locus-tag class description YC6258_RS00035 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) YC6258_RS00040 PF04012 PspA/IM30 family YC6258_RS00055 PF03994 Domain of Unknown Function (DUF350) YC6258_RS00065 PF03738 Glutathionylspermidine synthase preATP-grasp YC6258_RS00075 PF01112 Asparaginase YC6258_RS00080 PF01134 Glucose inhibited division protein A YC6258_RS00080 PF13932 GidA associated domain YC6258_RS00085 PF02527 rRNA small subunit methyltransferase G YC6258_RS00090 PF13614 AAA domain YC6258_RS00095 PF02195 ParB-like nuclease domain YC6258_RS00095 PF17762 HTH domain found in ParB protein YC6258_RS00110 PF00155 Aminotransferase class I and II YC6258_RS00115 PF08240 Alcohol dehydrogenase GroES-like domain YC6258_RS00115 PF00107 Zinc-binding dehydrogenase YC6258_RS00120 PF04237 YjbR YC6258_RS00130 PF12704 MacB-like periplasmic core domain YC6258_RS00130 PF02687 FtsX-like permease family YC6258_RS00130 PF00005 ABC transporter YC6258_RS00140 PF02687 FtsX-like permease family YC6258_RS00140 PF12704 MacB-like periplasmic core domain YC6258_RS00140 PF00005 ABC transporter YC6258_RS00220 PF00171 Aldehyde dehydrogenase family YC6258_RS00230 PF13280 WYL domain YC6258_RS00230 PF08279 HTH domain YC6258_RS00250 PF01341 Glycosyl hydrolases family 6 YC6258_RS00250 PF00041 Fibronectin type III domain YC6258_RS00250 PF00553 Cellulose binding domain YC6258_RS00255 PF03831 PhnA domain YC6258_RS00255 PF08274 PhnA Zinc-Ribbon YC6258_RS00260 PF07519 Tannase and feruloyl esterase YC6258_RS00265 PF01568 Molydopterin dinucleotide binding domain YC6258_RS00265 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YC6258_RS00265 PF00384 Molybdopterin oxidoreductase YC6258_RS00270 PF06738 Putative threonine/serine exporter YC6258_RS00275 PF12821 Threonine/Serine exporter, ThrE YC6258_RS00285 PF07130 YebG protein YC6258_RS00290 PF18370 Rhamnogalacturonan I lyases beta-sheet domain YC6258_RS00310 PF01979 Amidohydrolase family YC6258_RS00315 PF00576 HIUase/Transthyretin family YC6258_RS00330 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YC6258_RS00330 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase YC6258_RS00335 PF00111 2Fe-2S iron-sulfur cluster binding domain YC6258_RS00335 PF01799 [2Fe-2S] binding domain YC6258_RS00370 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS00370 PF08448 PAS fold YC6258_RS00380 PF01113 Dihydrodipicolinate reductase, N-terminus YC6258_RS00380 PF05173 Dihydrodipicolinate reductase, C-terminus YC6258_RS00385 PF03725 3' exoribonuclease family, domain 2 YC6258_RS00385 PF01138 3' exoribonuclease family, domain 1 YC6258_RS00390 PF08340 Domain of unknown function (DUF1732) YC6258_RS00390 PF03755 YicC-like family, N-terminal region YC6258_RS00395 PF18766 SWI2/SNF2 ATPase YC6258_RS00395 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) YC6258_RS00395 PF11867 Domain of unknown function (DUF3387) YC6258_RS00405 PF02384 N-6 DNA Methylase YC6258_RS00405 PF12161 HsdM N-terminal domain YC6258_RS00410 PF02384 N-6 DNA Methylase YC6258_RS00445 PF07728 AAA domain (dynein-related subfamily) YC6258_RS00445 PF17863 AAA lid domain YC6258_RS00445 PF13519 von Willebrand factor type A domain YC6258_RS00450 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain YC6258_RS00450 PF07685 CobB/CobQ-like glutamine amidotransferase domain YC6258_RS00455 PF13386 Cytochrome C biogenesis protein transmembrane region YC6258_RS00460 PF01888 CbiD YC6258_RS00465 PF02571 Precorrin-6x reductase CbiJ/CobK YC6258_RS00470 PF01903 CbiX YC6258_RS00475 PF02570 Precorrin-8X methylmutase YC6258_RS00480 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YC6258_RS00485 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YC6258_RS00490 PF01890 Cobalamin synthesis G C-terminus YC6258_RS00490 PF11761 Cobalamin biosynthesis central region YC6258_RS00490 PF11760 Cobalamin synthesis G N-terminal YC6258_RS00495 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YC6258_RS00500 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YC6258_RS00505 PF02492 CobW/HypB/UreG, nucleotide-binding domain YC6258_RS00505 PF07683 Cobalamin synthesis protein cobW C-terminal domain YC6258_RS00510 PF02514 CobN/Magnesium Chelatase YC6258_RS00530 PF02927 Cellulase N-terminal ig-like domain YC6258_RS00530 PF02018 Carbohydrate binding domain YC6258_RS00530 PF00759 Glycosyl hydrolase family 9 YC6258_RS00540 PF03466 LysR substrate binding domain YC6258_RS00540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS00545 PF08267 Cobalamin-independent synthase, N-terminal domain YC6258_RS00545 PF01717 Cobalamin-independent synthase, Catalytic domain YC6258_RS00550 PF13193 AMP-binding enzyme C-terminal domain YC6258_RS00550 PF00501 AMP-binding enzyme YC6258_RS00560 PF00710 Asparaginase, N-terminal YC6258_RS00560 PF17763 Glutaminase/Asparaginase C-terminal domain YC6258_RS00565 PF10415 Fumarase C C-terminus YC6258_RS00565 PF00206 Lyase YC6258_RS00570 PF01235 Sodium:alanine symporter family YC6258_RS00580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YC6258_RS00585 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS00590 PF12911 N-terminal TM domain of oligopeptide transport permease C YC6258_RS00590 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS00595 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YC6258_RS00595 PF00005 ABC transporter YC6258_RS00655 PF00625 Guanylate kinase YC6258_RS00660 PF01192 RNA polymerase Rpb6 YC6258_RS00665 PF13291 ACT domain YC6258_RS00665 PF04607 Region found in RelA / SpoT proteins YC6258_RS00665 PF02824 TGS domain YC6258_RS00670 PF17284 Spermidine synthase tetramerisation domain YC6258_RS00675 PF06965 Na+/H+ antiporter 1 YC6258_RS00675 PF13462 Thioredoxin YC6258_RS00680 PF00543 Nitrogen regulatory protein P-II YC6258_RS00685 PF00909 Ammonium Transporter Family YC6258_RS00690 PF00543 Nitrogen regulatory protein P-II YC6258_RS00695 PF04380 Membrane fusogenic activity YC6258_RS00715 PF11944 Protein of unknown function (DUF3461) YC6258_RS00720 PF03061 Thioesterase superfamily YC6258_RS00730 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS00735 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS00740 PF00005 ABC transporter YC6258_RS00745 PF01895 PhoU domain YC6258_RS00755 PF00589 Phage integrase family YC6258_RS00845 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain YC6258_RS00845 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain YC6258_RS00850 PF00977 Histidine biosynthesis protein YC6258_RS00855 PF00977 Histidine biosynthesis protein YC6258_RS00860 PF00117 Glutamine amidotransferase class-I YC6258_RS00865 PF00475 Imidazoleglycerol-phosphate dehydratase YC6258_RS00875 PF00989 PAS fold YC6258_RS00875 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS00875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS00880 PF02954 Bacterial regulatory protein, Fis family YC6258_RS00880 PF00072 Response regulator receiver domain YC6258_RS00880 PF00158 Sigma-54 interaction domain YC6258_RS00885 PF00583 Acetyltransferase (GNAT) family YC6258_RS00895 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS00900 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS00905 PF00232 Glycosyl hydrolase family 1 YC6258_RS00910 PF01814 Hemerythrin HHE cation binding domain YC6258_RS00915 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase YC6258_RS00915 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YC6258_RS00920 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS00920 PF00072 Response regulator receiver domain YC6258_RS00920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS00920 PF00989 PAS fold YC6258_RS00920 PF01627 Hpt domain YC6258_RS00920 PF18415 Histidine kinase receptor ArcB trans-membrane domain YC6258_RS00925 PF00571 CBS domain YC6258_RS00925 PF01769 Divalent cation transporter YC6258_RS00925 PF03448 MgtE intracellular N domain YC6258_RS00935 PF13335 Magnesium chelatase, subunit ChlI C-terminal YC6258_RS00935 PF01078 Magnesium chelatase, subunit ChlI YC6258_RS00945 PF02082 Transcriptional regulator YC6258_RS00970 PF03527 RHS protein YC6258_RS00990 PF00145 C-5 cytosine-specific DNA methylase YC6258_RS01015 PF18255 DNA processing protein A sterile alpha motif domain YC6258_RS01015 PF02481 DNA recombination-mediator protein A YC6258_RS01040 PF00145 C-5 cytosine-specific DNA methylase YC6258_RS01050 PF04221 RelB antitoxin YC6258_RS01085 PF04231 Endonuclease I YC6258_RS01145 PF13335 Magnesium chelatase, subunit ChlI C-terminal YC6258_RS01145 PF01078 Magnesium chelatase, subunit ChlI YC6258_RS01155 PF00873 AcrB/AcrD/AcrF family YC6258_RS01160 PF00553 Cellulose binding domain YC6258_RS01160 PF00041 Fibronectin type III domain YC6258_RS01160 PF00759 Glycosyl hydrolase family 9 YC6258_RS01160 PF00942 Cellulose binding domain YC6258_RS01180 PF09278 MerR, DNA binding YC6258_RS01180 PF00376 MerR family regulatory protein YC6258_RS01185 PF00403 Heavy-metal-associated domain YC6258_RS01190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS01190 PF00672 HAMP domain YC6258_RS01190 PF02743 Cache domain YC6258_RS01210 PF07690 Major Facilitator Superfamily YC6258_RS01215 PF01053 Cys/Met metabolism PLP-dependent enzyme YC6258_RS01220 PF01965 DJ-1/PfpI family YC6258_RS01225 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) YC6258_RS01235 PF00005 ABC transporter YC6258_RS01240 PF02361 Cobalt transport protein YC6258_RS01245 PF02632 BioY family YC6258_RS01265 PF00459 Inositol monophosphatase family YC6258_RS01270 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain YC6258_RS01270 PF00117 Glutamine amidotransferase class-I YC6258_RS01275 PF02142 MGS-like domain YC6258_RS01275 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain YC6258_RS01275 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain YC6258_RS01280 PF01272 Transcription elongation factor, GreA/GreB, C-term YC6258_RS01280 PF03449 Transcription elongation factor, N-terminal YC6258_RS01285 PF12833 Helix-turn-helix domain YC6258_RS01285 PF07883 Cupin domain YC6258_RS01305 PF02566 OsmC-like protein YC6258_RS01310 PF01047 MarR family YC6258_RS01315 PF01638 HxlR-like helix-turn-helix YC6258_RS01320 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS01325 PF00497 Bacterial extracellular solute-binding proteins, family 3 YC6258_RS01330 PF03466 LysR substrate binding domain YC6258_RS01330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS01335 PF00171 Aldehyde dehydrogenase family YC6258_RS01340 PF00202 Aminotransferase class-III YC6258_RS01345 PF00672 HAMP domain YC6258_RS01345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS01355 PF00248 Aldo/keto reductase family YC6258_RS01360 PF00248 Aldo/keto reductase family YC6258_RS01365 PF07690 Major Facilitator Superfamily YC6258_RS01370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS01370 PF00672 HAMP domain YC6258_RS01370 PF02743 Cache domain YC6258_RS01375 PF01915 Glycosyl hydrolase family 3 C-terminal domain YC6258_RS01375 PF14310 Fibronectin type III-like domain YC6258_RS01375 PF00933 Glycosyl hydrolase family 3 N terminal domain YC6258_RS01385 PF02653 Branched-chain amino acid transport system / permease component YC6258_RS01390 PF00005 ABC transporter YC6258_RS01395 PF13407 Periplasmic binding protein domain YC6258_RS01415 PF00109 Beta-ketoacyl synthase, N-terminal domain YC6258_RS01415 PF02801 Beta-ketoacyl synthase, C-terminal domain YC6258_RS01420 PF02080 TrkA-C domain YC6258_RS01420 PF06826 Predicted Permease Membrane Region YC6258_RS01425 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YC6258_RS01425 PF07992 Pyridine nucleotide-disulphide oxidoreductase YC6258_RS01430 PF00939 Sodium:sulfate symporter transmembrane region YC6258_RS01435 PF00989 PAS fold YC6258_RS01435 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS01435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS01450 PF00005 ABC transporter YC6258_RS01455 PF00034 Cytochrome c YC6258_RS01455 PF13442 Cytochrome C oxidase, cbb3-type, subunit III YC6258_RS01455 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP YC6258_RS01475 PF00005 ABC transporter YC6258_RS01480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YC6258_RS01490 PF00557 Metallopeptidase family M24 YC6258_RS01490 PF01321 Creatinase/Prolidase N-terminal domain YC6258_RS01495 PF13419 Haloacid dehalogenase-like hydrolase YC6258_RS01520 PF05567 Neisseria PilC beta-propeller domain YC6258_RS01530 PF00596 Class II Aldolase and Adducin N-terminal domain YC6258_RS01535 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YC6258_RS01540 PF12833 Helix-turn-helix domain YC6258_RS01540 PF02311 AraC-like ligand binding domain YC6258_RS01565 PF14338 Mrr N-terminal domain YC6258_RS01565 PF04471 Restriction endonuclease YC6258_RS01570 PF02610 L-arabinose isomerase YC6258_RS01570 PF11762 L-arabinose isomerase C-terminal domain YC6258_RS01580 PF01968 Hydantoinase/oxoprolinase YC6258_RS01580 PF05378 Hydantoinase/oxoprolinase N-terminal region YC6258_RS01615 PF03466 LysR substrate binding domain YC6258_RS01615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS01620 PF03358 NADPH-dependent FMN reductase YC6258_RS01625 PF00881 Nitroreductase family YC6258_RS01635 PF03239 Iron permease FTR1 family YC6258_RS01650 PF13614 AAA domain YC6258_RS01665 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase YC6258_RS01670 PF00483 Nucleotidyl transferase YC6258_RS01675 PF04321 RmlD substrate binding domain YC6258_RS01680 PF16363 GDP-mannose 4,6 dehydratase YC6258_RS01695 PF12804 MobA-like NTP transferase domain YC6258_RS01695 PF14602 Hexapeptide repeat of succinyl-transferase YC6258_RS01695 PF00132 Bacterial transferase hexapeptide (six repeats) YC6258_RS01705 PF01380 SIS domain YC6258_RS01720 PF13401 AAA domain YC6258_RS01720 PF01471 Putative peptidoglycan binding domain YC6258_RS01725 PF16363 GDP-mannose 4,6 dehydratase YC6258_RS01735 PF03707 Bacterial signalling protein N terminal repeat YC6258_RS01735 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS01735 PF00563 EAL domain YC6258_RS01740 PF00580 UvrD/REP helicase N-terminal domain YC6258_RS01740 PF13361 UvrD-like helicase C-terminal domain YC6258_RS01745 PF02386 Cation transport protein YC6258_RS01755 PF00210 Ferritin-like domain YC6258_RS01760 PF17820 PDZ domain YC6258_RS01760 PF02163 Peptidase family M50 YC6258_RS01770 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS01770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS01770 PF02743 Cache domain YC6258_RS01775 PF00158 Sigma-54 interaction domain YC6258_RS01775 PF02954 Bacterial regulatory protein, Fis family YC6258_RS01775 PF00072 Response regulator receiver domain YC6258_RS01785 PF01230 HIT domain YC6258_RS01790 PF00574 Clp protease YC6258_RS01800 PF00132 Bacterial transferase hexapeptide (six repeats) YC6258_RS01810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS01810 PF03466 LysR substrate binding domain YC6258_RS01825 PF03788 LrgA family YC6258_RS01835 PF00271 Helicase conserved C-terminal domain YC6258_RS01835 PF00270 DEAD/DEAH box helicase YC6258_RS01835 PF03880 DbpA RNA binding domain YC6258_RS01845 PF12146 Serine aminopeptidase, S33 YC6258_RS01850 PF13488 Glycine zipper YC6258_RS01850 PF00691 OmpA family YC6258_RS01860 PF13439 Glycosyltransferase Family 4 YC6258_RS01870 PF01545 Cation efflux family YC6258_RS01870 PF16916 Dimerisation domain of Zinc Transporter YC6258_RS01875 PF01554 MatE YC6258_RS01885 PF01037 Lrp/AsnC ligand binding domain YC6258_RS01890 PF00291 Pyridoxal-phosphate dependent enzyme YC6258_RS01935 PF03466 LysR substrate binding domain YC6258_RS01935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS01945 PF16655 PhoD-like phosphatase, N-terminal domain YC6258_RS01945 PF09423 PhoD-like phosphatase YC6258_RS01950 PF00291 Pyridoxal-phosphate dependent enzyme YC6258_RS01955 PF00128 Alpha amylase, catalytic domain YC6258_RS01960 PF01547 Bacterial extracellular solute-binding protein YC6258_RS01965 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS01970 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS01975 PF00128 Alpha amylase, catalytic domain YC6258_RS01980 PF00356 Bacterial regulatory proteins, lacI family YC6258_RS02000 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain YC6258_RS02000 PF01137 RNA 3'-terminal phosphate cyclase YC6258_RS02005 PF01139 tRNA-splicing ligase RtcB YC6258_RS02020 PF00158 Sigma-54 interaction domain YC6258_RS02020 PF06956 Regulator of RNA terminal phosphate cyclase YC6258_RS02035 PF10127 RNA repair pathway DNA polymerase beta family YC6258_RS02040 PF00392 Bacterial regulatory proteins, gntR family YC6258_RS02040 PF00155 Aminotransferase class I and II YC6258_RS02055 PF00005 ABC transporter YC6258_RS02055 PF12704 MacB-like periplasmic core domain YC6258_RS02055 PF02687 FtsX-like permease family YC6258_RS02060 PF12704 MacB-like periplasmic core domain YC6258_RS02060 PF00005 ABC transporter YC6258_RS02060 PF02687 FtsX-like permease family YC6258_RS02070 PF02321 Outer membrane efflux protein YC6258_RS02085 PF02311 AraC-like ligand binding domain YC6258_RS02085 PF12833 Helix-turn-helix domain YC6258_RS02095 PF05221 S-adenosyl-L-homocysteine hydrolase YC6258_RS02095 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain YC6258_RS02160 PF08402 TOBE domain YC6258_RS02160 PF00005 ABC transporter YC6258_RS02165 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS02170 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS02190 PF02779 Transketolase, pyrimidine binding domain YC6258_RS02190 PF02780 Transketolase, C-terminal domain YC6258_RS02190 PF00456 Transketolase, thiamine diphosphate binding domain YC6258_RS02200 PF02773 S-adenosylmethionine synthetase, C-terminal domain YC6258_RS02200 PF02772 S-adenosylmethionine synthetase, central domain YC6258_RS02200 PF00438 S-adenosylmethionine synthetase, N-terminal domain YC6258_RS02205 PF05221 S-adenosyl-L-homocysteine hydrolase YC6258_RS02205 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain YC6258_RS02210 PF02219 Methylenetetrahydrofolate reductase YC6258_RS02225 PF00585 C-terminal regulatory domain of Threonine dehydratase YC6258_RS02225 PF00291 Pyridoxal-phosphate dependent enzyme YC6258_RS02230 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase YC6258_RS02235 PF01979 Amidohydrolase family YC6258_RS02240 PF00392 Bacterial regulatory proteins, gntR family YC6258_RS02240 PF07702 UTRA domain YC6258_RS02245 PF01869 BadF/BadG/BcrA/BcrD ATPase family YC6258_RS02255 PF03372 Endonuclease/Exonuclease/phosphatase family YC6258_RS02280 PF13426 PAS domain YC6258_RS02280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS02280 PF08447 PAS fold YC6258_RS02285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS02285 PF00672 HAMP domain YC6258_RS02310 PF00664 ABC transporter transmembrane region YC6258_RS02310 PF00005 ABC transporter YC6258_RS02310 PF03412 Peptidase C39 family YC6258_RS02320 PF06594 Haemolysin-type calcium binding protein related domain YC6258_RS02320 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) YC6258_RS02330 PF00795 Carbon-nitrogen hydrolase YC6258_RS02335 PF07963 Prokaryotic N-terminal methylation motif YC6258_RS02335 PF08334 Type II secretion system (T2SS), protein G YC6258_RS02360 PF11412 Disulphide bond corrector protein DsbC YC6258_RS02360 PF02683 Cytochrome C biogenesis protein transmembrane region YC6258_RS02365 PF00085 Thioredoxin YC6258_RS02375 PF04024 PspC domain YC6258_RS02385 PF04012 PspA/IM30 family YC6258_RS02390 PF02954 Bacterial regulatory protein, Fis family YC6258_RS02390 PF00158 Sigma-54 interaction domain YC6258_RS02405 PF00356 Bacterial regulatory proteins, lacI family YC6258_RS02410 PF07745 Glycosyl hydrolase family 53 YC6258_RS02420 PF16884 N-terminal domain of oxidoreductase YC6258_RS02420 PF00107 Zinc-binding dehydrogenase YC6258_RS02430 PF00294 pfkB family carbohydrate kinase YC6258_RS02450 PF00072 Response regulator receiver domain YC6258_RS02450 PF00196 Bacterial regulatory proteins, luxR family YC6258_RS02475 PF17158 Membrane-associated sensor, integral membrane domain YC6258_RS02475 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS02495 PF00557 Metallopeptidase family M24 YC6258_RS02500 PF08281 Sigma-70, region 4 YC6258_RS02500 PF12680 SnoaL-like domain YC6258_RS02500 PF04542 Sigma-70 region 2 YC6258_RS02505 PF02627 Carboxymuconolactone decarboxylase family YC6258_RS02510 PF01694 Rhomboid family YC6258_RS02515 PF00486 Transcriptional regulatory protein, C terminal YC6258_RS02515 PF00072 Response regulator receiver domain YC6258_RS02520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS02520 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS02520 PF00672 HAMP domain YC6258_RS02525 PF00881 Nitroreductase family YC6258_RS02530 PF01926 50S ribosome-binding GTPase YC6258_RS02530 PF12631 MnmE helical domain YC6258_RS02530 PF10396 GTP-binding protein TrmE N-terminus YC6258_RS02535 PF14849 YidC periplasmic domain YC6258_RS02535 PF02096 60Kd inner membrane protein YC6258_RS02540 PF00825 Ribonuclease P YC6258_RS02545 PF00308 Bacterial dnaA protein YC6258_RS02545 PF08299 Bacterial dnaA protein helix-turn-helix YC6258_RS02545 PF11638 DnaA N-terminal domain YC6258_RS02550 PF00712 DNA polymerase III beta subunit, N-terminal domain YC6258_RS02550 PF02767 DNA polymerase III beta subunit, central domain YC6258_RS02550 PF02768 DNA polymerase III beta subunit, C-terminal domain YC6258_RS02555 PF02463 RecF/RecN/SMC N terminal domain YC6258_RS02560 PF00204 DNA gyrase B YC6258_RS02560 PF01751 Toprim domain YC6258_RS02560 PF18053 DNA gyrase B subunit insert domain YC6258_RS02560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS02560 PF00986 DNA gyrase B subunit, carboxyl terminus YC6258_RS02565 PF00884 Sulfatase YC6258_RS02575 PF08534 Redoxin YC6258_RS02575 PF00462 Glutaredoxin YC6258_RS02580 PF18317 Shikimate 5'-dehydrogenase C-terminal domain YC6258_RS02580 PF08501 Shikimate dehydrogenase substrate binding domain YC6258_RS02580 PF01488 Shikimate / quinate 5-dehydrogenase YC6258_RS02585 PF01300 Telomere recombination YC6258_RS02590 PF17782 DprA winged helix domain YC6258_RS02590 PF02481 DNA recombination-mediator protein A YC6258_RS02600 PF01327 Polypeptide deformylase YC6258_RS02605 PF00551 Formyl transferase YC6258_RS02605 PF02911 Formyl transferase, C-terminal domain YC6258_RS02610 PF01029 NusB family YC6258_RS02610 PF01189 16S rRNA methyltransferase RsmB/F YC6258_RS02615 PF02254 TrkA-N domain YC6258_RS02615 PF02080 TrkA-C domain YC6258_RS02620 PF02386 Cation transport protein YC6258_RS02630 PF02091 Glycyl-tRNA synthetase alpha subunit YC6258_RS02635 PF02092 Glycyl-tRNA synthetase beta subunit YC6258_RS02635 PF05746 DALR anticodon binding domain YC6258_RS02640 PF01553 Acyltransferase YC6258_RS02660 PF00486 Transcriptional regulatory protein, C terminal YC6258_RS02660 PF00072 Response regulator receiver domain YC6258_RS02665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS02680 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS02685 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS02690 PF03459 TOBE domain YC6258_RS02690 PF17912 MalK OB fold domain YC6258_RS02690 PF00005 ABC transporter YC6258_RS02700 PF00356 Bacterial regulatory proteins, lacI family YC6258_RS02710 PF00012 Hsp70 protein YC6258_RS02715 PF00171 Aldehyde dehydrogenase family YC6258_RS02720 PF00202 Aminotransferase class-III YC6258_RS02725 PF03466 LysR substrate binding domain YC6258_RS02725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS02735 PF07859 alpha/beta hydrolase fold YC6258_RS02800 PF13332 Hemagglutinin repeat YC6258_RS02800 PF18664 CdiA C-terminal tRNase domain YC6258_RS02825 PF04542 Sigma-70 region 2 YC6258_RS02825 PF04545 Sigma-70, region 4 YC6258_RS02825 PF04539 Sigma-70 region 3 YC6258_RS02830 PF00813 FliP family YC6258_RS02840 PF04509 CheC-like family YC6258_RS02840 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term YC6258_RS02850 PF00460 Flagella basal body rod protein YC6258_RS02850 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YC6258_RS02850 PF07559 Flagellar basal body protein FlaE YC6258_RS02855 PF03963 Flagellar hook capping protein - N-terminal region YC6258_RS02870 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YC6258_RS02870 PF02874 ATP synthase alpha/beta family, beta-barrel domain YC6258_RS02870 PF18269 T3SS EscN ATPase C-terminal domain YC6258_RS02885 PF01514 Secretory protein of YscJ/FliF family YC6258_RS02885 PF08345 Flagellar M-ring protein C-terminal YC6258_RS02890 PF02049 Flagellar hook-basal body complex protein FliE YC6258_RS02895 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YC6258_RS02895 PF00460 Flagella basal body rod protein YC6258_RS02905 PF02119 Flagellar P-ring protein YC6258_RS02910 PF02107 Flagellar L-ring protein YC6258_RS02920 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YC6258_RS02920 PF00460 Flagella basal body rod protein YC6258_RS02925 PF00460 Flagella basal body rod protein YC6258_RS02925 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YC6258_RS02930 PF00771 FHIPEP family YC6258_RS02935 PF01312 FlhB HrpN YscU SpaS Family YC6258_RS02945 PF01313 Bacterial export proteins, family 3 YC6258_RS02970 PF01266 FAD dependent oxidoreductase YC6258_RS02975 PF01177 Asp/Glu/Hydantoin racemase YC6258_RS02980 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS02985 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS02995 PF00005 ABC transporter YC6258_RS02995 PF08402 TOBE domain YC6258_RS03000 PF07729 FCD domain YC6258_RS03000 PF00392 Bacterial regulatory proteins, gntR family YC6258_RS03010 PF01565 FAD binding domain YC6258_RS03010 PF04030 D-arabinono-1,4-lactone oxidase YC6258_RS03025 PF00378 Enoyl-CoA hydratase/isomerase YC6258_RS03025 PF02911 Formyl transferase, C-terminal domain YC6258_RS03025 PF00551 Formyl transferase YC6258_RS03045 PF04303 PrpF protein YC6258_RS03050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS03050 PF03466 LysR substrate binding domain YC6258_RS03055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS03055 PF00672 HAMP domain YC6258_RS03075 PF00180 Isocitrate/isopropylmalate dehydrogenase YC6258_RS03080 PF08502 LeuA allosteric (dimerisation) domain YC6258_RS03080 PF00682 HMGL-like YC6258_RS03085 PF01432 Peptidase family M3 YC6258_RS03105 PF13439 Glycosyltransferase Family 4 YC6258_RS03105 PF00534 Glycosyl transferases group 1 YC6258_RS03120 PF00849 RNA pseudouridylate synthase YC6258_RS03125 PF00672 HAMP domain YC6258_RS03125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS03125 PF12729 Four helix bundle sensory module for signal transduction YC6258_RS03135 PF00731 AIR carboxylase YC6258_RS03140 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain YC6258_RS03140 PF02222 ATP-grasp domain YC6258_RS03150 PF00116 Cytochrome C oxidase subunit II, periplasmic domain YC6258_RS03150 PF02790 Cytochrome C oxidase subunit II, transmembrane domain YC6258_RS03155 PF00115 Cytochrome C and Quinol oxidase polypeptide I YC6258_RS03160 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 YC6258_RS03165 PF00510 Cytochrome c oxidase subunit III YC6258_RS03185 PF02628 Cytochrome oxidase assembly protein YC6258_RS03190 PF01040 UbiA prenyltransferase family YC6258_RS03195 PF02630 SCO1/SenC YC6258_RS03200 PF01926 50S ribosome-binding GTPase YC6258_RS03205 PF00034 Cytochrome c YC6258_RS03220 PF00258 Flavodoxin YC6258_RS03220 PF01613 Flavin reductase like domain YC6258_RS03235 PF00119 ATP synthase A chain YC6258_RS03240 PF00137 ATP synthase subunit C YC6258_RS03245 PF00430 ATP synthase B/B' CF(0) YC6258_RS03250 PF00213 ATP synthase delta (OSCP) subunit YC6258_RS03255 PF00306 ATP synthase alpha/beta chain, C terminal domain YC6258_RS03255 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YC6258_RS03255 PF02874 ATP synthase alpha/beta family, beta-barrel domain YC6258_RS03260 PF00231 ATP synthase YC6258_RS03265 PF02874 ATP synthase alpha/beta family, beta-barrel domain YC6258_RS03265 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YC6258_RS03270 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain YC6258_RS03270 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain YC6258_RS03280 PF00158 Sigma-54 interaction domain YC6258_RS03280 PF00072 Response regulator receiver domain YC6258_RS03280 PF02954 Bacterial regulatory protein, Fis family YC6258_RS03285 PF02397 Bacterial sugar transferase YC6258_RS03315 PF00535 Glycosyl transferase family 2 YC6258_RS03315 PF01501 Glycosyl transferase family 8 YC6258_RS03320 PF00534 Glycosyl transferases group 1 YC6258_RS03320 PF13439 Glycosyltransferase Family 4 YC6258_RS03325 PF03808 Glycosyl transferase WecB/TagA/CpsF family YC6258_RS03370 PF00899 ThiF family YC6258_RS03370 PF00581 Rhodanese-like domain YC6258_RS03375 PF00367 phosphotransferase system, EIIB YC6258_RS03375 PF02378 Phosphotransferase system, EIIC YC6258_RS03380 PF05524 PEP-utilising enzyme, N-terminal YC6258_RS03380 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YC6258_RS03380 PF02896 PEP-utilising enzyme, TIM barrel domain YC6258_RS03380 PF00381 PTS HPr component phosphorylation site YC6258_RS03380 PF00391 PEP-utilising enzyme, mobile domain YC6258_RS03385 PF04616 Glycosyl hydrolases family 43 YC6258_RS03390 PF17962 Bacterial macroglobulin domain 6 YC6258_RS03390 PF07678 A-macroglobulin TED domain YC6258_RS03390 PF01835 MG2 domain YC6258_RS03390 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain YC6258_RS03390 PF00207 Alpha-2-macroglobulin family YC6258_RS03390 PF07703 Alpha-2-macroglobulin bait region domain YC6258_RS03390 PF11974 Bacterial alpha-2-macroglobulin MG3 domain YC6258_RS03390 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain YC6258_RS03390 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain YC6258_RS03395 PF01547 Bacterial extracellular solute-binding protein YC6258_RS03410 PF04055 Radical SAM superfamily YC6258_RS03410 PF06968 Biotin and Thiamin Synthesis associated domain YC6258_RS03415 PF07504 Fungalysin/Thermolysin Propeptide Motif YC6258_RS03415 PF03413 Peptidase propeptide and YPEB domain YC6258_RS03415 PF02868 Thermolysin metallopeptidase, alpha-helical domain YC6258_RS03415 PF01447 Thermolysin metallopeptidase, catalytic domain YC6258_RS03415 PF04151 Bacterial pre-peptidase C-terminal domain YC6258_RS03425 PF00067 Cytochrome P450 YC6258_RS03430 PF00905 Penicillin binding protein transpeptidase domain YC6258_RS03430 PF00912 Transglycosylase YC6258_RS03430 PF06832 Penicillin-Binding Protein C-terminus Family YC6258_RS03590 PF00248 Aldo/keto reductase family YC6258_RS03595 PF03466 LysR substrate binding domain YC6258_RS03595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS03605 PF13442 Cytochrome C oxidase, cbb3-type, subunit III YC6258_RS03615 PF13361 UvrD-like helicase C-terminal domain YC6258_RS03615 PF00580 UvrD/REP helicase N-terminal domain YC6258_RS03620 PF00360 Phytochrome region YC6258_RS03620 PF00563 EAL domain YC6258_RS03620 PF01590 GAF domain YC6258_RS03620 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS03625 PF01546 Peptidase family M20/M25/M40 YC6258_RS03625 PF07687 Peptidase dimerisation domain YC6258_RS03630 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 YC6258_RS03655 PF09905 DNA-binding protein VF530 YC6258_RS03665 PF13676 TIR domain YC6258_RS03720 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS03720 PF00672 HAMP domain YC6258_RS03720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS03740 PF02608 ABC transporter substrate-binding protein PnrA-like YC6258_RS03755 PF01725 Ham1 family YC6258_RS03765 PF07021 Methionine biosynthesis protein MetW YC6258_RS03765 PF00561 alpha/beta hydrolase fold YC6258_RS03770 PF00561 alpha/beta hydrolase fold YC6258_RS03775 PF02594 Uncharacterised ACR, YggU family COG1872 YC6258_RS03780 PF02325 YGGT family YC6258_RS03785 PF14748 Pyrroline-5-carboxylate reductase dimerisation YC6258_RS03785 PF03807 NADP oxidoreductase coenzyme F420-dependent YC6258_RS03790 PF01168 Alanine racemase, N-terminal domain YC6258_RS03795 PF00437 Type II/IV secretion system protein YC6258_RS03800 PF00437 Type II/IV secretion system protein YC6258_RS03810 PF00762 Ferrochelatase YC6258_RS03820 PF00581 Rhodanese-like domain YC6258_RS03830 PF11892 Domain of unknown function (DUF3412) YC6258_RS03830 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases YC6258_RS03830 PF03641 Possible lysine decarboxylase YC6258_RS03840 PF03466 LysR substrate binding domain YC6258_RS03840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS03845 PF17191 RecG wedge domain YC6258_RS03845 PF00271 Helicase conserved C-terminal domain YC6258_RS03845 PF00270 DEAD/DEAH box helicase YC6258_RS03860 PF00005 ABC transporter YC6258_RS03865 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS03870 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS03875 PF00497 Bacterial extracellular solute-binding proteins, family 3 YC6258_RS03880 PF00497 Bacterial extracellular solute-binding proteins, family 3 YC6258_RS03885 PF00892 EamA-like transporter family YC6258_RS03890 PF01627 Hpt domain YC6258_RS03890 PF00072 Response regulator receiver domain YC6258_RS03890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS03890 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS03905 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS03905 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS03910 PF01042 Endoribonuclease L-PSP YC6258_RS03915 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain YC6258_RS03915 PF17810 Arginine decarboxylase helical bundle domain YC6258_RS03915 PF17944 Arginine decarboxylase C-terminal helical extension YC6258_RS03925 PF00216 Bacterial DNA-binding protein YC6258_RS03930 PF07992 Pyridine nucleotide-disulphide oxidoreductase YC6258_RS03930 PF18113 Rubredoxin binding C-terminal domain YC6258_RS03935 PF00301 Rubredoxin YC6258_RS03940 PF01040 UbiA prenyltransferase family YC6258_RS03945 PF00486 Transcriptional regulatory protein, C terminal YC6258_RS03945 PF00072 Response regulator receiver domain YC6258_RS03950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS03950 PF11808 Phosphate regulon sensor protein PhoR YC6258_RS03950 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS03950 PF00989 PAS fold YC6258_RS03955 PF00072 Response regulator receiver domain YC6258_RS03955 PF00486 Transcriptional regulatory protein, C terminal YC6258_RS03980 PF04055 Radical SAM superfamily YC6258_RS03980 PF16199 Radical_SAM C-terminal domain YC6258_RS04015 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family YC6258_RS04020 PF03480 Bacterial extracellular solute-binding protein, family 7 YC6258_RS04030 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component YC6258_RS04050 PF13520 Amino acid permease YC6258_RS04055 PF01037 Lrp/AsnC ligand binding domain YC6258_RS04100 PF04055 Radical SAM superfamily YC6258_RS04100 PF08497 Radical SAM N-terminal YC6258_RS04100 PF11842 Domain of unknown function (DUF3362) YC6258_RS04110 PF07152 YaeQ protein YC6258_RS04115 PF01906 Putative heavy-metal-binding YC6258_RS04120 PF01906 Putative heavy-metal-binding YC6258_RS04130 PF18337 RapA N-terminal Tudor like domain YC6258_RS04130 PF12137 RNA polymerase recycling family C-terminal YC6258_RS04130 PF00176 SNF2 family N-terminal domain YC6258_RS04130 PF00271 Helicase conserved C-terminal domain YC6258_RS04130 PF18339 RapA N-terminal Tudor like domain 1 YC6258_RS04140 PF05726 Pirin C-terminal cupin domain YC6258_RS04140 PF02678 Pirin YC6258_RS04155 PF06463 Molybdenum Cofactor Synthesis C YC6258_RS04155 PF04055 Radical SAM superfamily YC6258_RS04160 PF01790 Prolipoprotein diacylglyceryl transferase YC6258_RS04165 PF04261 Dyp-type peroxidase family YC6258_RS04170 PF01061 ABC-2 type transporter YC6258_RS04175 PF13302 Acetyltransferase (GNAT) domain YC6258_RS04180 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain YC6258_RS04180 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain YC6258_RS04180 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain YC6258_RS04190 PF07238 PilZ domain YC6258_RS04200 PF13372 Alginate export YC6258_RS04205 PF05048 Periplasmic copper-binding protein (NosD) YC6258_RS04210 PF03062 MBOAT, membrane-bound O-acyltransferase family YC6258_RS04215 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX YC6258_RS04225 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX YC6258_RS04225 PF16824 C-terminal carbohydrate-binding module YC6258_RS04230 PF05426 Alginate lyase YC6258_RS04235 PF01050 Mannose-6-phosphate isomerase YC6258_RS04235 PF00483 Nucleotidyl transferase YC6258_RS04240 PF01928 CYTH domain YC6258_RS04250 PF07859 alpha/beta hydrolase fold YC6258_RS04255 PF02386 Cation transport protein YC6258_RS04260 PF07683 Cobalamin synthesis protein cobW C-terminal domain YC6258_RS04260 PF02492 CobW/HypB/UreG, nucleotide-binding domain YC6258_RS04265 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS04265 PF00563 EAL domain YC6258_RS04265 PF13426 PAS domain YC6258_RS04270 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YC6258_RS04280 PF01329 Pterin 4 alpha carbinolamine dehydratase YC6258_RS04300 PF08443 RimK-like ATP-grasp domain YC6258_RS04300 PF18030 RimK PreATP-grasp domain YC6258_RS04315 PF04381 Putative exonuclease, RdgC YC6258_RS04330 PF00092 von Willebrand factor type A domain YC6258_RS04330 PF12034 Domain of unknown function (DUF3520) YC6258_RS04330 PF12450 von Willebrand factor YC6258_RS04335 PF00672 HAMP domain YC6258_RS04335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS04335 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS04340 PF00486 Transcriptional regulatory protein, C terminal YC6258_RS04340 PF00072 Response regulator receiver domain YC6258_RS04345 PF01295 Adenylate cyclase, class-I YC6258_RS04345 PF12633 Adenylate cyclase NT domain YC6258_RS04355 PF01791 DeoC/LacD family aldolase YC6258_RS04360 PF02885 Glycosyl transferase family, helical bundle domain YC6258_RS04360 PF00591 Glycosyl transferase family, a/b domain YC6258_RS04360 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain YC6258_RS04365 PF01676 Metalloenzyme superfamily YC6258_RS04370 PF01048 Phosphorylase superfamily YC6258_RS04375 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region YC6258_RS04395 PF00912 Transglycosylase YC6258_RS04410 PF07690 Major Facilitator Superfamily YC6258_RS04425 PF00135 Carboxylesterase family YC6258_RS04430 PF03466 LysR substrate binding domain YC6258_RS04430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS04435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS04435 PF03459 TOBE domain YC6258_RS04445 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS04450 PF00005 ABC transporter YC6258_RS04450 PF03459 TOBE domain YC6258_RS04460 PF00795 Carbon-nitrogen hydrolase YC6258_RS04475 PF01227 GTP cyclohydrolase I YC6258_RS04480 PF00478 IMP dehydrogenase / GMP reductase domain YC6258_RS04480 PF00571 CBS domain YC6258_RS04495 PF00709 Adenylosuccinate synthetase YC6258_RS04500 PF00206 Lyase YC6258_RS04500 PF10397 Adenylosuccinate lyase C-terminus YC6258_RS04505 PF06508 Queuosine biosynthesis protein QueC YC6258_RS04510 PF07724 AAA domain (Cdc48 subfamily) YC6258_RS04510 PF00004 ATPase family associated with various cellular activities (AAA) YC6258_RS04515 PF00227 Proteasome subunit YC6258_RS04525 PF18074 Primosomal protein N C-terminal domain YC6258_RS04525 PF00270 DEAD/DEAH box helicase YC6258_RS04525 PF00271 Helicase conserved C-terminal domain YC6258_RS04525 PF18319 PriA DNA helicase Cys-rich region (CRR) domain YC6258_RS04525 PF17764 3′ DNA-binding domain (3′BD) YC6258_RS04530 PF01197 Ribosomal protein L31 YC6258_RS04535 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain YC6258_RS04535 PF00056 lactate/malate dehydrogenase, NAD binding domain YC6258_RS04550 PF00873 AcrB/AcrD/AcrF family YC6258_RS04560 PF00085 Thioredoxin YC6258_RS04565 PF00905 Penicillin binding protein transpeptidase domain YC6258_RS04565 PF00912 Transglycosylase YC6258_RS04565 PF17092 Penicillin-binding protein OB-like domain YC6258_RS04570 PF11104 Type IV pilus assembly protein PilM; YC6258_RS04575 PF05137 Fimbrial assembly protein (PilN) YC6258_RS04580 PF04350 Pilus assembly protein, PilO YC6258_RS04585 PF04351 Pilus assembly protein, PilP YC6258_RS04590 PF03958 Bacterial type II/III secretion system short domain YC6258_RS04590 PF11741 AMIN domain YC6258_RS04590 PF07660 Secretin and TonB N terminus short domain YC6258_RS04590 PF00263 Bacterial type II and III secretion system protein YC6258_RS04595 PF01202 Shikimate kinase YC6258_RS04600 PF01761 3-dehydroquinate synthase YC6258_RS04610 PF00310 Glutamine amidotransferases class-II YC6258_RS04610 PF01493 GXGXG motif YC6258_RS04610 PF04898 Glutamate synthase central domain YC6258_RS04610 PF01645 Conserved region in glutamate synthase YC6258_RS04615 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster YC6258_RS04615 PF07992 Pyridine nucleotide-disulphide oxidoreductase YC6258_RS04630 PF01208 Uroporphyrinogen decarboxylase (URO-D) YC6258_RS04640 PF00902 Sec-independent protein translocase protein (TatC) YC6258_RS04645 PF02416 mttA/Hcf106 family YC6258_RS04650 PF02416 mttA/Hcf106 family YC6258_RS04660 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase YC6258_RS04665 PF03109 ABC1 family YC6258_RS04675 PF01209 ubiE/COQ5 methyltransferase family YC6258_RS04680 PF01547 Bacterial extracellular solute-binding protein YC6258_RS04685 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS04690 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS04695 PF17912 MalK OB fold domain YC6258_RS04695 PF03459 TOBE domain YC6258_RS04695 PF00005 ABC transporter YC6258_RS04700 PF03707 Bacterial signalling protein N terminal repeat YC6258_RS04700 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS04700 PF00563 EAL domain YC6258_RS04710 PF04227 Indigoidine synthase A like protein YC6258_RS04715 PF00294 pfkB family carbohydrate kinase YC6258_RS04725 PF00156 Phosphoribosyl transferase domain YC6258_RS04735 PF00440 Bacterial regulatory proteins, tetR family YC6258_RS04740 PF00696 Amino acid kinase family YC6258_RS04745 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain YC6258_RS04745 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II YC6258_RS04745 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YC6258_RS04745 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III YC6258_RS04750 PF00692 dUTPase YC6258_RS04755 PF04127 DNA / pantothenate metabolism flavoprotein YC6258_RS04755 PF02441 Flavoprotein YC6258_RS04760 PF01047 MarR family YC6258_RS04760 PF00480 ROK family YC6258_RS04765 PF04002 RadC-like JAB domain YC6258_RS04770 PF00830 Ribosomal L28 family YC6258_RS04775 PF00471 Ribosomal protein L33 YC6258_RS04780 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain YC6258_RS04780 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain YC6258_RS04780 PF06827 Zinc finger found in FPG and IleRS YC6258_RS04790 PF03605 Anaerobic c4-dicarboxylate membrane transporter YC6258_RS04800 PF01678 Diaminopimelate epimerase YC6258_RS04805 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain YC6258_RS04805 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain YC6258_RS04825 PF01636 Phosphotransferase enzyme family YC6258_RS04830 PF01367 5'-3' exonuclease, C-terminal SAM fold YC6258_RS04830 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain YC6258_RS04830 PF00476 DNA polymerase family A YC6258_RS04830 PF01612 3'-5' exonuclease YC6258_RS04840 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YC6258_RS04840 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YC6258_RS04860 PF17912 MalK OB fold domain YC6258_RS04860 PF00005 ABC transporter YC6258_RS04865 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS04870 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS04875 PF01547 Bacterial extracellular solute-binding protein YC6258_RS04880 PF00356 Bacterial regulatory proteins, lacI family YC6258_RS04885 PF00881 Nitroreductase family YC6258_RS04905 PF00975 Thioesterase domain YC6258_RS04905 PF00550 Phosphopantetheine attachment site YC6258_RS04905 PF00501 AMP-binding enzyme YC6258_RS04905 PF00668 Condensation domain YC6258_RS04905 PF13193 AMP-binding enzyme C-terminal domain YC6258_RS04910 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase YC6258_RS04910 PF03033 Glycosyltransferase family 28 N-terminal domain YC6258_RS04920 PF12706 Beta-lactamase superfamily domain YC6258_RS04950 PF01757 Acyltransferase family YC6258_RS04955 PF08240 Alcohol dehydrogenase GroES-like domain YC6258_RS04955 PF00107 Zinc-binding dehydrogenase YC6258_RS04965 PF00501 AMP-binding enzyme YC6258_RS04970 PF02803 Thiolase, C-terminal domain YC6258_RS04970 PF00108 Thiolase, N-terminal domain YC6258_RS04980 PF09618 CRISPR-associated protein (Cas_Csy4) YC6258_RS05040 PF02777 Iron/manganese superoxide dismutases, C-terminal domain YC6258_RS05040 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain YC6258_RS05065 PF07883 Cupin domain YC6258_RS05070 PF14583 Oligogalacturonate lyase YC6258_RS05075 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS05080 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS05085 PF17912 MalK OB fold domain YC6258_RS05085 PF00005 ABC transporter YC6258_RS05090 PF13416 Bacterial extracellular solute-binding protein YC6258_RS05095 PF04962 KduI/IolB family YC6258_RS05105 PF00294 pfkB family carbohydrate kinase YC6258_RS05110 PF01081 KDPG and KHG aldolase YC6258_RS05115 PF09339 IclR helix-turn-helix domain YC6258_RS05115 PF01614 Bacterial transcriptional regulator YC6258_RS05120 PF00356 Bacterial regulatory proteins, lacI family YC6258_RS05130 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YC6258_RS05130 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YC6258_RS05135 PF13802 Galactose mutarotase-like YC6258_RS05135 PF01055 Glycosyl hydrolases family 31 YC6258_RS05175 PF04984 Phage tail sheath protein subtilisin-like domain YC6258_RS05175 PF17482 Phage tail sheath C-terminal domain YC6258_RS05215 PF17758 Proteasomal ATPase OB N-terminal domain YC6258_RS05215 PF00004 ATPase family associated with various cellular activities (AAA) YC6258_RS05215 PF16450 Proteasomal ATPase OB C-terminal domain YC6258_RS05235 PF00150 Cellulase (glycosyl hydrolase family 5) YC6258_RS05235 PF02013 Cellulose or protein binding domain YC6258_RS05235 PF00553 Cellulose binding domain YC6258_RS05240 PF01740 STAS domain YC6258_RS05240 PF00916 Sulfate permease family YC6258_RS05245 PF02203 Tar ligand binding domain homologue YC6258_RS05245 PF00672 HAMP domain YC6258_RS05245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS05250 PF00293 NUDIX domain YC6258_RS05275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YC6258_RS05305 PF01551 Peptidase family M23 YC6258_RS05305 PF08525 Opacity-associated protein A N-terminal motif YC6258_RS05305 PF01476 LysM domain YC6258_RS05310 PF07683 Cobalamin synthesis protein cobW C-terminal domain YC6258_RS05310 PF02492 CobW/HypB/UreG, nucleotide-binding domain YC6258_RS05340 PF14572 Phosphoribosyl synthetase-associated domain YC6258_RS05340 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase YC6258_RS05345 PF17837 4'-phosphopantetheinyl transferase N-terminal domain YC6258_RS05345 PF01648 4'-phosphopantetheinyl transferase superfamily YC6258_RS05355 PF01136 Peptidase family U32 YC6258_RS05360 PF01136 Peptidase family U32 YC6258_RS05365 PF02036 SCP-2 sterol transfer family YC6258_RS05370 PF01053 Cys/Met metabolism PLP-dependent enzyme YC6258_RS05390 PF00266 Aminotransferase class-V YC6258_RS05395 PF08447 PAS fold YC6258_RS05395 PF13426 PAS domain YC6258_RS05395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS05400 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ YC6258_RS05405 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YC6258_RS05405 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YC6258_RS05415 PF00210 Ferritin-like domain YC6258_RS05425 PF06965 Na+/H+ antiporter 1 YC6258_RS05430 PF00356 Bacterial regulatory proteins, lacI family YC6258_RS05435 PF00356 Bacterial regulatory proteins, lacI family YC6258_RS05440 PF13416 Bacterial extracellular solute-binding protein YC6258_RS05445 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS05450 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS05455 PF02837 Glycosyl hydrolases family 2, sugar binding domain YC6258_RS05455 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 YC6258_RS05455 PF00703 Glycosyl hydrolases family 2 YC6258_RS05455 PF02836 Glycosyl hydrolases family 2, TIM barrel domain YC6258_RS05470 PF02954 Bacterial regulatory protein, Fis family YC6258_RS05470 PF00072 Response regulator receiver domain YC6258_RS05470 PF00158 Sigma-54 interaction domain YC6258_RS05485 PF00158 Sigma-54 interaction domain YC6258_RS05485 PF02954 Bacterial regulatory protein, Fis family YC6258_RS05485 PF00072 Response regulator receiver domain YC6258_RS05490 PF00440 Bacterial regulatory proteins, tetR family YC6258_RS05490 PF17922 Tetracyclin repressor-like, C-terminal domain YC6258_RS05495 PF13533 Biotin-lipoyl like YC6258_RS05500 PF07690 Major Facilitator Superfamily YC6258_RS05505 PF00544 Pectate lyase YC6258_RS05510 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain YC6258_RS05510 PF00749 tRNA synthetases class I (E and Q), catalytic domain YC6258_RS05515 PF13687 Domain of unknown function (DUF4153) YC6258_RS05525 PF00150 Cellulase (glycosyl hydrolase family 5) YC6258_RS05530 PF03641 Possible lysine decarboxylase YC6258_RS05540 PF03129 Anticodon binding domain YC6258_RS05540 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain YC6258_RS05540 PF02824 TGS domain YC6258_RS05540 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) YC6258_RS05555 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YC6258_RS05555 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YC6258_RS05565 PF17151 Periplasmic sensor domain YC6258_RS05565 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS05570 PF02074 Carboxypeptidase Taq (M32) metallopeptidase YC6258_RS05580 PF12848 ABC transporter YC6258_RS05580 PF16326 ABC transporter C-terminal domain YC6258_RS05580 PF00005 ABC transporter YC6258_RS05615 PF00472 RF-1 domain YC6258_RS05735 PF00132 Bacterial transferase hexapeptide (six repeats) YC6258_RS05745 PF00685 Sulfotransferase domain YC6258_RS05895 PF00672 HAMP domain YC6258_RS05895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS05895 PF17200 Single Cache domain 2 YC6258_RS05910 PF12833 Helix-turn-helix domain YC6258_RS05910 PF07883 Cupin domain YC6258_RS05915 PF08241 Methyltransferase domain YC6258_RS05935 PF07690 Major Facilitator Superfamily YC6258_RS05940 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YC6258_RS05940 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YC6258_RS05945 PF08241 Methyltransferase domain YC6258_RS05950 PF00360 Phytochrome region YC6258_RS05950 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS05950 PF01590 GAF domain YC6258_RS05950 PF00563 EAL domain YC6258_RS05960 PF00271 Helicase conserved C-terminal domain YC6258_RS05960 PF00270 DEAD/DEAH box helicase YC6258_RS05960 PF03880 DbpA RNA binding domain YC6258_RS05970 PF01131 DNA topoisomerase YC6258_RS05970 PF01751 Toprim domain YC6258_RS05980 PF08361 MAATS-type transcriptional repressor, C-terminal region YC6258_RS05980 PF00440 Bacterial regulatory proteins, tetR family YC6258_RS05985 PF00529 HlyD membrane-fusion protein of T1SS YC6258_RS05985 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YC6258_RS05990 PF00873 AcrB/AcrD/AcrF family YC6258_RS05995 PF08447 PAS fold YC6258_RS05995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS06000 PF00171 Aldehyde dehydrogenase family YC6258_RS06005 PF10063 Uncharacterized integral membrane protein (DUF2301) YC6258_RS06015 PF01425 Amidase YC6258_RS06025 PF01925 Sulfite exporter TauE/SafE YC6258_RS06030 PF00266 Aminotransferase class-V YC6258_RS06035 PF07687 Peptidase dimerisation domain YC6258_RS06035 PF01546 Peptidase family M20/M25/M40 YC6258_RS06045 PF03186 CobD/Cbib protein YC6258_RS06050 PF00155 Aminotransferase class I and II YC6258_RS06055 PF02311 AraC-like ligand binding domain YC6258_RS06055 PF12833 Helix-turn-helix domain YC6258_RS06085 PF01654 Cytochrome bd terminal oxidase subunit I YC6258_RS06090 PF02322 Cytochrome bd terminal oxidase subunit II YC6258_RS06095 PF00877 NlpC/P60 family YC6258_RS06105 PF07690 Major Facilitator Superfamily YC6258_RS06110 PF03466 LysR substrate binding domain YC6258_RS06110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS06115 PF00375 Sodium:dicarboxylate symporter family YC6258_RS06120 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS06120 PF00360 Phytochrome region YC6258_RS06120 PF01590 GAF domain YC6258_RS06120 PF00563 EAL domain YC6258_RS06130 PF00400 WD domain, G-beta repeat YC6258_RS06130 PF12894 Anaphase-promoting complex subunit 4 WD40 domain YC6258_RS06140 PF00012 Hsp70 protein YC6258_RS06155 PF03466 LysR substrate binding domain YC6258_RS06155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS06160 PF00082 Subtilase family YC6258_RS06160 PF13860 FlgD Ig-like domain YC6258_RS06160 PF02225 PA domain YC6258_RS06160 PF05922 Peptidase inhibitor I9 YC6258_RS06175 PF04055 Radical SAM superfamily YC6258_RS06175 PF06969 HemN C-terminal domain YC6258_RS06180 PF03652 Holliday junction resolvase YC6258_RS06190 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain YC6258_RS06190 PF02951 Prokaryotic glutathione synthetase, N-terminal domain YC6258_RS06195 PF00072 Response regulator receiver domain YC6258_RS06200 PF00072 Response regulator receiver domain YC6258_RS06205 PF01584 CheW-like domain YC6258_RS06210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS06210 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term YC6258_RS06215 PF01739 CheR methyltransferase, SAM binding domain YC6258_RS06215 PF03705 CheR methyltransferase, all-alpha domain YC6258_RS06220 PF01584 CheW-like domain YC6258_RS06220 PF02895 Signal transducing histidine kinase, homodimeric domain YC6258_RS06220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS06220 PF00072 Response regulator receiver domain YC6258_RS06220 PF01627 Hpt domain YC6258_RS06225 PF01339 CheB methylesterase YC6258_RS06240 PF03372 Endonuclease/Exonuclease/phosphatase family YC6258_RS06245 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YC6258_RS06250 PF07690 Major Facilitator Superfamily YC6258_RS06260 PF10119 Predicted methyltransferase regulatory domain YC6258_RS06260 PF13847 Methyltransferase domain YC6258_RS06275 PF01012 Electron transfer flavoprotein domain YC6258_RS06275 PF00766 Electron transfer flavoprotein FAD-binding domain YC6258_RS06280 PF02754 Cysteine-rich domain YC6258_RS06280 PF13183 4Fe-4S dicluster domain YC6258_RS06285 PF00724 NADH:flavin oxidoreductase / NADH oxidase family YC6258_RS06300 PF01244 Membrane dipeptidase (Peptidase family M19) YC6258_RS06305 PF01965 DJ-1/PfpI family YC6258_RS06305 PF12833 Helix-turn-helix domain YC6258_RS06310 PF03009 Glycerophosphoryl diester phosphodiesterase family YC6258_RS06330 PF05114 Protein of unknown function (DUF692) YC6258_RS06345 PF00672 HAMP domain YC6258_RS06345 PF12729 Four helix bundle sensory module for signal transduction YC6258_RS06345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS06365 PF00158 Sigma-54 interaction domain YC6258_RS06365 PF00072 Response regulator receiver domain YC6258_RS06375 PF13756 Stimulus-sensing domain YC6258_RS06375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS06375 PF00672 HAMP domain YC6258_RS06375 PF13755 Sensor N-terminal transmembrane domain YC6258_RS06375 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS06385 PF12806 Acetyl-CoA dehydrogenase C-terminal like YC6258_RS06385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YC6258_RS06385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YC6258_RS06385 PF02770 Acyl-CoA dehydrogenase, middle domain YC6258_RS06390 PF02770 Acyl-CoA dehydrogenase, middle domain YC6258_RS06390 PF12806 Acetyl-CoA dehydrogenase C-terminal like YC6258_RS06390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YC6258_RS06390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YC6258_RS06395 PF02770 Acyl-CoA dehydrogenase, middle domain YC6258_RS06395 PF18158 Adaptive response protein AidB N-terminal domain YC6258_RS06395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YC6258_RS06415 PF00005 ABC transporter YC6258_RS06415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YC6258_RS06420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YC6258_RS06420 PF00005 ABC transporter YC6258_RS06425 PF12911 N-terminal TM domain of oligopeptide transport permease C YC6258_RS06425 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS06430 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS06435 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YC6258_RS06445 PF00005 ABC transporter YC6258_RS06450 PF00497 Bacterial extracellular solute-binding proteins, family 3 YC6258_RS06455 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS06460 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS06465 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family YC6258_RS06475 PF01812 5-formyltetrahydrofolate cyclo-ligase family YC6258_RS06480 PF05164 Cell division protein ZapA YC6258_RS06495 PF00557 Metallopeptidase family M24 YC6258_RS06495 PF05195 Aminopeptidase P, N-terminal domain YC6258_RS06500 PF04452 RNA methyltransferase YC6258_RS06510 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase YC6258_RS06515 PF02602 Uroporphyrinogen-III synthase HemD YC6258_RS06520 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain YC6258_RS06520 PF03900 Porphobilinogen deaminase, C-terminal domain YC6258_RS06530 PF08774 VRR-NUC domain YC6258_RS06530 PF18081 Fanconi anemia-associated nuclease SAP domain YC6258_RS06560 PF02390 Putative methyltransferase YC6258_RS06565 PF04241 Protein of unknown function (DUF423) YC6258_RS06570 PF00140 Sigma-70 factor, region 1.2 YC6258_RS06570 PF04542 Sigma-70 region 2 YC6258_RS06570 PF04545 Sigma-70, region 4 YC6258_RS06575 PF18075 FtsX extracellular domain YC6258_RS06580 PF00005 ABC transporter YC6258_RS06585 PF02881 SRP54-type protein, helical bundle domain YC6258_RS06585 PF00448 SRP54-type protein, GTPase domain YC6258_RS06600 PF00171 Aldehyde dehydrogenase family YC6258_RS06605 PF01467 Cytidylyltransferase-like YC6258_RS06610 PF00037 4Fe-4S binding domain YC6258_RS06615 PF04397 LytTr DNA-binding domain YC6258_RS06615 PF00072 Response regulator receiver domain YC6258_RS06620 PF06580 Histidine kinase YC6258_RS06620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS06620 PF07694 5TMR of 5TMR-LYT YC6258_RS06625 PF00672 HAMP domain YC6258_RS06625 PF02743 Cache domain YC6258_RS06625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS06630 PF00206 Lyase YC6258_RS06630 PF14698 Argininosuccinate lyase C-terminal YC6258_RS06650 PF13188 PAS domain YC6258_RS06650 PF00563 EAL domain YC6258_RS06650 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS06650 PF03707 Bacterial signalling protein N terminal repeat YC6258_RS06660 PF00011 Hsp20/alpha crystallin family YC6258_RS06665 PF03600 Citrate transporter YC6258_RS06685 PF00037 4Fe-4S binding domain YC6258_RS06685 PF13187 4Fe-4S dicluster domain YC6258_RS06685 PF12800 4Fe-4S binding domain YC6258_RS06695 PF00384 Molybdopterin oxidoreductase YC6258_RS06695 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YC6258_RS06695 PF01568 Molydopterin dinucleotide binding domain YC6258_RS06700 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) YC6258_RS06705 PF03264 NapC/NirT cytochrome c family, N-terminal region YC6258_RS06710 PF02391 MoaE protein YC6258_RS06715 PF02597 ThiS family YC6258_RS06720 PF01967 MoaC family YC6258_RS06725 PF00994 Probable molybdopterin binding domain YC6258_RS06730 PF12804 MobA-like NTP transferase domain YC6258_RS06735 PF06463 Molybdenum Cofactor Synthesis C YC6258_RS06735 PF04055 Radical SAM superfamily YC6258_RS06740 PF06969 HemN C-terminal domain YC6258_RS06740 PF04055 Radical SAM superfamily YC6258_RS06750 PF00583 Acetyltransferase (GNAT) family YC6258_RS06750 PF00696 Amino acid kinase family YC6258_RS06755 PF00106 short chain dehydrogenase YC6258_RS06760 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family YC6258_RS06765 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase YC6258_RS06770 PF02277 Phosphoribosyltransferase YC6258_RS06775 PF02654 Cobalamin-5-phosphate synthase YC6258_RS06780 PF01497 Periplasmic binding protein YC6258_RS06790 PF01625 Peptide methionine sulfoxide reductase YC6258_RS06795 PF07238 PilZ domain YC6258_RS06800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YC6258_RS06805 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS06810 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS06810 PF12911 N-terminal TM domain of oligopeptide transport permease C YC6258_RS06815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YC6258_RS06815 PF00005 ABC transporter YC6258_RS06820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YC6258_RS06820 PF00005 ABC transporter YC6258_RS06825 PF00920 Dehydratase family YC6258_RS06830 PF10576 Iron-sulfur binding domain of endonuclease III YC6258_RS06830 PF14815 NUDIX domain YC6258_RS06830 PF00730 HhH-GPD superfamily base excision DNA repair protein YC6258_RS06830 PF00633 Helix-hairpin-helix motif YC6258_RS06835 PF04362 Bacterial Fe(2+) trafficking YC6258_RS06855 PF01205 Uncharacterized protein family UPF0029 YC6258_RS06855 PF09186 Domain of unknown function (DUF1949) YC6258_RS06860 PF00072 Response regulator receiver domain YC6258_RS06860 PF01627 Hpt domain YC6258_RS06860 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS06860 PF00672 HAMP domain YC6258_RS06860 PF17149 Periplasmic sensor domain found in signal transduction proteins YC6258_RS06860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS06865 PF01243 Pyridoxamine 5'-phosphate oxidase YC6258_RS06885 PF00732 GMC oxidoreductase YC6258_RS06885 PF05199 GMC oxidoreductase YC6258_RS06900 PF00848 Ring hydroxylating alpha subunit (catalytic domain) YC6258_RS06900 PF00355 Rieske [2Fe-2S] domain YC6258_RS06915 PF01915 Glycosyl hydrolase family 3 C-terminal domain YC6258_RS06915 PF00933 Glycosyl hydrolase family 3 N terminal domain YC6258_RS06915 PF14310 Fibronectin type III-like domain YC6258_RS06920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YC6258_RS06920 PF00529 HlyD membrane-fusion protein of T1SS YC6258_RS06925 PF00873 AcrB/AcrD/AcrF family YC6258_RS06935 PF17158 Membrane-associated sensor, integral membrane domain YC6258_RS06935 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS06945 PF12805 FUSC-like inner membrane protein yccS YC6258_RS06955 PF00672 HAMP domain YC6258_RS06955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS06955 PF12729 Four helix bundle sensory module for signal transduction YC6258_RS06960 PF01040 UbiA prenyltransferase family YC6258_RS06990 PF00899 ThiF family YC6258_RS07000 PF00553 Cellulose binding domain YC6258_RS07000 PF00041 Fibronectin type III domain YC6258_RS07000 PF00704 Glycosyl hydrolases family 18 YC6258_RS07005 PF00155 Aminotransferase class I and II YC6258_RS07010 PF03749 Sugar fermentation stimulation protein RE domain YC6258_RS07010 PF17746 SfsA N-terminal OB domain YC6258_RS07015 PF00892 EamA-like transporter family YC6258_RS07030 PF00072 Response regulator receiver domain YC6258_RS07030 PF01627 Hpt domain YC6258_RS07030 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS07030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS07030 PF00497 Bacterial extracellular solute-binding proteins, family 3 YC6258_RS07035 PF00300 Histidine phosphatase superfamily (branch 1) YC6258_RS07040 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YC6258_RS07040 PF07498 Rho termination factor, N-terminal domain YC6258_RS07040 PF07497 Rho termination factor, RNA-binding domain YC6258_RS07045 PF00085 Thioredoxin YC6258_RS07050 PF00490 Delta-aminolevulinic acid dehydratase YC6258_RS07065 PF00672 HAMP domain YC6258_RS07065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS07075 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YC6258_RS07075 PF00205 Thiamine pyrophosphate enzyme, central domain YC6258_RS07075 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YC6258_RS07085 PF10017 Histidine-specific methyltransferase, SAM-dependent YC6258_RS07090 PF03781 Sulfatase-modifying factor enzyme 1 YC6258_RS07090 PF12867 DinB superfamily YC6258_RS07115 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS07120 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS07125 PF00005 ABC transporter YC6258_RS07155 PF03466 LysR substrate binding domain YC6258_RS07155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS07165 PF01661 Macro domain YC6258_RS07170 PF12729 Four helix bundle sensory module for signal transduction YC6258_RS07170 PF00672 HAMP domain YC6258_RS07170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS07180 PF00005 ABC transporter YC6258_RS07185 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS07200 PF13247 4Fe-4S dicluster domain YC6258_RS07200 PF07992 Pyridine nucleotide-disulphide oxidoreductase YC6258_RS07200 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster YC6258_RS07205 PF00672 HAMP domain YC6258_RS07205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS07235 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YC6258_RS07255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS07255 PF00672 HAMP domain YC6258_RS07255 PF02743 Cache domain YC6258_RS07260 PF02424 ApbE family YC6258_RS07275 PF00578 AhpC/TSA family YC6258_RS07285 PF00005 ABC transporter YC6258_RS07285 PF00571 CBS domain YC6258_RS07290 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS07295 PF04069 Substrate binding domain of ABC-type glycine betaine transport system YC6258_RS07300 PF00732 GMC oxidoreductase YC6258_RS07300 PF05199 GMC oxidoreductase YC6258_RS07305 PF00171 Aldehyde dehydrogenase family YC6258_RS07310 PF13977 BetI-type transcriptional repressor, C-terminal YC6258_RS07310 PF00440 Bacterial regulatory proteins, tetR family YC6258_RS07320 PF00296 Luciferase-like monooxygenase YC6258_RS07330 PF00672 HAMP domain YC6258_RS07330 PF02743 Cache domain YC6258_RS07330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS07335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YC6258_RS07335 PF01261 Xylose isomerase-like TIM barrel YC6258_RS07340 PF00392 Bacterial regulatory proteins, gntR family YC6258_RS07340 PF07729 FCD domain YC6258_RS07345 PF18317 Shikimate 5'-dehydrogenase C-terminal domain YC6258_RS07345 PF08501 Shikimate dehydrogenase substrate binding domain YC6258_RS07350 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component YC6258_RS07360 PF03480 Bacterial extracellular solute-binding protein, family 7 YC6258_RS07365 PF09350 Domain of unknown function (DUF1992) YC6258_RS07370 PF04231 Endonuclease I YC6258_RS07380 PF04151 Bacterial pre-peptidase C-terminal domain YC6258_RS07380 PF00082 Subtilase family YC6258_RS07385 PF13192 Thioredoxin domain YC6258_RS07385 PF07992 Pyridine nucleotide-disulphide oxidoreductase YC6258_RS07390 PF00578 AhpC/TSA family YC6258_RS07395 PF00891 O-methyltransferase domain YC6258_RS07415 PF00583 Acetyltransferase (GNAT) family YC6258_RS07425 PF00144 Beta-lactamase YC6258_RS07430 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YC6258_RS07430 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YC6258_RS07435 PF00149 Calcineurin-like phosphoesterase YC6258_RS07435 PF02872 5'-nucleotidase, C-terminal domain YC6258_RS07440 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YC6258_RS07440 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YC6258_RS07445 PF08443 RimK-like ATP-grasp domain YC6258_RS07445 PF18030 RimK PreATP-grasp domain YC6258_RS07450 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS07450 PF01590 GAF domain YC6258_RS07450 PF00360 Phytochrome region YC6258_RS07450 PF00563 EAL domain YC6258_RS07515 PF05711 Macrocin-O-methyltransferase (TylF) YC6258_RS07540 PF00583 Acetyltransferase (GNAT) family YC6258_RS07555 PF00128 Alpha amylase, catalytic domain YC6258_RS07565 PF00356 Bacterial regulatory proteins, lacI family YC6258_RS07580 PF02472 Biopolymer transport protein ExbD/TolR YC6258_RS07585 PF01618 MotA/TolQ/ExbB proton channel family YC6258_RS07590 PF00686 Starch binding domain YC6258_RS07590 PF01373 Glycosyl hydrolase family 14 YC6258_RS07595 PF00324 Amino acid permease YC6258_RS07600 PF01266 FAD dependent oxidoreductase YC6258_RS07605 PF01042 Endoribonuclease L-PSP YC6258_RS07610 PF02423 Ornithine cyclodeaminase/mu-crystallin family YC6258_RS07630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS07635 PF00072 Response regulator receiver domain YC6258_RS07635 PF00486 Transcriptional regulatory protein, C terminal YC6258_RS07660 PF07883 Cupin domain YC6258_RS07660 PF01381 Helix-turn-helix YC6258_RS07665 PF03594 Benzoate membrane transport protein YC6258_RS07670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS07670 PF03466 LysR substrate binding domain YC6258_RS07675 PF01810 LysE type translocator YC6258_RS07680 PF06165 Glycosyltransferase family 36 YC6258_RS07680 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain YC6258_RS07685 PF00356 Bacterial regulatory proteins, lacI family YC6258_RS07695 PF03881 Fructosamine kinase YC6258_RS07715 PF06744 Type VI secretion protein IcmF C-terminal YC6258_RS07715 PF14331 ImcF-related N-terminal domain YC6258_RS07715 PF06761 Intracellular multiplication and human macrophage-killing YC6258_RS07750 PF05947 Type VI secretion system, TssF YC6258_RS07760 PF00004 ATPase family associated with various cellular activities (AAA) YC6258_RS07760 PF10431 C-terminal, D2-small domain, of ClpB protein YC6258_RS07760 PF17871 AAA lid domain YC6258_RS07760 PF07724 AAA domain (Cdc48 subfamily) YC6258_RS07770 PF03315 Serine dehydratase beta chain YC6258_RS07770 PF03313 Serine dehydratase alpha chain YC6258_RS07790 PF01266 FAD dependent oxidoreductase YC6258_RS07795 PF04267 Sarcosine oxidase, delta subunit family YC6258_RS07800 PF01571 Aminomethyltransferase folate-binding domain YC6258_RS07800 PF07992 Pyridine nucleotide-disulphide oxidoreductase YC6258_RS07800 PF08669 Glycine cleavage T-protein C-terminal barrel domain YC6258_RS07800 PF17806 Sarcosine oxidase A3 domain YC6258_RS07830 PF00975 Thioesterase domain YC6258_RS07830 PF00550 Phosphopantetheine attachment site YC6258_RS07830 PF00668 Condensation domain YC6258_RS07830 PF00501 AMP-binding enzyme YC6258_RS07830 PF13193 AMP-binding enzyme C-terminal domain YC6258_RS07835 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain YC6258_RS07835 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain YC6258_RS07840 PF13193 AMP-binding enzyme C-terminal domain YC6258_RS07840 PF00550 Phosphopantetheine attachment site YC6258_RS07840 PF00668 Condensation domain YC6258_RS07840 PF00501 AMP-binding enzyme YC6258_RS07845 PF00501 AMP-binding enzyme YC6258_RS07845 PF00550 Phosphopantetheine attachment site YC6258_RS07845 PF13193 AMP-binding enzyme C-terminal domain YC6258_RS07845 PF00668 Condensation domain YC6258_RS07850 PF08028 Acyl-CoA dehydrogenase, C-terminal domain YC6258_RS07865 PF01740 STAS domain YC6258_RS07865 PF00916 Sulfate permease family YC6258_RS07870 PF00582 Universal stress protein family YC6258_RS07880 PF00485 Phosphoribulokinase / Uridine kinase family YC6258_RS07885 PF00162 Phosphoglycerate kinase YC6258_RS07890 PF01116 Fructose-bisphosphate aldolase class-II YC6258_RS07910 PF08402 TOBE domain YC6258_RS07910 PF00005 ABC transporter YC6258_RS07920 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS07925 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS07930 PF00970 Oxidoreductase FAD-binding domain YC6258_RS07930 PF00175 Oxidoreductase NAD-binding domain YC6258_RS07935 PF03466 LysR substrate binding domain YC6258_RS07935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS07940 PF00563 EAL domain YC6258_RS07940 PF01590 GAF domain YC6258_RS07940 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS07940 PF00360 Phytochrome region YC6258_RS07945 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YC6258_RS07945 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YC6258_RS07945 PF01842 ACT domain YC6258_RS07975 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS07980 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS07985 PF00011 Hsp20/alpha crystallin family YC6258_RS07990 PF01557 Fumarylacetoacetate (FAA) hydrolase family YC6258_RS07995 PF18073 Rubredoxin metal binding domain YC6258_RS08005 PF00136 DNA polymerase family B YC6258_RS08005 PF03104 DNA polymerase family B, exonuclease domain YC6258_RS08010 PF03466 LysR substrate binding domain YC6258_RS08010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS08030 PF00905 Penicillin binding protein transpeptidase domain YC6258_RS08030 PF00912 Transglycosylase YC6258_RS08030 PF14814 Bifunctional transglycosylase second domain YC6258_RS08035 PF00248 Aldo/keto reductase family YC6258_RS08040 PF05159 Capsule polysaccharide biosynthesis protein YC6258_RS08045 PF05159 Capsule polysaccharide biosynthesis protein YC6258_RS08050 PF01380 SIS domain YC6258_RS08050 PF00571 CBS domain YC6258_RS08065 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus YC6258_RS08065 PF08666 SAF domain YC6258_RS08100 PF00356 Bacterial regulatory proteins, lacI family YC6258_RS08105 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YC6258_RS08105 PF13378 Enolase C-terminal domain-like YC6258_RS08110 PF03328 HpcH/HpaI aldolase/citrate lyase family YC6258_RS08115 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase YC6258_RS08115 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase YC6258_RS08120 PF01066 CDP-alcohol phosphatidyltransferase YC6258_RS08125 PF00005 ABC transporter YC6258_RS08130 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS08135 PF13416 Bacterial extracellular solute-binding protein YC6258_RS08140 PF08335 GlnD PII-uridylyltransferase YC6258_RS08140 PF03710 Glutamate-ammonia ligase adenylyltransferase YC6258_RS08145 PF01063 Amino-transferase class IV YC6258_RS08155 PF01075 Glycosyltransferase family 9 (heptosyltransferase) YC6258_RS08165 PF03279 Bacterial lipid A biosynthesis acyltransferase YC6258_RS08175 PF00501 AMP-binding enzyme YC6258_RS08175 PF13193 AMP-binding enzyme C-terminal domain YC6258_RS08185 PF00534 Glycosyl transferases group 1 YC6258_RS08185 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) YC6258_RS08190 PF02321 Outer membrane efflux protein YC6258_RS08195 PF00293 NUDIX domain YC6258_RS08205 PF00149 Calcineurin-like phosphoesterase YC6258_RS08210 PF05728 Uncharacterised protein family (UPF0227) YC6258_RS08215 PF00986 DNA gyrase B subunit, carboxyl terminus YC6258_RS08215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS08215 PF01751 Toprim domain YC6258_RS08215 PF00204 DNA gyrase B YC6258_RS08225 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain YC6258_RS08240 PF04055 Radical SAM superfamily YC6258_RS08240 PF02579 Dinitrogenase iron-molybdenum cofactor YC6258_RS08245 PF12838 4Fe-4S dicluster domain YC6258_RS08250 PF04891 NifQ YC6258_RS08255 PF00462 Glutaredoxin YC6258_RS08260 PF01722 BolA-like protein YC6258_RS08280 PF04143 Sulphur transport YC6258_RS08285 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS08290 PF00005 ABC transporter YC6258_RS08305 PF00586 AIR synthase related protein, N-terminal domain YC6258_RS08305 PF02769 AIR synthase related protein, C-terminal domain YC6258_RS08315 PF00672 HAMP domain YC6258_RS08315 PF02743 Cache domain YC6258_RS08315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS08330 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family YC6258_RS08335 PF00148 Nitrogenase component 1 type Oxidoreductase YC6258_RS08340 PF11844 Domain of unknown function (DUF3364) YC6258_RS08340 PF00148 Nitrogenase component 1 type Oxidoreductase YC6258_RS08345 PF06988 NifT/FixU protein YC6258_RS08350 PF02579 Dinitrogenase iron-molybdenum cofactor YC6258_RS08350 PF16844 Dinitrogenase iron-molybdenum cofactor, N-terminal YC6258_RS08365 PF13419 Haloacid dehalogenase-like hydrolase YC6258_RS08385 PF03737 Aldolase/RraA YC6258_RS08400 PF01212 Beta-eliminating lyase YC6258_RS08410 PF00005 ABC transporter YC6258_RS08410 PF00664 ABC transporter transmembrane region YC6258_RS08415 PF04055 Radical SAM superfamily YC6258_RS08415 PF06969 HemN C-terminal domain YC6258_RS08450 PF01226 Formate/nitrite transporter YC6258_RS08455 PF13806 Rieske-like [2Fe-2S] domain YC6258_RS08460 PF13806 Rieske-like [2Fe-2S] domain YC6258_RS08460 PF18267 Rubredoxin NAD+ reductase C-terminal domain YC6258_RS08460 PF04324 BFD-like [2Fe-2S] binding domain YC6258_RS08460 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain YC6258_RS08460 PF01077 Nitrite and sulphite reductase 4Fe-4S domain YC6258_RS08460 PF07992 Pyridine nucleotide-disulphide oxidoreductase YC6258_RS08465 PF03861 ANTAR domain YC6258_RS08465 PF08376 Nitrate and nitrite sensing YC6258_RS08470 PF03144 Elongation factor Tu domain 2 YC6258_RS08470 PF00009 Elongation factor Tu GTP binding domain YC6258_RS08470 PF16658 Class II release factor RF3, C-terminal domain YC6258_RS08480 PF00572 Ribosomal protein L13 YC6258_RS08485 PF00380 Ribosomal protein S9/S16 YC6258_RS08490 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal YC6258_RS08490 PF00355 Rieske [2Fe-2S] domain YC6258_RS08495 PF00033 Cytochrome b/b6/petB YC6258_RS08495 PF00032 Cytochrome b(C-terminal)/b6/petD YC6258_RS08500 PF02167 Cytochrome C1 family YC6258_RS08505 PF02798 Glutathione S-transferase, N-terminal domain YC6258_RS08505 PF00043 Glutathione S-transferase, C-terminal domain YC6258_RS08530 PF00480 ROK family YC6258_RS08535 PF00480 ROK family YC6258_RS08535 PF01325 Iron dependent repressor, N-terminal DNA binding domain YC6258_RS08545 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS08550 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS08560 PF17657 Bacterial DNA polymerase III alpha subunit finger domain YC6258_RS08560 PF07733 Bacterial DNA polymerase III alpha NTPase domain YC6258_RS08560 PF14579 Helix-hairpin-helix motif YC6258_RS08560 PF02811 PHP domain YC6258_RS08560 PF01336 OB-fold nucleic acid binding domain YC6258_RS08580 PF01494 FAD binding domain YC6258_RS08585 PF01494 FAD binding domain YC6258_RS08600 PF00202 Aminotransferase class-III YC6258_RS08610 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YC6258_RS08610 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YC6258_RS08620 PF00850 Histone deacetylase domain YC6258_RS08630 PF13439 Glycosyltransferase Family 4 YC6258_RS08630 PF00534 Glycosyl transferases group 1 YC6258_RS08635 PF00535 Glycosyl transferase family 2 YC6258_RS08645 PF00120 Glutamine synthetase, catalytic domain YC6258_RS08645 PF03951 Glutamine synthetase, beta-Grasp domain YC6258_RS08650 PF02926 THUMP domain YC6258_RS08650 PF02568 Thiamine biosynthesis protein (ThiI) YC6258_RS08655 PF02556 Preprotein translocase subunit SecB YC6258_RS08660 PF00462 Glutaredoxin YC6258_RS08665 PF00581 Rhodanese-like domain YC6258_RS08670 PF06415 BPG-independent PGAM N-terminus (iPGM_N) YC6258_RS08670 PF01676 Metalloenzyme superfamily YC6258_RS08675 PF01551 Peptidase family M23 YC6258_RS08680 PF13180 PDZ domain YC6258_RS08680 PF03572 Peptidase family S41 YC6258_RS08685 PF04748 Divergent polysaccharide deacetylase YC6258_RS08690 PF01026 TatD related DNase YC6258_RS08695 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS08695 PF03707 Bacterial signalling protein N terminal repeat YC6258_RS08695 PF00563 EAL domain YC6258_RS08700 PF01636 Phosphotransferase enzyme family YC6258_RS08725 PF03477 ATP cone domain YC6258_RS08725 PF02867 Ribonucleotide reductase, barrel domain YC6258_RS08725 PF00317 Ribonucleotide reductase, all-alpha domain YC6258_RS08730 PF00268 Ribonucleotide reductase, small chain YC6258_RS08735 PF00111 2Fe-2S iron-sulfur cluster binding domain YC6258_RS08745 PF00005 ABC transporter YC6258_RS08750 PF01032 FecCD transport family YC6258_RS08770 PF03441 FAD binding domain of DNA photolyase YC6258_RS08770 PF00875 DNA photolyase YC6258_RS08775 PF03466 LysR substrate binding domain YC6258_RS08775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS08780 PF01322 Cytochrome C' YC6258_RS08790 PF00682 HMGL-like YC6258_RS08795 PF00132 Bacterial transferase hexapeptide (six repeats) YC6258_RS08805 PF03206 Nitrogen fixation protein NifW YC6258_RS08810 PF04319 NifZ domain YC6258_RS08815 PF00639 PPIC-type PPIASE domain YC6258_RS08820 PF07724 AAA domain (Cdc48 subfamily) YC6258_RS08820 PF10431 C-terminal, D2-small domain, of ClpB protein YC6258_RS08820 PF06689 ClpX C4-type zinc finger YC6258_RS08825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS08825 PF02743 Cache domain YC6258_RS08825 PF00672 HAMP domain YC6258_RS08830 PF00258 Flavodoxin YC6258_RS08835 PF03264 NapC/NirT cytochrome c family, N-terminal region YC6258_RS08845 PF03658 RnfH family Ubiquitin YC6258_RS08850 PF02508 Rnf-Nqr subunit, membrane protein YC6258_RS08855 PF04205 FMN-binding domain YC6258_RS08860 PF03116 NQR2, RnfD, RnfE family YC6258_RS08865 PF13237 4Fe-4S dicluster domain YC6258_RS08865 PF13375 RnfC Barrel sandwich hybrid domain YC6258_RS08865 PF10531 SLBB domain YC6258_RS08865 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit YC6258_RS08870 PF04060 Putative Fe-S cluster YC6258_RS08875 PF02508 Rnf-Nqr subunit, membrane protein YC6258_RS08880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS08880 PF00989 PAS fold YC6258_RS08885 PF02954 Bacterial regulatory protein, Fis family YC6258_RS08885 PF00158 Sigma-54 interaction domain YC6258_RS08885 PF13185 GAF domain YC6258_RS09000 PF01139 tRNA-splicing ligase RtcB YC6258_RS09010 PF07732 Multicopper oxidase YC6258_RS09010 PF00394 Multicopper oxidase YC6258_RS09010 PF07731 Multicopper oxidase YC6258_RS09015 PF02554 Carbon starvation protein CstA YC6258_RS09040 PF00440 Bacterial regulatory proteins, tetR family YC6258_RS09040 PF08359 YsiA-like protein, C-terminal region YC6258_RS09045 PF02525 Flavodoxin-like fold YC6258_RS09055 PF01055 Glycosyl hydrolases family 31 YC6258_RS09055 PF17137 Domain of unknown function (DUF5110) YC6258_RS09055 PF16338 Domain of unknown function (DUF4968) YC6258_RS09060 PF00072 Response regulator receiver domain YC6258_RS09060 PF04397 LytTr DNA-binding domain YC6258_RS09065 PF07694 5TMR of 5TMR-LYT YC6258_RS09065 PF06580 Histidine kinase YC6258_RS09190 PF02954 Bacterial regulatory protein, Fis family YC6258_RS09190 PF01590 GAF domain YC6258_RS09190 PF00158 Sigma-54 interaction domain YC6258_RS09195 PF17912 MalK OB fold domain YC6258_RS09195 PF00005 ABC transporter YC6258_RS09200 PF00005 ABC transporter YC6258_RS09200 PF17912 MalK OB fold domain YC6258_RS09205 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS09210 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS09240 PF00005 ABC transporter YC6258_RS09245 PF13193 AMP-binding enzyme C-terminal domain YC6258_RS09245 PF00501 AMP-binding enzyme YC6258_RS09245 PF00668 Condensation domain YC6258_RS09245 PF00550 Phosphopantetheine attachment site YC6258_RS09250 PF13193 AMP-binding enzyme C-terminal domain YC6258_RS09250 PF00501 AMP-binding enzyme YC6258_RS09250 PF00668 Condensation domain YC6258_RS09250 PF00550 Phosphopantetheine attachment site YC6258_RS09255 PF00550 Phosphopantetheine attachment site YC6258_RS09255 PF00668 Condensation domain YC6258_RS09255 PF13193 AMP-binding enzyme C-terminal domain YC6258_RS09255 PF00975 Thioesterase domain YC6258_RS09255 PF00501 AMP-binding enzyme YC6258_RS09260 PF00501 AMP-binding enzyme YC6258_RS09260 PF00550 Phosphopantetheine attachment site YC6258_RS09260 PF13193 AMP-binding enzyme C-terminal domain YC6258_RS09260 PF00668 Condensation domain YC6258_RS09265 PF00668 Condensation domain YC6258_RS09265 PF00501 AMP-binding enzyme YC6258_RS09265 PF07993 Male sterility protein YC6258_RS09265 PF00550 Phosphopantetheine attachment site YC6258_RS09265 PF13193 AMP-binding enzyme C-terminal domain YC6258_RS09280 PF00975 Thioesterase domain YC6258_RS09280 PF00550 Phosphopantetheine attachment site YC6258_RS09280 PF00668 Condensation domain YC6258_RS09280 PF13193 AMP-binding enzyme C-terminal domain YC6258_RS09280 PF00501 AMP-binding enzyme YC6258_RS09285 PF12706 Beta-lactamase superfamily domain YC6258_RS09285 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain YC6258_RS09300 PF00107 Zinc-binding dehydrogenase YC6258_RS09300 PF08240 Alcohol dehydrogenase GroES-like domain YC6258_RS09310 PF00440 Bacterial regulatory proteins, tetR family YC6258_RS09315 PF02321 Outer membrane efflux protein YC6258_RS09320 PF00529 HlyD membrane-fusion protein of T1SS YC6258_RS09320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YC6258_RS09325 PF07690 Major Facilitator Superfamily YC6258_RS09365 PF01467 Cytidylyltransferase-like YC6258_RS09365 PF00293 NUDIX domain YC6258_RS09405 PF03466 LysR substrate binding domain YC6258_RS09405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS09475 PF00665 Integrase core domain YC6258_RS09480 PF01527 Transposase YC6258_RS09505 PF07488 Glycosyl hydrolase family 67 middle domain YC6258_RS09505 PF07477 Glycosyl hydrolase family 67 C-terminus YC6258_RS09505 PF03648 Glycosyl hydrolase family 67 N-terminus YC6258_RS09525 PF01810 LysE type translocator YC6258_RS09530 PF01370 NAD dependent epimerase/dehydratase family YC6258_RS09545 PF16859 Tetracyclin repressor-like, C-terminal domain YC6258_RS09545 PF00440 Bacterial regulatory proteins, tetR family YC6258_RS09550 PF01252 Signal peptidase (SPase) II YC6258_RS09560 PF00384 Molybdopterin oxidoreductase YC6258_RS09560 PF01568 Molydopterin dinucleotide binding domain YC6258_RS09570 PF01169 Uncharacterized protein family UPF0016 YC6258_RS09575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS09575 PF03466 LysR substrate binding domain YC6258_RS09580 PF03601 Conserved hypothetical protein 698 YC6258_RS09585 PF14497 Glutathione S-transferase, C-terminal domain YC6258_RS09585 PF02798 Glutathione S-transferase, N-terminal domain YC6258_RS09590 PF02678 Pirin YC6258_RS09590 PF05726 Pirin C-terminal cupin domain YC6258_RS09595 PF00149 Calcineurin-like phosphoesterase YC6258_RS09600 PF00398 Ribosomal RNA adenine dimethylase YC6258_RS09605 PF04166 Pyridoxal phosphate biosynthetic protein PdxA YC6258_RS09610 PF09312 SurA N-terminal domain YC6258_RS09610 PF00639 PPIC-type PPIASE domain YC6258_RS09615 PF04453 LPS transport system D YC6258_RS09615 PF03968 OstA-like protein YC6258_RS09620 PF00226 DnaJ domain YC6258_RS09620 PF05099 Tellurite resistance protein TerB YC6258_RS09800 PF00834 Ribulose-phosphate 3 epimerase family YC6258_RS09820 PF00724 NADH:flavin oxidoreductase / NADH oxidase family YC6258_RS09820 PF07992 Pyridine nucleotide-disulphide oxidoreductase YC6258_RS09825 PF00440 Bacterial regulatory proteins, tetR family YC6258_RS09845 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS09850 PF00571 CBS domain YC6258_RS09850 PF00005 ABC transporter YC6258_RS09860 PF00579 tRNA synthetases class I (W and Y) YC6258_RS09880 PF00520 Ion transport protein YC6258_RS09880 PF00027 Cyclic nucleotide-binding domain YC6258_RS09890 PF01966 HD domain YC6258_RS09890 PF12627 Probable RNA and SrmB- binding site of polymerase A YC6258_RS09890 PF01743 Poly A polymerase head domain YC6258_RS09895 PF00034 Cytochrome c YC6258_RS09905 PF03477 ATP cone domain YC6258_RS09910 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region YC6258_RS09910 PF01872 RibD C-terminal domain YC6258_RS09915 PF00677 Lumazine binding domain YC6258_RS09920 PF00925 GTP cyclohydrolase II YC6258_RS09920 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase YC6258_RS09925 PF00885 6,7-dimethyl-8-ribityllumazine synthase YC6258_RS09930 PF01029 NusB family YC6258_RS09935 PF01966 HD domain YC6258_RS09970 PF02424 ApbE family YC6258_RS09980 PF01979 Amidohydrolase family YC6258_RS09985 PF00133 tRNA synthetases class I (I, L, M and V) YC6258_RS09985 PF10458 Valyl tRNA synthetase tRNA binding arm YC6258_RS09985 PF08264 Anticodon-binding domain of tRNA YC6258_RS09990 PF09997 Predicted membrane protein (DUF2238) YC6258_RS10010 PF02567 Phenazine biosynthesis-like protein YC6258_RS10015 PF13419 Haloacid dehalogenase-like hydrolase YC6258_RS10020 PF00156 Phosphoribosyl transferase domain YC6258_RS10025 PF00581 Rhodanese-like domain YC6258_RS10030 PF00107 Zinc-binding dehydrogenase YC6258_RS10030 PF08240 Alcohol dehydrogenase GroES-like domain YC6258_RS10035 PF03167 Uracil DNA glycosylase superfamily YC6258_RS10045 PF00005 ABC transporter YC6258_RS10055 PF01032 FecCD transport family YC6258_RS10060 PF01032 FecCD transport family YC6258_RS10070 PF01497 Periplasmic binding protein YC6258_RS10075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YC6258_RS10075 PF00005 ABC transporter YC6258_RS10080 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS10080 PF12911 N-terminal TM domain of oligopeptide transport permease C YC6258_RS10085 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS10090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YC6258_RS10100 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal YC6258_RS10100 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal YC6258_RS10105 PF00232 Glycosyl hydrolase family 1 YC6258_RS10110 PF07690 Major Facilitator Superfamily YC6258_RS10170 PF00115 Cytochrome C and Quinol oxidase polypeptide I YC6258_RS10175 PF01814 Hemerythrin HHE cation binding domain YC6258_RS10175 PF04405 Domain of Unknown function (DUF542) YC6258_RS10180 PF02954 Bacterial regulatory protein, Fis family YC6258_RS10180 PF00158 Sigma-54 interaction domain YC6258_RS10185 PF17200 Single Cache domain 2 YC6258_RS10185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS10185 PF00672 HAMP domain YC6258_RS10190 PF00672 HAMP domain YC6258_RS10190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS10190 PF12729 Four helix bundle sensory module for signal transduction YC6258_RS10195 PF02525 Flavodoxin-like fold YC6258_RS10200 PF00585 C-terminal regulatory domain of Threonine dehydratase YC6258_RS10200 PF00291 Pyridoxal-phosphate dependent enzyme YC6258_RS10205 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) YC6258_RS10215 PF04073 Aminoacyl-tRNA editing domain YC6258_RS10220 PF13302 Acetyltransferase (GNAT) domain YC6258_RS10230 PF00072 Response regulator receiver domain YC6258_RS10230 PF00486 Transcriptional regulatory protein, C terminal YC6258_RS10235 PF00842 Alanine racemase, C-terminal domain YC6258_RS10235 PF01168 Alanine racemase, N-terminal domain YC6258_RS10240 PF00772 DnaB-like helicase N terminal domain YC6258_RS10240 PF03796 DnaB-like helicase C terminal domain YC6258_RS10245 PF03948 Ribosomal protein L9, C-terminal domain YC6258_RS10245 PF01281 Ribosomal protein L9, N-terminal domain YC6258_RS10255 PF01084 Ribosomal protein S18 YC6258_RS10260 PF01250 Ribosomal protein S6 YC6258_RS10265 PF01435 Peptidase family M48 YC6258_RS10270 PF04011 LemA family YC6258_RS10275 PF08032 RNA 2'-O ribose methyltransferase substrate binding YC6258_RS10275 PF00588 SpoU rRNA Methylase family YC6258_RS10280 PF00773 RNB domain YC6258_RS10280 PF08461 Ribonuclease R winged-helix domain YC6258_RS10280 PF08206 Ribonuclease B OB domain YC6258_RS10280 PF00575 S1 RNA binding domain YC6258_RS10280 PF17876 Cold shock domain YC6258_RS10285 PF00709 Adenylosuccinate synthetase YC6258_RS10290 PF13393 Histidyl-tRNA synthetase YC6258_RS10295 PF01145 SPFH domain / Band 7 family YC6258_RS10300 PF12221 Bacterial membrane protein N terminal YC6258_RS10300 PF01145 SPFH domain / Band 7 family YC6258_RS10305 PF01926 50S ribosome-binding GTPase YC6258_RS10305 PF13167 GTP-binding GTPase N-terminal YC6258_RS10305 PF16360 GTP-binding GTPase Middle Region YC6258_RS10310 PF17209 Hfq protein YC6258_RS10320 PF01119 DNA mismatch repair protein, C-terminal domain YC6258_RS10320 PF08676 MutL C terminal dimerisation domain YC6258_RS10325 PF11741 AMIN domain YC6258_RS10325 PF01520 N-acetylmuramoyl-L-alanine amidase YC6258_RS10330 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE YC6258_RS10335 PF08331 Domain of unknown function (DUF1730) YC6258_RS10340 PF00929 Exonuclease YC6258_RS10350 PF00889 Elongation factor TS YC6258_RS10355 PF02666 Phosphatidylserine decarboxylase YC6258_RS10365 PF00152 tRNA synthetases class II (D, K and N) YC6258_RS10370 PF08207 Elongation factor P (EF-P) KOW-like domain YC6258_RS10370 PF01132 Elongation factor P (EF-P) OB domain YC6258_RS10370 PF09285 Elongation factor P, C-terminal YC6258_RS10375 PF04055 Radical SAM superfamily YC6258_RS10385 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS10385 PF00072 Response regulator receiver domain YC6258_RS10385 PF00563 EAL domain YC6258_RS10390 PF02541 Ppx/GppA phosphatase family YC6258_RS10405 PF03232 Ubiquinone biosynthesis protein COQ7 YC6258_RS10410 PF00072 Response regulator receiver domain YC6258_RS10410 PF01627 Hpt domain YC6258_RS10410 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) YC6258_RS10410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS10410 PF00672 HAMP domain YC6258_RS10410 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS10415 PF02843 Phosphoribosylglycinamide synthetase, C domain YC6258_RS10415 PF02844 Phosphoribosylglycinamide synthetase, N domain YC6258_RS10415 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain YC6258_RS10420 PF02142 MGS-like domain YC6258_RS10420 PF01808 AICARFT/IMPCHase bienzyme YC6258_RS10425 PF02954 Bacterial regulatory protein, Fis family YC6258_RS10430 PF01207 Dihydrouridine synthase (Dus) YC6258_RS10445 PF00289 Biotin carboxylase, N-terminal domain YC6258_RS10445 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain YC6258_RS10445 PF02785 Biotin carboxylase C-terminal domain YC6258_RS10450 PF00364 Biotin-requiring enzyme YC6258_RS10455 PF01220 Dehydroquinase class II YC6258_RS10465 PF00719 Inorganic pyrophosphatase YC6258_RS10475 PF01118 Semialdehyde dehydrogenase, NAD binding domain YC6258_RS10480 PF00478 IMP dehydrogenase / GMP reductase domain YC6258_RS10485 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YC6258_RS10490 PF00582 Universal stress protein family YC6258_RS10500 PF13580 SIS domain YC6258_RS10505 PF02021 Uncharacterised protein family UPF0102 YC6258_RS10510 PF04348 LppC putative lipoprotein YC6258_RS10515 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YC6258_RS10520 PF02381 MraZ protein, putative antitoxin-like YC6258_RS10525 PF01795 MraW methylase family YC6258_RS10535 PF00905 Penicillin binding protein transpeptidase domain YC6258_RS10535 PF03717 Penicillin-binding Protein dimerisation domain YC6258_RS10540 PF02875 Mur ligase family, glutamate ligase domain YC6258_RS10540 PF01225 Mur ligase family, catalytic domain YC6258_RS10540 PF08245 Mur ligase middle domain YC6258_RS10545 PF02875 Mur ligase family, glutamate ligase domain YC6258_RS10545 PF08245 Mur ligase middle domain YC6258_RS10545 PF01225 Mur ligase family, catalytic domain YC6258_RS10550 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 YC6258_RS10550 PF00953 Glycosyl transferase family 4 YC6258_RS10555 PF08245 Mur ligase middle domain YC6258_RS10555 PF02875 Mur ligase family, glutamate ligase domain YC6258_RS10560 PF01098 Cell cycle protein YC6258_RS10565 PF04101 Glycosyltransferase family 28 C-terminal domain YC6258_RS10565 PF03033 Glycosyltransferase family 28 N-terminal domain YC6258_RS10570 PF01225 Mur ligase family, catalytic domain YC6258_RS10570 PF02875 Mur ligase family, glutamate ligase domain YC6258_RS10570 PF08245 Mur ligase middle domain YC6258_RS10575 PF03799 Cell division protein FtsQ YC6258_RS10575 PF08478 POTRA domain, FtsQ-type YC6258_RS10580 PF02491 SHS2 domain inserted in FTSA YC6258_RS10585 PF00091 Tubulin/FtsZ family, GTPase domain YC6258_RS10585 PF12327 FtsZ family, C-terminal domain YC6258_RS10590 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase YC6258_RS10595 PF08525 Opacity-associated protein A N-terminal motif YC6258_RS10595 PF01476 LysM domain YC6258_RS10595 PF01551 Peptidase family M23 YC6258_RS10600 PF07516 SecA Wing and Scaffold domain YC6258_RS10600 PF01043 SecA preprotein cross-linking domain YC6258_RS10600 PF07517 SecA DEAD-like domain YC6258_RS10600 PF02810 SEC-C motif YC6258_RS10605 PF01960 ArgJ family YC6258_RS10610 PF03884 DNA gyrase inhibitor YacG YC6258_RS10615 PF01121 Dephospho-CoA kinase YC6258_RS10620 PF06750 Bacterial Peptidase A24 N-terminal domain YC6258_RS10620 PF01478 Type IV leader peptidase family YC6258_RS10625 PF00482 Type II secretion system (T2SS), protein F YC6258_RS10630 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain YC6258_RS10630 PF00437 Type II/IV secretion system protein YC6258_RS10635 PF07963 Prokaryotic N-terminal methylation motif YC6258_RS10635 PF00114 Pilin (bacterial filament) YC6258_RS10640 PF04932 O-Antigen ligase YC6258_RS10640 PF11846 Virulence factor membrane-bound polymerase, C-terminal YC6258_RS10640 PF15864 Protein glycosylation ligase YC6258_RS10645 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain YC6258_RS10645 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain YC6258_RS10665 PF07992 Pyridine nucleotide-disulphide oxidoreductase YC6258_RS10685 PF00463 Isocitrate lyase family YC6258_RS10700 PF09335 SNARE associated Golgi protein YC6258_RS10705 PF00171 Aldehyde dehydrogenase family YC6258_RS10710 PF01467 Cytidylyltransferase-like YC6258_RS10720 PF02590 Predicted SPOUT methyltransferase YC6258_RS10725 PF00905 Penicillin binding protein transpeptidase domain YC6258_RS10725 PF03717 Penicillin-binding Protein dimerisation domain YC6258_RS10730 PF01098 Cell cycle protein YC6258_RS10735 PF13406 Transglycosylase SLT domain YC6258_RS10740 PF14437 MafB19-like deaminase YC6258_RS10750 PF08323 Starch synthase catalytic domain YC6258_RS10750 PF00534 Glycosyl transferases group 1 YC6258_RS10755 PF00483 Nucleotidyl transferase YC6258_RS10765 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain YC6258_RS10765 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain YC6258_RS10770 PF00462 Glutaredoxin YC6258_RS10775 PF01263 Aldose 1-epimerase YC6258_RS10780 PF00886 Ribosomal protein S16 YC6258_RS10785 PF01782 RimM N-terminal domain YC6258_RS10785 PF05239 PRC-barrel domain YC6258_RS10790 PF01746 tRNA (Guanine-1)-methyltransferase YC6258_RS10795 PF01245 Ribosomal protein L19 YC6258_RS10800 PF10411 Disulfide bond isomerase protein N-terminus YC6258_RS10800 PF13098 Thioredoxin-like domain YC6258_RS10805 PF03447 Homoserine dehydrogenase, NAD binding domain YC6258_RS10805 PF00742 Homoserine dehydrogenase YC6258_RS10805 PF01842 ACT domain YC6258_RS10810 PF14821 Threonine synthase N terminus YC6258_RS10810 PF00291 Pyridoxal-phosphate dependent enzyme YC6258_RS10820 PF00593 TonB dependent receptor YC6258_RS10820 PF07715 TonB-dependent Receptor Plug Domain YC6258_RS10825 PF00313 'Cold-shock' DNA-binding domain YC6258_RS10830 PF00334 Nucleoside diphosphate kinase YC6258_RS10835 PF04055 Radical SAM superfamily YC6258_RS10845 PF04551 GcpE protein YC6258_RS10850 PF13393 Histidyl-tRNA synthetase YC6258_RS10850 PF03129 Anticodon binding domain YC6258_RS10860 PF13360 PQQ-like domain YC6258_RS10865 PF01926 50S ribosome-binding GTPase YC6258_RS10865 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal YC6258_RS10875 PF03466 LysR substrate binding domain YC6258_RS10875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS10880 PF13742 OB-fold nucleic acid binding domain YC6258_RS10880 PF02601 Exonuclease VII, large subunit YC6258_RS10885 PF00478 IMP dehydrogenase / GMP reductase domain YC6258_RS10885 PF00571 CBS domain YC6258_RS10890 PF00958 GMP synthase C terminal domain YC6258_RS10890 PF00117 Glutamine amidotransferase class-I YC6258_RS10890 PF02540 NAD synthase YC6258_RS10895 PF03466 LysR substrate binding domain YC6258_RS10895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS10900 PF02798 Glutathione S-transferase, N-terminal domain YC6258_RS10905 PF00378 Enoyl-CoA hydratase/isomerase YC6258_RS10965 PF03466 LysR substrate binding domain YC6258_RS10965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS10970 PF03330 Lytic transglycolase YC6258_RS10970 PF05036 Sporulation related domain YC6258_RS10975 PF00768 D-alanyl-D-alanine carboxypeptidase YC6258_RS10975 PF07943 Penicillin-binding protein 5, C-terminal domain YC6258_RS10980 PF04359 Protein of unknown function (DUF493) YC6258_RS10985 PF03099 Biotin/lipoate A/B protein ligase family YC6258_RS10990 PF04055 Radical SAM superfamily YC6258_RS10990 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family YC6258_RS11000 PF04287 tRNA pseudouridine synthase C YC6258_RS11005 PF02777 Iron/manganese superoxide dismutases, C-terminal domain YC6258_RS11005 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain YC6258_RS11020 PF00561 alpha/beta hydrolase fold YC6258_RS11025 PF03692 Putative zinc- or iron-chelating domain YC6258_RS11035 PF01571 Aminomethyltransferase folate-binding domain YC6258_RS11040 PF03937 Flavinator of succinate dehydrogenase YC6258_RS11050 PF00890 FAD binding domain YC6258_RS11050 PF02910 Fumarate reductase flavoprotein C-term YC6258_RS11055 PF08281 Sigma-70, region 4 YC6258_RS11055 PF04542 Sigma-70 region 2 YC6258_RS11065 PF03888 MucB/RseB N-terminal domain YC6258_RS11065 PF17188 MucB/RseB C-terminal domain YC6258_RS11075 PF17820 PDZ domain YC6258_RS11075 PF13180 PDZ domain YC6258_RS11080 PF03144 Elongation factor Tu domain 2 YC6258_RS11080 PF00679 Elongation factor G C-terminus YC6258_RS11080 PF00009 Elongation factor Tu GTP binding domain YC6258_RS11080 PF06421 GTP-binding protein LepA C-terminus YC6258_RS11085 PF10502 Signal peptidase, peptidase S26 YC6258_RS11095 PF00035 Double-stranded RNA binding motif YC6258_RS11095 PF14622 Ribonuclease-III-like YC6258_RS11100 PF01926 50S ribosome-binding GTPase YC6258_RS11100 PF07650 KH domain YC6258_RS11105 PF11967 Recombination protein O N terminal YC6258_RS11105 PF02565 Recombination protein O C terminal YC6258_RS11110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS11110 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS11110 PF01627 Hpt domain YC6258_RS11110 PF00072 Response regulator receiver domain YC6258_RS11110 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) YC6258_RS11110 PF00672 HAMP domain YC6258_RS11115 PF00291 Pyridoxal-phosphate dependent enzyme YC6258_RS11120 PF05958 tRNA (Uracil-5-)-methyltransferase YC6258_RS11120 PF01938 TRAM domain YC6258_RS11125 PF02824 TGS domain YC6258_RS11125 PF04607 Region found in RelA / SpoT proteins YC6258_RS11125 PF13291 ACT domain YC6258_RS11130 PF03819 MazG nucleotide pyrophosphohydrolase domain YC6258_RS11135 PF03471 Transporter associated domain YC6258_RS11135 PF00571 CBS domain YC6258_RS11140 PF02130 Uncharacterized protein family UPF0054 YC6258_RS11145 PF02562 PhoH-like protein YC6258_RS11150 PF00919 Uncharacterized protein family UPF0004 YC6258_RS11150 PF04055 Radical SAM superfamily YC6258_RS11150 PF01938 TRAM domain YC6258_RS11190 PF04073 Aminoacyl-tRNA editing domain YC6258_RS11190 PF03129 Anticodon binding domain YC6258_RS11190 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) YC6258_RS11200 PF01551 Peptidase family M23 YC6258_RS11200 PF01476 LysM domain YC6258_RS11205 PF04545 Sigma-70, region 4 YC6258_RS11205 PF04542 Sigma-70 region 2 YC6258_RS11205 PF04539 Sigma-70 region 3 YC6258_RS11205 PF00140 Sigma-70 factor, region 1.2 YC6258_RS11210 PF11953 Domain of unknown function (DUF3470) YC6258_RS11210 PF00037 4Fe-4S binding domain YC6258_RS11215 PF05190 MutS family domain IV YC6258_RS11215 PF05192 MutS domain III YC6258_RS11215 PF05188 MutS domain II YC6258_RS11215 PF01624 MutS domain I YC6258_RS11215 PF00488 MutS domain V YC6258_RS11220 PF02464 Competence-damaged protein YC6258_RS11225 PF00154 recA bacterial DNA recombination protein YC6258_RS11230 PF02631 RecX family YC6258_RS11235 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain YC6258_RS11235 PF04616 Glycosyl hydrolases family 43 YC6258_RS11240 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS11245 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS11260 PF02272 DHHA1 domain YC6258_RS11260 PF01411 tRNA synthetases class II (A) YC6258_RS11260 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain YC6258_RS11265 PF01842 ACT domain YC6258_RS11265 PF13840 ACT domain YC6258_RS11265 PF00696 Amino acid kinase family YC6258_RS11270 PF02599 Global regulator protein family YC6258_RS11290 PF01207 Dihydrouridine synthase (Dus) YC6258_RS11300 PF00682 HMGL-like YC6258_RS11300 PF02436 Conserved carboxylase domain YC6258_RS11300 PF00364 Biotin-requiring enzyme YC6258_RS11305 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit YC6258_RS11340 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component YC6258_RS11360 PF01926 50S ribosome-binding GTPase YC6258_RS11365 PF00850 Histone deacetylase domain YC6258_RS11370 PF00583 Acetyltransferase (GNAT) family YC6258_RS11370 PF13380 CoA binding domain YC6258_RS11370 PF13607 Succinyl-CoA ligase like flavodoxin domain YC6258_RS11375 PF09297 NADH pyrophosphatase zinc ribbon domain YC6258_RS11375 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain YC6258_RS11375 PF00293 NUDIX domain YC6258_RS11385 PF00325 Bacterial regulatory proteins, crp family YC6258_RS11385 PF00027 Cyclic nucleotide-binding domain YC6258_RS11390 PF01171 PP-loop family YC6258_RS11410 PF03597 Cytochrome oxidase maturation protein cbb3-type YC6258_RS11415 PF00403 Heavy-metal-associated domain YC6258_RS11425 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase YC6258_RS11425 PF12801 4Fe-4S binding domain YC6258_RS11425 PF13746 4Fe-4S dicluster domain YC6258_RS11430 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP YC6258_RS11430 PF13442 Cytochrome C oxidase, cbb3-type, subunit III YC6258_RS11445 PF00115 Cytochrome C and Quinol oxidase polypeptide I YC6258_RS11460 PF00216 Bacterial DNA-binding protein YC6258_RS11465 PF00152 tRNA synthetases class II (D, K and N) YC6258_RS11465 PF01336 OB-fold nucleic acid binding domain YC6258_RS11465 PF02938 GAD domain YC6258_RS11470 PF01709 Transcriptional regulator YC6258_RS11475 PF02075 Crossover junction endodeoxyribonuclease RuvC YC6258_RS11480 PF01330 RuvA N terminal domain YC6258_RS11480 PF07499 RuvA, C-terminal domain YC6258_RS11485 PF05496 Holliday junction DNA helicase RuvB P-loop domain YC6258_RS11485 PF05491 RuvB C-terminal winged helix domain YC6258_RS11485 PF17864 RuvB AAA lid domain YC6258_RS11490 PF03061 Thioesterase superfamily YC6258_RS11495 PF01618 MotA/TolQ/ExbB proton channel family YC6258_RS11500 PF02472 Biopolymer transport protein ExbD/TolR YC6258_RS11510 PF04052 TolB amino-terminal domain YC6258_RS11510 PF07676 WD40-like Beta Propeller Repeat YC6258_RS11515 PF00691 OmpA family YC6258_RS11520 PF16331 TolA binding protein trimerisation YC6258_RS11520 PF13174 Tetratricopeptide repeat YC6258_RS11525 PF06508 Queuosine biosynthesis protein QueC YC6258_RS11540 PF02445 Quinolinate synthetase A protein YC6258_RS11545 PF01435 Peptidase family M48 YC6258_RS11550 PF01206 Sulfurtransferase TusA YC6258_RS11555 PF01594 AI-2E family transporter YC6258_RS11560 PF00578 AhpC/TSA family YC6258_RS11565 PF00701 Dihydrodipicolinate synthetase family YC6258_RS11575 PF12706 Beta-lactamase superfamily domain YC6258_RS11575 PF03099 Biotin/lipoate A/B protein ligase family YC6258_RS11580 PF01259 SAICAR synthetase YC6258_RS11595 PF01256 Carbohydrate kinase YC6258_RS11595 PF03853 YjeF-related protein N-terminus YC6258_RS11605 PF03176 MMPL family YC6258_RS11605 PF12823 Domain of unknown function (DUF3817) YC6258_RS11610 PF08443 RimK-like ATP-grasp domain YC6258_RS11610 PF18030 RimK PreATP-grasp domain YC6258_RS11625 PF01515 Phosphate acetyl/butaryl transferase YC6258_RS11625 PF07085 DRTGG domain YC6258_RS11630 PF00871 Acetokinase family YC6258_RS11645 PF00005 ABC transporter YC6258_RS11645 PF12399 Branched-chain amino acid ATP-binding cassette transporter YC6258_RS11650 PF00005 ABC transporter YC6258_RS11655 PF02653 Branched-chain amino acid transport system / permease component YC6258_RS11675 PF00109 Beta-ketoacyl synthase, N-terminal domain YC6258_RS11675 PF02801 Beta-ketoacyl synthase, C-terminal domain YC6258_RS11680 PF07977 FabA-like domain YC6258_RS11685 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component YC6258_RS11695 PF03480 Bacterial extracellular solute-binding protein, family 7 YC6258_RS11710 PF13609 Gram-negative porin YC6258_RS11715 PF02233 NAD(P) transhydrogenase beta subunit YC6258_RS11720 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch YC6258_RS11720 PF01262 Alanine dehydrogenase/PNT, C-terminal domain YC6258_RS11720 PF05222 Alanine dehydrogenase/PNT, N-terminal domain YC6258_RS11725 PF14602 Hexapeptide repeat of succinyl-transferase YC6258_RS11725 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle YC6258_RS11730 PF03960 ArsC family YC6258_RS11735 PF00155 Aminotransferase class I and II YC6258_RS11740 PF01966 HD domain YC6258_RS11740 PF01909 Nucleotidyltransferase domain YC6258_RS11740 PF08335 GlnD PII-uridylyltransferase YC6258_RS11740 PF01842 ACT domain YC6258_RS11745 PF00557 Metallopeptidase family M24 YC6258_RS11750 PF00318 Ribosomal protein S2 YC6258_RS11755 PF00889 Elongation factor TS YC6258_RS11760 PF00696 Amino acid kinase family YC6258_RS11765 PF01765 Ribosome recycling factor YC6258_RS11770 PF01255 Putative undecaprenyl diphosphate synthase YC6258_RS11780 PF13288 DXP reductoisomerase C-terminal domain YC6258_RS11780 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain YC6258_RS11780 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase YC6258_RS11785 PF02163 Peptidase family M50 YC6258_RS11785 PF13180 PDZ domain YC6258_RS11785 PF17820 PDZ domain YC6258_RS11790 PF07244 Surface antigen variable number repeat YC6258_RS11790 PF01103 Surface antigen YC6258_RS11795 PF03938 Outer membrane protein (OmpH-like) YC6258_RS11800 PF00132 Bacterial transferase hexapeptide (six repeats) YC6258_RS11800 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD YC6258_RS11805 PF07977 FabA-like domain YC6258_RS11810 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 YC6258_RS11810 PF00132 Bacterial transferase hexapeptide (six repeats) YC6258_RS11815 PF02684 Lipid-A-disaccharide synthetase YC6258_RS11820 PF01351 Ribonuclease HII YC6258_RS11825 PF14579 Helix-hairpin-helix motif YC6258_RS11825 PF07733 Bacterial DNA polymerase III alpha NTPase domain YC6258_RS11825 PF01336 OB-fold nucleic acid binding domain YC6258_RS11825 PF02811 PHP domain YC6258_RS11825 PF17657 Bacterial DNA polymerase III alpha subunit finger domain YC6258_RS11830 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit YC6258_RS11840 PF11734 TilS substrate C-terminal domain YC6258_RS11840 PF09179 TilS substrate binding domain YC6258_RS11840 PF01171 PP-loop family YC6258_RS11845 PF00117 Glutamine amidotransferase class-I YC6258_RS11845 PF06418 CTP synthase N-terminus YC6258_RS11850 PF03952 Enolase, N-terminal domain YC6258_RS11850 PF00113 Enolase, C-terminal TIM barrel domain YC6258_RS11865 PF00563 EAL domain YC6258_RS11865 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS11865 PF03707 Bacterial signalling protein N terminal repeat YC6258_RS11870 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS11870 PF00497 Bacterial extracellular solute-binding proteins, family 3 YC6258_RS11870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS11880 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YC6258_RS11880 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YC6258_RS11895 PF00285 Citrate synthase, C-terminal domain YC6258_RS11900 PF03972 MmgE/PrpD family YC6258_RS11915 PF12848 ABC transporter YC6258_RS11915 PF00005 ABC transporter YC6258_RS11920 PF13302 Acetyltransferase (GNAT) domain YC6258_RS11940 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain YC6258_RS11940 PF07685 CobB/CobQ-like glutamine amidotransferase domain YC6258_RS11950 PF12557 Cob(I)alamin adenosyltransferase N terminal YC6258_RS11950 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP YC6258_RS11965 PF00171 Aldehyde dehydrogenase family YC6258_RS11975 PF00392 Bacterial regulatory proteins, gntR family YC6258_RS11975 PF00155 Aminotransferase class I and II YC6258_RS11985 PF04151 Bacterial pre-peptidase C-terminal domain YC6258_RS11985 PF04389 Peptidase family M28 YC6258_RS11995 PF00578 AhpC/TSA family YC6258_RS12000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS12000 PF03466 LysR substrate binding domain YC6258_RS12020 PF13193 AMP-binding enzyme C-terminal domain YC6258_RS12020 PF00668 Condensation domain YC6258_RS12020 PF00550 Phosphopantetheine attachment site YC6258_RS12020 PF00501 AMP-binding enzyme YC6258_RS12025 PF03621 MbtH-like protein YC6258_RS12030 PF00756 Putative esterase YC6258_RS12030 PF11806 Domain of unknown function (DUF3327) YC6258_RS12035 PF07715 TonB-dependent Receptor Plug Domain YC6258_RS12075 PF03527 RHS protein YC6258_RS12100 PF03527 RHS protein YC6258_RS12115 PF03527 RHS protein YC6258_RS12180 PF00905 Penicillin binding protein transpeptidase domain YC6258_RS12240 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) YC6258_RS12240 PF12708 Pectate lyase superfamily protein YC6258_RS12240 PF13229 Right handed beta helix region YC6258_RS12260 PF00117 Glutamine amidotransferase class-I YC6258_RS12260 PF06418 CTP synthase N-terminus YC6258_RS12280 PF05675 Protein of unknown function (DUF817) YC6258_RS12290 PF00356 Bacterial regulatory proteins, lacI family YC6258_RS12300 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS12310 PF08402 TOBE domain YC6258_RS12310 PF00005 ABC transporter YC6258_RS12315 PF00149 Calcineurin-like phosphoesterase YC6258_RS12335 PF00857 Isochorismatase family YC6258_RS12335 PF00550 Phosphopantetheine attachment site YC6258_RS12340 PF00501 AMP-binding enzyme YC6258_RS12340 PF13193 AMP-binding enzyme C-terminal domain YC6258_RS12345 PF00425 chorismate binding enzyme YC6258_RS12350 PF01497 Periplasmic binding protein YC6258_RS12365 PF07729 FCD domain YC6258_RS12365 PF00392 Bacterial regulatory proteins, gntR family YC6258_RS12370 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component YC6258_RS12375 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component YC6258_RS12380 PF03480 Bacterial extracellular solute-binding protein, family 7 YC6258_RS12385 PF02614 Glucuronate isomerase YC6258_RS12390 PF01232 Mannitol dehydrogenase Rossmann domain YC6258_RS12390 PF08125 Mannitol dehydrogenase C-terminal domain YC6258_RS12395 PF08666 SAF domain YC6258_RS12395 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus YC6258_RS12400 PF10688 Bacterial inner membrane protein YC6258_RS12475 PF00013 KH domain YC6258_RS12475 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain YC6258_RS12475 PF01138 3' exoribonuclease family, domain 1 YC6258_RS12475 PF03725 3' exoribonuclease family, domain 2 YC6258_RS12475 PF00575 S1 RNA binding domain YC6258_RS12535 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YC6258_RS12650 PF00106 short chain dehydrogenase YC6258_RS12655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS12655 PF03466 LysR substrate binding domain YC6258_RS12660 PF07516 SecA Wing and Scaffold domain YC6258_RS12660 PF02810 SEC-C motif YC6258_RS12660 PF07517 SecA DEAD-like domain YC6258_RS12660 PF01043 SecA preprotein cross-linking domain YC6258_RS12665 PF01609 Transposase DDE domain YC6258_RS12665 PF05598 Transposase domain (DUF772) YC6258_RS12705 PF01409 tRNA synthetases class II core domain (F) YC6258_RS12705 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain YC6258_RS12715 PF03960 ArsC family YC6258_RS12720 PF01810 LysE type translocator YC6258_RS12725 PF00148 Nitrogenase component 1 type Oxidoreductase YC6258_RS12730 PF00148 Nitrogenase component 1 type Oxidoreductase YC6258_RS12735 PF02579 Dinitrogenase iron-molybdenum cofactor YC6258_RS12740 PF03270 Protein of unknown function, DUF269 YC6258_RS12750 PF12838 4Fe-4S dicluster domain YC6258_RS12770 PF00672 HAMP domain YC6258_RS12770 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) YC6258_RS12770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS12770 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS12770 PF01627 Hpt domain YC6258_RS12770 PF00072 Response regulator receiver domain YC6258_RS12790 PF00501 AMP-binding enzyme YC6258_RS12790 PF13193 AMP-binding enzyme C-terminal domain YC6258_RS12795 PF00005 ABC transporter YC6258_RS12800 PF01032 FecCD transport family YC6258_RS12810 PF05171 Haemin-degrading HemS.ChuX domain YC6258_RS12815 PF00593 TonB dependent receptor YC6258_RS12815 PF07715 TonB-dependent Receptor Plug Domain YC6258_RS12825 PF01435 Peptidase family M48 YC6258_RS12825 PF07720 Tetratricopeptide repeat YC6258_RS12835 PF08713 DNA alkylation repair enzyme YC6258_RS12855 PF01817 Chorismate mutase type II YC6258_RS12860 PF00005 ABC transporter YC6258_RS12865 PF01032 FecCD transport family YC6258_RS12870 PF01032 FecCD transport family YC6258_RS12875 PF05977 Transmembrane secretion effector YC6258_RS12890 PF02142 MGS-like domain YC6258_RS12905 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase YC6258_RS12905 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YC6258_RS12915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS12915 PF00672 HAMP domain YC6258_RS12940 PF01554 MatE YC6258_RS12945 PF04315 Elongation factor P hydroxylase YC6258_RS12950 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase YC6258_RS12950 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase YC6258_RS12955 PF00270 DEAD/DEAH box helicase YC6258_RS12955 PF00271 Helicase conserved C-terminal domain YC6258_RS12960 PF01612 3'-5' exonuclease YC6258_RS12960 PF00476 DNA polymerase family A YC6258_RS12960 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain YC6258_RS12960 PF01367 5'-3' exonuclease, C-terminal SAM fold YC6258_RS12965 PF11890 Domain of unknown function (DUF3410) YC6258_RS12965 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YC6258_RS12965 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YC6258_RS12980 PF00155 Aminotransferase class I and II YC6258_RS12985 PF01641 SelR domain YC6258_RS13005 PF00483 Nucleotidyl transferase YC6258_RS13020 PF04304 Protein of unknown function (DUF454) YC6258_RS13025 PF00364 Biotin-requiring enzyme YC6258_RS13025 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) YC6258_RS13025 PF02817 e3 binding domain YC6258_RS13030 PF00456 Transketolase, thiamine diphosphate binding domain YC6258_RS13030 PF17831 Pyruvate dehydrogenase E1 component middle domain YC6258_RS13035 PF00224 Pyruvate kinase, barrel domain YC6258_RS13035 PF02887 Pyruvate kinase, alpha/beta domain YC6258_RS13040 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain YC6258_RS13040 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain YC6258_RS13045 PF01380 SIS domain YC6258_RS13045 PF01418 Helix-turn-helix domain, rpiR family YC6258_RS13050 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain YC6258_RS13050 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain YC6258_RS13055 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase YC6258_RS13060 PF00920 Dehydratase family YC6258_RS13065 PF02685 Glucokinase YC6258_RS13070 PF01081 KDPG and KHG aldolase YC6258_RS13080 PF02446 4-alpha-glucanotransferase YC6258_RS13085 PF00005 ABC transporter YC6258_RS13085 PF17912 MalK OB fold domain YC6258_RS13095 PF08338 Domain of unknown function (DUF1731) YC6258_RS13095 PF01370 NAD dependent epimerase/dehydratase family YC6258_RS13100 PF00005 ABC transporter YC6258_RS13105 PF01061 ABC-2 type transporter YC6258_RS13110 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term YC6258_RS13110 PF14489 QueF-like protein YC6258_RS13115 PF00211 Adenylate and Guanylate cyclase catalytic domain YC6258_RS13120 PF00012 Hsp70 protein YC6258_RS13125 PF01037 Lrp/AsnC ligand binding domain YC6258_RS13145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS13150 PF00330 Aconitase family (aconitate hydratase) YC6258_RS13155 PF00694 Aconitase C-terminal domain YC6258_RS13160 PF00180 Isocitrate/isopropylmalate dehydrogenase YC6258_RS13165 PF01118 Semialdehyde dehydrogenase, NAD binding domain YC6258_RS13165 PF02774 Semialdehyde dehydrogenase, dimerisation domain YC6258_RS13175 PF01416 tRNA pseudouridine synthase YC6258_RS13180 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase YC6258_RS13185 PF00291 Pyridoxal-phosphate dependent enzyme YC6258_RS13190 PF00290 Tryptophan synthase alpha chain YC6258_RS13195 PF01039 Carboxyl transferase domain YC6258_RS13195 PF17848 Acetyl-coA carboxylase zinc finger domain YC6258_RS13200 PF08245 Mur ligase middle domain YC6258_RS13200 PF02875 Mur ligase family, glutamate ligase domain YC6258_RS13210 PF02674 Colicin V production protein YC6258_RS13215 PF00156 Phosphoribosyl transferase domain YC6258_RS13225 PF07726 ATPase family associated with various cellular activities (AAA) YC6258_RS13225 PF17863 AAA lid domain YC6258_RS13235 PF11992 Domain of unknown function (DUF3488) YC6258_RS13235 PF13559 Domain of unknown function (DUF4129) YC6258_RS13235 PF01841 Transglutaminase-like superfamily YC6258_RS13240 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain YC6258_RS13240 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain YC6258_RS13245 PF02333 Phytase YC6258_RS13260 PF00749 tRNA synthetases class I (E and Q), catalytic domain YC6258_RS13275 PF03664 Glycosyl hydrolase family 62 YC6258_RS13275 PF03422 Carbohydrate binding module (family 6) YC6258_RS13275 PF00553 Cellulose binding domain YC6258_RS13280 PF02903 Alpha amylase, N-terminal ig-like domain YC6258_RS13280 PF00128 Alpha amylase, catalytic domain YC6258_RS13320 PF02417 Chromate transporter YC6258_RS13330 PF00293 NUDIX domain YC6258_RS13335 PF00106 short chain dehydrogenase YC6258_RS13365 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS13365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS13370 PF00486 Transcriptional regulatory protein, C terminal YC6258_RS13370 PF00072 Response regulator receiver domain YC6258_RS13385 PF14600 Cellulose-binding domain YC6258_RS13385 PF00150 Cellulase (glycosyl hydrolase family 5) YC6258_RS13390 PF03707 Bacterial signalling protein N terminal repeat YC6258_RS13390 PF00563 EAL domain YC6258_RS13390 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS13395 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS13395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS13395 PF01627 Hpt domain YC6258_RS13395 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) YC6258_RS13395 PF00072 Response regulator receiver domain YC6258_RS13395 PF00672 HAMP domain YC6258_RS13435 PF17912 MalK OB fold domain YC6258_RS13435 PF00005 ABC transporter YC6258_RS13440 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS13445 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS13450 PF00356 Bacterial regulatory proteins, lacI family YC6258_RS13460 PF16499 Alpha galactosidase A YC6258_RS13460 PF17801 Alpha galactosidase C-terminal beta sandwich domain YC6258_RS13470 PF13673 Acetyltransferase (GNAT) domain YC6258_RS13470 PF04229 GrpB protein YC6258_RS13475 PF03466 LysR substrate binding domain YC6258_RS13475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS13480 PF01547 Bacterial extracellular solute-binding protein YC6258_RS13485 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS13490 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS13495 PF00128 Alpha amylase, catalytic domain YC6258_RS13500 PF16901 C-terminal domain of alpha-glycerophosphate oxidase YC6258_RS13500 PF01266 FAD dependent oxidoreductase YC6258_RS13505 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YC6258_RS13505 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YC6258_RS13510 PF05025 RbsD / FucU transport protein family YC6258_RS13515 PF00005 ABC transporter YC6258_RS13520 PF02653 Branched-chain amino acid transport system / permease component YC6258_RS13525 PF13407 Periplasmic binding protein domain YC6258_RS13530 PF00294 pfkB family carbohydrate kinase YC6258_RS13535 PF00356 Bacterial regulatory proteins, lacI family YC6258_RS13545 PF02798 Glutathione S-transferase, N-terminal domain YC6258_RS13545 PF00043 Glutathione S-transferase, C-terminal domain YC6258_RS13595 PF01925 Sulfite exporter TauE/SafE YC6258_RS13605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS13605 PF03466 LysR substrate binding domain YC6258_RS13640 PF00378 Enoyl-CoA hydratase/isomerase YC6258_RS13645 PF00378 Enoyl-CoA hydratase/isomerase YC6258_RS13650 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal YC6258_RS13650 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal YC6258_RS13655 PF00550 Phosphopantetheine attachment site YC6258_RS13655 PF00501 AMP-binding enzyme YC6258_RS13655 PF13193 AMP-binding enzyme C-terminal domain YC6258_RS13655 PF14765 Polyketide synthase dehydratase YC6258_RS13655 PF16197 Ketoacyl-synthetase C-terminal extension YC6258_RS13655 PF00109 Beta-ketoacyl synthase, N-terminal domain YC6258_RS13655 PF02801 Beta-ketoacyl synthase, C-terminal domain YC6258_RS13655 PF08659 KR domain YC6258_RS13655 PF00668 Condensation domain YC6258_RS13660 PF08659 KR domain YC6258_RS13660 PF00550 Phosphopantetheine attachment site YC6258_RS13660 PF14765 Polyketide synthase dehydratase YC6258_RS13660 PF16197 Ketoacyl-synthetase C-terminal extension YC6258_RS13660 PF00109 Beta-ketoacyl synthase, N-terminal domain YC6258_RS13660 PF02801 Beta-ketoacyl synthase, C-terminal domain YC6258_RS13670 PF00109 Beta-ketoacyl synthase, N-terminal domain YC6258_RS13670 PF13193 AMP-binding enzyme C-terminal domain YC6258_RS13670 PF00668 Condensation domain YC6258_RS13670 PF16197 Ketoacyl-synthetase C-terminal extension YC6258_RS13670 PF08659 KR domain YC6258_RS13670 PF00550 Phosphopantetheine attachment site YC6258_RS13670 PF14765 Polyketide synthase dehydratase YC6258_RS13670 PF02801 Beta-ketoacyl synthase, C-terminal domain YC6258_RS13670 PF00501 AMP-binding enzyme YC6258_RS13675 PF08659 KR domain YC6258_RS13675 PF00550 Phosphopantetheine attachment site YC6258_RS13675 PF14765 Polyketide synthase dehydratase YC6258_RS13675 PF16197 Ketoacyl-synthetase C-terminal extension YC6258_RS13675 PF00109 Beta-ketoacyl synthase, N-terminal domain YC6258_RS13675 PF02801 Beta-ketoacyl synthase, C-terminal domain YC6258_RS13680 PF03055 Retinal pigment epithelial membrane protein YC6258_RS13690 PF00067 Cytochrome P450 YC6258_RS13695 PF00550 Phosphopantetheine attachment site YC6258_RS13700 PF00109 Beta-ketoacyl synthase, N-terminal domain YC6258_RS13700 PF02801 Beta-ketoacyl synthase, C-terminal domain YC6258_RS13715 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family YC6258_RS13715 PF00356 Bacterial regulatory proteins, lacI family YC6258_RS13720 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YC6258_RS13720 PF02896 PEP-utilising enzyme, TIM barrel domain YC6258_RS13720 PF05524 PEP-utilising enzyme, N-terminal YC6258_RS13720 PF00381 PTS HPr component phosphorylation site YC6258_RS13720 PF00391 PEP-utilising enzyme, mobile domain YC6258_RS13725 PF00294 pfkB family carbohydrate kinase YC6258_RS13730 PF02378 Phosphotransferase system, EIIC YC6258_RS13730 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit YC6258_RS13735 PF05230 MASE2 domain YC6258_RS13735 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS13740 PF00583 Acetyltransferase (GNAT) family YC6258_RS13745 PF00202 Aminotransferase class-III YC6258_RS13750 PF06339 Ectoine synthase YC6258_RS13755 PF05721 Phytanoyl-CoA dioxygenase (PhyH) YC6258_RS13760 PF13840 ACT domain YC6258_RS13760 PF00696 Amino acid kinase family YC6258_RS13775 PF01047 MarR family YC6258_RS13780 PF00255 Glutathione peroxidase YC6258_RS13785 PF07969 Amidohydrolase family YC6258_RS13790 PF01810 LysE type translocator YC6258_RS13795 PF03707 Bacterial signalling protein N terminal repeat YC6258_RS13795 PF00563 EAL domain YC6258_RS13795 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS13810 PF02896 PEP-utilising enzyme, TIM barrel domain YC6258_RS13810 PF01590 GAF domain YC6258_RS13810 PF00391 PEP-utilising enzyme, mobile domain YC6258_RS13810 PF05524 PEP-utilising enzyme, N-terminal YC6258_RS13820 PF12843 Putative quorum-sensing-regulated virulence factor YC6258_RS13825 PF00155 Aminotransferase class I and II YC6258_RS13850 PF09339 IclR helix-turn-helix domain YC6258_RS13850 PF01614 Bacterial transcriptional regulator YC6258_RS13860 PF04357 TamB, inner membrane protein subunit of TAM complex YC6258_RS13865 PF17243 POTRA domain TamA domain 1 YC6258_RS13865 PF01103 Surface antigen YC6258_RS13865 PF07244 Surface antigen variable number repeat YC6258_RS13870 PF03350 Uncharacterized protein family, UPF0114 YC6258_RS13875 PF00582 Universal stress protein family YC6258_RS13895 PF00072 Response regulator receiver domain YC6258_RS13900 PF04344 Chemotaxis phosphatase, CheZ YC6258_RS13905 PF00072 Response regulator receiver domain YC6258_RS13905 PF01627 Hpt domain YC6258_RS13905 PF01584 CheW-like domain YC6258_RS13905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS13905 PF02895 Signal transducing histidine kinase, homodimeric domain YC6258_RS13910 PF01339 CheB methylesterase YC6258_RS13910 PF00072 Response regulator receiver domain YC6258_RS13915 PF01618 MotA/TolQ/ExbB proton channel family YC6258_RS13920 PF00691 OmpA family YC6258_RS13920 PF13677 Membrane MotB of proton-channel complex MotA/MotB YC6258_RS13925 PF13614 AAA domain YC6258_RS13940 PF01584 CheW-like domain YC6258_RS13950 PF04333 MlaA lipoprotein YC6258_RS13960 PF00072 Response regulator receiver domain YC6258_RS13970 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus YC6258_RS13970 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus YC6258_RS13980 PF00300 Histidine phosphatase superfamily (branch 1) YC6258_RS13985 PF00561 alpha/beta hydrolase fold YC6258_RS13995 PF05175 Methyltransferase small domain YC6258_RS14000 PF01264 Chorismate synthase YC6258_RS14005 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain YC6258_RS14010 PF01575 MaoC like domain YC6258_RS14020 PF16916 Dimerisation domain of Zinc Transporter YC6258_RS14020 PF01545 Cation efflux family YC6258_RS14025 PF00588 SpoU rRNA Methylase family YC6258_RS14025 PF12105 SpoU, rRNA methylase, C-terminal YC6258_RS14030 PF02801 Beta-ketoacyl synthase, C-terminal domain YC6258_RS14030 PF00109 Beta-ketoacyl synthase, N-terminal domain YC6258_RS14035 PF12833 Helix-turn-helix domain YC6258_RS14035 PF12852 Cupin YC6258_RS14045 PF03358 NADPH-dependent FMN reductase YC6258_RS14050 PF03960 ArsC family YC6258_RS14055 PF03631 Virulence factor BrkB YC6258_RS14060 PF00132 Bacterial transferase hexapeptide (six repeats) YC6258_RS14095 PF01722 BolA-like protein YC6258_RS14110 PF02824 TGS domain YC6258_RS14110 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain YC6258_RS14110 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) YC6258_RS14110 PF03129 Anticodon binding domain YC6258_RS14115 PF05198 Translation initiation factor IF-3, N-terminal domain YC6258_RS14115 PF00707 Translation initiation factor IF-3, C-terminal domain YC6258_RS14120 PF01632 Ribosomal protein L35 YC6258_RS14125 PF00453 Ribosomal protein L20 YC6258_RS14130 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain YC6258_RS14130 PF01409 tRNA synthetases class II core domain (F) YC6258_RS14135 PF03484 tRNA synthetase B5 domain YC6258_RS14135 PF03483 B3/4 domain YC6258_RS14135 PF01588 Putative tRNA binding domain YC6258_RS14135 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain YC6258_RS14135 PF03147 Ferredoxin-fold anticodon binding domain YC6258_RS14140 PF00216 Bacterial DNA-binding protein YC6258_RS14160 PF08281 Sigma-70, region 4 YC6258_RS14160 PF04542 Sigma-70 region 2 YC6258_RS14180 PF01077 Nitrite and sulphite reductase 4Fe-4S domain YC6258_RS14180 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain YC6258_RS14200 PF01979 Amidohydrolase family YC6258_RS14205 PF00221 Aromatic amino acid lyase YC6258_RS14210 PF17392 Urocanase C-terminal domain YC6258_RS14210 PF17391 Urocanase N-terminal domain YC6258_RS14210 PF01175 Urocanase Rossmann-like domain YC6258_RS14215 PF07702 UTRA domain YC6258_RS14215 PF00392 Bacterial regulatory proteins, gntR family YC6258_RS14220 PF01979 Amidohydrolase family YC6258_RS14225 PF01709 Transcriptional regulator YC6258_RS14235 PF01053 Cys/Met metabolism PLP-dependent enzyme YC6258_RS14240 PF06917 Periplasmic pectate lyase YC6258_RS14245 PF00141 Peroxidase YC6258_RS14250 PF00149 Calcineurin-like phosphoesterase YC6258_RS14250 PF12320 Type 5 capsule protein repressor C-terminal domain YC6258_RS14255 PF13476 AAA domain YC6258_RS14260 PF00809 Pterin binding enzyme YC6258_RS14260 PF02574 Homocysteine S-methyltransferase YC6258_RS14260 PF02607 B12 binding domain YC6258_RS14260 PF02310 B12 binding domain YC6258_RS14260 PF02965 Vitamin B12 dependent methionine synthase, activation domain YC6258_RS14265 PF01521 Iron-sulphur cluster biosynthesis YC6258_RS14265 PF01106 NifU-like domain YC6258_RS14270 PF00684 DnaJ central domain YC6258_RS14270 PF00226 DnaJ domain YC6258_RS14270 PF01556 DnaJ C terminal domain YC6258_RS14280 PF01513 ATP-NAD kinase YC6258_RS14295 PF17432 Domain of unknown function (DUF3458_C) ARM repeats YC6258_RS14295 PF01433 Peptidase family M1 domain YC6258_RS14295 PF11940 Domain of unknown function (DUF3458) Ig-like fold YC6258_RS14300 PF04957 Ribosome modulation factor YC6258_RS14305 PF01226 Formate/nitrite transporter YC6258_RS14310 PF00295 Glycosyl hydrolases family 28 YC6258_RS14320 PF00698 Acyl transferase domain YC6258_RS14320 PF16197 Ketoacyl-synthetase C-terminal extension YC6258_RS14320 PF00109 Beta-ketoacyl synthase, N-terminal domain YC6258_RS14320 PF02801 Beta-ketoacyl synthase, C-terminal domain YC6258_RS14320 PF08659 KR domain YC6258_RS14320 PF00550 Phosphopantetheine attachment site YC6258_RS14320 PF14765 Polyketide synthase dehydratase YC6258_RS14325 PF01593 Flavin containing amine oxidoreductase YC6258_RS14330 PF01593 Flavin containing amine oxidoreductase YC6258_RS14335 PF00975 Thioesterase domain YC6258_RS14345 PF06144 DNA polymerase III, delta subunit YC6258_RS14345 PF14840 Processivity clamp loader gamma complex DNA pol III C-term YC6258_RS14355 PF00133 tRNA synthetases class I (I, L, M and V) YC6258_RS14355 PF08264 Anticodon-binding domain of tRNA YC6258_RS14355 PF13603 Leucyl-tRNA synthetase, Domain 2 YC6258_RS14365 PF00795 Carbon-nitrogen hydrolase YC6258_RS14390 PF01253 Translation initiation factor SUI1 YC6258_RS14405 PF00588 SpoU rRNA Methylase family YC6258_RS14410 PF04893 Yip1 domain YC6258_RS14415 PF03471 Transporter associated domain YC6258_RS14415 PF01595 Cyclin M transmembrane N-terminal domain YC6258_RS14415 PF00571 CBS domain YC6258_RS14420 PF01578 Cytochrome C assembly protein YC6258_RS14425 PF02978 Signal peptide binding domain YC6258_RS14425 PF02881 SRP54-type protein, helical bundle domain YC6258_RS14425 PF00448 SRP54-type protein, GTPase domain YC6258_RS14430 PF01037 Lrp/AsnC ligand binding domain YC6258_RS14435 PF18327 Proline utilization A proline dehydrogenase N-terminal domain YC6258_RS14435 PF14850 DNA-binding domain of Proline dehydrogenase YC6258_RS14435 PF01619 Proline dehydrogenase YC6258_RS14435 PF00171 Aldehyde dehydrogenase family YC6258_RS14440 PF13472 GDSL-like Lipase/Acylhydrolase family YC6258_RS14445 PF00486 Transcriptional regulatory protein, C terminal YC6258_RS14445 PF00072 Response regulator receiver domain YC6258_RS14450 PF00958 GMP synthase C terminal domain YC6258_RS14450 PF00117 Glutamine amidotransferase class-I YC6258_RS14470 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain YC6258_RS14470 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain YC6258_RS14475 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain YC6258_RS14475 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain YC6258_RS14485 PF01370 NAD dependent epimerase/dehydratase family YC6258_RS14490 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain YC6258_RS14490 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain YC6258_RS14490 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain YC6258_RS14495 PF02397 Bacterial sugar transferase YC6258_RS14520 PF00534 Glycosyl transferases group 1 YC6258_RS14520 PF13439 Glycosyltransferase Family 4 YC6258_RS14535 PF00155 Aminotransferase class I and II YC6258_RS14540 PF12344 Ultra-violet resistance protein B YC6258_RS14540 PF02151 UvrB/uvrC motif YC6258_RS14540 PF04851 Type III restriction enzyme, res subunit YC6258_RS14540 PF00271 Helicase conserved C-terminal domain YC6258_RS14540 PF17757 UvrB interaction domain YC6258_RS14545 PF00483 Nucleotidyl transferase YC6258_RS14545 PF01050 Mannose-6-phosphate isomerase YC6258_RS14565 PF02622 Uncharacterized ACR, COG1678 YC6258_RS14570 PF01048 Phosphorylase superfamily YC6258_RS14580 PF00270 DEAD/DEAH box helicase YC6258_RS14580 PF00271 Helicase conserved C-terminal domain YC6258_RS14580 PF03461 TRCF domain YC6258_RS14580 PF17757 UvrB interaction domain YC6258_RS14580 PF02559 CarD-like/TRCF domain YC6258_RS14585 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) YC6258_RS14585 PF11973 NQRA C-terminal domain YC6258_RS14590 PF03116 NQR2, RnfD, RnfE family YC6258_RS14595 PF04205 FMN-binding domain YC6258_RS14600 PF02508 Rnf-Nqr subunit, membrane protein YC6258_RS14605 PF02508 Rnf-Nqr subunit, membrane protein YC6258_RS14610 PF00175 Oxidoreductase NAD-binding domain YC6258_RS14610 PF00111 2Fe-2S iron-sulfur cluster binding domain YC6258_RS14610 PF00970 Oxidoreductase FAD-binding domain YC6258_RS14615 PF02424 ApbE family YC6258_RS14625 PF07992 Pyridine nucleotide-disulphide oxidoreductase YC6258_RS14625 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YC6258_RS14630 PF00753 Metallo-beta-lactamase superfamily YC6258_RS14640 PF01738 Dienelactone hydrolase family YC6258_RS14645 PF12111 Polyribonucleotide phosphorylase C terminal YC6258_RS14645 PF10150 Ribonuclease E/G family YC6258_RS14645 PF00575 S1 RNA binding domain YC6258_RS14655 PF00849 RNA pseudouridylate synthase YC6258_RS14655 PF01479 S4 domain YC6258_RS14660 PF01343 Peptidase family S49 YC6258_RS14660 PF06965 Na+/H+ antiporter 1 YC6258_RS14665 PF02545 Maf-like protein YC6258_RS14670 PF02620 Large ribosomal RNA subunit accumulation protein YceD YC6258_RS14675 PF01783 Ribosomal L32p protein family YC6258_RS14680 PF00698 Acyl transferase domain YC6258_RS14690 PF00550 Phosphopantetheine attachment site YC6258_RS14695 PF02801 Beta-ketoacyl synthase, C-terminal domain YC6258_RS14695 PF00109 Beta-ketoacyl synthase, N-terminal domain YC6258_RS14700 PF01063 Amino-transferase class IV YC6258_RS14705 PF02618 YceG-like family YC6258_RS14710 PF02223 Thymidylate kinase YC6258_RS14735 PF00072 Response regulator receiver domain YC6258_RS14735 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS14740 PF00999 Sodium/hydrogen exchanger family YC6258_RS14740 PF02254 TrkA-N domain YC6258_RS14745 PF00793 DAHP synthetase I family YC6258_RS14755 PF11897 Protein of unknown function (DUF3417) YC6258_RS14755 PF00343 Carbohydrate phosphorylase YC6258_RS14760 PF00580 UvrD/REP helicase N-terminal domain YC6258_RS14760 PF13361 UvrD-like helicase C-terminal domain YC6258_RS14770 PF01925 Sulfite exporter TauE/SafE YC6258_RS14775 PF03466 LysR substrate binding domain YC6258_RS14775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS14780 PF13396 Phospholipase_D-nuclease N-terminal YC6258_RS14780 PF13091 PLD-like domain YC6258_RS14785 PF03466 LysR substrate binding domain YC6258_RS14785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS14810 PF00072 Response regulator receiver domain YC6258_RS14810 PF01584 CheW-like domain YC6258_RS14820 PF04055 Radical SAM superfamily YC6258_RS14820 PF06969 HemN C-terminal domain YC6258_RS14845 PF14718 Soluble lytic murein transglycosylase L domain YC6258_RS14845 PF01464 Transglycosylase SLT domain YC6258_RS14850 PF00873 AcrB/AcrD/AcrF family YC6258_RS14860 PF00005 ABC transporter YC6258_RS14860 PF16326 ABC transporter C-terminal domain YC6258_RS14860 PF12848 ABC transporter YC6258_RS14875 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YC6258_RS14875 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YC6258_RS14875 PF00378 Enoyl-CoA hydratase/isomerase YC6258_RS14880 PF02803 Thiolase, C-terminal domain YC6258_RS14880 PF00108 Thiolase, N-terminal domain YC6258_RS14890 PF01396 Topoisomerase DNA binding C4 zinc finger YC6258_RS14890 PF01751 Toprim domain YC6258_RS14890 PF01131 DNA topoisomerase YC6258_RS14890 PF08272 Topoisomerase I zinc-ribbon-like YC6258_RS14895 PF00285 Citrate synthase, C-terminal domain YC6258_RS14900 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit YC6258_RS14905 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit YC6258_RS14910 PF02910 Fumarate reductase flavoprotein C-term YC6258_RS14910 PF00890 FAD binding domain YC6258_RS14915 PF13085 2Fe-2S iron-sulfur cluster binding domain YC6258_RS14920 PF16870 2-oxoglutarate dehydrogenase C-terminal YC6258_RS14920 PF00676 Dehydrogenase E1 component YC6258_RS14920 PF16078 2-oxoglutarate dehydrogenase N-terminus YC6258_RS14920 PF02779 Transketolase, pyrimidine binding domain YC6258_RS14925 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) YC6258_RS14925 PF00364 Biotin-requiring enzyme YC6258_RS14925 PF02817 e3 binding domain YC6258_RS14930 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YC6258_RS14930 PF07992 Pyridine nucleotide-disulphide oxidoreductase YC6258_RS14935 PF00549 CoA-ligase YC6258_RS14935 PF08442 ATP-grasp domain YC6258_RS14940 PF00549 CoA-ligase YC6258_RS14940 PF02629 CoA binding domain YC6258_RS14965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS14965 PF00183 Hsp90 protein YC6258_RS15000 PF00202 Aminotransferase class-III YC6258_RS15005 PF08007 Cupin superfamily protein YC6258_RS15010 PF00206 Lyase YC6258_RS15010 PF08328 Adenylosuccinate lyase C-terminal YC6258_RS15015 PF04356 Protein of unknown function (DUF489) YC6258_RS15025 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase YC6258_RS15025 PF07055 Enoyl reductase FAD binding domain YC6258_RS15025 PF12241 Trans-2-enoyl-CoA reductase catalytic region YC6258_RS15030 PF00849 RNA pseudouridylate synthase YC6258_RS15035 PF00180 Isocitrate/isopropylmalate dehydrogenase YC6258_RS15040 PF00313 'Cold-shock' DNA-binding domain YC6258_RS15045 PF02617 ATP-dependent Clp protease adaptor protein ClpS YC6258_RS15050 PF00004 ATPase family associated with various cellular activities (AAA) YC6258_RS15050 PF17871 AAA lid domain YC6258_RS15050 PF10431 C-terminal, D2-small domain, of ClpB protein YC6258_RS15050 PF02861 Clp amino terminal domain, pathogenicity island component YC6258_RS15050 PF07724 AAA domain (Cdc48 subfamily) YC6258_RS15055 PF01176 Translation initiation factor 1A / IF-1 YC6258_RS15060 PF04377 Arginine-tRNA-protein transferase, C terminus YC6258_RS15060 PF04376 Arginine-tRNA-protein transferase, N terminus YC6258_RS15065 PF03588 Leucyl/phenylalanyl-tRNA protein transferase YC6258_RS15070 PF01580 FtsK/SpoIIIE family YC6258_RS15070 PF09397 Ftsk gamma domain YC6258_RS15070 PF13491 4TM region of DNA translocase FtsK/SpoIIIE YC6258_RS15070 PF17854 FtsK alpha domain YC6258_RS15075 PF03548 Outer membrane lipoprotein carrier protein LolA YC6258_RS15080 PF16193 AAA C-terminal domain YC6258_RS15080 PF00004 ATPase family associated with various cellular activities (AAA) YC6258_RS15080 PF12002 MgsA AAA+ ATPase C terminal YC6258_RS15085 PF02537 CrcB-like protein, Camphor Resistance (CrcB) YC6258_RS15090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) YC6258_RS15090 PF02403 Seryl-tRNA synthetase N-terminal domain YC6258_RS15100 PF00923 Transaldolase/Fructose-6-phosphate aldolase YC6258_RS15105 PF01207 Dihydrouridine synthase (Dus) YC6258_RS15110 PF06450 Bacterial Na+/H+ antiporter B (NhaB) YC6258_RS15130 PF08496 Peptidase family S49 N-terminal YC6258_RS15130 PF01343 Peptidase family S49 YC6258_RS15135 PF01464 Transglycosylase SLT domain YC6258_RS15135 PF01476 LysM domain YC6258_RS15145 PF00075 RNase H YC6258_RS15150 PF00929 Exonuclease YC6258_RS15165 PF00248 Aldo/keto reductase family YC6258_RS15180 PF00311 Phosphoenolpyruvate carboxylase YC6258_RS15205 PF01882 Protein of unknown function DUF58 YC6258_RS15210 PF07726 ATPase family associated with various cellular activities (AAA) YC6258_RS15210 PF17863 AAA lid domain YC6258_RS15215 PF05088 Bacterial NAD-glutamate dehydrogenase YC6258_RS15225 PF01180 Dihydroorotate dehydrogenase YC6258_RS15230 PF00717 Peptidase S24-like YC6258_RS15230 PF01726 LexA DNA binding domain YC6258_RS15240 PF01627 Hpt domain YC6258_RS15240 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS15240 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) YC6258_RS15240 PF00672 HAMP domain YC6258_RS15240 PF00072 Response regulator receiver domain YC6258_RS15240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS15245 PF01590 GAF domain YC6258_RS15245 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS15245 PF00563 EAL domain YC6258_RS15245 PF00360 Phytochrome region YC6258_RS15250 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) YC6258_RS15250 PF01627 Hpt domain YC6258_RS15250 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS15250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS15250 PF00072 Response regulator receiver domain YC6258_RS15250 PF00672 HAMP domain YC6258_RS15255 PF03707 Bacterial signalling protein N terminal repeat YC6258_RS15255 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS15255 PF00563 EAL domain YC6258_RS15330 PF00106 short chain dehydrogenase YC6258_RS15345 PF00583 Acetyltransferase (GNAT) family YC6258_RS15370 PF00202 Aminotransferase class-III YC6258_RS15375 PF03621 MbtH-like protein YC6258_RS15380 PF02668 Taurine catabolism dioxygenase TauD, TfdA family YC6258_RS15385 PF00501 AMP-binding enzyme YC6258_RS15390 PF00501 AMP-binding enzyme YC6258_RS15390 PF00550 Phosphopantetheine attachment site YC6258_RS15390 PF00668 Condensation domain YC6258_RS15390 PF13193 AMP-binding enzyme C-terminal domain YC6258_RS15395 PF00668 Condensation domain YC6258_RS15395 PF00501 AMP-binding enzyme YC6258_RS15395 PF13193 AMP-binding enzyme C-terminal domain YC6258_RS15395 PF00975 Thioesterase domain YC6258_RS15395 PF00550 Phosphopantetheine attachment site YC6258_RS15400 PF13193 AMP-binding enzyme C-terminal domain YC6258_RS15400 PF00668 Condensation domain YC6258_RS15400 PF00550 Phosphopantetheine attachment site YC6258_RS15400 PF00975 Thioesterase domain YC6258_RS15400 PF00501 AMP-binding enzyme YC6258_RS15410 PF00005 ABC transporter YC6258_RS15465 PF00589 Phage integrase family YC6258_RS15465 PF13495 Phage integrase, N-terminal SAM-like domain YC6258_RS15470 PF00583 Acetyltransferase (GNAT) family YC6258_RS15520 PF00356 Bacterial regulatory proteins, lacI family YC6258_RS15525 PF11975 Family 4 glycosyl hydrolase C-terminal domain YC6258_RS15525 PF02056 Family 4 glycosyl hydrolase YC6258_RS15535 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS15540 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS15600 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain YC6258_RS15600 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain YC6258_RS15605 PF12833 Helix-turn-helix domain YC6258_RS15605 PF01965 DJ-1/PfpI family YC6258_RS15620 PF00330 Aconitase family (aconitate hydratase) YC6258_RS15620 PF00694 Aconitase C-terminal domain YC6258_RS15625 PF06965 Na+/H+ antiporter 1 YC6258_RS15635 PF01145 SPFH domain / Band 7 family YC6258_RS15635 PF12221 Bacterial membrane protein N terminal YC6258_RS15695 PF00255 Glutathione peroxidase YC6258_RS15705 PF00356 Bacterial regulatory proteins, lacI family YC6258_RS15720 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS15725 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS15740 PF00942 Cellulose binding domain YC6258_RS15740 PF03442 Carbohydrate binding domain X2 YC6258_RS15770 PF00593 TonB dependent receptor YC6258_RS15770 PF07715 TonB-dependent Receptor Plug Domain YC6258_RS15775 PF00005 ABC transporter YC6258_RS15780 PF01032 FecCD transport family YC6258_RS15785 PF01032 FecCD transport family YC6258_RS15790 PF01497 Periplasmic binding protein YC6258_RS15820 PF13673 Acetyltransferase (GNAT) domain YC6258_RS15850 PF00589 Phage integrase family YC6258_RS15850 PF13495 Phage integrase, N-terminal SAM-like domain YC6258_RS15920 PF02371 Transposase IS116/IS110/IS902 family YC6258_RS15920 PF01548 Transposase YC6258_RS15955 PF00553 Cellulose binding domain YC6258_RS15955 PF00331 Glycosyl hydrolase family 10 YC6258_RS15955 PF03422 Carbohydrate binding module (family 6) YC6258_RS15975 PF00583 Acetyltransferase (GNAT) family YC6258_RS15985 PF08241 Methyltransferase domain YC6258_RS15990 PF00933 Glycosyl hydrolase family 3 N terminal domain YC6258_RS15995 PF05532 CsbD-like YC6258_RS16000 PF03707 Bacterial signalling protein N terminal repeat YC6258_RS16000 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS16000 PF00563 EAL domain YC6258_RS16005 PF06165 Glycosyltransferase family 36 YC6258_RS16005 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain YC6258_RS16005 PF10091 Putative glucoamylase YC6258_RS16010 PF00300 Histidine phosphatase superfamily (branch 1) YC6258_RS16025 PF07992 Pyridine nucleotide-disulphide oxidoreductase YC6258_RS16025 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YC6258_RS16035 PF00149 Calcineurin-like phosphoesterase YC6258_RS16045 PF01494 FAD binding domain YC6258_RS16045 PF07976 Phenol hydroxylase, C-terminal dimerisation domain YC6258_RS16050 PF03055 Retinal pigment epithelial membrane protein YC6258_RS16100 PF03795 YCII-related domain YC6258_RS16105 PF18029 Glyoxalase-like domain YC6258_RS16105 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YC6258_RS16110 PF07237 Protein of unknown function (DUF1428) YC6258_RS16115 PF08281 Sigma-70, region 4 YC6258_RS16115 PF04542 Sigma-70 region 2 YC6258_RS16120 PF01022 Bacterial regulatory protein, arsR family YC6258_RS16130 PF03358 NADPH-dependent FMN reductase YC6258_RS16135 PF01758 Sodium Bile acid symporter family YC6258_RS16215 PF01695 IstB-like ATP binding protein YC6258_RS16220 PF00672 HAMP domain YC6258_RS16220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS16235 PF03466 LysR substrate binding domain YC6258_RS16235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS16250 PF00550 Phosphopantetheine attachment site YC6258_RS16250 PF08659 KR domain YC6258_RS16250 PF02801 Beta-ketoacyl synthase, C-terminal domain YC6258_RS16250 PF00109 Beta-ketoacyl synthase, N-terminal domain YC6258_RS16250 PF16197 Ketoacyl-synthetase C-terminal extension YC6258_RS16250 PF14765 Polyketide synthase dehydratase YC6258_RS16255 PF16197 Ketoacyl-synthetase C-terminal extension YC6258_RS16255 PF00668 Condensation domain YC6258_RS16255 PF13193 AMP-binding enzyme C-terminal domain YC6258_RS16255 PF08659 KR domain YC6258_RS16255 PF00550 Phosphopantetheine attachment site YC6258_RS16255 PF00501 AMP-binding enzyme YC6258_RS16255 PF00109 Beta-ketoacyl synthase, N-terminal domain YC6258_RS16255 PF14765 Polyketide synthase dehydratase YC6258_RS16255 PF02801 Beta-ketoacyl synthase, C-terminal domain YC6258_RS16260 PF14765 Polyketide synthase dehydratase YC6258_RS16260 PF00550 Phosphopantetheine attachment site YC6258_RS16260 PF08659 KR domain YC6258_RS16260 PF02801 Beta-ketoacyl synthase, C-terminal domain YC6258_RS16260 PF00109 Beta-ketoacyl synthase, N-terminal domain YC6258_RS16260 PF16197 Ketoacyl-synthetase C-terminal extension YC6258_RS16260 PF13193 AMP-binding enzyme C-terminal domain YC6258_RS16260 PF00501 AMP-binding enzyme YC6258_RS16260 PF00668 Condensation domain YC6258_RS16270 PF13673 Acetyltransferase (GNAT) domain YC6258_RS16300 PF01661 Macro domain YC6258_RS16310 PF02311 AraC-like ligand binding domain YC6258_RS16310 PF12833 Helix-turn-helix domain YC6258_RS16320 PF01370 NAD dependent epimerase/dehydratase family YC6258_RS16335 PF01494 FAD binding domain YC6258_RS16345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YC6258_RS16360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS16360 PF03466 LysR substrate binding domain YC6258_RS16365 PF00672 HAMP domain YC6258_RS16365 PF12729 Four helix bundle sensory module for signal transduction YC6258_RS16365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS16375 PF00698 Acyl transferase domain YC6258_RS16380 PF07690 Major Facilitator Superfamily YC6258_RS16385 PF03060 Nitronate monooxygenase YC6258_RS16385 PF00698 Acyl transferase domain YC6258_RS16390 PF08242 Methyltransferase domain YC6258_RS16390 PF00550 Phosphopantetheine attachment site YC6258_RS16390 PF14765 Polyketide synthase dehydratase YC6258_RS16390 PF02801 Beta-ketoacyl synthase, C-terminal domain YC6258_RS16390 PF00109 Beta-ketoacyl synthase, N-terminal domain YC6258_RS16390 PF16197 Ketoacyl-synthetase C-terminal extension YC6258_RS16390 PF08659 KR domain YC6258_RS16395 PF00501 AMP-binding enzyme YC6258_RS16395 PF14765 Polyketide synthase dehydratase YC6258_RS16395 PF13193 AMP-binding enzyme C-terminal domain YC6258_RS16395 PF00550 Phosphopantetheine attachment site YC6258_RS16395 PF00109 Beta-ketoacyl synthase, N-terminal domain YC6258_RS16395 PF08659 KR domain YC6258_RS16395 PF16197 Ketoacyl-synthetase C-terminal extension YC6258_RS16395 PF02801 Beta-ketoacyl synthase, C-terminal domain YC6258_RS16395 PF00668 Condensation domain YC6258_RS16410 PF00109 Beta-ketoacyl synthase, N-terminal domain YC6258_RS16410 PF16197 Ketoacyl-synthetase C-terminal extension YC6258_RS16410 PF14765 Polyketide synthase dehydratase YC6258_RS16410 PF00550 Phosphopantetheine attachment site YC6258_RS16410 PF08659 KR domain YC6258_RS16410 PF02801 Beta-ketoacyl synthase, C-terminal domain YC6258_RS16415 PF00550 Phosphopantetheine attachment site YC6258_RS16415 PF14765 Polyketide synthase dehydratase YC6258_RS16415 PF13193 AMP-binding enzyme C-terminal domain YC6258_RS16415 PF08659 KR domain YC6258_RS16415 PF02801 Beta-ketoacyl synthase, C-terminal domain YC6258_RS16415 PF00109 Beta-ketoacyl synthase, N-terminal domain YC6258_RS16415 PF16197 Ketoacyl-synthetase C-terminal extension YC6258_RS16415 PF00501 AMP-binding enzyme YC6258_RS16415 PF00668 Condensation domain YC6258_RS16445 PF00698 Acyl transferase domain YC6258_RS16455 PF00171 Aldehyde dehydrogenase family YC6258_RS16460 PF06505 Activator of aromatic catabolism YC6258_RS16460 PF00158 Sigma-54 interaction domain YC6258_RS16460 PF02954 Bacterial regulatory protein, Fis family YC6258_RS16460 PF02830 V4R domain YC6258_RS16485 PF01425 Amidase YC6258_RS16490 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain YC6258_RS16490 PF00289 Biotin carboxylase, N-terminal domain YC6258_RS16490 PF02785 Biotin carboxylase C-terminal domain YC6258_RS16505 PF00005 ABC transporter YC6258_RS16510 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS16550 PF01661 Macro domain YC6258_RS16575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS16575 PF03466 LysR substrate binding domain YC6258_RS16580 PF00248 Aldo/keto reductase family YC6258_RS16590 PF13286 Phosphohydrolase-associated domain YC6258_RS16590 PF01966 HD domain YC6258_RS16680 PF03060 Nitronate monooxygenase YC6258_RS16680 PF00698 Acyl transferase domain YC6258_RS16695 PF00005 ABC transporter YC6258_RS16700 PF00975 Thioesterase domain YC6258_RS16705 PF00296 Luciferase-like monooxygenase YC6258_RS16710 PF02801 Beta-ketoacyl synthase, C-terminal domain YC6258_RS16710 PF08659 KR domain YC6258_RS16710 PF14765 Polyketide synthase dehydratase YC6258_RS16710 PF00550 Phosphopantetheine attachment site YC6258_RS16710 PF08242 Methyltransferase domain YC6258_RS16710 PF16197 Ketoacyl-synthetase C-terminal extension YC6258_RS16710 PF00109 Beta-ketoacyl synthase, N-terminal domain YC6258_RS16715 PF00550 Phosphopantetheine attachment site YC6258_RS16715 PF08659 KR domain YC6258_RS16715 PF02801 Beta-ketoacyl synthase, C-terminal domain YC6258_RS16715 PF00109 Beta-ketoacyl synthase, N-terminal domain YC6258_RS16715 PF16197 Ketoacyl-synthetase C-terminal extension YC6258_RS16715 PF14765 Polyketide synthase dehydratase YC6258_RS16715 PF08242 Methyltransferase domain YC6258_RS16720 PF08659 KR domain YC6258_RS16720 PF00668 Condensation domain YC6258_RS16720 PF02801 Beta-ketoacyl synthase, C-terminal domain YC6258_RS16720 PF00109 Beta-ketoacyl synthase, N-terminal domain YC6258_RS16720 PF00501 AMP-binding enzyme YC6258_RS16720 PF13193 AMP-binding enzyme C-terminal domain YC6258_RS16720 PF16197 Ketoacyl-synthetase C-terminal extension YC6258_RS16720 PF00550 Phosphopantetheine attachment site YC6258_RS16720 PF14765 Polyketide synthase dehydratase YC6258_RS16730 PF00698 Acyl transferase domain YC6258_RS16735 PF00563 EAL domain YC6258_RS16735 PF08668 HDOD domain YC6258_RS16740 PF00265 Thymidine kinase YC6258_RS16745 PF08367 Peptidase M16C associated YC6258_RS16745 PF00675 Insulinase (Peptidase family M16) YC6258_RS16745 PF05193 Peptidase M16 inactive domain YC6258_RS16750 PF00378 Enoyl-CoA hydratase/isomerase YC6258_RS16760 PF01027 Inhibitor of apoptosis-promoting Bax1 YC6258_RS16765 PF02635 DsrE/DsrF-like family YC6258_RS16780 PF04358 DsrC like protein YC6258_RS16785 PF02885 Glycosyl transferase family, helical bundle domain YC6258_RS16785 PF00591 Glycosyl transferase family, a/b domain YC6258_RS16795 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YC6258_RS16795 PF10414 Sirohaem synthase dimerisation region YC6258_RS16795 PF14824 Sirohaem biosynthesis protein central YC6258_RS16920 PF02899 Phage integrase, N-terminal SAM-like domain YC6258_RS16920 PF00589 Phage integrase family YC6258_RS16940 PF01066 CDP-alcohol phosphatidyltransferase YC6258_RS16945 PF08459 UvrC Helix-hairpin-helix N-terminal YC6258_RS16945 PF01541 GIY-YIG catalytic domain YC6258_RS16945 PF02151 UvrB/uvrC motif YC6258_RS16950 PF00072 Response regulator receiver domain YC6258_RS16950 PF00196 Bacterial regulatory proteins, luxR family YC6258_RS16955 PF02562 PhoH-like protein YC6258_RS16955 PF13638 PIN domain YC6258_RS16970 PF00425 chorismate binding enzyme YC6258_RS16970 PF04715 Anthranilate synthase component I, N terminal region YC6258_RS16980 PF01507 Phosphoadenosine phosphosulfate reductase family YC6258_RS16985 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain YC6258_RS16985 PF01565 FAD binding domain YC6258_RS16990 PF01451 Low molecular weight phosphotyrosine protein phosphatase YC6258_RS16995 PF02348 Cytidylyltransferase YC6258_RS17000 PF02606 Tetraacyldisaccharide-1-P 4'-kinase YC6258_RS17005 PF02472 Biopolymer transport protein ExbD/TolR YC6258_RS17010 PF01618 MotA/TolQ/ExbB proton channel family YC6258_RS17015 PF03772 Competence protein YC6258_RS17015 PF00753 Metallo-beta-lactamase superfamily YC6258_RS17025 PF00005 ABC transporter YC6258_RS17030 PF02687 FtsX-like permease family YC6258_RS17030 PF12704 MacB-like periplasmic core domain YC6258_RS17040 PF04371 Porphyromonas-type peptidyl-arginine deiminase YC6258_RS17045 PF13307 Helicase C-terminal domain YC6258_RS17045 PF06733 DEAD_2 YC6258_RS17050 PF00793 DAHP synthetase I family YC6258_RS17065 PF05698 Bacterial trigger factor protein (TF) C-terminus YC6258_RS17070 PF00216 Bacterial DNA-binding protein YC6258_RS17075 PF02190 ATP-dependent protease La (LON) substrate-binding domain YC6258_RS17075 PF00004 ATPase family associated with various cellular activities (AAA) YC6258_RS17075 PF05362 Lon protease (S16) C-terminal proteolytic domain YC6258_RS17080 PF07724 AAA domain (Cdc48 subfamily) YC6258_RS17080 PF06689 ClpX C4-type zinc finger YC6258_RS17080 PF10431 C-terminal, D2-small domain, of ClpB protein YC6258_RS17085 PF00574 Clp protease YC6258_RS17090 PF05697 Bacterial trigger factor protein (TF) YC6258_RS17090 PF05698 Bacterial trigger factor protein (TF) C-terminus YC6258_RS17090 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YC6258_RS17115 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain YC6258_RS17115 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YC6258_RS17120 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YC6258_RS17125 PF00149 Calcineurin-like phosphoesterase YC6258_RS17130 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) YC6258_RS17135 PF05958 tRNA (Uracil-5-)-methyltransferase YC6258_RS17145 PF12951 Passenger-associated-transport-repeat YC6258_RS17150 PF00149 Calcineurin-like phosphoesterase YC6258_RS17160 PF02470 MlaD protein YC6258_RS17165 PF04403 Paraquat-inducible protein A YC6258_RS17170 PF04403 Paraquat-inducible protein A YC6258_RS17180 PF07992 Pyridine nucleotide-disulphide oxidoreductase YC6258_RS17180 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YC6258_RS17185 PF00583 Acetyltransferase (GNAT) family YC6258_RS17185 PF13508 Acetyltransferase (GNAT) domain YC6258_RS17200 PF03934 Type II secretion system (T2SS), protein K YC6258_RS17205 PF07963 Prokaryotic N-terminal methylation motif YC6258_RS17205 PF11612 Type II secretion system (T2SS), protein J YC6258_RS17210 PF07963 Prokaryotic N-terminal methylation motif YC6258_RS17210 PF02501 Type II secretion system (T2SS), protein I YC6258_RS17220 PF08334 Type II secretion system (T2SS), protein G YC6258_RS17220 PF07963 Prokaryotic N-terminal methylation motif YC6258_RS17225 PF00482 Type II secretion system (T2SS), protein F YC6258_RS17230 PF00437 Type II/IV secretion system protein YC6258_RS17235 PF00486 Transcriptional regulatory protein, C terminal YC6258_RS17235 PF00072 Response regulator receiver domain YC6258_RS17245 PF00766 Electron transfer flavoprotein FAD-binding domain YC6258_RS17245 PF01012 Electron transfer flavoprotein domain YC6258_RS17250 PF01012 Electron transfer flavoprotein domain YC6258_RS17260 PF01894 Uncharacterised protein family UPF0047 YC6258_RS17270 PF05175 Methyltransferase small domain YC6258_RS17275 PF01170 Putative RNA methylase family UPF0020 YC6258_RS17275 PF02926 THUMP domain YC6258_RS17275 PF10672 S-adenosylmethionine-dependent methyltransferase YC6258_RS17290 PF00216 Bacterial DNA-binding protein YC6258_RS17295 PF00664 ABC transporter transmembrane region YC6258_RS17295 PF00005 ABC transporter YC6258_RS17300 PF00849 RNA pseudouridylate synthase YC6258_RS17315 PF00308 Bacterial dnaA protein YC6258_RS17320 PF01594 AI-2E family transporter YC6258_RS17330 PF02769 AIR synthase related protein, C-terminal domain YC6258_RS17330 PF00586 AIR synthase related protein, N-terminal domain YC6258_RS17335 PF00551 Formyl transferase YC6258_RS17345 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YC6258_RS17345 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YC6258_RS17355 PF10609 NUBPL iron-transfer P-loop NTPase YC6258_RS17360 PF09334 tRNA synthetases class I (M) YC6258_RS17360 PF01588 Putative tRNA binding domain YC6258_RS17365 PF02508 Rnf-Nqr subunit, membrane protein YC6258_RS17370 PF04060 Putative Fe-S cluster YC6258_RS17375 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit YC6258_RS17375 PF13375 RnfC Barrel sandwich hybrid domain YC6258_RS17375 PF12838 4Fe-4S dicluster domain YC6258_RS17375 PF10531 SLBB domain YC6258_RS17380 PF03116 NQR2, RnfD, RnfE family YC6258_RS17385 PF04205 FMN-binding domain YC6258_RS17390 PF02508 Rnf-Nqr subunit, membrane protein YC6258_RS17395 PF00730 HhH-GPD superfamily base excision DNA repair protein YC6258_RS17395 PF00633 Helix-hairpin-helix motif YC6258_RS17395 PF10576 Iron-sulfur binding domain of endonuclease III YC6258_RS17410 PF00293 NUDIX domain YC6258_RS17425 PF01784 NIF3 (NGG1p interacting factor 3) YC6258_RS17445 PF00072 Response regulator receiver domain YC6258_RS17445 PF00486 Transcriptional regulatory protein, C terminal YC6258_RS17465 PF01297 Zinc-uptake complex component A periplasmic YC6258_RS17470 PF00005 ABC transporter YC6258_RS17475 PF00950 ABC 3 transport family YC6258_RS17480 PF01475 Ferric uptake regulator family YC6258_RS17485 PF01502 Phosphoribosyl-AMP cyclohydrolase YC6258_RS17490 PF07670 Nucleoside recognition YC6258_RS17490 PF02421 Ferrous iron transport protein B YC6258_RS17490 PF17910 FeoB cytosolic helical domain YC6258_RS17490 PF07664 Ferrous iron transport protein B C terminus YC6258_RS17505 PF12706 Beta-lactamase superfamily domain YC6258_RS17510 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YC6258_RS17510 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II YC6258_RS17510 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain YC6258_RS17510 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III YC6258_RS17540 PF01565 FAD binding domain YC6258_RS17540 PF02913 FAD linked oxidases, C-terminal domain YC6258_RS17555 PF00664 ABC transporter transmembrane region YC6258_RS17555 PF00005 ABC transporter YC6258_RS17560 PF00664 ABC transporter transmembrane region YC6258_RS17560 PF00005 ABC transporter YC6258_RS17570 PF13417 Glutathione S-transferase, N-terminal domain YC6258_RS17570 PF04399 Glutaredoxin 2, C terminal domain YC6258_RS17575 PF13419 Haloacid dehalogenase-like hydrolase YC6258_RS17585 PF00175 Oxidoreductase NAD-binding domain YC6258_RS17585 PF00111 2Fe-2S iron-sulfur cluster binding domain YC6258_RS17590 PF00355 Rieske [2Fe-2S] domain YC6258_RS17600 PF00378 Enoyl-CoA hydratase/isomerase YC6258_RS17605 PF01047 MarR family YC6258_RS17630 PF13183 4Fe-4S dicluster domain YC6258_RS17630 PF01565 FAD binding domain YC6258_RS17630 PF02913 FAD linked oxidases, C-terminal domain YC6258_RS17635 PF01474 Class-II DAHP synthetase family YC6258_RS17640 PF01566 Natural resistance-associated macrophage protein YC6258_RS17650 PF04539 Sigma-70 region 3 YC6258_RS17650 PF04545 Sigma-70, region 4 YC6258_RS17650 PF04542 Sigma-70 region 2 YC6258_RS17655 PF10609 NUBPL iron-transfer P-loop NTPase YC6258_RS17660 PF00448 SRP54-type protein, GTPase domain YC6258_RS17665 PF00771 FHIPEP family YC6258_RS17670 PF00330 Aconitase family (aconitate hydratase) YC6258_RS17670 PF11791 Aconitate B N-terminal domain YC6258_RS17670 PF06434 Aconitate hydratase 2 N-terminus YC6258_RS17675 PF01339 CheB methylesterase YC6258_RS17675 PF00072 Response regulator receiver domain YC6258_RS17685 PF05230 MASE2 domain YC6258_RS17685 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS17695 PF01965 DJ-1/PfpI family YC6258_RS17705 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain YC6258_RS17705 PF02769 AIR synthase related protein, C-terminal domain YC6258_RS17705 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal YC6258_RS17710 PF01464 Transglycosylase SLT domain YC6258_RS17710 PF00497 Bacterial extracellular solute-binding proteins, family 3 YC6258_RS17715 PF00089 Trypsin YC6258_RS17725 PF00691 OmpA family YC6258_RS17730 PF00929 Exonuclease YC6258_RS17735 PF01910 Thiamine-binding protein YC6258_RS17740 PF00578 AhpC/TSA family YC6258_RS17740 PF10417 C-terminal domain of 1-Cys peroxiredoxin YC6258_RS17750 PF00005 ABC transporter YC6258_RS17755 PF13472 GDSL-like Lipase/Acylhydrolase family YC6258_RS17765 PF00004 ATPase family associated with various cellular activities (AAA) YC6258_RS17765 PF05362 Lon protease (S16) C-terminal proteolytic domain YC6258_RS17765 PF02190 ATP-dependent protease La (LON) substrate-binding domain YC6258_RS17775 PF02656 Domain of unknown function (DUF202) YC6258_RS17780 PF02656 Domain of unknown function (DUF202) YC6258_RS17790 PF07745 Glycosyl hydrolase family 53 YC6258_RS17815 PF07729 FCD domain YC6258_RS17815 PF00392 Bacterial regulatory proteins, gntR family YC6258_RS17820 PF00582 Universal stress protein family YC6258_RS17825 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component YC6258_RS17830 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component YC6258_RS17835 PF03480 Bacterial extracellular solute-binding protein, family 7 YC6258_RS17855 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family YC6258_RS17860 PF16655 PhoD-like phosphatase, N-terminal domain YC6258_RS17860 PF09423 PhoD-like phosphatase YC6258_RS17895 PF00150 Cellulase (glycosyl hydrolase family 5) YC6258_RS17895 PF02013 Cellulose or protein binding domain YC6258_RS17930 PF13597 Anaerobic ribonucleoside-triphosphate reductase YC6258_RS17930 PF03477 ATP cone domain YC6258_RS17935 PF01037 Lrp/AsnC ligand binding domain YC6258_RS17940 PF00291 Pyridoxal-phosphate dependent enzyme YC6258_RS17945 PF07690 Major Facilitator Superfamily YC6258_RS17950 PF00544 Pectate lyase YC6258_RS17955 PF00107 Zinc-binding dehydrogenase YC6258_RS17955 PF08240 Alcohol dehydrogenase GroES-like domain YC6258_RS17960 PF03786 D-mannonate dehydratase (UxuA) YC6258_RS17965 PF07729 FCD domain YC6258_RS17965 PF00392 Bacterial regulatory proteins, gntR family YC6258_RS17970 PF03480 Bacterial extracellular solute-binding protein, family 7 YC6258_RS17975 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component YC6258_RS17980 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component YC6258_RS17985 PF17137 Domain of unknown function (DUF5110) YC6258_RS17985 PF13802 Galactose mutarotase-like YC6258_RS17985 PF01055 Glycosyl hydrolases family 31 YC6258_RS17985 PF16338 Domain of unknown function (DUF4968) YC6258_RS17990 PF08125 Mannitol dehydrogenase C-terminal domain YC6258_RS17990 PF01232 Mannitol dehydrogenase Rossmann domain YC6258_RS18040 PF01810 LysE type translocator YC6258_RS18055 PF00669 Bacterial flagellin N-terminal helical region YC6258_RS18060 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YC6258_RS18060 PF00460 Flagella basal body rod protein YC6258_RS18065 PF10135 Rod binding protein YC6258_RS18065 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase YC6258_RS18080 PF00571 CBS domain YC6258_RS18085 PF02028 BCCT, betaine/carnitine/choline family transporter YC6258_RS18125 PF00553 Cellulose binding domain YC6258_RS18125 PF00801 PKD domain YC6258_RS18125 PF00759 Glycosyl hydrolase family 9 YC6258_RS18125 PF02927 Cellulase N-terminal ig-like domain YC6258_RS18125 PF02013 Cellulose or protein binding domain YC6258_RS18145 PF06426 Serine acetyltransferase, N-terminal YC6258_RS18145 PF00132 Bacterial transferase hexapeptide (six repeats) YC6258_RS18150 PF00588 SpoU rRNA Methylase family YC6258_RS18165 PF07549 SecD/SecF GG Motif YC6258_RS18165 PF02355 Protein export membrane protein YC6258_RS18170 PF02355 Protein export membrane protein YC6258_RS18170 PF07549 SecD/SecF GG Motif YC6258_RS18170 PF13721 SecD export protein N-terminal TM region YC6258_RS18175 PF02699 Preprotein translocase subunit YC6258_RS18180 PF01702 Queuine tRNA-ribosyltransferase YC6258_RS18185 PF02547 Queuosine biosynthesis protein YC6258_RS18220 PF08220 DeoR-like helix-turn-helix domain YC6258_RS18220 PF00455 DeoR C terminal sensor domain YC6258_RS18240 PF07690 Major Facilitator Superfamily YC6258_RS18265 PF07690 Major Facilitator Superfamily YC6258_RS18280 PF08402 TOBE domain YC6258_RS18280 PF00005 ABC transporter YC6258_RS18285 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS18290 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS18300 PF01547 Bacterial extracellular solute-binding protein YC6258_RS18305 PF00072 Response regulator receiver domain YC6258_RS18305 PF00486 Transcriptional regulatory protein, C terminal YC6258_RS18310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS18310 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS18310 PF16527 Two-component sensor protein CpxA, periplasmic domain YC6258_RS18310 PF00672 HAMP domain YC6258_RS18315 PF00107 Zinc-binding dehydrogenase YC6258_RS18315 PF08240 Alcohol dehydrogenase GroES-like domain YC6258_RS18325 PF02016 LD-carboxypeptidase N-terminal domain YC6258_RS18325 PF17676 LD-carboxypeptidase C-terminal domain YC6258_RS18330 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase YC6258_RS18340 PF00248 Aldo/keto reductase family YC6258_RS18345 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YC6258_RS18355 PF04909 Amidohydrolase YC6258_RS18360 PF04303 PrpF protein YC6258_RS18365 PF03737 Aldolase/RraA YC6258_RS18370 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component YC6258_RS18380 PF03480 Bacterial extracellular solute-binding protein, family 7 YC6258_RS18385 PF03466 LysR substrate binding domain YC6258_RS18385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS18420 PF02311 AraC-like ligand binding domain YC6258_RS18420 PF12833 Helix-turn-helix domain YC6258_RS18425 PF01494 FAD binding domain YC6258_RS18430 PF01904 Protein of unknown function DUF72 YC6258_RS18450 PF00664 ABC transporter transmembrane region YC6258_RS18450 PF00005 ABC transporter YC6258_RS18460 PF00797 N-acetyltransferase YC6258_RS18470 PF13183 4Fe-4S dicluster domain YC6258_RS18470 PF11870 Domain of unknown function (DUF3390) YC6258_RS18470 PF02589 LUD domain YC6258_RS18475 PF02754 Cysteine-rich domain YC6258_RS18480 PF00392 Bacterial regulatory proteins, gntR family YC6258_RS18480 PF07729 FCD domain YC6258_RS18500 PF00270 DEAD/DEAH box helicase YC6258_RS18500 PF04408 Helicase associated domain (HA2) YC6258_RS18500 PF00271 Helicase conserved C-terminal domain YC6258_RS18500 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold YC6258_RS18500 PF11898 Domain of unknown function (DUF3418) YC6258_RS18505 PF13193 AMP-binding enzyme C-terminal domain YC6258_RS18505 PF00501 AMP-binding enzyme YC6258_RS18510 PF13230 Glutamine amidotransferases class-II YC6258_RS18530 PF03692 Putative zinc- or iron-chelating domain YC6258_RS18535 PF05166 YcgL domain YC6258_RS18540 PF01612 3'-5' exonuclease YC6258_RS18540 PF00570 HRDC domain YC6258_RS18545 PF02132 RecR protein YC6258_RS18545 PF13662 Toprim domain YC6258_RS18550 PF02575 YbaB/EbfC DNA-binding family YC6258_RS18555 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding YC6258_RS18555 PF12169 DNA polymerase III subunits gamma and tau domain III YC6258_RS18555 PF12170 DNA polymerase III tau subunit V interacting with alpha YC6258_RS18560 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain YC6258_RS18560 PF04616 Glycosyl hydrolases family 43 YC6258_RS18585 PF07992 Pyridine nucleotide-disulphide oxidoreductase YC6258_RS18595 PF00152 tRNA synthetases class II (D, K and N) YC6258_RS18595 PF01336 OB-fold nucleic acid binding domain YC6258_RS18600 PF00472 RF-1 domain YC6258_RS18600 PF03462 PCRF domain YC6258_RS18605 PF01368 DHH family YC6258_RS18605 PF02272 DHHA1 domain YC6258_RS18605 PF17768 RecJ OB domain YC6258_RS18615 PF00484 Carbonic anhydrase YC6258_RS18625 PF03193 RsgA GTPase YC6258_RS18630 PF01522 Polysaccharide deacetylase YC6258_RS18640 PF03167 Uracil DNA glycosylase superfamily YC6258_RS18650 PF04235 Protein of unknown function (DUF418) YC6258_RS18740 PF00553 Cellulose binding domain YC6258_RS18740 PF03422 Carbohydrate binding module (family 6) YC6258_RS18740 PF00331 Glycosyl hydrolase family 10 YC6258_RS18745 PF00553 Cellulose binding domain YC6258_RS18745 PF03422 Carbohydrate binding module (family 6) YC6258_RS18745 PF03664 Glycosyl hydrolase family 62 YC6258_RS18760 PF04616 Glycosyl hydrolases family 43 YC6258_RS18760 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain YC6258_RS18770 PF17189 Glycosyl hydrolase family 30 beta sandwich domain YC6258_RS18785 PF00107 Zinc-binding dehydrogenase YC6258_RS18785 PF08240 Alcohol dehydrogenase GroES-like domain YC6258_RS18790 PF00756 Putative esterase YC6258_RS18800 PF07995 Glucose / Sorbosone dehydrogenase YC6258_RS18815 PF01432 Peptidase family M3 YC6258_RS18815 PF08439 Oligopeptidase F YC6258_RS18840 PF00067 Cytochrome P450 YC6258_RS18840 PF00175 Oxidoreductase NAD-binding domain YC6258_RS18840 PF00258 Flavodoxin YC6258_RS18840 PF00667 FAD binding domain YC6258_RS18845 PF00305 Lipoxygenase YC6258_RS18870 PF00005 ABC transporter YC6258_RS18875 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS18880 PF00005 ABC transporter YC6258_RS18890 PF07690 Major Facilitator Superfamily YC6258_RS18900 PF00775 Dioxygenase YC6258_RS18900 PF04444 Catechol dioxygenase N terminus YC6258_RS18910 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) YC6258_RS18910 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 YC6258_RS18920 PF01235 Sodium:alanine symporter family YC6258_RS18925 PF10458 Valyl tRNA synthetase tRNA binding arm YC6258_RS18925 PF00133 tRNA synthetases class I (I, L, M and V) YC6258_RS18925 PF08264 Anticodon-binding domain of tRNA YC6258_RS18935 PF00392 Bacterial regulatory proteins, gntR family YC6258_RS18935 PF00155 Aminotransferase class I and II YC6258_RS18950 PF00563 EAL domain YC6258_RS18950 PF08668 HDOD domain YC6258_RS18955 PF01979 Amidohydrolase family YC6258_RS18965 PF01406 tRNA synthetases class I (C) catalytic domain YC6258_RS18965 PF09190 DALR domain YC6258_RS18970 PF01809 Putative membrane protein insertion efficiency factor YC6258_RS18975 PF03966 Trm112p-like protein YC6258_RS18985 PF00924 Mechanosensitive ion channel YC6258_RS19000 PF00211 Adenylate and Guanylate cyclase catalytic domain YC6258_RS19000 PF00072 Response regulator receiver domain YC6258_RS19010 PF17876 Cold shock domain YC6258_RS19010 PF00773 RNB domain YC6258_RS19010 PF08206 Ribonuclease B OB domain YC6258_RS19025 PF02313 Fumarate reductase subunit D YC6258_RS19030 PF02300 Fumarate reductase subunit C YC6258_RS19035 PF13085 2Fe-2S iron-sulfur cluster binding domain YC6258_RS19035 PF13183 4Fe-4S dicluster domain YC6258_RS19040 PF00890 FAD binding domain YC6258_RS19040 PF02910 Fumarate reductase flavoprotein C-term YC6258_RS19045 PF07556 Protein of unknown function (DUF1538) YC6258_RS19050 PF07556 Protein of unknown function (DUF1538) YC6258_RS19065 PF00194 Eukaryotic-type carbonic anhydrase YC6258_RS19075 PF00925 GTP cyclohydrolase II YC6258_RS19085 PF12833 Helix-turn-helix domain YC6258_RS19090 PF01554 MatE YC6258_RS19105 PF00664 ABC transporter transmembrane region YC6258_RS19105 PF00005 ABC transporter YC6258_RS19110 PF01804 Penicillin amidase YC6258_RS19120 PF02548 Ketopantoate hydroxymethyltransferase YC6258_RS19140 PF08485 Polysaccharide biosynthesis protein C-terminal YC6258_RS19140 PF02719 Polysaccharide biosynthesis protein YC6258_RS19150 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YC6258_RS19155 PF00248 Aldo/keto reductase family YC6258_RS19160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS19160 PF03466 LysR substrate binding domain YC6258_RS19165 PF01312 FlhB HrpN YscU SpaS Family YC6258_RS19170 PF01311 Bacterial export proteins, family 1 YC6258_RS19175 PF01313 Bacterial export proteins, family 3 YC6258_RS19180 PF00813 FliP family YC6258_RS19185 PF04347 Flagellar biosynthesis protein, FliO YC6258_RS19190 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term YC6258_RS19195 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term YC6258_RS19195 PF02154 Flagellar motor switch protein FliM YC6258_RS19210 PF00072 Response regulator receiver domain YC6258_RS19210 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS19210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS19210 PF01627 Hpt domain YC6258_RS19215 PF00072 Response regulator receiver domain YC6258_RS19220 PF13466 STAS domain YC6258_RS19225 PF00072 Response regulator receiver domain YC6258_RS19225 PF01339 CheB methylesterase YC6258_RS19230 PF03975 CheD chemotactic sensory transduction YC6258_RS19235 PF01739 CheR methyltransferase, SAM binding domain YC6258_RS19235 PF03705 CheR methyltransferase, all-alpha domain YC6258_RS19245 PF01584 CheW-like domain YC6258_RS19250 PF01627 Hpt domain YC6258_RS19250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS19250 PF02895 Signal transducing histidine kinase, homodimeric domain YC6258_RS19250 PF09078 CheY binding YC6258_RS19250 PF01584 CheW-like domain YC6258_RS19255 PF00486 Transcriptional regulatory protein, C terminal YC6258_RS19255 PF00072 Response regulator receiver domain YC6258_RS19270 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YC6258_RS19270 PF18269 T3SS EscN ATPase C-terminal domain YC6258_RS19280 PF01706 FliG C-terminal domain YC6258_RS19280 PF14841 FliG middle domain YC6258_RS19280 PF14842 FliG N-terminal domain YC6258_RS19285 PF01514 Secretory protein of YscJ/FliF family YC6258_RS19285 PF08345 Flagellar M-ring protein C-terminal YC6258_RS19290 PF02049 Flagellar hook-basal body complex protein FliE YC6258_RS19295 PF00072 Response regulator receiver domain YC6258_RS19295 PF02954 Bacterial regulatory protein, Fis family YC6258_RS19295 PF00158 Sigma-54 interaction domain YC6258_RS19300 PF13188 PAS domain YC6258_RS19300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS19300 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS19305 PF06490 Flagellar regulatory protein FleQ YC6258_RS19305 PF02954 Bacterial regulatory protein, Fis family YC6258_RS19305 PF00158 Sigma-54 interaction domain YC6258_RS19315 PF02561 Flagellar protein FliS YC6258_RS19335 PF04616 Glycosyl hydrolases family 43 YC6258_RS19335 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain YC6258_RS19340 PF00356 Bacterial regulatory proteins, lacI family YC6258_RS19350 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS19355 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS19370 PF07195 Flagellar hook-associated protein 2 C-terminus YC6258_RS19370 PF02465 Flagellar hook-associated protein 2 N-terminus YC6258_RS19375 PF03646 FlaG protein YC6258_RS19395 PF01262 Alanine dehydrogenase/PNT, C-terminal domain YC6258_RS19395 PF05222 Alanine dehydrogenase/PNT, N-terminal domain YC6258_RS19400 PF01037 Lrp/AsnC ligand binding domain YC6258_RS19405 PF07478 D-ala D-ala ligase C-terminus YC6258_RS19405 PF01820 D-ala D-ala ligase N-terminus YC6258_RS19410 PF01292 Prokaryotic cytochrome b561 YC6258_RS19415 PF00356 Bacterial regulatory proteins, lacI family YC6258_RS19420 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain YC6258_RS19420 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain YC6258_RS19425 PF08544 GHMP kinases C terminal YC6258_RS19425 PF10509 Galactokinase galactose-binding signature YC6258_RS19425 PF00288 GHMP kinases N terminal domain YC6258_RS19435 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS19435 PF00563 EAL domain YC6258_RS19435 PF13188 PAS domain YC6258_RS19435 PF03707 Bacterial signalling protein N terminal repeat YC6258_RS19440 PF16325 Peptidase family U32 C-terminal domain YC6258_RS19440 PF01136 Peptidase family U32 YC6258_RS19460 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) YC6258_RS19460 PF00128 Alpha amylase, catalytic domain YC6258_RS19460 PF02806 Alpha amylase, C-terminal all-beta domain YC6258_RS19480 PF02567 Phenazine biosynthesis-like protein YC6258_RS19485 PF02272 DHHA1 domain YC6258_RS19485 PF01411 tRNA synthetases class II (A) YC6258_RS19485 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain YC6258_RS19490 PF00202 Aminotransferase class-III YC6258_RS19495 PF00892 EamA-like transporter family YC6258_RS19505 PF02127 Aminopeptidase I zinc metalloprotease (M18) YC6258_RS19515 PF00117 Glutamine amidotransferase class-I YC6258_RS19520 PF00425 chorismate binding enzyme YC6258_RS19520 PF04715 Anthranilate synthase component I, N terminal region YC6258_RS19525 PF01371 Trp repressor protein YC6258_RS19530 PF00117 Glutamine amidotransferase class-I YC6258_RS19535 PF00591 Glycosyl transferase family, a/b domain YC6258_RS19535 PF02885 Glycosyl transferase family, helical bundle domain YC6258_RS19540 PF00218 Indole-3-glycerol phosphate synthase YC6258_RS19550 PF00027 Cyclic nucleotide-binding domain YC6258_RS19550 PF13545 Crp-like helix-turn-helix domain YC6258_RS19555 PF02566 OsmC-like protein YC6258_RS19560 PF02675 S-adenosylmethionine decarboxylase YC6258_RS19565 PF00899 ThiF family YC6258_RS19570 PF17827 PrmC N-terminal domain YC6258_RS19570 PF13847 Methyltransferase domain YC6258_RS19575 PF00472 RF-1 domain YC6258_RS19575 PF03462 PCRF domain YC6258_RS19580 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain YC6258_RS19580 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain YC6258_RS19580 PF01488 Shikimate / quinate 5-dehydrogenase YC6258_RS19590 PF03550 Outer membrane lipoprotein LolB YC6258_RS19595 PF08544 GHMP kinases C terminal YC6258_RS19595 PF00288 GHMP kinases N terminal domain YC6258_RS19600 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase YC6258_RS19600 PF14572 Phosphoribosyl synthetase-associated domain YC6258_RS19605 PF01386 Ribosomal L25p family YC6258_RS19605 PF14693 Ribosomal protein TL5, C-terminal domain YC6258_RS19610 PF01195 Peptidyl-tRNA hydrolase YC6258_RS19615 PF06071 Protein of unknown function (DUF933) YC6258_RS19615 PF01926 50S ribosome-binding GTPase YC6258_RS19635 PF00581 Rhodanese-like domain YC6258_RS19640 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YC6258_RS19650 PF00753 Metallo-beta-lactamase superfamily YC6258_RS19655 PF01740 STAS domain YC6258_RS19655 PF00916 Sulfate permease family YC6258_RS19660 PF00158 Sigma-54 interaction domain YC6258_RS19660 PF00072 Response regulator receiver domain YC6258_RS19660 PF02954 Bacterial regulatory protein, Fis family YC6258_RS19670 PF01842 ACT domain YC6258_RS19670 PF00551 Formyl transferase YC6258_RS19675 PF01258 Prokaryotic dksA/traR C4-type zinc finger YC6258_RS19685 PF00072 Response regulator receiver domain YC6258_RS19695 PF00817 impB/mucB/samB family YC6258_RS19695 PF11799 impB/mucB/samB family C-terminal domain YC6258_RS19695 PF11798 IMS family HHH motif YC6258_RS19700 PF01472 PUA domain YC6258_RS19700 PF00696 Amino acid kinase family YC6258_RS19705 PF01018 GTP1/OBG YC6258_RS19705 PF01926 50S ribosome-binding GTPase YC6258_RS19710 PF01016 Ribosomal L27 protein YC6258_RS19715 PF00829 Ribosomal prokaryotic L21 protein YC6258_RS19720 PF00348 Polyprenyl synthetase YC6258_RS19735 PF04321 RmlD substrate binding domain YC6258_RS19740 PF00436 Single-strand binding protein family YC6258_RS19745 PF07690 Major Facilitator Superfamily YC6258_RS19750 PF17755 UvrA DNA-binding domain YC6258_RS19750 PF17760 UvrA interaction domain YC6258_RS19760 PF01293 Phosphoenolpyruvate carboxykinase YC6258_RS19765 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS19765 PF00672 HAMP domain YC6258_RS19765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS19775 PF00575 S1 RNA binding domain YC6258_RS19780 PF02224 Cytidylate kinase YC6258_RS19785 PF02153 Prephenate dehydrogenase YC6258_RS19790 PF00155 Aminotransferase class I and II YC6258_RS19795 PF01842 ACT domain YC6258_RS19795 PF01817 Chorismate mutase type II YC6258_RS19795 PF00800 Prephenate dehydratase YC6258_RS19800 PF00266 Aminotransferase class-V YC6258_RS19805 PF03989 DNA gyrase C-terminal domain, beta-propeller YC6258_RS19805 PF00521 DNA gyrase/topoisomerase IV, subunit A YC6258_RS19810 PF01979 Amidohydrolase family YC6258_RS19820 PF13419 Haloacid dehalogenase-like hydrolase YC6258_RS19825 PF00106 short chain dehydrogenase YC6258_RS19830 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS19835 PF01026 TatD related DNase YC6258_RS19840 PF02146 Sir2 family YC6258_RS19845 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region YC6258_RS19845 PF01243 Pyridoxamine 5'-phosphate oxidase YC6258_RS19855 PF01479 S4 domain YC6258_RS19855 PF00849 RNA pseudouridylate synthase YC6258_RS19865 PF02616 Segregation and condensation protein ScpA YC6258_RS19870 PF01300 Telomere recombination YC6258_RS19875 PF02811 PHP domain YC6258_RS19880 PF03795 YCII-related domain YC6258_RS19895 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YC6258_RS19900 PF01266 FAD dependent oxidoreductase YC6258_RS19900 PF05430 S-adenosyl-L-methionine-dependent methyltransferase YC6258_RS19905 PF03449 Transcription elongation factor, N-terminal YC6258_RS19905 PF01272 Transcription elongation factor, GreA/GreB, C-term YC6258_RS19910 PF00158 Sigma-54 interaction domain YC6258_RS19910 PF18024 Helix-turn-helix domain YC6258_RS19920 PF01569 PAP2 superfamily YC6258_RS19925 PF01569 PAP2 superfamily YC6258_RS19950 PF01142 tRNA pseudouridine synthase D (TruD) YC6258_RS19955 PF02542 YgbB family YC6258_RS19960 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YC6258_RS19965 PF04977 Septum formation initiator YC6258_RS19985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YC6258_RS19990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YC6258_RS19990 PF00005 ABC transporter YC6258_RS19995 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YC6258_RS19995 PF00005 ABC transporter YC6258_RS20000 PF12911 N-terminal TM domain of oligopeptide transport permease C YC6258_RS20000 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS20005 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS20010 PF00561 alpha/beta hydrolase fold YC6258_RS20015 PF03472 Autoinducer binding domain YC6258_RS20015 PF00196 Bacterial regulatory proteins, luxR family YC6258_RS20020 PF00561 alpha/beta hydrolase fold YC6258_RS20025 PF03969 AFG1-like ATPase YC6258_RS20035 PF01507 Phosphoadenosine phosphosulfate reductase family YC6258_RS20040 PF00009 Elongation factor Tu GTP binding domain YC6258_RS20045 PF01784 NIF3 (NGG1p interacting factor 3) YC6258_RS20050 PF13180 PDZ domain YC6258_RS20055 PF00155 Aminotransferase class I and II YC6258_RS20060 PF00815 Histidinol dehydrogenase YC6258_RS20065 PF01634 ATP phosphoribosyltransferase YC6258_RS20070 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YC6258_RS20080 PF01699 Sodium/calcium exchanger protein YC6258_RS20095 PF12399 Branched-chain amino acid ATP-binding cassette transporter YC6258_RS20095 PF00005 ABC transporter YC6258_RS20100 PF00309 Sigma-54 factor, Activator interacting domain (AID) YC6258_RS20100 PF04963 Sigma-54 factor, core binding domain YC6258_RS20100 PF04552 Sigma-54, DNA binding domain YC6258_RS20105 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein YC6258_RS20110 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YC6258_RS20115 PF03668 P-loop ATPase protein family YC6258_RS20120 PF00381 PTS HPr component phosphorylation site YC6258_RS20125 PF00571 CBS domain YC6258_RS20125 PF01769 Divalent cation transporter YC6258_RS20125 PF03448 MgtE intracellular N domain YC6258_RS20130 PF04751 Protein of unknown function (DUF615) YC6258_RS20140 PF00005 ABC transporter YC6258_RS20140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YC6258_RS20145 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS20145 PF12911 N-terminal TM domain of oligopeptide transport permease C YC6258_RS20150 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS20155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YC6258_RS20160 PF04445 Putative SAM-dependent methyltransferase YC6258_RS20170 PF02673 Bacitracin resistance protein BacA YC6258_RS20175 PF00814 Glycoprotease family YC6258_RS20185 PF05191 Adenylate kinase, active site lid YC6258_RS20190 PF00263 Bacterial type II and III secretion system protein YC6258_RS20190 PF03958 Bacterial type II/III secretion system short domain YC6258_RS20195 PF11356 Type II secretion system protein C YC6258_RS20205 PF00118 TCP-1/cpn60 chaperonin family YC6258_RS20210 PF00166 Chaperonin 10 Kd subunit YC6258_RS20215 PF04186 FxsA cytoplasmic membrane protein YC6258_RS20220 PF04461 Protein of unknown function (DUF520) YC6258_RS20230 PF08546 Ketopantoate reductase PanE/ApbA C terminal YC6258_RS20230 PF02558 Ketopantoate reductase PanE/ApbA YC6258_RS20235 PF08448 PAS fold YC6258_RS20235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS20235 PF08447 PAS fold YC6258_RS20240 PF01177 Asp/Glu/Hydantoin racemase YC6258_RS20255 PF08669 Glycine cleavage T-protein C-terminal barrel domain YC6258_RS20255 PF01571 Aminomethyltransferase folate-binding domain YC6258_RS20260 PF01597 Glycine cleavage H-protein YC6258_RS20265 PF02347 Glycine cleavage system P-protein YC6258_RS20275 PF00733 Asparagine synthase YC6258_RS20275 PF13537 Glutamine amidotransferase domain YC6258_RS20290 PF00668 Condensation domain YC6258_RS20290 PF13193 AMP-binding enzyme C-terminal domain YC6258_RS20290 PF00501 AMP-binding enzyme YC6258_RS20290 PF00550 Phosphopantetheine attachment site YC6258_RS20290 PF00975 Thioesterase domain YC6258_RS20300 PF00550 Phosphopantetheine attachment site YC6258_RS20300 PF02801 Beta-ketoacyl synthase, C-terminal domain YC6258_RS20300 PF00109 Beta-ketoacyl synthase, N-terminal domain YC6258_RS20300 PF16197 Ketoacyl-synthetase C-terminal extension YC6258_RS20300 PF00668 Condensation domain YC6258_RS20300 PF00698 Acyl transferase domain YC6258_RS20305 PF00764 Arginosuccinate synthase YC6258_RS20310 PF00701 Dihydrodipicolinate synthetase family YC6258_RS20320 PF02595 Glycerate kinase family YC6258_RS20325 PF00128 Alpha amylase, catalytic domain YC6258_RS20350 PF07992 Pyridine nucleotide-disulphide oxidoreductase YC6258_RS20350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YC6258_RS20355 PF06865 Pyrimidine/purine nucleoside phosphorylase YC6258_RS20360 PF05552 Conserved TM helix YC6258_RS20360 PF00924 Mechanosensitive ion channel YC6258_RS20365 PF05951 Bacterial protein of unknown function (DUF882) YC6258_RS20420 PF05336 L-rhamnose mutarotase YC6258_RS20425 PF02653 Branched-chain amino acid transport system / permease component YC6258_RS20430 PF02653 Branched-chain amino acid transport system / permease component YC6258_RS20435 PF00005 ABC transporter YC6258_RS20445 PF00455 DeoR C terminal sensor domain YC6258_RS20445 PF08220 DeoR-like helix-turn-helix domain YC6258_RS20450 PF00596 Class II Aldolase and Adducin N-terminal domain YC6258_RS20455 PF01261 Xylose isomerase-like TIM barrel YC6258_RS20470 PF05114 Protein of unknown function (DUF692) YC6258_RS20480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS20490 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain YC6258_RS20490 PF02805 Metal binding domain of Ada YC6258_RS20490 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain YC6258_RS20490 PF12833 Helix-turn-helix domain YC6258_RS20495 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA YC6258_RS20500 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain YC6258_RS20500 PF00730 HhH-GPD superfamily base excision DNA repair protein YC6258_RS20520 PF01810 LysE type translocator YC6258_RS20550 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YC6258_RS20555 PF02798 Glutathione S-transferase, N-terminal domain YC6258_RS20555 PF00043 Glutathione S-transferase, C-terminal domain YC6258_RS20560 PF00581 Rhodanese-like domain YC6258_RS20565 PF00578 AhpC/TSA family YC6258_RS20570 PF01227 GTP cyclohydrolase I YC6258_RS20575 PF02152 Dihydroneopterin aldolase YC6258_RS20605 PF05175 Methyltransferase small domain YC6258_RS20605 PF08468 Methyltransferase small domain N-terminal YC6258_RS20610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS20610 PF03466 LysR substrate binding domain YC6258_RS20615 PF00085 Thioredoxin YC6258_RS20620 PF16187 Middle or third domain of peptidase_M16 YC6258_RS20620 PF05193 Peptidase M16 inactive domain YC6258_RS20620 PF00675 Insulinase (Peptidase family M16) YC6258_RS20635 PF00378 Enoyl-CoA hydratase/isomerase YC6258_RS20640 PF08411 Exonuclease C-terminal YC6258_RS20640 PF00929 Exonuclease YC6258_RS20685 PF06964 Alpha-L-arabinofuranosidase C-terminal domain YC6258_RS20700 PF01063 Amino-transferase class IV YC6258_RS20710 PF02311 AraC-like ligand binding domain YC6258_RS20710 PF12833 Helix-turn-helix domain YC6258_RS20715 PF03591 AzlC protein YC6258_RS20725 PF00141 Peroxidase YC6258_RS20735 PF00313 'Cold-shock' DNA-binding domain YC6258_RS20755 PF14765 Polyketide synthase dehydratase YC6258_RS20755 PF08659 KR domain YC6258_RS20755 PF00109 Beta-ketoacyl synthase, N-terminal domain YC6258_RS20755 PF00698 Acyl transferase domain YC6258_RS20755 PF16197 Ketoacyl-synthetase C-terminal extension YC6258_RS20755 PF00550 Phosphopantetheine attachment site YC6258_RS20755 PF02801 Beta-ketoacyl synthase, C-terminal domain YC6258_RS20760 PF16197 Ketoacyl-synthetase C-terminal extension YC6258_RS20760 PF00698 Acyl transferase domain YC6258_RS20760 PF00109 Beta-ketoacyl synthase, N-terminal domain YC6258_RS20760 PF02801 Beta-ketoacyl synthase, C-terminal domain YC6258_RS20760 PF08659 KR domain YC6258_RS20760 PF00550 Phosphopantetheine attachment site YC6258_RS20765 PF00698 Acyl transferase domain YC6258_RS20765 PF03060 Nitronate monooxygenase YC6258_RS20770 PF00128 Alpha amylase, catalytic domain YC6258_RS20775 PF01258 Prokaryotic dksA/traR C4-type zinc finger YC6258_RS20780 PF00437 Type II/IV secretion system protein YC6258_RS20835 PF04955 HupE / UreJ protein YC6258_RS20840 PF02492 CobW/HypB/UreG, nucleotide-binding domain YC6258_RS20845 PF01730 UreF YC6258_RS20850 PF05194 UreE urease accessory protein, C-terminal domain YC6258_RS20850 PF02814 UreE urease accessory protein, N-terminal domain YC6258_RS20855 PF00449 Urease alpha-subunit, N-terminal domain YC6258_RS20855 PF01979 Amidohydrolase family YC6258_RS20860 PF00699 Urease beta subunit YC6258_RS20865 PF00547 Urease, gamma subunit YC6258_RS20870 PF01774 UreD urease accessory protein YC6258_RS20875 PF00005 ABC transporter YC6258_RS20880 PF00005 ABC transporter YC6258_RS20880 PF12399 Branched-chain amino acid ATP-binding cassette transporter YC6258_RS20890 PF02653 Branched-chain amino acid transport system / permease component YC6258_RS20900 PF07581 The GLUG motif YC6258_RS20900 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) YC6258_RS20925 PF00072 Response regulator receiver domain YC6258_RS20925 PF00486 Transcriptional regulatory protein, C terminal YC6258_RS20930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS20930 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS20930 PF00072 Response regulator receiver domain YC6258_RS20930 PF00497 Bacterial extracellular solute-binding proteins, family 3 YC6258_RS20935 PF03352 Methyladenine glycosylase YC6258_RS20950 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ YC6258_RS20955 PF00440 Bacterial regulatory proteins, tetR family YC6258_RS20955 PF08362 YcdC-like protein, C-terminal region YC6258_RS20960 PF00005 ABC transporter YC6258_RS20970 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YC6258_RS20975 PF01479 S4 domain YC6258_RS20975 PF00849 RNA pseudouridylate synthase YC6258_RS20990 PF00899 ThiF family YC6258_RS21015 PF06794 Uncharacterised protein family (UPF0270) YC6258_RS21025 PF12826 Helix-hairpin-helix motif YC6258_RS21025 PF00533 BRCA1 C Terminus (BRCT) domain YC6258_RS21025 PF01653 NAD-dependent DNA ligase adenylation domain YC6258_RS21025 PF03120 NAD-dependent DNA ligase OB-fold domain YC6258_RS21025 PF03119 NAD-dependent DNA ligase C4 zinc finger domain YC6258_RS21030 PF04354 ZipA, C-terminal FtsZ-binding domain YC6258_RS21035 PF02463 RecF/RecN/SMC N terminal domain YC6258_RS21045 PF03918 Cytochrome C biogenesis protein YC6258_RS21050 PF08534 Redoxin YC6258_RS21055 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal YC6258_RS21055 PF01578 Cytochrome C assembly protein YC6258_RS21060 PF03100 CcmE YC6258_RS21065 PF01578 Cytochrome C assembly protein YC6258_RS21070 PF03379 CcmB protein YC6258_RS21075 PF00005 ABC transporter YC6258_RS21085 PF01312 FlhB HrpN YscU SpaS Family YC6258_RS21095 PF01547 Bacterial extracellular solute-binding protein YC6258_RS21100 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain YC6258_RS21100 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase YC6258_RS21125 PF02646 RmuC family YC6258_RS21135 PF00710 Asparaginase, N-terminal YC6258_RS21135 PF17763 Glutaminase/Asparaginase C-terminal domain YC6258_RS21145 PF08482 ATP-dependent helicase C-terminal YC6258_RS21145 PF00270 DEAD/DEAH box helicase YC6258_RS21145 PF00271 Helicase conserved C-terminal domain YC6258_RS21145 PF04408 Helicase associated domain (HA2) YC6258_RS21150 PF01219 Prokaryotic diacylglycerol kinase YC6258_RS21160 PF01022 Bacterial regulatory protein, arsR family YC6258_RS21170 PF03739 Lipopolysaccharide export system permease LptF/LptG YC6258_RS21175 PF03739 Lipopolysaccharide export system permease LptF/LptG YC6258_RS21180 PF00883 Cytosol aminopeptidase family, catalytic domain YC6258_RS21180 PF02789 Cytosol aminopeptidase family, N-terminal domain YC6258_RS21185 PF04055 Radical SAM superfamily YC6258_RS21185 PF18693 TRAM domain YC6258_RS21185 PF00919 Uncharacterized protein family UPF0004 YC6258_RS21190 PF01132 Elongation factor P (EF-P) OB domain YC6258_RS21190 PF08207 Elongation factor P (EF-P) KOW-like domain YC6258_RS21190 PF09285 Elongation factor P, C-terminal YC6258_RS21195 PF01546 Peptidase family M20/M25/M40 YC6258_RS21195 PF07687 Peptidase dimerisation domain YC6258_RS21200 PF13847 Methyltransferase domain YC6258_RS21215 PF00313 'Cold-shock' DNA-binding domain YC6258_RS21220 PF04102 SlyX YC6258_RS21230 PF01743 Poly A polymerase head domain YC6258_RS21230 PF00571 CBS domain YC6258_RS21235 PF02657 Fe-S metabolism associated domain YC6258_RS21240 PF01883 Iron-sulfur cluster assembly protein YC6258_RS21245 PF01521 Iron-sulphur cluster biosynthesis YC6258_RS21250 PF00266 Aminotransferase class-V YC6258_RS21255 PF01458 Uncharacterized protein family (UPF0051) YC6258_RS21260 PF00005 ABC transporter YC6258_RS21265 PF01458 Uncharacterized protein family (UPF0051) YC6258_RS21270 PF00266 Aminotransferase class-V YC6258_RS21275 PF02082 Transcriptional regulator YC6258_RS21300 PF02119 Flagellar P-ring protein YC6258_RS21305 PF02107 Flagellar L-ring protein YC6258_RS21310 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YC6258_RS21310 PF00460 Flagella basal body rod protein YC6258_RS21315 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YC6258_RS21315 PF00460 Flagella basal body rod protein YC6258_RS21325 PF07559 Flagellar basal body protein FlaE YC6258_RS21325 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YC6258_RS21325 PF00460 Flagella basal body rod protein YC6258_RS21335 PF00460 Flagella basal body rod protein YC6258_RS21335 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YC6258_RS21340 PF00460 Flagella basal body rod protein YC6258_RS21350 PF00501 AMP-binding enzyme YC6258_RS21365 PF16197 Ketoacyl-synthetase C-terminal extension YC6258_RS21365 PF02801 Beta-ketoacyl synthase, C-terminal domain YC6258_RS21365 PF00975 Thioesterase domain YC6258_RS21365 PF14765 Polyketide synthase dehydratase YC6258_RS21365 PF00550 Phosphopantetheine attachment site YC6258_RS21365 PF00109 Beta-ketoacyl synthase, N-terminal domain YC6258_RS21365 PF08242 Methyltransferase domain YC6258_RS21375 PF00301 Rubredoxin YC6258_RS21400 PF03705 CheR methyltransferase, all-alpha domain YC6258_RS21400 PF01739 CheR methyltransferase, SAM binding domain YC6258_RS21405 PF01584 CheW-like domain YC6258_RS21405 PF00072 Response regulator receiver domain YC6258_RS21430 PF02769 AIR synthase related protein, C-terminal domain YC6258_RS21430 PF00586 AIR synthase related protein, N-terminal domain YC6258_RS21435 PF04608 Phosphatidylglycerophosphatase A YC6258_RS21440 PF02574 Homocysteine S-methyltransferase YC6258_RS21445 PF00324 Amino acid permease YC6258_RS21450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS21450 PF00672 HAMP domain YC6258_RS21450 PF02743 Cache domain YC6258_RS21455 PF00356 Bacterial regulatory proteins, lacI family YC6258_RS21465 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS21470 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS21475 PF00005 ABC transporter YC6258_RS21475 PF17912 MalK OB fold domain YC6258_RS21490 PF04298 Putative neutral zinc metallopeptidase YC6258_RS21495 PF02779 Transketolase, pyrimidine binding domain YC6258_RS21495 PF13292 1-deoxy-D-xylulose-5-phosphate synthase YC6258_RS21495 PF02780 Transketolase, C-terminal domain YC6258_RS21500 PF00348 Polyprenyl synthetase YC6258_RS21505 PF02609 Exonuclease VII small subunit YC6258_RS21510 PF01618 MotA/TolQ/ExbB proton channel family YC6258_RS21515 PF00691 OmpA family YC6258_RS21515 PF13677 Membrane MotB of proton-channel complex MotA/MotB YC6258_RS21525 PF01070 FMN-dependent dehydrogenase YC6258_RS21530 PF00067 Cytochrome P450 YC6258_RS21560 PF02608 ABC transporter substrate-binding protein PnrA-like YC6258_RS21565 PF02653 Branched-chain amino acid transport system / permease component YC6258_RS21570 PF02653 Branched-chain amino acid transport system / permease component YC6258_RS21575 PF00005 ABC transporter YC6258_RS21585 PF00266 Aminotransferase class-V YC6258_RS21590 PF01592 NifU-like N terminal domain YC6258_RS21590 PF04324 BFD-like [2Fe-2S] binding domain YC6258_RS21590 PF01106 NifU-like domain YC6258_RS21595 PF01521 Iron-sulphur cluster biosynthesis YC6258_RS21600 PF03600 Citrate transporter YC6258_RS21605 PF05099 Tellurite resistance protein TerB YC6258_RS21605 PF00226 DnaJ domain YC6258_RS21625 PF00270 DEAD/DEAH box helicase YC6258_RS21625 PF00271 Helicase conserved C-terminal domain YC6258_RS21625 PF16124 RecQ zinc-binding YC6258_RS21625 PF09382 RQC domain YC6258_RS21625 PF00570 HRDC domain YC6258_RS21650 PF16874 Glycosyl hydrolase family 36 C-terminal domain YC6258_RS21650 PF16875 Glycosyl hydrolase family 36 N-terminal domain YC6258_RS21655 PF12833 Helix-turn-helix domain YC6258_RS21665 PF00498 FHA domain YC6258_RS21665 PF00563 EAL domain YC6258_RS21665 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS21670 PF00521 DNA gyrase/topoisomerase IV, subunit A YC6258_RS21670 PF03989 DNA gyrase C-terminal domain, beta-propeller YC6258_RS21680 PF01804 Penicillin amidase YC6258_RS21685 PF01292 Prokaryotic cytochrome b561 YC6258_RS21695 PF02441 Flavoprotein YC6258_RS21720 PF01042 Endoribonuclease L-PSP YC6258_RS21725 PF00128 Alpha amylase, catalytic domain YC6258_RS21725 PF03714 Bacterial pullanase-associated domain YC6258_RS21725 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) YC6258_RS21735 PF13654 AAA domain YC6258_RS21735 PF05362 Lon protease (S16) C-terminal proteolytic domain YC6258_RS21740 PF00303 Thymidylate synthase YC6258_RS21745 PF00072 Response regulator receiver domain YC6258_RS21745 PF00672 HAMP domain YC6258_RS21745 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS21745 PF01627 Hpt domain YC6258_RS21745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS21760 PF00196 Bacterial regulatory proteins, luxR family YC6258_RS21760 PF00072 Response regulator receiver domain YC6258_RS21765 PF16177 Acetyl-coenzyme A synthetase N-terminus YC6258_RS21765 PF00501 AMP-binding enzyme YC6258_RS21765 PF13193 AMP-binding enzyme C-terminal domain YC6258_RS21785 PF01769 Divalent cation transporter YC6258_RS21785 PF03448 MgtE intracellular N domain YC6258_RS21785 PF00571 CBS domain YC6258_RS21790 PF02525 Flavodoxin-like fold YC6258_RS21795 PF13409 Glutathione S-transferase, N-terminal domain YC6258_RS21810 PF01790 Prolipoprotein diacylglyceryl transferase YC6258_RS21815 PF01435 Peptidase family M48 YC6258_RS21820 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) YC6258_RS21820 PF02806 Alpha amylase, C-terminal all-beta domain YC6258_RS21820 PF00128 Alpha amylase, catalytic domain YC6258_RS21825 PF00128 Alpha amylase, catalytic domain YC6258_RS21825 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) YC6258_RS21830 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) YC6258_RS21835 PF02152 Dihydroneopterin aldolase YC6258_RS21840 PF00814 Glycoprotease family YC6258_RS21845 PF01165 Ribosomal protein S21 YC6258_RS21850 PF09424 Yqey-like protein YC6258_RS21855 PF01807 CHC2 zinc finger YC6258_RS21855 PF10410 DnaB-helicase binding domain of primase YC6258_RS21855 PF13662 Toprim domain YC6258_RS21855 PF08275 DNA primase catalytic core, N-terminal domain YC6258_RS21855 PF08278 DNA primase DnaG DnaB-binding YC6258_RS21860 PF04542 Sigma-70 region 2 YC6258_RS21860 PF04539 Sigma-70 region 3 YC6258_RS21860 PF04545 Sigma-70, region 4 YC6258_RS21860 PF00140 Sigma-70 factor, region 1.2 YC6258_RS21860 PF04546 Sigma-70, non-essential region YC6258_RS21860 PF03979 Sigma-70 factor, region 1.1 YC6258_RS21865 PF12221 Bacterial membrane protein N terminal YC6258_RS21865 PF01145 SPFH domain / Band 7 family YC6258_RS21870 PF01145 SPFH domain / Band 7 family YC6258_RS21875 PF16916 Dimerisation domain of Zinc Transporter YC6258_RS21875 PF01545 Cation efflux family YC6258_RS21995 PF14659 Phage integrase, N-terminal SAM-like domain YC6258_RS21995 PF00589 Phage integrase family YC6258_RS22010 PF01555 DNA methylase YC6258_RS22020 PF00271 Helicase conserved C-terminal domain YC6258_RS22020 PF00176 SNF2 family N-terminal domain YC6258_RS22065 PF00933 Glycosyl hydrolase family 3 N terminal domain YC6258_RS22075 PF12833 Helix-turn-helix domain YC6258_RS22080 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS22080 PF17158 Membrane-associated sensor, integral membrane domain YC6258_RS22085 PF03466 LysR substrate binding domain YC6258_RS22085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS22095 PF02798 Glutathione S-transferase, N-terminal domain YC6258_RS22095 PF00043 Glutathione S-transferase, C-terminal domain YC6258_RS22105 PF00939 Sodium:sulfate symporter transmembrane region YC6258_RS22115 PF00440 Bacterial regulatory proteins, tetR family YC6258_RS22115 PF16925 Tetracyclin repressor-like, C-terminal domain YC6258_RS22125 PF00171 Aldehyde dehydrogenase family YC6258_RS22125 PF00465 Iron-containing alcohol dehydrogenase YC6258_RS22130 PF04055 Radical SAM superfamily YC6258_RS22135 PF01361 Tautomerase enzyme YC6258_RS22145 PF02696 Uncharacterized ACR, YdiU/UPF0061 family YC6258_RS22150 PF07992 Pyridine nucleotide-disulphide oxidoreductase YC6258_RS22170 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain YC6258_RS22170 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain YC6258_RS22190 PF00005 ABC transporter YC6258_RS22210 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS22215 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS22225 PF00480 ROK family YC6258_RS22235 PF12724 Flavodoxin domain YC6258_RS22255 PF07690 Major Facilitator Superfamily YC6258_RS22260 PF00005 ABC transporter YC6258_RS22265 PF01032 FecCD transport family YC6258_RS22270 PF01497 Periplasmic binding protein YC6258_RS22290 PF02653 Branched-chain amino acid transport system / permease component YC6258_RS22295 PF02653 Branched-chain amino acid transport system / permease component YC6258_RS22300 PF00005 ABC transporter YC6258_RS22305 PF13407 Periplasmic binding protein domain YC6258_RS22310 PF00857 Isochorismatase family YC6258_RS22315 PF00106 short chain dehydrogenase YC6258_RS22325 PF04909 Amidohydrolase YC6258_RS22330 PF00302 Chloramphenicol acetyltransferase YC6258_RS22335 PF04185 Phosphoesterase family YC6258_RS22340 PF03413 Peptidase propeptide and YPEB domain YC6258_RS22340 PF01447 Thermolysin metallopeptidase, catalytic domain YC6258_RS22340 PF02868 Thermolysin metallopeptidase, alpha-helical domain YC6258_RS22340 PF04151 Bacterial pre-peptidase C-terminal domain YC6258_RS22340 PF07504 Fungalysin/Thermolysin Propeptide Motif YC6258_RS22345 PF00465 Iron-containing alcohol dehydrogenase YC6258_RS22350 PF01212 Beta-eliminating lyase YC6258_RS22365 PF00150 Cellulase (glycosyl hydrolase family 5) YC6258_RS22365 PF02013 Cellulose or protein binding domain YC6258_RS22375 PF08240 Alcohol dehydrogenase GroES-like domain YC6258_RS22375 PF00107 Zinc-binding dehydrogenase YC6258_RS22385 PF00196 Bacterial regulatory proteins, luxR family YC6258_RS22385 PF17874 MalT-like TPR region YC6258_RS22390 PF03707 Bacterial signalling protein N terminal repeat YC6258_RS22390 PF00563 EAL domain YC6258_RS22390 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS22390 PF13188 PAS domain YC6258_RS22400 PF13407 Periplasmic binding protein domain YC6258_RS22410 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YC6258_RS22415 PF00581 Rhodanese-like domain YC6258_RS22420 PF02798 Glutathione S-transferase, N-terminal domain YC6258_RS22435 PF00905 Penicillin binding protein transpeptidase domain YC6258_RS22435 PF00912 Transglycosylase YC6258_RS22435 PF06832 Penicillin-Binding Protein C-terminus Family YC6258_RS22440 PF11974 Bacterial alpha-2-macroglobulin MG3 domain YC6258_RS22440 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain YC6258_RS22440 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain YC6258_RS22440 PF07703 Alpha-2-macroglobulin bait region domain YC6258_RS22440 PF01835 MG2 domain YC6258_RS22440 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain YC6258_RS22440 PF00207 Alpha-2-macroglobulin family YC6258_RS22440 PF17962 Bacterial macroglobulin domain 6 YC6258_RS22455 PF09618 CRISPR-associated protein (Cas_Csy4) YC6258_RS22460 PF09615 CRISPR-associated protein (Cas_Csy3) YC6258_RS22465 PF09614 CRISPR-associated protein (Cas_Csy2) YC6258_RS22470 PF09611 CRISPR-associated protein (Cas_Csy1) YC6258_RS22480 PF01850 PIN domain YC6258_RS22485 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin YC6258_RS22495 PF01867 CRISPR associated protein Cas1 YC6258_RS22505 PF00392 Bacterial regulatory proteins, gntR family YC6258_RS22505 PF07729 FCD domain YC6258_RS22510 PF03480 Bacterial extracellular solute-binding protein, family 7 YC6258_RS22520 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component YC6258_RS22525 PF13378 Enolase C-terminal domain-like YC6258_RS22525 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YC6258_RS22530 PF08125 Mannitol dehydrogenase C-terminal domain YC6258_RS22530 PF01232 Mannitol dehydrogenase Rossmann domain YC6258_RS22535 PF02614 Glucuronate isomerase YC6258_RS22540 PF08362 YcdC-like protein, C-terminal region YC6258_RS22540 PF00440 Bacterial regulatory proteins, tetR family YC6258_RS22545 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster YC6258_RS22545 PF07992 Pyridine nucleotide-disulphide oxidoreductase YC6258_RS22550 PF01180 Dihydroorotate dehydrogenase YC6258_RS22580 PF02801 Beta-ketoacyl synthase, C-terminal domain YC6258_RS22580 PF00109 Beta-ketoacyl synthase, N-terminal domain YC6258_RS22585 PF07977 FabA-like domain YC6258_RS22605 PF00501 AMP-binding enzyme YC6258_RS22605 PF00550 Phosphopantetheine attachment site YC6258_RS22605 PF00668 Condensation domain YC6258_RS22605 PF13193 AMP-binding enzyme C-terminal domain YC6258_RS22610 PF14765 Polyketide synthase dehydratase YC6258_RS22610 PF02801 Beta-ketoacyl synthase, C-terminal domain YC6258_RS22610 PF00109 Beta-ketoacyl synthase, N-terminal domain YC6258_RS22610 PF16197 Ketoacyl-synthetase C-terminal extension YC6258_RS22610 PF00550 Phosphopantetheine attachment site YC6258_RS22610 PF00668 Condensation domain YC6258_RS22610 PF13193 AMP-binding enzyme C-terminal domain YC6258_RS22610 PF00501 AMP-binding enzyme YC6258_RS22610 PF08659 KR domain YC6258_RS22620 PF00698 Acyl transferase domain YC6258_RS22620 PF03060 Nitronate monooxygenase YC6258_RS22630 PF00155 Aminotransferase class I and II YC6258_RS22630 PF00550 Phosphopantetheine attachment site YC6258_RS22640 PF16197 Ketoacyl-synthetase C-terminal extension YC6258_RS22640 PF02801 Beta-ketoacyl synthase, C-terminal domain YC6258_RS22640 PF08659 KR domain YC6258_RS22640 PF00550 Phosphopantetheine attachment site YC6258_RS22640 PF14765 Polyketide synthase dehydratase YC6258_RS22640 PF00109 Beta-ketoacyl synthase, N-terminal domain YC6258_RS22655 PF03472 Autoinducer binding domain YC6258_RS22655 PF00196 Bacterial regulatory proteins, luxR family YC6258_RS22680 PF02203 Tar ligand binding domain homologue YC6258_RS22680 PF00672 HAMP domain YC6258_RS22680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS22695 PF00724 NADH:flavin oxidoreductase / NADH oxidase family YC6258_RS22725 PF07726 ATPase family associated with various cellular activities (AAA) YC6258_RS22725 PF17863 AAA lid domain YC6258_RS22745 PF05661 Protein of unknown function (DUF808) YC6258_RS22765 PF17773 UPF0176 acylphosphatase like domain YC6258_RS22765 PF00581 Rhodanese-like domain YC6258_RS22775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS22775 PF00672 HAMP domain YC6258_RS22780 PF00072 Response regulator receiver domain YC6258_RS22790 PF01584 CheW-like domain YC6258_RS22790 PF02895 Signal transducing histidine kinase, homodimeric domain YC6258_RS22790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS22790 PF01627 Hpt domain YC6258_RS22790 PF07194 P2 response regulator binding domain YC6258_RS22795 PF02203 Tar ligand binding domain homologue YC6258_RS22795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS22795 PF00672 HAMP domain YC6258_RS22800 PF01584 CheW-like domain YC6258_RS22805 PF03705 CheR methyltransferase, all-alpha domain YC6258_RS22805 PF01739 CheR methyltransferase, SAM binding domain YC6258_RS22810 PF03975 CheD chemotactic sensory transduction YC6258_RS22815 PF01339 CheB methylesterase YC6258_RS22815 PF00072 Response regulator receiver domain YC6258_RS22820 PF04337 Protein of unknown function, DUF480 YC6258_RS22830 PF13509 S1 domain YC6258_RS22830 PF17783 CvfB-like winged helix domain YC6258_RS22840 PF03485 Arginyl tRNA synthetase N terminal domain YC6258_RS22840 PF05746 DALR anticodon binding domain YC6258_RS22840 PF00750 tRNA synthetases class I (R) YC6258_RS22845 PF00664 ABC transporter transmembrane region YC6258_RS22845 PF00005 ABC transporter YC6258_RS22870 PF00501 AMP-binding enzyme YC6258_RS22890 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain YC6258_RS22890 PF00391 PEP-utilising enzyme, mobile domain YC6258_RS22905 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region YC6258_RS22910 PF01541 GIY-YIG catalytic domain YC6258_RS22925 PF07859 alpha/beta hydrolase fold YC6258_RS22950 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain YC6258_RS22950 PF02805 Metal binding domain of Ada YC6258_RS22950 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain YC6258_RS22950 PF12833 Helix-turn-helix domain YC6258_RS22955 PF03061 Thioesterase superfamily YC6258_RS22960 PF00501 AMP-binding enzyme YC6258_RS22965 PF13378 Enolase C-terminal domain-like YC6258_RS22970 PF00378 Enoyl-CoA hydratase/isomerase YC6258_RS22975 PF12697 Alpha/beta hydrolase family YC6258_RS22980 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YC6258_RS22980 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YC6258_RS22980 PF16582 Middle domain of thiamine pyrophosphate YC6258_RS22995 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YC6258_RS22995 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YC6258_RS23035 PF04055 Radical SAM superfamily YC6258_RS23050 PF17200 Single Cache domain 2 YC6258_RS23050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS23050 PF00672 HAMP domain YC6258_RS23060 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component YC6258_RS23075 PF00668 Condensation domain YC6258_RS23075 PF13193 AMP-binding enzyme C-terminal domain YC6258_RS23075 PF00550 Phosphopantetheine attachment site YC6258_RS23075 PF00501 AMP-binding enzyme YC6258_RS23080 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YC6258_RS23080 PF07992 Pyridine nucleotide-disulphide oxidoreductase YC6258_RS23095 PF00202 Aminotransferase class-III YC6258_RS23100 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain YC6258_RS23100 PF00391 PEP-utilising enzyme, mobile domain YC6258_RS23115 PF02666 Phosphatidylserine decarboxylase YC6258_RS23120 PF00391 PEP-utilising enzyme, mobile domain YC6258_RS23120 PF02887 Pyruvate kinase, alpha/beta domain YC6258_RS23120 PF00224 Pyruvate kinase, barrel domain YC6258_RS23265 PF00005 ABC transporter YC6258_RS23300 PF01810 LysE type translocator YC6258_RS23305 PF04389 Peptidase family M28 YC6258_RS23305 PF02225 PA domain YC6258_RS23310 PF02080 TrkA-C domain YC6258_RS23310 PF00999 Sodium/hydrogen exchanger family YC6258_RS23310 PF03471 Transporter associated domain YC6258_RS23315 PF13417 Glutathione S-transferase, N-terminal domain YC6258_RS23325 PF12833 Helix-turn-helix domain YC6258_RS23340 PF00486 Transcriptional regulatory protein, C terminal YC6258_RS23340 PF00072 Response regulator receiver domain YC6258_RS23400 PF04324 BFD-like [2Fe-2S] binding domain YC6258_RS23400 PF00384 Molybdopterin oxidoreductase YC6258_RS23400 PF01568 Molydopterin dinucleotide binding domain YC6258_RS23400 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YC6258_RS23405 PF18267 Rubredoxin NAD+ reductase C-terminal domain YC6258_RS23405 PF01077 Nitrite and sulphite reductase 4Fe-4S domain YC6258_RS23405 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain YC6258_RS23405 PF04324 BFD-like [2Fe-2S] binding domain YC6258_RS23405 PF07992 Pyridine nucleotide-disulphide oxidoreductase YC6258_RS23410 PF13426 PAS domain YC6258_RS23410 PF13188 PAS domain YC6258_RS23410 PF00989 PAS fold YC6258_RS23410 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS23410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS23415 PF02954 Bacterial regulatory protein, Fis family YC6258_RS23415 PF00158 Sigma-54 interaction domain YC6258_RS23415 PF00072 Response regulator receiver domain YC6258_RS23420 PF01743 Poly A polymerase head domain YC6258_RS23420 PF12626 Polymerase A arginine-rich C-terminus YC6258_RS23420 PF12627 Probable RNA and SrmB- binding site of polymerase A YC6258_RS23425 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) YC6258_RS23430 PF02548 Ketopantoate hydroxymethyltransferase YC6258_RS23435 PF02569 Pantoate-beta-alanine ligase YC6258_RS23440 PF02261 Aspartate decarboxylase YC6258_RS23445 PF00342 Phosphoglucose isomerase YC6258_RS23460 PF07728 AAA domain (dynein-related subfamily) YC6258_RS23470 PF05762 VWA domain containing CoxE-like protein YC6258_RS23475 PF01970 Tripartite tricarboxylate transporter TctA family YC6258_RS23500 PF13732 Domain of unknown function (DUF4162) YC6258_RS23500 PF00005 ABC transporter YC6258_RS23520 PF01734 Patatin-like phospholipase YC6258_RS23530 PF00005 ABC transporter YC6258_RS23545 PF05985 Ethanolamine ammonia-lyase light chain (EutC) YC6258_RS23550 PF06751 Ethanolamine ammonia lyase large subunit (EutB) YC6258_RS23555 PF00575 S1 RNA binding domain YC6258_RS23555 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain YC6258_RS23555 PF01138 3' exoribonuclease family, domain 1 YC6258_RS23555 PF03725 3' exoribonuclease family, domain 2 YC6258_RS23555 PF00013 KH domain YC6258_RS23560 PF00312 Ribosomal protein S15 YC6258_RS23565 PF09157 Pseudouridine synthase II TruB, C-terminal YC6258_RS23565 PF01509 TruB family pseudouridylate synthase (N terminal domain) YC6258_RS23565 PF16198 tRNA pseudouridylate synthase B C-terminal domain YC6258_RS23570 PF02033 Ribosome-binding factor A YC6258_RS23575 PF00009 Elongation factor Tu GTP binding domain YC6258_RS23575 PF11987 Translation-initiation factor 2 YC6258_RS23575 PF08364 Bacterial translation initiation factor IF-2 associated region YC6258_RS23575 PF04760 Translation initiation factor IF-2, N-terminal region YC6258_RS23580 PF00575 S1 RNA binding domain YC6258_RS23580 PF08529 NusA N-terminal domain YC6258_RS23580 PF13184 NusA-like KH domain YC6258_RS23585 PF02576 RimP N-terminal domain YC6258_RS23585 PF17384 RimP C-terminal SH3 domain YC6258_RS23600 PF03840 Preprotein translocase SecG subunit YC6258_RS23605 PF00121 Triosephosphate isomerase YC6258_RS23610 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain YC6258_RS23610 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III YC6258_RS23610 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II YC6258_RS23610 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YC6258_RS23615 PF00809 Pterin binding enzyme YC6258_RS23620 PF06480 FtsH Extracellular YC6258_RS23620 PF00004 ATPase family associated with various cellular activities (AAA) YC6258_RS23620 PF17862 AAA+ lid domain YC6258_RS23620 PF01434 Peptidase family M41 YC6258_RS23625 PF01728 FtsJ-like methyltransferase YC6258_RS23630 PF01985 CRS1 / YhbY (CRM) domain YC6258_RS23635 PF00892 EamA-like transporter family YC6258_RS23640 PF00464 Serine hydroxymethyltransferase YC6258_RS23645 PF00005 ABC transporter YC6258_RS23645 PF12848 ABC transporter YC6258_RS23660 PF00795 Carbon-nitrogen hydrolase YC6258_RS23670 PF10150 Ribonuclease E/G family YC6258_RS23670 PF00575 S1 RNA binding domain YC6258_RS23675 PF02545 Maf-like protein YC6258_RS23685 PF04085 rod shape-determining protein MreC YC6258_RS23695 PF02686 Glu-tRNAGln amidotransferase C subunit YC6258_RS23700 PF01425 Amidase YC6258_RS23705 PF02934 GatB/GatE catalytic domain YC6258_RS23705 PF02637 GatB domain YC6258_RS23710 PF00378 Enoyl-CoA hydratase/isomerase YC6258_RS23715 PF09084 NMT1/THI5 like YC6258_RS23720 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS23725 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS23730 PF00005 ABC transporter YC6258_RS23735 PF01979 Amidohydrolase family YC6258_RS23740 PF01546 Peptidase family M20/M25/M40 YC6258_RS23740 PF07687 Peptidase dimerisation domain YC6258_RS23745 PF00155 Aminotransferase class I and II YC6258_RS23755 PF00202 Aminotransferase class-III YC6258_RS23775 PF01274 Malate synthase YC6258_RS23800 PF03707 Bacterial signalling protein N terminal repeat YC6258_RS23800 PF00563 EAL domain YC6258_RS23800 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS23810 PF18073 Rubredoxin metal binding domain YC6258_RS23815 PF00588 SpoU rRNA Methylase family YC6258_RS23820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS23820 PF00497 Bacterial extracellular solute-binding proteins, family 3 YC6258_RS23820 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS23825 PF01228 Glycine radical YC6258_RS23825 PF02901 Pyruvate formate lyase-like YC6258_RS23830 PF01266 FAD dependent oxidoreductase YC6258_RS23835 PF13419 Haloacid dehalogenase-like hydrolase YC6258_RS23845 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YC6258_RS23845 PF01568 Molydopterin dinucleotide binding domain YC6258_RS23845 PF00384 Molybdopterin oxidoreductase YC6258_RS23850 PF01061 ABC-2 type transporter YC6258_RS23855 PF00005 ABC transporter YC6258_RS23865 PF10531 SLBB domain YC6258_RS23865 PF02563 Polysaccharide biosynthesis/export protein YC6258_RS23880 PF16363 GDP-mannose 4,6 dehydratase YC6258_RS23885 PF01370 NAD dependent epimerase/dehydratase family YC6258_RS23890 PF05159 Capsule polysaccharide biosynthesis protein YC6258_RS23895 PF00082 Subtilase family YC6258_RS23895 PF05922 Peptidase inhibitor I9 YC6258_RS23910 PF00009 Elongation factor Tu GTP binding domain YC6258_RS23915 PF01507 Phosphoadenosine phosphosulfate reductase family YC6258_RS23920 PF02080 TrkA-C domain YC6258_RS23920 PF03600 Citrate transporter YC6258_RS23925 PF00459 Inositol monophosphatase family YC6258_RS23930 PF02678 Pirin YC6258_RS23930 PF17954 Quercetinase C-terminal cupin domain YC6258_RS23935 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YC6258_RS23935 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YC6258_RS23940 PF08298 PrkA AAA domain YC6258_RS23940 PF06798 PrkA serine protein kinase C-terminal domain YC6258_RS23945 PF04285 Protein of unknown function (DUF444) YC6258_RS23950 PF04293 SpoVR like protein YC6258_RS23960 PF00474 Sodium:solute symporter family YC6258_RS23970 PF01380 SIS domain YC6258_RS23970 PF00571 CBS domain YC6258_RS23975 PF17657 Bacterial DNA polymerase III alpha subunit finger domain YC6258_RS23975 PF14480 DNA polymerase III polC-type N-terminus I YC6258_RS23975 PF11490 DNA polymerase III polC-type N-terminus II YC6258_RS23975 PF14579 Helix-hairpin-helix motif YC6258_RS23975 PF07733 Bacterial DNA polymerase III alpha NTPase domain YC6258_RS23975 PF02811 PHP domain YC6258_RS23975 PF00929 Exonuclease YC6258_RS23980 PF01418 Helix-turn-helix domain, rpiR family YC6258_RS23980 PF01380 SIS domain YC6258_RS23990 PF02653 Branched-chain amino acid transport system / permease component YC6258_RS23995 PF00005 ABC transporter YC6258_RS24000 PF13407 Periplasmic binding protein domain YC6258_RS24010 PF00672 HAMP domain YC6258_RS24010 PF02203 Tar ligand binding domain homologue YC6258_RS24010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS24015 PF00294 pfkB family carbohydrate kinase YC6258_RS24020 PF00205 Thiamine pyrophosphate enzyme, central domain YC6258_RS24020 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YC6258_RS24020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YC6258_RS24025 PF01261 Xylose isomerase-like TIM barrel YC6258_RS24030 PF00171 Aldehyde dehydrogenase family YC6258_RS24035 PF13407 Periplasmic binding protein domain YC6258_RS24045 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YC6258_RS24045 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YC6258_RS24055 PF03466 LysR substrate binding domain YC6258_RS24055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS24060 PF04962 KduI/IolB family YC6258_RS24065 PF13649 Methyltransferase domain YC6258_RS24070 PF08003 Protein of unknown function (DUF1698) YC6258_RS24075 PF00583 Acetyltransferase (GNAT) family YC6258_RS24100 PF01794 Ferric reductase like transmembrane component YC6258_RS24105 PF00174 Oxidoreductase molybdopterin binding domain YC6258_RS24110 PF01066 CDP-alcohol phosphatidyltransferase YC6258_RS24115 PF03466 LysR substrate binding domain YC6258_RS24115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS24120 PF01734 Patatin-like phospholipase YC6258_RS24125 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain YC6258_RS24125 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain YC6258_RS24135 PF01694 Rhomboid family YC6258_RS24145 PF01925 Sulfite exporter TauE/SafE YC6258_RS24155 PF07992 Pyridine nucleotide-disulphide oxidoreductase YC6258_RS24155 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YC6258_RS24170 PF10369 Small subunit of acetolactate synthase YC6258_RS24175 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YC6258_RS24175 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YC6258_RS24175 PF00205 Thiamine pyrophosphate enzyme, central domain YC6258_RS24180 PF00390 Malic enzyme, N-terminal domain YC6258_RS24180 PF03949 Malic enzyme, NAD binding domain YC6258_RS24190 PF07724 AAA domain (Cdc48 subfamily) YC6258_RS24190 PF00004 ATPase family associated with various cellular activities (AAA) YC6258_RS24190 PF17871 AAA lid domain YC6258_RS24190 PF02861 Clp amino terminal domain, pathogenicity island component YC6258_RS24190 PF10431 C-terminal, D2-small domain, of ClpB protein YC6258_RS24195 PF02578 Multi-copper polyphenol oxidoreductase laccase YC6258_RS24200 PF01479 S4 domain YC6258_RS24200 PF00849 RNA pseudouridylate synthase YC6258_RS24205 PF13525 Outer membrane lipoprotein YC6258_RS24210 PF02540 NAD synthase YC6258_RS24210 PF00795 Carbon-nitrogen hydrolase YC6258_RS24215 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS24215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS24220 PF00158 Sigma-54 interaction domain YC6258_RS24220 PF00072 Response regulator receiver domain YC6258_RS24220 PF02954 Bacterial regulatory protein, Fis family YC6258_RS24225 PF12019 Type II transport protein GspH YC6258_RS24225 PF07963 Prokaryotic N-terminal methylation motif YC6258_RS24230 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor YC6258_RS24230 PF07963 Prokaryotic N-terminal methylation motif YC6258_RS24240 PF05567 Neisseria PilC beta-propeller domain YC6258_RS24265 PF02401 LytB protein YC6258_RS24270 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YC6258_RS24275 PF06827 Zinc finger found in FPG and IleRS YC6258_RS24275 PF00133 tRNA synthetases class I (I, L, M and V) YC6258_RS24275 PF08264 Anticodon-binding domain of tRNA YC6258_RS24280 PF01687 Riboflavin kinase YC6258_RS24280 PF06574 FAD synthetase YC6258_RS24285 PF03023 Lipid II flippase MurJ YC6258_RS24290 PF01649 Ribosomal protein S20 YC6258_RS24295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS24295 PF03466 LysR substrate binding domain YC6258_RS24305 PF00226 DnaJ domain YC6258_RS24305 PF01556 DnaJ C terminal domain YC6258_RS24305 PF00684 DnaJ central domain YC6258_RS24310 PF00012 Hsp70 protein YC6258_RS24315 PF01025 GrpE YC6258_RS24320 PF02463 RecF/RecN/SMC N terminal domain YC6258_RS24325 PF01554 MatE YC6258_RS24330 PF00578 AhpC/TSA family YC6258_RS24335 PF01475 Ferric uptake regulator family YC6258_RS24340 PF04355 SmpA / OmlA family YC6258_RS24345 PF03658 RnfH family Ubiquitin YC6258_RS24350 PF03364 Polyketide cyclase / dehydrase and lipid transport YC6258_RS24355 PF00209 Sodium:neurotransmitter symporter family YC6258_RS24360 PF01668 SmpB protein YC6258_RS24380 PF12728 Helix-turn-helix domain YC6258_RS24405 PF13462 Thioredoxin YC6258_RS24405 PF06965 Na+/H+ antiporter 1 YC6258_RS24425 PF00394 Multicopper oxidase YC6258_RS24425 PF07732 Multicopper oxidase YC6258_RS24425 PF10518 TAT (twin-arginine translocation) pathway signal sequence YC6258_RS24425 PF07731 Multicopper oxidase YC6258_RS24440 PF00145 C-5 cytosine-specific DNA methylase YC6258_RS24455 PF03852 DNA mismatch endonuclease Vsr YC6258_RS24460 PF00501 AMP-binding enzyme YC6258_RS24460 PF00550 Phosphopantetheine attachment site YC6258_RS24460 PF13193 AMP-binding enzyme C-terminal domain YC6258_RS24460 PF00668 Condensation domain YC6258_RS24465 PF00550 Phosphopantetheine attachment site YC6258_RS24465 PF08242 Methyltransferase domain YC6258_RS24465 PF02801 Beta-ketoacyl synthase, C-terminal domain YC6258_RS24465 PF00109 Beta-ketoacyl synthase, N-terminal domain YC6258_RS24465 PF14765 Polyketide synthase dehydratase YC6258_RS24465 PF16197 Ketoacyl-synthetase C-terminal extension YC6258_RS24465 PF08659 KR domain YC6258_RS24475 PF03060 Nitronate monooxygenase YC6258_RS24475 PF00698 Acyl transferase domain YC6258_RS24490 PF13302 Acetyltransferase (GNAT) domain YC6258_RS24500 PF12833 Helix-turn-helix domain YC6258_RS24500 PF12852 Cupin YC6258_RS24555 PF01336 OB-fold nucleic acid binding domain YC6258_RS24555 PF00929 Exonuclease YC6258_RS24555 PF11490 DNA polymerase III polC-type N-terminus II YC6258_RS24555 PF07733 Bacterial DNA polymerase III alpha NTPase domain YC6258_RS24555 PF17657 Bacterial DNA polymerase III alpha subunit finger domain YC6258_RS24555 PF14579 Helix-hairpin-helix motif YC6258_RS24555 PF02811 PHP domain YC6258_RS24725 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath YC6258_RS24760 PF05173 Dihydrodipicolinate reductase, C-terminus YC6258_RS24760 PF01113 Dihydrodipicolinate reductase, N-terminus YC6258_RS24770 PF00391 PEP-utilising enzyme, mobile domain YC6258_RS24770 PF02896 PEP-utilising enzyme, TIM barrel domain YC6258_RS24770 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain YC6258_RS24795 PF00072 Response regulator receiver domain YC6258_RS24795 PF00158 Sigma-54 interaction domain YC6258_RS24805 PF00970 Oxidoreductase FAD-binding domain YC6258_RS24805 PF00042 Globin YC6258_RS24805 PF00175 Oxidoreductase NAD-binding domain YC6258_RS24810 PF00005 ABC transporter YC6258_RS24815 PF01032 FecCD transport family YC6258_RS24820 PF01032 FecCD transport family YC6258_RS24825 PF01497 Periplasmic binding protein YC6258_RS24830 PF01497 Periplasmic binding protein YC6258_RS24835 PF03747 ADP-ribosylglycohydrolase YC6258_RS24840 PF07357 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) YC6258_RS24850 PF03562 MltA specific insert domain YC6258_RS24850 PF06725 3D domain YC6258_RS24860 PF03422 Carbohydrate binding module (family 6) YC6258_RS24860 PF00404 Dockerin type I domain YC6258_RS24860 PF00756 Putative esterase YC6258_RS24860 PF00331 Glycosyl hydrolase family 10 YC6258_RS24865 PF08379 Bacterial transglutaminase-like N-terminal region YC6258_RS24865 PF01841 Transglutaminase-like superfamily YC6258_RS24870 PF14403 Circularly permuted ATP-grasp type 2 YC6258_RS24870 PF04168 A predicted alpha-helical domain with a conserved ER motif. YC6258_RS24885 PF14403 Circularly permuted ATP-grasp type 2 YC6258_RS24890 PF00155 Aminotransferase class I and II YC6258_RS24895 PF01196 Ribosomal protein L17 YC6258_RS24900 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain YC6258_RS24900 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain YC6258_RS24900 PF01000 RNA polymerase Rpb3/RpoA insert domain YC6258_RS24905 PF00163 Ribosomal protein S4/S9 N-terminal domain YC6258_RS24905 PF01479 S4 domain YC6258_RS24910 PF00411 Ribosomal protein S11 YC6258_RS24915 PF00416 Ribosomal protein S13/S18 YC6258_RS24920 PF00344 SecY translocase YC6258_RS24925 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A YC6258_RS24930 PF00327 Ribosomal protein L30p/L7e YC6258_RS24935 PF00333 Ribosomal protein S5, N-terminal domain YC6258_RS24935 PF03719 Ribosomal protein S5, C-terminal domain YC6258_RS24940 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast YC6258_RS24945 PF00347 Ribosomal protein L6 YC6258_RS24950 PF00410 Ribosomal protein S8 YC6258_RS24955 PF00253 Ribosomal protein S14p/S29e YC6258_RS24960 PF00673 ribosomal L5P family C-terminus YC6258_RS24960 PF00281 Ribosomal protein L5 YC6258_RS24965 PF00467 KOW motif YC6258_RS24965 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 YC6258_RS24970 PF00238 Ribosomal protein L14p/L23e YC6258_RS24975 PF00366 Ribosomal protein S17 YC6258_RS24980 PF00831 Ribosomal L29 protein YC6258_RS24985 PF00252 Ribosomal protein L16p/L10e YC6258_RS24990 PF07650 KH domain YC6258_RS24990 PF00189 Ribosomal protein S3, C-terminal domain YC6258_RS24995 PF00237 Ribosomal protein L22p/L17e YC6258_RS25000 PF00203 Ribosomal protein S19 YC6258_RS25005 PF00181 Ribosomal Proteins L2, RNA binding domain YC6258_RS25005 PF03947 Ribosomal Proteins L2, C-terminal domain YC6258_RS25010 PF00276 Ribosomal protein L23 YC6258_RS25015 PF00573 Ribosomal protein L4/L1 family YC6258_RS25020 PF00297 Ribosomal protein L3 YC6258_RS25025 PF00338 Ribosomal protein S10p/S20e YC6258_RS25035 PF00679 Elongation factor G C-terminus YC6258_RS25035 PF03144 Elongation factor Tu domain 2 YC6258_RS25035 PF00009 Elongation factor Tu GTP binding domain YC6258_RS25035 PF14492 Elongation Factor G, domain II YC6258_RS25035 PF03764 Elongation factor G, domain IV YC6258_RS25040 PF00177 Ribosomal protein S7p/S5e YC6258_RS25045 PF00164 Ribosomal protein S12/S23 YC6258_RS25050 PF04998 RNA polymerase Rpb1, domain 5 YC6258_RS25050 PF05000 RNA polymerase Rpb1, domain 4 YC6258_RS25050 PF04983 RNA polymerase Rpb1, domain 3 YC6258_RS25050 PF04997 RNA polymerase Rpb1, domain 1 YC6258_RS25050 PF00623 RNA polymerase Rpb1, domain 2 YC6258_RS25055 PF00562 RNA polymerase Rpb2, domain 6 YC6258_RS25055 PF04560 RNA polymerase Rpb2, domain 7 YC6258_RS25055 PF10385 RNA polymerase beta subunit external 1 domain YC6258_RS25055 PF04565 RNA polymerase Rpb2, domain 3 YC6258_RS25055 PF04563 RNA polymerase beta subunit YC6258_RS25055 PF04561 RNA polymerase Rpb2, domain 2 YC6258_RS25060 PF00542 Ribosomal protein L7/L12 C-terminal domain YC6258_RS25060 PF16320 Ribosomal protein L7/L12 dimerisation domain YC6258_RS25065 PF00466 Ribosomal protein L10 YC6258_RS25070 PF00687 Ribosomal protein L1p/L10e family YC6258_RS25075 PF00298 Ribosomal protein L11, RNA binding domain YC6258_RS25075 PF03946 Ribosomal protein L11, N-terminal domain YC6258_RS25080 PF00467 KOW motif YC6258_RS25080 PF02357 Transcription termination factor nusG YC6258_RS25085 PF00584 SecE/Sec61-gamma subunits of protein translocation complex YC6258_RS25095 PF00009 Elongation factor Tu GTP binding domain YC6258_RS25095 PF03144 Elongation factor Tu domain 2 YC6258_RS25095 PF03143 Elongation factor Tu C-terminal domain YC6258_RS25120 PF03309 Type III pantothenate kinase YC6258_RS25125 PF08279 HTH domain YC6258_RS25125 PF03099 Biotin/lipoate A/B protein ligase family YC6258_RS25125 PF02237 Biotin protein ligase C terminal domain YC6258_RS25145 PF01479 S4 domain YC6258_RS25145 PF00579 tRNA synthetases class I (W and Y) YC6258_RS25150 PF01551 Peptidase family M23 YC6258_RS25150 PF04225 Opacity-associated protein A LysM-like domain YC6258_RS25160 PF01521 Iron-sulphur cluster biosynthesis YC6258_RS25175 PF00654 Voltage gated chloride channel YC6258_RS25180 PF03653 Uncharacterised protein family (UPF0093) YC6258_RS25185 PF00381 PTS HPr component phosphorylation site YC6258_RS25185 PF00391 PEP-utilising enzyme, mobile domain YC6258_RS25185 PF02896 PEP-utilising enzyme, TIM barrel domain YC6258_RS25185 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YC6258_RS25185 PF05524 PEP-utilising enzyme, N-terminal YC6258_RS25190 PF01232 Mannitol dehydrogenase Rossmann domain YC6258_RS25190 PF08125 Mannitol dehydrogenase C-terminal domain YC6258_RS25195 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit YC6258_RS25195 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YC6258_RS25195 PF02378 Phosphotransferase system, EIIC YC6258_RS25205 PF08220 DeoR-like helix-turn-helix domain YC6258_RS25205 PF00455 DeoR C terminal sensor domain YC6258_RS25210 PF06903 VirK protein YC6258_RS25215 PF00202 Aminotransferase class-III YC6258_RS25225 PF01713 Smr domain YC6258_RS25230 PF12833 Helix-turn-helix domain YC6258_RS25230 PF02311 AraC-like ligand binding domain YC6258_RS25235 PF04996 Succinylarginine dihydrolase YC6258_RS25240 PF00171 Aldehyde dehydrogenase family YC6258_RS25245 PF04958 Arginine N-succinyltransferase beta subunit YC6258_RS25250 PF04958 Arginine N-succinyltransferase beta subunit YC6258_RS25255 PF00202 Aminotransferase class-III YC6258_RS25265 PF00685 Sulfotransferase domain YC6258_RS25270 PF12833 Helix-turn-helix domain YC6258_RS25280 PF00708 Acylphosphatase YC6258_RS25290 PF00975 Thioesterase domain YC6258_RS25290 PF00501 AMP-binding enzyme YC6258_RS25290 PF13193 AMP-binding enzyme C-terminal domain YC6258_RS25290 PF00668 Condensation domain YC6258_RS25290 PF00550 Phosphopantetheine attachment site YC6258_RS25295 PF00005 ABC transporter YC6258_RS25300 PF07992 Pyridine nucleotide-disulphide oxidoreductase YC6258_RS25300 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster YC6258_RS25305 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase YC6258_RS25305 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YC6258_RS25305 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg YC6258_RS25305 PF10371 Domain of unknown function YC6258_RS25305 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II YC6258_RS25310 PF00657 GDSL-like Lipase/Acylhydrolase YC6258_RS25325 PF00390 Malic enzyme, N-terminal domain YC6258_RS25325 PF03949 Malic enzyme, NAD binding domain YC6258_RS25340 PF04389 Peptidase family M28 YC6258_RS25340 PF01483 Proprotein convertase P-domain YC6258_RS25350 PF03150 Di-haem cytochrome c peroxidase YC6258_RS25375 PF00582 Universal stress protein family YC6258_RS25380 PF03401 Tripartite tricarboxylate transporter family receptor YC6258_RS25385 PF01266 FAD dependent oxidoreductase YC6258_RS25395 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase YC6258_RS25400 PF01613 Flavin reductase like domain YC6258_RS25405 PF08028 Acyl-CoA dehydrogenase, C-terminal domain YC6258_RS25420 PF03328 HpcH/HpaI aldolase/citrate lyase family YC6258_RS25425 PF01557 Fumarylacetoacetate (FAA) hydrolase family YC6258_RS25435 PF00171 Aldehyde dehydrogenase family YC6258_RS25440 PF01557 Fumarylacetoacetate (FAA) hydrolase family YC6258_RS25450 PF00171 Aldehyde dehydrogenase family YC6258_RS25460 PF00196 Bacterial regulatory proteins, luxR family YC6258_RS25460 PF00072 Response regulator receiver domain YC6258_RS25465 PF17862 AAA+ lid domain YC6258_RS25465 PF00004 ATPase family associated with various cellular activities (AAA) YC6258_RS25465 PF01434 Peptidase family M41 YC6258_RS25490 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YC6258_RS25490 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal YC6258_RS25505 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family YC6258_RS25515 PF03466 LysR substrate binding domain YC6258_RS25515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS25525 PF00356 Bacterial regulatory proteins, lacI family YC6258_RS25530 PF01341 Glycosyl hydrolases family 6 YC6258_RS25530 PF00553 Cellulose binding domain YC6258_RS25530 PF00041 Fibronectin type III domain YC6258_RS25540 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) YC6258_RS25545 PF00271 Helicase conserved C-terminal domain YC6258_RS25545 PF00270 DEAD/DEAH box helicase YC6258_RS25550 PF00749 tRNA synthetases class I (E and Q), catalytic domain YC6258_RS25555 PF02645 Uncharacterised protein, DegV family COG1307 YC6258_RS25560 PF02653 Branched-chain amino acid transport system / permease component YC6258_RS25565 PF02653 Branched-chain amino acid transport system / permease component YC6258_RS25570 PF00005 ABC transporter YC6258_RS25575 PF02608 ABC transporter substrate-binding protein PnrA-like YC6258_RS25585 PF00149 Calcineurin-like phosphoesterase YC6258_RS25585 PF02872 5'-nucleotidase, C-terminal domain YC6258_RS25590 PF00186 Dihydrofolate reductase YC6258_RS25600 PF02503 Polyphosphate kinase middle domain YC6258_RS25600 PF17941 Polyphosphate kinase C-terminal domain 1 YC6258_RS25600 PF13089 Polyphosphate kinase N-terminal domain YC6258_RS25600 PF13090 Polyphosphate kinase C-terminal domain 2 YC6258_RS25605 PF14521 Lysine-specific metallo-endopeptidase YC6258_RS25615 PF02541 Ppx/GppA phosphatase family YC6258_RS25620 PF02580 D-Tyr-tRNA(Tyr) deacylase YC6258_RS25625 PF00561 alpha/beta hydrolase fold YC6258_RS25645 PF00072 Response regulator receiver domain YC6258_RS25645 PF00196 Bacterial regulatory proteins, luxR family YC6258_RS25650 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS25650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS25650 PF00672 HAMP domain YC6258_RS25655 PF01544 CorA-like Mg2+ transporter protein YC6258_RS25660 PF00009 Elongation factor Tu GTP binding domain YC6258_RS25660 PF00679 Elongation factor G C-terminus YC6258_RS25660 PF03144 Elongation factor Tu domain 2 YC6258_RS25665 PF02896 PEP-utilising enzyme, TIM barrel domain YC6258_RS25665 PF00391 PEP-utilising enzyme, mobile domain YC6258_RS25665 PF05524 PEP-utilising enzyme, N-terminal YC6258_RS25665 PF01590 GAF domain YC6258_RS25670 PF00293 NUDIX domain YC6258_RS25685 PF08668 HDOD domain YC6258_RS25685 PF00563 EAL domain YC6258_RS25690 PF00459 Inositol monophosphatase family YC6258_RS25695 PF13419 Haloacid dehalogenase-like hydrolase YC6258_RS25700 PF01479 S4 domain YC6258_RS25705 PF01430 Hsp33 protein YC6258_RS25710 PF17674 HHH domain YC6258_RS25710 PF00575 S1 RNA binding domain YC6258_RS25710 PF09371 Tex-like protein N-terminal domain YC6258_RS25710 PF16921 Tex protein YqgF-like domain YC6258_RS25715 PF04262 Glutamate-cysteine ligase YC6258_RS25730 PF02600 Disulfide bond formation protein DsbB YC6258_RS25735 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ YC6258_RS25760 PF00005 ABC transporter YC6258_RS25760 PF12848 ABC transporter YC6258_RS25765 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain YC6258_RS25765 PF17203 Single cache domain 3 YC6258_RS25765 PF00989 PAS fold YC6258_RS25765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS25770 PF00072 Response regulator receiver domain YC6258_RS25770 PF04703 FaeA-like protein YC6258_RS25775 PF01202 Shikimate kinase YC6258_RS25790 PF01970 Tripartite tricarboxylate transporter TctA family YC6258_RS25880 PF08240 Alcohol dehydrogenase GroES-like domain YC6258_RS25880 PF00107 Zinc-binding dehydrogenase YC6258_RS25895 PF01965 DJ-1/PfpI family YC6258_RS25900 PF05368 NmrA-like family YC6258_RS25905 PF01638 HxlR-like helix-turn-helix YC6258_RS25910 PF03781 Sulfatase-modifying factor enzyme 1 YC6258_RS25985 PF17864 RuvB AAA lid domain YC6258_RS25985 PF05491 RuvB C-terminal winged helix domain YC6258_RS25985 PF05496 Holliday junction DNA helicase RuvB P-loop domain YC6258_RS26000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS26000 PF02743 Cache domain YC6258_RS26000 PF00672 HAMP domain YC6258_RS26005 PF01964 Radical SAM ThiC family YC6258_RS26005 PF13667 ThiC-associated domain YC6258_RS26010 PF01266 FAD dependent oxidoreductase YC6258_RS26020 PF05690 Thiazole biosynthesis protein ThiG YC6258_RS26025 PF02581 Thiamine monophosphate synthase YC6258_RS26030 PF12852 Cupin YC6258_RS26030 PF12833 Helix-turn-helix domain YC6258_RS26115 PF02954 Bacterial regulatory protein, Fis family YC6258_RS26115 PF00072 Response regulator receiver domain YC6258_RS26115 PF00158 Sigma-54 interaction domain YC6258_RS26130 PF14600 Cellulose-binding domain YC6258_RS26130 PF00150 Cellulase (glycosyl hydrolase family 5) YC6258_RS26145 PF00437 Type II/IV secretion system protein YC6258_RS26145 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain YC6258_RS26155 PF01928 CYTH domain YC6258_RS26160 PF07730 Histidine kinase YC6258_RS26160 PF00672 HAMP domain YC6258_RS26160 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term YC6258_RS26160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS26165 PF00072 Response regulator receiver domain YC6258_RS26165 PF00196 Bacterial regulatory proteins, luxR family YC6258_RS26170 PF03453 MoeA N-terminal region (domain I and II) YC6258_RS26170 PF00994 Probable molybdopterin binding domain YC6258_RS26170 PF03454 MoeA C-terminal region (domain IV) YC6258_RS26175 PF00365 Phosphofructokinase YC6258_RS26180 PF04463 Protein of unknown function (DUF523) YC6258_RS26255 PF00196 Bacterial regulatory proteins, luxR family YC6258_RS26255 PF00072 Response regulator receiver domain YC6258_RS26260 PF07730 Histidine kinase YC6258_RS26265 PF00873 AcrB/AcrD/AcrF family YC6258_RS26275 PF00005 ABC transporter YC6258_RS26280 PF12704 MacB-like periplasmic core domain YC6258_RS26280 PF02687 FtsX-like permease family YC6258_RS26280 PF00005 ABC transporter YC6258_RS26285 PF00005 ABC transporter YC6258_RS26285 PF02687 FtsX-like permease family YC6258_RS26285 PF12704 MacB-like periplasmic core domain YC6258_RS26295 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YC6258_RS26310 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS26315 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS26320 PF08402 TOBE domain YC6258_RS26320 PF00005 ABC transporter YC6258_RS26325 PF13416 Bacterial extracellular solute-binding protein YC6258_RS26330 PF00202 Aminotransferase class-III YC6258_RS26335 PF00120 Glutamine synthetase, catalytic domain YC6258_RS26340 PF00120 Glutamine synthetase, catalytic domain YC6258_RS26345 PF00909 Ammonium Transporter Family YC6258_RS26365 PF01266 FAD dependent oxidoreductase YC6258_RS26370 PF00171 Aldehyde dehydrogenase family YC6258_RS26380 PF00034 Cytochrome c YC6258_RS26380 PF03150 Di-haem cytochrome c peroxidase YC6258_RS26385 PF00034 Cytochrome c YC6258_RS26385 PF03150 Di-haem cytochrome c peroxidase YC6258_RS26390 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YC6258_RS26395 PF00892 EamA-like transporter family YC6258_RS26400 PF01047 MarR family YC6258_RS26405 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS26405 PF00563 EAL domain YC6258_RS26405 PF03707 Bacterial signalling protein N terminal repeat YC6258_RS26415 PF00072 Response regulator receiver domain YC6258_RS26420 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS26420 PF08446 PAS fold YC6258_RS26420 PF01590 GAF domain YC6258_RS26420 PF00360 Phytochrome region YC6258_RS26420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS26425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS26425 PF00672 HAMP domain YC6258_RS26425 PF17200 Single Cache domain 2 YC6258_RS26430 PF00155 Aminotransferase class I and II YC6258_RS26435 PF17200 Single Cache domain 2 YC6258_RS26435 PF00672 HAMP domain YC6258_RS26435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS26445 PF01654 Cytochrome bd terminal oxidase subunit I YC6258_RS26450 PF02322 Cytochrome bd terminal oxidase subunit II YC6258_RS26460 PF00005 ABC transporter YC6258_RS26460 PF00664 ABC transporter transmembrane region YC6258_RS26465 PF00664 ABC transporter transmembrane region YC6258_RS26465 PF00005 ABC transporter YC6258_RS26470 PF00209 Sodium:neurotransmitter symporter family YC6258_RS26475 PF04717 Type VI secretion system, phage-baseplate injector YC6258_RS26490 PF03781 Sulfatase-modifying factor enzyme 1 YC6258_RS26610 PF00583 Acetyltransferase (GNAT) family YC6258_RS26615 PF00293 NUDIX domain YC6258_RS26620 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain YC6258_RS26620 PF00056 lactate/malate dehydrogenase, NAD binding domain YC6258_RS26625 PF01177 Asp/Glu/Hydantoin racemase YC6258_RS26630 PF00583 Acetyltransferase (GNAT) family YC6258_RS26705 PF01374 Glycosyl hydrolase family 46 YC6258_RS26715 PF00356 Bacterial regulatory proteins, lacI family YC6258_RS26725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YC6258_RS26725 PF00005 ABC transporter YC6258_RS26730 PF00005 ABC transporter YC6258_RS26730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YC6258_RS26740 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS26740 PF12911 N-terminal TM domain of oligopeptide transport permease C YC6258_RS26745 PF00528 Binding-protein-dependent transport system inner membrane component YC6258_RS26750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YC6258_RS26755 PF07470 Glycosyl Hydrolase Family 88 YC6258_RS26785 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component YC6258_RS26825 PF04616 Glycosyl hydrolases family 43 YC6258_RS26825 PF03422 Carbohydrate binding module (family 6) YC6258_RS26830 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS26840 PF00072 Response regulator receiver domain YC6258_RS26845 PF03707 Bacterial signalling protein N terminal repeat YC6258_RS26845 PF00563 EAL domain YC6258_RS26845 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS26850 PF05840 Bacteriophage replication gene A protein (GPA) YC6258_RS26855 PF00140 Sigma-70 factor, region 1.2 YC6258_RS26855 PF03979 Sigma-70 factor, region 1.1 YC6258_RS26855 PF04542 Sigma-70 region 2 YC6258_RS26855 PF04545 Sigma-70, region 4 YC6258_RS26855 PF04539 Sigma-70 region 3 YC6258_RS26890 PF07963 Prokaryotic N-terminal methylation motif YC6258_RS26895 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS26895 PF08448 PAS fold YC6258_RS26910 PF03707 Bacterial signalling protein N terminal repeat YC6258_RS26910 PF00563 EAL domain YC6258_RS26910 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS26915 PF00072 Response regulator receiver domain YC6258_RS26915 PF09456 RcsC Alpha-Beta-Loop (ABL) YC6258_RS26915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS26915 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS26935 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS26935 PF00563 EAL domain YC6258_RS26935 PF03707 Bacterial signalling protein N terminal repeat YC6258_RS26940 PF03009 Glycerophosphoryl diester phosphodiesterase family YC6258_RS26960 PF00668 Condensation domain YC6258_RS26960 PF00501 AMP-binding enzyme YC6258_RS26960 PF00550 Phosphopantetheine attachment site YC6258_RS26960 PF00975 Thioesterase domain YC6258_RS26960 PF13193 AMP-binding enzyme C-terminal domain YC6258_RS26965 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS26965 PF00563 EAL domain YC6258_RS26965 PF08448 PAS fold YC6258_RS26965 PF08447 PAS fold YC6258_RS26990 PF01292 Prokaryotic cytochrome b561 YC6258_RS26995 PF01590 GAF domain YC6258_RS26995 PF00563 EAL domain YC6258_RS26995 PF00360 Phytochrome region YC6258_RS26995 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS27005 PF00156 Phosphoribosyl transferase domain YC6258_RS27010 PF03466 LysR substrate binding domain YC6258_RS27010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YC6258_RS27015 PF11741 AMIN domain YC6258_RS27015 PF00263 Bacterial type II and III secretion system protein YC6258_RS27015 PF03958 Bacterial type II/III secretion system short domain YC6258_RS27015 PF07660 Secretin and TonB N terminus short domain YC6258_RS27050 PF00072 Response regulator receiver domain YC6258_RS27050 PF08448 PAS fold YC6258_RS27050 PF13188 PAS domain YC6258_RS27050 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS27050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS27055 PF00563 EAL domain YC6258_RS27055 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS27055 PF03707 Bacterial signalling protein N terminal repeat YC6258_RS27060 PF14504 CAP-associated N-terminal YC6258_RS27060 PF00188 Cysteine-rich secretory protein family YC6258_RS27070 PF03527 RHS protein YC6258_RS27085 PF00691 OmpA family YC6258_RS27100 PF00691 OmpA family YC6258_RS27100 PF05736 OprF membrane domain YC6258_RS27115 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS27115 PF08448 PAS fold YC6258_RS27120 PF17151 Periplasmic sensor domain YC6258_RS27120 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS27155 PF00563 EAL domain YC6258_RS27155 PF03707 Bacterial signalling protein N terminal repeat YC6258_RS27155 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS27190 PF03707 Bacterial signalling protein N terminal repeat YC6258_RS27190 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS27190 PF00563 EAL domain YC6258_RS27195 PF01738 Dienelactone hydrolase family YC6258_RS27205 PF08447 PAS fold YC6258_RS27205 PF08448 PAS fold YC6258_RS27205 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS27205 PF00563 EAL domain YC6258_RS27210 PF00550 Phosphopantetheine attachment site YC6258_RS27210 PF00668 Condensation domain YC6258_RS27210 PF13193 AMP-binding enzyme C-terminal domain YC6258_RS27210 PF00501 AMP-binding enzyme YC6258_RS27250 PF00004 ATPase family associated with various cellular activities (AAA) YC6258_RS27250 PF01434 Peptidase family M41 YC6258_RS27250 PF17862 AAA+ lid domain YC6258_RS27250 PF06480 FtsH Extracellular YC6258_RS27260 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS27260 PF16527 Two-component sensor protein CpxA, periplasmic domain YC6258_RS27260 PF00672 HAMP domain YC6258_RS27260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS27265 PF00563 EAL domain YC6258_RS27265 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS27265 PF03707 Bacterial signalling protein N terminal repeat YC6258_RS27270 PF00313 'Cold-shock' DNA-binding domain YC6258_RS27280 PF03527 RHS protein YC6258_RS27285 PF02013 Cellulose or protein binding domain YC6258_RS27285 PF00553 Cellulose binding domain YC6258_RS27285 PF00150 Cellulase (glycosyl hydrolase family 5) YC6258_RS27305 PF00672 HAMP domain YC6258_RS27305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS27310 PF02013 Cellulose or protein binding domain YC6258_RS27310 PF02927 Cellulase N-terminal ig-like domain YC6258_RS27310 PF00553 Cellulose binding domain YC6258_RS27310 PF00759 Glycosyl hydrolase family 9 YC6258_RS27310 PF00801 PKD domain YC6258_RS27315 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) YC6258_RS27315 PF00072 Response regulator receiver domain YC6258_RS27315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS27315 PF01627 Hpt domain YC6258_RS27315 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS27315 PF00672 HAMP domain YC6258_RS27355 PF09115 DNA polymerase III, delta subunit, C terminal YC6258_RS27370 PF00753 Metallo-beta-lactamase superfamily YC6258_RS27370 PF16123 Hydroxyacylglutathione hydrolase C-terminus YC6258_RS27395 PF02719 Polysaccharide biosynthesis protein YC6258_RS27405 PF00550 Phosphopantetheine attachment site YC6258_RS27405 PF00668 Condensation domain YC6258_RS27405 PF00975 Thioesterase domain YC6258_RS27405 PF13193 AMP-binding enzyme C-terminal domain YC6258_RS27405 PF00501 AMP-binding enzyme YC6258_RS27425 PF00563 EAL domain YC6258_RS27425 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS27425 PF03707 Bacterial signalling protein N terminal repeat YC6258_RS27435 PF01648 4'-phosphopantetheinyl transferase superfamily YC6258_RS27435 PF17837 4'-phosphopantetheinyl transferase N-terminal domain YC6258_RS27445 PF00109 Beta-ketoacyl synthase, N-terminal domain YC6258_RS27445 PF14765 Polyketide synthase dehydratase YC6258_RS27445 PF16197 Ketoacyl-synthetase C-terminal extension YC6258_RS27445 PF00698 Acyl transferase domain YC6258_RS27445 PF00550 Phosphopantetheine attachment site YC6258_RS27445 PF08659 KR domain YC6258_RS27445 PF02801 Beta-ketoacyl synthase, C-terminal domain YC6258_RS27450 PF02801 Beta-ketoacyl synthase, C-terminal domain YC6258_RS27450 PF00109 Beta-ketoacyl synthase, N-terminal domain YC6258_RS27450 PF16197 Ketoacyl-synthetase C-terminal extension YC6258_RS27450 PF14765 Polyketide synthase dehydratase YC6258_RS27450 PF00668 Condensation domain YC6258_RS27450 PF13193 AMP-binding enzyme C-terminal domain YC6258_RS27450 PF00501 AMP-binding enzyme YC6258_RS27450 PF00550 Phosphopantetheine attachment site YC6258_RS27450 PF08659 KR domain YC6258_RS27460 PF14765 Polyketide synthase dehydratase YC6258_RS27460 PF00550 Phosphopantetheine attachment site YC6258_RS27460 PF08242 Methyltransferase domain YC6258_RS27460 PF08659 KR domain YC6258_RS27460 PF02801 Beta-ketoacyl synthase, C-terminal domain YC6258_RS27460 PF00109 Beta-ketoacyl synthase, N-terminal domain YC6258_RS27460 PF16197 Ketoacyl-synthetase C-terminal extension YC6258_RS27480 PF05840 Bacteriophage replication gene A protein (GPA) YC6258_RS27490 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS27490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS27490 PF07689 KaiB domain YC6258_RS27495 PF17151 Periplasmic sensor domain YC6258_RS27495 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS27500 PF01029 NusB family YC6258_RS27500 PF01189 16S rRNA methyltransferase RsmB/F YC6258_RS27505 PF00135 Carboxylesterase family YC6258_RS27510 PF16841 Ca-dependent carbohydrate-binding module xylan-binding YC6258_RS27510 PF00457 Glycosyl hydrolases family 11 YC6258_RS27520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS27520 PF00672 HAMP domain YC6258_RS27530 PF16369 C-terminal lipocalin-like domain YC6258_RS27530 PF04616 Glycosyl hydrolases family 43 YC6258_RS27535 PF02589 LUD domain YC6258_RS27540 PF00672 HAMP domain YC6258_RS27540 PF12729 Four helix bundle sensory module for signal transduction YC6258_RS27540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS27560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YC6258_RS27560 PF00672 HAMP domain YC6258_RS27560 PF02203 Tar ligand binding domain homologue YC6258_RS27565 PF13847 Methyltransferase domain YC6258_RS27570 PF00669 Bacterial flagellin N-terminal helical region YC6258_RS27570 PF00669 Bacterial flagellin N-terminal helical region YC6258_RS27570 PF00700 Bacterial flagellin C-terminal helical region YC6258_RS27570 PF00700 Bacterial flagellin C-terminal helical region YC6258_RS27575 PF08359 YsiA-like protein, C-terminal region YC6258_RS27575 PF00440 Bacterial regulatory proteins, tetR family YC6258_RS27580 PF04079 Segregation and condensation complex subunit ScpB YC6258_RS27590 PF00155 Aminotransferase class I and II YC6258_RS27595 PF09308 LuxQ, periplasmic YC6258_RS27595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS27595 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS27595 PF00072 Response regulator receiver domain YC6258_RS27600 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS27600 PF08448 PAS fold YC6258_RS27600 PF13188 PAS domain YC6258_RS27600 PF00072 Response regulator receiver domain YC6258_RS27600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS27645 PF00563 EAL domain YC6258_RS27645 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS27645 PF03707 Bacterial signalling protein N terminal repeat YC6258_RS27645 PF13188 PAS domain YC6258_RS27655 PF14765 Polyketide synthase dehydratase YC6258_RS27655 PF08659 KR domain YC6258_RS27655 PF02801 Beta-ketoacyl synthase, C-terminal domain YC6258_RS27655 PF00109 Beta-ketoacyl synthase, N-terminal domain YC6258_RS27655 PF00550 Phosphopantetheine attachment site YC6258_RS27655 PF16197 Ketoacyl-synthetase C-terminal extension YC6258_RS27660 PF01400 Astacin (Peptidase family M12A) YC6258_RS27660 PF14200 Ricin-type beta-trefoil lectin domain-like YC6258_RS27680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS27680 PF00672 HAMP domain YC6258_RS27680 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS27690 PF13439 Glycosyltransferase Family 4 YC6258_RS27690 PF00534 Glycosyl transferases group 1 YC6258_RS27700 PF00691 OmpA family YC6258_RS27700 PF13677 Membrane MotB of proton-channel complex MotA/MotB YC6258_RS27710 PF00114 Pilin (bacterial filament) YC6258_RS27710 PF07963 Prokaryotic N-terminal methylation motif YC6258_RS27740 PF13229 Right handed beta helix region YC6258_RS27755 PF00563 EAL domain YC6258_RS27755 PF00990 Diguanylate cyclase, GGDEF domain YC6258_RS27755 PF03707 Bacterial signalling protein N terminal repeat YC6258_RS27760 PF01471 Putative peptidoglycan binding domain YC6258_RS27760 PF03734 L,D-transpeptidase catalytic domain YC6258_RS27765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YC6258_RS27765 PF00512 His Kinase A (phospho-acceptor) domain YC6258_RS27765 PF09456 RcsC Alpha-Beta-Loop (ABL) YC6258_RS27765 PF00072 Response regulator receiver domain YC6258_RS27780 PF00355 Rieske [2Fe-2S] domain