HMPREF9231_RS00005 PF00308 Bacterial dnaA protein HMPREF9231_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix HMPREF9231_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain HMPREF9231_RS00010 PF02767 DNA polymerase III beta subunit, central domain HMPREF9231_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain HMPREF9231_RS00020 PF05258 HMPREF9231_RS00020 HMPREF9231_RS00025 PF00204 DNA gyrase B HMPREF9231_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus HMPREF9231_RS00025 PF01751 Toprim domain HMPREF9231_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HMPREF9231_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A HMPREF9231_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller HMPREF9231_RS00035 PF12089 HMPREF9231_RS00035 HMPREF9231_RS00040 PF01741 Large-conductance mechanosensitive channel, MscL HMPREF9231_RS00045 PF01569 PAP2 superfamily HMPREF9231_RS00050 PF12401 Protein of unknown function (DUF2662) HMPREF9231_RS00050 PF16697 HMPREF9231_RS00050 HMPREF9231_RS00055 PF16697 HMPREF9231_RS00055 HMPREF9231_RS00060 PF13672 Protein phosphatase 2C HMPREF9231_RS00065 PF01098 HMPREF9231_RS00065 HMPREF9231_RS00070 PF00905 Penicillin binding protein transpeptidase domain HMPREF9231_RS00075 PF00069 Protein kinase domain HMPREF9231_RS00080 PF00069 Protein kinase domain HMPREF9231_RS00080 PF03793 PASTA domain HMPREF9231_RS00085 PF04203 Sortase family HMPREF9231_RS00090 PF05949 Bacterial protein of unknown function (DUF881) HMPREF9231_RS00095 PF06781 HMPREF9231_RS00095 HMPREF9231_RS00105 PF01694 Rhomboid family HMPREF9231_RS00115 PF00343 Carbohydrate phosphorylase HMPREF9231_RS00125 PF11273 HMPREF9231_RS00125 HMPREF9231_RS00130 PF00579 tRNA synthetases class I (W and Y) HMPREF9231_RS00135 PF06738 HMPREF9231_RS00135 HMPREF9231_RS00135 PF12821 HMPREF9231_RS00135 HMPREF9231_RS00140 PF00311 Phosphoenolpyruvate carboxylase HMPREF9231_RS00145 PF00484 Carbonic anhydrase HMPREF9231_RS00150 PF03773 HMPREF9231_RS00150 HMPREF9231_RS00160 PF00571 CBS domain HMPREF9231_RS00160 PF01595 HMPREF9231_RS00160 HMPREF9231_RS00160 PF03471 Transporter associated domain HMPREF9231_RS00165 PF00210 Ferritin-like domain HMPREF9231_RS00180 PF00122 E1-E2 ATPase HMPREF9231_RS00180 PF00702 haloacid dehalogenase-like hydrolase HMPREF9231_RS00185 PF07992 Pyridine nucleotide-disulphide oxidoreductase HMPREF9231_RS00190 PF01435 Peptidase family M48 HMPREF9231_RS00200 PF00005 ABC transporter HMPREF9231_RS00220 PF02661 Fic/DOC family HMPREF9231_RS00220 PF12728 Helix-turn-helix domain HMPREF9231_RS00225 PF13173 AAA domain HMPREF9231_RS00225 PF13635 HMPREF9231_RS00225 HMPREF9231_RS00235 PF11187 Protein of unknown function (DUF2974) HMPREF9231_RS00240 PF16154 HMPREF9231_RS00240 HMPREF9231_RS00245 PF00480 ROK family HMPREF9231_RS00250 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase HMPREF9231_RS00255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HMPREF9231_RS00260 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9231_RS00265 PF00005 ABC transporter HMPREF9231_RS00265 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9231_RS00265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HMPREF9231_RS00270 PF00005 ABC transporter HMPREF9231_RS00275 PF00701 Dihydrodipicolinate synthetase family HMPREF9231_RS00280 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HMPREF9231_RS00285 PF01979 Amidohydrolase family HMPREF9231_RS00290 PF00392 Bacterial regulatory proteins, gntR family HMPREF9231_RS00290 PF07729 FCD domain HMPREF9231_RS00295 PF13088 BNR repeat-like domain HMPREF9231_RS00305 PF01702 Queuine tRNA-ribosyltransferase HMPREF9231_RS00310 PF13180 PDZ domain HMPREF9231_RS00310 PF13365 Trypsin-like peptidase domain HMPREF9231_RS00315 PF00881 Nitroreductase family HMPREF9231_RS00325 PF00588 SpoU rRNA Methylase family HMPREF9231_RS00325 PF08032 RNA 2'-O ribose methyltransferase substrate binding HMPREF9231_RS00330 PF00122 E1-E2 ATPase HMPREF9231_RS00330 PF00689 Cation transporting ATPase, C-terminus HMPREF9231_RS00330 PF00690 Cation transporter/ATPase, N-terminus HMPREF9231_RS00330 PF00702 haloacid dehalogenase-like hydrolase HMPREF9231_RS00330 PF13246 Putative hydrolase of sodium-potassium ATPase alpha subunit HMPREF9231_RS00335 PF00692 dUTPase HMPREF9231_RS00340 PF02230 Phospholipase/Carboxylesterase HMPREF9231_RS00345 PF14437 HMPREF9231_RS00345 HMPREF9231_RS00350 PF00356 Bacterial regulatory proteins, lacI family HMPREF9231_RS00350 PF13377 Periplasmic binding protein-like domain HMPREF9231_RS00355 PF00005 ABC transporter HMPREF9231_RS00360 PF02653 HMPREF9231_RS00360 HMPREF9231_RS00365 PF13407 Periplasmic binding protein domain HMPREF9231_RS00370 PF05025 RbsD / FucU transport protein family HMPREF9231_RS00375 PF00294 pfkB family carbohydrate kinase HMPREF9231_RS00380 PF02558 Ketopantoate reductase PanE/ApbA HMPREF9231_RS00380 PF08546 Ketopantoate reductase PanE/ApbA C terminal HMPREF9231_RS00385 PF00128 Alpha amylase, catalytic domain HMPREF9231_RS00390 PF02146 Sir2 family HMPREF9231_RS00415 PF02110 Hydroxyethylthiazole kinase family HMPREF9231_RS00415 PF02581 Thiamine monophosphate synthase/TENI HMPREF9231_RS00420 PF03070 TENA/THI-4/PQQC family HMPREF9231_RS00420 PF08543 Phosphomethylpyrimidine kinase HMPREF9231_RS00445 PF00072 Response regulator receiver domain HMPREF9231_RS00445 PF00196 Bacterial regulatory proteins, luxR family HMPREF9231_RS00455 PF00005 ABC transporter HMPREF9231_RS00460 PF02687 HMPREF9231_RS00460 HMPREF9231_RS00460 PF12704 MacB-like periplasmic core domain HMPREF9231_RS00470 PF07690 Major Facilitator Superfamily HMPREF9231_RS00475 PF13416 Bacterial extracellular solute-binding protein HMPREF9231_RS00480 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9231_RS00485 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9231_RS00490 PF00128 Alpha amylase, catalytic domain HMPREF9231_RS00495 PF00356 Bacterial regulatory proteins, lacI family HMPREF9231_RS00495 PF13377 Periplasmic binding protein-like domain HMPREF9231_RS00500 PF00155 Aminotransferase class I and II HMPREF9231_RS00505 PF00999 Sodium/hydrogen exchanger family HMPREF9231_RS00520 PF00881 Nitroreductase family HMPREF9231_RS00530 PF00300 Histidine phosphatase superfamily (branch 1) HMPREF9231_RS00535 PF13416 Bacterial extracellular solute-binding protein HMPREF9231_RS00540 PF00356 Bacterial regulatory proteins, lacI family HMPREF9231_RS00540 PF13377 Periplasmic binding protein-like domain HMPREF9231_RS00545 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9231_RS00550 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9231_RS00555 PF04854 HMPREF9231_RS00555 HMPREF9231_RS00560 PF02446 4-alpha-glucanotransferase HMPREF9231_RS00570 PF00872 HMPREF9231_RS00570 HMPREF9231_RS00580 PF01381 Helix-turn-helix HMPREF9231_RS00585 PF05973 HMPREF9231_RS00585 HMPREF9231_RS00590 PF00436 Single-strand binding protein family HMPREF9231_RS00615 PF07690 Major Facilitator Superfamily HMPREF9231_RS00625 PF16364 HMPREF9231_RS00625 HMPREF9231_RS00635 PF00589 Phage integrase family HMPREF9231_RS00635 PF13495 Phage integrase, N-terminal SAM-like domain HMPREF9231_RS00645 PF00119 ATP synthase A chain HMPREF9231_RS00650 PF00137 ATP synthase subunit C HMPREF9231_RS00655 PF00430 ATP synthase B/B' CF(0) HMPREF9231_RS00660 PF00213 ATP synthase delta (OSCP) subunit HMPREF9231_RS00665 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HMPREF9231_RS00665 PF00306 ATP synthase alpha/beta chain, C terminal domain HMPREF9231_RS00665 PF02874 ATP synthase alpha/beta family, beta-barrel domain HMPREF9231_RS00670 PF00231 ATP synthase HMPREF9231_RS00675 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HMPREF9231_RS00675 PF02874 ATP synthase alpha/beta family, beta-barrel domain HMPREF9231_RS00680 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HMPREF9231_RS00690 PF13173 AAA domain HMPREF9231_RS00690 PF13635 HMPREF9231_RS00690 HMPREF9231_RS00700 PF01381 Helix-turn-helix HMPREF9231_RS00705 PF05015 Plasmid maintenance system killer protein HMPREF9231_RS00710 PF02661 Fic/DOC family HMPREF9231_RS00715 PF00294 pfkB family carbohydrate kinase HMPREF9231_RS00720 PF14486 Domain of unknown function (DUF4432) HMPREF9231_RS00725 PF07690 Major Facilitator Superfamily HMPREF9231_RS00730 PF01791 DeoC/LacD family aldolase HMPREF9231_RS00735 PF04198 Putative sugar-binding domain HMPREF9231_RS00740 PF02424 ApbE family HMPREF9231_RS00745 PF00512 His Kinase A (phospho-acceptor) domain HMPREF9231_RS00745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HMPREF9231_RS00750 PF00072 Response regulator receiver domain HMPREF9231_RS00750 PF00486 Transcriptional regulatory protein, C terminal HMPREF9231_RS00755 PF00005 ABC transporter HMPREF9231_RS00760 PF12730 HMPREF9231_RS00760 HMPREF9231_RS00765 PF12730 HMPREF9231_RS00765 HMPREF9231_RS00770 PF02384 N-6 DNA Methylase HMPREF9231_RS00770 PF12161 HsdM N-terminal domain HMPREF9231_RS00775 PF01420 Type I restriction modification DNA specificity domain HMPREF9231_RS00780 PF07751 HMPREF9231_RS00780 HMPREF9231_RS00785 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HMPREF9231_RS00785 PF04851 Type III restriction enzyme, res subunit HMPREF9231_RS00785 PF12008 Type I restriction and modification enzyme - subunit R C terminal HMPREF9231_RS00790 PF03239 HMPREF9231_RS00790 HMPREF9231_RS00795 PF10634 Fe2+ transport protein HMPREF9231_RS00800 PF10080 HMPREF9231_RS00800 HMPREF9231_RS00805 PF02687 HMPREF9231_RS00805 HMPREF9231_RS00805 PF12704 MacB-like periplasmic core domain HMPREF9231_RS00810 PF02687 HMPREF9231_RS00810 HMPREF9231_RS00815 PF00005 ABC transporter HMPREF9231_RS00820 PF04205 FMN-binding domain HMPREF9231_RS00825 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) HMPREF9231_RS00830 PF12686 HMPREF9231_RS00830 HMPREF9231_RS00850 PF00072 Response regulator receiver domain HMPREF9231_RS00850 PF00196 Bacterial regulatory proteins, luxR family HMPREF9231_RS00865 PF00072 Response regulator receiver domain HMPREF9231_RS00865 PF00196 Bacterial regulatory proteins, luxR family HMPREF9231_RS00875 PF09862 HMPREF9231_RS00875 HMPREF9231_RS00880 PF01637 Archaeal ATPase HMPREF9231_RS00880 PF03008 HMPREF9231_RS00880 HMPREF9231_RS00885 PF04221 RelB antitoxin HMPREF9231_RS00895 PF00268 Ribonucleotide reductase, small chain HMPREF9231_RS00900 PF00317 Ribonucleotide reductase, all-alpha domain HMPREF9231_RS00900 PF02867 Ribonucleotide reductase, barrel domain HMPREF9231_RS00900 PF08343 Ribonucleotide reductase N-terminal HMPREF9231_RS00905 PF07972 NrdI Flavodoxin like HMPREF9231_RS00910 PF00462 Glutaredoxin HMPREF9231_RS00915 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HMPREF9231_RS00915 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HMPREF9231_RS00920 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HMPREF9231_RS00925 PF10128 HMPREF9231_RS00925 HMPREF9231_RS00930 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain HMPREF9231_RS00930 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain HMPREF9231_RS00935 PF01757 HMPREF9231_RS00935 HMPREF9231_RS00940 PF00719 Inorganic pyrophosphatase HMPREF9231_RS00950 PF00486 Transcriptional regulatory protein, C terminal HMPREF9231_RS00955 PF00633 Helix-hairpin-helix motif HMPREF9231_RS00955 PF00730 HhH-GPD superfamily base excision DNA repair protein HMPREF9231_RS00955 PF10576 Iron-sulfur binding domain of endonuclease III HMPREF9231_RS00960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HMPREF9231_RS00965 PF00133 tRNA synthetases class I (I, L, M and V) HMPREF9231_RS00965 PF08264 Anticodon-binding domain of tRNA HMPREF9231_RS00970 PF00750 tRNA synthetases class I (R) HMPREF9231_RS00970 PF03485 Arginyl tRNA synthetase N terminal domain HMPREF9231_RS00970 PF05746 DALR anticodon binding domain HMPREF9231_RS00975 PF05525 HMPREF9231_RS00975 HMPREF9231_RS00980 PF01187 Macrophage migration inhibitory factor (MIF) HMPREF9231_RS00985 PF04138 HMPREF9231_RS00985 HMPREF9231_RS00990 PF00300 Histidine phosphatase superfamily (branch 1) HMPREF9231_RS01000 PF00749 tRNA synthetases class I (E and Q), catalytic domain HMPREF9231_RS01025 PF04203 Sortase family HMPREF9231_RS01030 PF00498 FHA domain HMPREF9231_RS01055 PF00166 Chaperonin 10 Kd subunit HMPREF9231_RS01060 PF00155 Aminotransferase class I and II HMPREF9231_RS01080 PF00471 Ribosomal protein L33 HMPREF9231_RS01085 PF01565 FAD binding domain HMPREF9231_RS01085 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HMPREF9231_RS01090 PF13520 Amino acid permease HMPREF9231_RS01095 PF00037 4Fe-4S binding domain HMPREF9231_RS01100 PF00817 impB/mucB/samB family HMPREF9231_RS01100 PF11799 impB/mucB/samB family C-terminal domain HMPREF9231_RS01100 PF14520 Helix-hairpin-helix domain HMPREF9231_RS01105 PF00892 EamA-like transporter family HMPREF9231_RS01120 PF02583 Metal-sensitive transcriptional repressor HMPREF9231_RS01125 PF01205 Uncharacterized protein family UPF0029 HMPREF9231_RS01125 PF09186 Domain of unknown function (DUF1949) HMPREF9231_RS01135 PF02446 4-alpha-glucanotransferase HMPREF9231_RS01140 PF00572 Ribosomal protein L13 HMPREF9231_RS01145 PF00380 Ribosomal protein S9/S16 HMPREF9231_RS01150 PF00171 Aldehyde dehydrogenase family HMPREF9231_RS01150 PF00465 Iron-containing alcohol dehydrogenase HMPREF9231_RS01155 PF00338 Ribosomal protein S10p/S20e HMPREF9231_RS01160 PF00297 Ribosomal protein L3 HMPREF9231_RS01165 PF00573 Ribosomal protein L4/L1 family HMPREF9231_RS01170 PF00276 Ribosomal protein L23 HMPREF9231_RS01175 PF00181 Ribosomal Proteins L2, RNA binding domain HMPREF9231_RS01175 PF03947 Ribosomal Proteins L2, C-terminal domain HMPREF9231_RS01180 PF00203 Ribosomal protein S19 HMPREF9231_RS01185 PF00237 Ribosomal protein L22p/L17e HMPREF9231_RS01190 PF00189 Ribosomal protein S3, C-terminal domain HMPREF9231_RS01190 PF07650 KH domain HMPREF9231_RS01195 PF00252 Ribosomal protein L16p/L10e HMPREF9231_RS01200 PF00831 Ribosomal L29 protein HMPREF9231_RS01205 PF00366 Ribosomal protein S17 HMPREF9231_RS01210 PF00238 Ribosomal protein L14p/L23e HMPREF9231_RS01215 PF00467 KOW motif HMPREF9231_RS01215 PF17136 HMPREF9231_RS01215 HMPREF9231_RS01220 PF00281 Ribosomal protein L5 HMPREF9231_RS01220 PF00673 ribosomal L5P family C-terminus HMPREF9231_RS01225 PF00253 Ribosomal protein S14p/S29e HMPREF9231_RS01230 PF00410 Ribosomal protein S8 HMPREF9231_RS01235 PF00347 Ribosomal protein L6 HMPREF9231_RS01240 PF00861 Ribosomal L18p/L5e family HMPREF9231_RS01245 PF00333 Ribosomal protein S5, N-terminal domain HMPREF9231_RS01245 PF03719 Ribosomal protein S5, C-terminal domain HMPREF9231_RS01250 PF00327 Ribosomal protein L30p/L7e HMPREF9231_RS01255 PF00828 Ribosomal protein L18e/L15 HMPREF9231_RS01260 PF00344 SecY translocase HMPREF9231_RS01265 PF00406 Adenylate kinase HMPREF9231_RS01270 PF01176 Translation initiation factor 1A / IF-1 HMPREF9231_RS01275 PF00416 Ribosomal protein S13/S18 HMPREF9231_RS01280 PF00411 Ribosomal protein S11 HMPREF9231_RS01285 PF01000 RNA polymerase Rpb3/RpoA insert domain HMPREF9231_RS01285 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HMPREF9231_RS01285 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HMPREF9231_RS01290 PF01196 Ribosomal protein L17 HMPREF9231_RS01295 PF11187 Protein of unknown function (DUF2974) HMPREF9231_RS01300 PF01416 tRNA pseudouridine synthase HMPREF9231_RS01310 PF00356 Bacterial regulatory proteins, lacI family HMPREF9231_RS01310 PF13377 Periplasmic binding protein-like domain HMPREF9231_RS01315 PF13416 Bacterial extracellular solute-binding protein HMPREF9231_RS01320 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9231_RS01325 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9231_RS01330 PF03632 Glycosyl hydrolase family 65 central catalytic domain HMPREF9231_RS01330 PF03633 Glycosyl hydrolase family 65, C-terminal domain HMPREF9231_RS01330 PF03636 Glycosyl hydrolase family 65, N-terminal domain HMPREF9231_RS01335 PF00892 EamA-like transporter family HMPREF9231_RS01340 PF13419 Haloacid dehalogenase-like hydrolase HMPREF9231_RS01345 PF00703 Glycosyl hydrolases family 2 HMPREF9231_RS01345 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HMPREF9231_RS01345 PF02837 Glycosyl hydrolases family 2, sugar binding domain HMPREF9231_RS01345 PF02929 Beta galactosidase small chain HMPREF9231_RS01355 PF00480 ROK family HMPREF9231_RS01360 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HMPREF9231_RS01360 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HMPREF9231_RS01365 PF13407 Periplasmic binding protein domain HMPREF9231_RS01370 PF00005 ABC transporter HMPREF9231_RS01375 PF02653 HMPREF9231_RS01375 HMPREF9231_RS01380 PF02653 HMPREF9231_RS01380 HMPREF9231_RS01385 PF01380 SIS domain HMPREF9231_RS01395 PF00872 HMPREF9231_RS01395 HMPREF9231_RS01420 PF08808 HMPREF9231_RS01420 HMPREF9231_RS01425 PF00356 Bacterial regulatory proteins, lacI family HMPREF9231_RS01425 PF13377 Periplasmic binding protein-like domain HMPREF9231_RS01430 PF07090 Protein of unknown function (DUF1355) HMPREF9231_RS01435 PF04657 HMPREF9231_RS01435 HMPREF9231_RS01440 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family HMPREF9231_RS01445 PF00356 Bacterial regulatory proteins, lacI family HMPREF9231_RS01445 PF13377 Periplasmic binding protein-like domain HMPREF9231_RS01450 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9231_RS01455 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9231_RS01460 PF04616 Glycosyl hydrolases family 43 HMPREF9231_RS01465 PF13416 Bacterial extracellular solute-binding protein HMPREF9231_RS01470 PF04607 Region found in RelA / SpoT proteins HMPREF9231_RS01475 PF13274 HMPREF9231_RS01475 HMPREF9231_RS01480 PF02632 BioY family HMPREF9231_RS01485 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain HMPREF9231_RS01485 PF00364 Biotin-requiring enzyme HMPREF9231_RS01485 PF02785 Biotin carboxylase C-terminal domain HMPREF9231_RS01485 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HMPREF9231_RS01490 PF01039 Carboxyl transferase domain HMPREF9231_RS01495 PF00109 Beta-ketoacyl synthase, N-terminal domain HMPREF9231_RS01495 PF00698 Acyl transferase domain HMPREF9231_RS01495 PF01575 MaoC like domain HMPREF9231_RS01495 PF02801 Beta-ketoacyl synthase, C-terminal domain HMPREF9231_RS01495 PF08354 Domain of unknown function (DUF1729) HMPREF9231_RS01500 PF00128 Alpha amylase, catalytic domain HMPREF9231_RS01500 PF02806 Alpha amylase, C-terminal all-beta domain HMPREF9231_RS01500 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HMPREF9231_RS01500 PF03423 Carbohydrate binding domain (family 25) HMPREF9231_RS01500 PF03714 Bacterial pullanase-associated domain HMPREF9231_RS01505 PF08428 HMPREF9231_RS01505 HMPREF9231_RS01510 PF01648 4'-phosphopantetheinyl transferase superfamily HMPREF9231_RS01520 PF01183 Glycosyl hydrolases family 25 HMPREF9231_RS01535 PF00342 Phosphoglucose isomerase HMPREF9231_RS01545 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9231_RS01550 PF00005 ABC transporter HMPREF9231_RS01550 PF09821 HMPREF9231_RS01550 HMPREF9231_RS01555 PF01245 Ribosomal protein L19 HMPREF9231_RS01560 PF00717 Peptidase S24-like HMPREF9231_RS01565 PF01351 Ribonuclease HII HMPREF9231_RS01570 PF00664 ABC transporter transmembrane region HMPREF9231_RS01575 PF07510 HMPREF9231_RS01575 HMPREF9231_RS01580 PF00872 HMPREF9231_RS01580 HMPREF9231_RS01590 PF00892 EamA-like transporter family HMPREF9231_RS01595 PF00588 SpoU rRNA Methylase family HMPREF9231_RS01605 PF00562 RNA polymerase Rpb2, domain 6 HMPREF9231_RS01605 PF04560 RNA polymerase Rpb2, domain 7 HMPREF9231_RS01605 PF04561 RNA polymerase Rpb2, domain 2 HMPREF9231_RS01605 PF04563 RNA polymerase beta subunit HMPREF9231_RS01605 PF04565 RNA polymerase Rpb2, domain 3 HMPREF9231_RS01605 PF10385 RNA polymerase beta subunit external 1 domain HMPREF9231_RS01610 PF00623 RNA polymerase Rpb1, domain 2 HMPREF9231_RS01610 PF04983 RNA polymerase Rpb1, domain 3 HMPREF9231_RS01610 PF04997 RNA polymerase Rpb1, domain 1 HMPREF9231_RS01610 PF04998 RNA polymerase Rpb1, domain 5 HMPREF9231_RS01610 PF05000 RNA polymerase Rpb1, domain 4 HMPREF9231_RS01615 PF13173 AAA domain HMPREF9231_RS01615 PF13635 HMPREF9231_RS01615 HMPREF9231_RS01620 PF05738 Cna protein B-type domain HMPREF9231_RS01625 PF04203 Sortase family HMPREF9231_RS01640 PF12705 PD-(D/E)XK nuclease superfamily HMPREF9231_RS01640 PF13361 UvrD-like helicase C-terminal domain HMPREF9231_RS01645 PF00580 UvrD/REP helicase N-terminal domain HMPREF9231_RS01645 PF12705 PD-(D/E)XK nuclease superfamily HMPREF9231_RS01645 PF13361 UvrD-like helicase C-terminal domain HMPREF9231_RS01650 PF00583 Acetyltransferase (GNAT) family HMPREF9231_RS01660 PF01468 GA module HMPREF9231_RS01670 PF07690 Major Facilitator Superfamily HMPREF9231_RS01675 PF07521 RNA-metabolising metallo-beta-lactamase HMPREF9231_RS01675 PF12706 Beta-lactamase superfamily domain HMPREF9231_RS01680 PF01433 Peptidase family M1 HMPREF9231_RS01680 PF11838 ERAP1-like C-terminal domain HMPREF9231_RS01685 PF00557 Metallopeptidase family M24 HMPREF9231_RS01685 PF05195 Aminopeptidase P, N-terminal domain HMPREF9231_RS01690 PF00294 pfkB family carbohydrate kinase HMPREF9231_RS01700 PF09819 HMPREF9231_RS01700 HMPREF9231_RS01705 PF02875 Mur ligase family, glutamate ligase domain HMPREF9231_RS01705 PF08245 Mur ligase middle domain HMPREF9231_RS01710 PF02875 Mur ligase family, glutamate ligase domain HMPREF9231_RS01710 PF08245 Mur ligase middle domain HMPREF9231_RS01715 PF00929 Exonuclease HMPREF9231_RS01720 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain HMPREF9231_RS01720 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain HMPREF9231_RS01725 PF00288 GHMP kinases N terminal domain HMPREF9231_RS01725 PF08544 GHMP kinases C terminal HMPREF9231_RS01725 PF10509 Galactokinase galactose-binding signature HMPREF9231_RS01730 PF16126 HMPREF9231_RS01730 HMPREF9231_RS01735 PF02378 Phosphotransferase system, EIIC HMPREF9231_RS01740 PF01547 Bacterial extracellular solute-binding protein HMPREF9231_RS01745 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9231_RS01750 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9231_RS01755 PF00480 ROK family HMPREF9231_RS01755 PF13412 Winged helix-turn-helix DNA-binding HMPREF9231_RS01760 PF01370 NAD dependent epimerase/dehydratase family HMPREF9231_RS01770 PF01381 Helix-turn-helix HMPREF9231_RS01775 PF06414 Zeta toxin HMPREF9231_RS01780 PF01263 Aldose 1-epimerase HMPREF9231_RS01785 PF04073 Aminoacyl-tRNA editing domain HMPREF9231_RS01790 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HMPREF9231_RS01790 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HMPREF9231_RS01795 PF04263 Thiamin pyrophosphokinase, catalytic domain HMPREF9231_RS01795 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain HMPREF9231_RS01800 PF00707 Translation initiation factor IF-3, C-terminal domain HMPREF9231_RS01800 PF05198 Translation initiation factor IF-3, N-terminal domain HMPREF9231_RS01805 PF01632 Ribosomal protein L35 HMPREF9231_RS01810 PF00453 Ribosomal protein L20 HMPREF9231_RS01815 PF13740 ACT domain HMPREF9231_RS01820 PF05167 Uncharacterised ACR (DUF711) HMPREF9231_RS01825 PF00294 pfkB family carbohydrate kinase HMPREF9231_RS01830 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HMPREF9231_RS01830 PF14572 Phosphoribosyl synthetase-associated domain HMPREF9231_RS01835 PF01250 Ribosomal protein S6 HMPREF9231_RS01840 PF00436 Single-strand binding protein family HMPREF9231_RS01845 PF01084 Ribosomal protein S18 HMPREF9231_RS01850 PF01281 Ribosomal protein L9, N-terminal domain HMPREF9231_RS01850 PF03948 Ribosomal protein L9, C-terminal domain HMPREF9231_RS01860 PF00288 GHMP kinases N terminal domain HMPREF9231_RS01860 PF08544 GHMP kinases C terminal HMPREF9231_RS01865 PF00288 GHMP kinases N terminal domain HMPREF9231_RS01875 PF00830 Ribosomal L28 family HMPREF9231_RS01880 PF00270 DEAD/DEAH box helicase HMPREF9231_RS01880 PF00271 Helicase conserved C-terminal domain HMPREF9231_RS01880 PF17191 HMPREF9231_RS01880 HMPREF9231_RS01885 PF00294 pfkB family carbohydrate kinase HMPREF9231_RS01885 PF13412 Winged helix-turn-helix DNA-binding HMPREF9231_RS01890 PF07690 Major Facilitator Superfamily HMPREF9231_RS01895 PF01156 Inosine-uridine preferring nucleoside hydrolase HMPREF9231_RS01900 PF03602 Conserved hypothetical protein 95 HMPREF9231_RS01905 PF01746 tRNA (Guanine-1)-methyltransferase HMPREF9231_RS01910 PF01782 RimM N-terminal domain HMPREF9231_RS01910 PF05239 PRC-barrel domain HMPREF9231_RS01915 PF13083 KH domain HMPREF9231_RS01920 PF00886 Ribosomal protein S16 HMPREF9231_RS01925 PF03372 Endonuclease/Exonuclease/phosphatase family HMPREF9231_RS01930 PF00448 SRP54-type protein, GTPase domain HMPREF9231_RS01930 PF02881 SRP54-type protein, helical bundle domain HMPREF9231_RS01930 PF02978 Signal peptide binding domain HMPREF9231_RS01935 PF01406 tRNA synthetases class I (C) catalytic domain HMPREF9231_RS01935 PF09190 DALR domain HMPREF9231_RS01940 PF11238 HMPREF9231_RS01940 HMPREF9231_RS01945 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HMPREF9231_RS01950 PF01467 Cytidylyltransferase HMPREF9231_RS01960 PF02620 HMPREF9231_RS01960 HMPREF9231_RS01965 PF01783 Ribosomal L32p protein family HMPREF9231_RS01970 PF00035 Double-stranded RNA binding motif HMPREF9231_RS01970 PF14622 Ribonuclease-III-like HMPREF9231_RS01975 PF00589 Phage integrase family HMPREF9231_RS01975 PF02899 Phage integrase, N-terminal SAM-like domain HMPREF9231_RS01980 PF06769 Plasmid encoded toxin Txe HMPREF9231_RS01985 PF04221 RelB antitoxin HMPREF9231_RS01990 PF01458 Uncharacterized protein family (UPF0051) HMPREF9231_RS01995 PF01458 Uncharacterized protein family (UPF0051) HMPREF9231_RS02000 PF00005 ABC transporter HMPREF9231_RS02005 PF00009 Elongation factor Tu GTP binding domain HMPREF9231_RS02005 PF00679 Elongation factor G C-terminus HMPREF9231_RS02005 PF03144 Elongation factor Tu domain 2 HMPREF9231_RS02015 PF00800 Prephenate dehydratase HMPREF9231_RS02020 PF02153 Prephenate dehydrogenase HMPREF9231_RS02025 PF00589 Phage integrase family HMPREF9231_RS02025 PF02899 Phage integrase, N-terminal SAM-like domain HMPREF9231_RS02030 PF13614 AAA domain HMPREF9231_RS02055 PF04203 Sortase family HMPREF9231_RS02060 PF04607 Region found in RelA / SpoT proteins HMPREF9231_RS02065 PF01027 Inhibitor of apoptosis-promoting Bax1 HMPREF9231_RS02075 PF00872 HMPREF9231_RS02075 HMPREF9231_RS02080 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal HMPREF9231_RS02085 PF00368 Hydroxymethylglutaryl-coenzyme A reductase HMPREF9231_RS02090 PF00108 Thiolase, N-terminal domain HMPREF9231_RS02090 PF02803 Thiolase, C-terminal domain HMPREF9231_RS02095 PF00156 Phosphoribosyl transferase domain HMPREF9231_RS02100 PF00580 UvrD/REP helicase N-terminal domain HMPREF9231_RS02100 PF13361 UvrD-like helicase C-terminal domain HMPREF9231_RS02105 PF14387 HMPREF9231_RS02105 HMPREF9231_RS02110 PF02687 HMPREF9231_RS02110 HMPREF9231_RS02115 PF00005 ABC transporter HMPREF9231_RS02120 PF00163 Ribosomal protein S4/S9 N-terminal domain HMPREF9231_RS02120 PF01479 S4 domain HMPREF9231_RS02125 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain HMPREF9231_RS02125 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain HMPREF9231_RS02130 PF00300 Histidine phosphatase superfamily (branch 1) HMPREF9231_RS02135 PF06103 HMPREF9231_RS02135 HMPREF9231_RS02145 PF01411 tRNA synthetases class II (A) HMPREF9231_RS02145 PF02272 DHHA1 domain HMPREF9231_RS02145 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HMPREF9231_RS02150 PF03652 Uncharacterised protein family (UPF0081) HMPREF9231_RS02155 PF02618 YceG-like family HMPREF9231_RS02165 PF01264 Chorismate synthase HMPREF9231_RS02170 PF01202 Shikimate kinase HMPREF9231_RS02170 PF01761 3-dehydroquinate synthase HMPREF9231_RS02175 PF01220 Dehydroquinase class II HMPREF9231_RS02180 PF00117 Glutamine amidotransferase class-I HMPREF9231_RS02180 PF06418 CTP synthase N-terminus HMPREF9231_RS02185 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HMPREF9231_RS02190 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9231_RS02195 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9231_RS02195 PF12911 HMPREF9231_RS02195 HMPREF9231_RS02200 PF00005 ABC transporter HMPREF9231_RS02200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HMPREF9231_RS02205 PF03372 Endonuclease/Exonuclease/phosphatase family HMPREF9231_RS02210 PF12502 HMPREF9231_RS02210 HMPREF9231_RS02215 PF11361 HMPREF9231_RS02215 HMPREF9231_RS02220 PF05958 tRNA (Uracil-5-)-methyltransferase HMPREF9231_RS02225 PF00005 ABC transporter HMPREF9231_RS02225 PF03412 Peptidase C39 family HMPREF9231_RS02245 PF00085 Thioredoxin HMPREF9231_RS02250 PF13098 Thioredoxin-like domain HMPREF9231_RS02290 PF04545 Sigma-70, region 4 HMPREF9231_RS02305 PF10926 HMPREF9231_RS02305 HMPREF9231_RS02310 PF10991 Protein of unknown function (DUF2815) HMPREF9231_RS02315 PF00476 DNA polymerase family A HMPREF9231_RS02325 PF08706 HMPREF9231_RS02325 HMPREF9231_RS02325 PF08708 Primase C terminal 1 (PriCT-1) HMPREF9231_RS02340 PF00176 SNF2 family N-terminal domain HMPREF9231_RS02345 PF04545 Sigma-70, region 4 HMPREF9231_RS02350 PF01471 Putative peptidoglycan binding domain HMPREF9231_RS02350 PF08924 Domain of unknown function (DUF1906) HMPREF9231_RS02370 PF00438 S-adenosylmethionine synthetase, N-terminal domain HMPREF9231_RS02375 PF01555 DNA methylase HMPREF9231_RS02375 PF02195 ParB-like nuclease domain HMPREF9231_RS02395 PF03354 HMPREF9231_RS02395 HMPREF9231_RS02400 PF04860 Phage portal protein HMPREF9231_RS02405 PF00574 Clp protease HMPREF9231_RS02410 PF05065 Phage capsid family HMPREF9231_RS02415 PF05135 Phage gp6-like head-tail connector protein HMPREF9231_RS02420 PF05521 Phage head-tail joining protein HMPREF9231_RS02425 PF04883 HMPREF9231_RS02425 HMPREF9231_RS02455 PF06605 Prophage endopeptidase tail HMPREF9231_RS02465 PF05105 HMPREF9231_RS02465 HMPREF9231_RS02470 PF01183 Glycosyl hydrolases family 25 HMPREF9231_RS02470 PF08230 HMPREF9231_RS02470 HMPREF9231_RS02485 PF00239 Resolvase, N terminal domain HMPREF9231_RS02485 PF07508 Recombinase HMPREF9231_RS02485 PF13408 Recombinase zinc beta ribbon domain HMPREF9231_RS02500 PF00293 NUDIX domain HMPREF9231_RS02505 PF13508 Acetyltransferase (GNAT) domain HMPREF9231_RS02510 PF04221 RelB antitoxin HMPREF9231_RS02520 PF01381 Helix-turn-helix HMPREF9231_RS02525 PF01381 Helix-turn-helix HMPREF9231_RS02535 PF01381 Helix-turn-helix HMPREF9231_RS02545 PF05016 Plasmid stabilisation system protein HMPREF9231_RS02550 PF04221 RelB antitoxin HMPREF9231_RS02555 PF13302 Acetyltransferase (GNAT) domain HMPREF9231_RS02570 PF00005 ABC transporter HMPREF9231_RS02575 PF00664 ABC transporter transmembrane region HMPREF9231_RS02580 PF04221 RelB antitoxin HMPREF9231_RS02585 PF13173 AAA domain HMPREF9231_RS02585 PF13635 HMPREF9231_RS02585 HMPREF9231_RS02590 PF06250 HMPREF9231_RS02590 HMPREF9231_RS02605 PF12822 Protein of unknown function (DUF3816) HMPREF9231_RS02610 PF02361 Cobalt transport protein HMPREF9231_RS02615 PF00005 ABC transporter HMPREF9231_RS02620 PF00005 ABC transporter HMPREF9231_RS02625 PF01156 Inosine-uridine preferring nucleoside hydrolase HMPREF9231_RS02630 PF00005 ABC transporter HMPREF9231_RS02640 PF01061 HMPREF9231_RS02640 HMPREF9231_RS02650 PF00375 Sodium:dicarboxylate symporter family HMPREF9231_RS02655 PF13673 Acetyltransferase (GNAT) domain HMPREF9231_RS02660 PF00132 Bacterial transferase hexapeptide (six repeats) HMPREF9231_RS02660 PF06426 Serine acetyltransferase, N-terminal HMPREF9231_RS02665 PF00291 Pyridoxal-phosphate dependent enzyme HMPREF9231_RS02670 PF01048 Phosphorylase superfamily HMPREF9231_RS02675 PF00005 ABC transporter HMPREF9231_RS02675 PF00664 ABC transporter transmembrane region HMPREF9231_RS02680 PF00005 ABC transporter HMPREF9231_RS02685 PF00005 ABC transporter HMPREF9231_RS02690 PF02361 Cobalt transport protein HMPREF9231_RS02700 PF11335 HMPREF9231_RS02700 HMPREF9231_RS02705 PF04011 LemA family HMPREF9231_RS02720 PF13561 Enoyl-(Acyl carrier protein) reductase HMPREF9231_RS02725 PF03812 HMPREF9231_RS02725 HMPREF9231_RS02730 PF00005 ABC transporter HMPREF9231_RS02735 PF12698 ABC-2 family transporter protein HMPREF9231_RS02740 PF03070 TENA/THI-4/PQQC family HMPREF9231_RS02745 PF00465 Iron-containing alcohol dehydrogenase HMPREF9231_RS02750 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HMPREF9231_RS02750 PF07992 Pyridine nucleotide-disulphide oxidoreductase HMPREF9231_RS02755 PF05534 HMPREF9231_RS02755 HMPREF9231_RS02760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HMPREF9231_RS02760 PF07568 HMPREF9231_RS02760 HMPREF9231_RS02760 PF12282 Signal transduction histidine kinase HMPREF9231_RS02765 PF02467 HMPREF9231_RS02765 HMPREF9231_RS02770 PF01580 FtsK/SpoIIIE family HMPREF9231_RS02775 PF03816 Cell envelope-related transcriptional attenuator domain HMPREF9231_RS02785 PF03816 Cell envelope-related transcriptional attenuator domain HMPREF9231_RS02800 PF06262 Possibl zinc metallo-peptidase HMPREF9231_RS02805 PF03332 Eukaryotic phosphomannomutase HMPREF9231_RS02810 PF00156 Phosphoribosyl transferase domain HMPREF9231_RS02815 PF00512 His Kinase A (phospho-acceptor) domain HMPREF9231_RS02815 PF00672 HAMP domain HMPREF9231_RS02815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HMPREF9231_RS02820 PF00072 Response regulator receiver domain HMPREF9231_RS02820 PF00486 Transcriptional regulatory protein, C terminal HMPREF9231_RS02825 PF00128 Alpha amylase, catalytic domain HMPREF9231_RS02825 PF02806 Alpha amylase, C-terminal all-beta domain HMPREF9231_RS02825 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HMPREF9231_RS02830 PF02559 CarD-like/TRCF domain HMPREF9231_RS02835 PF01297 Periplasmic solute binding protein family HMPREF9231_RS02840 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HMPREF9231_RS02840 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HMPREF9231_RS02845 PF00575 S1 RNA binding domain HMPREF9231_RS02850 PF05154 HMPREF9231_RS02850 HMPREF9231_RS02855 PF01121 Dephospho-CoA kinase HMPREF9231_RS02860 PF05154 HMPREF9231_RS02860 HMPREF9231_RS02865 PF01121 Dephospho-CoA kinase HMPREF9231_RS02870 PF00271 Helicase conserved C-terminal domain HMPREF9231_RS02870 PF02151 UvrB/uvrC motif HMPREF9231_RS02870 PF04851 Type III restriction enzyme, res subunit HMPREF9231_RS02870 PF12344 Ultra-violet resistance protein B HMPREF9231_RS02875 PF00224 Pyruvate kinase, barrel domain HMPREF9231_RS02875 PF02887 Pyruvate kinase, alpha/beta domain HMPREF9231_RS02890 PF00132 Bacterial transferase hexapeptide (six repeats) HMPREF9231_RS02890 PF12804 MobA-like NTP transferase domain HMPREF9231_RS02895 PF02410 Oligomerisation domain HMPREF9231_RS02900 PF00300 Histidine phosphatase superfamily (branch 1) HMPREF9231_RS02905 PF04397 LytTr DNA-binding domain HMPREF9231_RS02910 PF11457 HMPREF9231_RS02910 HMPREF9231_RS02915 PF01243 Pyridoxamine 5'-phosphate oxidase HMPREF9231_RS02920 PF00892 EamA-like transporter family HMPREF9231_RS02935 PF06965 Na+/H+ antiporter 1 HMPREF9231_RS02940 PF03641 Possible lysine decarboxylase HMPREF9231_RS02945 PF13085 2Fe-2S iron-sulfur cluster binding domain HMPREF9231_RS02945 PF13183 4Fe-4S dicluster domain HMPREF9231_RS02950 PF04452 RNA methyltransferase HMPREF9231_RS02955 PF11969 Scavenger mRNA decapping enzyme C-term binding HMPREF9231_RS02960 PF02562 PhoH-like protein HMPREF9231_RS02965 PF02130 Uncharacterized protein family UPF0054 HMPREF9231_RS02970 PF00571 CBS domain HMPREF9231_RS02970 PF01595 HMPREF9231_RS02970 HMPREF9231_RS02970 PF03471 Transporter associated domain HMPREF9231_RS02975 PF01926 50S ribosome-binding GTPase HMPREF9231_RS02975 PF07650 KH domain HMPREF9231_RS02990 PF00501 AMP-binding enzyme HMPREF9231_RS02995 PF01386 Ribosomal L25p family HMPREF9231_RS02995 PF14693 Ribosomal protein TL5, C-terminal domain HMPREF9231_RS03000 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) HMPREF9231_RS03005 PF01197 Ribosomal protein L31 HMPREF9231_RS03010 PF00472 RF-1 domain HMPREF9231_RS03010 PF03462 PCRF domain HMPREF9231_RS03015 PF03602 Conserved hypothetical protein 95 HMPREF9231_RS03020 PF01300 Telomere recombination HMPREF9231_RS03025 PF00953 Glycosyl transferase family 4 HMPREF9231_RS03030 PF00478 IMP dehydrogenase / GMP reductase domain HMPREF9231_RS03030 PF00571 CBS domain HMPREF9231_RS03045 PF00929 Exonuclease HMPREF9231_RS03050 PF05970 HMPREF9231_RS03050 HMPREF9231_RS03055 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HMPREF9231_RS03055 PF03129 Anticodon binding domain HMPREF9231_RS03055 PF04073 Aminoacyl-tRNA editing domain HMPREF9231_RS03060 PF00436 Single-strand binding protein family HMPREF9231_RS03070 PF01431 Peptidase family M13 HMPREF9231_RS03070 PF05649 Peptidase family M13 HMPREF9231_RS03075 PF00557 Metallopeptidase family M24 HMPREF9231_RS03080 PF00472 RF-1 domain HMPREF9231_RS03080 PF03462 PCRF domain HMPREF9231_RS03085 PF00005 ABC transporter HMPREF9231_RS03090 PF02687 HMPREF9231_RS03090 HMPREF9231_RS03095 PF05257 CHAP domain HMPREF9231_RS03100 PF01668 SmpB protein HMPREF9231_RS03105 PF00497 Bacterial extracellular solute-binding proteins, family 3 HMPREF9231_RS03110 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9231_RS03115 PF00005 ABC transporter HMPREF9231_RS03120 PF01380 SIS domain HMPREF9231_RS03120 PF13522 Glutamine amidotransferase domain HMPREF9231_RS03125 PF01547 Bacterial extracellular solute-binding protein HMPREF9231_RS03130 PF03309 Type III pantothenate kinase HMPREF9231_RS03135 PF00128 Alpha amylase, catalytic domain HMPREF9231_RS03135 PF02903 Alpha amylase, N-terminal ig-like domain HMPREF9231_RS03140 PF01174 SNO glutamine amidotransferase family HMPREF9231_RS03145 PF01680 SOR/SNZ family HMPREF9231_RS03150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HMPREF9231_RS03155 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9231_RS03160 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9231_RS03165 PF00005 ABC transporter HMPREF9231_RS03170 PF02664 S-Ribosylhomocysteinase (LuxS) HMPREF9231_RS03180 PF00842 Alanine racemase, C-terminal domain HMPREF9231_RS03180 PF01168 Alanine racemase, N-terminal domain HMPREF9231_RS03185 PF01966 HD domain HMPREF9231_RS03185 PF13286 Phosphohydrolase-associated domain HMPREF9231_RS03190 PF01807 CHC2 zinc finger HMPREF9231_RS03190 PF08275 DNA primase catalytic core, N-terminal domain HMPREF9231_RS03190 PF10410 DnaB-helicase binding domain of primase HMPREF9231_RS03190 PF13662 Toprim domain HMPREF9231_RS03195 PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) HMPREF9231_RS03200 PF01074 Glycosyl hydrolases family 38 N-terminal domain HMPREF9231_RS03200 PF07748 Glycosyl hydrolases family 38 C-terminal domain HMPREF9231_RS03200 PF09261 Alpha mannosidase, middle domain HMPREF9231_RS03205 PF00005 ABC transporter HMPREF9231_RS03210 PF00005 ABC transporter HMPREF9231_RS03215 PF02361 Cobalt transport protein HMPREF9231_RS03225 PF00027 Cyclic nucleotide-binding domain HMPREF9231_RS03225 PF13545 Crp-like helix-turn-helix domain HMPREF9231_RS03230 PF07690 Major Facilitator Superfamily HMPREF9231_RS03235 PF01156 Inosine-uridine preferring nucleoside hydrolase HMPREF9231_RS03240 PF00728 Glycosyl hydrolase family 20, catalytic domain HMPREF9231_RS03240 PF02838 Glycosyl hydrolase family 20, domain 2 HMPREF9231_RS03245 PF00480 ROK family HMPREF9231_RS03250 PF00480 ROK family HMPREF9231_RS03255 PF00205 Thiamine pyrophosphate enzyme, central domain HMPREF9231_RS03255 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HMPREF9231_RS03255 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HMPREF9231_RS03260 PF03600 Citrate transporter HMPREF9231_RS03265 PF03611 HMPREF9231_RS03265 HMPREF9231_RS03270 PF00392 Bacterial regulatory proteins, gntR family HMPREF9231_RS03270 PF07702 UTRA domain HMPREF9231_RS03275 PF01649 Ribosomal protein S20 HMPREF9231_RS03280 PF00009 Elongation factor Tu GTP binding domain HMPREF9231_RS03280 PF00679 Elongation factor G C-terminus HMPREF9231_RS03280 PF03144 Elongation factor Tu domain 2 HMPREF9231_RS03280 PF06421 GTP-binding protein LepA C-terminus HMPREF9231_RS03285 PF04055 Radical SAM superfamily HMPREF9231_RS03285 PF06969 HemN C-terminal domain HMPREF9231_RS03295 PF02687 HMPREF9231_RS03295 HMPREF9231_RS03300 PF02687 HMPREF9231_RS03300 HMPREF9231_RS03305 PF00005 ABC transporter HMPREF9231_RS03310 PF00731 AIR carboxylase HMPREF9231_RS03315 PF02222 ATP-grasp domain HMPREF9231_RS03320 PF01475 Ferric uptake regulator family HMPREF9231_RS03325 PF09924 Uncharacterized conserved protein (DUF2156) HMPREF9231_RS03330 PF00756 Putative esterase HMPREF9231_RS03335 PF00884 Sulfatase HMPREF9231_RS03340 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HMPREF9231_RS03340 PF02843 Phosphoribosylglycinamide synthetase, C domain HMPREF9231_RS03340 PF02844 Phosphoribosylglycinamide synthetase, N domain HMPREF9231_RS03345 PF00586 AIR synthase related protein, N-terminal domain HMPREF9231_RS03345 PF02769 AIR synthase related protein, C-terminal domain HMPREF9231_RS03350 PF00156 Phosphoribosyl transferase domain HMPREF9231_RS03350 PF13537 Glutamine amidotransferase domain HMPREF9231_RS03355 PF02769 AIR synthase related protein, C-terminal domain HMPREF9231_RS03355 PF13507 CobB/CobQ-like glutamine amidotransferase domain HMPREF9231_RS03360 PF01259 SAICAR synthetase HMPREF9231_RS03365 PF02222 ATP-grasp domain HMPREF9231_RS03375 PF01580 FtsK/SpoIIIE family HMPREF9231_RS03375 PF09397 Ftsk gamma domain HMPREF9231_RS03375 PF13491 HMPREF9231_RS03375 HMPREF9231_RS03380 PF01066 CDP-alcohol phosphatidyltransferase HMPREF9231_RS03385 PF02464 Competence-damaged protein HMPREF9231_RS03390 PF11248 HMPREF9231_RS03390 HMPREF9231_RS03395 PF00154 recA bacterial DNA recombination protein HMPREF9231_RS03400 PF02631 RecX family HMPREF9231_RS03405 PF00291 Pyridoxal-phosphate dependent enzyme HMPREF9231_RS03405 PF14821 Threonine synthase N terminus HMPREF9231_RS03410 PF00171 Aldehyde dehydrogenase family HMPREF9231_RS03420 PF01467 Cytidylyltransferase HMPREF9231_RS03425 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HMPREF9231_RS03425 PF14572 Phosphoribosyl synthetase-associated domain HMPREF9231_RS03435 PF01066 CDP-alcohol phosphatidyltransferase HMPREF9231_RS03440 PF01709 Transcriptional regulator HMPREF9231_RS03445 PF02075 Crossover junction endodeoxyribonuclease RuvC HMPREF9231_RS03450 PF01330 RuvA N terminal domain HMPREF9231_RS03450 PF07499 RuvA, C-terminal domain HMPREF9231_RS03450 PF14520 Helix-hairpin-helix domain HMPREF9231_RS03455 PF05491 Holliday junction DNA helicase ruvB C-terminus HMPREF9231_RS03455 PF05496 Holliday junction DNA helicase ruvB N-terminus HMPREF9231_RS03460 PF02699 Preprotein translocase subunit HMPREF9231_RS03465 PF00156 Phosphoribosyl transferase domain HMPREF9231_RS03475 PF01808 AICARFT/IMPCHase bienzyme HMPREF9231_RS03475 PF02142 MGS-like domain HMPREF9231_RS03480 PF11222 HMPREF9231_RS03480 HMPREF9231_RS03485 PF00230 Major intrinsic protein HMPREF9231_RS03490 PF00849 RNA pseudouridylate synthase HMPREF9231_RS03490 PF01479 S4 domain HMPREF9231_RS03495 PF01926 50S ribosome-binding GTPase HMPREF9231_RS03495 PF02224 Cytidylate kinase HMPREF9231_RS03495 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HMPREF9231_RS03500 PF00270 DEAD/DEAH box helicase HMPREF9231_RS03500 PF00271 Helicase conserved C-terminal domain HMPREF9231_RS03500 PF12029 HMPREF9231_RS03500 HMPREF9231_RS03510 PF01985 CRS1 / YhbY (CRM) domain HMPREF9231_RS03515 PF00005 ABC transporter HMPREF9231_RS03515 PF02361 Cobalt transport protein HMPREF9231_RS03520 PF12822 Protein of unknown function (DUF3816) HMPREF9231_RS03525 PF00535 Glycosyl transferase family 2 HMPREF9231_RS03530 PF00107 Zinc-binding dehydrogenase HMPREF9231_RS03530 PF08240 Alcohol dehydrogenase GroES-like domain HMPREF9231_RS03540 PF00578 AhpC/TSA family HMPREF9231_RS03540 PF10417 C-terminal domain of 1-Cys peroxiredoxin HMPREF9231_RS03545 PF07992 Pyridine nucleotide-disulphide oxidoreductase HMPREF9231_RS03545 PF13192 Thioredoxin domain HMPREF9231_RS03550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HMPREF9231_RS03550 PF03466 LysR substrate binding domain HMPREF9231_RS03560 PF00533 BRCA1 C Terminus (BRCT) domain HMPREF9231_RS03560 PF01653 NAD-dependent DNA ligase adenylation domain HMPREF9231_RS03560 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HMPREF9231_RS03560 PF03120 NAD-dependent DNA ligase OB-fold domain HMPREF9231_RS03560 PF12826 Helix-hairpin-helix motif HMPREF9231_RS03565 PF01883 Domain of unknown function DUF59 HMPREF9231_RS03565 PF10609 ParA/MinD ATPase like HMPREF9231_RS03570 PF03993 HMPREF9231_RS03570 HMPREF9231_RS03575 PF03129 Anticodon binding domain HMPREF9231_RS03575 PF13393 Histidyl-tRNA synthetase HMPREF9231_RS03580 PF00152 tRNA synthetases class II (D, K and N) HMPREF9231_RS03580 PF01336 OB-fold nucleic acid binding domain HMPREF9231_RS03580 PF02938 GAD domain HMPREF9231_RS03585 PF00005 ABC transporter HMPREF9231_RS03590 PF00497 Bacterial extracellular solute-binding proteins, family 3 HMPREF9231_RS03595 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9231_RS03600 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9231_RS03605 PF01704 UTP--glucose-1-phosphate uridylyltransferase HMPREF9231_RS03610 PF13280 HMPREF9231_RS03610 HMPREF9231_RS03620 PF00270 DEAD/DEAH box helicase HMPREF9231_RS03620 PF00271 Helicase conserved C-terminal domain HMPREF9231_RS03620 PF08148 DSHCT (NUC185) domain HMPREF9231_RS03625 PF13397 Domain of unknown function (DUF4109) HMPREF9231_RS03630 PF13419 Haloacid dehalogenase-like hydrolase HMPREF9231_RS03635 PF13411 MerR HTH family regulatory protein HMPREF9231_RS03640 PF00498 FHA domain HMPREF9231_RS03645 PF05949 Bacterial protein of unknown function (DUF881) HMPREF9231_RS03650 PF06947 HMPREF9231_RS03650 HMPREF9231_RS03655 PF05949 Bacterial protein of unknown function (DUF881) HMPREF9231_RS03660 PF01066 CDP-alcohol phosphatidyltransferase HMPREF9231_RS03665 PF00834 Ribulose-phosphate 3 epimerase family HMPREF9231_RS03670 PF01790 HMPREF9231_RS03670 HMPREF9231_RS03675 PF01148 Cytidylyltransferase family HMPREF9231_RS03680 PF01765 Ribosome recycling factor HMPREF9231_RS03685 PF00696 Amino acid kinase family HMPREF9231_RS03690 PF00889 Elongation factor TS HMPREF9231_RS03695 PF00318 Ribosomal protein S2 HMPREF9231_RS03700 PF01327 Polypeptide deformylase HMPREF9231_RS03705 PF00501 AMP-binding enzyme HMPREF9231_RS03715 PF00478 IMP dehydrogenase / GMP reductase domain HMPREF9231_RS03720 PF01541 GIY-YIG catalytic domain HMPREF9231_RS03720 PF02151 UvrB/uvrC motif HMPREF9231_RS03720 PF08459 UvrC Helix-hairpin-helix N-terminal HMPREF9231_RS03720 PF14520 Helix-hairpin-helix domain HMPREF9231_RS03725 PF00005 ABC transporter HMPREF9231_RS03730 PF00005 ABC transporter HMPREF9231_RS03730 PF12848 ABC transporter HMPREF9231_RS03740 PF00155 Aminotransferase class I and II HMPREF9231_RS03745 PF00480 ROK family HMPREF9231_RS03750 PF00459 Inositol monophosphatase family HMPREF9231_RS03755 PF12710 haloacid dehalogenase-like hydrolase HMPREF9231_RS03760 PF00551 Formyl transferase HMPREF9231_RS03760 PF02911 Formyl transferase, C-terminal domain HMPREF9231_RS03765 PF00226 DnaJ domain HMPREF9231_RS03765 PF00684 DnaJ central domain HMPREF9231_RS03765 PF01556 DnaJ C terminal domain HMPREF9231_RS03770 PF01628 HrcA protein C terminal domain HMPREF9231_RS03770 PF08220 DeoR-like helix-turn-helix domain HMPREF9231_RS03775 PF00456 Transketolase, thiamine diphosphate binding domain HMPREF9231_RS03775 PF02779 Transketolase, pyrimidine binding domain HMPREF9231_RS03775 PF02780 Transketolase, C-terminal domain HMPREF9231_RS03780 PF00923 Transaldolase HMPREF9231_RS03785 PF13749 ATP-dependent DNA helicase recG C-terminal HMPREF9231_RS03790 PF07739 TipAS antibiotic-recognition domain HMPREF9231_RS03790 PF13411 MerR HTH family regulatory protein HMPREF9231_RS03795 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system HMPREF9231_RS03805 PF03596 HMPREF9231_RS03805 HMPREF9231_RS03810 PF01925 HMPREF9231_RS03810 HMPREF9231_RS03815 PF00005 ABC transporter HMPREF9231_RS03830 PF13408 Recombinase zinc beta ribbon domain HMPREF9231_RS03835 PF01381 Helix-turn-helix HMPREF9231_RS03845 PF08282 haloacid dehalogenase-like hydrolase HMPREF9231_RS03850 PF03840 Preprotein translocase SecG subunit HMPREF9231_RS03855 PF00121 Triosephosphate isomerase HMPREF9231_RS03860 PF00162 Phosphoglycerate kinase HMPREF9231_RS03865 PF02650 WhiA C-terminal HTH domain HMPREF9231_RS03865 PF10298 WhiA N-terminal LAGLIDADG-like domain HMPREF9231_RS03865 PF14527 WhiA LAGLIDADG-like domain HMPREF9231_RS03870 PF03668 HMPREF9231_RS03870 HMPREF9231_RS03875 PF08501 Shikimate dehydrogenase substrate binding domain HMPREF9231_RS03885 PF00438 S-adenosylmethionine synthetase, N-terminal domain HMPREF9231_RS03885 PF02772 S-adenosylmethionine synthetase, central domain HMPREF9231_RS03885 PF02773 S-adenosylmethionine synthetase, C-terminal domain HMPREF9231_RS03890 PF01192 RNA polymerase Rpb6 HMPREF9231_RS03895 PF00625 Guanylate kinase HMPREF9231_RS03900 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HMPREF9231_RS03905 PF02142 MGS-like domain HMPREF9231_RS03905 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HMPREF9231_RS03905 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HMPREF9231_RS03910 PF00117 Glutamine amidotransferase class-I HMPREF9231_RS03910 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HMPREF9231_RS03915 PF01029 NusB family HMPREF9231_RS03920 PF01132 Elongation factor P (EF-P) OB domain HMPREF9231_RS03920 PF08207 Elongation factor P (EF-P) KOW-like domain HMPREF9231_RS03920 PF09285 Elongation factor P, C-terminal HMPREF9231_RS03930 PF00156 Phosphoribosyl transferase domain HMPREF9231_RS03935 PF01180 Dihydroorotate dehydrogenase HMPREF9231_RS03940 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B HMPREF9231_RS03945 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HMPREF9231_RS03950 PF01979 Amidohydrolase family HMPREF9231_RS03955 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HMPREF9231_RS03955 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HMPREF9231_RS03955 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain HMPREF9231_RS03960 PF03710 Glutamate-ammonia ligase adenylyltransferase HMPREF9231_RS03960 PF08335 GlnD PII-uridylyltransferase HMPREF9231_RS03965 PF02219 Methylenetetrahydrofolate reductase HMPREF9231_RS03970 PF01717 Cobalamin-independent synthase, Catalytic domain HMPREF9231_RS03970 PF08267 Cobalamin-independent synthase, N-terminal domain HMPREF9231_RS03975 PF00300 Histidine phosphatase superfamily (branch 1) HMPREF9231_RS03980 PF08704 tRNA methyltransferase complex GCD14 subunit HMPREF9231_RS03980 PF14801 tRNA methyltransferase complex GCD14 subunit N-term HMPREF9231_RS03985 PF00814 Glycoprotease family HMPREF9231_RS03990 PF00583 Acetyltransferase (GNAT) family HMPREF9231_RS03995 PF00814 Glycoprotease family HMPREF9231_RS04000 PF02367 Uncharacterised P-loop hydrolase UPF0079 HMPREF9231_RS04010 PF03772 HMPREF9231_RS04010 HMPREF9231_RS04015 PF12836 Helix-hairpin-helix motif HMPREF9231_RS04020 PF08264 Anticodon-binding domain of tRNA HMPREF9231_RS04020 PF09334 tRNA synthetases class I (M) HMPREF9231_RS04020 PF13603 Leucyl-tRNA synthetase, Domain 2 HMPREF9231_RS04030 PF11070 HMPREF9231_RS04030 HMPREF9231_RS04035 PF03881 Fructosamine kinase HMPREF9231_RS04045 PF00501 AMP-binding enzyme HMPREF9231_RS04050 PF01551 Peptidase family M23 HMPREF9231_RS04065 PF00324 Amino acid permease HMPREF9231_RS04070 PF03458 HMPREF9231_RS04070 HMPREF9231_RS04075 PF01063 Aminotransferase class IV HMPREF9231_RS04085 PF02541 Ppx/GppA phosphatase family HMPREF9231_RS04085 PF04417 HMPREF9231_RS04085 HMPREF9231_RS04090 PF04977 Septum formation initiator HMPREF9231_RS04095 PF00056 lactate/malate dehydrogenase, NAD binding domain HMPREF9231_RS04095 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HMPREF9231_RS04100 PF00113 Enolase, C-terminal TIM barrel domain HMPREF9231_RS04100 PF03952 Enolase, N-terminal domain HMPREF9231_RS04105 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9231_RS04110 PF09084 NMT1/THI5 like HMPREF9231_RS04115 PF00005 ABC transporter HMPREF9231_RS04120 PF00270 DEAD/DEAH box helicase HMPREF9231_RS04120 PF00271 Helicase conserved C-terminal domain HMPREF9231_RS04120 PF02559 CarD-like/TRCF domain HMPREF9231_RS04120 PF03461 TRCF domain HMPREF9231_RS04125 PF01195 Peptidyl-tRNA hydrolase HMPREF9231_RS04130 PF09084 NMT1/THI5 like HMPREF9231_RS04135 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9231_RS04140 PF03699 HMPREF9231_RS04140 HMPREF9231_RS04145 PF00860 Permease family HMPREF9231_RS04150 PF04343 HMPREF9231_RS04150 HMPREF9231_RS04155 PF03601 HMPREF9231_RS04155 HMPREF9231_RS04160 PF03734 L,D-transpeptidase catalytic domain HMPREF9231_RS04165 PF01926 50S ribosome-binding GTPase HMPREF9231_RS04165 PF06071 Protein of unknown function (DUF933) HMPREF9231_RS04170 PF03807 NADP oxidoreductase coenzyme F420-dependent HMPREF9231_RS04170 PF14748 Pyrroline-5-carboxylate reductase dimerisation HMPREF9231_RS04175 PF00561 alpha/beta hydrolase fold HMPREF9231_RS04180 PF07730 Histidine kinase HMPREF9231_RS04185 PF00072 Response regulator receiver domain HMPREF9231_RS04185 PF00196 Bacterial regulatory proteins, luxR family HMPREF9231_RS04195 PF02687 HMPREF9231_RS04195 HMPREF9231_RS04200 PF00005 ABC transporter HMPREF9231_RS04205 PF00465 Iron-containing alcohol dehydrogenase HMPREF9231_RS04210 PF00356 Bacterial regulatory proteins, lacI family HMPREF9231_RS04210 PF13377 Periplasmic binding protein-like domain HMPREF9231_RS04215 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HMPREF9231_RS04215 PF13378 Enolase C-terminal domain-like HMPREF9231_RS04220 PF13561 Enoyl-(Acyl carrier protein) reductase HMPREF9231_RS04225 PF07690 Major Facilitator Superfamily HMPREF9231_RS04230 PF04909 Amidohydrolase HMPREF9231_RS04235 PF00701 Dihydrodipicolinate synthetase family HMPREF9231_RS04240 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HMPREF9231_RS04240 PF03129 Anticodon binding domain HMPREF9231_RS04240 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HMPREF9231_RS04245 PF00950 HMPREF9231_RS04245 HMPREF9231_RS04250 PF00950 HMPREF9231_RS04250 HMPREF9231_RS04255 PF00005 ABC transporter HMPREF9231_RS04260 PF01297 Periplasmic solute binding protein family HMPREF9231_RS04265 PF01256 Carbohydrate kinase HMPREF9231_RS04270 PF13419 Haloacid dehalogenase-like hydrolase HMPREF9231_RS04275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HMPREF9231_RS04275 PF03466 LysR substrate binding domain HMPREF9231_RS04315 PF09848 Uncharacterized conserved protein (DUF2075) HMPREF9231_RS04320 PF00004 ATPase family associated with various cellular activities (AAA) HMPREF9231_RS04320 PF02151 UvrB/uvrC motif HMPREF9231_RS04320 PF02861 Clp amino terminal domain HMPREF9231_RS04320 PF07724 AAA domain (Cdc48 subfamily) HMPREF9231_RS04320 PF10431 C-terminal, D2-small domain, of ClpB protein HMPREF9231_RS04325 PF11228 HMPREF9231_RS04325 HMPREF9231_RS04330 PF00313 'Cold-shock' DNA-binding domain HMPREF9231_RS04335 PF00512 His Kinase A (phospho-acceptor) domain HMPREF9231_RS04335 PF00672 HAMP domain HMPREF9231_RS04335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HMPREF9231_RS04340 PF00072 Response regulator receiver domain HMPREF9231_RS04340 PF00486 Transcriptional regulatory protein, C terminal HMPREF9231_RS04350 PF06013 Proteins of 100 residues with WXG HMPREF9231_RS04355 PF00118 TCP-1/cpn60 chaperonin family HMPREF9231_RS04360 PF13399 LytR cell envelope-related transcriptional attenuator HMPREF9231_RS04365 PF03167 Uracil DNA glycosylase superfamily HMPREF9231_RS04370 PF07726 ATPase family associated with various cellular activities (AAA) HMPREF9231_RS04375 PF01882 HMPREF9231_RS04375 HMPREF9231_RS04385 PF13519 von Willebrand factor type A domain HMPREF9231_RS04390 PF13519 von Willebrand factor type A domain HMPREF9231_RS04405 PF07819 PGAP1-like protein HMPREF9231_RS04410 PF00206 Lyase HMPREF9231_RS04410 PF08328 Adenylosuccinate lyase C-terminal HMPREF9231_RS04415 PF03706 HMPREF9231_RS04415 HMPREF9231_RS04420 PF00216 Bacterial DNA-binding protein HMPREF9231_RS04430 PF00574 Clp protease HMPREF9231_RS04435 PF00574 Clp protease HMPREF9231_RS04440 PF00654 Voltage gated chloride channel HMPREF9231_RS04445 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HMPREF9231_RS04445 PF05697 Bacterial trigger factor protein (TF) HMPREF9231_RS04445 PF05698 Bacterial trigger factor protein (TF) C-terminus HMPREF9231_RS04450 PF00570 HRDC domain HMPREF9231_RS04450 PF01612 3'-5' exonuclease HMPREF9231_RS04460 PF04055 Radical SAM superfamily HMPREF9231_RS04460 PF13353 4Fe-4S single cluster domain HMPREF9231_RS04465 PF01228 Glycine radical HMPREF9231_RS04465 PF02901 Pyruvate formate lyase HMPREF9231_RS04470 PF00795 Carbon-nitrogen hydrolase HMPREF9231_RS04470 PF02540 NAD synthase HMPREF9231_RS04475 PF03180 NLPA lipoprotein HMPREF9231_RS04480 PF00005 ABC transporter HMPREF9231_RS04485 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9231_RS04490 PF01964 ThiC family HMPREF9231_RS04490 PF02581 Thiamine monophosphate synthase/TENI HMPREF9231_RS04495 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HMPREF9231_RS04500 PF02824 TGS domain HMPREF9231_RS04500 PF04607 Region found in RelA / SpoT proteins HMPREF9231_RS04500 PF13291 ACT domain HMPREF9231_RS04500 PF13328 HD domain HMPREF9231_RS04505 PF00692 dUTPase HMPREF9231_RS04510 PF13834 HMPREF9231_RS04510 HMPREF9231_RS04515 PF11268 HMPREF9231_RS04515 HMPREF9231_RS04520 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase HMPREF9231_RS04525 PF00521 DNA gyrase/topoisomerase IV, subunit A HMPREF9231_RS04525 PF03989 DNA gyrase C-terminal domain, beta-propeller HMPREF9231_RS04530 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) HMPREF9231_RS04540 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) HMPREF9231_RS04540 PF13306 Leucine rich repeats (6 copies) HMPREF9231_RS04545 PF07690 Major Facilitator Superfamily HMPREF9231_RS04555 PF13274 HMPREF9231_RS04555 HMPREF9231_RS04565 PF12668 HMPREF9231_RS04565 HMPREF9231_RS04570 PF12668 HMPREF9231_RS04570 HMPREF9231_RS04575 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) HMPREF9231_RS04580 PF00204 DNA gyrase B HMPREF9231_RS04580 PF00986 DNA gyrase B subunit, carboxyl terminus HMPREF9231_RS04580 PF01751 Toprim domain HMPREF9231_RS04580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HMPREF9231_RS04585 PF00140 Sigma-70 factor, region 1 HMPREF9231_RS04585 PF04539 Sigma-70 region 3 HMPREF9231_RS04585 PF04542 Sigma-70 region 2 HMPREF9231_RS04585 PF04545 Sigma-70, region 4 HMPREF9231_RS04595 PF00348 Polyprenyl synthetase HMPREF9231_RS04600 PF00069 Protein kinase domain HMPREF9231_RS04600 PF03793 PASTA domain HMPREF9231_RS04605 PF01553 Acyltransferase HMPREF9231_RS04615 PF01043 SecA preprotein cross-linking domain HMPREF9231_RS04615 PF02810 SEC-C motif HMPREF9231_RS04615 PF07516 SecA Wing and Scaffold domain HMPREF9231_RS04615 PF07517 SecA DEAD-like domain HMPREF9231_RS04620 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HMPREF9231_RS04620 PF16321 HMPREF9231_RS04620 HMPREF9231_RS04625 PF13419 Haloacid dehalogenase-like hydrolase HMPREF9231_RS04630 PF13476 AAA domain HMPREF9231_RS04635 PF01513 ATP-NAD kinase HMPREF9231_RS04640 PF01479 S4 domain HMPREF9231_RS04640 PF01728 FtsJ-like methyltransferase HMPREF9231_RS04645 PF13242 HAD-hyrolase-like HMPREF9231_RS04645 PF13344 Haloacid dehalogenase-like hydrolase HMPREF9231_RS04655 PF00579 tRNA synthetases class I (W and Y) HMPREF9231_RS04655 PF01479 S4 domain HMPREF9231_RS04660 PF00206 Lyase HMPREF9231_RS04660 PF14698 Argininosuccinate lyase C-terminal HMPREF9231_RS04665 PF00764 Arginosuccinate synthase HMPREF9231_RS04670 PF01316 Arginine repressor, DNA binding domain HMPREF9231_RS04670 PF02863 Arginine repressor, C-terminal domain HMPREF9231_RS04675 PF01588 Putative tRNA binding domain HMPREF9231_RS04675 PF03147 Ferredoxin-fold anticodon binding domain HMPREF9231_RS04675 PF03483 B3/4 domain HMPREF9231_RS04675 PF03484 tRNA synthetase B5 domain HMPREF9231_RS04680 PF01409 tRNA synthetases class II core domain (F) HMPREF9231_RS04680 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HMPREF9231_RS04685 PF00588 SpoU rRNA Methylase family HMPREF9231_RS04690 PF01545 Cation efflux family HMPREF9231_RS04690 PF16916 HMPREF9231_RS04690 HMPREF9231_RS04695 PF01715 IPP transferase HMPREF9231_RS04700 PF13274 HMPREF9231_RS04700 HMPREF9231_RS04705 PF00128 Alpha amylase, catalytic domain HMPREF9231_RS04705 PF02806 Alpha amylase, C-terminal all-beta domain HMPREF9231_RS04710 PF00117 Glutamine amidotransferase class-I HMPREF9231_RS04710 PF00958 GMP synthase C terminal domain HMPREF9231_RS04710 PF02540 NAD synthase HMPREF9231_RS04715 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase HMPREF9231_RS04715 PF09363 XFP C-terminal domain HMPREF9231_RS04715 PF09364 XFP N-terminal domain HMPREF9231_RS04720 PF01515 Phosphate acetyl/butaryl transferase HMPREF9231_RS04725 PF00871 Acetokinase family HMPREF9231_RS04730 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HMPREF9231_RS04735 PF02361 Cobalt transport protein HMPREF9231_RS04740 PF00005 ABC transporter HMPREF9231_RS04745 PF09819 HMPREF9231_RS04745 HMPREF9231_RS04760 PF00128 Alpha amylase, catalytic domain HMPREF9231_RS04760 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HMPREF9231_RS04765 PF02021 Uncharacterised protein family UPF0102 HMPREF9231_RS04770 PF01078 Magnesium chelatase, subunit ChlI HMPREF9231_RS04770 PF13335 HMPREF9231_RS04770 HMPREF9231_RS04770 PF13541 Subunit ChlI of Mg-chelatase HMPREF9231_RS04775 PF02481 DNA recombination-mediator protein A HMPREF9231_RS04780 PF00890 FAD binding domain HMPREF9231_RS04780 PF02910 Fumarate reductase flavoprotein C-term HMPREF9231_RS04790 PF01784 NIF3 (NGG1p interacting factor 3) HMPREF9231_RS04795 PF00476 DNA polymerase family A HMPREF9231_RS04795 PF01367 5'-3' exonuclease, C-terminal SAM fold HMPREF9231_RS04795 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HMPREF9231_RS04800 PF00072 Response regulator receiver domain HMPREF9231_RS04800 PF03861 ANTAR domain HMPREF9231_RS04805 PF01040 UbiA prenyltransferase family HMPREF9231_RS04810 PF02361 Cobalt transport protein HMPREF9231_RS04815 PF00005 ABC transporter HMPREF9231_RS04835 PF02110 Hydroxyethylthiazole kinase family HMPREF9231_RS04835 PF02581 Thiamine monophosphate synthase/TENI HMPREF9231_RS04845 PF00005 ABC transporter HMPREF9231_RS04845 PF02361 Cobalt transport protein HMPREF9231_RS04850 PF01546 Peptidase family M20/M25/M40 HMPREF9231_RS04850 PF07687 Peptidase dimerisation domain HMPREF9231_RS04855 PF11241 HMPREF9231_RS04855 HMPREF9231_RS04860 PF13829 HMPREF9231_RS04860 HMPREF9231_RS04865 PF01451 Low molecular weight phosphotyrosine protein phosphatase HMPREF9231_RS04870 PF00186 Dihydrofolate reductase HMPREF9231_RS04875 PF00303 Thymidylate synthase HMPREF9231_RS04880 PF02566 OsmC-like protein HMPREF9231_RS04885 PF00534 Glycosyl transferases group 1 HMPREF9231_RS04885 PF13439 Glycosyltransferase Family 4 HMPREF9231_RS04890 PF00582 Universal stress protein family HMPREF9231_RS04895 PF00877 NlpC/P60 family HMPREF9231_RS04900 PF05257 CHAP domain HMPREF9231_RS04910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HMPREF9231_RS04915 PF01895 PhoU domain HMPREF9231_RS04920 PF00300 Histidine phosphatase superfamily (branch 1) HMPREF9231_RS04925 PF00152 tRNA synthetases class II (D, K and N) HMPREF9231_RS04925 PF01336 OB-fold nucleic acid binding domain HMPREF9231_RS04935 PF13228 HMPREF9231_RS04935 HMPREF9231_RS04935 PF13424 Tetratricopeptide repeat HMPREF9231_RS04940 PF13526 HMPREF9231_RS04940 HMPREF9231_RS04950 PF01883 Domain of unknown function DUF59 HMPREF9231_RS04955 PF01592 NifU-like N terminal domain HMPREF9231_RS04960 PF00266 Aminotransferase class-V HMPREF9231_RS04965 PF00056 lactate/malate dehydrogenase, NAD binding domain HMPREF9231_RS04965 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HMPREF9231_RS04970 PF01926 50S ribosome-binding GTPase HMPREF9231_RS04970 PF13167 HMPREF9231_RS04970 HMPREF9231_RS04970 PF16360 HMPREF9231_RS04970 HMPREF9231_RS04975 PF05175 Methyltransferase small domain HMPREF9231_RS04980 PF00270 DEAD/DEAH box helicase HMPREF9231_RS04980 PF00271 Helicase conserved C-terminal domain HMPREF9231_RS04980 PF04408 Helicase associated domain (HA2) HMPREF9231_RS04980 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HMPREF9231_RS04980 PF11898 HMPREF9231_RS04980 HMPREF9231_RS04985 PF07690 Major Facilitator Superfamily HMPREF9231_RS04990 PF01156 Inosine-uridine preferring nucleoside hydrolase HMPREF9231_RS04995 PF00120 Glutamine synthetase, catalytic domain HMPREF9231_RS04995 PF03951 Glutamine synthetase, beta-Grasp domain HMPREF9231_RS05005 PF01336 OB-fold nucleic acid binding domain HMPREF9231_RS05005 PF02811 PHP domain HMPREF9231_RS05005 PF07733 Bacterial DNA polymerase III alpha subunit HMPREF9231_RS05005 PF14579 Helix-hairpin-helix motif HMPREF9231_RS05010 PF00849 RNA pseudouridylate synthase HMPREF9231_RS05015 PF01252 HMPREF9231_RS05015 HMPREF9231_RS05020 PF05103 DivIVA protein HMPREF9231_RS05025 PF02325 HMPREF9231_RS05025 HMPREF9231_RS05030 PF04472 Protein of unknown function (DUF552) HMPREF9231_RS05035 PF00091 Tubulin/FtsZ family, GTPase domain HMPREF9231_RS05035 PF12327 FtsZ family, C-terminal domain HMPREF9231_RS05040 PF01207 Dihydrouridine synthase (Dus) HMPREF9231_RS05045 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HMPREF9231_RS05045 PF03129 Anticodon binding domain HMPREF9231_RS05050 PF01910 Domain of unknown function DUF77 HMPREF9231_RS05055 PF01546 Peptidase family M20/M25/M40 HMPREF9231_RS05055 PF07687 Peptidase dimerisation domain HMPREF9231_RS05060 PF01255 Putative undecaprenyl diphosphate synthase HMPREF9231_RS05065 PF01636 Phosphotransferase enzyme family HMPREF9231_RS05070 PF09084 NMT1/THI5 like HMPREF9231_RS05075 PF09819 HMPREF9231_RS05075 HMPREF9231_RS05080 PF02565 Recombination protein O C terminal HMPREF9231_RS05080 PF11967 Recombination protein O N terminal HMPREF9231_RS05095 PF04203 Sortase family HMPREF9231_RS05100 PF05738 Cna protein B-type domain HMPREF9231_RS05110 PF05362 Lon protease (S16) C-terminal proteolytic domain HMPREF9231_RS05115 PF10103 Uncharacterised conserved protein (DUF2342) HMPREF9231_RS05120 PF00580 UvrD/REP helicase N-terminal domain HMPREF9231_RS05120 PF13361 UvrD-like helicase C-terminal domain HMPREF9231_RS05130 PF11305 HMPREF9231_RS05130 HMPREF9231_RS05135 PF02811 PHP domain HMPREF9231_RS05140 PF07884 Vitamin K epoxide reductase family HMPREF9231_RS05145 PF01177 Asp/Glu/Hydantoin racemase HMPREF9231_RS05150 PF00005 ABC transporter HMPREF9231_RS05150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HMPREF9231_RS05155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HMPREF9231_RS05160 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9231_RS05165 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9231_RS05170 PF00133 tRNA synthetases class I (I, L, M and V) HMPREF9231_RS05170 PF08264 Anticodon-binding domain of tRNA HMPREF9231_RS05180 PF02609 Exonuclease VII small subunit HMPREF9231_RS05185 PF02601 HMPREF9231_RS05185 HMPREF9231_RS05185 PF13742 HMPREF9231_RS05185 HMPREF9231_RS05190 PF00082 Subtilase family HMPREF9231_RS05190 PF02225 PA domain HMPREF9231_RS05190 PF06280 Fn3-like domain (DUF1034) HMPREF9231_RS05200 PF00009 Elongation factor Tu GTP binding domain HMPREF9231_RS05200 PF03143 Elongation factor Tu C-terminal domain HMPREF9231_RS05200 PF03144 Elongation factor Tu domain 2 HMPREF9231_RS05205 PF00009 Elongation factor Tu GTP binding domain HMPREF9231_RS05205 PF00679 Elongation factor G C-terminus HMPREF9231_RS05205 PF03144 Elongation factor Tu domain 2 HMPREF9231_RS05205 PF03764 Elongation factor G, domain IV HMPREF9231_RS05205 PF14492 Elongation Factor G, domain II HMPREF9231_RS05210 PF00177 Ribosomal protein S7p/S5e HMPREF9231_RS05215 PF00164 Ribosomal protein S12/S23 HMPREF9231_RS05220 PF08478 POTRA domain, FtsQ-type HMPREF9231_RS05225 PF01225 Mur ligase family, catalytic domain HMPREF9231_RS05225 PF02875 Mur ligase family, glutamate ligase domain HMPREF9231_RS05225 PF08245 Mur ligase middle domain HMPREF9231_RS05230 PF03033 Glycosyltransferase family 28 N-terminal domain HMPREF9231_RS05230 PF04101 Glycosyltransferase family 28 C-terminal domain HMPREF9231_RS05235 PF01098 HMPREF9231_RS05235 HMPREF9231_RS05240 PF08245 Mur ligase middle domain HMPREF9231_RS05245 PF00953 Glycosyl transferase family 4 HMPREF9231_RS05245 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HMPREF9231_RS05250 PF01225 Mur ligase family, catalytic domain HMPREF9231_RS05250 PF02875 Mur ligase family, glutamate ligase domain HMPREF9231_RS05250 PF08245 Mur ligase middle domain HMPREF9231_RS05260 PF00905 Penicillin binding protein transpeptidase domain HMPREF9231_RS05260 PF03717 Penicillin-binding Protein dimerisation domain HMPREF9231_RS05270 PF01795 MraW methylase family HMPREF9231_RS05275 PF02381 MraZ protein HMPREF9231_RS05280 PF13245 Part of AAA domain HMPREF9231_RS05280 PF13361 UvrD-like helicase C-terminal domain HMPREF9231_RS05285 PF03477 ATP cone domain HMPREF9231_RS05295 PF01476 LysM domain HMPREF9231_RS05300 PF00717 Peptidase S24-like HMPREF9231_RS05300 PF01726 LexA DNA binding domain HMPREF9231_RS05305 PF01272 Transcription elongation factor, GreA/GreB, C-term HMPREF9231_RS05305 PF03449 Transcription elongation factor, N-terminal HMPREF9231_RS05310 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HMPREF9231_RS05315 PF03313 HMPREF9231_RS05315 HMPREF9231_RS05315 PF03315 Serine dehydratase beta chain HMPREF9231_RS05320 PF00122 E1-E2 ATPase HMPREF9231_RS05320 PF00702 haloacid dehalogenase-like hydrolase HMPREF9231_RS05330 PF00356 Bacterial regulatory proteins, lacI family HMPREF9231_RS05330 PF13377 Periplasmic binding protein-like domain HMPREF9231_RS05335 PF01055 Glycosyl hydrolases family 31 HMPREF9231_RS05340 PF13416 Bacterial extracellular solute-binding protein HMPREF9231_RS05345 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9231_RS05350 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9231_RS05355 PF01468 GA module HMPREF9231_RS05355 PF07554 Uncharacterised Sugar-binding Domain HMPREF9231_RS05360 PF02388 FemAB family HMPREF9231_RS05365 PF00005 ABC transporter HMPREF9231_RS05365 PF12848 ABC transporter HMPREF9231_RS05370 PF11377 HMPREF9231_RS05370 HMPREF9231_RS05380 PF00004 ATPase family associated with various cellular activities (AAA) HMPREF9231_RS05380 PF01434 Peptidase family M41 HMPREF9231_RS05385 PF00156 Phosphoribosyl transferase domain HMPREF9231_RS05390 PF01171 PP-loop family HMPREF9231_RS05390 PF09179 TilS substrate binding domain HMPREF9231_RS05395 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family HMPREF9231_RS05405 PF00005 ABC transporter HMPREF9231_RS05410 PF13641 Glycosyltransferase like family 2 HMPREF9231_RS05415 PF01594 HMPREF9231_RS05415 HMPREF9231_RS05420 PF00120 Glutamine synthetase, catalytic domain HMPREF9231_RS05420 PF03951 Glutamine synthetase, beta-Grasp domain HMPREF9231_RS05425 PF01327 Polypeptide deformylase HMPREF9231_RS05430 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HMPREF9231_RS05430 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HMPREF9231_RS05430 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HMPREF9231_RS05430 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HMPREF9231_RS05440 PF02390 Putative methyltransferase HMPREF9231_RS05455 PF00005 ABC transporter HMPREF9231_RS05455 PF00664 ABC transporter transmembrane region HMPREF9231_RS05460 PF00005 ABC transporter HMPREF9231_RS05460 PF00664 ABC transporter transmembrane region HMPREF9231_RS05465 PF13353 4Fe-4S single cluster domain HMPREF9231_RS05470 PF03477 ATP cone domain HMPREF9231_RS05470 PF13597 Anaerobic ribonucleoside-triphosphate reductase HMPREF9231_RS05475 PF11253 HMPREF9231_RS05475 HMPREF9231_RS05480 PF00270 DEAD/DEAH box helicase HMPREF9231_RS05480 PF00271 Helicase conserved C-terminal domain HMPREF9231_RS05485 PF00455 HMPREF9231_RS05485 HMPREF9231_RS05485 PF08220 DeoR-like helix-turn-helix domain HMPREF9231_RS05490 PF07690 Major Facilitator Superfamily HMPREF9231_RS05495 PF03990 HMPREF9231_RS05495 HMPREF9231_RS05495 PF07501 G5 domain HMPREF9231_RS05500 PF00085 Thioredoxin HMPREF9231_RS05505 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HMPREF9231_RS05505 PF02403 Seryl-tRNA synthetase N-terminal domain HMPREF9231_RS05510 PF03275 UDP-galactopyranose mutase HMPREF9231_RS05510 PF13450 NAD(P)-binding Rossmann-like domain HMPREF9231_RS05515 PF00535 Glycosyl transferase family 2 HMPREF9231_RS05520 PF00535 Glycosyl transferase family 2 HMPREF9231_RS05520 PF13632 Glycosyl transferase family group 2 HMPREF9231_RS05525 PF01757 HMPREF9231_RS05525 HMPREF9231_RS05530 PF05045 HMPREF9231_RS05530 HMPREF9231_RS05535 PF00535 Glycosyl transferase family 2 HMPREF9231_RS05540 PF14264 HMPREF9231_RS05540 HMPREF9231_RS05545 PF00535 Glycosyl transferase family 2 HMPREF9231_RS05550 PF01370 NAD dependent epimerase/dehydratase family HMPREF9231_RS05555 PF01061 HMPREF9231_RS05555 HMPREF9231_RS05560 PF00005 ABC transporter HMPREF9231_RS05565 PF16363 HMPREF9231_RS05565 HMPREF9231_RS05570 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HMPREF9231_RS05570 PF04321 RmlD substrate binding domain HMPREF9231_RS05575 PF00483 Nucleotidyl transferase HMPREF9231_RS05580 PF01725 Ham1 family HMPREF9231_RS05585 PF01138 3' exoribonuclease family, domain 1 HMPREF9231_RS05585 PF03725 3' exoribonuclease family, domain 2 HMPREF9231_RS05590 PF00005 ABC transporter HMPREF9231_RS05590 PF12848 ABC transporter HMPREF9231_RS05590 PF16326 HMPREF9231_RS05590 HMPREF9231_RS05595 PF01180 Dihydroorotate dehydrogenase HMPREF9231_RS05600 PF00905 Penicillin binding protein transpeptidase domain HMPREF9231_RS05600 PF00912 Transglycosylase HMPREF9231_RS05605 PF00027 Cyclic nucleotide-binding domain HMPREF9231_RS05605 PF13545 Crp-like helix-turn-helix domain HMPREF9231_RS05610 PF00326 Prolyl oligopeptidase family HMPREF9231_RS05610 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain HMPREF9231_RS05615 PF09949 HMPREF9231_RS05615 HMPREF9231_RS05620 PF03734 L,D-transpeptidase catalytic domain HMPREF9231_RS05625 PF00781 Diacylglycerol kinase catalytic domain HMPREF9231_RS05630 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HMPREF9231_RS05630 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HMPREF9231_RS05630 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HMPREF9231_RS05630 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HMPREF9231_RS05635 PF00075 RNase H HMPREF9231_RS05640 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HMPREF9231_RS05655 PF13481 AAA domain HMPREF9231_RS05660 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain HMPREF9231_RS05660 PF05221 S-adenosyl-L-homocysteine hydrolase HMPREF9231_RS05665 PF01979 Amidohydrolase family HMPREF9231_RS05670 PF06172 Cupin superfamily (DUF985) HMPREF9231_RS05675 PF01048 Phosphorylase superfamily HMPREF9231_RS05680 PF00497 Bacterial extracellular solute-binding proteins, family 3 HMPREF9231_RS05685 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9231_RS05690 PF00005 ABC transporter HMPREF9231_RS05695 PF00248 Aldo/keto reductase family HMPREF9231_RS05700 PF02610 L-arabinose isomerase HMPREF9231_RS05700 PF11762 L-arabinose isomerase C-terminal domain HMPREF9231_RS05705 PF00596 Class II Aldolase and Adducin N-terminal domain HMPREF9231_RS05710 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HMPREF9231_RS05710 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HMPREF9231_RS05720 PF02653 HMPREF9231_RS05720 HMPREF9231_RS05725 PF00005 ABC transporter HMPREF9231_RS05730 PF13407 Periplasmic binding protein domain HMPREF9231_RS05735 PF00480 ROK family HMPREF9231_RS05735 PF13412 Winged helix-turn-helix DNA-binding HMPREF9231_RS05740 PF00005 ABC transporter HMPREF9231_RS05765 PF13556 PucR C-terminal helix-turn-helix domain HMPREF9231_RS05770 PF00687 Ribosomal protein L1p/L10e family HMPREF9231_RS05775 PF00298 Ribosomal protein L11, RNA binding domain HMPREF9231_RS05775 PF03946 Ribosomal protein L11, N-terminal domain HMPREF9231_RS05780 PF00542 Ribosomal protein L7/L12 C-terminal domain HMPREF9231_RS05780 PF16320 HMPREF9231_RS05780 HMPREF9231_RS05785 PF00466 Ribosomal protein L10 HMPREF9231_RS05790 PF00860 Permease family HMPREF9231_RS05795 PF00005 ABC transporter HMPREF9231_RS05800 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9231_RS05805 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9231_RS05810 PF12849 PBP superfamily domain HMPREF9231_RS05815 PF01048 Phosphorylase superfamily HMPREF9231_RS05825 PF00793 DAHP synthetase I family HMPREF9231_RS05830 PF01687 Riboflavin kinase HMPREF9231_RS05830 PF06574 FAD synthetase HMPREF9231_RS05835 PF01509 TruB family pseudouridylate synthase (N terminal domain) HMPREF9231_RS05835 PF16198 HMPREF9231_RS05835 HMPREF9231_RS05840 PF02033 Ribosome-binding factor A HMPREF9231_RS05845 PF00009 Elongation factor Tu GTP binding domain HMPREF9231_RS05845 PF04760 Translation initiation factor IF-2, N-terminal region HMPREF9231_RS05845 PF11987 Translation-initiation factor 2 HMPREF9231_RS05850 PF08529 NusA N-terminal domain HMPREF9231_RS05850 PF13184 NusA-like KH domain HMPREF9231_RS05860 PF03051 Peptidase C1-like family HMPREF9231_RS05870 PF01470 Pyroglutamyl peptidase HMPREF9231_RS05875 PF02578 Multi-copper polyphenol oxidoreductase laccase HMPREF9231_RS05880 PF00248 Aldo/keto reductase family HMPREF9231_RS05885 PF00013 KH domain HMPREF9231_RS05885 PF00575 S1 RNA binding domain HMPREF9231_RS05885 PF01138 3' exoribonuclease family, domain 1 HMPREF9231_RS05885 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HMPREF9231_RS05890 PF00312 Ribosomal protein S15 HMPREF9231_RS05895 PF09335 HMPREF9231_RS05895 HMPREF9231_RS05910 PF00069 Protein kinase domain HMPREF9231_RS05915 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HMPREF9231_RS05920 PF00149 Calcineurin-like phosphoesterase HMPREF9231_RS05925 PF02357 Transcription termination factor nusG HMPREF9231_RS05930 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HMPREF9231_RS05940 PF00155 Aminotransferase class I and II HMPREF9231_RS05945 PF00696 Amino acid kinase family HMPREF9231_RS05945 PF01472 PUA domain HMPREF9231_RS05950 PF01018 GTP1/OBG HMPREF9231_RS05950 PF01926 50S ribosome-binding GTPase HMPREF9231_RS05950 PF09269 Domain of unknown function (DUF1967) HMPREF9231_RS05955 PF01016 Ribosomal L27 protein HMPREF9231_RS05960 PF00829 Ribosomal prokaryotic L21 protein HMPREF9231_RS05965 PF10150 Ribonuclease E/G family HMPREF9231_RS05970 PF03547 HMPREF9231_RS05970 HMPREF9231_RS05980 PF04383 KilA-N domain HMPREF9231_RS05985 PF00293 NUDIX domain HMPREF9231_RS05985 PF02545 Maf-like protein HMPREF9231_RS05990 PF00288 GHMP kinases N terminal domain HMPREF9231_RS05990 PF08544 GHMP kinases C terminal HMPREF9231_RS05995 PF00742 Homoserine dehydrogenase HMPREF9231_RS05995 PF03447 Homoserine dehydrogenase, NAD binding domain HMPREF9231_RS06000 PF02517 CAAX protease self-immunity HMPREF9231_RS06005 PF01820 D-ala D-ala ligase N-terminus HMPREF9231_RS06005 PF07478 D-ala D-ala ligase C-terminus HMPREF9231_RS06010 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HMPREF9231_RS06010 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HMPREF9231_RS06015 PF01553 Acyltransferase HMPREF9231_RS06020 PF00950 HMPREF9231_RS06020 HMPREF9231_RS06025 PF00005 ABC transporter HMPREF9231_RS06030 PF01297 Periplasmic solute binding protein family HMPREF9231_RS06050 PF00857 Isochorismatase family HMPREF9231_RS06075 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HMPREF9231_RS06075 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HMPREF9231_RS06080 PF02447 HMPREF9231_RS06080 HMPREF9231_RS06085 PF01202 Shikimate kinase HMPREF9231_RS06090 PF00392 Bacterial regulatory proteins, gntR family HMPREF9231_RS06090 PF07729 FCD domain HMPREF9231_RS06095 PF01966 HD domain HMPREF9231_RS06100 PF02705 HMPREF9231_RS06100 HMPREF9231_RS06105 PF01026 TatD related DNase HMPREF9231_RS06110 PF00005 ABC transporter HMPREF9231_RS06110 PF00664 ABC transporter transmembrane region HMPREF9231_RS06115 PF00005 ABC transporter HMPREF9231_RS06115 PF00664 ABC transporter transmembrane region HMPREF9231_RS06120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HMPREF9231_RS06125 PF00005 ABC transporter HMPREF9231_RS06125 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HMPREF9231_RS06130 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9231_RS06130 PF12911 HMPREF9231_RS06130 HMPREF9231_RS06135 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9231_RS06140 PF03051 Peptidase C1-like family HMPREF9231_RS06145 PF08264 Anticodon-binding domain of tRNA HMPREF9231_RS06145 PF09334 tRNA synthetases class I (M) HMPREF9231_RS06160 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HMPREF9231_RS06165 PF07859 alpha/beta hydrolase fold HMPREF9231_RS06175 PF05738 Cna protein B-type domain HMPREF9231_RS06180 PF01268 Formate--tetrahydrofolate ligase HMPREF9231_RS06185 PF03577 HMPREF9231_RS06185 HMPREF9231_RS06190 PF01161 Phosphatidylethanolamine-binding protein HMPREF9231_RS06195 PF13177 DNA polymerase III, delta subunit HMPREF9231_RS06200 PF02223 Thymidylate kinase HMPREF9231_RS06205 PF01131 DNA topoisomerase HMPREF9231_RS06205 PF01751 Toprim domain HMPREF9231_RS06205 PF13368 HMPREF9231_RS06205 HMPREF9231_RS06215 PF01658 Myo-inositol-1-phosphate synthase HMPREF9231_RS06220 PF00905 Penicillin binding protein transpeptidase domain HMPREF9231_RS06220 PF00912 Transglycosylase HMPREF9231_RS06225 PF13419 Haloacid dehalogenase-like hydrolase HMPREF9231_RS06230 PF13411 MerR HTH family regulatory protein HMPREF9231_RS06235 PF00226 DnaJ domain HMPREF9231_RS06235 PF01556 DnaJ C terminal domain HMPREF9231_RS06240 PF01025 GrpE HMPREF9231_RS06245 PF00012 Hsp70 protein HMPREF9231_RS06250 PF00899 ThiF family HMPREF9231_RS06255 PF05690 Thiazole biosynthesis protein ThiG HMPREF9231_RS06260 PF02597 ThiS family HMPREF9231_RS06265 PF01266 FAD dependent oxidoreductase HMPREF9231_RS06270 PF07554 Uncharacterised Sugar-binding Domain HMPREF9231_RS06275 PF01055 Glycosyl hydrolases family 31 HMPREF9231_RS06280 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9231_RS06285 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9231_RS06290 PF13416 Bacterial extracellular solute-binding protein HMPREF9231_RS06295 PF00356 Bacterial regulatory proteins, lacI family HMPREF9231_RS06295 PF13377 Periplasmic binding protein-like domain HMPREF9231_RS06300 PF05857 HMPREF9231_RS06300 HMPREF9231_RS06305 PF00128 Alpha amylase, catalytic domain HMPREF9231_RS06310 PF13416 Bacterial extracellular solute-binding protein HMPREF9231_RS06315 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9231_RS06320 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9231_RS06325 PF00128 Alpha amylase, catalytic domain HMPREF9231_RS06325 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HMPREF9231_RS06330 PF00872 HMPREF9231_RS06330 HMPREF9231_RS06335 PF14561 Tetratricopeptide repeat HMPREF9231_RS06350 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HMPREF9231_RS06355 PF01939 Protein of unknown function DUF91 HMPREF9231_RS06360 PF00324 Amino acid permease HMPREF9231_RS06365 PF02687 HMPREF9231_RS06365 HMPREF9231_RS06370 PF00005 ABC transporter HMPREF9231_RS06380 PF01118 Semialdehyde dehydrogenase, NAD binding domain HMPREF9231_RS06380 PF02774 Semialdehyde dehydrogenase, dimerisation domain HMPREF9231_RS06385 PF01842 ACT domain HMPREF9231_RS06385 PF13840 ACT domain HMPREF9231_RS06390 PF00696 Amino acid kinase family HMPREF9231_RS06395 PF02132 RecR protein HMPREF9231_RS06395 PF13662 Toprim domain HMPREF9231_RS06400 PF12169 DNA polymerase III subunits gamma and tau domain III HMPREF9231_RS06400 PF13177 DNA polymerase III, delta subunit HMPREF9231_RS06410 PF07811 HMPREF9231_RS06410 HMPREF9231_RS06415 PF14029 HMPREF9231_RS06415 HMPREF9231_RS06420 PF00482 Type II secretion system (T2SS), protein F HMPREF9231_RS06430 PF00437 Type II/IV secretion system protein HMPREF9231_RS06440 PF00654 Voltage gated chloride channel HMPREF9231_RS06445 PF02537 HMPREF9231_RS06445 HMPREF9231_RS06450 PF02537 HMPREF9231_RS06450 HMPREF9231_RS06455 PF00709 Adenylosuccinate synthetase HMPREF9231_RS06460 PF01116 Fructose-bisphosphate aldolase class-II HMPREF9231_RS06465 PF01817 Chorismate mutase type II HMPREF9231_RS06470 PF01037 AsnC family HMPREF9231_RS06470 PF13404 AsnC-type helix-turn-helix domain HMPREF9231_RS06475 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HMPREF9231_RS06475 PF07497 Rho termination factor, RNA-binding domain HMPREF9231_RS06475 PF07498 Rho termination factor, N-terminal domain HMPREF9231_RS06480 PF01593 Flavin containing amine oxidoreductase HMPREF9231_RS06485 PF10611 HMPREF9231_RS06485 HMPREF9231_RS06490 PF13302 Acetyltransferase (GNAT) domain HMPREF9231_RS06495 PF02637 GatB domain HMPREF9231_RS06495 PF02934 GatB/GatE catalytic domain HMPREF9231_RS06500 PF01425 Amidase HMPREF9231_RS06505 PF02686 Glu-tRNAGln amidotransferase C subunit HMPREF9231_RS06510 PF01289 Thiol-activated cytolysin HMPREF9231_RS06515 PF12679 HMPREF9231_RS06515 HMPREF9231_RS06520 PF00005 ABC transporter HMPREF9231_RS06525 PF00588 SpoU rRNA Methylase family HMPREF9231_RS06535 PF02646 HMPREF9231_RS06535 HMPREF9231_RS06550 PF00005 ABC transporter HMPREF9231_RS06555 PF00004 ATPase family associated with various cellular activities (AAA) HMPREF9231_RS06555 PF02861 Clp amino terminal domain HMPREF9231_RS06555 PF07724 AAA domain (Cdc48 subfamily) HMPREF9231_RS06555 PF10431 C-terminal, D2-small domain, of ClpB protein HMPREF9231_RS06560 PF01557 Fumarylacetoacetate (FAA) hydrolase family HMPREF9231_RS06560 PF10370 Domain of unknown function (DUF2437) HMPREF9231_RS06565 PF01168 Alanine racemase, N-terminal domain HMPREF9231_RS06570 PF00749 tRNA synthetases class I (E and Q), catalytic domain HMPREF9231_RS06575 PF00230 Major intrinsic protein HMPREF9231_RS06580 PF02503 Polyphosphate kinase middle domain HMPREF9231_RS06580 PF13089 Polyphosphate kinase N-terminal domain HMPREF9231_RS06580 PF13090 Polyphosphate kinase C-terminal domain HMPREF9231_RS06585 PF02976 DNA mismatch repair enzyme MutH HMPREF9231_RS06590 PF00145 C-5 cytosine-specific DNA methylase HMPREF9231_RS06595 PF00293 NUDIX domain HMPREF9231_RS06595 PF00300 Histidine phosphatase superfamily (branch 1) HMPREF9231_RS06605 PF14681 Uracil phosphoribosyltransferase HMPREF9231_RS06615 PF12671 HMPREF9231_RS06615 HMPREF9231_RS06620 PF15919 HMPREF9231_RS06620 HMPREF9231_RS06625 PF07927 YcfA-like protein HMPREF9231_RS06630 PF07685 CobB/CobQ-like glutamine amidotransferase domain HMPREF9231_RS06635 PF08245 Mur ligase middle domain HMPREF9231_RS06635 PF08353 HMPREF9231_RS06635 HMPREF9231_RS06640 PF00772 DnaB-like helicase N terminal domain HMPREF9231_RS06640 PF03796 DnaB-like helicase C terminal domain HMPREF9231_RS06645 PF01554 MatE HMPREF9231_RS06650 PF00909 Ammonium Transporter Family HMPREF9231_RS06655 PF00448 SRP54-type protein, GTPase domain HMPREF9231_RS06655 PF02881 SRP54-type protein, helical bundle domain HMPREF9231_RS06660 PF00462 Glutaredoxin HMPREF9231_RS06670 PF01547 Bacterial extracellular solute-binding protein HMPREF9231_RS06675 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9231_RS06680 PF00528 Binding-protein-dependent transport system inner membrane component HMPREF9231_RS06685 PF00703 Glycosyl hydrolases family 2 HMPREF9231_RS06685 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HMPREF9231_RS06685 PF02837 Glycosyl hydrolases family 2, sugar binding domain HMPREF9231_RS06685 PF02929 Beta galactosidase small chain HMPREF9231_RS06685 PF16353 HMPREF9231_RS06685 HMPREF9231_RS06690 PF01120 Alpha-L-fucosidase HMPREF9231_RS06695 PF00754 F5/8 type C domain HMPREF9231_RS06695 PF12733 HMPREF9231_RS06695 HMPREF9231_RS06700 PF05025 RbsD / FucU transport protein family HMPREF9231_RS06705 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family HMPREF9231_RS06705 PF13224 HMPREF9231_RS06705 HMPREF9231_RS06710 PF00005 ABC transporter HMPREF9231_RS06715 PF00069 Protein kinase domain HMPREF9231_RS06720 PF13462 Thioredoxin HMPREF9231_RS06735 PF03990 HMPREF9231_RS06735 HMPREF9231_RS06735 PF07501 G5 domain HMPREF9231_RS06740 PF00398 Ribosomal RNA adenine dimethylase HMPREF9231_RS06745 PF13399 LytR cell envelope-related transcriptional attenuator HMPREF9231_RS06750 PF01743 Poly A polymerase head domain HMPREF9231_RS06750 PF01966 HD domain HMPREF9231_RS06750 PF12627 Probable RNA and SrmB- binding site of polymerase A HMPREF9231_RS06755 PF00293 NUDIX domain HMPREF9231_RS06765 PF03023 HMPREF9231_RS06765 HMPREF9231_RS06775 PF07992 Pyridine nucleotide-disulphide oxidoreductase HMPREF9231_RS06780 PF02195 ParB-like nuclease domain HMPREF9231_RS06785 PF13614 AAA domain HMPREF9231_RS06790 PF02527 rRNA small subunit methyltransferase G HMPREF9231_RS06795 PF01424 R3H domain HMPREF9231_RS06800 PF02096 60Kd inner membrane protein HMPREF9231_RS06805 PF00825 Ribonuclease P HMPREF9231_RS06810 PF00468 Ribosomal protein L34