locus-tag class description C3363_RS00005 PF11638 DnaA N-terminal domain C3363_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix C3363_RS00005 PF00308 Bacterial dnaA protein C3363_RS00010 PF02767 DNA polymerase III beta subunit, central domain C3363_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain C3363_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain C3363_RS00015 PF02325 YGGT family C3363_RS00020 PF02594 Uncharacterised ACR, YggU family COG1872 C3363_RS00025 PF01578 Cytochrome C assembly protein C3363_RS00030 PF01595 Cyclin M transmembrane N-terminal domain C3363_RS00030 PF03471 Transporter associated domain C3363_RS00030 PF00571 CBS domain C3363_RS00040 PF00448 SRP54-type protein, GTPase domain C3363_RS00040 PF02978 Signal peptide binding domain C3363_RS00040 PF02881 SRP54-type protein, helical bundle domain C3363_RS00045 PF00258 Flavodoxin C3363_RS00050 PF00665 Integrase core domain C3363_RS00050 PF13936 Helix-turn-helix domain C3363_RS00055 PF13018 Extended Signal Peptide of Type V secretion system C3363_RS00055 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin C3363_RS00055 PF03895 YadA-like membrane anchor domain C3363_RS00055 PF05662 Coiled stalk of trimeric autotransporter adhesin C3363_RS00060 PF05658 Head domain of trimeric autotransporter adhesin C3363_RS00060 PF13018 Extended Signal Peptide of Type V secretion system C3363_RS00060 PF03895 YadA-like membrane anchor domain C3363_RS00060 PF05662 Coiled stalk of trimeric autotransporter adhesin C3363_RS00060 PF05658 Head domain of trimeric autotransporter adhesin C3363_RS00060 PF05662 Coiled stalk of trimeric autotransporter adhesin C3363_RS00060 PF13018 Extended Signal Peptide of Type V secretion system C3363_RS00060 PF03895 YadA-like membrane anchor domain C3363_RS00065 PF00132 Bacterial transferase hexapeptide (six repeats) C3363_RS00065 PF06426 Serine acetyltransferase, N-terminal C3363_RS00070 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C3363_RS00070 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C3363_RS00075 PF00072 Response regulator receiver domain C3363_RS00075 PF00486 Transcriptional regulatory protein, C terminal C3363_RS00080 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C3363_RS00080 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region C3363_RS00085 PF02152 Dihydroneopterin aldolase C3363_RS00090 PF02660 Glycerol-3-phosphate acyltransferase C3363_RS00095 PF02527 rRNA small subunit methyltransferase G C3363_RS00100 PF08780 Nucleotidyltransferase substrate binding protein like C3363_RS00105 PF13932 GidA associated domain C3363_RS00105 PF01134 Glucose inhibited division protein A C3363_RS00110 PF08220 DeoR-like helix-turn-helix domain C3363_RS00110 PF00455 DeoR C terminal sensor domain C3363_RS00115 PF05643 Putative bacterial lipoprotein (DUF799) C3363_RS00125 PF03783 Curli production assembly/transport component CsgG C3363_RS00130 PF07882 L-fucose isomerase, second N-terminal domain C3363_RS00130 PF07881 L-fucose isomerase, first N-terminal domain C3363_RS00130 PF02952 L-fucose isomerase, C-terminal domain C3363_RS00135 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C3363_RS00135 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C3363_RS00140 PF05025 RbsD / FucU transport protein family C3363_RS00145 PF00596 Class II Aldolase and Adducin N-terminal domain C3363_RS00155 PF00294 pfkB family carbohydrate kinase C3363_RS00160 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C3363_RS00160 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C3363_RS00160 PF00205 Thiamine pyrophosphate enzyme, central domain C3363_RS00165 PF01261 Xylose isomerase-like TIM barrel C3363_RS00170 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C3363_RS00170 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C3363_RS00175 PF02378 Phosphotransferase system, EIIC C3363_RS00185 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C3363_RS00185 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C3363_RS00190 PF02653 Branched-chain amino acid transport system / permease component C3363_RS00195 PF00005 ABC transporter C3363_RS00200 PF13407 Periplasmic binding protein domain C3363_RS00205 PF00171 Aldehyde dehydrogenase family C3363_RS00210 PF04962 KduI/IolB family C3363_RS00215 PF04077 DsrH like protein C3363_RS00220 PF02635 DsrE/DsrF-like family C3363_RS00225 PF02635 DsrE/DsrF-like family C3363_RS00230 PF08348 YheO-like PAS domain C3363_RS00230 PF13309 HTH domain C3363_RS00235 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C3363_RS00235 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C3363_RS00240 PF04102 SlyX C3363_RS00250 PF01048 Phosphorylase superfamily C3363_RS00255 PF00919 Uncharacterized protein family UPF0004 C3363_RS00255 PF04055 Radical SAM superfamily C3363_RS00255 PF18693 TRAM domain C3363_RS00260 PF02091 Glycyl-tRNA synthetase alpha subunit C3363_RS00275 PF04480 Protein of unknown function (DUF559) C3363_RS00285 PF05746 DALR anticodon binding domain C3363_RS00285 PF02092 Glycyl-tRNA synthetase beta subunit C3363_RS00290 PF00202 Aminotransferase class-III C3363_RS00295 PF00155 Aminotransferase class I and II C3363_RS00300 PF04301 Protein of unknown function (DUF452) C3363_RS00305 PF08241 Methyltransferase domain C3363_RS00320 PF02899 Phage integrase, N-terminal SAM-like domain C3363_RS00320 PF00589 Phage integrase family C3363_RS00325 PF04545 Sigma-70, region 4 C3363_RS00325 PF04542 Sigma-70 region 2 C3363_RS00325 PF00140 Sigma-70 factor, region 1.2 C3363_RS00340 PF05662 Coiled stalk of trimeric autotransporter adhesin C3363_RS00340 PF05658 Head domain of trimeric autotransporter adhesin C3363_RS00340 PF03895 YadA-like membrane anchor domain C3363_RS00340 PF13018 Extended Signal Peptide of Type V secretion system C3363_RS00360 PF05662 Coiled stalk of trimeric autotransporter adhesin C3363_RS00360 PF03895 YadA-like membrane anchor domain C3363_RS00360 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin C3363_RS00360 PF13018 Extended Signal Peptide of Type V secretion system C3363_RS00370 PF00005 ABC transporter C3363_RS00375 PF01032 FecCD transport family C3363_RS00380 PF01497 Periplasmic binding protein C3363_RS00385 PF02481 DNA recombination-mediator protein A C3363_RS00385 PF17782 DprA winged helix domain C3363_RS00390 PF01327 Polypeptide deformylase C3363_RS00395 PF01370 NAD dependent epimerase/dehydratase family C3363_RS00410 PF01381 Helix-turn-helix C3363_RS00445 PF03592 Terminase small subunit C3363_RS00480 PF00589 Phage integrase family C3363_RS00480 PF13356 Arm DNA-binding domain C3363_RS00480 PF14659 Phage integrase, N-terminal SAM-like domain C3363_RS00490 PF12390 Selenocysteine synthase N terminal C3363_RS00490 PF03841 L-seryl-tRNA selenium transferase C3363_RS00495 PF00009 Elongation factor Tu GTP binding domain C3363_RS00495 PF03144 Elongation factor Tu domain 2 C3363_RS00495 PF09106 Elongation factor SelB, winged helix C3363_RS00495 PF09107 Elongation factor SelB, winged helix C3363_RS00500 PF10385 RNA polymerase beta subunit external 1 domain C3363_RS00500 PF04560 RNA polymerase Rpb2, domain 7 C3363_RS00500 PF00562 RNA polymerase Rpb2, domain 6 C3363_RS00500 PF04565 RNA polymerase Rpb2, domain 3 C3363_RS00500 PF04561 RNA polymerase Rpb2, domain 2 C3363_RS00500 PF04563 RNA polymerase beta subunit C3363_RS00505 PF04997 RNA polymerase Rpb1, domain 1 C3363_RS00505 PF05000 RNA polymerase Rpb1, domain 4 C3363_RS00505 PF00623 RNA polymerase Rpb1, domain 2 C3363_RS00505 PF04998 RNA polymerase Rpb1, domain 5 C3363_RS00505 PF04983 RNA polymerase Rpb1, domain 3 C3363_RS00510 PF02463 RecF/RecN/SMC N terminal domain C3363_RS00515 PF04320 Protein with unknown function (DUF469) C3363_RS00520 PF02390 Putative methyltransferase C3363_RS00525 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C3363_RS00525 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C3363_RS00530 PF00580 UvrD/REP helicase N-terminal domain C3363_RS00530 PF13361 UvrD-like helicase C-terminal domain C3363_RS00590 PF02899 Phage integrase, N-terminal SAM-like domain C3363_RS00590 PF00589 Phage integrase family C3363_RS00600 PF00293 NUDIX domain C3363_RS00605 PF06146 Phosphate-starvation-inducible E C3363_RS00610 PF01648 4'-phosphopantetheinyl transferase superfamily C3363_RS00615 PF16320 Ribosomal protein L7/L12 dimerisation domain C3363_RS00615 PF00542 Ribosomal protein L7/L12 C-terminal domain C3363_RS00620 PF00466 Ribosomal protein L10 C3363_RS00625 PF01467 Cytidylyltransferase-like C3363_RS00630 PF00534 Glycosyl transferases group 1 C3363_RS00630 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) C3363_RS00635 PF07733 Bacterial DNA polymerase III alpha NTPase domain C3363_RS00635 PF01336 OB-fold nucleic acid binding domain C3363_RS00635 PF14579 Helix-hairpin-helix motif C3363_RS00635 PF02811 PHP domain C3363_RS00635 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C3363_RS00645 PF02463 RecF/RecN/SMC N terminal domain C3363_RS00650 PF03739 Lipopolysaccharide export system permease LptF/LptG C3363_RS00655 PF03739 Lipopolysaccharide export system permease LptF/LptG C3363_RS00660 PF00883 Cytosol aminopeptidase family, catalytic domain C3363_RS00660 PF02789 Cytosol aminopeptidase family, N-terminal domain C3363_RS00670 PF01431 Peptidase family M13 C3363_RS00670 PF05649 Peptidase family M13 C3363_RS00675 PF00378 Enoyl-CoA hydratase/isomerase C3363_RS00690 PF02525 Flavodoxin-like fold C3363_RS00700 PF01196 Ribosomal protein L17 C3363_RS00705 PF01000 RNA polymerase Rpb3/RpoA insert domain C3363_RS00705 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C3363_RS00705 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C3363_RS00710 PF01479 S4 domain C3363_RS00710 PF00163 Ribosomal protein S4/S9 N-terminal domain C3363_RS00715 PF00411 Ribosomal protein S11 C3363_RS00720 PF00416 Ribosomal protein S13/S18 C3363_RS00725 PF00444 Ribosomal protein L36 C3363_RS00730 PF00344 SecY translocase C3363_RS00735 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A C3363_RS00740 PF00327 Ribosomal protein L30p/L7e C3363_RS00745 PF00333 Ribosomal protein S5, N-terminal domain C3363_RS00745 PF03719 Ribosomal protein S5, C-terminal domain C3363_RS00750 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast C3363_RS00755 PF00347 Ribosomal protein L6 C3363_RS00760 PF00410 Ribosomal protein S8 C3363_RS00765 PF00253 Ribosomal protein S14p/S29e C3363_RS00770 PF00673 ribosomal L5P family C-terminus C3363_RS00770 PF00281 Ribosomal protein L5 C3363_RS00775 PF00467 KOW motif C3363_RS00775 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 C3363_RS00780 PF00238 Ribosomal protein L14p/L23e C3363_RS00820 PF02557 D-alanyl-D-alanine carboxypeptidase C3363_RS00825 PF00005 ABC transporter C3363_RS00825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C3363_RS00830 PF00528 Binding-protein-dependent transport system inner membrane component C3363_RS00835 PF00528 Binding-protein-dependent transport system inner membrane component C3363_RS00840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3363_RS00845 PF03459 TOBE domain C3363_RS00845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3363_RS00860 PF00303 Thymidylate synthase C3363_RS00890 PF10881 Protein of unknown function (DUF2726) C3363_RS00895 PF01259 SAICAR synthetase C3363_RS00900 PF02592 Putative vitamin uptake transporter C3363_RS00905 PF07687 Peptidase dimerisation domain C3363_RS00905 PF01546 Peptidase family M20/M25/M40 C3363_RS00910 PF00156 Phosphoribosyl transferase domain C3363_RS00915 PF00625 Guanylate kinase C3363_RS00920 PF18073 Rubredoxin metal binding domain C3363_RS00930 PF04480 Protein of unknown function (DUF559) C3363_RS00935 PF00437 Type II/IV secretion system protein C3363_RS00935 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C3363_RS00940 PF00482 Type II secretion system (T2SS), protein F C3363_RS00950 PF01546 Peptidase family M20/M25/M40 C3363_RS00950 PF07687 Peptidase dimerisation domain C3363_RS00955 PF06689 ClpX C4-type zinc finger C3363_RS00955 PF10431 C-terminal, D2-small domain, of ClpB protein C3363_RS00955 PF07724 AAA domain (Cdc48 subfamily) C3363_RS00960 PF00574 Clp protease C3363_RS00965 PF02657 Fe-S metabolism associated domain C3363_RS00975 PF01300 Telomere recombination C3363_RS00980 PF01479 S4 domain C3363_RS00980 PF00849 RNA pseudouridylate synthase C3363_RS00995 PF00425 chorismate binding enzyme C3363_RS00995 PF04715 Anthranilate synthase component I, N terminal region C3363_RS01000 PF00117 Glutamine amidotransferase class-I C3363_RS01005 PF02885 Glycosyl transferase family, helical bundle domain C3363_RS01005 PF00591 Glycosyl transferase family, a/b domain C3363_RS01010 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase C3363_RS01010 PF00218 Indole-3-glycerol phosphate synthase C3363_RS01015 PF00291 Pyridoxal-phosphate dependent enzyme C3363_RS01020 PF00290 Tryptophan synthase alpha chain C3363_RS01025 PF02635 DsrE/DsrF-like family C3363_RS01045 PF12728 Helix-turn-helix domain C3363_RS01045 PF02661 Fic/DOC family C3363_RS01055 PF08264 Anticodon-binding domain of tRNA C3363_RS01055 PF00133 tRNA synthetases class I (I, L, M and V) C3363_RS01055 PF10458 Valyl tRNA synthetase tRNA binding arm C3363_RS01060 PF04393 Protein of unknown function (DUF535) C3363_RS01075 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal C3363_RS01075 PF02769 AIR synthase related protein, C-terminal domain C3363_RS01075 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain C3363_RS01080 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) C3363_RS01085 PF12724 Flavodoxin domain C3363_RS01090 PF00037 4Fe-4S binding domain C3363_RS01095 PF01467 Cytidylyltransferase-like C3363_RS01095 PF13521 AAA domain C3363_RS01100 PF00149 Calcineurin-like phosphoesterase C3363_RS01105 PF03144 Elongation factor Tu domain 2 C3363_RS01105 PF16658 Class II release factor RF3, C-terminal domain C3363_RS01105 PF00009 Elongation factor Tu GTP binding domain C3363_RS01110 PF08032 RNA 2'-O ribose methyltransferase substrate binding C3363_RS01110 PF00588 SpoU rRNA Methylase family C3363_RS01120 PF03143 Elongation factor Tu C-terminal domain C3363_RS01120 PF00009 Elongation factor Tu GTP binding domain C3363_RS01120 PF03144 Elongation factor Tu domain 2 C3363_RS01125 PF03144 Elongation factor Tu domain 2 C3363_RS01125 PF00009 Elongation factor Tu GTP binding domain C3363_RS01125 PF03764 Elongation factor G, domain IV C3363_RS01125 PF14492 Elongation Factor G, domain II C3363_RS01125 PF00679 Elongation factor G C-terminus C3363_RS01130 PF00177 Ribosomal protein S7p/S5e C3363_RS01135 PF00164 Ribosomal protein S12/S23 C3363_RS01150 PF05958 tRNA (Uracil-5-)-methyltransferase C3363_RS01155 PF04219 Protein of unknown function, DUF C3363_RS01160 PF01048 Phosphorylase superfamily C3363_RS01165 PF01037 Lrp/AsnC ligand binding domain C3363_RS01165 PF13404 AsnC-type helix-turn-helix domain C3363_RS01170 PF03590 Aspartate-ammonia ligase C3363_RS01175 PF01609 Transposase DDE domain C3363_RS01175 PF13808 DDE_Tnp_1-associated C3363_RS01195 PF13651 Adenine-specific methyltransferase EcoRI C3363_RS01220 PF00872 Transposase, Mutator family C3363_RS01240 PF00886 Ribosomal protein S16 C3363_RS01245 PF01782 RimM N-terminal domain C3363_RS01245 PF05239 PRC-barrel domain C3363_RS01250 PF01746 tRNA (Guanine-1)-methyltransferase C3363_RS01255 PF01245 Ribosomal protein L19 C3363_RS01260 PF00581 Rhodanese-like domain C3363_RS01260 PF00899 ThiF family C3363_RS01270 PF01245 Ribosomal protein L19 C3363_RS01275 PF08501 Shikimate dehydrogenase substrate binding domain C3363_RS01280 PF00814 Glycoprotease family C3363_RS01285 PF00707 Translation initiation factor IF-3, C-terminal domain C3363_RS01285 PF05198 Translation initiation factor IF-3, N-terminal domain C3363_RS01290 PF01632 Ribosomal protein L35 C3363_RS01295 PF00453 Ribosomal protein L20 C3363_RS01315 PF07687 Peptidase dimerisation domain C3363_RS01315 PF01546 Peptidase family M20/M25/M40 C3363_RS01320 PF00682 HMGL-like C3363_RS01320 PF08502 LeuA allosteric (dimerisation) domain C3363_RS01335 PF02386 Cation transport protein C3363_RS01340 PF00209 Sodium:neurotransmitter symporter family C3363_RS01345 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C3363_RS01345 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C3363_RS01350 PF02254 TrkA-N domain C3363_RS01350 PF02080 TrkA-C domain C3363_RS01355 PF01189 16S rRNA methyltransferase RsmB/F C3363_RS01355 PF01029 NusB family C3363_RS01360 PF00551 Formyl transferase C3363_RS01360 PF02911 Formyl transferase, C-terminal domain C3363_RS01380 PF05970 PIF1-like helicase C3363_RS01380 PF14493 Helix-turn-helix domain C3363_RS01395 PF06250 YhcG PDDEXK nuclease domain C3363_RS01395 PF17761 DUF1016 N-terminal domain C3363_RS01410 PF16868 NMT1-like family C3363_RS01415 PF01205 Uncharacterized protein family UPF0029 C3363_RS01415 PF09186 Domain of unknown function (DUF1949) C3363_RS01420 PF01809 Putative membrane protein insertion efficiency factor C3363_RS01425 PF00825 Ribonuclease P C3363_RS01430 PF00468 Ribosomal protein L34 C3363_RS01435 PF06965 Na+/H+ antiporter 1 C3363_RS01440 PF02142 MGS-like domain C3363_RS01440 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C3363_RS01440 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C3363_RS01445 PF00117 Glutamine amidotransferase class-I C3363_RS01445 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C3363_RS01455 PF01699 Sodium/calcium exchanger protein C3363_RS01460 PF00012 Hsp70 protein C3363_RS01470 PF01556 DnaJ C terminal domain C3363_RS01470 PF00226 DnaJ domain C3363_RS01470 PF00684 DnaJ central domain C3363_RS01475 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase C3363_RS01480 PF00579 tRNA synthetases class I (W and Y) C3363_RS01490 PF04345 Chorismate lyase C3363_RS01495 PF01177 Asp/Glu/Hydantoin racemase C3363_RS01525 PF00474 Sodium:solute symporter family C3363_RS01530 PF00171 Aldehyde dehydrogenase family C3363_RS01530 PF01619 Proline dehydrogenase C3363_RS01530 PF14850 DNA-binding domain of Proline dehydrogenase C3363_RS01530 PF18327 Proline utilization A proline dehydrogenase N-terminal domain C3363_RS01540 PF00317 Ribonucleotide reductase, all-alpha domain C3363_RS01540 PF03477 ATP cone domain C3363_RS01540 PF02867 Ribonucleotide reductase, barrel domain C3363_RS01545 PF13416 Bacterial extracellular solute-binding protein C3363_RS01550 PF01184 GPR1/FUN34/yaaH family C3363_RS01555 PF01330 RuvA N terminal domain C3363_RS01555 PF07499 RuvA, C-terminal domain C3363_RS01560 PF17283 SprT-like zinc ribbon domain C3363_RS01560 PF10263 SprT-like family C3363_RS01565 PF00445 Ribonuclease T2 family C3363_RS01570 PF00291 Pyridoxal-phosphate dependent enzyme C3363_RS01575 PF03023 Lipid II flippase MurJ C3363_RS01580 PF01649 Ribosomal protein S20 C3363_RS01585 PF01119 DNA mismatch repair protein, C-terminal domain C3363_RS01585 PF08676 MutL C terminal dimerisation domain C3363_RS01590 PF01717 Cobalamin-independent synthase, Catalytic domain C3363_RS01590 PF08267 Cobalamin-independent synthase, N-terminal domain C3363_RS01595 PF02463 RecF/RecN/SMC N terminal domain C3363_RS01615 PF02976 DNA mismatch repair enzyme MutH C3363_RS01620 PF03741 Integral membrane protein TerC family C3363_RS01625 PF03788 LrgA family C3363_RS01630 PF00005 ABC transporter C3363_RS01635 PF05036 Sporulation related domain C3363_RS01645 PF03544 Gram-negative bacterial TonB protein C-terminal C3363_RS01650 PF02472 Biopolymer transport protein ExbD/TolR C3363_RS01655 PF01618 MotA/TolQ/ExbB proton channel family C3363_RS01660 PF00581 Rhodanese-like domain C3363_RS01665 PF01343 Peptidase family S49 C3363_RS01665 PF08496 Peptidase family S49 N-terminal C3363_RS01670 PF01207 Dihydrouridine synthase (Dus) C3363_RS01675 PF02954 Bacterial regulatory protein, Fis family C3363_RS01680 PF01209 ubiE/COQ5 methyltransferase family C3363_RS01690 PF03109 ABC1 family C3363_RS01700 PF09179 TilS substrate binding domain C3363_RS01700 PF11734 TilS substrate C-terminal domain C3363_RS01700 PF01171 PP-loop family C3363_RS01705 PF02580 D-Tyr-tRNA(Tyr) deacylase C3363_RS01710 PF03631 Virulence factor BrkB C3363_RS01720 PF02844 Phosphoribosylglycinamide synthetase, N domain C3363_RS01720 PF02843 Phosphoribosylglycinamide synthetase, C domain C3363_RS01720 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain C3363_RS01725 PF00171 Aldehyde dehydrogenase family C3363_RS01730 PF03797 Autotransporter beta-domain C3363_RS01730 PF13018 Extended Signal Peptide of Type V secretion system C3363_RS01730 PF02395 Immunoglobulin A1 protease C3363_RS01735 PF12848 ABC transporter C3363_RS01735 PF00005 ABC transporter C3363_RS01740 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C3363_RS01740 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3363_RS01750 PF04055 Radical SAM superfamily C3363_RS01755 PF01242 6-pyruvoyl tetrahydropterin synthase C3363_RS01760 PF06508 Queuosine biosynthesis protein QueC C3363_RS01765 PF02678 Pirin C3363_RS01765 PF05726 Pirin C-terminal cupin domain C3363_RS01770 PF00883 Cytosol aminopeptidase family, catalytic domain C3363_RS01770 PF12404 Peptidase C3363_RS01780 PF00902 Sec-independent protein translocase protein (TatC) C3363_RS01790 PF02416 mttA/Hcf106 family C3363_RS01795 PF02096 60Kd inner membrane protein C3363_RS01795 PF14849 YidC periplasmic domain C3363_RS01800 PF04445 Putative SAM-dependent methyltransferase C3363_RS01840 PF00588 SpoU rRNA Methylase family C3363_RS01845 PF10672 S-adenosylmethionine-dependent methyltransferase C3363_RS01845 PF02926 THUMP domain C3363_RS01845 PF01170 Putative RNA methylase family UPF0020 C3363_RS01850 PF05175 Methyltransferase small domain C3363_RS01850 PF08468 Methyltransferase small domain N-terminal C3363_RS01865 PF00583 Acetyltransferase (GNAT) family C3363_RS01880 PF00270 DEAD/DEAH box helicase C3363_RS01880 PF00271 Helicase conserved C-terminal domain C3363_RS01885 PF03550 Outer membrane lipoprotein LolB C3363_RS01890 PF08544 GHMP kinases C terminal C3363_RS01890 PF00288 GHMP kinases N terminal domain C3363_RS01895 PF14572 Phosphoribosyl synthetase-associated domain C3363_RS01895 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C3363_RS01900 PF01180 Dihydroorotate dehydrogenase C3363_RS01915 PF13545 Crp-like helix-turn-helix domain C3363_RS01915 PF00027 Cyclic nucleotide-binding domain C3363_RS01920 PF06794 Uncharacterised protein family (UPF0270) C3363_RS01925 PF00440 Bacterial regulatory proteins, tetR family C3363_RS01930 PF00692 dUTPase C3363_RS01940 PF04127 DNA / pantothenate metabolism flavoprotein C3363_RS01940 PF02441 Flavoprotein C3363_RS01945 PF04002 RadC-like JAB domain C3363_RS01950 PF00830 Ribosomal L28 family C3363_RS01955 PF00471 Ribosomal protein L33 C3363_RS01970 PF00072 Response regulator receiver domain C3363_RS01970 PF00486 Transcriptional regulatory protein, C terminal C3363_RS01975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3363_RS01975 PF00512 His Kinase A (phospho-acceptor) domain C3363_RS01975 PF08521 Two-component sensor kinase N-terminal C3363_RS01985 PF00166 Chaperonin 10 Kd subunit C3363_RS01990 PF00118 TCP-1/cpn60 chaperonin family C3363_RS01995 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain C3363_RS01995 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain C3363_RS02015 PF05662 Coiled stalk of trimeric autotransporter adhesin C3363_RS02015 PF13018 Extended Signal Peptide of Type V secretion system C3363_RS02015 PF03895 YadA-like membrane anchor domain C3363_RS02015 PF05658 Head domain of trimeric autotransporter adhesin C3363_RS02025 PF01521 Iron-sulphur cluster biosynthesis C3363_RS02030 PF01926 50S ribosome-binding GTPase C3363_RS02030 PF01018 GTP1/OBG C3363_RS02035 PF00892 EamA-like transporter family C3363_RS02040 PF00892 EamA-like transporter family C3363_RS02045 PF01016 Ribosomal L27 protein C3363_RS02050 PF00829 Ribosomal prokaryotic L21 protein C3363_RS02055 PF01979 Amidohydrolase family C3363_RS02060 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C3363_RS02065 PF01678 Diaminopimelate epimerase C3363_RS02070 PF03605 Anaerobic c4-dicarboxylate membrane transporter C3363_RS02075 PF00474 Sodium:solute symporter family C3363_RS02080 PF06196 Protein of unknown function (DUF997) C3363_RS02085 PF01340 Met Apo-repressor, MetJ C3363_RS02090 PF01544 CorA-like Mg2+ transporter protein C3363_RS02095 PF00270 DEAD/DEAH box helicase C3363_RS02095 PF00271 Helicase conserved C-terminal domain C3363_RS02095 PF02559 CarD-like/TRCF domain C3363_RS02095 PF03461 TRCF domain C3363_RS02095 PF17757 UvrB interaction domain C3363_RS02105 PF14821 Threonine synthase N terminus C3363_RS02105 PF00291 Pyridoxal-phosphate dependent enzyme C3363_RS02110 PF07690 Major Facilitator Superfamily C3363_RS02115 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C3363_RS02115 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C3363_RS02120 PF08534 Redoxin C3363_RS02125 PF01553 Acyltransferase C3363_RS02130 PF07731 Multicopper oxidase C3363_RS02130 PF07732 Multicopper oxidase C3363_RS02135 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit C3363_RS02140 PF08765 Mor transcription activator family C3363_RS02150 PF00367 phosphotransferase system, EIIB C3363_RS02150 PF02378 Phosphotransferase system, EIIC C3363_RS02150 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C3363_RS02170 PF13356 Arm DNA-binding domain C3363_RS02170 PF00589 Phage integrase family C3363_RS02180 PF00497 Bacterial extracellular solute-binding proteins, family 3 C3363_RS02185 PF00528 Binding-protein-dependent transport system inner membrane component C3363_RS02190 PF00005 ABC transporter C3363_RS02200 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C3363_RS02200 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3363_RS02205 PF04898 Glutamate synthase central domain C3363_RS02205 PF00310 Glutamine amidotransferases class-II C3363_RS02205 PF01493 GXGXG motif C3363_RS02205 PF01645 Conserved region in glutamate synthase C3363_RS02240 PF01042 Endoribonuclease L-PSP C3363_RS02245 PF01063 Amino-transferase class IV C3363_RS02250 PF03466 LysR substrate binding domain C3363_RS02250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3363_RS02255 PF13419 Haloacid dehalogenase-like hydrolase C3363_RS02260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3363_RS02260 PF03466 LysR substrate binding domain C3363_RS02270 PF00149 Calcineurin-like phosphoesterase C3363_RS02275 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C3363_RS02275 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C3363_RS02285 PF00145 C-5 cytosine-specific DNA methylase C3363_RS02290 PF04551 GcpE protein C3363_RS02295 PF13464 Domain of unknown function (DUF4115) C3363_RS02300 PF01343 Peptidase family S49 C3363_RS02305 PF00005 ABC transporter C3363_RS02305 PF00664 ABC transporter transmembrane region C3363_RS02310 PF04973 Nicotinamide mononucleotide transporter C3363_RS02315 PF00308 Bacterial dnaA protein C3363_RS02320 PF00005 ABC transporter C3363_RS02325 PF03379 CcmB protein C3363_RS02330 PF01578 Cytochrome C assembly protein C3363_RS02335 PF04995 Heme exporter protein D (CcmD) C3363_RS02340 PF00939 Sodium:sulfate symporter transmembrane region C3363_RS02345 PF00162 Phosphoglycerate kinase C3363_RS02350 PF01116 Fructose-bisphosphate aldolase class-II C3363_RS02355 PF00005 ABC transporter C3363_RS02360 PF00881 Nitroreductase family C3363_RS02365 PF03350 Uncharacterized protein family, UPF0114 C3363_RS02370 PF01266 FAD dependent oxidoreductase C3363_RS02390 PF03449 Transcription elongation factor, N-terminal C3363_RS02390 PF01272 Transcription elongation factor, GreA/GreB, C-term C3363_RS02395 PF00571 CBS domain C3363_RS02395 PF01380 SIS domain C3363_RS02410 PF04055 Radical SAM superfamily C3363_RS02415 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA C3363_RS02420 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system C3363_RS02445 PF00749 tRNA synthetases class I (E and Q), catalytic domain C3363_RS02465 PF00109 Beta-ketoacyl synthase, N-terminal domain C3363_RS02465 PF02801 Beta-ketoacyl synthase, C-terminal domain C3363_RS02470 PF04851 Type III restriction enzyme, res subunit C3363_RS02470 PF08774 VRR-NUC domain C3363_RS02475 PF01555 DNA methylase C3363_RS02475 PF18273 Type III R-M EcoP15I C-terminal domain C3363_RS02485 PF00709 Adenylosuccinate synthetase C3363_RS02490 PF01145 SPFH domain / Band 7 family C3363_RS02495 PF01145 SPFH domain / Band 7 family C3363_RS02500 PF00583 Acetyltransferase (GNAT) family C3363_RS02505 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C3363_RS02525 PF02321 Outer membrane efflux protein C3363_RS02530 PF00929 Exonuclease C3363_RS02535 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C3363_RS02545 PF11739 Dicarboxylate transport C3363_RS02575 PF00390 Malic enzyme, N-terminal domain C3363_RS02575 PF03949 Malic enzyme, NAD binding domain C3363_RS02575 PF01515 Phosphate acetyl/butaryl transferase C3363_RS02580 PF00462 Glutaredoxin C3363_RS02585 PF13538 UvrD-like helicase C-terminal domain C3363_RS02590 PF07715 TonB-dependent Receptor Plug Domain C3363_RS02590 PF00593 TonB dependent receptor C3363_RS02595 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB C3363_RS02595 PF08479 POTRA domain, ShlB-type C3363_RS02600 PF05860 haemagglutination activity domain C3363_RS02605 PF00224 Pyruvate kinase, barrel domain C3363_RS02605 PF02887 Pyruvate kinase, alpha/beta domain C3363_RS02610 PF00300 Histidine phosphatase superfamily (branch 1) C3363_RS02615 PF07690 Major Facilitator Superfamily C3363_RS02625 PF05231 MASE1 C3363_RS02625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3363_RS02625 PF07730 Histidine kinase C3363_RS02635 PF00365 Phosphofructokinase C3363_RS02640 PF00266 Aminotransferase class-V C3363_RS02645 PF00565 Staphylococcal nuclease homologue C3363_RS02650 PF03466 LysR substrate binding domain C3363_RS02650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3363_RS02655 PF00557 Metallopeptidase family M24 C3363_RS02660 PF01206 Sulfurtransferase TusA C3363_RS02665 PF13847 Methyltransferase domain C3363_RS02665 PF10119 Predicted methyltransferase regulatory domain C3363_RS02670 PF06877 Regulator of ribonuclease activity B C3363_RS02675 PF01926 50S ribosome-binding GTPase C3363_RS02685 PF01433 Peptidase family M1 domain C3363_RS02685 PF11940 Domain of unknown function (DUF3458) Ig-like fold C3363_RS02685 PF17432 Domain of unknown function (DUF3458_C) ARM repeats C3363_RS02690 PF01168 Alanine racemase, N-terminal domain C3363_RS02700 PF00929 Exonuclease C3363_RS02705 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE C3363_RS02710 PF01476 LysM domain C3363_RS02710 PF01520 N-acetylmuramoyl-L-alanine amidase C3363_RS02715 PF14256 YwiC-like protein C3363_RS02720 PF02698 DUF218 domain C3363_RS02725 PF02348 Cytidylyltransferase C3363_RS02740 PF00535 Glycosyl transferase family 2 C3363_RS02745 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal C3363_RS02745 PF01578 Cytochrome C assembly protein C3363_RS02750 PF03100 CcmE C3363_RS02755 PF02233 NAD(P) transhydrogenase beta subunit C3363_RS02760 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch C3363_RS02760 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C3363_RS02760 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C3363_RS02770 PF04085 rod shape-determining protein MreC C3363_RS02775 PF04093 rod shape-determining protein MreD C3363_RS02885 PF10124 Mu-like prophage major head subunit gpT C3363_RS02895 PF05069 Phage virion morphogenesis family C3363_RS02910 PF06074 Protein of unknown function (DUF935) C3363_RS02940 PF10841 Protein of unknown function (DUF2644) C3363_RS02950 PF01510 N-acetylmuramoyl-L-alanine amidase C3363_RS02980 PF07352 Bacteriophage Mu Gam like protein C3363_RS02995 PF13401 AAA domain C3363_RS02995 PF09077 Mu B transposition protein, C terminal C3363_RS03010 PF13693 Winged helix-turn-helix DNA-binding C3363_RS03015 PF01381 Helix-turn-helix C3363_RS03015 PF00717 Peptidase S24-like C3363_RS03035 PF01618 MotA/TolQ/ExbB proton channel family C3363_RS03040 PF02472 Biopolymer transport protein ExbD/TolR C3363_RS03050 PF07715 TonB-dependent Receptor Plug Domain C3363_RS03050 PF00593 TonB dependent receptor C3363_RS03055 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C3363_RS03065 PF03279 Bacterial lipid A biosynthesis acyltransferase C3363_RS03070 PF01725 Ham1 family C3363_RS03075 PF01906 Putative heavy-metal-binding C3363_RS03080 PF03692 Putative zinc- or iron-chelating domain C3363_RS03085 PF17757 UvrB interaction domain C3363_RS03085 PF12344 Ultra-violet resistance protein B C3363_RS03085 PF02151 UvrB/uvrC motif C3363_RS03085 PF04851 Type III restriction enzyme, res subunit C3363_RS03085 PF00271 Helicase conserved C-terminal domain C3363_RS03090 PF01966 HD domain C3363_RS03090 PF08335 GlnD PII-uridylyltransferase C3363_RS03095 PF12911 N-terminal TM domain of oligopeptide transport permease C C3363_RS03095 PF00528 Binding-protein-dependent transport system inner membrane component C3363_RS03100 PF00005 ABC transporter C3363_RS03100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C3363_RS03105 PF03952 Enolase, N-terminal domain C3363_RS03105 PF00113 Enolase, C-terminal TIM barrel domain C3363_RS03110 PF04461 Protein of unknown function (DUF520) C3363_RS03115 PF00986 DNA gyrase B subunit, carboxyl terminus C3363_RS03115 PF00204 DNA gyrase B C3363_RS03115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3363_RS03115 PF01751 Toprim domain C3363_RS03120 PF00199 Catalase C3363_RS03120 PF06628 Catalase-related immune-responsive C3363_RS03125 PF00149 Calcineurin-like phosphoesterase C3363_RS03130 PF06303 MatP N-terminal domain C3363_RS03130 PF17414 MatP C-terminal ribbon-helix-helix domain C3363_RS03135 PF05362 Lon protease (S16) C-terminal proteolytic domain C3363_RS03135 PF13654 AAA domain C3363_RS03140 PF07977 FabA-like domain C3363_RS03165 PF02929 Beta galactosidase small chain C3363_RS03165 PF02837 Glycosyl hydrolases family 2, sugar binding domain C3363_RS03165 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C3363_RS03165 PF00703 Glycosyl hydrolases family 2 C3363_RS03165 PF16353 Domain of unknown function(DUF4981) C3363_RS03170 PF01554 MatE C3363_RS03175 PF00849 RNA pseudouridylate synthase C3363_RS03185 PF00005 ABC transporter C3363_RS03190 PF00528 Binding-protein-dependent transport system inner membrane component C3363_RS03205 PF00293 NUDIX domain C3363_RS03210 PF01925 Sulfite exporter TauE/SafE C3363_RS03215 PF01790 Prolipoprotein diacylglyceryl transferase C3363_RS03220 PF01402 Ribbon-helix-helix protein, copG family C3363_RS03225 PF00258 Flavodoxin C3363_RS03230 PF01475 Ferric uptake regulator family C3363_RS03235 PF02470 MlaD protein C3363_RS03245 PF12762 ISXO2-like transposase domain C3363_RS03250 PF04352 ProQ/FINO family C3363_RS03255 PF00595 PDZ domain C3363_RS03255 PF17804 Tail specific protease N-terminal domain C3363_RS03255 PF03572 Peptidase family S41 C3363_RS03255 PF11818 C-terminal domain of tail specific protease (DUF3340) C3363_RS03260 PF03734 L,D-transpeptidase catalytic domain C3363_RS03265 PF05951 Bacterial protein of unknown function (DUF882) C3363_RS03270 PF00753 Metallo-beta-lactamase superfamily C3363_RS03275 PF04333 MlaA lipoprotein C3363_RS03280 PF00717 Peptidase S24-like C3363_RS03285 PF01053 Cys/Met metabolism PLP-dependent enzyme C3363_RS03290 PF05173 Dihydrodipicolinate reductase, C-terminus C3363_RS03290 PF01113 Dihydrodipicolinate reductase, N-terminus C3363_RS03295 PF02219 Methylenetetrahydrofolate reductase C3363_RS03300 PF00180 Isocitrate/isopropylmalate dehydrogenase C3363_RS03305 PF06434 Aconitate hydratase 2 N-terminus C3363_RS03305 PF11791 Aconitate B N-terminal domain C3363_RS03305 PF00330 Aconitase family (aconitate hydratase) C3363_RS03310 PF00285 Citrate synthase, C-terminal domain C3363_RS03315 PF05191 Adenylate kinase, active site lid C3363_RS03320 PF00209 Sodium:neurotransmitter symporter family C3363_RS03325 PF02086 D12 class N6 adenine-specific DNA methyltransferase C3363_RS03330 PF01761 3-dehydroquinate synthase C3363_RS03335 PF01202 Shikimate kinase C3363_RS03340 PF17092 Penicillin-binding protein OB-like domain C3363_RS03340 PF00905 Penicillin binding protein transpeptidase domain C3363_RS03340 PF00912 Transglycosylase C3363_RS03365 PF00263 Bacterial type II and III secretion system protein C3363_RS03365 PF03958 Bacterial type II/III secretion system short domain C3363_RS03370 PF01029 NusB family C3363_RS03375 PF00586 AIR synthase related protein, N-terminal domain C3363_RS03375 PF02769 AIR synthase related protein, C-terminal domain C3363_RS03380 PF04608 Phosphatidylglycerophosphatase A C3363_RS03385 PF01810 LysE type translocator C3363_RS03390 PF00085 Thioredoxin C3363_RS03400 PF03061 Thioesterase superfamily C3363_RS03405 PF13183 4Fe-4S dicluster domain C3363_RS03405 PF02913 FAD linked oxidases, C-terminal domain C3363_RS03405 PF01565 FAD binding domain C3363_RS03410 PF00691 OmpA family C3363_RS03410 PF01389 OmpA-like transmembrane domain C3363_RS03415 PF01641 SelR domain C3363_RS03420 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C3363_RS03420 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C3363_RS03425 PF00589 Phage integrase family C3363_RS03425 PF02899 Phage integrase, N-terminal SAM-like domain C3363_RS03430 PF00521 DNA gyrase/topoisomerase IV, subunit A C3363_RS03430 PF03989 DNA gyrase C-terminal domain, beta-propeller C3363_RS03470 PF03895 YadA-like membrane anchor domain C3363_RS03470 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin C3363_RS03470 PF05662 Coiled stalk of trimeric autotransporter adhesin C3363_RS03470 PF13018 Extended Signal Peptide of Type V secretion system C3363_RS03480 PF02910 Fumarate reductase flavoprotein C-term C3363_RS03480 PF00890 FAD binding domain C3363_RS03485 PF13183 4Fe-4S dicluster domain C3363_RS03485 PF13085 2Fe-2S iron-sulfur cluster binding domain C3363_RS03490 PF02300 Fumarate reductase subunit C C3363_RS03495 PF02313 Fumarate reductase subunit D C3363_RS03510 PF04354 ZipA, C-terminal FtsZ-binding domain C3363_RS03515 PF00533 BRCA1 C Terminus (BRCT) domain C3363_RS03515 PF01653 NAD-dependent DNA ligase adenylation domain C3363_RS03515 PF12826 Helix-hairpin-helix motif C3363_RS03515 PF03119 NAD-dependent DNA ligase C4 zinc finger domain C3363_RS03515 PF03120 NAD-dependent DNA ligase OB-fold domain C3363_RS03520 PF00270 DEAD/DEAH box helicase C3363_RS03520 PF00271 Helicase conserved C-terminal domain C3363_RS03520 PF00570 HRDC domain C3363_RS03520 PF16124 RecQ zinc-binding C3363_RS03520 PF09382 RQC domain C3363_RS03525 PF01491 Frataxin-like domain C3363_RS03530 PF01726 LexA DNA binding domain C3363_RS03530 PF00717 Peptidase S24-like C3363_RS03535 PF07681 DoxX C3363_RS03545 PF05114 Protein of unknown function (DUF692) C3363_RS03550 PF09836 Putative DNA-binding domain C3363_RS03555 PF08281 Sigma-70, region 4 C3363_RS03555 PF04542 Sigma-70 region 2 C3363_RS03565 PF01553 Acyltransferase C3363_RS03570 PF00156 Phosphoribosyl transferase domain C3363_RS03575 PF12170 DNA polymerase III tau subunit V interacting with alpha C3363_RS03575 PF12169 DNA polymerase III subunits gamma and tau domain III C3363_RS03580 PF00005 ABC transporter C3363_RS03585 PF01061 ABC-2 type transporter C3363_RS03595 PF05016 ParE toxin of type II toxin-antitoxin system, parDE C3363_RS03600 PF08411 Exonuclease C-terminal C3363_RS03600 PF00929 Exonuclease C3363_RS03605 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase C3363_RS03610 PF02811 PHP domain C3363_RS03615 PF10369 Small subunit of acetolactate synthase C3363_RS03620 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C3363_RS03620 PF00205 Thiamine pyrophosphate enzyme, central domain C3363_RS03620 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C3363_RS03625 PF00180 Isocitrate/isopropylmalate dehydrogenase C3363_RS03630 PF00873 AcrB/AcrD/AcrF family C3363_RS03635 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C3363_RS03645 PF01808 AICARFT/IMPCHase bienzyme C3363_RS03645 PF02142 MGS-like domain C3363_RS03650 PF01053 Cys/Met metabolism PLP-dependent enzyme C3363_RS03655 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C3363_RS03655 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C3363_RS03660 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) C3363_RS03670 PF04175 Protein of unknown function (DUF406) C3363_RS03680 PF02348 Cytidylyltransferase C3363_RS03685 PF01943 Polysaccharide biosynthesis protein C3363_RS03700 PF00534 Glycosyl transferases group 1 C3363_RS03700 PF13439 Glycosyltransferase Family 4 C3363_RS03705 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) C3363_RS03710 PF00535 Glycosyl transferase family 2 C3363_RS03715 PF02397 Bacterial sugar transferase C3363_RS03720 PF18412 Outer-membrane lipoprotein Wza C-terminal domain C3363_RS03720 PF10531 SLBB domain C3363_RS03720 PF02563 Polysaccharide biosynthesis/export protein C3363_RS03725 PF01451 Low molecular weight phosphotyrosine protein phosphatase C3363_RS03730 PF13614 AAA domain C3363_RS03730 PF13807 G-rich domain on putative tyrosine kinase C3363_RS03730 PF02706 Chain length determinant protein C3363_RS03735 PF02082 Transcriptional regulator C3363_RS03740 PF00266 Aminotransferase class-V C3363_RS03745 PF01592 NifU-like N terminal domain C3363_RS03750 PF01521 Iron-sulphur cluster biosynthesis C3363_RS03755 PF07743 HSCB C-terminal oligomerisation domain C3363_RS03760 PF10946 Protein of unknown function DUF2625 C3363_RS03765 PF00012 Hsp70 protein C3363_RS03770 PF00111 2Fe-2S iron-sulfur cluster binding domain C3363_RS03775 PF04384 Iron-sulphur cluster assembly C3363_RS03780 PF00005 ABC transporter C3363_RS03780 PF00664 ABC transporter transmembrane region C3363_RS03785 PF02664 S-Ribosylhomocysteinase (LuxS) C3363_RS03795 PF00462 Glutaredoxin C3363_RS03800 PF17274 Family of unknown function (DUF5339) C3363_RS03805 PF01654 Cytochrome bd terminal oxidase subunit I C3363_RS03810 PF02322 Cytochrome bd terminal oxidase subunit II C3363_RS03825 PF03061 Thioesterase superfamily C3363_RS03830 PF01618 MotA/TolQ/ExbB proton channel family C3363_RS03835 PF02472 Biopolymer transport protein ExbD/TolR C3363_RS03840 PF06519 TolA C-terminal C3363_RS03845 PF04052 TolB amino-terminal domain C3363_RS03845 PF07676 WD40-like Beta Propeller Repeat C3363_RS03850 PF00691 OmpA family C3363_RS03855 PF00226 DnaJ domain C3363_RS03855 PF05099 Tellurite resistance protein TerB C3363_RS03860 PF09997 Predicted membrane protein (DUF2238) C3363_RS03865 PF01207 Dihydrouridine synthase (Dus) C3363_RS03870 PF05128 Domain of unknown function (DUF697) C3363_RS03875 PF01416 tRNA pseudouridine synthase C3363_RS03880 PF10150 Ribonuclease E/G family C3363_RS03880 PF00575 S1 RNA binding domain C3363_RS03885 PF13416 Bacterial extracellular solute-binding protein C3363_RS03895 PF03968 OstA-like protein C3363_RS03900 PF12399 Branched-chain amino acid ATP-binding cassette transporter C3363_RS03900 PF00005 ABC transporter C3363_RS03905 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C3363_RS03910 PF03668 P-loop ATPase protein family C3363_RS03915 PF01494 FAD binding domain C3363_RS03925 PF09190 DALR domain C3363_RS03925 PF01406 tRNA synthetases class I (C) catalytic domain C3363_RS03935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3363_RS03940 PF03313 Serine dehydratase alpha chain C3363_RS03940 PF03315 Serine dehydratase beta chain C3363_RS03940 PF03313 Serine dehydratase alpha chain C3363_RS03940 PF03315 Serine dehydratase beta chain C3363_RS03950 PF00005 ABC transporter C3363_RS03955 PF01497 Periplasmic binding protein C3363_RS03960 PF01032 FecCD transport family C3363_RS03965 PF07715 TonB-dependent Receptor Plug Domain C3363_RS03965 PF00593 TonB dependent receptor C3363_RS03970 PF00343 Carbohydrate phosphorylase C3363_RS03980 PF02600 Disulfide bond formation protein DsbB C3363_RS03985 PF06450 Bacterial Na+/H+ antiporter B (NhaB) C3363_RS03990 PF07840 FadR C-terminal domain C3363_RS03990 PF00392 Bacterial regulatory proteins, gntR family C3363_RS03995 PF02424 ApbE family C3363_RS04000 PF04400 (Na+)-NQR maturation NqrM C3363_RS04020 PF02780 Transketolase, C-terminal domain C3363_RS04020 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C3363_RS04020 PF02779 Transketolase, pyrimidine binding domain C3363_RS04025 PF00459 Inositol monophosphatase family C3363_RS04035 PF02381 MraZ protein, putative antitoxin-like C3363_RS04040 PF01795 MraW methylase family C3363_RS04045 PF04999 Cell division protein FtsL C3363_RS04050 PF00905 Penicillin binding protein transpeptidase domain C3363_RS04050 PF03717 Penicillin-binding Protein dimerisation domain C3363_RS04055 PF01225 Mur ligase family, catalytic domain C3363_RS04055 PF08245 Mur ligase middle domain C3363_RS04055 PF02875 Mur ligase family, glutamate ligase domain C3363_RS04060 PF08245 Mur ligase middle domain C3363_RS04060 PF02875 Mur ligase family, glutamate ligase domain C3363_RS04060 PF01225 Mur ligase family, catalytic domain C3363_RS04065 PF00953 Glycosyl transferase family 4 C3363_RS04065 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 C3363_RS04070 PF02875 Mur ligase family, glutamate ligase domain C3363_RS04070 PF08245 Mur ligase middle domain C3363_RS04075 PF01098 Cell cycle protein C3363_RS04080 PF03033 Glycosyltransferase family 28 N-terminal domain C3363_RS04080 PF04101 Glycosyltransferase family 28 C-terminal domain C3363_RS04090 PF01225 Mur ligase family, catalytic domain C3363_RS04090 PF02875 Mur ligase family, glutamate ligase domain C3363_RS04090 PF08245 Mur ligase middle domain C3363_RS04095 PF07478 D-ala D-ala ligase C-terminus C3363_RS04095 PF01820 D-ala D-ala ligase N-terminus C3363_RS04100 PF08478 POTRA domain, FtsQ-type C3363_RS04100 PF03799 Cell division protein FtsQ C3363_RS04105 PF02491 SHS2 domain inserted in FTSA C3363_RS04110 PF12327 FtsZ family, C-terminal domain C3363_RS04110 PF00091 Tubulin/FtsZ family, GTPase domain C3363_RS04115 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase C3363_RS04120 PF00375 Sodium:dicarboxylate symporter family C3363_RS04125 PF00679 Elongation factor G C-terminus C3363_RS04125 PF00009 Elongation factor Tu GTP binding domain C3363_RS04125 PF03144 Elongation factor Tu domain 2 C3363_RS04125 PF06421 GTP-binding protein LepA C-terminus C3363_RS04130 PF10502 Signal peptidase, peptidase S26 C3363_RS04135 PF14622 Ribonuclease-III-like C3363_RS04135 PF00035 Double-stranded RNA binding motif C3363_RS04140 PF01926 50S ribosome-binding GTPase C3363_RS04140 PF07650 KH domain C3363_RS04145 PF02565 Recombination protein O C terminal C3363_RS04145 PF11967 Recombination protein O N terminal C3363_RS04155 PF00561 alpha/beta hydrolase fold C3363_RS04165 PF00696 Amino acid kinase family C3363_RS04170 PF13580 SIS domain C3363_RS04175 PF01765 Ribosome recycling factor C3363_RS04180 PF18381 YcaO cyclodehydratase C-terminal domain C3363_RS04180 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding C3363_RS04185 PF00860 Permease family C3363_RS04190 PF01594 AI-2E family transporter C3363_RS04200 PF04186 FxsA cytoplasmic membrane protein C3363_RS04205 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C3363_RS04205 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C3363_RS04205 PF00205 Thiamine pyrophosphate enzyme, central domain C3363_RS04220 PF00082 Subtilase family C3363_RS04220 PF03797 Autotransporter beta-domain C3363_RS04230 PF01588 Putative tRNA binding domain C3363_RS04230 PF09334 tRNA synthetases class I (M) C3363_RS04235 PF00334 Nucleoside diphosphate kinase C3363_RS04250 PF00293 NUDIX domain C3363_RS04260 PF01226 Formate/nitrite transporter C3363_RS04265 PF02901 Pyruvate formate lyase-like C3363_RS04265 PF01228 Glycine radical C3363_RS04270 PF04055 Radical SAM superfamily C3363_RS04275 PF16036 Chalcone isomerase-like C3363_RS04280 PF06826 Predicted Permease Membrane Region C3363_RS04280 PF02080 TrkA-C domain C3363_RS04285 PF03616 Sodium/glutamate symporter C3363_RS04295 PF06295 Protein of unknown function (DUF1043) C3363_RS04300 PF00572 Ribosomal protein L13 C3363_RS04305 PF00380 Ribosomal protein S9/S16 C3363_RS04315 PF13609 Gram-negative porin C3363_RS04320 PF00588 SpoU rRNA Methylase family C3363_RS04330 PF00027 Cyclic nucleotide-binding domain C3363_RS04330 PF00325 Bacterial regulatory proteins, crp family C3363_RS04335 PF13649 Methyltransferase domain C3363_RS04340 PF00772 DnaB-like helicase N terminal domain C3363_RS04340 PF03796 DnaB-like helicase C terminal domain C3363_RS04345 PF05166 YcgL domain C3363_RS04350 PF03477 ATP cone domain C3363_RS04355 PF04055 Radical SAM superfamily C3363_RS04365 PF01132 Elongation factor P (EF-P) OB domain C3363_RS04365 PF08207 Elongation factor P (EF-P) KOW-like domain C3363_RS04365 PF09285 Elongation factor P, C-terminal C3363_RS04375 PF06005 Cell division protein ZapB C3363_RS04380 PF00265 Thymidine kinase C3363_RS04385 PF13419 Haloacid dehalogenase-like hydrolase C3363_RS04390 PF01367 5'-3' exonuclease, C-terminal SAM fold C3363_RS04390 PF00476 DNA polymerase family A C3363_RS04390 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C3363_RS04390 PF01612 3'-5' exonuclease C3363_RS04395 PF01027 Inhibitor of apoptosis-promoting Bax1 C3363_RS04400 PF10431 C-terminal, D2-small domain, of ClpB protein C3363_RS04400 PF00004 ATPase family associated with various cellular activities (AAA) C3363_RS04400 PF07724 AAA domain (Cdc48 subfamily) C3363_RS04400 PF02861 Clp amino terminal domain, pathogenicity island component C3363_RS04400 PF17871 AAA lid domain C3363_RS04405 PF13098 Thioredoxin-like domain C3363_RS04405 PF10411 Disulfide bond isomerase protein N-terminus C3363_RS04410 PF04225 Opacity-associated protein A LysM-like domain C3363_RS04410 PF01551 Peptidase family M23 C3363_RS04415 PF00005 ABC transporter C3363_RS04420 PF00950 ABC 3 transport family C3363_RS04425 PF13230 Glutamine amidotransferases class-II C3363_RS04430 PF01791 DeoC/LacD family aldolase C3363_RS04440 PF01301 Glycosyl hydrolases family 35 C3363_RS04445 PF03613 PTS system mannose/fructose/sorbose family IID component C3363_RS04450 PF03609 PTS system sorbose-specific iic component C3363_RS04455 PF03830 PTS system sorbose subfamily IIB component C3363_RS04460 PF01380 SIS domain C3363_RS04465 PF08220 DeoR-like helix-turn-helix domain C3363_RS04465 PF00455 DeoR C terminal sensor domain C3363_RS04470 PF04381 Putative exonuclease, RdgC C3363_RS04475 PF00528 Binding-protein-dependent transport system inner membrane component C3363_RS04480 PF08402 TOBE domain C3363_RS04480 PF00005 ABC transporter C3363_RS04490 PF02576 RimP N-terminal domain C3363_RS04490 PF17384 RimP C-terminal SH3 domain C3363_RS04495 PF13184 NusA-like KH domain C3363_RS04495 PF08529 NusA N-terminal domain C3363_RS04495 PF00575 S1 RNA binding domain C3363_RS04500 PF04760 Translation initiation factor IF-2, N-terminal region C3363_RS04500 PF00009 Elongation factor Tu GTP binding domain C3363_RS04500 PF11987 Translation-initiation factor 2 C3363_RS04520 PF05658 Head domain of trimeric autotransporter adhesin C3363_RS04520 PF13018 Extended Signal Peptide of Type V secretion system C3363_RS04520 PF03895 YadA-like membrane anchor domain C3363_RS04520 PF05662 Coiled stalk of trimeric autotransporter adhesin C3363_RS04525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3363_RS04525 PF03466 LysR substrate binding domain C3363_RS04530 PF01396 Topoisomerase DNA binding C4 zinc finger C3363_RS04530 PF01751 Toprim domain C3363_RS04530 PF08272 Topoisomerase I zinc-ribbon-like C3363_RS04530 PF01131 DNA topoisomerase C3363_RS04535 PF11893 Domain of unknown function (DUF3413) C3363_RS04535 PF00884 Sulfatase C3363_RS04540 PF07208 Protein of unknown function (DUF1414) C3363_RS04550 PF01227 GTP cyclohydrolase I C3363_RS04555 PF02568 Thiamine biosynthesis protein (ThiI) C3363_RS04555 PF02926 THUMP domain C3363_RS04560 PF12804 MobA-like NTP transferase domain C3363_RS04560 PF00132 Bacterial transferase hexapeptide (six repeats) C3363_RS04565 PF17188 MucB/RseB C-terminal domain C3363_RS04565 PF03888 MucB/RseB N-terminal domain C3363_RS04575 PF00501 AMP-binding enzyme C3363_RS04575 PF13193 AMP-binding enzyme C-terminal domain C3363_RS04580 PF01551 Peptidase family M23 C3363_RS04585 PF04748 Divergent polysaccharide deacetylase C3363_RS04590 PF17243 POTRA domain TamA domain 1 C3363_RS04590 PF01103 Surface antigen C3363_RS04595 PF04357 TamB, inner membrane protein subunit of TAM complex C3363_RS04605 PF00664 ABC transporter transmembrane region C3363_RS04605 PF00005 ABC transporter C3363_RS04610 PF00005 ABC transporter C3363_RS04610 PF00664 ABC transporter transmembrane region C3363_RS04615 PF00293 NUDIX domain C3363_RS04620 PF07517 SecA DEAD-like domain C3363_RS04620 PF01043 SecA preprotein cross-linking domain C3363_RS04620 PF07516 SecA Wing and Scaffold domain C3363_RS04620 PF02810 SEC-C motif C3363_RS04640 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C3363_RS04645 PF12627 Probable RNA and SrmB- binding site of polymerase A C3363_RS04645 PF12626 Polymerase A arginine-rich C-terminus C3363_RS04645 PF01743 Poly A polymerase head domain C3363_RS04650 PF01258 Prokaryotic dksA/traR C4-type zinc finger C3363_RS04655 PF02446 4-alpha-glucanotransferase C3363_RS04660 PF00528 Binding-protein-dependent transport system inner membrane component C3363_RS04670 PF00528 Binding-protein-dependent transport system inner membrane component C3363_RS04670 PF14785 Maltose transport system permease protein MalF P2 domain C3363_RS04675 PF01547 Bacterial extracellular solute-binding protein C3363_RS04680 PF00005 ABC transporter C3363_RS04680 PF17912 MalK OB fold domain C3363_RS04685 PF04055 Radical SAM superfamily C3363_RS04685 PF06969 HemN C-terminal domain C3363_RS04695 PF03548 Outer membrane lipoprotein carrier protein LolA C3363_RS04700 PF01371 Trp repressor protein C3363_RS04705 PF00912 Transglycosylase C3363_RS04710 PF00528 Binding-protein-dependent transport system inner membrane component C3363_RS04720 PF00005 ABC transporter C3363_RS04725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3363_RS04725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3363_RS04725 PF02770 Acyl-CoA dehydrogenase, middle domain C3363_RS04735 PF08443 RimK-like ATP-grasp domain C3363_RS04735 PF18030 RimK PreATP-grasp domain C3363_RS04740 PF17192 MukF middle domain C3363_RS04740 PF03882 MukF winged-helix domain C3363_RS04740 PF17193 MukF C-terminal domain C3363_RS04745 PF04288 MukE-like family C3363_RS04750 PF00145 C-5 cytosine-specific DNA methylase C3363_RS04760 PF04310 MukB N-terminal C3363_RS04760 PF16330 MukB hinge domain C3363_RS04765 PF12627 Probable RNA and SrmB- binding site of polymerase A C3363_RS04765 PF01743 Poly A polymerase head domain C3363_RS04765 PF01966 HD domain C3363_RS04770 PF00881 Nitroreductase family C3363_RS04775 PF04175 Protein of unknown function (DUF406) C3363_RS04790 PF03372 Endonuclease/Exonuclease/phosphatase family C3363_RS04800 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain C3363_RS04800 PF00749 tRNA synthetases class I (E and Q), catalytic domain C3363_RS04805 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded C3363_RS04810 PF17768 RecJ OB domain C3363_RS04810 PF02272 DHHA1 domain C3363_RS04810 PF01368 DHH family C3363_RS04815 PF01389 OmpA-like transmembrane domain C3363_RS04815 PF00691 OmpA family C3363_RS04830 PF00701 Dihydrodipicolinate synthetase family C3363_RS04835 PF00152 tRNA synthetases class II (D, K and N) C3363_RS04835 PF01336 OB-fold nucleic acid binding domain C3363_RS04840 PF03883 Peroxide stress protein YaaA C3363_RS04845 PF00318 Ribosomal protein S2 C3363_RS04850 PF00889 Elongation factor TS C3363_RS04855 PF02634 FdhD/NarQ family C3363_RS04870 PF09163 Formate dehydrogenase N, transmembrane C3363_RS04870 PF13247 4Fe-4S dicluster domain C3363_RS04875 PF01292 Prokaryotic cytochrome b561 C3363_RS04890 PF00128 Alpha amylase, catalytic domain C3363_RS04890 PF02806 Alpha amylase, C-terminal all-beta domain C3363_RS04890 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C3363_RS04895 PF18390 Glycogen debranching enzyme C-terminal domain C3363_RS04895 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C3363_RS04895 PF00128 Alpha amylase, catalytic domain C3363_RS04900 PF00483 Nucleotidyl transferase C3363_RS04905 PF08323 Starch synthase catalytic domain C3363_RS04905 PF00534 Glycosyl transferases group 1 C3363_RS04910 PF00478 IMP dehydrogenase / GMP reductase domain C3363_RS04910 PF00571 CBS domain C3363_RS04915 PF08942 Domain of unknown function (DUF1919) C3363_RS04925 PF02540 NAD synthase C3363_RS04925 PF00958 GMP synthase C terminal domain C3363_RS04925 PF00117 Glutamine amidotransferase class-I C3363_RS04975 PF13099 Domain of unknown function (DUF3944) C3363_RS04975 PF03981 Ubiquinol-cytochrome C chaperone C3363_RS05000 PF03372 Endonuclease/Exonuclease/phosphatase family C3363_RS05005 PF03553 Na+/H+ antiporter family C3363_RS05005 PF13726 Na+-H+ antiporter family C3363_RS05010 PF01171 PP-loop family C3363_RS05015 PF02441 Flavoprotein C3363_RS05025 PF08335 GlnD PII-uridylyltransferase C3363_RS05025 PF03710 Glutamate-ammonia ligase adenylyltransferase C3363_RS05030 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term C3363_RS05030 PF14489 QueF-like protein C3363_RS05035 PF01037 Lrp/AsnC ligand binding domain C3363_RS05040 PF09397 Ftsk gamma domain C3363_RS05040 PF13491 4TM region of DNA translocase FtsK/SpoIIIE C3363_RS05040 PF17854 FtsK alpha domain C3363_RS05040 PF01580 FtsK/SpoIIIE family C3363_RS05045 PF00793 DAHP synthetase I family C3363_RS05050 PF00814 Glycoprotease family C3363_RS05065 PF03372 Endonuclease/Exonuclease/phosphatase family C3363_RS05070 PF03498 Cytolethal distending toxin A/C domain C3363_RS05075 PF01702 Queuine tRNA-ribosyltransferase C3363_RS05080 PF01751 Toprim domain C3363_RS05080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3363_RS05080 PF00986 DNA gyrase B subunit, carboxyl terminus C3363_RS05080 PF00204 DNA gyrase B C3363_RS05080 PF18053 DNA gyrase B subunit insert domain C3363_RS05085 PF01814 Hemerythrin HHE cation binding domain C3363_RS05090 PF01206 Sulfurtransferase TusA C3363_RS05100 PF04751 Protein of unknown function (DUF615) C3363_RS05105 PF01523 Putative modulator of DNA gyrase C3363_RS05115 PF00694 Aconitase C-terminal domain C3363_RS05120 PF00330 Aconitase family (aconitate hydratase) C3363_RS05125 PF07690 Major Facilitator Superfamily C3363_RS05130 PF00849 RNA pseudouridylate synthase C3363_RS05130 PF01479 S4 domain C3363_RS05135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3363_RS05135 PF16527 Two-component sensor protein CpxA, periplasmic domain C3363_RS05135 PF00672 HAMP domain C3363_RS05135 PF00512 His Kinase A (phospho-acceptor) domain C3363_RS05140 PF00072 Response regulator receiver domain C3363_RS05140 PF00486 Transcriptional regulatory protein, C terminal C3363_RS05145 PF03819 MazG nucleotide pyrophosphohydrolase domain C3363_RS05150 PF00557 Metallopeptidase family M24 C3363_RS05150 PF05195 Aminopeptidase P, N-terminal domain C3363_RS05165 PF00266 Aminotransferase class-V C3363_RS05170 PF02384 N-6 DNA Methylase C3363_RS05175 PF01420 Type I restriction modification DNA specificity domain C3363_RS05180 PF18766 SWI2/SNF2 ATPase C3363_RS05180 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) C3363_RS05180 PF11867 Domain of unknown function (DUF3387) C3363_RS05185 PF00155 Aminotransferase class I and II C3363_RS05195 PF00849 RNA pseudouridylate synthase C3363_RS05200 PF01336 OB-fold nucleic acid binding domain C3363_RS05200 PF00152 tRNA synthetases class II (D, K and N) C3363_RS05205 PF00593 TonB dependent receptor C3363_RS05205 PF07715 TonB-dependent Receptor Plug Domain C3363_RS05210 PF02541 Ppx/GppA phosphatase family C3363_RS05215 PF00311 Phosphoenolpyruvate carboxylase C3363_RS05220 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C3363_RS05225 PF00313 'Cold-shock' DNA-binding domain C3363_RS05230 PF00578 AhpC/TSA family C3363_RS05240 PF00156 Phosphoribosyl transferase domain C3363_RS05245 PF14718 Soluble lytic murein transglycosylase L domain C3363_RS05245 PF01464 Transglycosylase SLT domain C3363_RS05250 PF00665 Integrase core domain C3363_RS05250 PF13936 Helix-turn-helix domain C3363_RS05260 PF16916 Dimerisation domain of Zinc Transporter C3363_RS05260 PF01545 Cation efflux family C3363_RS05265 PF13378 Enolase C-terminal domain-like C3363_RS05285 PF03895 YadA-like membrane anchor domain C3363_RS05285 PF13018 Extended Signal Peptide of Type V secretion system C3363_RS05285 PF05658 Head domain of trimeric autotransporter adhesin C3363_RS05285 PF05662 Coiled stalk of trimeric autotransporter adhesin C3363_RS05295 PF06062 Uncharacterised protein family (UPF0231) C3363_RS05300 PF17760 UvrA interaction domain C3363_RS05300 PF17755 UvrA DNA-binding domain C3363_RS05305 PF00436 Single-strand binding protein family C3363_RS05310 PF13173 AAA domain C3363_RS05310 PF13635 Domain of unknown function (DUF4143) C3363_RS05320 PF00270 DEAD/DEAH box helicase C3363_RS05320 PF00271 Helicase conserved C-terminal domain C3363_RS05325 PF01381 Helix-turn-helix C3363_RS05335 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C3363_RS05335 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C3363_RS05340 PF00464 Serine hydroxymethyltransferase C3363_RS05345 PF13742 OB-fold nucleic acid binding domain C3363_RS05345 PF02601 Exonuclease VII, large subunit C3363_RS05350 PF03989 DNA gyrase C-terminal domain, beta-propeller C3363_RS05350 PF00521 DNA gyrase/topoisomerase IV, subunit A C3363_RS05360 PF00561 alpha/beta hydrolase fold C3363_RS05365 PF03925 SeqA protein C-terminal domain C3363_RS05365 PF17206 SeqA protein N-terminal domain C3363_RS05370 PF00501 AMP-binding enzyme C3363_RS05375 PF12794 Mechanosensitive ion channel inner membrane domain 1 C3363_RS05375 PF12795 Mechanosensitive ion channel porin domain C3363_RS05375 PF00924 Mechanosensitive ion channel C3363_RS05380 PF01264 Chorismate synthase C3363_RS05385 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB C3363_RS05395 PF00480 ROK family C3363_RS05395 PF01047 MarR family C3363_RS05400 PF01612 3'-5' exonuclease C3363_RS05400 PF00570 HRDC domain C3363_RS05485 PF00872 Transposase, Mutator family C3363_RS05510 PF00871 Acetokinase family C3363_RS05515 PF07085 DRTGG domain C3363_RS05515 PF01515 Phosphate acetyl/butaryl transferase C3363_RS05525 PF04386 Stringent starvation protein B C3363_RS05530 PF00043 Glutathione S-transferase, C-terminal domain C3363_RS05530 PF02798 Glutathione S-transferase, N-terminal domain C3363_RS05535 PF04363 Protein of unknown function (DUF496) C3363_RS05540 PF08245 Mur ligase middle domain C3363_RS05545 PF01039 Carboxyl transferase domain C3363_RS05545 PF17848 Acetyl-coA carboxylase zinc finger domain C3363_RS05560 PF00155 Aminotransferase class I and II C3363_RS05565 PF00892 EamA-like transporter family C3363_RS05575 PF00701 Dihydrodipicolinate synthetase family C3363_RS05580 PF01380 SIS domain C3363_RS05580 PF01418 Helix-turn-helix domain, rpiR family C3363_RS05585 PF04074 YhcH/YjgK/YiaL C3363_RS05660 PF04233 Phage Mu protein F like protein C3363_RS05680 PF00589 Phage integrase family C3363_RS05680 PF13356 Arm DNA-binding domain C3363_RS05690 PF03840 Preprotein translocase SecG subunit C3363_RS05695 PF01751 Toprim domain C3363_RS05695 PF01131 DNA topoisomerase C3363_RS05700 PF03411 Penicillin-insensitive murein endopeptidase C3363_RS05710 PF04241 Protein of unknown function (DUF423) C3363_RS05730 PF04055 Radical SAM superfamily C3363_RS05730 PF06463 Molybdenum Cofactor Synthesis C C3363_RS05740 PF01967 MoaC family C3363_RS05745 PF02597 ThiS family C3363_RS05750 PF02391 MoaE protein C3363_RS05755 PF02130 Uncharacterized protein family UPF0054 C3363_RS05760 PF17176 tRNA-binding domain C3363_RS05760 PF05127 Helicase C3363_RS05760 PF13718 GNAT acetyltransferase 2 C3363_RS05765 PF13407 Periplasmic binding protein domain C3363_RS05770 PF00005 ABC transporter C3363_RS05775 PF02653 Branched-chain amino acid transport system / permease component C3363_RS05780 PF03180 NLPA lipoprotein C3363_RS05785 PF03180 NLPA lipoprotein C3363_RS05790 PF00528 Binding-protein-dependent transport system inner membrane component C3363_RS05795 PF00005 ABC transporter C3363_RS05795 PF09383 NIL domain C3363_RS05800 PF01914 MarC family integral membrane protein C3363_RS05805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3363_RS05810 PF10609 NUBPL iron-transfer P-loop NTPase C3363_RS05815 PF05658 Head domain of trimeric autotransporter adhesin C3363_RS05815 PF13018 Extended Signal Peptide of Type V secretion system C3363_RS05815 PF03895 YadA-like membrane anchor domain C3363_RS05815 PF05658 Head domain of trimeric autotransporter adhesin C3363_RS05815 PF03895 YadA-like membrane anchor domain C3363_RS05815 PF05662 Coiled stalk of trimeric autotransporter adhesin C3363_RS05815 PF05662 Coiled stalk of trimeric autotransporter adhesin C3363_RS05815 PF13018 Extended Signal Peptide of Type V secretion system C3363_RS05820 PF01546 Peptidase family M20/M25/M40 C3363_RS05820 PF07687 Peptidase dimerisation domain C3363_RS05830 PF00899 ThiF family C3363_RS05835 PF01253 Translation initiation factor SUI1 C3363_RS05840 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C3363_RS05845 PF18073 Rubredoxin metal binding domain C3363_RS05850 PF06305 Lipopolysaccharide assembly protein A domain C3363_RS05855 PF00216 Bacterial DNA-binding protein C3363_RS05860 PF00575 S1 RNA binding domain C3363_RS05865 PF02224 Cytidylate kinase C3363_RS05870 PF13180 PDZ domain C3363_RS05880 PF00483 Nucleotidyl transferase C3363_RS05885 PF02599 Global regulator protein family C3363_RS05890 PF02272 DHHA1 domain C3363_RS05890 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C3363_RS05890 PF01411 tRNA synthetases class II (A) C3363_RS05895 PF00582 Universal stress protein family C3363_RS05900 PF13808 DDE_Tnp_1-associated C3363_RS05900 PF01609 Transposase DDE domain C3363_RS05905 PF00753 Metallo-beta-lactamase superfamily C3363_RS05905 PF03772 Competence protein C3363_RS05905 PF13567 Domain of unknown function (DUF4131) C3363_RS05910 PF03795 YCII-related domain C3363_RS05915 PF03061 Thioesterase superfamily C3363_RS05920 PF04279 Intracellular septation protein A C3363_RS05930 PF04217 Protein of unknown function, DUF412 C3363_RS05935 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C3363_RS05940 PF03880 DbpA RNA binding domain C3363_RS05940 PF00270 DEAD/DEAH box helicase C3363_RS05940 PF00271 Helicase conserved C-terminal domain C3363_RS05950 PF00013 KH domain C3363_RS05950 PF03725 3' exoribonuclease family, domain 2 C3363_RS05950 PF00575 S1 RNA binding domain C3363_RS05950 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain C3363_RS05950 PF01138 3' exoribonuclease family, domain 1 C3363_RS05955 PF00005 ABC transporter C3363_RS05955 PF06472 ABC transporter transmembrane region 2 C3363_RS05965 PF00149 Calcineurin-like phosphoesterase C3363_RS05965 PF02872 5'-nucleotidase, C-terminal domain C3363_RS05970 PF01219 Prokaryotic diacylglycerol kinase C3363_RS05975 PF00989 PAS fold C3363_RS05975 PF00072 Response regulator receiver domain C3363_RS05975 PF18415 Histidine kinase receptor ArcB trans-membrane domain C3363_RS05975 PF00512 His Kinase A (phospho-acceptor) domain C3363_RS05975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3363_RS05975 PF01627 Hpt domain C3363_RS05980 PF04453 LPS transport system D C3363_RS05980 PF03968 OstA-like protein C3363_RS05985 PF06969 HemN C-terminal domain C3363_RS05985 PF04055 Radical SAM superfamily C3363_RS05990 PF10675 Protein of unknown function (DUF2489) C3363_RS05995 PF04220 Der GTPase activator (YihI) C3363_RS06000 PF02698 DUF218 domain C3363_RS06005 PF00892 EamA-like transporter family C3363_RS06010 PF13247 4Fe-4S dicluster domain C3363_RS06010 PF12800 4Fe-4S binding domain C3363_RS06020 PF00575 S1 RNA binding domain C3363_RS06020 PF09371 Tex-like protein N-terminal domain C3363_RS06020 PF16921 Tex protein YqgF-like domain C3363_RS06020 PF17674 HHH domain C3363_RS06025 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3363_RS06025 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C3363_RS06030 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C3363_RS06030 PF00364 Biotin-requiring enzyme C3363_RS06030 PF02817 e3 binding domain C3363_RS06035 PF17831 Pyruvate dehydrogenase E1 component middle domain C3363_RS06035 PF00456 Transketolase, thiamine diphosphate binding domain C3363_RS06040 PF00731 AIR carboxylase C3363_RS06045 PF00710 Asparaginase, N-terminal C3363_RS06045 PF17763 Glutaminase/Asparaginase C-terminal domain C3363_RS06050 PF02222 ATP-grasp domain C3363_RS06050 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain C3363_RS06055 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C3363_RS06065 PF05662 Coiled stalk of trimeric autotransporter adhesin C3363_RS06065 PF03895 YadA-like membrane anchor domain C3363_RS06065 PF13018 Extended Signal Peptide of Type V secretion system C3363_RS06065 PF05658 Head domain of trimeric autotransporter adhesin C3363_RS06070 PF02773 S-adenosylmethionine synthetase, C-terminal domain C3363_RS06070 PF00438 S-adenosylmethionine synthetase, N-terminal domain C3363_RS06070 PF02772 S-adenosylmethionine synthetase, central domain C3363_RS06075 PF05430 S-adenosyl-L-methionine-dependent methyltransferase C3363_RS06075 PF01266 FAD dependent oxidoreductase C3363_RS06080 PF01784 NIF3 (NGG1p interacting factor 3) C3363_RS06095 PF00994 Probable molybdopterin binding domain C3363_RS06095 PF03454 MoeA C-terminal region (domain IV) C3363_RS06095 PF03453 MoeA N-terminal region (domain I and II) C3363_RS06105 PF01914 MarC family integral membrane protein C3363_RS06120 PF00004 ATPase family associated with various cellular activities (AAA) C3363_RS06120 PF06480 FtsH Extracellular C3363_RS06120 PF17862 AAA+ lid domain C3363_RS06120 PF01434 Peptidase family M41 C3363_RS06125 PF01728 FtsJ-like methyltransferase C3363_RS06145 PF00773 RNB domain C3363_RS06145 PF00575 S1 RNA binding domain C3363_RS06145 PF08206 Ribonuclease B OB domain C3363_RS06145 PF17876 Cold shock domain C3363_RS06150 PF06725 3D domain C3363_RS06150 PF03562 MltA specific insert domain C3363_RS06160 PF03895 YadA-like membrane anchor domain C3363_RS06160 PF05658 Head domain of trimeric autotransporter adhesin C3363_RS06160 PF13018 Extended Signal Peptide of Type V secretion system C3363_RS06160 PF05662 Coiled stalk of trimeric autotransporter adhesin C3363_RS06165 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin C3363_RS06165 PF13018 Extended Signal Peptide of Type V secretion system C3363_RS06165 PF03895 YadA-like membrane anchor domain C3363_RS06165 PF05662 Coiled stalk of trimeric autotransporter adhesin C3363_RS06170 PF09335 SNARE associated Golgi protein C3363_RS06175 PF00356 Bacterial regulatory proteins, lacI family C3363_RS06180 PF05175 Methyltransferase small domain C3363_RS06185 PF01713 Smr domain C3363_RS06190 PF03222 Tryptophan/tyrosine permease family C3363_RS06195 PF03222 Tryptophan/tyrosine permease family C3363_RS06205 PF08534 Redoxin C3363_RS06210 PF02683 Cytochrome C biogenesis protein transmembrane region C3363_RS06215 PF01641 SelR domain C3363_RS06215 PF01625 Peptide methionine sulfoxide reductase C3363_RS06225 PF08281 Sigma-70, region 4 C3363_RS06225 PF04542 Sigma-70 region 2 C3363_RS06340 PF03796 DnaB-like helicase C terminal domain C3363_RS06340 PF00772 DnaB-like helicase N terminal domain C3363_RS06390 PF01381 Helix-turn-helix C3363_RS06400 PF07411 Domain of unknown function (DUF1508) C3363_RS06440 PF00149 Calcineurin-like phosphoesterase C3363_RS06445 PF13406 Transglycosylase SLT domain C3363_RS06450 PF09157 Pseudouridine synthase II TruB, C-terminal C3363_RS06450 PF01509 TruB family pseudouridylate synthase (N terminal domain) C3363_RS06450 PF16198 tRNA pseudouridylate synthase B C-terminal domain C3363_RS06455 PF02033 Ribosome-binding factor A C3363_RS06475 PF01386 Ribosomal L25p family C3363_RS06480 PF00343 Carbohydrate phosphorylase C3363_RS06485 PF01810 LysE type translocator C3363_RS06490 PF16078 2-oxoglutarate dehydrogenase N-terminus C3363_RS06490 PF00676 Dehydrogenase E1 component C3363_RS06490 PF16870 2-oxoglutarate dehydrogenase C-terminal C3363_RS06490 PF02779 Transketolase, pyrimidine binding domain C3363_RS06495 PF00364 Biotin-requiring enzyme C3363_RS06495 PF02817 e3 binding domain C3363_RS06495 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C3363_RS06500 PF08442 ATP-grasp domain C3363_RS06500 PF00549 CoA-ligase C3363_RS06505 PF02629 CoA binding domain C3363_RS06505 PF00549 CoA-ligase C3363_RS06510 PF02254 TrkA-N domain C3363_RS06510 PF00999 Sodium/hydrogen exchanger family C3363_RS06515 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C3363_RS06515 PF02403 Seryl-tRNA synthetase N-terminal domain C3363_RS06520 PF04480 Protein of unknown function (DUF559) C3363_RS06525 PF01668 SmpB protein C3363_RS06530 PF04317 YcjX-like family, DUF463 C3363_RS06535 PF01494 FAD binding domain C3363_RS06540 PF02769 AIR synthase related protein, C-terminal domain C3363_RS06540 PF00586 AIR synthase related protein, N-terminal domain C3363_RS06545 PF03889 Alternative ribosome-rescue factor A C3363_RS06550 PF13649 Methyltransferase domain C3363_RS06555 PF01594 AI-2E family transporter C3363_RS06560 PF02547 Queuosine biosynthesis protein C3363_RS06565 PF04216 Protein involved in formate dehydrogenase formation C3363_RS06570 PF00884 Sulfatase C3363_RS06575 PF00111 2Fe-2S iron-sulfur cluster binding domain C3363_RS06575 PF03476 MOSC N-terminal beta barrel domain C3363_RS06575 PF03473 MOSC domain C3363_RS06580 PF02609 Exonuclease VII small subunit C3363_RS06585 PF00348 Polyprenyl synthetase C3363_RS06595 PF00378 Enoyl-CoA hydratase/isomerase C3363_RS06595 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C3363_RS06595 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C3363_RS06600 PF02803 Thiolase, C-terminal domain C3363_RS06600 PF00108 Thiolase, N-terminal domain C3363_RS06605 PF02589 LUD domain C3363_RS06610 PF02589 LUD domain C3363_RS06610 PF13183 4Fe-4S dicluster domain C3363_RS06610 PF11870 Domain of unknown function (DUF3390) C3363_RS06615 PF02754 Cysteine-rich domain C3363_RS06620 PF02652 L-lactate permease C3363_RS06625 PF00186 Dihydrofolate reductase C3363_RS06630 PF01472 PUA domain C3363_RS06630 PF00696 Amino acid kinase family C3363_RS06635 PF01925 Sulfite exporter TauE/SafE C3363_RS06640 PF00633 Helix-hairpin-helix motif C3363_RS06640 PF10576 Iron-sulfur binding domain of endonuclease III C3363_RS06640 PF00730 HhH-GPD superfamily base excision DNA repair protein C3363_RS06650 PF05662 Coiled stalk of trimeric autotransporter adhesin C3363_RS06650 PF03895 YadA-like membrane anchor domain C3363_RS06650 PF05658 Head domain of trimeric autotransporter adhesin C3363_RS06650 PF13018 Extended Signal Peptide of Type V secretion system C3363_RS06650 PF05658 Head domain of trimeric autotransporter adhesin C3363_RS06650 PF03895 YadA-like membrane anchor domain C3363_RS06650 PF13018 Extended Signal Peptide of Type V secretion system C3363_RS06650 PF05662 Coiled stalk of trimeric autotransporter adhesin C3363_RS06665 PF00210 Ferritin-like domain C3363_RS06670 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C3363_RS06675 PF04348 LppC putative lipoprotein C3363_RS06680 PF02021 Uncharacterised protein family UPF0102 C3363_RS06685 PF13580 SIS domain C3363_RS06690 PF04972 BON domain C3363_RS06695 PF00005 ABC transporter C3363_RS06700 PF02405 Permease MlaE C3363_RS06705 PF02470 MlaD protein C3363_RS06710 PF05494 MlaC protein C3363_RS06720 PF01722 BolA-like protein C3363_RS06725 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C3363_RS06730 PF00398 Ribosomal RNA adenine dimethylase C3363_RS06735 PF00639 PPIC-type PPIASE domain C3363_RS06735 PF09312 SurA N-terminal domain C3363_RS06740 PF00294 pfkB family carbohydrate kinase C3363_RS06740 PF01467 Cytidylyltransferase-like C3363_RS06745 PF01926 50S ribosome-binding GTPase C3363_RS06745 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C3363_RS06750 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain C3363_RS06750 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain C3363_RS06750 PF01488 Shikimate / quinate 5-dehydrogenase C3363_RS06755 PF02824 TGS domain C3363_RS06755 PF04607 Region found in RelA / SpoT proteins C3363_RS06755 PF13291 ACT domain C3363_RS06770 PF13288 DXP reductoisomerase C-terminal domain C3363_RS06770 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain C3363_RS06770 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C3363_RS06775 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) C3363_RS06780 PF00571 CBS domain C3363_RS06780 PF03471 Transporter associated domain C3363_RS06785 PF00795 Carbon-nitrogen hydrolase C3363_RS06790 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) C3363_RS06790 PF12008 Type I restriction and modification enzyme - subunit R C terminal C3363_RS06790 PF18766 SWI2/SNF2 ATPase C3363_RS06800 PF01420 Type I restriction modification DNA specificity domain C3363_RS06805 PF12161 HsdM N-terminal domain C3363_RS06805 PF02384 N-6 DNA Methylase C3363_RS06810 PF04542 Sigma-70 region 2 C3363_RS06810 PF08281 Sigma-70, region 4 C3363_RS06815 PF03873 Anti sigma-E protein RseA, C-terminal domain C3363_RS06815 PF03872 Anti sigma-E protein RseA, N-terminal domain C3363_RS06820 PF01928 CYTH domain C3363_RS06825 PF01293 Phosphoenolpyruvate carboxykinase C3363_RS06830 PF04977 Septum formation initiator C3363_RS06835 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C3363_RS06840 PF02542 YgbB family C3363_RS06845 PF03364 Polyketide cyclase / dehydrase and lipid transport C3363_RS06850 PF03658 RnfH family Ubiquitin C3363_RS06860 PF03701 Uncharacterised protein family (UPF0181) C3363_RS06865 PF00849 RNA pseudouridylate synthase C3363_RS06870 PF04287 tRNA pseudouridine synthase C C3363_RS06875 PF13580 SIS domain C3363_RS06880 PF03702 Anhydro-N-acetylmuramic acid kinase C3363_RS06885 PF04355 SmpA / OmlA family C3363_RS06890 PF04245 37-kD nucleoid-associated bacterial protein C3363_RS06905 PF01042 Endoribonuclease L-PSP C3363_RS06915 PF02910 Fumarate reductase flavoprotein C-term C3363_RS06915 PF00890 FAD binding domain C3363_RS06920 PF02674 Colicin V production protein C3363_RS06925 PF00156 Phosphoribosyl transferase domain C3363_RS06930 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) C3363_RS06935 PF00485 Phosphoribulokinase / Uridine kinase family C3363_RS06940 PF00877 NlpC/P60 family C3363_RS06945 PF00216 Bacterial DNA-binding protein C3363_RS06950 PF01588 Putative tRNA binding domain C3363_RS06950 PF03147 Ferredoxin-fold anticodon binding domain C3363_RS06950 PF03484 tRNA synthetase B5 domain C3363_RS06950 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain C3363_RS06950 PF03483 B3/4 domain C3363_RS06955 PF01409 tRNA synthetases class II core domain (F) C3363_RS06955 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C3363_RS06960 PF01865 Protein of unknown function DUF47 C3363_RS06965 PF01384 Phosphate transporter family C3363_RS06970 PF08239 Bacterial SH3 domain C3363_RS06980 PF05662 Coiled stalk of trimeric autotransporter adhesin C3363_RS06980 PF03895 YadA-like membrane anchor domain C3363_RS06980 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin C3363_RS06980 PF13018 Extended Signal Peptide of Type V secretion system C3363_RS06990 PF05658 Head domain of trimeric autotransporter adhesin C3363_RS06990 PF13018 Extended Signal Peptide of Type V secretion system C3363_RS06990 PF03895 YadA-like membrane anchor domain C3363_RS06990 PF05662 Coiled stalk of trimeric autotransporter adhesin C3363_RS07010 PF08328 Adenylosuccinate lyase C-terminal C3363_RS07010 PF00206 Lyase C3363_RS07015 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C3363_RS07015 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C3363_RS07020 PF00080 Copper/zinc superoxide dismutase (SODC) C3363_RS07025 PF12704 MacB-like periplasmic core domain C3363_RS07025 PF02687 FtsX-like permease family C3363_RS07060 PF01926 50S ribosome-binding GTPase C3363_RS07060 PF06071 Protein of unknown function (DUF933) C3363_RS07070 PF01195 Peptidyl-tRNA hydrolase C3363_RS07075 PF02753 Pili assembly chaperone PapD, C-terminal domain C3363_RS07075 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain C3363_RS07080 PF02753 Pili assembly chaperone PapD, C-terminal domain C3363_RS07080 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain C3363_RS07085 PF13954 PapC N-terminal domain C3363_RS07085 PF13953 PapC C-terminal domain C3363_RS07085 PF00577 Outer membrane usher protein C3363_RS07090 PF00920 Dehydratase family C3363_RS07110 PF13614 AAA domain C3363_RS07165 PF03592 Terminase small subunit C3363_RS07210 PF01040 UbiA prenyltransferase family C3363_RS07215 PF08220 DeoR-like helix-turn-helix domain C3363_RS07215 PF00455 DeoR C terminal sensor domain C3363_RS07220 PF00793 DAHP synthetase I family C3363_RS07225 PF13369 Transglutaminase-like superfamily C3363_RS07230 PF17827 PrmC N-terminal domain C3363_RS07230 PF13847 Methyltransferase domain C3363_RS07235 PF00472 RF-1 domain C3363_RS07235 PF03462 PCRF domain C3363_RS07240 PF00216 Bacterial DNA-binding protein C3363_RS07245 PF04222 Protein of unknown function (DUF416) C3363_RS07250 PF01208 Uroporphyrinogen decarboxylase (URO-D) C3363_RS07255 PF01263 Aldose 1-epimerase C3363_RS07260 PF14698 Argininosuccinate lyase C-terminal C3363_RS07260 PF00206 Lyase C3363_RS07265 PF00005 ABC transporter C3363_RS07265 PF08402 TOBE domain C3363_RS07270 PF00528 Binding-protein-dependent transport system inner membrane component C3363_RS07275 PF00528 Binding-protein-dependent transport system inner membrane component C3363_RS07280 PF03129 Anticodon binding domain C3363_RS07280 PF13393 Histidyl-tRNA synthetase C3363_RS07285 PF09976 Tetratricopeptide repeat-like domain C3363_RS07290 PF03807 NADP oxidoreductase coenzyme F420-dependent C3363_RS07290 PF14748 Pyrroline-5-carboxylate reductase dimerisation C3363_RS07295 PF12832 MFS_1 like family C3363_RS07305 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C3363_RS07305 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C3363_RS07310 PF03459 TOBE domain C3363_RS07310 PF00005 ABC transporter C3363_RS07315 PF00528 Binding-protein-dependent transport system inner membrane component C3363_RS07320 PF01066 CDP-alcohol phosphatidyltransferase C3363_RS07325 PF01541 GIY-YIG catalytic domain C3363_RS07325 PF02151 UvrB/uvrC motif C3363_RS07325 PF08459 UvrC Helix-hairpin-helix N-terminal C3363_RS07330 PF01435 Peptidase family M48 C3363_RS07335 PF11799 impB/mucB/samB family C-terminal domain C3363_RS07335 PF00817 impB/mucB/samB family C3363_RS07335 PF11798 IMS family HHH motif C3363_RS07340 PF03956 Lysine exporter LysO C3363_RS07345 PF01510 N-acetylmuramoyl-L-alanine amidase C3363_RS07350 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ C3363_RS07365 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain C3363_RS07365 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C3363_RS07375 PF00929 Exonuclease C3363_RS07380 PF01430 Hsp33 protein C3363_RS07385 PF01479 S4 domain C3363_RS07390 PF07497 Rho termination factor, RNA-binding domain C3363_RS07390 PF07498 Rho termination factor, N-terminal domain C3363_RS07390 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C3363_RS07395 PF00156 Phosphoribosyl transferase domain C3363_RS07410 PF06993 Protein of unknown function (DUF1304) C3363_RS07420 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C3363_RS07425 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain C3363_RS07425 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain C3363_RS07430 PF00459 Inositol monophosphatase family C3363_RS07440 PF08003 Protein of unknown function (DUF1698) C3363_RS07445 PF01197 Ribosomal protein L31 C3363_RS07455 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) C3363_RS07460 PF00534 Glycosyl transferases group 1 C3363_RS07460 PF13439 Glycosyltransferase Family 4 C3363_RS07470 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) C3363_RS07480 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C3363_RS07485 PF03466 LysR substrate binding domain C3363_RS07485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3363_RS07495 PF06733 DEAD_2 C3363_RS07495 PF13307 Helicase C-terminal domain C3363_RS07500 PF00933 Glycosyl hydrolase family 3 N terminal domain C3363_RS07505 PF05958 tRNA (Uracil-5-)-methyltransferase C3363_RS07510 PF00004 ATPase family associated with various cellular activities (AAA) C3363_RS07510 PF02190 ATP-dependent protease La (LON) substrate-binding domain C3363_RS07510 PF05362 Lon protease (S16) C-terminal proteolytic domain C3363_RS07515 PF04356 Protein of unknown function (DUF489) C3363_RS07520 PF05193 Peptidase M16 inactive domain C3363_RS07520 PF00675 Insulinase (Peptidase family M16) C3363_RS07520 PF16187 Middle or third domain of peptidase_M16 C3363_RS07525 PF00367 phosphotransferase system, EIIB C3363_RS07525 PF02378 Phosphotransferase system, EIIC C3363_RS07530 PF01235 Sodium:alanine symporter family C3363_RS07535 PF03900 Porphobilinogen deaminase, C-terminal domain C3363_RS07535 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain C3363_RS07545 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase C3363_RS07550 PF07219 HemY protein N-terminus C3363_RS07555 PF04269 Protein of unknown function, DUF440 C3363_RS07560 PF00196 Bacterial regulatory proteins, luxR family C3363_RS07560 PF17874 MalT-like TPR region C3363_RS07570 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C3363_RS07570 PF00005 ABC transporter C3363_RS07575 PF12911 N-terminal TM domain of oligopeptide transport permease C C3363_RS07575 PF00528 Binding-protein-dependent transport system inner membrane component C3363_RS07580 PF00528 Binding-protein-dependent transport system inner membrane component C3363_RS07585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3363_RS07590 PF05491 RuvB C-terminal winged helix domain C3363_RS07590 PF05496 Holliday junction DNA helicase RuvB P-loop domain C3363_RS07590 PF17864 RuvB AAA lid domain C3363_RS07595 PF02254 TrkA-N domain C3363_RS07595 PF00999 Sodium/hydrogen exchanger family C3363_RS07600 PF12633 Adenylate cyclase NT domain C3363_RS07600 PF01295 Adenylate cyclase, class-I C3363_RS07640 PF01985 CRS1 / YhbY (CRM) domain C3363_RS07645 PF00535 Glycosyl transferase family 2 C3363_RS07650 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3363_RS07660 PF00056 lactate/malate dehydrogenase, NAD binding domain C3363_RS07660 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C3363_RS07665 PF02863 Arginine repressor, C-terminal domain C3363_RS07665 PF01316 Arginine repressor, DNA binding domain C3363_RS07670 PF01370 NAD dependent epimerase/dehydratase family C3363_RS07670 PF08338 Domain of unknown function (DUF1731) C3363_RS07675 PF16363 GDP-mannose 4,6 dehydratase C3363_RS07680 PF01243 Pyridoxamine 5'-phosphate oxidase C3363_RS07685 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C3363_RS07690 PF00456 Transketolase, thiamine diphosphate binding domain C3363_RS07690 PF02779 Transketolase, pyrimidine binding domain C3363_RS07690 PF02780 Transketolase, C-terminal domain C3363_RS07695 PF00881 Nitroreductase family C3363_RS07700 PF04315 Elongation factor P hydroxylase C3363_RS07705 PF02348 Cytidylyltransferase C3363_RS07710 PF00300 Histidine phosphatase superfamily (branch 1) C3363_RS07715 PF00764 Arginosuccinate synthase C3363_RS07720 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) C3363_RS07725 PF02699 Preprotein translocase subunit C3363_RS07730 PF02355 Protein export membrane protein C3363_RS07730 PF13721 SecD export protein N-terminal TM region C3363_RS07730 PF07549 SecD/SecF GG Motif C3363_RS07735 PF02355 Protein export membrane protein C3363_RS07735 PF07549 SecD/SecF GG Motif C3363_RS07740 PF02684 Lipid-A-disaccharide synthetase C3363_RS07765 PF01118 Semialdehyde dehydrogenase, NAD binding domain C3363_RS07765 PF02774 Semialdehyde dehydrogenase, dimerisation domain C3363_RS07770 PF00381 PTS HPr component phosphorylation site C3363_RS07775 PF05524 PEP-utilising enzyme, N-terminal C3363_RS07775 PF02896 PEP-utilising enzyme, TIM barrel domain C3363_RS07775 PF00391 PEP-utilising enzyme, mobile domain C3363_RS07780 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C3363_RS07785 PF04055 Radical SAM superfamily C3363_RS07785 PF00919 Uncharacterized protein family UPF0004 C3363_RS07785 PF01938 TRAM domain C3363_RS07790 PF13018 Extended Signal Peptide of Type V secretion system C3363_RS07790 PF05658 Head domain of trimeric autotransporter adhesin C3363_RS07790 PF03895 YadA-like membrane anchor domain C3363_RS07790 PF05662 Coiled stalk of trimeric autotransporter adhesin C3363_RS07795 PF05662 Coiled stalk of trimeric autotransporter adhesin C3363_RS07795 PF03895 YadA-like membrane anchor domain C3363_RS07795 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin C3363_RS07795 PF13018 Extended Signal Peptide of Type V secretion system C3363_RS07805 PF02824 TGS domain C3363_RS07805 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C3363_RS07805 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C3363_RS07805 PF03129 Anticodon binding domain C3363_RS07810 PF01381 Helix-turn-helix C3363_RS07815 PF08264 Anticodon-binding domain of tRNA C3363_RS07815 PF13603 Leucyl-tRNA synthetase, Domain 2 C3363_RS07815 PF00133 tRNA synthetases class I (I, L, M and V) C3363_RS07820 PF04390 Lipopolysaccharide-assembly C3363_RS07825 PF14840 Processivity clamp loader gamma complex DNA pol III C-term C3363_RS07825 PF06144 DNA polymerase III, delta subunit C3363_RS07830 PF03884 DNA gyrase inhibitor YacG C3363_RS07835 PF01121 Dephospho-CoA kinase C3363_RS07840 PF03960 ArsC family C3363_RS07845 PF00809 Pterin binding enzyme C3363_RS07855 PF00293 NUDIX domain C3363_RS07860 PF01709 Transcriptional regulator C3363_RS07870 PF02075 Crossover junction endodeoxyribonuclease RuvC C3363_RS07875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C3363_RS07875 PF00005 ABC transporter C3363_RS07880 PF00005 ABC transporter C3363_RS07880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C3363_RS07885 PF00528 Binding-protein-dependent transport system inner membrane component C3363_RS07885 PF12911 N-terminal TM domain of oligopeptide transport permease C C3363_RS07890 PF00528 Binding-protein-dependent transport system inner membrane component C3363_RS07895 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3363_RS07900 PF05958 tRNA (Uracil-5-)-methyltransferase C3363_RS07900 PF01938 TRAM domain C3363_RS07905 PF13286 Phosphohydrolase-associated domain C3363_RS07905 PF01966 HD domain C3363_RS07910 PF03652 Holliday junction resolvase C3363_RS07915 PF02622 Uncharacterized ACR, COG1678 C3363_RS07920 PF04452 RNA methyltransferase C3363_RS07925 PF03923 Uncharacterized lipoprotein C3363_RS07930 PF01722 BolA-like protein C3363_RS07940 PF00849 RNA pseudouridylate synthase C3363_RS07940 PF01479 S4 domain C3363_RS07945 PF13525 Outer membrane lipoprotein C3363_RS07965 PF02769 AIR synthase related protein, C-terminal domain C3363_RS07965 PF00586 AIR synthase related protein, N-terminal domain C3363_RS07970 PF06574 FAD synthetase C3363_RS07970 PF01687 Riboflavin kinase C3363_RS07985 PF08264 Anticodon-binding domain of tRNA C3363_RS07985 PF00133 tRNA synthetases class I (I, L, M and V) C3363_RS07985 PF06827 Zinc finger found in FPG and IleRS C3363_RS07990 PF13091 PLD-like domain C3363_RS07995 PF01297 Zinc-uptake complex component A periplasmic C3363_RS08065 PF04221 RelB antitoxin C3363_RS08105 PF00574 Clp protease C3363_RS08135 PF00959 Phage lysozyme C3363_RS08195 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain C3363_RS08195 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain C3363_RS08195 PF06827 Zinc finger found in FPG and IleRS C3363_RS08200 PF05525 Branched-chain amino acid transport protein C3363_RS08210 PF00698 Acyl transferase domain C3363_RS08215 PF02677 Epoxyqueuosine reductase QueH C3363_RS08220 PF00348 Polyprenyl synthetase C3363_RS08225 PF00588 SpoU rRNA Methylase family C3363_RS08225 PF08032 RNA 2'-O ribose methyltransferase substrate binding C3363_RS08230 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C3363_RS08230 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C3363_RS08230 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C3363_RS08230 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C3363_RS08235 PF02525 Flavodoxin-like fold C3363_RS08240 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C3363_RS08250 PF08525 Opacity-associated protein A N-terminal motif C3363_RS08250 PF04225 Opacity-associated protein A LysM-like domain C3363_RS08265 PF00152 tRNA synthetases class II (D, K and N) C3363_RS08270 PF01026 TatD related DNase C3363_RS08275 PF07509 Protein of unknown function (DUF1523) C3363_RS08280 PF00149 Calcineurin-like phosphoesterase C3363_RS08285 PF00535 Glycosyl transferase family 2 C3363_RS08290 PF13291 ACT domain C3363_RS08290 PF04607 Region found in RelA / SpoT proteins C3363_RS08290 PF02824 TGS domain C3363_RS08295 PF01192 RNA polymerase Rpb6 C3363_RS08300 PF00923 Transaldolase/Fructose-6-phosphate aldolase C3363_RS08305 PF07690 Major Facilitator Superfamily C3363_RS08310 PF01370 NAD dependent epimerase/dehydratase family C3363_RS08315 PF00849 RNA pseudouridylate synthase C3363_RS08320 PF02575 YbaB/EbfC DNA-binding family C3363_RS08325 PF02132 RecR protein C3363_RS08325 PF13662 Toprim domain C3363_RS08330 PF00117 Glutamine amidotransferase class-I C3363_RS08330 PF06418 CTP synthase N-terminus C3363_RS08335 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C3363_RS08335 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C3363_RS08340 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) C3363_RS08345 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C3363_RS08345 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C3363_RS08345 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C3363_RS08345 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C3363_RS08350 PF00585 C-terminal regulatory domain of Threonine dehydratase C3363_RS08350 PF00291 Pyridoxal-phosphate dependent enzyme C3363_RS08355 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C3363_RS08365 PF01980 tRNA-methyltransferase O C3363_RS08365 PF18389 TrmO C-terminal domain C3363_RS08370 PF01040 UbiA prenyltransferase family C3363_RS08375 PF03966 Trm112p-like protein C3363_RS08380 PF02606 Tetraacyldisaccharide-1-P 4'-kinase C3363_RS08390 PF06228 Haem utilisation ChuX/HutX C3363_RS08395 PF01243 Pyridoxamine 5'-phosphate oxidase C3363_RS08400 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C3363_RS08400 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C3363_RS08410 PF03808 Glycosyl transferase WecB/TagA/CpsF family C3363_RS08415 PF06899 WzyE protein, O-antigen assembly polymerase C3363_RS08420 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 C3363_RS08425 PF00912 Transglycosylase C3363_RS08425 PF00905 Penicillin binding protein transpeptidase domain C3363_RS08425 PF14814 Bifunctional transglycosylase second domain C3363_RS08430 PF00528 Binding-protein-dependent transport system inner membrane component C3363_RS08435 PF00528 Binding-protein-dependent transport system inner membrane component C3363_RS08440 PF00497 Bacterial extracellular solute-binding proteins, family 3 C3363_RS08445 PF00005 ABC transporter C3363_RS08450 PF13361 UvrD-like helicase C-terminal domain C3363_RS08450 PF00580 UvrD/REP helicase N-terminal domain C3363_RS08455 PF03948 Ribosomal protein L9, C-terminal domain C3363_RS08455 PF01281 Ribosomal protein L9, N-terminal domain C3363_RS08460 PF01084 Ribosomal protein S18 C3363_RS08465 PF00436 Single-strand binding protein family C3363_RS08470 PF01250 Ribosomal protein S6 C3363_RS08475 PF07690 Major Facilitator Superfamily C3363_RS08490 PF01230 HIT domain C3363_RS08505 PF01521 Iron-sulphur cluster biosynthesis C3363_RS08505 PF01106 NifU-like domain C3363_RS08510 PF11973 NQRA C-terminal domain C3363_RS08510 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) C3363_RS08515 PF03116 NQR2, RnfD, RnfE family C3363_RS08520 PF04205 FMN-binding domain C3363_RS08525 PF02508 Rnf-Nqr subunit, membrane protein C3363_RS08530 PF02508 Rnf-Nqr subunit, membrane protein C3363_RS08535 PF00111 2Fe-2S iron-sulfur cluster binding domain C3363_RS08535 PF00970 Oxidoreductase FAD-binding domain C3363_RS08535 PF00175 Oxidoreductase NAD-binding domain C3363_RS08540 PF08780 Nucleotidyltransferase substrate binding protein like C3363_RS08545 PF01909 Nucleotidyltransferase domain C3363_RS08550 PF00528 Binding-protein-dependent transport system inner membrane component C3363_RS08555 PF02335 Cytochrome c552 C3363_RS08565 PF13247 4Fe-4S dicluster domain C3363_RS08570 PF03916 Polysulphide reductase, NrfD C3363_RS08575 PF04488 Glycosyltransferase sugar-binding region containing DXD motif C3363_RS08580 PF18429 Domain of unknown function (DUF5609) C3363_RS08585 PF10144 Bacterial virulence factor haemolysin C3363_RS08590 PF01176 Translation initiation factor 1A / IF-1 C3363_RS08595 PF03193 RsgA GTPase C3363_RS08600 PF01297 Zinc-uptake complex component A periplasmic C3363_RS08605 PF00005 ABC transporter C3363_RS08610 PF00950 ABC 3 transport family C3363_RS08615 PF00950 ABC 3 transport family C3363_RS08620 PF10008 Uncharacterized protein conserved in bacteria (DUF2251) C3363_RS08635 PF01381 Helix-turn-helix C3363_RS08640 PF00251 Glycosyl hydrolases family 32 N-terminal domain C3363_RS08640 PF08244 Glycosyl hydrolases family 32 C terminal C3363_RS08650 PF03831 PhnA domain C3363_RS08650 PF08274 PhnA Zinc-Ribbon C3363_RS08655 PF00551 Formyl transferase C3363_RS08660 PF10415 Fumarase C C-terminus C3363_RS08660 PF00206 Lyase C3363_RS08670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3363_RS08670 PF00183 Hsp90 protein C3363_RS08675 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family C3363_RS08680 PF01272 Transcription elongation factor, GreA/GreB, C-term C3363_RS08680 PF03449 Transcription elongation factor, N-terminal C3363_RS08685 PF00872 Transposase, Mutator family C3363_RS08700 PF00186 Dihydrofolate reductase C3363_RS08705 PF00005 ABC transporter C3363_RS08705 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C3363_RS08710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C3363_RS08710 PF00005 ABC transporter C3363_RS08715 PF00528 Binding-protein-dependent transport system inner membrane component C3363_RS08720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3363_RS08725 PF00075 RNase H C3363_RS08730 PF01842 ACT domain C3363_RS08730 PF00551 Formyl transferase C3363_RS08735 PF00816 H-NS histone family C3363_RS08740 PF03553 Na+/H+ antiporter family C3363_RS08745 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal C3363_RS08745 PF01578 Cytochrome C assembly protein C3363_RS08750 PF08534 Redoxin C3363_RS08755 PF03918 Cytochrome C biogenesis protein C3363_RS08760 PF03918 Cytochrome C biogenesis protein C3363_RS08765 PF08402 TOBE domain C3363_RS08765 PF00005 ABC transporter C3363_RS08775 PF13416 Bacterial extracellular solute-binding protein C3363_RS08780 PF03150 Di-haem cytochrome c peroxidase C3363_RS08780 PF00034 Cytochrome c C3363_RS08780 PF14376 Haem-binding domain C3363_RS08785 PF00312 Ribosomal protein S15 C3363_RS08790 PF00999 Sodium/hydrogen exchanger family C3363_RS08795 PF13145 PPIC-type PPIASE domain C3363_RS08800 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C3363_RS08800 PF01872 RibD C-terminal domain C3363_RS08805 PF00677 Lumazine binding domain C3363_RS08810 PF00925 GTP cyclohydrolase II C3363_RS08810 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C3363_RS08815 PF00885 6,7-dimethyl-8-ribityllumazine synthase C3363_RS08820 PF00005 ABC transporter C3363_RS08835 PF00497 Bacterial extracellular solute-binding proteins, family 3 C3363_RS08835 PF01464 Transglycosylase SLT domain C3363_RS08840 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain C3363_RS08840 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain C3363_RS08855 PF00589 Phage integrase family C3363_RS08930 PF01812 5-formyltetrahydrofolate cyclo-ligase family C3363_RS08940 PF05164 Cell division protein ZapA C3363_RS08945 PF03695 Uncharacterised protein family (UPF0149) C3363_RS08960 PF00117 Glutamine amidotransferase class-I C3363_RS08965 PF02646 RmuC family C3363_RS08970 PF00490 Delta-aminolevulinic acid dehydratase C3363_RS08975 PF00027 Cyclic nucleotide-binding domain C3363_RS08980 PF04055 Radical SAM superfamily C3363_RS08980 PF13186 Iron-sulfur cluster-binding domain C3363_RS08985 PF18337 RapA N-terminal Tudor like domain C3363_RS08985 PF12137 RNA polymerase recycling family C-terminal C3363_RS08985 PF00176 SNF2 family N-terminal domain C3363_RS08985 PF00271 Helicase conserved C-terminal domain C3363_RS08985 PF18339 RapA N-terminal Tudor like domain 1 C3363_RS08990 PF00342 Phosphoglucose isomerase C3363_RS08995 PF04380 Membrane fusogenic activity C3363_RS09020 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C3363_RS09020 PF08501 Shikimate dehydrogenase substrate binding domain C3363_RS09020 PF01488 Shikimate / quinate 5-dehydrogenase C3363_RS09025 PF01300 Telomere recombination C3363_RS09030 PF01396 Topoisomerase DNA binding C4 zinc finger C3363_RS09040 PF02631 RecX family C3363_RS09045 PF00154 recA bacterial DNA recombination protein C3363_RS09050 PF01063 Amino-transferase class IV C3363_RS09055 PF00425 chorismate binding enzyme C3363_RS09060 PF16916 Dimerisation domain of Zinc Transporter C3363_RS09060 PF01545 Cation efflux family C3363_RS09065 PF03848 Tellurite resistance protein TehB C3363_RS09065 PF09313 Domain of unknown function (DUF1971) C3363_RS09070 PF01207 Dihydrouridine synthase (Dus) C3363_RS09080 PF04542 Sigma-70 region 2 C3363_RS09080 PF04546 Sigma-70, non-essential region C3363_RS09080 PF04545 Sigma-70, region 4 C3363_RS09080 PF00140 Sigma-70 factor, region 1.2 C3363_RS09080 PF04539 Sigma-70 region 3 C3363_RS09080 PF03979 Sigma-70 factor, region 1.1 C3363_RS09085 PF08278 DNA primase DnaG DnaB-binding C3363_RS09085 PF08275 DNA primase catalytic core, N-terminal domain C3363_RS09085 PF01807 CHC2 zinc finger C3363_RS09085 PF10410 DnaB-helicase binding domain of primase C3363_RS09090 PF01165 Ribosomal protein S21 C3363_RS09105 PF00575 S1 RNA binding domain C3363_RS09105 PF10150 Ribonuclease E/G family C3363_RS09105 PF12111 Polyribonucleotide phosphorylase C terminal C3363_RS09110 PF01225 Mur ligase family, catalytic domain C3363_RS09110 PF08245 Mur ligase middle domain C3363_RS09110 PF02875 Mur ligase family, glutamate ligase domain C3363_RS09115 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain C3363_RS09120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3363_RS09125 PF00356 Bacterial regulatory proteins, lacI family C3363_RS09125 PF13407 Periplasmic binding protein domain C3363_RS09130 PF00158 Sigma-54 interaction domain C3363_RS09130 PF18024 Helix-turn-helix domain C3363_RS09135 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3363_RS09140 PF00528 Binding-protein-dependent transport system inner membrane component C3363_RS09145 PF02666 Phosphatidylserine decarboxylase C3363_RS09150 PF08534 Redoxin C3363_RS09155 PF03918 Cytochrome C biogenesis protein C3363_RS09160 PF03918 Cytochrome C biogenesis protein C3363_RS09170 PF17209 Hfq protein C3363_RS09175 PF16360 GTP-binding GTPase Middle Region C3363_RS09175 PF13167 GTP-binding GTPase N-terminal C3363_RS09175 PF01926 50S ribosome-binding GTPase C3363_RS09180 PF13419 Haloacid dehalogenase-like hydrolase C3363_RS09185 PF00480 ROK family C3363_RS09190 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase C3363_RS09195 PF04227 Indigoidine synthase A like protein C3363_RS09200 PF00294 pfkB family carbohydrate kinase C3363_RS09205 PF01156 Inosine-uridine preferring nucleoside hydrolase C3363_RS09210 PF01773 Na+ dependent nucleoside transporter N-terminus C3363_RS09210 PF07670 Nucleoside recognition C3363_RS09210 PF07662 Na+ dependent nucleoside transporter C-terminus C3363_RS09215 PF01791 DeoC/LacD family aldolase C3363_RS09220 PF01048 Phosphorylase superfamily C3363_RS09235 PF06185 YecM protein C3363_RS09240 PF00750 tRNA synthetases class I (R) C3363_RS09240 PF05746 DALR anticodon binding domain C3363_RS09240 PF03485 Arginyl tRNA synthetase N terminal domain C3363_RS09250 PF03143 Elongation factor Tu C-terminal domain C3363_RS09250 PF03144 Elongation factor Tu domain 2 C3363_RS09250 PF00009 Elongation factor Tu GTP binding domain C3363_RS09275 PF00485 Phosphoribulokinase / Uridine kinase family C3363_RS09280 PF05175 Methyltransferase small domain C3363_RS09285 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family C3363_RS09285 PF04055 Radical SAM superfamily C3363_RS09290 PF03099 Biotin/lipoate A/B protein ligase family C3363_RS09295 PF04359 Protein of unknown function (DUF493) C3363_RS09300 PF00768 D-alanyl-D-alanine carboxypeptidase C3363_RS09300 PF07943 Penicillin-binding protein 5, C-terminal domain C3363_RS09305 PF03330 Lytic transglycolase C3363_RS09305 PF05036 Sporulation related domain C3363_RS09310 PF01098 Cell cycle protein C3363_RS09315 PF03717 Penicillin-binding Protein dimerisation domain C3363_RS09315 PF00905 Penicillin binding protein transpeptidase domain C3363_RS09320 PF02590 Predicted SPOUT methyltransferase C3363_RS09340 PF17746 SfsA N-terminal OB domain C3363_RS09340 PF03749 Sugar fermentation stimulation protein RE domain C3363_RS09345 PF02378 Phosphotransferase system, EIIC C3363_RS09345 PF00367 phosphotransferase system, EIIB C3363_RS09350 PF00227 Proteasome subunit C3363_RS09355 PF10431 C-terminal, D2-small domain, of ClpB protein C3363_RS09355 PF07724 AAA domain (Cdc48 subfamily) C3363_RS09355 PF00004 ATPase family associated with various cellular activities (AAA) C3363_RS09360 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C3363_RS09360 PF16582 Middle domain of thiamine pyrophosphate C3363_RS09360 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C3363_RS09365 PF12697 Alpha/beta hydrolase family C3363_RS09370 PF10571 Uncharacterised protein family UPF0547 C3363_RS09375 PF02562 PhoH-like protein C3363_RS09385 PF18319 PriA DNA helicase Cys-rich region (CRR) domain C3363_RS09385 PF17764 3′ DNA-binding domain (3′BD) C3363_RS09385 PF00270 DEAD/DEAH box helicase C3363_RS09385 PF18074 Primosomal protein N C-terminal domain C3363_RS09385 PF00271 Helicase conserved C-terminal domain C3363_RS09390 PF00892 EamA-like transporter family C3363_RS09395 PF00892 EamA-like transporter family C3363_RS09400 PF00155 Aminotransferase class I and II C3363_RS09405 PF00425 chorismate binding enzyme C3363_RS09410 PF01569 PAP2 superfamily C3363_RS09415 PF00480 ROK family C3363_RS09420 PF00753 Metallo-beta-lactamase superfamily C3363_RS09420 PF16123 Hydroxyacylglutathione hydrolase C-terminus C3363_RS09425 PF01255 Putative undecaprenyl diphosphate synthase C3363_RS09435 PF02163 Peptidase family M50 C3363_RS09440 PF07244 Surface antigen variable number repeat C3363_RS09440 PF01103 Surface antigen C3363_RS09450 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD C3363_RS09450 PF00132 Bacterial transferase hexapeptide (six repeats) C3363_RS09455 PF07977 FabA-like domain C3363_RS09460 PF00132 Bacterial transferase hexapeptide (six repeats) C3363_RS09460 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 C3363_RS09465 PF00742 Homoserine dehydrogenase C3363_RS09465 PF01842 ACT domain C3363_RS09465 PF13840 ACT domain C3363_RS09465 PF03447 Homoserine dehydrogenase, NAD binding domain C3363_RS09465 PF00696 Amino acid kinase family C3363_RS09470 PF00288 GHMP kinases N terminal domain C3363_RS09470 PF08544 GHMP kinases C terminal C3363_RS09475 PF01817 Chorismate mutase type II C3363_RS09475 PF02153 Prephenate dehydrogenase C3363_RS09480 PF00793 DAHP synthetase I family C3363_RS09485 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C3363_RS09490 PF04358 DsrC like protein C3363_RS09500 PF01235 Sodium:alanine symporter family C3363_RS09505 PF03824 High-affinity nickel-transport protein C3363_RS09510 PF06226 Protein of unknown function (DUF1007) C3363_RS09520 PF01432 Peptidase family M3 C3363_RS09525 PF00800 Prephenate dehydratase C3363_RS09525 PF01817 Chorismate mutase type II C3363_RS09530 PF03167 Uracil DNA glycosylase superfamily C3363_RS09535 PF01228 Glycine radical C3363_RS09540 PF00289 Biotin carboxylase, N-terminal domain C3363_RS09540 PF02785 Biotin carboxylase C-terminal domain C3363_RS09540 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C3363_RS09545 PF00364 Biotin-requiring enzyme C3363_RS09550 PF01220 Dehydroquinase class II C3363_RS09555 PF06968 Biotin and Thiamin Synthesis associated domain C3363_RS09555 PF04055 Radical SAM superfamily C3363_RS09560 PF00132 Bacterial transferase hexapeptide (six repeats) C3363_RS09560 PF14602 Hexapeptide repeat of succinyl-transferase C3363_RS09560 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal C3363_RS09565 PF02620 Large ribosomal RNA subunit accumulation protein YceD C3363_RS09570 PF01783 Ribosomal L32p protein family C3363_RS09575 PF02504 Fatty acid synthesis protein C3363_RS09580 PF00202 Aminotransferase class-III C3363_RS09585 PF00282 Pyridoxal-dependent decarboxylase conserved domain C3363_RS09590 PF01513 ATP-NAD kinase C3363_RS09595 PF01138 3' exoribonuclease family, domain 1 C3363_RS09595 PF03725 3' exoribonuclease family, domain 2 C3363_RS09600 PF08340 Domain of unknown function (DUF1732) C3363_RS09600 PF03755 YicC-like family, N-terminal region C3363_RS09605 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain C3363_RS09605 PF01565 FAD binding domain C3363_RS09610 PF02237 Biotin protein ligase C terminal domain C3363_RS09610 PF03099 Biotin/lipoate A/B protein ligase family C3363_RS09610 PF08279 HTH domain C3363_RS09615 PF04304 Protein of unknown function (DUF454) C3363_RS09620 PF00994 Probable molybdopterin binding domain C3363_RS09625 PF00543 Nitrogen regulatory protein P-II C3363_RS09630 PF01252 Signal peptidase (SPase) II C3363_RS09635 PF02401 LytB protein C3363_RS09640 PF03937 Flavinator of succinate dehydrogenase C3363_RS09645 PF14815 NUDIX domain C3363_RS09645 PF00730 HhH-GPD superfamily base excision DNA repair protein C3363_RS09650 PF04362 Bacterial Fe(2+) trafficking C3363_RS09655 PF01464 Transglycosylase SLT domain C3363_RS09655 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain C3363_RS09670 PF02754 Cysteine-rich domain C3363_RS09670 PF13183 4Fe-4S dicluster domain C3363_RS09675 PF00890 FAD binding domain C3363_RS09680 PF04324 BFD-like [2Fe-2S] binding domain C3363_RS09680 PF01266 FAD dependent oxidoreductase C3363_RS09695 PF01479 S4 domain C3363_RS09695 PF00849 RNA pseudouridylate synthase C3363_RS09700 PF05552 Conserved TM helix C3363_RS09700 PF00924 Mechanosensitive ion channel C3363_RS09705 PF01435 Peptidase family M48 C3363_RS09710 PF00719 Inorganic pyrophosphatase C3363_RS09715 PF00176 SNF2 family N-terminal domain C3363_RS09715 PF00271 Helicase conserved C-terminal domain C3363_RS09720 PF02661 Fic/DOC family C3363_RS09720 PF13784 Fic/DOC family N-terminal C3363_RS09730 PF01555 DNA methylase C3363_RS09730 PF18273 Type III R-M EcoP15I C-terminal domain C3363_RS09740 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain C3363_RS09740 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain C3363_RS09820 PF02447 GntP family permease C3363_RS09825 PF01370 NAD dependent epimerase/dehydratase family C3363_RS09830 PF01261 Xylose isomerase-like TIM barrel C3363_RS09835 PF00596 Class II Aldolase and Adducin N-terminal domain C3363_RS09840 PF17042 Nucleotide-binding C-terminal domain C3363_RS09840 PF07005 Sugar-binding N-terminal domain C3363_RS09845 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C3363_RS09845 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C3363_RS09850 PF08220 DeoR-like helix-turn-helix domain C3363_RS09850 PF00455 DeoR C terminal sensor domain C3363_RS09860 PF00043 Glutathione S-transferase, C-terminal domain C3363_RS09860 PF02798 Glutathione S-transferase, N-terminal domain C3363_RS09880 PF18075 FtsX extracellular domain C3363_RS09885 PF00005 ABC transporter C3363_RS09890 PF00448 SRP54-type protein, GTPase domain C3363_RS09890 PF02881 SRP54-type protein, helical bundle domain C3363_RS09930 PF00155 Aminotransferase class I and II C3363_RS09930 PF00392 Bacterial regulatory proteins, gntR family C3363_RS09935 PF07804 HipA-like C-terminal domain C3363_RS09935 PF13657 HipA N-terminal domain C3363_RS09955 PF13808 DDE_Tnp_1-associated C3363_RS09955 PF01609 Transposase DDE domain C3363_RS09960 PF02110 Hydroxyethylthiazole kinase family C3363_RS09965 PF08543 Phosphomethylpyrimidine kinase C3363_RS09970 PF02581 Thiamine monophosphate synthase C3363_RS09980 PF17761 DUF1016 N-terminal domain C3363_RS09980 PF06250 YhcG PDDEXK nuclease domain C3363_RS09990 PF03060 Nitronate monooxygenase C3363_RS10000 PF00106 short chain dehydrogenase C3363_RS10005 PF06719 AraC-type transcriptional regulator N-terminus C3363_RS10005 PF12833 Helix-turn-helix domain C3363_RS10020 PF09278 MerR, DNA binding C3363_RS10020 PF00376 MerR family regulatory protein C3363_RS10030 PF13411 MerR HTH family regulatory protein C3363_RS10045 PF18273 Type III R-M EcoP15I C-terminal domain C3363_RS10045 PF01555 DNA methylase C3363_RS10050 PF04851 Type III restriction enzyme, res subunit C3363_RS10050 PF08774 VRR-NUC domain C3363_RS10070 PF07804 HipA-like C-terminal domain C3363_RS10070 PF13657 HipA N-terminal domain C3363_RS10085 PF01523 Putative modulator of DNA gyrase C3363_RS10090 PF00584 SecE/Sec61-gamma subunits of protein translocation complex C3363_RS10095 PF00467 KOW motif C3363_RS10095 PF02357 Transcription termination factor nusG C3363_RS10105 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C3363_RS10105 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C3363_RS10115 PF02615 Malate/L-lactate dehydrogenase C3363_RS10120 PF01614 Bacterial transcriptional regulator C3363_RS10120 PF09339 IclR helix-turn-helix domain C3363_RS10125 PF12804 MobA-like NTP transferase domain C3363_RS10130 PF06288 Protein of unknown function (DUF1040) C3363_RS10135 PF01323 DSBA-like thioredoxin domain C3363_RS10140 PF00578 AhpC/TSA family C3363_RS10145 PF00440 Bacterial regulatory proteins, tetR family C3363_RS10150 PF03466 LysR substrate binding domain C3363_RS10150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3363_RS10155 PF01925 Sulfite exporter TauE/SafE C3363_RS10160 PF00474 Sodium:solute symporter family C3363_RS10170 PF16347 Domain of unknown function (DUF4976) C3363_RS10175 PF00834 Ribulose-phosphate 3 epimerase family C3363_RS10180 PF01197 Ribosomal protein L31 C3363_RS10185 PF00444 Ribosomal protein L36 C3363_RS10190 PF12838 4Fe-4S dicluster domain C3363_RS10190 PF13187 4Fe-4S dicluster domain C3363_RS10195 PF03927 NapD protein C3363_RS10200 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C3363_RS10200 PF00384 Molybdopterin oxidoreductase C3363_RS10200 PF01568 Molydopterin dinucleotide binding domain C3363_RS10200 PF10518 TAT (twin-arginine translocation) pathway signal sequence C3363_RS10205 PF12838 4Fe-4S dicluster domain C3363_RS10205 PF12800 4Fe-4S binding domain C3363_RS10210 PF12801 4Fe-4S binding domain C3363_RS10210 PF12837 4Fe-4S binding domain C3363_RS10215 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) C3363_RS10220 PF03264 NapC/NirT cytochrome c family, N-terminal region C3363_RS10225 PF00356 Bacterial regulatory proteins, lacI family C3363_RS10225 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C3363_RS10230 PF01202 Shikimate kinase C3363_RS10235 PF02447 GntP family permease C3363_RS10240 PF03819 MazG nucleotide pyrophosphohydrolase domain C3363_RS10245 PF03641 Possible lysine decarboxylase C3363_RS10260 PF00596 Class II Aldolase and Adducin N-terminal domain C3363_RS10265 PF01261 Xylose isomerase-like TIM barrel C3363_RS10270 PF03611 PTS system sugar-specific permease component C3363_RS10275 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C3363_RS10280 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C3363_RS10285 PF01220 Dehydroquinase class II C3363_RS10310 PF12631 MnmE helical domain C3363_RS10310 PF10396 GTP-binding protein TrmE N-terminus C3363_RS10310 PF01926 50S ribosome-binding GTPase C3363_RS10315 PF00106 short chain dehydrogenase C3363_RS10320 PF11412 Disulphide bond corrector protein DsbC C3363_RS10320 PF13098 Thioredoxin-like domain C3363_RS10320 PF02683 Cytochrome C biogenesis protein transmembrane region C3363_RS10325 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C3363_RS10325 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C3363_RS10325 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C3363_RS10330 PF02350 UDP-N-acetylglucosamine 2-epimerase C3363_RS10340 PF00953 Glycosyl transferase family 4 C3363_RS10345 PF00202 Aminotransferase class-III C3363_RS10355 PF01420 Type I restriction modification DNA specificity domain C3363_RS10360 PF02384 N-6 DNA Methylase C3363_RS10380 PF01571 Aminomethyltransferase folate-binding domain C3363_RS10385 PF01351 Ribonuclease HII C3363_RS10390 PF04403 Paraquat-inducible protein A C3363_RS10395 PF03737 Aldolase/RraA C3363_RS10400 PF05658 Head domain of trimeric autotransporter adhesin C3363_RS10400 PF05662 Coiled stalk of trimeric autotransporter adhesin C3363_RS10400 PF13018 Extended Signal Peptide of Type V secretion system C3363_RS10400 PF03895 YadA-like membrane anchor domain C3363_RS10405 PF03895 YadA-like membrane anchor domain C3363_RS10405 PF13018 Extended Signal Peptide of Type V secretion system C3363_RS10405 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin C3363_RS10405 PF05662 Coiled stalk of trimeric autotransporter adhesin C3363_RS10415 PF01476 LysM domain C3363_RS10415 PF01551 Peptidase family M23 C3363_RS10420 PF01476 LysM domain C3363_RS10420 PF01551 Peptidase family M23 C3363_RS10425 PF09335 SNARE associated Golgi protein C3363_RS10430 PF01975 Survival protein SurE C3363_RS10440 PF00121 Triosephosphate isomerase C3363_RS10460 PF02618 YceG-like family C3363_RS10465 PF02223 Thymidylate kinase C3363_RS10480 PF09115 DNA polymerase III, delta subunit, C terminal C3363_RS10485 PF13335 Magnesium chelatase, subunit ChlI C-terminal C3363_RS10485 PF01078 Magnesium chelatase, subunit ChlI C3363_RS10505 PF01494 FAD binding domain C3363_RS10510 PF17946 RecC C-terminal domain C3363_RS10515 PF00762 Ferrochelatase C3363_RS10520 PF03830 PTS system sorbose subfamily IIB component C3363_RS10520 PF03610 PTS system fructose IIA component C3363_RS10525 PF03609 PTS system sorbose-specific iic component C3363_RS10530 PF03613 PTS system mannose/fructose/sorbose family IID component C3363_RS10535 PF06173 Protein of unknown function (DUF986) C3363_RS10540 PF01238 Phosphomannose isomerase type I C3363_RS10545 PF00005 ABC transporter C3363_RS10550 PF02653 Branched-chain amino acid transport system / permease component C3363_RS10555 PF13407 Periplasmic binding protein domain C3363_RS10575 PF01638 HxlR-like helix-turn-helix C3363_RS10590 PF18766 SWI2/SNF2 ATPase C3363_RS10590 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) C3363_RS10590 PF12008 Type I restriction and modification enzyme - subunit R C terminal C3363_RS10615 PF12161 HsdM N-terminal domain C3363_RS10615 PF02384 N-6 DNA Methylase C3363_RS10635 PF07681 DoxX C3363_RS10640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3363_RS10640 PF03466 LysR substrate binding domain C3363_RS10645 PF00687 Ribosomal protein L1p/L10e family C3363_RS10650 PF03946 Ribosomal protein L11, N-terminal domain C3363_RS10650 PF00298 Ribosomal protein L11, RNA binding domain C3363_RS10655 PF00877 NlpC/P60 family C3363_RS10660 PF01261 Xylose isomerase-like TIM barrel C3363_RS10705 PF00501 AMP-binding enzyme C3363_RS10710 PF04364 DNA polymerase III chi subunit, HolC C3363_RS10725 PF00288 GHMP kinases N terminal domain C3363_RS10725 PF08544 GHMP kinases C terminal C3363_RS10725 PF10509 Galactokinase galactose-binding signature C3363_RS10730 PF01263 Aldose 1-epimerase C3363_RS10735 PF03932 CutC family C3363_RS10740 PF00294 pfkB family carbohydrate kinase C3363_RS10745 PF00550 Phosphopantetheine attachment site C3363_RS10750 PF04073 Aminoacyl-tRNA editing domain C3363_RS10750 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C3363_RS10750 PF03129 Anticodon binding domain C3363_RS10755 PF03797 Autotransporter beta-domain C3363_RS10755 PF12951 Passenger-associated-transport-repeat C3363_RS10755 PF00082 Subtilase family C3363_RS10765 PF13333 Integrase core domain C3363_RS10765 PF00665 Integrase core domain C3363_RS10765 PF13276 HTH-like domain C3363_RS10780 PF08543 Phosphomethylpyrimidine kinase C3363_RS10790 PF02508 Rnf-Nqr subunit, membrane protein C3363_RS10795 PF04060 Putative Fe-S cluster C3363_RS10800 PF12838 4Fe-4S dicluster domain C3363_RS10800 PF13375 RnfC Barrel sandwich hybrid domain C3363_RS10800 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C3363_RS10805 PF03458 UPF0126 domain C3363_RS10810 PF03116 NQR2, RnfD, RnfE family C3363_RS10815 PF04205 FMN-binding domain C3363_RS10820 PF02508 Rnf-Nqr subunit, membrane protein C3363_RS10825 PF03279 Bacterial lipid A biosynthesis acyltransferase C3363_RS10830 PF08241 Methyltransferase domain C3363_RS10835 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3363_RS10840 PF00899 ThiF family C3363_RS10850 PF12704 MacB-like periplasmic core domain C3363_RS10850 PF02687 FtsX-like permease family C3363_RS10855 PF00005 ABC transporter C3363_RS10860 PF00484 Carbonic anhydrase C3363_RS10865 PF00106 short chain dehydrogenase C3363_RS10875 PF03738 Glutathionylspermidine synthase preATP-grasp C3363_RS10880 PF00860 Permease family C3363_RS10885 PF00860 Permease family C3363_RS10895 PF01145 SPFH domain / Band 7 family C3363_RS10895 PF16200 C-terminal region of band_7 C3363_RS10900 PF00842 Alanine racemase, C-terminal domain C3363_RS10900 PF01168 Alanine racemase, N-terminal domain C3363_RS10905 PF00579 tRNA synthetases class I (W and Y) C3363_RS10905 PF01479 S4 domain C3363_RS10910 PF11898 Domain of unknown function (DUF3418) C3363_RS10910 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold C3363_RS10910 PF04408 Helicase associated domain (HA2) C3363_RS10910 PF00271 Helicase conserved C-terminal domain C3363_RS10910 PF00270 DEAD/DEAH box helicase C3363_RS10915 PF04284 Protein of unknown function (DUF441) C3363_RS10925 PF01025 GrpE C3363_RS10930 PF01336 OB-fold nucleic acid binding domain C3363_RS10930 PF02938 GAD domain C3363_RS10930 PF00152 tRNA synthetases class II (D, K and N) C3363_RS10945 PF12705 PD-(D/E)XK nuclease superfamily C3363_RS10945 PF00580 UvrD/REP helicase N-terminal domain C3363_RS10945 PF13361 UvrD-like helicase C-terminal domain C3363_RS10955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3363_RS10955 PF03466 LysR substrate binding domain C3363_RS10990 PF00120 Glutamine synthetase, catalytic domain C3363_RS10990 PF03951 Glutamine synthetase, beta-Grasp domain C3363_RS10995 PF00294 pfkB family carbohydrate kinase C3363_RS11000 PF13407 Periplasmic binding protein domain C3363_RS11005 PF02653 Branched-chain amino acid transport system / permease component C3363_RS11010 PF00005 ABC transporter C3363_RS11015 PF05025 RbsD / FucU transport protein family C3363_RS11020 PF00356 Bacterial regulatory proteins, lacI family C3363_RS11025 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain C3363_RS11030 PF02874 ATP synthase alpha/beta family, beta-barrel domain C3363_RS11030 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C3363_RS11035 PF00231 ATP synthase C3363_RS11040 PF02874 ATP synthase alpha/beta family, beta-barrel domain C3363_RS11040 PF00306 ATP synthase alpha/beta chain, C terminal domain C3363_RS11040 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C3363_RS11045 PF00213 ATP synthase delta (OSCP) subunit C3363_RS11050 PF00430 ATP synthase B/B' CF(0) C3363_RS11055 PF00137 ATP synthase subunit C C3363_RS11060 PF00119 ATP synthase A chain C3363_RS11070 PF03600 Citrate transporter C3363_RS11070 PF02080 TrkA-C domain C3363_RS11085 PF13859 BNR repeat-like domain C3363_RS11090 PF00366 Ribosomal protein S17 C3363_RS11095 PF00831 Ribosomal L29 protein C3363_RS11100 PF00252 Ribosomal protein L16p/L10e C3363_RS11105 PF00189 Ribosomal protein S3, C-terminal domain C3363_RS11105 PF07650 KH domain C3363_RS11110 PF00237 Ribosomal protein L22p/L17e C3363_RS11115 PF00203 Ribosomal protein S19 C3363_RS11120 PF00181 Ribosomal Proteins L2, RNA binding domain C3363_RS11120 PF03947 Ribosomal Proteins L2, C-terminal domain C3363_RS11125 PF00276 Ribosomal protein L23 C3363_RS11130 PF00573 Ribosomal protein L4/L1 family C3363_RS11135 PF00297 Ribosomal protein L3 C3363_RS11140 PF00338 Ribosomal protein S10p/S20e C3363_RS11150 PF10415 Fumarase C C-terminus C3363_RS11150 PF00206 Lyase C3363_RS11155 PF02785 Biotin carboxylase C-terminal domain C3363_RS11155 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C3363_RS11155 PF00289 Biotin carboxylase, N-terminal domain C3363_RS11170 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C3363_RS11170 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C3363_RS11175 PF03222 Tryptophan/tyrosine permease family C3363_RS11180 PF00488 MutS domain V C3363_RS11180 PF05192 MutS domain III C3363_RS11180 PF05188 MutS domain II C3363_RS11180 PF01624 MutS domain I C3363_RS11180 PF05190 MutS family domain IV C3363_RS11190 PF00595 PDZ domain C3363_RS11195 PF02554 Carbon starvation protein CstA C3363_RS11215 PF02556 Preprotein translocase subunit SecB C3363_RS11220 PF00581 Rhodanese-like domain C3363_RS11225 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C3363_RS11225 PF05697 Bacterial trigger factor protein (TF) C3363_RS11225 PF05698 Bacterial trigger factor protein (TF) C-terminus C3363_RS11245 PF00557 Metallopeptidase family M24 C3363_RS11250 PF01380 SIS domain C3363_RS11255 PF08220 DeoR-like helix-turn-helix domain C3363_RS11255 PF00455 DeoR C terminal sensor domain C3363_RS11290 PF04076 Bacterial OB fold (BOF) protein C3363_RS11295 PF17191 RecG wedge domain C3363_RS11295 PF00271 Helicase conserved C-terminal domain C3363_RS11295 PF00270 DEAD/DEAH box helicase C3363_RS11300 PF08007 Cupin superfamily protein C3363_RS11305 PF09825 Biotin-protein ligase, N terminal C3363_RS11310 PF02632 BioY family C3363_RS11320 PF00156 Phosphoribosyl transferase domain C3363_RS11325 PF01026 TatD related DNase C3363_RS11330 PF08461 Ribonuclease R winged-helix domain C3363_RS11330 PF08206 Ribonuclease B OB domain C3363_RS11330 PF17876 Cold shock domain C3363_RS11330 PF00773 RNB domain C3363_RS11330 PF00575 S1 RNA binding domain C3363_RS11335 PF03605 Anaerobic c4-dicarboxylate membrane transporter