP_014082025.1;Name=WP_014082025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008214712.1;locus_tag=LSA_RS03690;product=HU family DNA-binding protein;protein_id=WP_014082025.1;transl_table=11
NC_015978.1	RefSeq	gene	732688	733995	.	-	.	ID=gene-LSA_RS03695;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=LSA_RS03695;old_locus_tag=LSA_07550
NC_015978.1	Protein Homology	CDS	732688	733995	.	-	0	ID=cds-WP_014082026.1;Parent=gene-LSA_RS03695;Dbxref=Genbank:WP_014082026.1;Name=WP_014082026.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003230565.1;locus_tag=LSA_RS03695;product=ribosome biogenesis GTPase Der;protein_id=WP_014082026.1;transl_table=11
NC_015978.1	RefSeq	gene	734062	735276	.	-	.	ID=gene-LSA_RS03700;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=LSA_RS03700;old_locus_tag=LSA_07560
NC_015978.1	Protein Homology	CDS	734062	735276	.	-	0	ID=cds-WP_041817772.1;Parent=gene-LSA_RS03700;Dbxref=Genbank:WP_041817772.1;Name=WP_041817772.1;Ontology_term=GO:0003676;gbkey=CDS;gene=rpsA;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167194.1;locus_tag=LSA_RS03700;product=30S ribosomal protein S1;protein_id=WP_041817772.1;transl_table=11
NC_015978.1	RefSeq	gene	735367	736047	.	-	.	ID=gene-LSA_RS03705;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=LSA_RS03705;old_locus_tag=LSA_07570
NC_015978.1	Protein Homology	CDS	735367	736047	.	-	0	ID=cds-WP_041817774.1;Parent=gene-LSA_RS03705;Dbxref=Genbank:WP_041817774.1;Name=WP_041817774.1;Ontology_term=GO:0015949,GO:0004127;gbkey=CDS;gene=cmk;go_function=cytidylate kinase activity|0004127||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021415.1;locus_tag=LSA_RS03705;product=(d)CMP kinase;protein_id=WP_041817774.1;transl_table=11
NC_015978.1	RefSeq	gene	736068	736628	.	-	.	ID=gene-LSA_RS03710;Name=LSA_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03710;old_locus_tag=LSA_07580
NC_015978.1	Protein Homology	CDS	736068	736628	.	-	0	ID=cds-WP_014082029.1;Parent=gene-LSA_RS03710;Dbxref=Genbank:WP_014082029.1;Name=WP_014082029.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013630.2;locus_tag=LSA_RS03710;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_014082029.1;transl_table=11
NC_015978.1	RefSeq	gene	736681	738099	.	-	.	ID=gene-LSA_RS03715;Name=LSA_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03715;old_locus_tag=LSA_07590
NC_015978.1	Protein Homology	CDS	736681	738099	.	-	0	ID=cds-WP_225361775.1;Parent=gene-LSA_RS03715;Dbxref=Genbank:WP_225361775.1;Name=WP_225361775.1;Ontology_term=GO:0006310,GO:0004386;gbkey=CDS;go_function=helicase activity|0004386||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167197.1;locus_tag=LSA_RS03715;product=RecQ family ATP-dependent DNA helicase;protein_id=WP_225361775.1;transl_table=11
NC_015978.1	RefSeq	gene	738089	739132	.	-	.	ID=gene-LSA_RS03720;Name=LSA_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03720;old_locus_tag=LSA_07600
NC_015978.1	Protein Homology	CDS	738089	739132	.	-	0	ID=cds-WP_014082031.1;Parent=gene-LSA_RS03720;Dbxref=Genbank:WP_014082031.1;Name=WP_014082031.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025846.2;locus_tag=LSA_RS03720;product=helix-turn-helix domain-containing protein;protein_id=WP_014082031.1;transl_table=11
NC_015978.1	RefSeq	gene	739153	739884	.	-	.	ID=gene-LSA_RS03725;Name=LSA_RS03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03725;old_locus_tag=LSA_07610
NC_015978.1	Protein Homology	CDS	739153	739884	.	-	0	ID=cds-WP_014082032.1;Parent=gene-LSA_RS03725;Dbxref=Genbank:WP_014082032.1;Name=WP_014082032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017868140.1;locus_tag=LSA_RS03725;product=rRNA pseudouridine synthase;protein_id=WP_014082032.1;transl_table=11
NC_015978.1	RefSeq	gene	739877	740452	.	-	.	ID=gene-LSA_RS03730;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=LSA_RS03730;old_locus_tag=LSA_07620
NC_015978.1	Protein Homology	CDS	739877	740452	.	-	0	ID=cds-WP_014082033.1;Parent=gene-LSA_RS03730;Dbxref=Genbank:WP_014082033.1;Name=WP_014082033.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: protein motif:HMM:TIGR00281.1;locus_tag=LSA_RS03730;product=SMC-Scp complex subunit ScpB;protein_id=WP_014082033.1;transl_table=11
NC_015978.1	RefSeq	gene	740456	741175	.	-	.	ID=gene-LSA_RS03735;Name=LSA_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03735;old_locus_tag=LSA_07630
NC_015978.1	Protein Homology	CDS	740456	741175	.	-	0	ID=cds-WP_041817776.1;Parent=gene-LSA_RS03735;Dbxref=Genbank:WP_041817776.1;Name=WP_041817776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021405.1;locus_tag=LSA_RS03735;product=segregation/condensation protein A;protein_id=WP_041817776.1;transl_table=11
NC_015978.1	RefSeq	gene	741162	741524	.	-	.	ID=gene-LSA_RS03740;Name=LSA_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03740;old_locus_tag=LSA_07640
NC_015978.1	Protein Homology	CDS	741162	741524	.	-	0	ID=cds-WP_014082035.1;Parent=gene-LSA_RS03740;Dbxref=Genbank:WP_014082035.1;Name=WP_014082035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167203.1;locus_tag=LSA_RS03740;product=hypothetical protein;protein_id=WP_014082035.1;transl_table=11
NC_015978.1	RefSeq	gene	741535	742422	.	-	.	ID=gene-LSA_RS03745;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=LSA_RS03745;old_locus_tag=LSA_07650
NC_015978.1	Protein Homology	CDS	741535	742422	.	-	0	ID=cds-WP_014082036.1;Parent=gene-LSA_RS03745;Dbxref=Genbank:WP_014082036.1;Name=WP_014082036.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021401.1;locus_tag=LSA_RS03745;product=site-specific tyrosine recombinase XerD;protein_id=WP_014082036.1;transl_table=11
NC_015978.1	RefSeq	gene	742433	743296	.	-	.	ID=gene-LSA_RS03750;Name=LSA_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03750;old_locus_tag=LSA_07660
NC_015978.1	Protein Homology	CDS	742433	743296	.	-	0	ID=cds-WP_014082037.1;Parent=gene-LSA_RS03750;Dbxref=Genbank:WP_014082037.1;Name=WP_014082037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015473781.1;locus_tag=LSA_RS03750;product=S1-like domain-containing RNA-binding protein;protein_id=WP_014082037.1;transl_table=11
NC_015978.1	RefSeq	gene	743402	745162	.	-	.	ID=gene-LSA_RS03755;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=LSA_RS03755;old_locus_tag=LSA_07670
NC_015978.1	Protein Homology	CDS	743402	745162	.	-	0	ID=cds-WP_014082038.1;Parent=gene-LSA_RS03755;Dbxref=Genbank:WP_014082038.1;Name=WP_014082038.1;Ontology_term=GO:0006096,GO:0004743,GO:0005737;gbkey=CDS;gene=pyk;go_component=cytoplasm|0005737||IEA;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167206.1;locus_tag=LSA_RS03755;product=pyruvate kinase;protein_id=WP_014082038.1;transl_table=11
NC_015978.1	RefSeq	gene	745282	748608	.	-	.	ID=gene-LSA_RS03760;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=LSA_RS03760;old_locus_tag=LSA_07680
NC_015978.1	Protein Homology	CDS	745282	748608	.	-	0	ID=cds-WP_014082039.1;Parent=gene-LSA_RS03760;Dbxref=Genbank:WP_014082039.1;Name=WP_014082039.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020280316.1;locus_tag=LSA_RS03760;product=DNA polymerase III subunit alpha;protein_id=WP_014082039.1;transl_table=11
NC_015978.1	RefSeq	gene	748736	748924	.	+	.	ID=gene-LSA_RS03765;Name=LSA_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03765;old_locus_tag=LSA_07690
NC_015978.1	Protein Homology	CDS	748736	748924	.	+	0	ID=cds-WP_014082040.1;Parent=gene-LSA_RS03765;Dbxref=Genbank:WP_014082040.1;Name=WP_014082040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167208.1;locus_tag=LSA_RS03765;product=DUF2929 family protein;protein_id=WP_014082040.1;transl_table=11
NC_015978.1	RefSeq	gene	748987	749802	.	-	.	ID=gene-LSA_RS03770;Name=LSA_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03770;old_locus_tag=LSA_07700
NC_015978.1	Protein Homology	CDS	748987	749802	.	-	0	ID=cds-WP_014082041.1;Parent=gene-LSA_RS03770;Dbxref=Genbank:WP_014082041.1;Name=WP_014082041.1;Ontology_term=GO:0008150,GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007121638.1;locus_tag=LSA_RS03770;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_014082041.1;transl_table=11
NC_015978.1	RefSeq	gene	749789	750493	.	-	.	ID=gene-LSA_RS03775;Name=LSA_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03775;old_locus_tag=LSA_07710
NC_015978.1	Protein Homology	CDS	749789	750493	.	-	0	ID=cds-WP_041817778.1;Parent=gene-LSA_RS03775;Dbxref=Genbank:WP_041817778.1;Name=WP_041817778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021391.1;locus_tag=LSA_RS03775;product=class I SAM-dependent methyltransferase;protein_id=WP_041817778.1;transl_table=11
NC_015978.1	RefSeq	gene	750557	751762	.	-	.	ID=gene-LSA_RS03780;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=LSA_RS03780;old_locus_tag=LSA_07720
NC_015978.1	Protein Homology	CDS	750557	751762	.	-	0	ID=cds-WP_081462408.1;Parent=gene-LSA_RS03780;Dbxref=Genbank:WP_081462408.1;Name=WP_081462408.1;Ontology_term=GO:0006355,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167211.1;locus_tag=LSA_RS03780;product=RNA polymerase sigma factor RpoD;protein_id=WP_081462408.1;transl_table=11
NC_015978.1	RefSeq	gene	751778	753613	.	-	.	ID=gene-LSA_RS03785;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=LSA_RS03785;old_locus_tag=LSA_07730
NC_015978.1	Protein Homology	CDS	751778	753613	.	-	0	ID=cds-WP_014082044.1;Parent=gene-LSA_RS03785;Dbxref=Genbank:WP_014082044.1;Name=WP_014082044.1;Ontology_term=GO:0006269,GO:0003896;gbkey=CDS;gene=dnaG;go_function=DNA primase activity|0003896||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167212.1;locus_tag=LSA_RS03785;product=DNA primase;protein_id=WP_014082044.1;transl_table=11
NC_015978.1	RefSeq	gene	753645	755723	.	-	.	ID=gene-LSA_RS03790;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=LSA_RS03790;old_locus_tag=LSA_07740
NC_015978.1	Protein Homology	CDS	753645	755723	.	-	0	ID=cds-WP_014082045.1;Parent=gene-LSA_RS03790;Dbxref=Genbank:WP_014082045.1;Name=WP_014082045.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyS;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015473787.1;locus_tag=LSA_RS03790;product=glycine--tRNA ligase subunit beta;protein_id=WP_014082045.1;transl_table=11
NC_015978.1	RefSeq	gene	755723	756691	.	-	.	ID=gene-LSA_RS03795;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=LSA_RS03795;old_locus_tag=LSA_07750
NC_015978.1	Protein Homology	CDS	755723	756691	.	-	0	ID=cds-WP_041817780.1;Parent=gene-LSA_RS03795;Dbxref=Genbank:WP_041817780.1;Name=WP_041817780.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyQ;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003681718.1;locus_tag=LSA_RS03795;product=glycine--tRNA ligase subunit alpha;protein_id=WP_041817780.1;transl_table=11
NC_015978.1	RefSeq	gene	756974	757744	.	-	.	ID=gene-LSA_RS03800;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=LSA_RS03800;old_locus_tag=LSA_07760
NC_015978.1	Protein Homology	CDS	756974	757744	.	-	0	ID=cds-WP_014082047.1;Parent=gene-LSA_RS03800;Dbxref=Genbank:WP_014082047.1;Name=WP_014082047.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021383.1;locus_tag=LSA_RS03800;product=DNA repair protein RecO;protein_id=WP_014082047.1;transl_table=11
NC_015978.1	RefSeq	gene	757761	758672	.	-	.	ID=gene-LSA_RS03805;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=LSA_RS03805;old_locus_tag=LSA_07770
NC_015978.1	Protein Homology	CDS	757761	758672	.	-	0	ID=cds-WP_014082048.1;Parent=gene-LSA_RS03805;Dbxref=Genbank:WP_014082048.1;Name=WP_014082048.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011673493.1;locus_tag=LSA_RS03805;product=GTPase Era;protein_id=WP_014082048.1;transl_table=11
NC_015978.1	RefSeq	gene	758688	759086	.	-	.	ID=gene-LSA_RS03810;Name=LSA_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03810;old_locus_tag=LSA_07780
NC_015978.1	Protein Homology	CDS	758688	759086	.	-	0	ID=cds-WP_014082049.1;Parent=gene-LSA_RS03810;Dbxref=Genbank:WP_014082049.1;Name=WP_014082049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020088524.1;locus_tag=LSA_RS03810;product=diacylglycerol kinase family protein;protein_id=WP_014082049.1;transl_table=11
NC_015978.1	RefSeq	gene	759064	759546	.	-	.	ID=gene-LSA_RS03815;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=LSA_RS03815;old_locus_tag=LSA_07790
NC_015978.1	Protein Homology	CDS	759064	759546	.	-	0	ID=cds-WP_041817783.1;Parent=gene-LSA_RS03815;Dbxref=Genbank:WP_041817783.1;Name=WP_041817783.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=ribonuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014939918.1;locus_tag=LSA_RS03815;product=rRNA maturation RNase YbeY;protein_id=WP_041817783.1;transl_table=11
NC_015978.1	RefSeq	gene	759561	760529	.	-	.	ID=gene-LSA_RS03820;Name=LSA_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03820;old_locus_tag=LSA_07800
NC_015978.1	Protein Homology	CDS	759561	760529	.	-	0	ID=cds-WP_041817785.1;Parent=gene-LSA_RS03820;Dbxref=Genbank:WP_041817785.1;Name=WP_041817785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167219.1;locus_tag=LSA_RS03820;product=PhoH family protein;protein_id=WP_041817785.1;transl_table=11
NC_015978.1	RefSeq	gene	760608	761051	.	-	.	ID=gene-LSA_RS03825;Name=LSA_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03825;old_locus_tag=LSA_07810
NC_015978.1	Protein Homology	CDS	760608	761051	.	-	0	ID=cds-WP_014082052.1;Parent=gene-LSA_RS03825;Dbxref=Genbank:WP_014082052.1;Name=WP_014082052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010622232.1;locus_tag=LSA_RS03825;product=GatB/YqeY domain-containing protein;protein_id=WP_014082052.1;transl_table=11
NC_015978.1	RefSeq	gene	761118	761318	.	-	.	ID=gene-LSA_RS03830;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=LSA_RS03830;old_locus_tag=LSA_07820
NC_015978.1	Protein Homology	CDS	761118	761318	.	-	0	ID=cds-WP_014082053.1;Parent=gene-LSA_RS03830;Dbxref=Genbank:WP_014082053.1;Name=WP_014082053.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsU;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021374.1;locus_tag=LSA_RS03830;product=30S ribosomal protein S21;protein_id=WP_014082053.1;transl_table=11
NC_015978.1	RefSeq	gene	761481	762296	.	+	.	ID=gene-LSA_RS03835;Name=LSA_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03835;old_locus_tag=LSA_07830
NC_015978.1	Protein Homology	CDS	761481	762296	.	+	0	ID=cds-WP_041817787.1;Parent=gene-LSA_RS03835;Dbxref=Genbank:WP_041817787.1;Name=WP_041817787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167220.1;locus_tag=LSA_RS03835;product=kinase/pyrophosphorylase;protein_id=WP_041817787.1;transl_table=11
NC_015978.1	RefSeq	gene	762286	763197	.	-	.	ID=gene-LSA_RS03840;Name=LSA_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03840;old_locus_tag=LSA_07840
NC_015978.1	Protein Homology	CDS	762286	763197	.	-	0	ID=cds-WP_041817789.1;Parent=gene-LSA_RS03840;Dbxref=Genbank:WP_041817789.1;Name=WP_041817789.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010619745.1;locus_tag=LSA_RS03840;product=deoxyribonuclease IV;protein_id=WP_041817789.1;transl_table=11
NC_015978.1	RefSeq	gene	763199	764356	.	-	.	ID=gene-LSA_RS03845;Name=LSA_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03845;old_locus_tag=LSA_07850
NC_015978.1	Protein Homology	CDS	763199	764356	.	-	0	ID=cds-WP_014082056.1;Parent=gene-LSA_RS03845;Dbxref=Genbank:WP_014082056.1;Name=WP_014082056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167222.1;locus_tag=LSA_RS03845;product=CDP-glycerol glycerophosphotransferase family protein;protein_id=WP_014082056.1;transl_table=11
NC_015978.1	RefSeq	gene	764379	765257	.	-	.	ID=gene-LSA_RS03850;Name=LSA_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03850;old_locus_tag=LSA_07860
NC_015978.1	Protein Homology	CDS	764379	765257	.	-	0	ID=cds-WP_041817791.1;Parent=gene-LSA_RS03850;Dbxref=Genbank:WP_041817791.1;Name=WP_041817791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167223.1;locus_tag=LSA_RS03850;product=YitT family protein;protein_id=WP_041817791.1;transl_table=11
NC_015978.1	RefSeq	gene	765363	767147	.	-	.	ID=gene-LSA_RS03855;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=LSA_RS03855;old_locus_tag=LSA_07870
NC_015978.1	Protein Homology	CDS	765363	767147	.	-	0	ID=cds-WP_014082058.1;Parent=gene-LSA_RS03855;Dbxref=Genbank:WP_014082058.1;Name=WP_014082058.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010619740.1;locus_tag=LSA_RS03855;product=aspartate--tRNA ligase;protein_id=WP_014082058.1;transl_table=11
NC_015978.1	RefSeq	gene	767477	768322	.	+	.	ID=gene-LSA_RS03860;Name=LSA_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03860;old_locus_tag=LSA_07880
NC_015978.1	Protein Homology	CDS	767477	768322	.	+	0	ID=cds-WP_041817793.1;Parent=gene-LSA_RS03860;Dbxref=Genbank:WP_041817793.1;Name=WP_041817793.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021365.1;locus_tag=LSA_RS03860;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_041817793.1;transl_table=11
NC_015978.1	RefSeq	gene	768373	769002	.	-	.	ID=gene-LSA_RS03865;Name=LSA_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03865;old_locus_tag=LSA_07890
NC_015978.1	Protein Homology	CDS	768373	769002	.	-	0	ID=cds-WP_014082060.1;Parent=gene-LSA_RS03865;Dbxref=Genbank:WP_014082060.1;Name=WP_014082060.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: protein motif:HMM:NF024811.2;locus_tag=LSA_RS03865;product=HAD-IA family hydrolase;protein_id=WP_014082060.1;transl_table=11
NC_015978.1	RefSeq	gene	769002	769448	.	-	.	ID=gene-LSA_RS03870;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=LSA_RS03870;old_locus_tag=LSA_07900
NC_015978.1	Protein Homology	CDS	769002	769448	.	-	0	ID=cds-WP_014082061.1;Parent=gene-LSA_RS03870;Dbxref=Genbank:WP_014082061.1;Name=WP_014082061.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010750335.1;locus_tag=LSA_RS03870;product=D-aminoacyl-tRNA deacylase;protein_id=WP_014082061.1;transl_table=11
NC_015978.1	RefSeq	gene	769462	771687	.	-	.	ID=gene-LSA_RS03875;Name=LSA_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03875;old_locus_tag=LSA_07910
NC_015978.1	Protein Homology	CDS	769462	771687	.	-	0	ID=cds-WP_014082062.1;Parent=gene-LSA_RS03875;Dbxref=Genbank:WP_014082062.1;Name=WP_014082062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167229.1;locus_tag=LSA_RS03875;product=bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=WP_014082062.1;transl_table=11
NC_015978.1	RefSeq	gene	771762	772496	.	-	.	ID=gene-LSA_RS03880;Name=LSA_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03880;old_locus_tag=LSA_07920
NC_015978.1	Protein Homology	CDS	771762	772496	.	-	0	ID=cds-WP_014082063.1;Parent=gene-LSA_RS03880;Dbxref=Genbank:WP_014082063.1;Name=WP_014082063.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003694143.1;locus_tag=LSA_RS03880;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_014082063.1;transl_table=11
NC_015978.1	RefSeq	gene	772499	773377	.	-	.	ID=gene-LSA_RS03885;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=LSA_RS03885;old_locus_tag=LSA_07930
NC_015978.1	Protein Homology	CDS	772499	773377	.	-	0	ID=cds-WP_041817795.1;Parent=gene-LSA_RS03885;Dbxref=Genbank:WP_041817795.1;Name=WP_041817795.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003710056.1;locus_tag=LSA_RS03885;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_041817795.1;transl_table=11
NC_015978.1	RefSeq	gene	773448	773756	.	-	.	ID=gene-LSA_RS03890;Name=LSA_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03890;old_locus_tag=LSA_07940
NC_015978.1	Protein Homology	CDS	773448	773756	.	-	0	ID=cds-WP_014082065.1;Parent=gene-LSA_RS03890;Dbxref=Genbank:WP_014082065.1;Name=WP_014082065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167232.1;locus_tag=LSA_RS03890;product=hypothetical protein;protein_id=WP_014082065.1;transl_table=11
NC_015978.1	RefSeq	gene	773905	774294	.	-	.	ID=gene-LSA_RS03895;Name=LSA_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03895;old_locus_tag=LSA_07950
NC_015978.1	Protein Homology	CDS	773905	774294	.	-	0	ID=cds-WP_014082066.1;Parent=gene-LSA_RS03895;Dbxref=Genbank:WP_014082066.1;Name=WP_014082066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003550611.1;locus_tag=LSA_RS03895;product=VOC family protein;protein_id=WP_014082066.1;transl_table=11
NC_015978.1	RefSeq	gene	774473	774742	.	+	.	ID=gene-LSA_RS03900;Name=LSA_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03900;old_locus_tag=LSA_07960
NC_015978.1	Protein Homology	CDS	774473	774742	.	+	0	ID=cds-WP_014082067.1;Parent=gene-LSA_RS03900;Dbxref=Genbank:WP_014082067.1;Name=WP_014082067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021345.1;locus_tag=LSA_RS03900;product=hypothetical protein;protein_id=WP_014082067.1;transl_table=11
NC_015978.1	RefSeq	gene	774758	775987	.	-	.	ID=gene-LSA_RS03905;Name=LSA_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03905;old_locus_tag=LSA_07970
NC_015978.1	Protein Homology	CDS	774758	775987	.	-	0	ID=cds-WP_014082068.1;Parent=gene-LSA_RS03905;Dbxref=Genbank:WP_014082068.1;Name=WP_014082068.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012970.2;locus_tag=LSA_RS03905;product=serine hydrolase;protein_id=WP_014082068.1;transl_table=11
NC_015978.1	RefSeq	gene	776066	776680	.	-	.	ID=gene-LSA_RS03910;Name=LSA_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03910;old_locus_tag=LSA_07980
NC_015978.1	Protein Homology	CDS	776066	776680	.	-	0	ID=cds-WP_014082069.1;Parent=gene-LSA_RS03910;Dbxref=Genbank:WP_014082069.1;Name=WP_014082069.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025636.2;locus_tag=LSA_RS03910;product=TetR/AcrR family transcriptional regulator;protein_id=WP_014082069.1;transl_table=11
NC_015978.1	RefSeq	gene	776875	777939	.	+	.	ID=gene-LSA_RS03915;Name=LSA_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03915;old_locus_tag=LSA_07990
NC_015978.1	GeneMarkS-2+	CDS	776875	777939	.	+	0	ID=cds-WP_041817797.1;Parent=gene-LSA_RS03915;Dbxref=Genbank:WP_041817797.1;Name=WP_041817797.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS03915;product=hypothetical protein;protein_id=WP_041817797.1;transl_table=11
NC_015978.1	RefSeq	gene	778019	778363	.	+	.	ID=gene-LSA_RS03920;Name=LSA_RS03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03920;old_locus_tag=LSA_08000
NC_015978.1	GeneMarkS-2+	CDS	778019	778363	.	+	0	ID=cds-WP_049777607.1;Parent=gene-LSA_RS03920;Dbxref=Genbank:WP_049777607.1;Name=WP_049777607.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS03920;product=hypothetical protein;protein_id=WP_049777607.1;transl_table=11
NC_015978.1	RefSeq	gene	778457	778993	.	+	.	ID=gene-LSA_RS07900;Name=LSA_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07900;old_locus_tag=LSA_08010
NC_015978.1	GeneMarkS-2+	CDS	778457	778993	.	+	0	ID=cds-WP_014082071.1;Parent=gene-LSA_RS07900;Dbxref=Genbank:WP_014082071.1;Name=WP_014082071.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS07900;product=hypothetical protein;protein_id=WP_014082071.1;transl_table=11
NC_015978.1	RefSeq	gene	779008	779490	.	+	.	ID=gene-LSA_RS03930;Name=LSA_RS03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03930;old_locus_tag=LSA_08020
NC_015978.1	GeneMarkS-2+	CDS	779008	779490	.	+	0	ID=cds-WP_041817799.1;Parent=gene-LSA_RS03930;Dbxref=Genbank:WP_041817799.1;Name=WP_041817799.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS03930;product=hypothetical protein;protein_id=WP_041817799.1;transl_table=11
NC_015978.1	RefSeq	gene	779552	780085	.	+	.	ID=gene-LSA_RS03935;Name=LSA_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03935;old_locus_tag=LSA_08030
NC_015978.1	GeneMarkS-2+	CDS	779552	780085	.	+	0	ID=cds-WP_041817801.1;Parent=gene-LSA_RS03935;Dbxref=Genbank:WP_041817801.1;Name=WP_041817801.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS03935;product=hypothetical protein;protein_id=WP_041817801.1;transl_table=11
NC_015978.1	RefSeq	gene	780161	780289	.	+	.	ID=gene-LSA_RS07905;Name=LSA_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07905;old_locus_tag=LSA_08040
NC_015978.1	Protein Homology	CDS	780161	780289	.	+	0	ID=cds-WP_014082072.1;Parent=gene-LSA_RS07905;Dbxref=Genbank:WP_014082072.1;Name=WP_014082072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022115.1;locus_tag=LSA_RS07905;product=hypothetical protein;protein_id=WP_014082072.1;transl_table=11
NC_015978.1	RefSeq	gene	780385	782223	.	-	.	ID=gene-LSA_RS03940;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=LSA_RS03940;old_locus_tag=LSA_08050
NC_015978.1	Protein Homology	CDS	780385	782223	.	-	0	ID=cds-WP_014082073.1;Parent=gene-LSA_RS03940;Dbxref=Genbank:WP_014082073.1;Name=WP_014082073.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013727807.1;locus_tag=LSA_RS03940;product=translation elongation factor 4;protein_id=WP_014082073.1;transl_table=11
NC_015978.1	RefSeq	gene	782394	782570	.	-	.	ID=gene-LSA_RS07750;Name=LSA_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07750;old_locus_tag=LSA_08060
NC_015978.1	Protein Homology	CDS	782394	782570	.	-	0	ID=cds-WP_153198633.1;Parent=gene-LSA_RS07750;Dbxref=Genbank:WP_153198633.1;Name=WP_153198633.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025636.2;locus_tag=LSA_RS07750;product=TetR family transcriptional regulator C-terminal domain-containing protein;protein_id=WP_153198633.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	782605	783464	.	-	.	ID=gene-LSA_RS03945;Name=LSA_RS03945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS03945;pseudo=true
NC_015978.1	Protein Homology	CDS	782605	783464	.	-	0	ID=cds-LSA_RS03945;Parent=gene-LSA_RS03945;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558186.1;locus_tag=LSA_RS03945;product=IS3 family transposase;pseudo=true;transl_table=11
NC_015978.1	RefSeq	gene	783624	783938	.	+	.	ID=gene-LSA_RS03955;Name=LSA_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS03955;old_locus_tag=LSA_08100
NC_015978.1	GeneMarkS-2+	CDS	783624	783938	.	+	0	ID=cds-WP_014082075.1;Parent=gene-LSA_RS03955;Dbxref=Genbank:WP_014082075.1;Name=WP_014082075.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS03955;product=hypothetical protein;protein_id=WP_014082075.1;transl_table=11
NC_015978.1	RefSeq	gene	784000	785133	.	-	.	ID=gene-LSA_RS03960;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=LSA_RS03960;old_locus_tag=LSA_08110
NC_015978.1	Protein Homology	CDS	784000	785133	.	-	0	ID=cds-WP_014082076.1;Parent=gene-LSA_RS03960;Dbxref=Genbank:WP_014082076.1;Name=WP_014082076.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=dnaJ;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020280352.1;locus_tag=LSA_RS03960;product=molecular chaperone DnaJ;protein_id=WP_014082076.1;transl_table=11
NC_015978.1	RefSeq	gene	785224	787068	.	-	.	ID=gene-LSA_RS03965;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=LSA_RS03965;old_locus_tag=LSA_08120
NC_015978.1	Protein Homology	CDS	785224	787068	.	-	0	ID=cds-WP_014082077.1;Parent=gene-LSA_RS03965;Dbxref=Genbank:WP_014082077.1;Name=WP_014082077.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014562323.1;locus_tag=LSA_RS03965;product=molecular chaperone DnaK;protein_id=WP_014082077.1;transl_table=11
NC_015978.1	RefSeq	gene	787118	787660	.	-	.	ID=gene-LSA_RS03970;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=LSA_RS03970;old_locus_tag=LSA_08130
NC_015978.1	Protein Homology	CDS	787118	787660	.	-	0	ID=cds-WP_041817803.1;Parent=gene-LSA_RS03970;Dbxref=Genbank:WP_041817803.1;Name=WP_041817803.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011475827.1;locus_tag=LSA_RS03970;product=nucleotide exchange factor GrpE;protein_id=WP_041817803.1;transl_table=11
NC_015978.1	RefSeq	gene	787674	788714	.	-	.	ID=gene-LSA_RS03975;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=LSA_RS03975;old_locus_tag=LSA_08140
NC_015978.1	Protein Homology	CDS	787674	788714	.	-	0	ID=cds-WP_049777608.1;Parent=gene-LSA_RS03975;Dbxref=Genbank:WP_049777608.1;Name=WP_049777608.1;Ontology_term=GO:0009408,GO:0005737;gbkey=CDS;gene=hrcA;go_component=cytoplasm|0005737||IEA;go_process=response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021338.1;locus_tag=LSA_RS03975;product=heat-inducible transcriptional repressor HrcA;protein_id=WP_049777608.1;transl_table=11
NC_015978.1	RefSeq	gene	788807	789748	.	-	.	ID=gene-LSA_RS03980;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=LSA_RS03980;old_locus_tag=LSA_08150
NC_015978.1	Protein Homology	CDS	788807	789748	.	-	0	ID=cds-WP_014082080.1;Parent=gene-LSA_RS03980;Dbxref=Genbank:WP_014082080.1;Name=WP_014082080.1;Ontology_term=GO:0006747,GO:0009398,GO:0003919,GO:0005737;gbkey=CDS;gene=ribF;go_component=cytoplasm|0005737||IEA;go_function=FMN adenylyltransferase activity|0003919||IEA;go_process=FAD biosynthetic process|0006747||IEA,FMN biosynthetic process|0009398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010619724.1;locus_tag=LSA_RS03980;product=riboflavin biosynthesis protein RibF;protein_id=WP_014082080.1;transl_table=11
NC_015978.1	RefSeq	gene	789757	790668	.	-	.	ID=gene-LSA_RS03985;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=LSA_RS03985;old_locus_tag=LSA_08160
NC_015978.1	Protein Homology	CDS	789757	790668	.	-	0	ID=cds-WP_014082081.1;Parent=gene-LSA_RS03985;Dbxref=Genbank:WP_014082081.1;Name=WP_014082081.1;Ontology_term=GO:0006400,GO:0004730;gbkey=CDS;gene=truB;go_function=pseudouridylate synthase activity|0004730||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003640716.1;locus_tag=LSA_RS03985;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_014082081.1;transl_table=11
NC_015978.1	RefSeq	gene	790734	791084	.	-	.	ID=gene-LSA_RS03990;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=LSA_RS03990;old_locus_tag=LSA_08170
NC_015978.1	Protein Homology	CDS	790734	791084	.	-	0	ID=cds-WP_014082082.1;Parent=gene-LSA_RS03990;Dbxref=Genbank:WP_014082082.1;Name=WP_014082082.1;Ontology_term=GO:0006396,GO:0019843;gbkey=CDS;gene=rbfA;go_function=rRNA binding|0019843||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020088579.1;locus_tag=LSA_RS03990;product=30S ribosome-binding factor RbfA;protein_id=WP_014082082.1;transl_table=11
NC_015978.1	RefSeq	gene	791105	793501	.	-	.	ID=gene-LSA_RS03995;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=LSA_RS03995;old_locus_tag=LSA_08180
NC_015978.1	Protein Homology	CDS	791105	793501	.	-	0	ID=cds-WP_014082083.1;Parent=gene-LSA_RS03995;Dbxref=Genbank:WP_014082083.1;Name=WP_014082083.1;Ontology_term=GO:0006413,GO:0003743,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016511337.1;locus_tag=LSA_RS03995;product=translation initiation factor IF-2;protein_id=WP_014082083.1;transl_table=11
NC_015978.1	RefSeq	gene	793518	793820	.	-	.	ID=gene-LSA_RS04000;Name=LSA_RS04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04000;old_locus_tag=LSA_08190
NC_015978.1	Protein Homology	CDS	793518	793820	.	-	0	ID=cds-WP_014082084.1;Parent=gene-LSA_RS04000;Dbxref=Genbank:WP_014082084.1;Name=WP_014082084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021332.1;locus_tag=LSA_RS04000;product=ribosomal L7Ae/L30e/S12e/Gadd45 family protein;protein_id=WP_014082084.1;transl_table=11
NC_015978.1	RefSeq	gene	793807	794109	.	-	.	ID=gene-LSA_RS04005;Name=LSA_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04005;old_locus_tag=LSA_08200
NC_015978.1	Protein Homology	CDS	793807	794109	.	-	0	ID=cds-WP_041817808.1;Parent=gene-LSA_RS04005;Dbxref=Genbank:WP_041817808.1;Name=WP_041817808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021330.1;locus_tag=LSA_RS04005;product=YlxR family protein;protein_id=WP_041817808.1;transl_table=11
NC_015978.1	RefSeq	gene	794130	795221	.	-	.	ID=gene-LSA_RS04010;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=LSA_RS04010;old_locus_tag=LSA_08210
NC_015978.1	Protein Homology	CDS	794130	795221	.	-	0	ID=cds-WP_041817810.1;Parent=gene-LSA_RS04010;Dbxref=Genbank:WP_041817810.1;Name=WP_041817810.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010619718.1;locus_tag=LSA_RS04010;product=transcription termination factor NusA;protein_id=WP_041817810.1;transl_table=11
NC_015978.1	RefSeq	gene	795236	795718	.	-	.	ID=gene-LSA_RS04015;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=LSA_RS04015;old_locus_tag=LSA_08220
NC_015978.1	Protein Homology	CDS	795236	795718	.	-	0	ID=cds-WP_014082086.1;Parent=gene-LSA_RS04015;Dbxref=Genbank:WP_014082086.1;Name=WP_014082086.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167245.1;locus_tag=LSA_RS04015;product=ribosome maturation factor RimP;protein_id=WP_014082086.1;transl_table=11
NC_015978.1	RefSeq	gene	795835	800142	.	-	.	ID=gene-LSA_RS04020;Name=LSA_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04020;old_locus_tag=LSA_08230
NC_015978.1	Protein Homology	CDS	795835	800142	.	-	0	ID=cds-WP_014082087.1;Parent=gene-LSA_RS04020;Dbxref=Genbank:WP_014082087.1;Name=WP_014082087.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013727794.1;locus_tag=LSA_RS04020;product=PolC-type DNA polymerase III;protein_id=WP_014082087.1;transl_table=11
NC_015978.1	RefSeq	gene	800197	801903	.	-	.	ID=gene-LSA_RS04025;Name=LSA_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04025;old_locus_tag=LSA_08240
NC_015978.1	Protein Homology	CDS	800197	801903	.	-	0	ID=cds-WP_014082088.1;Parent=gene-LSA_RS04025;Dbxref=Genbank:WP_014082088.1;Name=WP_014082088.1;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA editing activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021324.1;locus_tag=LSA_RS04025;product=proline--tRNA ligase;protein_id=WP_014082088.1;transl_table=11
NC_015978.1	RefSeq	gene	801919	803196	.	-	.	ID=gene-LSA_RS04030;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=LSA_RS04030;old_locus_tag=LSA_08250
NC_015978.1	Protein Homology	CDS	801919	803196	.	-	0	ID=cds-WP_014082089.1;Parent=gene-LSA_RS04030;Dbxref=Genbank:WP_014082089.1;Name=WP_014082089.1;Ontology_term=GO:0006508,GO:0004222,GO:0016021;gbkey=CDS;gene=rseP;go_component=integral component of membrane|0016021||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167248.1;locus_tag=LSA_RS04030;product=RIP metalloprotease RseP;protein_id=WP_014082089.1;transl_table=11
NC_015978.1	RefSeq	gene	803216	804004	.	-	.	ID=gene-LSA_RS04035;Name=LSA_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04035;old_locus_tag=LSA_08260
NC_015978.1	Protein Homology	CDS	803216	804004	.	-	0	ID=cds-WP_014082090.1;Parent=gene-LSA_RS04035;Dbxref=Genbank:WP_014082090.1;Name=WP_014082090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003553794.1;locus_tag=LSA_RS04035;product=phosphatidate cytidylyltransferase;protein_id=WP_014082090.1;transl_table=11
NC_015978.1	RefSeq	gene	804021	804752	.	-	.	ID=gene-LSA_RS04040;Name=LSA_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04040;old_locus_tag=LSA_08270
NC_015978.1	Protein Homology	CDS	804021	804752	.	-	0	ID=cds-WP_014082091.1;Parent=gene-LSA_RS04040;Dbxref=Genbank:WP_014082091.1;Name=WP_014082091.1;Ontology_term=GO:0016765;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010619712.1;locus_tag=LSA_RS04040;product=isoprenyl transferase;protein_id=WP_014082091.1;transl_table=11
NC_015978.1	RefSeq	gene	804802	805215	.	-	.	ID=gene-LSA_RS04045;Name=LSA_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04045;old_locus_tag=LSA_08280
NC_015978.1	Protein Homology	CDS	804802	805215	.	-	0	ID=cds-WP_014082092.1;Parent=gene-LSA_RS04045;Dbxref=Genbank:WP_014082092.1;Name=WP_014082092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021318.1;locus_tag=LSA_RS04045;product=hypothetical protein;protein_id=WP_014082092.1;transl_table=11
NC_015978.1	RefSeq	gene	805234	805797	.	-	.	ID=gene-LSA_RS04050;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=LSA_RS04050;old_locus_tag=LSA_08290
NC_015978.1	Protein Homology	CDS	805234	805797	.	-	0	ID=cds-WP_014082093.1;Parent=gene-LSA_RS04050;Dbxref=Genbank:WP_014082093.1;Name=WP_014082093.1;Ontology_term=GO:0006412,GO:0008135,GO:0005737;gbkey=CDS;gene=frr;go_component=cytoplasm|0005737||IEA;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015473826.1;locus_tag=LSA_RS04050;product=ribosome recycling factor;protein_id=WP_014082093.1;transl_table=11
NC_015978.1	RefSeq	gene	805800	806522	.	-	.	ID=gene-LSA_RS04055;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=LSA_RS04055;old_locus_tag=LSA_08300
NC_015978.1	Protein Homology	CDS	805800	806522	.	-	0	ID=cds-WP_014082094.1;Parent=gene-LSA_RS04055;Dbxref=Genbank:WP_014082094.1;Name=WP_014082094.1;Ontology_term=GO:0015949,GO:0033862;gbkey=CDS;gene=pyrH;go_function=UMP kinase activity|0033862||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011668022.1;locus_tag=LSA_RS04055;product=UMP kinase;protein_id=WP_014082094.1;transl_table=11
NC_015978.1	RefSeq	gene	806737	807594	.	-	.	ID=gene-LSA_RS04060;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=LSA_RS04060;old_locus_tag=LSA_08310
NC_015978.1	Protein Homology	CDS	806737	807594	.	-	0	ID=cds-WP_180337692.1;Parent=gene-LSA_RS04060;Dbxref=Genbank:WP_180337692.1;Name=WP_180337692.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167252.1;locus_tag=LSA_RS04060;product=translation elongation factor Ts;protein_id=WP_180337692.1;transl_table=11
NC_015978.1	RefSeq	gene	807684	808424	.	-	.	ID=gene-LSA_RS04065;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=LSA_RS04065;old_locus_tag=LSA_08320
NC_015978.1	Protein Homology	CDS	807684	808424	.	-	0	ID=cds-WP_014082096.1;Parent=gene-LSA_RS04065;Dbxref=Genbank:WP_014082096.1;Name=WP_014082096.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsB;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167253.1;locus_tag=LSA_RS04065;product=30S ribosomal protein S2;protein_id=WP_014082096.1;transl_table=11
NC_015978.1	RefSeq	gene	808579	808860	.	-	.	ID=gene-LSA_RS04070;Name=LSA_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04070;old_locus_tag=LSA_08330
NC_015978.1	Protein Homology	CDS	808579	808860	.	-	0	ID=cds-WP_014082097.1;Parent=gene-LSA_RS04070;Dbxref=Genbank:WP_014082097.1;Name=WP_014082097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021307.1;locus_tag=LSA_RS04070;product=GIY-YIG nuclease family protein;protein_id=WP_014082097.1;transl_table=11
NC_015978.1	RefSeq	gene	808850	809605	.	-	.	ID=gene-LSA_RS04075;Name=LSA_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04075;old_locus_tag=LSA_08340
NC_015978.1	Protein Homology	CDS	808850	809605	.	-	0	ID=cds-WP_014082098.1;Parent=gene-LSA_RS04075;Dbxref=Genbank:WP_014082098.1;Name=WP_014082098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017868227.1;locus_tag=LSA_RS04075;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=WP_014082098.1;transl_table=11
NC_015978.1	RefSeq	gene	809680	810309	.	+	.	ID=gene-LSA_RS04080;Name=LSA_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04080;old_locus_tag=LSA_08350
NC_015978.1	Protein Homology	CDS	809680	810309	.	+	0	ID=cds-WP_041817812.1;Parent=gene-LSA_RS04080;Dbxref=Genbank:WP_041817812.1;Name=WP_041817812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167256.1;locus_tag=LSA_RS04080;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=WP_041817812.1;transl_table=11
NC_015978.1	RefSeq	gene	810324	810542	.	-	.	ID=gene-LSA_RS04085;Name=LSA_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04085;old_locus_tag=LSA_08360
NC_015978.1	Protein Homology	CDS	810324	810542	.	-	0	ID=cds-WP_014082100.1;Parent=gene-LSA_RS04085;Dbxref=Genbank:WP_014082100.1;Name=WP_014082100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011668031.1;locus_tag=LSA_RS04085;product=YneF family protein;protein_id=WP_014082100.1;transl_table=11
NC_015978.1	RefSeq	gene	810560	810811	.	-	.	ID=gene-LSA_RS04090;Name=LSA_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04090;old_locus_tag=LSA_08370
NC_015978.1	Protein Homology	CDS	810560	810811	.	-	0	ID=cds-WP_014082101.1;Parent=gene-LSA_RS04090;Dbxref=Genbank:WP_014082101.1;Name=WP_014082101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012391088.1;locus_tag=LSA_RS04090;product=DUF896 domain-containing protein;protein_id=WP_014082101.1;transl_table=11
NC_015978.1	RefSeq	gene	810958	811593	.	+	.	ID=gene-LSA_RS04095;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=LSA_RS04095;old_locus_tag=LSA_08380
NC_015978.1	Protein Homology	CDS	810958	811593	.	+	0	ID=cds-WP_014082102.1;Parent=gene-LSA_RS04095;Dbxref=Genbank:WP_014082102.1;Name=WP_014082102.1;Ontology_term=GO:0006282,GO:0006355,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=regulation of DNA repair|0006282||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020088607.1;locus_tag=LSA_RS04095;product=transcriptional repressor LexA;protein_id=WP_014082102.1;transl_table=11
NC_015978.1	RefSeq	gene	811860	812360	.	-	.	ID=gene-LSA_RS04100;Name=LSA_RS04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04100;old_locus_tag=LSA_08390
NC_015978.1	Protein Homology	CDS	811860	812360	.	-	0	ID=cds-WP_014082103.1;Parent=gene-LSA_RS04100;Dbxref=Genbank:WP_014082103.1;Name=WP_014082103.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167260.1;locus_tag=LSA_RS04100;product=phosphatidylglycerophosphatase A;protein_id=WP_014082103.1;transl_table=11
NC_015978.1	RefSeq	gene	812706	813353	.	-	.	ID=gene-LSA_RS04105;Name=LSA_RS04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04105;old_locus_tag=LSA_08410
NC_015978.1	Protein Homology	CDS	812706	813353	.	-	0	ID=cds-WP_049777609.1;Parent=gene-LSA_RS04105;Dbxref=Genbank:WP_049777609.1;Name=WP_049777609.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014566.2;locus_tag=LSA_RS04105;product=CPBP family intramembrane metalloprotease;protein_id=WP_049777609.1;transl_table=11
NC_015978.1	RefSeq	gene	813385	813621	.	-	.	ID=gene-LSA_RS04110;Name=LSA_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04110;old_locus_tag=LSA_08420
NC_015978.1	GeneMarkS-2+	CDS	813385	813621	.	-	0	ID=cds-WP_014082106.1;Parent=gene-LSA_RS04110;Dbxref=Genbank:WP_014082106.1;Name=WP_014082106.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS04110;product=hypothetical protein;protein_id=WP_014082106.1;transl_table=11
NC_015978.1	RefSeq	gene	813743	814375	.	+	.	ID=gene-LSA_RS04115;Name=LSA_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04115;old_locus_tag=LSA_08430
NC_015978.1	Protein Homology	CDS	813743	814375	.	+	0	ID=cds-WP_014082107.1;Parent=gene-LSA_RS04115;Dbxref=Genbank:WP_014082107.1;Name=WP_014082107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021710.1;locus_tag=LSA_RS04115;product=deoxynucleoside kinase;protein_id=WP_014082107.1;transl_table=11
NC_015978.1	RefSeq	gene	814405	815556	.	-	.	ID=gene-LSA_RS04120;Name=LSA_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04120;old_locus_tag=LSA_08440
NC_015978.1	Protein Homology	CDS	814405	815556	.	-	0	ID=cds-WP_014082108.1;Parent=gene-LSA_RS04120;Dbxref=Genbank:WP_014082108.1;Name=WP_014082108.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022398.1;locus_tag=LSA_RS04120;product=ArgE/DapE family deacylase;protein_id=WP_014082108.1;transl_table=11
NC_015978.1	RefSeq	gene	815571	816407	.	-	.	ID=gene-LSA_RS04125;Name=LSA_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04125;old_locus_tag=LSA_08450
NC_015978.1	Protein Homology	CDS	815571	816407	.	-	0	ID=cds-WP_041817816.1;Parent=gene-LSA_RS04125;Dbxref=Genbank:WP_041817816.1;Name=WP_041817816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003688234.1;locus_tag=LSA_RS04125;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_041817816.1;transl_table=11
NC_015978.1	cmsearch	binding_site	816449	816677	.	-	.	ID=id-NC_015978.1:816449..816677;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1
NC_015978.1	RefSeq	gene	816731	818134	.	-	.	ID=gene-LSA_RS04130;Name=pepV;gbkey=Gene;gene=pepV;gene_biotype=protein_coding;locus_tag=LSA_RS04130;old_locus_tag=LSA_08460
NC_015978.1	Protein Homology	CDS	816731	818134	.	-	0	ID=cds-WP_041817818.1;Parent=gene-LSA_RS04130;Dbxref=Genbank:WP_041817818.1;Name=WP_041817818.1;Ontology_term=GO:0008270,GO:0016805;gbkey=CDS;gene=pepV;go_function=zinc ion binding|0008270||IEA,dipeptidase activity|0016805||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011667818.1;locus_tag=LSA_RS04130;product=dipeptidase PepV;protein_id=WP_041817818.1;transl_table=11
NC_015978.1	RefSeq	gene	818221	819057	.	+	.	ID=gene-LSA_RS04135;Name=LSA_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04135;old_locus_tag=LSA_08470
NC_015978.1	Protein Homology	CDS	818221	819057	.	+	0	ID=cds-WP_041817820.1;Parent=gene-LSA_RS04135;Dbxref=Genbank:WP_041817820.1;Name=WP_041817820.1;Ontology_term=GO:0052855;gbkey=CDS;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021714.1;locus_tag=LSA_RS04135;product=NAD(P)H-hydrate dehydratase;protein_id=WP_041817820.1;transl_table=11
NC_015978.1	RefSeq	gene	819094	820701	.	-	.	ID=gene-LSA_RS04140;Name=LSA_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04140;old_locus_tag=LSA_08480
NC_015978.1	Protein Homology	CDS	819094	820701	.	-	0	ID=cds-WP_049777649.1;Parent=gene-LSA_RS04140;Dbxref=Genbank:WP_049777649.1;Name=WP_049777649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020280091.1;locus_tag=LSA_RS04140;product=polysaccharide biosynthesis protein;protein_id=WP_049777649.1;transl_table=11
NC_015978.1	RefSeq	gene	820831	823251	.	-	.	ID=gene-LSA_RS04145;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=LSA_RS04145;old_locus_tag=LSA_08490
NC_015978.1	Protein Homology	CDS	820831	823251	.	-	0	ID=cds-WP_014082113.1;Parent=gene-LSA_RS04145;Dbxref=Genbank:WP_014082113.1;Name=WP_014082113.1;Ontology_term=GO:0006429,GO:0004823,GO:0005737;gbkey=CDS;gene=leuS;go_component=cytoplasm|0005737||IEA;go_function=leucine-tRNA ligase activity|0004823||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000009448.1;locus_tag=LSA_RS04145;product=leucine--tRNA ligase;protein_id=WP_014082113.1;transl_table=11
NC_015978.1	cmsearch	binding_site	823306	823510	.	-	.	ID=id-NC_015978.1:823306..823510;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1
NC_015978.1	RefSeq	gene	823598	824158	.	+	.	ID=gene-LSA_RS04150;Name=LSA_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04150;old_locus_tag=LSA_08500
NC_015978.1	Protein Homology	CDS	823598	824158	.	+	0	ID=cds-WP_103428494.1;Parent=gene-LSA_RS04150;Dbxref=Genbank:WP_103428494.1;Name=WP_103428494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011667827.1;locus_tag=LSA_RS04150;product=class I SAM-dependent methyltransferase;protein_id=WP_103428494.1;transl_table=11
NC_015978.1	RefSeq	gene	824155	825615	.	-	.	ID=gene-LSA_RS04155;Name=LSA_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04155;old_locus_tag=LSA_08510
NC_015978.1	Protein Homology	CDS	824155	825615	.	-	0	ID=cds-WP_041817824.1;Parent=gene-LSA_RS04155;Dbxref=Genbank:WP_041817824.1;Name=WP_041817824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008842207.1;locus_tag=LSA_RS04155;product=MFS transporter;protein_id=WP_041817824.1;transl_table=11
NC_015978.1	RefSeq	gene	825665	826855	.	-	.	ID=gene-LSA_RS04160;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=LSA_RS04160;old_locus_tag=LSA_08520
NC_015978.1	Protein Homology	CDS	825665	826855	.	-	0	ID=cds-WP_014082116.1;Parent=gene-LSA_RS04160;Dbxref=Genbank:WP_014082116.1;Name=WP_014082116.1;Ontology_term=GO:0006556,GO:0004478;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004561675.1;locus_tag=LSA_RS04160;product=methionine adenosyltransferase;protein_id=WP_014082116.1;transl_table=11
NC_015978.1	cmsearch	riboswitch	826853	826936	.	-	.	ID=id-NC_015978.1:826853..826936;Dbxref=RFAM:RF01767;Note=SMK box riboswitch (SAM-III) riboswitch%3B SAM riboswitches modulate the expression of downstream genes in response to levels of S-adenosylmethionine%3B SMK box riboswitch shares no known similarity to SAM-I and SAM-II;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
NC_015978.1	RefSeq	gene	827022	827711	.	+	.	ID=gene-LSA_RS04165;Name=LSA_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04165;old_locus_tag=LSA_08530
NC_015978.1	GeneMarkS-2+	CDS	827022	827711	.	+	0	ID=cds-WP_041817825.1;Parent=gene-LSA_RS04165;Dbxref=Genbank:WP_041817825.1;Name=WP_041817825.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS04165;product=hypothetical protein;protein_id=WP_041817825.1;transl_table=11
NC_015978.1	RefSeq	gene	827744	828481	.	-	.	ID=gene-LSA_RS04170;Name=LSA_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04170;old_locus_tag=LSA_08540
NC_015978.1	Protein Homology	CDS	827744	828481	.	-	0	ID=cds-WP_041817826.1;Parent=gene-LSA_RS04170;Dbxref=Genbank:WP_041817826.1;Name=WP_041817826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021723.1;locus_tag=LSA_RS04170;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_041817826.1;transl_table=11
NC_015978.1	RefSeq	gene	828481	829176	.	-	.	ID=gene-LSA_RS04175;Name=LSA_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04175;old_locus_tag=LSA_08550
NC_015978.1	Protein Homology	CDS	828481	829176	.	-	0	ID=cds-WP_014082118.1;Parent=gene-LSA_RS04175;Dbxref=Genbank:WP_014082118.1;Name=WP_014082118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167276.1;locus_tag=LSA_RS04175;product=amino acid ABC transporter permease;protein_id=WP_014082118.1;transl_table=11
NC_015978.1	RefSeq	gene	829344	830624	.	-	.	ID=gene-LSA_RS04180;Name=LSA_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04180;old_locus_tag=LSA_08560
NC_015978.1	Protein Homology	CDS	829344	830624	.	-	0	ID=cds-WP_041817827.1;Parent=gene-LSA_RS04180;Dbxref=Genbank:WP_041817827.1;Name=WP_041817827.1;Ontology_term=GO:0015851,GO:0015205,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021728.1;locus_tag=LSA_RS04180;product=NCS2 family nucleobase:cation symporter;protein_id=WP_041817827.1;transl_table=11
NC_015978.1	RefSeq	gene	830783	831952	.	-	.	ID=gene-LSA_RS04185;Name=LSA_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04185;old_locus_tag=LSA_08570
NC_015978.1	Protein Homology	CDS	830783	831952	.	-	0	ID=cds-WP_014082120.1;Parent=gene-LSA_RS04185;Dbxref=Genbank:WP_014082120.1;Name=WP_014082120.1;Ontology_term=GO:0004421;gbkey=CDS;go_function=hydroxymethylglutaryl-CoA synthase activity|0004421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010688806.1;locus_tag=LSA_RS04185;product=hydroxymethylglutaryl-CoA synthase;protein_id=WP_014082120.1;transl_table=11
NC_015978.1	RefSeq	gene	832082	833260	.	-	.	ID=gene-LSA_RS04190;Name=LSA_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04190;old_locus_tag=LSA_08580
NC_015978.1	Protein Homology	CDS	832082	833260	.	-	0	ID=cds-WP_041817828.1;Parent=gene-LSA_RS04190;Dbxref=Genbank:WP_041817828.1;Name=WP_041817828.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003546886.1;locus_tag=LSA_RS04190;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_041817828.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	833437	834796	.	-	.	ID=gene-LSA_RS04195;Name=LSA_RS04195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS04195;pseudo=true
NC_015978.1	Protein Homology	CDS	833437	834796	.	-	0	ID=cds-LSA_RS04195;Parent=gene-LSA_RS04195;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004271074.1;locus_tag=LSA_RS04195;product=FAD-dependent oxidoreductase;pseudo=true;transl_table=11
NC_015978.1	RefSeq	gene	834969	835529	.	+	.	ID=gene-LSA_RS04200;Name=LSA_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04200;old_locus_tag=LSA_08610
NC_015978.1	Protein Homology	CDS	834969	835529	.	+	0	ID=cds-WP_014082122.1;Parent=gene-LSA_RS04200;Dbxref=Genbank:WP_014082122.1;Name=WP_014082122.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028039.2;locus_tag=LSA_RS04200;product=DUF5067 domain-containing protein;protein_id=WP_014082122.1;transl_table=11
NC_015978.1	RefSeq	gene	835601	836278	.	-	.	ID=gene-LSA_RS04205;Name=LSA_RS04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04205
NC_015978.1	Protein Homology	CDS	835601	836278	.	-	0	ID=cds-WP_041817830.1;Parent=gene-LSA_RS04205;Dbxref=Genbank:WP_041817830.1;Name=WP_041817830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003668565.1;locus_tag=LSA_RS04205;product=LysM domain-containing protein;protein_id=WP_041817830.1;transl_table=11
NC_015978.1	RefSeq	gene	836549	837853	.	-	.	ID=gene-LSA_RS04210;Name=LSA_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04210;old_locus_tag=LSA_08630
NC_015978.1	Protein Homology	CDS	836549	837853	.	-	0	ID=cds-WP_041817831.1;Parent=gene-LSA_RS04210;Dbxref=Genbank:WP_041817831.1;Name=WP_041817831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167114.1;locus_tag=LSA_RS04210;product=2-hydroxycarboxylate transporter family protein;protein_id=WP_041817831.1;transl_table=11
NC_015978.1	RefSeq	gene	838380	839054	.	-	.	ID=gene-LSA_RS04215;Name=csn2;gbkey=Gene;gene=csn2;gene_biotype=protein_coding;locus_tag=LSA_RS04215;old_locus_tag=LSA_08640
NC_015978.1	Protein Homology	CDS	838380	839054	.	-	0	ID=cds-WP_014082125.1;Parent=gene-LSA_RS04215;Dbxref=Genbank:WP_014082125.1;Name=WP_014082125.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=csn2;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: protein motif:HMM:TIGR01866.1;locus_tag=LSA_RS04215;product=type II-A CRISPR-associated protein Csn2;protein_id=WP_014082125.1;transl_table=11
NC_015978.1	RefSeq	gene	839051	839356	.	-	.	ID=gene-LSA_RS04220;Name=cas2;gbkey=Gene;gene=cas2;gene_biotype=protein_coding;locus_tag=LSA_RS04220;old_locus_tag=LSA_08650
NC_015978.1	Protein Homology	CDS	839051	839356	.	-	0	ID=cds-WP_041817833.1;Parent=gene-LSA_RS04220;Dbxref=Genbank:WP_041817833.1;Name=WP_041817833.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2;go_function=endoribonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006585734.1;locus_tag=LSA_RS04220;product=CRISPR-associated endonuclease Cas2;protein_id=WP_041817833.1;transl_table=11
NC_015978.1	RefSeq	gene	839334	840239	.	-	.	ID=gene-LSA_RS04225;Name=cas1;gbkey=Gene;gene=cas1;gene_biotype=protein_coding;locus_tag=LSA_RS04225;old_locus_tag=LSA_08660
NC_015978.1	Protein Homology	CDS	839334	840239	.	-	0	ID=cds-WP_014082127.1;Parent=gene-LSA_RS04225;Dbxref=Genbank:WP_014082127.1;Name=WP_014082127.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1;go_function=nucleic acid binding|0003676||IEA,endodeoxyribonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002831106.1;locus_tag=LSA_RS04225;product=type II CRISPR-associated endonuclease Cas1;protein_id=WP_014082127.1;transl_table=11
NC_015978.1	RefSeq	gene	840437	844432	.	-	.	ID=gene-LSA_RS04230;Name=cas9;gbkey=Gene;gene=cas9;gene_biotype=protein_coding;locus_tag=LSA_RS04230;old_locus_tag=LSA_08670
NC_015978.1	Protein Homology	CDS	840437	844432	.	-	0	ID=cds-WP_014082128.1;Parent=gene-LSA_RS04230;Dbxref=Genbank:WP_014082128.1;Name=WP_014082128.1;Note=Cas9%2C originally named Csn1%2C is the large%2C multifunctional signature protein of type II CRISPR/Cas systems. It is well known even to general audiences because its RNA-guided endonuclease activity has made it a popular tool for custom editing of eukaryotic genomes.;Ontology_term=GO:0043571,GO:0004520,GO:0005575;gbkey=CDS;gene=cas9;go_component=cellular_component|0005575||IEA;go_function=endodeoxyribonuclease activity|0004520||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166808.1;locus_tag=LSA_RS04230;product=type II CRISPR RNA-guided endonuclease Cas9;protein_id=WP_014082128.1;transl_table=11
NC_015978.1	RefSeq	gene	844520	845524	.	-	.	ID=gene-LSA_RS04235;Name=LSA_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04235;old_locus_tag=LSA_08680
NC_015978.1	Protein Homology	CDS	844520	845524	.	-	0	ID=cds-WP_041817834.1;Parent=gene-LSA_RS04235;Dbxref=Genbank:WP_041817834.1;Name=WP_041817834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021932.1;locus_tag=LSA_RS04235;product=serine hydrolase;protein_id=WP_041817834.1;transl_table=11
NC_015978.1	RefSeq	gene	845624	845696	.	-	.	ID=gene-LSA_RS04240;Name=LSA_RS04240;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS04240;old_locus_tag=LSA_R00330
NC_015978.1	tRNAscan-SE	tRNA	845624	845696	.	-	.	ID=rna-LSA_RS04240;Parent=gene-LSA_RS04240;anticodon=(pos:complement(845661..845663));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS04240;product=tRNA-Gln
NC_015978.1	tRNAscan-SE	exon	845624	845696	.	-	.	ID=exon-LSA_RS04240-1;Parent=rna-LSA_RS04240;anticodon=(pos:complement(845661..845663));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS04240;product=tRNA-Gln
NC_015978.1	RefSeq	gene	845803	845876	.	+	.	ID=gene-LSA_RS04245;Name=LSA_RS04245;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS04245;old_locus_tag=LSA_R00340
NC_015978.1	tRNAscan-SE	tRNA	845803	845876	.	+	.	ID=rna-LSA_RS04245;Parent=gene-LSA_RS04245;anticodon=(pos:845838..845840);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS04245;product=tRNA-Glu
NC_015978.1	tRNAscan-SE	exon	845803	845876	.	+	.	ID=exon-LSA_RS04245-1;Parent=rna-LSA_RS04245;anticodon=(pos:845838..845840);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS04245;product=tRNA-Glu
NC_015978.1	RefSeq	gene	846022	846561	.	+	.	ID=gene-LSA_RS04250;Name=LSA_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04250;old_locus_tag=LSA_08690
NC_015978.1	Protein Homology	CDS	846022	846561	.	+	0	ID=cds-WP_014082130.1;Parent=gene-LSA_RS04250;Dbxref=Genbank:WP_014082130.1;Name=WP_014082130.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016214.2;locus_tag=LSA_RS04250;product=metal-dependent hydrolase;protein_id=WP_014082130.1;transl_table=11
NC_015978.1	RefSeq	gene	846710	846794	.	-	.	ID=gene-LSA_RS04255;Name=LSA_RS04255;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS04255;old_locus_tag=LSA_R00350
NC_015978.1	tRNAscan-SE	tRNA	846710	846794	.	-	.	ID=rna-LSA_RS04255;Parent=gene-LSA_RS04255;anticodon=(pos:complement(846758..846760));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS04255;product=tRNA-Leu
NC_015978.1	tRNAscan-SE	exon	846710	846794	.	-	.	ID=exon-LSA_RS04255-1;Parent=rna-LSA_RS04255;anticodon=(pos:complement(846758..846760));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS04255;product=tRNA-Leu
NC_015978.1	RefSeq	gene	846823	846893	.	-	.	ID=gene-LSA_RS04260;Name=LSA_RS04260;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS04260;old_locus_tag=LSA_R00360
NC_015978.1	tRNAscan-SE	tRNA	846823	846893	.	-	.	ID=rna-LSA_RS04260;Parent=gene-LSA_RS04260;anticodon=(pos:complement(846859..846861));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS04260;product=tRNA-Cys
NC_015978.1	tRNAscan-SE	exon	846823	846893	.	-	.	ID=exon-LSA_RS04260-1;Parent=rna-LSA_RS04260;anticodon=(pos:complement(846859..846861));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS04260;product=tRNA-Cys
NC_015978.1	RefSeq	gene	846949	847021	.	-	.	ID=gene-LSA_RS04265;Name=LSA_RS04265;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS04265;old_locus_tag=LSA_R00370
NC_015978.1	tRNAscan-SE	tRNA	846949	847021	.	-	.	ID=rna-LSA_RS04265;Parent=gene-LSA_RS04265;anticodon=(pos:complement(846986..846988));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS04265;product=tRNA-His
NC_015978.1	tRNAscan-SE	exon	846949	847021	.	-	.	ID=exon-LSA_RS04265-1;Parent=rna-LSA_RS04265;anticodon=(pos:complement(846986..846988));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS04265;product=tRNA-His
NC_015978.1	RefSeq	gene	847036	847106	.	-	.	ID=gene-LSA_RS04270;Name=LSA_RS04270;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS04270;old_locus_tag=LSA_R00380
NC_015978.1	tRNAscan-SE	tRNA	847036	847106	.	-	.	ID=rna-LSA_RS04270;Parent=gene-LSA_RS04270;anticodon=(pos:complement(847072..847074));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS04270;product=tRNA-Trp
NC_015978.1	tRNAscan-SE	exon	847036	847106	.	-	.	ID=exon-LSA_RS04270-1;Parent=rna-LSA_RS04270;anticodon=(pos:complement(847072..847074));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS04270;product=tRNA-Trp
NC_015978.1	RefSeq	gene	847113	847195	.	-	.	ID=gene-LSA_RS04275;Name=LSA_RS04275;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS04275;old_locus_tag=LSA_R00390
NC_015978.1	tRNAscan-SE	tRNA	847113	847195	.	-	.	ID=rna-LSA_RS04275;Parent=gene-LSA_RS04275;anticodon=(pos:complement(847157..847159));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS04275;product=tRNA-Tyr
NC_015978.1	tRNAscan-SE	exon	847113	847195	.	-	.	ID=exon-LSA_RS04275-1;Parent=rna-LSA_RS04275;anticodon=(pos:complement(847157..847159));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS04275;product=tRNA-Tyr
NC_015978.1	RefSeq	gene	847201	847273	.	-	.	ID=gene-LSA_RS04280;Name=LSA_RS04280;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS04280;old_locus_tag=LSA_R00400
NC_015978.1	tRNAscan-SE	tRNA	847201	847273	.	-	.	ID=rna-LSA_RS04280;Parent=gene-LSA_RS04280;anticodon=(pos:complement(847238..847240));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS04280;product=tRNA-Phe
NC_015978.1	tRNAscan-SE	exon	847201	847273	.	-	.	ID=exon-LSA_RS04280-1;Parent=rna-LSA_RS04280;anticodon=(pos:complement(847238..847240));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS04280;product=tRNA-Phe
NC_015978.1	RefSeq	gene	847334	847408	.	-	.	ID=gene-LSA_RS04285;Name=LSA_RS04285;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS04285;old_locus_tag=LSA_R00410
NC_015978.1	tRNAscan-SE	tRNA	847334	847408	.	-	.	ID=rna-LSA_RS04285;Parent=gene-LSA_RS04285;anticodon=(pos:complement(847371..847373));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS04285;product=tRNA-Asp
NC_015978.1	tRNAscan-SE	exon	847334	847408	.	-	.	ID=exon-LSA_RS04285-1;Parent=rna-LSA_RS04285;anticodon=(pos:complement(847371..847373));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS04285;product=tRNA-Asp
NC_015978.1	RefSeq	gene	847418	847490	.	-	.	ID=gene-LSA_RS04290;Name=LSA_RS04290;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS04290;old_locus_tag=LSA_R00420
NC_015978.1	tRNAscan-SE	tRNA	847418	847490	.	-	.	ID=rna-LSA_RS04290;Parent=gene-LSA_RS04290;anticodon=(pos:complement(847455..847457));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS04290;product=tRNA-Val
NC_015978.1	tRNAscan-SE	exon	847418	847490	.	-	.	ID=exon-LSA_RS04290-1;Parent=rna-LSA_RS04290;anticodon=(pos:complement(847455..847457));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS04290;product=tRNA-Val
NC_015978.1	RefSeq	gene	847495	847566	.	-	.	ID=gene-LSA_RS04295;Name=LSA_RS04295;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS04295;old_locus_tag=LSA_R00430
NC_015978.1	tRNAscan-SE	tRNA	847495	847566	.	-	.	ID=rna-LSA_RS04295;Parent=gene-LSA_RS04295;anticodon=(pos:complement(847531..847533));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS04295;product=tRNA-Glu
NC_015978.1	tRNAscan-SE	exon	847495	847566	.	-	.	ID=exon-LSA_RS04295-1;Parent=rna-LSA_RS04295;anticodon=(pos:complement(847531..847533));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS04295;product=tRNA-Glu
NC_015978.1	RefSeq	gene	847585	847676	.	-	.	ID=gene-LSA_RS04300;Name=LSA_RS04300;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS04300;old_locus_tag=LSA_R00440
NC_015978.1	tRNAscan-SE	tRNA	847585	847676	.	-	.	ID=rna-LSA_RS04300;Parent=gene-LSA_RS04300;anticodon=(pos:complement(847639..847641));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS04300;product=tRNA-Ser
NC_015978.1	tRNAscan-SE	exon	847585	847676	.	-	.	ID=exon-LSA_RS04300-1;Parent=rna-LSA_RS04300;anticodon=(pos:complement(847639..847641));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS04300;product=tRNA-Ser
NC_015978.1	RefSeq	gene	847686	847758	.	-	.	ID=gene-LSA_RS04305;Name=LSA_RS04305;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS04305;old_locus_tag=LSA_R00450
NC_015978.1	tRNAscan-SE	tRNA	847686	847758	.	-	.	ID=rna-LSA_RS04305;Parent=gene-LSA_RS04305;anticodon=(pos:complement(847723..847725));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS04305;product=tRNA-Asn
NC_015978.1	tRNAscan-SE	exon	847686	847758	.	-	.	ID=exon-LSA_RS04305-1;Parent=rna-LSA_RS04305;anticodon=(pos:complement(847723..847725));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS04305;product=tRNA-Asn
NC_015978.1	RefSeq	gene	848026	848679	.	+	.	ID=gene-LSA_RS04310;Name=LSA_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04310;old_locus_tag=LSA_08700
NC_015978.1	Protein Homology	CDS	848026	848679	.	+	0	ID=cds-WP_041817836.1;Parent=gene-LSA_RS04310;Dbxref=Genbank:WP_041817836.1;Name=WP_041817836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022352.1;locus_tag=LSA_RS04310;product=VTT domain-containing protein;protein_id=WP_041817836.1;transl_table=11
NC_015978.1	RefSeq	gene	848676	849320	.	-	.	ID=gene-LSA_RS07265;Name=LSA_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07265;old_locus_tag=LSA_08710
NC_015978.1	Protein Homology	CDS	848676	849320	.	-	0	ID=cds-WP_049777610.1;Parent=gene-LSA_RS07265;Dbxref=Genbank:WP_049777610.1;Name=WP_049777610.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01906.1;locus_tag=LSA_RS07265;product=TIGR01906 family membrane protein;protein_id=WP_049777610.1;transl_table=11
NC_015978.1	RefSeq	gene	849304	850083	.	-	.	ID=gene-LSA_RS04320;Name=LSA_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04320;old_locus_tag=LSA_08720
NC_015978.1	Protein Homology	CDS	849304	850083	.	-	0	ID=cds-WP_014082133.1;Parent=gene-LSA_RS04320;Dbxref=Genbank:WP_014082133.1;Name=WP_014082133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013727772.1;locus_tag=LSA_RS04320;product=TIGR01457 family HAD-type hydrolase;protein_id=WP_014082133.1;transl_table=11
NC_015978.1	RefSeq	gene	850089	850613	.	-	.	ID=gene-LSA_RS04325;Name=LSA_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04325;old_locus_tag=LSA_08730
NC_015978.1	Protein Homology	CDS	850089	850613	.	-	0	ID=cds-WP_014082134.1;Parent=gene-LSA_RS04325;Dbxref=Genbank:WP_014082134.1;Name=WP_014082134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166587.1;locus_tag=LSA_RS04325;product=YutD family protein;protein_id=WP_014082134.1;transl_table=11
NC_015978.1	RefSeq	gene	850603	852000	.	-	.	ID=gene-LSA_RS04330;Name=LSA_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04330;old_locus_tag=LSA_08740
NC_015978.1	Protein Homology	CDS	850603	852000	.	-	0	ID=cds-WP_041817838.1;Parent=gene-LSA_RS04330;Dbxref=Genbank:WP_041817838.1;Name=WP_041817838.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022041.1;locus_tag=LSA_RS04330;product=metallophosphoesterase;protein_id=WP_041817838.1;transl_table=11
NC_015978.1	RefSeq	gene	852131	852979	.	-	.	ID=gene-LSA_RS04335;Name=LSA_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04335;old_locus_tag=LSA_08750
NC_015978.1	Protein Homology	CDS	852131	852979	.	-	0	ID=cds-WP_014082136.1;Parent=gene-LSA_RS04335;Dbxref=Genbank:WP_014082136.1;Name=WP_014082136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021364.1;locus_tag=LSA_RS04335;product=fructosamine kinase family protein;protein_id=WP_014082136.1;transl_table=11
NC_015978.1	RefSeq	gene	853004	854335	.	-	.	ID=gene-LSA_RS04340;Name=LSA_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04340;old_locus_tag=LSA_08760
NC_015978.1	Protein Homology	CDS	853004	854335	.	-	0	ID=cds-WP_041818105.1;Parent=gene-LSA_RS04340;Dbxref=Genbank:WP_041818105.1;Name=WP_041818105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013727768.1;locus_tag=LSA_RS04340;product=amino acid permease;protein_id=WP_041818105.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	854585	855652	.	+	.	ID=gene-LSA_RS04345;Name=LSA_RS04345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS04345;pseudo=true
NC_015978.1	Protein Homology	CDS	854585	855652	.	+	0	ID=cds-LSA_RS04345;Parent=gene-LSA_RS04345;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003714854.1;locus_tag=LSA_RS04345;product=ISL3 family transposase;pseudo=true;transl_table=11
NC_015978.1	RefSeq	gene	855710	856903	.	-	.	ID=gene-LSA_RS04350;Name=LSA_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04350;old_locus_tag=LSA_08790
NC_015978.1	Protein Homology	CDS	855710	856903	.	-	0	ID=cds-WP_014082138.1;Parent=gene-LSA_RS04350;Dbxref=Genbank:WP_014082138.1;Name=WP_014082138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014082138.1;locus_tag=LSA_RS04350;product=acetate kinase;protein_id=WP_014082138.1;transl_table=11
NC_015978.1	RefSeq	gene	856929	857948	.	-	.	ID=gene-LSA_RS04355;Name=LSA_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04355;old_locus_tag=LSA_08800
NC_015978.1	Protein Homology	CDS	856929	857948	.	-	0	ID=cds-WP_041817839.1;Parent=gene-LSA_RS04355;Dbxref=Genbank:WP_041817839.1;Name=WP_041817839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010620732.1;locus_tag=LSA_RS04355;product=class I SAM-dependent methyltransferase;protein_id=WP_041817839.1;transl_table=11
NC_015978.1	RefSeq	gene	858011	858178	.	-	.	ID=gene-LSA_RS07755;Name=LSA_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07755
NC_015978.1	GeneMarkS-2+	CDS	858011	858178	.	-	0	ID=cds-WP_163600766.1;Parent=gene-LSA_RS07755;Dbxref=Genbank:WP_163600766.1;Name=WP_163600766.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS07755;product=hypothetical protein;protein_id=WP_163600766.1;transl_table=11
NC_015978.1	RefSeq	gene	858144	858578	.	-	.	ID=gene-LSA_RS04360;Name=LSA_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04360;old_locus_tag=LSA_08810
NC_015978.1	Protein Homology	CDS	858144	858578	.	-	0	ID=cds-WP_014082140.1;Parent=gene-LSA_RS04360;Dbxref=Genbank:WP_014082140.1;Name=WP_014082140.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027310.2;locus_tag=LSA_RS04360;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_014082140.1;transl_table=11
NC_015978.1	RefSeq	gene	858719	859165	.	-	.	ID=gene-LSA_RS04365;Name=LSA_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04365;old_locus_tag=LSA_08830
NC_015978.1	GeneMarkS-2+	CDS	858719	859165	.	-	0	ID=cds-WP_014082142.1;Parent=gene-LSA_RS04365;Dbxref=Genbank:WP_014082142.1;Name=WP_014082142.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS04365;product=type II secretion system GspH family protein;protein_id=WP_014082142.1;transl_table=11
NC_015978.1	RefSeq	gene	859149	859448	.	-	.	ID=gene-LSA_RS04370;Name=comGC;gbkey=Gene;gene=comGC;gene_biotype=protein_coding;locus_tag=LSA_RS04370;old_locus_tag=LSA_08840
NC_015978.1	Protein Homology	CDS	859149	859448	.	-	0	ID=cds-WP_014082143.1;Parent=gene-LSA_RS04370;Dbxref=Genbank:WP_014082143.1;Name=WP_014082143.1;gbkey=CDS;gene=comGC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017261157.1;locus_tag=LSA_RS04370;product=competence type IV pilus major pilin ComGC;protein_id=WP_014082143.1;transl_table=11
NC_015978.1	RefSeq	gene	859448	860458	.	-	.	ID=gene-LSA_RS04375;Name=LSA_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04375;old_locus_tag=LSA_08850
NC_015978.1	Protein Homology	CDS	859448	860458	.	-	0	ID=cds-WP_041817841.1;Parent=gene-LSA_RS04375;Dbxref=Genbank:WP_041817841.1;Name=WP_041817841.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012694.2;locus_tag=LSA_RS04375;product=type II secretion system F family protein;protein_id=WP_041817841.1;transl_table=11
NC_015978.1	RefSeq	gene	860427	861395	.	-	.	ID=gene-LSA_RS04380;Name=comGA;gbkey=Gene;gene=comGA;gene_biotype=protein_coding;locus_tag=LSA_RS04380;old_locus_tag=LSA_08860
NC_015978.1	Protein Homology	CDS	860427	861395	.	-	0	ID=cds-WP_041817842.1;Parent=gene-LSA_RS04380;Dbxref=Genbank:WP_041817842.1;Name=WP_041817842.1;gbkey=CDS;gene=comGA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022030.1;locus_tag=LSA_RS04380;product=competence type IV pilus ATPase ComGA;protein_id=WP_041817842.1;transl_table=11
NC_015978.1	RefSeq	gene	861475	862215	.	-	.	ID=gene-LSA_RS04385;Name=LSA_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04385;old_locus_tag=LSA_08870
NC_015978.1	Protein Homology	CDS	861475	862215	.	-	0	ID=cds-WP_014082146.1;Parent=gene-LSA_RS04385;Dbxref=Genbank:WP_014082146.1;Name=WP_014082146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011667935.1;locus_tag=LSA_RS04385;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_014082146.1;transl_table=11
NC_015978.1	RefSeq	gene	862293	863300	.	-	.	ID=gene-LSA_RS04390;Name=ccpA;gbkey=Gene;gene=ccpA;gene_biotype=protein_coding;locus_tag=LSA_RS04390;old_locus_tag=LSA_08880
NC_015978.1	Protein Homology	CDS	862293	863300	.	-	0	ID=cds-WP_041817843.1;Parent=gene-LSA_RS04390;Dbxref=Genbank:WP_041817843.1;Name=WP_041817843.1;Ontology_term=GO:0005975,GO:0006355,GO:0001228,GO:0003677;gbkey=CDS;gene=ccpA;go_function=DNA-binding transcription activator activity%2C RNA polymerase II-specific|0001228||IEA,DNA binding|0003677||IEA;go_process=carbohydrate metabolic process|0005975||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166574.1;locus_tag=LSA_RS04390;product=catabolite control protein A;protein_id=WP_041817843.1;transl_table=11
NC_015978.1	RefSeq	gene	863418	863876	.	-	.	ID=gene-LSA_RS07270;Name=LSA_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07270;old_locus_tag=LSA_08890
NC_015978.1	GeneMarkS-2+	CDS	863418	863876	.	-	0	ID=cds-WP_014082148.1;Parent=gene-LSA_RS07270;Dbxref=Genbank:WP_014082148.1;Name=WP_014082148.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS07270;product=YtxH domain-containing protein;protein_id=WP_014082148.1;transl_table=11
NC_015978.1	RefSeq	gene	863902	864285	.	-	.	ID=gene-LSA_RS04400;Name=LSA_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04400;old_locus_tag=LSA_08900
NC_015978.1	Protein Homology	CDS	863902	864285	.	-	0	ID=cds-WP_014082149.1;Parent=gene-LSA_RS04400;Dbxref=Genbank:WP_014082149.1;Name=WP_014082149.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017876.2;locus_tag=LSA_RS04400;product=DUF948 domain-containing protein;protein_id=WP_014082149.1;transl_table=11
NC_015978.1	RefSeq	gene	864432	865430	.	+	.	ID=gene-LSA_RS04405;Name=LSA_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04405;old_locus_tag=LSA_08910
NC_015978.1	Protein Homology	CDS	864432	865430	.	+	0	ID=cds-WP_014082150.1;Parent=gene-LSA_RS04405;Dbxref=Genbank:WP_014082150.1;Name=WP_014082150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011374119.1;locus_tag=LSA_RS04405;product=mechanosensitive ion channel family protein;protein_id=WP_014082150.1;transl_table=11
NC_015978.1	RefSeq	gene	865472	866062	.	-	.	ID=gene-LSA_RS04410;Name=LSA_RS04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04410;old_locus_tag=LSA_08920
NC_015978.1	Protein Homology	CDS	865472	866062	.	-	0	ID=cds-WP_041817845.1;Parent=gene-LSA_RS04410;Dbxref=Genbank:WP_041817845.1;Name=WP_041817845.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166570.1;locus_tag=LSA_RS04410;product=XTP/dITP diphosphatase;protein_id=WP_041817845.1;transl_table=11
NC_015978.1	RefSeq	gene	866052	866867	.	-	.	ID=gene-LSA_RS04415;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=LSA_RS04415;old_locus_tag=LSA_08930
NC_015978.1	Protein Homology	CDS	866052	866867	.	-	0	ID=cds-WP_041817846.1;Parent=gene-LSA_RS04415;Dbxref=Genbank:WP_041817846.1;Name=WP_041817846.1;Ontology_term=GO:0009252,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166569.1;locus_tag=LSA_RS04415;product=glutamate racemase;protein_id=WP_041817846.1;transl_table=11
NC_015978.1	RefSeq	gene	866981	867469	.	+	.	ID=gene-LSA_RS04420;Name=LSA_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04420;old_locus_tag=LSA_08940
NC_015978.1	Protein Homology	CDS	866981	867469	.	+	0	ID=cds-WP_049777611.1;Parent=gene-LSA_RS04420;Dbxref=Genbank:WP_049777611.1;Name=WP_049777611.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022163.2;locus_tag=LSA_RS04420;product=DUF2507 domain-containing protein;protein_id=WP_049777611.1;transl_table=11
NC_015978.1	RefSeq	gene	867533	867838	.	-	.	ID=gene-LSA_RS04425;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=LSA_RS04425;old_locus_tag=LSA_08950
NC_015978.1	Protein Homology	CDS	867533	867838	.	-	0	ID=cds-WP_014082153.1;Parent=gene-LSA_RS04425;Dbxref=Genbank:WP_014082153.1;Name=WP_014082153.1;Ontology_term=GO:0015036,GO:0005737;gbkey=CDS;gene=trxA;go_component=cytoplasm|0005737||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008214876.1;locus_tag=LSA_RS04425;product=thioredoxin;protein_id=WP_014082153.1;transl_table=11
NC_015978.1	RefSeq	gene	867921	870278	.	-	.	ID=gene-LSA_RS04430;Name=LSA_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04430;old_locus_tag=LSA_08960
NC_015978.1	Protein Homology	CDS	867921	870278	.	-	0	ID=cds-WP_014082154.1;Parent=gene-LSA_RS04430;Dbxref=Genbank:WP_014082154.1;Name=WP_014082154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016511478.1;locus_tag=LSA_RS04430;product=endonuclease MutS2;protein_id=WP_014082154.1;transl_table=11
NC_015978.1	RefSeq	gene	870292	870774	.	-	.	ID=gene-LSA_RS04435;Name=LSA_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04435;old_locus_tag=LSA_08970
NC_015978.1	Protein Homology	CDS	870292	870774	.	-	0	ID=cds-WP_014082155.1;Parent=gene-LSA_RS04435;Dbxref=Genbank:WP_014082155.1;Name=WP_014082155.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014704.2;locus_tag=LSA_RS04435;product=CvpA family protein;protein_id=WP_014082155.1;transl_table=11
NC_015978.1	RefSeq	gene	870771	871019	.	-	.	ID=gene-LSA_RS04440;Name=LSA_RS04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04440;old_locus_tag=LSA_08980
NC_015978.1	Protein Homology	CDS	870771	871019	.	-	0	ID=cds-WP_014082156.1;Parent=gene-LSA_RS04440;Dbxref=Genbank:WP_014082156.1;Name=WP_014082156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017867301.1;locus_tag=LSA_RS04440;product=cell division protein ZapA;protein_id=WP_014082156.1;transl_table=11
NC_015978.1	RefSeq	gene	871111	871401	.	-	.	ID=gene-LSA_RS04445;Name=LSA_RS04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04445;old_locus_tag=LSA_08990
NC_015978.1	Protein Homology	CDS	871111	871401	.	-	0	ID=cds-WP_014082157.1;Parent=gene-LSA_RS04445;Dbxref=Genbank:WP_014082157.1;Name=WP_014082157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008857967.1;locus_tag=LSA_RS04445;product=DUF1292 domain-containing protein;protein_id=WP_014082157.1;transl_table=11
NC_015978.1	RefSeq	gene	871416	871838	.	-	.	ID=gene-LSA_RS04450;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=LSA_RS04450;old_locus_tag=LSA_09000
NC_015978.1	Protein Homology	CDS	871416	871838	.	-	0	ID=cds-WP_041817848.1;Parent=gene-LSA_RS04450;Dbxref=Genbank:WP_041817848.1;Name=WP_041817848.1;Ontology_term=GO:0008150,GO:0003674,GO:0005737;gbkey=CDS;gene=ruvX;go_component=cytoplasm|0005737||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166562.1;locus_tag=LSA_RS04450;product=Holliday junction resolvase RuvX;protein_id=WP_041817848.1;transl_table=11
NC_015978.1	RefSeq	gene	871882	874530	.	-	.	ID=gene-LSA_RS04455;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=LSA_RS04455;old_locus_tag=LSA_09010
NC_015978.1	Protein Homology	CDS	871882	874530	.	-	0	ID=cds-WP_014082159.1;Parent=gene-LSA_RS04455;Dbxref=Genbank:WP_014082159.1;Name=WP_014082159.1;Ontology_term=GO:0006419,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011101703.1;locus_tag=LSA_RS04455;product=alanine--tRNA ligase;protein_id=WP_014082159.1;transl_table=11
NC_015978.1	RefSeq	gene	874789	876150	.	-	.	ID=gene-LSA_RS04460;Name=LSA_RS04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04460;old_locus_tag=LSA_09020
NC_015978.1	Protein Homology	CDS	874789	876150	.	-	0	ID=cds-WP_014082160.1;Parent=gene-LSA_RS04460;Dbxref=Genbank:WP_014082160.1;Name=WP_014082160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022007.1;locus_tag=LSA_RS04460;product=DEAD/DEAH box helicase;protein_id=WP_014082160.1;transl_table=11
NC_015978.1	RefSeq	gene	876150	877109	.	-	.	ID=gene-LSA_RS04465;Name=LSA_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04465;old_locus_tag=LSA_09030
NC_015978.1	Protein Homology	CDS	876150	877109	.	-	0	ID=cds-WP_014082161.1;Parent=gene-LSA_RS04465;Dbxref=Genbank:WP_014082161.1;Name=WP_014082161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011667961.1;locus_tag=LSA_RS04465;product=bifunctional oligoribonuclease/PAP phosphatase NrnA;protein_id=WP_014082161.1;transl_table=11
NC_015978.1	RefSeq	gene	877152	878261	.	-	.	ID=gene-LSA_RS04470;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=LSA_RS04470;old_locus_tag=LSA_09040
NC_015978.1	Protein Homology	CDS	877152	878261	.	-	0	ID=cds-WP_041817850.1;Parent=gene-LSA_RS04470;Dbxref=Genbank:WP_041817850.1;Name=WP_041817850.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010622780.1;locus_tag=LSA_RS04470;product=DNA polymerase IV;protein_id=WP_041817850.1;transl_table=11
NC_015978.1	RefSeq	gene	878333	878668	.	-	.	ID=gene-LSA_RS04475;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=LSA_RS04475;old_locus_tag=LSA_09050
NC_015978.1	Protein Homology	CDS	878333	878668	.	-	0	ID=cds-WP_014082163.1;Parent=gene-LSA_RS04475;Dbxref=Genbank:WP_014082163.1;Name=WP_014082163.1;Ontology_term=GO:0009306,GO:0015450,GO:0005887;gbkey=CDS;gene=yajC;go_component=integral component of plasma membrane|0005887||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022003.1;locus_tag=LSA_RS04475;product=preprotein translocase subunit YajC;protein_id=WP_014082163.1;transl_table=11
NC_015978.1	RefSeq	gene	878739	879743	.	-	.	ID=gene-LSA_RS04480;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=LSA_RS04480;old_locus_tag=LSA_09060
NC_015978.1	Protein Homology	CDS	878739	879743	.	-	0	ID=cds-WP_014082164.1;Parent=gene-LSA_RS04480;Dbxref=Genbank:WP_014082164.1;Name=WP_014082164.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020088349.1;locus_tag=LSA_RS04480;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_014082164.1;transl_table=11
NC_015978.1	RefSeq	gene	879755	880357	.	-	.	ID=gene-LSA_RS04485;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=LSA_RS04485;old_locus_tag=LSA_09070
NC_015978.1	Protein Homology	CDS	879755	880357	.	-	0	ID=cds-WP_014082165.1;Parent=gene-LSA_RS04485;Dbxref=Genbank:WP_014082165.1;Name=WP_014082165.1;Ontology_term=GO:0006310,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=four-way junction helicase activity|0009378||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022001.1;locus_tag=LSA_RS04485;product=Holliday junction branch migration protein RuvA;protein_id=WP_014082165.1;transl_table=11
NC_015978.1	RefSeq	gene	880379	882295	.	-	.	ID=gene-LSA_RS04490;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=LSA_RS04490;old_locus_tag=LSA_09080
NC_015978.1	Protein Homology	CDS	880379	882295	.	-	0	ID=cds-WP_014082166.1;Parent=gene-LSA_RS04490;Dbxref=Genbank:WP_014082166.1;Name=WP_014082166.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002833731.1;locus_tag=LSA_RS04490;product=DNA mismatch repair endonuclease MutL;protein_id=WP_014082166.1;transl_table=11
NC_015978.1	RefSeq	gene	882308	884929	.	-	.	ID=gene-LSA_RS04495;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=LSA_RS04495;old_locus_tag=LSA_09090
NC_015978.1	Protein Homology	CDS	882308	884929	.	-	0	ID=cds-WP_014082167.1;Parent=gene-LSA_RS04495;Dbxref=Genbank:WP_014082167.1;Name=WP_014082167.1;Ontology_term=GO:0006298,GO:0005524;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166553.1;locus_tag=LSA_RS04495;product=DNA mismatch repair protein MutS;protein_id=WP_014082167.1;transl_table=11
NC_015978.1	RefSeq	gene	884946	885752	.	-	.	ID=gene-LSA_RS04500;Name=LSA_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04500;old_locus_tag=LSA_09100
NC_015978.1	Protein Homology	CDS	884946	885752	.	-	0	ID=cds-WP_014082168.1;Parent=gene-LSA_RS04500;Dbxref=Genbank:WP_014082168.1;Name=WP_014082168.1;Ontology_term=GO:0008152,GO:0042578;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010620695.1;locus_tag=LSA_RS04500;product=TIGR00282 family metallophosphoesterase;protein_id=WP_014082168.1;transl_table=11
NC_015978.1	RefSeq	gene	885838	887400	.	-	.	ID=gene-LSA_RS04505;Name=rny;gbkey=Gene;gene=rny;gene_biotype=protein_coding;locus_tag=LSA_RS04505;old_locus_tag=LSA_09110
NC_015978.1	Protein Homology	CDS	885838	887400	.	-	0	ID=cds-WP_103434627.1;Parent=gene-LSA_RS04505;Dbxref=Genbank:WP_103434627.1;Name=WP_103434627.1;Ontology_term=GO:0006402,GO:0004521;gbkey=CDS;gene=rny;go_function=endoribonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003644638.1;locus_tag=LSA_RS04505;product=ribonuclease Y;protein_id=WP_103434627.1;transl_table=11
NC_015978.1	RefSeq	gene	887542	888780	.	-	.	ID=gene-LSA_RS04510;Name=LSA_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04510;old_locus_tag=LSA_09120
NC_015978.1	Protein Homology	CDS	887542	888780	.	-	0	ID=cds-WP_014082170.1;Parent=gene-LSA_RS04510;Dbxref=Genbank:WP_014082170.1;Name=WP_014082170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021994.1;locus_tag=LSA_RS04510;product=competence/damage-inducible protein A;protein_id=WP_014082170.1;transl_table=11
NC_015978.1	RefSeq	gene	888800	889387	.	-	.	ID=gene-LSA_RS04515;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=LSA_RS04515;old_locus_tag=LSA_09130
NC_015978.1	Protein Homology	CDS	888800	889387	.	-	0	ID=cds-WP_041817852.1;Parent=gene-LSA_RS04515;Dbxref=Genbank:WP_041817852.1;Name=WP_041817852.1;Ontology_term=GO:0008654,GO:0008444;gbkey=CDS;gene=pgsA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013727726.1;locus_tag=LSA_RS04515;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_041817852.1;transl_table=11
NC_015978.1	RefSeq	gene	889458	890342	.	-	.	ID=gene-LSA_RS04520;Name=LSA_RS04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04520;old_locus_tag=LSA_09140
NC_015978.1	Protein Homology	CDS	889458	890342	.	-	0	ID=cds-WP_014082172.1;Parent=gene-LSA_RS04520;Dbxref=Genbank:WP_014082172.1;Name=WP_014082172.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024252.2;locus_tag=LSA_RS04520;product=helix-turn-helix domain-containing protein;protein_id=WP_014082172.1;transl_table=11
NC_015978.1	RefSeq	gene	890413	891693	.	-	.	ID=gene-LSA_RS04525;Name=LSA_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04525;old_locus_tag=LSA_09150
NC_015978.1	Protein Homology	CDS	890413	891693	.	-	0	ID=cds-WP_014082173.1;Parent=gene-LSA_RS04525;Dbxref=Genbank:WP_014082173.1;Name=WP_014082173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021991.1;locus_tag=LSA_RS04525;product=insulinase family protein;protein_id=WP_014082173.1;transl_table=11
NC_015978.1	RefSeq	gene	891686	892948	.	-	.	ID=gene-LSA_RS04530;Name=LSA_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04530;old_locus_tag=LSA_09160
NC_015978.1	Protein Homology	CDS	891686	892948	.	-	0	ID=cds-WP_041817855.1;Parent=gene-LSA_RS04530;Dbxref=Genbank:WP_041817855.1;Name=WP_041817855.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017044.2;locus_tag=LSA_RS04530;product=insulinase family protein;protein_id=WP_041817855.1;transl_table=11
NC_015978.1	RefSeq	gene	893003	893800	.	-	.	ID=gene-LSA_RS04535;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=LSA_RS04535;old_locus_tag=LSA_09170
NC_015978.1	Protein Homology	CDS	893003	893800	.	-	0	ID=cds-WP_014082175.1;Parent=gene-LSA_RS04535;Dbxref=Genbank:WP_014082175.1;Name=WP_014082175.1;Ontology_term=GO:0000918,GO:0016887;gbkey=CDS;gene=minD;go_function=ATP hydrolysis activity|0016887||IEA;go_process=division septum site selection|0000918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010620684.1;locus_tag=LSA_RS04535;product=septum site-determining protein MinD;protein_id=WP_014082175.1;transl_table=11
NC_015978.1	RefSeq	gene	893803	894480	.	-	.	ID=gene-LSA_RS04540;Name=LSA_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04540;old_locus_tag=LSA_09180
NC_015978.1	Protein Homology	CDS	893803	894480	.	-	0	ID=cds-WP_014082176.1;Parent=gene-LSA_RS04540;Dbxref=Genbank:WP_014082176.1;Name=WP_014082176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166544.1;locus_tag=LSA_RS04540;product=hypothetical protein;protein_id=WP_014082176.1;transl_table=11
NC_015978.1	RefSeq	gene	894493	895017	.	-	.	ID=gene-LSA_RS04545;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=LSA_RS04545;old_locus_tag=LSA_09190
NC_015978.1	Protein Homology	CDS	894493	895017	.	-	0	ID=cds-WP_014082177.1;Parent=gene-LSA_RS04545;Dbxref=Genbank:WP_014082177.1;Name=WP_014082177.1;Ontology_term=GO:0008360,GO:0003674;gbkey=CDS;gene=mreD;go_function=molecular_function|0003674||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166543.1;locus_tag=LSA_RS04545;product=rod shape-determining protein MreD;protein_id=WP_014082177.1;transl_table=11
NC_015978.1	RefSeq	gene	895035	895880	.	-	.	ID=gene-LSA_RS04550;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=LSA_RS04550;old_locus_tag=LSA_09200
NC_015978.1	Protein Homology	CDS	895035	895880	.	-	0	ID=cds-WP_014082178.1;Parent=gene-LSA_RS04550;Dbxref=Genbank:WP_014082178.1;Name=WP_014082178.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166542.1;locus_tag=LSA_RS04550;product=rod shape-determining protein MreC;protein_id=WP_014082178.1;transl_table=11
NC_015978.1	RefSeq	gene	895939	896952	.	-	.	ID=gene-LSA_RS04555;Name=LSA_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04555;old_locus_tag=LSA_09210
NC_015978.1	Protein Homology	CDS	895939	896952	.	-	0	ID=cds-WP_180993642.1;Parent=gene-LSA_RS04555;Dbxref=Genbank:WP_180993642.1;Name=WP_180993642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003641487.1;locus_tag=LSA_RS04555;product=rod shape-determining protein;protein_id=WP_180993642.1;transl_table=11
NC_015978.1	RefSeq	gene	897047	898357	.	-	.	ID=gene-LSA_RS04560;Name=LSA_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04560;old_locus_tag=LSA_09220
NC_015978.1	Protein Homology	CDS	897047	898357	.	-	0	ID=cds-WP_014082180.1;Parent=gene-LSA_RS04560;Dbxref=Genbank:WP_014082180.1;Name=WP_014082180.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01499.1;locus_tag=LSA_RS04560;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=WP_014082180.1;transl_table=11
NC_015978.1	RefSeq	gene	898410	901076	.	-	.	ID=gene-LSA_RS04565;Name=LSA_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04565;old_locus_tag=LSA_09230
NC_015978.1	Protein Homology	CDS	898410	901076	.	-	0	ID=cds-WP_014082181.1;Parent=gene-LSA_RS04565;Dbxref=Genbank:WP_014082181.1;Name=WP_014082181.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021977.1;locus_tag=LSA_RS04565;product=valine--tRNA ligase;protein_id=WP_014082181.1;transl_table=11
NC_015978.1	cmsearch	binding_site	901121	901330	.	-	.	ID=id-NC_015978.1:901121..901330;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1
NC_015978.1	RefSeq	gene	901384	902607	.	-	.	ID=gene-LSA_RS04570;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=LSA_RS04570;old_locus_tag=LSA_09240
NC_015978.1	Protein Homology	CDS	901384	902607	.	-	0	ID=cds-WP_014082182.1;Parent=gene-LSA_RS04570;Dbxref=Genbank:WP_014082182.1;Name=WP_014082182.1;Ontology_term=GO:0006400,GO:0009228,GO:0003824;gbkey=CDS;gene=thiI;go_function=catalytic activity|0003824||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011668124.1;locus_tag=LSA_RS04570;product=tRNA 4-thiouridine(8) synthase ThiI;protein_id=WP_014082182.1;transl_table=11
NC_015978.1	RefSeq	gene	902641	903786	.	-	.	ID=gene-LSA_RS04575;Name=LSA_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04575;old_locus_tag=LSA_09250
NC_015978.1	Protein Homology	CDS	902641	903786	.	-	0	ID=cds-WP_014082183.1;Parent=gene-LSA_RS04575;Dbxref=Genbank:WP_014082183.1;Name=WP_014082183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008858009.1;locus_tag=LSA_RS04575;product=cysteine desulfurase;protein_id=WP_014082183.1;transl_table=11
NC_015978.1	RefSeq	gene	903845	905560	.	-	.	ID=gene-LSA_RS04580;Name=ezrA;gbkey=Gene;gene=ezrA;gene_biotype=protein_coding;locus_tag=LSA_RS04580;old_locus_tag=LSA_09260
NC_015978.1	Protein Homology	CDS	903845	905560	.	-	0	ID=cds-WP_081462413.1;Parent=gene-LSA_RS04580;Dbxref=Genbank:WP_081462413.1;Name=WP_081462413.1;gbkey=CDS;gene=ezrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021972.1;locus_tag=LSA_RS04580;product=septation ring formation regulator EzrA;protein_id=WP_081462413.1;transl_table=11
NC_015978.1	RefSeq	gene	905869	906474	.	+	.	ID=gene-LSA_RS04585;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=LSA_RS04585;old_locus_tag=LSA_09270
NC_015978.1	Protein Homology	CDS	905869	906474	.	+	0	ID=cds-WP_041817859.1;Parent=gene-LSA_RS04585;Dbxref=Genbank:WP_041817859.1;Name=WP_041817859.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011668128.1;locus_tag=LSA_RS04585;product=30S ribosomal protein S4;protein_id=WP_041817859.1;transl_table=11
NC_015978.1	RefSeq	gene	906575	907027	.	+	.	ID=gene-LSA_RS04590;Name=LSA_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04590;old_locus_tag=LSA_09280
NC_015978.1	Protein Homology	CDS	906575	907027	.	+	0	ID=cds-WP_014082186.1;Parent=gene-LSA_RS04590;Dbxref=Genbank:WP_014082186.1;Name=WP_014082186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166533.1;locus_tag=LSA_RS04590;product=YueI family protein;protein_id=WP_014082186.1;transl_table=11
NC_015978.1	RefSeq	gene	907039	908322	.	+	.	ID=gene-LSA_RS04595;Name=LSA_RS04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04595;old_locus_tag=LSA_09290
NC_015978.1	Protein Homology	CDS	907039	908322	.	+	0	ID=cds-WP_014082187.1;Parent=gene-LSA_RS04595;Dbxref=Genbank:WP_014082187.1;Name=WP_014082187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003641463.1;locus_tag=LSA_RS04595;product=replication-associated recombination protein A;protein_id=WP_014082187.1;transl_table=11
NC_015978.1	RefSeq	gene	908312	908596	.	+	.	ID=gene-LSA_RS04600;Name=LSA_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04600;old_locus_tag=LSA_09300
NC_015978.1	Protein Homology	CDS	908312	908596	.	+	0	ID=cds-WP_014082188.1;Parent=gene-LSA_RS04600;Dbxref=Genbank:WP_014082188.1;Name=WP_014082188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166531.1;locus_tag=LSA_RS04600;product=hypothetical protein;protein_id=WP_014082188.1;transl_table=11
NC_015978.1	RefSeq	gene	908655	909143	.	+	.	ID=gene-LSA_RS04605;Name=LSA_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04605;old_locus_tag=LSA_09310
NC_015978.1	Protein Homology	CDS	908655	909143	.	+	0	ID=cds-WP_041817861.1;Parent=gene-LSA_RS04605;Dbxref=Genbank:WP_041817861.1;Name=WP_041817861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021967.1;locus_tag=LSA_RS04605;product=universal stress protein;protein_id=WP_041817861.1;transl_table=11
NC_015978.1	RefSeq	gene	909136	910011	.	-	.	ID=gene-LSA_RS04610;Name=LSA_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04610;old_locus_tag=LSA_09320
NC_015978.1	GeneMarkS-2+	CDS	909136	910011	.	-	0	ID=cds-WP_014082190.1;Parent=gene-LSA_RS04610;Dbxref=Genbank:WP_014082190.1;Name=WP_014082190.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS04610;product=helix-turn-helix domain-containing protein;protein_id=WP_014082190.1;transl_table=11
NC_015978.1	RefSeq	gene	910212	911354	.	-	.	ID=gene-LSA_RS04615;Name=LSA_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04615;old_locus_tag=LSA_09330
NC_015978.1	Protein Homology	CDS	910212	911354	.	-	0	ID=cds-WP_014082191.1;Parent=gene-LSA_RS04615;Dbxref=Genbank:WP_014082191.1;Name=WP_014082191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021963.1;locus_tag=LSA_RS04615;product=D-alanine--D-alanine ligase;protein_id=WP_014082191.1;transl_table=11
NC_015978.1	RefSeq	gene	911446	912642	.	-	.	ID=gene-LSA_RS04620;Name=LSA_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04620;old_locus_tag=LSA_09340
NC_015978.1	Protein Homology	CDS	911446	912642	.	-	0	ID=cds-WP_014082192.1;Parent=gene-LSA_RS04620;Dbxref=Genbank:WP_014082192.1;Name=WP_014082192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166527.1;locus_tag=LSA_RS04620;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=WP_014082192.1;transl_table=11
NC_015978.1	RefSeq	gene	912680	913165	.	-	.	ID=gene-LSA_RS07450;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=LSA_RS07450;old_locus_tag=LSA_09350
NC_015978.1	Protein Homology	CDS	912680	913165	.	-	0	ID=cds-WP_081462414.1;Parent=gene-LSA_RS07450;Dbxref=Genbank:WP_081462414.1;Name=WP_081462414.1;gbkey=CDS;gene=yidD;inference=COORDINATES: protein motif:HMM:NF022632.2;locus_tag=LSA_RS07450;product=membrane protein insertion efficiency factor YidD;protein_id=WP_081462414.1;transl_table=11
NC_015978.1	RefSeq	gene	913174	914205	.	-	.	ID=gene-LSA_RS04630;Name=LSA_RS04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04630;old_locus_tag=LSA_09360
NC_015978.1	Protein Homology	CDS	913174	914205	.	-	0	ID=cds-WP_041817863.1;Parent=gene-LSA_RS04630;Dbxref=Genbank:WP_041817863.1;Name=WP_041817863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166524.1;locus_tag=LSA_RS04630;product=rod shape-determining protein;protein_id=WP_041817863.1;transl_table=11
NC_015978.1	RefSeq	gene	914279	915541	.	-	.	ID=gene-LSA_RS04635;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=LSA_RS04635;old_locus_tag=LSA_09370
NC_015978.1	Protein Homology	CDS	914279	915541	.	-	0	ID=cds-WP_014082195.1;Parent=gene-LSA_RS04635;Dbxref=Genbank:WP_014082195.1;Name=WP_014082195.1;Ontology_term=GO:0009252,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003559926.1;locus_tag=LSA_RS04635;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_014082195.1;transl_table=11
NC_015978.1	RefSeq	gene	915560	915787	.	-	.	ID=gene-LSA_RS04640;Name=LSA_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04640;old_locus_tag=LSA_09380
NC_015978.1	Protein Homology	CDS	915560	915787	.	-	0	ID=cds-WP_014082196.1;Parent=gene-LSA_RS04640;Dbxref=Genbank:WP_014082196.1;Name=WP_014082196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166522.1;locus_tag=LSA_RS04640;product=DUF1146 family protein;protein_id=WP_014082196.1;transl_table=11
NC_015978.1	RefSeq	gene	915963	916385	.	-	.	ID=gene-LSA_RS04645;Name=LSA_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04645;old_locus_tag=LSA_09390
NC_015978.1	Protein Homology	CDS	915963	916385	.	-	0	ID=cds-WP_014082197.1;Parent=gene-LSA_RS04645;Dbxref=Genbank:WP_014082197.1;Name=WP_014082197.1;Ontology_term=GO:0015986,GO:0046933,GO:0045261;gbkey=CDS;go_component=proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011673609.1;locus_tag=LSA_RS04645;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_014082197.1;transl_table=11
NC_015978.1	RefSeq	gene	916398	917810	.	-	.	ID=gene-LSA_RS04650;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=LSA_RS04650;old_locus_tag=LSA_09400
NC_015978.1	Protein Homology	CDS	916398	917810	.	-	0	ID=cds-WP_014082198.1;Parent=gene-LSA_RS04650;Dbxref=Genbank:WP_014082198.1;Name=WP_014082198.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpD;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166520.1;locus_tag=LSA_RS04650;product=F0F1 ATP synthase subunit beta;protein_id=WP_014082198.1;transl_table=11
NC_015978.1	RefSeq	gene	917831	918745	.	-	.	ID=gene-LSA_RS04655;Name=LSA_RS04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04655;old_locus_tag=LSA_09410
NC_015978.1	Protein Homology	CDS	917831	918745	.	-	0	ID=cds-WP_014082199.1;Parent=gene-LSA_RS04655;Dbxref=Genbank:WP_014082199.1;Name=WP_014082199.1;Ontology_term=GO:0015986,GO:0046933,GO:0045261;gbkey=CDS;go_component=proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020280477.1;locus_tag=LSA_RS04655;product=F0F1 ATP synthase subunit gamma;protein_id=WP_014082199.1;transl_table=11
NC_015978.1	RefSeq	gene	918766	920292	.	-	.	ID=gene-LSA_RS04660;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=LSA_RS04660;old_locus_tag=LSA_09420
NC_015978.1	Protein Homology	CDS	918766	920292	.	-	0	ID=cds-WP_014082200.1;Parent=gene-LSA_RS04660;Dbxref=Genbank:WP_014082200.1;Name=WP_014082200.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpA;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008858075.1;locus_tag=LSA_RS04660;product=F0F1 ATP synthase subunit alpha;protein_id=WP_014082200.1;transl_table=11
NC_015978.1	RefSeq	gene	920324	920869	.	-	.	ID=gene-LSA_RS04665;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=LSA_RS04665;old_locus_tag=LSA_09430
NC_015978.1	Protein Homology	CDS	920324	920869	.	-	0	ID=cds-WP_014082201.1;Parent=gene-LSA_RS04665;Dbxref=Genbank:WP_014082201.1;Name=WP_014082201.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpH;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021951.1;locus_tag=LSA_RS04665;product=ATP synthase F1 subunit delta;protein_id=WP_014082201.1;transl_table=11
NC_015978.1	RefSeq	gene	920856	921371	.	-	.	ID=gene-LSA_RS04670;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=LSA_RS04670;old_locus_tag=LSA_09440
NC_015978.1	Protein Homology	CDS	920856	921371	.	-	0	ID=cds-WP_014082202.1;Parent=gene-LSA_RS04670;Dbxref=Genbank:WP_014082202.1;Name=WP_014082202.1;Ontology_term=GO:0015986,GO:0046933,GO:0000276,GO:0045263,GO:0045264;gbkey=CDS;gene=atpF;go_component=mitochondrial proton-transporting ATP synthase complex%2C coupling factor F(o)|0000276||IEA,proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA,plasma membrane proton-transporting ATP synthase complex%2C coupling factor F(o)|0045264||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166516.1;locus_tag=LSA_RS04670;product=F0F1 ATP synthase subunit B;protein_id=WP_014082202.1;transl_table=11
NC_015978.1	RefSeq	gene	921410	921622	.	-	.	ID=gene-LSA_RS04675;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=LSA_RS04675;old_locus_tag=LSA_09450
NC_015978.1	Protein Homology	CDS	921410	921622	.	-	0	ID=cds-WP_014082203.1;Parent=gene-LSA_RS04675;Dbxref=Genbank:WP_014082203.1;Name=WP_014082203.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003639224.1;locus_tag=LSA_RS04675;product=F0F1 ATP synthase subunit C;protein_id=WP_014082203.1;transl_table=11
NC_015978.1	RefSeq	gene	921642	922352	.	-	.	ID=gene-LSA_RS04680;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=LSA_RS04680;old_locus_tag=LSA_09460
NC_015978.1	Protein Homology	CDS	921642	922352	.	-	0	ID=cds-WP_014082204.1;Parent=gene-LSA_RS04680;Dbxref=Genbank:WP_014082204.1;Name=WP_014082204.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpB;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166514.1;locus_tag=LSA_RS04680;product=F0F1 ATP synthase subunit A;protein_id=WP_014082204.1;transl_table=11
NC_015978.1	RefSeq	gene	922572	923198	.	-	.	ID=gene-LSA_RS04685;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=LSA_RS04685;old_locus_tag=LSA_09470
NC_015978.1	Protein Homology	CDS	922572	923198	.	-	0	ID=cds-WP_014082205.1;Parent=gene-LSA_RS04685;Dbxref=Genbank:WP_014082205.1;Name=WP_014082205.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014073779.1;locus_tag=LSA_RS04685;product=uracil phosphoribosyltransferase;protein_id=WP_014082205.1;transl_table=11
NC_015978.1	RefSeq	gene	923247	924488	.	-	.	ID=gene-LSA_RS04690;Name=LSA_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04690;old_locus_tag=LSA_09480
NC_015978.1	Protein Homology	CDS	923247	924488	.	-	0	ID=cds-WP_014082206.1;Parent=gene-LSA_RS04690;Dbxref=Genbank:WP_014082206.1;Name=WP_014082206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013727674.1;locus_tag=LSA_RS04690;product=serine hydroxymethyltransferase;protein_id=WP_014082206.1;transl_table=11
NC_015978.1	RefSeq	gene	924546	925565	.	-	.	ID=gene-LSA_RS04695;Name=LSA_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04695;old_locus_tag=LSA_09490
NC_015978.1	Protein Homology	CDS	924546	925565	.	-	0	ID=cds-WP_014082207.1;Parent=gene-LSA_RS04695;Dbxref=Genbank:WP_014082207.1;Name=WP_014082207.1;Ontology_term=GO:0006400,GO:0061710;gbkey=CDS;go_function=L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166511.1;locus_tag=LSA_RS04695;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_014082207.1;transl_table=11
NC_015978.1	RefSeq	gene	925555	926430	.	-	.	ID=gene-LSA_RS04700;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=LSA_RS04700;old_locus_tag=LSA_09500
NC_015978.1	Protein Homology	CDS	925555	926430	.	-	0	ID=cds-WP_014082208.1;Parent=gene-LSA_RS04700;Dbxref=Genbank:WP_014082208.1;Name=WP_014082208.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021940.1;locus_tag=LSA_RS04700;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_014082208.1;transl_table=11
NC_015978.1	RefSeq	gene	926414	927502	.	-	.	ID=gene-LSA_RS04705;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=LSA_RS04705;old_locus_tag=LSA_09510
NC_015978.1	Protein Homology	CDS	926414	927502	.	-	0	ID=cds-WP_041818112.1;Parent=gene-LSA_RS04705;Dbxref=Genbank:WP_041818112.1;Name=WP_041818112.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021939.1;locus_tag=LSA_RS04705;product=peptide chain release factor 1;protein_id=WP_041818112.1;transl_table=11
NC_015978.1	RefSeq	gene	927538	928122	.	-	.	ID=gene-LSA_RS04710;Name=LSA_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04710;old_locus_tag=LSA_09520
NC_015978.1	Protein Homology	CDS	927538	928122	.	-	0	ID=cds-WP_014082210.1;Parent=gene-LSA_RS04710;Dbxref=Genbank:WP_014082210.1;Name=WP_014082210.1;Ontology_term=GO:0004797;gbkey=CDS;go_function=thymidine kinase activity|0004797||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008215015.1;locus_tag=LSA_RS04710;product=thymidine kinase;protein_id=WP_014082210.1;transl_table=11
NC_015978.1	RefSeq	gene	928309	929661	.	+	.	ID=gene-LSA_RS04715;Name=LSA_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04715;old_locus_tag=LSA_09530
NC_015978.1	Protein Homology	CDS	928309	929661	.	+	0	ID=cds-WP_014082211.1;Parent=gene-LSA_RS04715;Dbxref=Genbank:WP_014082211.1;Name=WP_014082211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014939810.1;locus_tag=LSA_RS04715;product=Mur ligase family protein;protein_id=WP_014082211.1;transl_table=11
NC_015978.1	RefSeq	gene	929661	930365	.	+	.	ID=gene-LSA_RS04720;Name=LSA_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04720;old_locus_tag=LSA_09540
NC_015978.1	Protein Homology	CDS	929661	930365	.	+	0	ID=cds-WP_014082212.1;Parent=gene-LSA_RS04720;Dbxref=Genbank:WP_014082212.1;Name=WP_014082212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166506.1;locus_tag=LSA_RS04720;product=DJ-1/PfpI family protein;protein_id=WP_014082212.1;transl_table=11
NC_015978.1	RefSeq	gene	930565	930654	.	-	.	ID=gene-LSA_RS04725;Name=LSA_RS04725;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS04725;old_locus_tag=LSA_R00460
NC_015978.1	tRNAscan-SE	tRNA	930565	930654	.	-	.	ID=rna-LSA_RS04725;Parent=gene-LSA_RS04725;anticodon=(pos:complement(930620..930622));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS04725;product=tRNA-Ser
NC_015978.1	tRNAscan-SE	exon	930565	930654	.	-	.	ID=exon-LSA_RS04725-1;Parent=rna-LSA_RS04725;anticodon=(pos:complement(930620..930622));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS04725;product=tRNA-Ser
NC_015978.1	RefSeq	gene	930691	931209	.	-	.	ID=gene-LSA_RS04730;Name=LSA_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04730;old_locus_tag=LSA_09550
NC_015978.1	Protein Homology	CDS	930691	931209	.	-	0	ID=cds-WP_041817865.1;Parent=gene-LSA_RS04730;Dbxref=Genbank:WP_041817865.1;Name=WP_041817865.1;Ontology_term=GO:0006168,GO:0009116,GO:0003999;gbkey=CDS;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA,nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002833433.1;locus_tag=LSA_RS04730;product=adenine phosphoribosyltransferase;protein_id=WP_041817865.1;transl_table=11
NC_015978.1	RefSeq	gene	931226	933544	.	-	.	ID=gene-LSA_RS04735;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=LSA_RS04735;old_locus_tag=LSA_09560
NC_015978.1	Protein Homology	CDS	931226	933544	.	-	0	ID=cds-WP_014082214.1;Parent=gene-LSA_RS04735;Dbxref=Genbank:WP_014082214.1;Name=WP_014082214.1;Ontology_term=GO:0006310,GO:0008297;gbkey=CDS;gene=recJ;go_function=single-stranded DNA exodeoxyribonuclease activity|0008297||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021278.1;locus_tag=LSA_RS04735;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_014082214.1;transl_table=11
NC_015978.1	RefSeq	gene	933565	933915	.	-	.	ID=gene-LSA_RS04740;Name=LSA_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04740;old_locus_tag=LSA_09570
NC_015978.1	Protein Homology	CDS	933565	933915	.	-	0	ID=cds-WP_014082215.1;Parent=gene-LSA_RS04740;Dbxref=Genbank:WP_014082215.1;Name=WP_014082215.1;Ontology_term=GO:0005887;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167125.1;locus_tag=LSA_RS04740;product=lipopolysaccharide assembly protein LapA domain-containing protein;protein_id=WP_014082215.1;transl_table=11
NC_015978.1	RefSeq	gene	933918	934856	.	-	.	ID=gene-LSA_RS04745;Name=rnz;gbkey=Gene;gene=rnz;gene_biotype=protein_coding;locus_tag=LSA_RS04745;old_locus_tag=LSA_09580
NC_015978.1	Protein Homology	CDS	933918	934856	.	-	0	ID=cds-WP_014082216.1;Parent=gene-LSA_RS04745;Dbxref=Genbank:WP_014082216.1;Name=WP_014082216.1;Ontology_term=GO:0042779,GO:0016891;gbkey=CDS;gene=rnz;go_function=endoribonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=tRNA 3'-trailer cleavage|0042779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021274.1;locus_tag=LSA_RS04745;product=ribonuclease Z;protein_id=WP_014082216.1;transl_table=11
NC_015978.1	RefSeq	gene	935285	936595	.	-	.	ID=gene-LSA_RS04755;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=LSA_RS04755;old_locus_tag=LSA_09600
NC_015978.1	Protein Homology	CDS	935285	936595	.	-	0	ID=cds-WP_014082218.1;Parent=gene-LSA_RS04755;Dbxref=Genbank:WP_014082218.1;Name=WP_014082218.1;Ontology_term=GO:0003924;gbkey=CDS;gene=obgE;go_function=GTPase activity|0003924||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000469293.1;locus_tag=LSA_RS04755;product=GTPase ObgE;protein_id=WP_014082218.1;transl_table=11
NC_015978.1	RefSeq	gene	936611	938419	.	-	.	ID=gene-LSA_RS04760;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=LSA_RS04760;old_locus_tag=LSA_09610
NC_015978.1	Protein Homology	CDS	936611	938419	.	-	0	ID=cds-WP_041817867.1;Parent=gene-LSA_RS04760;Dbxref=Genbank:WP_041817867.1;Name=WP_041817867.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010620039.1;locus_tag=LSA_RS04760;product=excinuclease ABC subunit UvrC;protein_id=WP_041817867.1;transl_table=11
NC_015978.1	RefSeq	gene	938537	938713	.	+	.	ID=gene-LSA_RS07760;Name=LSA_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07760;old_locus_tag=LSA_09620
NC_015978.1	Protein Homology	CDS	938537	938713	.	+	0	ID=cds-WP_014082220.1;Parent=gene-LSA_RS07760;Dbxref=Genbank:WP_014082220.1;Name=WP_014082220.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040897.1;locus_tag=LSA_RS07760;product=SPJ_0845 family protein;protein_id=WP_014082220.1;transl_table=11
NC_015978.1	RefSeq	gene	938750	939337	.	-	.	ID=gene-LSA_RS04765;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=LSA_RS04765;old_locus_tag=LSA_09630
NC_015978.1	Protein Homology	CDS	938750	939337	.	-	0	ID=cds-WP_014082221.1;Parent=gene-LSA_RS04765;Dbxref=Genbank:WP_014082221.1;Name=WP_014082221.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021267.1;locus_tag=LSA_RS04765;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_014082221.1;transl_table=11
NC_015978.1	RefSeq	gene	939359	940651	.	-	.	ID=gene-LSA_RS04770;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=LSA_RS04770;old_locus_tag=LSA_09640
NC_015978.1	Protein Homology	CDS	939359	940651	.	-	0	ID=cds-WP_041817869.1;Parent=gene-LSA_RS04770;Dbxref=Genbank:WP_041817869.1;Name=WP_041817869.1;Ontology_term=GO:0005524,GO:0008270,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016510989.1;locus_tag=LSA_RS04770;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_041817869.1;transl_table=11
NC_015978.1	RefSeq	gene	940800	942107	.	-	.	ID=gene-LSA_RS04775;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=LSA_RS04775;old_locus_tag=LSA_09650
NC_015978.1	Protein Homology	CDS	940800	942107	.	-	0	ID=cds-WP_014082223.1;Parent=gene-LSA_RS04775;Dbxref=Genbank:WP_014082223.1;Name=WP_014082223.1;Ontology_term=GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process='de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021265.1;locus_tag=LSA_RS04775;product=trigger factor;protein_id=WP_014082223.1;transl_table=11
NC_015978.1	RefSeq	gene	942259	943446	.	-	.	ID=gene-LSA_RS04780;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=LSA_RS04780;old_locus_tag=LSA_09660
NC_015978.1	Protein Homology	CDS	942259	943446	.	-	0	ID=cds-WP_014082224.1;Parent=gene-LSA_RS04780;Dbxref=Genbank:WP_014082224.1;Name=WP_014082224.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003640798.1;locus_tag=LSA_RS04780;product=elongation factor Tu;protein_id=WP_014082224.1;transl_table=11
NC_015978.1	RefSeq	gene	943615	944517	.	-	.	ID=gene-LSA_RS04785;Name=LSA_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04785;old_locus_tag=LSA_09670
NC_015978.1	GeneMarkS-2+	CDS	943615	944517	.	-	0	ID=cds-WP_014082225.1;Parent=gene-LSA_RS04785;Dbxref=Genbank:WP_014082225.1;Name=WP_014082225.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS04785;product=hypothetical protein;protein_id=WP_014082225.1;transl_table=11
NC_015978.1	RefSeq	gene	944572	946278	.	-	.	ID=gene-LSA_RS04790;Name=LSA_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04790;old_locus_tag=LSA_09680
NC_015978.1	Protein Homology	CDS	944572	946278	.	-	0	ID=cds-WP_014082226.1;Parent=gene-LSA_RS04790;Dbxref=Genbank:WP_014082226.1;Name=WP_014082226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003555266.1;locus_tag=LSA_RS04790;product=ribonuclease J;protein_id=WP_014082226.1;transl_table=11
NC_015978.1	RefSeq	gene	946436	946705	.	-	.	ID=gene-LSA_RS04795;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=LSA_RS04795;old_locus_tag=LSA_09690
NC_015978.1	Protein Homology	CDS	946436	946705	.	-	0	ID=cds-WP_014082227.1;Parent=gene-LSA_RS04795;Dbxref=Genbank:WP_014082227.1;Name=WP_014082227.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsO;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002833449.1;locus_tag=LSA_RS04795;product=30S ribosomal protein S15;protein_id=WP_014082227.1;transl_table=11
NC_015978.1	RefSeq	gene	946924	947184	.	+	.	ID=gene-LSA_RS04800;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=LSA_RS04800;old_locus_tag=LSA_09700
NC_015978.1	Protein Homology	CDS	946924	947184	.	+	0	ID=cds-WP_041818113.1;Parent=gene-LSA_RS04800;Dbxref=Genbank:WP_041818113.1;Name=WP_041818113.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsT;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167139.1;locus_tag=LSA_RS04800;product=30S ribosomal protein S20;protein_id=WP_041818113.1;transl_table=11
NC_015978.1	RefSeq	gene	947200	948228	.	-	.	ID=gene-LSA_RS04805;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=LSA_RS04805;old_locus_tag=LSA_09710
NC_015978.1	Protein Homology	CDS	947200	948228	.	-	0	ID=cds-WP_014082229.1;Parent=gene-LSA_RS04805;Dbxref=Genbank:WP_014082229.1;Name=WP_014082229.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=holA;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167140.1;locus_tag=LSA_RS04805;product=DNA polymerase III subunit delta;protein_id=WP_014082229.1;transl_table=11
NC_015978.1	RefSeq	gene	948215	950353	.	-	.	ID=gene-LSA_RS04810;Name=LSA_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04810;old_locus_tag=LSA_09720
NC_015978.1	Protein Homology	CDS	948215	950353	.	-	0	ID=cds-WP_103434626.1;Parent=gene-LSA_RS04810;Dbxref=Genbank:WP_103434626.1;Name=WP_103434626.1;Ontology_term=GO:0009290,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=DNA import into cell involved in transformation|0009290||IEA;inference=COORDINATES: protein motif:HMM:TIGR00361.1;locus_tag=LSA_RS04810;product=DNA internalization-related competence protein ComEC/Rec2;protein_id=WP_103434626.1;transl_table=11
NC_015978.1	RefSeq	gene	950473	950958	.	-	.	ID=gene-LSA_RS04815;Name=LSA_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04815;old_locus_tag=LSA_09730
NC_015978.1	Protein Homology	CDS	950473	950958	.	-	0	ID=cds-WP_014082231.1;Parent=gene-LSA_RS04815;Dbxref=Genbank:WP_014082231.1;Name=WP_014082231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021253.1;locus_tag=LSA_RS04815;product=ComE operon protein 2;protein_id=WP_014082231.1;transl_table=11
NC_015978.1	RefSeq	gene	951009	951692	.	-	.	ID=gene-LSA_RS04820;Name=LSA_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04820;old_locus_tag=LSA_09740
NC_015978.1	Protein Homology	CDS	951009	951692	.	-	0	ID=cds-WP_049777613.1;Parent=gene-LSA_RS04820;Dbxref=Genbank:WP_049777613.1;Name=WP_049777613.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00426.1;locus_tag=LSA_RS04820;product=helix-hairpin-helix domain-containing protein;protein_id=WP_049777613.1;transl_table=11
NC_015978.1	RefSeq	gene	951776	952102	.	-	.	ID=gene-LSA_RS04825;Name=LSA_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04825;old_locus_tag=LSA_09750
NC_015978.1	GeneMarkS-2+	CDS	951776	952102	.	-	0	ID=cds-WP_014082233.1;Parent=gene-LSA_RS04825;Dbxref=Genbank:WP_014082233.1;Name=WP_014082233.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS04825;product=hypothetical protein;protein_id=WP_014082233.1;transl_table=11
NC_015978.1	RefSeq	gene	952143	952412	.	-	.	ID=gene-LSA_RS04830;Name=LSA_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04830;old_locus_tag=LSA_09760
NC_015978.1	Protein Homology	CDS	952143	952412	.	-	0	ID=cds-WP_014082234.1;Parent=gene-LSA_RS04830;Dbxref=Genbank:WP_014082234.1;Name=WP_014082234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022482.1;locus_tag=LSA_RS04830;product=N-acetyltransferase;protein_id=WP_014082234.1;transl_table=11
NC_015978.1	RefSeq	gene	952518	952832	.	-	.	ID=gene-LSA_RS04835;Name=LSA_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04835;old_locus_tag=LSA_09770
NC_015978.1	GeneMarkS-2+	CDS	952518	952832	.	-	0	ID=cds-WP_014082235.1;Parent=gene-LSA_RS04835;Dbxref=Genbank:WP_014082235.1;Name=WP_014082235.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS04835;product=hypothetical protein;protein_id=WP_014082235.1;transl_table=11
NC_015978.1	RefSeq	gene	953020	953340	.	+	.	ID=gene-LSA_RS04840;Name=LSA_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04840;old_locus_tag=LSA_09780
NC_015978.1	GeneMarkS-2+	CDS	953020	953340	.	+	0	ID=cds-WP_041817871.1;Parent=gene-LSA_RS04840;Dbxref=Genbank:WP_041817871.1;Name=WP_041817871.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS04840;product=hypothetical protein;protein_id=WP_041817871.1;transl_table=11
NC_015978.1	RefSeq	gene	953403	953894	.	-	.	ID=gene-LSA_RS04845;Name=LSA_RS04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04845;old_locus_tag=LSA_09790
NC_015978.1	Protein Homology	CDS	953403	953894	.	-	0	ID=cds-WP_014082236.1;Parent=gene-LSA_RS04845;Dbxref=Genbank:WP_014082236.1;Name=WP_014082236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020089366.1;locus_tag=LSA_RS04845;product=glutathione peroxidase;protein_id=WP_014082236.1;transl_table=11
NC_015978.1	RefSeq	gene	953988	955037	.	-	.	ID=gene-LSA_RS04850;Name=LSA_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04850;old_locus_tag=LSA_09800
NC_015978.1	Protein Homology	CDS	953988	955037	.	-	0	ID=cds-WP_041817872.1;Parent=gene-LSA_RS04850;Dbxref=Genbank:WP_041817872.1;Name=WP_041817872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167144.1;locus_tag=LSA_RS04850;product=PDZ domain-containing protein;protein_id=WP_041817872.1;transl_table=11
NC_015978.1	RefSeq	gene	955012	955512	.	-	.	ID=gene-LSA_RS04855;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=LSA_RS04855;old_locus_tag=LSA_09810
NC_015978.1	Protein Homology	CDS	955012	955512	.	-	0	ID=cds-WP_014082238.1;Parent=gene-LSA_RS04855;Dbxref=Genbank:WP_014082238.1;Name=WP_014082238.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167145.1;locus_tag=LSA_RS04855;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_014082238.1;transl_table=11
NC_015978.1	RefSeq	gene	955522	956076	.	-	.	ID=gene-LSA_RS04860;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=LSA_RS04860;old_locus_tag=LSA_09820
NC_015978.1	Protein Homology	CDS	955522	956076	.	-	0	ID=cds-WP_041817874.1;Parent=gene-LSA_RS04860;Dbxref=Genbank:WP_041817874.1;Name=WP_041817874.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004048925.1;locus_tag=LSA_RS04860;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=WP_041817874.1;transl_table=11
NC_015978.1	RefSeq	gene	956079	956342	.	-	.	ID=gene-LSA_RS04865;Name=LSA_RS04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04865;old_locus_tag=LSA_09830
NC_015978.1	Protein Homology	CDS	956079	956342	.	-	0	ID=cds-WP_014082240.1;Parent=gene-LSA_RS04865;Dbxref=Genbank:WP_014082240.1;Name=WP_014082240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021247.1;locus_tag=LSA_RS04865;product=YlbG family protein;protein_id=WP_014082240.1;transl_table=11
NC_015978.1	RefSeq	gene	956357	957520	.	-	.	ID=gene-LSA_RS04870;Name=LSA_RS04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04870;old_locus_tag=LSA_09840
NC_015978.1	Protein Homology	CDS	956357	957520	.	-	0	ID=cds-WP_041817875.1;Parent=gene-LSA_RS04870;Dbxref=Genbank:WP_041817875.1;Name=WP_041817875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020088768.1;locus_tag=LSA_RS04870;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=WP_041817875.1;transl_table=11
NC_015978.1	RefSeq	gene	957624	959465	.	-	.	ID=gene-LSA_RS04875;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=LSA_RS04875;old_locus_tag=LSA_09850
NC_015978.1	Protein Homology	CDS	957624	959465	.	-	0	ID=cds-WP_041817876.1;Parent=gene-LSA_RS04875;Dbxref=Genbank:WP_041817876.1;Name=WP_041817876.1;Ontology_term=GO:0006412,GO:0006950,GO:0005525;gbkey=CDS;gene=typA;go_function=GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167149.1;locus_tag=LSA_RS04875;product=translational GTPase TypA;protein_id=WP_041817876.1;transl_table=11
NC_015978.1	RefSeq	gene	959670	959966	.	-	.	ID=gene-LSA_RS04880;Name=LSA_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04880;old_locus_tag=LSA_09860
NC_015978.1	Protein Homology	CDS	959670	959966	.	-	0	ID=cds-WP_014082243.1;Parent=gene-LSA_RS04880;Dbxref=Genbank:WP_014082243.1;Name=WP_014082243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021238.1;locus_tag=LSA_RS04880;product=UPF0223 family protein;protein_id=WP_014082243.1;transl_table=11
NC_015978.1	RefSeq	gene	959950	960810	.	-	.	ID=gene-LSA_RS04885;Name=LSA_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04885;old_locus_tag=LSA_09870
NC_015978.1	Protein Homology	CDS	959950	960810	.	-	0	ID=cds-WP_225361773.1;Parent=gene-LSA_RS04885;Dbxref=Genbank:WP_225361773.1;Name=WP_225361773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021237.1;locus_tag=LSA_RS04885;product=lactate dehydrogenase;protein_id=WP_225361773.1;transl_table=11
NC_015978.1	RefSeq	gene	961047	961607	.	+	.	ID=gene-LSA_RS04890;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=LSA_RS04890;old_locus_tag=LSA_09880
NC_015978.1	Protein Homology	CDS	961047	961607	.	+	0	ID=cds-WP_014082245.1;Parent=gene-LSA_RS04890;Dbxref=Genbank:WP_014082245.1;Name=WP_014082245.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021236.1;locus_tag=LSA_RS04890;product=peptide deformylase;protein_id=WP_014082245.1;transl_table=11
NC_015978.1	RefSeq	gene	961636	962097	.	-	.	ID=gene-LSA_RS04895;Name=LSA_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04895;old_locus_tag=LSA_09890
NC_015978.1	GeneMarkS-2+	CDS	961636	962097	.	-	0	ID=cds-WP_014082246.1;Parent=gene-LSA_RS04895;Dbxref=Genbank:WP_014082246.1;Name=WP_014082246.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS04895;product=hypothetical protein;protein_id=WP_014082246.1;transl_table=11
NC_015978.1	RefSeq	gene	962275	962490	.	+	.	ID=gene-LSA_RS04900;Name=LSA_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04900;old_locus_tag=LSA_09900
NC_015978.1	Protein Homology	CDS	962275	962490	.	+	0	ID=cds-WP_014082247.1;Parent=gene-LSA_RS04900;Dbxref=Genbank:WP_014082247.1;Name=WP_014082247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021232.1;locus_tag=LSA_RS04900;product=DNA-directed RNA polymerase subunit epsilon;protein_id=WP_014082247.1;transl_table=11
NC_015978.1	RefSeq	gene	962493	964181	.	+	.	ID=gene-LSA_RS04905;Name=LSA_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04905;old_locus_tag=LSA_09910
NC_015978.1	Protein Homology	CDS	962493	964181	.	+	0	ID=cds-WP_014082248.1;Parent=gene-LSA_RS04905;Dbxref=Genbank:WP_014082248.1;Name=WP_014082248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020281886.1;locus_tag=LSA_RS04905;product=ribonuclease J;protein_id=WP_014082248.1;transl_table=11
NC_015978.1	RefSeq	gene	964271	965266	.	-	.	ID=gene-LSA_RS04910;Name=LSA_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04910;old_locus_tag=LSA_09920
NC_015978.1	Protein Homology	CDS	964271	965266	.	-	0	ID=cds-WP_014082249.1;Parent=gene-LSA_RS04910;Dbxref=Genbank:WP_014082249.1;Name=WP_014082249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021230.1;locus_tag=LSA_RS04910;product=aldo/keto reductase;protein_id=WP_014082249.1;transl_table=11
NC_015978.1	RefSeq	gene	965279	966229	.	-	.	ID=gene-LSA_RS04915;Name=LSA_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04915;old_locus_tag=LSA_09930
NC_015978.1	Protein Homology	CDS	965279	966229	.	-	0	ID=cds-WP_014082250.1;Parent=gene-LSA_RS04915;Dbxref=Genbank:WP_014082250.1;Name=WP_014082250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008855513.1;locus_tag=LSA_RS04915;product=ribose-phosphate pyrophosphokinase;protein_id=WP_014082250.1;transl_table=11
NC_015978.1	RefSeq	gene	966279	968732	.	-	.	ID=gene-LSA_RS04920;Name=LSA_RS04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04920;old_locus_tag=LSA_09940
NC_015978.1	Protein Homology	CDS	966279	968732	.	-	0	ID=cds-WP_041818119.1;Parent=gene-LSA_RS04920;Dbxref=Genbank:WP_041818119.1;Name=WP_041818119.1;Ontology_term=GO:0004386;gbkey=CDS;go_function=helicase activity|0004386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021226.1;locus_tag=LSA_RS04920;product=ATP-dependent RecD-like DNA helicase;protein_id=WP_041818119.1;transl_table=11
NC_015978.1	RefSeq	gene	968754	969425	.	-	.	ID=gene-LSA_RS04925;Name=LSA_RS04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04925;old_locus_tag=LSA_09950
NC_015978.1	Protein Homology	CDS	968754	969425	.	-	0	ID=cds-WP_014082252.1;Parent=gene-LSA_RS04925;Dbxref=Genbank:WP_014082252.1;Name=WP_014082252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167157.1;locus_tag=LSA_RS04925;product=tetratricopeptide repeat protein;protein_id=WP_014082252.1;transl_table=11
NC_015978.1	RefSeq	gene	969436	970092	.	-	.	ID=gene-LSA_RS04930;Name=LSA_RS04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04930;old_locus_tag=LSA_09960
NC_015978.1	Protein Homology	CDS	969436	970092	.	-	0	ID=cds-WP_041817878.1;Parent=gene-LSA_RS04930;Dbxref=Genbank:WP_041817878.1;Name=WP_041817878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021224.1;locus_tag=LSA_RS04930;product=histidine phosphatase family protein;protein_id=WP_041817878.1;transl_table=11
NC_015978.1	RefSeq	gene	970182	971306	.	-	.	ID=gene-LSA_RS04935;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=LSA_RS04935;old_locus_tag=LSA_09970
NC_015978.1	Protein Homology	CDS	970182	971306	.	-	0	ID=cds-WP_041817879.1;Parent=gene-LSA_RS04935;Dbxref=Genbank:WP_041817879.1;Name=WP_041817879.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002833477.1;locus_tag=LSA_RS04935;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_041817879.1;transl_table=11
NC_015978.1	RefSeq	gene	971452	971796	.	-	.	ID=gene-LSA_RS04940;Name=LSA_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04940;old_locus_tag=LSA_09980
NC_015978.1	Protein Homology	CDS	971452	971796	.	-	0	ID=cds-WP_041817881.1;Parent=gene-LSA_RS04940;Dbxref=Genbank:WP_041817881.1;Name=WP_041817881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021222.1;locus_tag=LSA_RS04940;product=hypothetical protein;protein_id=WP_041817881.1;transl_table=11
NC_015978.1	RefSeq	gene	971796	972956	.	-	.	ID=gene-LSA_RS04945;Name=LSA_RS04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04945;old_locus_tag=LSA_09990
NC_015978.1	Protein Homology	CDS	971796	972956	.	-	0	ID=cds-WP_014082256.1;Parent=gene-LSA_RS04945;Dbxref=Genbank:WP_014082256.1;Name=WP_014082256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010620103.1;locus_tag=LSA_RS04945;product=cysteine desulfurase;protein_id=WP_014082256.1;transl_table=11
NC_015978.1	RefSeq	gene	972971	973660	.	-	.	ID=gene-LSA_RS04950;Name=LSA_RS04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04950;old_locus_tag=LSA_10000
NC_015978.1	Protein Homology	CDS	972971	973660	.	-	0	ID=cds-WP_103428417.1;Parent=gene-LSA_RS04950;Dbxref=Genbank:WP_103428417.1;Name=WP_103428417.1;Ontology_term=GO:0009116,GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside metabolic process|0009116||IEA,nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021219.1;locus_tag=LSA_RS04950;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;protein_id=WP_103428417.1;transl_table=11
NC_015978.1	RefSeq	gene	973678	973947	.	-	.	ID=gene-LSA_RS04955;Name=LSA_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04955;old_locus_tag=LSA_10010
NC_015978.1	Protein Homology	CDS	973678	973947	.	-	0	ID=cds-WP_014082258.1;Parent=gene-LSA_RS04955;Dbxref=Genbank:WP_014082258.1;Name=WP_014082258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020088801.1;locus_tag=LSA_RS04955;product=hypothetical protein;protein_id=WP_014082258.1;transl_table=11
NC_015978.1	RefSeq	gene	973957	974502	.	-	.	ID=gene-LSA_RS04960;Name=LSA_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04960;old_locus_tag=LSA_10020
NC_015978.1	Protein Homology	CDS	973957	974502	.	-	0	ID=cds-WP_041817882.1;Parent=gene-LSA_RS04960;Dbxref=Genbank:WP_041817882.1;Name=WP_041817882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013727523.1;locus_tag=LSA_RS04960;product=NUDIX hydrolase;protein_id=WP_041817882.1;transl_table=11
NC_015978.1	RefSeq	gene	974541	974741	.	-	.	ID=gene-LSA_RS04965;Name=LSA_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04965;old_locus_tag=LSA_10030
NC_015978.1	Protein Homology	CDS	974541	974741	.	-	0	ID=cds-WP_014082260.1;Parent=gene-LSA_RS04965;Dbxref=Genbank:WP_014082260.1;Name=WP_014082260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021215.1;locus_tag=LSA_RS04965;product=cold shock domain-containing protein;protein_id=WP_014082260.1;transl_table=11
NC_015978.1	RefSeq	gene	974796	977597	.	-	.	ID=gene-LSA_RS04970;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=LSA_RS04970;old_locus_tag=LSA_10040
NC_015978.1	Protein Homology	CDS	974796	977597	.	-	0	ID=cds-WP_041817885.1;Parent=gene-LSA_RS04970;Dbxref=Genbank:WP_041817885.1;Name=WP_041817885.1;Ontology_term=GO:0006428,GO:0004822,GO:0005737;gbkey=CDS;gene=ileS;go_component=cytoplasm|0005737||IEA;go_function=isoleucine-tRNA ligase activity|0004822||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167166.1;locus_tag=LSA_RS04970;product=isoleucine--tRNA ligase;protein_id=WP_041817885.1;transl_table=11
NC_015978.1	RefSeq	gene	977798	978469	.	-	.	ID=gene-LSA_RS04975;Name=LSA_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04975;old_locus_tag=LSA_10050
NC_015978.1	Protein Homology	CDS	977798	978469	.	-	0	ID=cds-WP_014082262.1;Parent=gene-LSA_RS04975;Dbxref=Genbank:WP_014082262.1;Name=WP_014082262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167168.1;locus_tag=LSA_RS04975;product=DivIVA domain-containing protein;protein_id=WP_014082262.1;transl_table=11
NC_015978.1	RefSeq	gene	978482	979273	.	-	.	ID=gene-LSA_RS04980;Name=LSA_RS04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04980;old_locus_tag=LSA_10060
NC_015978.1	Protein Homology	CDS	978482	979273	.	-	0	ID=cds-WP_014082263.1;Parent=gene-LSA_RS04980;Dbxref=Genbank:WP_014082263.1;Name=WP_014082263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021209.1;locus_tag=LSA_RS04980;product=YlmH/Sll1252 family protein;protein_id=WP_014082263.1;transl_table=11
NC_015978.1	RefSeq	gene	979273	979554	.	-	.	ID=gene-LSA_RS04985;Name=LSA_RS04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS04985;old_locus_tag=LSA_10070
NC_015978.1	Protein Homology	CDS	979273	979554	.	-	0	ID=cds-WP_014082264.1;Parent=gene-LSA_RS04985;Dbxref=Genbank:WP_014082264.1;Name=WP_014082264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167170.1;locus_tag=LSA_RS04985;product=YggT family protein;protein_id=WP_014082264.1;transl_table=11
NC_015978.1	RefSeq	gene	979538	979969	.	-	.	ID=gene-LSA_RS04990;Name=sepF;gbkey=Gene;gene=sepF;gene_biotype=protein_coding;locus_tag=LSA_RS04990;old_locus_tag=LSA_10080
NC_015978.1	Protein Homology	CDS	979538	979969	.	-	0	ID=cds-WP_041817886.1;Parent=gene-LSA_RS04990;Dbxref=Genbank:WP_041817886.1;Name=WP_041817886.1;Ontology_term=GO:0090529;gbkey=CDS;gene=sepF;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167171.1;locus_tag=LSA_RS04990;product=cell division protein SepF;protein_id=WP_041817886.1;transl_table=11
NC_015978.1	RefSeq	gene	979985	981187	.	-	.	ID=gene-LSA_RS04995;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=LSA_RS04995;old_locus_tag=LSA_10090
NC_015978.1	Protein Homology	CDS	979985	981187	.	-	0	ID=cds-WP_014082266.1;Parent=gene-LSA_RS04995;Dbxref=Genbank:WP_014082266.1;Name=WP_014082266.1;Ontology_term=GO:0000910,GO:0003924;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004270698.1;locus_tag=LSA_RS04995;product=cell division protein FtsZ;protein_id=WP_014082266.1;transl_table=11
NC_015978.1	RefSeq	gene	981204	982568	.	-	.	ID=gene-LSA_RS05000;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=LSA_RS05000;old_locus_tag=LSA_10100
NC_015978.1	Protein Homology	CDS	981204	982568	.	-	0	ID=cds-WP_014082267.1;Parent=gene-LSA_RS05000;Dbxref=Genbank:WP_014082267.1;Name=WP_014082267.1;Ontology_term=GO:0043093,GO:0005515,GO:0005524;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167173.1;locus_tag=LSA_RS05000;product=cell division protein FtsA;protein_id=WP_014082267.1;transl_table=11
NC_015978.1	RefSeq	gene	982660	983475	.	-	.	ID=gene-LSA_RS05005;Name=LSA_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05005;old_locus_tag=LSA_10110
NC_015978.1	Protein Homology	CDS	982660	983475	.	-	0	ID=cds-WP_014082268.1;Parent=gene-LSA_RS05005;Dbxref=Genbank:WP_014082268.1;Name=WP_014082268.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015739.2;locus_tag=LSA_RS05005;product=cell division protein FtsQ/DivIB;protein_id=WP_014082268.1;transl_table=11
NC_015978.1	RefSeq	gene	983488	984594	.	-	.	ID=gene-LSA_RS05010;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=LSA_RS05010;old_locus_tag=LSA_10120
NC_015978.1	Protein Homology	CDS	983488	984594	.	-	0	ID=cds-WP_014082269.1;Parent=gene-LSA_RS05010;Dbxref=Genbank:WP_014082269.1;Name=WP_014082269.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167175.1;locus_tag=LSA_RS05010;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_014082269.1;transl_table=11
NC_015978.1	RefSeq	gene	984597	985970	.	-	.	ID=gene-LSA_RS05015;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=LSA_RS05015;old_locus_tag=LSA_10130
NC_015978.1	Protein Homology	CDS	984597	985970	.	-	0	ID=cds-WP_014082270.1;Parent=gene-LSA_RS05015;Dbxref=Genbank:WP_014082270.1;Name=WP_014082270.1;Ontology_term=GO:0009252,GO:0008764;gbkey=CDS;gene=murD;go_function=UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167176.1;locus_tag=LSA_RS05015;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_014082270.1;transl_table=11
NC_015978.1	RefSeq	gene	985990	986943	.	-	.	ID=gene-LSA_RS05020;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=LSA_RS05020;old_locus_tag=LSA_10140
NC_015978.1	Protein Homology	CDS	985990	986943	.	-	0	ID=cds-WP_014082271.1;Parent=gene-LSA_RS05020;Dbxref=Genbank:WP_014082271.1;Name=WP_014082271.1;Ontology_term=GO:0009252,GO:0008963;gbkey=CDS;gene=mraY;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021199.1;locus_tag=LSA_RS05020;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_014082271.1;transl_table=11
NC_015978.1	RefSeq	gene	986971	989124	.	-	.	ID=gene-LSA_RS05025;Name=LSA_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05025;old_locus_tag=LSA_10150
NC_015978.1	Protein Homology	CDS	986971	989124	.	-	0	ID=cds-WP_014082272.1;Parent=gene-LSA_RS05025;Dbxref=Genbank:WP_014082272.1;Name=WP_014082272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167177.1;locus_tag=LSA_RS05025;product=penicillin-binding protein;protein_id=WP_014082272.1;transl_table=11
NC_015978.1	RefSeq	gene	989121	989492	.	-	.	ID=gene-LSA_RS05030;Name=LSA_RS05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05030;old_locus_tag=LSA_10160
NC_015978.1	GeneMarkS-2+	CDS	989121	989492	.	-	0	ID=cds-WP_014082273.1;Parent=gene-LSA_RS05030;Dbxref=Genbank:WP_014082273.1;Name=WP_014082273.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS05030;product=hypothetical protein;protein_id=WP_014082273.1;transl_table=11
NC_015978.1	RefSeq	gene	989506	990450	.	-	.	ID=gene-LSA_RS05035;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=LSA_RS05035;old_locus_tag=LSA_10170
NC_015978.1	Protein Homology	CDS	989506	990450	.	-	0	ID=cds-WP_014082274.1;Parent=gene-LSA_RS05035;Dbxref=Genbank:WP_014082274.1;Name=WP_014082274.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021194.1;locus_tag=LSA_RS05035;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_014082274.1;transl_table=11
NC_015978.1	RefSeq	gene	990466	990891	.	-	.	ID=gene-LSA_RS05040;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=LSA_RS05040;old_locus_tag=LSA_10180
NC_015978.1	Protein Homology	CDS	990466	990891	.	-	0	ID=cds-WP_014082275.1;Parent=gene-LSA_RS05040;Dbxref=Genbank:WP_014082275.1;Name=WP_014082275.1;Ontology_term=GO:0051302,GO:0043565;gbkey=CDS;gene=mraZ;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of cell division|0051302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014939616.1;locus_tag=LSA_RS05040;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_014082275.1;transl_table=11
NC_015978.1	RefSeq	gene	991036	991425	.	-	.	ID=gene-LSA_RS05045;Name=LSA_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05045;old_locus_tag=LSA_10190
NC_015978.1	Protein Homology	CDS	991036	991425	.	-	0	ID=cds-WP_014082276.1;Parent=gene-LSA_RS05045;Dbxref=Genbank:WP_014082276.1;Name=WP_014082276.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023305.2;locus_tag=LSA_RS05045;product=DUF3397 family protein;protein_id=WP_014082276.1;transl_table=11
NC_015978.1	RefSeq	gene	991510	991644	.	+	.	ID=gene-LSA_RS07455;Name=LSA_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07455;old_locus_tag=LSA_10200
NC_015978.1	Protein Homology	CDS	991510	991644	.	+	0	ID=cds-WP_225361439.1;Parent=gene-LSA_RS07455;Dbxref=Genbank:WP_225361439.1;Name=WP_225361439.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024650.2;locus_tag=LSA_RS07455;product=DUF4044 domain-containing protein;protein_id=WP_225361439.1;transl_table=11
NC_015978.1	RefSeq	gene	991681	993990	.	-	.	ID=gene-LSA_RS05050;Name=LSA_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05050;old_locus_tag=LSA_10210
NC_015978.1	Protein Homology	CDS	991681	993990	.	-	0	ID=cds-WP_041817888.1;Parent=gene-LSA_RS05050;Dbxref=Genbank:WP_041817888.1;Name=WP_041817888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020281838.1;locus_tag=LSA_RS05050;product=DNA translocase FtsK;protein_id=WP_041817888.1;transl_table=11
NC_015978.1	RefSeq	gene	994002	994526	.	-	.	ID=gene-LSA_RS05055;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=LSA_RS05055;old_locus_tag=LSA_10220
NC_015978.1	Protein Homology	CDS	994002	994526	.	-	0	ID=cds-WP_014082279.1;Parent=gene-LSA_RS05055;Dbxref=Genbank:WP_014082279.1;Name=WP_014082279.1;Ontology_term=GO:0006400,GO:0008175;gbkey=CDS;gene=trmL;go_function=tRNA methyltransferase activity|0008175||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167184.1;locus_tag=LSA_RS05055;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_014082279.1;transl_table=11
NC_015978.1	RefSeq	gene	994657	995238	.	+	.	ID=gene-LSA_RS05060;Name=LSA_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05060;old_locus_tag=LSA_10230
NC_015978.1	Protein Homology	CDS	994657	995238	.	+	0	ID=cds-WP_049777614.1;Parent=gene-LSA_RS05060;Dbxref=Genbank:WP_049777614.1;Name=WP_049777614.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015866.2;locus_tag=LSA_RS05060;product=hypothetical protein;protein_id=WP_049777614.1;transl_table=11
NC_015978.1	RefSeq	gene	995269	996156	.	-	.	ID=gene-LSA_RS05065;Name=LSA_RS05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05065;old_locus_tag=LSA_10240
NC_015978.1	Protein Homology	CDS	995269	996156	.	-	0	ID=cds-WP_014082280.1;Parent=gene-LSA_RS05065;Dbxref=Genbank:WP_014082280.1;Name=WP_014082280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167185.1;locus_tag=LSA_RS05065;product=RluA family pseudouridine synthase;protein_id=WP_014082280.1;transl_table=11
NC_015978.1	RefSeq	gene	996149	996958	.	-	.	ID=gene-LSA_RS05070;Name=LSA_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05070;old_locus_tag=LSA_10250
NC_015978.1	Protein Homology	CDS	996149	996958	.	-	0	ID=cds-WP_041817890.1;Parent=gene-LSA_RS05070;Dbxref=Genbank:WP_041817890.1;Name=WP_041817890.1;Ontology_term=GO:0006741,GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;go_process=NADP biosynthetic process|0006741||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020281834.1;locus_tag=LSA_RS05070;product=NAD kinase;protein_id=WP_041817890.1;transl_table=11
NC_015978.1	RefSeq	gene	996933	997580	.	-	.	ID=gene-LSA_RS05075;Name=LSA_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05075;old_locus_tag=LSA_10260
NC_015978.1	Protein Homology	CDS	996933	997580	.	-	0	ID=cds-WP_014082282.1;Parent=gene-LSA_RS05075;Dbxref=Genbank:WP_014082282.1;Name=WP_014082282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021179.1;locus_tag=LSA_RS05075;product=GTP pyrophosphokinase family protein;protein_id=WP_014082282.1;transl_table=11
NC_015978.1	RefSeq	gene	997744	998313	.	+	.	ID=gene-LSA_RS05080;Name=LSA_RS05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05080;old_locus_tag=LSA_10270
NC_015978.1	Protein Homology	CDS	997744	998313	.	+	0	ID=cds-WP_014082283.1;Parent=gene-LSA_RS05080;Dbxref=Genbank:WP_014082283.1;Name=WP_014082283.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025119.2;locus_tag=LSA_RS05080;product=DsbA family protein;protein_id=WP_014082283.1;transl_table=11
NC_015978.1	RefSeq	gene	998401	1000200	.	-	.	ID=gene-LSA_RS05085;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=LSA_RS05085;old_locus_tag=LSA_10280
NC_015978.1	Protein Homology	CDS	998401	1000200	.	-	0	ID=cds-WP_041817892.1;Parent=gene-LSA_RS05085;Dbxref=Genbank:WP_041817892.1;Name=WP_041817892.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=pepF;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015380549.1;locus_tag=LSA_RS05085;product=oligoendopeptidase F;protein_id=WP_041817892.1;transl_table=11
NC_015978.1	RefSeq	gene	1000190	1001257	.	-	.	ID=gene-LSA_RS07275;Name=LSA_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07275;old_locus_tag=LSA_10290
NC_015978.1	Protein Homology	CDS	1000190	1001257	.	-	0	ID=cds-WP_014082285.1;Parent=gene-LSA_RS07275;Dbxref=Genbank:WP_014082285.1;Name=WP_014082285.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017832.2;locus_tag=LSA_RS07275;product=competence protein CoiA family protein;protein_id=WP_014082285.1;transl_table=11
NC_015978.1	RefSeq	gene	1001306	1002001	.	-	.	ID=gene-LSA_RS07280;Name=LSA_RS07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07280;old_locus_tag=LSA_10300
NC_015978.1	Protein Homology	CDS	1001306	1002001	.	-	0	ID=cds-WP_014082286.1;Parent=gene-LSA_RS07280;Dbxref=Genbank:WP_014082286.1;Name=WP_014082286.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017226.2;locus_tag=LSA_RS07280;product=adaptor protein MecA;protein_id=WP_014082286.1;transl_table=11
NC_015978.1	RefSeq	gene	1002013	1002756	.	-	.	ID=gene-LSA_RS05100;Name=LSA_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05100;old_locus_tag=LSA_10310
NC_015978.1	Protein Homology	CDS	1002013	1002756	.	-	0	ID=cds-WP_014082287.1;Parent=gene-LSA_RS05100;Dbxref=Genbank:WP_014082287.1;Name=WP_014082287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011673556.1;locus_tag=LSA_RS05100;product=MBL fold metallo-hydrolase;protein_id=WP_014082287.1;transl_table=11
NC_015978.1	RefSeq	gene	1002844	1003344	.	+	.	ID=gene-LSA_RS05105;Name=LSA_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05105;old_locus_tag=LSA_10320
NC_015978.1	GeneMarkS-2+	CDS	1002844	1003344	.	+	0	ID=cds-WP_014082288.1;Parent=gene-LSA_RS05105;Dbxref=Genbank:WP_014082288.1;Name=WP_014082288.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS05105;product=hypothetical protein;protein_id=WP_014082288.1;transl_table=11
NC_015978.1	RefSeq	gene	1003500	1003574	.	-	.	ID=gene-LSA_RS05110;Name=LSA_RS05110;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS05110;old_locus_tag=LSA_R00470
NC_015978.1	tRNAscan-SE	tRNA	1003500	1003574	.	-	.	ID=rna-LSA_RS05110;Parent=gene-LSA_RS05110;anticodon=(pos:complement(1003537..1003539));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05110;product=tRNA-Asp
NC_015978.1	tRNAscan-SE	exon	1003500	1003574	.	-	.	ID=exon-LSA_RS05110-1;Parent=rna-LSA_RS05110;anticodon=(pos:complement(1003537..1003539));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05110;product=tRNA-Asp
NC_015978.1	RefSeq	gene	1003579	1003652	.	-	.	ID=gene-LSA_RS05115;Name=LSA_RS05115;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS05115;old_locus_tag=LSA_R00480
NC_015978.1	tRNAscan-SE	tRNA	1003579	1003652	.	-	.	ID=rna-LSA_RS05115;Parent=gene-LSA_RS05115;anticodon=(pos:complement(1003616..1003618));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05115;product=tRNA-Met
NC_015978.1	tRNAscan-SE	exon	1003579	1003652	.	-	.	ID=exon-LSA_RS05115-1;Parent=rna-LSA_RS05115;anticodon=(pos:complement(1003616..1003618));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05115;product=tRNA-Met
NC_015978.1	RefSeq	gene	1003672	1003743	.	-	.	ID=gene-LSA_RS05120;Name=LSA_RS05120;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS05120;old_locus_tag=LSA_R00490
NC_015978.1	tRNAscan-SE	tRNA	1003672	1003743	.	-	.	ID=rna-LSA_RS05120;Parent=gene-LSA_RS05120;anticodon=(pos:complement(1003708..1003710));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05120;product=tRNA-Glu
NC_015978.1	tRNAscan-SE	exon	1003672	1003743	.	-	.	ID=exon-LSA_RS05120-1;Parent=rna-LSA_RS05120;anticodon=(pos:complement(1003708..1003710));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05120;product=tRNA-Glu
NC_015978.1	RefSeq	gene	1003769	1003856	.	-	.	ID=gene-LSA_RS05125;Name=LSA_RS05125;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS05125;old_locus_tag=LSA_R00500
NC_015978.1	tRNAscan-SE	tRNA	1003769	1003856	.	-	.	ID=rna-LSA_RS05125;Parent=gene-LSA_RS05125;anticodon=(pos:complement(1003820..1003822));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05125;product=tRNA-Ser
NC_015978.1	tRNAscan-SE	exon	1003769	1003856	.	-	.	ID=exon-LSA_RS05125-1;Parent=rna-LSA_RS05125;anticodon=(pos:complement(1003820..1003822));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05125;product=tRNA-Ser
NC_015978.1	RefSeq	gene	1003863	1003937	.	-	.	ID=gene-LSA_RS05130;Name=LSA_RS05130;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS05130;old_locus_tag=LSA_R00510
NC_015978.1	tRNAscan-SE	tRNA	1003863	1003937	.	-	.	ID=rna-LSA_RS05130;Parent=gene-LSA_RS05130;anticodon=(pos:complement(1003900..1003902));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05130;product=tRNA-Ile
NC_015978.1	tRNAscan-SE	exon	1003863	1003937	.	-	.	ID=exon-LSA_RS05130-1;Parent=rna-LSA_RS05130;anticodon=(pos:complement(1003900..1003902));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05130;product=tRNA-Ile
NC_015978.1	RefSeq	gene	1003943	1004013	.	-	.	ID=gene-LSA_RS05135;Name=LSA_RS05135;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS05135;old_locus_tag=LSA_R00520
NC_015978.1	tRNAscan-SE	tRNA	1003943	1004013	.	-	.	ID=rna-LSA_RS05135;Parent=gene-LSA_RS05135;anticodon=(pos:complement(1003979..1003981));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05135;product=tRNA-Gly
NC_015978.1	tRNAscan-SE	exon	1003943	1004013	.	-	.	ID=exon-LSA_RS05135-1;Parent=rna-LSA_RS05135;anticodon=(pos:complement(1003979..1003981));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05135;product=tRNA-Gly
NC_015978.1	RefSeq	gene	1004044	1004116	.	-	.	ID=gene-LSA_RS05140;Name=LSA_RS05140;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS05140;old_locus_tag=LSA_R00530
NC_015978.1	tRNAscan-SE	tRNA	1004044	1004116	.	-	.	ID=rna-LSA_RS05140;Parent=gene-LSA_RS05140;anticodon=(pos:complement(1004081..1004083));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05140;product=tRNA-Phe
NC_015978.1	tRNAscan-SE	exon	1004044	1004116	.	-	.	ID=exon-LSA_RS05140-1;Parent=rna-LSA_RS05140;anticodon=(pos:complement(1004081..1004083));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05140;product=tRNA-Phe
NC_015978.1	RefSeq	gene	1004126	1004200	.	-	.	ID=gene-LSA_RS05145;Name=LSA_RS05145;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS05145;old_locus_tag=LSA_R00540
NC_015978.1	tRNAscan-SE	tRNA	1004126	1004200	.	-	.	ID=rna-LSA_RS05145;Parent=gene-LSA_RS05145;anticodon=(pos:complement(1004163..1004165));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05145;product=tRNA-Asp
NC_015978.1	tRNAscan-SE	exon	1004126	1004200	.	-	.	ID=exon-LSA_RS05145-1;Parent=rna-LSA_RS05145;anticodon=(pos:complement(1004163..1004165));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05145;product=tRNA-Asp
NC_015978.1	RefSeq	gene	1004205	1004278	.	-	.	ID=gene-LSA_RS05150;Name=LSA_RS05150;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS05150;old_locus_tag=LSA_R00550
NC_015978.1	tRNAscan-SE	tRNA	1004205	1004278	.	-	.	ID=rna-LSA_RS05150;Parent=gene-LSA_RS05150;anticodon=(pos:complement(1004242..1004244));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05150;product=tRNA-Met
NC_015978.1	tRNAscan-SE	exon	1004205	1004278	.	-	.	ID=exon-LSA_RS05150-1;Parent=rna-LSA_RS05150;anticodon=(pos:complement(1004242..1004244));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05150;product=tRNA-Met
NC_015978.1	RefSeq	gene	1004286	1004375	.	-	.	ID=gene-LSA_RS05155;Name=LSA_RS05155;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS05155;old_locus_tag=LSA_R00560
NC_015978.1	tRNAscan-SE	tRNA	1004286	1004375	.	-	.	ID=rna-LSA_RS05155;Parent=gene-LSA_RS05155;anticodon=(pos:complement(1004337..1004339));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05155;product=tRNA-Ser
NC_015978.1	tRNAscan-SE	exon	1004286	1004375	.	-	.	ID=exon-LSA_RS05155-1;Parent=rna-LSA_RS05155;anticodon=(pos:complement(1004337..1004339));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05155;product=tRNA-Ser
NC_015978.1	RefSeq	gene	1004447	1004521	.	-	.	ID=gene-LSA_RS05160;Name=LSA_RS05160;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS05160;old_locus_tag=LSA_R00570
NC_015978.1	tRNAscan-SE	tRNA	1004447	1004521	.	-	.	ID=rna-LSA_RS05160;Parent=gene-LSA_RS05160;anticodon=(pos:complement(1004484..1004486));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05160;product=tRNA-Ile
NC_015978.1	tRNAscan-SE	exon	1004447	1004521	.	-	.	ID=exon-LSA_RS05160-1;Parent=rna-LSA_RS05160;anticodon=(pos:complement(1004484..1004486));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05160;product=tRNA-Ile
NC_015978.1	RefSeq	gene	1004532	1004605	.	-	.	ID=gene-LSA_RS05165;Name=LSA_RS05165;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS05165;old_locus_tag=LSA_R00580
NC_015978.1	tRNAscan-SE	tRNA	1004532	1004605	.	-	.	ID=rna-LSA_RS05165;Parent=gene-LSA_RS05165;anticodon=(pos:complement(1004569..1004571));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05165;product=tRNA-Met
NC_015978.1	tRNAscan-SE	exon	1004532	1004605	.	-	.	ID=exon-LSA_RS05165-1;Parent=rna-LSA_RS05165;anticodon=(pos:complement(1004569..1004571));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05165;product=tRNA-Met
NC_015978.1	RefSeq	gene	1004637	1004710	.	-	.	ID=gene-LSA_RS05170;Name=LSA_RS05170;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS05170;old_locus_tag=LSA_R00590
NC_015978.1	tRNAscan-SE	tRNA	1004637	1004710	.	-	.	ID=rna-LSA_RS05170;Parent=gene-LSA_RS05170;anticodon=(pos:complement(1004674..1004676));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05170;product=tRNA-Pro
NC_015978.1	tRNAscan-SE	exon	1004637	1004710	.	-	.	ID=exon-LSA_RS05170-1;Parent=rna-LSA_RS05170;anticodon=(pos:complement(1004674..1004676));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05170;product=tRNA-Pro
NC_015978.1	RefSeq	gene	1004716	1004789	.	-	.	ID=gene-LSA_RS05175;Name=LSA_RS05175;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS05175;old_locus_tag=LSA_R00600
NC_015978.1	tRNAscan-SE	tRNA	1004716	1004789	.	-	.	ID=rna-LSA_RS05175;Parent=gene-LSA_RS05175;anticodon=(pos:complement(1004753..1004755));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05175;product=tRNA-Arg
NC_015978.1	tRNAscan-SE	exon	1004716	1004789	.	-	.	ID=exon-LSA_RS05175-1;Parent=rna-LSA_RS05175;anticodon=(pos:complement(1004753..1004755));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05175;product=tRNA-Arg
NC_015978.1	RefSeq	gene	1004798	1004883	.	-	.	ID=gene-LSA_RS05180;Name=LSA_RS05180;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS05180;old_locus_tag=LSA_R00610
NC_015978.1	tRNAscan-SE	tRNA	1004798	1004883	.	-	.	ID=rna-LSA_RS05180;Parent=gene-LSA_RS05180;anticodon=(pos:complement(1004847..1004849));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05180;product=tRNA-Leu
NC_015978.1	tRNAscan-SE	exon	1004798	1004883	.	-	.	ID=exon-LSA_RS05180-1;Parent=rna-LSA_RS05180;anticodon=(pos:complement(1004847..1004849));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05180;product=tRNA-Leu
NC_015978.1	RefSeq	gene	1004889	1004960	.	-	.	ID=gene-LSA_RS05185;Name=LSA_RS05185;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS05185;old_locus_tag=LSA_R00620
NC_015978.1	tRNAscan-SE	tRNA	1004889	1004960	.	-	.	ID=rna-LSA_RS05185;Parent=gene-LSA_RS05185;anticodon=(pos:complement(1004926..1004928));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05185;product=tRNA-Gly
NC_015978.1	tRNAscan-SE	exon	1004889	1004960	.	-	.	ID=exon-LSA_RS05185-1;Parent=rna-LSA_RS05185;anticodon=(pos:complement(1004926..1004928));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05185;product=tRNA-Gly
NC_015978.1	RefSeq	gene	1004965	1005037	.	-	.	ID=gene-LSA_RS05190;Name=LSA_RS05190;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS05190;old_locus_tag=LSA_R00630
NC_015978.1	tRNAscan-SE	tRNA	1004965	1005037	.	-	.	ID=rna-LSA_RS05190;Parent=gene-LSA_RS05190;anticodon=(pos:complement(1005002..1005004));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05190;product=tRNA-Thr
NC_015978.1	tRNAscan-SE	exon	1004965	1005037	.	-	.	ID=exon-LSA_RS05190-1;Parent=rna-LSA_RS05190;anticodon=(pos:complement(1005002..1005004));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05190;product=tRNA-Thr
NC_015978.1	RefSeq	gene	1005069	1005141	.	-	.	ID=gene-LSA_RS05195;Name=LSA_RS05195;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS05195;old_locus_tag=LSA_R00640
NC_015978.1	tRNAscan-SE	tRNA	1005069	1005141	.	-	.	ID=rna-LSA_RS05195;Parent=gene-LSA_RS05195;anticodon=(pos:complement(1005106..1005108));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05195;product=tRNA-Lys
NC_015978.1	tRNAscan-SE	exon	1005069	1005141	.	-	.	ID=exon-LSA_RS05195-1;Parent=rna-LSA_RS05195;anticodon=(pos:complement(1005106..1005108));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05195;product=tRNA-Lys
NC_015978.1	RefSeq	gene	1005144	1005216	.	-	.	ID=gene-LSA_RS05200;Name=LSA_RS05200;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS05200;old_locus_tag=LSA_R00650
NC_015978.1	tRNAscan-SE	tRNA	1005144	1005216	.	-	.	ID=rna-LSA_RS05200;Parent=gene-LSA_RS05200;anticodon=(pos:complement(1005181..1005183));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05200;product=tRNA-Val
NC_015978.1	tRNAscan-SE	exon	1005144	1005216	.	-	.	ID=exon-LSA_RS05200-1;Parent=rna-LSA_RS05200;anticodon=(pos:complement(1005181..1005183));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05200;product=tRNA-Val
NC_015978.1	RefSeq	gene	1005224	1005340	.	-	.	ID=gene-LSA_RS05205;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LSA_RS05205;old_locus_tag=LSA_R00660
NC_015978.1	cmsearch	rRNA	1005224	1005340	.	-	.	ID=rna-LSA_RS05205;Parent=gene-LSA_RS05205;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS05205;product=5S ribosomal RNA
NC_015978.1	cmsearch	exon	1005224	1005340	.	-	.	ID=exon-LSA_RS05205-1;Parent=rna-LSA_RS05205;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS05205;product=5S ribosomal RNA
NC_015978.1	RefSeq	gene	1005422	1008337	.	-	.	ID=gene-LSA_RS05210;Name=LSA_RS05210;gbkey=Gene;gene_biotype=rRNA;locus_tag=LSA_RS05210;old_locus_tag=LSA_R00670
NC_015978.1	cmsearch	rRNA	1005422	1008337	.	-	.	ID=rna-LSA_RS05210;Parent=gene-LSA_RS05210;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS05210;product=23S ribosomal RNA
NC_015978.1	cmsearch	exon	1005422	1008337	.	-	.	ID=exon-LSA_RS05210-1;Parent=rna-LSA_RS05210;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS05210;product=23S ribosomal RNA
NC_015978.1	RefSeq	gene	1008508	1008580	.	-	.	ID=gene-LSA_RS05215;Name=LSA_RS05215;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS05215;old_locus_tag=LSA_R00680
NC_015978.1	tRNAscan-SE	tRNA	1008508	1008580	.	-	.	ID=rna-LSA_RS05215;Parent=gene-LSA_RS05215;anticodon=(pos:complement(1008545..1008547));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05215;product=tRNA-Ala
NC_015978.1	tRNAscan-SE	exon	1008508	1008580	.	-	.	ID=exon-LSA_RS05215-1;Parent=rna-LSA_RS05215;anticodon=(pos:complement(1008545..1008547));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05215;product=tRNA-Ala
NC_015978.1	RefSeq	gene	1008608	1008682	.	-	.	ID=gene-LSA_RS05220;Name=LSA_RS05220;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS05220;old_locus_tag=LSA_R00690
NC_015978.1	tRNAscan-SE	tRNA	1008608	1008682	.	-	.	ID=rna-LSA_RS05220;Parent=gene-LSA_RS05220;anticodon=(pos:complement(1008645..1008647));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05220;product=tRNA-Ile
NC_015978.1	tRNAscan-SE	exon	1008608	1008682	.	-	.	ID=exon-LSA_RS05220-1;Parent=rna-LSA_RS05220;anticodon=(pos:complement(1008645..1008647));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05220;product=tRNA-Ile
NC_015978.1	RefSeq	gene	1008778	1010355	.	-	.	ID=gene-LSA_RS05225;Name=LSA_RS05225;gbkey=Gene;gene_biotype=rRNA;locus_tag=LSA_RS05225;old_locus_tag=LSA_R00700
NC_015978.1	cmsearch	rRNA	1008778	1010355	.	-	.	ID=rna-LSA_RS05225;Parent=gene-LSA_RS05225;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS05225;product=16S ribosomal RNA
NC_015978.1	cmsearch	exon	1008778	1010355	.	-	.	ID=exon-LSA_RS05225-1;Parent=rna-LSA_RS05225;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS05225;product=16S ribosomal RNA
NC_015978.1	RefSeq	gene	1010814	1011668	.	-	.	ID=gene-LSA_RS05230;Name=LSA_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05230;old_locus_tag=LSA_10330
NC_015978.1	Protein Homology	CDS	1010814	1011668	.	-	0	ID=cds-WP_041817535.1-2;Parent=gene-LSA_RS05230;Dbxref=Genbank:WP_041817535.1;Name=WP_041817535.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033516.0;locus_tag=LSA_RS05230;product=IS3 family transposase;protein_id=WP_041817535.1;transl_table=11
NC_015978.1	RefSeq	gene	1011668	1012171	.	-	.	ID=gene-LSA_RS05235;Name=LSA_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05235;old_locus_tag=LSA_10340
NC_015978.1	Protein Homology	CDS	1011668	1012171	.	-	0	ID=cds-WP_014082290.1;Parent=gene-LSA_RS05235;Dbxref=Genbank:WP_014082290.1;Name=WP_014082290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014082299.1;locus_tag=LSA_RS05235;product=helix-turn-helix domain-containing protein;protein_id=WP_014082290.1;transl_table=11
NC_015978.1	RefSeq	gene	1012245	1014308	.	-	.	ID=gene-LSA_RS05240;Name=LSA_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05240;old_locus_tag=LSA_10350
NC_015978.1	Protein Homology	CDS	1012245	1014308	.	-	0	ID=cds-WP_041817893.1;Parent=gene-LSA_RS05240;Dbxref=Genbank:WP_041817893.1;Name=WP_041817893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003559701.1;locus_tag=LSA_RS05240;product=LTA synthase family protein;protein_id=WP_041817893.1;transl_table=11
NC_015978.1	RefSeq	gene	1014340	1015353	.	-	.	ID=gene-LSA_RS05245;Name=LSA_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05245;old_locus_tag=LSA_10360
NC_015978.1	Protein Homology	CDS	1014340	1015353	.	-	0	ID=cds-WP_014082292.1;Parent=gene-LSA_RS05245;Dbxref=Genbank:WP_014082292.1;Name=WP_014082292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003635755.1;locus_tag=LSA_RS05245;product=flippase-like domain-containing protein;protein_id=WP_014082292.1;transl_table=11
NC_015978.1	RefSeq	gene	1015337	1016392	.	-	.	ID=gene-LSA_RS05250;Name=LSA_RS05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05250;old_locus_tag=LSA_10370
NC_015978.1	Protein Homology	CDS	1015337	1016392	.	-	0	ID=cds-WP_014082293.1;Parent=gene-LSA_RS05250;Dbxref=Genbank:WP_014082293.1;Name=WP_014082293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003559697.1;locus_tag=LSA_RS05250;product=glycosyltransferase family 4 protein;protein_id=WP_014082293.1;transl_table=11
NC_015978.1	RefSeq	gene	1016396	1017571	.	-	.	ID=gene-LSA_RS05255;Name=LSA_RS05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05255;old_locus_tag=LSA_10380
NC_015978.1	Protein Homology	CDS	1016396	1017571	.	-	0	ID=cds-WP_180993644.1;Parent=gene-LSA_RS05255;Dbxref=Genbank:WP_180993644.1;Name=WP_180993644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167378.1;locus_tag=LSA_RS05255;product=glycosyltransferase family 4 protein;protein_id=WP_180993644.1;transl_table=11
NC_015978.1	RefSeq	gene	1017696	1017962	.	-	.	ID=gene-LSA_RS05260;Name=LSA_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05260;old_locus_tag=LSA_10390
NC_015978.1	Protein Homology	CDS	1017696	1017962	.	-	0	ID=cds-WP_014082295.1;Parent=gene-LSA_RS05260;Dbxref=Genbank:WP_014082295.1;Name=WP_014082295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000411080.1;locus_tag=LSA_RS05260;product=phosphocarrier protein HPr;protein_id=WP_014082295.1;transl_table=11
NC_015978.1	RefSeq	gene	1018065	1018259	.	-	.	ID=gene-LSA_RS05265;Name=LSA_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05265;old_locus_tag=LSA_10400
NC_015978.1	Protein Homology	CDS	1018065	1018259	.	-	0	ID=cds-WP_014082296.1;Parent=gene-LSA_RS05265;Dbxref=Genbank:WP_014082296.1;Name=WP_014082296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167376.1;locus_tag=LSA_RS05265;product=hypothetical protein;protein_id=WP_014082296.1;transl_table=11
NC_015978.1	RefSeq	gene	1018414	1020417	.	+	.	ID=gene-LSA_RS05270;Name=LSA_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05270;old_locus_tag=LSA_10410
NC_015978.1	Protein Homology	CDS	1018414	1020417	.	+	0	ID=cds-WP_041817896.1;Parent=gene-LSA_RS05270;Dbxref=Genbank:WP_041817896.1;Name=WP_041817896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167375.1;locus_tag=LSA_RS05270;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=WP_041817896.1;transl_table=11
NC_015978.1	RefSeq	gene	1020491	1021345	.	-	.	ID=gene-LSA_RS05275;Name=LSA_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05275;old_locus_tag=LSA_10420
NC_015978.1	Protein Homology	CDS	1020491	1021345	.	-	0	ID=cds-WP_041817898.1;Parent=gene-LSA_RS05275;Dbxref=Genbank:WP_041817898.1;Name=WP_041817898.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033516.0;locus_tag=LSA_RS05275;product=IS3 family transposase;protein_id=WP_041817898.1;transl_table=11
NC_015978.1	RefSeq	gene	1021345	1021848	.	-	.	ID=gene-LSA_RS05280;Name=LSA_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05280;old_locus_tag=LSA_10430
NC_015978.1	Protein Homology	CDS	1021345	1021848	.	-	0	ID=cds-WP_014082299.1;Parent=gene-LSA_RS05280;Dbxref=Genbank:WP_014082299.1;Name=WP_014082299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014082299.1;locus_tag=LSA_RS05280;product=helix-turn-helix domain-containing protein;protein_id=WP_014082299.1;transl_table=11
NC_015978.1	RefSeq	gene	1021956	1022777	.	+	.	ID=gene-LSA_RS05285;Name=LSA_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05285;old_locus_tag=LSA_10440
NC_015978.1	Protein Homology	CDS	1021956	1022777	.	+	0	ID=cds-WP_014082300.1;Parent=gene-LSA_RS05285;Dbxref=Genbank:WP_014082300.1;Name=WP_014082300.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018196.2;locus_tag=LSA_RS05285;product=MucBP domain-containing protein;protein_id=WP_014082300.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	1022805	1024174	.	-	.	ID=gene-LSA_RS05290;Name=argH;gbkey=Gene;gene=argH;gene_biotype=pseudogene;locus_tag=LSA_RS05290;pseudo=true
NC_015978.1	Protein Homology	CDS	1022805	1024174	.	-	0	ID=cds-LSA_RS05290;Parent=gene-LSA_RS05290;Note=frameshifted;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013727583.1;locus_tag=LSA_RS05290;product=argininosuccinate lyase;pseudo=true;transl_table=11
NC_015978.1	RefSeq	gene	1024174	1025385	.	-	.	ID=gene-LSA_RS05295;Name=LSA_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05295;old_locus_tag=LSA_10470
NC_015978.1	Protein Homology	CDS	1024174	1025385	.	-	0	ID=cds-WP_014082301.1;Parent=gene-LSA_RS05295;Dbxref=Genbank:WP_014082301.1;Name=WP_014082301.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524;gbkey=CDS;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167085.1;locus_tag=LSA_RS05295;product=argininosuccinate synthase;protein_id=WP_014082301.1;transl_table=11
NC_015978.1	RefSeq	gene	1025387	1026118	.	-	.	ID=gene-LSA_RS05300;Name=LSA_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05300;old_locus_tag=LSA_10480
NC_015978.1	Protein Homology	CDS	1025387	1026118	.	-	0	ID=cds-WP_202945049.1;Parent=gene-LSA_RS05300;Dbxref=Genbank:WP_202945049.1;Name=WP_202945049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004398740.1;locus_tag=LSA_RS05300;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_202945049.1;transl_table=11
NC_015978.1	RefSeq	gene	1026123	1027574	.	-	.	ID=gene-LSA_RS05305;Name=LSA_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05305;old_locus_tag=LSA_10490
NC_015978.1	Protein Homology	CDS	1026123	1027574	.	-	0	ID=cds-WP_041817899.1;Parent=gene-LSA_RS05305;Dbxref=Genbank:WP_041817899.1;Name=WP_041817899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008211125.1;locus_tag=LSA_RS05305;product=ABC transporter substrate-binding protein/permease;protein_id=WP_041817899.1;transl_table=11
NC_015978.1	cmsearch	binding_site	1027635	1027862	.	-	.	ID=id-NC_015978.1:1027635..1027862;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1
NC_015978.1	RefSeq	gene	1028019	1028561	.	-	.	ID=gene-LSA_RS05310;Name=LSA_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05310;old_locus_tag=LSA_10500
NC_015978.1	Protein Homology	CDS	1028019	1028561	.	-	0	ID=cds-WP_041817900.1;Parent=gene-LSA_RS05310;Dbxref=Genbank:WP_041817900.1;Name=WP_041817900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166450.1;locus_tag=LSA_RS05310;product=biotin transporter BioY;protein_id=WP_041817900.1;transl_table=11
NC_015978.1	RefSeq	gene	1028724	1030145	.	-	.	ID=gene-LSA_RS05315;Name=LSA_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05315;old_locus_tag=LSA_10510
NC_015978.1	Protein Homology	CDS	1028724	1030145	.	-	0	ID=cds-WP_041817901.1;Parent=gene-LSA_RS05315;Dbxref=Genbank:WP_041817901.1;Name=WP_041817901.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022800.1;locus_tag=LSA_RS05315;product=C69 family dipeptidase;protein_id=WP_041817901.1;transl_table=11
NC_015978.1	RefSeq	gene	1030169	1031746	.	-	.	ID=gene-LSA_RS05320;Name=LSA_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05320;old_locus_tag=LSA_10520
NC_015978.1	Protein Homology	CDS	1030169	1031746	.	-	0	ID=cds-WP_014082306.1;Parent=gene-LSA_RS05320;Dbxref=Genbank:WP_014082306.1;Name=WP_014082306.1;Ontology_term=GO:0006415,GO:0003924;gbkey=CDS;go_function=GTPase activity|0003924||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011668265.1;locus_tag=LSA_RS05320;product=peptide chain release factor 3;protein_id=WP_014082306.1;transl_table=11
NC_015978.1	RefSeq	gene	1031814	1032941	.	-	.	ID=gene-LSA_RS05325;Name=LSA_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05325;old_locus_tag=LSA_10530
NC_015978.1	Protein Homology	CDS	1031814	1032941	.	-	0	ID=cds-WP_014082307.1;Parent=gene-LSA_RS05325;Dbxref=Genbank:WP_014082307.1;Name=WP_014082307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167369.1;locus_tag=LSA_RS05325;product=AI-2E family transporter;protein_id=WP_014082307.1;transl_table=11
NC_015978.1	RefSeq	gene	1032943	1033749	.	-	.	ID=gene-LSA_RS05330;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=LSA_RS05330;old_locus_tag=LSA_10540
NC_015978.1	Protein Homology	CDS	1032943	1033749	.	-	0	ID=cds-WP_014082308.1;Parent=gene-LSA_RS05330;Dbxref=Genbank:WP_014082308.1;Name=WP_014082308.1;Ontology_term=GO:0006282;gbkey=CDS;gene=recX;go_process=regulation of DNA repair|0006282||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022791.1;locus_tag=LSA_RS05330;product=recombination regulator RecX;protein_id=WP_014082308.1;transl_table=11
NC_015978.1	RefSeq	gene	1033828	1034274	.	+	.	ID=gene-LSA_RS05335;Name=LSA_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05335;old_locus_tag=LSA_10550
NC_015978.1	Protein Homology	CDS	1033828	1034274	.	+	0	ID=cds-WP_014082309.1;Parent=gene-LSA_RS05335;Dbxref=Genbank:WP_014082309.1;Name=WP_014082309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013728422.1;locus_tag=LSA_RS05335;product=flavodoxin;protein_id=WP_014082309.1;transl_table=11
NC_015978.1	RefSeq	gene	1034293	1035156	.	-	.	ID=gene-LSA_RS05340;Name=LSA_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05340;old_locus_tag=LSA_10560
NC_015978.1	Protein Homology	CDS	1034293	1035156	.	-	0	ID=cds-WP_103434652.1;Parent=gene-LSA_RS05340;Dbxref=Genbank:WP_103434652.1;Name=WP_103434652.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00765.1;locus_tag=LSA_RS05340;product=YihY/virulence factor BrkB family protein;protein_id=WP_103434652.1;transl_table=11
NC_015978.1	RefSeq	gene	1035301	1036239	.	+	.	ID=gene-LSA_RS05345;Name=LSA_RS05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05345;old_locus_tag=LSA_10570
NC_015978.1	Protein Homology	CDS	1035301	1036239	.	+	0	ID=cds-WP_014082311.1;Parent=gene-LSA_RS05345;Dbxref=Genbank:WP_014082311.1;Name=WP_014082311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003638982.1;locus_tag=LSA_RS05345;product=glycosyltransferase family 2 protein;protein_id=WP_014082311.1;transl_table=11
NC_015978.1	RefSeq	gene	1036239	1036673	.	+	.	ID=gene-LSA_RS05350;Name=LSA_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05350;old_locus_tag=LSA_10580
NC_015978.1	Protein Homology	CDS	1036239	1036673	.	+	0	ID=cds-WP_014082312.1;Parent=gene-LSA_RS05350;Dbxref=Genbank:WP_014082312.1;Name=WP_014082312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167364.1;locus_tag=LSA_RS05350;product=GtrA family protein;protein_id=WP_014082312.1;transl_table=11
NC_015978.1	RefSeq	gene	1036751	1037254	.	+	.	ID=gene-LSA_RS05355;Name=LSA_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05355;old_locus_tag=LSA_10590
NC_015978.1	Protein Homology	CDS	1036751	1037254	.	+	0	ID=cds-WP_041817664.1-2;Parent=gene-LSA_RS05355;Dbxref=Genbank:WP_041817664.1;Name=WP_041817664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014082299.1;locus_tag=LSA_RS05355;product=helix-turn-helix domain-containing protein;protein_id=WP_041817664.1;transl_table=11
NC_015978.1	RefSeq	gene	1037254	1038108	.	+	.	ID=gene-LSA_RS05360;Name=LSA_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05360;old_locus_tag=LSA_10600
NC_015978.1	Protein Homology	CDS	1037254	1038108	.	+	0	ID=cds-WP_041817666.1-2;Parent=gene-LSA_RS05360;Dbxref=Genbank:WP_041817666.1;Name=WP_041817666.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033516.0;locus_tag=LSA_RS05360;product=IS3 family transposase;protein_id=WP_041817666.1;transl_table=11
NC_015978.1	RefSeq	gene	1038172	1038244	.	-	.	ID=gene-LSA_RS05365;Name=LSA_RS05365;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS05365;old_locus_tag=LSA_R00710
NC_015978.1	tRNAscan-SE	tRNA	1038172	1038244	.	-	.	ID=rna-LSA_RS05365;Parent=gene-LSA_RS05365;anticodon=(pos:complement(1038208..1038210));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05365;product=tRNA-Arg
NC_015978.1	tRNAscan-SE	exon	1038172	1038244	.	-	.	ID=exon-LSA_RS05365-1;Parent=rna-LSA_RS05365;anticodon=(pos:complement(1038208..1038210));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05365;product=tRNA-Arg
NC_015978.1	RefSeq	gene	1038300	1039601	.	-	.	ID=gene-LSA_RS05370;Name=LSA_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05370;old_locus_tag=LSA_10610
NC_015978.1	Protein Homology	CDS	1038300	1039601	.	-	0	ID=cds-WP_041817902.1;Parent=gene-LSA_RS05370;Dbxref=Genbank:WP_041817902.1;Name=WP_041817902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011668283.1;locus_tag=LSA_RS05370;product=DEAD/DEAH box helicase;protein_id=WP_041817902.1;transl_table=11
NC_015978.1	RefSeq	gene	1039606	1040607	.	-	.	ID=gene-LSA_RS05375;Name=LSA_RS05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05375;old_locus_tag=LSA_10620
NC_015978.1	Protein Homology	CDS	1039606	1040607	.	-	0	ID=cds-WP_014082315.1;Parent=gene-LSA_RS05375;Dbxref=Genbank:WP_014082315.1;Name=WP_014082315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008856983.1;locus_tag=LSA_RS05375;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_014082315.1;transl_table=11
NC_015978.1	RefSeq	gene	1040660	1041397	.	-	.	ID=gene-LSA_RS05380;Name=LSA_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05380;old_locus_tag=LSA_10630
NC_015978.1	Protein Homology	CDS	1040660	1041397	.	-	0	ID=cds-WP_049777615.1;Parent=gene-LSA_RS05380;Dbxref=Genbank:WP_049777615.1;Name=WP_049777615.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013357.2;locus_tag=LSA_RS05380;product=hypothetical protein;protein_id=WP_049777615.1;transl_table=11
NC_015978.1	RefSeq	gene	1041642	1043204	.	+	.	ID=gene-LSA_RS05385;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=LSA_RS05385;old_locus_tag=LSA_10640
NC_015978.1	Protein Homology	CDS	1041642	1043204	.	+	0	ID=cds-WP_014082317.1;Parent=gene-LSA_RS05385;Dbxref=Genbank:WP_014082317.1;Name=WP_014082317.1;Ontology_term=GO:0009255,GO:0019200;gbkey=CDS;gene=gntK;go_function=carbohydrate kinase activity|0019200||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020090367.1;locus_tag=LSA_RS05385;product=gluconokinase;protein_id=WP_014082317.1;transl_table=11
NC_015978.1	RefSeq	gene	1043316	1043609	.	+	.	ID=gene-LSA_RS05390;Name=LSA_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05390;old_locus_tag=LSA_10650
NC_015978.1	GeneMarkS-2+	CDS	1043316	1043609	.	+	0	ID=cds-WP_014082318.1;Parent=gene-LSA_RS05390;Dbxref=Genbank:WP_014082318.1;Name=WP_014082318.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS05390;product=hypothetical protein;protein_id=WP_014082318.1;transl_table=11
NC_015978.1	RefSeq	gene	1043670	1043972	.	-	.	ID=gene-LSA_RS05395;Name=LSA_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05395;old_locus_tag=LSA_10660
NC_015978.1	Protein Homology	CDS	1043670	1043972	.	-	0	ID=cds-WP_014082319.1;Parent=gene-LSA_RS05395;Dbxref=Genbank:WP_014082319.1;Name=WP_014082319.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010498498.1;locus_tag=LSA_RS05395;product=HigA family addiction module antitoxin;protein_id=WP_014082319.1;transl_table=11
NC_015978.1	RefSeq	gene	1043990	1044163	.	-	.	ID=gene-LSA_RS07910;Name=LSA_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07910;old_locus_tag=LSA_10670
NC_015978.1	Protein Homology	CDS	1043990	1044163	.	-	0	ID=cds-WP_225361788.1;Parent=gene-LSA_RS07910;Dbxref=Genbank:WP_225361788.1;Name=WP_225361788.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016152.2;locus_tag=LSA_RS07910;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_225361788.1;transl_table=11
NC_015978.1	RefSeq	gene	1044167	1044349	.	-	.	ID=gene-LSA_RS07915;Name=LSA_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07915;old_locus_tag=LSA_10680
NC_015978.1	GeneMarkS-2+	CDS	1044167	1044349	.	-	0	ID=cds-WP_049777616.1;Parent=gene-LSA_RS07915;Dbxref=Genbank:WP_049777616.1;Name=WP_049777616.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS07915;product=hypothetical protein;protein_id=WP_049777616.1;transl_table=11
NC_015978.1	RefSeq	gene	1044411	1044845	.	-	.	ID=gene-LSA_RS05405;Name=LSA_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05405;old_locus_tag=LSA_10690
NC_015978.1	Protein Homology	CDS	1044411	1044845	.	-	0	ID=cds-WP_014082320.1;Parent=gene-LSA_RS05405;Dbxref=Genbank:WP_014082320.1;Name=WP_014082320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003564445.1;locus_tag=LSA_RS05405;product=ACT domain-containing protein;protein_id=WP_014082320.1;transl_table=11
NC_015978.1	RefSeq	gene	1044962	1046185	.	-	.	ID=gene-LSA_RS05410;Name=LSA_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05410;old_locus_tag=LSA_10700
NC_015978.1	Protein Homology	CDS	1044962	1046185	.	-	0	ID=cds-WP_014082321.1;Parent=gene-LSA_RS05410;Dbxref=Genbank:WP_014082321.1;Name=WP_014082321.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166651.1;locus_tag=LSA_RS05410;product=ArgE/DapE family deacylase;protein_id=WP_014082321.1;transl_table=11
NC_015978.1	RefSeq	gene	1046206	1046580	.	-	.	ID=gene-LSA_RS07465;Name=LSA_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07465;old_locus_tag=LSA_10710
NC_015978.1	Protein Homology	CDS	1046206	1046580	.	-	0	ID=cds-WP_014082322.1;Parent=gene-LSA_RS07465;Dbxref=Genbank:WP_014082322.1;Name=WP_014082322.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025054.2;locus_tag=LSA_RS07465;product=GNAT family N-acetyltransferase;protein_id=WP_014082322.1;transl_table=11
NC_015978.1	RefSeq	gene	1046590	1046733	.	-	.	ID=gene-LSA_RS07765;Name=LSA_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07765;old_locus_tag=LSA_10720
NC_015978.1	GeneMarkS-2+	CDS	1046590	1046733	.	-	0	ID=cds-WP_014082323.1;Parent=gene-LSA_RS07765;Dbxref=Genbank:WP_014082323.1;Name=WP_014082323.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS07765;product=hypothetical protein;protein_id=WP_014082323.1;transl_table=11
NC_015978.1	RefSeq	gene	1047400	1047687	.	+	.	ID=gene-LSA_RS05420;Name=LSA_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05420
NC_015978.1	GeneMarkS-2+	CDS	1047400	1047687	.	+	0	ID=cds-WP_049777617.1;Parent=gene-LSA_RS05420;Dbxref=Genbank:WP_049777617.1;Name=WP_049777617.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS05420;product=hypothetical protein;protein_id=WP_049777617.1;transl_table=11
NC_015978.1	RefSeq	gene	1047766	1048137	.	+	.	ID=gene-LSA_RS05425;Name=LSA_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05425;old_locus_tag=LSA_10740
NC_015978.1	Protein Homology	CDS	1047766	1048137	.	+	0	ID=cds-WP_014082325.1;Parent=gene-LSA_RS05425;Dbxref=Genbank:WP_014082325.1;Name=WP_014082325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005693108.1;locus_tag=LSA_RS05425;product=DUF1304 domain-containing protein;protein_id=WP_014082325.1;transl_table=11
NC_015978.1	RefSeq	gene	1048574	1048819	.	-	.	ID=gene-LSA_RS07920;Name=LSA_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07920;old_locus_tag=LSA_10750
NC_015978.1	Protein Homology	CDS	1048574	1048819	.	-	0	ID=cds-WP_049777618.1;Parent=gene-LSA_RS07920;Dbxref=Genbank:WP_049777618.1;Name=WP_049777618.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013603.2;locus_tag=LSA_RS07920;product=protein rep;protein_id=WP_049777618.1;transl_table=11
NC_015978.1	RefSeq	gene	1048887	1049135	.	-	.	ID=gene-LSA_RS07925;Name=LSA_RS07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07925;old_locus_tag=LSA_10760
NC_015978.1	Protein Homology	CDS	1048887	1049135	.	-	0	ID=cds-WP_049777619.1;Parent=gene-LSA_RS07925;Dbxref=Genbank:WP_049777619.1;Name=WP_049777619.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013603.2;locus_tag=LSA_RS07925;product=protein rep;protein_id=WP_049777619.1;transl_table=11
NC_015978.1	RefSeq	gene	1049360	1049899	.	+	.	ID=gene-LSA_RS05435;Name=LSA_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05435;old_locus_tag=LSA_10770
NC_015978.1	Protein Homology	CDS	1049360	1049899	.	+	0	ID=cds-WP_014082326.1;Parent=gene-LSA_RS05435;Dbxref=Genbank:WP_014082326.1;Name=WP_014082326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014081655.1;locus_tag=LSA_RS05435;product=helix-turn-helix domain-containing protein;protein_id=WP_014082326.1;transl_table=11
NC_015978.1	RefSeq	gene	1049920	1050759	.	+	.	ID=gene-LSA_RS05440;Name=LSA_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05440;old_locus_tag=LSA_10780
NC_015978.1	Protein Homology	CDS	1049920	1050759	.	+	0	ID=cds-WP_258027362.1;Parent=gene-LSA_RS05440;Dbxref=Genbank:WP_258027362.1;Name=WP_258027362.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033516.0;locus_tag=LSA_RS05440;product=IS3 family transposase;protein_id=WP_258027362.1;transl_table=11
NC_015978.1	RefSeq	gene	1050765	1050890	.	+	.	ID=gene-LSA_RS07930;Name=LSA_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07930;old_locus_tag=LSA_10790
NC_015978.1	Protein Homology	CDS	1050765	1050890	.	+	0	ID=cds-WP_225361806.1;Parent=gene-LSA_RS07930;Dbxref=Genbank:WP_225361806.1;Name=WP_225361806.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016294.2;locus_tag=LSA_RS07930;product=DUF536 domain-containing protein;protein_id=WP_225361806.1;transl_table=11
NC_015978.1	RefSeq	gene	1050957	1051151	.	+	.	ID=gene-LSA_RS07935;Name=LSA_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07935;old_locus_tag=LSA_10800
NC_015978.1	GeneMarkS-2+	CDS	1050957	1051151	.	+	0	ID=cds-WP_225361807.1;Parent=gene-LSA_RS07935;Dbxref=Genbank:WP_225361807.1;Name=WP_225361807.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS07935;product=hypothetical protein;protein_id=WP_225361807.1;transl_table=11
NC_015978.1	RefSeq	gene	1052028	1053287	.	+	.	ID=gene-LSA_RS05455;Name=LSA_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05455;old_locus_tag=LSA_10820
NC_015978.1	GeneMarkS-2+	CDS	1052028	1053287	.	+	0	ID=cds-WP_041817907.1;Parent=gene-LSA_RS05455;Dbxref=Genbank:WP_041817907.1;Name=WP_041817907.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS05455;product=hypothetical protein;protein_id=WP_041817907.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	1053271	1054195	.	-	.	ID=gene-LSA_RS05460;Name=LSA_RS05460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS05460;old_locus_tag=LSA_10830;pseudo=true
NC_015978.1	Protein Homology	CDS	1053271	1054195	.	-	0	ID=cds-LSA_RS05460;Parent=gene-LSA_RS05460;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013355080.1;locus_tag=LSA_RS05460;product=IS30 family transposase;pseudo=true;transl_table=11
NC_015978.1	RefSeq	gene	1054381	1055244	.	-	.	ID=gene-LSA_RS05465;Name=LSA_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05465;old_locus_tag=LSA_10840
NC_015978.1	Protein Homology	CDS	1054381	1055244	.	-	0	ID=cds-WP_014082329.1;Parent=gene-LSA_RS05465;Dbxref=Genbank:WP_014082329.1;Name=WP_014082329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002878077.1;locus_tag=LSA_RS05465;product=Mrr restriction system protein;protein_id=WP_014082329.1;transl_table=11
NC_015978.1	RefSeq	gene	1055248	1056624	.	-	.	ID=gene-LSA_RS05470;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=LSA_RS05470;old_locus_tag=LSA_10850
NC_015978.1	Protein Homology	CDS	1055248	1056624	.	-	0	ID=cds-WP_014082330.1;Parent=gene-LSA_RS05470;Dbxref=Genbank:WP_014082330.1;Name=WP_014082330.1;Ontology_term=GO:0008649;gbkey=CDS;gene=rlmD;go_function=rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166662.1;locus_tag=LSA_RS05470;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_014082330.1;transl_table=11
NC_015978.1	RefSeq	gene	1056681	1057619	.	-	.	ID=gene-LSA_RS05475;Name=LSA_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05475;old_locus_tag=LSA_10860
NC_015978.1	Protein Homology	CDS	1056681	1057619	.	-	0	ID=cds-WP_014082331.1;Parent=gene-LSA_RS05475;Dbxref=Genbank:WP_014082331.1;Name=WP_014082331.1;Ontology_term=GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022773.1;locus_tag=LSA_RS05475;product=diacylglycerol kinase;protein_id=WP_014082331.1;transl_table=11
NC_015978.1	RefSeq	gene	1057636	1059057	.	-	.	ID=gene-LSA_RS05480;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=LSA_RS05480;old_locus_tag=LSA_10870
NC_015978.1	Protein Homology	CDS	1057636	1059057	.	-	0	ID=cds-WP_014082332.1;Parent=gene-LSA_RS05480;Dbxref=Genbank:WP_014082332.1;Name=WP_014082332.1;Ontology_term=GO:0016884;gbkey=CDS;gene=gatB;go_function=carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011668330.1;locus_tag=LSA_RS05480;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=WP_014082332.1;transl_table=11
NC_015978.1	RefSeq	gene	1059070	1060518	.	-	.	ID=gene-LSA_RS05485;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=LSA_RS05485;old_locus_tag=LSA_10880
NC_015978.1	Protein Homology	CDS	1059070	1060518	.	-	0	ID=cds-WP_014082333.1;Parent=gene-LSA_RS05485;Dbxref=Genbank:WP_014082333.1;Name=WP_014082333.1;Ontology_term=GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatA;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010689535.1;locus_tag=LSA_RS05485;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=WP_014082333.1;transl_table=11
NC_015978.1	RefSeq	gene	1060518	1060826	.	-	.	ID=gene-LSA_RS05490;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=LSA_RS05490;old_locus_tag=LSA_10890
NC_015978.1	Protein Homology	CDS	1060518	1060826	.	-	0	ID=cds-WP_014082334.1;Parent=gene-LSA_RS05490;Dbxref=Genbank:WP_014082334.1;Name=WP_014082334.1;Ontology_term=GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022769.1;locus_tag=LSA_RS05490;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=WP_014082334.1;transl_table=11
NC_015978.1	RefSeq	gene	1060847	1061977	.	-	.	ID=gene-LSA_RS05495;Name=LSA_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05495;old_locus_tag=LSA_10900
NC_015978.1	Protein Homology	CDS	1060847	1061977	.	-	0	ID=cds-WP_041817908.1;Parent=gene-LSA_RS05495;Dbxref=Genbank:WP_041817908.1;Name=WP_041817908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006500584.1;locus_tag=LSA_RS05495;product=CamS family sex pheromone protein;protein_id=WP_041817908.1;transl_table=11
NC_015978.1	RefSeq	gene	1061986	1064004	.	-	.	ID=gene-LSA_RS05500;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=LSA_RS05500;old_locus_tag=LSA_10910
NC_015978.1	Protein Homology	CDS	1061986	1064004	.	-	0	ID=cds-WP_049777653.1;Parent=gene-LSA_RS05500;Dbxref=Genbank:WP_049777653.1;Name=WP_049777653.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014940320.1;locus_tag=LSA_RS05500;product=NAD-dependent DNA ligase LigA;protein_id=WP_049777653.1;transl_table=11
NC_015978.1	RefSeq	gene	1064028	1066286	.	-	.	ID=gene-LSA_RS05505;Name=pcrA;gbkey=Gene;gene=pcrA;gene_biotype=protein_coding;locus_tag=LSA_RS05505;old_locus_tag=LSA_10920
NC_015978.1	Protein Homology	CDS	1064028	1066286	.	-	0	ID=cds-WP_014082337.1;Parent=gene-LSA_RS05505;Dbxref=Genbank:WP_014082337.1;Name=WP_014082337.1;Ontology_term=GO:0006268,GO:0006281,GO:0003678;gbkey=CDS;gene=pcrA;go_function=DNA helicase activity|0003678||IEA;go_process=DNA unwinding involved in DNA replication|0006268||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022766.1;locus_tag=LSA_RS05505;product=DNA helicase PcrA;protein_id=WP_014082337.1;transl_table=11
NC_015978.1	RefSeq	gene	1066376	1067467	.	-	.	ID=gene-LSA_RS05510;Name=LSA_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05510;old_locus_tag=LSA_10930
NC_015978.1	Protein Homology	CDS	1066376	1067467	.	-	0	ID=cds-WP_014082338.1;Parent=gene-LSA_RS05510;Dbxref=Genbank:WP_014082338.1;Name=WP_014082338.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014298.2;locus_tag=LSA_RS05510;product=ATP-grasp domain-containing protein;protein_id=WP_014082338.1;transl_table=11
NC_015978.1	RefSeq	gene	1067488	1068135	.	-	.	ID=gene-LSA_RS05515;Name=LSA_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05515;old_locus_tag=LSA_10940
NC_015978.1	Protein Homology	CDS	1067488	1068135	.	-	0	ID=cds-WP_225361809.1;Parent=gene-LSA_RS05515;Dbxref=Genbank:WP_225361809.1;Name=WP_225361809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166671.1;locus_tag=LSA_RS05515;product=glucosaminidase domain-containing protein;protein_id=WP_225361809.1;transl_table=11
NC_015978.1	RefSeq	gene	1068241	1068519	.	+	.	ID=gene-LSA_RS05520;Name=LSA_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05520;old_locus_tag=LSA_10950
NC_015978.1	Protein Homology	CDS	1068241	1068519	.	+	0	ID=cds-WP_014082340.1;Parent=gene-LSA_RS05520;Dbxref=Genbank:WP_014082340.1;Name=WP_014082340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022762.1;locus_tag=LSA_RS05520;product=DUF2187 family protein;protein_id=WP_014082340.1;transl_table=11
NC_015978.1	RefSeq	gene	1068564	1068947	.	-	.	ID=gene-LSA_RS05525;Name=LSA_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05525;old_locus_tag=LSA_10960
NC_015978.1	Protein Homology	CDS	1068564	1068947	.	-	0	ID=cds-WP_014082341.1;Parent=gene-LSA_RS05525;Dbxref=Genbank:WP_014082341.1;Name=WP_014082341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010760731.1;locus_tag=LSA_RS05525;product=VOC family protein;protein_id=WP_014082341.1;transl_table=11
NC_015978.1	RefSeq	gene	1068958	1069806	.	-	.	ID=gene-LSA_RS05530;Name=LSA_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05530;old_locus_tag=LSA_10970
NC_015978.1	Protein Homology	CDS	1068958	1069806	.	-	0	ID=cds-WP_041817912.1;Parent=gene-LSA_RS05530;Dbxref=Genbank:WP_041817912.1;Name=WP_041817912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166674.1;locus_tag=LSA_RS05530;product=SPFH/Band 7/PHB domain protein;protein_id=WP_041817912.1;transl_table=11
NC_015978.1	RefSeq	gene	1069793	1070047	.	-	.	ID=gene-LSA_RS05535;Name=LSA_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05535;old_locus_tag=LSA_10980
NC_015978.1	GeneMarkS-2+	CDS	1069793	1070047	.	-	0	ID=cds-WP_014082343.1;Parent=gene-LSA_RS05535;Dbxref=Genbank:WP_014082343.1;Name=WP_014082343.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS05535;product=hypothetical protein;protein_id=WP_014082343.1;transl_table=11
NC_015978.1	RefSeq	gene	1070390	1072072	.	-	.	ID=gene-LSA_RS05540;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=LSA_RS05540;old_locus_tag=LSA_10990
NC_015978.1	Protein Homology	CDS	1070390	1072072	.	-	0	ID=cds-WP_014082344.1;Parent=gene-LSA_RS05540;Dbxref=Genbank:WP_014082344.1;Name=WP_014082344.1;Ontology_term=GO:0006089,GO:0019516,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA,lactate oxidation|0019516||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002827303.1;locus_tag=LSA_RS05540;product=D-lactate dehydrogenase;protein_id=WP_014082344.1;transl_table=11
NC_015978.1	RefSeq	gene	1072242	1072634	.	-	.	ID=gene-LSA_RS05545;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=LSA_RS05545;old_locus_tag=LSA_11000
NC_015978.1	Protein Homology	CDS	1072242	1072634	.	-	0	ID=cds-WP_014082345.1;Parent=gene-LSA_RS05545;Dbxref=Genbank:WP_014082345.1;Name=WP_014082345.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011668466.1;locus_tag=LSA_RS05545;product=30S ribosomal protein S9;protein_id=WP_014082345.1;transl_table=11
NC_015978.1	RefSeq	gene	1072648	1073172	.	-	.	ID=gene-LSA_RS05550;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=LSA_RS05550;old_locus_tag=LSA_11010
NC_015978.1	Protein Homology	CDS	1072648	1073172	.	-	0	ID=cds-WP_014082346.1;Parent=gene-LSA_RS05550;Dbxref=Genbank:WP_014082346.1;Name=WP_014082346.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplM;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010750082.1;locus_tag=LSA_RS05550;product=50S ribosomal protein L13;protein_id=WP_014082346.1;transl_table=11
NC_015978.1	RefSeq	gene	1073225	1074016	.	-	.	ID=gene-LSA_RS05555;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=LSA_RS05555;old_locus_tag=LSA_11020
NC_015978.1	Protein Homology	CDS	1073225	1074016	.	-	0	ID=cds-WP_014082347.1;Parent=gene-LSA_RS05555;Dbxref=Genbank:WP_014082347.1;Name=WP_014082347.1;Ontology_term=GO:0006400,GO:0009982;gbkey=CDS;gene=truA;go_function=pseudouridine synthase activity|0009982||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022756.1;locus_tag=LSA_RS05555;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_014082347.1;transl_table=11
NC_015978.1	RefSeq	gene	1074016	1074816	.	-	.	ID=gene-LSA_RS05560;Name=LSA_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05560;old_locus_tag=LSA_11030
NC_015978.1	Protein Homology	CDS	1074016	1074816	.	-	0	ID=cds-WP_014082348.1;Parent=gene-LSA_RS05560;Dbxref=Genbank:WP_014082348.1;Name=WP_014082348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166681.1;locus_tag=LSA_RS05560;product=energy-coupling factor transporter transmembrane protein EcfT;protein_id=WP_014082348.1;transl_table=11
NC_015978.1	RefSeq	gene	1074829	1075677	.	-	.	ID=gene-LSA_RS05565;Name=LSA_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05565;old_locus_tag=LSA_11040
NC_015978.1	Protein Homology	CDS	1074829	1075677	.	-	0	ID=cds-WP_014082349.1;Parent=gene-LSA_RS05565;Dbxref=Genbank:WP_014082349.1;Name=WP_014082349.1;Ontology_term=GO:0006810,GO:0005524,GO:0042626,GO:0009898;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011285331.1;locus_tag=LSA_RS05565;product=energy-coupling factor transporter ATPase;protein_id=WP_014082349.1;transl_table=11
NC_015978.1	RefSeq	gene	1075656	1076480	.	-	.	ID=gene-LSA_RS05570;Name=LSA_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05570;old_locus_tag=LSA_11050
NC_015978.1	Protein Homology	CDS	1075656	1076480	.	-	0	ID=cds-WP_041817914.1;Parent=gene-LSA_RS05570;Dbxref=Genbank:WP_041817914.1;Name=WP_041817914.1;Ontology_term=GO:0006810,GO:0005524,GO:0042626,GO:0009898;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: protein motif:HMM:NF010167.0;locus_tag=LSA_RS05570;product=energy-coupling factor transporter ATPase;protein_id=WP_041817914.1;transl_table=11
NC_015978.1	RefSeq	gene	1076643	1077023	.	-	.	ID=gene-LSA_RS05575;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=LSA_RS05575;old_locus_tag=LSA_11060
NC_015978.1	Protein Homology	CDS	1076643	1077023	.	-	0	ID=cds-WP_014082351.1;Parent=gene-LSA_RS05575;Dbxref=Genbank:WP_014082351.1;Name=WP_014082351.1;Ontology_term=GO:0006412,GO:0003735,GO:0005762,GO:0022625;gbkey=CDS;gene=rplQ;go_component=mitochondrial large ribosomal subunit|0005762||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331490.1;locus_tag=LSA_RS05575;product=50S ribosomal protein L17;protein_id=WP_014082351.1;transl_table=11
NC_015978.1	RefSeq	gene	1077045	1077995	.	-	.	ID=gene-LSA_RS05580;Name=LSA_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05580;old_locus_tag=LSA_11070
NC_015978.1	Protein Homology	CDS	1077045	1077995	.	-	0	ID=cds-WP_014082352.1;Parent=gene-LSA_RS05580;Dbxref=Genbank:WP_014082352.1;Name=WP_014082352.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003701335.1;locus_tag=LSA_RS05580;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_014082352.1;transl_table=11
NC_015978.1	RefSeq	gene	1078058	1078444	.	-	.	ID=gene-LSA_RS05585;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=LSA_RS05585;old_locus_tag=LSA_11080
NC_015978.1	Protein Homology	CDS	1078058	1078444	.	-	0	ID=cds-WP_041817915.1;Parent=gene-LSA_RS05585;Dbxref=Genbank:WP_041817915.1;Name=WP_041817915.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004050265.1;locus_tag=LSA_RS05585;product=30S ribosomal protein S11;protein_id=WP_041817915.1;transl_table=11
NC_015978.1	RefSeq	gene	1078472	1078822	.	-	.	ID=gene-LSA_RS05590;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=LSA_RS05590;old_locus_tag=LSA_11090
NC_015978.1	Protein Homology	CDS	1078472	1078822	.	-	0	ID=cds-WP_014082354.1;Parent=gene-LSA_RS05590;Dbxref=Genbank:WP_014082354.1;Name=WP_014082354.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;gene=rpsM;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006729433.1;locus_tag=LSA_RS05590;product=30S ribosomal protein S13;protein_id=WP_014082354.1;transl_table=11
NC_015978.1	RefSeq	gene	1078843	1078962	.	-	.	ID=gene-LSA_RS05595;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=LSA_RS05595;old_locus_tag=LSA_11100
NC_015978.1	Protein Homology	CDS	1078843	1078962	.	-	0	ID=cds-WP_014082355.1;Parent=gene-LSA_RS05595;Dbxref=Genbank:WP_014082355.1;Name=WP_014082355.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003664535.1;locus_tag=LSA_RS05595;product=50S ribosomal protein L36;protein_id=WP_014082355.1;transl_table=11
NC_015978.1	RefSeq	gene	1078990	1079208	.	-	.	ID=gene-LSA_RS05600;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=LSA_RS05600;old_locus_tag=LSA_11110
NC_015978.1	Protein Homology	CDS	1078990	1079208	.	-	0	ID=cds-WP_014082356.1;Parent=gene-LSA_RS05600;Dbxref=Genbank:WP_014082356.1;Name=WP_014082356.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017185218.1;locus_tag=LSA_RS05600;product=translation initiation factor IF-1;protein_id=WP_014082356.1;transl_table=11
NC_015978.1	RefSeq	gene	1079307	1079966	.	-	.	ID=gene-LSA_RS05605;Name=LSA_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05605;old_locus_tag=LSA_11120
NC_015978.1	Protein Homology	CDS	1079307	1079966	.	-	0	ID=cds-WP_041817916.1;Parent=gene-LSA_RS05605;Dbxref=Genbank:WP_041817916.1;Name=WP_041817916.1;Ontology_term=GO:0006139,GO:0005524,GO:0016776,GO:0019205;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,nucleobase-containing compound kinase activity|0019205||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003672681.1;locus_tag=LSA_RS05605;product=adenylate kinase;protein_id=WP_041817916.1;transl_table=11
NC_015978.1	RefSeq	gene	1079968	1081293	.	-	.	ID=gene-LSA_RS05610;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=LSA_RS05610;old_locus_tag=LSA_11130
NC_015978.1	Protein Homology	CDS	1079968	1081293	.	-	0	ID=cds-WP_014082358.1;Parent=gene-LSA_RS05610;Dbxref=Genbank:WP_014082358.1;Name=WP_014082358.1;Ontology_term=GO:0043952,GO:0015450,GO:0005887;gbkey=CDS;gene=secY;go_component=integral component of plasma membrane|0005887||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022740.1;locus_tag=LSA_RS05610;product=preprotein translocase subunit SecY;protein_id=WP_014082358.1;transl_table=11
NC_015978.1	RefSeq	gene	1081293	1081724	.	-	.	ID=gene-LSA_RS05615;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=LSA_RS05615
NC_015978.1	Protein Homology	CDS	1081293	1081724	.	-	0	ID=cds-WP_041817918.1;Parent=gene-LSA_RS05615;Dbxref=Genbank:WP_041817918.1;Name=WP_041817918.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplO;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019251235.1;locus_tag=LSA_RS05615;product=50S ribosomal protein L15;protein_id=WP_041817918.1;transl_table=11
NC_015978.1	RefSeq	gene	1081755	1081940	.	-	.	ID=gene-LSA_RS05620;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=LSA_RS05620;old_locus_tag=LSA_11150
NC_015978.1	Protein Homology	CDS	1081755	1081940	.	-	0	ID=cds-WP_014082360.1;Parent=gene-LSA_RS05620;Dbxref=Genbank:WP_014082360.1;Name=WP_014082360.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmD;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005686735.1;locus_tag=LSA_RS05620;product=50S ribosomal protein L30;protein_id=WP_014082360.1;transl_table=11
NC_015978.1	RefSeq	gene	1081953	1082456	.	-	.	ID=gene-LSA_RS05625;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=LSA_RS05625;old_locus_tag=LSA_11160
NC_015978.1	Protein Homology	CDS	1081953	1082456	.	-	0	ID=cds-WP_014082361.1;Parent=gene-LSA_RS05625;Dbxref=Genbank:WP_014082361.1;Name=WP_014082361.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsE;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011668482.1;locus_tag=LSA_RS05625;product=30S ribosomal protein S5;protein_id=WP_014082361.1;transl_table=11
NC_015978.1	RefSeq	gene	1082478	1082834	.	-	.	ID=gene-LSA_RS05630;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=LSA_RS05630;old_locus_tag=LSA_11170
NC_015978.1	Protein Homology	CDS	1082478	1082834	.	-	0	ID=cds-WP_041817919.1;Parent=gene-LSA_RS05630;Dbxref=Genbank:WP_041817919.1;Name=WP_041817919.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplR;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000628816.1;locus_tag=LSA_RS05630;product=50S ribosomal protein L18;protein_id=WP_041817919.1;transl_table=11
NC_015978.1	RefSeq	gene	1082872	1083411	.	-	.	ID=gene-LSA_RS05635;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=LSA_RS05635;old_locus_tag=LSA_11180
NC_015978.1	Protein Homology	CDS	1082872	1083411	.	-	0	ID=cds-WP_014082363.1;Parent=gene-LSA_RS05635;Dbxref=Genbank:WP_014082363.1;Name=WP_014082363.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0022625;gbkey=CDS;gene=rplF;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003559526.1;locus_tag=LSA_RS05635;product=50S ribosomal protein L6;protein_id=WP_014082363.1;transl_table=11
NC_015978.1	RefSeq	gene	1083443	1083841	.	-	.	ID=gene-LSA_RS05640;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=LSA_RS05640;old_locus_tag=LSA_11190
NC_015978.1	Protein Homology	CDS	1083443	1083841	.	-	0	ID=cds-WP_014082364.1;Parent=gene-LSA_RS05640;Dbxref=Genbank:WP_014082364.1;Name=WP_014082364.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010742763.1;locus_tag=LSA_RS05640;product=30S ribosomal protein S8;protein_id=WP_014082364.1;transl_table=11
NC_015978.1	RefSeq	gene	1083874	1084059	.	-	.	ID=gene-LSA_RS05645;Name=LSA_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05645;old_locus_tag=LSA_11200
NC_015978.1	Protein Homology	CDS	1083874	1084059	.	-	0	ID=cds-WP_014082365.1;Parent=gene-LSA_RS05645;Dbxref=Genbank:WP_014082365.1;Name=WP_014082365.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002946164.1;locus_tag=LSA_RS05645;product=type Z 30S ribosomal protein S14;protein_id=WP_014082365.1;transl_table=11
NC_015978.1	RefSeq	gene	1084071	1084613	.	-	.	ID=gene-LSA_RS05650;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=LSA_RS05650;old_locus_tag=LSA_11210
NC_015978.1	Protein Homology	CDS	1084071	1084613	.	-	0	ID=cds-WP_014082366.1;Parent=gene-LSA_RS05650;Dbxref=Genbank:WP_014082366.1;Name=WP_014082366.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003638072.1;locus_tag=LSA_RS05650;product=50S ribosomal protein L5;protein_id=WP_014082366.1;transl_table=11
NC_015978.1	RefSeq	gene	1084644	1084952	.	-	.	ID=gene-LSA_RS05655;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=LSA_RS05655;old_locus_tag=LSA_11220
NC_015978.1	Protein Homology	CDS	1084644	1084952	.	-	0	ID=cds-WP_014082367.1;Parent=gene-LSA_RS05655;Dbxref=Genbank:WP_014082367.1;Name=WP_014082367.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplX;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003681592.1;locus_tag=LSA_RS05655;product=50S ribosomal protein L24;protein_id=WP_014082367.1;transl_table=11
NC_015978.1	RefSeq	gene	1084987	1085355	.	-	.	ID=gene-LSA_RS05660;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=LSA_RS05660;old_locus_tag=LSA_11230
NC_015978.1	Protein Homology	CDS	1084987	1085355	.	-	0	ID=cds-WP_014082368.1;Parent=gene-LSA_RS05660;Dbxref=Genbank:WP_014082368.1;Name=WP_014082368.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplN;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012727667.1;locus_tag=LSA_RS05660;product=50S ribosomal protein L14;protein_id=WP_014082368.1;transl_table=11
NC_015978.1	RefSeq	gene	1085410	1085676	.	-	.	ID=gene-LSA_RS05665;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=LSA_RS05665;old_locus_tag=LSA_11240
NC_015978.1	Protein Homology	CDS	1085410	1085676	.	-	0	ID=cds-WP_014082369.1;Parent=gene-LSA_RS05665;Dbxref=Genbank:WP_014082369.1;Name=WP_014082369.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004106.1;locus_tag=LSA_RS05665;product=30S ribosomal protein S17;protein_id=WP_014082369.1;transl_table=11
NC_015978.1	RefSeq	gene	1085705	1085899	.	-	.	ID=gene-LSA_RS05670;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=LSA_RS05670;old_locus_tag=LSA_11250
NC_015978.1	Protein Homology	CDS	1085705	1085899	.	-	0	ID=cds-WP_014082370.1;Parent=gene-LSA_RS05670;Dbxref=Genbank:WP_014082370.1;Name=WP_014082370.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmC;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000855718.1;locus_tag=LSA_RS05670;product=50S ribosomal protein L29;protein_id=WP_014082370.1;transl_table=11
NC_015978.1	RefSeq	gene	1085889	1086323	.	-	.	ID=gene-LSA_RS05675;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=LSA_RS05675;old_locus_tag=LSA_11260
NC_015978.1	Protein Homology	CDS	1085889	1086323	.	-	0	ID=cds-WP_014082371.1;Parent=gene-LSA_RS05675;Dbxref=Genbank:WP_014082371.1;Name=WP_014082371.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplP;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011375443.1;locus_tag=LSA_RS05675;product=50S ribosomal protein L16;protein_id=WP_014082371.1;transl_table=11
NC_015978.1	RefSeq	gene	1086326	1086988	.	-	.	ID=gene-LSA_RS05680;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=LSA_RS05680;old_locus_tag=LSA_11270
NC_015978.1	Protein Homology	CDS	1086326	1086988	.	-	0	ID=cds-WP_014082372.1;Parent=gene-LSA_RS05680;Dbxref=Genbank:WP_014082372.1;Name=WP_014082372.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsC;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011668493.1;locus_tag=LSA_RS05680;product=30S ribosomal protein S3;protein_id=WP_014082372.1;transl_table=11
NC_015978.1	RefSeq	gene	1086992	1087348	.	-	.	ID=gene-LSA_RS05685;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=LSA_RS05685;old_locus_tag=LSA_11280
NC_015978.1	Protein Homology	CDS	1086992	1087348	.	-	0	ID=cds-WP_014082373.1;Parent=gene-LSA_RS05685;Dbxref=Genbank:WP_014082373.1;Name=WP_014082373.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplV;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002833333.1;locus_tag=LSA_RS05685;product=50S ribosomal protein L22;protein_id=WP_014082373.1;transl_table=11
NC_015978.1	RefSeq	gene	1087364	1087648	.	-	.	ID=gene-LSA_RS05690;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=LSA_RS05690;old_locus_tag=LSA_11290
NC_015978.1	Protein Homology	CDS	1087364	1087648	.	-	0	ID=cds-WP_014082374.1;Parent=gene-LSA_RS05690;Dbxref=Genbank:WP_014082374.1;Name=WP_014082374.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsS;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011668495.1;locus_tag=LSA_RS05690;product=30S ribosomal protein S19;protein_id=WP_014082374.1;transl_table=11
NC_015978.1	RefSeq	gene	1087693	1088538	.	-	.	ID=gene-LSA_RS05695;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=LSA_RS05695;old_locus_tag=LSA_11300
NC_015978.1	Protein Homology	CDS	1087693	1088538	.	-	0	ID=cds-WP_014082375.1;Parent=gene-LSA_RS05695;Dbxref=Genbank:WP_014082375.1;Name=WP_014082375.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplB;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020090144.1;locus_tag=LSA_RS05695;product=50S ribosomal protein L2;protein_id=WP_014082375.1;transl_table=11
NC_015978.1	RefSeq	gene	1088564	1088851	.	-	.	ID=gene-LSA_RS05700;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=LSA_RS05700;old_locus_tag=LSA_11310
NC_015978.1	Protein Homology	CDS	1088564	1088851	.	-	0	ID=cds-WP_014082376.1;Parent=gene-LSA_RS05700;Dbxref=Genbank:WP_014082376.1;Name=WP_014082376.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014082376.1;locus_tag=LSA_RS05700;product=50S ribosomal protein L23;protein_id=WP_014082376.1;transl_table=11
NC_015978.1	RefSeq	gene	1088851	1089474	.	-	.	ID=gene-LSA_RS05705;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=LSA_RS05705;old_locus_tag=LSA_11320
NC_015978.1	Protein Homology	CDS	1088851	1089474	.	-	0	ID=cds-WP_014082377.1;Parent=gene-LSA_RS05705;Dbxref=Genbank:WP_014082377.1;Name=WP_014082377.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003701303.1;locus_tag=LSA_RS05705;product=50S ribosomal protein L4;protein_id=WP_014082377.1;transl_table=11
NC_015978.1	RefSeq	gene	1089493	1090125	.	-	.	ID=gene-LSA_RS05710;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=LSA_RS05710;old_locus_tag=LSA_11330
NC_015978.1	Protein Homology	CDS	1089493	1090125	.	-	0	ID=cds-WP_014082378.1;Parent=gene-LSA_RS05710;Dbxref=Genbank:WP_014082378.1;Name=WP_014082378.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008211805.1;locus_tag=LSA_RS05710;product=50S ribosomal protein L3;protein_id=WP_014082378.1;transl_table=11
NC_015978.1	RefSeq	gene	1090155	1090463	.	-	.	ID=gene-LSA_RS05715;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=LSA_RS05715;old_locus_tag=LSA_11340
NC_015978.1	Protein Homology	CDS	1090155	1090463	.	-	0	ID=cds-WP_041817923.1;Parent=gene-LSA_RS05715;Dbxref=Genbank:WP_041817923.1;Name=WP_041817923.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003672692.1;locus_tag=LSA_RS05715;product=30S ribosomal protein S10;protein_id=WP_041817923.1;transl_table=11
NC_015978.1	RefSeq	gene	1090735	1092825	.	-	.	ID=gene-LSA_RS05720;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=LSA_RS05720;old_locus_tag=LSA_11350
NC_015978.1	Protein Homology	CDS	1090735	1092825	.	-	0	ID=cds-WP_014082380.1;Parent=gene-LSA_RS05720;Dbxref=Genbank:WP_014082380.1;Name=WP_014082380.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008842369.1;locus_tag=LSA_RS05720;product=elongation factor G;protein_id=WP_014082380.1;transl_table=11
NC_015978.1	RefSeq	gene	1092911	1093381	.	-	.	ID=gene-LSA_RS05725;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=LSA_RS05725;old_locus_tag=LSA_11360
NC_015978.1	Protein Homology	CDS	1092911	1093381	.	-	0	ID=cds-WP_014082381.1;Parent=gene-LSA_RS05725;Dbxref=Genbank:WP_014082381.1;Name=WP_014082381.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsG;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010720461.1;locus_tag=LSA_RS05725;product=30S ribosomal protein S7;protein_id=WP_014082381.1;transl_table=11
NC_015978.1	RefSeq	gene	1093407	1093826	.	-	.	ID=gene-LSA_RS05730;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=LSA_RS05730;old_locus_tag=LSA_11370
NC_015978.1	Protein Homology	CDS	1093407	1093826	.	-	0	ID=cds-WP_014082382.1;Parent=gene-LSA_RS05730;Dbxref=Genbank:WP_014082382.1;Name=WP_014082382.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsL;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003668789.1;locus_tag=LSA_RS05730;product=30S ribosomal protein S12;protein_id=WP_014082382.1;transl_table=11
NC_015978.1	cmsearch	riboswitch	1094650	1094745	.	+	.	ID=id-NC_015978.1:1094650..1094745;Dbxref=RFAM:RF00167;Note=purine riboswitch;bound_moiety=guanine and/or adenine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
NC_015978.1	RefSeq	gene	1094778	1095350	.	+	.	ID=gene-LSA_RS05740;Name=LSA_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05740;old_locus_tag=LSA_11390
NC_015978.1	Protein Homology	CDS	1094778	1095350	.	+	0	ID=cds-WP_014082384.1;Parent=gene-LSA_RS05740;Dbxref=Genbank:WP_014082384.1;Name=WP_014082384.1;Ontology_term=GO:0043101,GO:0046110,GO:0016763;gbkey=CDS;go_function=pentosyltransferase activity|0016763||IEA;go_process=purine-containing compound salvage|0043101||IEA,xanthine metabolic process|0046110||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006500588.1;locus_tag=LSA_RS05740;product=xanthine phosphoribosyltransferase;protein_id=WP_014082384.1;transl_table=11
NC_015978.1	RefSeq	gene	1095740	1099387	.	-	.	ID=gene-LSA_RS05750;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=LSA_RS05750;old_locus_tag=LSA_11410
NC_015978.1	Protein Homology	CDS	1095740	1099387	.	-	0	ID=cds-WP_041817926.1;Parent=gene-LSA_RS05750;Dbxref=Genbank:WP_041817926.1;Name=WP_041817926.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoC;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010580242.1;locus_tag=LSA_RS05750;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_041817926.1;transl_table=11
NC_015978.1	RefSeq	gene	1099405	1103010	.	-	.	ID=gene-LSA_RS05755;Name=LSA_RS05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05755;old_locus_tag=LSA_11420
NC_015978.1	Protein Homology	CDS	1099405	1103010	.	-	0	ID=cds-WP_041818134.1;Parent=gene-LSA_RS05755;Dbxref=Genbank:WP_041818134.1;Name=WP_041818134.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0032549;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,ribonucleoside binding|0032549||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166717.1;locus_tag=LSA_RS05755;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_041818134.1;transl_table=11
NC_015978.1	RefSeq	gene	1103294	1105753	.	-	.	ID=gene-LSA_RS05760;Name=LSA_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05760;old_locus_tag=LSA_11430
NC_015978.1	Protein Homology	CDS	1103294	1105753	.	-	0	ID=cds-WP_041817927.1;Parent=gene-LSA_RS05760;Dbxref=Genbank:WP_041817927.1;Name=WP_041817927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166718.1;locus_tag=LSA_RS05760;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=WP_041817927.1;transl_table=11
NC_015978.1	RefSeq	gene	1105772	1106242	.	-	.	ID=gene-LSA_RS05765;Name=LSA_RS05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05765;old_locus_tag=LSA_11440
NC_015978.1	Protein Homology	CDS	1105772	1106242	.	-	0	ID=cds-WP_014082389.1;Parent=gene-LSA_RS05765;Dbxref=Genbank:WP_014082389.1;Name=WP_014082389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022695.1;locus_tag=LSA_RS05765;product=CtsR family transcriptional regulator;protein_id=WP_014082389.1;transl_table=11
NC_015978.1	RefSeq	gene	1106370	1106443	.	-	.	ID=gene-LSA_RS05770;Name=LSA_RS05770;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS05770;old_locus_tag=LSA_R00720
NC_015978.1	tRNAscan-SE	tRNA	1106370	1106443	.	-	.	ID=rna-LSA_RS05770;Parent=gene-LSA_RS05770;anticodon=(pos:complement(1106407..1106409));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05770;product=tRNA-Pro
NC_015978.1	tRNAscan-SE	exon	1106370	1106443	.	-	.	ID=exon-LSA_RS05770-1;Parent=rna-LSA_RS05770;anticodon=(pos:complement(1106407..1106409));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05770;product=tRNA-Pro
NC_015978.1	RefSeq	gene	1106450	1106523	.	-	.	ID=gene-LSA_RS05775;Name=LSA_RS05775;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS05775;old_locus_tag=LSA_R00730
NC_015978.1	tRNAscan-SE	tRNA	1106450	1106523	.	-	.	ID=rna-LSA_RS05775;Parent=gene-LSA_RS05775;anticodon=(pos:complement(1106487..1106489));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05775;product=tRNA-Arg
NC_015978.1	tRNAscan-SE	exon	1106450	1106523	.	-	.	ID=exon-LSA_RS05775-1;Parent=rna-LSA_RS05775;anticodon=(pos:complement(1106487..1106489));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05775;product=tRNA-Arg
NC_015978.1	RefSeq	gene	1106532	1106617	.	-	.	ID=gene-LSA_RS05780;Name=LSA_RS05780;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS05780;old_locus_tag=LSA_R00740
NC_015978.1	tRNAscan-SE	tRNA	1106532	1106617	.	-	.	ID=rna-LSA_RS05780;Parent=gene-LSA_RS05780;anticodon=(pos:complement(1106581..1106583));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05780;product=tRNA-Leu
NC_015978.1	tRNAscan-SE	exon	1106532	1106617	.	-	.	ID=exon-LSA_RS05780-1;Parent=rna-LSA_RS05780;anticodon=(pos:complement(1106581..1106583));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05780;product=tRNA-Leu
NC_015978.1	RefSeq	gene	1106641	1106712	.	-	.	ID=gene-LSA_RS05785;Name=LSA_RS05785;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS05785;old_locus_tag=LSA_R00750
NC_015978.1	tRNAscan-SE	tRNA	1106641	1106712	.	-	.	ID=rna-LSA_RS05785;Parent=gene-LSA_RS05785;anticodon=(pos:complement(1106678..1106680));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05785;product=tRNA-Gly
NC_015978.1	tRNAscan-SE	exon	1106641	1106712	.	-	.	ID=exon-LSA_RS05785-1;Parent=rna-LSA_RS05785;anticodon=(pos:complement(1106678..1106680));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05785;product=tRNA-Gly
NC_015978.1	RefSeq	gene	1106717	1106790	.	-	.	ID=gene-LSA_RS05790;Name=LSA_RS05790;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS05790;old_locus_tag=LSA_R00760
NC_015978.1	tRNAscan-SE	tRNA	1106717	1106790	.	-	.	ID=rna-LSA_RS05790;Parent=gene-LSA_RS05790;anticodon=(pos:complement(1106754..1106756));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05790;product=tRNA-Thr
NC_015978.1	tRNAscan-SE	exon	1106717	1106790	.	-	.	ID=exon-LSA_RS05790-1;Parent=rna-LSA_RS05790;anticodon=(pos:complement(1106754..1106756));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05790;product=tRNA-Thr
NC_015978.1	RefSeq	gene	1106801	1106883	.	-	.	ID=gene-LSA_RS05795;Name=LSA_RS05795;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS05795;old_locus_tag=LSA_R00770
NC_015978.1	tRNAscan-SE	tRNA	1106801	1106883	.	-	.	ID=rna-LSA_RS05795;Parent=gene-LSA_RS05795;anticodon=(pos:complement(1106847..1106849));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05795;product=tRNA-Leu
NC_015978.1	tRNAscan-SE	exon	1106801	1106883	.	-	.	ID=exon-LSA_RS05795-1;Parent=rna-LSA_RS05795;anticodon=(pos:complement(1106847..1106849));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05795;product=tRNA-Leu
NC_015978.1	RefSeq	gene	1106913	1106985	.	-	.	ID=gene-LSA_RS05800;Name=LSA_RS05800;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS05800;old_locus_tag=LSA_R00780
NC_015978.1	tRNAscan-SE	tRNA	1106913	1106985	.	-	.	ID=rna-LSA_RS05800;Parent=gene-LSA_RS05800;anticodon=(pos:complement(1106950..1106952));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05800;product=tRNA-Lys
NC_015978.1	tRNAscan-SE	exon	1106913	1106985	.	-	.	ID=exon-LSA_RS05800-1;Parent=rna-LSA_RS05800;anticodon=(pos:complement(1106950..1106952));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05800;product=tRNA-Lys
NC_015978.1	RefSeq	gene	1106988	1107060	.	-	.	ID=gene-LSA_RS05805;Name=LSA_RS05805;gbkey=Gene;gene_biotype=tRNA;locus_tag=LSA_RS05805;old_locus_tag=LSA_R00790
NC_015978.1	tRNAscan-SE	tRNA	1106988	1107060	.	-	.	ID=rna-LSA_RS05805;Parent=gene-LSA_RS05805;anticodon=(pos:complement(1107025..1107027));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05805;product=tRNA-Val
NC_015978.1	tRNAscan-SE	exon	1106988	1107060	.	-	.	ID=exon-LSA_RS05805-1;Parent=rna-LSA_RS05805;anticodon=(pos:complement(1107025..1107027));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LSA_RS05805;product=tRNA-Val
NC_015978.1	RefSeq	gene	1107278	1108234	.	+	.	ID=gene-LSA_RS05810;Name=LSA_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05810;old_locus_tag=LSA_11450
NC_015978.1	Protein Homology	CDS	1107278	1108234	.	+	0	ID=cds-WP_014082390.1;Parent=gene-LSA_RS05810;Dbxref=Genbank:WP_014082390.1;Name=WP_014082390.1;Ontology_term=GO:0006096,GO:0004459,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=L-lactate dehydrogenase activity|0004459||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166839.1;locus_tag=LSA_RS05810;product=L-lactate dehydrogenase;protein_id=WP_014082390.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	1108292	1109456	.	-	.	ID=gene-LSA_RS05815;Name=LSA_RS05815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS05815;old_locus_tag=LSA_11460;pseudo=true
NC_015978.1	Protein Homology	CDS	1108292	1109456	.	-	0	ID=cds-LSA_RS05815;Parent=gene-LSA_RS05815;Note=frameshifted;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166840.1;locus_tag=LSA_RS05815;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;pseudo=true;transl_table=11
NC_015978.1	RefSeq	gene	1109564	1111903	.	+	.	ID=gene-LSA_RS05820;Name=LSA_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05820;old_locus_tag=LSA_11480
NC_015978.1	Protein Homology	CDS	1109564	1111903	.	+	0	ID=cds-WP_014082391.1;Parent=gene-LSA_RS05820;Dbxref=Genbank:WP_014082391.1;Name=WP_014082391.1;Ontology_term=GO:0006508,GO:0008239;gbkey=CDS;go_function=dipeptidyl-peptidase activity|0008239||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166841.1;locus_tag=LSA_RS05820;product=Xaa-Pro dipeptidyl-peptidase;protein_id=WP_014082391.1;transl_table=11
NC_015978.1	RefSeq	gene	1111947	1112738	.	-	.	ID=gene-LSA_RS05825;Name=phnE;gbkey=Gene;gene=phnE;gene_biotype=protein_coding;locus_tag=LSA_RS05825;old_locus_tag=LSA_11490
NC_015978.1	Protein Homology	CDS	1111947	1112738	.	-	0	ID=cds-WP_041817929.1;Parent=gene-LSA_RS05825;Dbxref=Genbank:WP_041817929.1;Name=WP_041817929.1;Ontology_term=GO:0015716,GO:0015416,GO:0005887,GO:0055052;gbkey=CDS;gene=phnE;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002829214.1;locus_tag=LSA_RS05825;product=phosphonate ABC transporter%2C permease protein PhnE;protein_id=WP_041817929.1;transl_table=11
NC_015978.1	RefSeq	gene	1112738	1113523	.	-	.	ID=gene-LSA_RS05830;Name=phnE;gbkey=Gene;gene=phnE;gene_biotype=protein_coding;locus_tag=LSA_RS05830;old_locus_tag=LSA_11500
NC_015978.1	Protein Homology	CDS	1112738	1113523	.	-	0	ID=cds-WP_041817931.1;Parent=gene-LSA_RS05830;Dbxref=Genbank:WP_041817931.1;Name=WP_041817931.1;Ontology_term=GO:0015716,GO:0015416,GO:0005887,GO:0055052;gbkey=CDS;gene=phnE;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017867672.1;locus_tag=LSA_RS05830;product=phosphonate ABC transporter%2C permease protein PhnE;protein_id=WP_041817931.1;transl_table=11
NC_015978.1	RefSeq	gene	1113523	1114284	.	-	.	ID=gene-LSA_RS05835;Name=phnC;gbkey=Gene;gene=phnC;gene_biotype=protein_coding;locus_tag=LSA_RS05835;old_locus_tag=LSA_11510
NC_015978.1	Protein Homology	CDS	1113523	1114284	.	-	0	ID=cds-WP_014082394.1;Parent=gene-LSA_RS05835;Dbxref=Genbank:WP_014082394.1;Name=WP_014082394.1;Ontology_term=GO:0015716,GO:0005524,GO:0015416,GO:0009898,GO:0055052;gbkey=CDS;gene=phnC;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022164.1;locus_tag=LSA_RS05835;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_014082394.1;transl_table=11
NC_015978.1	RefSeq	gene	1114327	1114515	.	-	.	ID=gene-LSA_RS05840;Name=LSA_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05840;old_locus_tag=LSA_11520
NC_015978.1	GeneMarkS-2+	CDS	1114327	1114515	.	-	0	ID=cds-WP_041817932.1;Parent=gene-LSA_RS05840;Dbxref=Genbank:WP_041817932.1;Name=WP_041817932.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS05840;product=hypothetical protein;protein_id=WP_041817932.1;transl_table=11
NC_015978.1	RefSeq	gene	1114817	1116106	.	-	.	ID=gene-LSA_RS05845;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=LSA_RS05845;old_locus_tag=LSA_11530
NC_015978.1	Protein Homology	CDS	1114817	1116106	.	-	0	ID=cds-WP_014082395.1;Parent=gene-LSA_RS05845;Dbxref=Genbank:WP_014082395.1;Name=WP_014082395.1;Ontology_term=GO:0006434,GO:0004828,GO:0005737;gbkey=CDS;gene=serS;go_component=cytoplasm|0005737||IEA;go_function=serine-tRNA ligase activity|0004828||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022691.1;locus_tag=LSA_RS05845;product=serine--tRNA ligase;protein_id=WP_014082395.1;transl_table=11
NC_015978.1	RefSeq	gene	1116365	1117003	.	-	.	ID=gene-LSA_RS05850;Name=LSA_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05850;old_locus_tag=LSA_11540
NC_015978.1	Protein Homology	CDS	1116365	1117003	.	-	0	ID=cds-WP_014082396.1;Parent=gene-LSA_RS05850;Dbxref=Genbank:WP_014082396.1;Name=WP_014082396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022689.1;locus_tag=LSA_RS05850;product=deoxynucleoside kinase;protein_id=WP_014082396.1;transl_table=11
NC_015978.1	RefSeq	gene	1117085	1118545	.	-	.	ID=gene-LSA_RS05855;Name=LSA_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05855;old_locus_tag=LSA_11550
NC_015978.1	Protein Homology	CDS	1117085	1118545	.	-	0	ID=cds-WP_014082397.1;Parent=gene-LSA_RS05855;Dbxref=Genbank:WP_014082397.1;Name=WP_014082397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166848.1;locus_tag=LSA_RS05855;product=amino acid permease;protein_id=WP_014082397.1;transl_table=11
NC_015978.1	cmsearch	riboswitch	1118644	1118816	.	-	.	ID=id-NC_015978.1:1118644..1118816;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
NC_015978.1	RefSeq	pseudogene	1118922	1119479	.	+	.	ID=gene-LSA_RS05860;Name=LSA_RS05860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS05860;old_locus_tag=LSA_11570;pseudo=true
NC_015978.1	Protein Homology	CDS	1118922	1119479	.	+	0	ID=cds-LSA_RS05860;Parent=gene-LSA_RS05860;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010621585.1;locus_tag=LSA_RS05860;product=cysteine hydrolase;pseudo=true;transl_table=11
NC_015978.1	RefSeq	gene	1119534	1120310	.	-	.	ID=gene-LSA_RS05865;Name=LSA_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05865;old_locus_tag=LSA_11580
NC_015978.1	Protein Homology	CDS	1119534	1120310	.	-	0	ID=cds-WP_014082399.1;Parent=gene-LSA_RS05865;Dbxref=Genbank:WP_014082399.1;Name=WP_014082399.1;Ontology_term=GO:0009986;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: protein motif:HMM:NF012948.2;locus_tag=LSA_RS05865;product=LPXTG cell wall anchor domain-containing protein;protein_id=WP_014082399.1;transl_table=11
NC_015978.1	RefSeq	gene	1120585	1120782	.	-	.	ID=gene-LSA_RS05870;Name=LSA_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05870;old_locus_tag=LSA_11590
NC_015978.1	GeneMarkS-2+	CDS	1120585	1120782	.	-	0	ID=cds-WP_014082400.1;Parent=gene-LSA_RS05870;Dbxref=Genbank:WP_014082400.1;Name=WP_014082400.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS05870;product=hypothetical protein;protein_id=WP_014082400.1;transl_table=11
NC_015978.1	RefSeq	gene	1121035	1121700	.	-	.	ID=gene-LSA_RS05875;Name=LSA_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05875;old_locus_tag=LSA_11600
NC_015978.1	Protein Homology	CDS	1121035	1121700	.	-	0	ID=cds-WP_014082401.1;Parent=gene-LSA_RS05875;Dbxref=Genbank:WP_014082401.1;Name=WP_014082401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022685.1;locus_tag=LSA_RS05875;product=phosphatase PAP2 family protein;protein_id=WP_014082401.1;transl_table=11
NC_015978.1	RefSeq	gene	1121822	1122667	.	+	.	ID=gene-LSA_RS05880;Name=LSA_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05880;old_locus_tag=LSA_11610
NC_015978.1	Protein Homology	CDS	1121822	1122667	.	+	0	ID=cds-WP_041817933.1;Parent=gene-LSA_RS05880;Dbxref=Genbank:WP_041817933.1;Name=WP_041817933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003644203.1;locus_tag=LSA_RS05880;product=sulfite exporter TauE/SafE family protein;protein_id=WP_041817933.1;transl_table=11
NC_015978.1	RefSeq	gene	1122667	1123041	.	+	.	ID=gene-LSA_RS05885;Name=LSA_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05885;old_locus_tag=LSA_11620
NC_015978.1	Protein Homology	CDS	1122667	1123041	.	+	0	ID=cds-WP_014082403.1;Parent=gene-LSA_RS05885;Dbxref=Genbank:WP_014082403.1;Name=WP_014082403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008855837.1;locus_tag=LSA_RS05885;product=DUF1634 domain-containing protein;protein_id=WP_014082403.1;transl_table=11
NC_015978.1	RefSeq	gene	1123113	1123967	.	-	.	ID=gene-LSA_RS05890;Name=LSA_RS05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05890;old_locus_tag=LSA_11630
NC_015978.1	Protein Homology	CDS	1123113	1123967	.	-	0	ID=cds-WP_041817666.1-3;Parent=gene-LSA_RS05890;Dbxref=Genbank:WP_041817666.1;Name=WP_041817666.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033516.0;locus_tag=LSA_RS05890;product=IS3 family transposase;protein_id=WP_041817666.1;transl_table=11
NC_015978.1	RefSeq	gene	1123967	1124470	.	-	.	ID=gene-LSA_RS05895;Name=LSA_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05895;old_locus_tag=LSA_11640
NC_015978.1	Protein Homology	CDS	1123967	1124470	.	-	0	ID=cds-WP_041817664.1-3;Parent=gene-LSA_RS05895;Dbxref=Genbank:WP_041817664.1;Name=WP_041817664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014082299.1;locus_tag=LSA_RS05895;product=helix-turn-helix domain-containing protein;protein_id=WP_041817664.1;transl_table=11
NC_015978.1	RefSeq	gene	1124547	1124915	.	-	.	ID=gene-LSA_RS05900;Name=LSA_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05900;old_locus_tag=LSA_11650
NC_015978.1	GeneMarkS-2+	CDS	1124547	1124915	.	-	0	ID=cds-WP_014082404.1;Parent=gene-LSA_RS05900;Dbxref=Genbank:WP_014082404.1;Name=WP_014082404.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS05900;product=hypothetical protein;protein_id=WP_014082404.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	1125023	1126216	.	+	.	ID=gene-LSA_RS05905;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=pseudogene;locus_tag=LSA_RS05905;old_locus_tag=LSA_11660;partial=true;pseudo=true;start_range=.,1125023
NC_015978.1	Protein Homology	CDS	1125023	1126216	.	+	0	ID=cds-LSA_RS05905;Parent=gene-LSA_RS05905;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006508,GO:0045148;gbkey=CDS;gene=pepT;go_function=tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010021393.1;locus_tag=LSA_RS05905;partial=true;product=peptidase T;pseudo=true;start_range=.,1125023;transl_table=11
NC_015978.1	RefSeq	pseudogene	1126258	1127490	.	-	.	ID=gene-LSA_RS05910;Name=LSA_RS05910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS05910;pseudo=true
NC_015978.1	Protein Homology	CDS	1126258	1127490	.	-	0	ID=cds-LSA_RS05910;Parent=gene-LSA_RS05910;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015473509.1;locus_tag=LSA_RS05910;product=serine hydroxymethyltransferase;pseudo=true;transl_table=11
NC_015978.1	RefSeq	gene	1127785	1128120	.	-	.	ID=gene-LSA_RS05915;Name=LSA_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05915;old_locus_tag=LSA_11680
NC_015978.1	Protein Homology	CDS	1127785	1128120	.	-	0	ID=cds-WP_014082406.1;Parent=gene-LSA_RS05915;Dbxref=Genbank:WP_014082406.1;Name=WP_014082406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022617.1;locus_tag=LSA_RS05915;product=hypothetical protein;protein_id=WP_014082406.1;transl_table=11
NC_015978.1	RefSeq	gene	1128209	1130035	.	+	.	ID=gene-LSA_RS05920;Name=LSA_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05920;old_locus_tag=LSA_11690
NC_015978.1	Protein Homology	CDS	1128209	1130035	.	+	0	ID=cds-WP_014082407.1;Parent=gene-LSA_RS05920;Dbxref=Genbank:WP_014082407.1;Name=WP_014082407.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024846.2;locus_tag=LSA_RS05920;product=FAD/NAD(P)-binding protein;protein_id=WP_014082407.1;transl_table=11
NC_015978.1	RefSeq	gene	1130094	1130294	.	+	.	ID=gene-LSA_RS05925;Name=LSA_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05925;old_locus_tag=LSA_11700
NC_015978.1	Protein Homology	CDS	1130094	1130294	.	+	0	ID=cds-WP_014082408.1;Parent=gene-LSA_RS05925;Dbxref=Genbank:WP_014082408.1;Name=WP_014082408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022611.1;locus_tag=LSA_RS05925;product=LBP_cg2779 family protein;protein_id=WP_014082408.1;transl_table=11
NC_015978.1	RefSeq	gene	1130410	1130835	.	-	.	ID=gene-LSA_RS05930;Name=LSA_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05930;old_locus_tag=LSA_11710
NC_015978.1	GeneMarkS-2+	CDS	1130410	1130835	.	-	0	ID=cds-WP_144011138.1;Parent=gene-LSA_RS05930;Dbxref=Genbank:WP_144011138.1;Name=WP_144011138.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS05930;product=hypothetical protein;protein_id=WP_144011138.1;transl_table=11
NC_015978.1	RefSeq	gene	1130951	1131580	.	-	.	ID=gene-LSA_RS05935;Name=LSA_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05935;old_locus_tag=LSA_11720
NC_015978.1	Protein Homology	CDS	1130951	1131580	.	-	0	ID=cds-WP_014082409.1;Parent=gene-LSA_RS05935;Dbxref=Genbank:WP_014082409.1;Name=WP_014082409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022580.1;locus_tag=LSA_RS05935;product=DNA-3-methyladenine glycosylase;protein_id=WP_014082409.1;transl_table=11
NC_015978.1	RefSeq	gene	1131596	1132042	.	-	.	ID=gene-LSA_RS05940;Name=LSA_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05940;old_locus_tag=LSA_11730
NC_015978.1	Protein Homology	CDS	1131596	1132042	.	-	0	ID=cds-WP_014082410.1;Parent=gene-LSA_RS05940;Dbxref=Genbank:WP_014082410.1;Name=WP_014082410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167043.1;locus_tag=LSA_RS05940;product=universal stress protein;protein_id=WP_014082410.1;transl_table=11
NC_015978.1	RefSeq	gene	1132282	1132449	.	+	.	ID=gene-LSA_RS07475;Name=LSA_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07475;old_locus_tag=LSA_11740
NC_015978.1	Protein Homology	CDS	1132282	1132449	.	+	0	ID=cds-WP_081462423.1;Parent=gene-LSA_RS07475;Dbxref=Genbank:WP_081462423.1;Name=WP_081462423.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021378.2;locus_tag=LSA_RS07475;product=SHOCT domain-containing protein;protein_id=WP_081462423.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	1132525	1132941	.	-	.	ID=gene-LSA_RS05945;Name=LSA_RS05945;end_range=1132941,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS05945;old_locus_tag=LSA_11750;partial=true;pseudo=true
NC_015978.1	Protein Homology	CDS	1132525	1132941	.	-	0	ID=cds-LSA_RS05945;Parent=gene-LSA_RS05945;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005524;end_range=1132941,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=LSA_RS05945;partial=true;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11
NC_015978.1	RefSeq	gene	1132997	1133467	.	-	.	ID=gene-LSA_RS07640;Name=LSA_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07640;old_locus_tag=LSA_11760
NC_015978.1	Protein Homology	CDS	1132997	1133467	.	-	0	ID=cds-WP_258027363.1;Parent=gene-LSA_RS07640;Dbxref=Genbank:WP_258027363.1;Name=WP_258027363.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012870.2;locus_tag=LSA_RS07640;product=IS3 family transposase;protein_id=WP_258027363.1;transl_table=11
NC_015978.1	RefSeq	gene	1133572	1133850	.	-	.	ID=gene-LSA_RS07645;Name=LSA_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07645;old_locus_tag=LSA_11770
NC_015978.1	Protein Homology	CDS	1133572	1133850	.	-	0	ID=cds-WP_144011140.1;Parent=gene-LSA_RS07645;Dbxref=Genbank:WP_144011140.1;Name=WP_144011140.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024673.2;locus_tag=LSA_RS07645;product=IS3 family transposase;protein_id=WP_144011140.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	1133850	1134071	.	-	.	ID=gene-LSA_RS07480;Name=LSA_RS07480;end_range=1134071,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS07480;partial=true;pseudo=true
NC_015978.1	Protein Homology	CDS	1133850	1134071	.	-	0	ID=cds-LSA_RS07480;Parent=gene-LSA_RS07480;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1134071,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014082612.1;locus_tag=LSA_RS07480;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
NC_015978.1	RefSeq	gene	1134164	1135753	.	-	.	ID=gene-LSA_RS05960;Name=LSA_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05960;old_locus_tag=LSA_11780
NC_015978.1	Protein Homology	CDS	1134164	1135753	.	-	0	ID=cds-WP_081462424.1;Parent=gene-LSA_RS05960;Dbxref=Genbank:WP_081462424.1;Name=WP_081462424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010621235.1;locus_tag=LSA_RS05960;product=BCCT family transporter;protein_id=WP_081462424.1;transl_table=11
NC_015978.1	RefSeq	gene	1135925	1136494	.	-	.	ID=gene-LSA_RS05965;Name=LSA_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05965;old_locus_tag=LSA_11790
NC_015978.1	Protein Homology	CDS	1135925	1136494	.	-	0	ID=cds-WP_041817936.1;Parent=gene-LSA_RS05965;Dbxref=Genbank:WP_041817936.1;Name=WP_041817936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167041.1;locus_tag=LSA_RS05965;product=sugar O-acetyltransferase;protein_id=WP_041817936.1;transl_table=11
NC_015978.1	RefSeq	gene	1136505	1137194	.	-	.	ID=gene-LSA_RS05970;Name=LSA_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05970;old_locus_tag=LSA_11800
NC_015978.1	Protein Homology	CDS	1136505	1137194	.	-	0	ID=cds-WP_041818141.1;Parent=gene-LSA_RS05970;Dbxref=Genbank:WP_041818141.1;Name=WP_041818141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022575.1;locus_tag=LSA_RS05970;product=ribonuclease H family protein;protein_id=WP_041818141.1;transl_table=11
NC_015978.1	RefSeq	gene	1137313	1137753	.	+	.	ID=gene-LSA_RS05975;Name=LSA_RS05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05975;old_locus_tag=LSA_11810
NC_015978.1	Protein Homology	CDS	1137313	1137753	.	+	0	ID=cds-WP_014082414.1;Parent=gene-LSA_RS05975;Dbxref=Genbank:WP_014082414.1;Name=WP_014082414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167039.1;locus_tag=LSA_RS05975;product=hypothetical protein;protein_id=WP_014082414.1;transl_table=11
NC_015978.1	RefSeq	gene	1137827	1137949	.	-	.	ID=gene-LSA_RS07940;Name=LSA_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07940;old_locus_tag=LSA_11820
NC_015978.1	Protein Homology	CDS	1137827	1137949	.	-	0	ID=cds-WP_014082415.1;Parent=gene-LSA_RS07940;Dbxref=Genbank:WP_014082415.1;Name=WP_014082415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008858184.1;locus_tag=LSA_RS07940;product=hypothetical protein;protein_id=WP_014082415.1;transl_table=11
NC_015978.1	RefSeq	gene	1138067	1138864	.	+	.	ID=gene-LSA_RS05980;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=LSA_RS05980;old_locus_tag=LSA_11830
NC_015978.1	Protein Homology	CDS	1138067	1138864	.	+	0	ID=cds-WP_014082416.1;Parent=gene-LSA_RS05980;Dbxref=Genbank:WP_014082416.1;Name=WP_014082416.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013728815.1;locus_tag=LSA_RS05980;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_014082416.1;transl_table=11
NC_015978.1	RefSeq	gene	1138930	1139106	.	-	.	ID=gene-LSA_RS07775;Name=LSA_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07775;old_locus_tag=LSA_11840
NC_015978.1	Protein Homology	CDS	1138930	1139106	.	-	0	ID=cds-WP_014082417.1;Parent=gene-LSA_RS07775;Dbxref=Genbank:WP_014082417.1;Name=WP_014082417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014215962.1;locus_tag=LSA_RS07775;product=hypothetical protein;protein_id=WP_014082417.1;transl_table=11
NC_015978.1	RefSeq	gene	1139108	1139794	.	-	.	ID=gene-LSA_RS05985;Name=LSA_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05985;old_locus_tag=LSA_11850
NC_015978.1	Protein Homology	CDS	1139108	1139794	.	-	0	ID=cds-WP_041818142.1;Parent=gene-LSA_RS05985;Dbxref=Genbank:WP_041818142.1;Name=WP_041818142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022561.1;locus_tag=LSA_RS05985;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_041818142.1;transl_table=11
NC_015978.1	RefSeq	gene	1140025	1140228	.	+	.	ID=gene-LSA_RS05990;Name=LSA_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05990;old_locus_tag=LSA_11860
NC_015978.1	Protein Homology	CDS	1140025	1140228	.	+	0	ID=cds-WP_041817938.1;Parent=gene-LSA_RS05990;Dbxref=Genbank:WP_041817938.1;Name=WP_041817938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008212794.1;locus_tag=LSA_RS05990;product=cold-shock protein;protein_id=WP_041817938.1;transl_table=11
NC_015978.1	RefSeq	gene	1140470	1140673	.	+	.	ID=gene-LSA_RS05995;Name=LSA_RS05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS05995;old_locus_tag=LSA_11870
NC_015978.1	Protein Homology	CDS	1140470	1140673	.	+	0	ID=cds-WP_041817938.1-2;Parent=gene-LSA_RS05995;Dbxref=Genbank:WP_041817938.1;Name=WP_041817938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008212794.1;locus_tag=LSA_RS05995;product=cold-shock protein;protein_id=WP_041817938.1;transl_table=11
NC_015978.1	RefSeq	gene	1140784	1141323	.	-	.	ID=gene-LSA_RS06000;Name=LSA_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06000;old_locus_tag=LSA_11880
NC_015978.1	Protein Homology	CDS	1140784	1141323	.	-	0	ID=cds-WP_014082420.1;Parent=gene-LSA_RS06000;Dbxref=Genbank:WP_014082420.1;Name=WP_014082420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167054.1;locus_tag=LSA_RS06000;product=TetR/AcrR family transcriptional regulator;protein_id=WP_014082420.1;transl_table=11
NC_015978.1	RefSeq	gene	1141339	1142091	.	-	.	ID=gene-LSA_RS06005;Name=LSA_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06005;old_locus_tag=LSA_11890
NC_015978.1	Protein Homology	CDS	1141339	1142091	.	-	0	ID=cds-WP_014082421.1;Parent=gene-LSA_RS06005;Dbxref=Genbank:WP_014082421.1;Name=WP_014082421.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;go_function=biotin-[acetyl-CoA-carboxylase] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: protein motif:HMM:TIGR00121.1;locus_tag=LSA_RS06005;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=WP_014082421.1;transl_table=11
NC_015978.1	RefSeq	gene	1142094	1142855	.	-	.	ID=gene-LSA_RS06010;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=LSA_RS06010;old_locus_tag=LSA_11900
NC_015978.1	Protein Homology	CDS	1142094	1142855	.	-	0	ID=cds-WP_041817939.1;Parent=gene-LSA_RS06010;Dbxref=Genbank:WP_041817939.1;Name=WP_041817939.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167056.1;locus_tag=LSA_RS06010;product=enoyl-ACP reductase FabI;protein_id=WP_041817939.1;transl_table=11
NC_015978.1	RefSeq	gene	1142921	1143691	.	-	.	ID=gene-LSA_RS06015;Name=LSA_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06015;old_locus_tag=LSA_11910
NC_015978.1	Protein Homology	CDS	1142921	1143691	.	-	0	ID=cds-WP_014082423.1;Parent=gene-LSA_RS06015;Dbxref=Genbank:WP_014082423.1;Name=WP_014082423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167057.1;locus_tag=LSA_RS06015;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_014082423.1;transl_table=11
NC_015978.1	RefSeq	gene	1143684	1144520	.	-	.	ID=gene-LSA_RS06020;Name=LSA_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06020;old_locus_tag=LSA_11920
NC_015978.1	Protein Homology	CDS	1143684	1144520	.	-	0	ID=cds-WP_014082424.1;Parent=gene-LSA_RS06020;Dbxref=Genbank:WP_014082424.1;Name=WP_014082424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167058.1;locus_tag=LSA_RS06020;product=hypothetical protein;protein_id=WP_014082424.1;transl_table=11
NC_015978.1	RefSeq	gene	1144510	1145880	.	-	.	ID=gene-LSA_RS06025;Name=LSA_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06025;old_locus_tag=LSA_11930
NC_015978.1	Protein Homology	CDS	1144510	1145880	.	-	0	ID=cds-WP_014082425.1;Parent=gene-LSA_RS06025;Dbxref=Genbank:WP_014082425.1;Name=WP_014082425.1;Ontology_term=GO:0005524,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022524.1;locus_tag=LSA_RS06025;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_014082425.1;transl_table=11
NC_015978.1	RefSeq	gene	1145889	1146299	.	-	.	ID=gene-LSA_RS06030;Name=LSA_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06030;old_locus_tag=LSA_11940
NC_015978.1	Protein Homology	CDS	1145889	1146299	.	-	0	ID=cds-WP_041817940.1;Parent=gene-LSA_RS06030;Dbxref=Genbank:WP_041817940.1;Name=WP_041817940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003625250.1;locus_tag=LSA_RS06030;product=beta-hydroxyacyl-ACP dehydratase;protein_id=WP_041817940.1;transl_table=11
NC_015978.1	RefSeq	gene	1146301	1146726	.	-	.	ID=gene-LSA_RS06035;Name=LSA_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06035;old_locus_tag=LSA_11950
NC_015978.1	Protein Homology	CDS	1146301	1146726	.	-	0	ID=cds-WP_014082427.1;Parent=gene-LSA_RS06035;Dbxref=Genbank:WP_014082427.1;Name=WP_014082427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167061.1;locus_tag=LSA_RS06035;product=acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;protein_id=WP_014082427.1;transl_table=11
NC_015978.1	RefSeq	gene	1146726	1147967	.	-	.	ID=gene-LSA_RS06040;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=LSA_RS06040;old_locus_tag=LSA_11960
NC_015978.1	Protein Homology	CDS	1146726	1147967	.	-	0	ID=cds-WP_014082428.1;Parent=gene-LSA_RS06040;Dbxref=Genbank:WP_014082428.1;Name=WP_014082428.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022534.1;locus_tag=LSA_RS06040;product=beta-ketoacyl-ACP synthase II;protein_id=WP_014082428.1;transl_table=11
NC_015978.1	RefSeq	gene	1147993	1148730	.	-	.	ID=gene-LSA_RS06045;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=LSA_RS06045;old_locus_tag=LSA_11970
NC_015978.1	Protein Homology	CDS	1147993	1148730	.	-	0	ID=cds-WP_041817941.1;Parent=gene-LSA_RS06045;Dbxref=Genbank:WP_041817941.1;Name=WP_041817941.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fabG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014940305.1;locus_tag=LSA_RS06045;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_041817941.1;transl_table=11
NC_015978.1	RefSeq	gene	1148730	1149647	.	-	.	ID=gene-LSA_RS06050;Name=LSA_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06050;old_locus_tag=LSA_11980
NC_015978.1	Protein Homology	CDS	1148730	1149647	.	-	0	ID=cds-WP_014082430.1;Parent=gene-LSA_RS06050;Dbxref=Genbank:WP_014082430.1;Name=WP_014082430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004466930.1;locus_tag=LSA_RS06050;product=ACP S-malonyltransferase;protein_id=WP_014082430.1;transl_table=11
NC_015978.1	RefSeq	gene	1149662	1149916	.	-	.	ID=gene-LSA_RS06055;Name=LSA_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06055;old_locus_tag=LSA_11990
NC_015978.1	Protein Homology	CDS	1149662	1149916	.	-	0	ID=cds-WP_014082431.1;Parent=gene-LSA_RS06055;Dbxref=Genbank:WP_014082431.1;Name=WP_014082431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022532.1;locus_tag=LSA_RS06055;product=acyl carrier protein;protein_id=WP_014082431.1;transl_table=11
NC_015978.1	RefSeq	gene	1149946	1150920	.	-	.	ID=gene-LSA_RS06060;Name=LSA_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06060;old_locus_tag=LSA_12000
NC_015978.1	Protein Homology	CDS	1149946	1150920	.	-	0	ID=cds-WP_041817943.1;Parent=gene-LSA_RS06060;Dbxref=Genbank:WP_041817943.1;Name=WP_041817943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022514.1;locus_tag=LSA_RS06060;product=ketoacyl-ACP synthase III;protein_id=WP_041817943.1;transl_table=11
NC_015978.1	RefSeq	gene	1150923	1151369	.	-	.	ID=gene-LSA_RS06065;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=LSA_RS06065;old_locus_tag=LSA_12010
NC_015978.1	Protein Homology	CDS	1150923	1151369	.	-	0	ID=cds-WP_014082433.1;Parent=gene-LSA_RS06065;Dbxref=Genbank:WP_014082433.1;Name=WP_014082433.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167065.1;locus_tag=LSA_RS06065;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_014082433.1;transl_table=11
NC_015978.1	RefSeq	gene	1151614	1151784	.	-	.	ID=gene-LSA_RS07780;Name=LSA_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07780;old_locus_tag=LSA_12020
NC_015978.1	GeneMarkS-2+	CDS	1151614	1151784	.	-	0	ID=cds-WP_014082434.1;Parent=gene-LSA_RS07780;Dbxref=Genbank:WP_014082434.1;Name=WP_014082434.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS07780;product=hypothetical protein;protein_id=WP_014082434.1;transl_table=11
NC_015978.1	RefSeq	gene	1152046	1152945	.	+	.	ID=gene-LSA_RS06070;Name=LSA_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06070;old_locus_tag=LSA_12030
NC_015978.1	Protein Homology	CDS	1152046	1152945	.	+	0	ID=cds-WP_014082435.1;Parent=gene-LSA_RS06070;Dbxref=Genbank:WP_014082435.1;Name=WP_014082435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167067.1;locus_tag=LSA_RS06070;product=membrane protein;protein_id=WP_014082435.1;transl_table=11
NC_015978.1	RefSeq	gene	1152994	1154379	.	-	.	ID=gene-LSA_RS06075;Name=LSA_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06075;old_locus_tag=LSA_12040
NC_015978.1	Protein Homology	CDS	1152994	1154379	.	-	0	ID=cds-WP_014082436.1;Parent=gene-LSA_RS06075;Dbxref=Genbank:WP_014082436.1;Name=WP_014082436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014940777.1;locus_tag=LSA_RS06075;product=class II fumarate hydratase;protein_id=WP_014082436.1;transl_table=11
NC_015978.1	RefSeq	gene	1154658	1155920	.	+	.	ID=gene-LSA_RS06080;Name=LSA_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06080;old_locus_tag=LSA_12050
NC_015978.1	Protein Homology	CDS	1154658	1155920	.	+	0	ID=cds-WP_014082437.1;Parent=gene-LSA_RS06080;Dbxref=Genbank:WP_014082437.1;Name=WP_014082437.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167071.1;locus_tag=LSA_RS06080;product=adenylosuccinate synthase;protein_id=WP_014082437.1;transl_table=11
NC_015978.1	RefSeq	gene	1155974	1156552	.	-	.	ID=gene-LSA_RS06085;Name=LSA_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06085;old_locus_tag=LSA_12060
NC_015978.1	Protein Homology	CDS	1155974	1156552	.	-	0	ID=cds-WP_014082438.1;Parent=gene-LSA_RS06085;Dbxref=Genbank:WP_014082438.1;Name=WP_014082438.1;Ontology_term=GO:0000287,GO:0008897;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167072.1;locus_tag=LSA_RS06085;product=4'-phosphopantetheinyl transferase superfamily protein;protein_id=WP_014082438.1;transl_table=11
NC_015978.1	RefSeq	gene	1156573	1156827	.	-	.	ID=gene-LSA_RS06090;Name=LSA_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06090;old_locus_tag=LSA_12070
NC_015978.1	Protein Homology	CDS	1156573	1156827	.	-	0	ID=cds-WP_014082439.1;Parent=gene-LSA_RS06090;Dbxref=Genbank:WP_014082439.1;Name=WP_014082439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167073.1;locus_tag=LSA_RS06090;product=acyl carrier protein;protein_id=WP_014082439.1;transl_table=11
NC_015978.1	RefSeq	gene	1156907	1158022	.	-	.	ID=gene-LSA_RS06095;Name=LSA_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06095;old_locus_tag=LSA_12080
NC_015978.1	Protein Homology	CDS	1156907	1158022	.	-	0	ID=cds-WP_041817945.1;Parent=gene-LSA_RS06095;Dbxref=Genbank:WP_041817945.1;Name=WP_041817945.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019474.2;locus_tag=LSA_RS06095;product=alpha/beta hydrolase fold domain-containing protein;protein_id=WP_041817945.1;transl_table=11
NC_015978.1	RefSeq	gene	1158073	1158327	.	-	.	ID=gene-LSA_RS06100;Name=LSA_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06100;old_locus_tag=LSA_12090
NC_015978.1	GeneMarkS-2+	CDS	1158073	1158327	.	-	0	ID=cds-WP_014082441.1;Parent=gene-LSA_RS06100;Dbxref=Genbank:WP_014082441.1;Name=WP_014082441.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS06100;product=hypothetical protein;protein_id=WP_014082441.1;transl_table=11
NC_015978.1	RefSeq	gene	1158561	1159736	.	-	.	ID=gene-LSA_RS06105;Name=LSA_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06105;old_locus_tag=LSA_12100
NC_015978.1	Protein Homology	CDS	1158561	1159736	.	-	0	ID=cds-WP_014081724.1-2;Parent=gene-LSA_RS06105;Dbxref=Genbank:WP_014081724.1;Name=WP_014081724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003664510.1;locus_tag=LSA_RS06105;product=RNA-guided endonuclease TnpB family protein;protein_id=WP_014081724.1;transl_table=11
NC_015978.1	RefSeq	gene	1159736	1160134	.	-	.	ID=gene-LSA_RS06110;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LSA_RS06110;old_locus_tag=LSA_12110
NC_015978.1	Protein Homology	CDS	1159736	1160134	.	-	0	ID=cds-WP_014081459.1-7;Parent=gene-LSA_RS06110;Dbxref=Genbank:WP_014081459.1;Name=WP_014081459.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000762755.1;locus_tag=LSA_RS06110;product=IS200/IS605 family transposase;protein_id=WP_014081459.1;transl_table=11
NC_015978.1	RefSeq	gene	1160194	1160781	.	-	.	ID=gene-LSA_RS06115;Name=LSA_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06115;old_locus_tag=LSA_12120
NC_015978.1	GeneMarkS-2+	CDS	1160194	1160781	.	-	0	ID=cds-WP_041817946.1;Parent=gene-LSA_RS06115;Dbxref=Genbank:WP_041817946.1;Name=WP_041817946.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS06115;product=hypothetical protein;protein_id=WP_041817946.1;transl_table=11
NC_015978.1	RefSeq	gene	1160881	1161765	.	-	.	ID=gene-LSA_RS06120;Name=LSA_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06120;old_locus_tag=LSA_12130
NC_015978.1	Protein Homology	CDS	1160881	1161765	.	-	0	ID=cds-WP_014082442.1;Parent=gene-LSA_RS06120;Dbxref=Genbank:WP_014082442.1;Name=WP_014082442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167074.1;locus_tag=LSA_RS06120;product=aldo/keto reductase;protein_id=WP_014082442.1;transl_table=11
NC_015978.1	RefSeq	gene	1161811	1162989	.	-	.	ID=gene-LSA_RS06125;Name=LSA_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06125;old_locus_tag=LSA_12140
NC_015978.1	Protein Homology	CDS	1161811	1162989	.	-	0	ID=cds-WP_014082443.1;Parent=gene-LSA_RS06125;Dbxref=Genbank:WP_014082443.1;Name=WP_014082443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022502.1;locus_tag=LSA_RS06125;product=ABC transporter permease;protein_id=WP_014082443.1;transl_table=11
NC_015978.1	RefSeq	gene	1163064	1165205	.	-	.	ID=gene-LSA_RS06130;Name=LSA_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06130;old_locus_tag=LSA_12150
NC_015978.1	Protein Homology	CDS	1163064	1165205	.	-	0	ID=cds-WP_041817947.1;Parent=gene-LSA_RS06130;Dbxref=Genbank:WP_041817947.1;Name=WP_041817947.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013954.2;locus_tag=LSA_RS06130;product=SH3 domain-containing protein;protein_id=WP_041817947.1;transl_table=11
NC_015978.1	RefSeq	gene	1165411	1165878	.	+	.	ID=gene-LSA_RS06135;Name=LSA_RS06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06135;old_locus_tag=LSA_12160
NC_015978.1	Protein Homology	CDS	1165411	1165878	.	+	0	ID=cds-WP_014082444.1;Parent=gene-LSA_RS06135;Dbxref=Genbank:WP_014082444.1;Name=WP_014082444.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013842.2;locus_tag=LSA_RS06135;product=helix-turn-helix domain-containing protein;protein_id=WP_014082444.1;transl_table=11
NC_015978.1	RefSeq	gene	1165913	1166191	.	+	.	ID=gene-LSA_RS07650;Name=LSA_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07650;old_locus_tag=LSA_12170
NC_015978.1	Protein Homology	CDS	1165913	1166191	.	+	0	ID=cds-WP_144011141.1;Parent=gene-LSA_RS07650;Dbxref=Genbank:WP_144011141.1;Name=WP_144011141.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024673.2;locus_tag=LSA_RS07650;product=IS3 family transposase;protein_id=WP_144011141.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	1166207	1166767	.	+	.	ID=gene-LSA_RS07655;Name=LSA_RS07655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS07655;old_locus_tag=LSA_12180;partial=true;pseudo=true;start_range=.,1166207
NC_015978.1	Protein Homology	CDS	1166207	1166767	.	+	0	ID=cds-LSA_RS07655;Parent=gene-LSA_RS07655;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033516.0;locus_tag=LSA_RS07655;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1166207;transl_table=11
NC_015978.1	RefSeq	gene	1166858	1167889	.	-	.	ID=gene-LSA_RS06145;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=LSA_RS06145;old_locus_tag=LSA_12190
NC_015978.1	Protein Homology	CDS	1166858	1167889	.	-	0	ID=cds-WP_041817949.1;Parent=gene-LSA_RS06145;Dbxref=Genbank:WP_041817949.1;Name=WP_041817949.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022501.1;locus_tag=LSA_RS06145;product=alcohol dehydrogenase AdhP;protein_id=WP_041817949.1;transl_table=11
NC_015978.1	RefSeq	gene	1167996	1168628	.	-	.	ID=gene-LSA_RS06150;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=LSA_RS06150;old_locus_tag=LSA_12200
NC_015978.1	Protein Homology	CDS	1167996	1168628	.	-	0	ID=cds-WP_014082446.1;Parent=gene-LSA_RS06150;Dbxref=Genbank:WP_014082446.1;Name=WP_014082446.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014939394.1;locus_tag=LSA_RS06150;product=orotate phosphoribosyltransferase;protein_id=WP_014082446.1;transl_table=11
NC_015978.1	RefSeq	gene	1168639	1169355	.	-	.	ID=gene-LSA_RS06155;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=LSA_RS06155;old_locus_tag=LSA_12210
NC_015978.1	Protein Homology	CDS	1168639	1169355	.	-	0	ID=cds-WP_041817952.1;Parent=gene-LSA_RS06155;Dbxref=Genbank:WP_041817952.1;Name=WP_041817952.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022498.1;locus_tag=LSA_RS06155;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_041817952.1;transl_table=11
NC_015978.1	RefSeq	gene	1169638	1170873	.	+	.	ID=gene-LSA_RS06160;Name=LSA_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06160;old_locus_tag=LSA_12220
NC_015978.1	Protein Homology	CDS	1169638	1170873	.	+	0	ID=cds-WP_041817954.1;Parent=gene-LSA_RS06160;Dbxref=Genbank:WP_041817954.1;Name=WP_041817954.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166615.1;locus_tag=LSA_RS06160;product=MFS transporter;protein_id=WP_041817954.1;transl_table=11
NC_015978.1	RefSeq	gene	1170963	1171181	.	+	.	ID=gene-LSA_RS06165;Name=LSA_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06165;old_locus_tag=LSA_12230
NC_015978.1	Protein Homology	CDS	1170963	1171181	.	+	0	ID=cds-WP_014082449.1;Parent=gene-LSA_RS06165;Dbxref=Genbank:WP_014082449.1;Name=WP_014082449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006585818.1;locus_tag=LSA_RS06165;product=hypothetical protein;protein_id=WP_014082449.1;transl_table=11
NC_015978.1	RefSeq	gene	1171236	1171487	.	-	.	ID=gene-LSA_RS06170;Name=LSA_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06170;old_locus_tag=LSA_12240
NC_015978.1	GeneMarkS-2+	CDS	1171236	1171487	.	-	0	ID=cds-WP_014082450.1;Parent=gene-LSA_RS06170;Dbxref=Genbank:WP_014082450.1;Name=WP_014082450.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS06170;product=hypothetical protein;protein_id=WP_014082450.1;transl_table=11
NC_015978.1	RefSeq	gene	1171477	1172088	.	-	.	ID=gene-LSA_RS06175;Name=LSA_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06175;old_locus_tag=LSA_12250
NC_015978.1	GeneMarkS-2+	CDS	1171477	1172088	.	-	0	ID=cds-WP_041817955.1;Parent=gene-LSA_RS06175;Dbxref=Genbank:WP_041817955.1;Name=WP_041817955.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS06175;product=hypothetical protein;protein_id=WP_041817955.1;transl_table=11
NC_015978.1	RefSeq	gene	1172161	1173579	.	-	.	ID=gene-LSA_RS06180;Name=LSA_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06180;old_locus_tag=LSA_12260
NC_015978.1	Protein Homology	CDS	1172161	1173579	.	-	0	ID=cds-WP_014082451.1;Parent=gene-LSA_RS06180;Dbxref=Genbank:WP_014082451.1;Name=WP_014082451.1;Ontology_term=GO:0015837,GO:0005275,GO:0005887;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA;go_function=amine transmembrane transporter activity|0005275||IEA;go_process=amine transport|0015837||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022225.1;locus_tag=LSA_RS06180;product=basic amino acid/polyamine antiporter;protein_id=WP_014082451.1;transl_table=11
NC_015978.1	RefSeq	gene	1173709	1174635	.	-	.	ID=gene-LSA_RS06185;Name=LSA_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06185;old_locus_tag=LSA_12270
NC_015978.1	Protein Homology	CDS	1173709	1174635	.	-	0	ID=cds-WP_049777621.1;Parent=gene-LSA_RS06185;Dbxref=Genbank:WP_049777621.1;Name=WP_049777621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166614.1;locus_tag=LSA_RS06185;product=DMT family transporter;protein_id=WP_049777621.1;transl_table=11
NC_015978.1	RefSeq	gene	1174649	1174969	.	-	.	ID=gene-LSA_RS06190;Name=LSA_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06190;old_locus_tag=LSA_12280
NC_015978.1	Protein Homology	CDS	1174649	1174969	.	-	0	ID=cds-WP_014082453.1;Parent=gene-LSA_RS06190;Dbxref=Genbank:WP_014082453.1;Name=WP_014082453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011668628.1;locus_tag=LSA_RS06190;product=hypothetical protein;protein_id=WP_014082453.1;transl_table=11
NC_015978.1	RefSeq	gene	1174979	1175914	.	-	.	ID=gene-LSA_RS06195;Name=LSA_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06195;old_locus_tag=LSA_12290
NC_015978.1	Protein Homology	CDS	1174979	1175914	.	-	0	ID=cds-WP_103434634.1;Parent=gene-LSA_RS06195;Dbxref=Genbank:WP_103434634.1;Name=WP_103434634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022491.1;locus_tag=LSA_RS06195;product=DMT family transporter;protein_id=WP_103434634.1;transl_table=11
NC_015978.1	RefSeq	gene	1176016	1178718	.	-	.	ID=gene-LSA_RS06200;Name=LSA_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06200;old_locus_tag=LSA_12300
NC_015978.1	Protein Homology	CDS	1176016	1178718	.	-	0	ID=cds-WP_041817956.1;Parent=gene-LSA_RS06200;Dbxref=Genbank:WP_041817956.1;Name=WP_041817956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011673011.1;locus_tag=LSA_RS06200;product=MMPL family transporter;protein_id=WP_041817956.1;transl_table=11
NC_015978.1	RefSeq	gene	1178711	1179340	.	-	.	ID=gene-LSA_RS06205;Name=LSA_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06205;old_locus_tag=LSA_12310
NC_015978.1	Protein Homology	CDS	1178711	1179340	.	-	0	ID=cds-WP_014082456.1;Parent=gene-LSA_RS06205;Dbxref=Genbank:WP_014082456.1;Name=WP_014082456.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025636.2;locus_tag=LSA_RS06205;product=TetR/AcrR family transcriptional regulator;protein_id=WP_014082456.1;transl_table=11
NC_015978.1	RefSeq	gene	1179460	1180452	.	-	.	ID=gene-LSA_RS06210;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=LSA_RS06210;old_locus_tag=LSA_12320
NC_015978.1	Protein Homology	CDS	1179460	1180452	.	-	0	ID=cds-WP_041817957.1;Parent=gene-LSA_RS06210;Dbxref=Genbank:WP_041817957.1;Name=WP_041817957.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003678594.1;locus_tag=LSA_RS06210;product=UDP-glucose 4-epimerase GalE;protein_id=WP_041817957.1;transl_table=11
NC_015978.1	RefSeq	gene	1180623	1182362	.	+	.	ID=gene-LSA_RS06215;Name=LSA_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06215;old_locus_tag=LSA_12330
NC_015978.1	Protein Homology	CDS	1180623	1182362	.	+	0	ID=cds-WP_041817958.1;Parent=gene-LSA_RS06215;Dbxref=Genbank:WP_041817958.1;Name=WP_041817958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022480.1;locus_tag=LSA_RS06215;product=phospho-sugar mutase;protein_id=WP_041817958.1;transl_table=11
NC_015978.1	RefSeq	gene	1182507	1183859	.	+	.	ID=gene-LSA_RS06220;Name=LSA_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06220;old_locus_tag=LSA_12340
NC_015978.1	Protein Homology	CDS	1182507	1183859	.	+	0	ID=cds-WP_081462426.1;Parent=gene-LSA_RS06220;Dbxref=Genbank:WP_081462426.1;Name=WP_081462426.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166601.1;locus_tag=LSA_RS06220;product=AAA family ATPase;protein_id=WP_081462426.1;transl_table=11
NC_015978.1	RefSeq	gene	1183952	1184887	.	+	.	ID=gene-LSA_RS07300;Name=LSA_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07300;old_locus_tag=LSA_12350
NC_015978.1	Protein Homology	CDS	1183952	1184887	.	+	0	ID=cds-WP_049777622.1;Parent=gene-LSA_RS07300;Dbxref=Genbank:WP_049777622.1;Name=WP_049777622.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003639589.1;locus_tag=LSA_RS07300;product=MFS transporter;protein_id=WP_049777622.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	1184874	1186101	.	+	.	ID=gene-LSA_RS06230;Name=LSA_RS06230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS06230;old_locus_tag=LSA_12360;pseudo=true
NC_015978.1	Protein Homology	CDS	1184874	1186101	.	+	0	ID=cds-LSA_RS06230;Parent=gene-LSA_RS06230;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003714816.1;locus_tag=LSA_RS06230;product=DUF2075 domain-containing protein;pseudo=true;transl_table=11
NC_015978.1	RefSeq	gene	1186458	1187117	.	-	.	ID=gene-LSA_RS06235;Name=LSA_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06235;old_locus_tag=LSA_12380
NC_015978.1	Protein Homology	CDS	1186458	1187117	.	-	0	ID=cds-WP_014082461.1;Parent=gene-LSA_RS06235;Dbxref=Genbank:WP_014082461.1;Name=WP_014082461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166594.1;locus_tag=LSA_RS06235;product=histidine phosphatase family protein;protein_id=WP_014082461.1;transl_table=11
NC_015978.1	RefSeq	gene	1187127	1189709	.	-	.	ID=gene-LSA_RS06240;Name=LSA_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06240;old_locus_tag=LSA_12390
NC_015978.1	Protein Homology	CDS	1187127	1189709	.	-	0	ID=cds-WP_014082462.1;Parent=gene-LSA_RS06240;Dbxref=Genbank:WP_014082462.1;Name=WP_014082462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022458.1;locus_tag=LSA_RS06240;product=YfhO family protein;protein_id=WP_014082462.1;transl_table=11
NC_015978.1	RefSeq	gene	1189861	1190382	.	+	.	ID=gene-LSA_RS06245;Name=LSA_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06245;old_locus_tag=LSA_12400
NC_015978.1	Protein Homology	CDS	1189861	1190382	.	+	0	ID=cds-WP_014082463.1;Parent=gene-LSA_RS06245;Dbxref=Genbank:WP_014082463.1;Name=WP_014082463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166592.1;locus_tag=LSA_RS06245;product=DUF308 domain-containing protein;protein_id=WP_014082463.1;transl_table=11
NC_015978.1	RefSeq	gene	1190459	1191406	.	+	.	ID=gene-LSA_RS06250;Name=LSA_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06250;old_locus_tag=LSA_12410
NC_015978.1	Protein Homology	CDS	1190459	1191406	.	+	0	ID=cds-WP_041817960.1;Parent=gene-LSA_RS06250;Dbxref=Genbank:WP_041817960.1;Name=WP_041817960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022454.1;locus_tag=LSA_RS06250;product=NAD(P)H-binding protein;protein_id=WP_041817960.1;transl_table=11
NC_015978.1	RefSeq	gene	1191508	1192047	.	+	.	ID=gene-LSA_RS06255;Name=LSA_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06255;old_locus_tag=LSA_12420
NC_015978.1	Protein Homology	CDS	1191508	1192047	.	+	0	ID=cds-WP_014082465.1;Parent=gene-LSA_RS06255;Dbxref=Genbank:WP_014082465.1;Name=WP_014082465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014081655.1;locus_tag=LSA_RS06255;product=helix-turn-helix domain-containing protein;protein_id=WP_014082465.1;transl_table=11
NC_015978.1	RefSeq	gene	1192059	1192907	.	+	.	ID=gene-LSA_RS06260;Name=LSA_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06260;old_locus_tag=LSA_12430
NC_015978.1	Protein Homology	CDS	1192059	1192907	.	+	0	ID=cds-WP_258027364.1;Parent=gene-LSA_RS06260;Dbxref=Genbank:WP_258027364.1;Name=WP_258027364.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033516.0;locus_tag=LSA_RS06260;product=IS3 family transposase;protein_id=WP_258027364.1;transl_table=11
NC_015978.1	RefSeq	gene	1192956	1194434	.	-	.	ID=gene-LSA_RS06265;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=LSA_RS06265;old_locus_tag=LSA_12440
NC_015978.1	Protein Homology	CDS	1192956	1194434	.	-	0	ID=cds-WP_014082467.1;Parent=gene-LSA_RS06265;Dbxref=Genbank:WP_014082467.1;Name=WP_014082467.1;Ontology_term=GO:0022857;gbkey=CDS;gene=yjeM;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010743261.1;locus_tag=LSA_RS06265;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=WP_014082467.1;transl_table=11
NC_015978.1	RefSeq	gene	1194470	1194997	.	-	.	ID=gene-LSA_RS06270;Name=LSA_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06270;old_locus_tag=LSA_12450
NC_015978.1	Protein Homology	CDS	1194470	1194997	.	-	0	ID=cds-WP_014082468.1;Parent=gene-LSA_RS06270;Dbxref=Genbank:WP_014082468.1;Name=WP_014082468.1;Ontology_term=GO:0006281,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166991.1;locus_tag=LSA_RS06270;product=MGMT family protein;protein_id=WP_014082468.1;transl_table=11
NC_015978.1	RefSeq	gene	1195098	1196897	.	-	.	ID=gene-LSA_RS06275;Name=LSA_RS06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06275;old_locus_tag=LSA_12460
NC_015978.1	Protein Homology	CDS	1195098	1196897	.	-	0	ID=cds-WP_014082469.1;Parent=gene-LSA_RS06275;Dbxref=Genbank:WP_014082469.1;Name=WP_014082469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166990.1;locus_tag=LSA_RS06275;product=MFS transporter;protein_id=WP_014082469.1;transl_table=11
NC_015978.1	RefSeq	gene	1196990	1197214	.	-	.	ID=gene-LSA_RS06280;Name=LSA_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06280;old_locus_tag=LSA_12470
NC_015978.1	Protein Homology	CDS	1196990	1197214	.	-	0	ID=cds-WP_014082470.1;Parent=gene-LSA_RS06280;Dbxref=Genbank:WP_014082470.1;Name=WP_014082470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166989.1;locus_tag=LSA_RS06280;product=hypothetical protein;protein_id=WP_014082470.1;transl_table=11
NC_015978.1	RefSeq	gene	1197230	1197835	.	-	.	ID=gene-LSA_RS06285;Name=LSA_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06285;old_locus_tag=LSA_12480
NC_015978.1	Protein Homology	CDS	1197230	1197835	.	-	0	ID=cds-WP_014082471.1;Parent=gene-LSA_RS06285;Dbxref=Genbank:WP_014082471.1;Name=WP_014082471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166988.1;locus_tag=LSA_RS06285;product=nitroreductase family protein;protein_id=WP_014082471.1;transl_table=11
NC_015978.1	RefSeq	gene	1197845	1198237	.	-	.	ID=gene-LSA_RS06290;Name=LSA_RS06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06290;old_locus_tag=LSA_12490
NC_015978.1	Protein Homology	CDS	1197845	1198237	.	-	0	ID=cds-WP_235803516.1;Parent=gene-LSA_RS06290;Dbxref=Genbank:WP_235803516.1;Name=WP_235803516.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014841.2;locus_tag=LSA_RS06290;product=hypothetical protein;protein_id=WP_235803516.1;transl_table=11
NC_015978.1	RefSeq	gene	1198377	1199375	.	-	.	ID=gene-LSA_RS06295;Name=LSA_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06295;old_locus_tag=LSA_12510
NC_015978.1	Protein Homology	CDS	1198377	1199375	.	-	0	ID=cds-WP_041817963.1;Parent=gene-LSA_RS06295;Dbxref=Genbank:WP_041817963.1;Name=WP_041817963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022422.1;locus_tag=LSA_RS06295;product=lactate dehydrogenase;protein_id=WP_041817963.1;transl_table=11
NC_015978.1	RefSeq	gene	1199458	1199862	.	-	.	ID=gene-LSA_RS07810;Name=LSA_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07810;old_locus_tag=LSA_12520
NC_015978.1	Protein Homology	CDS	1199458	1199862	.	-	0	ID=cds-WP_225361790.1;Parent=gene-LSA_RS07810;Dbxref=Genbank:WP_225361790.1;Name=WP_225361790.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021126.2;locus_tag=LSA_RS07810;product=YfhO family protein;protein_id=WP_225361790.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	1199954	1200157	.	+	.	ID=gene-LSA_RS07945;Name=LSA_RS07945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS07945;partial=true;pseudo=true;start_range=.,1199954
NC_015978.1	Protein Homology	CDS	1199954	1200157	.	+	0	ID=cds-LSA_RS07945;Parent=gene-LSA_RS07945;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004560356.1;locus_tag=LSA_RS07945;partial=true;product=transposase;pseudo=true;start_range=.,1199954;transl_table=11
NC_015978.1	RefSeq	gene	1200213	1201226	.	-	.	ID=gene-LSA_RS06305;Name=LSA_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06305;old_locus_tag=LSA_12530
NC_015978.1	GeneMarkS-2+	CDS	1200213	1201226	.	-	0	ID=cds-WP_014082475.1;Parent=gene-LSA_RS06305;Dbxref=Genbank:WP_014082475.1;Name=WP_014082475.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS06305;product=hypothetical protein;protein_id=WP_014082475.1;transl_table=11
NC_015978.1	RefSeq	gene	1201269	1201940	.	-	.	ID=gene-LSA_RS06310;Name=LSA_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06310;old_locus_tag=LSA_12540
NC_015978.1	Protein Homology	CDS	1201269	1201940	.	-	0	ID=cds-WP_041817966.1;Parent=gene-LSA_RS06310;Dbxref=Genbank:WP_041817966.1;Name=WP_041817966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010579687.1;locus_tag=LSA_RS06310;product=sugar transferase;protein_id=WP_041817966.1;transl_table=11
NC_015978.1	RefSeq	gene	1202067	1202816	.	-	.	ID=gene-LSA_RS06315;Name=LSA_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06315;old_locus_tag=LSA_12550
NC_015978.1	Protein Homology	CDS	1202067	1202816	.	-	0	ID=cds-WP_225361789.1;Parent=gene-LSA_RS06315;Dbxref=Genbank:WP_225361789.1;Name=WP_225361789.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014536.2;locus_tag=LSA_RS06315;product=glycosyltransferase;protein_id=WP_225361789.1;transl_table=11
NC_015978.1	RefSeq	gene	1203009	1204127	.	-	.	ID=gene-LSA_RS06320;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;locus_tag=LSA_RS06320;old_locus_tag=LSA_12560
NC_015978.1	Protein Homology	CDS	1203009	1204127	.	-	0	ID=cds-WP_014082478.1;Parent=gene-LSA_RS06320;Dbxref=Genbank:WP_014082478.1;Name=WP_014082478.1;Ontology_term=GO:0009273,GO:0008767;gbkey=CDS;gene=glf;go_function=UDP-galactopyranose mutase activity|0008767||IEA;go_process=peptidoglycan-based cell wall biogenesis|0009273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022412.1;locus_tag=LSA_RS06320;product=UDP-galactopyranose mutase;protein_id=WP_014082478.1;transl_table=11
NC_015978.1	RefSeq	gene	1204162	1205214	.	-	.	ID=gene-LSA_RS07305;Name=LSA_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07305;old_locus_tag=LSA_12570
NC_015978.1	Protein Homology	CDS	1204162	1205214	.	-	0	ID=cds-WP_014082479.1;Parent=gene-LSA_RS07305;Dbxref=Genbank:WP_014082479.1;Name=WP_014082479.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012744.2;locus_tag=LSA_RS07305;product=glycosyltransferase;protein_id=WP_014082479.1;transl_table=11
NC_015978.1	RefSeq	gene	1205234	1206202	.	-	.	ID=gene-LSA_RS06330;Name=LSA_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06330;old_locus_tag=LSA_12580
NC_015978.1	Protein Homology	CDS	1205234	1206202	.	-	0	ID=cds-WP_014082480.1;Parent=gene-LSA_RS06330;Dbxref=Genbank:WP_014082480.1;Name=WP_014082480.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.2;locus_tag=LSA_RS06330;product=glycosyltransferase;protein_id=WP_014082480.1;transl_table=11
NC_015978.1	RefSeq	gene	1206461	1206964	.	+	.	ID=gene-LSA_RS06335;Name=LSA_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06335;old_locus_tag=LSA_12590
NC_015978.1	Protein Homology	CDS	1206461	1206964	.	+	0	ID=cds-WP_041817664.1-4;Parent=gene-LSA_RS06335;Dbxref=Genbank:WP_041817664.1;Name=WP_041817664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014082299.1;locus_tag=LSA_RS06335;product=helix-turn-helix domain-containing protein;protein_id=WP_041817664.1;transl_table=11
NC_015978.1	RefSeq	gene	1206964	1207818	.	+	.	ID=gene-LSA_RS06340;Name=LSA_RS06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06340;old_locus_tag=LSA_12600
NC_015978.1	Protein Homology	CDS	1206964	1207818	.	+	0	ID=cds-WP_041817968.1;Parent=gene-LSA_RS06340;Dbxref=Genbank:WP_041817968.1;Name=WP_041817968.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033516.0;locus_tag=LSA_RS06340;product=IS3 family transposase;protein_id=WP_041817968.1;transl_table=11
NC_015978.1	RefSeq	gene	1207862	1209295	.	-	.	ID=gene-LSA_RS06345;Name=LSA_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06345;old_locus_tag=LSA_12610
NC_015978.1	Protein Homology	CDS	1207862	1209295	.	-	0	ID=cds-WP_041817969.1;Parent=gene-LSA_RS06345;Dbxref=Genbank:WP_041817969.1;Name=WP_041817969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166983.1;locus_tag=LSA_RS06345;product=polysaccharide biosynthesis C-terminal domain-containing protein;protein_id=WP_041817969.1;transl_table=11
NC_015978.1	RefSeq	gene	1209301	1210419	.	-	.	ID=gene-LSA_RS06350;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;locus_tag=LSA_RS06350;old_locus_tag=LSA_12620
NC_015978.1	Protein Homology	CDS	1209301	1210419	.	-	0	ID=cds-WP_014082483.1;Parent=gene-LSA_RS06350;Dbxref=Genbank:WP_014082483.1;Name=WP_014082483.1;Ontology_term=GO:0009273,GO:0008767;gbkey=CDS;gene=glf;go_function=UDP-galactopyranose mutase activity|0008767||IEA;go_process=peptidoglycan-based cell wall biogenesis|0009273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022412.1;locus_tag=LSA_RS06350;product=UDP-galactopyranose mutase;protein_id=WP_014082483.1;transl_table=11
NC_015978.1	RefSeq	gene	1210421	1211317	.	-	.	ID=gene-LSA_RS06355;Name=LSA_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06355;old_locus_tag=LSA_12630
NC_015978.1	Protein Homology	CDS	1210421	1211317	.	-	0	ID=cds-WP_014082484.1;Parent=gene-LSA_RS06355;Dbxref=Genbank:WP_014082484.1;Name=WP_014082484.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025025.2;locus_tag=LSA_RS06355;product=glycosyltransferase family 2 protein;protein_id=WP_014082484.1;transl_table=11
NC_015978.1	RefSeq	gene	1211410	1212195	.	-	.	ID=gene-LSA_RS06360;Name=LSA_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06360;old_locus_tag=LSA_12640
NC_015978.1	Protein Homology	CDS	1211410	1212195	.	-	0	ID=cds-WP_041818151.1;Parent=gene-LSA_RS06360;Dbxref=Genbank:WP_041818151.1;Name=WP_041818151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005723848.1;locus_tag=LSA_RS06360;product=DUF4422 domain-containing protein;protein_id=WP_041818151.1;transl_table=11
NC_015978.1	RefSeq	gene	1212326	1213516	.	-	.	ID=gene-LSA_RS06365;Name=LSA_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06365;old_locus_tag=LSA_12650
NC_015978.1	GeneMarkS-2+	CDS	1212326	1213516	.	-	0	ID=cds-WP_041817970.1;Parent=gene-LSA_RS06365;Dbxref=Genbank:WP_041817970.1;Name=WP_041817970.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS06365;product=hypothetical protein;protein_id=WP_041817970.1;transl_table=11
NC_015978.1	RefSeq	gene	1213520	1214128	.	-	.	ID=gene-LSA_RS06370;Name=LSA_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06370;old_locus_tag=LSA_12660
NC_015978.1	GeneMarkS-2+	CDS	1213520	1214128	.	-	0	ID=cds-WP_041817971.1;Parent=gene-LSA_RS06370;Dbxref=Genbank:WP_041817971.1;Name=WP_041817971.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS06370;product=hypothetical protein;protein_id=WP_041817971.1;transl_table=11
NC_015978.1	RefSeq	gene	1214150	1215148	.	-	.	ID=gene-LSA_RS06375;Name=LSA_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06375;old_locus_tag=LSA_12670
NC_015978.1	Protein Homology	CDS	1214150	1215148	.	-	0	ID=cds-WP_014082486.1;Parent=gene-LSA_RS06375;Dbxref=Genbank:WP_014082486.1;Name=WP_014082486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166979.1;locus_tag=LSA_RS06375;product=LCP family protein;protein_id=WP_014082486.1;transl_table=11
NC_015978.1	RefSeq	gene	1215496	1217592	.	+	.	ID=gene-LSA_RS06380;Name=LSA_RS06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06380;old_locus_tag=LSA_12680
NC_015978.1	Protein Homology	CDS	1215496	1217592	.	+	0	ID=cds-WP_225361787.1;Parent=gene-LSA_RS06380;Dbxref=Genbank:WP_225361787.1;Name=WP_225361787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017261306.1;locus_tag=LSA_RS06380;product=AAA family ATPase;protein_id=WP_225361787.1;transl_table=11
NC_015978.1	RefSeq	gene	1217677	1217859	.	+	.	ID=gene-LSA_RS06385;Name=LSA_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06385;old_locus_tag=LSA_12690
NC_015978.1	GeneMarkS-2+	CDS	1217677	1217859	.	+	0	ID=cds-WP_014082488.1;Parent=gene-LSA_RS06385;Dbxref=Genbank:WP_014082488.1;Name=WP_014082488.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS06385;product=hypothetical protein;protein_id=WP_014082488.1;transl_table=11
NC_015978.1	RefSeq	gene	1217902	1218672	.	-	.	ID=gene-LSA_RS06390;Name=LSA_RS06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06390;old_locus_tag=LSA_12700
NC_015978.1	Protein Homology	CDS	1217902	1218672	.	-	0	ID=cds-WP_014082489.1;Parent=gene-LSA_RS06390;Dbxref=Genbank:WP_014082489.1;Name=WP_014082489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013721100.1;locus_tag=LSA_RS06390;product=tyrosine protein phosphatase;protein_id=WP_014082489.1;transl_table=11
NC_015978.1	RefSeq	gene	1218669	1219406	.	-	.	ID=gene-LSA_RS06395;Name=LSA_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06395;old_locus_tag=LSA_12710
NC_015978.1	Protein Homology	CDS	1218669	1219406	.	-	0	ID=cds-WP_041817972.1;Parent=gene-LSA_RS06395;Dbxref=Genbank:WP_041817972.1;Name=WP_041817972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014215687.1;locus_tag=LSA_RS06395;product=CpsD/CapB family tyrosine-protein kinase;protein_id=WP_041817972.1;transl_table=11
NC_015978.1	RefSeq	gene	1219415	1220164	.	-	.	ID=gene-LSA_RS06400;Name=LSA_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06400;old_locus_tag=LSA_12720
NC_015978.1	Protein Homology	CDS	1219415	1220164	.	-	0	ID=cds-WP_103434653.1;Parent=gene-LSA_RS06400;Dbxref=Genbank:WP_103434653.1;Name=WP_103434653.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005917523.1;locus_tag=LSA_RS06400;product=Wzz/FepE/Etk N-terminal domain-containing protein;protein_id=WP_103434653.1;transl_table=11
NC_015978.1	RefSeq	gene	1220745	1221173	.	-	.	ID=gene-LSA_RS07315;Name=LSA_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07315;old_locus_tag=LSA_12740
NC_015978.1	GeneMarkS-2+	CDS	1220745	1221173	.	-	0	ID=cds-WP_049777627.1;Parent=gene-LSA_RS07315;Dbxref=Genbank:WP_049777627.1;Name=WP_049777627.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS07315;product=hypothetical protein;protein_id=WP_049777627.1;transl_table=11
NC_015978.1	RefSeq	gene	1221435	1222313	.	-	.	ID=gene-LSA_RS06410;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=LSA_RS06410;old_locus_tag=LSA_12760
NC_015978.1	Protein Homology	CDS	1221435	1222313	.	-	0	ID=cds-WP_014081814.1-2;Parent=gene-LSA_RS06410;Dbxref=Genbank:WP_014081814.1;Name=WP_014081814.1;Ontology_term=GO:0009225,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011018342.1;locus_tag=LSA_RS06410;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_014081814.1;transl_table=11
NC_015978.1	RefSeq	gene	1222501	1223433	.	-	.	ID=gene-LSA_RS06415;Name=LSA_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06415;old_locus_tag=LSA_12770
NC_015978.1	Protein Homology	CDS	1222501	1223433	.	-	0	ID=cds-WP_225361786.1;Parent=gene-LSA_RS06415;Dbxref=Genbank:WP_225361786.1;Name=WP_225361786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022336.1;locus_tag=LSA_RS06415;product=alpha/beta fold hydrolase;protein_id=WP_225361786.1;transl_table=11
NC_015978.1	RefSeq	gene	1223494	1223925	.	-	.	ID=gene-LSA_RS06420;Name=LSA_RS06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06420;old_locus_tag=LSA_12780
NC_015978.1	GeneMarkS-2+	CDS	1223494	1223925	.	-	0	ID=cds-WP_014082493.1;Parent=gene-LSA_RS06420;Dbxref=Genbank:WP_014082493.1;Name=WP_014082493.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS06420;product=hypothetical protein;protein_id=WP_014082493.1;transl_table=11
NC_015978.1	RefSeq	gene	1224075	1224836	.	-	.	ID=gene-LSA_RS06425;Name=LSA_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06425
NC_015978.1	Protein Homology	CDS	1224075	1224836	.	-	0	ID=cds-WP_041817974.1;Parent=gene-LSA_RS06425;Dbxref=Genbank:WP_041817974.1;Name=WP_041817974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010745351.1;locus_tag=LSA_RS06425;product=LysM domain-containing protein;protein_id=WP_041817974.1;transl_table=11
NC_015978.1	RefSeq	gene	1225315	1226490	.	-	.	ID=gene-LSA_RS06430;Name=LSA_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06430;old_locus_tag=LSA_12800
NC_015978.1	Protein Homology	CDS	1225315	1226490	.	-	0	ID=cds-WP_014082494.1;Parent=gene-LSA_RS06430;Dbxref=Genbank:WP_014082494.1;Name=WP_014082494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003664510.1;locus_tag=LSA_RS06430;product=RNA-guided endonuclease TnpB family protein;protein_id=WP_014082494.1;transl_table=11
NC_015978.1	RefSeq	gene	1226490	1226888	.	-	.	ID=gene-LSA_RS06435;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LSA_RS06435;old_locus_tag=LSA_12810
NC_015978.1	Protein Homology	CDS	1226490	1226888	.	-	0	ID=cds-WP_014081459.1-8;Parent=gene-LSA_RS06435;Dbxref=Genbank:WP_014081459.1;Name=WP_014081459.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000762755.1;locus_tag=LSA_RS06435;product=IS200/IS605 family transposase;protein_id=WP_014081459.1;transl_table=11
NC_015978.1	RefSeq	gene	1227011	1227319	.	+	.	ID=gene-LSA_RS06440;Name=LSA_RS06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06440;old_locus_tag=LSA_12820
NC_015978.1	Protein Homology	CDS	1227011	1227319	.	+	0	ID=cds-WP_014082495.1;Parent=gene-LSA_RS06440;Dbxref=Genbank:WP_014082495.1;Name=WP_014082495.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015553.2;locus_tag=LSA_RS06440;product=cadmium resistance transporter;protein_id=WP_014082495.1;transl_table=11
NC_015978.1	RefSeq	gene	1227366	1227533	.	-	.	ID=gene-LSA_RS07790;Name=LSA_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07790;old_locus_tag=LSA_12830
NC_015978.1	GeneMarkS-2+	CDS	1227366	1227533	.	-	0	ID=cds-WP_014082496.1;Parent=gene-LSA_RS07790;Dbxref=Genbank:WP_014082496.1;Name=WP_014082496.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS07790;product=hypothetical protein;protein_id=WP_014082496.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	1227652	1228664	.	+	.	ID=gene-LSA_RS06450;Name=LSA_RS06450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS06450;old_locus_tag=LSA_12850;pseudo=true
NC_015978.1	Protein Homology	CDS	1227652	1228664	.	+	0	ID=cds-LSA_RS06450;Parent=gene-LSA_RS06450;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558186.1;locus_tag=LSA_RS06450;product=IS3 family transposase;pseudo=true;transl_table=11
NC_015978.1	RefSeq	pseudogene	1228723	1229064	.	-	.	ID=gene-LSA_RS07665;Name=LSA_RS07665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS07665;pseudo=true
NC_015978.1	Protein Homology	CDS	1228723	1229064	.	-	0	ID=cds-LSA_RS07665;Parent=gene-LSA_RS07665;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019253709.1;locus_tag=LSA_RS07665;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11
NC_015978.1	RefSeq	gene	1229171	1230142	.	-	.	ID=gene-LSA_RS06460;Name=LSA_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06460;old_locus_tag=LSA_12870
NC_015978.1	Protein Homology	CDS	1229171	1230142	.	-	0	ID=cds-WP_014082499.1;Parent=gene-LSA_RS06460;Dbxref=Genbank:WP_014082499.1;Name=WP_014082499.1;Ontology_term=GO:0006163,GO:0003920,GO:1902560;gbkey=CDS;go_component=GMP reductase complex|1902560||IEA;go_function=GMP reductase activity|0003920||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022189.1;locus_tag=LSA_RS06460;product=GMP reductase;protein_id=WP_014082499.1;transl_table=11
NC_015978.1	RefSeq	gene	1230337	1230747	.	+	.	ID=gene-LSA_RS06465;Name=LSA_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06465;old_locus_tag=LSA_12880
NC_015978.1	GeneMarkS-2+	CDS	1230337	1230747	.	+	0	ID=cds-WP_014082500.1;Parent=gene-LSA_RS06465;Dbxref=Genbank:WP_014082500.1;Name=WP_014082500.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS06465;product=hypothetical protein;protein_id=WP_014082500.1;transl_table=11
NC_015978.1	RefSeq	gene	1230770	1232086	.	-	.	ID=gene-LSA_RS06470;Name=LSA_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06470;old_locus_tag=LSA_12890
NC_015978.1	Protein Homology	CDS	1230770	1232086	.	-	0	ID=cds-WP_014082501.1;Parent=gene-LSA_RS06470;Dbxref=Genbank:WP_014082501.1;Name=WP_014082501.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010763029.1;locus_tag=LSA_RS06470;product=amino acid permease;protein_id=WP_014082501.1;transl_table=11
NC_015978.1	RefSeq	gene	1232476	1233621	.	+	.	ID=gene-LSA_RS06475;Name=LSA_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06475;old_locus_tag=LSA_12900
NC_015978.1	Protein Homology	CDS	1232476	1233621	.	+	0	ID=cds-WP_041817975.1;Parent=gene-LSA_RS06475;Dbxref=Genbank:WP_041817975.1;Name=WP_041817975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007125282.1;locus_tag=LSA_RS06475;product=glycerate kinase;protein_id=WP_041817975.1;transl_table=11
NC_015978.1	RefSeq	gene	1233631	1234194	.	-	.	ID=gene-LSA_RS06480;Name=LSA_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06480;old_locus_tag=LSA_12910
NC_015978.1	Protein Homology	CDS	1233631	1234194	.	-	0	ID=cds-WP_014082503.1;Parent=gene-LSA_RS06480;Dbxref=Genbank:WP_014082503.1;Name=WP_014082503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011673847.1;locus_tag=LSA_RS06480;product=TIGR00730 family Rossman fold protein;protein_id=WP_014082503.1;transl_table=11
NC_015978.1	RefSeq	gene	1234257	1234625	.	-	.	ID=gene-LSA_RS06485;Name=LSA_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06485;old_locus_tag=LSA_12920
NC_015978.1	Protein Homology	CDS	1234257	1234625	.	-	0	ID=cds-WP_014082504.1;Parent=gene-LSA_RS06485;Dbxref=Genbank:WP_014082504.1;Name=WP_014082504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010006877.1;locus_tag=LSA_RS06485;product=PaaI family thioesterase;protein_id=WP_014082504.1;transl_table=11
NC_015978.1	RefSeq	gene	1234708	1235529	.	+	.	ID=gene-LSA_RS06490;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=LSA_RS06490;old_locus_tag=LSA_12930
NC_015978.1	Protein Homology	CDS	1234708	1235529	.	+	0	ID=cds-WP_014082505.1;Parent=gene-LSA_RS06490;Dbxref=Genbank:WP_014082505.1;Name=WP_014082505.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010053538.1;locus_tag=LSA_RS06490;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_014082505.1;transl_table=11
NC_015978.1	RefSeq	gene	1235544	1236971	.	+	.	ID=gene-LSA_RS06495;Name=LSA_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06495;old_locus_tag=LSA_12940
NC_015978.1	Protein Homology	CDS	1235544	1236971	.	+	0	ID=cds-WP_041817976.1;Parent=gene-LSA_RS06495;Dbxref=Genbank:WP_041817976.1;Name=WP_041817976.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010053539.1;locus_tag=LSA_RS06495;product=o-succinylbenzoate--CoA ligase;protein_id=WP_041817976.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	1237083	1238452	.	+	.	ID=gene-LSA_RS06500;Name=LSA_RS06500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS06500;old_locus_tag=LSA_12950;pseudo=true
NC_015978.1	Protein Homology	CDS	1237083	1238452	.	+	0	ID=cds-LSA_RS06500;Parent=gene-LSA_RS06500;Note=frameshifted;Ontology_term=GO:0008643,GO:0051119,GO:0005887;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA;go_function=sugar transmembrane transporter activity|0051119||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010623001.1;locus_tag=LSA_RS06500;product=sugar porter family MFS transporter;pseudo=true;transl_table=11
NC_015978.1	RefSeq	gene	1238497	1239357	.	-	.	ID=gene-LSA_RS06505;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=LSA_RS06505;old_locus_tag=LSA_12960
NC_015978.1	Protein Homology	CDS	1238497	1239357	.	-	0	ID=cds-WP_049777629.1;Parent=gene-LSA_RS06505;Dbxref=Genbank:WP_049777629.1;Name=WP_049777629.1;Ontology_term=GO:0019361,GO:0046917;gbkey=CDS;gene=citG;go_function=triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthetic process|0019361||IEA;inference=COORDINATES: protein motif:HMM:TIGR03125.1;locus_tag=LSA_RS06505;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_049777629.1;transl_table=11
NC_015978.1	RefSeq	gene	1239350	1239874	.	-	.	ID=gene-LSA_RS06510;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=LSA_RS06510;old_locus_tag=LSA_12970
NC_015978.1	Protein Homology	CDS	1239350	1239874	.	-	0	ID=cds-WP_041817977.1;Parent=gene-LSA_RS06510;Dbxref=Genbank:WP_041817977.1;Name=WP_041817977.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004044966.1;locus_tag=LSA_RS06510;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_041817977.1;transl_table=11
NC_015978.1	RefSeq	gene	1239935	1241473	.	-	.	ID=gene-LSA_RS06515;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=LSA_RS06515;old_locus_tag=LSA_12980
NC_015978.1	Protein Homology	CDS	1239935	1241473	.	-	0	ID=cds-WP_041817978.1;Parent=gene-LSA_RS06515;Dbxref=Genbank:WP_041817978.1;Name=WP_041817978.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015380016.1;locus_tag=LSA_RS06515;product=citrate lyase subunit alpha;protein_id=WP_041817978.1;transl_table=11
NC_015978.1	RefSeq	gene	1241463	1242377	.	-	.	ID=gene-LSA_RS06520;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=LSA_RS06520;old_locus_tag=LSA_12990
NC_015978.1	Protein Homology	CDS	1241463	1242377	.	-	0	ID=cds-WP_014082510.1;Parent=gene-LSA_RS06520;Dbxref=Genbank:WP_014082510.1;Name=WP_014082510.1;Ontology_term=GO:0006113,GO:0008815,GO:0009346;gbkey=CDS;gene=citE;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166413.1;locus_tag=LSA_RS06520;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_014082510.1;transl_table=11
NC_015978.1	RefSeq	gene	1242379	1242672	.	-	.	ID=gene-LSA_RS06525;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=LSA_RS06525;old_locus_tag=LSA_13000
NC_015978.1	Protein Homology	CDS	1242379	1242672	.	-	0	ID=cds-WP_014082511.1;Parent=gene-LSA_RS06525;Dbxref=Genbank:WP_014082511.1;Name=WP_014082511.1;Ontology_term=GO:0006113,GO:0008815,GO:0009346;gbkey=CDS;gene=citD;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002817844.1;locus_tag=LSA_RS06525;product=citrate lyase acyl carrier protein;protein_id=WP_014082511.1;transl_table=11
NC_015978.1	RefSeq	gene	1242662	1243720	.	-	.	ID=gene-LSA_RS06530;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=LSA_RS06530;old_locus_tag=LSA_13010
NC_015978.1	Protein Homology	CDS	1242662	1243720	.	-	0	ID=cds-WP_041817980.1;Parent=gene-LSA_RS06530;Dbxref=Genbank:WP_041817980.1;Name=WP_041817980.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006500681.1;locus_tag=LSA_RS06530;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_041817980.1;transl_table=11
NC_015978.1	RefSeq	gene	1243750	1244892	.	-	.	ID=gene-LSA_RS06535;Name=LSA_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06535;old_locus_tag=LSA_13020
NC_015978.1	Protein Homology	CDS	1243750	1244892	.	-	0	ID=cds-WP_014082513.1;Parent=gene-LSA_RS06535;Dbxref=Genbank:WP_014082513.1;Name=WP_014082513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010619232.1;locus_tag=LSA_RS06535;product=NADP-dependent malic enzyme;protein_id=WP_014082513.1;transl_table=11
NC_015978.1	RefSeq	gene	1244955	1246238	.	-	.	ID=gene-LSA_RS06540;Name=LSA_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06540;old_locus_tag=LSA_13030
NC_015978.1	Protein Homology	CDS	1244955	1246238	.	-	0	ID=cds-WP_041817981.1;Parent=gene-LSA_RS06540;Dbxref=Genbank:WP_041817981.1;Name=WP_041817981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009167114.1;locus_tag=LSA_RS06540;product=2-hydroxycarboxylate transporter family protein;protein_id=WP_041817981.1;transl_table=11
NC_015978.1	RefSeq	pseudogene	1246438	1247358	.	+	.	ID=gene-LSA_RS06545;Name=LSA_RS06545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS06545;old_locus_tag=LSA_13040;partial=true;pseudo=true;start_range=.,1246438
NC_015978.1	Protein Homology	CDS	1246438	1247358	.	+	0	ID=cds-LSA_RS06545;Parent=gene-LSA_RS06545;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006096,GO:0004459,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=L-lactate dehydrogenase activity|0004459||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022833.1;locus_tag=LSA_RS06545;partial=true;product=L-lactate dehydrogenase;pseudo=true;start_range=.,1246438;transl_table=11
NC_015978.1	RefSeq	gene	1247407	1248156	.	-	.	ID=gene-LSA_RS06550;Name=LSA_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06550;old_locus_tag=LSA_13050
NC_015978.1	Protein Homology	CDS	1247407	1248156	.	-	0	ID=cds-WP_014082516.1;Parent=gene-LSA_RS06550;Dbxref=Genbank:WP_014082516.1;Name=WP_014082516.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF013408.2;locus_tag=LSA_RS06550;product=class I mannose-6-phosphate isomerase;protein_id=WP_014082516.1;transl_table=11
NC_015978.1	RefSeq	gene	1248163	1248375	.	-	.	ID=gene-LSA_RS07320;Name=LSA_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07320;old_locus_tag=LSA_13060
NC_015978.1	GeneMarkS-2+	CDS	1248163	1248375	.	-	0	ID=cds-WP_049777631.1;Parent=gene-LSA_RS07320;Dbxref=Genbank:WP_049777631.1;Name=WP_049777631.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS07320;product=hypothetical protein;protein_id=WP_049777631.1;transl_table=11
NC_015978.1	RefSeq	gene	1248450	1249241	.	-	.	ID=gene-LSA_RS06555;Name=LSA_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06555;old_locus_tag=LSA_13070
NC_015978.1	Protein Homology	CDS	1248450	1249241	.	-	0	ID=cds-WP_014082518.1;Parent=gene-LSA_RS06555;Dbxref=Genbank:WP_014082518.1;Name=WP_014082518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166409.1;locus_tag=LSA_RS06555;product=alpha/beta hydrolase;protein_id=WP_014082518.1;transl_table=11
NC_015978.1	RefSeq	gene	1249246	1249593	.	-	.	ID=gene-LSA_RS06560;Name=LSA_RS06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06560;old_locus_tag=LSA_13080
NC_015978.1	GeneMarkS-2+	CDS	1249246	1249593	.	-	0	ID=cds-WP_014082519.1;Parent=gene-LSA_RS06560;Dbxref=Genbank:WP_014082519.1;Name=WP_014082519.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS06560;product=hypothetical protein;protein_id=WP_014082519.1;transl_table=11
NC_015978.1	RefSeq	gene	1249615	1250115	.	-	.	ID=gene-LSA_RS06565;Name=LSA_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06565;old_locus_tag=LSA_13090
NC_015978.1	Protein Homology	CDS	1249615	1250115	.	-	0	ID=cds-WP_041817982.1;Parent=gene-LSA_RS06565;Dbxref=Genbank:WP_041817982.1;Name=WP_041817982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003608539.1;locus_tag=LSA_RS06565;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_041817982.1;transl_table=11
NC_015978.1	RefSeq	gene	1250242	1251177	.	+	.	ID=gene-LSA_RS06570;Name=LSA_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06570;old_locus_tag=LSA_13100
NC_015978.1	Protein Homology	CDS	1250242	1251177	.	+	0	ID=cds-WP_081462428.1;Parent=gene-LSA_RS06570;Dbxref=Genbank:WP_081462428.1;Name=WP_081462428.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003608540.1;locus_tag=LSA_RS06570;product=ATP-binding cassette domain-containing protein;protein_id=WP_081462428.1;transl_table=11
NC_015978.1	RefSeq	gene	1251196	1251717	.	+	.	ID=gene-LSA_RS06575;Name=LSA_RS06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06575;old_locus_tag=LSA_13110
NC_015978.1	Protein Homology	CDS	1251196	1251717	.	+	0	ID=cds-WP_049777632.1;Parent=gene-LSA_RS06575;Dbxref=Genbank:WP_049777632.1;Name=WP_049777632.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013245.2;locus_tag=LSA_RS06575;product=ABC transporter permease;protein_id=WP_049777632.1;transl_table=11
NC_015978.1	RefSeq	gene	1251652	1252710	.	-	.	ID=gene-LSA_RS06580;Name=LSA_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06580;old_locus_tag=LSA_13120
NC_015978.1	Protein Homology	CDS	1251652	1252710	.	-	0	ID=cds-WP_049777633.1;Parent=gene-LSA_RS06580;Dbxref=Genbank:WP_049777633.1;Name=WP_049777633.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF014081.2;locus_tag=LSA_RS06580;product=amidohydrolase family protein;protein_id=WP_049777633.1;transl_table=11
NC_015978.1	RefSeq	gene	1252773	1254110	.	-	.	ID=gene-LSA_RS06585;Name=LSA_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06585;old_locus_tag=LSA_13130
NC_015978.1	Protein Homology	CDS	1252773	1254110	.	-	0	ID=cds-WP_014082521.1;Parent=gene-LSA_RS06585;Dbxref=Genbank:WP_014082521.1;Name=WP_014082521.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008213983.1;locus_tag=LSA_RS06585;product=purine/pyrimidine permease;protein_id=WP_014082521.1;transl_table=11
NC_015978.1	RefSeq	gene	1254303	1254842	.	+	.	ID=gene-LSA_RS06590;Name=LSA_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06590;old_locus_tag=LSA_13140
NC_015978.1	Protein Homology	CDS	1254303	1254842	.	+	0	ID=cds-WP_014082522.1;Parent=gene-LSA_RS06590;Dbxref=Genbank:WP_014082522.1;Name=WP_014082522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014081655.1;locus_tag=LSA_RS06590;product=helix-turn-helix domain-containing protein;protein_id=WP_014082522.1;transl_table=11
NC_015978.1	RefSeq	gene	1254908	1255336	.	+	.	ID=gene-LSA_RS06595;Name=LSA_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06595;old_locus_tag=LSA_13150
NC_015978.1	Protein Homology	CDS	1254908	1255336	.	+	0	ID=cds-WP_049777635.1;Parent=gene-LSA_RS06595;Dbxref=Genbank:WP_049777635.1;Name=WP_049777635.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024673.2;locus_tag=LSA_RS06595;product=IS3 family transposase;protein_id=WP_049777635.1;transl_table=11
NC_015978.1	RefSeq	gene	1255662	1256309	.	-	.	ID=gene-LSA_RS06600;Name=LSA_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06600;old_locus_tag=LSA_13160
NC_015978.1	Protein Homology	CDS	1255662	1256309	.	-	0	ID=cds-WP_014082523.1;Parent=gene-LSA_RS06600;Dbxref=Genbank:WP_014082523.1;Name=WP_014082523.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020088651.1;locus_tag=LSA_RS06600;product=hemolysin III family protein;protein_id=WP_014082523.1;transl_table=11
NC_015978.1	RefSeq	gene	1256536	1256979	.	+	.	ID=gene-LSA_RS06605;Name=LSA_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06605;old_locus_tag=LSA_13170
NC_015978.1	Protein Homology	CDS	1256536	1256979	.	+	0	ID=cds-WP_014082524.1;Parent=gene-LSA_RS06605;Dbxref=Genbank:WP_014082524.1;Name=WP_014082524.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016296.2;locus_tag=LSA_RS06605;product=LytTR family transcriptional regulator;protein_id=WP_014082524.1;transl_table=11
NC_015978.1	RefSeq	gene	1256976	1257437	.	+	.	ID=gene-LSA_RS06610;Name=LSA_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06610;old_locus_tag=LSA_13180
NC_015978.1	Protein Homology	CDS	1256976	1257437	.	+	0	ID=cds-WP_041817983.1;Parent=gene-LSA_RS06610;Dbxref=Genbank:WP_041817983.1;Name=WP_041817983.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022896.2;locus_tag=LSA_RS06610;product=DUF3021 domain-containing protein;protein_id=WP_041817983.1;transl_table=11
NC_015978.1	RefSeq	gene	1257550	1258485	.	+	.	ID=gene-LSA_RS06615;Name=LSA_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06615;old_locus_tag=LSA_13190
NC_015978.1	Protein Homology	CDS	1257550	1258485	.	+	0	ID=cds-WP_014082526.1;Parent=gene-LSA_RS06615;Dbxref=Genbank:WP_014082526.1;Name=WP_014082526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020088444.1;locus_tag=LSA_RS06615;product=phosphate/phosphite/phosphonate ABC transporter substrate-binding protein;protein_id=WP_014082526.1;transl_table=11
NC_015978.1	RefSeq	gene	1258564	1258785	.	-	.	ID=gene-LSA_RS06620;Name=LSA_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06620;old_locus_tag=LSA_13200
NC_015978.1	GeneMarkS-2+	CDS	1258564	1258785	.	-	0	ID=cds-WP_014082527.1;Parent=gene-LSA_RS06620;Dbxref=Genbank:WP_014082527.1;Name=WP_014082527.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS06620;product=hypothetical protein;protein_id=WP_014082527.1;transl_table=11
NC_015978.1	RefSeq	gene	1258816	1259364	.	-	.	ID=gene-LSA_RS06625;Name=LSA_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06625;old_locus_tag=LSA_13210
NC_015978.1	GeneMarkS-2+	CDS	1258816	1259364	.	-	0	ID=cds-WP_041817984.1;Parent=gene-LSA_RS06625;Dbxref=Genbank:WP_041817984.1;Name=WP_041817984.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS06625;product=hypothetical protein;protein_id=WP_041817984.1;transl_table=11
NC_015978.1	RefSeq	gene	1259361	1259897	.	-	.	ID=gene-LSA_RS07325;Name=LSA_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07325;old_locus_tag=LSA_13220
NC_015978.1	Protein Homology	CDS	1259361	1259897	.	-	0	ID=cds-WP_049777636.1;Parent=gene-LSA_RS07325;Dbxref=Genbank:WP_049777636.1;Name=WP_049777636.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001838278.1;locus_tag=LSA_RS07325;product=ATP-binding cassette domain-containing protein;protein_id=WP_049777636.1;transl_table=11
NC_015978.1	RefSeq	gene	1259899	1260279	.	-	.	ID=gene-LSA_RS06635;Name=LSA_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06635;old_locus_tag=LSA_13230
NC_015978.1	Protein Homology	CDS	1259899	1260279	.	-	0	ID=cds-WP_041817986.1;Parent=gene-LSA_RS06635;Dbxref=Genbank:WP_041817986.1;Name=WP_041817986.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=LSA_RS06635;product=ATP-binding cassette domain-containing protein;protein_id=WP_041817986.1;transl_table=11
NC_015978.1	RefSeq	gene	1260452	1261462	.	-	.	ID=gene-LSA_RS06640;Name=LSA_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06640;old_locus_tag=LSA_13240
NC_015978.1	Protein Homology	CDS	1260452	1261462	.	-	0	ID=cds-WP_041817987.1;Parent=gene-LSA_RS06640;Dbxref=Genbank:WP_041817987.1;Name=WP_041817987.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003642118.1;locus_tag=LSA_RS06640;product=putative sulfate exporter family transporter;protein_id=WP_041817987.1;transl_table=11
NC_015978.1	RefSeq	gene	1261574	1262419	.	+	.	ID=gene-LSA_RS06645;Name=LSA_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06645;old_locus_tag=LSA_13250
NC_015978.1	Protein Homology	CDS	1261574	1262419	.	+	0	ID=cds-WP_014082529.1;Parent=gene-LSA_RS06645;Dbxref=Genbank:WP_014082529.1;Name=WP_014082529.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.2;locus_tag=LSA_RS06645;product=LysR family transcriptional regulator;protein_id=WP_014082529.1;transl_table=11
NC_015978.1	RefSeq	gene	1262475	1266203	.	-	.	ID=gene-LSA_RS06650;Name=addA;gbkey=Gene;gene=addA;gene_biotype=protein_coding;locus_tag=LSA_RS06650;old_locus_tag=LSA_13260
NC_015978.1	Protein Homology	CDS	1262475	1266203	.	-	0	ID=cds-WP_014082530.1;Parent=gene-LSA_RS06650;Dbxref=Genbank:WP_014082530.1;Name=WP_014082530.1;Ontology_term=GO:0000724,GO:0003678,GO:0016818;gbkey=CDS;gene=addA;go_function=DNA helicase activity|0003678||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=double-strand break repair via homologous recombination|0000724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166429.1;locus_tag=LSA_RS06650;product=helicase-exonuclease AddAB subunit AddA;protein_id=WP_014082530.1;transl_table=11
NC_015978.1	RefSeq	gene	1266196	1269753	.	-	.	ID=gene-LSA_RS06655;Name=LSA_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06655;old_locus_tag=LSA_13270
NC_015978.1	Protein Homology	CDS	1266196	1269753	.	-	0	ID=cds-WP_014082531.1;Parent=gene-LSA_RS06655;Dbxref=Genbank:WP_014082531.1;Name=WP_014082531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022080.1;locus_tag=LSA_RS06655;product=PD-(D/E)XK nuclease family protein;protein_id=WP_014082531.1;transl_table=11
NC_015978.1	RefSeq	gene	1269763	1270320	.	-	.	ID=gene-LSA_RS06660;Name=LSA_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06660;old_locus_tag=LSA_13280
NC_015978.1	Protein Homology	CDS	1269763	1270320	.	-	0	ID=cds-WP_049777637.1;Parent=gene-LSA_RS06660;Dbxref=Genbank:WP_049777637.1;Name=WP_049777637.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024852.2;locus_tag=LSA_RS06660;product=NAD(P)H-binding protein;protein_id=WP_049777637.1;transl_table=11
NC_015978.1	RefSeq	gene	1270495	1271793	.	+	.	ID=gene-LSA_RS06665;Name=LSA_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06665;old_locus_tag=LSA_13290
NC_015978.1	Protein Homology	CDS	1270495	1271793	.	+	0	ID=cds-WP_180993640.1;Parent=gene-LSA_RS06665;Dbxref=Genbank:WP_180993640.1;Name=WP_180993640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013728958.1;locus_tag=LSA_RS06665;product=NCS2 family permease;protein_id=WP_180993640.1;transl_table=11
NC_015978.1	RefSeq	gene	1271876	1272730	.	-	.	ID=gene-LSA_RS06670;Name=LSA_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06670;old_locus_tag=LSA_13300
NC_015978.1	Protein Homology	CDS	1271876	1272730	.	-	0	ID=cds-WP_041817666.1-4;Parent=gene-LSA_RS06670;Dbxref=Genbank:WP_041817666.1;Name=WP_041817666.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033516.0;locus_tag=LSA_RS06670;product=IS3 family transposase;protein_id=WP_041817666.1;transl_table=11
NC_015978.1	RefSeq	gene	1272730	1273233	.	-	.	ID=gene-LSA_RS06675;Name=LSA_RS06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06675;old_locus_tag=LSA_13310
NC_015978.1	Protein Homology	CDS	1272730	1273233	.	-	0	ID=cds-WP_041817664.1-5;Parent=gene-LSA_RS06675;Dbxref=Genbank:WP_041817664.1;Name=WP_041817664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014082299.1;locus_tag=LSA_RS06675;product=helix-turn-helix domain-containing protein;protein_id=WP_041817664.1;transl_table=11
NC_015978.1	RefSeq	gene	1273415	1273612	.	-	.	ID=gene-LSA_RS06680;Name=LSA_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06680;old_locus_tag=LSA_13320
NC_015978.1	GeneMarkS-2+	CDS	1273415	1273612	.	-	0	ID=cds-WP_014082534.1;Parent=gene-LSA_RS06680;Dbxref=Genbank:WP_014082534.1;Name=WP_014082534.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS06680;product=squalene/phytoene synthase family protein;protein_id=WP_014082534.1;transl_table=11
NC_015978.1	RefSeq	gene	1273815	1274171	.	-	.	ID=gene-LSA_RS06685;Name=LSA_RS06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06685;old_locus_tag=LSA_13340
NC_015978.1	Protein Homology	CDS	1273815	1274171	.	-	0	ID=cds-WP_041817990.1;Parent=gene-LSA_RS06685;Dbxref=Genbank:WP_041817990.1;Name=WP_041817990.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012705.2;locus_tag=LSA_RS06685;product=squalene/phytoene synthase family protein;protein_id=WP_041817990.1;transl_table=11
NC_015978.1	RefSeq	gene	1274164	1275360	.	-	.	ID=gene-LSA_RS06690;Name=crtI;gbkey=Gene;gene=crtI;gene_biotype=protein_coding;locus_tag=LSA_RS06690;old_locus_tag=LSA_13350
NC_015978.1	Protein Homology	CDS	1274164	1275360	.	-	0	ID=cds-WP_225361801.1;Parent=gene-LSA_RS06690;Dbxref=Genbank:WP_225361801.1;Name=WP_225361801.1;Ontology_term=GO:0016117,GO:0016166;gbkey=CDS;gene=crtI;go_function=phytoene dehydrogenase activity|0016166||IEA;go_process=carotenoid biosynthetic process|0016117||IEA;inference=COORDINATES: protein motif:HMM:TIGR02734.1;locus_tag=LSA_RS06690;product=phytoene desaturase family protein;protein_id=WP_225361801.1;transl_table=11
NC_015978.1	RefSeq	gene	1275370	1275654	.	-	.	ID=gene-LSA_RS07950;Name=LSA_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07950;old_locus_tag=LSA_13360
NC_015978.1	Protein Homology	CDS	1275370	1275654	.	-	0	ID=cds-WP_225361800.1;Parent=gene-LSA_RS07950;Dbxref=Genbank:WP_225361800.1;Name=WP_225361800.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF024842.2;locus_tag=LSA_RS07950;product=FAD-dependent oxidoreductase;protein_id=WP_225361800.1;transl_table=11
NC_015978.1	RefSeq	gene	1275795	1275911	.	-	.	ID=gene-LSA_RS06695;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LSA_RS06695;old_locus_tag=LSA_R00800
NC_015978.1	cmsearch	rRNA	1275795	1275911	.	-	.	ID=rna-LSA_RS06695;Parent=gene-LSA_RS06695;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS06695;product=5S ribosomal RNA
NC_015978.1	cmsearch	exon	1275795	1275911	.	-	.	ID=exon-LSA_RS06695-1;Parent=rna-LSA_RS06695;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS06695;product=5S ribosomal RNA
NC_015978.1	RefSeq	gene	1275995	1278910	.	-	.	ID=gene-LSA_RS06700;Name=LSA_RS06700;gbkey=Gene;gene_biotype=rRNA;locus_tag=LSA_RS06700;old_locus_tag=LSA_R00810
NC_015978.1	cmsearch	rRNA	1275995	1278910	.	-	.	ID=rna-LSA_RS06700;Parent=gene-LSA_RS06700;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS06700;product=23S ribosomal RNA
NC_015978.1	cmsearch	exon	1275995	1278910	.	-	.	ID=exon-LSA_RS06700-1;Parent=rna-LSA_RS06700;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS06700;product=23S ribosomal RNA
NC_015978.1	RefSeq	gene	1279132	1280708	.	-	.	ID=gene-LSA_RS06705;Name=LSA_RS06705;gbkey=Gene;gene_biotype=rRNA;locus_tag=LSA_RS06705;old_locus_tag=LSA_R00820
NC_015978.1	cmsearch	rRNA	1279132	1280708	.	-	.	ID=rna-LSA_RS06705;Parent=gene-LSA_RS06705;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS06705;product=16S ribosomal RNA
NC_015978.1	cmsearch	exon	1279132	1280708	.	-	.	ID=exon-LSA_RS06705-1;Parent=rna-LSA_RS06705;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LSA_RS06705;product=16S ribosomal RNA
NC_015978.1	RefSeq	gene	1281132	1281887	.	+	.	ID=gene-LSA_RS06710;Name=LSA_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06710;old_locus_tag=LSA_13370
NC_015978.1	GeneMarkS-2+	CDS	1281132	1281887	.	+	0	ID=cds-WP_014082535.1;Parent=gene-LSA_RS06710;Dbxref=Genbank:WP_014082535.1;Name=WP_014082535.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS06710;product=hypothetical protein;protein_id=WP_014082535.1;transl_table=11
NC_015978.1	RefSeq	gene	1282086	1282742	.	-	.	ID=gene-LSA_RS06715;Name=LSA_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06715;old_locus_tag=LSA_13380
NC_015978.1	Protein Homology	CDS	1282086	1282742	.	-	0	ID=cds-WP_014082536.1;Parent=gene-LSA_RS06715;Dbxref=Genbank:WP_014082536.1;Name=WP_014082536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010000767.1;locus_tag=LSA_RS06715;product=amino acid ABC transporter permease;protein_id=WP_014082536.1;transl_table=11
NC_015978.1	RefSeq	gene	1282754	1283389	.	-	.	ID=gene-LSA_RS06720;Name=LSA_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06720;old_locus_tag=LSA_13390
NC_015978.1	Protein Homology	CDS	1282754	1283389	.	-	0	ID=cds-WP_041817992.1;Parent=gene-LSA_RS06720;Dbxref=Genbank:WP_041817992.1;Name=WP_041817992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010000768.1;locus_tag=LSA_RS06720;product=amino acid ABC transporter permease;protein_id=WP_041817992.1;transl_table=11
NC_015978.1	RefSeq	gene	1283386	1284249	.	-	.	ID=gene-LSA_RS06725;Name=LSA_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06725;old_locus_tag=LSA_13400
NC_015978.1	Protein Homology	CDS	1283386	1284249	.	-	0	ID=cds-WP_041817993.1;Parent=gene-LSA_RS06725;Dbxref=Genbank:WP_041817993.1;Name=WP_041817993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011677792.1;locus_tag=LSA_RS06725;product=transporter substrate-binding domain-containing protein;protein_id=WP_041817993.1;transl_table=11
NC_015978.1	RefSeq	gene	1284267	1284998	.	-	.	ID=gene-LSA_RS06730;Name=LSA_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06730;old_locus_tag=LSA_13410
NC_015978.1	Protein Homology	CDS	1284267	1284998	.	-	0	ID=cds-WP_180993649.1;Parent=gene-LSA_RS06730;Dbxref=Genbank:WP_180993649.1;Name=WP_180993649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857431.1;locus_tag=LSA_RS06730;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_180993649.1;transl_table=11
NC_015978.1	RefSeq	gene	1285223	1286692	.	-	.	ID=gene-LSA_RS06735;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=LSA_RS06735;old_locus_tag=LSA_13420
NC_015978.1	Protein Homology	CDS	1285223	1286692	.	-	0	ID=cds-WP_041817995.1;Parent=gene-LSA_RS06735;Dbxref=Genbank:WP_041817995.1;Name=WP_041817995.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022086.1;locus_tag=LSA_RS06735;product=cardiolipin synthase;protein_id=WP_041817995.1;transl_table=11
NC_015978.1	RefSeq	gene	1286813	1288135	.	-	.	ID=gene-LSA_RS06740;Name=LSA_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06740;old_locus_tag=LSA_13430
NC_015978.1	Protein Homology	CDS	1286813	1288135	.	-	0	ID=cds-WP_014082541.1;Parent=gene-LSA_RS06740;Dbxref=Genbank:WP_014082541.1;Name=WP_014082541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022090.1;locus_tag=LSA_RS06740;product=C1 family peptidase;protein_id=WP_014082541.1;transl_table=11
NC_015978.1	RefSeq	gene	1288218	1288853	.	-	.	ID=gene-LSA_RS06745;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=LSA_RS06745;old_locus_tag=LSA_13440
NC_015978.1	Protein Homology	CDS	1288218	1288853	.	-	0	ID=cds-WP_014082542.1;Parent=gene-LSA_RS06745;Dbxref=Genbank:WP_014082542.1;Name=WP_014082542.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166418.1;locus_tag=LSA_RS06745;product=signal peptidase I;protein_id=WP_014082542.1;transl_table=11
NC_015978.1	RefSeq	gene	1288892	1289782	.	-	.	ID=gene-LSA_RS06750;Name=LSA_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06750;old_locus_tag=LSA_13450
NC_015978.1	Protein Homology	CDS	1288892	1289782	.	-	0	ID=cds-WP_041817996.1;Parent=gene-LSA_RS06750;Dbxref=Genbank:WP_041817996.1;Name=WP_041817996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166417.1;locus_tag=LSA_RS06750;product=alpha/beta hydrolase;protein_id=WP_041817996.1;transl_table=11
NC_015978.1	RefSeq	gene	1289845	1290738	.	-	.	ID=gene-LSA_RS06755;Name=LSA_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06755;old_locus_tag=LSA_13460
NC_015978.1	Protein Homology	CDS	1289845	1290738	.	-	0	ID=cds-WP_014082544.1;Parent=gene-LSA_RS06755;Dbxref=Genbank:WP_014082544.1;Name=WP_014082544.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013088.2;locus_tag=LSA_RS06755;product=DMT family transporter;protein_id=WP_014082544.1;transl_table=11
NC_015978.1	RefSeq	gene	1290836	1291708	.	+	.	ID=gene-LSA_RS06760;Name=LSA_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06760;old_locus_tag=LSA_13470
NC_015978.1	Protein Homology	CDS	1290836	1291708	.	+	0	ID=cds-WP_041817997.1;Parent=gene-LSA_RS06760;Dbxref=Genbank:WP_041817997.1;Name=WP_041817997.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.2;locus_tag=LSA_RS06760;product=LysR family transcriptional regulator;protein_id=WP_041817997.1;transl_table=11
NC_015978.1	RefSeq	gene	1291751	1292083	.	-	.	ID=gene-LSA_RS06765;Name=LSA_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06765;old_locus_tag=LSA_13480
NC_015978.1	Protein Homology	CDS	1291751	1292083	.	-	0	ID=cds-WP_014082546.1;Parent=gene-LSA_RS06765;Dbxref=Genbank:WP_014082546.1;Name=WP_014082546.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF014505.2;locus_tag=LSA_RS06765;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_014082546.1;transl_table=11
NC_015978.1	RefSeq	gene	1292076	1292315	.	-	.	ID=gene-LSA_RS06770;Name=LSA_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06770;old_locus_tag=LSA_13490
NC_015978.1	GeneMarkS-2+	CDS	1292076	1292315	.	-	0	ID=cds-WP_014082547.1;Parent=gene-LSA_RS06770;Dbxref=Genbank:WP_014082547.1;Name=WP_014082547.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS06770;product=hypothetical protein;protein_id=WP_014082547.1;transl_table=11
NC_015978.1	RefSeq	gene	1292397	1294337	.	-	.	ID=gene-LSA_RS06775;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=LSA_RS06775;old_locus_tag=LSA_13500
NC_015978.1	Protein Homology	CDS	1292397	1294337	.	-	0	ID=cds-WP_041817998.1;Parent=gene-LSA_RS06775;Dbxref=Genbank:WP_041817998.1;Name=WP_041817998.1;Ontology_term=GO:0002098,GO:0008033,GO:0050660;gbkey=CDS;gene=mnmG;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010022174.1;locus_tag=LSA_RS06775;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_041817998.1;transl_table=11
NC_015978.1	RefSeq	gene	1294368	1295765	.	-	.	ID=gene-LSA_RS06780;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=LSA_RS06780;old_locus_tag=LSA_13510
NC_015978.1	Protein Homology	CDS	1294368	1295765	.	-	0	ID=cds-WP_014082549.1;Parent=gene-LSA_RS06780;Dbxref=Genbank:WP_014082549.1;Name=WP_014082549.1;Ontology_term=GO:0006400,GO:0003924,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014940848.1;locus_tag=LSA_RS06780;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_014082549.1;transl_table=11
NC_015978.1	RefSeq	gene	1295916	1296638	.	-	.	ID=gene-LSA_RS06785;Name=LSA_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06785;old_locus_tag=LSA_13520
NC_015978.1	Protein Homology	CDS	1295916	1296638	.	-	0	ID=cds-WP_014082550.1;Parent=gene-LSA_RS06785;Dbxref=Genbank:WP_014082550.1;Name=WP_014082550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009166406.1;locus_tag=LSA_RS06785;product=protein jag;protein_id=WP_014082550.1;transl_table=11
NC_015978.1	RefSeq	gene	1296783	1297619	.	-	.	ID=gene-LSA_RS06790;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=LSA_RS06790;old_locus_tag=LSA_13530
NC_015978.1	Protein Homology	CDS	1296783	1297619	.	-	0	ID=cds-WP_014082551.1;Parent=gene-LSA_RS06790;Dbxref=Genbank:WP_014082551.1;Name=WP_014082551.1;Ontology_term=GO:0051205,GO:0003674,GO:0031224;gbkey=CDS;gene=yidC;go_component=intrinsic component of membrane|0031224||IEA;go_function=molecular_function|0003674||IEA;go_process=protein insertion into membrane|0051205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015826200.1;locus_tag=LSA_RS06790;product=membrane protein insertase YidC;protein_id=WP_014082551.1;transl_table=11
NC_015978.1	RefSeq	gene	1297616	1297978	.	-	.	ID=gene-LSA_RS06795;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=LSA_RS06795;old_locus_tag=LSA_13540
NC_015978.1	Protein Homology	CDS	1297616	1297978	.	-	0	ID=cds-WP_014082552.1;Parent=gene-LSA_RS06795;Dbxref=Genbank:WP_014082552.1;Name=WP_014082552.1;Ontology_term=GO:0006396,GO:0004526;gbkey=CDS;gene=rnpA;go_function=ribonuclease P activity|0004526||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010619017.1;locus_tag=LSA_RS06795;product=ribonuclease P protein component;protein_id=WP_014082552.1;transl_table=11
NC_015978.1	RefSeq	gene	1298040	1298174	.	-	.	ID=gene-LSA_RS06800;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=LSA_RS06800;old_locus_tag=LSA_13550
NC_015978.1	Protein Homology	CDS	1298040	1298174	.	-	0	ID=cds-WP_014082553.1;Parent=gene-LSA_RS06800;Dbxref=Genbank:WP_014082553.1;Name=WP_014082553.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003397591.1;locus_tag=LSA_RS06800;product=50S ribosomal protein L34;protein_id=WP_014082553.1;transl_table=11
##sequence-region NC_015979.1 1 58739
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=714313
NC_015979.1	RefSeq	region	1	58739	.	+	.	ID=NC_015979.1:1..58739;Dbxref=taxon:714313;Is_circular=true;Name=pLS1;gbkey=Src;genome=plasmid;mol_type=genomic DNA;old-name=Lactobacillus sanfranciscensis TMW 1.1304;plasmid-name=pLS1;strain=TMW 1.1304
NC_015979.1	RefSeq	gene	250	1791	.	+	.	ID=gene-LSA_RS06810;Name=LSA_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06810;old_locus_tag=LSA_2p00010
NC_015979.1	Protein Homology	CDS	250	1791	.	+	0	ID=cds-WP_014082554.1;Parent=gene-LSA_RS06810;Dbxref=Genbank:WP_014082554.1;Name=WP_014082554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010625591.1;locus_tag=LSA_RS06810;product=primase C-terminal domain-containing protein;protein_id=WP_014082554.1;transl_table=11
NC_015979.1	RefSeq	pseudogene	1918	2211	.	+	.	ID=gene-LSA_RS07495;Name=LSA_RS07495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS07495;partial=true;pseudo=true;start_range=.,1918
NC_015979.1	Protein Homology	CDS	1918	2211	.	+	0	ID=cds-LSA_RS07495;Parent=gene-LSA_RS07495;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016526802.1;locus_tag=LSA_RS07495;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1918;transl_table=11
NC_015979.1	RefSeq	gene	2361	2558	.	+	.	ID=gene-LSA_RS06815;Name=LSA_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06815;old_locus_tag=LSA_2p00030
NC_015979.1	Protein Homology	CDS	2361	2558	.	+	0	ID=cds-WP_014082555.1;Parent=gene-LSA_RS06815;Dbxref=Genbank:WP_014082555.1;Name=WP_014082555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003691009.1;locus_tag=LSA_RS06815;product=hypothetical protein;protein_id=WP_014082555.1;transl_table=11
NC_015979.1	RefSeq	gene	2560	2832	.	+	.	ID=gene-LSA_RS07955;Name=LSA_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07955;old_locus_tag=LSA_2p00040
NC_015979.1	GeneMarkS-2+	CDS	2560	2832	.	+	0	ID=cds-WP_014082556.1;Parent=gene-LSA_RS07955;Dbxref=Genbank:WP_014082556.1;Name=WP_014082556.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS07955;product=hypothetical protein;protein_id=WP_014082556.1;transl_table=11
NC_015979.1	RefSeq	pseudogene	3043	3219	.	+	.	ID=gene-LSA_RS07500;Name=LSA_RS07500;end_range=3219,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS07500;old_locus_tag=LSA_2p00050;partial=true;pseudo=true
NC_015979.1	Protein Homology	CDS	3043	3219	.	+	0	ID=cds-LSA_RS07500;Parent=gene-LSA_RS07500;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3219,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005693059.1;locus_tag=LSA_RS07500;partial=true;product=MobA/MobL family protein;pseudo=true;transl_table=11
NC_015979.1	RefSeq	gene	3497	3979	.	-	.	ID=gene-LSA_RS06825;Name=LSA_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06825;old_locus_tag=LSA_2p00060
NC_015979.1	GeneMarkS-2+	CDS	3497	3979	.	-	0	ID=cds-WP_041818210.1;Parent=gene-LSA_RS06825;Dbxref=Genbank:WP_041818210.1;Name=WP_041818210.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS06825;product=hypothetical protein;protein_id=WP_041818210.1;transl_table=11
NC_015979.1	RefSeq	gene	4036	4323	.	-	.	ID=gene-LSA_RS06830;Name=LSA_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06830;old_locus_tag=LSA_2p00070
NC_015979.1	GeneMarkS-2+	CDS	4036	4323	.	-	0	ID=cds-WP_014082557.1;Parent=gene-LSA_RS06830;Dbxref=Genbank:WP_014082557.1;Name=WP_014082557.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS06830;product=hypothetical protein;protein_id=WP_014082557.1;transl_table=11
NC_015979.1	RefSeq	gene	4333	4590	.	-	.	ID=gene-LSA_RS06835;Name=LSA_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06835;old_locus_tag=LSA_2p00080
NC_015979.1	GeneMarkS-2+	CDS	4333	4590	.	-	0	ID=cds-WP_014082558.1;Parent=gene-LSA_RS06835;Dbxref=Genbank:WP_014082558.1;Name=WP_014082558.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS06835;product=hypothetical protein;protein_id=WP_014082558.1;transl_table=11
NC_015979.1	RefSeq	gene	4752	4877	.	-	.	ID=gene-LSA_RS07960;Name=LSA_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07960;old_locus_tag=LSA_2p00090
NC_015979.1	GeneMarkS-2+	CDS	4752	4877	.	-	0	ID=cds-WP_258027366.1;Parent=gene-LSA_RS07960;Dbxref=Genbank:WP_258027366.1;Name=WP_258027366.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS07960;product=hypothetical protein;protein_id=WP_258027366.1;transl_table=11
NC_015979.1	RefSeq	gene	5013	5252	.	-	.	ID=gene-LSA_RS07505;Name=LSA_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07505;old_locus_tag=LSA_2p00100
NC_015979.1	Protein Homology	CDS	5013	5252	.	-	0	ID=cds-WP_225361777.1;Parent=gene-LSA_RS07505;Dbxref=Genbank:WP_225361777.1;Name=WP_225361777.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024729.2;locus_tag=LSA_RS07505;product=IS3 family transposase;protein_id=WP_225361777.1;transl_table=11
NC_015979.1	RefSeq	gene	5713	6168	.	-	.	ID=gene-LSA_RS06840;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LSA_RS06840;old_locus_tag=LSA_2p00110
NC_015979.1	Protein Homology	CDS	5713	6168	.	-	0	ID=cds-WP_014082560.1;Parent=gene-LSA_RS06840;Dbxref=Genbank:WP_014082560.1;Name=WP_014082560.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003684311.1;locus_tag=LSA_RS06840;product=IS200/IS605 family transposase;protein_id=WP_014082560.1;transl_table=11
NC_015979.1	RefSeq	gene	6242	7489	.	+	.	ID=gene-LSA_RS06845;Name=LSA_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06845;old_locus_tag=LSA_2p00120
NC_015979.1	Protein Homology	CDS	6242	7489	.	+	0	ID=cds-WP_014082561.1;Parent=gene-LSA_RS06845;Dbxref=Genbank:WP_014082561.1;Name=WP_014082561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012391038.1;locus_tag=LSA_RS06845;product=RNA-guided endonuclease TnpB family protein;protein_id=WP_014082561.1;transl_table=11
NC_015979.1	RefSeq	gene	7672	8370	.	+	.	ID=gene-LSA_RS06850;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=LSA_RS06850;old_locus_tag=LSA_2p00130
NC_015979.1	Protein Homology	CDS	7672	8370	.	+	0	ID=cds-WP_163615054.1;Parent=gene-LSA_RS06850;Dbxref=Genbank:WP_163615054.1;Name=WP_163615054.1;Ontology_term=GO:0015890,GO:0015663,GO:0016021;gbkey=CDS;gene=pnuC;go_component=integral component of membrane|0016021||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: protein motif:HMM:TIGR01528.1;locus_tag=LSA_RS06850;product=nicotinamide riboside transporter PnuC;protein_id=WP_163615054.1;transl_table=11
NC_015979.1	RefSeq	gene	9495	9896	.	+	.	ID=gene-LSA_RS06860;Name=LSA_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06860;old_locus_tag=LSA_2p00170
NC_015979.1	Protein Homology	CDS	9495	9896	.	+	0	ID=cds-WP_041818214.1;Parent=gene-LSA_RS06860;Dbxref=Genbank:WP_041818214.1;Name=WP_041818214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013726950.1;locus_tag=LSA_RS06860;product=CrcB family protein;protein_id=WP_041818214.1;transl_table=11
NC_015979.1	RefSeq	gene	9893	10249	.	+	.	ID=gene-LSA_RS06865;Name=LSA_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06865;old_locus_tag=LSA_2p00180
NC_015979.1	Protein Homology	CDS	9893	10249	.	+	0	ID=cds-WP_014082567.1;Parent=gene-LSA_RS06865;Dbxref=Genbank:WP_014082567.1;Name=WP_014082567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014939156.1;locus_tag=LSA_RS06865;product=CrcB family protein;protein_id=WP_014082567.1;transl_table=11
NC_015979.1	RefSeq	gene	10323	10754	.	+	.	ID=gene-LSA_RS07510;Name=LSA_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07510;old_locus_tag=LSA_2p00190
NC_015979.1	Protein Homology	CDS	10323	10754	.	+	0	ID=cds-WP_081462440.1;Parent=gene-LSA_RS07510;Dbxref=Genbank:WP_081462440.1;Name=WP_081462440.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033516.0;locus_tag=LSA_RS07510;product=IS3 family transposase;protein_id=WP_081462440.1;transl_table=11
NC_015979.1	RefSeq	gene	11080	11664	.	+	.	ID=gene-LSA_RS06875;Name=LSA_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06875;old_locus_tag=LSA_2p00200
NC_015979.1	Protein Homology	CDS	11080	11664	.	+	0	ID=cds-WP_041818216.1;Parent=gene-LSA_RS06875;Dbxref=Genbank:WP_041818216.1;Name=WP_041818216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014567995.1;locus_tag=LSA_RS06875;product=recombinase family protein;protein_id=WP_041818216.1;transl_table=11
NC_015979.1	RefSeq	gene	12005	12553	.	-	.	ID=gene-LSA_RS06885;Name=LSA_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06885;old_locus_tag=LSA_2p00220
NC_015979.1	Protein Homology	CDS	12005	12553	.	-	0	ID=cds-WP_014082570.1;Parent=gene-LSA_RS06885;Dbxref=Genbank:WP_014082570.1;Name=WP_014082570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006917122.1;locus_tag=LSA_RS06885;product=cysteine hydrolase;protein_id=WP_014082570.1;transl_table=11
NC_015979.1	RefSeq	gene	12555	13994	.	-	.	ID=gene-LSA_RS06890;Name=LSA_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06890;old_locus_tag=LSA_2p00230
NC_015979.1	Protein Homology	CDS	12555	13994	.	-	0	ID=cds-WP_014082571.1;Parent=gene-LSA_RS06890;Dbxref=Genbank:WP_014082571.1;Name=WP_014082571.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003715885.1;locus_tag=LSA_RS06890;product=nicotinate phosphoribosyltransferase;protein_id=WP_014082571.1;transl_table=11
NC_015979.1	RefSeq	gene	14110	14814	.	-	.	ID=gene-LSA_RS06895;Name=LSA_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06895;old_locus_tag=LSA_2p00240
NC_015979.1	Protein Homology	CDS	14110	14814	.	-	0	ID=cds-WP_014082572.1;Parent=gene-LSA_RS06895;Dbxref=Genbank:WP_014082572.1;Name=WP_014082572.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014567977.1;locus_tag=LSA_RS06895;product=NUDIX domain-containing protein;protein_id=WP_014082572.1;transl_table=11
NC_015979.1	RefSeq	gene	15224	16153	.	-	.	ID=gene-LSA_RS06900;Name=LSA_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06900;old_locus_tag=LSA_2p00250
NC_015979.1	Protein Homology	CDS	15224	16153	.	-	0	ID=cds-WP_014082573.1;Parent=gene-LSA_RS06900;Dbxref=Genbank:WP_014082573.1;Name=WP_014082573.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_053338758.1;locus_tag=LSA_RS06900;product=IS30 family transposase;protein_id=WP_014082573.1;transl_table=11
NC_015979.1	RefSeq	gene	16257	16673	.	+	.	ID=gene-LSA_RS06905;Name=LSA_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06905;old_locus_tag=LSA_2p00260
NC_015979.1	Protein Homology	CDS	16257	16673	.	+	0	ID=cds-WP_041818220.1;Parent=gene-LSA_RS06905;Dbxref=Genbank:WP_041818220.1;Name=WP_041818220.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010014214.1;locus_tag=LSA_RS06905;product=MFS transporter;protein_id=WP_041818220.1;transl_table=11
NC_015979.1	RefSeq	gene	16826	18160	.	+	.	ID=gene-LSA_RS06910;Name=LSA_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06910;old_locus_tag=LSA_2p00270
NC_015979.1	Protein Homology	CDS	16826	18160	.	+	0	ID=cds-WP_014082574.1;Parent=gene-LSA_RS06910;Dbxref=Genbank:WP_014082574.1;Name=WP_014082574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017260795.1;locus_tag=LSA_RS06910;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_014082574.1;transl_table=11
NC_015979.1	RefSeq	gene	18231	18605	.	-	.	ID=gene-LSA_RS06915;Name=LSA_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06915;old_locus_tag=LSA_2p00280
NC_015979.1	Protein Homology	CDS	18231	18605	.	-	0	ID=cds-WP_049777660.1;Parent=gene-LSA_RS06915;Dbxref=Genbank:WP_049777660.1;Name=WP_049777660.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF025063.2;locus_tag=LSA_RS06915;product=IS3 family transposase;protein_id=WP_049777660.1;transl_table=11
NC_015979.1	RefSeq	gene	18746	21508	.	+	.	ID=gene-LSA_RS06920;Name=LSA_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06920;old_locus_tag=LSA_2p00290
NC_015979.1	Protein Homology	CDS	18746	21508	.	+	0	ID=cds-WP_014082575.1;Parent=gene-LSA_RS06920;Dbxref=Genbank:WP_014082575.1;Name=WP_014082575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015639209.1;locus_tag=LSA_RS06920;product=CRISPR-associated helicase/endonuclease Cas3;protein_id=WP_014082575.1;transl_table=11
NC_015979.1	RefSeq	gene	21498	23219	.	+	.	ID=gene-LSA_RS06925;Name=LSA_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06925;old_locus_tag=LSA_2p00300
NC_015979.1	Protein Homology	CDS	21498	23219	.	+	0	ID=cds-WP_014082576.1;Parent=gene-LSA_RS06925;Dbxref=Genbank:WP_014082576.1;Name=WP_014082576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010495829.1;locus_tag=LSA_RS06925;product=type I-E CRISPR-associated protein Cse1/CasA;protein_id=WP_014082576.1;transl_table=11
NC_015979.1	RefSeq	gene	23229	23792	.	+	.	ID=gene-LSA_RS06930;Name=LSA_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06930;old_locus_tag=LSA_2p00310
NC_015979.1	Protein Homology	CDS	23229	23792	.	+	0	ID=cds-WP_225361779.1;Parent=gene-LSA_RS06930;Dbxref=Genbank:WP_225361779.1;Name=WP_225361779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014082577.1;locus_tag=LSA_RS06930;product=type I-E CRISPR-associated protein Cse2/CasB;protein_id=WP_225361779.1;transl_table=11
NC_015979.1	RefSeq	gene	23833	24912	.	+	.	ID=gene-LSA_RS06935;Name=cas7e;gbkey=Gene;gene=cas7e;gene_biotype=protein_coding;locus_tag=LSA_RS06935;old_locus_tag=LSA_2p00320
NC_015979.1	Protein Homology	CDS	23833	24912	.	+	0	ID=cds-WP_014082578.1;Parent=gene-LSA_RS06935;Dbxref=Genbank:WP_014082578.1;Name=WP_014082578.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=cas7e;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010495833.1;locus_tag=LSA_RS06935;product=type I-E CRISPR-associated protein Cas7/Cse4/CasC;protein_id=WP_014082578.1;transl_table=11
NC_015979.1	RefSeq	gene	24980	25723	.	+	.	ID=gene-LSA_RS06940;Name=cas5e;gbkey=Gene;gene=cas5e;gene_biotype=protein_coding;locus_tag=LSA_RS06940;old_locus_tag=LSA_2p00330
NC_015979.1	Protein Homology	CDS	24980	25723	.	+	0	ID=cds-WP_014082579.1;Parent=gene-LSA_RS06940;Dbxref=Genbank:WP_014082579.1;Name=WP_014082579.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=cas5e;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003611339.1;locus_tag=LSA_RS06940;product=type I-E CRISPR-associated protein Cas5/CasD;protein_id=WP_014082579.1;transl_table=11
NC_015979.1	RefSeq	gene	25737	26489	.	+	.	ID=gene-LSA_RS06945;Name=cas6e;gbkey=Gene;gene=cas6e;gene_biotype=protein_coding;locus_tag=LSA_RS06945;old_locus_tag=LSA_2p00340
NC_015979.1	Protein Homology	CDS	25737	26489	.	+	0	ID=cds-WP_014082580.1;Parent=gene-LSA_RS06945;Dbxref=Genbank:WP_014082580.1;Name=WP_014082580.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=cas6e;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003638535.1;locus_tag=LSA_RS06945;product=type I-E CRISPR-associated protein Cas6/Cse3/CasE;protein_id=WP_014082580.1;transl_table=11
NC_015979.1	RefSeq	gene	26654	27874	.	+	.	ID=gene-LSA_RS06950;Name=LSA_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06950;old_locus_tag=LSA_2p00350
NC_015979.1	Protein Homology	CDS	26654	27874	.	+	0	ID=cds-WP_014082581.1;Parent=gene-LSA_RS06950;Dbxref=Genbank:WP_014082581.1;Name=WP_014082581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003710818.1;locus_tag=LSA_RS06950;product=RNA-guided endonuclease TnpB family protein;protein_id=WP_014082581.1;transl_table=11
NC_015979.1	RefSeq	direct_repeat	28011	28901	.	+	.	ID=id-NC_015979.1:28011..28901;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=28073..28100;rpt_unit_seq=gtattccccacgcatgtgggggtgatcc
NC_015979.1	RefSeq	gene	28977	29228	.	+	.	ID=gene-LSA_RS06955;Name=LSA_RS06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06955;old_locus_tag=LSA_2p00370
NC_015979.1	Protein Homology	CDS	28977	29228	.	+	0	ID=cds-WP_002816285.1;Parent=gene-LSA_RS06955;Dbxref=Genbank:WP_002816285.1;Name=WP_002816285.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013677.2;locus_tag=LSA_RS06955;product=IS3 family transposase;protein_id=WP_002816285.1;transl_table=11
NC_015979.1	RefSeq	gene	29246	30118	.	+	.	ID=gene-LSA_RS06960;Name=LSA_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06960;old_locus_tag=LSA_2p00380
NC_015979.1	Protein Homology	CDS	29246	30118	.	+	0	ID=cds-WP_258027367.1;Parent=gene-LSA_RS06960;Dbxref=Genbank:WP_258027367.1;Name=WP_258027367.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033516.0;locus_tag=LSA_RS06960;product=IS3 family transposase;protein_id=WP_258027367.1;transl_table=11
NC_015979.1	RefSeq	gene	30580	31524	.	+	.	ID=gene-LSA_RS06965;Name=LSA_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06965;old_locus_tag=LSA_2p00390
NC_015979.1	Protein Homology	CDS	30580	31524	.	+	0	ID=cds-WP_014082584.1;Parent=gene-LSA_RS06965;Dbxref=Genbank:WP_014082584.1;Name=WP_014082584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015825630.1;locus_tag=LSA_RS06965;product=NADP-dependent oxidoreductase;protein_id=WP_014082584.1;transl_table=11
NC_015979.1	RefSeq	gene	32623	33552	.	+	.	ID=gene-LSA_RS06970;Name=LSA_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06970;old_locus_tag=LSA_2p00400
NC_015979.1	Protein Homology	CDS	32623	33552	.	+	0	ID=cds-WP_041818227.1;Parent=gene-LSA_RS06970;Dbxref=Genbank:WP_041818227.1;Name=WP_041818227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016526818.1;locus_tag=LSA_RS06970;product=replication initiation protein;protein_id=WP_041818227.1;transl_table=11
NC_015979.1	RefSeq	pseudogene	33545	33665	.	+	.	ID=gene-LSA_RS07965;Name=LSA_RS07965;end_range=33665,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS07965;partial=true;pseudo=true
NC_015979.1	Protein Homology	CDS	33545	33665	.	+	0	ID=cds-LSA_RS07965;Parent=gene-LSA_RS07965;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=33665,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002302544.1;locus_tag=LSA_RS07965;partial=true;product=DUF536 domain-containing protein;pseudo=true;transl_table=11
NC_015979.1	RefSeq	gene	33825	34400	.	+	.	ID=gene-LSA_RS06975;Name=LSA_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06975;old_locus_tag=LSA_2p00410
NC_015979.1	Protein Homology	CDS	33825	34400	.	+	0	ID=cds-WP_258027365.1;Parent=gene-LSA_RS06975;Dbxref=Genbank:WP_258027365.1;Name=WP_258027365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010620856.1;locus_tag=LSA_RS06975;product=DUF536 domain-containing protein;protein_id=WP_258027365.1;transl_table=11
NC_015979.1	RefSeq	gene	34622	36475	.	+	.	ID=gene-LSA_RS06980;Name=LSA_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06980;old_locus_tag=LSA_2p00420
NC_015979.1	Protein Homology	CDS	34622	36475	.	+	0	ID=cds-WP_014082587.1;Parent=gene-LSA_RS06980;Dbxref=Genbank:WP_014082587.1;Name=WP_014082587.1;Ontology_term=GO:0032775,GO:0009007;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016294109.1;locus_tag=LSA_RS06980;product=DNA adenine methylase;protein_id=WP_014082587.1;transl_table=11
NC_015979.1	RefSeq	gene	36490	37635	.	+	.	ID=gene-LSA_RS06985;Name=LSA_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06985;old_locus_tag=LSA_2p00430
NC_015979.1	Protein Homology	CDS	36490	37635	.	+	0	ID=cds-WP_041818231.1;Parent=gene-LSA_RS06985;Dbxref=Genbank:WP_041818231.1;Name=WP_041818231.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024783.2;locus_tag=LSA_RS06985;product=HNH endonuclease;protein_id=WP_041818231.1;transl_table=11
NC_015979.1	RefSeq	gene	38324	39238	.	-	.	ID=gene-LSA_RS06990;Name=LSA_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06990;old_locus_tag=LSA_2p00440
NC_015979.1	Protein Homology	CDS	38324	39238	.	-	0	ID=cds-WP_011668694.1;Parent=gene-LSA_RS06990;Dbxref=Genbank:WP_011668694.1;Name=WP_011668694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015474306.1;locus_tag=LSA_RS06990;product=hypothetical protein;protein_id=WP_011668694.1;transl_table=11
NC_015979.1	RefSeq	pseudogene	39462	39674	.	+	.	ID=gene-LSA_RS07520;Name=LSA_RS07520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS07520;old_locus_tag=LSA_2p00450;partial=true;pseudo=true;start_range=.,39462
NC_015979.1	Protein Homology	CDS	39462	39674	.	+	0	ID=cds-LSA_RS07520;Parent=gene-LSA_RS07520;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016526818.1;locus_tag=LSA_RS07520;partial=true;product=replication initiation protein;pseudo=true;start_range=.,39462;transl_table=11
NC_015979.1	RefSeq	gene	39928	41685	.	-	.	ID=gene-LSA_RS06995;Name=LSA_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS06995;old_locus_tag=LSA_2p00460
NC_015979.1	Protein Homology	CDS	39928	41685	.	-	0	ID=cds-WP_014082589.1;Parent=gene-LSA_RS06995;Dbxref=Genbank:WP_014082589.1;Name=WP_014082589.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021375.2;locus_tag=LSA_RS06995;product=DUF2075 domain-containing protein;protein_id=WP_014082589.1;transl_table=11
NC_015979.1	RefSeq	gene	42112	43461	.	-	.	ID=gene-LSA_RS07000;Name=LSA_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07000;old_locus_tag=LSA_2p00470
NC_015979.1	Protein Homology	CDS	42112	43461	.	-	0	ID=cds-WP_041818235.1;Parent=gene-LSA_RS07000;Dbxref=Genbank:WP_041818235.1;Name=WP_041818235.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010370162.1;locus_tag=LSA_RS07000;product=cytosine permease;protein_id=WP_041818235.1;transl_table=11
NC_015979.1	RefSeq	gene	43659	44891	.	+	.	ID=gene-LSA_RS07005;Name=codA;gbkey=Gene;gene=codA;gene_biotype=protein_coding;locus_tag=LSA_RS07005;old_locus_tag=LSA_2p00480
NC_015979.1	Protein Homology	CDS	43659	44891	.	+	0	ID=cds-WP_041818237.1;Parent=gene-LSA_RS07005;Dbxref=Genbank:WP_041818237.1;Name=WP_041818237.1;Ontology_term=GO:0016810;gbkey=CDS;gene=codA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010018374.1;locus_tag=LSA_RS07005;product=cytosine deaminase;protein_id=WP_041818237.1;transl_table=11
NC_015979.1	RefSeq	pseudogene	44962	45405	.	+	.	ID=gene-LSA_RS07530;Name=LSA_RS07530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS07530;old_locus_tag=LSA_2p00490;partial=true;pseudo=true;start_range=.,44962
NC_015979.1	Protein Homology	CDS	44962	45405	.	+	0	ID=cds-LSA_RS07530;Parent=gene-LSA_RS07530;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010018375.1;locus_tag=LSA_RS07530;partial=true;product=hypothetical protein;pseudo=true;start_range=.,44962;transl_table=11
NC_015979.1	RefSeq	gene	45606	45941	.	+	.	ID=gene-LSA_RS07015;Name=LSA_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07015;old_locus_tag=LSA_2p00500
NC_015979.1	Protein Homology	CDS	45606	45941	.	+	0	ID=cds-WP_041818238.1;Parent=gene-LSA_RS07015;Dbxref=Genbank:WP_041818238.1;Name=WP_041818238.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040237.1;locus_tag=LSA_RS07015;product=KxYKxGKxW signal peptide domain-containing protein;protein_id=WP_041818238.1;transl_table=11
NC_015979.1	RefSeq	gene	46239	49364	.	+	.	ID=gene-LSA_RS07020;Name=LSA_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07020;old_locus_tag=LSA_2p00510
NC_015979.1	Protein Homology	CDS	46239	49364	.	+	0	ID=cds-WP_103434638.1;Parent=gene-LSA_RS07020;Dbxref=Genbank:WP_103434638.1;Name=WP_103434638.1;Ontology_term=GO:0009986;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016396951.1;locus_tag=LSA_RS07020;product=LPXTG cell wall anchor domain-containing protein;protein_id=WP_103434638.1;transl_table=11
NC_015979.1	RefSeq	gene	50013	50165	.	+	.	ID=gene-LSA_RS07795;Name=LSA_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07795;old_locus_tag=LSA_2p00520
NC_015979.1	GeneMarkS-2+	CDS	50013	50165	.	+	0	ID=cds-WP_014082592.1;Parent=gene-LSA_RS07795;Dbxref=Genbank:WP_014082592.1;Name=WP_014082592.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS07795;product=hypothetical protein;protein_id=WP_014082592.1;transl_table=11
NC_015979.1	RefSeq	gene	50314	50631	.	+	.	ID=gene-LSA_RS07340;Name=LSA_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07340;old_locus_tag=LSA_2p00530
NC_015979.1	Protein Homology	CDS	50314	50631	.	+	0	ID=cds-WP_014082593.1;Parent=gene-LSA_RS07340;Dbxref=Genbank:WP_014082593.1;Name=WP_014082593.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012442.2;locus_tag=LSA_RS07340;product=HU family DNA-binding protein;protein_id=WP_014082593.1;transl_table=11
NC_015979.1	RefSeq	pseudogene	50762	51892	.	+	.	ID=gene-LSA_RS07035;Name=LSA_RS07035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS07035;old_locus_tag=LSA_2p00550;pseudo=true
NC_015979.1	Protein Homology	CDS	50762	51892	.	+	0	ID=cds-LSA_RS07035;Parent=gene-LSA_RS07035;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002328814.1;locus_tag=LSA_RS07035;product=IS256 family transposase;pseudo=true;transl_table=11
NC_015979.1	RefSeq	gene	52403	52972	.	-	.	ID=gene-LSA_RS07040;Name=LSA_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07040;old_locus_tag=LSA_2p00560
NC_015979.1	Protein Homology	CDS	52403	52972	.	-	0	ID=cds-WP_014082596.1;Parent=gene-LSA_RS07040;Dbxref=Genbank:WP_014082596.1;Name=WP_014082596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008857281.1;locus_tag=LSA_RS07040;product=TIGR01440 family protein;protein_id=WP_014082596.1;transl_table=11
NC_015979.1	RefSeq	gene	53516	54169	.	-	.	ID=gene-LSA_RS07045;Name=LSA_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07045;old_locus_tag=LSA_2p00570
NC_015979.1	Protein Homology	CDS	53516	54169	.	-	0	ID=cds-WP_041818240.1;Parent=gene-LSA_RS07045;Dbxref=Genbank:WP_041818240.1;Name=WP_041818240.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF025063.2;locus_tag=LSA_RS07045;product=integrase core domain-containing protein;protein_id=WP_041818240.1;transl_table=11
NC_015979.1	RefSeq	gene	54223	54474	.	-	.	ID=gene-LSA_RS07970;Name=LSA_RS07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07970;old_locus_tag=LSA_2p00580
NC_015979.1	Protein Homology	CDS	54223	54474	.	-	0	ID=cds-WP_002816285.1-2;Parent=gene-LSA_RS07970;Dbxref=Genbank:WP_002816285.1;Name=WP_002816285.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013677.2;locus_tag=LSA_RS07970;product=IS3 family transposase;protein_id=WP_002816285.1;transl_table=11
NC_015979.1	RefSeq	gene	54678	55334	.	+	.	ID=gene-LSA_RS07055;Name=LSA_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07055;old_locus_tag=LSA_2p00590
NC_015979.1	Protein Homology	CDS	54678	55334	.	+	0	ID=cds-WP_049777662.1;Parent=gene-LSA_RS07055;Dbxref=Genbank:WP_049777662.1;Name=WP_049777662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010625594.1;locus_tag=LSA_RS07055;product=recombinase family protein;protein_id=WP_049777662.1;transl_table=11
NC_015979.1	RefSeq	gene	55723	56810	.	+	.	ID=gene-LSA_RS07065;Name=LSA_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07065;old_locus_tag=LSA_2p00610
NC_015979.1	Protein Homology	CDS	55723	55993	.	+	0	ID=cds-WP_144011146.1;Parent=gene-LSA_RS07065;Dbxref=Genbank:WP_144011146.1;Name=WP_144011146.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558186.1;locus_tag=LSA_RS07065;product=IS3 family transposase;protein_id=WP_144011146.1;transl_table=11
NC_015979.1	Protein Homology	CDS	55993	56810	.	+	2	ID=cds-WP_144011146.1;Parent=gene-LSA_RS07065;Dbxref=Genbank:WP_144011146.1;Name=WP_144011146.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558186.1;locus_tag=LSA_RS07065;product=IS3 family transposase;protein_id=WP_144011146.1;transl_table=11
NC_015979.1	RefSeq	gene	57055	57435	.	-	.	ID=gene-LSA_RS07070;Name=LSA_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07070;old_locus_tag=LSA_2p00620
NC_015979.1	Protein Homology	CDS	57055	57435	.	-	0	ID=cds-WP_014082601.1;Parent=gene-LSA_RS07070;Dbxref=Genbank:WP_014082601.1;Name=WP_014082601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921843.1;locus_tag=LSA_RS07070;product=hypothetical protein;protein_id=WP_014082601.1;transl_table=11
NC_015979.1	RefSeq	gene	57447	58340	.	-	.	ID=gene-LSA_RS07075;Name=LSA_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07075;old_locus_tag=LSA_2p00630
NC_015979.1	Protein Homology	CDS	57447	58340	.	-	0	ID=cds-WP_014082602.1;Parent=gene-LSA_RS07075;Dbxref=Genbank:WP_014082602.1;Name=WP_014082602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036993.1;locus_tag=LSA_RS07075;product=ParA family protein;protein_id=WP_014082602.1;transl_table=11
##sequence-region NC_015980.1 1 18715
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=714313
NC_015980.1	RefSeq	region	1	18715	.	+	.	ID=NC_015980.1:1..18715;Dbxref=taxon:714313;Is_circular=true;Name=pLS2;gbkey=Src;genome=plasmid;mol_type=genomic DNA;old-name=Lactobacillus sanfranciscensis TMW 1.1304;plasmid-name=pLS2;strain=TMW 1.1304
NC_015980.1	RefSeq	gene	105	932	.	+	.	ID=gene-LSA_RS07080;Name=LSA_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07080;old_locus_tag=LSA_1p00010
NC_015980.1	Protein Homology	CDS	105	932	.	+	0	ID=cds-WP_041818276.1;Parent=gene-LSA_RS07080;Dbxref=Genbank:WP_041818276.1;Name=WP_041818276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010623287.1;locus_tag=LSA_RS07080;product=AAA family ATPase;protein_id=WP_041818276.1;transl_table=11
NC_015980.1	RefSeq	gene	916	1254	.	+	.	ID=gene-LSA_RS07085;Name=LSA_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07085;old_locus_tag=LSA_1p00020
NC_015980.1	Protein Homology	CDS	916	1254	.	+	0	ID=cds-WP_014082604.1;Parent=gene-LSA_RS07085;Dbxref=Genbank:WP_014082604.1;Name=WP_014082604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020090532.1;locus_tag=LSA_RS07085;product=DUF5388 domain-containing protein;protein_id=WP_014082604.1;transl_table=11
NC_015980.1	RefSeq	pseudogene	2131	2304	.	+	.	ID=gene-LSA_RS07535;Name=LSA_RS07535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS07535;partial=true;pseudo=true;start_range=.,2131
NC_015980.1	Protein Homology	CDS	2131	2304	.	+	0	ID=cds-LSA_RS07535;Parent=gene-LSA_RS07535;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002834573.1;locus_tag=LSA_RS07535;partial=true;product=PbsX family transcriptional regulator;pseudo=true;start_range=.,2131;transl_table=11
NC_015980.1	RefSeq	gene	2494	3521	.	-	.	ID=gene-LSA_RS07090;Name=LSA_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07090;old_locus_tag=LSA_1p00030
NC_015980.1	Protein Homology	CDS	3335	3521	.	-	0	ID=cds-WP_238331756.1;Parent=gene-LSA_RS07090;Dbxref=Genbank:WP_238331756.1;Name=WP_238331756.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558186.1;locus_tag=LSA_RS07090;product=IS3 family transposase;protein_id=WP_238331756.1;transl_table=11
NC_015980.1	Protein Homology	CDS	2494	3335	.	-	2	ID=cds-WP_238331756.1;Parent=gene-LSA_RS07090;Dbxref=Genbank:WP_238331756.1;Name=WP_238331756.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558186.1;locus_tag=LSA_RS07090;product=IS3 family transposase;protein_id=WP_238331756.1;transl_table=11
NC_015980.1	RefSeq	gene	3912	4538	.	+	.	ID=gene-LSA_RS07100;Name=LSA_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07100;old_locus_tag=LSA_1p00050
NC_015980.1	GeneMarkS-2+	CDS	3912	4538	.	+	0	ID=cds-WP_041818282.1;Parent=gene-LSA_RS07100;Dbxref=Genbank:WP_041818282.1;Name=WP_041818282.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS07100;product=hypothetical protein;protein_id=WP_041818282.1;transl_table=11
NC_015980.1	RefSeq	gene	4994	6028	.	-	.	ID=gene-LSA_RS07105;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=LSA_RS07105;old_locus_tag=LSA_1p00060
NC_015980.1	Protein Homology	CDS	4994	6028	.	-	0	ID=cds-WP_041818285.1;Parent=gene-LSA_RS07105;Dbxref=Genbank:WP_041818285.1;Name=WP_041818285.1;Ontology_term=GO:0043101,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine-containing compound salvage|0043101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004910782.1;locus_tag=LSA_RS07105;product=adenosine deaminase;protein_id=WP_041818285.1;transl_table=11
NC_015980.1	RefSeq	gene	6229	7563	.	+	.	ID=gene-LSA_RS07110;Name=LSA_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07110;old_locus_tag=LSA_1p00070
NC_015980.1	Protein Homology	CDS	6229	7563	.	+	0	ID=cds-WP_014082608.1;Parent=gene-LSA_RS07110;Dbxref=Genbank:WP_014082608.1;Name=WP_014082608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004910779.1;locus_tag=LSA_RS07110;product=NCS2 family permease;protein_id=WP_014082608.1;transl_table=11
NC_015980.1	RefSeq	gene	7583	9376	.	+	.	ID=gene-LSA_RS07115;Name=LSA_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07115;old_locus_tag=LSA_1p00080
NC_015980.1	Protein Homology	CDS	7583	9376	.	+	0	ID=cds-WP_041818287.1;Parent=gene-LSA_RS07115;Dbxref=Genbank:WP_041818287.1;Name=WP_041818287.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004910777.1;locus_tag=LSA_RS07115;product=amidohydrolase family protein;protein_id=WP_041818287.1;transl_table=11
NC_015980.1	RefSeq	gene	9680	10270	.	-	.	ID=gene-LSA_RS07120;Name=LSA_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07120;old_locus_tag=LSA_1p00090
NC_015980.1	Protein Homology	CDS	9680	10270	.	-	0	ID=cds-WP_014082610.1;Parent=gene-LSA_RS07120;Dbxref=Genbank:WP_014082610.1;Name=WP_014082610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017369153.1;locus_tag=LSA_RS07120;product=site-specific integrase;protein_id=WP_014082610.1;transl_table=11
NC_015980.1	RefSeq	pseudogene	10691	10900	.	+	.	ID=gene-LSA_RS07545;Name=LSA_RS07545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LSA_RS07545;old_locus_tag=LSA_1p00100;partial=true;pseudo=true;start_range=.,10691
NC_015980.1	Protein Homology	CDS	10691	10900	.	+	0	ID=cds-LSA_RS07545;Parent=gene-LSA_RS07545;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002328814.1;locus_tag=LSA_RS07545;partial=true;product=transposase;pseudo=true;start_range=.,10691;transl_table=11
NC_015980.1	RefSeq	gene	11022	11261	.	-	.	ID=gene-LSA_RS07695;Name=LSA_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07695;old_locus_tag=LSA_1p00110
NC_015980.1	Protein Homology	CDS	11022	11261	.	-	0	ID=cds-WP_225361783.1;Parent=gene-LSA_RS07695;Dbxref=Genbank:WP_225361783.1;Name=WP_225361783.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF024729.2;locus_tag=LSA_RS07695;product=IS3 family transposase;protein_id=WP_225361783.1;transl_table=11
NC_015980.1	RefSeq	gene	11328	12038	.	-	.	ID=gene-LSA_RS07125;Name=LSA_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07125;old_locus_tag=LSA_1p00120
NC_015980.1	Protein Homology	CDS	11328	12038	.	-	0	ID=cds-WP_144011147.1;Parent=gene-LSA_RS07125;Dbxref=Genbank:WP_144011147.1;Name=WP_144011147.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033516.0;locus_tag=LSA_RS07125;product=IS3 family transposase;protein_id=WP_144011147.1;transl_table=11
NC_015980.1	RefSeq	gene	12038	12541	.	-	.	ID=gene-LSA_RS07130;Name=LSA_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07130;old_locus_tag=LSA_1p00130
NC_015980.1	Protein Homology	CDS	12038	12541	.	-	0	ID=cds-WP_041818289.1;Parent=gene-LSA_RS07130;Dbxref=Genbank:WP_041818289.1;Name=WP_041818289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014082299.1;locus_tag=LSA_RS07130;product=helix-turn-helix domain-containing protein;protein_id=WP_041818289.1;transl_table=11
NC_015980.1	RefSeq	gene	12585	13901	.	-	.	ID=gene-LSA_RS07135;Name=dcm;gbkey=Gene;gene=dcm;gene_biotype=protein_coding;locus_tag=LSA_RS07135;old_locus_tag=LSA_1p00140
NC_015980.1	Protein Homology	CDS	12585	13901	.	-	0	ID=cds-WP_014082613.1;Parent=gene-LSA_RS07135;Dbxref=Genbank:WP_014082613.1;Name=WP_014082613.1;Ontology_term=GO:0006304,GO:0003886;gbkey=CDS;gene=dcm;go_function=DNA (cytosine-5-)-methyltransferase activity|0003886||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011109868.1;locus_tag=LSA_RS07135;product=DNA (cytosine-5-)-methyltransferase;protein_id=WP_014082613.1;transl_table=11
NC_015980.1	RefSeq	gene	13969	15213	.	-	.	ID=gene-LSA_RS07140;Name=LSA_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07140;old_locus_tag=LSA_1p00150
NC_015980.1	Protein Homology	CDS	13969	15213	.	-	0	ID=cds-WP_163600785.1;Parent=gene-LSA_RS07140;Dbxref=Genbank:WP_163600785.1;Name=WP_163600785.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021622.2;locus_tag=LSA_RS07140;product=hypothetical protein;protein_id=WP_163600785.1;transl_table=11
NC_015980.1	RefSeq	gene	15219	16868	.	-	.	ID=gene-LSA_RS07145;Name=LSA_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07145;old_locus_tag=LSA_1p00160
NC_015980.1	Protein Homology	CDS	15219	16868	.	-	0	ID=cds-WP_041818292.1;Parent=gene-LSA_RS07145;Dbxref=Genbank:WP_041818292.1;Name=WP_041818292.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF019348.2;locus_tag=LSA_RS07145;product=AAA family ATPase;protein_id=WP_041818292.1;transl_table=11
NC_015980.1	RefSeq	gene	16996	17211	.	-	.	ID=gene-LSA_RS07150;Name=LSA_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07150;old_locus_tag=LSA_1p00170
NC_015980.1	GeneMarkS-2+	CDS	16996	17211	.	-	0	ID=cds-WP_103434643.1;Parent=gene-LSA_RS07150;Dbxref=Genbank:WP_103434643.1;Name=WP_103434643.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS07150;product=hypothetical protein;protein_id=WP_103434643.1;transl_table=11
NC_015980.1	RefSeq	gene	17411	17674	.	-	.	ID=gene-LSA_RS07155;Name=LSA_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LSA_RS07155;old_locus_tag=LSA_1p00190
NC_015980.1	GeneMarkS-2+	CDS	17411	17674	.	-	0	ID=cds-WP_014082617.1;Parent=gene-LSA_RS07155;Dbxref=Genbank:WP_014082617.1;Name=WP_014082617.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LSA_RS07155;product=hypothetical protein;protein_id=WP_014082617.1;transl_table=11
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