GFO_RS00030 SM00342 helix_turn_helix, arabinose operon control protein GFO_RS00030 SM00387 Histidine kinase-like ATPases GFO_RS00030 SM00388 His Kinase A (phosphoacceptor) domain GFO_RS00030 SM00448 cheY-homologous receiver domain GFO_RS00040 SM00640 Glycosyl hydrolases family 32 GFO_RS00080 SM00028 Tetratricopeptide repeats GFO_RS00080 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain GFO_RS00170 SM00342 helix_turn_helix, arabinose operon control protein GFO_RS00170 SM00387 Histidine kinase-like ATPases GFO_RS00170 SM00388 His Kinase A (phosphoacceptor) domain GFO_RS00170 SM00448 cheY-homologous receiver domain GFO_RS00185 SM00822 GFO_RS00185 GFO_RS00205 SM00344 helix_turn_helix ASNC type GFO_RS00270 SM00112 Cadherin repeats. GFO_RS00300 SM00782 PhnA Zinc-Ribbon GFO_RS00315 SM00534 ATPase domain of DNA mismatch repair MUTS family GFO_RS00350 SM00729 Elongator protein 3, MiaB family, Radical SAM GFO_RS00370 SM00028 Tetratricopeptide repeats GFO_RS00425 SM00870 GFO_RS00425 GFO_RS00505 SM00344 helix_turn_helix ASNC type GFO_RS00570 SM00710 Parallel beta-helix repeats GFO_RS00580 SM00448 cheY-homologous receiver domain GFO_RS00580 SM00862 Transcriptional regulatory protein, C terminal GFO_RS00585 SM00387 Histidine kinase-like ATPases GFO_RS00585 SM00388 His Kinase A (phosphoacceptor) domain GFO_RS00690 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs GFO_RS00690 SM00474 3'-5' exonuclease GFO_RS00690 SM00475 5'-3' exonuclease GFO_RS00690 SM00482 DNA polymerase A domain GFO_RS00730 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) GFO_RS00730 SM00091 PAS domain GFO_RS00730 SM00387 Histidine kinase-like ATPases GFO_RS00730 SM01079 GFO_RS00730 GFO_RS00735 SM00448 cheY-homologous receiver domain GFO_RS00770 SM00322 K homology RNA-binding domain GFO_RS00825 SM00382 ATPases associated with a variety of cellular activities GFO_RS00840 SM00342 helix_turn_helix, arabinose operon control protein GFO_RS00870 SM00919 Malic enzyme, NAD binding domain GFO_RS00870 SM01274 GFO_RS00870 GFO_RS00875 SM00278 Helix-hairpin-helix DNA-binding motif class 1 GFO_RS00950 SM00382 ATPases associated with a variety of cellular activities GFO_RS01015 SM00935 Outer membrane protein (OmpH-like) GFO_RS01020 SM00935 Outer membrane protein (OmpH-like) GFO_RS01085 SM00382 ATPases associated with a variety of cellular activities GFO_RS01085 SM00994 ClpX C4-type zinc finger GFO_RS01085 SM01086 C-terminal, D2-small domain, of ClpB protein GFO_RS01105 SM00422 helix_turn_helix, mercury resistance GFO_RS01115 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain GFO_RS01155 SM00047 Lysozyme subfamily 2 GFO_RS01155 SM00257 Lysin motif GFO_RS01165 SM01266 GFO_RS01165 GFO_RS01220 SM00382 ATPases associated with a variety of cellular activities GFO_RS01225 SM00533 DNA-binding domain of DNA mismatch repair MUTS family GFO_RS01225 SM00534 ATPase domain of DNA mismatch repair MUTS family GFO_RS01305 SM00530 Helix-turn-helix XRE-family like proteins GFO_RS01335 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. GFO_RS01415 SM00893 Electron transfer flavoprotein domain GFO_RS01420 SM00893 Electron transfer flavoprotein domain GFO_RS01425 SM00861 Transketolase, pyrimidine binding domain GFO_RS01450 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen GFO_RS01620 SM00382 ATPases associated with a variety of cellular activities GFO_RS01640 SM00830 Chorismate mutase type II GFO_RS01725 SM00421 helix_turn_helix, Lux Regulon GFO_RS01755 SM00060 Fibronectin type 3 domain GFO_RS01760 SM01217 GFO_RS01760 GFO_RS01810 SM01034 Sensors of blue-light using FAD GFO_RS01820 SM00316 Ribosomal protein S1-like RNA-binding domain GFO_RS01820 SM00322 K homology RNA-binding domain GFO_RS01825 SM01387 GFO_RS01825 GFO_RS01880 SM00560 LamG-like jellyroll fold domain GFO_RS01925 SM00900 GFO_RS01925 GFO_RS02020 SM00357 Cold shock protein domain GFO_RS02020 SM00382 ATPases associated with a variety of cellular activities GFO_RS02020 SM00959 Rho termination factor, N-terminal domain GFO_RS02040 SM00382 ATPases associated with a variety of cellular activities GFO_RS02095 SM01092 CO dehydrogenase flavoprotein C-terminal domain GFO_RS02100 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain GFO_RS02110 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain GFO_RS02150 SM00852 Probable molybdopterin binding domain GFO_RS02155 SM00729 Elongator protein 3, MiaB family, Radical SAM GFO_RS02160 SM00852 Probable molybdopterin binding domain GFO_RS02175 SM00028 Tetratricopeptide repeats GFO_RS02175 SM00387 Histidine kinase-like ATPases GFO_RS02180 SM00448 cheY-homologous receiver domain GFO_RS02230 SM01230 GFO_RS02230 GFO_RS02245 SM00382 ATPases associated with a variety of cellular activities GFO_RS02260 SM00937 GFO_RS02260 GFO_RS02265 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family GFO_RS02305 SM00344 helix_turn_helix ASNC type GFO_RS02340 SM00938 Nitrogen regulatory protein P-II GFO_RS02350 SM00871 Bacterial transcription activator, effector binding domain GFO_RS02385 SM00867 YceI-like domain GFO_RS02395 SM00271 DnaJ molecular chaperone homology domain GFO_RS02400 SM00382 ATPases associated with a variety of cellular activities GFO_RS02420 SM00382 ATPases associated with a variety of cellular activities GFO_RS02420 SM00448 cheY-homologous receiver domain GFO_RS02450 SM00014 Acid phosphatase homologues GFO_RS02490 SM00465 GIY-YIG type nucleases (URI domain) GFO_RS02515 SM00957 SecA DEAD-like domain GFO_RS02515 SM00958 SecA preprotein cross-linking domain GFO_RS02535 SM00382 ATPases associated with a variety of cellular activities GFO_RS02545 SM00382 ATPases associated with a variety of cellular activities GFO_RS02585 SM00382 ATPases associated with a variety of cellular activities GFO_RS02700 SM00858 GFO_RS02700 GFO_RS02795 SM00382 ATPases associated with a variety of cellular activities GFO_RS02810 SM00116 Domain in cystathionine beta-synthase and other proteins. GFO_RS02815 SM00341 Helicase and RNase D C-terminal GFO_RS02815 SM00487 DEAD-like helicases superfamily GFO_RS02815 SM00490 helicase superfamily c-terminal domain GFO_RS02815 SM00956 GFO_RS02815 GFO_RS02825 SM00861 Transketolase, pyrimidine binding domain GFO_RS02850 SM00382 ATPases associated with a variety of cellular activities GFO_RS02880 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain GFO_RS02935 SM00487 DEAD-like helicases superfamily GFO_RS02960 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GFO_RS02965 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. GFO_RS02995 SM00226 Low molecular weight phosphatase family GFO_RS03000 SM00382 ATPases associated with a variety of cellular activities GFO_RS03000 SM00760 Bacterial dnaA protein helix-turn-helix domain GFO_RS03050 SM00278 Helix-hairpin-helix DNA-binding motif class 1 GFO_RS03050 SM00292 breast cancer carboxy-terminal domain GFO_RS03050 SM00532 Ligase N family GFO_RS03080 SM01130 GFO_RS03080 GFO_RS03090 SM01409 GFO_RS03090 GFO_RS03130 SM00387 Histidine kinase-like ATPases GFO_RS03130 SM00388 His Kinase A (phosphoacceptor) domain GFO_RS03135 SM00448 cheY-homologous receiver domain GFO_RS03135 SM00862 Transcriptional regulatory protein, C terminal GFO_RS03160 SM00465 GIY-YIG type nucleases (URI domain) GFO_RS03160 SM00479 GFO_RS03160 GFO_RS03210 SM00530 Helix-turn-helix XRE-family like proteins GFO_RS03235 SM00487 DEAD-like helicases superfamily GFO_RS03275 SM00813 Alpha-L-arabinofuranosidase C-terminus GFO_RS03315 SM01007 Class II Aldolase and Adducin N-terminal domain GFO_RS03345 SM00861 Transketolase, pyrimidine binding domain GFO_RS03355 SM00028 Tetratricopeptide repeats GFO_RS03370 SM00382 ATPases associated with a variety of cellular activities GFO_RS03405 SM00382 ATPases associated with a variety of cellular activities GFO_RS03415 SM00382 ATPases associated with a variety of cellular activities GFO_RS03415 SM00448 cheY-homologous receiver domain GFO_RS03420 SM00387 Histidine kinase-like ATPases GFO_RS03455 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GFO_RS03460 SM00382 ATPases associated with a variety of cellular activities GFO_RS03460 SM00448 cheY-homologous receiver domain GFO_RS03465 SM00387 Histidine kinase-like ATPases GFO_RS03465 SM00388 His Kinase A (phosphoacceptor) domain GFO_RS03505 SM00448 cheY-homologous receiver domain GFO_RS03505 SM00850 LytTr DNA-binding domain GFO_RS03605 SM00829 Enoylreductase GFO_RS03655 SM00028 Tetratricopeptide repeats GFO_RS03680 SM00788 Adenylosuccinate synthetase GFO_RS03690 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. GFO_RS03690 SM00954 Region found in RelA / SpoT proteins GFO_RS03700 SM00967 RNA 2'-O ribose methyltransferase substrate binding GFO_RS03750 SM00562 GFO_RS03750 GFO_RS03785 SM00853 MutL C terminal dimerisation domain GFO_RS03785 SM01340 GFO_RS03785 GFO_RS03825 SM00470 ParB-like nuclease domain GFO_RS03920 SM00448 cheY-homologous receiver domain GFO_RS03920 SM00862 Transcriptional regulatory protein, C terminal GFO_RS03925 SM00388 His Kinase A (phosphoacceptor) domain GFO_RS03955 SM00530 Helix-turn-helix XRE-family like proteins GFO_RS03970 SM00028 Tetratricopeptide repeats GFO_RS04010 SM00448 cheY-homologous receiver domain GFO_RS04010 SM00850 LytTr DNA-binding domain GFO_RS04025 SM00448 cheY-homologous receiver domain GFO_RS04035 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) GFO_RS04035 SM00091 PAS domain GFO_RS04035 SM00387 Histidine kinase-like ATPases GFO_RS04035 SM00388 His Kinase A (phosphoacceptor) domain GFO_RS04035 SM00448 cheY-homologous receiver domain GFO_RS04050 SM01011 Aminopeptidase P, N-terminal domain GFO_RS04165 SM00530 Helix-turn-helix XRE-family like proteins GFO_RS04185 SM00530 Helix-turn-helix XRE-family like proteins GFO_RS04200 SM00507 HNH nucleases GFO_RS04245 SM00530 Helix-turn-helix XRE-family like proteins GFO_RS04265 SM00530 Helix-turn-helix XRE-family like proteins GFO_RS04345 SM00530 Helix-turn-helix XRE-family like proteins GFO_RS04445 SM00530 Helix-turn-helix XRE-family like proteins GFO_RS04490 SM00419 helix_turn_helix, cAMP Regulatory protein GFO_RS04525 SM00822 GFO_RS04525 GFO_RS04550 SM00450 Rhodanese Homology Domain GFO_RS04550 SM00849 Metallo-beta-lactamase superfamily GFO_RS04560 SM00878 Biotin carboxylase C-terminal domain GFO_RS04610 SM00850 LytTr DNA-binding domain GFO_RS04720 SM00563 Phosphate acyltransferases GFO_RS04765 SM00850 LytTr DNA-binding domain GFO_RS04855 SM00046 Diacylglycerol kinase catalytic domain (presumed) GFO_RS04920 SM00347 helix_turn_helix multiple antibiotic resistance protein GFO_RS04930 SM01211 GFO_RS04930 GFO_RS04970 SM00382 ATPases associated with a variety of cellular activities GFO_RS05005 SM00729 Elongator protein 3, MiaB family, Radical SAM GFO_RS05045 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GFO_RS05045 SM01209 GFO_RS05045 GFO_RS05085 SM00382 ATPases associated with a variety of cellular activities GFO_RS05110 SM00245 tail specific protease GFO_RS05170 SM00487 DEAD-like helicases superfamily GFO_RS05170 SM00490 helicase superfamily c-terminal domain GFO_RS05205 SM00487 DEAD-like helicases superfamily GFO_RS05205 SM00490 helicase superfamily c-terminal domain GFO_RS05210 SM00448 cheY-homologous receiver domain GFO_RS05210 SM00850 LytTr DNA-binding domain GFO_RS05315 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor GFO_RS05415 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins GFO_RS05430 SM00345 helix_turn_helix gluconate operon transcriptional repressor GFO_RS05430 SM00895 GFO_RS05430 GFO_RS05440 SM00822 GFO_RS05440 GFO_RS05480 SM01321 GFO_RS05480 GFO_RS05495 SM00727 Heat shock chaperonin-binding motif. GFO_RS05535 SM00822 GFO_RS05535 GFO_RS05560 SM00938 Nitrogen regulatory protein P-II GFO_RS05680 SM00014 Acid phosphatase homologues GFO_RS05690 SM01259 GFO_RS05690 GFO_RS05720 SM00387 Histidine kinase-like ATPases GFO_RS05720 SM00388 His Kinase A (phosphoacceptor) domain GFO_RS05725 SM00448 cheY-homologous receiver domain GFO_RS05725 SM00862 Transcriptional regulatory protein, C terminal GFO_RS05730 SM00014 Acid phosphatase homologues GFO_RS05790 SM00342 helix_turn_helix, arabinose operon control protein GFO_RS05815 SM01235 GFO_RS05815 GFO_RS05845 SM00421 helix_turn_helix, Lux Regulon GFO_RS05905 SM00450 Rhodanese Homology Domain GFO_RS05915 SM00849 Metallo-beta-lactamase superfamily GFO_RS06180 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor GFO_RS06210 SM00342 helix_turn_helix, arabinose operon control protein GFO_RS06225 SM00938 Nitrogen regulatory protein P-II GFO_RS06280 SM00450 Rhodanese Homology Domain GFO_RS06280 SM00849 Metallo-beta-lactamase superfamily GFO_RS06380 SM00646 GFO_RS06380 GFO_RS06430 SM00342 helix_turn_helix, arabinose operon control protein GFO_RS06455 SM00530 Helix-turn-helix XRE-family like proteins GFO_RS06565 SM00382 ATPases associated with a variety of cellular activities GFO_RS06570 SM00710 Parallel beta-helix repeats GFO_RS06570 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses GFO_RS06590 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. GFO_RS06600 SM00729 Elongator protein 3, MiaB family, Radical SAM GFO_RS06605 SM01133 GFO_RS06605 GFO_RS06625 SM00091 PAS domain GFO_RS06625 SM00387 Histidine kinase-like ATPases GFO_RS06625 SM00388 His Kinase A (phosphoacceptor) domain GFO_RS06630 SM00100 Cyclic nucleotide-monophosphate binding domain GFO_RS06630 SM00419 helix_turn_helix, cAMP Regulatory protein GFO_RS06630 SM00448 cheY-homologous receiver domain GFO_RS06665 SM00867 YceI-like domain GFO_RS06745 SM00411 bacterial (prokaryotic) histone like domain GFO_RS06755 SM00487 DEAD-like helicases superfamily GFO_RS06755 SM00490 helicase superfamily c-terminal domain GFO_RS06785 SM00849 Metallo-beta-lactamase superfamily GFO_RS06815 SM00387 Histidine kinase-like ATPases GFO_RS06815 SM00388 His Kinase A (phosphoacceptor) domain GFO_RS06820 SM00387 Histidine kinase-like ATPases GFO_RS06820 SM00388 His Kinase A (phosphoacceptor) domain GFO_RS06830 SM00382 ATPases associated with a variety of cellular activities GFO_RS06930 SM00387 Histidine kinase-like ATPases GFO_RS06930 SM00433 TopoisomeraseII GFO_RS06940 SM00434 DNA Topoisomerase IV GFO_RS06955 SM00530 Helix-turn-helix XRE-family like proteins GFO_RS06965 SM00344 helix_turn_helix ASNC type GFO_RS07005 SM00563 Phosphate acyltransferases GFO_RS07045 SM00382 ATPases associated with a variety of cellular activities GFO_RS07045 SM01086 C-terminal, D2-small domain, of ClpB protein GFO_RS07050 SM00434 DNA Topoisomerase IV GFO_RS07055 SM00028 Tetratricopeptide repeats GFO_RS07070 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. GFO_RS07155 SM00822 GFO_RS07155 GFO_RS07160 SM00822 GFO_RS07160 GFO_RS07165 SM00829 Enoylreductase GFO_RS07195 SM00419 helix_turn_helix, cAMP Regulatory protein GFO_RS07200 SM00487 DEAD-like helicases superfamily GFO_RS07200 SM00490 helicase superfamily c-terminal domain GFO_RS07260 SM00062 Bacterial periplasmic substrate-binding proteins GFO_RS07385 SM00829 Enoylreductase GFO_RS07390 SM00357 Cold shock protein domain GFO_RS07400 SM00357 Cold shock protein domain GFO_RS07405 SM00357 Cold shock protein domain GFO_RS07410 SM00357 Cold shock protein domain GFO_RS07540 SM00825 Beta-ketoacyl synthase GFO_RS07585 SM00861 Transketolase, pyrimidine binding domain GFO_RS07620 SM00986 Uracil DNA glycosylase superfamily GFO_RS07620 SM00987 UreE urease accessory protein, C-terminal domain GFO_RS07625 SM00533 DNA-binding domain of DNA mismatch repair MUTS family GFO_RS07625 SM00534 ATPase domain of DNA mismatch repair MUTS family GFO_RS07645 SM00448 cheY-homologous receiver domain GFO_RS07650 SM00091 PAS domain GFO_RS07650 SM00387 Histidine kinase-like ATPases GFO_RS07650 SM00388 His Kinase A (phosphoacceptor) domain GFO_RS07695 SM00646 GFO_RS07695 GFO_RS07710 SM00851 MGS-like domain GFO_RS07800 SM00825 Beta-ketoacyl synthase GFO_RS07835 SM00822 GFO_RS07835 GFO_RS07875 SM00342 helix_turn_helix, arabinose operon control protein GFO_RS07880 SM00342 helix_turn_helix, arabinose operon control protein GFO_RS07905 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) GFO_RS07905 SM00091 PAS domain GFO_RS07905 SM00138 Methyltransferase, chemotaxis proteins GFO_RS07905 SM00387 Histidine kinase-like ATPases GFO_RS07905 SM00388 His Kinase A (phosphoacceptor) domain GFO_RS07910 SM00448 cheY-homologous receiver domain GFO_RS07915 SM00448 cheY-homologous receiver domain GFO_RS07950 SM01259 GFO_RS07950 GFO_RS07965 SM00342 helix_turn_helix, arabinose operon control protein GFO_RS07965 SM00387 Histidine kinase-like ATPases GFO_RS07965 SM00388 His Kinase A (phosphoacceptor) domain GFO_RS07965 SM00448 cheY-homologous receiver domain GFO_RS07975 SM01038 Beta galactosidase small chain GFO_RS08005 SM00858 GFO_RS08005 GFO_RS08025 SM00812 Alpha-L-fucosidase GFO_RS08040 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins GFO_RS08060 SM00829 Enoylreductase GFO_RS08110 SM01150 GFO_RS08110 GFO_RS08130 SM00421 helix_turn_helix, Lux Regulon GFO_RS08145 SM01038 Beta galactosidase small chain GFO_RS08155 SM01154 GFO_RS08155 GFO_RS08185 SM00341 Helicase and RNase D C-terminal GFO_RS08185 SM00487 DEAD-like helicases superfamily GFO_RS08185 SM00490 helicase superfamily c-terminal domain GFO_RS08185 SM00956 GFO_RS08185 GFO_RS08200 SM00871 Bacterial transcription activator, effector binding domain GFO_RS08230 SM01022 GFO_RS08230 GFO_RS08275 SM00244 prohibitin homologues GFO_RS08285 SM00822 GFO_RS08285 GFO_RS08290 SM00881 CoA binding domain GFO_RS08315 SM00841 Elongation factor P, C-terminal GFO_RS08315 SM01185 GFO_RS08315 GFO_RS08335 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. GFO_RS08340 SM00448 cheY-homologous receiver domain GFO_RS08355 SM01002 Alanine dehydrogenase/PNT, C-terminal domain GFO_RS08355 SM01003 Alanine dehydrogenase/PNT, N-terminal domain GFO_RS08370 SM00478 endonuclease III GFO_RS08455 SM00937 GFO_RS08455 GFO_RS08550 SM00822 GFO_RS08550 GFO_RS08595 SM00382 ATPases associated with a variety of cellular activities GFO_RS08615 SM00855 Phosphoglycerate mutase family GFO_RS08640 SM00245 tail specific protease GFO_RS08685 SM00316 Ribosomal protein S1-like RNA-binding domain GFO_RS08700 SM00382 ATPases associated with a variety of cellular activities GFO_RS08700 SM00464 Found in ATP-dependent protease La (LON) GFO_RS08800 SM00322 K homology RNA-binding domain GFO_RS08800 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. GFO_RS08875 SM00981 GFO_RS08875 GFO_RS08940 SM00100 Cyclic nucleotide-monophosphate binding domain GFO_RS08940 SM00116 Domain in cystathionine beta-synthase and other proteins. GFO_RS08945 SM00479 GFO_RS08945 GFO_RS08990 SM00480 DNA polymerase III beta subunit GFO_RS09000 SM00173 Ras subfamily of RAS small GTPases GFO_RS09000 SM00382 ATPases associated with a variety of cellular activities GFO_RS09045 SM00342 helix_turn_helix, arabinose operon control protein GFO_RS09060 SM00347 helix_turn_helix multiple antibiotic resistance protein GFO_RS09065 SM00829 Enoylreductase GFO_RS09135 SM00704 CDGSH-type zinc finger. Function unknown. GFO_RS09155 SM00382 ATPases associated with a variety of cellular activities GFO_RS09165 SM00342 helix_turn_helix, arabinose operon control protein GFO_RS09195 SM00448 cheY-homologous receiver domain GFO_RS09200 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. GFO_RS09200 SM00387 Histidine kinase-like ATPases GFO_RS09200 SM00388 His Kinase A (phosphoacceptor) domain GFO_RS09205 SM00091 PAS domain GFO_RS09205 SM00138 Methyltransferase, chemotaxis proteins GFO_RS09205 SM00387 Histidine kinase-like ATPases GFO_RS09205 SM00388 His Kinase A (phosphoacceptor) domain GFO_RS09265 SM00271 DnaJ molecular chaperone homology domain GFO_RS09295 SM00448 cheY-homologous receiver domain GFO_RS09300 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) GFO_RS09300 SM00091 PAS domain GFO_RS09470 SM00858 GFO_RS09470 GFO_RS09535 SM00382 ATPases associated with a variety of cellular activities GFO_RS09580 SM00984 UDP binding domain GFO_RS09585 SM00984 UDP binding domain GFO_RS09600 SM00354 helix_turn _helix lactose operon repressor GFO_RS09630 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. GFO_RS09670 SM00235 Zinc-dependent metalloprotease GFO_RS09675 SM00235 Zinc-dependent metalloprotease GFO_RS09700 SM00421 helix_turn_helix, Lux Regulon GFO_RS09705 SM00382 ATPases associated with a variety of cellular activities GFO_RS09720 SM00861 Transketolase, pyrimidine binding domain GFO_RS09805 SM00829 Enoylreductase GFO_RS09865 SM01329 GFO_RS09865 GFO_RS09905 SM00859 Semialdehyde dehydrogenase, NAD binding domain GFO_RS09950 SM00421 helix_turn_helix, Lux Regulon GFO_RS09950 SM00448 cheY-homologous receiver domain GFO_RS09955 SM00387 Histidine kinase-like ATPases GFO_RS09970 SM00797 Allophanate hydrolase subunit 2 GFO_RS09975 SM00796 Allophanate hydrolase subunit 1 GFO_RS10000 SM00382 ATPases associated with a variety of cellular activities GFO_RS10005 SM00387 Histidine kinase-like ATPases GFO_RS10005 SM00388 His Kinase A (phosphoacceptor) domain GFO_RS10015 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GFO_RS10025 SM00642 Alpha-amylase domain GFO_RS10030 SM00642 Alpha-amylase domain GFO_RS10050 SM00354 helix_turn _helix lactose operon repressor GFO_RS10070 SM00642 Alpha-amylase domain GFO_RS10105 SM00354 helix_turn _helix lactose operon repressor GFO_RS10125 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain GFO_RS10130 SM00977 TilS substrate C-terminal domain GFO_RS10150 SM00487 DEAD-like helicases superfamily GFO_RS10150 SM00490 helicase superfamily c-terminal domain GFO_RS10175 SM00448 cheY-homologous receiver domain GFO_RS10175 SM00850 LytTr DNA-binding domain GFO_RS10225 SM00344 helix_turn_helix ASNC type GFO_RS10270 SM00843 GFO_RS10270 GFO_RS10335 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor GFO_RS10345 SM00226 Low molecular weight phosphatase family GFO_RS10430 SM00448 cheY-homologous receiver domain GFO_RS10485 SM00257 Lysin motif GFO_RS10515 SM00631 GFO_RS10515 GFO_RS10540 SM00729 Elongator protein 3, MiaB family, Radical SAM GFO_RS10555 SM00382 ATPases associated with a variety of cellular activities GFO_RS10555 SM00962 SRP54-type protein, GTPase domain GFO_RS10555 SM00963 SRP54-type protein, helical bundle domain GFO_RS10570 SM00852 Probable molybdopterin binding domain GFO_RS10585 SM00479 GFO_RS10585 GFO_RS10595 SM00493 GFO_RS10595 GFO_RS10615 SM00382 ATPases associated with a variety of cellular activities GFO_RS10660 SM00382 ATPases associated with a variety of cellular activities GFO_RS10660 SM01086 C-terminal, D2-small domain, of ClpB protein GFO_RS10675 SM00855 Phosphoglycerate mutase family GFO_RS10705 SM00732 Likely ribonuclease with RNase H fold. GFO_RS10775 SM00382 ATPases associated with a variety of cellular activities GFO_RS10790 SM00487 DEAD-like helicases superfamily GFO_RS10790 SM00490 helicase superfamily c-terminal domain GFO_RS10815 SM00382 ATPases associated with a variety of cellular activities GFO_RS10880 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain GFO_RS10890 SM00849 Metallo-beta-lactamase superfamily GFO_RS10985 SM00487 DEAD-like helicases superfamily GFO_RS10985 SM00490 helicase superfamily c-terminal domain GFO_RS10995 SM00873 B3/4 domain GFO_RS10995 SM00874 tRNA synthetase B5 domain GFO_RS10995 SM00896 Ferredoxin-fold anticodon binding domain GFO_RS11005 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. GFO_RS11055 SM00028 Tetratricopeptide repeats GFO_RS11055 SM00387 Histidine kinase-like ATPases GFO_RS11055 SM00388 His Kinase A (phosphoacceptor) domain GFO_RS11055 SM00448 cheY-homologous receiver domain GFO_RS11075 SM00244 prohibitin homologues GFO_RS11170 SM00663 RNA polymerase I subunit A N-terminus GFO_RS11195 SM00649 Ribosomal protein L11/L12 GFO_RS11200 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. GFO_RS11200 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. GFO_RS11255 SM00849 Metallo-beta-lactamase superfamily GFO_RS11335 SM00363 S4 RNA-binding domain GFO_RS11375 SM00530 Helix-turn-helix XRE-family like proteins GFO_RS11415 SM00060 Fibronectin type 3 domain GFO_RS11770 SM00422 helix_turn_helix, mercury resistance GFO_RS11830 SM00935 Outer membrane protein (OmpH-like) GFO_RS11835 SM00116 Domain in cystathionine beta-synthase and other proteins. GFO_RS11835 SM01240 GFO_RS11835 GFO_RS11850 SM00752 Horizontally Transferred TransMembrane Domain GFO_RS11895 SM01323 GFO_RS11895 GFO_RS11910 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GFO_RS11915 SM00382 ATPases associated with a variety of cellular activities GFO_RS11920 SM00712 DNA/RNA-binding repeats in PUR-alpha/beta/gamma and in hypothetical proteins from spirochetes and the Bacteroides-Cytophaga-Flexibacter bacteria. GFO_RS11985 SM00028 Tetratricopeptide repeats GFO_RS11985 SM00671 Sel1-like repeats. GFO_RS11990 SM00382 ATPases associated with a variety of cellular activities GFO_RS12005 SM00838 Elongation factor G C-terminus GFO_RS12100 SM01003 Alanine dehydrogenase/PNT, N-terminal domain GFO_RS12140 SM00382 ATPases associated with a variety of cellular activities GFO_RS12195 SM00487 DEAD-like helicases superfamily GFO_RS12280 SM00271 DnaJ molecular chaperone homology domain GFO_RS12285 SM00318 Staphylococcal nuclease homologues GFO_RS12375 SM00448 cheY-homologous receiver domain GFO_RS12375 SM00850 LytTr DNA-binding domain GFO_RS12415 SM00028 Tetratricopeptide repeats GFO_RS12415 SM00387 Histidine kinase-like ATPases GFO_RS12420 SM00421 helix_turn_helix, Lux Regulon GFO_RS12420 SM00448 cheY-homologous receiver domain GFO_RS12425 SM00382 ATPases associated with a variety of cellular activities GFO_RS12450 SM00530 Helix-turn-helix XRE-family like proteins GFO_RS12460 SM00448 cheY-homologous receiver domain GFO_RS12460 SM00850 LytTr DNA-binding domain GFO_RS12495 SM01060 GFO_RS12495 GFO_RS12500 SM00327 von Willebrand factor (vWF) type A domain GFO_RS12505 SM00465 GIY-YIG type nucleases (URI domain) GFO_RS12505 SM00479 GFO_RS12505 GFO_RS12515 SM00487 DEAD-like helicases superfamily GFO_RS12515 SM00490 helicase superfamily c-terminal domain GFO_RS12545 SM00450 Rhodanese Homology Domain GFO_RS12550 SM00347 helix_turn_helix multiple antibiotic resistance protein GFO_RS12560 SM00867 YceI-like domain GFO_RS12605 SM00878 Biotin carboxylase C-terminal domain GFO_RS12615 SM00953 GFO_RS12615 GFO_RS12625 SM00363 S4 RNA-binding domain GFO_RS12685 SM00382 ATPases associated with a variety of cellular activities GFO_RS12710 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. GFO_RS12730 SM00729 Elongator protein 3, MiaB family, Radical SAM GFO_RS12735 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GFO_RS12740 SM00028 Tetratricopeptide repeats GFO_RS12740 SM00387 Histidine kinase-like ATPases GFO_RS12740 SM00388 His Kinase A (phosphoacceptor) domain GFO_RS12740 SM00448 cheY-homologous receiver domain GFO_RS12820 SM00014 Acid phosphatase homologues GFO_RS12880 SM00946 Prolyl-tRNA synthetase, C-terminal GFO_RS12915 SM00840 GFO_RS12915 GFO_RS12950 SM00387 Histidine kinase-like ATPases GFO_RS12950 SM00433 TopoisomeraseII GFO_RS12975 SM00644 GFO_RS12975 GFO_RS13025 SM00864 Tubulin/FtsZ family, GTPase domain GFO_RS13025 SM00865 Tubulin/FtsZ family, C-terminal domain GFO_RS13030 SM00842 Cell division protein FtsA GFO_RS13070 SM00740 GFO_RS13070 GFO_RS13125 SM00421 helix_turn_helix, Lux Regulon GFO_RS13125 SM00448 cheY-homologous receiver domain GFO_RS13130 SM00400 zinc finger GFO_RS13130 SM00493 GFO_RS13130 GFO_RS13150 SM00363 S4 RNA-binding domain GFO_RS13180 SM00382 ATPases associated with a variety of cellular activities GFO_RS13180 SM00962 SRP54-type protein, GTPase domain GFO_RS13180 SM00963 SRP54-type protein, helical bundle domain GFO_RS13185 SM00836 DALR anticodon binding domain GFO_RS13185 SM01016 Arginyl tRNA synthetase N terminal dom GFO_RS13235 SM01192 GFO_RS13235 GFO_RS13235 SM01193 GFO_RS13235 GFO_RS13250 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain GFO_RS13260 SM00662 RNA polymerases D GFO_RS13265 SM00363 S4 RNA-binding domain GFO_RS13265 SM01390 GFO_RS13265 GFO_RS13330 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. GFO_RS13335 SM01374 GFO_RS13335 GFO_RS13355 SM00322 K homology RNA-binding domain GFO_RS13370 SM01382 GFO_RS13370 GFO_RS13370 SM01383 GFO_RS13370 GFO_RS13390 SM01403 GFO_RS13390 GFO_RS13395 SM00838 Elongation factor G C-terminus GFO_RS13395 SM00889 Elongation factor G, domain IV GFO_RS13445 SM00967 RNA 2'-O ribose methyltransferase substrate binding GFO_RS13455 SM00382 ATPases associated with a variety of cellular activities GFO_RS13495 SM00028 Tetratricopeptide repeats GFO_RS13535 SM01001 AIR carboxylase GFO_RS13575 SM00191 Integrin alpha (beta-propellor repeats). GFO_RS13595 SM00382 ATPases associated with a variety of cellular activities GFO_RS13695 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GFO_RS13865 SM00342 helix_turn_helix, arabinose operon control protein GFO_RS13900 SM00342 helix_turn_helix, arabinose operon control protein GFO_RS13955 SM00798 AICARFT/IMPCHase bienzyme GFO_RS13955 SM00851 MGS-like domain GFO_RS13960 SM00268 Actin GFO_RS13985 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. GFO_RS13985 SM00245 tail specific protease GFO_RS14050 SM01091 Transporter associated domain GFO_RS14060 SM00028 Tetratricopeptide repeats GFO_RS14125 SM00642 Alpha-amylase domain GFO_RS14135 SM00342 helix_turn_helix, arabinose operon control protein GFO_RS14135 SM00448 cheY-homologous receiver domain GFO_RS14140 SM01133 GFO_RS14140 GFO_RS14190 SM00382 ATPases associated with a variety of cellular activities GFO_RS14230 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain GFO_RS14230 SM00437 Bacterial DNA topoisomerase I DNA-binding domain GFO_RS14230 SM00493 GFO_RS14230 GFO_RS14275 SM00479 GFO_RS14275 GFO_RS14275 SM00481 DNA polymerase alpha chain like domain GFO_RS14350 SM00903 Flavin reductase like domain GFO_RS14355 SM00387 Histidine kinase-like ATPases GFO_RS14355 SM00388 His Kinase A (phosphoacceptor) domain GFO_RS14385 SM00387 Histidine kinase-like ATPases GFO_RS14385 SM00388 His Kinase A (phosphoacceptor) domain GFO_RS14385 SM00448 cheY-homologous receiver domain GFO_RS14390 SM00382 ATPases associated with a variety of cellular activities GFO_RS14390 SM00448 cheY-homologous receiver domain GFO_RS14440 SM00996 S-adenosyl-L-homocysteine hydrolase GFO_RS14440 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain GFO_RS14445 SM00886 Stress responsive A/B Barrel Domain GFO_RS14490 SM00481 DNA polymerase alpha chain like domain GFO_RS14510 SM00861 Transketolase, pyrimidine binding domain GFO_RS14560 SM00357 Cold shock protein domain GFO_RS14660 SM00116 Domain in cystathionine beta-synthase and other proteins. GFO_RS14740 SM00382 ATPases associated with a variety of cellular activities GFO_RS14790 SM01011 Aminopeptidase P, N-terminal domain GFO_RS14805 SM00271 DnaJ molecular chaperone homology domain GFO_RS14870 SM00487 DEAD-like helicases superfamily GFO_RS14870 SM00490 helicase superfamily c-terminal domain GFO_RS14870 SM00982 GFO_RS14870 GFO_RS14870 SM01058 CarD-like/TRCF domain GFO_RS14940 SM00465 GIY-YIG type nucleases (URI domain) GFO_RS14965 SM00387 Histidine kinase-like ATPases GFO_RS14970 SM00448 cheY-homologous receiver domain GFO_RS15005 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GFO_RS15075 SM00899 GFO_RS15075 GFO_RS15095 SM00529 Helix-turn-helix diphteria tox regulatory element GFO_RS15110 SM00271 DnaJ molecular chaperone homology domain GFO_RS15120 SM00563 Phosphate acyltransferases GFO_RS15125 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. GFO_RS15135 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain GFO_RS15135 SM01232 GFO_RS15135 GFO_RS15140 SM00729 Elongator protein 3, MiaB family, Radical SAM GFO_RS15150 SM00387 Histidine kinase-like ATPases GFO_RS15150 SM00388 His Kinase A (phosphoacceptor) domain GFO_RS15180 SM00342 helix_turn_helix, arabinose operon control protein GFO_RS15220 SM01004 Delta-aminolevulinic acid dehydratase GFO_RS15260 SM00882 Coenzyme A transferase GFO_RS15270 SM00882 Coenzyme A transferase GFO_RS15290 SM00450 Rhodanese Homology Domain GFO_RS15295 SM00382 ATPases associated with a variety of cellular activities GFO_RS15315 SM00563 Phosphate acyltransferases GFO_RS15360 SM00028 Tetratricopeptide repeats GFO_RS15435 SM00028 Tetratricopeptide repeats GFO_RS15440 SM00382 ATPases associated with a variety of cellular activities GFO_RS15475 SM01209 GFO_RS15475 GFO_RS15475 SM01210 GFO_RS15475 GFO_RS15530 SM00257 Lysin motif GFO_RS15550 SM00935 Outer membrane protein (OmpH-like) GFO_RS15560 SM01228 GFO_RS15560 GFO_RS15580 SM00244 prohibitin homologues GFO_RS15610 SM00905 Dihydroneopterin aldolase GFO_RS15625 SM00316 Ribosomal protein S1-like RNA-binding domain GFO_RS15625 SM00357 Cold shock protein domain GFO_RS15625 SM00955 GFO_RS15625 GFO_RS15645 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. GFO_RS15645 SM00245 tail specific protease GFO_RS15665 SM00849 Metallo-beta-lactamase superfamily GFO_RS15705 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain GFO_RS15710 SM00287 Bacterial SH3 domain homologues GFO_RS15780 SM00878 Biotin carboxylase C-terminal domain GFO_RS15800 SM00382 ATPases associated with a variety of cellular activities GFO_RS15810 SM00859 Semialdehyde dehydrogenase, NAD binding domain GFO_RS15820 SM01005 Alanine racemase, C-terminal domain GFO_RS15840 SM00986 Uracil DNA glycosylase superfamily GFO_RS15840 SM00987 UreE urease accessory protein, C-terminal domain GFO_RS15870 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. GFO_RS15955 SM00825 Beta-ketoacyl synthase GFO_RS15960 SM00358 Double-stranded RNA binding motif GFO_RS15960 SM00535 Ribonuclease III family GFO_RS15990 SM01118 GFO_RS15990 GFO_RS16010 SM00014 Acid phosphatase homologues GFO_RS16100 SM00327 von Willebrand factor (vWF) type A domain GFO_RS16105 SM00327 von Willebrand factor (vWF) type A domain GFO_RS16110 SM00028 Tetratricopeptide repeats GFO_RS16120 SM00028 Tetratricopeptide repeats GFO_RS16120 SM00287 Bacterial SH3 domain homologues GFO_RS16135 SM00947 Carbonic anhydrase GFO_RS16180 SM00257 Lysin motif GFO_RS16190 SM00072 Guanylate kinase homologues. GFO_RS16305 SM00014 Acid phosphatase homologues GFO_RS16310 SM00448 cheY-homologous receiver domain GFO_RS16310 SM00850 LytTr DNA-binding domain GFO_RS16340 SM00421 helix_turn_helix, Lux Regulon GFO_RS16365 SM01217 GFO_RS16365 GFO_RS16380 SM00861 Transketolase, pyrimidine binding domain GFO_RS16390 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. GFO_RS16445 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. GFO_RS16445 SM00245 tail specific protease GFO_RS16460 SM00421 helix_turn_helix, Lux Regulon GFO_RS16510 SM01400 GFO_RS16510 GFO_RS16530 SM00904 Riboflavin kinase GFO_RS16535 SM00752 Horizontally Transferred TransMembrane Domain GFO_RS16545 SM00028 Tetratricopeptide repeats GFO_RS16555 SM00650 Ribosomal RNA adenine dimethylases GFO_RS16560 SM00116 Domain in cystathionine beta-synthase and other proteins. GFO_RS16560 SM00924 MgtE intracellular N domain GFO_RS16585 SM00563 Phosphate acyltransferases GFO_RS16635 SM00487 DEAD-like helicases superfamily GFO_RS16635 SM00490 helicase superfamily c-terminal domain GFO_RS16695 SM00382 ATPases associated with a variety of cellular activities GFO_RS16735 SM00382 ATPases associated with a variety of cellular activities GFO_RS16745 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. GFO_RS16750 SM00530 Helix-turn-helix XRE-family like proteins GFO_RS16820 SM00825 Beta-ketoacyl synthase GFO_RS16825 SM00729 Elongator protein 3, MiaB family, Radical SAM GFO_RS16825 SM00876 Biotin and Thiamin Synthesis associated domain GFO_RS16830 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. GFO_RS16835 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. GFO_RS16855 SM00316 Ribosomal protein S1-like RNA-binding domain GFO_RS16860 SM00411 bacterial (prokaryotic) histone like domain GFO_RS16865 SM00478 endonuclease III GFO_RS16865 SM00525 GFO_RS16865 GFO_RS16875 SM00116 Domain in cystathionine beta-synthase and other proteins. GFO_RS16875 SM01091 Transporter associated domain GFO_RS16915 SM00959 Rho termination factor, N-terminal domain GFO_RS16935 SM00729 Elongator protein 3, MiaB family, Radical SAM GFO_RS16940 SM00382 ATPases associated with a variety of cellular activities GFO_RS16960 SM00883 Chaperonin 10 Kd subunit GFO_RS16980 SM00342 helix_turn_helix, arabinose operon control protein GFO_RS17025 SM00450 Rhodanese Homology Domain GFO_RS17090 SM01259 GFO_RS17090 GFO_RS17115 SM00363 S4 RNA-binding domain GFO_RS17200 SM01018 B12 binding domain GFO_RS17310 SM00507 HNH nucleases GFO_RS17340 SM00421 helix_turn_helix, Lux Regulon GFO_RS17350 SM00271 DnaJ molecular chaperone homology domain GFO_RS17355 SM00387 Histidine kinase-like ATPases GFO_RS17380 SM01126 GFO_RS17380