locus-tag class description DW350_RS00005 PF00308 Bacterial dnaA protein DW350_RS00005 PF11638 DnaA N-terminal domain DW350_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix DW350_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain DW350_RS00010 PF02767 DNA polymerase III beta subunit, central domain DW350_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain DW350_RS00015 PF02463 RecF/RecN/SMC N terminal domain DW350_RS00020 PF18053 DNA gyrase B subunit insert domain DW350_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW350_RS00020 PF01751 Toprim domain DW350_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus DW350_RS00020 PF00204 DNA gyrase B DW350_RS00025 PF08659 KR domain DW350_RS00025 PF02801 Beta-ketoacyl synthase, C-terminal domain DW350_RS00025 PF00550 Phosphopantetheine attachment site DW350_RS00025 PF14765 Polyketide synthase dehydratase DW350_RS00025 PF00109 Beta-ketoacyl synthase, N-terminal domain DW350_RS00025 PF16197 Ketoacyl-synthetase C-terminal extension DW350_RS00025 PF00698 Acyl transferase domain DW350_RS00025 PF08240 Alcohol dehydrogenase GroES-like domain DW350_RS00035 PF00171 Aldehyde dehydrogenase family DW350_RS00040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS00040 PF03466 LysR substrate binding domain DW350_RS00045 PF03466 LysR substrate binding domain DW350_RS00045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS00050 PF02525 Flavodoxin-like fold DW350_RS00055 PF05746 DALR anticodon binding domain DW350_RS00055 PF02092 Glycyl-tRNA synthetase beta subunit DW350_RS00060 PF02091 Glycyl-tRNA synthetase alpha subunit DW350_RS00095 PF01206 Sulfurtransferase TusA DW350_RS00100 PF05818 Enterobacterial TraT complement resistance protein DW350_RS00105 PF00108 Thiolase, N-terminal domain DW350_RS00105 PF02803 Thiolase, C-terminal domain DW350_RS00110 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DW350_RS00110 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DW350_RS00110 PF00378 Enoyl-CoA hydratase/isomerase DW350_RS00115 PF00557 Metallopeptidase family M24 DW350_RS00120 PF09186 Domain of unknown function (DUF1949) DW350_RS00120 PF01205 Uncharacterized protein family UPF0029 DW350_RS00125 PF12724 Flavodoxin domain DW350_RS00130 PF02386 Cation transport protein DW350_RS00135 PF02254 TrkA-N domain DW350_RS00135 PF02080 TrkA-C domain DW350_RS00140 PF01029 NusB family DW350_RS00140 PF01189 16S rRNA methyltransferase RsmB/F DW350_RS00145 PF02911 Formyl transferase, C-terminal domain DW350_RS00145 PF00551 Formyl transferase DW350_RS00150 PF01327 Polypeptide deformylase DW350_RS00160 PF17782 DprA winged helix domain DW350_RS00160 PF02481 DNA recombination-mediator protein A DW350_RS00165 PF04361 Protein of unknown function (DUF494) DW350_RS00175 PF01396 Topoisomerase DNA binding C4 zinc finger DW350_RS00175 PF01131 DNA topoisomerase DW350_RS00175 PF01751 Toprim domain DW350_RS00180 PF01300 Telomere recombination DW350_RS00185 PF01218 Coproporphyrinogen III oxidase DW350_RS00195 PF08501 Shikimate dehydrogenase substrate binding domain DW350_RS00195 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DW350_RS00195 PF01488 Shikimate / quinate 5-dehydrogenase DW350_RS00205 PF00132 Bacterial transferase hexapeptide (six repeats) DW350_RS00225 PF04542 Sigma-70 region 2 DW350_RS00225 PF08281 Sigma-70, region 4 DW350_RS00255 PF01694 Rhomboid family DW350_RS00260 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DW350_RS00260 PF07992 Pyridine nucleotide-disulphide oxidoreductase DW350_RS00270 PF01432 Peptidase family M3 DW350_RS00285 PF03358 NADPH-dependent FMN reductase DW350_RS00295 PF04445 Putative SAM-dependent methyltransferase DW350_RS00300 PF08534 Redoxin DW350_RS00305 PF00924 Mechanosensitive ion channel DW350_RS00330 PF03358 NADPH-dependent FMN reductase DW350_RS00360 PF03466 LysR substrate binding domain DW350_RS00360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS00365 PF00593 TonB dependent receptor DW350_RS00365 PF07715 TonB-dependent Receptor Plug Domain DW350_RS00380 PF00196 Bacterial regulatory proteins, luxR family DW350_RS00380 PF00072 Response regulator receiver domain DW350_RS00385 PF00672 HAMP domain DW350_RS00385 PF02743 Cache domain DW350_RS00385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW350_RS00390 PF00072 Response regulator receiver domain DW350_RS00395 PF01740 STAS domain DW350_RS00400 PF09078 CheY binding DW350_RS00400 PF02895 Signal transducing histidine kinase, homodimeric domain DW350_RS00400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW350_RS00400 PF01627 Hpt domain DW350_RS00400 PF01584 CheW-like domain DW350_RS00405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW350_RS00405 PF00672 HAMP domain DW350_RS00405 PF12729 Four helix bundle sensory module for signal transduction DW350_RS00410 PF01584 CheW-like domain DW350_RS00415 PF01739 CheR methyltransferase, SAM binding domain DW350_RS00415 PF03705 CheR methyltransferase, all-alpha domain DW350_RS00420 PF00072 Response regulator receiver domain DW350_RS00420 PF01339 CheB methylesterase DW350_RS00430 PF01551 Peptidase family M23 DW350_RS00430 PF04225 Opacity-associated protein A LysM-like domain DW350_RS00435 PF00881 Nitroreductase family DW350_RS00440 PF00675 Insulinase (Peptidase family M16) DW350_RS00440 PF05193 Peptidase M16 inactive domain DW350_RS00440 PF16187 Middle or third domain of peptidase_M16 DW350_RS00445 PF17191 RecG wedge domain DW350_RS00445 PF00271 Helicase conserved C-terminal domain DW350_RS00445 PF00270 DEAD/DEAH box helicase DW350_RS00450 PF12105 SpoU, rRNA methylase, C-terminal DW350_RS00450 PF00588 SpoU rRNA Methylase family DW350_RS00455 PF02824 TGS domain DW350_RS00455 PF04607 Region found in RelA / SpoT proteins DW350_RS00455 PF13291 ACT domain DW350_RS00460 PF01192 RNA polymerase Rpb6 DW350_RS00465 PF00625 Guanylate kinase DW350_RS00475 PF02677 Epoxyqueuosine reductase QueH DW350_RS00480 PF07690 Major Facilitator Superfamily DW350_RS00485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DW350_RS00485 PF00529 HlyD membrane-fusion protein of T1SS DW350_RS00490 PF02321 Outer membrane efflux protein DW350_RS00495 PF00854 POT family DW350_RS00500 PF10397 Adenylosuccinate lyase C-terminus DW350_RS00500 PF00206 Lyase DW350_RS00505 PF03606 C4-dicarboxylate anaerobic carrier DW350_RS00530 PF00072 Response regulator receiver domain DW350_RS00535 PF00672 HAMP domain DW350_RS00535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW350_RS00535 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DW350_RS00535 PF00072 Response regulator receiver domain DW350_RS00535 PF00512 His Kinase A (phospho-acceptor) domain DW350_RS00535 PF01627 Hpt domain DW350_RS00540 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DW350_RS00540 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DW350_RS00550 PF08340 Domain of unknown function (DUF1732) DW350_RS00550 PF03755 YicC-like family, N-terminal region DW350_RS00555 PF03725 3' exoribonuclease family, domain 2 DW350_RS00555 PF01138 3' exoribonuclease family, domain 1 DW350_RS00560 PF00156 Phosphoribosyl transferase domain DW350_RS00565 PF00593 TonB dependent receptor DW350_RS00565 PF07715 TonB-dependent Receptor Plug Domain DW350_RS00575 PF00440 Bacterial regulatory proteins, tetR family DW350_RS00580 PF00692 dUTPase DW350_RS00585 PF04127 DNA / pantothenate metabolism flavoprotein DW350_RS00585 PF02441 Flavoprotein DW350_RS00595 PF04002 RadC-like JAB domain DW350_RS00600 PF00830 Ribosomal L28 family DW350_RS00605 PF00471 Ribosomal protein L33 DW350_RS00615 PF02649 Type I GTP cyclohydrolase folE2 DW350_RS00620 PF00101 Ribulose bisphosphate carboxylase, small chain DW350_RS00620 PF00132 Bacterial transferase hexapeptide (six repeats) DW350_RS00625 PF01979 Amidohydrolase family DW350_RS00635 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DW350_RS00635 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DW350_RS00635 PF06827 Zinc finger found in FPG and IleRS DW350_RS00640 PF00535 Glycosyl transferase family 2 DW350_RS00655 PF00535 Glycosyl transferase family 2 DW350_RS00655 PF01501 Glycosyl transferase family 8 DW350_RS00670 PF01467 Cytidylyltransferase-like DW350_RS00675 PF00672 HAMP domain DW350_RS00675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW350_RS00675 PF12729 Four helix bundle sensory module for signal transduction DW350_RS00685 PF00535 Glycosyl transferase family 2 DW350_RS00690 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DW350_RS00695 PF01370 NAD dependent epimerase/dehydratase family DW350_RS00700 PF00440 Bacterial regulatory proteins, tetR family DW350_RS00700 PF08360 QacR-like protein, C-terminal region DW350_RS00705 PF00155 Aminotransferase class I and II DW350_RS00710 PF08240 Alcohol dehydrogenase GroES-like domain DW350_RS00710 PF00107 Zinc-binding dehydrogenase DW350_RS00715 PF00534 Glycosyl transferases group 1 DW350_RS00715 PF13439 Glycosyltransferase Family 4 DW350_RS00720 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS00725 PF00356 Bacterial regulatory proteins, lacI family DW350_RS00730 PF00581 Rhodanese-like domain DW350_RS00735 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease DW350_RS00735 PF01694 Rhomboid family DW350_RS00740 PF03748 Flagellar basal body-associated protein FliL DW350_RS00745 PF04345 Chorismate lyase DW350_RS00750 PF01040 UbiA prenyltransferase family DW350_RS00760 PF01553 Acyltransferase DW350_RS00765 PF01933 Uncharacterised protein family UPF0052 DW350_RS00770 PF00717 Peptidase S24-like DW350_RS00770 PF01726 LexA DNA binding domain DW350_RS00775 PF02630 SCO1/SenC DW350_RS00780 PF00854 POT family DW350_RS00790 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DW350_RS00800 PF00551 Formyl transferase DW350_RS00800 PF01842 ACT domain DW350_RS00815 PF01226 Formate/nitrite transporter DW350_RS00825 PF00857 Isochorismatase family DW350_RS00845 PF11838 ERAP1-like C-terminal domain DW350_RS00845 PF01433 Peptidase family M1 domain DW350_RS00850 PF01618 MotA/TolQ/ExbB proton channel family DW350_RS00870 PF01554 MatE DW350_RS00880 PF01106 NifU-like domain DW350_RS00880 PF01521 Iron-sulphur cluster biosynthesis DW350_RS00900 PF00873 AcrB/AcrD/AcrF family DW350_RS00910 PF02321 Outer membrane efflux protein DW350_RS00920 PF00561 alpha/beta hydrolase fold DW350_RS00930 PF17674 HHH domain DW350_RS00930 PF00575 S1 RNA binding domain DW350_RS00930 PF16921 Tex protein YqgF-like domain DW350_RS00930 PF09371 Tex-like protein N-terminal domain DW350_RS00935 PF01272 Transcription elongation factor, GreA/GreB, C-term DW350_RS00935 PF03449 Transcription elongation factor, N-terminal DW350_RS00940 PF00072 Response regulator receiver domain DW350_RS00940 PF00486 Transcriptional regulatory protein, C terminal DW350_RS00945 PF00512 His Kinase A (phospho-acceptor) domain DW350_RS00945 PF00672 HAMP domain DW350_RS00945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW350_RS00950 PF02554 Carbon starvation protein CstA DW350_RS00950 PF13722 5TM C-terminal transporter carbon starvation CstA DW350_RS00960 PF02374 Anion-transporting ATPase DW350_RS00975 PF03466 LysR substrate binding domain DW350_RS00975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS00980 PF02333 Phytase DW350_RS01010 PF01293 Phosphoenolpyruvate carboxykinase DW350_RS01015 PF05922 Peptidase inhibitor I9 DW350_RS01015 PF00082 Subtilase family DW350_RS01015 PF13860 FlgD Ig-like domain DW350_RS01015 PF02225 PA domain DW350_RS01020 PF00082 Subtilase family DW350_RS01020 PF13860 FlgD Ig-like domain DW350_RS01020 PF02225 PA domain DW350_RS01020 PF05922 Peptidase inhibitor I9 DW350_RS01025 PF02225 PA domain DW350_RS01025 PF05922 Peptidase inhibitor I9 DW350_RS01025 PF13860 FlgD Ig-like domain DW350_RS01025 PF00082 Subtilase family DW350_RS01045 PF01430 Hsp33 protein DW350_RS01050 PF01479 S4 domain DW350_RS01055 PF11356 Type II secretion system protein C DW350_RS01060 PF03958 Bacterial type II/III secretion system short domain DW350_RS01060 PF00263 Bacterial type II and III secretion system protein DW350_RS01065 PF00437 Type II/IV secretion system protein DW350_RS01070 PF00482 Type II secretion system (T2SS), protein F DW350_RS01075 PF07963 Prokaryotic N-terminal methylation motif DW350_RS01075 PF08334 Type II secretion system (T2SS), protein G DW350_RS01080 PF07963 Prokaryotic N-terminal methylation motif DW350_RS01080 PF12019 Type II transport protein GspH DW350_RS01085 PF07963 Prokaryotic N-terminal methylation motif DW350_RS01085 PF02501 Type II secretion system (T2SS), protein I DW350_RS01090 PF07963 Prokaryotic N-terminal methylation motif DW350_RS01090 PF11612 Type II secretion system (T2SS), protein J DW350_RS01095 PF03934 Type II secretion system (T2SS), protein K DW350_RS01100 PF12693 GspL periplasmic domain DW350_RS01100 PF05134 Type II secretion system (T2SS), protein L DW350_RS01105 PF04612 Type II secretion system (T2SS), protein M DW350_RS01115 PF13419 Haloacid dehalogenase-like hydrolase DW350_RS01120 PF00293 NUDIX domain DW350_RS01125 PF00459 Inositol monophosphatase family DW350_RS01160 PF03471 Transporter associated domain DW350_RS01160 PF02080 TrkA-C domain DW350_RS01160 PF00999 Sodium/hydrogen exchanger family DW350_RS01170 PF03553 Na+/H+ antiporter family DW350_RS01180 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DW350_RS01180 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DW350_RS01185 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DW350_RS01185 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DW350_RS01195 PF03350 Uncharacterized protein family, UPF0114 DW350_RS01205 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DW350_RS01205 PF07992 Pyridine nucleotide-disulphide oxidoreductase DW350_RS01210 PF03466 LysR substrate binding domain DW350_RS01210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS01215 PF07690 Major Facilitator Superfamily DW350_RS01225 PF00440 Bacterial regulatory proteins, tetR family DW350_RS01230 PF05958 tRNA (Uracil-5-)-methyltransferase DW350_RS01235 PF01177 Asp/Glu/Hydantoin racemase DW350_RS01240 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DW350_RS01280 PF01565 FAD binding domain DW350_RS01280 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DW350_RS01285 PF08279 HTH domain DW350_RS01285 PF02237 Biotin protein ligase C terminal domain DW350_RS01285 PF03099 Biotin/lipoate A/B protein ligase family DW350_RS01290 PF03309 Type III pantothenate kinase DW350_RS01310 PF03144 Elongation factor Tu domain 2 DW350_RS01310 PF03143 Elongation factor Tu C-terminal domain DW350_RS01310 PF00009 Elongation factor Tu GTP binding domain DW350_RS01315 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DW350_RS01320 PF00467 KOW motif DW350_RS01320 PF02357 Transcription termination factor nusG DW350_RS01325 PF03946 Ribosomal protein L11, N-terminal domain DW350_RS01325 PF00298 Ribosomal protein L11, RNA binding domain DW350_RS01330 PF00687 Ribosomal protein L1p/L10e family DW350_RS01335 PF00466 Ribosomal protein L10 DW350_RS01340 PF16320 Ribosomal protein L7/L12 dimerisation domain DW350_RS01340 PF00542 Ribosomal protein L7/L12 C-terminal domain DW350_RS01345 PF04563 RNA polymerase beta subunit DW350_RS01345 PF04561 RNA polymerase Rpb2, domain 2 DW350_RS01345 PF04565 RNA polymerase Rpb2, domain 3 DW350_RS01345 PF10385 RNA polymerase beta subunit external 1 domain DW350_RS01345 PF00562 RNA polymerase Rpb2, domain 6 DW350_RS01345 PF04560 RNA polymerase Rpb2, domain 7 DW350_RS01350 PF04983 RNA polymerase Rpb1, domain 3 DW350_RS01350 PF04997 RNA polymerase Rpb1, domain 1 DW350_RS01350 PF00623 RNA polymerase Rpb1, domain 2 DW350_RS01350 PF05000 RNA polymerase Rpb1, domain 4 DW350_RS01350 PF04998 RNA polymerase Rpb1, domain 5 DW350_RS01355 PF00164 Ribosomal protein S12/S23 DW350_RS01360 PF00177 Ribosomal protein S7p/S5e DW350_RS01365 PF00009 Elongation factor Tu GTP binding domain DW350_RS01365 PF00679 Elongation factor G C-terminus DW350_RS01365 PF14492 Elongation Factor G, domain II DW350_RS01365 PF03764 Elongation factor G, domain IV DW350_RS01365 PF03144 Elongation factor Tu domain 2 DW350_RS01370 PF00009 Elongation factor Tu GTP binding domain DW350_RS01370 PF03144 Elongation factor Tu domain 2 DW350_RS01370 PF03143 Elongation factor Tu C-terminal domain DW350_RS01375 PF00338 Ribosomal protein S10p/S20e DW350_RS01380 PF00297 Ribosomal protein L3 DW350_RS01385 PF00573 Ribosomal protein L4/L1 family DW350_RS01390 PF00276 Ribosomal protein L23 DW350_RS01395 PF03947 Ribosomal Proteins L2, C-terminal domain DW350_RS01395 PF00181 Ribosomal Proteins L2, RNA binding domain DW350_RS01400 PF00203 Ribosomal protein S19 DW350_RS01405 PF00237 Ribosomal protein L22p/L17e DW350_RS01410 PF07650 KH domain DW350_RS01410 PF00189 Ribosomal protein S3, C-terminal domain DW350_RS01415 PF00252 Ribosomal protein L16p/L10e DW350_RS01420 PF00831 Ribosomal L29 protein DW350_RS01425 PF00366 Ribosomal protein S17 DW350_RS01430 PF00238 Ribosomal protein L14p/L23e DW350_RS01435 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DW350_RS01440 PF00281 Ribosomal protein L5 DW350_RS01440 PF00673 ribosomal L5P family C-terminus DW350_RS01445 PF00253 Ribosomal protein S14p/S29e DW350_RS01450 PF00410 Ribosomal protein S8 DW350_RS01455 PF00347 Ribosomal protein L6 DW350_RS01460 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DW350_RS01465 PF03719 Ribosomal protein S5, C-terminal domain DW350_RS01465 PF00333 Ribosomal protein S5, N-terminal domain DW350_RS01470 PF00327 Ribosomal protein L30p/L7e DW350_RS01475 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DW350_RS01480 PF00344 SecY translocase DW350_RS01485 PF00444 Ribosomal protein L36 DW350_RS01490 PF00416 Ribosomal protein S13/S18 DW350_RS01495 PF00411 Ribosomal protein S11 DW350_RS01500 PF01479 S4 domain DW350_RS01500 PF00163 Ribosomal protein S4/S9 N-terminal domain DW350_RS01505 PF01000 RNA polymerase Rpb3/RpoA insert domain DW350_RS01505 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DW350_RS01505 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DW350_RS01510 PF01196 Ribosomal protein L17 DW350_RS01555 PF00326 Prolyl oligopeptidase family DW350_RS01555 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region DW350_RS01585 PF01339 CheB methylesterase DW350_RS01585 PF00072 Response regulator receiver domain DW350_RS01595 PF00311 Phosphoenolpyruvate carboxylase DW350_RS01600 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DW350_RS01605 PF03741 Integral membrane protein TerC family DW350_RS01610 PF07687 Peptidase dimerisation domain DW350_RS01610 PF01546 Peptidase family M20/M25/M40 DW350_RS01615 PF01118 Semialdehyde dehydrogenase, NAD binding domain DW350_RS01615 PF02774 Semialdehyde dehydrogenase, dimerisation domain DW350_RS01620 PF00696 Amino acid kinase family DW350_RS01625 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DW350_RS01625 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DW350_RS01630 PF00764 Arginosuccinate synthase DW350_RS01635 PF14698 Argininosuccinate lyase C-terminal DW350_RS01635 PF00583 Acetyltransferase (GNAT) family DW350_RS01635 PF00206 Lyase DW350_RS01640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW350_RS01640 PF13492 GAF domain DW350_RS01640 PF13493 Domain of unknown function (DUF4118) DW350_RS01640 PF00512 His Kinase A (phospho-acceptor) domain DW350_RS01640 PF02702 Osmosensitive K+ channel His kinase sensor domain DW350_RS01645 PF00072 Response regulator receiver domain DW350_RS01645 PF00486 Transcriptional regulatory protein, C terminal DW350_RS01650 PF00210 Ferritin-like domain DW350_RS01655 PF04324 BFD-like [2Fe-2S] binding domain DW350_RS01675 PF04350 Pilus assembly protein, PilO DW350_RS01685 PF11741 AMIN domain DW350_RS01685 PF03958 Bacterial type II/III secretion system short domain DW350_RS01685 PF07660 Secretin and TonB N terminus short domain DW350_RS01685 PF00263 Bacterial type II and III secretion system protein DW350_RS01690 PF01202 Shikimate kinase DW350_RS01695 PF01761 3-dehydroquinate synthase DW350_RS01705 PF02086 D12 class N6 adenine-specific DNA methyltransferase DW350_RS01715 PF00171 Aldehyde dehydrogenase family DW350_RS01720 PF00834 Ribulose-phosphate 3 epimerase family DW350_RS01725 PF13419 Haloacid dehalogenase-like hydrolase DW350_RS01730 PF00579 tRNA synthetases class I (W and Y) DW350_RS01735 PF00593 TonB dependent receptor DW350_RS01735 PF07715 TonB-dependent Receptor Plug Domain DW350_RS01740 PF00873 AcrB/AcrD/AcrF family DW350_RS01745 PF00117 Glutamine amidotransferase class-I DW350_RS01750 PF00202 Aminotransferase class-III DW350_RS01755 PF04958 Arginine N-succinyltransferase beta subunit DW350_RS01760 PF00171 Aldehyde dehydrogenase family DW350_RS01775 PF17863 AAA lid domain DW350_RS01775 PF07726 ATPase family associated with various cellular activities (AAA) DW350_RS01785 PF01841 Transglutaminase-like superfamily DW350_RS01785 PF13559 Domain of unknown function (DUF4129) DW350_RS01785 PF11992 Domain of unknown function (DUF3488) DW350_RS01790 PF05127 Helicase DW350_RS01790 PF17176 tRNA-binding domain DW350_RS01790 PF13718 GNAT acetyltransferase 2 DW350_RS01790 PF08351 Domain of unknown function (DUF1726) DW350_RS01795 PF13545 Crp-like helix-turn-helix domain DW350_RS01795 PF00027 Cyclic nucleotide-binding domain DW350_RS01800 PF02566 OsmC-like protein DW350_RS01805 PF02675 S-adenosylmethionine decarboxylase DW350_RS01815 PF03880 DbpA RNA binding domain DW350_RS01815 PF00271 Helicase conserved C-terminal domain DW350_RS01815 PF12343 Cold shock protein DEAD box A DW350_RS01815 PF00270 DEAD/DEAH box helicase DW350_RS01820 PF07690 Major Facilitator Superfamily DW350_RS01835 PF00072 Response regulator receiver domain DW350_RS01835 PF02954 Bacterial regulatory protein, Fis family DW350_RS01835 PF00158 Sigma-54 interaction domain DW350_RS01840 PF00512 His Kinase A (phospho-acceptor) domain DW350_RS01840 PF00989 PAS fold DW350_RS01840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW350_RS01845 PF01654 Cytochrome bd terminal oxidase subunit I DW350_RS01850 PF02322 Cytochrome bd terminal oxidase subunit II DW350_RS01860 PF00330 Aconitase family (aconitate hydratase) DW350_RS01860 PF00694 Aconitase C-terminal domain DW350_RS01865 PF07690 Major Facilitator Superfamily DW350_RS01890 PF13673 Acetyltransferase (GNAT) domain DW350_RS01895 PF00293 NUDIX domain DW350_RS01900 PF00485 Phosphoribulokinase / Uridine kinase family DW350_RS01905 PF06794 Uncharacterised protein family (UPF0270) DW350_RS01910 PF01810 LysE type translocator DW350_RS01915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS01915 PF03466 LysR substrate binding domain DW350_RS01920 PF00561 alpha/beta hydrolase fold DW350_RS01925 PF07995 Glucose / Sorbosone dehydrogenase DW350_RS01935 PF07715 TonB-dependent Receptor Plug Domain DW350_RS01935 PF00593 TonB dependent receptor DW350_RS01950 PF03466 LysR substrate binding domain DW350_RS01950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS01975 PF02685 Glucokinase DW350_RS01980 PF07690 Major Facilitator Superfamily DW350_RS01995 PF00005 ABC transporter DW350_RS01995 PF12848 ABC transporter DW350_RS02000 PF09526 Probable metal-binding protein (DUF2387) DW350_RS02005 PF04102 SlyX DW350_RS02015 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DW350_RS02015 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DW350_RS02025 PF00593 TonB dependent receptor DW350_RS02025 PF07660 Secretin and TonB N terminus short domain DW350_RS02025 PF07715 TonB-dependent Receptor Plug Domain DW350_RS02030 PF01124 MAPEG family DW350_RS02045 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ DW350_RS02050 PF00293 NUDIX domain DW350_RS02050 PF09297 NADH pyrophosphatase zinc ribbon domain DW350_RS02055 PF00258 Flavodoxin DW350_RS02055 PF00667 FAD binding domain DW350_RS02055 PF00175 Oxidoreductase NAD-binding domain DW350_RS02060 PF01208 Uroporphyrinogen decarboxylase (URO-D) DW350_RS02065 PF08448 PAS fold DW350_RS02065 PF00563 EAL domain DW350_RS02065 PF13426 PAS domain DW350_RS02065 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS02065 PF08447 PAS fold DW350_RS02065 PF05231 MASE1 DW350_RS02075 PF00465 Iron-containing alcohol dehydrogenase DW350_RS02080 PF12833 Helix-turn-helix domain DW350_RS02080 PF02311 AraC-like ligand binding domain DW350_RS02085 PF00171 Aldehyde dehydrogenase family DW350_RS02090 PF00155 Aminotransferase class I and II DW350_RS02095 PF02540 NAD synthase DW350_RS02095 PF00117 Glutamine amidotransferase class-I DW350_RS02095 PF00958 GMP synthase C terminal domain DW350_RS02100 PF00793 DAHP synthetase I family DW350_RS02110 PF01938 TRAM domain DW350_RS02110 PF05958 tRNA (Uracil-5-)-methyltransferase DW350_RS02115 PF01551 Peptidase family M23 DW350_RS02115 PF08525 Opacity-associated protein A N-terminal motif DW350_RS02115 PF01476 LysM domain DW350_RS02125 PF03167 Uracil DNA glycosylase superfamily DW350_RS02135 PF02678 Pirin DW350_RS02135 PF05726 Pirin C-terminal cupin domain DW350_RS02140 PF02678 Pirin DW350_RS02140 PF05726 Pirin C-terminal cupin domain DW350_RS02155 PF02770 Acyl-CoA dehydrogenase, middle domain DW350_RS02155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DW350_RS02155 PF18158 Adaptive response protein AidB N-terminal domain DW350_RS02165 PF13537 Glutamine amidotransferase domain DW350_RS02165 PF00733 Asparagine synthase DW350_RS02175 PF17283 SprT-like zinc ribbon domain DW350_RS02175 PF10263 SprT-like family DW350_RS02190 PF02773 S-adenosylmethionine synthetase, C-terminal domain DW350_RS02190 PF00438 S-adenosylmethionine synthetase, N-terminal domain DW350_RS02190 PF02772 S-adenosylmethionine synthetase, central domain DW350_RS02195 PF02779 Transketolase, pyrimidine binding domain DW350_RS02195 PF02780 Transketolase, C-terminal domain DW350_RS02195 PF00456 Transketolase, thiamine diphosphate binding domain DW350_RS02200 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DW350_RS02200 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DW350_RS02205 PF00162 Phosphoglycerate kinase DW350_RS02210 PF01116 Fructose-bisphosphate aldolase class-II DW350_RS02235 PF03412 Peptidase C39 family DW350_RS02235 PF00005 ABC transporter DW350_RS02235 PF00664 ABC transporter transmembrane region DW350_RS02240 PF00529 HlyD membrane-fusion protein of T1SS DW350_RS02240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DW350_RS02245 PF02321 Outer membrane efflux protein DW350_RS02250 PF05736 OprF membrane domain DW350_RS02250 PF00691 OmpA family DW350_RS02265 PF03279 Bacterial lipid A biosynthesis acyltransferase DW350_RS02270 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DW350_RS02270 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DW350_RS02270 PF01842 ACT domain DW350_RS02275 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DW350_RS02280 PF01812 5-formyltetrahydrofolate cyclo-ligase family DW350_RS02290 PF05164 Cell division protein ZapA DW350_RS02295 PF03695 Uncharacterised protein family (UPF0149) DW350_RS02300 PF01494 FAD binding domain DW350_RS02305 PF01494 FAD binding domain DW350_RS02310 PF08669 Glycine cleavage T-protein C-terminal barrel domain DW350_RS02310 PF01571 Aminomethyltransferase folate-binding domain DW350_RS02315 PF01597 Glycine cleavage H-protein DW350_RS02320 PF02347 Glycine cleavage system P-protein DW350_RS02335 PF00593 TonB dependent receptor DW350_RS02335 PF07715 TonB-dependent Receptor Plug Domain DW350_RS02370 PF03969 AFG1-like ATPase DW350_RS02375 PF03969 AFG1-like ATPase DW350_RS02385 PF13192 Thioredoxin domain DW350_RS02385 PF07992 Pyridine nucleotide-disulphide oxidoreductase DW350_RS02390 PF10417 C-terminal domain of 1-Cys peroxiredoxin DW350_RS02390 PF00578 AhpC/TSA family DW350_RS02395 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DW350_RS02395 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DW350_RS02400 PF16591 Helical bimodular sensor domain DW350_RS02400 PF00672 HAMP domain DW350_RS02400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW350_RS02415 PF03965 Penicillinase repressor DW350_RS02420 PF01053 Cys/Met metabolism PLP-dependent enzyme DW350_RS02425 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) DW350_RS02430 PF02566 OsmC-like protein DW350_RS02435 PF01047 MarR family DW350_RS02465 PF09278 MerR, DNA binding DW350_RS02465 PF00376 MerR family regulatory protein DW350_RS02475 PF02683 Cytochrome C biogenesis protein transmembrane region DW350_RS02475 PF11412 Disulphide bond corrector protein DsbC DW350_RS02490 PF00166 Chaperonin 10 Kd subunit DW350_RS02495 PF00118 TCP-1/cpn60 chaperonin family DW350_RS02510 PF01966 HD domain DW350_RS02510 PF13286 Phosphohydrolase-associated domain DW350_RS02520 PF07152 YaeQ protein DW350_RS02525 PF07715 TonB-dependent Receptor Plug Domain DW350_RS02525 PF00593 TonB dependent receptor DW350_RS02545 PF03466 LysR substrate binding domain DW350_RS02545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS02550 PF00248 Aldo/keto reductase family DW350_RS02555 PF08448 PAS fold DW350_RS02555 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS02560 PF01738 Dienelactone hydrolase family DW350_RS02570 PF04055 Radical SAM superfamily DW350_RS02575 PF08207 Elongation factor P (EF-P) KOW-like domain DW350_RS02575 PF01132 Elongation factor P (EF-P) OB domain DW350_RS02575 PF09285 Elongation factor P, C-terminal DW350_RS02585 PF00005 ABC transporter DW350_RS02590 PF01032 FecCD transport family DW350_RS02600 PF05656 Protein of unknown function (DUF805) DW350_RS02605 PF07715 TonB-dependent Receptor Plug Domain DW350_RS02605 PF00593 TonB dependent receptor DW350_RS02620 PF12795 Mechanosensitive ion channel porin domain DW350_RS02620 PF00924 Mechanosensitive ion channel DW350_RS02620 PF12794 Mechanosensitive ion channel inner membrane domain 1 DW350_RS02630 PF02666 Phosphatidylserine decarboxylase DW350_RS02635 PF03193 RsgA GTPase DW350_RS02640 PF00929 Exonuclease DW350_RS02660 PF00072 Response regulator receiver domain DW350_RS02660 PF01627 Hpt domain DW350_RS02660 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DW350_RS02660 PF00512 His Kinase A (phospho-acceptor) domain DW350_RS02660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW350_RS02660 PF00672 HAMP domain DW350_RS02665 PF00072 Response regulator receiver domain DW350_RS02665 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS02670 PF04185 Phosphoesterase family DW350_RS02670 PF05506 Domain of unknown function (DUF756) DW350_RS02690 PF08331 Domain of unknown function (DUF1730) DW350_RS02695 PF03853 YjeF-related protein N-terminus DW350_RS02695 PF01256 Carbohydrate kinase DW350_RS02700 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DW350_RS02705 PF01520 N-acetylmuramoyl-L-alanine amidase DW350_RS02710 PF08676 MutL C terminal dimerisation domain DW350_RS02710 PF01119 DNA mismatch repair protein, C-terminal domain DW350_RS02720 PF17209 Hfq protein DW350_RS02725 PF01926 50S ribosome-binding GTPase DW350_RS02725 PF13167 GTP-binding GTPase N-terminal DW350_RS02725 PF16360 GTP-binding GTPase Middle Region DW350_RS02730 PF01145 SPFH domain / Band 7 family DW350_RS02730 PF12221 Bacterial membrane protein N terminal DW350_RS02735 PF01145 SPFH domain / Band 7 family DW350_RS02750 PF00709 Adenylosuccinate synthetase DW350_RS02755 PF08238 Sel1 repeat DW350_RS02760 PF11893 Domain of unknown function (DUF3413) DW350_RS02760 PF00884 Sulfatase DW350_RS02765 PF08461 Ribonuclease R winged-helix domain DW350_RS02765 PF00575 S1 RNA binding domain DW350_RS02765 PF08206 Ribonuclease B OB domain DW350_RS02765 PF00773 RNB domain DW350_RS02765 PF17876 Cold shock domain DW350_RS02770 PF08032 RNA 2'-O ribose methyltransferase substrate binding DW350_RS02770 PF00588 SpoU rRNA Methylase family DW350_RS02780 PF01250 Ribosomal protein S6 DW350_RS02785 PF00436 Single-strand binding protein family DW350_RS02790 PF01084 Ribosomal protein S18 DW350_RS02795 PF01281 Ribosomal protein L9, N-terminal domain DW350_RS02795 PF03948 Ribosomal protein L9, C-terminal domain DW350_RS02800 PF01593 Flavin containing amine oxidoreductase DW350_RS02805 PF02976 DNA mismatch repair enzyme MutH DW350_RS02810 PF00293 NUDIX domain DW350_RS02815 PF05524 PEP-utilising enzyme, N-terminal DW350_RS02815 PF01590 GAF domain DW350_RS02815 PF02896 PEP-utilising enzyme, TIM barrel domain DW350_RS02815 PF00391 PEP-utilising enzyme, mobile domain DW350_RS02825 PF01790 Prolipoprotein diacylglyceryl transferase DW350_RS02830 PF00303 Thymidylate synthase DW350_RS02835 PF06965 Na+/H+ antiporter 1 DW350_RS02845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS02845 PF03466 LysR substrate binding domain DW350_RS02855 PF00149 Calcineurin-like phosphoesterase DW350_RS02860 PF01022 Bacterial regulatory protein, arsR family DW350_RS02865 PF01649 Ribosomal protein S20 DW350_RS02870 PF03023 Lipid II flippase MurJ DW350_RS02875 PF06574 FAD synthetase DW350_RS02875 PF01687 Riboflavin kinase DW350_RS02880 PF06827 Zinc finger found in FPG and IleRS DW350_RS02880 PF00133 tRNA synthetases class I (I, L, M and V) DW350_RS02880 PF08264 Anticodon-binding domain of tRNA DW350_RS02885 PF01252 Signal peptidase (SPase) II DW350_RS02890 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DW350_RS02895 PF02401 LytB protein DW350_RS02905 PF07963 Prokaryotic N-terminal methylation motif DW350_RS02920 PF07963 Prokaryotic N-terminal methylation motif DW350_RS02920 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor DW350_RS02940 PF07963 Prokaryotic N-terminal methylation motif DW350_RS02940 PF00114 Pilin (bacterial filament) DW350_RS02960 PF00543 Nitrogen regulatory protein P-II DW350_RS02965 PF13525 Outer membrane lipoprotein DW350_RS02970 PF01479 S4 domain DW350_RS02970 PF00849 RNA pseudouridylate synthase DW350_RS02975 PF02578 Multi-copper polyphenol oxidoreductase laccase DW350_RS02980 PF17871 AAA lid domain DW350_RS02980 PF02861 Clp amino terminal domain, pathogenicity island component DW350_RS02980 PF10431 C-terminal, D2-small domain, of ClpB protein DW350_RS02980 PF07724 AAA domain (Cdc48 subfamily) DW350_RS02980 PF00004 ATPase family associated with various cellular activities (AAA) DW350_RS02990 PF01066 CDP-alcohol phosphatidyltransferase DW350_RS03040 PF00583 Acetyltransferase (GNAT) family DW350_RS03045 PF16658 Class II release factor RF3, C-terminal domain DW350_RS03045 PF00009 Elongation factor Tu GTP binding domain DW350_RS03045 PF03144 Elongation factor Tu domain 2 DW350_RS03050 PF01026 TatD related DNase DW350_RS03055 PF07670 Nucleoside recognition DW350_RS03055 PF07662 Na+ dependent nucleoside transporter C-terminus DW350_RS03055 PF01773 Na+ dependent nucleoside transporter N-terminus DW350_RS03060 PF01791 DeoC/LacD family aldolase DW350_RS03065 PF02885 Glycosyl transferase family, helical bundle domain DW350_RS03065 PF00591 Glycosyl transferase family, a/b domain DW350_RS03065 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DW350_RS03070 PF01048 Phosphorylase superfamily DW350_RS03080 PF18429 Domain of unknown function (DUF5609) DW350_RS03095 PF18073 Rubredoxin metal binding domain DW350_RS03100 PF07238 PilZ domain DW350_RS03110 PF12848 ABC transporter DW350_RS03110 PF00005 ABC transporter DW350_RS03115 PF00464 Serine hydroxymethyltransferase DW350_RS03120 PF03477 ATP cone domain DW350_RS03125 PF01872 RibD C-terminal domain DW350_RS03125 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DW350_RS03130 PF00677 Lumazine binding domain DW350_RS03135 PF00925 GTP cyclohydrolase II DW350_RS03135 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DW350_RS03140 PF00885 6,7-dimethyl-8-ribityllumazine synthase DW350_RS03145 PF01029 NusB family DW350_RS03150 PF02769 AIR synthase related protein, C-terminal domain DW350_RS03150 PF00586 AIR synthase related protein, N-terminal domain DW350_RS03155 PF04608 Phosphatidylglycerophosphatase A DW350_RS03160 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS03165 PF02780 Transketolase, C-terminal domain DW350_RS03165 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DW350_RS03165 PF02779 Transketolase, pyrimidine binding domain DW350_RS03170 PF00348 Polyprenyl synthetase DW350_RS03175 PF02609 Exonuclease VII small subunit DW350_RS03180 PF01618 MotA/TolQ/ExbB proton channel family DW350_RS03185 PF13677 Membrane MotB of proton-channel complex MotA/MotB DW350_RS03185 PF00691 OmpA family DW350_RS03185 PF00691 OmpA family DW350_RS03185 PF13677 Membrane MotB of proton-channel complex MotA/MotB DW350_RS03190 PF02568 Thiamine biosynthesis protein (ThiI) DW350_RS03190 PF02926 THUMP domain DW350_RS03195 PF08546 Ketopantoate reductase PanE/ApbA C terminal DW350_RS03195 PF02558 Ketopantoate reductase PanE/ApbA DW350_RS03205 PF07690 Major Facilitator Superfamily DW350_RS03215 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DW350_RS03235 PF05175 Methyltransferase small domain DW350_RS03245 PF01722 BolA-like protein DW350_RS03250 PF11973 NQRA C-terminal domain DW350_RS03250 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) DW350_RS03255 PF03116 NQR2, RnfD, RnfE family DW350_RS03260 PF04205 FMN-binding domain DW350_RS03265 PF02508 Rnf-Nqr subunit, membrane protein DW350_RS03270 PF02508 Rnf-Nqr subunit, membrane protein DW350_RS03275 PF00970 Oxidoreductase FAD-binding domain DW350_RS03275 PF00111 2Fe-2S iron-sulfur cluster binding domain DW350_RS03275 PF00175 Oxidoreductase NAD-binding domain DW350_RS03280 PF02424 ApbE family DW350_RS03300 PF00593 TonB dependent receptor DW350_RS03315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW350_RS03315 PF00512 His Kinase A (phospho-acceptor) domain DW350_RS03320 PF02954 Bacterial regulatory protein, Fis family DW350_RS03320 PF00072 Response regulator receiver domain DW350_RS03320 PF00158 Sigma-54 interaction domain DW350_RS03325 PF18381 YcaO cyclodehydratase C-terminal domain DW350_RS03325 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding DW350_RS03335 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DW350_RS03340 PF00884 Sulfatase DW350_RS03340 PF08019 Phosphoethanolamine transferase EptA/EptB DW350_RS03350 PF13409 Glutathione S-transferase, N-terminal domain DW350_RS03355 PF02386 Cation transport protein DW350_RS03360 PF02080 TrkA-C domain DW350_RS03360 PF02254 TrkA-N domain DW350_RS03370 PF13617 YnbE-like lipoprotein DW350_RS03375 PF07027 Protein of unknown function (DUF1318) DW350_RS03380 PF00563 EAL domain DW350_RS03380 PF03707 Bacterial signalling protein N terminal repeat DW350_RS03380 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS03385 PF07729 FCD domain DW350_RS03385 PF00392 Bacterial regulatory proteins, gntR family DW350_RS03395 PF03422 Carbohydrate binding module (family 6) DW350_RS03395 PF04616 Glycosyl hydrolases family 43 DW350_RS03400 PF00920 Dehydratase family DW350_RS03410 PF00171 Aldehyde dehydrogenase family DW350_RS03415 PF01263 Aldose 1-epimerase DW350_RS03420 PF13407 Periplasmic binding protein domain DW350_RS03425 PF00005 ABC transporter DW350_RS03430 PF02653 Branched-chain amino acid transport system / permease component DW350_RS03435 PF02653 Branched-chain amino acid transport system / permease component DW350_RS03440 PF08450 SMP-30/Gluconolactonase/LRE-like region DW350_RS03445 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain DW350_RS03445 PF04616 Glycosyl hydrolases family 43 DW350_RS03465 PF00593 TonB dependent receptor DW350_RS03465 PF07715 TonB-dependent Receptor Plug Domain DW350_RS03470 PF00465 Iron-containing alcohol dehydrogenase DW350_RS03475 PF01047 MarR family DW350_RS03480 PF02321 Outer membrane efflux protein DW350_RS03485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DW350_RS03485 PF00529 HlyD membrane-fusion protein of T1SS DW350_RS03490 PF07690 Major Facilitator Superfamily DW350_RS03495 PF00563 EAL domain DW350_RS03495 PF03707 Bacterial signalling protein N terminal repeat DW350_RS03495 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS03500 PF02447 GntP family permease DW350_RS03515 PF07690 Major Facilitator Superfamily DW350_RS03535 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS03535 PF00072 Response regulator receiver domain DW350_RS03540 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain DW350_RS03540 PF04616 Glycosyl hydrolases family 43 DW350_RS03550 PF04616 Glycosyl hydrolases family 43 DW350_RS03555 PF10566 Glycoside hydrolase 97 DW350_RS03555 PF14508 Glycosyl-hydrolase 97 N-terminal DW350_RS03555 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation DW350_RS03560 PF04616 Glycosyl hydrolases family 43 DW350_RS03560 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain DW350_RS03575 PF00781 Diacylglycerol kinase catalytic domain DW350_RS03585 PF00512 His Kinase A (phospho-acceptor) domain DW350_RS03585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW350_RS03585 PF00672 HAMP domain DW350_RS03590 PF00486 Transcriptional regulatory protein, C terminal DW350_RS03590 PF00072 Response regulator receiver domain DW350_RS03605 PF00474 Sodium:solute symporter family DW350_RS03610 PF01032 FecCD transport family DW350_RS03615 PF00005 ABC transporter DW350_RS03620 PF01497 Periplasmic binding protein DW350_RS03650 PF13649 Methyltransferase domain DW350_RS03660 PF01709 Transcriptional regulator DW350_RS03670 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DW350_RS03675 PF13618 Gluconate 2-dehydrogenase subunit 3 DW350_RS03680 PF00732 GMC oxidoreductase DW350_RS03680 PF05199 GMC oxidoreductase DW350_RS03685 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DW350_RS03685 PF00034 Cytochrome c DW350_RS03695 PF03466 LysR substrate binding domain DW350_RS03695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS03720 PF00005 ABC transporter DW350_RS03725 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DW350_RS03735 PF01292 Prokaryotic cytochrome b561 DW350_RS03740 PF00199 Catalase DW350_RS03745 PF04542 Sigma-70 region 2 DW350_RS03745 PF08281 Sigma-70, region 4 DW350_RS03755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS03755 PF03466 LysR substrate binding domain DW350_RS03770 PF08659 KR domain DW350_RS03770 PF02801 Beta-ketoacyl synthase, C-terminal domain DW350_RS03770 PF08240 Alcohol dehydrogenase GroES-like domain DW350_RS03770 PF00550 Phosphopantetheine attachment site DW350_RS03770 PF14765 Polyketide synthase dehydratase DW350_RS03770 PF16197 Ketoacyl-synthetase C-terminal extension DW350_RS03770 PF00109 Beta-ketoacyl synthase, N-terminal domain DW350_RS03770 PF00698 Acyl transferase domain DW350_RS03775 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG DW350_RS03785 PF01039 Carboxyl transferase domain DW350_RS03785 PF17848 Acetyl-coA carboxylase zinc finger domain DW350_RS03790 PF06857 Malonate decarboxylase delta subunit (MdcD) DW350_RS03795 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase DW350_RS03800 PF16957 Malonate decarboxylase, alpha subunit, transporter DW350_RS03815 PF12833 Helix-turn-helix domain DW350_RS03815 PF06719 AraC-type transcriptional regulator N-terminus DW350_RS03830 PF02311 AraC-like ligand binding domain DW350_RS03830 PF12833 Helix-turn-helix domain DW350_RS03835 PF00892 EamA-like transporter family DW350_RS03840 PF00593 TonB dependent receptor DW350_RS03840 PF07715 TonB-dependent Receptor Plug Domain DW350_RS03850 PF02470 MlaD protein DW350_RS03855 PF04403 Paraquat-inducible protein A DW350_RS03865 PF13098 Thioredoxin-like domain DW350_RS03870 PF00679 Elongation factor G C-terminus DW350_RS03870 PF03764 Elongation factor G, domain IV DW350_RS03870 PF00009 Elongation factor Tu GTP binding domain DW350_RS03870 PF03144 Elongation factor Tu domain 2 DW350_RS03870 PF14492 Elongation Factor G, domain II DW350_RS03875 PF00106 short chain dehydrogenase DW350_RS03885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS03885 PF03466 LysR substrate binding domain DW350_RS03890 PF00873 AcrB/AcrD/AcrF family DW350_RS03895 PF13533 Biotin-lipoyl like DW350_RS03900 PF05724 Thiopurine S-methyltransferase (TPMT) DW350_RS03905 PF00107 Zinc-binding dehydrogenase DW350_RS03905 PF08240 Alcohol dehydrogenase GroES-like domain DW350_RS03910 PF16925 Tetracyclin repressor-like, C-terminal domain DW350_RS03910 PF00440 Bacterial regulatory proteins, tetR family DW350_RS03915 PF03060 Nitronate monooxygenase DW350_RS03945 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DW350_RS03955 PF01184 GPR1/FUN34/yaaH family DW350_RS03970 PF03956 Lysine exporter LysO DW350_RS03980 PF04546 Sigma-70, non-essential region DW350_RS03980 PF04545 Sigma-70, region 4 DW350_RS03980 PF04539 Sigma-70 region 3 DW350_RS03980 PF04542 Sigma-70 region 2 DW350_RS03980 PF00140 Sigma-70 factor, region 1.2 DW350_RS03980 PF03979 Sigma-70 factor, region 1.1 DW350_RS03985 PF08278 DNA primase DnaG DnaB-binding DW350_RS03985 PF08275 DNA primase catalytic core, N-terminal domain DW350_RS03985 PF01807 CHC2 zinc finger DW350_RS03985 PF10410 DnaB-helicase binding domain of primase DW350_RS03990 PF09424 Yqey-like protein DW350_RS03995 PF01165 Ribosomal protein S21 DW350_RS04000 PF00814 Glycoprotease family DW350_RS04005 PF02660 Glycerol-3-phosphate acyltransferase DW350_RS04010 PF02152 Dihydroneopterin aldolase DW350_RS04015 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DW350_RS04020 PF01743 Poly A polymerase head domain DW350_RS04020 PF01966 HD domain DW350_RS04020 PF12627 Probable RNA and SrmB- binding site of polymerase A DW350_RS04025 PF13401 AAA domain DW350_RS04025 PF01471 Putative peptidoglycan binding domain DW350_RS04045 PF13505 Outer membrane protein beta-barrel domain DW350_RS04050 PF04474 Protein of unknown function (DUF554) DW350_RS04055 PF00171 Aldehyde dehydrogenase family DW350_RS04055 PF18327 Proline utilization A proline dehydrogenase N-terminal domain DW350_RS04055 PF01619 Proline dehydrogenase DW350_RS04055 PF14850 DNA-binding domain of Proline dehydrogenase DW350_RS04065 PF08239 Bacterial SH3 domain DW350_RS04070 PF01384 Phosphate transporter family DW350_RS04075 PF01865 Protein of unknown function DUF47 DW350_RS04080 PF01928 CYTH domain DW350_RS04085 PF07885 Ion channel DW350_RS04100 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) DW350_RS04105 PF03710 Glutamate-ammonia ligase adenylyltransferase DW350_RS04105 PF08335 GlnD PII-uridylyltransferase DW350_RS04110 PF03279 Bacterial lipid A biosynthesis acyltransferase DW350_RS04115 PF01467 Cytidylyltransferase-like DW350_RS04115 PF00294 pfkB family carbohydrate kinase DW350_RS04120 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DW350_RS04125 PF02321 Outer membrane efflux protein DW350_RS04130 PF00293 NUDIX domain DW350_RS04140 PF00149 Calcineurin-like phosphoesterase DW350_RS04145 PF05728 Uncharacterised protein family (UPF0227) DW350_RS04150 PF00986 DNA gyrase B subunit, carboxyl terminus DW350_RS04150 PF00204 DNA gyrase B DW350_RS04150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW350_RS04150 PF01751 Toprim domain DW350_RS04155 PF00563 EAL domain DW350_RS04155 PF08448 PAS fold DW350_RS04155 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS04160 PF00521 DNA gyrase/topoisomerase IV, subunit A DW350_RS04160 PF03989 DNA gyrase C-terminal domain, beta-propeller DW350_RS04170 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DW350_RS04175 PF01553 Acyltransferase DW350_RS04180 PF06877 Regulator of ribonuclease activity B DW350_RS04190 PF07690 Major Facilitator Superfamily DW350_RS04195 PF00672 HAMP domain DW350_RS04195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW350_RS04205 PF00893 Small Multidrug Resistance protein DW350_RS04210 PF00563 EAL domain DW350_RS04210 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS04210 PF08447 PAS fold DW350_RS04210 PF08448 PAS fold DW350_RS04215 PF08264 Anticodon-binding domain of tRNA DW350_RS04215 PF00133 tRNA synthetases class I (I, L, M and V) DW350_RS04215 PF10458 Valyl tRNA synthetase tRNA binding arm DW350_RS04220 PF04364 DNA polymerase III chi subunit, HolC DW350_RS04225 PF00883 Cytosol aminopeptidase family, catalytic domain DW350_RS04225 PF02789 Cytosol aminopeptidase family, N-terminal domain DW350_RS04230 PF03739 Lipopolysaccharide export system permease LptF/LptG DW350_RS04235 PF03739 Lipopolysaccharide export system permease LptF/LptG DW350_RS04240 PF03099 Biotin/lipoate A/B protein ligase family DW350_RS04240 PF10437 Bacterial lipoate protein ligase C-terminus DW350_RS04265 PF00588 SpoU rRNA Methylase family DW350_RS04270 PF00245 Alkaline phosphatase DW350_RS04275 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) DW350_RS04280 PF03167 Uracil DNA glycosylase superfamily DW350_RS04295 PF00342 Phosphoglucose isomerase DW350_RS04300 PF00923 Transaldolase/Fructose-6-phosphate aldolase DW350_RS04305 PF01661 Macro domain DW350_RS04310 PF13609 Gram-negative porin DW350_RS04315 PF00072 Response regulator receiver domain DW350_RS04315 PF00486 Transcriptional regulatory protein, C terminal DW350_RS04320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW350_RS04320 PF00512 His Kinase A (phospho-acceptor) domain DW350_RS04320 PF00989 PAS fold DW350_RS04320 PF11808 Phosphate regulon sensor protein PhoR DW350_RS04325 PF12849 PBP superfamily domain DW350_RS04330 PF00797 N-acetyltransferase DW350_RS04335 PF02541 Ppx/GppA phosphatase family DW350_RS04340 PF17941 Polyphosphate kinase C-terminal domain 1 DW350_RS04340 PF13089 Polyphosphate kinase N-terminal domain DW350_RS04340 PF13090 Polyphosphate kinase C-terminal domain 2 DW350_RS04340 PF02503 Polyphosphate kinase middle domain DW350_RS04350 PF00528 Binding-protein-dependent transport system inner membrane component DW350_RS04355 PF00528 Binding-protein-dependent transport system inner membrane component DW350_RS04360 PF00005 ABC transporter DW350_RS04365 PF01895 PhoU domain DW350_RS04370 PF03976 Polyphosphate kinase 2 (PPK2) DW350_RS04385 PF03466 LysR substrate binding domain DW350_RS04385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS04390 PF01274 Malate synthase DW350_RS04395 PF00463 Isocitrate lyase family DW350_RS04405 PF13193 AMP-binding enzyme C-terminal domain DW350_RS04405 PF00501 AMP-binding enzyme DW350_RS04420 PF00486 Transcriptional regulatory protein, C terminal DW350_RS04420 PF00072 Response regulator receiver domain DW350_RS04425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW350_RS04425 PF00512 His Kinase A (phospho-acceptor) domain DW350_RS04425 PF08521 Two-component sensor kinase N-terminal DW350_RS04430 PF02547 Queuosine biosynthesis protein DW350_RS04435 PF01702 Queuine tRNA-ribosyltransferase DW350_RS04440 PF02699 Preprotein translocase subunit DW350_RS04445 PF07549 SecD/SecF GG Motif DW350_RS04445 PF02355 Protein export membrane protein DW350_RS04445 PF13721 SecD export protein N-terminal TM region DW350_RS04450 PF07549 SecD/SecF GG Motif DW350_RS04450 PF02355 Protein export membrane protein DW350_RS04460 PF00884 Sulfatase DW350_RS04465 PF00459 Inositol monophosphatase family DW350_RS04470 PF00588 SpoU rRNA Methylase family DW350_RS04475 PF00132 Bacterial transferase hexapeptide (six repeats) DW350_RS04480 PF02082 Transcriptional regulator DW350_RS04485 PF00266 Aminotransferase class-V DW350_RS04490 PF01592 NifU-like N terminal domain DW350_RS04495 PF01521 Iron-sulphur cluster biosynthesis DW350_RS04500 PF07743 HSCB C-terminal oligomerisation domain DW350_RS04505 PF00012 Hsp70 protein DW350_RS04510 PF00111 2Fe-2S iron-sulfur cluster binding domain DW350_RS04515 PF04384 Iron-sulphur cluster assembly DW350_RS04520 PF00334 Nucleoside diphosphate kinase DW350_RS04525 PF04055 Radical SAM superfamily DW350_RS04535 PF13464 Domain of unknown function (DUF4115) DW350_RS04540 PF04551 GcpE protein DW350_RS04545 PF13393 Histidyl-tRNA synthetase DW350_RS04545 PF03129 Anticodon binding domain DW350_RS04550 PF09976 Tetratricopeptide repeat-like domain DW350_RS04555 PF13360 PQQ-like domain DW350_RS04560 PF01926 50S ribosome-binding GTPase DW350_RS04560 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DW350_RS04570 PF00873 AcrB/AcrD/AcrF family DW350_RS04575 PF13533 Biotin-lipoyl like DW350_RS04585 PF04371 Porphyromonas-type peptidyl-arginine deiminase DW350_RS04590 PF00795 Carbon-nitrogen hydrolase DW350_RS04595 PF13742 OB-fold nucleic acid binding domain DW350_RS04595 PF02601 Exonuclease VII, large subunit DW350_RS04600 PF00571 CBS domain DW350_RS04600 PF00478 IMP dehydrogenase / GMP reductase domain DW350_RS04605 PF00958 GMP synthase C terminal domain DW350_RS04605 PF02540 NAD synthase DW350_RS04605 PF00117 Glutamine amidotransferase class-I DW350_RS04615 PF00107 Zinc-binding dehydrogenase DW350_RS04615 PF08240 Alcohol dehydrogenase GroES-like domain DW350_RS04620 PF07690 Major Facilitator Superfamily DW350_RS04630 PF13932 GidA associated domain DW350_RS04630 PF01134 Glucose inhibited division protein A DW350_RS04635 PF00440 Bacterial regulatory proteins, tetR family DW350_RS04640 PF12833 Helix-turn-helix domain DW350_RS04640 PF12852 Cupin DW350_RS04650 PF08240 Alcohol dehydrogenase GroES-like domain DW350_RS04650 PF00698 Acyl transferase domain DW350_RS04650 PF00107 Zinc-binding dehydrogenase DW350_RS04650 PF00109 Beta-ketoacyl synthase, N-terminal domain DW350_RS04650 PF02801 Beta-ketoacyl synthase, C-terminal domain DW350_RS04650 PF08659 KR domain DW350_RS04650 PF16197 Ketoacyl-synthetase C-terminal extension DW350_RS04650 PF14765 Polyketide synthase dehydratase DW350_RS04650 PF00550 Phosphopantetheine attachment site DW350_RS04655 PF00248 Aldo/keto reductase family DW350_RS04665 PF00440 Bacterial regulatory proteins, tetR family DW350_RS04670 PF01370 NAD dependent epimerase/dehydratase family DW350_RS04675 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DW350_RS04675 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DW350_RS04675 PF00378 Enoyl-CoA hydratase/isomerase DW350_RS04680 PF01638 HxlR-like helix-turn-helix DW350_RS04685 PF00106 short chain dehydrogenase DW350_RS04690 PF00440 Bacterial regulatory proteins, tetR family DW350_RS04690 PF08361 MAATS-type transcriptional repressor, C-terminal region DW350_RS04710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS04710 PF03466 LysR substrate binding domain DW350_RS04720 PF00106 short chain dehydrogenase DW350_RS04735 PF03466 LysR substrate binding domain DW350_RS04735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS04800 PF00561 alpha/beta hydrolase fold DW350_RS04805 PF03783 Curli production assembly/transport component CsgG DW350_RS04835 PF00107 Zinc-binding dehydrogenase DW350_RS04835 PF08240 Alcohol dehydrogenase GroES-like domain DW350_RS04840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS04840 PF03466 LysR substrate binding domain DW350_RS04860 PF07690 Major Facilitator Superfamily DW350_RS04865 PF07676 WD40-like Beta Propeller Repeat DW350_RS04865 PF04052 TolB amino-terminal domain DW350_RS04880 PF07690 Major Facilitator Superfamily DW350_RS04890 PF00675 Insulinase (Peptidase family M16) DW350_RS04890 PF05193 Peptidase M16 inactive domain DW350_RS04895 PF00248 Aldo/keto reductase family DW350_RS04900 PF00561 alpha/beta hydrolase fold DW350_RS04915 PF00696 Amino acid kinase family DW350_RS04915 PF00583 Acetyltransferase (GNAT) family DW350_RS04920 PF00512 His Kinase A (phospho-acceptor) domain DW350_RS04920 PF00672 HAMP domain DW350_RS04920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW350_RS04925 PF00072 Response regulator receiver domain DW350_RS04925 PF00486 Transcriptional regulatory protein, C terminal DW350_RS04930 PF01475 Ferric uptake regulator family DW350_RS04935 PF03551 Transcriptional regulator PadR-like family DW350_RS04945 PF13533 Biotin-lipoyl like DW350_RS04955 PF02321 Outer membrane efflux protein DW350_RS04990 PF01931 Protein of unknown function DUF84 DW350_RS05005 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DW350_RS05005 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DW350_RS05010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS05010 PF03466 LysR substrate binding domain DW350_RS05015 PF03788 LrgA family DW350_RS05020 PF04172 LrgB-like family DW350_RS05035 PF00158 Sigma-54 interaction domain DW350_RS05035 PF02954 Bacterial regulatory protein, Fis family DW350_RS05035 PF01590 GAF domain DW350_RS05040 PF08240 Alcohol dehydrogenase GroES-like domain DW350_RS05040 PF00107 Zinc-binding dehydrogenase DW350_RS05045 PF00171 Aldehyde dehydrogenase family DW350_RS05055 PF01979 Amidohydrolase family DW350_RS05060 PF01717 Cobalamin-independent synthase, Catalytic domain DW350_RS05070 PF01717 Cobalamin-independent synthase, Catalytic domain DW350_RS05085 PF07690 Major Facilitator Superfamily DW350_RS05095 PF07660 Secretin and TonB N terminus short domain DW350_RS05095 PF07715 TonB-dependent Receptor Plug Domain DW350_RS05095 PF00593 TonB dependent receptor DW350_RS05100 PF03466 LysR substrate binding domain DW350_RS05100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS05105 PF00248 Aldo/keto reductase family DW350_RS05110 PF00106 short chain dehydrogenase DW350_RS05115 PF00924 Mechanosensitive ion channel DW350_RS05115 PF05552 Conserved TM helix DW350_RS05120 PF14437 MafB19-like deaminase DW350_RS05125 PF01464 Transglycosylase SLT domain DW350_RS05125 PF00497 Bacterial extracellular solute-binding proteins, family 3 DW350_RS05130 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DW350_RS05130 PF02769 AIR synthase related protein, C-terminal domain DW350_RS05130 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal DW350_RS05150 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DW350_RS05175 PF03466 LysR substrate binding domain DW350_RS05175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS05225 PF03150 Di-haem cytochrome c peroxidase DW350_RS05230 PF01520 N-acetylmuramoyl-L-alanine amidase DW350_RS05240 PF02743 Cache domain DW350_RS05240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW350_RS05240 PF00672 HAMP domain DW350_RS05245 PF01042 Endoribonuclease L-PSP DW350_RS05250 PF00486 Transcriptional regulatory protein, C terminal DW350_RS05250 PF00072 Response regulator receiver domain DW350_RS05255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW350_RS05255 PF00512 His Kinase A (phospho-acceptor) domain DW350_RS05255 PF00672 HAMP domain DW350_RS05275 PF01263 Aldose 1-epimerase DW350_RS05285 PF00571 CBS domain DW350_RS05290 PF01566 Natural resistance-associated macrophage protein DW350_RS05295 PF04349 Periplasmic glucan biosynthesis protein, MdoG DW350_RS05305 PF14572 Phosphoribosyl synthetase-associated domain DW350_RS05305 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DW350_RS05310 PF08544 GHMP kinases C terminal DW350_RS05310 PF00288 GHMP kinases N terminal domain DW350_RS05315 PF03550 Outer membrane lipoprotein LolB DW350_RS05320 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DW350_RS05320 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DW350_RS05320 PF01488 Shikimate / quinate 5-dehydrogenase DW350_RS05325 PF00472 RF-1 domain DW350_RS05325 PF03462 PCRF domain DW350_RS05330 PF17827 PrmC N-terminal domain DW350_RS05330 PF05175 Methyltransferase small domain DW350_RS05335 PF13369 Transglutaminase-like superfamily DW350_RS05340 PF05684 Protein of unknown function (DUF819) DW350_RS05345 PF00793 DAHP synthetase I family DW350_RS05350 PF05870 Phenolic acid decarboxylase (PAD) DW350_RS05355 PF03466 LysR substrate binding domain DW350_RS05355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS05365 PF03466 LysR substrate binding domain DW350_RS05365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS05380 PF18125 RlmM ferredoxin-like domain DW350_RS05380 PF01728 FtsJ-like methyltransferase DW350_RS05405 PF03466 LysR substrate binding domain DW350_RS05405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS05410 PF00285 Citrate synthase, C-terminal domain DW350_RS05420 PF00583 Acetyltransferase (GNAT) family DW350_RS05460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS05460 PF03466 LysR substrate binding domain DW350_RS05470 PF04244 Deoxyribodipyrimidine photo-lyase-related protein DW350_RS05505 PF00202 Aminotransferase class-III DW350_RS05515 PF12833 Helix-turn-helix domain DW350_RS05515 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DW350_RS05520 PF13426 PAS domain DW350_RS05520 PF00563 EAL domain DW350_RS05520 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS05525 PF07532 Bacterial Ig-like domain (group 4) DW350_RS05535 PF07690 Major Facilitator Superfamily DW350_RS05565 PF02107 Flagellar L-ring protein DW350_RS05570 PF00672 HAMP domain DW350_RS05570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW350_RS05570 PF00512 His Kinase A (phospho-acceptor) domain DW350_RS05575 PF00072 Response regulator receiver domain DW350_RS05575 PF00486 Transcriptional regulatory protein, C terminal DW350_RS05580 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DW350_RS05585 PF00005 ABC transporter DW350_RS05585 PF02687 FtsX-like permease family DW350_RS05585 PF12704 MacB-like periplasmic core domain DW350_RS05590 PF02321 Outer membrane efflux protein DW350_RS05595 PF03942 DTW domain DW350_RS05600 PF18324 Hypothetical protein TT1725 DW350_RS05600 PF00180 Isocitrate/isopropylmalate dehydrogenase DW350_RS05605 PF00326 Prolyl oligopeptidase family DW350_RS05605 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region DW350_RS05610 PF00106 short chain dehydrogenase DW350_RS05615 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DW350_RS05615 PF01367 5'-3' exonuclease, C-terminal SAM fold DW350_RS05620 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases DW350_RS05620 PF11892 Domain of unknown function (DUF3412) DW350_RS05620 PF03641 Possible lysine decarboxylase DW350_RS05625 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS05640 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term DW350_RS05640 PF14489 QueF-like protein DW350_RS05645 PF07348 Syd protein (SUKH-2) DW350_RS05650 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) DW350_RS05675 PF04287 tRNA pseudouridine synthase C DW350_RS05680 PF00849 RNA pseudouridylate synthase DW350_RS05685 PF00258 Flavodoxin DW350_RS05690 PF02378 Phosphotransferase system, EIIC DW350_RS05690 PF00367 phosphotransferase system, EIIB DW350_RS05695 PF14602 Hexapeptide repeat of succinyl-transferase DW350_RS05695 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle DW350_RS05700 PF01909 Nucleotidyltransferase domain DW350_RS05700 PF01966 HD domain DW350_RS05700 PF08335 GlnD PII-uridylyltransferase DW350_RS05700 PF01842 ACT domain DW350_RS05705 PF00557 Metallopeptidase family M24 DW350_RS05710 PF00318 Ribosomal protein S2 DW350_RS05715 PF00889 Elongation factor TS DW350_RS05720 PF00696 Amino acid kinase family DW350_RS05725 PF01765 Ribosome recycling factor DW350_RS05730 PF01255 Putative undecaprenyl diphosphate synthase DW350_RS05740 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DW350_RS05740 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DW350_RS05740 PF13288 DXP reductoisomerase C-terminal domain DW350_RS05745 PF17820 PDZ domain DW350_RS05745 PF02163 Peptidase family M50 DW350_RS05750 PF07244 Surface antigen variable number repeat DW350_RS05750 PF01103 Surface antigen DW350_RS05755 PF01048 Phosphorylase superfamily DW350_RS05760 PF03938 Outer membrane protein (OmpH-like) DW350_RS05765 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DW350_RS05765 PF00132 Bacterial transferase hexapeptide (six repeats) DW350_RS05770 PF07977 FabA-like domain DW350_RS05775 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DW350_RS05775 PF00132 Bacterial transferase hexapeptide (six repeats) DW350_RS05780 PF02684 Lipid-A-disaccharide synthetase DW350_RS05785 PF01351 Ribonuclease HII DW350_RS05790 PF02811 PHP domain DW350_RS05790 PF01336 OB-fold nucleic acid binding domain DW350_RS05790 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DW350_RS05790 PF14579 Helix-hairpin-helix motif DW350_RS05790 PF07733 Bacterial DNA polymerase III alpha NTPase domain DW350_RS05795 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DW350_RS05800 PF01171 PP-loop family DW350_RS05800 PF11734 TilS substrate C-terminal domain DW350_RS05800 PF09179 TilS substrate binding domain DW350_RS05805 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS05820 PF03129 Anticodon binding domain DW350_RS05820 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DW350_RS05820 PF04073 Aminoacyl-tRNA editing domain DW350_RS05830 PF01980 tRNA-methyltransferase O DW350_RS05830 PF18389 TrmO C-terminal domain DW350_RS05845 PF01979 Amidohydrolase family DW350_RS05855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS05855 PF03466 LysR substrate binding domain DW350_RS05865 PF14310 Fibronectin type III-like domain DW350_RS05865 PF07691 PA14 domain DW350_RS05865 PF00933 Glycosyl hydrolase family 3 N terminal domain DW350_RS05865 PF01915 Glycosyl hydrolase family 3 C-terminal domain DW350_RS05875 PF07691 PA14 domain DW350_RS05875 PF14310 Fibronectin type III-like domain DW350_RS05875 PF00933 Glycosyl hydrolase family 3 N terminal domain DW350_RS05875 PF01915 Glycosyl hydrolase family 3 C-terminal domain DW350_RS05890 PF08003 Protein of unknown function (DUF1698) DW350_RS05895 PF13649 Methyltransferase domain DW350_RS05900 PF01904 Protein of unknown function DUF72 DW350_RS05905 PF02938 GAD domain DW350_RS05905 PF00152 tRNA synthetases class II (D, K and N) DW350_RS05905 PF01336 OB-fold nucleic acid binding domain DW350_RS05910 PF01709 Transcriptional regulator DW350_RS05915 PF02075 Crossover junction endodeoxyribonuclease RuvC DW350_RS05920 PF01330 RuvA N terminal domain DW350_RS05920 PF07499 RuvA, C-terminal domain DW350_RS05925 PF17864 RuvB AAA lid domain DW350_RS05925 PF05491 RuvB C-terminal winged helix domain DW350_RS05925 PF05496 Holliday junction DNA helicase RuvB P-loop domain DW350_RS05930 PF17243 POTRA domain TamA domain 1 DW350_RS05930 PF07244 Surface antigen variable number repeat DW350_RS05930 PF01103 Surface antigen DW350_RS05935 PF04357 TamB, inner membrane protein subunit of TAM complex DW350_RS05945 PF00326 Prolyl oligopeptidase family DW350_RS05945 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DW350_RS05950 PF03061 Thioesterase superfamily DW350_RS05955 PF01618 MotA/TolQ/ExbB proton channel family DW350_RS05960 PF02472 Biopolymer transport protein ExbD/TolR DW350_RS05970 PF07676 WD40-like Beta Propeller Repeat DW350_RS05970 PF04052 TolB amino-terminal domain DW350_RS05975 PF00691 OmpA family DW350_RS05980 PF13174 Tetratricopeptide repeat DW350_RS05980 PF16331 TolA binding protein trimerisation DW350_RS06005 PF02445 Quinolinate synthetase A protein DW350_RS06025 PF07992 Pyridine nucleotide-disulphide oxidoreductase DW350_RS06030 PF00085 Thioredoxin DW350_RS06035 PF07690 Major Facilitator Superfamily DW350_RS06040 PF00440 Bacterial regulatory proteins, tetR family DW350_RS06050 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DW350_RS06050 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DW350_RS06055 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DW350_RS06060 PF02233 NAD(P) transhydrogenase beta subunit DW350_RS06065 PF00171 Aldehyde dehydrogenase family DW350_RS06075 PF08240 Alcohol dehydrogenase GroES-like domain DW350_RS06085 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase DW350_RS06090 PF01810 LysE type translocator DW350_RS06100 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DW350_RS06100 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DW350_RS06110 PF00266 Aminotransferase class-V DW350_RS06115 PF00563 EAL domain DW350_RS06115 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS06115 PF03707 Bacterial signalling protein N terminal repeat DW350_RS06120 PF00849 RNA pseudouridylate synthase DW350_RS06135 PF03301 Tryptophan 2,3-dioxygenase DW350_RS06140 PF00850 Histone deacetylase domain DW350_RS06145 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) DW350_RS06155 PF13307 Helicase C-terminal domain DW350_RS06155 PF06733 DEAD_2 DW350_RS06160 PF00593 TonB dependent receptor DW350_RS06160 PF07715 TonB-dependent Receptor Plug Domain DW350_RS06170 PF01618 MotA/TolQ/ExbB proton channel family DW350_RS06175 PF01618 MotA/TolQ/ExbB proton channel family DW350_RS06180 PF02472 Biopolymer transport protein ExbD/TolR DW350_RS06195 PF00593 TonB dependent receptor DW350_RS06195 PF07715 TonB-dependent Receptor Plug Domain DW350_RS06200 PF00593 TonB dependent receptor DW350_RS06200 PF07715 TonB-dependent Receptor Plug Domain DW350_RS06205 PF07715 TonB-dependent Receptor Plug Domain DW350_RS06205 PF00593 TonB dependent receptor DW350_RS06210 PF00593 TonB dependent receptor DW350_RS06210 PF07715 TonB-dependent Receptor Plug Domain DW350_RS06215 PF00593 TonB dependent receptor DW350_RS06215 PF07715 TonB-dependent Receptor Plug Domain DW350_RS06220 PF00800 Prephenate dehydratase DW350_RS06220 PF01817 Chorismate mutase type II DW350_RS06230 PF01207 Dihydrouridine synthase (Dus) DW350_RS06240 PF05114 Protein of unknown function (DUF692) DW350_RS06250 PF04304 Protein of unknown function (DUF454) DW350_RS06255 PF00156 Phosphoribosyl transferase domain DW350_RS06260 PF12169 DNA polymerase III subunits gamma and tau domain III DW350_RS06260 PF12170 DNA polymerase III tau subunit V interacting with alpha DW350_RS06260 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding DW350_RS06265 PF02575 YbaB/EbfC DNA-binding family DW350_RS06270 PF13662 Toprim domain DW350_RS06270 PF02132 RecR protein DW350_RS06275 PF00183 Hsp90 protein DW350_RS06275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW350_RS06280 PF05191 Adenylate kinase, active site lid DW350_RS06285 PF00762 Ferrochelatase DW350_RS06290 PF00294 pfkB family carbohydrate kinase DW350_RS06305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW350_RS06310 PF00072 Response regulator receiver domain DW350_RS06310 PF00486 Transcriptional regulatory protein, C terminal DW350_RS06315 PF12697 Alpha/beta hydrolase family DW350_RS06325 PF04185 Phosphoesterase family DW350_RS06330 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DW350_RS06330 PF01502 Phosphoribosyl-AMP cyclohydrolase DW350_RS06335 PF00977 Histidine biosynthesis protein DW350_RS06340 PF00977 Histidine biosynthesis protein DW350_RS06345 PF00117 Glutamine amidotransferase class-I DW350_RS06350 PF08645 Polynucleotide kinase 3 phosphatase DW350_RS06350 PF00475 Imidazoleglycerol-phosphate dehydratase DW350_RS06355 PF00155 Aminotransferase class I and II DW350_RS06360 PF00815 Histidinol dehydrogenase DW350_RS06365 PF01634 ATP phosphoribosyltransferase DW350_RS06365 PF08029 HisG, C-terminal domain DW350_RS06375 PF13307 Helicase C-terminal domain DW350_RS06375 PF04851 Type III restriction enzyme, res subunit DW350_RS06380 PF00814 Glycoprotease family DW350_RS06395 PF03843 Outer membrane lipoprotein Slp family DW350_RS06405 PF00501 AMP-binding enzyme DW350_RS06405 PF13193 AMP-binding enzyme C-terminal domain DW350_RS06410 PF00570 HRDC domain DW350_RS06410 PF01612 3'-5' exonuclease DW350_RS06415 PF03776 Septum formation topological specificity factor MinE DW350_RS06420 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DW350_RS06425 PF03775 Septum formation inhibitor MinC, C-terminal domain DW350_RS06425 PF05209 Septum formation inhibitor MinC, N-terminal domain DW350_RS06430 PF05166 YcgL domain DW350_RS06435 PF13406 Transglycosylase SLT domain DW350_RS06440 PF03692 Putative zinc- or iron-chelating domain DW350_RS06445 PF02600 Disulfide bond formation protein DsbB DW350_RS06450 PF06450 Bacterial Na+/H+ antiporter B (NhaB) DW350_RS06455 PF00392 Bacterial regulatory proteins, gntR family DW350_RS06455 PF07840 FadR C-terminal domain DW350_RS06460 PF04293 SpoVR like protein DW350_RS06465 PF04285 Protein of unknown function (DUF444) DW350_RS06470 PF08298 PrkA AAA domain DW350_RS06470 PF06798 PrkA serine protein kinase C-terminal domain DW350_RS06480 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DW350_RS06480 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DW350_RS06485 PF00462 Glutaredoxin DW350_RS06490 PF13726 Na+-H+ antiporter family DW350_RS06490 PF03553 Na+/H+ antiporter family DW350_RS06495 PF13533 Biotin-lipoyl like DW350_RS06500 PF00005 ABC transporter DW350_RS06510 PF05145 Transition state regulatory protein AbrB DW350_RS06525 PF18030 RimK PreATP-grasp domain DW350_RS06525 PF08443 RimK-like ATP-grasp domain DW350_RS06530 PF03641 Possible lysine decarboxylase DW350_RS06535 PF00696 Amino acid kinase family DW350_RS06535 PF01842 ACT domain DW350_RS06540 PF00929 Exonuclease DW350_RS06545 PF18393 MotY N-terminal domain DW350_RS06545 PF00691 OmpA family DW350_RS06550 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DW350_RS06555 PF10576 Iron-sulfur binding domain of endonuclease III DW350_RS06555 PF00633 Helix-hairpin-helix motif DW350_RS06555 PF00730 HhH-GPD superfamily base excision DNA repair protein DW350_RS06560 PF02508 Rnf-Nqr subunit, membrane protein DW350_RS06565 PF04205 FMN-binding domain DW350_RS06570 PF03116 NQR2, RnfD, RnfE family DW350_RS06575 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DW350_RS06575 PF13375 RnfC Barrel sandwich hybrid domain DW350_RS06575 PF12838 4Fe-4S dicluster domain DW350_RS06575 PF10531 SLBB domain DW350_RS06580 PF04060 Putative Fe-S cluster DW350_RS06585 PF02508 Rnf-Nqr subunit, membrane protein DW350_RS06595 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS06595 PF00563 EAL domain DW350_RS06595 PF01590 GAF domain DW350_RS06595 PF00989 PAS fold DW350_RS06620 PF00271 Helicase conserved C-terminal domain DW350_RS06620 PF04851 Type III restriction enzyme, res subunit DW350_RS06620 PF02151 UvrB/uvrC motif DW350_RS06620 PF12344 Ultra-violet resistance protein B DW350_RS06620 PF17757 UvrB interaction domain DW350_RS06640 PF07670 Nucleoside recognition DW350_RS06640 PF07664 Ferrous iron transport protein B C terminus DW350_RS06640 PF02421 Ferrous iron transport protein B DW350_RS06655 PF00561 alpha/beta hydrolase fold DW350_RS06675 PF01242 6-pyruvoyl tetrahydropterin synthase DW350_RS06680 PF06508 Queuosine biosynthesis protein QueC DW350_RS06685 PF04055 Radical SAM superfamily DW350_RS06690 PF01544 CorA-like Mg2+ transporter protein DW350_RS06695 PF00144 Beta-lactamase DW350_RS06700 PF13302 Acetyltransferase (GNAT) domain DW350_RS06705 PF00291 Pyridoxal-phosphate dependent enzyme DW350_RS06715 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DW350_RS06715 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DW350_RS06720 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DW350_RS06720 PF00529 HlyD membrane-fusion protein of T1SS DW350_RS06730 PF13302 Acetyltransferase (GNAT) domain DW350_RS06740 PF06470 SMC proteins Flexible Hinge Domain DW350_RS06740 PF02463 RecF/RecN/SMC N terminal domain DW350_RS06745 PF04354 ZipA, C-terminal FtsZ-binding domain DW350_RS06750 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DW350_RS06750 PF01653 NAD-dependent DNA ligase adenylation domain DW350_RS06750 PF12826 Helix-hairpin-helix motif DW350_RS06750 PF03120 NAD-dependent DNA ligase OB-fold domain DW350_RS06750 PF00533 BRCA1 C Terminus (BRCT) domain DW350_RS06765 PF03222 Tryptophan/tyrosine permease family DW350_RS06785 PF00392 Bacterial regulatory proteins, gntR family DW350_RS06815 PF08719 Domain of unknown function (DUF1768) DW350_RS06855 PF13520 Amino acid permease DW350_RS06860 PF01645 Conserved region in glutamate synthase DW350_RS06865 PF01011 PQQ enzyme repeat DW350_RS06870 PF04199 Putative cyclase DW350_RS06880 PF16499 Alpha galactosidase A DW350_RS06880 PF17801 Alpha galactosidase C-terminal beta sandwich domain DW350_RS06910 PF00749 tRNA synthetases class I (E and Q), catalytic domain DW350_RS06950 PF13472 GDSL-like Lipase/Acylhydrolase family DW350_RS06955 PF01470 Pyroglutamyl peptidase DW350_RS06970 PF03746 LamB/YcsF family DW350_RS06975 PF02626 Carboxyltransferase domain, subdomain A and B DW350_RS06980 PF02682 Carboxyltransferase domain, subdomain C and D DW350_RS06985 PF00005 ABC transporter DW350_RS06995 PF04820 Tryptophan halogenase DW350_RS07010 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DW350_RS07015 PF00873 AcrB/AcrD/AcrF family DW350_RS07020 PF02583 Metal-sensitive transcriptional repressor DW350_RS07050 PF00072 Response regulator receiver domain DW350_RS07050 PF00196 Bacterial regulatory proteins, luxR family DW350_RS07055 PF00313 'Cold-shock' DNA-binding domain DW350_RS07070 PF01757 Acyltransferase family DW350_RS07090 PF01370 NAD dependent epimerase/dehydratase family DW350_RS07090 PF08338 Domain of unknown function (DUF1731) DW350_RS07095 PF01594 AI-2E family transporter DW350_RS07110 PF01464 Transglycosylase SLT domain DW350_RS07110 PF01476 LysM domain DW350_RS07115 PF00753 Metallo-beta-lactamase superfamily DW350_RS07115 PF16123 Hydroxyacylglutathione hydrolase C-terminus DW350_RS07120 PF08241 Methyltransferase domain DW350_RS07130 PF00075 RNase H DW350_RS07135 PF00929 Exonuclease DW350_RS07170 PF00873 AcrB/AcrD/AcrF family DW350_RS07175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DW350_RS07175 PF00529 HlyD membrane-fusion protein of T1SS DW350_RS07185 PF00127 Copper binding proteins, plastocyanin/azurin family DW350_RS07190 PF09317 Domain of unknown function (DUF1974) DW350_RS07190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DW350_RS07190 PF02770 Acyl-CoA dehydrogenase, middle domain DW350_RS07190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DW350_RS07195 PF13580 SIS domain DW350_RS07205 PF13230 Glutamine amidotransferases class-II DW350_RS07215 PF00551 Formyl transferase DW350_RS07220 PF00586 AIR synthase related protein, N-terminal domain DW350_RS07220 PF02769 AIR synthase related protein, C-terminal domain DW350_RS07235 PF00308 Bacterial dnaA protein DW350_RS07240 PF03358 NADPH-dependent FMN reductase DW350_RS07245 PF03960 ArsC family DW350_RS07250 PF01435 Peptidase family M48 DW350_RS07255 PF01594 AI-2E family transporter DW350_RS07260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW350_RS07260 PF08447 PAS fold DW350_RS07260 PF13426 PAS domain DW350_RS07270 PF01212 Beta-eliminating lyase DW350_RS07275 PF00005 ABC transporter DW350_RS07275 PF00664 ABC transporter transmembrane region DW350_RS07285 PF00578 AhpC/TSA family DW350_RS07290 PF01842 ACT domain DW350_RS07295 PF00701 Dihydrodipicolinate synthetase family DW350_RS07300 PF06804 NlpB/DapX lipoprotein DW350_RS07305 PF01259 SAICAR synthetase DW350_RS07330 PF13593 SBF-like CPA transporter family (DUF4137) DW350_RS07335 PF03466 LysR substrate binding domain DW350_RS07335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS07340 PF00583 Acetyltransferase (GNAT) family DW350_RS07350 PF00107 Zinc-binding dehydrogenase DW350_RS07350 PF08240 Alcohol dehydrogenase GroES-like domain DW350_RS07355 PF12833 Helix-turn-helix domain DW350_RS07355 PF06719 AraC-type transcriptional regulator N-terminus DW350_RS07365 PF07687 Peptidase dimerisation domain DW350_RS07365 PF01546 Peptidase family M20/M25/M40 DW350_RS07370 PF03960 ArsC family DW350_RS07375 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DW350_RS07380 PF05524 PEP-utilising enzyme, N-terminal DW350_RS07380 PF00391 PEP-utilising enzyme, mobile domain DW350_RS07380 PF02896 PEP-utilising enzyme, TIM barrel domain DW350_RS07385 PF00381 PTS HPr component phosphorylation site DW350_RS07390 PF00593 TonB dependent receptor DW350_RS07390 PF07715 TonB-dependent Receptor Plug Domain DW350_RS07395 PF07715 TonB-dependent Receptor Plug Domain DW350_RS07395 PF00593 TonB dependent receptor DW350_RS07400 PF01593 Flavin containing amine oxidoreductase DW350_RS07415 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) DW350_RS07425 PF04542 Sigma-70 region 2 DW350_RS07425 PF08281 Sigma-70, region 4 DW350_RS07435 PF07584 Aerotolerance regulator N-terminal DW350_RS07435 PF13519 von Willebrand factor type A domain DW350_RS07450 PF01882 Protein of unknown function DUF58 DW350_RS07455 PF17863 AAA lid domain DW350_RS07455 PF07726 ATPase family associated with various cellular activities (AAA) DW350_RS07460 PF02803 Thiolase, C-terminal domain DW350_RS07460 PF00108 Thiolase, N-terminal domain DW350_RS07465 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DW350_RS07465 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DW350_RS07465 PF00378 Enoyl-CoA hydratase/isomerase DW350_RS07475 PF03707 Bacterial signalling protein N terminal repeat DW350_RS07475 PF00563 EAL domain DW350_RS07475 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS07480 PF16187 Middle or third domain of peptidase_M16 DW350_RS07480 PF05193 Peptidase M16 inactive domain DW350_RS07480 PF00675 Insulinase (Peptidase family M16) DW350_RS07485 PF00300 Histidine phosphatase superfamily (branch 1) DW350_RS07490 PF01713 Smr domain DW350_RS07495 PF05175 Methyltransferase small domain DW350_RS07500 PF01264 Chorismate synthase DW350_RS07505 PF04315 Elongation factor P hydroxylase DW350_RS07515 PF08891 YfcL protein DW350_RS07520 PF01266 FAD dependent oxidoreductase DW350_RS07520 PF05430 S-adenosyl-L-methionine-dependent methyltransferase DW350_RS07525 PF02801 Beta-ketoacyl synthase, C-terminal domain DW350_RS07525 PF00109 Beta-ketoacyl synthase, N-terminal domain DW350_RS07530 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DW350_RS07530 PF11890 Domain of unknown function (DUF3410) DW350_RS07530 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DW350_RS07535 PF02774 Semialdehyde dehydrogenase, dimerisation domain DW350_RS07535 PF01118 Semialdehyde dehydrogenase, NAD binding domain DW350_RS07545 PF01416 tRNA pseudouridine synthase DW350_RS07550 PF01039 Carboxyl transferase domain DW350_RS07550 PF17848 Acetyl-coA carboxylase zinc finger domain DW350_RS07555 PF08245 Mur ligase middle domain DW350_RS07555 PF02875 Mur ligase family, glutamate ligase domain DW350_RS07560 PF05036 Sporulation related domain DW350_RS07565 PF02674 Colicin V production protein DW350_RS07570 PF00156 Phosphoribosyl transferase domain DW350_RS07585 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) DW350_RS07590 PF00149 Calcineurin-like phosphoesterase DW350_RS07595 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DW350_RS07600 PF01406 tRNA synthetases class I (C) catalytic domain DW350_RS07600 PF09190 DALR domain DW350_RS07610 PF00520 Ion transport protein DW350_RS07610 PF00027 Cyclic nucleotide-binding domain DW350_RS07615 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DW350_RS07615 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DW350_RS07635 PF05697 Bacterial trigger factor protein (TF) DW350_RS07635 PF05698 Bacterial trigger factor protein (TF) C-terminus DW350_RS07635 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DW350_RS07640 PF00574 Clp protease DW350_RS07645 PF06689 ClpX C4-type zinc finger DW350_RS07645 PF07724 AAA domain (Cdc48 subfamily) DW350_RS07645 PF10431 C-terminal, D2-small domain, of ClpB protein DW350_RS07650 PF05362 Lon protease (S16) C-terminal proteolytic domain DW350_RS07650 PF00004 ATPase family associated with various cellular activities (AAA) DW350_RS07650 PF02190 ATP-dependent protease La (LON) substrate-binding domain DW350_RS07655 PF00216 Bacterial DNA-binding protein DW350_RS07665 PF13145 PPIC-type PPIASE domain DW350_RS07675 PF00155 Aminotransferase class I and II DW350_RS07680 PF00596 Class II Aldolase and Adducin N-terminal domain DW350_RS07690 PF03079 ARD/ARD' family DW350_RS07710 PF01008 Initiation factor 2 subunit family DW350_RS07715 PF01636 Phosphotransferase enzyme family DW350_RS07720 PF00005 ABC transporter DW350_RS07725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DW350_RS07725 PF00005 ABC transporter DW350_RS07730 PF12911 N-terminal TM domain of oligopeptide transport permease C DW350_RS07730 PF00528 Binding-protein-dependent transport system inner membrane component DW350_RS07735 PF00528 Binding-protein-dependent transport system inner membrane component DW350_RS07740 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DW350_RS07745 PF00158 Sigma-54 interaction domain DW350_RS07745 PF02954 Bacterial regulatory protein, Fis family DW350_RS07750 PF04012 PspA/IM30 family DW350_RS07765 PF04317 YcjX-like family, DUF463 DW350_RS07770 PF05128 Domain of unknown function (DUF697) DW350_RS07775 PF00351 Biopterin-dependent aromatic amino acid hydroxylase DW350_RS07780 PF01329 Pterin 4 alpha carbinolamine dehydratase DW350_RS07785 PF00158 Sigma-54 interaction domain DW350_RS07785 PF18024 Helix-turn-helix domain DW350_RS07800 PF12833 Helix-turn-helix domain DW350_RS07800 PF01965 DJ-1/PfpI family DW350_RS07805 PF00196 Bacterial regulatory proteins, luxR family DW350_RS07810 PF00857 Isochorismatase family DW350_RS07840 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DW350_RS07845 PF04209 homogentisate 1,2-dioxygenase DW350_RS07855 PF02798 Glutathione S-transferase, N-terminal domain DW350_RS07855 PF14497 Glutathione S-transferase, C-terminal domain DW350_RS07860 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DW350_RS07860 PF00072 Response regulator receiver domain DW350_RS07860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW350_RS07860 PF00512 His Kinase A (phospho-acceptor) domain DW350_RS07860 PF00672 HAMP domain DW350_RS07860 PF01627 Hpt domain DW350_RS07865 PF00072 Response regulator receiver domain DW350_RS07870 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DW350_RS07880 PF03466 LysR substrate binding domain DW350_RS07880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS07885 PF00849 RNA pseudouridylate synthase DW350_RS07890 PF06224 Winged helix DNA-binding domain DW350_RS07920 PF04893 Yip1 domain DW350_RS07925 PF01979 Amidohydrolase family DW350_RS07930 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DW350_RS07930 PF00749 tRNA synthetases class I (E and Q), catalytic domain DW350_RS07935 PF00881 Nitroreductase family DW350_RS07940 PF07690 Major Facilitator Superfamily DW350_RS07965 PF03737 Aldolase/RraA DW350_RS07970 PF14743 DNA ligase OB-like domain DW350_RS07970 PF01068 ATP dependent DNA ligase domain DW350_RS07975 PF00313 'Cold-shock' DNA-binding domain DW350_RS07990 PF03466 LysR substrate binding domain DW350_RS07990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS07995 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DW350_RS07995 PF00529 HlyD membrane-fusion protein of T1SS DW350_RS08000 PF00873 AcrB/AcrD/AcrF family DW350_RS08005 PF07683 Cobalamin synthesis protein cobW C-terminal domain DW350_RS08005 PF02492 CobW/HypB/UreG, nucleotide-binding domain DW350_RS08010 PF04269 Protein of unknown function, DUF440 DW350_RS08015 PF01475 Ferric uptake regulator family DW350_RS08020 PF08447 PAS fold DW350_RS08020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW350_RS08040 PF08447 PAS fold DW350_RS08040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW350_RS08045 PF04954 Siderophore-interacting protein DW350_RS08045 PF08021 Siderophore-interacting FAD-binding domain DW350_RS08055 PF07690 Major Facilitator Superfamily DW350_RS08060 PF07690 Major Facilitator Superfamily DW350_RS08065 PF07690 Major Facilitator Superfamily DW350_RS08070 PF04073 Aminoacyl-tRNA editing domain DW350_RS08075 PF01432 Peptidase family M3 DW350_RS08080 PF00291 Pyridoxal-phosphate dependent enzyme DW350_RS08085 PF01432 Peptidase family M3 DW350_RS08095 PF01584 CheW-like domain DW350_RS08095 PF00072 Response regulator receiver domain DW350_RS08110 PF00282 Pyridoxal-dependent decarboxylase conserved domain DW350_RS08115 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) DW350_RS08125 PF06276 Ferric iron reductase FhuF-like transporter DW350_RS08125 PF04183 IucA / IucC family DW350_RS08130 PF04444 Catechol dioxygenase N terminus DW350_RS08130 PF00775 Dioxygenase DW350_RS08135 PF02426 Muconolactone delta-isomerase DW350_RS08140 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DW350_RS08140 PF13378 Enolase C-terminal domain-like DW350_RS08145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS08145 PF03466 LysR substrate binding domain DW350_RS08150 PF00561 alpha/beta hydrolase fold DW350_RS08170 PF01554 MatE DW350_RS08175 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family DW350_RS08180 PF00226 DnaJ domain DW350_RS08180 PF05099 Tellurite resistance protein TerB DW350_RS08185 PF00677 Lumazine binding domain DW350_RS08195 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DW350_RS08195 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DW350_RS08200 PF00924 Mechanosensitive ion channel DW350_RS08205 PF00478 IMP dehydrogenase / GMP reductase domain DW350_RS08205 PF00571 CBS domain DW350_RS08215 PF01070 FMN-dependent dehydrogenase DW350_RS08225 PF01177 Asp/Glu/Hydantoin racemase DW350_RS08240 PF02424 ApbE family DW350_RS08265 PF01906 Putative heavy-metal-binding DW350_RS08275 PF09962 Uncharacterized conserved protein (DUF2196) DW350_RS08290 PF13333 Integrase core domain DW350_RS08290 PF13276 HTH-like domain DW350_RS08290 PF00665 Integrase core domain DW350_RS08295 PF12008 Type I restriction and modification enzyme - subunit R C terminal DW350_RS08295 PF18766 SWI2/SNF2 ATPase DW350_RS08295 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DW350_RS08300 PF01420 Type I restriction modification DNA specificity domain DW350_RS08310 PF02384 N-6 DNA Methylase DW350_RS08310 PF12161 HsdM N-terminal domain DW350_RS08320 PF13737 Transposase DDE domain DW350_RS08325 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) DW350_RS08330 PF00575 S1 RNA binding domain DW350_RS08330 PF00773 RNB domain DW350_RS08330 PF08206 Ribonuclease B OB domain DW350_RS08330 PF17876 Cold shock domain DW350_RS08335 PF12833 Helix-turn-helix domain DW350_RS08335 PF12852 Cupin DW350_RS08350 PF00583 Acetyltransferase (GNAT) family DW350_RS08350 PF00795 Carbon-nitrogen hydrolase DW350_RS08360 PF07690 Major Facilitator Superfamily DW350_RS08375 PF01297 Zinc-uptake complex component A periplasmic DW350_RS08380 PF00950 ABC 3 transport family DW350_RS08385 PF00005 ABC transporter DW350_RS08395 PF03707 Bacterial signalling protein N terminal repeat DW350_RS08395 PF00563 EAL domain DW350_RS08395 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS08400 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DW350_RS08400 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DW350_RS08405 PF01641 SelR domain DW350_RS08415 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DW350_RS08415 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DW350_RS08420 PF18027 Cytosolic carboxypeptidase N-terminal domain DW350_RS08420 PF00246 Zinc carboxypeptidase DW350_RS08425 PF01235 Sodium:alanine symporter family DW350_RS08435 PF07023 Protein of unknown function (DUF1315) DW350_RS08445 PF01472 PUA domain DW350_RS08445 PF00696 Amino acid kinase family DW350_RS08450 PF00171 Aldehyde dehydrogenase family DW350_RS08455 PF03006 Haemolysin-III related DW350_RS08465 PF00155 Aminotransferase class I and II DW350_RS08470 PF17763 Glutaminase/Asparaginase C-terminal domain DW350_RS08470 PF00710 Asparaginase, N-terminal DW350_RS08475 PF01343 Peptidase family S49 DW350_RS08480 PF07992 Pyridine nucleotide-disulphide oxidoreductase DW350_RS08480 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DW350_RS08485 PF01475 Ferric uptake regulator family DW350_RS08495 PF00258 Flavodoxin DW350_RS08500 PF01402 Ribbon-helix-helix protein, copG family DW350_RS08505 PF12697 Alpha/beta hydrolase family DW350_RS08510 PF03925 SeqA protein C-terminal domain DW350_RS08510 PF17206 SeqA protein N-terminal domain DW350_RS08515 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DW350_RS08515 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DW350_RS08515 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DW350_RS08515 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DW350_RS08520 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family DW350_RS08525 PF00676 Dehydrogenase E1 component DW350_RS08530 PF02779 Transketolase, pyrimidine binding domain DW350_RS08530 PF02780 Transketolase, C-terminal domain DW350_RS08535 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DW350_RS08535 PF00364 Biotin-requiring enzyme DW350_RS08535 PF02817 e3 binding domain DW350_RS08540 PF03466 LysR substrate binding domain DW350_RS08540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS08575 PF10127 RNA repair pathway DNA polymerase beta family DW350_RS08630 PF00005 ABC transporter DW350_RS08635 PF07702 UTRA domain DW350_RS08635 PF00392 Bacterial regulatory proteins, gntR family DW350_RS08640 PF00939 Sodium:sulfate symporter transmembrane region DW350_RS08655 PF03618 Kinase/pyrophosphorylase DW350_RS08660 PF00391 PEP-utilising enzyme, mobile domain DW350_RS08660 PF02896 PEP-utilising enzyme, TIM barrel domain DW350_RS08660 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DW350_RS08665 PF01223 DNA/RNA non-specific endonuclease DW350_RS08680 PF02254 TrkA-N domain DW350_RS08680 PF00999 Sodium/hydrogen exchanger family DW350_RS08685 PF02913 FAD linked oxidases, C-terminal domain DW350_RS08685 PF01565 FAD binding domain DW350_RS08685 PF13183 4Fe-4S dicluster domain DW350_RS08695 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DW350_RS08695 PF00205 Thiamine pyrophosphate enzyme, central domain DW350_RS08695 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DW350_RS08705 PF01063 Amino-transferase class IV DW350_RS08710 PF00920 Dehydratase family DW350_RS08715 PF00291 Pyridoxal-phosphate dependent enzyme DW350_RS08715 PF00585 C-terminal regulatory domain of Threonine dehydratase DW350_RS08720 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DW350_RS08720 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DW350_RS08725 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DW350_RS08725 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DW350_RS08735 PF08007 Cupin superfamily protein DW350_RS08740 PF08328 Adenylosuccinate lyase C-terminal DW350_RS08740 PF00206 Lyase DW350_RS08745 PF04356 Protein of unknown function (DUF489) DW350_RS08760 PF00849 RNA pseudouridylate synthase DW350_RS08765 PF03971 Monomeric isocitrate dehydrogenase DW350_RS08770 PF00313 'Cold-shock' DNA-binding domain DW350_RS08775 PF02617 ATP-dependent Clp protease adaptor protein ClpS DW350_RS08780 PF17871 AAA lid domain DW350_RS08780 PF10431 C-terminal, D2-small domain, of ClpB protein DW350_RS08780 PF07724 AAA domain (Cdc48 subfamily) DW350_RS08780 PF02861 Clp amino terminal domain, pathogenicity island component DW350_RS08780 PF00004 ATPase family associated with various cellular activities (AAA) DW350_RS08785 PF01176 Translation initiation factor 1A / IF-1 DW350_RS08790 PF04377 Arginine-tRNA-protein transferase, C terminus DW350_RS08790 PF04376 Arginine-tRNA-protein transferase, N terminus DW350_RS08795 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DW350_RS08800 PF07992 Pyridine nucleotide-disulphide oxidoreductase DW350_RS08805 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DW350_RS08805 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DW350_RS08810 PF01037 Lrp/AsnC ligand binding domain DW350_RS08815 PF01580 FtsK/SpoIIIE family DW350_RS08815 PF09397 Ftsk gamma domain DW350_RS08815 PF17854 FtsK alpha domain DW350_RS08815 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DW350_RS08820 PF03548 Outer membrane lipoprotein carrier protein LolA DW350_RS08825 PF00004 ATPase family associated with various cellular activities (AAA) DW350_RS08825 PF16193 AAA C-terminal domain DW350_RS08825 PF12002 MgsA AAA+ ATPase C terminal DW350_RS08830 PF02403 Seryl-tRNA synthetase N-terminal domain DW350_RS08830 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DW350_RS08840 PF01541 GIY-YIG catalytic domain DW350_RS08850 PF01527 Transposase DW350_RS08855 PF13276 HTH-like domain DW350_RS08855 PF13333 Integrase core domain DW350_RS08855 PF00665 Integrase core domain DW350_RS08860 PF00665 Integrase core domain DW350_RS08860 PF13333 Integrase core domain DW350_RS08860 PF13276 HTH-like domain DW350_RS08895 PF00270 DEAD/DEAH box helicase DW350_RS08895 PF00271 Helicase conserved C-terminal domain DW350_RS08920 PF01975 Survival protein SurE DW350_RS08925 PF00465 Iron-containing alcohol dehydrogenase DW350_RS08930 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS08930 PF17151 Periplasmic sensor domain DW350_RS08935 PF00313 'Cold-shock' DNA-binding domain DW350_RS08950 PF00593 TonB dependent receptor DW350_RS08950 PF07715 TonB-dependent Receptor Plug Domain DW350_RS08960 PF08281 Sigma-70, region 4 DW350_RS08960 PF04542 Sigma-70 region 2 DW350_RS08965 PF04358 DsrC like protein DW350_RS08975 PF02635 DsrE/DsrF-like family DW350_RS08980 PF02635 DsrE/DsrF-like family DW350_RS08985 PF01027 Inhibitor of apoptosis-promoting Bax1 DW350_RS08995 PF01062 Bestrophin, RFP-TM, chloride channel DW350_RS09000 PF00899 ThiF family DW350_RS09005 PF00994 Probable molybdopterin binding domain DW350_RS09010 PF00384 Molybdopterin oxidoreductase DW350_RS09015 PF02634 FdhD/NarQ family DW350_RS09020 PF02391 MoaE protein DW350_RS09025 PF02597 ThiS family DW350_RS09030 PF01967 MoaC family DW350_RS09035 PF00994 Probable molybdopterin binding domain DW350_RS09040 PF12804 MobA-like NTP transferase domain DW350_RS09045 PF04055 Radical SAM superfamily DW350_RS09045 PF06463 Molybdenum Cofactor Synthesis C DW350_RS09050 PF03466 LysR substrate binding domain DW350_RS09050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS09055 PF00994 Probable molybdopterin binding domain DW350_RS09055 PF03453 MoeA N-terminal region (domain I and II) DW350_RS09055 PF03454 MoeA C-terminal region (domain IV) DW350_RS09065 PF00528 Binding-protein-dependent transport system inner membrane component DW350_RS09070 PF00005 ABC transporter DW350_RS09070 PF03459 TOBE domain DW350_RS09075 PF00072 Response regulator receiver domain DW350_RS09075 PF00196 Bacterial regulatory proteins, luxR family DW350_RS09080 PF01541 GIY-YIG catalytic domain DW350_RS09080 PF02151 UvrB/uvrC motif DW350_RS09080 PF08459 UvrC Helix-hairpin-helix N-terminal DW350_RS09085 PF01066 CDP-alcohol phosphatidyltransferase DW350_RS09115 PF02659 Putative manganese efflux pump DW350_RS09120 PF01022 Bacterial regulatory protein, arsR family DW350_RS09130 PF03358 NADPH-dependent FMN reductase DW350_RS09135 PF01758 Sodium Bile acid symporter family DW350_RS09140 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DW350_RS09140 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DW350_RS09145 PF03061 Thioesterase superfamily DW350_RS09155 PF03992 Antibiotic biosynthesis monooxygenase DW350_RS09160 PF01588 Putative tRNA binding domain DW350_RS09160 PF09334 tRNA synthetases class I (M) DW350_RS09165 PF10609 NUBPL iron-transfer P-loop NTPase DW350_RS09170 PF00485 Phosphoribulokinase / Uridine kinase family DW350_RS09175 PF00692 dUTPase DW350_RS09180 PF00472 RF-1 domain DW350_RS09195 PF00085 Thioredoxin DW350_RS09200 PF10459 Peptidase S46 DW350_RS09230 PF00884 Sulfatase DW350_RS09230 PF11893 Domain of unknown function (DUF3413) DW350_RS09235 PF07208 Protein of unknown function (DUF1414) DW350_RS09240 PF04245 37-kD nucleoid-associated bacterial protein DW350_RS09250 PF01435 Peptidase family M48 DW350_RS09255 PF04011 LemA family DW350_RS09260 PF00152 tRNA synthetases class II (D, K and N) DW350_RS09260 PF01336 OB-fold nucleic acid binding domain DW350_RS09285 PF00202 Aminotransferase class-III DW350_RS09290 PF06968 Biotin and Thiamin Synthesis associated domain DW350_RS09290 PF04055 Radical SAM superfamily DW350_RS09295 PF00155 Aminotransferase class I and II DW350_RS09300 PF08241 Methyltransferase domain DW350_RS09300 PF12697 Alpha/beta hydrolase family DW350_RS09310 PF13419 Haloacid dehalogenase-like hydrolase DW350_RS09315 PF12833 Helix-turn-helix domain DW350_RS09320 PF07690 Major Facilitator Superfamily DW350_RS09325 PF00877 NlpC/P60 family DW350_RS09330 PF02230 Phospholipase/Carboxylesterase DW350_RS09335 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DW350_RS09335 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DW350_RS09340 PF03575 Peptidase family S51 DW350_RS09345 PF01435 Peptidase family M48 DW350_RS09365 PF00271 Helicase conserved C-terminal domain DW350_RS09365 PF04851 Type III restriction enzyme, res subunit DW350_RS09370 PF13426 PAS domain DW350_RS09370 PF08447 PAS fold DW350_RS09370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW350_RS09375 PF01451 Low molecular weight phosphotyrosine protein phosphatase DW350_RS09380 PF00575 S1 RNA binding domain DW350_RS09380 PF12111 Polyribonucleotide phosphorylase C terminal DW350_RS09380 PF10150 Ribonuclease E/G family DW350_RS09385 PF00849 RNA pseudouridylate synthase DW350_RS09385 PF01479 S4 domain DW350_RS09390 PF13419 Haloacid dehalogenase-like hydrolase DW350_RS09395 PF02545 Maf-like protein DW350_RS09400 PF02620 Large ribosomal RNA subunit accumulation protein YceD DW350_RS09405 PF01783 Ribosomal L32p protein family DW350_RS09410 PF02504 Fatty acid synthesis protein DW350_RS09415 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DW350_RS09415 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DW350_RS09420 PF00698 Acyl transferase domain DW350_RS09430 PF00550 Phosphopantetheine attachment site DW350_RS09435 PF02801 Beta-ketoacyl synthase, C-terminal domain DW350_RS09435 PF00109 Beta-ketoacyl synthase, N-terminal domain DW350_RS09440 PF01063 Amino-transferase class IV DW350_RS09445 PF02618 YceG-like family DW350_RS09450 PF02223 Thymidylate kinase DW350_RS09455 PF09115 DNA polymerase III, delta subunit, C terminal DW350_RS09460 PF01026 TatD related DNase DW350_RS09465 PF03358 NADPH-dependent FMN reductase DW350_RS09470 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF DW350_RS09470 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF DW350_RS09470 PF01189 16S rRNA methyltransferase RsmB/F DW350_RS09475 PF02470 MlaD protein DW350_RS09480 PF04403 Paraquat-inducible protein A DW350_RS09490 PF00285 Citrate synthase, C-terminal domain DW350_RS09495 PF00694 Aconitase C-terminal domain DW350_RS09495 PF00330 Aconitase family (aconitate hydratase) DW350_RS09500 PF04303 PrpF protein DW350_RS09505 PF07130 YebG protein DW350_RS09515 PF13185 GAF domain DW350_RS09520 PF17516 ProQ C-terminal domain DW350_RS09520 PF04352 ProQ/FINO family DW350_RS09525 PF03572 Peptidase family S41 DW350_RS09525 PF17804 Tail specific protease N-terminal domain DW350_RS09525 PF00595 PDZ domain DW350_RS09525 PF11818 C-terminal domain of tail specific protease (DUF3340) DW350_RS09530 PF00209 Sodium:neurotransmitter symporter family DW350_RS09535 PF03553 Na+/H+ antiporter family DW350_RS09540 PF11940 Domain of unknown function (DUF3458) Ig-like fold DW350_RS09540 PF01433 Peptidase family M1 domain DW350_RS09540 PF17432 Domain of unknown function (DUF3458_C) ARM repeats DW350_RS09550 PF05088 Bacterial NAD-glutamate dehydrogenase DW350_RS09555 PF01180 Dihydroorotate dehydrogenase DW350_RS09560 PF07126 Cell-division protein ZapC DW350_RS09565 PF01170 Putative RNA methylase family UPF0020 DW350_RS09565 PF02926 THUMP domain DW350_RS09565 PF10672 S-adenosylmethionine-dependent methyltransferase DW350_RS09570 PF00005 ABC transporter DW350_RS09570 PF12848 ABC transporter DW350_RS09570 PF16326 ABC transporter C-terminal domain DW350_RS09580 PF04957 Ribosome modulation factor DW350_RS09585 PF07977 FabA-like domain DW350_RS09590 PF05362 Lon protease (S16) C-terminal proteolytic domain DW350_RS09590 PF13654 AAA domain DW350_RS09595 PF07992 Pyridine nucleotide-disulphide oxidoreductase DW350_RS09605 PF12833 Helix-turn-helix domain DW350_RS09605 PF06719 AraC-type transcriptional regulator N-terminus DW350_RS09610 PF01258 Prokaryotic dksA/traR C4-type zinc finger DW350_RS09620 PF03466 LysR substrate binding domain DW350_RS09620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS09630 PF00893 Small Multidrug Resistance protein DW350_RS09650 PF13545 Crp-like helix-turn-helix domain DW350_RS09650 PF00027 Cyclic nucleotide-binding domain DW350_RS09655 PF03922 OmpW family DW350_RS09660 PF00582 Universal stress protein family DW350_RS09665 PF01171 PP-loop family DW350_RS09680 PF17773 UPF0176 acylphosphatase like domain DW350_RS09680 PF00581 Rhodanese-like domain DW350_RS09685 PF01810 LysE type translocator DW350_RS09690 PF00005 ABC transporter DW350_RS09690 PF08402 TOBE domain DW350_RS09695 PF00528 Binding-protein-dependent transport system inner membrane component DW350_RS09700 PF00528 Binding-protein-dependent transport system inner membrane component DW350_RS09705 PF13416 Bacterial extracellular solute-binding protein DW350_RS09710 PF02146 Sir2 family DW350_RS09715 PF00072 Response regulator receiver domain DW350_RS09715 PF00196 Bacterial regulatory proteins, luxR family DW350_RS09720 PF00072 Response regulator receiver domain DW350_RS09720 PF01627 Hpt domain DW350_RS09720 PF00512 His Kinase A (phospho-acceptor) domain DW350_RS09720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW350_RS09725 PF04341 Protein of unknown function, DUF485 DW350_RS09730 PF00474 Sodium:solute symporter family DW350_RS09735 PF13193 AMP-binding enzyme C-terminal domain DW350_RS09735 PF16177 Acetyl-coenzyme A synthetase N-terminus DW350_RS09735 PF00501 AMP-binding enzyme DW350_RS09760 PF03447 Homoserine dehydrogenase, NAD binding domain DW350_RS09760 PF00742 Homoserine dehydrogenase DW350_RS09760 PF13840 ACT domain DW350_RS09760 PF01842 ACT domain DW350_RS09760 PF00696 Amino acid kinase family DW350_RS09765 PF08544 GHMP kinases C terminal DW350_RS09765 PF00288 GHMP kinases N terminal domain DW350_RS09770 PF00291 Pyridoxal-phosphate dependent enzyme DW350_RS09770 PF14821 Threonine synthase N terminus DW350_RS09775 PF01040 UbiA prenyltransferase family DW350_RS09780 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DW350_RS09785 PF00510 Cytochrome c oxidase subunit III DW350_RS09790 PF00115 Cytochrome C and Quinol oxidase polypeptide I DW350_RS09795 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DW350_RS09795 PF06481 COX Aromatic Rich Motif DW350_RS09800 PF16868 NMT1-like family DW350_RS09810 PF00005 ABC transporter DW350_RS09820 PF01817 Chorismate mutase type II DW350_RS09820 PF02153 Prephenate dehydrogenase DW350_RS09825 PF00793 DAHP synthetase I family DW350_RS09830 PF01545 Cation efflux family DW350_RS09840 PF08411 Exonuclease C-terminal DW350_RS09840 PF00929 Exonuclease DW350_RS09850 PF01132 Elongation factor P (EF-P) OB domain DW350_RS09850 PF08207 Elongation factor P (EF-P) KOW-like domain DW350_RS09850 PF09285 Elongation factor P, C-terminal DW350_RS09860 PF02308 MgtC family DW350_RS09865 PF02743 Cache domain DW350_RS09865 PF00672 HAMP domain DW350_RS09865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW350_RS09870 PF02743 Cache domain DW350_RS09870 PF00672 HAMP domain DW350_RS09870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW350_RS09920 PF00106 short chain dehydrogenase DW350_RS09930 PF00875 DNA photolyase DW350_RS09930 PF03441 FAD binding domain of DNA photolyase DW350_RS09935 PF13411 MerR HTH family regulatory protein DW350_RS09940 PF08349 Protein of unknown function (DUF1722) DW350_RS09950 PF00216 Bacterial DNA-binding protein DW350_RS09955 PF01588 Putative tRNA binding domain DW350_RS09955 PF03484 tRNA synthetase B5 domain DW350_RS09955 PF03483 B3/4 domain DW350_RS09955 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DW350_RS09955 PF03147 Ferredoxin-fold anticodon binding domain DW350_RS09960 PF01409 tRNA synthetases class II core domain (F) DW350_RS09960 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DW350_RS09965 PF00453 Ribosomal protein L20 DW350_RS09970 PF01632 Ribosomal protein L35 DW350_RS09975 PF00707 Translation initiation factor IF-3, C-terminal domain DW350_RS09975 PF05198 Translation initiation factor IF-3, N-terminal domain DW350_RS09980 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DW350_RS09980 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DW350_RS09980 PF03129 Anticodon binding domain DW350_RS09980 PF02824 TGS domain DW350_RS09985 PF04151 Bacterial pre-peptidase C-terminal domain DW350_RS09985 PF04389 Peptidase family M28 DW350_RS09995 PF03881 Fructosamine kinase DW350_RS10010 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ DW350_RS10015 PF01479 S4 domain DW350_RS10015 PF00849 RNA pseudouridylate synthase DW350_RS10020 PF00155 Aminotransferase class I and II DW350_RS10045 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DW350_RS10050 PF18073 Rubredoxin metal binding domain DW350_RS10060 PF00216 Bacterial DNA-binding protein DW350_RS10065 PF00575 S1 RNA binding domain DW350_RS10070 PF02224 Cytidylate kinase DW350_RS10075 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DW350_RS10080 PF01817 Chorismate mutase type II DW350_RS10080 PF02153 Prephenate dehydrogenase DW350_RS10085 PF00266 Aminotransferase class-V DW350_RS10090 PF00521 DNA gyrase/topoisomerase IV, subunit A DW350_RS10090 PF03989 DNA gyrase C-terminal domain, beta-propeller DW350_RS10100 PF13419 Haloacid dehalogenase-like hydrolase DW350_RS10105 PF02867 Ribonucleotide reductase, barrel domain DW350_RS10105 PF00317 Ribonucleotide reductase, all-alpha domain DW350_RS10105 PF03477 ATP cone domain DW350_RS10110 PF00268 Ribonucleotide reductase, small chain DW350_RS10130 PF01494 FAD binding domain DW350_RS10135 PF00109 Beta-ketoacyl synthase, N-terminal domain DW350_RS10135 PF02801 Beta-ketoacyl synthase, C-terminal domain DW350_RS10150 PF02801 Beta-ketoacyl synthase, C-terminal domain DW350_RS10150 PF00109 Beta-ketoacyl synthase, N-terminal domain DW350_RS10175 PF00221 Aromatic amino acid lyase DW350_RS10185 PF07977 FabA-like domain DW350_RS10190 PF13193 AMP-binding enzyme C-terminal domain DW350_RS10190 PF00501 AMP-binding enzyme DW350_RS10200 PF00550 Phosphopantetheine attachment site DW350_RS10205 PF00550 Phosphopantetheine attachment site DW350_RS10230 PF01227 GTP cyclohydrolase I DW350_RS10235 PF00701 Dihydrodipicolinate synthetase family DW350_RS10240 PF00255 Glutathione peroxidase DW350_RS10245 PF03441 FAD binding domain of DNA photolyase DW350_RS10245 PF00875 DNA photolyase DW350_RS10250 PF04542 Sigma-70 region 2 DW350_RS10250 PF04545 Sigma-70, region 4 DW350_RS10260 PF02525 Flavodoxin-like fold DW350_RS10265 PF00209 Sodium:neurotransmitter symporter family DW350_RS10275 PF12679 ABC-2 family transporter protein DW350_RS10280 PF00005 ABC transporter DW350_RS10290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DW350_RS10295 PF00005 ABC transporter DW350_RS10300 PF02687 FtsX-like permease family DW350_RS10300 PF12704 MacB-like periplasmic core domain DW350_RS10305 PF01081 KDPG and KHG aldolase DW350_RS10310 PF00920 Dehydratase family DW350_RS10315 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DW350_RS10320 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DW350_RS10320 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DW350_RS10325 PF01380 SIS domain DW350_RS10325 PF01418 Helix-turn-helix domain, rpiR family DW350_RS10330 PF00224 Pyruvate kinase, barrel domain DW350_RS10330 PF02887 Pyruvate kinase, alpha/beta domain DW350_RS10335 PF00892 EamA-like transporter family DW350_RS10340 PF00072 Response regulator receiver domain DW350_RS10340 PF04397 LytTr DNA-binding domain DW350_RS10345 PF07694 5TMR of 5TMR-LYT DW350_RS10345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW350_RS10345 PF06580 Histidine kinase DW350_RS10350 PF01636 Phosphotransferase enzyme family DW350_RS10355 PF04973 Nicotinamide mononucleotide transporter DW350_RS10365 PF00593 TonB dependent receptor DW350_RS10365 PF07715 TonB-dependent Receptor Plug Domain DW350_RS10370 PF01230 HIT domain DW350_RS10385 PF00375 Sodium:dicarboxylate symporter family DW350_RS10405 PF01226 Formate/nitrite transporter DW350_RS10410 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DW350_RS10410 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DW350_RS10420 PF00593 TonB dependent receptor DW350_RS10420 PF07715 TonB-dependent Receptor Plug Domain DW350_RS10430 PF03600 Citrate transporter DW350_RS10430 PF02080 TrkA-C domain DW350_RS10435 PF10114 Sensory domain found in PocR DW350_RS10435 PF12833 Helix-turn-helix domain DW350_RS10450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS10450 PF03466 LysR substrate binding domain DW350_RS10510 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP DW350_RS10510 PF12557 Cob(I)alamin adenosyltransferase N terminal DW350_RS10515 PF00034 Cytochrome c DW350_RS10515 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DW350_RS10520 PF00732 GMC oxidoreductase DW350_RS10520 PF05199 GMC oxidoreductase DW350_RS10525 PF13618 Gluconate 2-dehydrogenase subunit 3 DW350_RS10535 PF02322 Cytochrome bd terminal oxidase subunit II DW350_RS10540 PF01654 Cytochrome bd terminal oxidase subunit I DW350_RS10545 PF00392 Bacterial regulatory proteins, gntR family DW350_RS10545 PF00155 Aminotransferase class I and II DW350_RS10550 PF01613 Flavin reductase like domain DW350_RS10555 PF00884 Sulfatase DW350_RS10565 PF01588 Putative tRNA binding domain DW350_RS10615 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS10625 PF02311 AraC-like ligand binding domain DW350_RS10625 PF12833 Helix-turn-helix domain DW350_RS10630 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DW350_RS10630 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DW350_RS10660 PF07690 Major Facilitator Superfamily DW350_RS10665 PF00561 alpha/beta hydrolase fold DW350_RS10680 PF01144 Coenzyme A transferase DW350_RS10685 PF01144 Coenzyme A transferase DW350_RS10690 PF01343 Peptidase family S49 DW350_RS10690 PF08496 Peptidase family S49 N-terminal DW350_RS10695 PF12262 Bacterial virulence factor lipase N-terminal DW350_RS10700 PF00106 short chain dehydrogenase DW350_RS10705 PF00294 pfkB family carbohydrate kinase DW350_RS10710 PF12832 MFS_1 like family DW350_RS10720 PF00753 Metallo-beta-lactamase superfamily DW350_RS10730 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS10730 PF01590 GAF domain DW350_RS10730 PF00360 Phytochrome region DW350_RS10730 PF00563 EAL domain DW350_RS10735 PF00549 CoA-ligase DW350_RS10735 PF02629 CoA binding domain DW350_RS10740 PF08442 ATP-grasp domain DW350_RS10740 PF00549 CoA-ligase DW350_RS10745 PF02817 e3 binding domain DW350_RS10745 PF00364 Biotin-requiring enzyme DW350_RS10745 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DW350_RS10750 PF16870 2-oxoglutarate dehydrogenase C-terminal DW350_RS10750 PF00676 Dehydrogenase E1 component DW350_RS10750 PF02779 Transketolase, pyrimidine binding domain DW350_RS10750 PF16078 2-oxoglutarate dehydrogenase N-terminus DW350_RS10755 PF13085 2Fe-2S iron-sulfur cluster binding domain DW350_RS10760 PF00890 FAD binding domain DW350_RS10760 PF02910 Fumarate reductase flavoprotein C-term DW350_RS10765 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DW350_RS10770 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DW350_RS10775 PF00285 Citrate synthase, C-terminal domain DW350_RS10785 PF04185 Phosphoesterase family DW350_RS10785 PF05506 Domain of unknown function (DUF756) DW350_RS10800 PF00512 His Kinase A (phospho-acceptor) domain DW350_RS10800 PF08448 PAS fold DW350_RS10800 PF13188 PAS domain DW350_RS10800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW350_RS10800 PF00072 Response regulator receiver domain DW350_RS10805 PF00072 Response regulator receiver domain DW350_RS10805 PF00486 Transcriptional regulatory protein, C terminal DW350_RS10810 PF01339 CheB methylesterase DW350_RS10810 PF00072 Response regulator receiver domain DW350_RS10815 PF03975 CheD chemotactic sensory transduction DW350_RS10820 PF01739 CheR methyltransferase, SAM binding domain DW350_RS10820 PF03705 CheR methyltransferase, all-alpha domain DW350_RS10825 PF00672 HAMP domain DW350_RS10825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW350_RS10825 PF02203 Tar ligand binding domain homologue DW350_RS10830 PF01584 CheW-like domain DW350_RS10835 PF01584 CheW-like domain DW350_RS10840 PF01627 Hpt domain DW350_RS10840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW350_RS10840 PF01584 CheW-like domain DW350_RS10840 PF02895 Signal transducing histidine kinase, homodimeric domain DW350_RS10840 PF09078 CheY binding DW350_RS10845 PF00072 Response regulator receiver domain DW350_RS10860 PF03594 Benzoate membrane transport protein DW350_RS10865 PF07883 Cupin domain DW350_RS10865 PF01381 Helix-turn-helix DW350_RS10870 PF04616 Glycosyl hydrolases family 43 DW350_RS10875 PF02348 Cytidylyltransferase DW350_RS10880 PF03966 Trm112p-like protein DW350_RS10885 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DW350_RS10890 PF00664 ABC transporter transmembrane region DW350_RS10890 PF00005 ABC transporter DW350_RS10895 PF03772 Competence protein DW350_RS10895 PF00753 Metallo-beta-lactamase superfamily DW350_RS10905 PF02687 FtsX-like permease family DW350_RS10905 PF12704 MacB-like periplasmic core domain DW350_RS10910 PF00005 ABC transporter DW350_RS10915 PF02687 FtsX-like permease family DW350_RS10915 PF12704 MacB-like periplasmic core domain DW350_RS10925 PF04371 Porphyromonas-type peptidyl-arginine deiminase DW350_RS10935 PF02559 CarD-like/TRCF domain DW350_RS10935 PF03461 TRCF domain DW350_RS10935 PF00270 DEAD/DEAH box helicase DW350_RS10935 PF00271 Helicase conserved C-terminal domain DW350_RS10935 PF17757 UvrB interaction domain DW350_RS10945 PF13407 Periplasmic binding protein domain DW350_RS10955 PF00933 Glycosyl hydrolase family 3 N terminal domain DW350_RS10960 PF09317 Domain of unknown function (DUF1974) DW350_RS10960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DW350_RS10960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DW350_RS10960 PF02770 Acyl-CoA dehydrogenase, middle domain DW350_RS10965 PF16295 Tetracyclin repressor-like, C-terminal domain DW350_RS10965 PF00440 Bacterial regulatory proteins, tetR family DW350_RS10985 PF02355 Protein export membrane protein DW350_RS10985 PF07549 SecD/SecF GG Motif DW350_RS10995 PF00912 Transglycosylase DW350_RS11000 PF00795 Carbon-nitrogen hydrolase DW350_RS11005 PF02554 Carbon starvation protein CstA DW350_RS11010 PF04397 LytTr DNA-binding domain DW350_RS11010 PF00072 Response regulator receiver domain DW350_RS11015 PF07694 5TMR of 5TMR-LYT DW350_RS11015 PF06580 Histidine kinase DW350_RS11020 PF01112 Asparaginase DW350_RS11050 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DW350_RS11050 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DW350_RS11060 PF13426 PAS domain DW350_RS11060 PF08447 PAS fold DW350_RS11060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW350_RS11120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW350_RS11120 PF00672 HAMP domain DW350_RS11120 PF02743 Cache domain DW350_RS11125 PF03831 PhnA domain DW350_RS11125 PF08274 PhnA Zinc-Ribbon DW350_RS11130 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS11130 PF00563 EAL domain DW350_RS11130 PF03707 Bacterial signalling protein N terminal repeat DW350_RS11135 PF03466 LysR substrate binding domain DW350_RS11135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS11160 PF02627 Carboxymuconolactone decarboxylase family DW350_RS11180 PF06865 Pyrimidine/purine nucleoside phosphorylase DW350_RS11190 PF00171 Aldehyde dehydrogenase family DW350_RS11195 PF00465 Iron-containing alcohol dehydrogenase DW350_RS11200 PF07690 Major Facilitator Superfamily DW350_RS11205 PF01212 Beta-eliminating lyase DW350_RS11220 PF06426 Serine acetyltransferase, N-terminal DW350_RS11220 PF00132 Bacterial transferase hexapeptide (six repeats) DW350_RS11235 PF01979 Amidohydrolase family DW350_RS11245 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DW350_RS11370 PF03466 LysR substrate binding domain DW350_RS11370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS11380 PF07690 Major Facilitator Superfamily DW350_RS11390 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region DW350_RS11390 PF07676 WD40-like Beta Propeller Repeat DW350_RS11390 PF00326 Prolyl oligopeptidase family DW350_RS11400 PF04715 Anthranilate synthase component I, N terminal region DW350_RS11400 PF00425 chorismate binding enzyme DW350_RS11405 PF00293 NUDIX domain DW350_RS11410 PF03313 Serine dehydratase alpha chain DW350_RS11410 PF03315 Serine dehydratase beta chain DW350_RS11415 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) DW350_RS11420 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DW350_RS11420 PF00361 Proton-conducting membrane transporter DW350_RS11425 PF03466 LysR substrate binding domain DW350_RS11425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS11435 PF09905 DNA-binding protein VF530 DW350_RS11440 PF01794 Ferric reductase like transmembrane component DW350_RS11445 PF00174 Oxidoreductase molybdopterin binding domain DW350_RS11455 PF01914 MarC family integral membrane protein DW350_RS11460 PF13378 Enolase C-terminal domain-like DW350_RS11465 PF03466 LysR substrate binding domain DW350_RS11465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS11470 PF00939 Sodium:sulfate symporter transmembrane region DW350_RS11475 PF02233 NAD(P) transhydrogenase beta subunit DW350_RS11480 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DW350_RS11480 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DW350_RS11480 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DW350_RS11485 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS11490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS11490 PF03466 LysR substrate binding domain DW350_RS11500 PF08272 Topoisomerase I zinc-ribbon-like DW350_RS11500 PF01396 Topoisomerase DNA binding C4 zinc finger DW350_RS11500 PF01131 DNA topoisomerase DW350_RS11500 PF01751 Toprim domain DW350_RS11505 PF04996 Succinylarginine dihydrolase DW350_RS11510 PF00375 Sodium:dicarboxylate symporter family DW350_RS11520 PF13344 Haloacid dehalogenase-like hydrolase DW350_RS11530 PF00255 Glutathione peroxidase DW350_RS11535 PF02254 TrkA-N domain DW350_RS11535 PF00999 Sodium/hydrogen exchanger family DW350_RS11545 PF05552 Conserved TM helix DW350_RS11545 PF00924 Mechanosensitive ion channel DW350_RS11550 PF03458 UPF0126 domain DW350_RS11560 PF00266 Aminotransferase class-V DW350_RS11575 PF01966 HD domain DW350_RS11590 PF01433 Peptidase family M1 domain DW350_RS11590 PF11838 ERAP1-like C-terminal domain DW350_RS11600 PF01741 Large-conductance mechanosensitive channel, MscL DW350_RS11605 PF08543 Phosphomethylpyrimidine kinase DW350_RS11610 PF01209 ubiE/COQ5 methyltransferase family DW350_RS11615 PF01784 NIF3 (NGG1p interacting factor 3) DW350_RS11630 PF01479 S4 domain DW350_RS11630 PF00849 RNA pseudouridylate synthase DW350_RS11640 PF04079 Segregation and condensation complex subunit ScpB DW350_RS11645 PF02616 Segregation and condensation protein ScpA DW350_RS11650 PF01300 Telomere recombination DW350_RS11655 PF02811 PHP domain DW350_RS11660 PF00793 DAHP synthetase I family DW350_RS11660 PF18152 DAHP synthase ferredoxin-like domain DW350_RS11665 PF00425 chorismate binding enzyme DW350_RS11665 PF04715 Anthranilate synthase component I, N terminal region DW350_RS11670 PF00117 Glutamine amidotransferase class-I DW350_RS11675 PF02885 Glycosyl transferase family, helical bundle domain DW350_RS11675 PF00591 Glycosyl transferase family, a/b domain DW350_RS11680 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DW350_RS11680 PF00218 Indole-3-glycerol phosphate synthase DW350_RS11685 PF00291 Pyridoxal-phosphate dependent enzyme DW350_RS11690 PF00290 Tryptophan synthase alpha chain DW350_RS11695 PF12843 Putative quorum-sensing-regulated virulence factor DW350_RS11700 PF00313 'Cold-shock' DNA-binding domain DW350_RS11705 PF00583 Acetyltransferase (GNAT) family DW350_RS11710 PF02080 TrkA-C domain DW350_RS11710 PF08443 RimK-like ATP-grasp domain DW350_RS11710 PF18030 RimK PreATP-grasp domain DW350_RS11715 PF04279 Intracellular septation protein A DW350_RS11720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW350_RS11720 PF02743 Cache domain DW350_RS11720 PF00672 HAMP domain DW350_RS11725 PF03795 YCII-related domain DW350_RS11730 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DW350_RS11730 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DW350_RS11735 PF03788 LrgA family DW350_RS11740 PF04172 LrgB-like family DW350_RS11745 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DW350_RS11745 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DW350_RS11750 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region DW350_RS11750 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DW350_RS11760 PF00121 Triosephosphate isomerase DW350_RS11775 PF00691 OmpA family DW350_RS11775 PF01389 OmpA-like transmembrane domain DW350_RS11795 PF13286 Phosphohydrolase-associated domain DW350_RS11795 PF01966 HD domain DW350_RS11800 PF01914 MarC family integral membrane protein DW350_RS11805 PF02810 SEC-C motif DW350_RS11810 PF02667 Short chain fatty acid transporter DW350_RS11815 PF04204 Homoserine O-succinyltransferase DW350_RS11820 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DW350_RS11820 PF01243 Pyridoxamine 5'-phosphate oxidase DW350_RS11850 PF01042 Endoribonuclease L-PSP DW350_RS11855 PF03372 Endonuclease/Exonuclease/phosphatase family DW350_RS11870 PF00390 Malic enzyme, N-terminal domain DW350_RS11870 PF03949 Malic enzyme, NAD binding domain DW350_RS11875 PF03061 Thioesterase superfamily DW350_RS11885 PF07085 DRTGG domain DW350_RS11885 PF01515 Phosphate acetyl/butaryl transferase DW350_RS11890 PF01734 Patatin-like phospholipase DW350_RS11905 PF00474 Sodium:solute symporter family DW350_RS11915 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DW350_RS11915 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DW350_RS11920 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DW350_RS11920 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DW350_RS11920 PF00378 Enoyl-CoA hydratase/isomerase DW350_RS11925 PF00378 Enoyl-CoA hydratase/isomerase DW350_RS11930 PF02770 Acyl-CoA dehydrogenase, middle domain DW350_RS11930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DW350_RS11930 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DW350_RS11935 PF00171 Aldehyde dehydrogenase family DW350_RS11940 PF02803 Thiolase, C-terminal domain DW350_RS11940 PF00108 Thiolase, N-terminal domain DW350_RS11945 PF00376 MerR family regulatory protein DW350_RS11945 PF09278 MerR, DNA binding DW350_RS11950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DW350_RS11950 PF02770 Acyl-CoA dehydrogenase, middle domain DW350_RS11950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DW350_RS11955 PF01039 Carboxyl transferase domain DW350_RS11965 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DW350_RS11965 PF00364 Biotin-requiring enzyme DW350_RS11965 PF00289 Biotin carboxylase, N-terminal domain DW350_RS11965 PF02785 Biotin carboxylase C-terminal domain DW350_RS11970 PF00682 HMGL-like DW350_RS11975 PF08447 PAS fold DW350_RS11975 PF08448 PAS fold DW350_RS11975 PF00563 EAL domain DW350_RS11975 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS11990 PF00265 Thymidine kinase DW350_RS11995 PF01012 Electron transfer flavoprotein domain DW350_RS11995 PF00766 Electron transfer flavoprotein FAD-binding domain DW350_RS12000 PF01012 Electron transfer flavoprotein domain DW350_RS12015 PF00925 GTP cyclohydrolase II DW350_RS12020 PF04055 Radical SAM superfamily DW350_RS12020 PF18693 TRAM domain DW350_RS12020 PF00919 Uncharacterized protein family UPF0004 DW350_RS12025 PF00672 HAMP domain DW350_RS12025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW350_RS12030 PF10672 S-adenosylmethionine-dependent methyltransferase DW350_RS12030 PF17785 PUA-like domain DW350_RS12035 PF00011 Hsp20/alpha crystallin family DW350_RS12045 PF00270 DEAD/DEAH box helicase DW350_RS12045 PF04408 Helicase associated domain (HA2) DW350_RS12045 PF00271 Helicase conserved C-terminal domain DW350_RS12045 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DW350_RS12045 PF11898 Domain of unknown function (DUF3418) DW350_RS12050 PF00571 CBS domain DW350_RS12055 PF06167 Glucose-regulated metallo-peptidase M90 DW350_RS12070 PF10415 Fumarase C C-terminus DW350_RS12070 PF00206 Lyase DW350_RS12075 PF12241 Trans-2-enoyl-CoA reductase catalytic region DW350_RS12075 PF07055 Enoyl reductase FAD binding domain DW350_RS12075 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase DW350_RS12090 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DW350_RS12090 PF01336 OB-fold nucleic acid binding domain DW350_RS12090 PF07733 Bacterial DNA polymerase III alpha NTPase domain DW350_RS12090 PF14579 Helix-hairpin-helix motif DW350_RS12090 PF02811 PHP domain DW350_RS12095 PF07715 TonB-dependent Receptor Plug Domain DW350_RS12095 PF00593 TonB dependent receptor DW350_RS12105 PF00202 Aminotransferase class-III DW350_RS12110 PF00440 Bacterial regulatory proteins, tetR family DW350_RS12115 PF00106 short chain dehydrogenase DW350_RS12125 PF07690 Major Facilitator Superfamily DW350_RS12130 PF00232 Glycosyl hydrolase family 1 DW350_RS12165 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DW350_RS12165 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DW350_RS12165 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DW350_RS12175 PF01370 NAD dependent epimerase/dehydratase family DW350_RS12180 PF01370 NAD dependent epimerase/dehydratase family DW350_RS12185 PF00483 Nucleotidyl transferase DW350_RS12190 PF02397 Bacterial sugar transferase DW350_RS12195 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DW350_RS12195 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DW350_RS12195 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DW350_RS12195 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DW350_RS12200 PF01050 Mannose-6-phosphate isomerase DW350_RS12200 PF00483 Nucleotidyl transferase DW350_RS12205 PF00534 Glycosyl transferases group 1 DW350_RS12205 PF13439 Glycosyltransferase Family 4 DW350_RS12215 PF13439 Glycosyltransferase Family 4 DW350_RS12215 PF00534 Glycosyl transferases group 1 DW350_RS12220 PF00535 Glycosyl transferase family 2 DW350_RS12225 PF01370 NAD dependent epimerase/dehydratase family DW350_RS12230 PF16363 GDP-mannose 4,6 dehydratase DW350_RS12235 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DW350_RS12250 PF01370 NAD dependent epimerase/dehydratase family DW350_RS12265 PF13807 G-rich domain on putative tyrosine kinase DW350_RS12265 PF13614 AAA domain DW350_RS12265 PF02706 Chain length determinant protein DW350_RS12270 PF10531 SLBB domain DW350_RS12270 PF02563 Polysaccharide biosynthesis/export protein DW350_RS12275 PF02357 Transcription termination factor nusG DW350_RS12280 PF00854 POT family DW350_RS12285 PF02028 BCCT, betaine/carnitine/choline family transporter DW350_RS12290 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS12295 PF00072 Response regulator receiver domain DW350_RS12300 PF04333 MlaA lipoprotein DW350_RS12310 PF03918 Cytochrome C biogenesis protein DW350_RS12315 PF08534 Redoxin DW350_RS12320 PF01578 Cytochrome C assembly protein DW350_RS12320 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DW350_RS12325 PF03100 CcmE DW350_RS12330 PF04995 Heme exporter protein D (CcmD) DW350_RS12335 PF01578 Cytochrome C assembly protein DW350_RS12340 PF03379 CcmB protein DW350_RS12345 PF00005 ABC transporter DW350_RS12365 PF01584 CheW-like domain DW350_RS12375 PF13614 AAA domain DW350_RS12380 PF13677 Membrane MotB of proton-channel complex MotA/MotB DW350_RS12380 PF00691 OmpA family DW350_RS12385 PF01618 MotA/TolQ/ExbB proton channel family DW350_RS12390 PF00072 Response regulator receiver domain DW350_RS12390 PF01339 CheB methylesterase DW350_RS12395 PF02895 Signal transducing histidine kinase, homodimeric domain DW350_RS12395 PF00072 Response regulator receiver domain DW350_RS12395 PF01584 CheW-like domain DW350_RS12395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW350_RS12395 PF01627 Hpt domain DW350_RS12400 PF04344 Chemotaxis phosphatase, CheZ DW350_RS12405 PF00072 Response regulator receiver domain DW350_RS12410 PF04539 Sigma-70 region 3 DW350_RS12410 PF04545 Sigma-70, region 4 DW350_RS12410 PF04542 Sigma-70 region 2 DW350_RS12415 PF10609 NUBPL iron-transfer P-loop NTPase DW350_RS12420 PF00448 SRP54-type protein, GTPase domain DW350_RS12425 PF00771 FHIPEP family DW350_RS12430 PF01312 FlhB HrpN YscU SpaS Family DW350_RS12435 PF01311 Bacterial export proteins, family 1 DW350_RS12440 PF01313 Bacterial export proteins, family 3 DW350_RS12445 PF00813 FliP family DW350_RS12450 PF04347 Flagellar biosynthesis protein, FliO DW350_RS12455 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DW350_RS12460 PF02154 Flagellar motor switch protein FliM DW350_RS12460 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DW350_RS12485 PF02108 Flagellar assembly protein FliH DW350_RS12490 PF14842 FliG N-terminal domain DW350_RS12490 PF01706 FliG C-terminal domain DW350_RS12490 PF14841 FliG middle domain DW350_RS12495 PF08345 Flagellar M-ring protein C-terminal DW350_RS12495 PF01514 Secretory protein of YscJ/FliF family DW350_RS12500 PF02049 Flagellar hook-basal body complex protein FliE DW350_RS12505 PF02954 Bacterial regulatory protein, Fis family DW350_RS12505 PF00072 Response regulator receiver domain DW350_RS12505 PF00158 Sigma-54 interaction domain DW350_RS12510 PF00512 His Kinase A (phospho-acceptor) domain DW350_RS12510 PF13188 PAS domain DW350_RS12510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW350_RS12515 PF00158 Sigma-54 interaction domain DW350_RS12515 PF02954 Bacterial regulatory protein, Fis family DW350_RS12515 PF06490 Flagellar regulatory protein FleQ DW350_RS12525 PF02719 Polysaccharide biosynthesis protein DW350_RS12530 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DW350_RS12535 PF02348 Cytidylyltransferase DW350_RS12545 PF03102 NeuB family DW350_RS12545 PF08666 SAF domain DW350_RS12570 PF02561 Flagellar protein FliS DW350_RS12575 PF07195 Flagellar hook-associated protein 2 C-terminus DW350_RS12575 PF02465 Flagellar hook-associated protein 2 N-terminus DW350_RS12575 PF07196 Flagellin hook IN motif DW350_RS12585 PF00700 Bacterial flagellin C-terminal helical region DW350_RS12585 PF00669 Bacterial flagellin N-terminal helical region DW350_RS12585 PF07196 Flagellin hook IN motif DW350_RS12590 PF00700 Bacterial flagellin C-terminal helical region DW350_RS12590 PF07196 Flagellin hook IN motif DW350_RS12590 PF00669 Bacterial flagellin N-terminal helical region DW350_RS12600 PF00460 Flagella basal body rod protein DW350_RS12600 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DW350_RS12605 PF10135 Rod binding protein DW350_RS12605 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DW350_RS12610 PF02119 Flagellar P-ring protein DW350_RS12615 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DW350_RS12615 PF00460 Flagella basal body rod protein DW350_RS12620 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DW350_RS12620 PF00460 Flagella basal body rod protein DW350_RS12625 PF07559 Flagellar basal body protein FlaE DW350_RS12625 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DW350_RS12625 PF00460 Flagella basal body rod protein DW350_RS12635 PF00460 Flagella basal body rod protein DW350_RS12635 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DW350_RS12640 PF00460 Flagella basal body rod protein DW350_RS12645 PF03705 CheR methyltransferase, all-alpha domain DW350_RS12645 PF01739 CheR methyltransferase, SAM binding domain DW350_RS12650 PF01584 CheW-like domain DW350_RS12650 PF00072 Response regulator receiver domain DW350_RS12655 PF13144 Chaperone for flagella basal body P-ring formation DW350_RS12675 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DW350_RS12680 PF02664 S-Ribosylhomocysteinase (LuxS) DW350_RS12700 PF00892 EamA-like transporter family DW350_RS12715 PF02927 Cellulase N-terminal ig-like domain DW350_RS12715 PF02013 Cellulose or protein binding domain DW350_RS12715 PF00553 Cellulose binding domain DW350_RS12715 PF00759 Glycosyl hydrolase family 9 DW350_RS12715 PF00801 PKD domain DW350_RS12720 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DW350_RS12735 PF12146 Serine aminopeptidase, S33 DW350_RS12755 PF04235 Protein of unknown function (DUF418) DW350_RS12765 PF14718 Soluble lytic murein transglycosylase L domain DW350_RS12765 PF01464 Transglycosylase SLT domain DW350_RS12770 PF01625 Peptide methionine sulfoxide reductase DW350_RS12780 PF08173 Membrane bound YbgT-like protein DW350_RS12785 PF02322 Cytochrome bd terminal oxidase subunit II DW350_RS12790 PF01654 Cytochrome bd terminal oxidase subunit I DW350_RS12805 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DW350_RS12810 PF00528 Binding-protein-dependent transport system inner membrane component DW350_RS12815 PF00571 CBS domain DW350_RS12815 PF00005 ABC transporter DW350_RS12820 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DW350_RS12825 PF13977 BetI-type transcriptional repressor, C-terminal DW350_RS12825 PF00440 Bacterial regulatory proteins, tetR family DW350_RS12830 PF00171 Aldehyde dehydrogenase family DW350_RS12835 PF05199 GMC oxidoreductase DW350_RS12835 PF00732 GMC oxidoreductase DW350_RS12845 PF08502 LeuA allosteric (dimerisation) domain DW350_RS12845 PF00682 HMGL-like DW350_RS12850 PF00330 Aconitase family (aconitate hydratase) DW350_RS12855 PF00694 Aconitase C-terminal domain DW350_RS12860 PF00180 Isocitrate/isopropylmalate dehydrogenase DW350_RS12880 PF00665 Integrase core domain DW350_RS12880 PF13276 HTH-like domain DW350_RS12880 PF13333 Integrase core domain DW350_RS12885 PF01527 Transposase DW350_RS12905 PF14693 Ribosomal protein TL5, C-terminal domain DW350_RS12905 PF01386 Ribosomal L25p family DW350_RS12910 PF01195 Peptidyl-tRNA hydrolase DW350_RS12915 PF01926 50S ribosome-binding GTPase DW350_RS12915 PF06071 Protein of unknown function (DUF933) DW350_RS12940 PF00593 TonB dependent receptor DW350_RS12940 PF07715 TonB-dependent Receptor Plug Domain DW350_RS12950 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus DW350_RS12950 PF00561 alpha/beta hydrolase fold DW350_RS12955 PF01515 Phosphate acetyl/butaryl transferase DW350_RS12960 PF00871 Acetokinase family DW350_RS12970 PF03352 Methyladenine glycosylase DW350_RS12975 PF00293 NUDIX domain DW350_RS12980 PF01047 MarR family DW350_RS12985 PF02441 Flavoprotein DW350_RS12990 PF13419 Haloacid dehalogenase-like hydrolase DW350_RS12995 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS13005 PF07690 Major Facilitator Superfamily DW350_RS13015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS13015 PF03466 LysR substrate binding domain DW350_RS13020 PF12729 Four helix bundle sensory module for signal transduction DW350_RS13020 PF00672 HAMP domain DW350_RS13020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW350_RS13025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW350_RS13025 PF16591 Helical bimodular sensor domain DW350_RS13025 PF00672 HAMP domain DW350_RS13030 PF01232 Mannitol dehydrogenase Rossmann domain DW350_RS13030 PF08125 Mannitol dehydrogenase C-terminal domain DW350_RS13035 PF02614 Glucuronate isomerase DW350_RS13075 PF01494 FAD binding domain DW350_RS13085 PF01938 TRAM domain DW350_RS13085 PF00919 Uncharacterized protein family UPF0004 DW350_RS13085 PF04055 Radical SAM superfamily DW350_RS13090 PF02562 PhoH-like protein DW350_RS13095 PF02130 Uncharacterized protein family UPF0054 DW350_RS13100 PF00571 CBS domain DW350_RS13100 PF03471 Transporter associated domain DW350_RS13105 PF00795 Carbon-nitrogen hydrolase DW350_RS13115 PF08264 Anticodon-binding domain of tRNA DW350_RS13115 PF13603 Leucyl-tRNA synthetase, Domain 2 DW350_RS13115 PF00133 tRNA synthetases class I (I, L, M and V) DW350_RS13120 PF04390 Lipopolysaccharide-assembly DW350_RS13125 PF06144 DNA polymerase III, delta subunit DW350_RS13125 PF14840 Processivity clamp loader gamma complex DNA pol III C-term DW350_RS13130 PF01467 Cytidylyltransferase-like DW350_RS13140 PF02590 Predicted SPOUT methyltransferase DW350_RS13145 PF00905 Penicillin binding protein transpeptidase domain DW350_RS13145 PF03717 Penicillin-binding Protein dimerisation domain DW350_RS13150 PF01098 Cell cycle protein DW350_RS13155 PF13406 Transglycosylase SLT domain DW350_RS13160 PF03330 Lytic transglycolase DW350_RS13160 PF05036 Sporulation related domain DW350_RS13165 PF07943 Penicillin-binding protein 5, C-terminal domain DW350_RS13165 PF00768 D-alanyl-D-alanine carboxypeptidase DW350_RS13170 PF04359 Protein of unknown function (DUF493) DW350_RS13175 PF03099 Biotin/lipoate A/B protein ligase family DW350_RS13180 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DW350_RS13180 PF04055 Radical SAM superfamily DW350_RS13195 PF14684 Tricorn protease C1 domain DW350_RS13195 PF03572 Peptidase family S41 DW350_RS13195 PF07676 WD40-like Beta Propeller Repeat DW350_RS13195 PF14685 Tricorn protease PDZ domain DW350_RS13200 PF00563 EAL domain DW350_RS13200 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS13200 PF03707 Bacterial signalling protein N terminal repeat DW350_RS13205 PF07719 Tetratricopeptide repeat DW350_RS13205 PF13181 Tetratricopeptide repeat DW350_RS13210 PF03725 3' exoribonuclease family, domain 2 DW350_RS13210 PF00575 S1 RNA binding domain DW350_RS13210 PF00013 KH domain DW350_RS13210 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DW350_RS13210 PF01138 3' exoribonuclease family, domain 1 DW350_RS13215 PF00312 Ribosomal protein S15 DW350_RS13220 PF01509 TruB family pseudouridylate synthase (N terminal domain) DW350_RS13220 PF09157 Pseudouridine synthase II TruB, C-terminal DW350_RS13220 PF16198 tRNA pseudouridylate synthase B C-terminal domain DW350_RS13225 PF02033 Ribosome-binding factor A DW350_RS13230 PF04760 Translation initiation factor IF-2, N-terminal region DW350_RS13230 PF08364 Bacterial translation initiation factor IF-2 associated region DW350_RS13230 PF11987 Translation-initiation factor 2 DW350_RS13230 PF00009 Elongation factor Tu GTP binding domain DW350_RS13235 PF13184 NusA-like KH domain DW350_RS13235 PF08529 NusA N-terminal domain DW350_RS13235 PF00575 S1 RNA binding domain DW350_RS13240 PF17384 RimP C-terminal SH3 domain DW350_RS13240 PF02576 RimP N-terminal domain DW350_RS13255 PF03840 Preprotein translocase SecG subunit DW350_RS13260 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DW350_RS13260 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DW350_RS13260 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DW350_RS13260 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DW350_RS13265 PF00809 Pterin binding enzyme DW350_RS13270 PF06480 FtsH Extracellular DW350_RS13270 PF17862 AAA+ lid domain DW350_RS13270 PF01434 Peptidase family M41 DW350_RS13270 PF00004 ATPase family associated with various cellular activities (AAA) DW350_RS13275 PF01728 FtsJ-like methyltransferase DW350_RS13280 PF01985 CRS1 / YhbY (CRM) domain DW350_RS13285 PF01272 Transcription elongation factor, GreA/GreB, C-term DW350_RS13285 PF03449 Transcription elongation factor, N-terminal DW350_RS13295 PF00691 OmpA family DW350_RS13295 PF13488 Glycine zipper DW350_RS13300 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus DW350_RS13300 PF00561 alpha/beta hydrolase fold DW350_RS13310 PF00106 short chain dehydrogenase DW350_RS13315 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DW350_RS13315 PF02142 MGS-like domain DW350_RS13315 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DW350_RS13320 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DW350_RS13320 PF00117 Glutamine amidotransferase class-I DW350_RS13325 PF05173 Dihydrodipicolinate reductase, C-terminus DW350_RS13325 PF01113 Dihydrodipicolinate reductase, N-terminus DW350_RS13330 PF00873 AcrB/AcrD/AcrF family DW350_RS13335 PF00529 HlyD membrane-fusion protein of T1SS DW350_RS13335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DW350_RS13340 PF03553 Na+/H+ antiporter family DW350_RS13345 PF03466 LysR substrate binding domain DW350_RS13345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS13350 PF00248 Aldo/keto reductase family DW350_RS13355 PF00563 EAL domain DW350_RS13355 PF00360 Phytochrome region DW350_RS13355 PF01590 GAF domain DW350_RS13355 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS13365 PF08279 HTH domain DW350_RS13365 PF13280 WYL domain DW350_RS13370 PF02611 CDP-diacylglycerol pyrophosphatase DW350_RS13375 PF13091 PLD-like domain DW350_RS13385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW350_RS13385 PF00672 HAMP domain DW350_RS13385 PF12729 Four helix bundle sensory module for signal transduction DW350_RS13390 PF13407 Periplasmic binding protein domain DW350_RS13395 PF00083 Sugar (and other) transporter DW350_RS13405 PF01435 Peptidase family M48 DW350_RS13410 PF00583 Acetyltransferase (GNAT) family DW350_RS13420 PF00684 DnaJ central domain DW350_RS13420 PF00226 DnaJ domain DW350_RS13420 PF01556 DnaJ C terminal domain DW350_RS13425 PF00012 Hsp70 protein DW350_RS13430 PF01025 GrpE DW350_RS13435 PF01513 ATP-NAD kinase DW350_RS13440 PF02463 RecF/RecN/SMC N terminal domain DW350_RS13445 PF04355 SmpA / OmlA family DW350_RS13450 PF03658 RnfH family Ubiquitin DW350_RS13455 PF03364 Polyketide cyclase / dehydrase and lipid transport DW350_RS13460 PF01668 SmpB protein DW350_RS13470 PF13677 Membrane MotB of proton-channel complex MotA/MotB DW350_RS13470 PF00691 OmpA family DW350_RS13475 PF01618 MotA/TolQ/ExbB proton channel family DW350_RS13480 PF04542 Sigma-70 region 2 DW350_RS13480 PF04545 Sigma-70, region 4 DW350_RS13500 PF02561 Flagellar protein FliS DW350_RS13505 PF07196 Flagellin hook IN motif DW350_RS13505 PF07195 Flagellar hook-associated protein 2 C-terminus DW350_RS13505 PF02465 Flagellar hook-associated protein 2 N-terminus DW350_RS13510 PF00700 Bacterial flagellin C-terminal helical region DW350_RS13510 PF00669 Bacterial flagellin N-terminal helical region DW350_RS13520 PF00669 Bacterial flagellin N-terminal helical region DW350_RS13525 PF00460 Flagella basal body rod protein DW350_RS13525 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DW350_RS13530 PF10135 Rod binding protein DW350_RS13530 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DW350_RS13535 PF02119 Flagellar P-ring protein DW350_RS13540 PF02107 Flagellar L-ring protein DW350_RS13545 PF00460 Flagella basal body rod protein DW350_RS13545 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DW350_RS13550 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DW350_RS13550 PF00460 Flagella basal body rod protein DW350_RS13555 PF07559 Flagellar basal body protein FlaE DW350_RS13555 PF00460 Flagella basal body rod protein DW350_RS13555 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DW350_RS13560 PF13860 FlgD Ig-like domain DW350_RS13560 PF03963 Flagellar hook capping protein - N-terminal region DW350_RS13560 PF13861 FlgD Tudor-like domain DW350_RS13565 PF00460 Flagella basal body rod protein DW350_RS13565 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DW350_RS13570 PF00460 Flagella basal body rod protein DW350_RS13575 PF13144 Chaperone for flagella basal body P-ring formation DW350_RS13595 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DW350_RS13595 PF18269 T3SS EscN ATPase C-terminal domain DW350_RS13605 PF01706 FliG C-terminal domain DW350_RS13605 PF14842 FliG N-terminal domain DW350_RS13605 PF14841 FliG middle domain DW350_RS13610 PF01514 Secretory protein of YscJ/FliF family DW350_RS13610 PF08345 Flagellar M-ring protein C-terminal DW350_RS13615 PF02049 Flagellar hook-basal body complex protein FliE DW350_RS13620 PF00158 Sigma-54 interaction domain DW350_RS13620 PF02954 Bacterial regulatory protein, Fis family DW350_RS13620 PF00072 Response regulator receiver domain DW350_RS13630 PF00771 FHIPEP family DW350_RS13635 PF01312 FlhB HrpN YscU SpaS Family DW350_RS13640 PF01311 Bacterial export proteins, family 1 DW350_RS13645 PF01313 Bacterial export proteins, family 3 DW350_RS13650 PF00813 FliP family DW350_RS13655 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DW350_RS13660 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DW350_RS13675 PF01810 LysE type translocator DW350_RS13680 PF01699 Sodium/calcium exchanger protein DW350_RS13685 PF05552 Conserved TM helix DW350_RS13685 PF00924 Mechanosensitive ion channel DW350_RS13690 PF00672 HAMP domain DW350_RS13690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW350_RS13695 PF03734 L,D-transpeptidase catalytic domain DW350_RS13695 PF17969 L,D-transpeptidase C-terminal domain DW350_RS13695 PF01476 LysM domain DW350_RS13705 PF00689 Cation transporting ATPase, C-terminus DW350_RS13705 PF00690 Cation transporter/ATPase, N-terminus DW350_RS13710 PF07859 alpha/beta hydrolase fold DW350_RS13715 PF01679 Proteolipid membrane potential modulator DW350_RS13725 PF02492 CobW/HypB/UreG, nucleotide-binding domain DW350_RS13725 PF07683 Cobalamin synthesis protein cobW C-terminal domain DW350_RS13750 PF00486 Transcriptional regulatory protein, C terminal DW350_RS13750 PF00072 Response regulator receiver domain DW350_RS13755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW350_RS13755 PF13493 Domain of unknown function (DUF4118) DW350_RS13755 PF00512 His Kinase A (phospho-acceptor) domain DW350_RS13755 PF13492 GAF domain DW350_RS13755 PF02702 Osmosensitive K+ channel His kinase sensor domain DW350_RS13760 PF02669 K+-transporting ATPase, c chain DW350_RS13770 PF03814 Potassium-transporting ATPase A subunit DW350_RS13775 PF00155 Aminotransferase class I and II DW350_RS13785 PF14552 Tautomerase enzyme DW350_RS13790 PF00248 Aldo/keto reductase family DW350_RS13805 PF03466 LysR substrate binding domain DW350_RS13805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS13810 PF07690 Major Facilitator Superfamily DW350_RS13815 PF03692 Putative zinc- or iron-chelating domain DW350_RS13825 PF01063 Amino-transferase class IV DW350_RS13830 PF00563 EAL domain DW350_RS13830 PF03707 Bacterial signalling protein N terminal repeat DW350_RS13830 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS13840 PF02954 Bacterial regulatory protein, Fis family DW350_RS13840 PF00072 Response regulator receiver domain DW350_RS13845 PF00512 His Kinase A (phospho-acceptor) domain DW350_RS13845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW350_RS13845 PF00672 HAMP domain DW350_RS13855 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS13855 PF00563 EAL domain DW350_RS13855 PF08448 PAS fold DW350_RS13860 PF01804 Penicillin amidase DW350_RS13865 PF18081 Fanconi anemia-associated nuclease SAP domain DW350_RS13865 PF08774 VRR-NUC domain DW350_RS13870 PF09618 CRISPR-associated protein (Cas_Csy4) DW350_RS13875 PF09615 CRISPR-associated protein (Cas_Csy3) DW350_RS13880 PF09614 CRISPR-associated protein (Cas_Csy2) DW350_RS13885 PF09611 CRISPR-associated protein (Cas_Csy1) DW350_RS13890 PF18019 HD domain DW350_RS13895 PF01867 CRISPR associated protein Cas1 DW350_RS13910 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DW350_RS13910 PF00034 Cytochrome c DW350_RS13915 PF05199 GMC oxidoreductase DW350_RS13915 PF00732 GMC oxidoreductase DW350_RS13925 PF01321 Creatinase/Prolidase N-terminal domain DW350_RS13925 PF00557 Metallopeptidase family M24 DW350_RS13945 PF07715 TonB-dependent Receptor Plug Domain DW350_RS13945 PF00593 TonB dependent receptor DW350_RS13955 PF02837 Glycosyl hydrolases family 2, sugar binding domain DW350_RS13955 PF00703 Glycosyl hydrolases family 2 DW350_RS13955 PF16353 Domain of unknown function(DUF4981) DW350_RS13955 PF02929 Beta galactosidase small chain DW350_RS13955 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DW350_RS13960 PF00171 Aldehyde dehydrogenase family DW350_RS13965 PF05544 Proline racemase DW350_RS13970 PF00701 Dihydrodipicolinate synthetase family DW350_RS13980 PF00392 Bacterial regulatory proteins, gntR family DW350_RS13985 PF03553 Na+/H+ antiporter family DW350_RS13990 PF13026 Protein of unknown function (DUF3887) DW350_RS13990 PF12146 Serine aminopeptidase, S33 DW350_RS13995 PF01245 Ribosomal protein L19 DW350_RS14000 PF01746 tRNA (Guanine-1)-methyltransferase DW350_RS14005 PF01782 RimM N-terminal domain DW350_RS14005 PF05239 PRC-barrel domain DW350_RS14010 PF00886 Ribosomal protein S16 DW350_RS14015 PF02978 Signal peptide binding domain DW350_RS14015 PF02881 SRP54-type protein, helical bundle domain DW350_RS14015 PF00448 SRP54-type protein, GTPase domain DW350_RS14020 PF01578 Cytochrome C assembly protein DW350_RS14025 PF01595 Cyclin M transmembrane N-terminal domain DW350_RS14025 PF03471 Transporter associated domain DW350_RS14025 PF00571 CBS domain DW350_RS14035 PF01053 Cys/Met metabolism PLP-dependent enzyme DW350_RS14040 PF04262 Glutamate-cysteine ligase DW350_RS14045 PF00375 Sodium:dicarboxylate symporter family DW350_RS14070 PF02599 Global regulator protein family DW350_RS14075 PF13840 ACT domain DW350_RS14075 PF01842 ACT domain DW350_RS14075 PF00696 Amino acid kinase family DW350_RS14080 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DW350_RS14080 PF01411 tRNA synthetases class II (A) DW350_RS14080 PF02272 DHHA1 domain DW350_RS14090 PF00154 recA bacterial DNA recombination protein DW350_RS14095 PF02464 Competence-damaged protein DW350_RS14100 PF00488 MutS domain V DW350_RS14100 PF05190 MutS family domain IV DW350_RS14100 PF01624 MutS domain I DW350_RS14100 PF05188 MutS domain II DW350_RS14100 PF05192 MutS domain III DW350_RS14105 PF01266 FAD dependent oxidoreductase DW350_RS14110 PF00171 Aldehyde dehydrogenase family DW350_RS14115 PF00202 Aminotransferase class-III DW350_RS14120 PF01266 FAD dependent oxidoreductase DW350_RS14125 PF01266 FAD dependent oxidoreductase DW350_RS14130 PF00120 Glutamine synthetase, catalytic domain DW350_RS14135 PF00120 Glutamine synthetase, catalytic domain DW350_RS14140 PF00202 Aminotransferase class-III DW350_RS14150 PF08402 TOBE domain DW350_RS14150 PF00005 ABC transporter DW350_RS14155 PF00528 Binding-protein-dependent transport system inner membrane component DW350_RS14160 PF00528 Binding-protein-dependent transport system inner membrane component DW350_RS14165 PF00117 Glutamine amidotransferase class-I DW350_RS14165 PF00958 GMP synthase C terminal domain DW350_RS14165 PF02540 NAD synthase DW350_RS14170 PF01381 Helix-turn-helix DW350_RS14170 PF07883 Cupin domain DW350_RS14175 PF04545 Sigma-70, region 4 DW350_RS14175 PF04542 Sigma-70 region 2 DW350_RS14175 PF00140 Sigma-70 factor, region 1.2 DW350_RS14175 PF04539 Sigma-70 region 3 DW350_RS14180 PF01476 LysM domain DW350_RS14180 PF01551 Peptidase family M23 DW350_RS14185 PF09335 SNARE associated Golgi protein DW350_RS14195 PF01975 Survival protein SurE DW350_RS14200 PF01142 tRNA pseudouridine synthase D (TruD) DW350_RS14205 PF02542 YgbB family DW350_RS14210 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DW350_RS14215 PF04977 Septum formation initiator DW350_RS14220 PF02798 Glutathione S-transferase, N-terminal domain DW350_RS14230 PF03952 Enolase, N-terminal domain DW350_RS14230 PF00113 Enolase, C-terminal TIM barrel domain DW350_RS14235 PF00117 Glutamine amidotransferase class-I DW350_RS14235 PF06418 CTP synthase N-terminus DW350_RS14240 PF03819 MazG nucleotide pyrophosphohydrolase domain DW350_RS14245 PF13291 ACT domain DW350_RS14245 PF04607 Region found in RelA / SpoT proteins DW350_RS14245 PF02824 TGS domain DW350_RS14250 PF01938 TRAM domain DW350_RS14250 PF05958 tRNA (Uracil-5-)-methyltransferase DW350_RS14255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW350_RS14255 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DW350_RS14255 PF00512 His Kinase A (phospho-acceptor) domain DW350_RS14255 PF01627 Hpt domain DW350_RS14255 PF00072 Response regulator receiver domain DW350_RS14255 PF00672 HAMP domain DW350_RS14265 PF02673 Bacitracin resistance protein BacA DW350_RS14270 PF12729 Four helix bundle sensory module for signal transduction DW350_RS14270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW350_RS14270 PF00672 HAMP domain DW350_RS14280 PF01648 4'-phosphopantetheinyl transferase superfamily DW350_RS14285 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DW350_RS14290 PF02565 Recombination protein O C terminal DW350_RS14290 PF11967 Recombination protein O N terminal DW350_RS14295 PF07650 KH domain DW350_RS14295 PF01926 50S ribosome-binding GTPase DW350_RS14300 PF14622 Ribonuclease-III-like DW350_RS14300 PF00035 Double-stranded RNA binding motif DW350_RS14305 PF10502 Signal peptidase, peptidase S26 DW350_RS14310 PF10502 Signal peptidase, peptidase S26 DW350_RS14315 PF06421 GTP-binding protein LepA C-terminus DW350_RS14315 PF03144 Elongation factor Tu domain 2 DW350_RS14315 PF00009 Elongation factor Tu GTP binding domain DW350_RS14315 PF00679 Elongation factor G C-terminus DW350_RS14325 PF17188 MucB/RseB C-terminal domain DW350_RS14325 PF03888 MucB/RseB N-terminal domain DW350_RS14330 PF03872 Anti sigma-E protein RseA, N-terminal domain DW350_RS14330 PF03873 Anti sigma-E protein RseA, C-terminal domain DW350_RS14335 PF04542 Sigma-70 region 2 DW350_RS14335 PF08281 Sigma-70, region 4 DW350_RS14340 PF02910 Fumarate reductase flavoprotein C-term DW350_RS14340 PF00890 FAD binding domain DW350_RS14350 PF03937 Flavinator of succinate dehydrogenase DW350_RS14355 PF01571 Aminomethyltransferase folate-binding domain DW350_RS14365 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DW350_RS14375 PF07992 Pyridine nucleotide-disulphide oxidoreductase DW350_RS14380 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS14380 PF00563 EAL domain DW350_RS14380 PF03707 Bacterial signalling protein N terminal repeat DW350_RS14390 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS14390 PF03707 Bacterial signalling protein N terminal repeat DW350_RS14390 PF00563 EAL domain DW350_RS14405 PF00005 ABC transporter DW350_RS14405 PF12848 ABC transporter DW350_RS14415 PF00392 Bacterial regulatory proteins, gntR family DW350_RS14420 PF00005 ABC transporter DW350_RS14440 PF00136 DNA polymerase family B DW350_RS14440 PF03104 DNA polymerase family B, exonuclease domain DW350_RS14445 PF01965 DJ-1/PfpI family DW350_RS14450 PF00672 HAMP domain DW350_RS14450 PF16591 Helical bimodular sensor domain DW350_RS14450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW350_RS14455 PF00005 ABC transporter DW350_RS14470 PF00563 EAL domain DW350_RS14470 PF05231 MASE1 DW350_RS14475 PF00881 Nitroreductase family DW350_RS14495 PF00561 alpha/beta hydrolase fold DW350_RS14500 PF02743 Cache domain DW350_RS14500 PF00672 HAMP domain DW350_RS14500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW350_RS14510 PF04909 Amidohydrolase DW350_RS14515 PF00392 Bacterial regulatory proteins, gntR family DW350_RS14515 PF07702 UTRA domain DW350_RS14520 PF07694 5TMR of 5TMR-LYT DW350_RS14520 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS14550 PF01527 Transposase DW350_RS14555 PF13276 HTH-like domain DW350_RS14555 PF13333 Integrase core domain DW350_RS14555 PF00665 Integrase core domain DW350_RS14560 PF13276 HTH-like domain DW350_RS14560 PF00665 Integrase core domain DW350_RS14560 PF13333 Integrase core domain DW350_RS14565 PF00665 Integrase core domain DW350_RS14565 PF13333 Integrase core domain DW350_RS14565 PF13276 HTH-like domain DW350_RS14580 PF01548 Transposase DW350_RS14580 PF02371 Transposase IS116/IS110/IS902 family DW350_RS14585 PF13737 Transposase DDE domain DW350_RS14595 PF01625 Peptide methionine sulfoxide reductase DW350_RS14610 PF01336 OB-fold nucleic acid binding domain DW350_RS14610 PF00152 tRNA synthetases class II (D, K and N) DW350_RS14620 PF02272 DHHA1 domain DW350_RS14620 PF17768 RecJ OB domain DW350_RS14620 PF01368 DHH family DW350_RS14625 PF10411 Disulfide bond isomerase protein N-terminus DW350_RS14625 PF13098 Thioredoxin-like domain DW350_RS14630 PF00589 Phage integrase family DW350_RS14630 PF02899 Phage integrase, N-terminal SAM-like domain DW350_RS14635 PF00258 Flavodoxin DW350_RS14640 PF05525 Branched-chain amino acid transport protein DW350_RS14645 PF05175 Methyltransferase small domain DW350_RS14650 PF00270 DEAD/DEAH box helicase DW350_RS14650 PF00271 Helicase conserved C-terminal domain DW350_RS14655 PF03692 Putative zinc- or iron-chelating domain DW350_RS14685 PF03883 Peroxide stress protein YaaA DW350_RS14690 PF01235 Sodium:alanine symporter family DW350_RS14695 PF04381 Putative exonuclease, RdgC DW350_RS14705 PF16325 Peptidase family U32 C-terminal domain DW350_RS14705 PF01136 Peptidase family U32 DW350_RS14710 PF00037 4Fe-4S binding domain DW350_RS14725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW350_RS14725 PF08447 PAS fold DW350_RS14735 PF00156 Phosphoribosyl transferase domain DW350_RS14740 PF00860 Permease family DW350_RS14745 PF00005 ABC transporter DW350_RS14750 PF00528 Binding-protein-dependent transport system inner membrane component DW350_RS14755 PF00528 Binding-protein-dependent transport system inner membrane component DW350_RS14760 PF12849 PBP superfamily domain DW350_RS14765 PF02789 Cytosol aminopeptidase family, N-terminal domain DW350_RS14765 PF00883 Cytosol aminopeptidase family, catalytic domain DW350_RS14770 PF03929 PepSY-associated TM region DW350_RS14785 PF11798 IMS family HHH motif DW350_RS14785 PF00817 impB/mucB/samB family DW350_RS14785 PF11799 impB/mucB/samB family C-terminal domain DW350_RS14790 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DW350_RS14790 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DW350_RS14795 PF03502 Nucleoside-specific channel-forming protein, Tsx DW350_RS14820 PF08448 PAS fold DW350_RS14820 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS14825 PF00043 Glutathione S-transferase, C-terminal domain DW350_RS14825 PF02798 Glutathione S-transferase, N-terminal domain DW350_RS14830 PF00266 Aminotransferase class-V DW350_RS14835 PF02657 Fe-S metabolism associated domain DW350_RS14840 PF00892 EamA-like transporter family DW350_RS14845 PF00899 ThiF family DW350_RS14850 PF00108 Thiolase, N-terminal domain DW350_RS14850 PF02803 Thiolase, C-terminal domain DW350_RS14855 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS14855 PF00563 EAL domain DW350_RS14855 PF03707 Bacterial signalling protein N terminal repeat DW350_RS14860 PF11871 Domain of unknown function (DUF3391) DW350_RS14860 PF01966 HD domain DW350_RS14865 PF00171 Aldehyde dehydrogenase family DW350_RS14875 PF00072 Response regulator receiver domain DW350_RS14875 PF00486 Transcriptional regulatory protein, C terminal DW350_RS14880 PF00512 His Kinase A (phospho-acceptor) domain DW350_RS14880 PF00989 PAS fold DW350_RS14880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW350_RS14880 PF01627 Hpt domain DW350_RS14880 PF00072 Response regulator receiver domain DW350_RS14880 PF18415 Histidine kinase receptor ArcB trans-membrane domain DW350_RS14885 PF01493 GXGXG motif DW350_RS14885 PF01645 Conserved region in glutamate synthase DW350_RS14885 PF04898 Glutamate synthase central domain DW350_RS14885 PF00310 Glutamine amidotransferases class-II DW350_RS14890 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DW350_RS14890 PF07992 Pyridine nucleotide-disulphide oxidoreductase DW350_RS14895 PF01048 Phosphorylase superfamily DW350_RS14930 PF00128 Alpha amylase, catalytic domain DW350_RS14935 PF13632 Glycosyl transferase family group 2 DW350_RS14940 PF04349 Periplasmic glucan biosynthesis protein, MdoG DW350_RS14945 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DW350_RS14950 PF00082 Subtilase family DW350_RS14950 PF00082 Subtilase family DW350_RS14950 PF05922 Peptidase inhibitor I9 DW350_RS14950 PF05922 Peptidase inhibitor I9 DW350_RS14955 PF00579 tRNA synthetases class I (W and Y) DW350_RS14960 PF08525 Opacity-associated protein A N-terminal motif DW350_RS14960 PF01551 Peptidase family M23 DW350_RS14960 PF01476 LysM domain DW350_RS14965 PF03702 Anhydro-N-acetylmuramic acid kinase DW350_RS14985 PF00202 Aminotransferase class-III DW350_RS15000 PF03372 Endonuclease/Exonuclease/phosphatase family DW350_RS15010 PF01510 N-acetylmuramoyl-L-alanine amidase DW350_RS15035 PF01521 Iron-sulphur cluster biosynthesis DW350_RS15040 PF00654 Voltage gated chloride channel DW350_RS15045 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DW350_RS15045 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DW350_RS15050 PF00202 Aminotransferase class-III DW350_RS15060 PF03707 Bacterial signalling protein N terminal repeat DW350_RS15060 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS15060 PF00563 EAL domain DW350_RS15070 PF01047 MarR family DW350_RS15075 PF14814 Bifunctional transglycosylase second domain DW350_RS15075 PF00912 Transglycosylase DW350_RS15075 PF00905 Penicillin binding protein transpeptidase domain DW350_RS15080 PF02667 Short chain fatty acid transporter DW350_RS15085 PF00108 Thiolase, N-terminal domain DW350_RS15085 PF02803 Thiolase, C-terminal domain DW350_RS15090 PF01144 Coenzyme A transferase DW350_RS15095 PF01144 Coenzyme A transferase DW350_RS15100 PF01614 Bacterial transcriptional regulator DW350_RS15100 PF09339 IclR helix-turn-helix domain DW350_RS15105 PF00271 Helicase conserved C-terminal domain DW350_RS15105 PF00270 DEAD/DEAH box helicase DW350_RS15105 PF04408 Helicase associated domain (HA2) DW350_RS15105 PF08482 ATP-dependent helicase C-terminal DW350_RS15120 PF12404 Peptidase DW350_RS15120 PF00883 Cytosol aminopeptidase family, catalytic domain DW350_RS15125 PF03749 Sugar fermentation stimulation protein RE domain DW350_RS15125 PF17746 SfsA N-terminal OB domain DW350_RS15130 PF01258 Prokaryotic dksA/traR C4-type zinc finger DW350_RS15135 PF00749 tRNA synthetases class I (E and Q), catalytic domain DW350_RS15140 PF12627 Probable RNA and SrmB- binding site of polymerase A DW350_RS15140 PF12626 Polymerase A arginine-rich C-terminus DW350_RS15140 PF01743 Poly A polymerase head domain DW350_RS15145 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DW350_RS15150 PF02548 Ketopantoate hydroxymethyltransferase DW350_RS15155 PF02569 Pantoate-beta-alanine ligase DW350_RS15160 PF02261 Aspartate decarboxylase DW350_RS15170 PF01061 ABC-2 type transporter DW350_RS15175 PF00005 ABC transporter DW350_RS15180 PF00563 EAL domain DW350_RS15180 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS15180 PF03707 Bacterial signalling protein N terminal repeat DW350_RS15185 PF00484 Carbonic anhydrase DW350_RS15190 PF00156 Phosphoribosyl transferase domain DW350_RS15195 PF02441 Flavoprotein DW350_RS15200 PF01225 Mur ligase family, catalytic domain DW350_RS15200 PF02875 Mur ligase family, glutamate ligase domain DW350_RS15200 PF08245 Mur ligase middle domain DW350_RS15205 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain DW350_RS15210 PF00719 Inorganic pyrophosphatase DW350_RS15225 PF03738 Glutathionylspermidine synthase preATP-grasp DW350_RS15235 PF03994 Domain of Unknown Function (DUF350) DW350_RS15240 PF00111 2Fe-2S iron-sulfur cluster binding domain DW350_RS15250 PF00557 Metallopeptidase family M24 DW350_RS15250 PF01321 Creatinase/Prolidase N-terminal domain DW350_RS15250 PF00557 Metallopeptidase family M24 DW350_RS15250 PF01321 Creatinase/Prolidase N-terminal domain DW350_RS15260 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) DW350_RS15265 PF05951 Bacterial protein of unknown function (DUF882) DW350_RS15270 PF03734 L,D-transpeptidase catalytic domain DW350_RS15270 PF01471 Putative peptidoglycan binding domain DW350_RS15280 PF00459 Inositol monophosphatase family DW350_RS15290 PF00009 Elongation factor Tu GTP binding domain DW350_RS15295 PF01507 Phosphoadenosine phosphosulfate reductase family DW350_RS15300 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DW350_RS15300 PF14824 Sirohaem biosynthesis protein central DW350_RS15300 PF10414 Sirohaem synthase dimerisation region DW350_RS15305 PF01507 Phosphoadenosine phosphosulfate reductase family DW350_RS15310 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DW350_RS15310 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DW350_RS15315 PF00258 Flavodoxin DW350_RS15315 PF00175 Oxidoreductase NAD-binding domain DW350_RS15315 PF00667 FAD binding domain DW350_RS15345 PF07396 Phosphate-selective porin O and P DW350_RS15355 PF00378 Enoyl-CoA hydratase/isomerase DW350_RS15375 PF01207 Dihydrouridine synthase (Dus) DW350_RS15380 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DW350_RS15390 PF01590 GAF domain DW350_RS15390 PF02954 Bacterial regulatory protein, Fis family DW350_RS15390 PF00158 Sigma-54 interaction domain DW350_RS15405 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath DW350_RS15420 PF05947 Type VI secretion system, TssF DW350_RS15500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS15500 PF03466 LysR substrate binding domain DW350_RS15510 PF12706 Beta-lactamase superfamily domain DW350_RS15520 PF00557 Metallopeptidase family M24 DW350_RS15525 PF12894 Anaphase-promoting complex subunit 4 WD40 domain DW350_RS15525 PF00400 WD domain, G-beta repeat DW350_RS15555 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DW350_RS15560 PF00248 Aldo/keto reductase family DW350_RS15565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS15565 PF03466 LysR substrate binding domain DW350_RS15580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DW350_RS15580 PF00005 ABC transporter DW350_RS15585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DW350_RS15585 PF00005 ABC transporter DW350_RS15590 PF12911 N-terminal TM domain of oligopeptide transport permease C DW350_RS15590 PF00528 Binding-protein-dependent transport system inner membrane component DW350_RS15595 PF00528 Binding-protein-dependent transport system inner membrane component DW350_RS15600 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DW350_RS15615 PF01590 GAF domain DW350_RS15615 PF00563 EAL domain DW350_RS15615 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS15615 PF00360 Phytochrome region DW350_RS15620 PF00296 Luciferase-like monooxygenase DW350_RS15625 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DW350_RS15630 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DW350_RS15635 PF03480 Bacterial extracellular solute-binding protein, family 7 DW350_RS15640 PF01638 HxlR-like helix-turn-helix DW350_RS15645 PF01894 Uncharacterised protein family UPF0047 DW350_RS15655 PF00842 Alanine racemase, C-terminal domain DW350_RS15655 PF01168 Alanine racemase, N-terminal domain DW350_RS15660 PF00772 DnaB-like helicase N terminal domain DW350_RS15660 PF03796 DnaB-like helicase C terminal domain DW350_RS15665 PF02253 Phospholipase A1 DW350_RS15680 PF00753 Metallo-beta-lactamase superfamily DW350_RS15680 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DW350_RS15680 PF10996 Beta-Casp domain DW350_RS15685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS15685 PF03466 LysR substrate binding domain DW350_RS15700 PF03527 RHS protein DW350_RS15715 PF04717 Type VI secretion system, phage-baseplate injector DW350_RS15715 PF06715 Gp5 C-terminal repeat (3 copies) DW350_RS15725 PF17871 AAA lid domain DW350_RS15725 PF07724 AAA domain (Cdc48 subfamily) DW350_RS15725 PF00004 ATPase family associated with various cellular activities (AAA) DW350_RS15725 PF10431 C-terminal, D2-small domain, of ClpB protein DW350_RS15735 PF05947 Type VI secretion system, TssF DW350_RS15750 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath DW350_RS15755 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath DW350_RS15760 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 DW350_RS15765 PF06812 ImpA, N-terminal, type VI secretion system DW350_RS15780 PF06761 Intracellular multiplication and human macrophage-killing DW350_RS15780 PF14331 ImcF-related N-terminal domain DW350_RS15780 PF06744 Type VI secretion protein IcmF C-terminal DW350_RS15785 PF13677 Membrane MotB of proton-channel complex MotA/MotB DW350_RS15785 PF00691 OmpA family DW350_RS15790 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE DW350_RS15805 PF00069 Protein kinase domain DW350_RS15805 PF03793 PASTA domain DW350_RS15815 PF01808 AICARFT/IMPCHase bienzyme DW350_RS15815 PF02142 MGS-like domain DW350_RS15820 PF02844 Phosphoribosylglycinamide synthetase, N domain DW350_RS15820 PF02843 Phosphoribosylglycinamide synthetase, C domain DW350_RS15820 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DW350_RS15830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW350_RS15830 PF00672 HAMP domain DW350_RS15840 PF05985 Ethanolamine ammonia-lyase light chain (EutC) DW350_RS15845 PF06751 Ethanolamine ammonia lyase large subunit (EutB) DW350_RS15850 PF08240 Alcohol dehydrogenase GroES-like domain DW350_RS15850 PF00107 Zinc-binding dehydrogenase DW350_RS15855 PF01709 Transcriptional regulator DW350_RS15860 PF03280 Proteobacterial lipase chaperone protein DW350_RS15865 PF00561 alpha/beta hydrolase fold DW350_RS15875 PF17946 RecC C-terminal domain DW350_RS15880 PF12705 PD-(D/E)XK nuclease superfamily DW350_RS15880 PF00580 UvrD/REP helicase N-terminal domain DW350_RS15880 PF13361 UvrD-like helicase C-terminal domain DW350_RS15925 PF08546 Ketopantoate reductase PanE/ApbA C terminal DW350_RS15925 PF02558 Ketopantoate reductase PanE/ApbA DW350_RS15935 PF03390 2-hydroxycarboxylate transporter family DW350_RS15950 PF17151 Periplasmic sensor domain DW350_RS15950 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS15955 PF01863 Protein of unknown function DUF45 DW350_RS15965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW350_RS15965 PF08447 PAS fold DW350_RS15965 PF13426 PAS domain DW350_RS15990 PF00270 DEAD/DEAH box helicase DW350_RS15990 PF00271 Helicase conserved C-terminal domain DW350_RS15990 PF03880 DbpA RNA binding domain DW350_RS15995 PF00271 Helicase conserved C-terminal domain DW350_RS15995 PF00270 DEAD/DEAH box helicase DW350_RS16000 PF08534 Redoxin DW350_RS16005 PF13476 AAA domain DW350_RS16010 PF12320 Type 5 capsule protein repressor C-terminal domain DW350_RS16010 PF00149 Calcineurin-like phosphoesterase DW350_RS16015 PF12792 CSS motif domain associated with EAL DW350_RS16015 PF00563 EAL domain DW350_RS16025 PF00072 Response regulator receiver domain DW350_RS16035 PF00106 short chain dehydrogenase DW350_RS16045 PF00756 Putative esterase DW350_RS16050 PF08240 Alcohol dehydrogenase GroES-like domain DW350_RS16050 PF00107 Zinc-binding dehydrogenase DW350_RS16055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS16055 PF03466 LysR substrate binding domain DW350_RS16060 PF04231 Endonuclease I DW350_RS16065 PF04452 RNA methyltransferase DW350_RS16070 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DW350_RS16070 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DW350_RS16075 PF02622 Uncharacterized ACR, COG1678 DW350_RS16080 PF03652 Holliday junction resolvase DW350_RS16085 PF00437 Type II/IV secretion system protein DW350_RS16090 PF00437 Type II/IV secretion system protein DW350_RS16095 PF01168 Alanine racemase, N-terminal domain DW350_RS16100 PF14748 Pyrroline-5-carboxylate reductase dimerisation DW350_RS16100 PF03807 NADP oxidoreductase coenzyme F420-dependent DW350_RS16105 PF02325 YGGT family DW350_RS16110 PF02594 Uncharacterised ACR, YggU family COG1872 DW350_RS16115 PF01725 Ham1 family DW350_RS16120 PF04055 Radical SAM superfamily DW350_RS16120 PF06969 HemN C-terminal domain DW350_RS16140 PF02390 Putative methyltransferase DW350_RS16145 PF00730 HhH-GPD superfamily base excision DNA repair protein DW350_RS16145 PF00633 Helix-hairpin-helix motif DW350_RS16145 PF14815 NUDIX domain DW350_RS16145 PF10576 Iron-sulfur binding domain of endonuclease III DW350_RS16150 PF04362 Bacterial Fe(2+) trafficking DW350_RS16175 PF01869 BadF/BadG/BcrA/BcrD ATPase family DW350_RS16180 PF03707 Bacterial signalling protein N terminal repeat DW350_RS16180 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS16180 PF00563 EAL domain DW350_RS16185 PF08468 Methyltransferase small domain N-terminal DW350_RS16185 PF05175 Methyltransferase small domain DW350_RS16205 PF06945 Protein of unknown function (DUF1289) DW350_RS16210 PF02562 PhoH-like protein DW350_RS16210 PF13638 PIN domain DW350_RS16215 PF12137 RNA polymerase recycling family C-terminal DW350_RS16215 PF00271 Helicase conserved C-terminal domain DW350_RS16215 PF00176 SNF2 family N-terminal domain DW350_RS16215 PF18337 RapA N-terminal Tudor like domain DW350_RS16215 PF18339 RapA N-terminal Tudor like domain 1 DW350_RS16225 PF00226 DnaJ domain DW350_RS16225 PF05099 Tellurite resistance protein TerB DW350_RS16230 PF00483 Nucleotidyl transferase DW350_RS16240 PF03968 OstA-like protein DW350_RS16240 PF04453 LPS transport system D DW350_RS16245 PF00639 PPIC-type PPIASE domain DW350_RS16245 PF09312 SurA N-terminal domain DW350_RS16250 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DW350_RS16255 PF00398 Ribosomal RNA adenine dimethylase DW350_RS16260 PF04379 ApaG domain DW350_RS16265 PF00149 Calcineurin-like phosphoesterase DW350_RS16270 PF00672 HAMP domain DW350_RS16270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW350_RS16285 PF00186 Dihydrofolate reductase DW350_RS16290 PF01018 GTP1/OBG DW350_RS16290 PF01926 50S ribosome-binding GTPase DW350_RS16295 PF01016 Ribosomal L27 protein DW350_RS16300 PF00829 Ribosomal prokaryotic L21 protein DW350_RS16305 PF00348 Polyprenyl synthetase DW350_RS16310 PF00056 lactate/malate dehydrogenase, NAD binding domain DW350_RS16310 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DW350_RS16315 PF00497 Bacterial extracellular solute-binding proteins, family 3 DW350_RS16320 PF02863 Arginine repressor, C-terminal domain DW350_RS16320 PF01316 Arginine repressor, DNA binding domain DW350_RS16325 PF00909 Ammonium Transporter Family DW350_RS16330 PF00543 Nitrogen regulatory protein P-II DW350_RS16345 PF06434 Aconitate hydratase 2 N-terminus DW350_RS16345 PF00330 Aconitase family (aconitate hydratase) DW350_RS16345 PF11791 Aconitate B N-terminal domain DW350_RS16355 PF05649 Peptidase family M13 DW350_RS16355 PF01431 Peptidase family M13 DW350_RS16360 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS16360 PF00563 EAL domain DW350_RS16360 PF03707 Bacterial signalling protein N terminal repeat DW350_RS16365 PF04393 Protein of unknown function (DUF535) DW350_RS16370 PF00731 AIR carboxylase DW350_RS16375 PF02222 ATP-grasp domain DW350_RS16375 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DW350_RS16380 PF07992 Pyridine nucleotide-disulphide oxidoreductase DW350_RS16380 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DW350_RS16385 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DW350_RS16385 PF02817 e3 binding domain DW350_RS16385 PF00364 Biotin-requiring enzyme DW350_RS16390 PF17831 Pyruvate dehydrogenase E1 component middle domain DW350_RS16390 PF00456 Transketolase, thiamine diphosphate binding domain DW350_RS16395 PF00392 Bacterial regulatory proteins, gntR family DW350_RS16395 PF07729 FCD domain DW350_RS16405 PF01510 N-acetylmuramoyl-L-alanine amidase DW350_RS16410 PF03884 DNA gyrase inhibitor YacG DW350_RS16415 PF07072 Cell division protein DW350_RS16420 PF01121 Dephospho-CoA kinase DW350_RS16425 PF01478 Type IV leader peptidase family DW350_RS16425 PF06750 Bacterial Peptidase A24 N-terminal domain DW350_RS16430 PF00482 Type II secretion system (T2SS), protein F DW350_RS16435 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DW350_RS16435 PF00437 Type II/IV secretion system protein DW350_RS16440 PF07963 Prokaryotic N-terminal methylation motif DW350_RS16440 PF00114 Pilin (bacterial filament) DW350_RS16445 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DW350_RS16445 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DW350_RS16450 PF00582 Universal stress protein family DW350_RS16455 PF00916 Sulfate permease family DW350_RS16455 PF01740 STAS domain DW350_RS16460 PF01292 Prokaryotic cytochrome b561 DW350_RS16465 PF00085 Thioredoxin DW350_RS16470 PF00293 NUDIX domain DW350_RS16475 PF02810 SEC-C motif DW350_RS16475 PF07517 SecA DEAD-like domain DW350_RS16475 PF07516 SecA Wing and Scaffold domain DW350_RS16475 PF01043 SecA preprotein cross-linking domain DW350_RS16485 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DW350_RS16490 PF12327 FtsZ family, C-terminal domain DW350_RS16490 PF00091 Tubulin/FtsZ family, GTPase domain DW350_RS16495 PF02491 SHS2 domain inserted in FTSA DW350_RS16500 PF08478 POTRA domain, FtsQ-type DW350_RS16500 PF03799 Cell division protein FtsQ DW350_RS16505 PF01820 D-ala D-ala ligase N-terminus DW350_RS16505 PF07478 D-ala D-ala ligase C-terminus DW350_RS16510 PF01225 Mur ligase family, catalytic domain DW350_RS16510 PF02875 Mur ligase family, glutamate ligase domain DW350_RS16510 PF08245 Mur ligase middle domain DW350_RS16515 PF03033 Glycosyltransferase family 28 N-terminal domain DW350_RS16515 PF04101 Glycosyltransferase family 28 C-terminal domain DW350_RS16520 PF01098 Cell cycle protein DW350_RS16525 PF08245 Mur ligase middle domain DW350_RS16525 PF02875 Mur ligase family, glutamate ligase domain DW350_RS16530 PF00953 Glycosyl transferase family 4 DW350_RS16530 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DW350_RS16535 PF08245 Mur ligase middle domain DW350_RS16535 PF02875 Mur ligase family, glutamate ligase domain DW350_RS16535 PF01225 Mur ligase family, catalytic domain DW350_RS16540 PF01225 Mur ligase family, catalytic domain DW350_RS16540 PF08245 Mur ligase middle domain DW350_RS16540 PF02875 Mur ligase family, glutamate ligase domain DW350_RS16545 PF00905 Penicillin binding protein transpeptidase domain DW350_RS16545 PF03717 Penicillin-binding Protein dimerisation domain DW350_RS16550 PF04999 Cell division protein FtsL DW350_RS16555 PF01795 MraW methylase family DW350_RS16560 PF02381 MraZ protein, putative antitoxin-like DW350_RS16570 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DW350_RS16575 PF04348 LppC putative lipoprotein DW350_RS16580 PF02021 Uncharacterised protein family UPF0102 DW350_RS16585 PF13580 SIS domain DW350_RS16590 PF04972 BON domain DW350_RS16595 PF04386 Stringent starvation protein B DW350_RS16600 PF02798 Glutathione S-transferase, N-terminal domain DW350_RS16600 PF00043 Glutathione S-transferase, C-terminal domain DW350_RS16605 PF02167 Cytochrome C1 family DW350_RS16610 PF00032 Cytochrome b(C-terminal)/b6/petD DW350_RS16610 PF00033 Cytochrome b/b6/petB DW350_RS16615 PF00355 Rieske [2Fe-2S] domain DW350_RS16615 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal DW350_RS16620 PF00380 Ribosomal protein S9/S16 DW350_RS16625 PF00572 Ribosomal protein L13 DW350_RS16630 PF03969 AFG1-like ATPase DW350_RS16640 PF13180 PDZ domain DW350_RS16640 PF00595 PDZ domain DW350_RS16645 PF13180 PDZ domain DW350_RS16650 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DW350_RS16655 PF01722 BolA-like protein DW350_RS16665 PF05494 MlaC protein DW350_RS16670 PF02470 MlaD protein DW350_RS16675 PF02405 Permease MlaE DW350_RS16680 PF00005 ABC transporter DW350_RS16685 PF00571 CBS domain DW350_RS16685 PF01380 SIS domain DW350_RS16705 PF00005 ABC transporter DW350_RS16705 PF12399 Branched-chain amino acid ATP-binding cassette transporter DW350_RS16710 PF00309 Sigma-54 factor, Activator interacting domain (AID) DW350_RS16710 PF04963 Sigma-54 factor, core binding domain DW350_RS16710 PF04552 Sigma-54, DNA binding domain DW350_RS16715 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DW350_RS16720 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DW350_RS16725 PF03668 P-loop ATPase protein family DW350_RS16730 PF00381 PTS HPr component phosphorylation site DW350_RS16735 PF01769 Divalent cation transporter DW350_RS16735 PF00571 CBS domain DW350_RS16735 PF03448 MgtE intracellular N domain DW350_RS16740 PF01523 Putative modulator of DNA gyrase DW350_RS16745 PF04751 Protein of unknown function (DUF615) DW350_RS16760 PF12704 MacB-like periplasmic core domain DW350_RS16760 PF02687 FtsX-like permease family DW350_RS16760 PF00005 ABC transporter DW350_RS16770 PF02447 GntP family permease DW350_RS16775 PF01523 Putative modulator of DNA gyrase DW350_RS16780 PF00795 Carbon-nitrogen hydrolase DW350_RS16785 PF13116 Protein of unknown function DW350_RS16785 PF13502 AsmA-like C-terminal region DW350_RS16790 PF00575 S1 RNA binding domain DW350_RS16790 PF10150 Ribonuclease E/G family DW350_RS16795 PF02545 Maf-like protein DW350_RS16800 PF04093 rod shape-determining protein MreD DW350_RS16805 PF04085 rod shape-determining protein MreC DW350_RS16840 PF07963 Prokaryotic N-terminal methylation motif DW350_RS16845 PF07963 Prokaryotic N-terminal methylation motif DW350_RS16855 PF00482 Type II secretion system (T2SS), protein F DW350_RS16860 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DW350_RS16860 PF00437 Type II/IV secretion system protein DW350_RS16870 PF01471 Putative peptidoglycan binding domain DW350_RS16870 PF13401 AAA domain DW350_RS16875 PF03958 Bacterial type II/III secretion system short domain DW350_RS16875 PF00263 Bacterial type II and III secretion system protein DW350_RS16905 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS16905 PF00563 EAL domain DW350_RS16905 PF17157 Gammaproteobacterial periplasmic sensor domain DW350_RS16910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS16910 PF03466 LysR substrate binding domain DW350_RS16915 PF00529 HlyD membrane-fusion protein of T1SS DW350_RS16915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DW350_RS16930 PF02321 Outer membrane efflux protein DW350_RS16940 PF00436 Single-strand binding protein family DW350_RS16945 PF07690 Major Facilitator Superfamily DW350_RS16950 PF17760 UvrA interaction domain DW350_RS16950 PF00005 ABC transporter DW350_RS16950 PF17755 UvrA DNA-binding domain DW350_RS16980 PF13520 Amino acid permease DW350_RS16985 PF01037 Lrp/AsnC ligand binding domain DW350_RS17010 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS17035 PF02219 Methylenetetrahydrofolate reductase DW350_RS17040 PF13360 PQQ-like domain DW350_RS17045 PF01717 Cobalamin-independent synthase, Catalytic domain DW350_RS17045 PF08267 Cobalamin-independent synthase, N-terminal domain DW350_RS17050 PF00742 Homoserine dehydrogenase DW350_RS17050 PF00696 Amino acid kinase family DW350_RS17050 PF03447 Homoserine dehydrogenase, NAD binding domain DW350_RS17055 PF01053 Cys/Met metabolism PLP-dependent enzyme DW350_RS17060 PF01340 Met Apo-repressor, MetJ DW350_RS17075 PF00390 Malic enzyme, N-terminal domain DW350_RS17075 PF03949 Malic enzyme, NAD binding domain DW350_RS17080 PF01197 Ribosomal protein L31 DW350_RS17085 PF00270 DEAD/DEAH box helicase DW350_RS17085 PF00271 Helicase conserved C-terminal domain DW350_RS17085 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DW350_RS17085 PF18074 Primosomal protein N C-terminal domain DW350_RS17085 PF17764 3′ DNA-binding domain (3′BD) DW350_RS17095 PF00227 Proteasome subunit DW350_RS17100 PF07724 AAA domain (Cdc48 subfamily) DW350_RS17100 PF10431 C-terminal, D2-small domain, of ClpB protein DW350_RS17100 PF00004 ATPase family associated with various cellular activities (AAA) DW350_RS17105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW350_RS17105 PF00672 HAMP domain DW350_RS17120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS17120 PF03466 LysR substrate binding domain DW350_RS17130 PF01569 PAP2 superfamily DW350_RS17140 PF03737 Aldolase/RraA DW350_RS17150 PF07971 Glycosyl hydrolase family 92 DW350_RS17150 PF17678 Glycosyl hydrolase family 92 N-terminal domain DW350_RS17185 PF05275 Copper resistance protein B precursor (CopB) DW350_RS17190 PF07731 Multicopper oxidase DW350_RS17190 PF07732 Multicopper oxidase DW350_RS17190 PF00394 Multicopper oxidase DW350_RS17195 PF00072 Response regulator receiver domain DW350_RS17195 PF00486 Transcriptional regulatory protein, C terminal DW350_RS17200 PF00512 His Kinase A (phospho-acceptor) domain DW350_RS17200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW350_RS17200 PF00672 HAMP domain DW350_RS17210 PF07715 TonB-dependent Receptor Plug Domain DW350_RS17210 PF00593 TonB dependent receptor DW350_RS17235 PF01042 Endoribonuclease L-PSP DW350_RS17270 PF00171 Aldehyde dehydrogenase family DW350_RS17285 PF00107 Zinc-binding dehydrogenase DW350_RS17285 PF16884 N-terminal domain of oxidoreductase DW350_RS17290 PF16925 Tetracyclin repressor-like, C-terminal domain DW350_RS17290 PF00440 Bacterial regulatory proteins, tetR family DW350_RS17305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS17305 PF03466 LysR substrate binding domain DW350_RS17310 PF12804 MobA-like NTP transferase domain DW350_RS17315 PF13478 XdhC Rossmann domain DW350_RS17315 PF02625 XdhC and CoxI family DW350_RS17320 PF00034 Cytochrome c DW350_RS17320 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DW350_RS17325 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DW350_RS17330 PF00111 2Fe-2S iron-sulfur cluster binding domain DW350_RS17330 PF01799 [2Fe-2S] binding domain DW350_RS17360 PF02954 Bacterial regulatory protein, Fis family DW350_RS17365 PF01207 Dihydrouridine synthase (Dus) DW350_RS17395 PF03169 OPT oligopeptide transporter protein DW350_RS17400 PF02785 Biotin carboxylase C-terminal domain DW350_RS17400 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DW350_RS17400 PF00289 Biotin carboxylase, N-terminal domain DW350_RS17405 PF00364 Biotin-requiring enzyme DW350_RS17410 PF01220 Dehydroquinase class II DW350_RS17415 PF01261 Xylose isomerase-like TIM barrel DW350_RS17420 PF06005 Cell division protein ZapB DW350_RS17430 PF06564 Cellulose biosynthesis protein BcsQ DW350_RS17435 PF07238 PilZ domain DW350_RS17435 PF03552 Cellulose synthase DW350_RS17435 PF03170 Bacterial cellulose synthase subunit DW350_RS17435 PF00535 Glycosyl transferase family 2 DW350_RS17440 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) DW350_RS17450 PF01270 Glycosyl hydrolases family 8 DW350_RS17455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS17455 PF03466 LysR substrate binding domain DW350_RS17470 PF13693 Winged helix-turn-helix DNA-binding DW350_RS17475 PF09039 Mu DNA binding, I gamma subdomain DW350_RS17475 PF02914 Bacteriophage Mu transposase DW350_RS17475 PF09299 Mu transposase, C-terminal DW350_RS17475 PF02316 Mu DNA-binding domain DW350_RS17480 PF09077 Mu B transposition protein, C terminal DW350_RS17480 PF13401 AAA domain DW350_RS17530 PF06252 Protein of unknown function (DUF1018) DW350_RS17540 PF08765 Mor transcription activator family DW350_RS17575 PF08461 Ribonuclease R winged-helix domain DW350_RS17580 PF11985 Protein of unknown function (DUF3486) DW350_RS17590 PF03237 Terminase-like family DW350_RS17595 PF06074 Protein of unknown function (DUF935) DW350_RS17630 PF10123 Mu-like prophage I protein DW350_RS17635 PF10124 Mu-like prophage major head subunit gpT DW350_RS17645 PF07030 Protein of unknown function (DUF1320) DW350_RS17725 PF01810 LysE type translocator DW350_RS17745 PF01979 Amidohydrolase family DW350_RS17750 PF00392 Bacterial regulatory proteins, gntR family DW350_RS17750 PF07702 UTRA domain DW350_RS17755 PF01175 Urocanase Rossmann-like domain DW350_RS17755 PF17392 Urocanase C-terminal domain DW350_RS17755 PF17391 Urocanase N-terminal domain DW350_RS17760 PF00221 Aromatic amino acid lyase DW350_RS17770 PF00672 HAMP domain DW350_RS17770 PF12729 Four helix bundle sensory module for signal transduction DW350_RS17770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW350_RS17775 PF00144 Beta-lactamase DW350_RS17800 PF01527 Transposase DW350_RS17805 PF13276 HTH-like domain DW350_RS17805 PF00665 Integrase core domain DW350_RS17805 PF13333 Integrase core domain DW350_RS17840 PF01965 DJ-1/PfpI family DW350_RS17860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS17860 PF03466 LysR substrate binding domain DW350_RS17890 PF03466 LysR substrate binding domain DW350_RS17890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS17920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS17920 PF03466 LysR substrate binding domain DW350_RS17925 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DW350_RS17925 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DW350_RS17930 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DW350_RS17950 PF00255 Glutathione peroxidase DW350_RS17955 PF07690 Major Facilitator Superfamily DW350_RS17960 PF01145 SPFH domain / Band 7 family DW350_RS17970 PF00255 Glutathione peroxidase DW350_RS17975 PF00326 Prolyl oligopeptidase family DW350_RS17975 PF07676 WD40-like Beta Propeller Repeat DW350_RS17990 PF07859 alpha/beta hydrolase fold DW350_RS17995 PF07715 TonB-dependent Receptor Plug Domain DW350_RS17995 PF00593 TonB dependent receptor DW350_RS18000 PF01048 Phosphorylase superfamily DW350_RS18005 PF01638 HxlR-like helix-turn-helix DW350_RS18010 PF00043 Glutathione S-transferase, C-terminal domain DW350_RS18010 PF02798 Glutathione S-transferase, N-terminal domain DW350_RS18015 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DW350_RS18015 PF01266 FAD dependent oxidoreductase DW350_RS18025 PF00999 Sodium/hydrogen exchanger family DW350_RS18045 PF07690 Major Facilitator Superfamily DW350_RS18050 PF01029 NusB family DW350_RS18050 PF01189 16S rRNA methyltransferase RsmB/F DW350_RS18075 PF00970 Oxidoreductase FAD-binding domain DW350_RS18075 PF00175 Oxidoreductase NAD-binding domain DW350_RS18085 PF04219 Protein of unknown function, DUF DW350_RS18090 PF08443 RimK-like ATP-grasp domain DW350_RS18090 PF18030 RimK PreATP-grasp domain DW350_RS18100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DW350_RS18105 PF00005 ABC transporter DW350_RS18110 PF12704 MacB-like periplasmic core domain DW350_RS18110 PF02687 FtsX-like permease family DW350_RS18110 PF00005 ABC transporter DW350_RS18115 PF12704 MacB-like periplasmic core domain DW350_RS18115 PF00005 ABC transporter DW350_RS18115 PF02687 FtsX-like permease family DW350_RS18120 PF02954 Bacterial regulatory protein, Fis family DW350_RS18120 PF00072 Response regulator receiver domain DW350_RS18120 PF00158 Sigma-54 interaction domain DW350_RS18125 PF00512 His Kinase A (phospho-acceptor) domain DW350_RS18125 PF00989 PAS fold DW350_RS18125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW350_RS18140 PF00150 Cellulase (glycosyl hydrolase family 5) DW350_RS18145 PF00210 Ferritin-like domain DW350_RS18155 PF08241 Methyltransferase domain DW350_RS18160 PF01219 Prokaryotic diacylglycerol kinase DW350_RS18175 PF03061 Thioesterase superfamily DW350_RS18180 PF00270 DEAD/DEAH box helicase DW350_RS18180 PF00570 HRDC domain DW350_RS18180 PF00271 Helicase conserved C-terminal domain DW350_RS18180 PF09382 RQC domain DW350_RS18180 PF16124 RecQ zinc-binding DW350_RS18195 PF02678 Pirin DW350_RS18195 PF17954 Quercetinase C-terminal cupin domain DW350_RS18200 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DW350_RS18210 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS18210 PF00563 EAL domain DW350_RS18210 PF03707 Bacterial signalling protein N terminal repeat DW350_RS18215 PF07568 Histidine kinase DW350_RS18215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW350_RS18215 PF12282 Signal transduction histidine kinase DW350_RS18220 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS18220 PF05230 MASE2 domain DW350_RS18225 PF00486 Transcriptional regulatory protein, C terminal DW350_RS18225 PF00072 Response regulator receiver domain DW350_RS18230 PF01569 PAP2 superfamily DW350_RS18235 PF02592 Putative vitamin uptake transporter DW350_RS18240 PF00563 EAL domain DW350_RS18240 PF12792 CSS motif domain associated with EAL DW350_RS18250 PF00563 EAL domain DW350_RS18250 PF00360 Phytochrome region DW350_RS18250 PF01590 GAF domain DW350_RS18250 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS18260 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DW350_RS18260 PF01367 5'-3' exonuclease, C-terminal SAM fold DW350_RS18260 PF00476 DNA polymerase family A DW350_RS18260 PF01612 3'-5' exonuclease DW350_RS18265 PF01926 50S ribosome-binding GTPase DW350_RS18270 PF00034 Cytochrome c DW350_RS18280 PF04220 Der GTPase activator (YihI) DW350_RS18285 PF10675 Protein of unknown function (DUF2489) DW350_RS18290 PF06969 HemN C-terminal domain DW350_RS18290 PF04055 Radical SAM superfamily DW350_RS18295 PF00962 Adenosine/AMP deaminase DW350_RS18305 PF00152 tRNA synthetases class II (D, K and N) DW350_RS18310 PF06526 Protein of unknown function (DUF1107) DW350_RS18315 PF02646 RmuC family DW350_RS18330 PF04226 Transglycosylase associated protein DW350_RS18350 PF01914 MarC family integral membrane protein DW350_RS18355 PF00593 TonB dependent receptor DW350_RS18360 PF00593 TonB dependent receptor DW350_RS18380 PF00005 ABC transporter DW350_RS18385 PF18075 FtsX extracellular domain DW350_RS18390 PF00140 Sigma-70 factor, region 1.2 DW350_RS18390 PF04545 Sigma-70, region 4 DW350_RS18390 PF04542 Sigma-70 region 2 DW350_RS18400 PF04748 Divergent polysaccharide deacetylase DW350_RS18405 PF03572 Peptidase family S41 DW350_RS18405 PF13180 PDZ domain DW350_RS18410 PF01551 Peptidase family M23 DW350_RS18415 PF01676 Metalloenzyme superfamily DW350_RS18415 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DW350_RS18420 PF00581 Rhodanese-like domain DW350_RS18425 PF00462 Glutaredoxin DW350_RS18430 PF02556 Preprotein translocase subunit SecB DW350_RS18435 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DW350_RS18435 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DW350_RS18440 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DW350_RS18440 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DW350_RS18450 PF12697 Alpha/beta hydrolase family DW350_RS18460 PF00440 Bacterial regulatory proteins, tetR family DW350_RS18465 PF00588 SpoU rRNA Methylase family DW350_RS18475 PF01545 Cation efflux family DW350_RS18475 PF16916 Dimerisation domain of Zinc Transporter DW350_RS18480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW350_RS18480 PF00512 His Kinase A (phospho-acceptor) domain DW350_RS18480 PF00672 HAMP domain DW350_RS18480 PF16527 Two-component sensor protein CpxA, periplasmic domain DW350_RS18485 PF00072 Response regulator receiver domain DW350_RS18485 PF00486 Transcriptional regulatory protein, C terminal DW350_RS18490 PF00072 Response regulator receiver domain DW350_RS18490 PF02954 Bacterial regulatory protein, Fis family DW350_RS18490 PF00158 Sigma-54 interaction domain DW350_RS18495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DW350_RS18495 PF00512 His Kinase A (phospho-acceptor) domain DW350_RS18495 PF00989 PAS fold DW350_RS18510 PF00120 Glutamine synthetase, catalytic domain DW350_RS18510 PF03951 Glutamine synthetase, beta-Grasp domain DW350_RS18520 PF03144 Elongation factor Tu domain 2 DW350_RS18520 PF00009 Elongation factor Tu GTP binding domain DW350_RS18520 PF00679 Elongation factor G C-terminus DW350_RS18545 PF03466 LysR substrate binding domain DW350_RS18545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS18550 PF14403 Circularly permuted ATP-grasp type 2 DW350_RS18555 PF04168 A predicted alpha-helical domain with a conserved ER motif. DW350_RS18555 PF14403 Circularly permuted ATP-grasp type 2 DW350_RS18570 PF01425 Amidase DW350_RS18575 PF08359 YsiA-like protein, C-terminal region DW350_RS18575 PF00440 Bacterial regulatory proteins, tetR family DW350_RS18585 PF00593 TonB dependent receptor DW350_RS18585 PF07715 TonB-dependent Receptor Plug Domain DW350_RS18590 PF00326 Prolyl oligopeptidase family DW350_RS18610 PF13460 NAD(P)H-binding DW350_RS18645 PF12945 Flagellar protein YcgR DW350_RS18645 PF07238 PilZ domain DW350_RS18700 PF12833 Helix-turn-helix domain DW350_RS18700 PF06719 AraC-type transcriptional regulator N-terminus DW350_RS18705 PF02525 Flavodoxin-like fold DW350_RS18710 PF13091 PLD-like domain DW350_RS18720 PF00563 EAL domain DW350_RS18720 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS18720 PF03707 Bacterial signalling protein N terminal repeat DW350_RS18730 PF01557 Fumarylacetoacetate (FAA) hydrolase family DW350_RS18745 PF02954 Bacterial regulatory protein, Fis family DW350_RS18745 PF00158 Sigma-54 interaction domain DW350_RS18745 PF00072 Response regulator receiver domain DW350_RS18755 PF05532 CsbD-like DW350_RS18770 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DW350_RS18770 PF00326 Prolyl oligopeptidase family DW350_RS18780 PF00196 Bacterial regulatory proteins, luxR family DW350_RS18780 PF03472 Autoinducer binding domain DW350_RS18795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DW350_RS18795 PF00529 HlyD membrane-fusion protein of T1SS DW350_RS18800 PF00873 AcrB/AcrD/AcrF family DW350_RS18805 PF02321 Outer membrane efflux protein DW350_RS18810 PF09339 IclR helix-turn-helix domain DW350_RS18810 PF01614 Bacterial transcriptional regulator DW350_RS18815 PF00171 Aldehyde dehydrogenase family DW350_RS18820 PF00465 Iron-containing alcohol dehydrogenase DW350_RS18830 PF01209 ubiE/COQ5 methyltransferase family DW350_RS18840 PF03109 ABC1 family DW350_RS18845 PF02416 mttA/Hcf106 family DW350_RS18850 PF02416 mttA/Hcf106 family DW350_RS18855 PF00902 Sec-independent protein translocase protein (TatC) DW350_RS18865 PF01026 TatD related DNase DW350_RS18870 PF00490 Delta-aminolevulinic acid dehydratase DW350_RS18875 PF00535 Glycosyl transferase family 2 DW350_RS18885 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase DW350_RS18900 PF00437 Type II/IV secretion system protein DW350_RS18905 PF02541 Ppx/GppA phosphatase family DW350_RS18910 PF00270 DEAD/DEAH box helicase DW350_RS18910 PF00271 Helicase conserved C-terminal domain DW350_RS18915 PF00085 Thioredoxin DW350_RS18920 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DW350_RS18920 PF07498 Rho termination factor, N-terminal domain DW350_RS18920 PF07497 Rho termination factor, RNA-binding domain DW350_RS18925 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DW350_RS18930 PF00970 Oxidoreductase FAD-binding domain DW350_RS18930 PF00175 Oxidoreductase NAD-binding domain DW350_RS18955 PF02602 Uroporphyrinogen-III synthase HemD DW350_RS18960 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DW350_RS18960 PF03900 Porphobilinogen deaminase, C-terminal domain DW350_RS18970 PF01295 Adenylate cyclase, class-I DW350_RS18970 PF12633 Adenylate cyclase NT domain DW350_RS18975 PF01491 Frataxin-like domain DW350_RS18985 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DW350_RS18985 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DW350_RS18990 PF01678 Diaminopimelate epimerase DW350_RS19000 PF02899 Phage integrase, N-terminal SAM-like domain DW350_RS19000 PF00589 Phage integrase family DW350_RS19005 PF13419 Haloacid dehalogenase-like hydrolase DW350_RS19010 PF13361 UvrD-like helicase C-terminal domain DW350_RS19010 PF00580 UvrD/REP helicase N-terminal domain DW350_RS19015 PF00574 Clp protease DW350_RS19020 PF00892 EamA-like transporter family DW350_RS19025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DW350_RS19035 PF00326 Prolyl oligopeptidase family DW350_RS19040 PF05746 DALR anticodon binding domain DW350_RS19040 PF00750 tRNA synthetases class I (R) DW350_RS19040 PF03485 Arginyl tRNA synthetase N terminal domain DW350_RS19045 PF01370 NAD dependent epimerase/dehydratase family DW350_RS19060 PF09500 Putative thioesterase (yiiD_Cterm) DW350_RS19060 PF00583 Acetyltransferase (GNAT) family DW350_RS19065 PF00210 Ferritin-like domain DW350_RS19070 PF02580 D-Tyr-tRNA(Tyr) deacylase DW350_RS19075 PF00561 alpha/beta hydrolase fold DW350_RS19080 PF03631 Virulence factor BrkB DW350_RS19100 PF00883 Cytosol aminopeptidase family, catalytic domain DW350_RS19100 PF02789 Cytosol aminopeptidase family, N-terminal domain DW350_RS19110 PF01553 Acyltransferase DW350_RS19115 PF01553 Acyltransferase DW350_RS19120 PF17944 Arginine decarboxylase C-terminal helical extension DW350_RS19120 PF17810 Arginine decarboxylase helical bundle domain DW350_RS19120 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DW350_RS19125 PF17284 Spermidine synthase tetramerisation domain DW350_RS19135 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DW350_RS19135 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DW350_RS19145 PF01078 Magnesium chelatase, subunit ChlI DW350_RS19145 PF13335 Magnesium chelatase, subunit ChlI C-terminal DW350_RS19160 PF04380 Membrane fusogenic activity DW350_RS19165 PF00440 Bacterial regulatory proteins, tetR family DW350_RS19170 PF13361 UvrD-like helicase C-terminal domain DW350_RS19170 PF00580 UvrD/REP helicase N-terminal domain DW350_RS19175 PF00563 EAL domain DW350_RS19175 PF00990 Diguanylate cyclase, GGDEF domain DW350_RS19175 PF03707 Bacterial signalling protein N terminal repeat DW350_RS19200 PF01323 DSBA-like thioredoxin domain DW350_RS19205 PF01636 Phosphotransferase enzyme family DW350_RS19215 PF00109 Beta-ketoacyl synthase, N-terminal domain DW350_RS19215 PF02801 Beta-ketoacyl synthase, C-terminal domain DW350_RS19230 PF07690 Major Facilitator Superfamily DW350_RS19235 PF00440 Bacterial regulatory proteins, tetR family DW350_RS19245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS19245 PF03466 LysR substrate binding domain DW350_RS19250 PF00106 short chain dehydrogenase DW350_RS19255 PF12833 Helix-turn-helix domain DW350_RS19260 PF00106 short chain dehydrogenase DW350_RS19265 PF01380 SIS domain DW350_RS19270 PF08220 DeoR-like helix-turn-helix domain DW350_RS19270 PF00455 DeoR C terminal sensor domain DW350_RS19280 PF12804 MobA-like NTP transferase domain DW350_RS19280 PF00132 Bacterial transferase hexapeptide (six repeats) DW350_RS19280 PF14602 Hexapeptide repeat of succinyl-transferase DW350_RS19285 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DW350_RS19285 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DW350_RS19290 PF02874 ATP synthase alpha/beta family, beta-barrel domain DW350_RS19290 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DW350_RS19295 PF00231 ATP synthase DW350_RS19300 PF02874 ATP synthase alpha/beta family, beta-barrel domain DW350_RS19300 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DW350_RS19300 PF00306 ATP synthase alpha/beta chain, C terminal domain DW350_RS19305 PF00213 ATP synthase delta (OSCP) subunit DW350_RS19310 PF00430 ATP synthase B/B' CF(0) DW350_RS19315 PF00137 ATP synthase subunit C DW350_RS19320 PF00119 ATP synthase A chain DW350_RS19330 PF02195 ParB-like nuclease domain DW350_RS19330 PF17762 HTH domain found in ParB protein DW350_RS19340 PF02527 rRNA small subunit methyltransferase G DW350_RS19345 PF01134 Glucose inhibited division protein A DW350_RS19345 PF13932 GidA associated domain DW350_RS19350 PF00258 Flavodoxin DW350_RS19360 PF00529 HlyD membrane-fusion protein of T1SS DW350_RS19360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DW350_RS19370 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DW350_RS19375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DW350_RS19375 PF03466 LysR substrate binding domain DW350_RS19385 PF10396 GTP-binding protein TrmE N-terminus DW350_RS19385 PF12631 MnmE helical domain DW350_RS19385 PF01926 50S ribosome-binding GTPase DW350_RS19390 PF02096 60Kd inner membrane protein DW350_RS19390 PF14849 YidC periplasmic domain DW350_RS19395 PF01809 Putative membrane protein insertion efficiency factor DW350_RS19400 PF00825 Ribonuclease P DW350_RS19405 PF00468 Ribosomal protein L34