Gferi_RS00010 SM00422 helix_turn_helix, mercury resistance Gferi_RS00015 SM00138 Methyltransferase, chemotaxis proteins Gferi_RS00020 SM00316 Ribosomal protein S1-like RNA-binding domain Gferi_RS00025 SM00563 Phosphate acyltransferases Gferi_RS00045 SM00855 Phosphoglycerate mutase family Gferi_RS00050 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Gferi_RS00105 SM00363 S4 RNA-binding domain Gferi_RS00120 SM00936 Penicillin-binding protein 5, C-terminal domain Gferi_RS00140 SM00530 Helix-turn-helix XRE-family like proteins Gferi_RS00165 SM00936 Penicillin-binding protein 5, C-terminal domain Gferi_RS00170 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain Gferi_RS00220 SM00448 cheY-homologous receiver domain Gferi_RS00225 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Gferi_RS00240 SM00363 S4 RNA-binding domain Gferi_RS00245 SM00861 Transketolase, pyrimidine binding domain Gferi_RS00340 SM00382 ATPases associated with a variety of cellular activities Gferi_RS00350 SM00841 Elongation factor P, C-terminal Gferi_RS00350 SM01185 Gferi_RS00350 Gferi_RS00385 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Gferi_RS00385 SM00091 PAS domain Gferi_RS00385 SM00267 diguanylate cyclase Gferi_RS00385 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Gferi_RS00400 SM00842 Cell division protein FtsA Gferi_RS00450 SM00382 ATPases associated with a variety of cellular activities Gferi_RS00495 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS00495 SM00387 Histidine kinase-like ATPases Gferi_RS00495 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS00500 SM00448 cheY-homologous receiver domain Gferi_RS00500 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS00525 SM00448 cheY-homologous receiver domain Gferi_RS00525 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS00530 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS00530 SM00387 Histidine kinase-like ATPases Gferi_RS00530 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS00550 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain Gferi_RS00590 SM00091 PAS domain Gferi_RS00590 SM00116 Domain in cystathionine beta-synthase and other proteins. Gferi_RS00590 SM00382 ATPases associated with a variety of cellular activities Gferi_RS00600 SM00998 Adenylosuccinate lyase C-terminus Gferi_RS00610 SM00481 DNA polymerase alpha chain like domain Gferi_RS00620 SM00322 K homology RNA-binding domain Gferi_RS00620 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Gferi_RS00630 SM00382 ATPases associated with a variety of cellular activities Gferi_RS00635 SM00852 Probable molybdopterin binding domain Gferi_RS00645 SM00729 Elongator protein 3, MiaB family, Radical SAM Gferi_RS00650 SM00450 Rhodanese Homology Domain Gferi_RS00655 SM00382 ATPases associated with a variety of cellular activities Gferi_RS00655 SM00843 Gferi_RS00655 Gferi_RS00690 SM00316 Ribosomal protein S1-like RNA-binding domain Gferi_RS00690 SM00322 K homology RNA-binding domain Gferi_RS00695 SM01387 Gferi_RS00695 Gferi_RS00700 SM00904 Riboflavin kinase Gferi_RS00735 SM00316 Ribosomal protein S1-like RNA-binding domain Gferi_RS00745 SM00479 Gferi_RS00745 Gferi_RS00745 SM00481 DNA polymerase alpha chain like domain Gferi_RS00760 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Gferi_RS00845 SM00260 Two component signalling adaptor domain Gferi_RS00850 SM00073 Histidine Phosphotransfer domain Gferi_RS00850 SM00260 Two component signalling adaptor domain Gferi_RS00850 SM00387 Histidine kinase-like ATPases Gferi_RS00850 SM01231 Gferi_RS00850 Gferi_RS00855 SM00448 cheY-homologous receiver domain Gferi_RS00870 SM00382 ATPases associated with a variety of cellular activities Gferi_RS00870 SM00962 SRP54-type protein, GTPase domain Gferi_RS00905 SM00448 cheY-homologous receiver domain Gferi_RS00970 SM00382 ATPases associated with a variety of cellular activities Gferi_RS01010 SM00382 ATPases associated with a variety of cellular activities Gferi_RS01010 SM01086 C-terminal, D2-small domain, of ClpB protein Gferi_RS01020 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Gferi_RS01020 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Gferi_RS01020 SM00493 Gferi_RS01020 Gferi_RS01035 SM00530 Helix-turn-helix XRE-family like proteins Gferi_RS01095 SM00318 Staphylococcal nuclease homologues Gferi_RS01230 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Gferi_RS01255 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain Gferi_RS01345 SM00858 Gferi_RS01345 Gferi_RS01435 SM00530 Helix-turn-helix XRE-family like proteins Gferi_RS01440 SM00530 Helix-turn-helix XRE-family like proteins Gferi_RS01445 SM00530 Helix-turn-helix XRE-family like proteins Gferi_RS01460 SM00857 Resolvase, N terminal domain Gferi_RS01525 SM00382 ATPases associated with a variety of cellular activities Gferi_RS01525 SM00962 SRP54-type protein, GTPase domain Gferi_RS01525 SM00963 SRP54-type protein, helical bundle domain Gferi_RS01535 SM00382 ATPases associated with a variety of cellular activities Gferi_RS01535 SM00962 SRP54-type protein, GTPase domain Gferi_RS01535 SM00963 SRP54-type protein, helical bundle domain Gferi_RS01540 SM00968 SMC proteins Flexible Hinge Domain Gferi_RS01545 SM00729 Elongator protein 3, MiaB family, Radical SAM Gferi_RS01550 SM00358 Double-stranded RNA binding motif Gferi_RS01550 SM00535 Ribonuclease III family Gferi_RS01555 SM00825 Beta-ketoacyl synthase Gferi_RS01565 SM00822 Gferi_RS01565 Gferi_RS01570 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Gferi_RS01615 SM00849 Metallo-beta-lactamase superfamily Gferi_RS01645 SM00487 DEAD-like helicases superfamily Gferi_RS01645 SM00490 helicase superfamily c-terminal domain Gferi_RS01650 SM01120 Gferi_RS01650 Gferi_RS01650 SM01121 Gferi_RS01650 Gferi_RS01665 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain Gferi_RS01680 SM00220 Serine/Threonine protein kinases, catalytic domain Gferi_RS01680 SM00740 Gferi_RS01680 Gferi_RS01685 SM00331 Sigma factor PP2C-like phosphatases Gferi_RS01685 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Gferi_RS01715 SM00487 DEAD-like helicases superfamily Gferi_RS01715 SM00490 helicase superfamily c-terminal domain Gferi_RS01725 SM01409 Gferi_RS01725 Gferi_RS01730 SM00072 Guanylate kinase homologues. Gferi_RS01765 SM00363 S4 RNA-binding domain Gferi_RS01800 SM00363 S4 RNA-binding domain Gferi_RS01845 SM01207 Gferi_RS01845 Gferi_RS01875 SM00382 ATPases associated with a variety of cellular activities Gferi_RS01880 SM00091 PAS domain Gferi_RS01880 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS01880 SM00387 Histidine kinase-like ATPases Gferi_RS01880 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS01885 SM00448 cheY-homologous receiver domain Gferi_RS01885 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS01920 SM00864 Tubulin/FtsZ family, GTPase domain Gferi_RS01920 SM00865 Tubulin/FtsZ family, C-terminal domain Gferi_RS01980 SM00740 Gferi_RS01980 Gferi_RS02040 SM00854 Bacterial capsule synthesis protein PGA_cap Gferi_RS02045 SM01133 Gferi_RS02045 Gferi_RS02100 SM00382 ATPases associated with a variety of cellular activities Gferi_RS02105 SM00382 ATPases associated with a variety of cellular activities Gferi_RS02125 SM00487 DEAD-like helicases superfamily Gferi_RS02125 SM00490 helicase superfamily c-terminal domain Gferi_RS02190 SM00400 zinc finger Gferi_RS02190 SM00493 Gferi_RS02190 Gferi_RS02200 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Gferi_RS02220 SM00116 Domain in cystathionine beta-synthase and other proteins. Gferi_RS02255 SM00116 Domain in cystathionine beta-synthase and other proteins. Gferi_RS02255 SM01091 Transporter associated domain Gferi_RS02260 SM00014 Acid phosphatase homologues Gferi_RS02270 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Gferi_RS02325 SM00729 Elongator protein 3, MiaB family, Radical SAM Gferi_RS02340 SM00271 DnaJ molecular chaperone homology domain Gferi_RS02365 SM00729 Elongator protein 3, MiaB family, Radical SAM Gferi_RS02370 SM00838 Elongation factor G C-terminus Gferi_RS02400 SM00849 Metallo-beta-lactamase superfamily Gferi_RS02415 SM00849 Metallo-beta-lactamase superfamily Gferi_RS02425 SM00100 Cyclic nucleotide-monophosphate binding domain Gferi_RS02425 SM00419 helix_turn_helix, cAMP Regulatory protein Gferi_RS02445 SM00028 Tetratricopeptide repeats Gferi_RS02500 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Gferi_RS02505 SM00155 Phospholipase D. Active site motifs. Gferi_RS02520 SM00831 Cation transporter/ATPase, N-terminus Gferi_RS02540 SM00342 helix_turn_helix, arabinose operon control protein Gferi_RS02540 SM00448 cheY-homologous receiver domain Gferi_RS02545 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS02545 SM00387 Histidine kinase-like ATPases Gferi_RS02550 SM00858 Gferi_RS02550 Gferi_RS02565 SM00354 helix_turn _helix lactose operon repressor Gferi_RS02580 SM00344 helix_turn_helix ASNC type Gferi_RS02585 SM00857 Resolvase, N terminal domain Gferi_RS02590 SM00052 Putative diguanylate phosphodiesterase Gferi_RS02590 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Gferi_RS02590 SM00091 PAS domain Gferi_RS02590 SM00267 diguanylate cyclase Gferi_RS02600 SM00387 Histidine kinase-like ATPases Gferi_RS02605 SM00448 cheY-homologous receiver domain Gferi_RS02640 SM00900 Gferi_RS02640 Gferi_RS02665 SM00984 UDP binding domain Gferi_RS02675 SM00014 Acid phosphatase homologues Gferi_RS02685 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Gferi_RS02715 SM00881 CoA binding domain Gferi_RS02735 SM00567 E-Z type HEAT repeats Gferi_RS02750 SM00849 Metallo-beta-lactamase superfamily Gferi_RS02815 SM00387 Histidine kinase-like ATPases Gferi_RS02825 SM00793 Accessory gene regulator B Gferi_RS02875 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS02875 SM00387 Histidine kinase-like ATPases Gferi_RS02875 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS02880 SM00448 cheY-homologous receiver domain Gferi_RS02880 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS02900 SM00849 Metallo-beta-lactamase superfamily Gferi_RS02930 SM00829 Enoylreductase Gferi_RS02935 SM00345 helix_turn_helix gluconate operon transcriptional repressor Gferi_RS02935 SM00895 Gferi_RS02935 Gferi_RS02955 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Gferi_RS02965 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Gferi_RS02970 SM01092 CO dehydrogenase flavoprotein C-terminal domain Gferi_RS02990 SM00793 Accessory gene regulator B Gferi_RS03025 SM00382 ATPases associated with a variety of cellular activities Gferi_RS03070 SM00387 Histidine kinase-like ATPases Gferi_RS03085 SM00981 Gferi_RS03085 Gferi_RS03105 SM00870 Gferi_RS03105 Gferi_RS03110 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Gferi_RS03275 SM01078 Gferi_RS03275 Gferi_RS03305 SM01018 B12 binding domain Gferi_RS03315 SM00382 ATPases associated with a variety of cellular activities Gferi_RS03325 SM00387 Histidine kinase-like ATPases Gferi_RS03335 SM00849 Metallo-beta-lactamase superfamily Gferi_RS03340 SM00434 DNA Topoisomerase IV Gferi_RS03345 SM00433 TopoisomeraseII Gferi_RS03355 SM00346 helix_turn_helix isocitrate lyase regulation Gferi_RS03380 SM00091 PAS domain Gferi_RS03380 SM00382 ATPases associated with a variety of cellular activities Gferi_RS03390 SM00345 helix_turn_helix gluconate operon transcriptional repressor Gferi_RS03390 SM00895 Gferi_RS03390 Gferi_RS03430 SM00346 helix_turn_helix isocitrate lyase regulation Gferi_RS03440 SM00481 DNA polymerase alpha chain like domain Gferi_RS03445 SM00382 ATPases associated with a variety of cellular activities Gferi_RS03485 SM00857 Resolvase, N terminal domain Gferi_RS03490 SM00857 Resolvase, N terminal domain Gferi_RS03495 SM00857 Resolvase, N terminal domain Gferi_RS03505 SM00491 Gferi_RS03505 Gferi_RS03560 SM00861 Transketolase, pyrimidine binding domain Gferi_RS03600 SM00857 Resolvase, N terminal domain Gferi_RS03650 SM00530 Helix-turn-helix XRE-family like proteins Gferi_RS03670 SM00487 DEAD-like helicases superfamily Gferi_RS03765 SM00858 Gferi_RS03765 Gferi_RS03775 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Gferi_RS03775 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Gferi_RS03775 SM00493 Gferi_RS03775 Gferi_RS03840 SM01040 BRO family, N-terminal domain Gferi_RS03855 SM00470 ParB-like nuclease domain Gferi_RS03975 SM00028 Tetratricopeptide repeats Gferi_RS03995 SM00729 Elongator protein 3, MiaB family, Radical SAM Gferi_RS04015 SM00729 Elongator protein 3, MiaB family, Radical SAM Gferi_RS04020 SM00836 DALR anticodon binding domain Gferi_RS04020 SM01016 Arginyl tRNA synthetase N terminal dom Gferi_RS04025 SM00028 Tetratricopeptide repeats Gferi_RS04030 SM00909 Sporulation and spore germination Gferi_RS04045 SM00463 Small MutS-related domain Gferi_RS04045 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Gferi_RS04045 SM00534 ATPase domain of DNA mismatch repair MUTS family Gferi_RS04060 SM00873 B3/4 domain Gferi_RS04060 SM00874 tRNA synthetase B5 domain Gferi_RS04060 SM00896 Ferredoxin-fold anticodon binding domain Gferi_RS04070 SM00967 RNA 2'-O ribose methyltransferase substrate binding Gferi_RS04110 SM00382 ATPases associated with a variety of cellular activities Gferi_RS04130 SM00382 ATPases associated with a variety of cellular activities Gferi_RS04135 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Gferi_RS04185 SM00357 Cold shock protein domain Gferi_RS04225 SM00420 helix_turn_helix, Deoxyribose operon repressor Gferi_RS04225 SM01134 Gferi_RS04225 Gferi_RS04230 SM00859 Semialdehyde dehydrogenase, NAD binding domain Gferi_RS04235 SM01130 Gferi_RS04235 Gferi_RS04260 SM00091 PAS domain Gferi_RS04260 SM00382 ATPases associated with a variety of cellular activities Gferi_RS04365 SM00903 Flavin reductase like domain Gferi_RS04415 SM00420 helix_turn_helix, Deoxyribose operon repressor Gferi_RS04415 SM01134 Gferi_RS04415 Gferi_RS04430 SM00422 helix_turn_helix, mercury resistance Gferi_RS04455 SM00849 Metallo-beta-lactamase superfamily Gferi_RS04470 SM00420 helix_turn_helix, Deoxyribose operon repressor Gferi_RS04470 SM01134 Gferi_RS04470 Gferi_RS04560 SM01018 B12 binding domain Gferi_RS04570 SM00382 ATPases associated with a variety of cellular activities Gferi_RS04580 SM00893 Electron transfer flavoprotein domain Gferi_RS04585 SM00893 Electron transfer flavoprotein domain Gferi_RS04600 SM00893 Electron transfer flavoprotein domain Gferi_RS04650 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Gferi_RS04670 SM00849 Metallo-beta-lactamase superfamily Gferi_RS04695 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Gferi_RS04710 SM00347 helix_turn_helix multiple antibiotic resistance protein Gferi_RS04715 SM00382 ATPases associated with a variety of cellular activities Gferi_RS04730 SM00857 Resolvase, N terminal domain Gferi_RS04815 SM00563 Phosphate acyltransferases Gferi_RS04885 SM00100 Cyclic nucleotide-monophosphate binding domain Gferi_RS04890 SM00382 ATPases associated with a variety of cellular activities Gferi_RS04895 SM00382 ATPases associated with a variety of cellular activities Gferi_RS04920 SM00421 helix_turn_helix, Lux Regulon Gferi_RS04920 SM00448 cheY-homologous receiver domain Gferi_RS04925 SM00387 Histidine kinase-like ATPases Gferi_RS04975 SM00382 ATPases associated with a variety of cellular activities Gferi_RS05020 SM00530 Helix-turn-helix XRE-family like proteins Gferi_RS05025 SM00481 DNA polymerase alpha chain like domain Gferi_RS05035 SM00342 helix_turn_helix, arabinose operon control protein Gferi_RS05075 SM00347 helix_turn_helix multiple antibiotic resistance protein Gferi_RS05090 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Gferi_RS05090 SM00267 diguanylate cyclase Gferi_RS05145 SM00481 DNA polymerase alpha chain like domain Gferi_RS05195 SM00382 ATPases associated with a variety of cellular activities Gferi_RS05220 SM00382 ATPases associated with a variety of cellular activities Gferi_RS05230 SM00100 Cyclic nucleotide-monophosphate binding domain Gferi_RS05230 SM00419 helix_turn_helix, cAMP Regulatory protein Gferi_RS05240 SM01078 Gferi_RS05240 Gferi_RS05270 SM00267 diguanylate cyclase Gferi_RS05270 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Gferi_RS05285 SM00900 Gferi_RS05285 Gferi_RS05290 SM00421 helix_turn_helix, Lux Regulon Gferi_RS05290 SM00448 cheY-homologous receiver domain Gferi_RS05295 SM00387 Histidine kinase-like ATPases Gferi_RS05300 SM00382 ATPases associated with a variety of cellular activities Gferi_RS05305 SM00382 ATPases associated with a variety of cellular activities Gferi_RS05320 SM00116 Domain in cystathionine beta-synthase and other proteins. Gferi_RS05335 SM00345 helix_turn_helix gluconate operon transcriptional repressor Gferi_RS05335 SM00866 Gferi_RS05335 Gferi_RS05360 SM00100 Cyclic nucleotide-monophosphate binding domain Gferi_RS05360 SM00419 helix_turn_helix, cAMP Regulatory protein Gferi_RS05365 SM00849 Metallo-beta-lactamase superfamily Gferi_RS05375 SM00478 endonuclease III Gferi_RS05385 SM00091 PAS domain Gferi_RS05385 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS05385 SM00387 Histidine kinase-like ATPases Gferi_RS05385 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS05390 SM00448 cheY-homologous receiver domain Gferi_RS05415 SM00448 cheY-homologous receiver domain Gferi_RS05420 SM00448 cheY-homologous receiver domain Gferi_RS05425 SM00091 PAS domain Gferi_RS05425 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS05425 SM00387 Histidine kinase-like ATPases Gferi_RS05425 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS05475 SM00382 ATPases associated with a variety of cellular activities Gferi_RS05480 SM00636 Gferi_RS05480 Gferi_RS05515 SM00382 ATPases associated with a variety of cellular activities Gferi_RS05520 SM00382 ATPases associated with a variety of cellular activities Gferi_RS05645 SM00448 cheY-homologous receiver domain Gferi_RS05650 SM00387 Histidine kinase-like ATPases Gferi_RS05675 SM00448 cheY-homologous receiver domain Gferi_RS05680 SM00387 Histidine kinase-like ATPases Gferi_RS05710 SM00240 Forkhead associated domain Gferi_RS05770 SM01230 Gferi_RS05770 Gferi_RS05795 SM00382 ATPases associated with a variety of cellular activities Gferi_RS05815 SM00850 LytTr DNA-binding domain Gferi_RS05830 SM00529 Helix-turn-helix diphteria tox regulatory element Gferi_RS05855 SM00419 helix_turn_helix, cAMP Regulatory protein Gferi_RS05900 SM00382 ATPases associated with a variety of cellular activities Gferi_RS05905 SM00382 ATPases associated with a variety of cellular activities Gferi_RS05930 SM00382 ATPases associated with a variety of cellular activities Gferi_RS05930 SM00448 cheY-homologous receiver domain Gferi_RS05935 SM00387 Histidine kinase-like ATPases Gferi_RS05935 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS06055 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS06055 SM00387 Histidine kinase-like ATPases Gferi_RS06055 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS06060 SM00448 cheY-homologous receiver domain Gferi_RS06060 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS06065 SM00344 helix_turn_helix ASNC type Gferi_RS06075 SM00729 Elongator protein 3, MiaB family, Radical SAM Gferi_RS06080 SM00729 Elongator protein 3, MiaB family, Radical SAM Gferi_RS06130 SM00232 JAB/MPN domain Gferi_RS06155 SM00382 ATPases associated with a variety of cellular activities Gferi_RS06155 SM00448 cheY-homologous receiver domain Gferi_RS06160 SM00091 PAS domain Gferi_RS06160 SM00387 Histidine kinase-like ATPases Gferi_RS06160 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS06220 SM00062 Bacterial periplasmic substrate-binding proteins Gferi_RS06220 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. Gferi_RS06230 SM00382 ATPases associated with a variety of cellular activities Gferi_RS06235 SM01002 Alanine dehydrogenase/PNT, C-terminal domain Gferi_RS06235 SM01003 Alanine dehydrogenase/PNT, N-terminal domain Gferi_RS06260 SM00382 ATPases associated with a variety of cellular activities Gferi_RS06295 SM00331 Sigma factor PP2C-like phosphatases Gferi_RS06410 SM00226 Low molecular weight phosphatase family Gferi_RS06415 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Gferi_RS06430 SM00347 helix_turn_helix multiple antibiotic resistance protein Gferi_RS06460 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Gferi_RS06510 SM00382 ATPases associated with a variety of cellular activities Gferi_RS06515 SM00345 helix_turn_helix gluconate operon transcriptional repressor Gferi_RS06535 SM00382 ATPases associated with a variety of cellular activities Gferi_RS06540 SM01002 Alanine dehydrogenase/PNT, C-terminal domain Gferi_RS06540 SM01003 Alanine dehydrogenase/PNT, N-terminal domain Gferi_RS06590 SM00382 ATPases associated with a variety of cellular activities Gferi_RS06600 SM00382 ATPases associated with a variety of cellular activities Gferi_RS06630 SM00382 ATPases associated with a variety of cellular activities Gferi_RS06650 SM00422 helix_turn_helix, mercury resistance Gferi_RS06660 SM00342 helix_turn_helix, arabinose operon control protein Gferi_RS06675 SM01130 Gferi_RS06675 Gferi_RS06685 SM00858 Gferi_RS06685 Gferi_RS06740 SM00345 helix_turn_helix gluconate operon transcriptional repressor Gferi_RS06745 SM00421 helix_turn_helix, Lux Regulon Gferi_RS06765 SM00421 helix_turn_helix, Lux Regulon Gferi_RS06770 SM00382 ATPases associated with a variety of cellular activities Gferi_RS06775 SM00382 ATPases associated with a variety of cellular activities Gferi_RS06805 SM00342 helix_turn_helix, arabinose operon control protein Gferi_RS06815 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Gferi_RS06815 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS06820 SM00421 helix_turn_helix, Lux Regulon Gferi_RS06820 SM00448 cheY-homologous receiver domain Gferi_RS06830 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Gferi_RS06830 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Gferi_RS06830 SM00091 PAS domain Gferi_RS06830 SM00387 Histidine kinase-like ATPases Gferi_RS06830 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS06830 SM00448 cheY-homologous receiver domain Gferi_RS06835 SM01068 Putative carbohydrate binding domain Gferi_RS06860 SM00354 helix_turn _helix lactose operon repressor Gferi_RS06870 SM00646 Gferi_RS06870 Gferi_RS06895 SM00028 Tetratricopeptide repeats Gferi_RS06900 SM00028 Tetratricopeptide repeats Gferi_RS06945 SM00858 Gferi_RS06945 Gferi_RS07015 SM00382 ATPases associated with a variety of cellular activities Gferi_RS07020 SM00382 ATPases associated with a variety of cellular activities Gferi_RS07045 SM00100 Cyclic nucleotide-monophosphate binding domain Gferi_RS07095 SM00382 ATPases associated with a variety of cellular activities Gferi_RS07120 SM00849 Metallo-beta-lactamase superfamily Gferi_RS07130 SM00382 ATPases associated with a variety of cellular activities Gferi_RS07145 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS07145 SM00387 Histidine kinase-like ATPases Gferi_RS07145 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS07150 SM00448 cheY-homologous receiver domain Gferi_RS07150 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS07155 SM00346 helix_turn_helix isocitrate lyase regulation Gferi_RS07205 SM00091 PAS domain Gferi_RS07205 SM00382 ATPases associated with a variety of cellular activities Gferi_RS07215 SM00746 metallochaperone-like domain Gferi_RS07220 SM00448 cheY-homologous receiver domain Gferi_RS07220 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS07225 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS07225 SM00387 Histidine kinase-like ATPases Gferi_RS07225 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS07230 SM00382 ATPases associated with a variety of cellular activities Gferi_RS07270 SM00530 Helix-turn-helix XRE-family like proteins Gferi_RS07340 SM00729 Elongator protein 3, MiaB family, Radical SAM Gferi_RS07400 SM00450 Rhodanese Homology Domain Gferi_RS07405 SM00450 Rhodanese Homology Domain Gferi_RS07420 SM00244 prohibitin homologues Gferi_RS07425 SM00257 Lysin motif Gferi_RS07430 SM00100 Cyclic nucleotide-monophosphate binding domain Gferi_RS07485 SM01117 Gferi_RS07485 Gferi_RS07510 SM00420 helix_turn_helix, Deoxyribose operon repressor Gferi_RS07510 SM01134 Gferi_RS07510 Gferi_RS07515 SM00382 ATPases associated with a variety of cellular activities Gferi_RS07555 SM00382 ATPases associated with a variety of cellular activities Gferi_RS07560 SM00382 ATPases associated with a variety of cellular activities Gferi_RS07585 SM00448 cheY-homologous receiver domain Gferi_RS07585 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS07590 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS07590 SM00387 Histidine kinase-like ATPases Gferi_RS07590 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS07600 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Gferi_RS07615 SM00342 helix_turn_helix, arabinose operon control protein Gferi_RS07635 SM00448 cheY-homologous receiver domain Gferi_RS07635 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS07640 SM00387 Histidine kinase-like ATPases Gferi_RS07640 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS07665 SM00257 Lysin motif Gferi_RS07680 SM00382 ATPases associated with a variety of cellular activities Gferi_RS07710 SM00646 Gferi_RS07710 Gferi_RS07715 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS07715 SM00387 Histidine kinase-like ATPases Gferi_RS07715 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS07720 SM00448 cheY-homologous receiver domain Gferi_RS07720 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS07755 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS07755 SM00387 Histidine kinase-like ATPases Gferi_RS07755 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS07760 SM00448 cheY-homologous receiver domain Gferi_RS07760 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS07785 SM00345 helix_turn_helix gluconate operon transcriptional repressor Gferi_RS07820 SM01018 B12 binding domain Gferi_RS07830 SM00091 PAS domain Gferi_RS07830 SM00382 ATPases associated with a variety of cellular activities Gferi_RS07840 SM00382 ATPases associated with a variety of cellular activities Gferi_RS07895 SM00422 helix_turn_helix, mercury resistance Gferi_RS07910 SM00903 Flavin reductase like domain Gferi_RS07920 SM00347 helix_turn_helix multiple antibiotic resistance protein Gferi_RS07955 SM00382 ATPases associated with a variety of cellular activities Gferi_RS07960 SM00387 Histidine kinase-like ATPases Gferi_RS07960 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS07965 SM00448 cheY-homologous receiver domain Gferi_RS07965 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS08015 SM00829 Enoylreductase Gferi_RS08040 SM00422 helix_turn_helix, mercury resistance Gferi_RS08070 SM00345 helix_turn_helix gluconate operon transcriptional repressor Gferi_RS08070 SM00895 Gferi_RS08070 Gferi_RS08090 SM00422 helix_turn_helix, mercury resistance Gferi_RS08100 SM00342 helix_turn_helix, arabinose operon control protein Gferi_RS08100 SM00448 cheY-homologous receiver domain Gferi_RS08105 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS08115 SM00382 ATPases associated with a variety of cellular activities Gferi_RS08120 SM00382 ATPases associated with a variety of cellular activities Gferi_RS08170 SM00382 ATPases associated with a variety of cellular activities Gferi_RS08175 SM00382 ATPases associated with a variety of cellular activities Gferi_RS08200 SM00900 Gferi_RS08200 Gferi_RS08205 SM00900 Gferi_RS08205 Gferi_RS08255 SM00342 helix_turn_helix, arabinose operon control protein Gferi_RS08260 SM00849 Metallo-beta-lactamase superfamily Gferi_RS08285 SM00448 cheY-homologous receiver domain Gferi_RS08285 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS08290 SM00387 Histidine kinase-like ATPases Gferi_RS08290 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS08295 SM00382 ATPases associated with a variety of cellular activities Gferi_RS08325 SM01130 Gferi_RS08325 Gferi_RS08345 SM00091 PAS domain Gferi_RS08345 SM00382 ATPases associated with a variety of cellular activities Gferi_RS08365 SM00382 ATPases associated with a variety of cellular activities Gferi_RS08375 SM00354 helix_turn _helix lactose operon repressor Gferi_RS08395 SM00764 Citrate lyase ligase C-terminal domain Gferi_RS08480 SM00091 PAS domain Gferi_RS08480 SM00382 ATPases associated with a variety of cellular activities Gferi_RS08505 SM00419 helix_turn_helix, cAMP Regulatory protein Gferi_RS08545 SM00530 Helix-turn-helix XRE-family like proteins Gferi_RS08575 SM00382 ATPases associated with a variety of cellular activities Gferi_RS08640 SM00382 ATPases associated with a variety of cellular activities Gferi_RS08650 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Gferi_RS08655 SM00530 Helix-turn-helix XRE-family like proteins Gferi_RS08660 SM00346 helix_turn_helix isocitrate lyase regulation Gferi_RS08705 SM00052 Putative diguanylate phosphodiesterase Gferi_RS08705 SM00267 diguanylate cyclase Gferi_RS08710 SM00052 Putative diguanylate phosphodiesterase Gferi_RS08715 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Gferi_RS08760 SM00829 Enoylreductase Gferi_RS08815 SM00345 helix_turn_helix gluconate operon transcriptional repressor Gferi_RS08815 SM00895 Gferi_RS08815 Gferi_RS08840 SM00387 Histidine kinase-like ATPases Gferi_RS08840 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS08850 SM00345 helix_turn_helix gluconate operon transcriptional repressor Gferi_RS08850 SM00895 Gferi_RS08850 Gferi_RS08865 SM00257 Lysin motif Gferi_RS08870 SM00357 Cold shock protein domain Gferi_RS08920 SM01018 B12 binding domain Gferi_RS08940 SM00316 Ribosomal protein S1-like RNA-binding domain Gferi_RS09045 SM00900 Gferi_RS09045 Gferi_RS09055 SM00731 SprT homologues. Gferi_RS09065 SM00091 PAS domain Gferi_RS09065 SM00382 ATPases associated with a variety of cellular activities Gferi_RS09070 SM00899 Gferi_RS09070 Gferi_RS09130 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Gferi_RS09145 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Gferi_RS09155 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS09155 SM00387 Histidine kinase-like ATPases Gferi_RS09155 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS09160 SM00448 cheY-homologous receiver domain Gferi_RS09160 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS09165 SM00382 ATPases associated with a variety of cellular activities Gferi_RS09195 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Gferi_RS09195 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Gferi_RS09195 SM00493 Gferi_RS09195 Gferi_RS09205 SM00382 ATPases associated with a variety of cellular activities Gferi_RS09220 SM00636 Gferi_RS09220 Gferi_RS09250 SM01321 Gferi_RS09250 Gferi_RS09260 SM00382 ATPases associated with a variety of cellular activities Gferi_RS09260 SM00464 Found in ATP-dependent protease La (LON) Gferi_RS09265 SM00382 ATPases associated with a variety of cellular activities Gferi_RS09270 SM00382 ATPases associated with a variety of cellular activities Gferi_RS09270 SM00994 ClpX C4-type zinc finger Gferi_RS09270 SM01086 C-terminal, D2-small domain, of ClpB protein Gferi_RS09305 SM00382 ATPases associated with a variety of cellular activities Gferi_RS09315 SM00100 Cyclic nucleotide-monophosphate binding domain Gferi_RS09320 SM00448 cheY-homologous receiver domain Gferi_RS09325 SM00331 Sigma factor PP2C-like phosphatases Gferi_RS09340 SM00073 Histidine Phosphotransfer domain Gferi_RS09340 SM00260 Two component signalling adaptor domain Gferi_RS09340 SM00387 Histidine kinase-like ATPases Gferi_RS09340 SM01231 Gferi_RS09340 Gferi_RS09345 SM00260 Two component signalling adaptor domain Gferi_RS09350 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Gferi_RS09350 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS09355 SM00091 PAS domain Gferi_RS09370 SM00267 diguanylate cyclase Gferi_RS09370 SM00448 cheY-homologous receiver domain Gferi_RS09405 SM00902 Iron hydrogenase small subunit Gferi_RS09405 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Gferi_RS09475 SM00909 Sporulation and spore germination Gferi_RS09485 SM00646 Gferi_RS09485 Gferi_RS09510 SM00382 ATPases associated with a variety of cellular activities Gferi_RS09515 SM00382 ATPases associated with a variety of cellular activities Gferi_RS09540 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Gferi_RS09540 SM00292 breast cancer carboxy-terminal domain Gferi_RS09540 SM00532 Ligase N family Gferi_RS09545 SM00305 Hint (Hedgehog/Intein) domain C-terminal region Gferi_RS09555 SM00882 Coenzyme A transferase Gferi_RS09560 SM00091 PAS domain Gferi_RS09560 SM00382 ATPases associated with a variety of cellular activities Gferi_RS09600 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Gferi_RS09605 SM00854 Bacterial capsule synthesis protein PGA_cap Gferi_RS09630 SM00893 Electron transfer flavoprotein domain Gferi_RS09635 SM00893 Electron transfer flavoprotein domain Gferi_RS09680 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Gferi_RS09680 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS09715 SM00382 ATPases associated with a variety of cellular activities Gferi_RS09735 SM00091 PAS domain Gferi_RS09735 SM00382 ATPases associated with a variety of cellular activities Gferi_RS09780 SM00345 helix_turn_helix gluconate operon transcriptional repressor Gferi_RS09780 SM00866 Gferi_RS09780 Gferi_RS09800 SM00529 Helix-turn-helix diphteria tox regulatory element Gferi_RS09805 SM00382 ATPases associated with a variety of cellular activities Gferi_RS09820 SM00725 NEAr Transporter domain Gferi_RS09825 SM00725 NEAr Transporter domain Gferi_RS09835 SM00419 helix_turn_helix, cAMP Regulatory protein Gferi_RS09845 SM00382 ATPases associated with a variety of cellular activities Gferi_RS09850 SM00382 ATPases associated with a variety of cellular activities Gferi_RS09895 SM00346 helix_turn_helix isocitrate lyase regulation Gferi_RS09905 SM00382 ATPases associated with a variety of cellular activities Gferi_RS09905 SM00930 Gferi_RS09905 Gferi_RS09925 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain Gferi_RS09970 SM00342 helix_turn_helix, arabinose operon control protein Gferi_RS09970 SM00448 cheY-homologous receiver domain Gferi_RS09985 SM00344 helix_turn_helix ASNC type Gferi_RS09990 SM01209 Gferi_RS09990 Gferi_RS09990 SM01210 Gferi_RS09990 Gferi_RS09995 SM00798 AICARFT/IMPCHase bienzyme Gferi_RS09995 SM00851 MGS-like domain Gferi_RS10025 SM01211 Gferi_RS10025 Gferi_RS10035 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Gferi_RS10060 SM01001 AIR carboxylase Gferi_RS10080 SM01068 Putative carbohydrate binding domain Gferi_RS10095 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Gferi_RS10095 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS10145 SM00091 PAS domain Gferi_RS10145 SM00116 Domain in cystathionine beta-synthase and other proteins. Gferi_RS10145 SM00382 ATPases associated with a variety of cellular activities Gferi_RS10155 SM00825 Beta-ketoacyl synthase Gferi_RS10160 SM00342 helix_turn_helix, arabinose operon control protein Gferi_RS10160 SM00871 Bacterial transcription activator, effector binding domain Gferi_RS10165 SM00116 Domain in cystathionine beta-synthase and other proteins. Gferi_RS10195 SM00091 PAS domain Gferi_RS10195 SM00382 ATPases associated with a variety of cellular activities Gferi_RS10200 SM00248 ankyrin repeats Gferi_RS10210 SM00116 Domain in cystathionine beta-synthase and other proteins. Gferi_RS10210 SM01240 Gferi_RS10210 Gferi_RS10255 SM00382 ATPases associated with a variety of cellular activities Gferi_RS10270 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Gferi_RS10280 SM00883 Chaperonin 10 Kd subunit Gferi_RS10290 SM00028 Tetratricopeptide repeats Gferi_RS10290 SM01043 Bacterial transcriptional activator domain Gferi_RS10295 SM00028 Tetratricopeptide repeats Gferi_RS10295 SM01043 Bacterial transcriptional activator domain Gferi_RS10300 SM01321 Gferi_RS10300 Gferi_RS10340 SM01321 Gferi_RS10340 Gferi_RS10405 SM01321 Gferi_RS10405 Gferi_RS10430 SM00060 Fibronectin type 3 domain Gferi_RS10445 SM01221 Gferi_RS10445 Gferi_RS10445 SM01222 Gferi_RS10445 Gferi_RS10480 SM00478 endonuclease III Gferi_RS10500 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Gferi_RS10515 SM00347 helix_turn_helix multiple antibiotic resistance protein Gferi_RS10520 SM00893 Electron transfer flavoprotein domain Gferi_RS10525 SM00893 Electron transfer flavoprotein domain Gferi_RS10535 SM00881 CoA binding domain Gferi_RS10540 SM00382 ATPases associated with a variety of cellular activities Gferi_RS10600 SM00382 ATPases associated with a variety of cellular activities Gferi_RS10655 SM00316 Ribosomal protein S1-like RNA-binding domain Gferi_RS10655 SM00732 Likely ribonuclease with RNase H fold. Gferi_RS10660 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Gferi_RS10660 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS10665 SM00937 Gferi_RS10665 Gferi_RS10670 SM00957 SecA DEAD-like domain Gferi_RS10670 SM00958 SecA preprotein cross-linking domain Gferi_RS10685 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Gferi_RS10750 SM00028 Tetratricopeptide repeats Gferi_RS10805 SM00267 diguanylate cyclase Gferi_RS10810 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Gferi_RS10810 SM00382 ATPases associated with a variety of cellular activities Gferi_RS10850 SM00849 Metallo-beta-lactamase superfamily Gferi_RS10990 SM00460 Transglutaminase/protease-like homologues Gferi_RS11015 SM00382 ATPases associated with a variety of cellular activities Gferi_RS11105 SM00226 Low molecular weight phosphatase family Gferi_RS11120 SM00937 Gferi_RS11120 Gferi_RS11145 SM00882 Coenzyme A transferase Gferi_RS11150 SM00882 Coenzyme A transferase Gferi_RS11160 SM00091 PAS domain Gferi_RS11160 SM00382 ATPases associated with a variety of cellular activities Gferi_RS11175 SM00357 Cold shock protein domain Gferi_RS11175 SM00382 ATPases associated with a variety of cellular activities Gferi_RS11175 SM00959 Rho termination factor, N-terminal domain Gferi_RS11305 SM00984 UDP binding domain Gferi_RS11385 SM00028 Tetratricopeptide repeats Gferi_RS11410 SM00347 helix_turn_helix multiple antibiotic resistance protein Gferi_RS11475 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Gferi_RS11475 SM00245 tail specific protease Gferi_RS11490 SM00060 Fibronectin type 3 domain Gferi_RS11490 SM00429 ig-like, plexins, transcription factors Gferi_RS11520 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Gferi_RS11520 SM00534 ATPase domain of DNA mismatch repair MUTS family Gferi_RS11540 SM00091 PAS domain Gferi_RS11540 SM00382 ATPases associated with a variety of cellular activities Gferi_RS11545 SM00836 DALR anticodon binding domain Gferi_RS11545 SM01016 Arginyl tRNA synthetase N terminal dom Gferi_RS11595 SM00345 helix_turn_helix gluconate operon transcriptional repressor Gferi_RS11595 SM00895 Gferi_RS11595 Gferi_RS11625 SM00421 helix_turn_helix, Lux Regulon Gferi_RS11625 SM00448 cheY-homologous receiver domain Gferi_RS11630 SM00387 Histidine kinase-like ATPases Gferi_RS11635 SM00460 Transglutaminase/protease-like homologues Gferi_RS11640 SM00257 Lysin motif Gferi_RS11690 SM00382 ATPases associated with a variety of cellular activities Gferi_RS11700 SM00646 Gferi_RS11700 Gferi_RS11710 SM00822 Gferi_RS11710 Gferi_RS11715 SM00091 PAS domain Gferi_RS11715 SM00382 ATPases associated with a variety of cellular activities Gferi_RS11725 SM00857 Resolvase, N terminal domain Gferi_RS11735 SM00882 Coenzyme A transferase Gferi_RS11785 SM00382 ATPases associated with a variety of cellular activities Gferi_RS11840 SM01230 Gferi_RS11840 Gferi_RS11845 SM00344 helix_turn_helix ASNC type Gferi_RS11880 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Gferi_RS11885 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS11885 SM00387 Histidine kinase-like ATPases Gferi_RS11885 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS11890 SM00448 cheY-homologous receiver domain Gferi_RS11890 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS11950 SM00382 ATPases associated with a variety of cellular activities Gferi_RS12055 SM00450 Rhodanese Homology Domain Gferi_RS12070 SM00450 Rhodanese Homology Domain Gferi_RS12075 SM00938 Nitrogen regulatory protein P-II Gferi_RS12090 SM00631 Gferi_RS12090 Gferi_RS12100 SM00650 Ribosomal RNA adenine dimethylases Gferi_RS12105 SM00493 Gferi_RS12105 Gferi_RS12110 SM01208 Gferi_RS12110 Gferi_RS12130 SM00155 Phospholipase D. Active site motifs. Gferi_RS12155 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Gferi_RS12160 SM00966 SpoVT / AbrB like domain Gferi_RS12310 SM00481 DNA polymerase alpha chain like domain Gferi_RS12315 SM00493 Gferi_RS12315 Gferi_RS12325 SM00382 ATPases associated with a variety of cellular activities Gferi_RS12425 SM00345 helix_turn_helix gluconate operon transcriptional repressor Gferi_RS12425 SM00866 Gferi_RS12425 Gferi_RS12485 SM00347 helix_turn_helix multiple antibiotic resistance protein Gferi_RS12505 SM00448 cheY-homologous receiver domain Gferi_RS12505 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS12510 SM00387 Histidine kinase-like ATPases Gferi_RS12510 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS12550 SM00382 ATPases associated with a variety of cellular activities Gferi_RS12555 SM00341 Helicase and RNase D C-terminal Gferi_RS12555 SM00487 DEAD-like helicases superfamily Gferi_RS12555 SM00490 helicase superfamily c-terminal domain Gferi_RS12555 SM00956 Gferi_RS12555 Gferi_RS12675 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Gferi_RS12675 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS12690 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Gferi_RS12690 SM00091 PAS domain Gferi_RS12690 SM00387 Histidine kinase-like ATPases Gferi_RS12690 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS12715 SM01321 Gferi_RS12715 Gferi_RS12740 SM00936 Penicillin-binding protein 5, C-terminal domain Gferi_RS12800 SM00851 MGS-like domain Gferi_RS12800 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Gferi_RS12800 SM01209 Gferi_RS12800 Gferi_RS12805 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain Gferi_RS12825 SM00859 Semialdehyde dehydrogenase, NAD binding domain Gferi_RS12970 SM00854 Bacterial capsule synthesis protein PGA_cap Gferi_RS12980 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Gferi_RS12980 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS12985 SM00382 ATPases associated with a variety of cellular activities Gferi_RS12990 SM00382 ATPases associated with a variety of cellular activities Gferi_RS13005 SM00345 helix_turn_helix gluconate operon transcriptional repressor Gferi_RS13005 SM00895 Gferi_RS13005 Gferi_RS13020 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Gferi_RS13025 SM00091 PAS domain Gferi_RS13025 SM00382 ATPases associated with a variety of cellular activities Gferi_RS13075 SM00098 Alkaline phosphatase homologues Gferi_RS13090 SM01120 Gferi_RS13090 Gferi_RS13100 SM00091 PAS domain Gferi_RS13100 SM00382 ATPases associated with a variety of cellular activities Gferi_RS13140 SM00890 Domain of unknown function Gferi_RS13150 SM00986 Uracil DNA glycosylase superfamily Gferi_RS13150 SM00987 UreE urease accessory protein, C-terminal domain Gferi_RS13155 SM00986 Uracil DNA glycosylase superfamily Gferi_RS13155 SM00987 UreE urease accessory protein, C-terminal domain Gferi_RS13170 SM00382 ATPases associated with a variety of cellular activities Gferi_RS13175 SM00382 ATPases associated with a variety of cellular activities Gferi_RS13230 SM00434 DNA Topoisomerase IV Gferi_RS13235 SM00387 Histidine kinase-like ATPases Gferi_RS13235 SM00433 TopoisomeraseII Gferi_RS13250 SM00363 S4 RNA-binding domain Gferi_RS13255 SM00480 DNA polymerase III beta subunit Gferi_RS13260 SM00382 ATPases associated with a variety of cellular activities Gferi_RS13260 SM00760 Bacterial dnaA protein helix-turn-helix domain Gferi_RS13275 SM01234 Gferi_RS13275 Gferi_RS13285 SM00393 Putative single-stranded nucleic acids-binding domain Gferi_RS13285 SM01245 Gferi_RS13285 Gferi_RS13295 SM01228 Gferi_RS13295 Gferi_RS13305 SM00470 ParB-like nuclease domain Gferi_RS13320 SM00470 ParB-like nuclease domain Gferi_RS13365 SM00046 Diacylglycerol kinase catalytic domain (presumed) Gferi_RS13395 SM00028 Tetratricopeptide repeats Gferi_RS13395 SM00530 Helix-turn-helix XRE-family like proteins Gferi_RS13435 SM00830 Chorismate mutase type II Gferi_RS13475 SM00346 helix_turn_helix isocitrate lyase regulation Gferi_RS13490 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Gferi_RS13490 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS13510 SM00091 PAS domain Gferi_RS13510 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS13510 SM00387 Histidine kinase-like ATPases Gferi_RS13510 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS13515 SM00382 ATPases associated with a variety of cellular activities Gferi_RS13515 SM00448 cheY-homologous receiver domain Gferi_RS13530 SM00796 Allophanate hydrolase subunit 1 Gferi_RS13535 SM00797 Allophanate hydrolase subunit 2 Gferi_RS13540 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Gferi_RS13540 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS13550 SM00563 Phosphate acyltransferases Gferi_RS13555 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Gferi_RS13575 SM00331 Sigma factor PP2C-like phosphatases Gferi_RS13615 SM00062 Bacterial periplasmic substrate-binding proteins Gferi_RS13615 SM00387 Histidine kinase-like ATPases Gferi_RS13615 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS13620 SM00382 ATPases associated with a variety of cellular activities Gferi_RS13620 SM00448 cheY-homologous receiver domain Gferi_RS13685 SM00382 ATPases associated with a variety of cellular activities Gferi_RS13720 SM00788 Adenylosuccinate synthetase Gferi_RS13735 SM00382 ATPases associated with a variety of cellular activities Gferi_RS13750 SM00257 Lysin motif Gferi_RS13750 SM01208 Gferi_RS13750 Gferi_RS13765 SM00448 cheY-homologous receiver domain Gferi_RS13765 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS13770 SM00091 PAS domain Gferi_RS13770 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS13770 SM00387 Histidine kinase-like ATPases Gferi_RS13770 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS13795 SM00849 Metallo-beta-lactamase superfamily Gferi_RS13800 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Gferi_RS13815 SM01059 Chloramphenicol acetyltransferase Gferi_RS13865 SM01321 Gferi_RS13865 Gferi_RS13905 SM01209 Gferi_RS13905 Gferi_RS13910 SM00382 ATPases associated with a variety of cellular activities Gferi_RS13975 SM01321 Gferi_RS13975 Gferi_RS13980 SM00091 PAS domain Gferi_RS13980 SM00382 ATPases associated with a variety of cellular activities Gferi_RS14000 SM00382 ATPases associated with a variety of cellular activities Gferi_RS14005 SM00849 Metallo-beta-lactamase superfamily Gferi_RS14025 SM00448 cheY-homologous receiver domain Gferi_RS14025 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS14030 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS14030 SM00387 Histidine kinase-like ATPases Gferi_RS14030 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS14075 SM00382 ATPases associated with a variety of cellular activities Gferi_RS14095 SM00382 ATPases associated with a variety of cellular activities Gferi_RS14155 SM00342 helix_turn_helix, arabinose operon control protein Gferi_RS14165 SM00245 tail specific protease Gferi_RS14170 SM00345 helix_turn_helix gluconate operon transcriptional repressor Gferi_RS14185 SM00342 helix_turn_helix, arabinose operon control protein Gferi_RS14185 SM00448 cheY-homologous receiver domain Gferi_RS14200 SM00382 ATPases associated with a variety of cellular activities Gferi_RS14280 SM00530 Helix-turn-helix XRE-family like proteins Gferi_RS14330 SM00873 B3/4 domain Gferi_RS14355 SM00116 Domain in cystathionine beta-synthase and other proteins. Gferi_RS14355 SM00924 MgtE intracellular N domain Gferi_RS14365 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Gferi_RS14400 SM00345 helix_turn_helix gluconate operon transcriptional repressor Gferi_RS14400 SM00895 Gferi_RS14400 Gferi_RS14415 SM00342 helix_turn_helix, arabinose operon control protein Gferi_RS14450 SM00530 Helix-turn-helix XRE-family like proteins Gferi_RS14460 SM00448 cheY-homologous receiver domain Gferi_RS14460 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS14465 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS14465 SM00387 Histidine kinase-like ATPases Gferi_RS14465 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS14485 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS14485 SM00387 Histidine kinase-like ATPases Gferi_RS14485 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS14490 SM00448 cheY-homologous receiver domain Gferi_RS14490 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS14645 SM00345 helix_turn_helix gluconate operon transcriptional repressor Gferi_RS14645 SM00895 Gferi_RS14645 Gferi_RS14680 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Gferi_RS14685 SM00345 helix_turn_helix gluconate operon transcriptional repressor Gferi_RS14685 SM00895 Gferi_RS14685 Gferi_RS14710 SM00829 Enoylreductase Gferi_RS14725 SM00382 ATPases associated with a variety of cellular activities Gferi_RS14745 SM00382 ATPases associated with a variety of cellular activities Gferi_RS14750 SM00345 helix_turn_helix gluconate operon transcriptional repressor Gferi_RS14765 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS14765 SM00387 Histidine kinase-like ATPases Gferi_RS14765 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS14770 SM00448 cheY-homologous receiver domain Gferi_RS14770 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS14780 SM00900 Gferi_RS14780 Gferi_RS14790 SM00382 ATPases associated with a variety of cellular activities Gferi_RS14840 SM00091 PAS domain Gferi_RS14840 SM00382 ATPases associated with a variety of cellular activities Gferi_RS14850 SM00636 Gferi_RS14850 Gferi_RS14865 SM00957 SecA DEAD-like domain Gferi_RS14890 SM00387 Histidine kinase-like ATPases Gferi_RS14890 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS14895 SM00448 cheY-homologous receiver domain Gferi_RS14895 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS14905 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS14910 SM00342 helix_turn_helix, arabinose operon control protein Gferi_RS14910 SM00448 cheY-homologous receiver domain Gferi_RS14925 SM00382 ATPases associated with a variety of cellular activities Gferi_RS14935 SM00954 Region found in RelA / SpoT proteins Gferi_RS14945 SM00382 ATPases associated with a variety of cellular activities Gferi_RS14960 SM00357 Cold shock protein domain Gferi_RS14980 SM00729 Elongator protein 3, MiaB family, Radical SAM Gferi_RS14990 SM00729 Elongator protein 3, MiaB family, Radical SAM Gferi_RS14995 SM00729 Elongator protein 3, MiaB family, Radical SAM Gferi_RS15000 SM00729 Elongator protein 3, MiaB family, Radical SAM Gferi_RS15010 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Gferi_RS15010 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS15015 SM00382 ATPases associated with a variety of cellular activities Gferi_RS15025 SM01217 Gferi_RS15025 Gferi_RS15040 SM00387 Histidine kinase-like ATPases Gferi_RS15040 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS15040 SM00448 cheY-homologous receiver domain Gferi_RS15045 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Gferi_RS15045 SM00387 Histidine kinase-like ATPases Gferi_RS15045 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS15045 SM00448 cheY-homologous receiver domain Gferi_RS15050 SM00138 Methyltransferase, chemotaxis proteins Gferi_RS15065 SM00382 ATPases associated with a variety of cellular activities Gferi_RS15070 SM00534 ATPase domain of DNA mismatch repair MUTS family Gferi_RS15080 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Gferi_RS15080 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Gferi_RS15080 SM00493 Gferi_RS15080 Gferi_RS15100 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Gferi_RS15100 SM00534 ATPase domain of DNA mismatch repair MUTS family Gferi_RS15105 SM00345 helix_turn_helix gluconate operon transcriptional repressor Gferi_RS15105 SM00895 Gferi_RS15105 Gferi_RS15110 SM00382 ATPases associated with a variety of cellular activities Gferi_RS15210 SM00382 ATPases associated with a variety of cellular activities Gferi_RS15215 SM00382 ATPases associated with a variety of cellular activities Gferi_RS15250 SM00062 Bacterial periplasmic substrate-binding proteins Gferi_RS15250 SM00267 diguanylate cyclase Gferi_RS15305 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS15305 SM00387 Histidine kinase-like ATPases Gferi_RS15305 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS15310 SM00448 cheY-homologous receiver domain Gferi_RS15310 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS15325 SM00465 GIY-YIG type nucleases (URI domain) Gferi_RS15340 SM01350 Gferi_RS15340 Gferi_RS15380 SM00382 ATPases associated with a variety of cellular activities Gferi_RS15385 SM00899 Gferi_RS15385 Gferi_RS15390 SM00899 Gferi_RS15390 Gferi_RS15405 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Gferi_RS15440 SM01018 B12 binding domain Gferi_RS15445 SM00382 ATPases associated with a variety of cellular activities Gferi_RS15475 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Gferi_RS15500 SM00347 helix_turn_helix multiple antibiotic resistance protein Gferi_RS15510 SM00052 Putative diguanylate phosphodiesterase Gferi_RS15510 SM00267 diguanylate cyclase Gferi_RS15520 SM00345 helix_turn_helix gluconate operon transcriptional repressor Gferi_RS15520 SM00866 Gferi_RS15520 Gferi_RS15565 SM00260 Two component signalling adaptor domain Gferi_RS15570 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Gferi_RS15585 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Gferi_RS15585 SM00091 PAS domain Gferi_RS15585 SM00387 Histidine kinase-like ATPases Gferi_RS15585 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS15630 SM00487 DEAD-like helicases superfamily Gferi_RS15655 SM00829 Enoylreductase Gferi_RS15665 SM00091 PAS domain Gferi_RS15665 SM00267 diguanylate cyclase Gferi_RS15665 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Gferi_RS15675 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Gferi_RS15710 SM00981 Gferi_RS15710 Gferi_RS15715 SM00834 Putative regulatory protein Gferi_RS15735 SM00917 LeuA allosteric (dimerisation) domain Gferi_RS15750 SM01329 Gferi_RS15750 Gferi_RS15785 SM00382 ATPases associated with a variety of cellular activities Gferi_RS15835 SM00877 Gferi_RS15835 Gferi_RS15845 SM00448 cheY-homologous receiver domain Gferi_RS15845 SM01012 Gferi_RS15845 Gferi_RS15850 SM00387 Histidine kinase-like ATPases Gferi_RS15875 SM00877 Gferi_RS15875 Gferi_RS15880 SM00877 Gferi_RS15880 Gferi_RS15890 SM00877 Gferi_RS15890 Gferi_RS15920 SM00877 Gferi_RS15920 Gferi_RS15930 SM00877 Gferi_RS15930 Gferi_RS15945 SM00448 cheY-homologous receiver domain Gferi_RS15945 SM00850 LytTr DNA-binding domain Gferi_RS15950 SM00387 Histidine kinase-like ATPases Gferi_RS15955 SM00793 Accessory gene regulator B Gferi_RS16035 SM00893 Electron transfer flavoprotein domain Gferi_RS16040 SM00893 Electron transfer flavoprotein domain Gferi_RS16070 SM00382 ATPases associated with a variety of cellular activities Gferi_RS16090 SM00450 Rhodanese Homology Domain Gferi_RS16105 SM00091 PAS domain Gferi_RS16105 SM00387 Histidine kinase-like ATPases Gferi_RS16105 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS16115 SM00729 Elongator protein 3, MiaB family, Radical SAM Gferi_RS16115 SM00876 Biotin and Thiamin Synthesis associated domain Gferi_RS16130 SM01221 Gferi_RS16130 Gferi_RS16130 SM01222 Gferi_RS16130 Gferi_RS16140 SM00382 ATPases associated with a variety of cellular activities Gferi_RS16140 SM00448 cheY-homologous receiver domain Gferi_RS16145 SM00062 Bacterial periplasmic substrate-binding proteins Gferi_RS16145 SM00387 Histidine kinase-like ATPases Gferi_RS16145 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS16170 SM00729 Elongator protein 3, MiaB family, Radical SAM Gferi_RS16180 SM00287 Bacterial SH3 domain homologues Gferi_RS16195 SM00382 ATPases associated with a variety of cellular activities Gferi_RS16230 SM00091 PAS domain Gferi_RS16230 SM00382 ATPases associated with a variety of cellular activities Gferi_RS16255 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain Gferi_RS16270 SM00387 Histidine kinase-like ATPases Gferi_RS16270 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS16275 SM00448 cheY-homologous receiver domain Gferi_RS16320 SM01018 B12 binding domain Gferi_RS16325 SM00345 helix_turn_helix gluconate operon transcriptional repressor Gferi_RS16325 SM00866 Gferi_RS16325 Gferi_RS16340 SM01018 B12 binding domain Gferi_RS16375 SM01018 B12 binding domain Gferi_RS16390 SM01018 B12 binding domain Gferi_RS16400 SM01018 B12 binding domain Gferi_RS16405 SM00345 helix_turn_helix gluconate operon transcriptional repressor Gferi_RS16405 SM00866 Gferi_RS16405 Gferi_RS16520 SM00530 Helix-turn-helix XRE-family like proteins Gferi_RS16525 SM00155 Phospholipase D. Active site motifs. Gferi_RS16530 SM00838 Elongation factor G C-terminus Gferi_RS16575 SM00244 prohibitin homologues Gferi_RS16600 SM00849 Metallo-beta-lactamase superfamily Gferi_RS16640 SM00861 Transketolase, pyrimidine binding domain Gferi_RS16670 SM00116 Domain in cystathionine beta-synthase and other proteins. Gferi_RS16670 SM01131 Gferi_RS16670 Gferi_RS16730 SM01400 Gferi_RS16730 Gferi_RS16735 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Gferi_RS16735 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS16745 SM00487 DEAD-like helicases superfamily Gferi_RS16745 SM00490 helicase superfamily c-terminal domain Gferi_RS16745 SM00982 Gferi_RS16745 Gferi_RS16745 SM01058 CarD-like/TRCF domain Gferi_RS16755 SM00966 SpoVT / AbrB like domain Gferi_RS16770 SM00411 bacterial (prokaryotic) histone like domain Gferi_RS16775 SM00363 S4 RNA-binding domain Gferi_RS16800 SM00316 Ribosomal protein S1-like RNA-binding domain Gferi_RS16820 SM00387 Histidine kinase-like ATPases Gferi_RS16820 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS16825 SM00331 Sigma factor PP2C-like phosphatases Gferi_RS16835 SM00220 Serine/Threonine protein kinases, catalytic domain Gferi_RS16840 SM00977 TilS substrate C-terminal domain Gferi_RS16845 SM00382 ATPases associated with a variety of cellular activities Gferi_RS16885 SM00382 ATPases associated with a variety of cellular activities Gferi_RS16985 SM00046 Diacylglycerol kinase catalytic domain (presumed) Gferi_RS16990 SM00646 Gferi_RS16990 Gferi_RS17040 SM00488 Gferi_RS17040 Gferi_RS17040 SM00491 Gferi_RS17040 Gferi_RS17075 SM00091 PAS domain Gferi_RS17075 SM00387 Histidine kinase-like ATPases Gferi_RS17075 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS17080 SM00448 cheY-homologous receiver domain Gferi_RS17085 SM00267 diguanylate cyclase Gferi_RS17085 SM00448 cheY-homologous receiver domain Gferi_RS17090 SM00838 Elongation factor G C-terminus Gferi_RS17090 SM00889 Elongation factor G, domain IV Gferi_RS17120 SM00382 ATPases associated with a variety of cellular activities Gferi_RS17120 SM01086 C-terminal, D2-small domain, of ClpB protein Gferi_RS17140 SM00382 ATPases associated with a variety of cellular activities Gferi_RS17160 SM01058 CarD-like/TRCF domain Gferi_RS17165 SM00670 Large family of predicted nucleotide-binding domains Gferi_RS17205 SM00858 Gferi_RS17205 Gferi_RS17220 SM00861 Transketolase, pyrimidine binding domain Gferi_RS17250 SM00946 Prolyl-tRNA synthetase, C-terminal Gferi_RS17265 SM00840 Gferi_RS17265 Gferi_RS17270 SM00535 Ribonuclease III family Gferi_RS17285 SM00967 RNA 2'-O ribose methyltransferase substrate binding Gferi_RS17320 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Gferi_RS17320 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Gferi_RS17325 SM00649 Ribosomal protein L11/L12 Gferi_RS17350 SM00098 Alkaline phosphatase homologues Gferi_RS17360 SM00663 RNA polymerase I subunit A N-terminus Gferi_RS17380 SM00838 Elongation factor G C-terminus Gferi_RS17380 SM00889 Elongation factor G, domain IV Gferi_RS17390 SM01403 Gferi_RS17390 Gferi_RS17410 SM01382 Gferi_RS17410 Gferi_RS17410 SM01383 Gferi_RS17410 Gferi_RS17445 SM01374 Gferi_RS17445 Gferi_RS17450 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Gferi_RS17515 SM00316 Ribosomal protein S1-like RNA-binding domain Gferi_RS17535 SM00363 S4 RNA-binding domain Gferi_RS17535 SM01390 Gferi_RS17535 Gferi_RS17540 SM00662 RNA polymerases D Gferi_RS17550 SM00382 ATPases associated with a variety of cellular activities Gferi_RS17555 SM00382 ATPases associated with a variety of cellular activities Gferi_RS17595 SM01018 B12 binding domain Gferi_RS17610 SM00342 helix_turn_helix, arabinose operon control protein Gferi_RS17625 SM00646 Gferi_RS17625 Gferi_RS17635 SM00729 Elongator protein 3, MiaB family, Radical SAM Gferi_RS17640 SM00878 Biotin carboxylase C-terminal domain Gferi_RS17655 SM00257 Lysin motif Gferi_RS17665 SM00387 Histidine kinase-like ATPases Gferi_RS17665 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS17675 SM00448 cheY-homologous receiver domain Gferi_RS17675 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS17680 SM01208 Gferi_RS17680 Gferi_RS17695 SM00091 PAS domain Gferi_RS17695 SM00387 Histidine kinase-like ATPases Gferi_RS17695 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS17740 SM01018 B12 binding domain Gferi_RS17775 SM00481 DNA polymerase alpha chain like domain Gferi_RS17790 SM00900 Gferi_RS17790 Gferi_RS17870 SM00345 helix_turn_helix gluconate operon transcriptional repressor Gferi_RS17870 SM00895 Gferi_RS17870 Gferi_RS17900 SM00342 helix_turn_helix, arabinose operon control protein Gferi_RS17900 SM00448 cheY-homologous receiver domain Gferi_RS17945 SM00852 Probable molybdopterin binding domain Gferi_RS17955 SM00346 helix_turn_helix isocitrate lyase regulation Gferi_RS17965 SM00852 Probable molybdopterin binding domain Gferi_RS17975 SM00859 Semialdehyde dehydrogenase, NAD binding domain Gferi_RS18020 SM01001 AIR carboxylase Gferi_RS18030 SM00091 PAS domain Gferi_RS18030 SM00382 ATPases associated with a variety of cellular activities Gferi_RS18060 SM01120 Gferi_RS18060 Gferi_RS18115 SM00857 Resolvase, N terminal domain Gferi_RS18125 SM01059 Chloramphenicol acetyltransferase Gferi_RS18135 SM01059 Chloramphenicol acetyltransferase Gferi_RS18155 SM00382 ATPases associated with a variety of cellular activities Gferi_RS18200 SM00861 Transketolase, pyrimidine binding domain Gferi_RS18270 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Gferi_RS18285 SM00877 Gferi_RS18285 Gferi_RS18290 SM00877 Gferi_RS18290 Gferi_RS18320 SM00877 Gferi_RS18320 Gferi_RS18365 SM00877 Gferi_RS18365 Gferi_RS18380 SM00387 Histidine kinase-like ATPases Gferi_RS18385 SM00342 helix_turn_helix, arabinose operon control protein Gferi_RS18385 SM00448 cheY-homologous receiver domain Gferi_RS18470 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family Gferi_RS18495 SM00347 helix_turn_helix multiple antibiotic resistance protein Gferi_RS18525 SM00562 Gferi_RS18525 Gferi_RS18555 SM00382 ATPases associated with a variety of cellular activities Gferi_RS18725 SM00938 Nitrogen regulatory protein P-II Gferi_RS18730 SM00938 Nitrogen regulatory protein P-II Gferi_RS18755 SM00729 Elongator protein 3, MiaB family, Radical SAM Gferi_RS18765 SM00831 Cation transporter/ATPase, N-terminus Gferi_RS18805 SM00091 PAS domain Gferi_RS18805 SM00382 ATPases associated with a variety of cellular activities Gferi_RS18915 SM00487 DEAD-like helicases superfamily Gferi_RS18915 SM00490 helicase superfamily c-terminal domain Gferi_RS18990 SM00448 cheY-homologous receiver domain Gferi_RS18990 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS18995 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS18995 SM00387 Histidine kinase-like ATPases Gferi_RS18995 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS19000 SM00382 ATPases associated with a variety of cellular activities Gferi_RS19020 SM00342 helix_turn_helix, arabinose operon control protein Gferi_RS19035 SM00345 helix_turn_helix gluconate operon transcriptional repressor Gferi_RS19060 SM00871 Bacterial transcription activator, effector binding domain Gferi_RS19135 SM00345 helix_turn_helix gluconate operon transcriptional repressor Gferi_RS19135 SM00866 Gferi_RS19135 Gferi_RS19150 SM00530 Helix-turn-helix XRE-family like proteins Gferi_RS19160 SM00382 ATPases associated with a variety of cellular activities Gferi_RS19165 SM00852 Probable molybdopterin binding domain Gferi_RS19170 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Gferi_RS19195 SM00729 Elongator protein 3, MiaB family, Radical SAM Gferi_RS19210 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Gferi_RS19215 SM00855 Phosphoglycerate mutase family Gferi_RS19220 SM00382 ATPases associated with a variety of cellular activities Gferi_RS19240 SM00382 ATPases associated with a variety of cellular activities Gferi_RS19265 SM00382 ATPases associated with a variety of cellular activities Gferi_RS19275 SM00530 Helix-turn-helix XRE-family like proteins Gferi_RS19295 SM00873 B3/4 domain Gferi_RS19300 SM00345 helix_turn_helix gluconate operon transcriptional repressor Gferi_RS19335 SM01018 B12 binding domain Gferi_RS19355 SM00422 helix_turn_helix, mercury resistance Gferi_RS19360 SM00363 S4 RNA-binding domain Gferi_RS19380 SM00347 helix_turn_helix multiple antibiotic resistance protein Gferi_RS19395 SM00530 Helix-turn-helix XRE-family like proteins Gferi_RS19400 SM00530 Helix-turn-helix XRE-family like proteins Gferi_RS19405 SM00267 diguanylate cyclase Gferi_RS19450 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Gferi_RS19460 SM00382 ATPases associated with a variety of cellular activities Gferi_RS19475 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Gferi_RS19475 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS19510 SM00382 ATPases associated with a variety of cellular activities Gferi_RS19515 SM00387 Histidine kinase-like ATPases Gferi_RS19515 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS19520 SM00448 cheY-homologous receiver domain Gferi_RS19520 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS19550 SM00984 UDP binding domain Gferi_RS19570 SM00062 Bacterial periplasmic substrate-binding proteins Gferi_RS19570 SM00091 PAS domain Gferi_RS19570 SM00387 Histidine kinase-like ATPases Gferi_RS19570 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS19575 SM00382 ATPases associated with a variety of cellular activities Gferi_RS19575 SM00448 cheY-homologous receiver domain Gferi_RS19610 SM00530 Helix-turn-helix XRE-family like proteins Gferi_RS19615 SM00530 Helix-turn-helix XRE-family like proteins Gferi_RS19620 SM00267 diguanylate cyclase Gferi_RS19660 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Gferi_RS19730 SM01133 Gferi_RS19730 Gferi_RS19750 SM00382 ATPases associated with a variety of cellular activities Gferi_RS19790 SM00345 helix_turn_helix gluconate operon transcriptional repressor Gferi_RS19790 SM00866 Gferi_RS19790 Gferi_RS19795 SM01018 B12 binding domain Gferi_RS19810 SM01018 B12 binding domain Gferi_RS19820 SM00382 ATPases associated with a variety of cellular activities Gferi_RS19855 SM00354 helix_turn _helix lactose operon repressor Gferi_RS19880 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Gferi_RS19890 SM00909 Sporulation and spore germination Gferi_RS19895 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Gferi_RS19895 SM00091 PAS domain Gferi_RS19895 SM00267 diguanylate cyclase Gferi_RS19900 SM00257 Lysin motif Gferi_RS19900 SM00636 Gferi_RS19900 Gferi_RS19915 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Gferi_RS19920 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Gferi_RS19925 SM00342 helix_turn_helix, arabinose operon control protein Gferi_RS19930 SM01018 B12 binding domain Gferi_RS19950 SM01018 B12 binding domain Gferi_RS19985 SM00670 Large family of predicted nucleotide-binding domains Gferi_RS20025 SM00382 ATPases associated with a variety of cellular activities Gferi_RS20030 SM00382 ATPases associated with a variety of cellular activities Gferi_RS20065 SM00382 ATPases associated with a variety of cellular activities Gferi_RS20070 SM00382 ATPases associated with a variety of cellular activities Gferi_RS20080 SM00382 ATPases associated with a variety of cellular activities Gferi_RS20085 SM00382 ATPases associated with a variety of cellular activities Gferi_RS20180 SM00899 Gferi_RS20180 Gferi_RS20195 SM00529 Helix-turn-helix diphteria tox regulatory element Gferi_RS20275 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Gferi_RS20360 SM00481 DNA polymerase alpha chain like domain Gferi_RS20370 SM01321 Gferi_RS20370 Gferi_RS20375 SM00347 helix_turn_helix multiple antibiotic resistance protein Gferi_RS20395 SM00116 Domain in cystathionine beta-synthase and other proteins. Gferi_RS20395 SM00924 MgtE intracellular N domain Gferi_RS20400 SM00116 Domain in cystathionine beta-synthase and other proteins. Gferi_RS20400 SM00924 MgtE intracellular N domain Gferi_RS20405 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Gferi_RS20430 SM00448 cheY-homologous receiver domain Gferi_RS20430 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS20435 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS20435 SM00387 Histidine kinase-like ATPases Gferi_RS20435 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS20445 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS20445 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Gferi_RS20470 SM00116 Domain in cystathionine beta-synthase and other proteins. Gferi_RS20480 SM01005 Alanine racemase, C-terminal domain Gferi_RS20525 SM00984 UDP binding domain Gferi_RS20560 SM00861 Transketolase, pyrimidine binding domain Gferi_RS20590 SM00382 ATPases associated with a variety of cellular activities Gferi_RS20610 SM00478 endonuclease III Gferi_RS20630 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Gferi_RS20630 SM00245 tail specific protease Gferi_RS20635 SM00642 Alpha-amylase domain Gferi_RS20660 SM00642 Alpha-amylase domain Gferi_RS20670 SM00448 cheY-homologous receiver domain Gferi_RS20670 SM00850 LytTr DNA-binding domain Gferi_RS20675 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Gferi_RS20675 SM00091 PAS domain Gferi_RS20675 SM00387 Histidine kinase-like ATPases Gferi_RS20675 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS20675 SM00448 cheY-homologous receiver domain Gferi_RS20680 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Gferi_RS20680 SM00267 diguanylate cyclase Gferi_RS20685 SM00487 DEAD-like helicases superfamily Gferi_RS20685 SM00490 helicase superfamily c-terminal domain Gferi_RS20710 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Gferi_RS20715 SM00902 Iron hydrogenase small subunit Gferi_RS20715 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Gferi_RS20725 SM00729 Elongator protein 3, MiaB family, Radical SAM Gferi_RS20725 SM00876 Biotin and Thiamin Synthesis associated domain Gferi_RS20730 SM00729 Elongator protein 3, MiaB family, Radical SAM Gferi_RS20730 SM00876 Biotin and Thiamin Synthesis associated domain Gferi_RS20735 SM00173 Ras subfamily of RAS small GTPases Gferi_RS20740 SM00465 GIY-YIG type nucleases (URI domain) Gferi_RS20755 SM00852 Probable molybdopterin binding domain Gferi_RS20765 SM00091 PAS domain Gferi_RS20765 SM00382 ATPases associated with a variety of cellular activities Gferi_RS20780 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Gferi_RS20810 SM00382 ATPases associated with a variety of cellular activities Gferi_RS20815 SM00852 Probable molybdopterin binding domain Gferi_RS20820 SM00852 Probable molybdopterin binding domain Gferi_RS20825 SM00729 Elongator protein 3, MiaB family, Radical SAM Gferi_RS20850 SM00354 helix_turn _helix lactose operon repressor Gferi_RS20895 SM00481 DNA polymerase alpha chain like domain Gferi_RS20910 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Gferi_RS20910 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS20940 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Gferi_RS20945 SM00116 Domain in cystathionine beta-synthase and other proteins. Gferi_RS20950 SM00481 DNA polymerase alpha chain like domain Gferi_RS20980 SM00909 Sporulation and spore germination Gferi_RS20995 SM00100 Cyclic nucleotide-monophosphate binding domain Gferi_RS21015 SM01321 Gferi_RS21015 Gferi_RS21030 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS21030 SM00387 Histidine kinase-like ATPases Gferi_RS21030 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS21035 SM00448 cheY-homologous receiver domain Gferi_RS21035 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS21085 SM01252 Gferi_RS21085 Gferi_RS21165 SM00260 Two component signalling adaptor domain Gferi_RS21170 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Gferi_RS21170 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS21175 SM00448 cheY-homologous receiver domain Gferi_RS21175 SM00850 LytTr DNA-binding domain Gferi_RS21180 SM00448 cheY-homologous receiver domain Gferi_RS21180 SM00850 LytTr DNA-binding domain Gferi_RS21190 SM00989 Gferi_RS21190 Gferi_RS21195 SM00267 diguanylate cyclase Gferi_RS21200 SM00052 Putative diguanylate phosphodiesterase Gferi_RS21270 SM00347 helix_turn_helix multiple antibiotic resistance protein Gferi_RS21300 SM00345 helix_turn_helix gluconate operon transcriptional repressor Gferi_RS21335 SM00382 ATPases associated with a variety of cellular activities Gferi_RS21410 SM00382 ATPases associated with a variety of cellular activities Gferi_RS21420 SM00422 helix_turn_helix, mercury resistance Gferi_RS21445 SM01321 Gferi_RS21445 Gferi_RS21485 SM01321 Gferi_RS21485 Gferi_RS21490 SM00448 cheY-homologous receiver domain Gferi_RS21490 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS21495 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS21495 SM00387 Histidine kinase-like ATPases Gferi_RS21495 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS21515 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS21525 SM00060 Fibronectin type 3 domain Gferi_RS21530 SM00900 Gferi_RS21530 Gferi_RS21535 SM00529 Helix-turn-helix diphteria tox regulatory element Gferi_RS21545 SM00342 helix_turn_helix, arabinose operon control protein Gferi_RS21615 SM00387 Histidine kinase-like ATPases Gferi_RS21640 SM00487 DEAD-like helicases superfamily Gferi_RS21665 SM00530 Helix-turn-helix XRE-family like proteins Gferi_RS21710 SM00342 helix_turn_helix, arabinose operon control protein Gferi_RS21710 SM00871 Bacterial transcription activator, effector binding domain Gferi_RS21715 SM00422 helix_turn_helix, mercury resistance Gferi_RS21750 SM00387 Histidine kinase-like ATPases Gferi_RS21750 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS21755 SM00448 cheY-homologous receiver domain Gferi_RS21755 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS21760 SM00422 helix_turn_helix, mercury resistance Gferi_RS21765 SM00382 ATPases associated with a variety of cellular activities Gferi_RS21785 SM00342 helix_turn_helix, arabinose operon control protein Gferi_RS21785 SM00871 Bacterial transcription activator, effector binding domain Gferi_RS21790 SM00347 helix_turn_helix multiple antibiotic resistance protein Gferi_RS21815 SM00327 von Willebrand factor (vWF) type A domain Gferi_RS21815 SM00429 ig-like, plexins, transcription factors Gferi_RS21820 SM00448 cheY-homologous receiver domain Gferi_RS21825 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Gferi_RS21855 SM00382 ATPases associated with a variety of cellular activities Gferi_RS21860 SM00382 ATPases associated with a variety of cellular activities Gferi_RS21865 SM00530 Helix-turn-helix XRE-family like proteins Gferi_RS21890 SM00382 ATPases associated with a variety of cellular activities Gferi_RS21910 SM00342 helix_turn_helix, arabinose operon control protein Gferi_RS21910 SM00871 Bacterial transcription activator, effector binding domain Gferi_RS21925 SM00347 helix_turn_helix multiple antibiotic resistance protein Gferi_RS21965 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Gferi_RS21965 SM00091 PAS domain Gferi_RS21965 SM00267 diguanylate cyclase Gferi_RS21995 SM00342 helix_turn_helix, arabinose operon control protein Gferi_RS22000 SM00342 helix_turn_helix, arabinose operon control protein Gferi_RS22005 SM00421 helix_turn_helix, Lux Regulon Gferi_RS22020 SM00710 Parallel beta-helix repeats Gferi_RS22050 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Gferi_RS22055 SM01092 CO dehydrogenase flavoprotein C-terminal domain Gferi_RS22085 SM00345 helix_turn_helix gluconate operon transcriptional repressor Gferi_RS22085 SM00895 Gferi_RS22085 Gferi_RS22100 SM00448 cheY-homologous receiver domain Gferi_RS22100 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS22105 SM00387 Histidine kinase-like ATPases Gferi_RS22105 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS22120 SM00382 ATPases associated with a variety of cellular activities Gferi_RS22150 SM00382 ATPases associated with a variety of cellular activities Gferi_RS22195 SM00729 Elongator protein 3, MiaB family, Radical SAM Gferi_RS22205 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain Gferi_RS22240 SM00342 helix_turn_helix, arabinose operon control protein Gferi_RS22245 SM00382 ATPases associated with a variety of cellular activities Gferi_RS22250 SM00382 ATPases associated with a variety of cellular activities Gferi_RS22260 SM00342 helix_turn_helix, arabinose operon control protein Gferi_RS22275 SM00382 ATPases associated with a variety of cellular activities Gferi_RS22280 SM00382 ATPases associated with a variety of cellular activities Gferi_RS22295 SM00363 S4 RNA-binding domain Gferi_RS22295 SM01390 Gferi_RS22295 Gferi_RS22305 SM00342 helix_turn_helix, arabinose operon control protein Gferi_RS22320 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain Gferi_RS22340 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain Gferi_RS22350 SM00829 Enoylreductase Gferi_RS22375 SM00382 ATPases associated with a variety of cellular activities Gferi_RS22400 SM00267 diguanylate cyclase Gferi_RS22400 SM00387 Histidine kinase-like ATPases Gferi_RS22400 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS22400 SM00448 cheY-homologous receiver domain Gferi_RS22405 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS22410 SM00448 cheY-homologous receiver domain Gferi_RS22410 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS22415 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS22415 SM00387 Histidine kinase-like ATPases Gferi_RS22415 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS22455 SM01409 Gferi_RS22455 Gferi_RS22460 SM00422 helix_turn_helix, mercury resistance Gferi_RS22490 SM00530 Helix-turn-helix XRE-family like proteins Gferi_RS22510 SM00382 ATPases associated with a variety of cellular activities Gferi_RS22515 SM00382 ATPases associated with a variety of cellular activities Gferi_RS22535 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain Gferi_RS22540 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain Gferi_RS22560 SM00448 cheY-homologous receiver domain Gferi_RS22560 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS22565 SM00387 Histidine kinase-like ATPases Gferi_RS22570 SM00382 ATPases associated with a variety of cellular activities Gferi_RS22580 SM00342 helix_turn_helix, arabinose operon control protein Gferi_RS22590 SM01130 Gferi_RS22590 Gferi_RS22650 SM00861 Transketolase, pyrimidine binding domain Gferi_RS22665 SM00646 Gferi_RS22665 Gferi_RS22685 SM00382 ATPases associated with a variety of cellular activities Gferi_RS22725 SM00382 ATPases associated with a variety of cellular activities Gferi_RS22785 SM00382 ATPases associated with a variety of cellular activities Gferi_RS22825 SM00345 helix_turn_helix gluconate operon transcriptional repressor Gferi_RS22825 SM00895 Gferi_RS22825 Gferi_RS22830 SM00346 helix_turn_helix isocitrate lyase regulation Gferi_RS22885 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Gferi_RS22890 SM00902 Iron hydrogenase small subunit Gferi_RS22890 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Gferi_RS22895 SM00871 Bacterial transcription activator, effector binding domain Gferi_RS22910 SM00729 Elongator protein 3, MiaB family, Radical SAM Gferi_RS22920 SM00014 Acid phosphatase homologues Gferi_RS22930 SM00873 B3/4 domain Gferi_RS22950 SM00257 Lysin motif Gferi_RS22950 SM00631 Gferi_RS22950 Gferi_RS22955 SM00257 Lysin motif Gferi_RS22960 SM00257 Lysin motif Gferi_RS22990 SM00052 Putative diguanylate phosphodiesterase Gferi_RS22990 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Gferi_RS22990 SM00091 PAS domain Gferi_RS22990 SM00267 diguanylate cyclase Gferi_RS23000 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Gferi_RS23000 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS23025 SM00100 Cyclic nucleotide-monophosphate binding domain Gferi_RS23060 SM00487 DEAD-like helicases superfamily Gferi_RS23060 SM00490 helicase superfamily c-terminal domain Gferi_RS23080 SM00481 DNA polymerase alpha chain like domain Gferi_RS23100 SM00770 Zinc dependent phospholipase C (alpha toxin) Gferi_RS23115 SM00387 Histidine kinase-like ATPases Gferi_RS23120 SM00448 cheY-homologous receiver domain Gferi_RS23120 SM00850 LytTr DNA-binding domain Gferi_RS23165 SM00357 Cold shock protein domain Gferi_RS23190 SM00729 Elongator protein 3, MiaB family, Radical SAM Gferi_RS23210 SM00861 Transketolase, pyrimidine binding domain Gferi_RS23225 SM00257 Lysin motif Gferi_RS23235 SM00954 Region found in RelA / SpoT proteins Gferi_RS23245 SM00903 Flavin reductase like domain Gferi_RS23335 SM00857 Resolvase, N terminal domain Gferi_RS23350 SM01022 Gferi_RS23350 Gferi_RS23360 SM00530 Helix-turn-helix XRE-family like proteins Gferi_RS23415 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Gferi_RS23415 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS23430 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Gferi_RS23515 SM00990 Gferi_RS23515 Gferi_RS23550 SM00470 ParB-like nuclease domain Gferi_RS23670 SM00257 Lysin motif Gferi_RS23670 SM00644 Gferi_RS23670 Gferi_RS23695 SM00482 DNA polymerase A domain Gferi_RS23705 SM00857 Resolvase, N terminal domain Gferi_RS23715 SM00857 Resolvase, N terminal domain Gferi_RS23720 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Gferi_RS23825 SM00873 B3/4 domain Gferi_RS23835 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Gferi_RS23925 SM00530 Helix-turn-helix XRE-family like proteins Gferi_RS23960 SM00382 ATPases associated with a variety of cellular activities Gferi_RS23990 SM00530 Helix-turn-helix XRE-family like proteins Gferi_RS23995 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Gferi_RS24040 SM00363 S4 RNA-binding domain Gferi_RS24060 SM00363 S4 RNA-binding domain Gferi_RS24070 SM00116 Domain in cystathionine beta-synthase and other proteins. Gferi_RS24075 SM00382 ATPases associated with a variety of cellular activities Gferi_RS24090 SM00331 Sigma factor PP2C-like phosphatases Gferi_RS24100 SM00518 AP endonuclease family 2 Gferi_RS24135 SM00857 Resolvase, N terminal domain Gferi_RS24155 SM00478 endonuclease III Gferi_RS24155 SM00525 Gferi_RS24155 Gferi_RS24160 SM00842 Cell division protein FtsA Gferi_RS24170 SM01208 Gferi_RS24170 Gferi_RS24205 SM00855 Phosphoglycerate mutase family Gferi_RS24305 SM01004 Delta-aminolevulinic acid dehydratase Gferi_RS24320 SM00382 ATPases associated with a variety of cellular activities Gferi_RS24330 SM00460 Transglutaminase/protease-like homologues Gferi_RS24435 SM00382 ATPases associated with a variety of cellular activities Gferi_RS24460 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Gferi_RS24475 SM01192 Gferi_RS24475 Gferi_RS24475 SM01193 Gferi_RS24475 Gferi_RS24495 SM00316 Ribosomal protein S1-like RNA-binding domain Gferi_RS24495 SM00357 Cold shock protein domain Gferi_RS24495 SM00955 Gferi_RS24495 Gferi_RS24525 SM01321 Gferi_RS24525 Gferi_RS24540 SM00448 cheY-homologous receiver domain Gferi_RS24540 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS24545 SM00387 Histidine kinase-like ATPases Gferi_RS24545 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS24560 SM00448 cheY-homologous receiver domain Gferi_RS24560 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS24565 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS24565 SM00387 Histidine kinase-like ATPases Gferi_RS24565 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS24585 SM00382 ATPases associated with a variety of cellular activities Gferi_RS24670 SM00849 Metallo-beta-lactamase superfamily Gferi_RS24690 SM00382 ATPases associated with a variety of cellular activities Gferi_RS24725 SM00903 Flavin reductase like domain Gferi_RS24755 SM00530 Helix-turn-helix XRE-family like proteins Gferi_RS24800 SM00382 ATPases associated with a variety of cellular activities Gferi_RS24805 SM00382 ATPases associated with a variety of cellular activities Gferi_RS24825 SM00382 ATPases associated with a variety of cellular activities Gferi_RS24830 SM00382 ATPases associated with a variety of cellular activities Gferi_RS24835 SM00481 DNA polymerase alpha chain like domain Gferi_RS24840 SM00420 helix_turn_helix, Deoxyribose operon repressor Gferi_RS24840 SM01134 Gferi_RS24840 Gferi_RS24880 SM00091 PAS domain Gferi_RS24880 SM00382 ATPases associated with a variety of cellular activities Gferi_RS24895 SM00861 Transketolase, pyrimidine binding domain Gferi_RS24925 SM00387 Histidine kinase-like ATPases Gferi_RS24925 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS24930 SM00448 cheY-homologous receiver domain Gferi_RS24930 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS24955 SM01325 Gferi_RS24955 Gferi_RS24960 SM00854 Bacterial capsule synthesis protein PGA_cap Gferi_RS24985 SM00100 Cyclic nucleotide-monophosphate binding domain Gferi_RS24985 SM00419 helix_turn_helix, cAMP Regulatory protein Gferi_RS24990 SM00342 helix_turn_helix, arabinose operon control protein Gferi_RS25005 SM01061 CAT RNA binding domain Gferi_RS25040 SM01092 CO dehydrogenase flavoprotein C-terminal domain Gferi_RS25050 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Gferi_RS25135 SM00347 helix_turn_helix multiple antibiotic resistance protein Gferi_RS25155 SM00244 prohibitin homologues Gferi_RS25160 SM00244 prohibitin homologues Gferi_RS25165 SM00344 helix_turn_helix ASNC type Gferi_RS25210 SM00382 ATPases associated with a variety of cellular activities Gferi_RS25215 SM00382 ATPases associated with a variety of cellular activities Gferi_RS25245 SM00354 helix_turn _helix lactose operon repressor Gferi_RS25255 SM00382 ATPases associated with a variety of cellular activities Gferi_RS25280 SM00729 Elongator protein 3, MiaB family, Radical SAM Gferi_RS25285 SM00487 DEAD-like helicases superfamily Gferi_RS25285 SM00490 helicase superfamily c-terminal domain Gferi_RS25290 SM00091 PAS domain Gferi_RS25290 SM00382 ATPases associated with a variety of cellular activities Gferi_RS25295 SM00919 Malic enzyme, NAD binding domain Gferi_RS25295 SM01274 Gferi_RS25295 Gferi_RS25315 SM01329 Gferi_RS25315 Gferi_RS25325 SM00091 PAS domain Gferi_RS25325 SM00382 ATPases associated with a variety of cellular activities Gferi_RS25365 SM01043 Bacterial transcriptional activator domain Gferi_RS25385 SM00060 Fibronectin type 3 domain Gferi_RS25400 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Gferi_RS25430 SM00905 Dihydroneopterin aldolase Gferi_RS25475 SM00382 ATPases associated with a variety of cellular activities Gferi_RS25480 SM00387 Histidine kinase-like ATPases Gferi_RS25480 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS25485 SM00448 cheY-homologous receiver domain Gferi_RS25485 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS25515 SM00382 ATPases associated with a variety of cellular activities Gferi_RS25530 SM00890 Domain of unknown function Gferi_RS25550 SM00487 DEAD-like helicases superfamily Gferi_RS25550 SM00490 helicase superfamily c-terminal domain Gferi_RS25555 SM00267 diguanylate cyclase Gferi_RS25590 SM01007 Class II Aldolase and Adducin N-terminal domain Gferi_RS25605 SM00382 ATPases associated with a variety of cellular activities Gferi_RS25625 SM00829 Enoylreductase Gferi_RS25650 SM00382 ATPases associated with a variety of cellular activities Gferi_RS25670 SM01007 Class II Aldolase and Adducin N-terminal domain Gferi_RS25680 SM00859 Semialdehyde dehydrogenase, NAD binding domain Gferi_RS25695 SM00895 Gferi_RS25695 Gferi_RS25705 SM01130 Gferi_RS25705 Gferi_RS25790 SM00382 ATPases associated with a variety of cellular activities Gferi_RS25795 SM00646 Gferi_RS25795 Gferi_RS25870 SM00448 cheY-homologous receiver domain Gferi_RS25870 SM00850 LytTr DNA-binding domain Gferi_RS25875 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Gferi_RS25875 SM00091 PAS domain Gferi_RS25875 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS25875 SM00387 Histidine kinase-like ATPases Gferi_RS25875 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS25880 SM00382 ATPases associated with a variety of cellular activities Gferi_RS25880 SM00448 cheY-homologous receiver domain Gferi_RS25895 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain Gferi_RS25905 SM00345 helix_turn_helix gluconate operon transcriptional repressor Gferi_RS25910 SM01002 Alanine dehydrogenase/PNT, C-terminal domain Gferi_RS25910 SM01003 Alanine dehydrogenase/PNT, N-terminal domain Gferi_RS25930 SM00347 helix_turn_helix multiple antibiotic resistance protein Gferi_RS25935 SM00028 Tetratricopeptide repeats Gferi_RS25935 SM00220 Serine/Threonine protein kinases, catalytic domain Gferi_RS25935 SM00267 diguanylate cyclase Gferi_RS25940 SM00354 helix_turn _helix lactose operon repressor Gferi_RS25950 SM00729 Elongator protein 3, MiaB family, Radical SAM Gferi_RS25965 SM00260 Two component signalling adaptor domain Gferi_RS25975 SM00387 Histidine kinase-like ATPases Gferi_RS25980 SM00421 helix_turn_helix, Lux Regulon Gferi_RS25980 SM00448 cheY-homologous receiver domain Gferi_RS26010 SM00342 helix_turn_helix, arabinose operon control protein Gferi_RS26010 SM00448 cheY-homologous receiver domain Gferi_RS26015 SM00877 Gferi_RS26015 Gferi_RS26020 SM00877 Gferi_RS26020 Gferi_RS26050 SM00877 Gferi_RS26050 Gferi_RS26055 SM00877 Gferi_RS26055 Gferi_RS26095 SM00877 Gferi_RS26095 Gferi_RS26130 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs Gferi_RS26130 SM00474 3'-5' exonuclease Gferi_RS26130 SM00475 5'-3' exonuclease Gferi_RS26130 SM00482 DNA polymerase A domain Gferi_RS26175 SM00287 Bacterial SH3 domain homologues Gferi_RS26210 SM00481 DNA polymerase alpha chain like domain Gferi_RS26215 SM00387 Histidine kinase-like ATPases Gferi_RS26230 SM00900 Gferi_RS26230 Gferi_RS26310 SM00851 MGS-like domain Gferi_RS26340 SM00729 Elongator protein 3, MiaB family, Radical SAM Gferi_RS26350 SM00316 Ribosomal protein S1-like RNA-binding domain Gferi_RS26380 SM01103 Gferi_RS26380 Gferi_RS26395 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Gferi_RS26435 SM00936 Penicillin-binding protein 5, C-terminal domain Gferi_RS26440 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Gferi_RS26460 SM00448 cheY-homologous receiver domain Gferi_RS26460 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS26465 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Gferi_RS26465 SM00387 Histidine kinase-like ATPases Gferi_RS26465 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS26470 SM00909 Sporulation and spore germination Gferi_RS26605 SM00382 ATPases associated with a variety of cellular activities Gferi_RS26630 SM01323 Gferi_RS26630 Gferi_RS26675 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Gferi_RS26675 SM00954 Region found in RelA / SpoT proteins Gferi_RS26685 SM00849 Metallo-beta-lactamase superfamily Gferi_RS26695 SM00729 Elongator protein 3, MiaB family, Radical SAM Gferi_RS26735 SM00091 PAS domain Gferi_RS26735 SM00382 ATPases associated with a variety of cellular activities Gferi_RS26790 SM00382 ATPases associated with a variety of cellular activities Gferi_RS26855 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Gferi_RS26875 SM00732 Likely ribonuclease with RNase H fold. Gferi_RS26895 SM00849 Metallo-beta-lactamase superfamily Gferi_RS26945 SM00857 Resolvase, N terminal domain Gferi_RS26970 SM00854 Bacterial capsule synthesis protein PGA_cap Gferi_RS26995 SM00448 cheY-homologous receiver domain Gferi_RS26995 SM00862 Transcriptional regulatory protein, C terminal Gferi_RS27000 SM00387 Histidine kinase-like ATPases Gferi_RS27000 SM00388 His Kinase A (phosphoacceptor) domain Gferi_RS27070 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Gferi_RS27125 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Gferi_RS27135 SM00347 helix_turn_helix multiple antibiotic resistance protein Gferi_RS27140 SM00825 Beta-ketoacyl synthase Gferi_RS27145 SM00822 Gferi_RS27145 Gferi_RS27175 SM00845 GatB domain Gferi_RS27185 SM00257 Lysin motif Gferi_RS27210 SM00382 ATPases associated with a variety of cellular activities Gferi_RS27225 SM00853 MutL C terminal dimerisation domain Gferi_RS27225 SM01340 Gferi_RS27225 Gferi_RS27230 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Gferi_RS27230 SM00534 ATPase domain of DNA mismatch repair MUTS family Gferi_RS27235 SM00729 Elongator protein 3, MiaB family, Radical SAM