AY555_RS02790 667f68de5fcec9e140a736141f269e89 118 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 9 105 2.1E-8 T 14-09-2016 IPR008767 Bacteriophage SPP1, head-tail adaptor AY555_RS02790 667f68de5fcec9e140a736141f269e89 118 Pfam PF05521 Phage head-tail joining protein 10 99 5.4E-13 T 14-09-2016 IPR008767 Bacteriophage SPP1, head-tail adaptor AY555_RS09275 08d566520cec5f6ae089069b69e7a20b 708 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 359 379 - T 14-09-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 AY555_RS09275 08d566520cec5f6ae089069b69e7a20b 708 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 23 624 4.5E-259 T 14-09-2016 IPR022946 Uncharacterised protein family UPF0313 AY555_RS09275 08d566520cec5f6ae089069b69e7a20b 708 Gene3D G3DSA:3.80.30.20 353 593 3.0E-49 T 14-09-2016 IPR023404 Radical SAM, alpha/beta horseshoe AY555_RS09275 08d566520cec5f6ae089069b69e7a20b 708 Pfam PF11842 Domain of unknown function (DUF3362) 573 687 1.7E-45 T 14-09-2016 IPR024560 Uncharacterised protein family UPF0313, C-terminal AY555_RS09275 08d566520cec5f6ae089069b69e7a20b 708 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 22 677 48.109 T 14-09-2016 IPR022946 Uncharacterised protein family UPF0313 AY555_RS09275 08d566520cec5f6ae089069b69e7a20b 708 SMART SM00729 355 610 6.3E-10 T 14-09-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AY555_RS09275 08d566520cec5f6ae089069b69e7a20b 708 PANTHER PTHR32331:SF3 2 705 0.0 T 14-09-2016 AY555_RS09275 08d566520cec5f6ae089069b69e7a20b 708 SUPERFAMILY SSF102114 335 419 1.83E-13 T 14-09-2016 AY555_RS09275 08d566520cec5f6ae089069b69e7a20b 708 SUPERFAMILY SSF102114 449 596 1.83E-13 T 14-09-2016 AY555_RS09275 08d566520cec5f6ae089069b69e7a20b 708 Pfam PF08497 Radical SAM N-terminal 23 358 1.1E-143 T 14-09-2016 IPR013704 Uncharacterised protein family UPF0313, N-terminal AY555_RS09275 08d566520cec5f6ae089069b69e7a20b 708 Pfam PF04055 Radical SAM superfamily 359 564 6.1E-19 T 14-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AY555_RS09275 08d566520cec5f6ae089069b69e7a20b 708 PANTHER PTHR32331 2 705 0.0 T 14-09-2016 AY555_RS06695 c45fbda0b54d6a93ec1c2a073970975c 341 Gene3D G3DSA:3.40.190.10 31 151 1.5E-26 T 14-09-2016 AY555_RS06695 c45fbda0b54d6a93ec1c2a073970975c 341 SUPERFAMILY SSF53850 26 256 1.45E-48 T 14-09-2016 AY555_RS06695 c45fbda0b54d6a93ec1c2a073970975c 341 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 254 5.2E-31 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AY555_RS06695 c45fbda0b54d6a93ec1c2a073970975c 341 SMART SM00062 35 265 2.0E-50 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AY555_RS06695 c45fbda0b54d6a93ec1c2a073970975c 341 PANTHER PTHR30085 1 310 4.3E-155 T 14-09-2016 AY555_RS06695 c45fbda0b54d6a93ec1c2a073970975c 341 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 58 71 - T 14-09-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AY555_RS06695 c45fbda0b54d6a93ec1c2a073970975c 341 PANTHER PTHR30085:SF5 1 310 4.3E-155 T 14-09-2016 AY555_RS06695 c45fbda0b54d6a93ec1c2a073970975c 341 Gene3D G3DSA:3.40.190.10 152 203 2.9E-6 T 14-09-2016 AY555_RS08480 2a62005e9d7933a6ce8de61de9895d46 264 PANTHER PTHR12553 2 258 4.3E-46 T 14-09-2016 AY555_RS08480 2a62005e9d7933a6ce8de61de9895d46 264 Pfam PF12706 Beta-lactamase superfamily domain 46 226 2.4E-31 T 14-09-2016 IPR001279 Metallo-beta-lactamase AY555_RS08480 2a62005e9d7933a6ce8de61de9895d46 264 SMART SM00849 34 203 0.0039 T 14-09-2016 IPR001279 Metallo-beta-lactamase AY555_RS08480 2a62005e9d7933a6ce8de61de9895d46 264 Gene3D G3DSA:3.60.15.10 2 259 1.7E-61 T 14-09-2016 IPR001279 Metallo-beta-lactamase AY555_RS08480 2a62005e9d7933a6ce8de61de9895d46 264 SUPERFAMILY SSF56281 2 255 1.86E-39 T 14-09-2016 IPR001279 Metallo-beta-lactamase AY555_RS08480 2a62005e9d7933a6ce8de61de9895d46 264 PANTHER PTHR12553:SF7 2 258 4.3E-46 T 14-09-2016 AY555_RS07460 eed64fc844d81aa1d663d1e4beecf5ed 266 PANTHER PTHR23407 67 254 1.2E-31 T 14-09-2016 AY555_RS07460 eed64fc844d81aa1d663d1e4beecf5ed 266 Gene3D G3DSA:3.40.50.10420 73 256 7.9E-40 T 14-09-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain AY555_RS07460 eed64fc844d81aa1d663d1e4beecf5ed 266 SUPERFAMILY SSF100950 73 257 2.23E-40 T 14-09-2016 AY555_RS07460 eed64fc844d81aa1d663d1e4beecf5ed 266 PANTHER PTHR23407:SF1 67 254 1.2E-31 T 14-09-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase AY555_RS07460 eed64fc844d81aa1d663d1e4beecf5ed 266 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 74 251 5.1E-24 T 14-09-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase AY555_RS07460 eed64fc844d81aa1d663d1e4beecf5ed 266 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 74 251 1.2E-34 T 14-09-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase AY555_RS06860 ef24cf3337408ced9d2fc69e69d17b08 350 Gene3D G3DSA:3.30.160.20 204 281 1.0E-35 T 14-09-2016 IPR014720 Double-stranded RNA-binding domain AY555_RS06860 ef24cf3337408ced9d2fc69e69d17b08 350 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 220 236 - T 14-09-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AY555_RS06860 ef24cf3337408ced9d2fc69e69d17b08 350 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 3 350 39.057 T 14-09-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AY555_RS06860 ef24cf3337408ced9d2fc69e69d17b08 350 SUPERFAMILY SSF75620 12 346 4.05E-127 T 14-09-2016 AY555_RS06860 ef24cf3337408ced9d2fc69e69d17b08 350 PANTHER PTHR11075:SF9 5 349 8.6E-170 T 14-09-2016 AY555_RS06860 ef24cf3337408ced9d2fc69e69d17b08 350 SMART SM00937 56 171 5.9E-56 T 14-09-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 AY555_RS06860 ef24cf3337408ced9d2fc69e69d17b08 350 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 5 349 4.1E-147 T 14-09-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AY555_RS06860 ef24cf3337408ced9d2fc69e69d17b08 350 Gene3D G3DSA:1.20.58.410 8 86 1.6E-7 T 14-09-2016 AY555_RS06860 ef24cf3337408ced9d2fc69e69d17b08 350 PANTHER PTHR11075 5 349 8.6E-170 T 14-09-2016 AY555_RS06860 ef24cf3337408ced9d2fc69e69d17b08 350 Pfam PF00472 RF-1 domain 205 313 9.6E-44 T 14-09-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AY555_RS06860 ef24cf3337408ced9d2fc69e69d17b08 350 Pfam PF03462 PCRF domain 13 196 1.0E-64 T 14-09-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 AY555_RS03205 580209982838d5abd45b3be7e0c8c171 644 Gene3D G3DSA:2.30.38.10 436 512 4.3E-9 T 14-09-2016 AY555_RS03205 580209982838d5abd45b3be7e0c8c171 644 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 1 642 54.615 T 14-09-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 AY555_RS03205 580209982838d5abd45b3be7e0c8c171 644 Gene3D G3DSA:3.40.50.980 79 263 4.2E-44 T 14-09-2016 AY555_RS03205 580209982838d5abd45b3be7e0c8c171 644 Gene3D G3DSA:3.40.50.980 264 421 6.3E-27 T 14-09-2016 AY555_RS03205 580209982838d5abd45b3be7e0c8c171 644 PANTHER PTHR24095 2 642 0.0 T 14-09-2016 AY555_RS03205 580209982838d5abd45b3be7e0c8c171 644 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 23 80 7.6E-20 T 14-09-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 AY555_RS03205 580209982838d5abd45b3be7e0c8c171 644 Gene3D G3DSA:3.30.300.30 515 632 1.0E-26 T 14-09-2016 AY555_RS03205 580209982838d5abd45b3be7e0c8c171 644 PANTHER PTHR24095:SF178 2 642 0.0 T 14-09-2016 AY555_RS03205 580209982838d5abd45b3be7e0c8c171 644 ProSitePatterns PS00455 Putative AMP-binding domain signature. 258 269 - T 14-09-2016 IPR020845 AMP-binding, conserved site AY555_RS03205 580209982838d5abd45b3be7e0c8c171 644 Pfam PF00501 AMP-binding enzyme 82 519 5.9E-93 T 14-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AY555_RS03205 580209982838d5abd45b3be7e0c8c171 644 SUPERFAMILY SSF56801 13 639 1.22E-186 T 14-09-2016 AY555_RS03205 580209982838d5abd45b3be7e0c8c171 644 Pfam PF13193 AMP-binding enzyme C-terminal domain 528 606 6.0E-24 T 14-09-2016 IPR025110 AMP-binding enzyme C-terminal domain AY555_RS03205 580209982838d5abd45b3be7e0c8c171 644 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 640 0.0 T 14-09-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 AY555_RS04000 1d9fcb10770600e3049a87884465ba38 165 Pfam PF02576 Putative ribosome maturation factor RimP 10 148 1.3E-36 T 14-09-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 AY555_RS04000 1d9fcb10770600e3049a87884465ba38 165 Gene3D G3DSA:2.30.30.180 88 149 2.6E-8 T 14-09-2016 IPR028998 Ribosome maturation factor RimP, C-terminal AY555_RS04000 1d9fcb10770600e3049a87884465ba38 165 PANTHER PTHR33867 1 165 2.0E-36 T 14-09-2016 AY555_RS04000 1d9fcb10770600e3049a87884465ba38 165 PANTHER PTHR33867:SF1 1 165 2.0E-36 T 14-09-2016 AY555_RS04000 1d9fcb10770600e3049a87884465ba38 165 SUPERFAMILY SSF74942 84 153 1.05E-13 T 14-09-2016 IPR028998 Ribosome maturation factor RimP, C-terminal AY555_RS04000 1d9fcb10770600e3049a87884465ba38 165 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 5 152 22.303 T 14-09-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 AY555_RS04000 1d9fcb10770600e3049a87884465ba38 165 SUPERFAMILY SSF75420 3 83 3.4E-19 T 14-09-2016 IPR028989 Ribosome maturation factor RimP, N-terminal AY555_RS04000 1d9fcb10770600e3049a87884465ba38 165 Gene3D G3DSA:3.30.300.70 3 80 7.7E-23 T 14-09-2016 IPR028989 Ribosome maturation factor RimP, N-terminal AY555_RS06130 05cacb05e792840bb235d438ab87b16f 467 PANTHER PTHR23135:SF2 1 466 7.2E-145 T 14-09-2016 AY555_RS06130 05cacb05e792840bb235d438ab87b16f 467 SUPERFAMILY SSF53244 316 452 9.16E-41 T 14-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AY555_RS06130 05cacb05e792840bb235d438ab87b16f 467 SUPERFAMILY SSF51984 8 96 7.85E-12 T 14-09-2016 AY555_RS06130 05cacb05e792840bb235d438ab87b16f 467 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 113 136 - T 14-09-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 AY555_RS06130 05cacb05e792840bb235d438ab87b16f 467 SUPERFAMILY SSF53623 106 314 1.98E-49 T 14-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AY555_RS06130 05cacb05e792840bb235d438ab87b16f 467 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 10 452 32.775 T 14-09-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AY555_RS06130 05cacb05e792840bb235d438ab87b16f 467 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 450 3.6E-115 T 14-09-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AY555_RS06130 05cacb05e792840bb235d438ab87b16f 467 Gene3D G3DSA:3.40.1190.10 104 316 1.2E-54 T 14-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AY555_RS06130 05cacb05e792840bb235d438ab87b16f 467 PANTHER PTHR23135 1 466 7.2E-145 T 14-09-2016 AY555_RS06130 05cacb05e792840bb235d438ab87b16f 467 Gene3D G3DSA:3.40.50.720 10 95 3.4E-12 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS06130 05cacb05e792840bb235d438ab87b16f 467 Pfam PF08245 Mur ligase middle domain 115 297 1.1E-28 T 14-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AY555_RS06130 05cacb05e792840bb235d438ab87b16f 467 Gene3D G3DSA:3.90.190.20 317 449 3.9E-45 T 14-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AY555_RS02490 15f7e8520ab865328fcfdbde8f5772ec 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 103 116 4.9E-7 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AY555_RS02490 15f7e8520ab865328fcfdbde8f5772ec 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 216 230 4.9E-7 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AY555_RS02490 15f7e8520ab865328fcfdbde8f5772ec 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 55 70 4.9E-7 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AY555_RS02490 15f7e8520ab865328fcfdbde8f5772ec 277 Pfam PF12146 Serine aminopeptidase, S33 26 260 2.5E-56 T 14-09-2016 IPR022742 Serine aminopeptidase, S33 AY555_RS02490 15f7e8520ab865328fcfdbde8f5772ec 277 SUPERFAMILY SSF53474 5 276 4.31E-41 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AY555_RS02490 15f7e8520ab865328fcfdbde8f5772ec 277 PANTHER PTHR11614 1 277 2.1E-46 T 14-09-2016 AY555_RS02490 15f7e8520ab865328fcfdbde8f5772ec 277 Gene3D G3DSA:3.40.50.1820 11 275 8.0E-46 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AY555_RS04895 50cc3fd8e893df54163aca650009ace8 442 Pfam PF00209 Sodium:neurotransmitter symporter family 3 119 1.4E-26 T 14-09-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AY555_RS04895 50cc3fd8e893df54163aca650009ace8 442 Pfam PF00209 Sodium:neurotransmitter symporter family 147 439 3.5E-32 T 14-09-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AY555_RS04895 50cc3fd8e893df54163aca650009ace8 442 SUPERFAMILY SSF161070 3 441 2.35E-134 T 14-09-2016 AY555_RS04895 50cc3fd8e893df54163aca650009ace8 442 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 27 41 - T 14-09-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AY555_RS04895 50cc3fd8e893df54163aca650009ace8 442 PANTHER PTHR11616:SF167 3 441 2.7E-146 T 14-09-2016 AY555_RS04895 50cc3fd8e893df54163aca650009ace8 442 PANTHER PTHR11616 3 441 2.7E-146 T 14-09-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AY555_RS04895 50cc3fd8e893df54163aca650009ace8 442 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 85 111 3.3E-13 T 14-09-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AY555_RS04895 50cc3fd8e893df54163aca650009ace8 442 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 40 59 3.3E-13 T 14-09-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AY555_RS04895 50cc3fd8e893df54163aca650009ace8 442 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 11 32 3.3E-13 T 14-09-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AY555_RS07200 7c306a8d76bf15bcaaa9c3670a669eba 397 PRINTS PR00471 Acetate kinase family signature 322 338 1.8E-39 T 14-09-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AY555_RS07200 7c306a8d76bf15bcaaa9c3670a669eba 397 PRINTS PR00471 Acetate kinase family signature 300 313 1.8E-39 T 14-09-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AY555_RS07200 7c306a8d76bf15bcaaa9c3670a669eba 397 PRINTS PR00471 Acetate kinase family signature 6 17 1.8E-39 T 14-09-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AY555_RS07200 7c306a8d76bf15bcaaa9c3670a669eba 397 PRINTS PR00471 Acetate kinase family signature 374 386 1.8E-39 T 14-09-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AY555_RS07200 7c306a8d76bf15bcaaa9c3670a669eba 397 PRINTS PR00471 Acetate kinase family signature 176 189 1.8E-39 T 14-09-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AY555_RS07200 7c306a8d76bf15bcaaa9c3670a669eba 397 PRINTS PR00471 Acetate kinase family signature 205 226 1.8E-39 T 14-09-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AY555_RS07200 7c306a8d76bf15bcaaa9c3670a669eba 397 Pfam PF00871 Acetokinase family 6 387 2.7E-100 T 14-09-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AY555_RS07200 7c306a8d76bf15bcaaa9c3670a669eba 397 PANTHER PTHR21060:SF11 2 394 7.6E-141 T 14-09-2016 AY555_RS07200 7c306a8d76bf15bcaaa9c3670a669eba 397 PANTHER PTHR21060 2 394 7.6E-141 T 14-09-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AY555_RS07200 7c306a8d76bf15bcaaa9c3670a669eba 397 PIRSF PIRSF000722 2 397 1.0E-132 T 14-09-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AY555_RS07200 7c306a8d76bf15bcaaa9c3670a669eba 397 Hamap MF_00020 Acetate kinase [ackA]. 1 396 150.945 T 14-09-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AY555_RS07200 7c306a8d76bf15bcaaa9c3670a669eba 397 Gene3D G3DSA:3.30.420.40 93 207 1.1E-5 T 14-09-2016 AY555_RS07200 7c306a8d76bf15bcaaa9c3670a669eba 397 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 205 222 - T 14-09-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AY555_RS07200 7c306a8d76bf15bcaaa9c3670a669eba 397 SUPERFAMILY SSF53067 161 393 1.22E-75 T 14-09-2016 AY555_RS07200 7c306a8d76bf15bcaaa9c3670a669eba 397 TIGRFAM TIGR00016 ackA: acetate kinase 3 393 2.8E-101 T 14-09-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AY555_RS07200 7c306a8d76bf15bcaaa9c3670a669eba 397 SUPERFAMILY SSF53067 6 196 2.05E-52 T 14-09-2016 AY555_RS07200 7c306a8d76bf15bcaaa9c3670a669eba 397 Gene3D G3DSA:3.30.420.40 208 392 2.4E-68 T 14-09-2016 AY555_RS07200 7c306a8d76bf15bcaaa9c3670a669eba 397 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 14-09-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AY555_RS08045 e53c558d75b9f056184f9960d9102d81 420 Gene3D G3DSA:3.30.9.10 271 361 2.4E-14 T 14-09-2016 AY555_RS08045 e53c558d75b9f056184f9960d9102d81 420 Gene3D G3DSA:3.30.9.10 136 191 2.4E-14 T 14-09-2016 AY555_RS08045 e53c558d75b9f056184f9960d9102d81 420 PANTHER PTHR13847:SF148 108 409 3.2E-122 T 14-09-2016 AY555_RS08045 e53c558d75b9f056184f9960d9102d81 420 PANTHER PTHR13847 108 409 3.2E-122 T 14-09-2016 AY555_RS08045 e53c558d75b9f056184f9960d9102d81 420 SUPERFAMILY SSF54373 271 362 1.15E-16 T 14-09-2016 AY555_RS08045 e53c558d75b9f056184f9960d9102d81 420 SUPERFAMILY SSF51905 108 271 8.55E-50 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS08045 e53c558d75b9f056184f9960d9102d81 420 SUPERFAMILY SSF51905 362 415 8.55E-50 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS08045 e53c558d75b9f056184f9960d9102d81 420 SUPERFAMILY SSF51905 2 54 8.55E-50 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS08045 e53c558d75b9f056184f9960d9102d81 420 PANTHER PTHR13847 1 63 3.2E-122 T 14-09-2016 AY555_RS08045 e53c558d75b9f056184f9960d9102d81 420 Gene3D G3DSA:3.50.50.60 362 415 3.5E-46 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS08045 e53c558d75b9f056184f9960d9102d81 420 Gene3D G3DSA:3.50.50.60 2 58 3.5E-46 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS08045 e53c558d75b9f056184f9960d9102d81 420 Gene3D G3DSA:3.50.50.60 192 270 3.5E-46 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS08045 e53c558d75b9f056184f9960d9102d81 420 Gene3D G3DSA:3.50.50.60 109 131 3.5E-46 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS08045 e53c558d75b9f056184f9960d9102d81 420 Pfam PF01266 FAD dependent oxidoreductase 2 400 4.5E-62 T 14-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AY555_RS08045 e53c558d75b9f056184f9960d9102d81 420 PANTHER PTHR13847:SF148 1 63 3.2E-122 T 14-09-2016 AY555_RS03135 8c6e22820304aa45a16a5021b7800b23 852 PANTHER PTHR30287 14 852 6.1E-105 T 14-09-2016 AY555_RS03135 8c6e22820304aa45a16a5021b7800b23 852 Pfam PF02687 FtsX-like permease family 732 841 1.1E-9 T 14-09-2016 IPR003838 ABC transporter permease protein domain GO:0016020 AY555_RS03135 8c6e22820304aa45a16a5021b7800b23 852 Pfam PF02687 FtsX-like permease family 276 389 3.2E-8 T 14-09-2016 IPR003838 ABC transporter permease protein domain GO:0016020 AY555_RS04890 8ef6acc5df02134e5419a5c4edc379bd 310 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 1 310 47.701 T 14-09-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 AY555_RS04890 8ef6acc5df02134e5419a5c4edc379bd 310 SUPERFAMILY SSF53271 66 300 5.83E-60 T 14-09-2016 IPR029057 Phosphoribosyltransferase-like AY555_RS04890 8ef6acc5df02134e5419a5c4edc379bd 310 SMART SM01400 1 117 3.3E-74 T 14-09-2016 AY555_RS04890 8ef6acc5df02134e5419a5c4edc379bd 310 Gene3D G3DSA:3.40.50.2020 156 281 1.2E-47 T 14-09-2016 IPR029057 Phosphoribosyltransferase-like AY555_RS04890 8ef6acc5df02134e5419a5c4edc379bd 310 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 125 140 - T 14-09-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 AY555_RS04890 8ef6acc5df02134e5419a5c4edc379bd 310 PANTHER PTHR10210 1 310 5.4E-171 T 14-09-2016 AY555_RS04890 8ef6acc5df02134e5419a5c4edc379bd 310 PANTHER PTHR10210:SF41 1 310 5.4E-171 T 14-09-2016 AY555_RS04890 8ef6acc5df02134e5419a5c4edc379bd 310 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 1 117 1.3E-45 T 14-09-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 AY555_RS04890 8ef6acc5df02134e5419a5c4edc379bd 310 Gene3D G3DSA:3.40.50.2020 1 155 2.2E-71 T 14-09-2016 IPR029057 Phosphoribosyltransferase-like AY555_RS04890 8ef6acc5df02134e5419a5c4edc379bd 310 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 1 310 6.1E-113 T 14-09-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 AY555_RS04890 8ef6acc5df02134e5419a5c4edc379bd 310 Pfam PF14572 Phosphoribosyl synthetase-associated domain 201 309 6.3E-26 T 14-09-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 AY555_RS09645 01421c6b8c71df316199c84a2f022f36 490 SUPERFAMILY SSF58104 247 484 4.19E-42 T 14-09-2016 AY555_RS09645 01421c6b8c71df316199c84a2f022f36 490 Pfam PF08448 PAS fold 140 248 1.3E-5 T 14-09-2016 IPR013656 PAS fold-4 AY555_RS09645 01421c6b8c71df316199c84a2f022f36 490 Gene3D G3DSA:1.10.287.950 266 463 1.8E-33 T 14-09-2016 AY555_RS09645 01421c6b8c71df316199c84a2f022f36 490 SUPERFAMILY SSF55785 128 239 5.14E-7 T 14-09-2016 IPR000014 PAS domain AY555_RS09645 01421c6b8c71df316199c84a2f022f36 490 Gene3D G3DSA:3.30.450.20 14 115 1.8E-4 T 14-09-2016 AY555_RS09645 01421c6b8c71df316199c84a2f022f36 490 SMART SM00283 241 485 2.5E-19 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AY555_RS09645 01421c6b8c71df316199c84a2f022f36 490 PANTHER PTHR32089:SF56 241 488 1.9E-34 T 14-09-2016 AY555_RS09645 01421c6b8c71df316199c84a2f022f36 490 PANTHER PTHR32089 241 488 1.9E-34 T 14-09-2016 AY555_RS09645 01421c6b8c71df316199c84a2f022f36 490 Gene3D G3DSA:3.30.450.20 138 259 1.9E-9 T 14-09-2016 AY555_RS09645 01421c6b8c71df316199c84a2f022f36 490 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 372 401 2.3E-16 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AY555_RS09645 01421c6b8c71df316199c84a2f022f36 490 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 266 295 2.3E-16 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AY555_RS09645 01421c6b8c71df316199c84a2f022f36 490 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 343 370 2.3E-16 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AY555_RS09645 01421c6b8c71df316199c84a2f022f36 490 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 314 474 2.0E-24 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AY555_RS09320 56f3081bb9179661c31f6ad747aab385 235 Gene3D G3DSA:1.10.10.10 166 228 4.4E-20 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS09320 56f3081bb9179661c31f6ad747aab385 235 Gene3D G3DSA:3.40.50.2300 1 127 1.6E-25 T 14-09-2016 AY555_RS09320 56f3081bb9179661c31f6ad747aab385 235 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 202 3.0E-10 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AY555_RS09320 56f3081bb9179661c31f6ad747aab385 235 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 202 214 3.0E-10 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AY555_RS09320 56f3081bb9179661c31f6ad747aab385 235 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 186 3.0E-10 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AY555_RS09320 56f3081bb9179661c31f6ad747aab385 235 SMART SM00421 169 226 7.1E-18 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AY555_RS09320 56f3081bb9179661c31f6ad747aab385 235 PANTHER PTHR26402 171 228 4.8E-45 T 14-09-2016 AY555_RS09320 56f3081bb9179661c31f6ad747aab385 235 SMART SM00448 1 115 3.1E-21 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS09320 56f3081bb9179661c31f6ad747aab385 235 PANTHER PTHR26402 1 154 4.8E-45 T 14-09-2016 AY555_RS09320 56f3081bb9179661c31f6ad747aab385 235 Pfam PF00196 Bacterial regulatory proteins, luxR family 171 226 1.4E-15 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AY555_RS09320 56f3081bb9179661c31f6ad747aab385 235 PANTHER PTHR26402:SF511 1 154 4.8E-45 T 14-09-2016 AY555_RS09320 56f3081bb9179661c31f6ad747aab385 235 Pfam PF00072 Response regulator receiver domain 4 115 1.4E-18 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS09320 56f3081bb9179661c31f6ad747aab385 235 SUPERFAMILY SSF46894 161 228 4.42E-17 T 14-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AY555_RS09320 56f3081bb9179661c31f6ad747aab385 235 PANTHER PTHR26402:SF511 171 228 4.8E-45 T 14-09-2016 AY555_RS09320 56f3081bb9179661c31f6ad747aab385 235 SUPERFAMILY SSF52172 1 130 1.71E-25 T 14-09-2016 IPR011006 CheY-like superfamily AY555_RS03665 cc1f603d962760377dbb3fba14be57db 207 Gene3D G3DSA:3.20.20.70 30 206 3.8E-30 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS03665 cc1f603d962760377dbb3fba14be57db 207 Pfam PF02581 Thiamine monophosphate synthase/TENI 53 206 3.6E-28 T 14-09-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 AY555_RS03665 cc1f603d962760377dbb3fba14be57db 207 SUPERFAMILY SSF51391 27 206 1.57E-32 T 14-09-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 AY555_RS03665 cc1f603d962760377dbb3fba14be57db 207 PANTHER PTHR20857 17 207 3.5E-15 T 14-09-2016 AY555_RS05525 72240027bcb4ab040d71448b009c8874 235 Pfam PF08889 WbqC-like protein family 7 220 3.7E-73 T 14-09-2016 IPR014985 WbqC-like protein family AY555_RS09110 7f19d637f15bd2108d49dbf3da15d6e2 440 SUPERFAMILY SSF103473 8 409 1.83E-39 T 14-09-2016 IPR020846 Major facilitator superfamily domain AY555_RS09110 7f19d637f15bd2108d49dbf3da15d6e2 440 Gene3D G3DSA:1.20.1250.20 252 408 1.4E-9 T 14-09-2016 AY555_RS09110 7f19d637f15bd2108d49dbf3da15d6e2 440 PANTHER PTHR23514:SF7 2 172 2.3E-113 T 14-09-2016 AY555_RS09110 7f19d637f15bd2108d49dbf3da15d6e2 440 PANTHER PTHR23514 190 416 2.3E-113 T 14-09-2016 AY555_RS09110 7f19d637f15bd2108d49dbf3da15d6e2 440 PANTHER PTHR23514:SF7 190 416 2.3E-113 T 14-09-2016 AY555_RS09110 7f19d637f15bd2108d49dbf3da15d6e2 440 Gene3D G3DSA:1.20.1250.20 15 215 4.5E-20 T 14-09-2016 AY555_RS09110 7f19d637f15bd2108d49dbf3da15d6e2 440 PANTHER PTHR23514 2 172 2.3E-113 T 14-09-2016 AY555_RS09110 7f19d637f15bd2108d49dbf3da15d6e2 440 Pfam PF07690 Major Facilitator Superfamily 25 374 1.0E-21 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AY555_RS09110 7f19d637f15bd2108d49dbf3da15d6e2 440 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 94 414 7.2E-111 T 14-09-2016 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0009276|GO:0015757|GO:0015758|GO:0016021 AY555_RS01295 1cd2a8584b55dc845a29375912cefcce 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 14-09-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AY555_RS01295 1cd2a8584b55dc845a29375912cefcce 157 SUPERFAMILY SSF46557 3 78 3.14E-29 T 14-09-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AY555_RS01295 1cd2a8584b55dc845a29375912cefcce 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 32.683 T 14-09-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AY555_RS01295 1cd2a8584b55dc845a29375912cefcce 157 Gene3D G3DSA:1.10.287.180 1 75 1.7E-34 T 14-09-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AY555_RS01295 1cd2a8584b55dc845a29375912cefcce 157 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 154 2.6E-59 T 14-09-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 AY555_RS01295 1cd2a8584b55dc845a29375912cefcce 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 14-09-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AY555_RS01295 1cd2a8584b55dc845a29375912cefcce 157 Gene3D G3DSA:3.10.50.30 76 156 4.0E-30 T 14-09-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AY555_RS01295 1cd2a8584b55dc845a29375912cefcce 157 PIRSF PIRSF006092 1 157 9.2E-53 T 14-09-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AY555_RS01295 1cd2a8584b55dc845a29375912cefcce 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 155 7.4E-28 T 14-09-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AY555_RS01295 1cd2a8584b55dc845a29375912cefcce 157 PANTHER PTHR30437 1 156 1.5E-68 T 14-09-2016 AY555_RS01295 1cd2a8584b55dc845a29375912cefcce 157 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 2.3E-32 T 14-09-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AY555_RS01295 1cd2a8584b55dc845a29375912cefcce 157 SUPERFAMILY SSF54534 81 155 2.88E-23 T 14-09-2016 AY555_RS03430 a5de610ea4516b30711c732b7c2c759d 828 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 22 187 3.0E-20 T 14-09-2016 IPR025199 DNA translocase FtsK, 4TM region AY555_RS03430 a5de610ea4516b30711c732b7c2c759d 828 Pfam PF09397 Ftsk gamma domain 764 820 1.2E-25 T 14-09-2016 IPR018541 FtsK gamma domain AY555_RS03430 a5de610ea4516b30711c732b7c2c759d 828 SMART SM00843 758 823 1.3E-36 T 14-09-2016 IPR018541 FtsK gamma domain AY555_RS03430 a5de610ea4516b30711c732b7c2c759d 828 SUPERFAMILY SSF52540 450 722 2.4E-48 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS03430 a5de610ea4516b30711c732b7c2c759d 828 SUPERFAMILY SSF46785 760 823 2.83E-21 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS03430 a5de610ea4516b30711c732b7c2c759d 828 PANTHER PTHR22683:SF41 304 822 4.5E-232 T 14-09-2016 AY555_RS03430 a5de610ea4516b30711c732b7c2c759d 828 SMART SM00382 470 675 3.2E-4 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS03430 a5de610ea4516b30711c732b7c2c759d 828 Pfam PF01580 FtsK/SpoIIIE family 437 654 3.3E-67 T 14-09-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AY555_RS03430 a5de610ea4516b30711c732b7c2c759d 828 PANTHER PTHR22683 304 822 4.5E-232 T 14-09-2016 AY555_RS03430 a5de610ea4516b30711c732b7c2c759d 828 Gene3D G3DSA:3.40.50.300 412 574 4.5E-92 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS03430 a5de610ea4516b30711c732b7c2c759d 828 Gene3D G3DSA:3.40.50.300 607 719 4.5E-92 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS06645 7732a8fd728539ee90dc02af7b7c47b6 596 SUPERFAMILY SSF55874 431 586 1.26E-35 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS06645 7732a8fd728539ee90dc02af7b7c47b6 596 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 474 585 4.1E-19 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS06645 7732a8fd728539ee90dc02af7b7c47b6 596 PRINTS PR00344 Bacterial sensor protein C-terminal signature 572 585 4.5E-14 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS06645 7732a8fd728539ee90dc02af7b7c47b6 596 PRINTS PR00344 Bacterial sensor protein C-terminal signature 516 530 4.5E-14 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS06645 7732a8fd728539ee90dc02af7b7c47b6 596 PRINTS PR00344 Bacterial sensor protein C-terminal signature 534 544 4.5E-14 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS06645 7732a8fd728539ee90dc02af7b7c47b6 596 PRINTS PR00344 Bacterial sensor protein C-terminal signature 547 565 4.5E-14 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS06645 7732a8fd728539ee90dc02af7b7c47b6 596 Gene3D G3DSA:3.30.450.40 17 166 5.2E-7 T 14-09-2016 IPR029016 GAF domain-like AY555_RS06645 7732a8fd728539ee90dc02af7b7c47b6 596 Pfam PF12860 PAS fold 197 307 6.9E-15 T 14-09-2016 AY555_RS06645 7732a8fd728539ee90dc02af7b7c47b6 596 SMART SM00388 346 430 0.0056 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS06645 7732a8fd728539ee90dc02af7b7c47b6 596 Gene3D G3DSA:3.30.565.10 433 585 1.7E-34 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS06645 7732a8fd728539ee90dc02af7b7c47b6 596 Gene3D G3DSA:1.10.287.130 342 421 3.0E-4 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS06645 7732a8fd728539ee90dc02af7b7c47b6 596 PANTHER PTHR24423 342 592 1.2E-66 T 14-09-2016 AY555_RS06645 7732a8fd728539ee90dc02af7b7c47b6 596 PANTHER PTHR24423 161 318 1.2E-66 T 14-09-2016 AY555_RS06645 7732a8fd728539ee90dc02af7b7c47b6 596 Gene3D G3DSA:3.30.450.20 185 303 1.5E-9 T 14-09-2016 AY555_RS06645 7732a8fd728539ee90dc02af7b7c47b6 596 SUPERFAMILY SSF55785 182 301 4.57E-7 T 14-09-2016 IPR000014 PAS domain AY555_RS06645 7732a8fd728539ee90dc02af7b7c47b6 596 SUPERFAMILY SSF55781 17 169 4.17E-10 T 14-09-2016 IPR029016 GAF domain-like AY555_RS06645 7732a8fd728539ee90dc02af7b7c47b6 596 SMART SM00387 472 588 4.0E-27 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS01645 cd3ac85f35e3ad1978b1b47385b70917 126 PANTHER PTHR12919 2 124 3.1E-37 T 14-09-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS01645 cd3ac85f35e3ad1978b1b47385b70917 126 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 80 22.886 T 14-09-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS01645 cd3ac85f35e3ad1978b1b47385b70917 126 ProSitePatterns PS00732 Ribosomal protein S16 signature. 3 12 - T 14-09-2016 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS01645 cd3ac85f35e3ad1978b1b47385b70917 126 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 82 5.7E-29 T 14-09-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS01645 cd3ac85f35e3ad1978b1b47385b70917 126 SUPERFAMILY SSF54565 3 97 3.66E-29 T 14-09-2016 IPR023803 Ribosomal protein S16 domain AY555_RS01645 cd3ac85f35e3ad1978b1b47385b70917 126 Gene3D G3DSA:3.30.1320.10 3 85 1.3E-30 T 14-09-2016 IPR023803 Ribosomal protein S16 domain AY555_RS01645 cd3ac85f35e3ad1978b1b47385b70917 126 Pfam PF00886 Ribosomal protein S16 9 70 5.2E-23 T 14-09-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS01240 b123241a097b0b8770420f608ee5bec5 559 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AY555_RS01240 b123241a097b0b8770420f608ee5bec5 559 Gene3D G3DSA:3.40.50.300 326 540 1.1E-47 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS01240 b123241a097b0b8770420f608ee5bec5 559 Pfam PF12848 ABC transporter 234 302 4.4E-14 T 14-09-2016 IPR032781 ABC-transporter extension domain AY555_RS01240 b123241a097b0b8770420f608ee5bec5 559 SUPERFAMILY SSF52540 308 526 9.77E-48 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS01240 b123241a097b0b8770420f608ee5bec5 559 SMART SM00382 352 528 1.4E-11 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS01240 b123241a097b0b8770420f608ee5bec5 559 SMART SM00382 33 236 1.1E-8 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS01240 b123241a097b0b8770420f608ee5bec5 559 PANTHER PTHR19211:SF7 5 559 0.0 T 14-09-2016 AY555_RS01240 b123241a097b0b8770420f608ee5bec5 559 PANTHER PTHR19211 5 559 0.0 T 14-09-2016 AY555_RS01240 b123241a097b0b8770420f608ee5bec5 559 SUPERFAMILY SSF52540 10 248 7.17E-50 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS01240 b123241a097b0b8770420f608ee5bec5 559 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 5 556 8.1E-295 T 14-09-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD AY555_RS01240 b123241a097b0b8770420f608ee5bec5 559 Gene3D G3DSA:3.40.50.300 9 111 2.2E-52 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS01240 b123241a097b0b8770420f608ee5bec5 559 Gene3D G3DSA:3.40.50.300 145 292 2.2E-52 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS01240 b123241a097b0b8770420f608ee5bec5 559 Pfam PF00005 ABC transporter 344 477 1.2E-24 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AY555_RS01240 b123241a097b0b8770420f608ee5bec5 559 Pfam PF00005 ABC transporter 26 195 2.1E-25 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AY555_RS03045 6f6f95e379296a8d6af4c46920d9ed9a 508 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 476 483 - T 14-09-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AY555_RS03045 6f6f95e379296a8d6af4c46920d9ed9a 508 PANTHER PTHR32248 2 498 4.4E-147 T 14-09-2016 AY555_RS03045 6f6f95e379296a8d6af4c46920d9ed9a 508 Pfam PF04552 Sigma-54, DNA binding domain 337 496 2.7E-67 T 14-09-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding AY555_RS03045 6f6f95e379296a8d6af4c46920d9ed9a 508 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 11 495 4.0E-128 T 14-09-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AY555_RS03045 6f6f95e379296a8d6af4c46920d9ed9a 508 PIRSF PIRSF000774 1 498 6.3E-146 T 14-09-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AY555_RS03045 6f6f95e379296a8d6af4c46920d9ed9a 508 PRINTS PR00045 Sigma-54 factor signature 208 225 2.0E-32 T 14-09-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AY555_RS03045 6f6f95e379296a8d6af4c46920d9ed9a 508 PRINTS PR00045 Sigma-54 factor signature 471 489 2.0E-32 T 14-09-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AY555_RS03045 6f6f95e379296a8d6af4c46920d9ed9a 508 PRINTS PR00045 Sigma-54 factor signature 396 408 2.0E-32 T 14-09-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AY555_RS03045 6f6f95e379296a8d6af4c46920d9ed9a 508 PRINTS PR00045 Sigma-54 factor signature 412 423 2.0E-32 T 14-09-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AY555_RS03045 6f6f95e379296a8d6af4c46920d9ed9a 508 Pfam PF04963 Sigma-54 factor, core binding domain 137 322 5.9E-48 T 14-09-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 AY555_RS03045 6f6f95e379296a8d6af4c46920d9ed9a 508 PANTHER PTHR32248:SF4 2 498 4.4E-147 T 14-09-2016 AY555_RS03045 6f6f95e379296a8d6af4c46920d9ed9a 508 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 6 50 1.1E-18 T 14-09-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AY555_RS03045 6f6f95e379296a8d6af4c46920d9ed9a 508 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 384 403 - T 14-09-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AY555_RS02445 c1cb87d6be06c7acc52982bed05c1bb2 352 SUPERFAMILY SSF48150 9 223 7.85E-72 T 14-09-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AY555_RS02445 c1cb87d6be06c7acc52982bed05c1bb2 352 Pfam PF14815 NUDIX domain 235 344 1.6E-23 T 14-09-2016 IPR029119 MutY, C-terminal AY555_RS02445 c1cb87d6be06c7acc52982bed05c1bb2 352 Gene3D G3DSA:1.10.1670.10 127 225 2.3E-38 T 14-09-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal AY555_RS02445 c1cb87d6be06c7acc52982bed05c1bb2 352 ProSitePatterns PS01155 Endonuclease III family signature. 105 134 - T 14-09-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 AY555_RS02445 c1cb87d6be06c7acc52982bed05c1bb2 352 Pfam PF00633 Helix-hairpin-helix motif 103 131 3.6E-6 T 14-09-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 AY555_RS02445 c1cb87d6be06c7acc52982bed05c1bb2 352 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 39 157 5.1E-19 T 14-09-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 AY555_RS02445 c1cb87d6be06c7acc52982bed05c1bb2 352 SUPERFAMILY SSF55811 221 347 8.33E-22 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AY555_RS02445 c1cb87d6be06c7acc52982bed05c1bb2 352 PANTHER PTHR10359 10 347 2.1E-89 T 14-09-2016 AY555_RS02445 c1cb87d6be06c7acc52982bed05c1bb2 352 Gene3D G3DSA:3.90.79.10 233 349 5.9E-19 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AY555_RS02445 c1cb87d6be06c7acc52982bed05c1bb2 352 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 10 267 1.2E-88 T 14-09-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 AY555_RS02445 c1cb87d6be06c7acc52982bed05c1bb2 352 Gene3D G3DSA:1.10.340.30 29 126 1.6E-41 T 14-09-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AY555_RS02445 c1cb87d6be06c7acc52982bed05c1bb2 352 SMART SM00478 42 191 3.3E-47 T 14-09-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 AY555_RS04195 0854acd4df4058eabbc31435a2fe9a8a 325 PANTHER PTHR30473 2 323 1.7E-144 T 14-09-2016 AY555_RS04195 0854acd4df4058eabbc31435a2fe9a8a 325 Gene3D G3DSA:3.40.50.300 107 311 2.4E-86 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04195 0854acd4df4058eabbc31435a2fe9a8a 325 Pfam PF02562 PhoH-like protein 108 311 2.4E-91 T 14-09-2016 IPR003714 PhoH-like protein GO:0005524 AY555_RS04195 0854acd4df4058eabbc31435a2fe9a8a 325 PANTHER PTHR30473:SF1 2 323 1.7E-144 T 14-09-2016 AY555_RS04195 0854acd4df4058eabbc31435a2fe9a8a 325 SUPERFAMILY SSF52540 101 283 7.53E-39 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS01515 df76a8daa7c5779c51611ddf87208073 387 Pfam PF00005 ABC transporter 45 186 1.2E-36 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AY555_RS01515 df76a8daa7c5779c51611ddf87208073 387 PANTHER PTHR24220:SF481 30 385 2.5E-167 T 14-09-2016 AY555_RS01515 df76a8daa7c5779c51611ddf87208073 387 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 59 385 2.9E-126 T 14-09-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 AY555_RS01515 df76a8daa7c5779c51611ddf87208073 387 Pfam PF08402 TOBE domain 305 384 7.4E-16 T 14-09-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AY555_RS01515 df76a8daa7c5779c51611ddf87208073 387 PANTHER PTHR24220 30 385 2.5E-167 T 14-09-2016 AY555_RS01515 df76a8daa7c5779c51611ddf87208073 387 SUPERFAMILY SSF52540 28 267 6.19E-88 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS01515 df76a8daa7c5779c51611ddf87208073 387 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AY555_RS01515 df76a8daa7c5779c51611ddf87208073 387 Gene3D G3DSA:3.40.50.300 22 262 7.0E-80 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS01515 df76a8daa7c5779c51611ddf87208073 387 SUPERFAMILY SSF50331 262 384 2.04E-17 T 14-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal AY555_RS01515 df76a8daa7c5779c51611ddf87208073 387 SMART SM00382 53 236 3.1E-19 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS00925 cc088f9c27396075c04b2a20659db861 65 PANTHER PTHR10916:SF0 4 64 2.1E-27 T 14-09-2016 AY555_RS00925 cc088f9c27396075c04b2a20659db861 65 TIGRFAM TIGR00012 L29: ribosomal protein uL29 6 61 1.9E-23 T 14-09-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00925 cc088f9c27396075c04b2a20659db861 65 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 61 17.736 T 14-09-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00925 cc088f9c27396075c04b2a20659db861 65 Pfam PF00831 Ribosomal L29 protein 5 61 6.4E-26 T 14-09-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00925 cc088f9c27396075c04b2a20659db861 65 SUPERFAMILY SSF46561 4 63 2.88E-22 T 14-09-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00925 cc088f9c27396075c04b2a20659db861 65 Gene3D G3DSA:1.10.287.310 4 63 1.8E-28 T 14-09-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00925 cc088f9c27396075c04b2a20659db861 65 PANTHER PTHR10916 4 64 2.1E-27 T 14-09-2016 AY555_RS05280 3c19f220f33417c7accf9abdb0a7bcee 292 Gene3D G3DSA:3.40.50.620 6 182 2.2E-74 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS05280 3c19f220f33417c7accf9abdb0a7bcee 292 Gene3D G3DSA:3.30.1300.10 186 289 3.4E-26 T 14-09-2016 AY555_RS05280 3c19f220f33417c7accf9abdb0a7bcee 292 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 11 287 1.8E-85 T 14-09-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 AY555_RS05280 3c19f220f33417c7accf9abdb0a7bcee 292 PANTHER PTHR21299:SF1 1 289 4.5E-117 T 14-09-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 AY555_RS05280 3c19f220f33417c7accf9abdb0a7bcee 292 Pfam PF02569 Pantoate-beta-alanine ligase 13 287 7.7E-97 T 14-09-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 AY555_RS05280 3c19f220f33417c7accf9abdb0a7bcee 292 SUPERFAMILY SSF52374 10 289 6.7E-102 T 14-09-2016 AY555_RS05280 3c19f220f33417c7accf9abdb0a7bcee 292 Hamap MF_00158 Pantothenate synthetase [panC]. 12 289 38.555 T 14-09-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 AY555_RS05280 3c19f220f33417c7accf9abdb0a7bcee 292 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 36 83 4.8E-8 T 14-09-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AY555_RS05280 3c19f220f33417c7accf9abdb0a7bcee 292 PANTHER PTHR21299 1 289 4.5E-117 T 14-09-2016 AY555_RS02665 9c1fd820b0a159b1d21838157c315df7 565 SUPERFAMILY SSF50249 259 358 1.34E-25 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS02665 9c1fd820b0a159b1d21838157c315df7 565 SUPERFAMILY SSF50249 346 444 2.31E-21 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS02665 9c1fd820b0a159b1d21838157c315df7 565 SUPERFAMILY SSF50249 194 281 6.51E-26 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS02665 9c1fd820b0a159b1d21838157c315df7 565 SUPERFAMILY SSF50249 110 189 2.83E-13 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS02665 9c1fd820b0a159b1d21838157c315df7 565 PANTHER PTHR10724 7 517 1.0E-219 T 14-09-2016 AY555_RS02665 9c1fd820b0a159b1d21838157c315df7 565 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 7 523 2.0E-199 T 14-09-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AY555_RS02665 9c1fd820b0a159b1d21838157c315df7 565 Gene3D G3DSA:2.40.50.140 363 442 8.7E-24 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS02665 9c1fd820b0a159b1d21838157c315df7 565 Gene3D G3DSA:2.40.50.140 25 103 1.3E-10 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS02665 9c1fd820b0a159b1d21838157c315df7 565 Gene3D G3DSA:2.40.50.140 197 281 2.8E-29 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS02665 9c1fd820b0a159b1d21838157c315df7 565 Gene3D G3DSA:2.40.50.140 282 362 1.0E-26 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS02665 9c1fd820b0a159b1d21838157c315df7 565 SUPERFAMILY SSF50249 11 116 4.1E-18 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS02665 9c1fd820b0a159b1d21838157c315df7 565 PANTHER PTHR10724:SF6 7 517 1.0E-219 T 14-09-2016 AY555_RS02665 9c1fd820b0a159b1d21838157c315df7 565 PIRSF PIRSF002111 1 537 3.6E-202 T 14-09-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AY555_RS02665 9c1fd820b0a159b1d21838157c315df7 565 SMART SM00316 279 351 9.2E-25 T 14-09-2016 IPR022967 RNA-binding domain, S1 AY555_RS02665 9c1fd820b0a159b1d21838157c315df7 565 SMART SM00316 194 264 1.6E-26 T 14-09-2016 IPR022967 RNA-binding domain, S1 AY555_RS02665 9c1fd820b0a159b1d21838157c315df7 565 SMART SM00316 366 438 4.6E-20 T 14-09-2016 IPR022967 RNA-binding domain, S1 AY555_RS02665 9c1fd820b0a159b1d21838157c315df7 565 SMART SM00316 23 91 4.9E-7 T 14-09-2016 IPR022967 RNA-binding domain, S1 AY555_RS02665 9c1fd820b0a159b1d21838157c315df7 565 SMART SM00316 453 523 8.9E-17 T 14-09-2016 IPR022967 RNA-binding domain, S1 AY555_RS02665 9c1fd820b0a159b1d21838157c315df7 565 SMART SM00316 107 175 1.1E-5 T 14-09-2016 IPR022967 RNA-binding domain, S1 AY555_RS02665 9c1fd820b0a159b1d21838157c315df7 565 Gene3D G3DSA:2.40.50.140 451 535 1.2E-16 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS02665 9c1fd820b0a159b1d21838157c315df7 565 SUPERFAMILY SSF50249 433 538 8.21E-20 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS02665 9c1fd820b0a159b1d21838157c315df7 565 PRINTS PR00681 Ribosomal protein S1 signature 25 43 5.1E-83 T 14-09-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AY555_RS02665 9c1fd820b0a159b1d21838157c315df7 565 PRINTS PR00681 Ribosomal protein S1 signature 112 128 5.1E-83 T 14-09-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AY555_RS02665 9c1fd820b0a159b1d21838157c315df7 565 PRINTS PR00681 Ribosomal protein S1 signature 88 107 5.1E-83 T 14-09-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AY555_RS02665 9c1fd820b0a159b1d21838157c315df7 565 PRINTS PR00681 Ribosomal protein S1 signature 294 313 5.1E-83 T 14-09-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AY555_RS02665 9c1fd820b0a159b1d21838157c315df7 565 PRINTS PR00681 Ribosomal protein S1 signature 334 352 5.1E-83 T 14-09-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AY555_RS02665 9c1fd820b0a159b1d21838157c315df7 565 PRINTS PR00681 Ribosomal protein S1 signature 159 179 5.1E-83 T 14-09-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AY555_RS02665 9c1fd820b0a159b1d21838157c315df7 565 PRINTS PR00681 Ribosomal protein S1 signature 216 237 5.1E-83 T 14-09-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AY555_RS02665 9c1fd820b0a159b1d21838157c315df7 565 PRINTS PR00681 Ribosomal protein S1 signature 43 57 5.1E-83 T 14-09-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AY555_RS02665 9c1fd820b0a159b1d21838157c315df7 565 PRINTS PR00681 Ribosomal protein S1 signature 130 147 5.1E-83 T 14-09-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AY555_RS02665 9c1fd820b0a159b1d21838157c315df7 565 Pfam PF00575 S1 RNA binding domain 197 264 3.9E-19 T 14-09-2016 IPR003029 S1 domain GO:0003676 AY555_RS02665 9c1fd820b0a159b1d21838157c315df7 565 Pfam PF00575 S1 RNA binding domain 365 438 3.7E-18 T 14-09-2016 IPR003029 S1 domain GO:0003676 AY555_RS02665 9c1fd820b0a159b1d21838157c315df7 565 Pfam PF00575 S1 RNA binding domain 453 523 4.6E-15 T 14-09-2016 IPR003029 S1 domain GO:0003676 AY555_RS02665 9c1fd820b0a159b1d21838157c315df7 565 Pfam PF00575 S1 RNA binding domain 278 351 2.6E-19 T 14-09-2016 IPR003029 S1 domain GO:0003676 AY555_RS02665 9c1fd820b0a159b1d21838157c315df7 565 Pfam PF00575 S1 RNA binding domain 110 175 7.1E-10 T 14-09-2016 IPR003029 S1 domain GO:0003676 AY555_RS02665 9c1fd820b0a159b1d21838157c315df7 565 Pfam PF00575 S1 RNA binding domain 24 90 9.3E-7 T 14-09-2016 IPR003029 S1 domain GO:0003676 AY555_RS02665 9c1fd820b0a159b1d21838157c315df7 565 Gene3D G3DSA:2.40.50.140 104 176 1.5E-11 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS07325 6ae1f3a2b866b2090f52a008c58a4726 202 SUPERFAMILY SSF110111 54 176 1.96E-46 T 14-09-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain AY555_RS07325 6ae1f3a2b866b2090f52a008c58a4726 202 PANTHER PTHR21320 2 191 3.5E-58 T 14-09-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 AY555_RS07325 6ae1f3a2b866b2090f52a008c58a4726 202 PANTHER PTHR21320:SF3 2 191 3.5E-58 T 14-09-2016 AY555_RS07325 6ae1f3a2b866b2090f52a008c58a4726 202 PIRSF PIRSF005413 2 189 6.1E-63 T 14-09-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 AY555_RS07325 6ae1f3a2b866b2090f52a008c58a4726 202 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 29 173 9.4E-51 T 14-09-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 AY555_RS07325 6ae1f3a2b866b2090f52a008c58a4726 202 Gene3D G3DSA:2.60.370.10 54 181 3.1E-49 T 14-09-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain AY555_RS07325 6ae1f3a2b866b2090f52a008c58a4726 202 Hamap MF_00155 Cytochrome c oxidase assembly protein CtaG [ctaG]. 1 179 33.858 T 14-09-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 AY555_RS06410 231e7abb49c2f4ea43a16887c5a61df4 512 PANTHER PTHR10799:SF709 263 512 9.4E-16 T 14-09-2016 AY555_RS06410 231e7abb49c2f4ea43a16887c5a61df4 512 SUPERFAMILY SSF52540 3 183 2.13E-21 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS06410 231e7abb49c2f4ea43a16887c5a61df4 512 PANTHER PTHR10799 263 512 9.4E-16 T 14-09-2016 AY555_RS06410 231e7abb49c2f4ea43a16887c5a61df4 512 Gene3D G3DSA:3.40.50.300 6 176 9.3E-8 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS06410 231e7abb49c2f4ea43a16887c5a61df4 512 PANTHER PTHR10799:SF709 6 136 9.4E-16 T 14-09-2016 AY555_RS06410 231e7abb49c2f4ea43a16887c5a61df4 512 Pfam PF00176 SNF2 family N-terminal domain 47 182 9.0E-9 T 14-09-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 AY555_RS06410 231e7abb49c2f4ea43a16887c5a61df4 512 SUPERFAMILY SSF52540 359 507 3.99E-18 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS06410 231e7abb49c2f4ea43a16887c5a61df4 512 SUPERFAMILY SSF52540 108 165 3.99E-18 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS06410 231e7abb49c2f4ea43a16887c5a61df4 512 Gene3D G3DSA:3.40.50.300 393 511 4.9E-4 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS06410 231e7abb49c2f4ea43a16887c5a61df4 512 PANTHER PTHR10799:SF709 152 188 9.4E-16 T 14-09-2016 AY555_RS06410 231e7abb49c2f4ea43a16887c5a61df4 512 PANTHER PTHR10799 6 136 9.4E-16 T 14-09-2016 AY555_RS06410 231e7abb49c2f4ea43a16887c5a61df4 512 PANTHER PTHR10799 152 188 9.4E-16 T 14-09-2016 AY555_RS06410 231e7abb49c2f4ea43a16887c5a61df4 512 SMART SM00487 1 239 0.0056 T 14-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AY555_RS01355 d651843b4e87740ef4b4ca5da91a3db1 633 Gene3D G3DSA:2.60.120.10 4 115 6.6E-27 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AY555_RS01355 d651843b4e87740ef4b4ca5da91a3db1 633 Pfam PF00027 Cyclic nucleotide-binding domain 6 93 1.3E-19 T 14-09-2016 IPR000595 Cyclic nucleotide-binding domain AY555_RS01355 d651843b4e87740ef4b4ca5da91a3db1 633 SUPERFAMILY SSF51206 3 115 3.4E-27 T 14-09-2016 IPR018490 Cyclic nucleotide-binding-like AY555_RS01355 d651843b4e87740ef4b4ca5da91a3db1 633 SMART SM00100 2 105 4.1E-12 T 14-09-2016 IPR000595 Cyclic nucleotide-binding domain AY555_RS01355 d651843b4e87740ef4b4ca5da91a3db1 633 PANTHER PTHR24567:SF30 2 115 2.0E-23 T 14-09-2016 AY555_RS01355 d651843b4e87740ef4b4ca5da91a3db1 633 Gene3D G3DSA:1.25.40.10 363 570 6.4E-6 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS01355 d651843b4e87740ef4b4ca5da91a3db1 633 PANTHER PTHR24567 2 115 2.0E-23 T 14-09-2016 AY555_RS01765 10a234a967a3a81f513c1d86f2b7bb38 465 Gene3D G3DSA:3.30.1330.90 17 165 1.9E-56 T 14-09-2016 IPR029009 Allosteric substrate binding domain AY555_RS01765 10a234a967a3a81f513c1d86f2b7bb38 465 Pfam PF03313 Serine dehydratase alpha chain 194 459 2.6E-101 T 14-09-2016 IPR005130 Serine dehydratase-like, alpha subunit AY555_RS01765 10a234a967a3a81f513c1d86f2b7bb38 465 SUPERFAMILY SSF143548 23 164 1.15E-47 T 14-09-2016 IPR029009 Allosteric substrate binding domain AY555_RS01765 10a234a967a3a81f513c1d86f2b7bb38 465 PANTHER PTHR30182 9 464 4.8E-229 T 14-09-2016 AY555_RS01765 10a234a967a3a81f513c1d86f2b7bb38 465 Pfam PF03315 Serine dehydratase beta chain 10 163 1.2E-58 T 14-09-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 AY555_RS01765 10a234a967a3a81f513c1d86f2b7bb38 465 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 10 462 2.4E-206 T 14-09-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 AY555_RS01765 10a234a967a3a81f513c1d86f2b7bb38 465 PANTHER PTHR30182:SF1 9 464 4.8E-229 T 14-09-2016 AY555_RS07675 4b3e23ba055193b601c1f2a705271386 368 Gene3D G3DSA:3.40.50.20 16 127 5.5E-31 T 14-09-2016 IPR016185 Pre-ATP-grasp domain AY555_RS07675 4b3e23ba055193b601c1f2a705271386 368 SUPERFAMILY SSF56059 119 316 5.21E-55 T 14-09-2016 AY555_RS07675 4b3e23ba055193b601c1f2a705271386 368 SUPERFAMILY SSF52440 15 115 2.45E-24 T 14-09-2016 IPR016185 Pre-ATP-grasp domain AY555_RS07675 4b3e23ba055193b601c1f2a705271386 368 PANTHER PTHR11609:SF5 4 367 5.6E-127 T 14-09-2016 AY555_RS07675 4b3e23ba055193b601c1f2a705271386 368 PANTHER PTHR11609 4 367 5.6E-127 T 14-09-2016 AY555_RS07675 4b3e23ba055193b601c1f2a705271386 368 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 23 368 38.352 T 14-09-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AY555_RS07675 4b3e23ba055193b601c1f2a705271386 368 Gene3D G3DSA:3.30.470.20 197 366 2.7E-58 T 14-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AY555_RS07675 4b3e23ba055193b601c1f2a705271386 368 Pfam PF02222 ATP-grasp domain 132 295 1.6E-48 T 14-09-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 AY555_RS07675 4b3e23ba055193b601c1f2a705271386 368 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 24 366 2.4E-107 T 14-09-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AY555_RS07675 4b3e23ba055193b601c1f2a705271386 368 SUPERFAMILY SSF51246 322 366 1.26E-12 T 14-09-2016 IPR011054 Rudiment single hybrid motif AY555_RS07675 4b3e23ba055193b601c1f2a705271386 368 Gene3D G3DSA:3.30.1490.20 133 196 9.4E-20 T 14-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AY555_RS03105 11d0ad5910223becb8b72071354044d1 161 Gene3D G3DSA:3.40.50.620 11 149 5.0E-17 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS03105 11d0ad5910223becb8b72071354044d1 161 Pfam PF00582 Universal stress protein family 11 149 1.7E-13 T 14-09-2016 IPR006016 UspA GO:0006950 AY555_RS03105 11d0ad5910223becb8b72071354044d1 161 SUPERFAMILY SSF52402 11 149 1.59E-12 T 14-09-2016 AY555_RS05920 5881eda87b2e4e2d785e3f848bae3090 541 Gene3D G3DSA:3.90.76.10 54 199 5.5E-25 T 14-09-2016 AY555_RS05920 5881eda87b2e4e2d785e3f848bae3090 541 Gene3D G3DSA:3.10.105.10 318 499 2.4E-41 T 14-09-2016 AY555_RS05920 5881eda87b2e4e2d785e3f848bae3090 541 Gene3D G3DSA:3.40.190.10 200 317 2.6E-29 T 14-09-2016 AY555_RS05920 5881eda87b2e4e2d785e3f848bae3090 541 PANTHER PTHR30290 8 292 6.4E-94 T 14-09-2016 AY555_RS05920 5881eda87b2e4e2d785e3f848bae3090 541 PANTHER PTHR30290 309 508 6.4E-94 T 14-09-2016 AY555_RS05920 5881eda87b2e4e2d785e3f848bae3090 541 PIRSF PIRSF002741 16 526 3.3E-74 T 14-09-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AY555_RS05920 5881eda87b2e4e2d785e3f848bae3090 541 SUPERFAMILY SSF53850 41 511 4.52E-101 T 14-09-2016 AY555_RS05920 5881eda87b2e4e2d785e3f848bae3090 541 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 85 451 3.4E-63 T 14-09-2016 IPR000914 Solute-binding protein family 5 domain AY555_RS09560 1c0da1719e85ca5be6df5e0236d7d7fb 731 PIRSF PIRSF001587 2 729 6.1E-292 T 14-09-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AY555_RS09560 1c0da1719e85ca5be6df5e0236d7d7fb 731 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 731 328.02 T 14-09-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AY555_RS09560 1c0da1719e85ca5be6df5e0236d7d7fb 731 SUPERFAMILY SSF55326 382 558 2.88E-56 T 14-09-2016 AY555_RS09560 1c0da1719e85ca5be6df5e0236d7d7fb 731 Gene3D G3DSA:3.90.650.10 209 351 3.2E-6 T 14-09-2016 IPR010918 AIR synthase-related protein, C-terminal domain AY555_RS09560 1c0da1719e85ca5be6df5e0236d7d7fb 731 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 14 725 4.3E-289 T 14-09-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AY555_RS09560 1c0da1719e85ca5be6df5e0236d7d7fb 731 SUPERFAMILY SSF56042 560 729 5.38E-32 T 14-09-2016 IPR010918 AIR synthase-related protein, C-terminal domain AY555_RS09560 1c0da1719e85ca5be6df5e0236d7d7fb 731 Gene3D G3DSA:3.30.1330.10 406 553 1.5E-57 T 14-09-2016 IPR016188 PurM-like, N-terminal domain AY555_RS09560 1c0da1719e85ca5be6df5e0236d7d7fb 731 Gene3D G3DSA:3.30.1330.10 46 190 1.3E-46 T 14-09-2016 IPR016188 PurM-like, N-terminal domain AY555_RS09560 1c0da1719e85ca5be6df5e0236d7d7fb 731 Pfam PF00586 AIR synthase related protein, N-terminal domain 84 184 2.5E-21 T 14-09-2016 IPR016188 PurM-like, N-terminal domain AY555_RS09560 1c0da1719e85ca5be6df5e0236d7d7fb 731 Pfam PF00586 AIR synthase related protein, N-terminal domain 433 550 2.7E-22 T 14-09-2016 IPR016188 PurM-like, N-terminal domain AY555_RS09560 1c0da1719e85ca5be6df5e0236d7d7fb 731 PANTHER PTHR10099:SF2 14 707 0.0 T 14-09-2016 AY555_RS09560 1c0da1719e85ca5be6df5e0236d7d7fb 731 SUPERFAMILY SSF56042 195 418 6.73E-60 T 14-09-2016 IPR010918 AIR synthase-related protein, C-terminal domain AY555_RS09560 1c0da1719e85ca5be6df5e0236d7d7fb 731 PANTHER PTHR10099 14 707 0.0 T 14-09-2016 AY555_RS09560 1c0da1719e85ca5be6df5e0236d7d7fb 731 Pfam PF02769 AIR synthase related protein, C-terminal domain 198 351 2.4E-33 T 14-09-2016 IPR010918 AIR synthase-related protein, C-terminal domain AY555_RS09560 1c0da1719e85ca5be6df5e0236d7d7fb 731 Pfam PF02769 AIR synthase related protein, C-terminal domain 564 701 2.6E-19 T 14-09-2016 IPR010918 AIR synthase-related protein, C-terminal domain AY555_RS09560 1c0da1719e85ca5be6df5e0236d7d7fb 731 SUPERFAMILY SSF55326 10 192 2.99E-49 T 14-09-2016 AY555_RS08520 f8680677ec3b7b8e74202f3e1a7d7c78 400 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 9 394 38.974 T 14-09-2016 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 AY555_RS08520 f8680677ec3b7b8e74202f3e1a7d7c78 400 Gene3D G3DSA:1.10.3210.10 291 396 4.0E-80 T 14-09-2016 IPR006674 HD domain AY555_RS08520 f8680677ec3b7b8e74202f3e1a7d7c78 400 Gene3D G3DSA:1.10.3210.10 32 234 4.0E-80 T 14-09-2016 IPR006674 HD domain AY555_RS08520 f8680677ec3b7b8e74202f3e1a7d7c78 400 PANTHER PTHR11373:SF25 8 166 1.3E-82 T 14-09-2016 AY555_RS08520 f8680677ec3b7b8e74202f3e1a7d7c78 400 SUPERFAMILY SSF109604 196 397 2.1E-88 T 14-09-2016 AY555_RS08520 f8680677ec3b7b8e74202f3e1a7d7c78 400 SUPERFAMILY SSF109604 21 166 2.1E-88 T 14-09-2016 AY555_RS08520 f8680677ec3b7b8e74202f3e1a7d7c78 400 PANTHER PTHR11373 8 166 1.3E-82 T 14-09-2016 AY555_RS08520 f8680677ec3b7b8e74202f3e1a7d7c78 400 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 32 394 4.0E-97 T 14-09-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 AY555_RS08520 f8680677ec3b7b8e74202f3e1a7d7c78 400 SMART SM00471 66 225 1.3E-11 T 14-09-2016 IPR003607 HD/PDEase domain AY555_RS08520 f8680677ec3b7b8e74202f3e1a7d7c78 400 Pfam PF01966 HD domain 70 184 1.1E-15 T 14-09-2016 IPR006674 HD domain AY555_RS08520 f8680677ec3b7b8e74202f3e1a7d7c78 400 Pfam PF13286 Phosphohydrolase-associated domain 302 392 4.2E-28 T 14-09-2016 IPR026875 Phosphohydrolase-associated domain AY555_RS03785 35c14ffb0c05c099899bf2fe7c7d5416 528 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 10 528 43.981 T 14-09-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AY555_RS03785 35c14ffb0c05c099899bf2fe7c7d5416 528 SMART SM00798 141 453 1.3E-198 T 14-09-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AY555_RS03785 35c14ffb0c05c099899bf2fe7c7d5416 528 PANTHER PTHR11692:SF2 9 528 4.6E-297 T 14-09-2016 AY555_RS03785 35c14ffb0c05c099899bf2fe7c7d5416 528 SUPERFAMILY SSF52335 10 202 4.58E-67 T 14-09-2016 IPR011607 Methylglyoxal synthase-like domain AY555_RS03785 35c14ffb0c05c099899bf2fe7c7d5416 528 SMART SM00851 22 136 1.2E-53 T 14-09-2016 IPR011607 Methylglyoxal synthase-like domain AY555_RS03785 35c14ffb0c05c099899bf2fe7c7d5416 528 Gene3D G3DSA:3.40.140.20 246 363 1.4E-48 T 14-09-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AY555_RS03785 35c14ffb0c05c099899bf2fe7c7d5416 528 PANTHER PTHR11692 9 528 4.6E-297 T 14-09-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AY555_RS03785 35c14ffb0c05c099899bf2fe7c7d5416 528 Pfam PF01808 AICARFT/IMPCHase bienzyme 141 450 4.4E-117 T 14-09-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AY555_RS03785 35c14ffb0c05c099899bf2fe7c7d5416 528 SUPERFAMILY SSF53927 216 528 7.82E-126 T 14-09-2016 IPR016193 Cytidine deaminase-like GO:0003824 AY555_RS03785 35c14ffb0c05c099899bf2fe7c7d5416 528 Pfam PF02142 MGS-like domain 22 135 2.8E-24 T 14-09-2016 IPR011607 Methylglyoxal synthase-like domain AY555_RS03785 35c14ffb0c05c099899bf2fe7c7d5416 528 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 11 528 8.1E-210 T 14-09-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AY555_RS03785 35c14ffb0c05c099899bf2fe7c7d5416 528 Gene3D G3DSA:3.40.140.20 370 518 1.4E-53 T 14-09-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AY555_RS03785 35c14ffb0c05c099899bf2fe7c7d5416 528 Gene3D G3DSA:3.40.50.1380 8 194 3.8E-81 T 14-09-2016 IPR011607 Methylglyoxal synthase-like domain AY555_RS03785 35c14ffb0c05c099899bf2fe7c7d5416 528 PIRSF PIRSF000414 6 528 2.7E-211 T 14-09-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AY555_RS03775 857c4b2d2d7565ee2dfed553792a2ac1 319 PANTHER PTHR10120 1 300 8.0E-105 T 14-09-2016 AY555_RS03775 857c4b2d2d7565ee2dfed553792a2ac1 319 Hamap MF_00188 Protease HtpX [htpX]. 3 281 27.92 T 14-09-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 AY555_RS03775 857c4b2d2d7565ee2dfed553792a2ac1 319 PANTHER PTHR10120:SF19 1 300 8.0E-105 T 14-09-2016 AY555_RS03775 857c4b2d2d7565ee2dfed553792a2ac1 319 Gene3D G3DSA:3.30.2010.10 56 146 1.4E-34 T 14-09-2016 AY555_RS03775 857c4b2d2d7565ee2dfed553792a2ac1 319 Pfam PF01435 Peptidase family M48 71 281 6.8E-39 T 14-09-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AY555_RS08920 d88d0125d75414a13f5d32935b4635cf 198 PRINTS PR00097 Anthranilate synthase component II signature 75 86 2.1E-34 T 14-09-2016 AY555_RS08920 d88d0125d75414a13f5d32935b4635cf 198 PRINTS PR00097 Anthranilate synthase component II signature 120 132 2.1E-34 T 14-09-2016 AY555_RS08920 d88d0125d75414a13f5d32935b4635cf 198 PRINTS PR00097 Anthranilate synthase component II signature 3 17 2.1E-34 T 14-09-2016 AY555_RS08920 d88d0125d75414a13f5d32935b4635cf 198 PRINTS PR00097 Anthranilate synthase component II signature 48 57 2.1E-34 T 14-09-2016 AY555_RS08920 d88d0125d75414a13f5d32935b4635cf 198 PRINTS PR00097 Anthranilate synthase component II signature 100 108 2.1E-34 T 14-09-2016 AY555_RS08920 d88d0125d75414a13f5d32935b4635cf 198 PRINTS PR00097 Anthranilate synthase component II signature 165 178 2.1E-34 T 14-09-2016 AY555_RS08920 d88d0125d75414a13f5d32935b4635cf 198 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 3 187 1.1E-72 T 14-09-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AY555_RS08920 d88d0125d75414a13f5d32935b4635cf 198 PANTHER PTHR11922:SF7 1 192 5.8E-90 T 14-09-2016 AY555_RS08920 d88d0125d75414a13f5d32935b4635cf 198 Pfam PF00117 Glutamine amidotransferase class-I 4 186 9.1E-56 T 14-09-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 AY555_RS08920 d88d0125d75414a13f5d32935b4635cf 198 Gene3D G3DSA:3.40.50.880 3 188 8.1E-70 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AY555_RS08920 d88d0125d75414a13f5d32935b4635cf 198 PANTHER PTHR11922 1 192 5.8E-90 T 14-09-2016 AY555_RS08920 d88d0125d75414a13f5d32935b4635cf 198 PRINTS PR00096 Glutamine amidotransferase superfamily signature 48 57 4.9E-14 T 14-09-2016 AY555_RS08920 d88d0125d75414a13f5d32935b4635cf 198 PRINTS PR00096 Glutamine amidotransferase superfamily signature 75 86 4.9E-14 T 14-09-2016 AY555_RS08920 d88d0125d75414a13f5d32935b4635cf 198 PRINTS PR00096 Glutamine amidotransferase superfamily signature 165 178 4.9E-14 T 14-09-2016 AY555_RS08920 d88d0125d75414a13f5d32935b4635cf 198 SUPERFAMILY SSF52317 3 189 1.55E-59 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AY555_RS02430 04891ad40941511ec66c925589b78098 602 Gene3D G3DSA:1.10.10.10 338 510 2.1E-54 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS02430 04891ad40941511ec66c925589b78098 602 SMART SM00490 243 324 3.5E-24 T 14-09-2016 IPR001650 Helicase, C-terminal AY555_RS02430 04891ad40941511ec66c925589b78098 602 PANTHER PTHR13710:SF81 6 597 3.4E-267 T 14-09-2016 AY555_RS02430 04891ad40941511ec66c925589b78098 602 Gene3D G3DSA:3.40.50.300 6 186 6.8E-55 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS02430 04891ad40941511ec66c925589b78098 602 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 7 592 1.6E-236 T 14-09-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 AY555_RS02430 04891ad40941511ec66c925589b78098 602 SMART SM00487 14 210 1.9E-32 T 14-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AY555_RS02430 04891ad40941511ec66c925589b78098 602 Pfam PF00271 Helicase conserved C-terminal domain 218 324 1.3E-13 T 14-09-2016 IPR001650 Helicase, C-terminal AY555_RS02430 04891ad40941511ec66c925589b78098 602 Pfam PF00270 DEAD/DEAH box helicase 21 177 4.3E-17 T 14-09-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AY555_RS02430 04891ad40941511ec66c925589b78098 602 Gene3D G3DSA:1.10.150.80 525 596 1.2E-17 T 14-09-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 AY555_RS02430 04891ad40941511ec66c925589b78098 602 SUPERFAMILY SSF52540 200 450 2.54E-61 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS02430 04891ad40941511ec66c925589b78098 602 SUPERFAMILY SSF52540 5 186 6.23E-45 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS02430 04891ad40941511ec66c925589b78098 602 Gene3D G3DSA:3.40.50.300 199 337 1.1E-47 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS02430 04891ad40941511ec66c925589b78098 602 Pfam PF09382 RQC domain 400 511 1.8E-32 T 14-09-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 AY555_RS02430 04891ad40941511ec66c925589b78098 602 SUPERFAMILY SSF47819 522 597 8.72E-22 T 14-09-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 AY555_RS02430 04891ad40941511ec66c925589b78098 602 SMART SM00341 522 602 6.5E-12 T 14-09-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 AY555_RS02430 04891ad40941511ec66c925589b78098 602 Pfam PF16124 RecQ zinc-binding 336 397 1.3E-17 T 14-09-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain AY555_RS02430 04891ad40941511ec66c925589b78098 602 SMART SM00956 404 507 5.5E-43 T 14-09-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 AY555_RS02430 04891ad40941511ec66c925589b78098 602 PANTHER PTHR13710 6 597 3.4E-267 T 14-09-2016 AY555_RS02430 04891ad40941511ec66c925589b78098 602 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 8 455 1.8E-156 T 14-09-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 AY555_RS02430 04891ad40941511ec66c925589b78098 602 Pfam PF00570 HRDC domain 528 592 6.7E-21 T 14-09-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 AY555_RS09310 8e09ece032796c5a7cb72445a142baee 718 Gene3D G3DSA:3.30.70.270 534 702 6.0E-50 T 14-09-2016 AY555_RS09310 8e09ece032796c5a7cb72445a142baee 718 SUPERFAMILY SSF55785 276 397 5.15E-21 T 14-09-2016 IPR000014 PAS domain AY555_RS09310 8e09ece032796c5a7cb72445a142baee 718 SMART SM00091 407 472 6.6E-7 T 14-09-2016 IPR000014 PAS domain AY555_RS09310 8e09ece032796c5a7cb72445a142baee 718 SMART SM00091 283 350 2.2E-8 T 14-09-2016 IPR000014 PAS domain AY555_RS09310 8e09ece032796c5a7cb72445a142baee 718 SMART SM00091 143 209 2.2E-5 T 14-09-2016 IPR000014 PAS domain AY555_RS09310 8e09ece032796c5a7cb72445a142baee 718 PANTHER PTHR10799:SF774 450 694 5.7E-35 T 14-09-2016 AY555_RS09310 8e09ece032796c5a7cb72445a142baee 718 Gene3D G3DSA:3.30.450.20 278 396 4.6E-21 T 14-09-2016 AY555_RS09310 8e09ece032796c5a7cb72445a142baee 718 Gene3D G3DSA:3.30.450.20 143 251 7.4E-17 T 14-09-2016 AY555_RS09310 8e09ece032796c5a7cb72445a142baee 718 SUPERFAMILY SSF55785 418 528 5.23E-20 T 14-09-2016 IPR000014 PAS domain AY555_RS09310 8e09ece032796c5a7cb72445a142baee 718 Gene3D G3DSA:3.30.450.20 397 519 3.2E-18 T 14-09-2016 AY555_RS09310 8e09ece032796c5a7cb72445a142baee 718 SMART SM00267 521 699 1.3E-51 T 14-09-2016 IPR000160 GGDEF domain AY555_RS09310 8e09ece032796c5a7cb72445a142baee 718 PANTHER PTHR10799 450 694 5.7E-35 T 14-09-2016 AY555_RS09310 8e09ece032796c5a7cb72445a142baee 718 SUPERFAMILY SSF55785 154 259 1.3E-17 T 14-09-2016 IPR000014 PAS domain AY555_RS09310 8e09ece032796c5a7cb72445a142baee 718 Pfam PF13426 PAS domain 154 252 5.2E-10 T 14-09-2016 IPR000014 PAS domain AY555_RS09310 8e09ece032796c5a7cb72445a142baee 718 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 287 406 6.5E-17 T 14-09-2016 IPR000014 PAS domain AY555_RS09310 8e09ece032796c5a7cb72445a142baee 718 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 143 259 5.5E-11 T 14-09-2016 IPR000014 PAS domain AY555_RS09310 8e09ece032796c5a7cb72445a142baee 718 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 412 527 4.9E-14 T 14-09-2016 IPR000014 PAS domain AY555_RS09310 8e09ece032796c5a7cb72445a142baee 718 Pfam PF00990 Diguanylate cyclase, GGDEF domain 532 694 9.1E-43 T 14-09-2016 IPR000160 GGDEF domain AY555_RS09310 8e09ece032796c5a7cb72445a142baee 718 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 529 696 5.2E-40 T 14-09-2016 IPR000160 GGDEF domain AY555_RS09310 8e09ece032796c5a7cb72445a142baee 718 Pfam PF00989 PAS fold 412 518 9.3E-12 T 14-09-2016 IPR013767 PAS fold GO:0006355 AY555_RS09310 8e09ece032796c5a7cb72445a142baee 718 Pfam PF00989 PAS fold 285 396 8.8E-13 T 14-09-2016 IPR013767 PAS fold GO:0006355 AY555_RS09310 8e09ece032796c5a7cb72445a142baee 718 SMART SM00086 358 399 0.0034 T 14-09-2016 IPR001610 PAC motif AY555_RS09310 8e09ece032796c5a7cb72445a142baee 718 SMART SM00086 213 253 0.051 T 14-09-2016 IPR001610 PAC motif AY555_RS09310 8e09ece032796c5a7cb72445a142baee 718 SMART SM00086 479 521 6.5 T 14-09-2016 IPR001610 PAC motif AY555_RS09310 8e09ece032796c5a7cb72445a142baee 718 SUPERFAMILY SSF55073 537 700 1.44E-43 T 14-09-2016 IPR029787 Nucleotide cyclase AY555_RS08685 bb57026e3e11d86ba50e1cb01feb22ad 565 Pfam PF12706 Beta-lactamase superfamily domain 64 180 2.8E-12 T 14-09-2016 IPR001279 Metallo-beta-lactamase AY555_RS08685 bb57026e3e11d86ba50e1cb01feb22ad 565 PANTHER PTHR11203 11 500 1.1E-165 T 14-09-2016 AY555_RS08685 bb57026e3e11d86ba50e1cb01feb22ad 565 SMART SM00849 32 227 1.5E-16 T 14-09-2016 IPR001279 Metallo-beta-lactamase AY555_RS08685 bb57026e3e11d86ba50e1cb01feb22ad 565 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 372 414 2.3E-8 T 14-09-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain AY555_RS08685 bb57026e3e11d86ba50e1cb01feb22ad 565 SUPERFAMILY SSF56281 22 433 4.82E-81 T 14-09-2016 IPR001279 Metallo-beta-lactamase AY555_RS08685 bb57026e3e11d86ba50e1cb01feb22ad 565 PANTHER PTHR11203:SF22 11 500 1.1E-165 T 14-09-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 AY555_RS08685 bb57026e3e11d86ba50e1cb01feb22ad 565 Gene3D G3DSA:3.60.15.10 17 267 5.3E-66 T 14-09-2016 IPR001279 Metallo-beta-lactamase AY555_RS02255 053574d330bb4667d0bab310f680b9b0 597 SMART SM00382 55 202 1.0E-10 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS02255 053574d330bb4667d0bab310f680b9b0 597 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 21 381 1.5E-123 T 14-09-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 AY555_RS02255 053574d330bb4667d0bab310f680b9b0 597 SUPERFAMILY SSF48019 266 391 6.89E-28 T 14-09-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 AY555_RS02255 053574d330bb4667d0bab310f680b9b0 597 Gene3D G3DSA:3.40.50.300 33 189 1.6E-62 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS02255 053574d330bb4667d0bab310f680b9b0 597 PANTHER PTHR11669:SF0 8 438 6.2E-161 T 14-09-2016 AY555_RS02255 053574d330bb4667d0bab310f680b9b0 597 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 256 396 4.0E-46 T 14-09-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 AY555_RS02255 053574d330bb4667d0bab310f680b9b0 597 Gene3D G3DSA:1.10.8.60 190 265 3.1E-29 T 14-09-2016 AY555_RS02255 053574d330bb4667d0bab310f680b9b0 597 PANTHER PTHR11669 8 438 6.2E-161 T 14-09-2016 AY555_RS02255 053574d330bb4667d0bab310f680b9b0 597 Pfam PF13177 DNA polymerase III, delta subunit 39 201 4.3E-35 T 14-09-2016 AY555_RS02255 053574d330bb4667d0bab310f680b9b0 597 Pfam PF12362 DNA polymerase III gamma and tau subunits C terminal 471 577 1.2E-31 T 14-09-2016 IPR022107 DNA polymerase III, subunit gamma/ tau, C-terminal AY555_RS02255 053574d330bb4667d0bab310f680b9b0 597 SUPERFAMILY SSF52540 50 244 7.1E-53 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS02255 053574d330bb4667d0bab310f680b9b0 597 Gene3D G3DSA:1.20.272.10 266 383 1.7E-22 T 14-09-2016 AY555_RS05375 adf976e61035aa4a69a6ba9f2a1b2994 619 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 214 330 1.1E-36 T 14-09-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 AY555_RS05375 adf976e61035aa4a69a6ba9f2a1b2994 619 SMART SM00853 433 576 1.0E-57 T 14-09-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 AY555_RS05375 adf976e61035aa4a69a6ba9f2a1b2994 619 SUPERFAMILY SSF55874 1 202 7.2E-53 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS05375 adf976e61035aa4a69a6ba9f2a1b2994 619 SUPERFAMILY SSF118116 429 618 3.53E-60 T 14-09-2016 AY555_RS05375 adf976e61035aa4a69a6ba9f2a1b2994 619 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 616 28.195 T 14-09-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 AY555_RS05375 adf976e61035aa4a69a6ba9f2a1b2994 619 SUPERFAMILY SSF54211 206 331 6.45E-36 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AY555_RS05375 adf976e61035aa4a69a6ba9f2a1b2994 619 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 92 98 - T 14-09-2016 IPR014762 DNA mismatch repair, conserved site AY555_RS05375 adf976e61035aa4a69a6ba9f2a1b2994 619 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 124 5.8E-10 T 14-09-2016 AY555_RS05375 adf976e61035aa4a69a6ba9f2a1b2994 619 PANTHER PTHR10073 3 619 2.8E-153 T 14-09-2016 AY555_RS05375 adf976e61035aa4a69a6ba9f2a1b2994 619 SMART SM01340 213 331 2.0E-57 T 14-09-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 AY555_RS05375 adf976e61035aa4a69a6ba9f2a1b2994 619 Gene3D G3DSA:3.30.565.10 1 203 2.5E-69 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS05375 adf976e61035aa4a69a6ba9f2a1b2994 619 Pfam PF08676 MutL C terminal dimerisation domain 429 576 3.3E-51 T 14-09-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 AY555_RS05375 adf976e61035aa4a69a6ba9f2a1b2994 619 Gene3D G3DSA:3.30.230.10 205 330 1.8E-34 T 14-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AY555_RS05375 adf976e61035aa4a69a6ba9f2a1b2994 619 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 311 1.8E-86 T 14-09-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 AY555_RS04615 495723dad2720469df0460bfc46224f8 606 Gene3D G3DSA:2.40.30.10 205 302 1.9E-23 T 14-09-2016 AY555_RS04615 495723dad2720469df0460bfc46224f8 606 SUPERFAMILY SSF54980 398 510 4.89E-24 T 14-09-2016 IPR009022 Elongation factor G, III-V domain AY555_RS04615 495723dad2720469df0460bfc46224f8 606 PANTHER PTHR23115 2 592 1.2E-269 T 14-09-2016 AY555_RS04615 495723dad2720469df0460bfc46224f8 606 Gene3D G3DSA:3.30.70.240 400 481 4.2E-30 T 14-09-2016 IPR000640 Translation elongation factor EFG, V domain AY555_RS04615 495723dad2720469df0460bfc46224f8 606 Pfam PF00679 Elongation factor G C-terminus 397 478 3.3E-19 T 14-09-2016 IPR000640 Translation elongation factor EFG, V domain AY555_RS04615 495723dad2720469df0460bfc46224f8 606 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 3 598 1.9E-282 T 14-09-2016 IPR006298 GTP-binding protein TypA GO:0005525 AY555_RS04615 495723dad2720469df0460bfc46224f8 606 Gene3D G3DSA:3.30.70.870 303 399 2.0E-35 T 14-09-2016 AY555_RS04615 495723dad2720469df0460bfc46224f8 606 Pfam PF00009 Elongation factor Tu GTP binding domain 3 194 3.9E-53 T 14-09-2016 AY555_RS04615 495723dad2720469df0460bfc46224f8 606 Pfam PF03144 Elongation factor Tu domain 2 218 289 2.3E-8 T 14-09-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 AY555_RS04615 495723dad2720469df0460bfc46224f8 606 SUPERFAMILY SSF54980 302 387 6.12E-12 T 14-09-2016 IPR009022 Elongation factor G, III-V domain AY555_RS04615 495723dad2720469df0460bfc46224f8 606 Gene3D G3DSA:3.40.50.300 3 204 3.4E-61 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04615 495723dad2720469df0460bfc46224f8 606 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 14-09-2016 IPR031157 Tr-type G domain, conserved site AY555_RS04615 495723dad2720469df0460bfc46224f8 606 Gene3D G3DSA:2.40.50.250 482 576 1.0E-39 T 14-09-2016 AY555_RS04615 495723dad2720469df0460bfc46224f8 606 PRINTS PR00315 GTP-binding elongation factor signature 85 96 3.6E-15 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AY555_RS04615 495723dad2720469df0460bfc46224f8 606 PRINTS PR00315 GTP-binding elongation factor signature 49 57 3.6E-15 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AY555_RS04615 495723dad2720469df0460bfc46224f8 606 PRINTS PR00315 GTP-binding elongation factor signature 121 130 3.6E-15 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AY555_RS04615 495723dad2720469df0460bfc46224f8 606 PRINTS PR00315 GTP-binding elongation factor signature 69 79 3.6E-15 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AY555_RS04615 495723dad2720469df0460bfc46224f8 606 PRINTS PR00315 GTP-binding elongation factor signature 5 18 3.6E-15 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AY555_RS04615 495723dad2720469df0460bfc46224f8 606 SUPERFAMILY SSF50447 180 297 3.53E-26 T 14-09-2016 IPR009000 Translation protein, beta-barrel domain AY555_RS04615 495723dad2720469df0460bfc46224f8 606 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 141 2.5E-20 T 14-09-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AY555_RS04615 495723dad2720469df0460bfc46224f8 606 PANTHER PTHR23115:SF14 2 592 1.2E-269 T 14-09-2016 IPR006298 GTP-binding protein TypA GO:0005525 AY555_RS04615 495723dad2720469df0460bfc46224f8 606 SUPERFAMILY SSF52540 3 205 2.87E-53 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS01945 68940b1c862e75e2e195e9626787242e 330 PANTHER PTHR23342 38 307 3.7E-38 T 14-09-2016 AY555_RS01945 68940b1c862e75e2e195e9626787242e 330 SUPERFAMILY SSF53633 41 308 6.81E-50 T 14-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AY555_RS01945 68940b1c862e75e2e195e9626787242e 330 Pfam PF00696 Amino acid kinase family 50 283 2.7E-31 T 14-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AY555_RS01945 68940b1c862e75e2e195e9626787242e 330 Gene3D G3DSA:3.40.1160.10 48 306 1.7E-56 T 14-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AY555_RS04140 4df3dd92d4344866d0afe85d7117651c 1166 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 464 2.6E-52 T 14-09-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 AY555_RS04140 4df3dd92d4344866d0afe85d7117651c 1166 Gene3D G3DSA:3.40.50.300 778 912 6.4E-43 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04140 4df3dd92d4344866d0afe85d7117651c 1166 Gene3D G3DSA:3.40.50.300 488 622 6.4E-43 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04140 4df3dd92d4344866d0afe85d7117651c 1166 Gene3D G3DSA:3.40.50.300 356 469 1.7E-61 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04140 4df3dd92d4344866d0afe85d7117651c 1166 Gene3D G3DSA:3.40.50.300 121 183 1.7E-61 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04140 4df3dd92d4344866d0afe85d7117651c 1166 Gene3D G3DSA:3.40.50.300 14 70 1.7E-61 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04140 4df3dd92d4344866d0afe85d7117651c 1166 TIGRFAM TIGR02784 addA_alphas: double-strand break repair helicase AddA 10 1147 0.0 T 14-09-2016 IPR014151 DNA helicase, AddA type AY555_RS04140 4df3dd92d4344866d0afe85d7117651c 1166 SUPERFAMILY SSF52540 113 166 1.52E-109 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04140 4df3dd92d4344866d0afe85d7117651c 1166 SUPERFAMILY SSF52540 21 74 1.52E-109 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04140 4df3dd92d4344866d0afe85d7117651c 1166 SUPERFAMILY SSF52540 542 828 1.52E-109 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04140 4df3dd92d4344866d0afe85d7117651c 1166 SUPERFAMILY SSF52540 346 512 1.52E-109 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04140 4df3dd92d4344866d0afe85d7117651c 1166 SUPERFAMILY SSF52540 860 887 1.52E-109 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04140 4df3dd92d4344866d0afe85d7117651c 1166 PANTHER PTHR11070 10 83 3.7E-87 T 14-09-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 AY555_RS04140 4df3dd92d4344866d0afe85d7117651c 1166 PANTHER PTHR11070 113 197 3.7E-87 T 14-09-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 AY555_RS04140 4df3dd92d4344866d0afe85d7117651c 1166 PANTHER PTHR11070 859 895 3.7E-87 T 14-09-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 AY555_RS04140 4df3dd92d4344866d0afe85d7117651c 1166 PANTHER PTHR11070 321 750 3.7E-87 T 14-09-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 AY555_RS04140 4df3dd92d4344866d0afe85d7117651c 1166 PANTHER PTHR11070 767 827 3.7E-87 T 14-09-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 AY555_RS04140 4df3dd92d4344866d0afe85d7117651c 1166 SUPERFAMILY SSF52980 977 1130 6.97E-10 T 14-09-2016 IPR011335 Restriction endonuclease type II-like AY555_RS04140 4df3dd92d4344866d0afe85d7117651c 1166 Pfam PF12705 PD-(D/E)XK nuclease superfamily 991 1130 1.9E-8 T 14-09-2016 AY555_RS04140 4df3dd92d4344866d0afe85d7117651c 1166 Gene3D G3DSA:1.10.486.10 631 768 2.3E-13 T 14-09-2016 AY555_RS04140 4df3dd92d4344866d0afe85d7117651c 1166 Pfam PF13361 UvrD-like helicase C-terminal domain 776 880 1.0E-12 T 14-09-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AY555_RS03185 667485344332dbb678c9137a58fd5286 285 PRINTS PR00313 NodO calcium binding signature 74 82 4.8E-7 T 14-09-2016 AY555_RS03185 667485344332dbb678c9137a58fd5286 285 PRINTS PR00313 NodO calcium binding signature 53 64 4.8E-7 T 14-09-2016 AY555_RS03185 667485344332dbb678c9137a58fd5286 285 PRINTS PR00313 NodO calcium binding signature 92 100 4.8E-7 T 14-09-2016 AY555_RS03185 667485344332dbb678c9137a58fd5286 285 Gene3D G3DSA:2.150.10.10 53 181 7.2E-10 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS03185 667485344332dbb678c9137a58fd5286 285 SUPERFAMILY SSF51120 53 184 8.76E-11 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS04300 2f2b774d83f2753450840331653783c2 760 Gene3D G3DSA:3.90.70.10 61 151 5.2E-8 T 14-09-2016 AY555_RS04300 2f2b774d83f2753450840331653783c2 760 Pfam PF00664 ABC transporter transmembrane region 196 457 8.7E-21 T 14-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AY555_RS04300 2f2b774d83f2753450840331653783c2 760 SMART SM00382 538 732 5.5E-16 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS04300 2f2b774d83f2753450840331653783c2 760 PANTHER PTHR24221 169 726 3.5E-88 T 14-09-2016 AY555_RS04300 2f2b774d83f2753450840331653783c2 760 Gene3D G3DSA:1.20.1560.10 184 497 8.3E-46 T 14-09-2016 AY555_RS04300 2f2b774d83f2753450840331653783c2 760 Pfam PF00005 ABC transporter 531 677 7.4E-23 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AY555_RS04300 2f2b774d83f2753450840331653783c2 760 SUPERFAMILY SSF90123 184 497 4.32E-47 T 14-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AY555_RS04300 2f2b774d83f2753450840331653783c2 760 Gene3D G3DSA:3.40.50.300 512 735 1.0E-53 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04300 2f2b774d83f2753450840331653783c2 760 SUPERFAMILY SSF52540 506 735 4.83E-52 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS05210 0f7277942acd0fed51d953feb84a2ced 215 PANTHER PTHR11649 37 215 5.6E-54 T 14-09-2016 AY555_RS05210 0f7277942acd0fed51d953feb84a2ced 215 SUPERFAMILY SSF52540 37 211 5.82E-36 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS05210 0f7277942acd0fed51d953feb84a2ced 215 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 29 213 25.391 T 14-09-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 AY555_RS05210 0f7277942acd0fed51d953feb84a2ced 215 Gene3D G3DSA:3.40.50.300 34 213 1.3E-41 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS05210 0f7277942acd0fed51d953feb84a2ced 215 Pfam PF01926 50S ribosome-binding GTPase 43 161 1.1E-20 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AY555_RS05210 0f7277942acd0fed51d953feb84a2ced 215 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 25 209 3.5E-67 T 14-09-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 AY555_RS08020 83bdc00ddb291ac6924ca97f3e1b311c 739 Gene3D G3DSA:3.30.1360.40 239 335 2.6E-31 T 14-09-2016 IPR024946 Arginine repressor C-terminal-like domain AY555_RS08020 83bdc00ddb291ac6924ca97f3e1b311c 739 SMART SM00434 13 465 7.9E-237 T 14-09-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS08020 83bdc00ddb291ac6924ca97f3e1b311c 739 Gene3D G3DSA:2.120.10.90 504 704 9.1E-27 T 14-09-2016 AY555_RS08020 83bdc00ddb291ac6924ca97f3e1b311c 739 PANTHER PTHR10169 505 574 9.2E-204 T 14-09-2016 AY555_RS08020 83bdc00ddb291ac6924ca97f3e1b311c 739 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 13 739 2.1E-266 T 14-09-2016 AY555_RS08020 83bdc00ddb291ac6924ca97f3e1b311c 739 SUPERFAMILY SSF56719 32 484 3.66E-158 T 14-09-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 AY555_RS08020 83bdc00ddb291ac6924ca97f3e1b311c 739 Gene3D G3DSA:3.90.199.10 32 238 6.8E-107 T 14-09-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 AY555_RS08020 83bdc00ddb291ac6924ca97f3e1b311c 739 Gene3D G3DSA:3.90.199.10 337 402 6.8E-107 T 14-09-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 AY555_RS08020 83bdc00ddb291ac6924ca97f3e1b311c 739 PANTHER PTHR10169 1 482 9.2E-204 T 14-09-2016 AY555_RS08020 83bdc00ddb291ac6924ca97f3e1b311c 739 PANTHER PTHR10169:SF48 1 482 9.2E-204 T 14-09-2016 AY555_RS08020 83bdc00ddb291ac6924ca97f3e1b311c 739 PANTHER PTHR10169:SF48 505 574 9.2E-204 T 14-09-2016 AY555_RS08020 83bdc00ddb291ac6924ca97f3e1b311c 739 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 605 632 4.0E-4 T 14-09-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AY555_RS08020 83bdc00ddb291ac6924ca97f3e1b311c 739 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 651 688 0.0016 T 14-09-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AY555_RS08020 83bdc00ddb291ac6924ca97f3e1b311c 739 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 6 739 32.438 T 14-09-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AY555_RS08020 83bdc00ddb291ac6924ca97f3e1b311c 739 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 34 460 3.7E-141 T 14-09-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS08020 83bdc00ddb291ac6924ca97f3e1b311c 739 SUPERFAMILY SSF101904 510 737 9.29E-47 T 14-09-2016 AY555_RS08080 a5d635b53e8140e78235553a3bb3f9a3 334 TIGRFAM TIGR03182 PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 18 331 4.3E-151 T 14-09-2016 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y GO:0004739|GO:0006086|GO:0043231 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AY555_RS08080 a5d635b53e8140e78235553a3bb3f9a3 334 SUPERFAMILY SSF52518 10 332 1.59E-105 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AY555_RS08080 a5d635b53e8140e78235553a3bb3f9a3 334 PANTHER PTHR11516:SF40 18 330 4.7E-170 T 14-09-2016 AY555_RS08080 a5d635b53e8140e78235553a3bb3f9a3 334 PANTHER PTHR11516 18 330 4.7E-170 T 14-09-2016 AY555_RS08080 a5d635b53e8140e78235553a3bb3f9a3 334 Gene3D G3DSA:3.40.50.970 10 331 1.7E-134 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AY555_RS08080 a5d635b53e8140e78235553a3bb3f9a3 334 Pfam PF00676 Dehydrogenase E1 component 25 323 6.8E-102 T 14-09-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 AY555_RS02635 cccca8e6018a7975ad14f2a00d80f0a8 431 Gene3D G3DSA:3.40.50.720 233 431 1.5E-44 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS02635 cccca8e6018a7975ad14f2a00d80f0a8 431 SUPERFAMILY SSF48179 202 293 6.63E-25 T 14-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AY555_RS02635 cccca8e6018a7975ad14f2a00d80f0a8 431 SMART SM00984 318 418 2.5E-30 T 14-09-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 AY555_RS02635 cccca8e6018a7975ad14f2a00d80f0a8 431 SUPERFAMILY SSF52413 303 429 3.4E-28 T 14-09-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 AY555_RS02635 cccca8e6018a7975ad14f2a00d80f0a8 431 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 9 180 5.6E-30 T 14-09-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 AY555_RS02635 cccca8e6018a7975ad14f2a00d80f0a8 431 PIRSF PIRSF000124 7 431 8.6E-57 T 14-09-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 AY555_RS02635 cccca8e6018a7975ad14f2a00d80f0a8 431 Gene3D G3DSA:3.40.50.720 6 223 4.1E-54 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS02635 cccca8e6018a7975ad14f2a00d80f0a8 431 PANTHER PTHR11374 4 431 6.6E-231 T 14-09-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 AY555_RS02635 cccca8e6018a7975ad14f2a00d80f0a8 431 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 203 291 6.5E-23 T 14-09-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 AY555_RS02635 cccca8e6018a7975ad14f2a00d80f0a8 431 PANTHER PTHR11374:SF25 4 431 6.6E-231 T 14-09-2016 AY555_RS02635 cccca8e6018a7975ad14f2a00d80f0a8 431 SUPERFAMILY SSF51735 9 191 8.93E-43 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS02635 cccca8e6018a7975ad14f2a00d80f0a8 431 PIRSF PIRSF500136 1 431 4.1E-143 T 14-09-2016 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 AY555_RS02635 cccca8e6018a7975ad14f2a00d80f0a8 431 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 9 404 5.2E-114 T 14-09-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 AY555_RS02635 cccca8e6018a7975ad14f2a00d80f0a8 431 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 319 417 3.0E-21 T 14-09-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 AY555_RS05410 ca3c4d462992cc06a07c0bd00cc7419f 320 PIRSF PIRSF002849 1 318 4.2E-114 T 14-09-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted AY555_RS05410 ca3c4d462992cc06a07c0bd00cc7419f 320 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 34 167 1.2E-59 T 14-09-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 AY555_RS05410 ca3c4d462992cc06a07c0bd00cc7419f 320 Gene3D G3DSA:1.10.8.300 197 311 3.1E-29 T 14-09-2016 AY555_RS05410 ca3c4d462992cc06a07c0bd00cc7419f 320 PANTHER PTHR11603 2 307 3.1E-111 T 14-09-2016 AY555_RS05410 ca3c4d462992cc06a07c0bd00cc7419f 320 SUPERFAMILY SSF52540 244 289 4.4E-39 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS05410 ca3c4d462992cc06a07c0bd00cc7419f 320 SUPERFAMILY SSF52540 4 210 4.4E-39 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS05410 ca3c4d462992cc06a07c0bd00cc7419f 320 PANTHER PTHR11603:SF156 2 307 3.1E-111 T 14-09-2016 AY555_RS05410 ca3c4d462992cc06a07c0bd00cc7419f 320 Gene3D G3DSA:3.40.50.300 16 183 2.4E-40 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04210 3253f97cb30067545a6b35950b2dbe07 190 PANTHER PTHR22935:SF81 1 174 3.8E-45 T 14-09-2016 AY555_RS04210 3253f97cb30067545a6b35950b2dbe07 190 Hamap MF_01924 D-alanyl-D-alanine dipeptidase [ddpX]. 1 176 26.308 T 14-09-2016 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 AY555_RS04210 3253f97cb30067545a6b35950b2dbe07 190 PANTHER PTHR22935 1 174 3.8E-45 T 14-09-2016 AY555_RS04210 3253f97cb30067545a6b35950b2dbe07 190 Pfam PF01427 D-ala-D-ala dipeptidase 10 177 1.3E-33 T 14-09-2016 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 AY555_RS04210 3253f97cb30067545a6b35950b2dbe07 190 Gene3D G3DSA:3.30.1380.10 2 165 5.4E-53 T 14-09-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain AY555_RS04210 3253f97cb30067545a6b35950b2dbe07 190 PIRSF PIRSF026671 4 181 1.8E-45 T 14-09-2016 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 AY555_RS04210 3253f97cb30067545a6b35950b2dbe07 190 SUPERFAMILY SSF55166 10 170 1.05E-51 T 14-09-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain AY555_RS05495 f881b76313bb07b1ebb1a9ac0e31811f 298 PANTHER PTHR30579 1 295 2.9E-107 T 14-09-2016 AY555_RS05495 f881b76313bb07b1ebb1a9ac0e31811f 298 Gene3D G3DSA:1.10.10.10 2 84 1.8E-18 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS05495 f881b76313bb07b1ebb1a9ac0e31811f 298 Gene3D G3DSA:3.40.190.10 185 260 1.4E-4 T 14-09-2016 AY555_RS05495 f881b76313bb07b1ebb1a9ac0e31811f 298 Gene3D G3DSA:3.40.190.10 93 184 2.9E-41 T 14-09-2016 AY555_RS05495 f881b76313bb07b1ebb1a9ac0e31811f 298 SUPERFAMILY SSF53850 94 292 4.71E-21 T 14-09-2016 AY555_RS05495 f881b76313bb07b1ebb1a9ac0e31811f 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.9E-5 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AY555_RS05495 f881b76313bb07b1ebb1a9ac0e31811f 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.9E-5 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AY555_RS05495 f881b76313bb07b1ebb1a9ac0e31811f 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.9E-5 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AY555_RS05495 f881b76313bb07b1ebb1a9ac0e31811f 298 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 2 294 1.9E-118 T 14-09-2016 IPR017685 HTH-type transcriptional regulator ArgP AY555_RS05495 f881b76313bb07b1ebb1a9ac0e31811f 298 PANTHER PTHR30579:SF2 1 295 2.9E-107 T 14-09-2016 AY555_RS05495 f881b76313bb07b1ebb1a9ac0e31811f 298 SUPERFAMILY SSF46785 2 108 6.66E-16 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS05495 f881b76313bb07b1ebb1a9ac0e31811f 298 Pfam PF03466 LysR substrate binding domain 97 290 9.7E-16 T 14-09-2016 IPR005119 LysR, substrate-binding AY555_RS05495 f881b76313bb07b1ebb1a9ac0e31811f 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 6.7E-15 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AY555_RS08730 b3513da11d93dbf72dc7b679583e40e0 338 PANTHER PTHR11432:SF3 8 337 2.4E-183 T 14-09-2016 AY555_RS08730 b3513da11d93dbf72dc7b679583e40e0 338 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 57 72 - T 14-09-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 AY555_RS08730 b3513da11d93dbf72dc7b679583e40e0 338 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 11 332 25.364 T 14-09-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 AY555_RS08730 b3513da11d93dbf72dc7b679583e40e0 338 PANTHER PTHR11432 8 337 2.4E-183 T 14-09-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 AY555_RS08730 b3513da11d93dbf72dc7b679583e40e0 338 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 213 226 - T 14-09-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 AY555_RS08730 b3513da11d93dbf72dc7b679583e40e0 338 Pfam PF00146 NADH dehydrogenase 19 326 4.9E-130 T 14-09-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 AY555_RS04215 74bec0c594b4cfa110a93b18e00cdc6d 237 SUPERFAMILY SSF53067 1 101 7.34E-25 T 14-09-2016 AY555_RS04215 74bec0c594b4cfa110a93b18e00cdc6d 237 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 216 1.7E-43 T 14-09-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 AY555_RS04215 74bec0c594b4cfa110a93b18e00cdc6d 237 PANTHER PTHR11735:SF11 1 134 1.2E-29 T 14-09-2016 AY555_RS04215 74bec0c594b4cfa110a93b18e00cdc6d 237 SUPERFAMILY SSF53067 111 205 9.58E-5 T 14-09-2016 AY555_RS04215 74bec0c594b4cfa110a93b18e00cdc6d 237 Gene3D G3DSA:3.30.420.40 121 173 6.2E-4 T 14-09-2016 AY555_RS04215 74bec0c594b4cfa110a93b18e00cdc6d 237 Gene3D G3DSA:3.30.420.40 1 120 5.1E-32 T 14-09-2016 AY555_RS04215 74bec0c594b4cfa110a93b18e00cdc6d 237 PANTHER PTHR11735 1 134 1.2E-29 T 14-09-2016 AY555_RS04215 74bec0c594b4cfa110a93b18e00cdc6d 237 Pfam PF00814 Glycoprotease family 34 127 1.2E-17 T 14-09-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AY555_RS01250 c43d90b84dbf409c006cb16586f5ec80 395 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 391 3.6E-135 T 14-09-2016 IPR002155 Thiolase GO:0008152|GO:0016747 AY555_RS01250 c43d90b84dbf409c006cb16586f5ec80 395 PANTHER PTHR18919:SF95 1 394 1.1E-192 T 14-09-2016 AY555_RS01250 c43d90b84dbf409c006cb16586f5ec80 395 PANTHER PTHR18919 1 394 1.1E-192 T 14-09-2016 AY555_RS01250 c43d90b84dbf409c006cb16586f5ec80 395 Gene3D G3DSA:3.40.47.10 144 194 3.7E-63 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AY555_RS01250 c43d90b84dbf409c006cb16586f5ec80 395 Gene3D G3DSA:3.40.47.10 277 392 3.7E-63 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AY555_RS01250 c43d90b84dbf409c006cb16586f5ec80 395 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 14-09-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 AY555_RS01250 c43d90b84dbf409c006cb16586f5ec80 395 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 14-09-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AY555_RS01250 c43d90b84dbf409c006cb16586f5ec80 395 SUPERFAMILY SSF53901 271 392 3.57E-43 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AY555_RS01250 c43d90b84dbf409c006cb16586f5ec80 395 Gene3D G3DSA:3.40.47.10 4 125 6.0E-65 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AY555_RS01250 c43d90b84dbf409c006cb16586f5ec80 395 Gene3D G3DSA:3.40.47.10 195 276 6.0E-65 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AY555_RS01250 c43d90b84dbf409c006cb16586f5ec80 395 Pfam PF02803 Thiolase, C-terminal domain 271 392 5.4E-45 T 14-09-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AY555_RS01250 c43d90b84dbf409c006cb16586f5ec80 395 Pfam PF00108 Thiolase, N-terminal domain 5 262 1.9E-85 T 14-09-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AY555_RS01250 c43d90b84dbf409c006cb16586f5ec80 395 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 14-09-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AY555_RS01250 c43d90b84dbf409c006cb16586f5ec80 395 SUPERFAMILY SSF53901 5 269 9.76E-81 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AY555_RS01250 c43d90b84dbf409c006cb16586f5ec80 395 PIRSF PIRSF000429 1 394 3.3E-124 T 14-09-2016 IPR002155 Thiolase GO:0008152|GO:0016747 AY555_RS06260 6331397a9fbb08de971100cf35ca8fee 368 PANTHER PTHR11601 1 358 3.0E-120 T 14-09-2016 AY555_RS06260 6331397a9fbb08de971100cf35ca8fee 368 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 183 202 - T 14-09-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AY555_RS06260 6331397a9fbb08de971100cf35ca8fee 368 PANTHER PTHR11601:SF20 1 358 3.0E-120 T 14-09-2016 AY555_RS06260 6331397a9fbb08de971100cf35ca8fee 368 PIRSF PIRSF005572 3 368 4.7E-120 T 14-09-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AY555_RS06260 6331397a9fbb08de971100cf35ca8fee 368 Gene3D G3DSA:3.90.1150.10 237 360 1.0E-38 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AY555_RS06260 6331397a9fbb08de971100cf35ca8fee 368 SUPERFAMILY SSF53383 5 361 3.32E-90 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AY555_RS06260 6331397a9fbb08de971100cf35ca8fee 368 Gene3D G3DSA:3.40.640.10 18 236 4.4E-69 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AY555_RS06260 6331397a9fbb08de971100cf35ca8fee 368 Pfam PF00266 Aminotransferase class-V 6 356 9.9E-71 T 14-09-2016 IPR000192 Aminotransferase class V domain AY555_RS03580 5aee3aa968fb0e49dd890397c70d44fc 222 SUPERFAMILY SSF48317 10 220 2.88E-34 T 14-09-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AY555_RS03580 5aee3aa968fb0e49dd890397c70d44fc 222 SMART SM00014 103 212 1.5E-10 T 14-09-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AY555_RS03580 5aee3aa968fb0e49dd890397c70d44fc 222 Pfam PF01569 PAP2 superfamily 107 219 3.3E-22 T 14-09-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AY555_RS03580 5aee3aa968fb0e49dd890397c70d44fc 222 PANTHER PTHR14969 31 77 2.1E-14 T 14-09-2016 AY555_RS03580 5aee3aa968fb0e49dd890397c70d44fc 222 PANTHER PTHR14969 96 216 2.1E-14 T 14-09-2016 AY555_RS03580 5aee3aa968fb0e49dd890397c70d44fc 222 Gene3D G3DSA:1.20.144.10 42 218 1.9E-29 T 14-09-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AY555_RS06620 4a1c18f7377ff5d642eb1db3a14b65b1 433 Gene3D G3DSA:3.65.10.10 21 234 1.6E-62 T 14-09-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 AY555_RS06620 4a1c18f7377ff5d642eb1db3a14b65b1 433 Gene3D G3DSA:3.65.10.10 235 430 1.1E-54 T 14-09-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 AY555_RS06620 4a1c18f7377ff5d642eb1db3a14b65b1 433 PANTHER PTHR21090 1 433 6.4E-172 T 14-09-2016 AY555_RS06620 4a1c18f7377ff5d642eb1db3a14b65b1 433 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 421 1.3E-92 T 14-09-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 AY555_RS06620 4a1c18f7377ff5d642eb1db3a14b65b1 433 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 431 45.69 T 14-09-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AY555_RS06620 4a1c18f7377ff5d642eb1db3a14b65b1 433 SUPERFAMILY SSF55205 1 431 1.54E-132 T 14-09-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AY555_RS06620 4a1c18f7377ff5d642eb1db3a14b65b1 433 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 430 5.1E-170 T 14-09-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AY555_RS08810 f089f951a085b2904dd75028bb3dd36c 745 SUPERFAMILY SSF48435 123 573 1.09E-64 T 14-09-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 AY555_RS08810 f089f951a085b2904dd75028bb3dd36c 745 Gene3D G3DSA:1.25.20.10 127 488 6.0E-30 T 14-09-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 AY555_RS08810 f089f951a085b2904dd75028bb3dd36c 745 PANTHER PTHR21666 593 739 2.6E-40 T 14-09-2016 AY555_RS08810 f089f951a085b2904dd75028bb3dd36c 745 SUPERFAMILY SSF53955 592 735 7.5E-43 T 14-09-2016 IPR023346 Lysozyme-like domain AY555_RS08810 f089f951a085b2904dd75028bb3dd36c 745 Pfam PF01464 Transglycosylase SLT domain 591 696 7.6E-26 T 14-09-2016 IPR008258 Transglycosylase SLT domain 1 AY555_RS08810 f089f951a085b2904dd75028bb3dd36c 745 Gene3D G3DSA:1.10.530.10 592 735 1.7E-44 T 14-09-2016 AY555_RS07265 3060744d76155bbfd0295839de0220a1 264 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 9.6E-17 T 14-09-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AY555_RS07265 3060744d76155bbfd0295839de0220a1 264 PANTHER PTHR30363 1 249 7.9E-101 T 14-09-2016 AY555_RS07265 3060744d76155bbfd0295839de0220a1 264 Pfam PF00455 DeoR C terminal sensor domain 75 232 1.4E-50 T 14-09-2016 IPR014036 DeoR C-terminal sensor domain AY555_RS07265 3060744d76155bbfd0295839de0220a1 264 SMART SM01134 72 233 8.9E-68 T 14-09-2016 AY555_RS07265 3060744d76155bbfd0295839de0220a1 264 SUPERFAMILY SSF46785 4 66 4.61E-12 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS07265 3060744d76155bbfd0295839de0220a1 264 PANTHER PTHR30363:SF1 1 249 7.9E-101 T 14-09-2016 AY555_RS07265 3060744d76155bbfd0295839de0220a1 264 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 8.9E-11 T 14-09-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AY555_RS07265 3060744d76155bbfd0295839de0220a1 264 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 8.9E-11 T 14-09-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AY555_RS07265 3060744d76155bbfd0295839de0220a1 264 Gene3D G3DSA:1.10.10.10 5 57 1.8E-8 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS07265 3060744d76155bbfd0295839de0220a1 264 Gene3D G3DSA:3.30.750.70 75 176 2.9E-13 T 14-09-2016 AY555_RS07265 3060744d76155bbfd0295839de0220a1 264 SUPERFAMILY SSF100950 75 232 4.83E-25 T 14-09-2016 AY555_RS07265 3060744d76155bbfd0295839de0220a1 264 SMART SM00420 6 58 1.8E-17 T 14-09-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AY555_RS00410 2cb87999d804ed76c0cd4619c6e3e446 752 SUPERFAMILY SSF51998 10 751 3.07E-275 T 14-09-2016 AY555_RS00410 2cb87999d804ed76c0cd4619c6e3e446 752 ProSitePatterns PS00850 Glycine radical domain signature. 722 730 - T 14-09-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AY555_RS00410 2cb87999d804ed76c0cd4619c6e3e446 752 PANTHER PTHR30191 1 752 0.0 T 14-09-2016 AY555_RS00410 2cb87999d804ed76c0cd4619c6e3e446 752 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 14 752 0.0 T 14-09-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 AY555_RS00410 2cb87999d804ed76c0cd4619c6e3e446 752 PIRSF PIRSF000379 11 752 0.0 T 14-09-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 AY555_RS00410 2cb87999d804ed76c0cd4619c6e3e446 752 PANTHER PTHR30191:SF0 1 752 0.0 T 14-09-2016 AY555_RS00410 2cb87999d804ed76c0cd4619c6e3e446 752 Gene3D G3DSA:3.20.70.20 8 751 5.5E-297 T 14-09-2016 AY555_RS00410 2cb87999d804ed76c0cd4619c6e3e446 752 Pfam PF01228 Glycine radical 627 733 1.4E-42 T 14-09-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 AY555_RS00410 2cb87999d804ed76c0cd4619c6e3e446 752 Pfam PF02901 Pyruvate formate lyase-like 27 611 3.1E-206 T 14-09-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 AY555_RS08960 18a46ec99a894e0803d803d1f29e5b47 526 SUPERFAMILY SSF54980 391 464 1.01E-13 T 14-09-2016 IPR009022 Elongation factor G, III-V domain AY555_RS08960 18a46ec99a894e0803d803d1f29e5b47 526 SUPERFAMILY SSF52540 8 275 9.24E-85 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08960 18a46ec99a894e0803d803d1f29e5b47 526 Pfam PF00009 Elongation factor Tu GTP binding domain 11 272 1.4E-50 T 14-09-2016 AY555_RS08960 18a46ec99a894e0803d803d1f29e5b47 526 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 160 1.2E-23 T 14-09-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AY555_RS08960 18a46ec99a894e0803d803d1f29e5b47 526 Gene3D G3DSA:2.40.30.10 293 392 4.6E-18 T 14-09-2016 AY555_RS08960 18a46ec99a894e0803d803d1f29e5b47 526 PANTHER PTHR23115 249 491 1.7E-212 T 14-09-2016 AY555_RS08960 18a46ec99a894e0803d803d1f29e5b47 526 PANTHER PTHR23115:SF69 249 491 1.7E-212 T 14-09-2016 AY555_RS08960 18a46ec99a894e0803d803d1f29e5b47 526 PRINTS PR00315 GTP-binding elongation factor signature 63 71 2.7E-11 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AY555_RS08960 18a46ec99a894e0803d803d1f29e5b47 526 PRINTS PR00315 GTP-binding elongation factor signature 135 144 2.7E-11 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AY555_RS08960 18a46ec99a894e0803d803d1f29e5b47 526 PRINTS PR00315 GTP-binding elongation factor signature 83 93 2.7E-11 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AY555_RS08960 18a46ec99a894e0803d803d1f29e5b47 526 PRINTS PR00315 GTP-binding elongation factor signature 99 110 2.7E-11 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AY555_RS08960 18a46ec99a894e0803d803d1f29e5b47 526 PRINTS PR00315 GTP-binding elongation factor signature 13 26 2.7E-11 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AY555_RS08960 18a46ec99a894e0803d803d1f29e5b47 526 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 56 71 - T 14-09-2016 IPR031157 Tr-type G domain, conserved site AY555_RS08960 18a46ec99a894e0803d803d1f29e5b47 526 PANTHER PTHR23115 1 182 1.7E-212 T 14-09-2016 AY555_RS08960 18a46ec99a894e0803d803d1f29e5b47 526 PANTHER PTHR23115:SF69 1 182 1.7E-212 T 14-09-2016 AY555_RS08960 18a46ec99a894e0803d803d1f29e5b47 526 Pfam PF16658 Class II release factor RF3, C-terminal domain 385 512 5.5E-42 T 14-09-2016 IPR032090 Peptide chain release factor 3, C-terminal AY555_RS08960 18a46ec99a894e0803d803d1f29e5b47 526 Gene3D G3DSA:3.30.70.870 393 462 1.1E-10 T 14-09-2016 AY555_RS08960 18a46ec99a894e0803d803d1f29e5b47 526 Gene3D G3DSA:3.40.50.300 8 279 1.1E-65 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08960 18a46ec99a894e0803d803d1f29e5b47 526 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 2 525 50.432 T 14-09-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 AY555_RS08960 18a46ec99a894e0803d803d1f29e5b47 526 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 1 525 4.9E-207 T 14-09-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 AY555_RS08960 18a46ec99a894e0803d803d1f29e5b47 526 SUPERFAMILY SSF50447 259 391 6.06E-24 T 14-09-2016 IPR009000 Translation protein, beta-barrel domain AY555_RS09480 912361bce3bbd53ef6813ccabdb3430b 430 SUPERFAMILY SSF55347 139 304 1.5E-50 T 14-09-2016 AY555_RS09480 912361bce3bbd53ef6813ccabdb3430b 430 Pfam PF01842 ACT domain 350 412 9.1E-7 T 14-09-2016 IPR002912 ACT domain GO:0008152|GO:0016597 AY555_RS09480 912361bce3bbd53ef6813ccabdb3430b 430 Gene3D G3DSA:3.30.360.10 151 300 1.9E-53 T 14-09-2016 AY555_RS09480 912361bce3bbd53ef6813ccabdb3430b 430 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 185 207 - T 14-09-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 AY555_RS09480 912361bce3bbd53ef6813ccabdb3430b 430 SUPERFAMILY SSF51735 4 160 5.72E-30 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS09480 912361bce3bbd53ef6813ccabdb3430b 430 Gene3D G3DSA:3.40.50.720 4 150 9.9E-43 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS09480 912361bce3bbd53ef6813ccabdb3430b 430 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 11 127 2.4E-12 T 14-09-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AY555_RS09480 912361bce3bbd53ef6813ccabdb3430b 430 SUPERFAMILY SSF55021 348 416 1.7E-9 T 14-09-2016 AY555_RS09480 912361bce3bbd53ef6813ccabdb3430b 430 Gene3D G3DSA:3.30.70.260 350 420 6.4E-7 T 14-09-2016 AY555_RS09480 912361bce3bbd53ef6813ccabdb3430b 430 PANTHER PTHR21499:SF2 3 370 3.4E-116 T 14-09-2016 AY555_RS09480 912361bce3bbd53ef6813ccabdb3430b 430 Pfam PF00742 Homoserine dehydrogenase 139 317 4.1E-62 T 14-09-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 AY555_RS09480 912361bce3bbd53ef6813ccabdb3430b 430 PANTHER PTHR21499 3 370 3.4E-116 T 14-09-2016 AY555_RS09480 912361bce3bbd53ef6813ccabdb3430b 430 PIRSF PIRSF000098 2 429 5.8E-149 T 14-09-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 AY555_RS04935 6edd894d1e81d6547ae6acd525aae198 291 Pfam PF13624 SurA N-terminal domain 12 107 6.6E-7 T 14-09-2016 AY555_RS04935 6edd894d1e81d6547ae6acd525aae198 291 PANTHER PTHR10657:SF11 6 282 1.5E-44 T 14-09-2016 AY555_RS04935 6edd894d1e81d6547ae6acd525aae198 291 SUPERFAMILY SSF54534 119 240 2.68E-29 T 14-09-2016 AY555_RS04935 6edd894d1e81d6547ae6acd525aae198 291 Pfam PF13616 PPIC-type PPIASE domain 150 243 5.8E-22 T 14-09-2016 AY555_RS04935 6edd894d1e81d6547ae6acd525aae198 291 PANTHER PTHR10657 6 282 1.5E-44 T 14-09-2016 AY555_RS04935 6edd894d1e81d6547ae6acd525aae198 291 Gene3D G3DSA:3.10.50.40 150 264 3.1E-41 T 14-09-2016 AY555_RS04970 05d4f5d552321c28f4703f2b6771499b 375 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 24 363 3.3E-48 T 14-09-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AY555_RS04970 05d4f5d552321c28f4703f2b6771499b 375 PIRSF PIRSF000390 3 372 5.6E-53 T 14-09-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AY555_RS04970 05d4f5d552321c28f4703f2b6771499b 375 PANTHER PTHR30244 1 371 1.2E-47 T 14-09-2016 AY555_RS04970 05d4f5d552321c28f4703f2b6771499b 375 Gene3D G3DSA:3.40.640.10 24 247 2.0E-34 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AY555_RS04970 05d4f5d552321c28f4703f2b6771499b 375 SUPERFAMILY SSF53383 24 363 5.25E-52 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AY555_RS04970 05d4f5d552321c28f4703f2b6771499b 375 PANTHER PTHR30244:SF9 1 371 1.2E-47 T 14-09-2016 AY555_RS04970 05d4f5d552321c28f4703f2b6771499b 375 Gene3D G3DSA:3.90.1150.10 248 367 4.8E-10 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AY555_RS02815 90a3d614db9139c5efc4115e5a49cf23 410 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 38 380 1.8E-72 T 14-09-2016 IPR006427 Phage portal protein, HK97 AY555_RS02815 90a3d614db9139c5efc4115e5a49cf23 410 Pfam PF04860 Phage portal protein 44 374 1.7E-90 T 14-09-2016 IPR006944 Bacteriophage/Gene transfer agent portal protein AY555_RS08565 3ee85b13cd38730f999bc6382c463dc8 279 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 182 244 1.0E-7 T 14-09-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AY555_RS08565 3ee85b13cd38730f999bc6382c463dc8 279 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 40 113 1.0E-24 T 14-09-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AY555_RS08565 3ee85b13cd38730f999bc6382c463dc8 279 TIGRFAM TIGR00444 mazG: MazG family protein 23 275 2.1E-94 T 14-09-2016 IPR011551 NTP pyrophosphohydrolase MazG AY555_RS08565 3ee85b13cd38730f999bc6382c463dc8 279 SUPERFAMILY SSF101386 155 253 1.31E-22 T 14-09-2016 AY555_RS08565 3ee85b13cd38730f999bc6382c463dc8 279 Gene3D G3DSA:1.10.287.1080 23 85 1.2E-6 T 14-09-2016 AY555_RS08565 3ee85b13cd38730f999bc6382c463dc8 279 Gene3D G3DSA:1.10.287.1080 150 238 7.7E-12 T 14-09-2016 AY555_RS08565 3ee85b13cd38730f999bc6382c463dc8 279 PANTHER PTHR30522 17 279 2.2E-109 T 14-09-2016 AY555_RS08565 3ee85b13cd38730f999bc6382c463dc8 279 PANTHER PTHR30522:SF0 17 279 2.2E-109 T 14-09-2016 IPR011551 NTP pyrophosphohydrolase MazG AY555_RS08565 3ee85b13cd38730f999bc6382c463dc8 279 SUPERFAMILY SSF101386 16 116 1.37E-21 T 14-09-2016 AY555_RS00920 bd9ca589a65ac3cd86b9243fed746eb9 79 PRINTS PR00973 Ribosomal protein S17 family signature 54 64 1.1E-12 T 14-09-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00920 bd9ca589a65ac3cd86b9243fed746eb9 79 PRINTS PR00973 Ribosomal protein S17 family signature 22 45 1.1E-12 T 14-09-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00920 bd9ca589a65ac3cd86b9243fed746eb9 79 PRINTS PR00973 Ribosomal protein S17 family signature 64 71 1.1E-12 T 14-09-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00920 bd9ca589a65ac3cd86b9243fed746eb9 79 Pfam PF00366 Ribosomal protein S17 8 73 6.4E-33 T 14-09-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00920 bd9ca589a65ac3cd86b9243fed746eb9 79 PANTHER PTHR10744 1 71 6.2E-34 T 14-09-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00920 bd9ca589a65ac3cd86b9243fed746eb9 79 ProSitePatterns PS00056 Ribosomal protein S17 signature. 54 66 - T 14-09-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00920 bd9ca589a65ac3cd86b9243fed746eb9 79 SUPERFAMILY SSF50249 3 74 5.57E-31 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS00920 bd9ca589a65ac3cd86b9243fed746eb9 79 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 73 7.0E-23 T 14-09-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00920 bd9ca589a65ac3cd86b9243fed746eb9 79 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 1 79 23.847 T 14-09-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00920 bd9ca589a65ac3cd86b9243fed746eb9 79 Gene3D G3DSA:2.40.50.140 3 74 4.8E-34 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS00920 bd9ca589a65ac3cd86b9243fed746eb9 79 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 3 73 1.9E-37 T 14-09-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS10800 158e40bc93729490d87fa026586dae64 190 Gene3D G3DSA:1.20.140.10 140 189 3.2E-16 T 14-09-2016 AY555_RS10800 158e40bc93729490d87fa026586dae64 190 Gene3D G3DSA:2.40.110.10 44 139 2.9E-39 T 14-09-2016 AY555_RS10800 158e40bc93729490d87fa026586dae64 190 SUPERFAMILY SSF56645 2 165 7.07E-58 T 14-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AY555_RS10800 158e40bc93729490d87fa026586dae64 190 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 2 40 9.5E-7 T 14-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AY555_RS10800 158e40bc93729490d87fa026586dae64 190 PANTHER PTHR10909 3 188 2.2E-79 T 14-09-2016 AY555_RS10800 158e40bc93729490d87fa026586dae64 190 PANTHER PTHR10909:SF10 3 188 2.2E-79 T 14-09-2016 AY555_RS10800 158e40bc93729490d87fa026586dae64 190 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 45 139 1.8E-26 T 14-09-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AY555_RS10800 158e40bc93729490d87fa026586dae64 190 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 47 59 - T 14-09-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AY555_RS10800 158e40bc93729490d87fa026586dae64 190 Gene3D G3DSA:1.10.540.10 2 42 2.4E-9 T 14-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AY555_RS10800 158e40bc93729490d87fa026586dae64 190 SUPERFAMILY SSF47203 156 189 1.81E-6 T 14-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AY555_RS10800 158e40bc93729490d87fa026586dae64 190 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 152 188 5.7E-5 T 14-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AY555_RS06080 48f6e088fb0be0827c4f74fd56e3574e 472 Gene3D G3DSA:3.90.226.10 290 458 1.4E-21 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AY555_RS06080 48f6e088fb0be0827c4f74fd56e3574e 472 Pfam PF03572 Peptidase family S41 293 442 5.8E-18 T 14-09-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 AY555_RS06080 48f6e088fb0be0827c4f74fd56e3574e 472 SMART SM00245 239 445 1.1E-5 T 14-09-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 AY555_RS06080 48f6e088fb0be0827c4f74fd56e3574e 472 SUPERFAMILY SSF52096 293 456 1.31E-23 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AY555_RS06775 dbe9ba927c22f5e9ef97b8c297de7841 320 PANTHER PTHR18964 6 302 8.5E-43 T 14-09-2016 AY555_RS06775 dbe9ba927c22f5e9ef97b8c297de7841 320 PANTHER PTHR18964:SF123 6 302 8.5E-43 T 14-09-2016 AY555_RS06775 dbe9ba927c22f5e9ef97b8c297de7841 320 SUPERFAMILY SSF53067 5 302 2.2E-39 T 14-09-2016 AY555_RS06775 dbe9ba927c22f5e9ef97b8c297de7841 320 Pfam PF00480 ROK family 6 302 2.1E-45 T 14-09-2016 IPR000600 ROK family AY555_RS06775 dbe9ba927c22f5e9ef97b8c297de7841 320 Gene3D G3DSA:3.30.420.40 144 281 1.4E-36 T 14-09-2016 AY555_RS06775 dbe9ba927c22f5e9ef97b8c297de7841 320 Gene3D G3DSA:3.30.420.40 6 143 6.1E-22 T 14-09-2016 AY555_RS05365 d84ed98483d561620337dba6c2afa2e1 459 SUPERFAMILY SSF63411 36 263 2.17E-43 T 14-09-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AY555_RS05365 d84ed98483d561620337dba6c2afa2e1 459 PANTHER PTHR11851 51 452 4.5E-58 T 14-09-2016 AY555_RS05365 d84ed98483d561620337dba6c2afa2e1 459 SUPERFAMILY SSF63411 266 454 1.1E-45 T 14-09-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AY555_RS05365 d84ed98483d561620337dba6c2afa2e1 459 Gene3D G3DSA:3.30.830.10 268 448 4.4E-36 T 14-09-2016 IPR011237 Peptidase M16 domain GO:0046872 AY555_RS05365 d84ed98483d561620337dba6c2afa2e1 459 PANTHER PTHR11851:SF140 51 452 4.5E-58 T 14-09-2016 AY555_RS05365 d84ed98483d561620337dba6c2afa2e1 459 Gene3D G3DSA:3.30.830.10 46 253 1.1E-36 T 14-09-2016 IPR011237 Peptidase M16 domain GO:0046872 AY555_RS05365 d84ed98483d561620337dba6c2afa2e1 459 Pfam PF00675 Insulinase (Peptidase family M16) 56 163 7.9E-6 T 14-09-2016 IPR011765 Peptidase M16, N-terminal AY555_RS05365 d84ed98483d561620337dba6c2afa2e1 459 Pfam PF05193 Peptidase M16 inactive domain 209 383 3.6E-26 T 14-09-2016 IPR007863 Peptidase M16, C-terminal AY555_RS06335 0f2bd688134eb8a812f9ff596cb4107a 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 2.4E-6 T 14-09-2016 AY555_RS06335 0f2bd688134eb8a812f9ff596cb4107a 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 348 370 2.4E-6 T 14-09-2016 AY555_RS06335 0f2bd688134eb8a812f9ff596cb4107a 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 154 172 2.4E-6 T 14-09-2016 AY555_RS06335 0f2bd688134eb8a812f9ff596cb4107a 395 Gene3D G3DSA:3.50.50.60 1 188 2.1E-48 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS06335 0f2bd688134eb8a812f9ff596cb4107a 395 Gene3D G3DSA:3.50.50.60 340 393 2.1E-48 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS06335 0f2bd688134eb8a812f9ff596cb4107a 395 SUPERFAMILY SSF51905 1 190 4.97E-57 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS06335 0f2bd688134eb8a812f9ff596cb4107a 395 SUPERFAMILY SSF51905 338 394 4.97E-57 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS06335 0f2bd688134eb8a812f9ff596cb4107a 395 PANTHER PTHR10617:SF103 331 393 2.3E-100 T 14-09-2016 AY555_RS06335 0f2bd688134eb8a812f9ff596cb4107a 395 PANTHER PTHR10617:SF103 1 287 2.3E-100 T 14-09-2016 AY555_RS06335 0f2bd688134eb8a812f9ff596cb4107a 395 Gene3D G3DSA:1.10.8.260 271 323 7.6E-13 T 14-09-2016 IPR023166 HI0933 insert-like domain AY555_RS06335 0f2bd688134eb8a812f9ff596cb4107a 395 Pfam PF03486 HI0933-like protein 4 393 2.0E-133 T 14-09-2016 AY555_RS06335 0f2bd688134eb8a812f9ff596cb4107a 395 Gene3D G3DSA:2.40.30.10 190 270 3.9E-26 T 14-09-2016 AY555_RS06335 0f2bd688134eb8a812f9ff596cb4107a 395 PANTHER PTHR10617 331 393 2.3E-100 T 14-09-2016 AY555_RS06335 0f2bd688134eb8a812f9ff596cb4107a 395 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 5 392 4.4E-115 T 14-09-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like AY555_RS06335 0f2bd688134eb8a812f9ff596cb4107a 395 PANTHER PTHR10617 1 287 2.3E-100 T 14-09-2016 AY555_RS06335 0f2bd688134eb8a812f9ff596cb4107a 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 3.7E-9 T 14-09-2016 AY555_RS06335 0f2bd688134eb8a812f9ff596cb4107a 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 363 370 3.7E-9 T 14-09-2016 AY555_RS06335 0f2bd688134eb8a812f9ff596cb4107a 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 157 166 3.7E-9 T 14-09-2016 AY555_RS06335 0f2bd688134eb8a812f9ff596cb4107a 395 SUPERFAMILY SSF160996 192 339 1.19E-40 T 14-09-2016 AY555_RS04635 0a0b239762eb3ebdc3b81a4c7b34932f 583 SUPERFAMILY SSF47384 306 387 9.22E-17 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS04635 0a0b239762eb3ebdc3b81a4c7b34932f 583 SMART SM00388 323 388 4.0E-17 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS04635 0a0b239762eb3ebdc3b81a4c7b34932f 583 PANTHER PTHR24423 261 554 1.8E-60 T 14-09-2016 AY555_RS04635 0a0b239762eb3ebdc3b81a4c7b34932f 583 Pfam PF13755 Sensor N-terminal transmembrane domain 21 85 6.8E-13 T 14-09-2016 IPR025908 Sensor N-terminal transmembrane domain AY555_RS04635 0a0b239762eb3ebdc3b81a4c7b34932f 583 SUPERFAMILY SSF158472 267 320 1.7E-5 T 14-09-2016 AY555_RS04635 0a0b239762eb3ebdc3b81a4c7b34932f 583 SUPERFAMILY SSF55874 378 552 1.14E-33 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS04635 0a0b239762eb3ebdc3b81a4c7b34932f 583 Pfam PF13756 Stimulus-sensing domain 99 205 6.9E-18 T 14-09-2016 IPR025919 Stimulus-sensing domain AY555_RS04635 0a0b239762eb3ebdc3b81a4c7b34932f 583 Gene3D G3DSA:1.10.287.130 313 384 1.5E-14 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS04635 0a0b239762eb3ebdc3b81a4c7b34932f 583 Gene3D G3DSA:3.30.565.10 402 552 5.0E-34 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS04635 0a0b239762eb3ebdc3b81a4c7b34932f 583 PRINTS PR00344 Bacterial sensor protein C-terminal signature 508 526 3.6E-12 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS04635 0a0b239762eb3ebdc3b81a4c7b34932f 583 PRINTS PR00344 Bacterial sensor protein C-terminal signature 537 550 3.6E-12 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS04635 0a0b239762eb3ebdc3b81a4c7b34932f 583 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 487 3.6E-12 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS04635 0a0b239762eb3ebdc3b81a4c7b34932f 583 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 501 3.6E-12 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS04635 0a0b239762eb3ebdc3b81a4c7b34932f 583 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 437 551 4.3E-18 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS04635 0a0b239762eb3ebdc3b81a4c7b34932f 583 SMART SM00387 436 553 5.9E-32 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS04635 0a0b239762eb3ebdc3b81a4c7b34932f 583 Pfam PF00512 His Kinase A (phospho-acceptor) domain 325 387 5.4E-15 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS04635 0a0b239762eb3ebdc3b81a4c7b34932f 583 SMART SM00304 267 322 2.5E-7 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AY555_RS04635 0a0b239762eb3ebdc3b81a4c7b34932f 583 Pfam PF00672 HAMP domain 251 318 8.2E-10 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AY555_RS06210 69bcd9e3abd0a31853059aabc14be8f1 228 PANTHER PTHR30450:SF1 1 228 2.5E-112 T 14-09-2016 AY555_RS06210 69bcd9e3abd0a31853059aabc14be8f1 228 PANTHER PTHR30450 1 228 2.5E-112 T 14-09-2016 AY555_RS06210 69bcd9e3abd0a31853059aabc14be8f1 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 225 1.7E-24 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS06210 69bcd9e3abd0a31853059aabc14be8f1 228 SUPERFAMILY SSF161098 16 209 3.4E-47 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS06210 69bcd9e3abd0a31853059aabc14be8f1 228 Gene3D G3DSA:1.10.3720.10 17 224 6.7E-44 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS02500 166782426857fea40db28c41b713c987 455 PANTHER PTHR30624:SF1 6 455 2.3E-144 T 14-09-2016 AY555_RS02500 166782426857fea40db28c41b713c987 455 Pfam PF01523 Putative modulator of DNA gyrase 36 324 1.9E-56 T 14-09-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AY555_RS02500 166782426857fea40db28c41b713c987 455 SUPERFAMILY SSF111283 13 454 2.49E-127 T 14-09-2016 AY555_RS02500 166782426857fea40db28c41b713c987 455 PANTHER PTHR30624 6 455 2.3E-144 T 14-09-2016 AY555_RS01265 55840c0a241606d76cf08bbc766ca750 671 Pfam PF00140 Sigma-70 factor, region 1.2 107 139 1.0E-13 T 14-09-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AY555_RS01265 55840c0a241606d76cf08bbc766ca750 671 Pfam PF04545 Sigma-70, region 4 606 658 1.8E-17 T 14-09-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AY555_RS01265 55840c0a241606d76cf08bbc766ca750 671 Pfam PF04539 Sigma-70 region 3 516 591 4.3E-30 T 14-09-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AY555_RS01265 55840c0a241606d76cf08bbc766ca750 671 SUPERFAMILY SSF88659 510 583 3.05E-21 T 14-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AY555_RS01265 55840c0a241606d76cf08bbc766ca750 671 Gene3D G3DSA:1.10.10.10 600 670 9.2E-32 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS01265 55840c0a241606d76cf08bbc766ca750 671 PANTHER PTHR30603 5 161 1.6E-226 T 14-09-2016 AY555_RS01265 55840c0a241606d76cf08bbc766ca750 671 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 18 670 43.105 T 14-09-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 AY555_RS01265 55840c0a241606d76cf08bbc766ca750 671 SUPERFAMILY SSF88946 124 187 2.83E-92 T 14-09-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AY555_RS01265 55840c0a241606d76cf08bbc766ca750 671 SUPERFAMILY SSF88946 223 504 2.83E-92 T 14-09-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AY555_RS01265 55840c0a241606d76cf08bbc766ca750 671 SUPERFAMILY SSF88659 567 669 3.18E-26 T 14-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AY555_RS01265 55840c0a241606d76cf08bbc766ca750 671 PANTHER PTHR30603 384 670 1.6E-226 T 14-09-2016 AY555_RS01265 55840c0a241606d76cf08bbc766ca750 671 PANTHER PTHR30603:SF0 384 670 1.6E-226 T 14-09-2016 AY555_RS01265 55840c0a241606d76cf08bbc766ca750 671 PANTHER PTHR30603:SF0 5 161 1.6E-226 T 14-09-2016 AY555_RS01265 55840c0a241606d76cf08bbc766ca750 671 Pfam PF03979 Sigma-70 factor, region 1.1 29 100 2.2E-22 T 14-09-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 AY555_RS01265 55840c0a241606d76cf08bbc766ca750 671 PRINTS PR00046 Major sigma-70 factor signature 485 493 1.3E-30 T 14-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AY555_RS01265 55840c0a241606d76cf08bbc766ca750 671 PRINTS PR00046 Major sigma-70 factor signature 461 474 1.3E-30 T 14-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AY555_RS01265 55840c0a241606d76cf08bbc766ca750 671 PRINTS PR00046 Major sigma-70 factor signature 609 621 1.3E-30 T 14-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AY555_RS01265 55840c0a241606d76cf08bbc766ca750 671 PRINTS PR00046 Major sigma-70 factor signature 630 645 1.3E-30 T 14-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AY555_RS01265 55840c0a241606d76cf08bbc766ca750 671 PRINTS PR00046 Major sigma-70 factor signature 645 656 1.3E-30 T 14-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AY555_RS01265 55840c0a241606d76cf08bbc766ca750 671 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 630 656 - T 14-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AY555_RS01265 55840c0a241606d76cf08bbc766ca750 671 Gene3D G3DSA:1.10.10.10 510 561 1.3E-25 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS01265 55840c0a241606d76cf08bbc766ca750 671 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 461 474 - T 14-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AY555_RS01265 55840c0a241606d76cf08bbc766ca750 671 Gene3D G3DSA:1.10.601.10 230 506 7.7E-119 T 14-09-2016 AY555_RS01265 55840c0a241606d76cf08bbc766ca750 671 Gene3D G3DSA:1.10.601.10 121 193 7.7E-119 T 14-09-2016 AY555_RS01265 55840c0a241606d76cf08bbc766ca750 671 Pfam PF04542 Sigma-70 region 2 437 506 2.0E-21 T 14-09-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AY555_RS01265 55840c0a241606d76cf08bbc766ca750 671 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 433 669 1.6E-120 T 14-09-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 AY555_RS01265 55840c0a241606d76cf08bbc766ca750 671 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 433 658 2.0E-38 T 14-09-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AY555_RS01265 55840c0a241606d76cf08bbc766ca750 671 Pfam PF04546 Sigma-70, non-essential region 149 405 4.7E-45 T 14-09-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AY555_RS04280 3fd59494dfe161b52a6c253ac9cd515d 877 SUPERFAMILY SSF101353 246 459 2.88E-55 T 14-09-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 AY555_RS04280 3fd59494dfe161b52a6c253ac9cd515d 877 SUPERFAMILY SSF50447 453 554 1.19E-18 T 14-09-2016 IPR009000 Translation protein, beta-barrel domain AY555_RS04280 3fd59494dfe161b52a6c253ac9cd515d 877 Pfam PF01411 tRNA synthetases class II (A) 6 557 2.7E-206 T 14-09-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 AY555_RS04280 3fd59494dfe161b52a6c253ac9cd515d 877 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 877 190.803 T 14-09-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 AY555_RS04280 3fd59494dfe161b52a6c253ac9cd515d 877 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 655 698 5.0E-18 T 14-09-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AY555_RS04280 3fd59494dfe161b52a6c253ac9cd515d 877 SUPERFAMILY SSF55186 554 712 8.63E-49 T 14-09-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 AY555_RS04280 3fd59494dfe161b52a6c253ac9cd515d 877 PRINTS PR00980 Alanyl-tRNA synthetase signature 298 311 3.7E-32 T 14-09-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 AY555_RS04280 3fd59494dfe161b52a6c253ac9cd515d 877 PRINTS PR00980 Alanyl-tRNA synthetase signature 75 86 3.7E-32 T 14-09-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 AY555_RS04280 3fd59494dfe161b52a6c253ac9cd515d 877 PRINTS PR00980 Alanyl-tRNA synthetase signature 226 239 3.7E-32 T 14-09-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 AY555_RS04280 3fd59494dfe161b52a6c253ac9cd515d 877 PRINTS PR00980 Alanyl-tRNA synthetase signature 199 210 3.7E-32 T 14-09-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 AY555_RS04280 3fd59494dfe161b52a6c253ac9cd515d 877 PRINTS PR00980 Alanyl-tRNA synthetase signature 274 290 3.7E-32 T 14-09-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 AY555_RS04280 3fd59494dfe161b52a6c253ac9cd515d 877 SMART SM00863 655 698 1.6E-21 T 14-09-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AY555_RS04280 3fd59494dfe161b52a6c253ac9cd515d 877 PANTHER PTHR11777 1 876 0.0 T 14-09-2016 AY555_RS04280 3fd59494dfe161b52a6c253ac9cd515d 877 PANTHER PTHR11777:SF9 1 876 0.0 T 14-09-2016 AY555_RS04280 3fd59494dfe161b52a6c253ac9cd515d 877 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 6 858 2.7E-283 T 14-09-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 AY555_RS04280 3fd59494dfe161b52a6c253ac9cd515d 877 Pfam PF02272 DHHA1 domain 803 872 2.9E-12 T 14-09-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 AY555_RS04280 3fd59494dfe161b52a6c253ac9cd515d 877 Gene3D G3DSA:3.30.930.10 3 242 1.0E-110 T 14-09-2016 AY555_RS04280 3fd59494dfe161b52a6c253ac9cd515d 877 SUPERFAMILY SSF55681 3 245 2.98E-106 T 14-09-2016 AY555_RS00235 dddc90fa5e1e24e40a5afdca0dbe0a64 209 Gene3D G3DSA:3.30.420.10 18 163 7.6E-48 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AY555_RS00235 dddc90fa5e1e24e40a5afdca0dbe0a64 209 SUPERFAMILY SSF53098 17 207 4.55E-66 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AY555_RS00235 dddc90fa5e1e24e40a5afdca0dbe0a64 209 Pfam PF01351 Ribonuclease HII 19 200 2.0E-43 T 14-09-2016 IPR024567 Ribonuclease HII/HIII domain AY555_RS00235 dddc90fa5e1e24e40a5afdca0dbe0a64 209 Hamap MF_00052_B Ribonuclease HII [rnhB]. 17 202 36.97 T 14-09-2016 IPR022898 Ribonuclease HII GO:0004523 AY555_RS00235 dddc90fa5e1e24e40a5afdca0dbe0a64 209 PANTHER PTHR10954 5 200 3.2E-70 T 14-09-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 AY555_RS01550 e9bea84ccdfbf9512ae8294dbe43d5cf 256 PANTHER PTHR24322:SF211 11 30 4.0E-47 T 14-09-2016 AY555_RS01550 e9bea84ccdfbf9512ae8294dbe43d5cf 256 PANTHER PTHR24322:SF211 156 187 4.0E-47 T 14-09-2016 AY555_RS01550 e9bea84ccdfbf9512ae8294dbe43d5cf 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.5E-6 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS01550 e9bea84ccdfbf9512ae8294dbe43d5cf 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.5E-6 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS01550 e9bea84ccdfbf9512ae8294dbe43d5cf 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.5E-6 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS01550 e9bea84ccdfbf9512ae8294dbe43d5cf 256 Gene3D G3DSA:3.40.50.720 8 242 6.9E-61 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS01550 e9bea84ccdfbf9512ae8294dbe43d5cf 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.5E-22 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS01550 e9bea84ccdfbf9512ae8294dbe43d5cf 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 1.5E-22 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS01550 e9bea84ccdfbf9512ae8294dbe43d5cf 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.5E-22 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS01550 e9bea84ccdfbf9512ae8294dbe43d5cf 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.5E-22 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS01550 e9bea84ccdfbf9512ae8294dbe43d5cf 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.5E-22 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS01550 e9bea84ccdfbf9512ae8294dbe43d5cf 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 242 7.5E-41 T 14-09-2016 AY555_RS01550 e9bea84ccdfbf9512ae8294dbe43d5cf 256 PANTHER PTHR24322:SF211 46 140 4.0E-47 T 14-09-2016 AY555_RS01550 e9bea84ccdfbf9512ae8294dbe43d5cf 256 PANTHER PTHR24322 11 30 4.0E-47 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS01550 e9bea84ccdfbf9512ae8294dbe43d5cf 256 PANTHER PTHR24322 156 187 4.0E-47 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS01550 e9bea84ccdfbf9512ae8294dbe43d5cf 256 PANTHER PTHR24322 46 140 4.0E-47 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS01550 e9bea84ccdfbf9512ae8294dbe43d5cf 256 SUPERFAMILY SSF51735 8 243 4.58E-60 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS06520 7bbd56acd16d72f822a625f7cd29699c 304 PANTHER PTHR35862:SF1 4 303 1.1E-98 T 14-09-2016 AY555_RS06520 7bbd56acd16d72f822a625f7cd29699c 304 Pfam PF04865 Baseplate J-like protein 121 263 2.4E-29 T 14-09-2016 IPR006949 Baseplate protein J-like AY555_RS06520 7bbd56acd16d72f822a625f7cd29699c 304 PIRSF PIRSF020481 6 303 7.3E-108 T 14-09-2016 IPR014507 Baseplate assembly protein J, predicted AY555_RS06520 7bbd56acd16d72f822a625f7cd29699c 304 PANTHER PTHR35862 4 303 1.1E-98 T 14-09-2016 AY555_RS04025 1f93c29c2bd5410e2e308c8b4f00d999 311 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 221 2.2E-9 T 14-09-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal AY555_RS04025 1f93c29c2bd5410e2e308c8b4f00d999 311 PANTHER PTHR13767 4 309 1.0E-106 T 14-09-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AY555_RS04025 1f93c29c2bd5410e2e308c8b4f00d999 311 SUPERFAMILY SSF55120 10 222 5.18E-72 T 14-09-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AY555_RS04025 1f93c29c2bd5410e2e308c8b4f00d999 311 PANTHER PTHR13767:SF2 4 309 1.0E-106 T 14-09-2016 AY555_RS04025 1f93c29c2bd5410e2e308c8b4f00d999 311 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 309 17.964 T 14-09-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AY555_RS04025 1f93c29c2bd5410e2e308c8b4f00d999 311 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 11 219 1.9E-63 T 14-09-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AY555_RS04025 1f93c29c2bd5410e2e308c8b4f00d999 311 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 180 2.5E-49 T 14-09-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 AY555_RS06800 85cd624fed2509ae21b8ee4f9435027b 301 SUPERFAMILY SSF48576 10 290 1.3E-83 T 14-09-2016 IPR008949 Isoprenoid synthase domain AY555_RS06800 85cd624fed2509ae21b8ee4f9435027b 301 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 220 232 - T 14-09-2016 IPR000092 Polyprenyl synthetase GO:0008299 AY555_RS06800 85cd624fed2509ae21b8ee4f9435027b 301 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 83 99 - T 14-09-2016 IPR000092 Polyprenyl synthetase GO:0008299 AY555_RS06800 85cd624fed2509ae21b8ee4f9435027b 301 PANTHER PTHR12001 5 286 3.6E-101 T 14-09-2016 IPR017446 Polyprenyl synthetase-related AY555_RS06800 85cd624fed2509ae21b8ee4f9435027b 301 Gene3D G3DSA:1.10.600.10 4 299 7.0E-95 T 14-09-2016 IPR008949 Isoprenoid synthase domain AY555_RS06800 85cd624fed2509ae21b8ee4f9435027b 301 PANTHER PTHR12001:SF23 5 286 3.6E-101 T 14-09-2016 AY555_RS06800 85cd624fed2509ae21b8ee4f9435027b 301 Pfam PF00348 Polyprenyl synthetase 36 273 2.0E-57 T 14-09-2016 IPR000092 Polyprenyl synthetase GO:0008299 AY555_RS05430 b9a9e4ffc2b7d37794114d7827db1aad 443 Pfam PF01743 Poly A polymerase head domain 50 170 3.8E-25 T 14-09-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 AY555_RS05430 b9a9e4ffc2b7d37794114d7827db1aad 443 Gene3D G3DSA:3.30.460.10 32 171 2.6E-40 T 14-09-2016 AY555_RS05430 b9a9e4ffc2b7d37794114d7827db1aad 443 SUPERFAMILY SSF81301 23 167 3.38E-36 T 14-09-2016 AY555_RS05430 b9a9e4ffc2b7d37794114d7827db1aad 443 SUPERFAMILY SSF81891 170 434 6.67E-40 T 14-09-2016 AY555_RS05430 b9a9e4ffc2b7d37794114d7827db1aad 443 Gene3D G3DSA:1.10.3090.10 172 404 8.9E-34 T 14-09-2016 AY555_RS05430 b9a9e4ffc2b7d37794114d7827db1aad 443 PANTHER PTHR13734 33 257 2.1E-61 T 14-09-2016 AY555_RS05430 b9a9e4ffc2b7d37794114d7827db1aad 443 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 208 258 3.4E-9 T 14-09-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain AY555_RS01555 69196f858770360aed00e468e2dcd432 134 Pfam PF02152 Dihydroneopterin aldolase 18 126 4.0E-25 T 14-09-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 AY555_RS01555 69196f858770360aed00e468e2dcd432 134 Gene3D G3DSA:3.30.1130.10 17 127 4.5E-32 T 14-09-2016 AY555_RS01555 69196f858770360aed00e468e2dcd432 134 SMART SM00905 18 127 1.7E-32 T 14-09-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 AY555_RS01555 69196f858770360aed00e468e2dcd432 134 SUPERFAMILY SSF55620 14 127 2.89E-27 T 14-09-2016 AY555_RS01555 69196f858770360aed00e468e2dcd432 134 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 17 125 4.4E-22 T 14-09-2016 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 AY555_RS01555 69196f858770360aed00e468e2dcd432 134 TIGRFAM TIGR00526 folB_dom: FolB domain 17 127 5.1E-19 T 14-09-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 SUPERFAMILY SSF51120 1194 1357 2.7E-34 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1289 1307 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1479 1497 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 926 944 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 SUPERFAMILY SSF51120 204 351 2.09E-22 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 719 736 0.21 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 298 315 0.032 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 271 288 4.2 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 55 71 0.041 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 930 946 0.17 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 493 510 1.0 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1483 1498 0.096 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1283 1300 0.0023 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 512 527 0.63 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1247 1264 0.22 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1464 1481 0.13 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 476 492 0.02 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 36 48 52.0 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 885 901 15.0 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 701 717 0.11 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1211 1228 0.0083 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 683 699 0.0072 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 902 919 0.12 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 666 681 6.6 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 73 89 0.34 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1302 1318 0.067 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1229 1246 6.8E-4 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1265 1282 0.0018 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1194 1210 8.0 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 295 313 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1208 1226 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1244 1262 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1217 1235 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1470 1488 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 SUPERFAMILY SSF51120 658 772 4.45E-25 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 508 526 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 890 908 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 SUPERFAMILY SSF51120 840 986 1.96E-23 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 499 517 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 69 87 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 PRINTS PR00313 NodO calcium binding signature 521 530 2.7E-7 T 14-09-2016 AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 PRINTS PR00313 NodO calcium binding signature 503 511 2.7E-7 T 14-09-2016 AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 PRINTS PR00313 NodO calcium binding signature 512 520 2.7E-7 T 14-09-2016 AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 PRINTS PR00313 NodO calcium binding signature 482 493 2.7E-7 T 14-09-2016 AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 490 508 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 917 935 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 Gene3D G3DSA:2.150.10.10 35 128 2.9E-20 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 Gene3D G3DSA:2.150.10.10 873 985 1.7E-22 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 Gene3D G3DSA:2.150.10.10 205 348 4.1E-19 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 Gene3D G3DSA:2.150.10.10 455 561 4.1E-20 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 Gene3D G3DSA:2.150.10.10 1454 1533 3.5E-15 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 Gene3D G3DSA:2.150.10.10 1192 1351 2.4E-41 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 Gene3D G3DSA:2.150.10.10 662 772 3.9E-24 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 SUPERFAMILY SSF51120 1453 1542 6.8E-17 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 Pfam PF08548 Peptidase M10 serralysin C terminal 265 357 1.4E-4 T 14-09-2016 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1298 1316 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 908 926 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1280 1298 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 SUPERFAMILY SSF51120 34 187 3.4E-24 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 SUPERFAMILY SSF51120 456 571 1.02E-20 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05070 04b32e3fb28c8f0b5854f8a4f62c876f 1595 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1271 1289 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS08310 3f0055ff3d192c73476beadba16ef454 83 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 7 67 4.9E-31 T 14-09-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AY555_RS08310 3f0055ff3d192c73476beadba16ef454 83 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 5 67 27.93 T 14-09-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AY555_RS08310 3f0055ff3d192c73476beadba16ef454 83 Gene3D G3DSA:2.30.30.100 4 77 2.2E-34 T 14-09-2016 AY555_RS08310 3f0055ff3d192c73476beadba16ef454 83 PANTHER PTHR34772:SF1 3 83 3.4E-32 T 14-09-2016 AY555_RS08310 3f0055ff3d192c73476beadba16ef454 83 PANTHER PTHR34772 3 83 3.4E-32 T 14-09-2016 AY555_RS08310 3f0055ff3d192c73476beadba16ef454 83 SUPERFAMILY SSF50182 8 67 1.47E-23 T 14-09-2016 IPR010920 LSM domain AY555_RS08240 07a7fadbc86eb0e121b9cc7d456282e9 248 PANTHER PTHR35092:SF1 4 244 8.2E-46 T 14-09-2016 AY555_RS08240 07a7fadbc86eb0e121b9cc7d456282e9 248 SUPERFAMILY SSF102522 2 135 6.41E-39 T 14-09-2016 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal AY555_RS08240 07a7fadbc86eb0e121b9cc7d456282e9 248 SUPERFAMILY SSF101852 159 243 6.02E-15 T 14-09-2016 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal AY555_RS08240 07a7fadbc86eb0e121b9cc7d456282e9 248 PANTHER PTHR35092 4 244 8.2E-46 T 14-09-2016 AY555_RS08240 07a7fadbc86eb0e121b9cc7d456282e9 248 Pfam PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase 2 241 4.5E-58 T 14-09-2016 IPR002747 SAM-dependent chlorinase/fluorinase AY555_RS08240 07a7fadbc86eb0e121b9cc7d456282e9 248 Gene3D G3DSA:2.40.30.90 161 243 5.3E-16 T 14-09-2016 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal AY555_RS08240 07a7fadbc86eb0e121b9cc7d456282e9 248 PIRSF PIRSF006779 1 245 4.7E-46 T 14-09-2016 IPR002747 SAM-dependent chlorinase/fluorinase AY555_RS06815 f9f6b87638adfe1dba57828d57146fbb 490 PIRSF PIRSF006247 8 490 2.9E-169 T 14-09-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 AY555_RS06815 f9f6b87638adfe1dba57828d57146fbb 490 PANTHER PTHR32024:SF3 10 490 3.0E-190 T 14-09-2016 AY555_RS06815 f9f6b87638adfe1dba57828d57146fbb 490 PANTHER PTHR32024 10 490 3.0E-190 T 14-09-2016 AY555_RS06815 f9f6b87638adfe1dba57828d57146fbb 490 Pfam PF02386 Cation transport protein 48 482 2.7E-57 T 14-09-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 AY555_RS04035 859e62ee310e059b9e156f2b50c37155 710 Gene3D G3DSA:3.30.230.70 3 227 3.1E-88 T 14-09-2016 IPR027408 PNPase/RNase PH domain AY555_RS04035 859e62ee310e059b9e156f2b50c37155 710 Gene3D G3DSA:3.30.230.70 314 542 2.1E-87 T 14-09-2016 IPR027408 PNPase/RNase PH domain AY555_RS04035 859e62ee310e059b9e156f2b50c37155 710 PANTHER PTHR11252:SF0 2 693 0.0 T 14-09-2016 AY555_RS04035 859e62ee310e059b9e156f2b50c37155 710 SUPERFAMILY SSF55666 451 549 7.71E-27 T 14-09-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 AY555_RS04035 859e62ee310e059b9e156f2b50c37155 710 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 249 321 7.8E-15 T 14-09-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AY555_RS04035 859e62ee310e059b9e156f2b50c37155 710 SUPERFAMILY SSF55666 147 237 1.36E-28 T 14-09-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 AY555_RS04035 859e62ee310e059b9e156f2b50c37155 710 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 5 694 30.281 T 14-09-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AY555_RS04035 859e62ee310e059b9e156f2b50c37155 710 Pfam PF00013 KH domain 557 614 2.3E-10 T 14-09-2016 IPR004088 K Homology domain, type 1 GO:0003723 AY555_RS04035 859e62ee310e059b9e156f2b50c37155 710 Gene3D G3DSA:2.40.50.140 619 695 4.6E-25 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS04035 859e62ee310e059b9e156f2b50c37155 710 PIRSF PIRSF005499 3 709 1.5E-291 T 14-09-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AY555_RS04035 859e62ee310e059b9e156f2b50c37155 710 PANTHER PTHR11252 2 693 0.0 T 14-09-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AY555_RS04035 859e62ee310e059b9e156f2b50c37155 710 SMART SM00316 621 691 7.6E-22 T 14-09-2016 IPR022967 RNA-binding domain, S1 AY555_RS04035 859e62ee310e059b9e156f2b50c37155 710 Gene3D G3DSA:3.30.1370.10 553 618 1.5E-24 T 14-09-2016 IPR004088 K Homology domain, type 1 GO:0003723 AY555_RS04035 859e62ee310e059b9e156f2b50c37155 710 Pfam PF03725 3' exoribonuclease family, domain 2 461 529 6.9E-5 T 14-09-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 AY555_RS04035 859e62ee310e059b9e156f2b50c37155 710 Pfam PF03725 3' exoribonuclease family, domain 2 149 213 3.2E-13 T 14-09-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 AY555_RS04035 859e62ee310e059b9e156f2b50c37155 710 Pfam PF00575 S1 RNA binding domain 619 691 1.5E-16 T 14-09-2016 IPR003029 S1 domain GO:0003676 AY555_RS04035 859e62ee310e059b9e156f2b50c37155 710 SUPERFAMILY SSF54211 293 489 1.72E-47 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AY555_RS04035 859e62ee310e059b9e156f2b50c37155 710 SUPERFAMILY SSF54791 555 641 2.65E-23 T 14-09-2016 IPR004088 K Homology domain, type 1 GO:0003723 AY555_RS04035 859e62ee310e059b9e156f2b50c37155 710 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 2.9E-20 T 14-09-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 AY555_RS04035 859e62ee310e059b9e156f2b50c37155 710 Pfam PF01138 3' exoribonuclease family, domain 1 16 146 1.6E-24 T 14-09-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 AY555_RS04035 859e62ee310e059b9e156f2b50c37155 710 SUPERFAMILY SSF54211 3 146 4.86E-52 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AY555_RS04035 859e62ee310e059b9e156f2b50c37155 710 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 12 693 0.0 T 14-09-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AY555_RS04035 859e62ee310e059b9e156f2b50c37155 710 SMART SM00322 553 618 1.1E-11 T 14-09-2016 IPR004087 K Homology domain GO:0003676 AY555_RS04035 859e62ee310e059b9e156f2b50c37155 710 SUPERFAMILY SSF50249 621 697 1.64E-20 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS04035 859e62ee310e059b9e156f2b50c37155 710 Gene3D G3DSA:1.10.10.400 244 313 3.4E-18 T 14-09-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AY555_RS09820 d674e81afdd0ae3cfe9383a3be49b7ab 158 SUPERFAMILY SSF46785 3 59 3.63E-12 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS09820 d674e81afdd0ae3cfe9383a3be49b7ab 158 Gene3D G3DSA:1.10.10.10 11 58 7.3E-15 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS09820 d674e81afdd0ae3cfe9383a3be49b7ab 158 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 81 125 1.0E-8 T 14-09-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 AY555_RS09820 d674e81afdd0ae3cfe9383a3be49b7ab 158 Pfam PF02863 Arginine repressor, C-terminal domain 81 141 2.8E-13 T 14-09-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 AY555_RS09820 d674e81afdd0ae3cfe9383a3be49b7ab 158 Pfam PF01316 Arginine repressor, DNA binding domain 10 55 6.4E-13 T 14-09-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 UniPathway: UPA00068 AY555_RS09820 d674e81afdd0ae3cfe9383a3be49b7ab 158 SUPERFAMILY SSF55252 81 144 1.7E-12 T 14-09-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 AY555_RS09820 d674e81afdd0ae3cfe9383a3be49b7ab 158 PRINTS PR01467 Bacterial arginine repressor signature 22 35 6.6E-14 T 14-09-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 AY555_RS09820 d674e81afdd0ae3cfe9383a3be49b7ab 158 PRINTS PR01467 Bacterial arginine repressor signature 38 53 6.6E-14 T 14-09-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 AY555_RS09820 d674e81afdd0ae3cfe9383a3be49b7ab 158 PRINTS PR01467 Bacterial arginine repressor signature 116 131 6.6E-14 T 14-09-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 AY555_RS09820 d674e81afdd0ae3cfe9383a3be49b7ab 158 Gene3D G3DSA:3.30.1360.40 79 147 8.0E-19 T 14-09-2016 IPR024946 Arginine repressor C-terminal-like domain AY555_RS09820 d674e81afdd0ae3cfe9383a3be49b7ab 158 PANTHER PTHR34471:SF1 11 151 6.1E-22 T 14-09-2016 AY555_RS09820 d674e81afdd0ae3cfe9383a3be49b7ab 158 PANTHER PTHR34471 11 151 6.1E-22 T 14-09-2016 AY555_RS09820 d674e81afdd0ae3cfe9383a3be49b7ab 158 Hamap MF_00173 Arginine repressor [argR]. 1 150 29.763 T 14-09-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 AY555_RS07865 05e6126c0b129dda8cee481e825d44cb 240 PANTHER PTHR21427 24 228 2.0E-36 T 14-09-2016 AY555_RS07865 05e6126c0b129dda8cee481e825d44cb 240 Pfam PF08511 COQ9 130 202 1.8E-29 T 14-09-2016 IPR013718 COQ9 UniPathway: UPA00232 AY555_RS07865 05e6126c0b129dda8cee481e825d44cb 240 TIGRFAM TIGR02396 diverge_rpsU: rpsU-divergently transcribed protein 27 205 6.3E-52 T 14-09-2016 IPR012762 Ubiquinone biosynthesis protein COQ9 GO:0006744 UniPathway: UPA00232 AY555_RS03265 9f68a69d5fb1b2b9b1f327c3e14794be 680 Pfam PF01578 Cytochrome C assembly protein 102 308 1.5E-51 T 14-09-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AY555_RS03265 9f68a69d5fb1b2b9b1f327c3e14794be 680 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 328 657 6.4E-109 T 14-09-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal AY555_RS03265 9f68a69d5fb1b2b9b1f327c3e14794be 680 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 93 119 9.1E-90 T 14-09-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AY555_RS03265 9f68a69d5fb1b2b9b1f327c3e14794be 680 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 172 194 9.1E-90 T 14-09-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AY555_RS03265 9f68a69d5fb1b2b9b1f327c3e14794be 680 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 145 162 9.1E-90 T 14-09-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AY555_RS03265 9f68a69d5fb1b2b9b1f327c3e14794be 680 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 307 323 9.1E-90 T 14-09-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AY555_RS03265 9f68a69d5fb1b2b9b1f327c3e14794be 680 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 257 277 9.1E-90 T 14-09-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AY555_RS03265 9f68a69d5fb1b2b9b1f327c3e14794be 680 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 287 307 9.1E-90 T 14-09-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AY555_RS03265 9f68a69d5fb1b2b9b1f327c3e14794be 680 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 223 249 9.1E-90 T 14-09-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AY555_RS03265 9f68a69d5fb1b2b9b1f327c3e14794be 680 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 323 342 9.1E-90 T 14-09-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AY555_RS03265 9f68a69d5fb1b2b9b1f327c3e14794be 680 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 66 660 3.4E-191 T 14-09-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AY555_RS03265 9f68a69d5fb1b2b9b1f327c3e14794be 680 PANTHER PTHR30009:SF0 12 430 2.8E-252 T 14-09-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AY555_RS03265 9f68a69d5fb1b2b9b1f327c3e14794be 680 PANTHER PTHR30009 487 675 2.8E-252 T 14-09-2016 AY555_RS03265 9f68a69d5fb1b2b9b1f327c3e14794be 680 PANTHER PTHR30009:SF0 487 675 2.8E-252 T 14-09-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AY555_RS03265 9f68a69d5fb1b2b9b1f327c3e14794be 680 PANTHER PTHR30009 12 430 2.8E-252 T 14-09-2016 AY555_RS03265 9f68a69d5fb1b2b9b1f327c3e14794be 680 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 364 381 1.4E-53 T 14-09-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AY555_RS03265 9f68a69d5fb1b2b9b1f327c3e14794be 680 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 126 149 1.4E-53 T 14-09-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AY555_RS03265 9f68a69d5fb1b2b9b1f327c3e14794be 680 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 407 426 1.4E-53 T 14-09-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AY555_RS03265 9f68a69d5fb1b2b9b1f327c3e14794be 680 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 650 663 1.4E-53 T 14-09-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AY555_RS03265 9f68a69d5fb1b2b9b1f327c3e14794be 680 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 202 217 1.4E-53 T 14-09-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AY555_RS03265 9f68a69d5fb1b2b9b1f327c3e14794be 680 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 326 341 1.4E-53 T 14-09-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AY555_RS03265 9f68a69d5fb1b2b9b1f327c3e14794be 680 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 17 41 1.4E-53 T 14-09-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AY555_RS05730 e6389469c99c53a3274974c7689b1ac8 643 Pfam PF00005 ABC transporter 17 175 3.3E-25 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AY555_RS05730 e6389469c99c53a3274974c7689b1ac8 643 Pfam PF00005 ABC transporter 325 461 7.9E-21 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AY555_RS05730 e6389469c99c53a3274974c7689b1ac8 643 Gene3D G3DSA:3.40.50.300 308 519 2.1E-46 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS05730 e6389469c99c53a3274974c7689b1ac8 643 Gene3D G3DSA:3.40.50.300 1 261 1.3E-48 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS05730 e6389469c99c53a3274974c7689b1ac8 643 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AY555_RS05730 e6389469c99c53a3274974c7689b1ac8 643 Pfam PF16326 ABC transporter C-terminal domain 569 628 1.6E-8 T 14-09-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 AY555_RS05730 e6389469c99c53a3274974c7689b1ac8 643 Pfam PF12848 ABC transporter 214 285 7.2E-24 T 14-09-2016 IPR032781 ABC-transporter extension domain AY555_RS05730 e6389469c99c53a3274974c7689b1ac8 643 SUPERFAMILY SSF52540 2 236 2.25E-49 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS05730 e6389469c99c53a3274974c7689b1ac8 643 SUPERFAMILY SSF52540 292 511 2.58E-46 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS05730 e6389469c99c53a3274974c7689b1ac8 643 SMART SM00382 26 220 4.8E-12 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS05730 e6389469c99c53a3274974c7689b1ac8 643 SMART SM00382 334 506 5.3E-8 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS05730 e6389469c99c53a3274974c7689b1ac8 643 PANTHER PTHR19211 1 564 4.0E-246 T 14-09-2016 AY555_RS05560 258394802f1a5a91072ed032517aa846 753 SMART SM00304 310 363 1.6E-6 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AY555_RS05560 258394802f1a5a91072ed032517aa846 753 SUPERFAMILY SSF158472 312 357 2.48E-7 T 14-09-2016 AY555_RS05560 258394802f1a5a91072ed032517aa846 753 Gene3D G3DSA:1.10.287.950 514 715 5.5E-37 T 14-09-2016 AY555_RS05560 258394802f1a5a91072ed032517aa846 753 SUPERFAMILY SSF58104 497 744 7.85E-46 T 14-09-2016 AY555_RS05560 258394802f1a5a91072ed032517aa846 753 PANTHER PTHR32089 473 748 4.4E-55 T 14-09-2016 AY555_RS05560 258394802f1a5a91072ed032517aa846 753 PANTHER PTHR32089 250 345 4.4E-55 T 14-09-2016 AY555_RS05560 258394802f1a5a91072ed032517aa846 753 SMART SM00283 498 745 2.0E-33 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AY555_RS05560 258394802f1a5a91072ed032517aa846 753 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 566 715 5.8E-29 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AY555_RS05560 258394802f1a5a91072ed032517aa846 753 Pfam PF00672 HAMP domain 289 358 2.1E-9 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AY555_RS02895 5e43c843aca96e417ec545507d25ae60 96 PANTHER PTHR33571 1 93 3.0E-24 T 14-09-2016 AY555_RS02895 5e43c843aca96e417ec545507d25ae60 96 SUPERFAMILY SSF81301 3 95 5.82E-17 T 14-09-2016 AY555_RS02895 5e43c843aca96e417ec545507d25ae60 96 PANTHER PTHR33571:SF1 1 93 3.0E-24 T 14-09-2016 AY555_RS02895 5e43c843aca96e417ec545507d25ae60 96 Gene3D G3DSA:3.30.460.10 5 95 1.1E-19 T 14-09-2016 AY555_RS02895 5e43c843aca96e417ec545507d25ae60 96 Pfam PF01909 Nucleotidyltransferase domain 28 92 3.9E-8 T 14-09-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 AY555_RS07255 773c884be77c115b027c32e965c5105c 144 SUPERFAMILY SSF46785 2 61 3.97E-11 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS07255 773c884be77c115b027c32e965c5105c 144 Pfam PF13404 AsnC-type helix-turn-helix domain 3 44 2.8E-13 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AY555_RS07255 773c884be77c115b027c32e965c5105c 144 Gene3D G3DSA:3.30.70.920 69 141 3.1E-11 T 14-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AY555_RS07255 773c884be77c115b027c32e965c5105c 144 SUPERFAMILY SSF54909 66 143 1.47E-10 T 14-09-2016 IPR011008 Dimeric alpha-beta barrel AY555_RS07255 773c884be77c115b027c32e965c5105c 144 SMART SM00344 3 111 4.6E-16 T 14-09-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AY555_RS07255 773c884be77c115b027c32e965c5105c 144 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 1.1E-9 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AY555_RS07255 773c884be77c115b027c32e965c5105c 144 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 1.1E-9 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AY555_RS07255 773c884be77c115b027c32e965c5105c 144 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 1.1E-9 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AY555_RS07255 773c884be77c115b027c32e965c5105c 144 Gene3D G3DSA:1.10.10.10 1 55 1.3E-17 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS07255 773c884be77c115b027c32e965c5105c 144 Pfam PF01037 Lrp/AsnC ligand binding domain 75 139 1.6E-9 T 14-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AY555_RS07255 773c884be77c115b027c32e965c5105c 144 PANTHER PTHR30154 1 139 6.5E-27 T 14-09-2016 AY555_RS07355 fb12e8d184e0b4b7caa0a681a8a2071c 285 PANTHER PTHR11558 5 281 2.1E-86 T 14-09-2016 AY555_RS07355 fb12e8d184e0b4b7caa0a681a8a2071c 285 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 3 284 32.206 T 14-09-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 AY555_RS07355 fb12e8d184e0b4b7caa0a681a8a2071c 285 Gene3D G3DSA:3.40.50.150 57 282 9.0E-69 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS07355 fb12e8d184e0b4b7caa0a681a8a2071c 285 TIGRFAM TIGR00417 speE: spermidine synthase 5 278 2.7E-78 T 14-09-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 AY555_RS07355 fb12e8d184e0b4b7caa0a681a8a2071c 285 Gene3D G3DSA:2.30.140.10 3 56 6.8E-16 T 14-09-2016 AY555_RS07355 fb12e8d184e0b4b7caa0a681a8a2071c 285 Pfam PF01564 Spermine/spermidine synthase 10 237 2.1E-58 T 14-09-2016 AY555_RS07355 fb12e8d184e0b4b7caa0a681a8a2071c 285 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 80 93 - T 14-09-2016 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 AY555_RS07355 fb12e8d184e0b4b7caa0a681a8a2071c 285 SUPERFAMILY SSF53335 4 282 9.08E-75 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS08025 7eac4008ec7c79f0c1c2548c00213a41 255 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 19 88 1.7E-12 T 14-09-2016 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 AY555_RS08025 7eac4008ec7c79f0c1c2548c00213a41 255 PIRSF PIRSF037208 1 246 5.2E-80 T 14-09-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic AY555_RS08025 7eac4008ec7c79f0c1c2548c00213a41 255 PANTHER PTHR21367:SF0 18 239 6.6E-58 T 14-09-2016 AY555_RS08025 7eac4008ec7c79f0c1c2548c00213a41 255 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 108 230 2.5E-34 T 14-09-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 AY555_RS08025 7eac4008ec7c79f0c1c2548c00213a41 255 PANTHER PTHR21367 18 239 6.6E-58 T 14-09-2016 IPR030700 Arginine-tRNA-protein transferase AY555_RS08025 7eac4008ec7c79f0c1c2548c00213a41 255 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 1 239 41.056 T 14-09-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic AY555_RS08025 7eac4008ec7c79f0c1c2548c00213a41 255 SUPERFAMILY SSF55729 82 237 2.39E-22 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AY555_RS03445 a23b740dfac339d0fd01e801bcf241a0 264 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 101 255 4.9E-23 T 14-09-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like AY555_RS03445 a23b740dfac339d0fd01e801bcf241a0 264 PANTHER PTHR35869 79 256 1.5E-13 T 14-09-2016 AY555_RS03445 a23b740dfac339d0fd01e801bcf241a0 264 Gene3D G3DSA:2.50.20.10 92 255 2.6E-20 T 14-09-2016 AY555_RS03445 a23b740dfac339d0fd01e801bcf241a0 264 SUPERFAMILY SSF89392 92 257 1.88E-21 T 14-09-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX AY555_RS09180 2d5b877053745041183e2a71aacc559f 124 Gene3D G3DSA:3.40.50.2300 4 122 2.9E-36 T 14-09-2016 AY555_RS09180 2d5b877053745041183e2a71aacc559f 124 SMART SM00448 3 116 4.3E-30 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS09180 2d5b877053745041183e2a71aacc559f 124 PANTHER PTHR26402:SF511 3 122 2.8E-31 T 14-09-2016 AY555_RS09180 2d5b877053745041183e2a71aacc559f 124 SUPERFAMILY SSF52172 5 122 1.18E-34 T 14-09-2016 IPR011006 CheY-like superfamily AY555_RS09180 2d5b877053745041183e2a71aacc559f 124 PANTHER PTHR26402 3 122 2.8E-31 T 14-09-2016 AY555_RS09180 2d5b877053745041183e2a71aacc559f 124 Pfam PF00072 Response regulator receiver domain 5 116 4.9E-26 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS08190 8983f2857ebd9c1f6ec6711833528396 323 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 6 323 6.8E-83 T 14-09-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 AY555_RS08190 8983f2857ebd9c1f6ec6711833528396 323 SUPERFAMILY SSF56042 145 306 4.19E-33 T 14-09-2016 IPR010918 AIR synthase-related protein, C-terminal domain AY555_RS08190 8983f2857ebd9c1f6ec6711833528396 323 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 141 1.6E-21 T 14-09-2016 IPR016188 PurM-like, N-terminal domain AY555_RS08190 8983f2857ebd9c1f6ec6711833528396 323 SUPERFAMILY SSF55326 7 141 4.19E-29 T 14-09-2016 AY555_RS08190 8983f2857ebd9c1f6ec6711833528396 323 Gene3D G3DSA:3.30.1330.10 5 143 2.2E-35 T 14-09-2016 IPR016188 PurM-like, N-terminal domain AY555_RS08190 8983f2857ebd9c1f6ec6711833528396 323 PIRSF PIRSF005303 2 323 1.7E-73 T 14-09-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 AY555_RS08190 8983f2857ebd9c1f6ec6711833528396 323 PANTHER PTHR30270 6 323 1.6E-85 T 14-09-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 AY555_RS08190 8983f2857ebd9c1f6ec6711833528396 323 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 4 320 27.011 T 14-09-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 AY555_RS08190 8983f2857ebd9c1f6ec6711833528396 323 PANTHER PTHR30270:SF0 6 323 1.6E-85 T 14-09-2016 AY555_RS08190 8983f2857ebd9c1f6ec6711833528396 323 Pfam PF02769 AIR synthase related protein, C-terminal domain 154 302 1.2E-10 T 14-09-2016 IPR010918 AIR synthase-related protein, C-terminal domain AY555_RS08190 8983f2857ebd9c1f6ec6711833528396 323 Gene3D G3DSA:3.90.650.10 148 323 2.2E-39 T 14-09-2016 IPR010918 AIR synthase-related protein, C-terminal domain AY555_RS09055 38d647bc9f48a246583acd17215e3e6a 474 SUPERFAMILY SSF50800 73 167 2.09E-25 T 14-09-2016 IPR011037 Pyruvate kinase-like, insert domain AY555_RS09055 38d647bc9f48a246583acd17215e3e6a 474 Pfam PF00224 Pyruvate kinase, barrel domain 5 335 6.9E-116 T 14-09-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS09055 38d647bc9f48a246583acd17215e3e6a 474 ProSitePatterns PS00110 Pyruvate kinase active site signature. 212 224 - T 14-09-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS09055 38d647bc9f48a246583acd17215e3e6a 474 SUPERFAMILY SSF52935 320 470 2.35E-37 T 14-09-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS09055 38d647bc9f48a246583acd17215e3e6a 474 Gene3D G3DSA:2.40.33.10 76 168 2.2E-27 T 14-09-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS09055 38d647bc9f48a246583acd17215e3e6a 474 Gene3D G3DSA:3.40.1380.20 323 467 5.8E-46 T 14-09-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS09055 38d647bc9f48a246583acd17215e3e6a 474 PRINTS PR01050 Pyruvate kinase family signature 310 326 3.5E-65 T 14-09-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS09055 38d647bc9f48a246583acd17215e3e6a 474 PRINTS PR01050 Pyruvate kinase family signature 241 265 3.5E-65 T 14-09-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS09055 38d647bc9f48a246583acd17215e3e6a 474 PRINTS PR01050 Pyruvate kinase family signature 266 290 3.5E-65 T 14-09-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS09055 38d647bc9f48a246583acd17215e3e6a 474 PRINTS PR01050 Pyruvate kinase family signature 291 309 3.5E-65 T 14-09-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS09055 38d647bc9f48a246583acd17215e3e6a 474 PRINTS PR01050 Pyruvate kinase family signature 187 201 3.5E-65 T 14-09-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS09055 38d647bc9f48a246583acd17215e3e6a 474 PRINTS PR01050 Pyruvate kinase family signature 62 78 3.5E-65 T 14-09-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS09055 38d647bc9f48a246583acd17215e3e6a 474 PRINTS PR01050 Pyruvate kinase family signature 214 240 3.5E-65 T 14-09-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS09055 38d647bc9f48a246583acd17215e3e6a 474 Gene3D G3DSA:3.20.20.60 5 75 1.4E-96 T 14-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AY555_RS09055 38d647bc9f48a246583acd17215e3e6a 474 Gene3D G3DSA:3.20.20.60 169 322 1.4E-96 T 14-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AY555_RS09055 38d647bc9f48a246583acd17215e3e6a 474 SUPERFAMILY SSF51621 168 341 1.43E-93 T 14-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AY555_RS09055 38d647bc9f48a246583acd17215e3e6a 474 SUPERFAMILY SSF51621 3 78 1.43E-93 T 14-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AY555_RS09055 38d647bc9f48a246583acd17215e3e6a 474 PANTHER PTHR11817 2 474 2.0E-201 T 14-09-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS09055 38d647bc9f48a246583acd17215e3e6a 474 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 5 470 3.1E-153 T 14-09-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS09055 38d647bc9f48a246583acd17215e3e6a 474 Pfam PF02887 Pyruvate kinase, alpha/beta domain 355 467 2.1E-31 T 14-09-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS04360 dda4953c11e9697b19d6ec5569293afc 634 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 14-09-2016 IPR018181 Heat shock protein 70, conserved site AY555_RS04360 dda4953c11e9697b19d6ec5569293afc 634 Gene3D G3DSA:2.60.34.10 385 526 1.9E-71 T 14-09-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain AY555_RS04360 dda4953c11e9697b19d6ec5569293afc 634 Gene3D G3DSA:1.20.1270.10 527 598 2.9E-28 T 14-09-2016 IPR029048 Heat shock protein 70kD, C-terminal domain AY555_RS04360 dda4953c11e9697b19d6ec5569293afc 634 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 332 346 - T 14-09-2016 IPR018181 Heat shock protein 70, conserved site AY555_RS04360 dda4953c11e9697b19d6ec5569293afc 634 Gene3D G3DSA:3.30.420.40 314 356 1.7E-36 T 14-09-2016 AY555_RS04360 dda4953c11e9697b19d6ec5569293afc 634 Gene3D G3DSA:3.30.420.40 192 224 1.7E-36 T 14-09-2016 AY555_RS04360 dda4953c11e9697b19d6ec5569293afc 634 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 628 37.496 T 14-09-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 AY555_RS04360 dda4953c11e9697b19d6ec5569293afc 634 SUPERFAMILY SSF100934 502 600 4.32E-19 T 14-09-2016 IPR029048 Heat shock protein 70kD, C-terminal domain AY555_RS04360 dda4953c11e9697b19d6ec5569293afc 634 Gene3D G3DSA:3.30.420.40 4 52 6.5E-65 T 14-09-2016 AY555_RS04360 dda4953c11e9697b19d6ec5569293afc 634 Gene3D G3DSA:3.30.420.40 119 191 6.5E-65 T 14-09-2016 AY555_RS04360 dda4953c11e9697b19d6ec5569293afc 634 SUPERFAMILY SSF53067 4 184 2.96E-65 T 14-09-2016 AY555_RS04360 dda4953c11e9697b19d6ec5569293afc 634 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 599 1.4E-296 T 14-09-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 AY555_RS04360 dda4953c11e9697b19d6ec5569293afc 634 Gene3D G3DSA:3.90.640.10 225 310 9.6E-31 T 14-09-2016 AY555_RS04360 dda4953c11e9697b19d6ec5569293afc 634 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 14-09-2016 IPR018181 Heat shock protein 70, conserved site AY555_RS04360 dda4953c11e9697b19d6ec5569293afc 634 Pfam PF00012 Hsp70 protein 4 599 1.2E-267 T 14-09-2016 IPR013126 Heat shock protein 70 family AY555_RS04360 dda4953c11e9697b19d6ec5569293afc 634 PRINTS PR00301 70kDa heat shock protein signature 329 345 4.7E-82 T 14-09-2016 IPR013126 Heat shock protein 70 family AY555_RS04360 dda4953c11e9697b19d6ec5569293afc 634 PRINTS PR00301 70kDa heat shock protein signature 31 43 4.7E-82 T 14-09-2016 IPR013126 Heat shock protein 70 family AY555_RS04360 dda4953c11e9697b19d6ec5569293afc 634 PRINTS PR00301 70kDa heat shock protein signature 464 480 4.7E-82 T 14-09-2016 IPR013126 Heat shock protein 70 family AY555_RS04360 dda4953c11e9697b19d6ec5569293afc 634 PRINTS PR00301 70kDa heat shock protein signature 360 380 4.7E-82 T 14-09-2016 IPR013126 Heat shock protein 70 family AY555_RS04360 dda4953c11e9697b19d6ec5569293afc 634 PRINTS PR00301 70kDa heat shock protein signature 3 16 4.7E-82 T 14-09-2016 IPR013126 Heat shock protein 70 family AY555_RS04360 dda4953c11e9697b19d6ec5569293afc 634 PRINTS PR00301 70kDa heat shock protein signature 138 158 4.7E-82 T 14-09-2016 IPR013126 Heat shock protein 70 family AY555_RS04360 dda4953c11e9697b19d6ec5569293afc 634 PRINTS PR00301 70kDa heat shock protein signature 383 402 4.7E-82 T 14-09-2016 IPR013126 Heat shock protein 70 family AY555_RS04360 dda4953c11e9697b19d6ec5569293afc 634 PRINTS PR00301 70kDa heat shock protein signature 197 207 4.7E-82 T 14-09-2016 IPR013126 Heat shock protein 70 family AY555_RS04360 dda4953c11e9697b19d6ec5569293afc 634 PRINTS PR00301 70kDa heat shock protein signature 54 62 4.7E-82 T 14-09-2016 IPR013126 Heat shock protein 70 family AY555_RS04360 dda4953c11e9697b19d6ec5569293afc 634 SUPERFAMILY SSF53067 187 377 3.09E-68 T 14-09-2016 AY555_RS04360 dda4953c11e9697b19d6ec5569293afc 634 SUPERFAMILY SSF100920 379 535 7.06E-62 T 14-09-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain AY555_RS04360 dda4953c11e9697b19d6ec5569293afc 634 Gene3D G3DSA:3.30.30.30 53 109 8.2E-28 T 14-09-2016 AY555_RS04360 dda4953c11e9697b19d6ec5569293afc 634 PANTHER PTHR19375:SF173 2 634 0.0 T 14-09-2016 AY555_RS04360 dda4953c11e9697b19d6ec5569293afc 634 PANTHER PTHR19375 2 634 0.0 T 14-09-2016 AY555_RS07610 f9afaa27406e0d1c8e255791ba278196 122 Gene3D G3DSA:2.60.300.12 9 104 3.0E-32 T 14-09-2016 IPR000361 FeS cluster biogenesis AY555_RS07610 f9afaa27406e0d1c8e255791ba278196 122 PANTHER PTHR10072 1 118 1.2E-52 T 14-09-2016 AY555_RS07610 f9afaa27406e0d1c8e255791ba278196 122 Pfam PF01521 Iron-sulphur cluster biosynthesis 10 111 4.1E-20 T 14-09-2016 IPR000361 FeS cluster biogenesis AY555_RS07610 f9afaa27406e0d1c8e255791ba278196 122 SUPERFAMILY SSF89360 7 101 2.55E-28 T 14-09-2016 IPR000361 FeS cluster biogenesis AY555_RS07610 f9afaa27406e0d1c8e255791ba278196 122 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 10 115 1.8E-35 T 14-09-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 AY555_RS07610 f9afaa27406e0d1c8e255791ba278196 122 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 96 113 - T 14-09-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site AY555_RS05260 9e08cdbcd9f9c26c0b0fbb801f990ea8 776 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 486 492 - T 14-09-2016 IPR018303 P-type ATPase, phosphorylation site AY555_RS05260 9e08cdbcd9f9c26c0b0fbb801f990ea8 776 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 255 499 2.7E-28 T 14-09-2016 IPR001757 P-type ATPase GO:0016021 AY555_RS05260 9e08cdbcd9f9c26c0b0fbb801f990ea8 776 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 594 750 5.5E-27 T 14-09-2016 IPR001757 P-type ATPase GO:0016021 AY555_RS05260 9e08cdbcd9f9c26c0b0fbb801f990ea8 776 Pfam PF00702 haloacid dehalogenase-like hydrolase 480 680 2.3E-30 T 14-09-2016 AY555_RS05260 9e08cdbcd9f9c26c0b0fbb801f990ea8 776 Gene3D G3DSA:3.30.70.100 70 135 1.5E-13 T 14-09-2016 AY555_RS05260 9e08cdbcd9f9c26c0b0fbb801f990ea8 776 Pfam PF00122 E1-E2 ATPase 254 475 4.9E-49 T 14-09-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 AY555_RS05260 9e08cdbcd9f9c26c0b0fbb801f990ea8 776 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 204 768 1.8E-143 T 14-09-2016 AY555_RS05260 9e08cdbcd9f9c26c0b0fbb801f990ea8 776 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 666 682 8.3E-5 T 14-09-2016 IPR001757 P-type ATPase GO:0016021 AY555_RS05260 9e08cdbcd9f9c26c0b0fbb801f990ea8 776 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 538 556 8.3E-5 T 14-09-2016 IPR001757 P-type ATPase GO:0016021 AY555_RS05260 9e08cdbcd9f9c26c0b0fbb801f990ea8 776 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 697 722 8.3E-5 T 14-09-2016 IPR001757 P-type ATPase GO:0016021 AY555_RS05260 9e08cdbcd9f9c26c0b0fbb801f990ea8 776 PANTHER PTHR24093:SF50 72 772 2.4E-144 T 14-09-2016 AY555_RS05260 9e08cdbcd9f9c26c0b0fbb801f990ea8 776 Pfam PF00403 Heavy-metal-associated domain 72 128 7.9E-9 T 14-09-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AY555_RS05260 9e08cdbcd9f9c26c0b0fbb801f990ea8 776 SUPERFAMILY SSF81653 291 383 1.96E-17 T 14-09-2016 AY555_RS05260 9e08cdbcd9f9c26c0b0fbb801f990ea8 776 ProSitePatterns PS01229 Hypothetical cof family signature 2. 666 688 - T 14-09-2016 AY555_RS05260 9e08cdbcd9f9c26c0b0fbb801f990ea8 776 SUPERFAMILY SSF81665 229 282 2.09E-12 T 14-09-2016 AY555_RS05260 9e08cdbcd9f9c26c0b0fbb801f990ea8 776 SUPERFAMILY SSF81665 384 477 2.09E-12 T 14-09-2016 AY555_RS05260 9e08cdbcd9f9c26c0b0fbb801f990ea8 776 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 221 768 2.5E-145 T 14-09-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 AY555_RS05260 9e08cdbcd9f9c26c0b0fbb801f990ea8 776 PANTHER PTHR24093 72 772 2.4E-144 T 14-09-2016 AY555_RS05260 9e08cdbcd9f9c26c0b0fbb801f990ea8 776 Gene3D G3DSA:3.40.50.1000 592 734 1.4E-39 T 14-09-2016 IPR023214 HAD-like domain AY555_RS05260 9e08cdbcd9f9c26c0b0fbb801f990ea8 776 Gene3D G3DSA:3.40.50.1000 458 500 1.4E-39 T 14-09-2016 IPR023214 HAD-like domain AY555_RS05260 9e08cdbcd9f9c26c0b0fbb801f990ea8 776 SUPERFAMILY SSF56784 482 535 5.74E-40 T 14-09-2016 IPR023214 HAD-like domain AY555_RS05260 9e08cdbcd9f9c26c0b0fbb801f990ea8 776 SUPERFAMILY SSF56784 582 766 5.74E-40 T 14-09-2016 IPR023214 HAD-like domain AY555_RS05260 9e08cdbcd9f9c26c0b0fbb801f990ea8 776 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 613 623 1.7E-16 T 14-09-2016 AY555_RS05260 9e08cdbcd9f9c26c0b0fbb801f990ea8 776 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 333 347 1.7E-16 T 14-09-2016 AY555_RS05260 9e08cdbcd9f9c26c0b0fbb801f990ea8 776 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 666 685 1.7E-16 T 14-09-2016 AY555_RS05260 9e08cdbcd9f9c26c0b0fbb801f990ea8 776 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 484 498 1.7E-16 T 14-09-2016 AY555_RS05260 9e08cdbcd9f9c26c0b0fbb801f990ea8 776 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 689 701 1.7E-16 T 14-09-2016 AY555_RS05260 9e08cdbcd9f9c26c0b0fbb801f990ea8 776 Gene3D G3DSA:2.70.150.10 225 383 3.6E-16 T 14-09-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 AY555_RS05260 9e08cdbcd9f9c26c0b0fbb801f990ea8 776 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 251 768 2.5E-96 T 14-09-2016 AY555_RS05260 9e08cdbcd9f9c26c0b0fbb801f990ea8 776 SUPERFAMILY SSF55008 64 138 3.67E-16 T 14-09-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AY555_RS03470 6451f8f98d1edcb234116dd24eed4504 448 Pfam PF03572 Peptidase family S41 197 364 3.5E-56 T 14-09-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 AY555_RS03470 6451f8f98d1edcb234116dd24eed4504 448 PANTHER PTHR32060 54 442 5.2E-113 T 14-09-2016 AY555_RS03470 6451f8f98d1edcb234116dd24eed4504 448 Gene3D G3DSA:3.30.750.44 49 106 4.8E-10 T 14-09-2016 AY555_RS03470 6451f8f98d1edcb234116dd24eed4504 448 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 53 370 1.2E-102 T 14-09-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 AY555_RS03470 6451f8f98d1edcb234116dd24eed4504 448 SUPERFAMILY SSF52096 35 119 1.99E-83 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AY555_RS03470 6451f8f98d1edcb234116dd24eed4504 448 SUPERFAMILY SSF52096 191 369 1.99E-83 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AY555_RS03470 6451f8f98d1edcb234116dd24eed4504 448 Pfam PF13180 PDZ domain 101 174 2.0E-11 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AY555_RS03470 6451f8f98d1edcb234116dd24eed4504 448 SUPERFAMILY SSF50156 71 190 6.97E-23 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AY555_RS03470 6451f8f98d1edcb234116dd24eed4504 448 SMART SM00245 173 365 4.8E-76 T 14-09-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 AY555_RS03470 6451f8f98d1edcb234116dd24eed4504 448 Gene3D G3DSA:3.90.226.10 183 367 1.0E-66 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AY555_RS03470 6451f8f98d1edcb234116dd24eed4504 448 Gene3D G3DSA:3.90.226.10 416 438 1.0E-66 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AY555_RS03470 6451f8f98d1edcb234116dd24eed4504 448 Gene3D G3DSA:2.30.42.10 107 182 3.6E-28 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AY555_RS03470 6451f8f98d1edcb234116dd24eed4504 448 SMART SM00228 101 172 2.0E-14 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AY555_RS00440 e1c64c66a14c4cac9e1f9ec2f5618ab5 474 SUPERFAMILY SSF56176 5 218 2.76E-73 T 14-09-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AY555_RS00440 e1c64c66a14c4cac9e1f9ec2f5618ab5 474 Pfam PF02913 FAD linked oxidases, C-terminal domain 219 467 2.0E-55 T 14-09-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AY555_RS00440 e1c64c66a14c4cac9e1f9ec2f5618ab5 474 PANTHER PTHR11748 1 469 4.1E-202 T 14-09-2016 AY555_RS00440 e1c64c66a14c4cac9e1f9ec2f5618ab5 474 Gene3D G3DSA:1.10.45.10 429 466 6.2E-12 T 14-09-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AY555_RS00440 e1c64c66a14c4cac9e1f9ec2f5618ab5 474 Gene3D G3DSA:3.30.465.10 97 218 3.3E-37 T 14-09-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AY555_RS00440 e1c64c66a14c4cac9e1f9ec2f5618ab5 474 Pfam PF01565 FAD binding domain 44 178 2.6E-36 T 14-09-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AY555_RS00440 e1c64c66a14c4cac9e1f9ec2f5618ab5 474 Gene3D G3DSA:3.30.43.10 4 96 1.4E-27 T 14-09-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AY555_RS00440 e1c64c66a14c4cac9e1f9ec2f5618ab5 474 SUPERFAMILY SSF55103 191 470 1.64E-61 T 14-09-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AY555_RS00440 e1c64c66a14c4cac9e1f9ec2f5618ab5 474 PANTHER PTHR11748:SF76 1 469 4.1E-202 T 14-09-2016 AY555_RS07085 ad24db3d5cddb7b10d3636e93064477e 207 PIRSF PIRSF033239 3 207 2.1E-48 T 14-09-2016 IPR010331 Exopolysaccharide synthesis, ExoD AY555_RS07085 ad24db3d5cddb7b10d3636e93064477e 207 Pfam PF06055 Exopolysaccharide synthesis, ExoD 15 191 2.2E-49 T 14-09-2016 IPR010331 Exopolysaccharide synthesis, ExoD AY555_RS07085 ad24db3d5cddb7b10d3636e93064477e 207 PANTHER PTHR41795 10 196 1.2E-23 T 14-09-2016 AY555_RS08545 5f54950ed19f4f5ebd461434690e87a2 233 Gene3D G3DSA:3.40.30.10 2 203 7.1E-39 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS08545 5f54950ed19f4f5ebd461434690e87a2 233 Pfam PF01323 DSBA-like thioredoxin domain 3 202 2.1E-35 T 14-09-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 AY555_RS08545 5f54950ed19f4f5ebd461434690e87a2 233 SUPERFAMILY SSF52833 1 209 1.16E-41 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS08545 5f54950ed19f4f5ebd461434690e87a2 233 PANTHER PTHR13887 1 230 9.3E-48 T 14-09-2016 AY555_RS08545 5f54950ed19f4f5ebd461434690e87a2 233 PANTHER PTHR13887:SF10 1 230 9.3E-48 T 14-09-2016 AY555_RS01655 a10d5bdff182646d6b1cd57fdbb82c7d 249 SUPERFAMILY SSF75217 17 247 2.46E-95 T 14-09-2016 IPR029028 Alpha/beta knot methyltransferases AY555_RS01655 a10d5bdff182646d6b1cd57fdbb82c7d 249 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 39 234 3.5E-58 T 14-09-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AY555_RS01655 a10d5bdff182646d6b1cd57fdbb82c7d 249 PIRSF PIRSF000386 17 248 2.9E-93 T 14-09-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AY555_RS01655 a10d5bdff182646d6b1cd57fdbb82c7d 249 Gene3D G3DSA:3.40.1280.10 18 173 1.3E-64 T 14-09-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AY555_RS01655 a10d5bdff182646d6b1cd57fdbb82c7d 249 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 249 103.022 T 14-09-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AY555_RS01655 a10d5bdff182646d6b1cd57fdbb82c7d 249 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 19 248 5.2E-87 T 14-09-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AY555_RS01655 a10d5bdff182646d6b1cd57fdbb82c7d 249 PANTHER PTHR32125:SF1 21 241 3.1E-99 T 14-09-2016 AY555_RS01655 a10d5bdff182646d6b1cd57fdbb82c7d 249 Gene3D G3DSA:1.10.1270.20 174 247 9.0E-31 T 14-09-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AY555_RS01655 a10d5bdff182646d6b1cd57fdbb82c7d 249 PANTHER PTHR32125 21 241 3.1E-99 T 14-09-2016 AY555_RS04240 f4c63f6c158a4142f88f4dc77daea829 517 SMART SM00388 270 337 2.6E-18 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS04240 f4c63f6c158a4142f88f4dc77daea829 517 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 446 1.7E-17 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS04240 f4c63f6c158a4142f88f4dc77daea829 517 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 485 1.7E-17 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS04240 f4c63f6c158a4142f88f4dc77daea829 517 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 460 1.7E-17 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS04240 f4c63f6c158a4142f88f4dc77daea829 517 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 504 1.7E-17 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS04240 f4c63f6c158a4142f88f4dc77daea829 517 PANTHER PTHR24423 123 509 3.6E-92 T 14-09-2016 AY555_RS04240 f4c63f6c158a4142f88f4dc77daea829 517 SUPERFAMILY SSF55874 326 506 3.14E-46 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS04240 f4c63f6c158a4142f88f4dc77daea829 517 Gene3D G3DSA:1.10.287.130 264 322 4.6E-19 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS04240 f4c63f6c158a4142f88f4dc77daea829 517 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 383 505 8.2E-26 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS04240 f4c63f6c158a4142f88f4dc77daea829 517 SMART SM00387 383 507 9.0E-39 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS04240 f4c63f6c158a4142f88f4dc77daea829 517 Gene3D G3DSA:3.30.450.20 161 262 8.7E-9 T 14-09-2016 AY555_RS04240 f4c63f6c158a4142f88f4dc77daea829 517 Pfam PF00512 His Kinase A (phospho-acceptor) domain 271 335 3.5E-16 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS04240 f4c63f6c158a4142f88f4dc77daea829 517 Gene3D G3DSA:3.30.565.10 323 508 3.3E-46 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS04240 f4c63f6c158a4142f88f4dc77daea829 517 SUPERFAMILY SSF47384 255 335 2.35E-18 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS04240 f4c63f6c158a4142f88f4dc77daea829 517 SUPERFAMILY SSF55785 145 262 4.54E-5 T 14-09-2016 IPR000014 PAS domain AY555_RS03290 8617031af892c636bf687adf1be14ef5 226 Gene3D G3DSA:3.40.30.10 40 202 2.2E-33 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS03290 8617031af892c636bf687adf1be14ef5 226 SUPERFAMILY SSF52833 68 202 3.48E-30 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS03290 8617031af892c636bf687adf1be14ef5 226 ProSitePatterns PS00194 Thioredoxin family active site. 91 109 - T 14-09-2016 IPR017937 Thioredoxin, conserved site GO:0045454 AY555_RS03290 8617031af892c636bf687adf1be14ef5 226 PANTHER PTHR10681 68 201 5.5E-20 T 14-09-2016 AY555_RS03290 8617031af892c636bf687adf1be14ef5 226 PANTHER PTHR10681:SF107 68 201 5.5E-20 T 14-09-2016 AY555_RS03290 8617031af892c636bf687adf1be14ef5 226 Pfam PF00578 AhpC/TSA family 68 179 1.3E-13 T 14-09-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 AY555_RS08995 c7a602bf76ad18ff8bda25e4ba4fd55c 766 Gene3D G3DSA:3.40.50.10750 573 730 3.6E-52 T 14-09-2016 AY555_RS08995 c7a602bf76ad18ff8bda25e4ba4fd55c 766 SUPERFAMILY SSF53223 13 164 1.22E-51 T 14-09-2016 AY555_RS08995 c7a602bf76ad18ff8bda25e4ba4fd55c 766 Pfam PF01515 Phosphate acetyl/butaryl transferase 435 753 1.5E-89 T 14-09-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 AY555_RS08995 c7a602bf76ad18ff8bda25e4ba4fd55c 766 Gene3D G3DSA:3.40.50.720 164 453 1.0E-83 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS08995 c7a602bf76ad18ff8bda25e4ba4fd55c 766 Gene3D G3DSA:3.40.50.10380 13 163 7.7E-48 T 14-09-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AY555_RS08995 c7a602bf76ad18ff8bda25e4ba4fd55c 766 PIRSF PIRSF036684 1 762 0.0 T 14-09-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 AY555_RS08995 c7a602bf76ad18ff8bda25e4ba4fd55c 766 Pfam PF03949 Malic enzyme, NAD binding domain 168 364 6.7E-19 T 14-09-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 AY555_RS08995 c7a602bf76ad18ff8bda25e4ba4fd55c 766 SMART SM01274 21 154 4.4E-75 T 14-09-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AY555_RS08995 c7a602bf76ad18ff8bda25e4ba4fd55c 766 SMART SM00919 166 405 6.3E-130 T 14-09-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 AY555_RS08995 c7a602bf76ad18ff8bda25e4ba4fd55c 766 SUPERFAMILY SSF51735 166 457 7.54E-82 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS08995 c7a602bf76ad18ff8bda25e4ba4fd55c 766 Pfam PF00390 Malic enzyme, N-terminal domain 22 118 1.6E-21 T 14-09-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AY555_RS08995 c7a602bf76ad18ff8bda25e4ba4fd55c 766 PANTHER PTHR23406 34 428 1.2E-149 T 14-09-2016 AY555_RS08995 c7a602bf76ad18ff8bda25e4ba4fd55c 766 SUPERFAMILY SSF53659 434 757 6.99E-87 T 14-09-2016 AY555_RS06075 2504678cce34a4adb2b57a46f8be2a87 284 SUPERFAMILY SSF48452 44 167 1.14E-11 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS06075 2504678cce34a4adb2b57a46f8be2a87 284 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 15 248 6.5E-84 T 14-09-2016 IPR017689 Outer membrane protein assembly factor BamD AY555_RS06075 2504678cce34a4adb2b57a46f8be2a87 284 Pfam PF13525 Outer membrane lipoprotein 41 235 1.1E-50 T 14-09-2016 AY555_RS06075 2504678cce34a4adb2b57a46f8be2a87 284 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 10 243 42.776 T 14-09-2016 IPR017689 Outer membrane protein assembly factor BamD AY555_RS06075 2504678cce34a4adb2b57a46f8be2a87 284 PANTHER PTHR37423 4 261 7.2E-62 T 14-09-2016 AY555_RS06075 2504678cce34a4adb2b57a46f8be2a87 284 Gene3D G3DSA:1.25.40.10 44 233 1.8E-11 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS09170 d89f9ded2b324aa202cd189a98f1c455 551 Pfam PF03572 Peptidase family S41 300 460 1.0E-40 T 14-09-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 AY555_RS09170 d89f9ded2b324aa202cd189a98f1c455 551 PANTHER PTHR32060 164 459 1.1E-76 T 14-09-2016 AY555_RS09170 d89f9ded2b324aa202cd189a98f1c455 551 Gene3D G3DSA:2.30.42.10 194 281 6.8E-12 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AY555_RS09170 d89f9ded2b324aa202cd189a98f1c455 551 SMART SM00228 199 272 2.0E-9 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AY555_RS09170 d89f9ded2b324aa202cd189a98f1c455 551 SUPERFAMILY SSF50156 176 287 7.15E-14 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AY555_RS09170 d89f9ded2b324aa202cd189a98f1c455 551 Gene3D G3DSA:3.90.226.10 282 461 1.1E-44 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AY555_RS09170 d89f9ded2b324aa202cd189a98f1c455 551 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 162 463 6.4E-68 T 14-09-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 AY555_RS09170 d89f9ded2b324aa202cd189a98f1c455 551 Pfam PF13180 PDZ domain 200 280 3.8E-8 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AY555_RS09170 d89f9ded2b324aa202cd189a98f1c455 551 SUPERFAMILY SSF52096 291 464 5.14E-57 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AY555_RS09170 d89f9ded2b324aa202cd189a98f1c455 551 SUPERFAMILY SSF52096 160 217 5.14E-57 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AY555_RS09170 d89f9ded2b324aa202cd189a98f1c455 551 SMART SM00245 272 464 3.7E-48 T 14-09-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 AY555_RS02485 ef2b2691c431c3b2b5747a33e34a69c1 325 SUPERFAMILY SSF52540 9 243 1.15E-63 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS02485 ef2b2691c431c3b2b5747a33e34a69c1 325 PANTHER PTHR24220 14 256 5.2E-104 T 14-09-2016 AY555_RS02485 ef2b2691c431c3b2b5747a33e34a69c1 325 PANTHER PTHR24220:SF305 14 256 5.2E-104 T 14-09-2016 AY555_RS02485 ef2b2691c431c3b2b5747a33e34a69c1 325 Gene3D G3DSA:3.40.50.300 10 239 1.4E-69 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS02485 ef2b2691c431c3b2b5747a33e34a69c1 325 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AY555_RS02485 ef2b2691c431c3b2b5747a33e34a69c1 325 Pfam PF00005 ABC transporter 34 176 8.6E-35 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AY555_RS02485 ef2b2691c431c3b2b5747a33e34a69c1 325 SMART SM00382 43 223 1.3E-13 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS00690 613485a681d67be769d9a2208e674e02 293 PANTHER PTHR22572 7 290 6.1E-92 T 14-09-2016 AY555_RS00690 613485a681d67be769d9a2208e674e02 293 Gene3D G3DSA:3.90.550.10 6 271 4.4E-58 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AY555_RS00690 613485a681d67be769d9a2208e674e02 293 PANTHER PTHR22572:SF14 7 290 6.1E-92 T 14-09-2016 AY555_RS00690 613485a681d67be769d9a2208e674e02 293 Pfam PF00483 Nucleotidyl transferase 12 267 7.2E-22 T 14-09-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 AY555_RS00690 613485a681d67be769d9a2208e674e02 293 SUPERFAMILY SSF53448 2 271 1.85E-57 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AY555_RS06245 8307e501fb8ca100bd7c0b94dcb974f8 904 PANTHER PTHR30001:SF1 1 539 8.2E-238 T 14-09-2016 AY555_RS06245 8307e501fb8ca100bd7c0b94dcb974f8 904 Pfam PF10150 Ribonuclease E/G family 170 441 1.9E-92 T 14-09-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AY555_RS06245 8307e501fb8ca100bd7c0b94dcb974f8 904 Gene3D G3DSA:2.40.50.140 32 83 8.9E-39 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS06245 8307e501fb8ca100bd7c0b94dcb974f8 904 Gene3D G3DSA:2.40.50.140 132 174 8.9E-39 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS06245 8307e501fb8ca100bd7c0b94dcb974f8 904 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 14 475 1.8E-157 T 14-09-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 AY555_RS06245 8307e501fb8ca100bd7c0b94dcb974f8 904 Pfam PF00575 S1 RNA binding domain 37 94 2.9E-5 T 14-09-2016 IPR003029 S1 domain GO:0003676 AY555_RS06245 8307e501fb8ca100bd7c0b94dcb974f8 904 PANTHER PTHR30001 1 539 8.2E-238 T 14-09-2016 AY555_RS06245 8307e501fb8ca100bd7c0b94dcb974f8 904 Hamap MF_00970 Ribonuclease E [rne]. 2 904 30.562 T 14-09-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 AY555_RS06245 8307e501fb8ca100bd7c0b94dcb974f8 904 SMART SM00316 38 168 2.8E-4 T 14-09-2016 IPR022967 RNA-binding domain, S1 AY555_RS06245 8307e501fb8ca100bd7c0b94dcb974f8 904 SUPERFAMILY SSF50249 130 174 1.71E-15 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS06245 8307e501fb8ca100bd7c0b94dcb974f8 904 SUPERFAMILY SSF50249 40 81 1.71E-15 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS05195 502a781c05b34f192144d52d284d48e2 590 Pfam PF00990 Diguanylate cyclase, GGDEF domain 413 569 3.1E-38 T 14-09-2016 IPR000160 GGDEF domain AY555_RS05195 502a781c05b34f192144d52d284d48e2 590 PANTHER PTHR10799:SF774 310 570 1.5E-23 T 14-09-2016 AY555_RS05195 502a781c05b34f192144d52d284d48e2 590 Gene3D G3DSA:3.30.450.20 124 235 7.7E-15 T 14-09-2016 AY555_RS05195 502a781c05b34f192144d52d284d48e2 590 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 131 242 3.6E-10 T 14-09-2016 IPR000014 PAS domain AY555_RS05195 502a781c05b34f192144d52d284d48e2 590 SUPERFAMILY SSF55073 417 576 9.42E-42 T 14-09-2016 IPR029787 Nucleotide cyclase AY555_RS05195 502a781c05b34f192144d52d284d48e2 590 SUPERFAMILY SSF55781 269 410 7.85E-6 T 14-09-2016 IPR029016 GAF domain-like AY555_RS05195 502a781c05b34f192144d52d284d48e2 590 Pfam PF13426 PAS domain 150 235 2.3E-7 T 14-09-2016 IPR000014 PAS domain AY555_RS05195 502a781c05b34f192144d52d284d48e2 590 PANTHER PTHR10799 310 570 1.5E-23 T 14-09-2016 AY555_RS05195 502a781c05b34f192144d52d284d48e2 590 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 411 575 8.9E-42 T 14-09-2016 IPR000160 GGDEF domain AY555_RS05195 502a781c05b34f192144d52d284d48e2 590 SMART SM00267 401 575 3.3E-47 T 14-09-2016 IPR000160 GGDEF domain AY555_RS05195 502a781c05b34f192144d52d284d48e2 590 Gene3D G3DSA:3.30.70.270 413 579 8.4E-46 T 14-09-2016 AY555_RS05195 502a781c05b34f192144d52d284d48e2 590 Gene3D G3DSA:3.30.450.40 241 408 4.0E-6 T 14-09-2016 IPR029016 GAF domain-like AY555_RS05195 502a781c05b34f192144d52d284d48e2 590 SUPERFAMILY SSF55785 124 235 5.76E-17 T 14-09-2016 IPR000014 PAS domain AY555_RS04420 26022446fff184814c63c452b8a4d28b 282 SUPERFAMILY SSF81624 2 145 7.33E-39 T 14-09-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AY555_RS04420 26022446fff184814c63c452b8a4d28b 282 Gene3D G3DSA:1.10.8.50 137 282 4.3E-43 T 14-09-2016 AY555_RS04420 26022446fff184814c63c452b8a4d28b 282 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 118 7.2E-34 T 14-09-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AY555_RS04420 26022446fff184814c63c452b8a4d28b 282 PANTHER PTHR22993:SF15 1 282 1.2E-101 T 14-09-2016 AY555_RS04420 26022446fff184814c63c452b8a4d28b 282 SMART SM00898 2 120 2.0E-46 T 14-09-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AY555_RS04420 26022446fff184814c63c452b8a4d28b 282 Gene3D G3DSA:3.20.190.10 2 136 9.0E-38 T 14-09-2016 AY555_RS04420 26022446fff184814c63c452b8a4d28b 282 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 136 225 5.3E-25 T 14-09-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AY555_RS04420 26022446fff184814c63c452b8a4d28b 282 PANTHER PTHR22993 1 282 1.2E-101 T 14-09-2016 AY555_RS04420 26022446fff184814c63c452b8a4d28b 282 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 282 39.91 T 14-09-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AY555_RS04420 26022446fff184814c63c452b8a4d28b 282 SUPERFAMILY SSF57716 224 281 2.85E-11 T 14-09-2016 AY555_RS04420 26022446fff184814c63c452b8a4d28b 282 SUPERFAMILY SSF46946 137 228 4.71E-28 T 14-09-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AY555_RS04420 26022446fff184814c63c452b8a4d28b 282 SMART SM01232 136 228 2.5E-42 T 14-09-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AY555_RS04420 26022446fff184814c63c452b8a4d28b 282 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 281 1.8E-80 T 14-09-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AY555_RS05505 a68e080c2757f06b49c50a0ec1014593 274 SUPERFAMILY SSF53335 88 189 9.12E-9 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS05505 a68e080c2757f06b49c50a0ec1014593 274 Gene3D G3DSA:3.40.50.150 113 205 1.9E-6 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS00470 2d5d814c505325f00e804f91ae4ecd1c 502 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 1 499 35.675 T 14-09-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 AY555_RS00470 2d5d814c505325f00e804f91ae4ecd1c 502 SUPERFAMILY SSF53187 179 496 3.08E-118 T 14-09-2016 AY555_RS00470 2d5d814c505325f00e804f91ae4ecd1c 502 PANTHER PTHR11963:SF13 12 502 2.3E-185 T 14-09-2016 AY555_RS00470 2d5d814c505325f00e804f91ae4ecd1c 502 PANTHER PTHR11963 12 502 2.3E-185 T 14-09-2016 AY555_RS00470 2d5d814c505325f00e804f91ae4ecd1c 502 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 344 351 - T 14-09-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AY555_RS00470 2d5d814c505325f00e804f91ae4ecd1c 502 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 184 490 7.6E-117 T 14-09-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AY555_RS00470 2d5d814c505325f00e804f91ae4ecd1c 502 SUPERFAMILY SSF52949 5 182 3.3E-33 T 14-09-2016 AY555_RS00470 2d5d814c505325f00e804f91ae4ecd1c 502 Gene3D G3DSA:3.40.220.10 2 160 1.2E-36 T 14-09-2016 AY555_RS00470 2d5d814c505325f00e804f91ae4ecd1c 502 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 17 144 1.6E-24 T 14-09-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AY555_RS00470 2d5d814c505325f00e804f91ae4ecd1c 502 PRINTS PR00481 Cytosol aminopeptidase signature 340 360 1.2E-51 T 14-09-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AY555_RS00470 2d5d814c505325f00e804f91ae4ecd1c 502 PRINTS PR00481 Cytosol aminopeptidase signature 318 339 1.2E-51 T 14-09-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AY555_RS00470 2d5d814c505325f00e804f91ae4ecd1c 502 PRINTS PR00481 Cytosol aminopeptidase signature 369 384 1.2E-51 T 14-09-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AY555_RS00470 2d5d814c505325f00e804f91ae4ecd1c 502 PRINTS PR00481 Cytosol aminopeptidase signature 259 276 1.2E-51 T 14-09-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AY555_RS00470 2d5d814c505325f00e804f91ae4ecd1c 502 PRINTS PR00481 Cytosol aminopeptidase signature 281 302 1.2E-51 T 14-09-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AY555_RS00470 2d5d814c505325f00e804f91ae4ecd1c 502 Gene3D G3DSA:3.40.630.10 169 499 3.4E-132 T 14-09-2016 AY555_RS00825 6acfbbaf5673da1b9cac989f755a94ce 127 TIGRFAM TIGR00494 crcB: protein CrcB 8 121 4.1E-24 T 14-09-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AY555_RS00825 6acfbbaf5673da1b9cac989f755a94ce 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 6 123 18.289 T 14-09-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AY555_RS00825 6acfbbaf5673da1b9cac989f755a94ce 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 8 118 5.0E-21 T 14-09-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AY555_RS00825 6acfbbaf5673da1b9cac989f755a94ce 127 PANTHER PTHR28259 1 127 6.5E-34 T 14-09-2016 AY555_RS05830 6205608010617cc8b8856f8119a6e5ee 262 PANTHER PTHR24220 13 257 1.6E-112 T 14-09-2016 AY555_RS05830 6205608010617cc8b8856f8119a6e5ee 262 PANTHER PTHR24220:SF567 13 257 1.6E-112 T 14-09-2016 AY555_RS05830 6205608010617cc8b8856f8119a6e5ee 262 Gene3D G3DSA:3.40.50.300 11 241 3.5E-73 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS05830 6205608010617cc8b8856f8119a6e5ee 262 SUPERFAMILY SSF52540 6 237 2.35E-65 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS05830 6205608010617cc8b8856f8119a6e5ee 262 SMART SM00382 36 226 2.7E-16 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS05830 6205608010617cc8b8856f8119a6e5ee 262 Pfam PF00005 ABC transporter 27 176 2.0E-32 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AY555_RS05830 6205608010617cc8b8856f8119a6e5ee 262 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AY555_RS08075 b4d86b0b262e425c5f568efdce8b08ef 422 Pfam PF07724 AAA domain (Cdc48 subfamily) 111 308 7.7E-51 T 14-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AY555_RS08075 b4d86b0b262e425c5f568efdce8b08ef 422 SMART SM00994 12 51 2.4E-24 T 14-09-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AY555_RS08075 b4d86b0b262e425c5f568efdce8b08ef 422 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 412 53.09 T 14-09-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AY555_RS08075 b4d86b0b262e425c5f568efdce8b08ef 422 PANTHER PTHR11262 2 412 6.1E-250 T 14-09-2016 AY555_RS08075 b4d86b0b262e425c5f568efdce8b08ef 422 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 10 408 5.2E-199 T 14-09-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AY555_RS08075 b4d86b0b262e425c5f568efdce8b08ef 422 Gene3D G3DSA:3.40.50.300 291 308 4.1E-51 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08075 b4d86b0b262e425c5f568efdce8b08ef 422 Gene3D G3DSA:3.40.50.300 66 252 4.1E-51 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08075 b4d86b0b262e425c5f568efdce8b08ef 422 SUPERFAMILY SSF52540 63 397 3.25E-73 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08075 b4d86b0b262e425c5f568efdce8b08ef 422 SMART SM01086 314 409 5.7E-32 T 14-09-2016 IPR019489 Clp ATPase, C-terminal AY555_RS08075 b4d86b0b262e425c5f568efdce8b08ef 422 SMART SM00382 110 330 1.1E-11 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS08075 b4d86b0b262e425c5f568efdce8b08ef 422 Pfam PF06689 ClpX C4-type zinc finger 13 50 4.9E-20 T 14-09-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AY555_RS08075 b4d86b0b262e425c5f568efdce8b08ef 422 SUPERFAMILY SSF57716 13 48 1.43E-11 T 14-09-2016 AY555_RS08075 b4d86b0b262e425c5f568efdce8b08ef 422 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 314 390 2.3E-15 T 14-09-2016 IPR019489 Clp ATPase, C-terminal AY555_RS08075 b4d86b0b262e425c5f568efdce8b08ef 422 Gene3D G3DSA:1.10.8.60 314 412 1.1E-35 T 14-09-2016 AY555_RS05250 c32f6b4f9052ea2faf57cea5b3859ea7 470 Pfam PF13746 4Fe-4S dicluster domain 205 308 2.4E-38 T 14-09-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AY555_RS05250 c32f6b4f9052ea2faf57cea5b3859ea7 470 Gene3D G3DSA:2.60.40.10 344 469 3.6E-29 T 14-09-2016 IPR013783 Immunoglobulin-like fold AY555_RS05250 c32f6b4f9052ea2faf57cea5b3859ea7 470 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 344 468 2.0E-26 T 14-09-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain AY555_RS05250 c32f6b4f9052ea2faf57cea5b3859ea7 470 Gene3D G3DSA:3.30.70.20 202 292 4.6E-10 T 14-09-2016 AY555_RS05250 c32f6b4f9052ea2faf57cea5b3859ea7 470 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 22 457 2.7E-146 T 14-09-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 AY555_RS05250 c32f6b4f9052ea2faf57cea5b3859ea7 470 PANTHER PTHR24960 6 383 1.2E-102 T 14-09-2016 AY555_RS05250 c32f6b4f9052ea2faf57cea5b3859ea7 470 SUPERFAMILY SSF54862 91 114 1.26E-23 T 14-09-2016 AY555_RS05250 c32f6b4f9052ea2faf57cea5b3859ea7 470 SUPERFAMILY SSF54862 160 325 1.26E-23 T 14-09-2016 AY555_RS05250 c32f6b4f9052ea2faf57cea5b3859ea7 470 PANTHER PTHR24960:SF45 6 383 1.2E-102 T 14-09-2016 AY555_RS05250 c32f6b4f9052ea2faf57cea5b3859ea7 470 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 256 267 - T 14-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AY555_RS05250 c32f6b4f9052ea2faf57cea5b3859ea7 470 Pfam PF12801 4Fe-4S binding domain 83 118 2.7E-7 T 14-09-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AY555_RS06090 67436e4d9104242f086be9eae9e7fcbf 536 SUPERFAMILY SSF55307 208 323 4.35E-42 T 14-09-2016 IPR008280 Tubulin/FtsZ, C-terminal AY555_RS06090 67436e4d9104242f086be9eae9e7fcbf 536 PANTHER PTHR30314 15 353 6.1E-175 T 14-09-2016 AY555_RS06090 67436e4d9104242f086be9eae9e7fcbf 536 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 15 338 5.5E-124 T 14-09-2016 IPR000158 Cell division protein FtsZ GO:0005525 AY555_RS06090 67436e4d9104242f086be9eae9e7fcbf 536 PANTHER PTHR30314:SF3 15 353 6.1E-175 T 14-09-2016 AY555_RS06090 67436e4d9104242f086be9eae9e7fcbf 536 SMART SM00864 17 209 1.2E-106 T 14-09-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AY555_RS06090 67436e4d9104242f086be9eae9e7fcbf 536 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 18 178 2.4E-40 T 14-09-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AY555_RS06090 67436e4d9104242f086be9eae9e7fcbf 536 SMART SM00865 211 329 1.2E-57 T 14-09-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain AY555_RS06090 67436e4d9104242f086be9eae9e7fcbf 536 PRINTS PR00423 Cell division protein FtsZ signature 193 215 2.0E-50 T 14-09-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AY555_RS06090 67436e4d9104242f086be9eae9e7fcbf 536 PRINTS PR00423 Cell division protein FtsZ signature 216 237 2.0E-50 T 14-09-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AY555_RS06090 67436e4d9104242f086be9eae9e7fcbf 536 PRINTS PR00423 Cell division protein FtsZ signature 102 122 2.0E-50 T 14-09-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AY555_RS06090 67436e4d9104242f086be9eae9e7fcbf 536 PRINTS PR00423 Cell division protein FtsZ signature 130 151 2.0E-50 T 14-09-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AY555_RS06090 67436e4d9104242f086be9eae9e7fcbf 536 SUPERFAMILY SSF52490 17 212 9.16E-69 T 14-09-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AY555_RS06090 67436e4d9104242f086be9eae9e7fcbf 536 Gene3D G3DSA:3.40.50.1440 17 218 2.7E-93 T 14-09-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AY555_RS06090 67436e4d9104242f086be9eae9e7fcbf 536 Pfam PF12327 FtsZ family, C-terminal domain 226 320 1.8E-35 T 14-09-2016 IPR024757 Cell division protein FtsZ, C-terminal AY555_RS06090 67436e4d9104242f086be9eae9e7fcbf 536 ProSitePatterns PS01135 FtsZ protein signature 2. 101 122 - T 14-09-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AY555_RS06090 67436e4d9104242f086be9eae9e7fcbf 536 Gene3D G3DSA:3.30.1330.20 219 323 2.5E-48 T 14-09-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain AY555_RS06090 67436e4d9104242f086be9eae9e7fcbf 536 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 13 346 37.411 T 14-09-2016 IPR000158 Cell division protein FtsZ GO:0005525 AY555_RS06090 67436e4d9104242f086be9eae9e7fcbf 536 ProSitePatterns PS01134 FtsZ protein signature 1. 48 82 - T 14-09-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AY555_RS01640 9546c504e09423865f53f34888b87428 508 PANTHER PTHR11564:SF7 1 438 1.3E-228 T 14-09-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 AY555_RS01640 9546c504e09423865f53f34888b87428 508 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 449 32.229 T 14-09-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 AY555_RS01640 9546c504e09423865f53f34888b87428 508 SUPERFAMILY SSF52540 96 300 2.72E-51 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS01640 9546c504e09423865f53f34888b87428 508 Gene3D G3DSA:3.40.50.300 96 299 1.1E-71 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS01640 9546c504e09423865f53f34888b87428 508 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 431 1.3E-175 T 14-09-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 AY555_RS01640 9546c504e09423865f53f34888b87428 508 SMART SM00382 101 303 3.6E-9 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS01640 9546c504e09423865f53f34888b87428 508 SUPERFAMILY SSF47364 1 90 9.27E-27 T 14-09-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 AY555_RS01640 9546c504e09423865f53f34888b87428 508 Gene3D G3DSA:1.20.120.140 2 89 6.8E-33 T 14-09-2016 AY555_RS01640 9546c504e09423865f53f34888b87428 508 PANTHER PTHR11564 1 438 1.3E-228 T 14-09-2016 AY555_RS01640 9546c504e09423865f53f34888b87428 508 SUPERFAMILY SSF47446 300 432 2.09E-42 T 14-09-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 AY555_RS01640 9546c504e09423865f53f34888b87428 508 Gene3D G3DSA:1.10.260.30 329 434 1.7E-36 T 14-09-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 AY555_RS01640 9546c504e09423865f53f34888b87428 508 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.4E-18 T 14-09-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 AY555_RS01640 9546c504e09423865f53f34888b87428 508 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 271 284 - T 14-09-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 AY555_RS01640 9546c504e09423865f53f34888b87428 508 SMART SM00962 102 298 4.9E-104 T 14-09-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 AY555_RS01640 9546c504e09423865f53f34888b87428 508 Pfam PF00448 SRP54-type protein, GTPase domain 105 298 7.0E-68 T 14-09-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 AY555_RS01640 9546c504e09423865f53f34888b87428 508 SMART SM00963 1 86 4.0E-35 T 14-09-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 AY555_RS01640 9546c504e09423865f53f34888b87428 508 Pfam PF02978 Signal peptide binding domain 329 429 8.7E-31 T 14-09-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 AY555_RS09000 8a2ee5a68cb66a4b70e37e5a77e49e46 666 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 622 639 - T 14-09-2016 IPR001882 Biotin-binding site AY555_RS09000 8a2ee5a68cb66a4b70e37e5a77e49e46 666 Gene3D G3DSA:3.30.1490.20 129 202 1.1E-27 T 14-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AY555_RS09000 8a2ee5a68cb66a4b70e37e5a77e49e46 666 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 321 6.3E-77 T 14-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AY555_RS09000 8a2ee5a68cb66a4b70e37e5a77e49e46 666 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 285 292 - T 14-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AY555_RS09000 8a2ee5a68cb66a4b70e37e5a77e49e46 666 SUPERFAMILY SSF56059 83 347 2.47E-67 T 14-09-2016 AY555_RS09000 8a2ee5a68cb66a4b70e37e5a77e49e46 666 Pfam PF02785 Biotin carboxylase C-terminal domain 335 442 5.6E-35 T 14-09-2016 IPR005482 Biotin carboxylase, C-terminal AY555_RS09000 8a2ee5a68cb66a4b70e37e5a77e49e46 666 SUPERFAMILY SSF51246 330 444 1.41E-38 T 14-09-2016 IPR011054 Rudiment single hybrid motif AY555_RS09000 8a2ee5a68cb66a4b70e37e5a77e49e46 666 Pfam PF00364 Biotin-requiring enzyme 602 664 4.8E-15 T 14-09-2016 IPR000089 Biotin/lipoyl attachment AY555_RS09000 8a2ee5a68cb66a4b70e37e5a77e49e46 666 Gene3D G3DSA:3.40.50.20 1 128 1.1E-51 T 14-09-2016 IPR016185 Pre-ATP-grasp domain AY555_RS09000 8a2ee5a68cb66a4b70e37e5a77e49e46 666 SUPERFAMILY SSF51230 587 665 1.7E-19 T 14-09-2016 IPR011053 Single hybrid motif AY555_RS09000 8a2ee5a68cb66a4b70e37e5a77e49e46 666 Gene3D G3DSA:3.30.470.20 203 444 2.7E-95 T 14-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AY555_RS09000 8a2ee5a68cb66a4b70e37e5a77e49e46 666 SUPERFAMILY SSF52440 1 113 2.45E-49 T 14-09-2016 IPR016185 Pre-ATP-grasp domain AY555_RS09000 8a2ee5a68cb66a4b70e37e5a77e49e46 666 Gene3D G3DSA:2.40.50.100 597 665 7.5E-22 T 14-09-2016 AY555_RS09000 8a2ee5a68cb66a4b70e37e5a77e49e46 666 SMART SM00878 335 442 7.1E-54 T 14-09-2016 IPR005482 Biotin carboxylase, C-terminal AY555_RS09000 8a2ee5a68cb66a4b70e37e5a77e49e46 666 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 3.2E-45 T 14-09-2016 IPR005481 Biotin carboxylase-like, N-terminal domain AY555_RS09000 8a2ee5a68cb66a4b70e37e5a77e49e46 666 PANTHER PTHR18866 578 665 0.0 T 14-09-2016 AY555_RS09000 8a2ee5a68cb66a4b70e37e5a77e49e46 666 PANTHER PTHR18866 1 561 0.0 T 14-09-2016 AY555_RS05415 3e38be5378715c7ba3d5423aa619e463 191 Gene3D G3DSA:3.10.540.10 16 79 9.4E-24 T 14-09-2016 AY555_RS05415 3e38be5378715c7ba3d5423aa619e463 191 PIRSF PIRSF029557 3 190 4.2E-49 T 14-09-2016 IPR010707 Protein of unknown function DUF1285 AY555_RS05415 3e38be5378715c7ba3d5423aa619e463 191 Pfam PF06938 Protein of unknown function (DUF1285) 28 184 1.8E-48 T 14-09-2016 IPR010707 Protein of unknown function DUF1285 AY555_RS05415 3e38be5378715c7ba3d5423aa619e463 191 Gene3D G3DSA:2.30.270.10 80 149 6.3E-26 T 14-09-2016 IPR023361 Protein of unknown function DUF1285, beta-roll domain AY555_RS01800 1fe60412bca15e6ed7eb0ffb7cc9ee5f 156 Gene3D G3DSA:3.30.420.10 8 151 5.4E-58 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AY555_RS01800 1fe60412bca15e6ed7eb0ffb7cc9ee5f 156 PANTHER PTHR10642 6 147 3.9E-53 T 14-09-2016 AY555_RS01800 1fe60412bca15e6ed7eb0ffb7cc9ee5f 156 SUPERFAMILY SSF53098 9 148 6.58E-56 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AY555_RS01800 1fe60412bca15e6ed7eb0ffb7cc9ee5f 156 Hamap MF_00042 Ribonuclease H [rnhA]. 8 156 34.243 T 14-09-2016 IPR022892 Ribonuclease H GO:0004523 AY555_RS01800 1fe60412bca15e6ed7eb0ffb7cc9ee5f 156 Pfam PF00075 RNase H 10 146 1.5E-48 T 14-09-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 AY555_RS08290 e080c917402aaae85aafc34b5bd07917 740 Gene3D G3DSA:1.10.287.130 503 575 2.6E-7 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS08290 e080c917402aaae85aafc34b5bd07917 740 Gene3D G3DSA:3.30.450.20 385 498 8.3E-13 T 14-09-2016 AY555_RS08290 e080c917402aaae85aafc34b5bd07917 740 Pfam PF00512 His Kinase A (phospho-acceptor) domain 512 576 1.2E-7 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS08290 e080c917402aaae85aafc34b5bd07917 740 SUPERFAMILY SSF55874 570 727 1.06E-31 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS08290 e080c917402aaae85aafc34b5bd07917 740 Pfam PF00989 PAS fold 393 479 1.9E-5 T 14-09-2016 IPR013767 PAS fold GO:0006355 AY555_RS08290 e080c917402aaae85aafc34b5bd07917 740 SUPERFAMILY SSF55785 377 498 6.28E-10 T 14-09-2016 IPR000014 PAS domain AY555_RS08290 e080c917402aaae85aafc34b5bd07917 740 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 620 725 1.4E-16 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS08290 e080c917402aaae85aafc34b5bd07917 740 PANTHER PTHR24423:SF520 8 14 9.6E-68 T 14-09-2016 AY555_RS08290 e080c917402aaae85aafc34b5bd07917 740 PANTHER PTHR24423:SF520 368 726 9.6E-68 T 14-09-2016 AY555_RS08290 e080c917402aaae85aafc34b5bd07917 740 SUPERFAMILY SSF47384 500 577 4.9E-10 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS08290 e080c917402aaae85aafc34b5bd07917 740 PRINTS PR00344 Bacterial sensor protein C-terminal signature 691 709 4.3E-11 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS08290 e080c917402aaae85aafc34b5bd07917 740 PRINTS PR00344 Bacterial sensor protein C-terminal signature 662 676 4.3E-11 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS08290 e080c917402aaae85aafc34b5bd07917 740 PRINTS PR00344 Bacterial sensor protein C-terminal signature 680 690 4.3E-11 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS08290 e080c917402aaae85aafc34b5bd07917 740 PIRSF PIRSF037532 13 734 5.0E-231 T 14-09-2016 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator AY555_RS08290 e080c917402aaae85aafc34b5bd07917 740 Pfam PF00672 HAMP domain 304 372 2.8E-9 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AY555_RS08290 e080c917402aaae85aafc34b5bd07917 740 SMART SM00388 508 579 6.3E-9 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS08290 e080c917402aaae85aafc34b5bd07917 740 SMART SM00387 619 731 5.5E-25 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS08290 e080c917402aaae85aafc34b5bd07917 740 Gene3D G3DSA:3.30.565.10 595 725 3.2E-32 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS08290 e080c917402aaae85aafc34b5bd07917 740 SUPERFAMILY SSF158472 326 372 1.11E-7 T 14-09-2016 AY555_RS08290 e080c917402aaae85aafc34b5bd07917 740 PANTHER PTHR24423 8 14 9.6E-68 T 14-09-2016 AY555_RS08290 e080c917402aaae85aafc34b5bd07917 740 PANTHER PTHR24423 368 726 9.6E-68 T 14-09-2016 AY555_RS08290 e080c917402aaae85aafc34b5bd07917 740 SMART SM00304 323 376 2.2E-7 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AY555_RS09590 19026443f66c44e8c36f73816fcd4d81 283 PANTHER PTHR24422 1 265 3.2E-94 T 14-09-2016 AY555_RS09590 19026443f66c44e8c36f73816fcd4d81 283 Gene3D G3DSA:1.10.155.10 1 63 1.7E-9 T 14-09-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AY555_RS09590 19026443f66c44e8c36f73816fcd4d81 283 PANTHER PTHR24422:SF9 1 265 3.2E-94 T 14-09-2016 AY555_RS09590 19026443f66c44e8c36f73816fcd4d81 283 SUPERFAMILY SSF47757 1 69 1.27E-12 T 14-09-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AY555_RS09590 19026443f66c44e8c36f73816fcd4d81 283 SMART SM00138 3 266 7.2E-99 T 14-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AY555_RS09590 19026443f66c44e8c36f73816fcd4d81 283 Pfam PF03705 CheR methyltransferase, all-alpha domain 4 55 2.3E-11 T 14-09-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AY555_RS09590 19026443f66c44e8c36f73816fcd4d81 283 Gene3D G3DSA:3.40.50.150 69 263 8.9E-63 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS09590 19026443f66c44e8c36f73816fcd4d81 283 PRINTS PR00996 Glutamate methyltransferase family signature 103 123 2.0E-38 T 14-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AY555_RS09590 19026443f66c44e8c36f73816fcd4d81 283 PRINTS PR00996 Glutamate methyltransferase family signature 25 38 2.0E-38 T 14-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AY555_RS09590 19026443f66c44e8c36f73816fcd4d81 283 PRINTS PR00996 Glutamate methyltransferase family signature 138 154 2.0E-38 T 14-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AY555_RS09590 19026443f66c44e8c36f73816fcd4d81 283 PRINTS PR00996 Glutamate methyltransferase family signature 63 75 2.0E-38 T 14-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AY555_RS09590 19026443f66c44e8c36f73816fcd4d81 283 PRINTS PR00996 Glutamate methyltransferase family signature 225 248 2.0E-38 T 14-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AY555_RS09590 19026443f66c44e8c36f73816fcd4d81 283 PRINTS PR00996 Glutamate methyltransferase family signature 206 220 2.0E-38 T 14-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AY555_RS09590 19026443f66c44e8c36f73816fcd4d81 283 Pfam PF01739 CheR methyltransferase, SAM binding domain 70 261 1.2E-60 T 14-09-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AY555_RS09590 19026443f66c44e8c36f73816fcd4d81 283 SUPERFAMILY SSF53335 70 261 1.56E-48 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS01695 9e4bbebeafc20bca9cd60d1dfe40a83c 637 Pfam PF11775 Cobalamin biosynthesis protein CobT VWA domain 403 619 6.6E-106 T 14-09-2016 IPR025861 Cobalamin biosynthesis protein CobT VWA domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 AY555_RS01695 9e4bbebeafc20bca9cd60d1dfe40a83c 637 Pfam PF06213 Cobalamin biosynthesis protein CobT 11 284 1.4E-55 T 14-09-2016 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 AY555_RS01695 9e4bbebeafc20bca9cd60d1dfe40a83c 637 Gene3D G3DSA:3.40.50.410 417 598 7.9E-7 T 14-09-2016 IPR002035 von Willebrand factor, type A AY555_RS01695 9e4bbebeafc20bca9cd60d1dfe40a83c 637 SUPERFAMILY SSF53300 417 611 5.04E-16 T 14-09-2016 IPR002035 von Willebrand factor, type A AY555_RS01695 9e4bbebeafc20bca9cd60d1dfe40a83c 637 SMART SM00327 414 619 1.6E-8 T 14-09-2016 IPR002035 von Willebrand factor, type A AY555_RS01695 9e4bbebeafc20bca9cd60d1dfe40a83c 637 PIRSF PIRSF031715 1 629 5.0E-231 T 14-09-2016 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 AY555_RS04505 a48bd4d639f45e421766b83df6c1e86f 146 SUPERFAMILY SSF47413 28 73 4.74E-5 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AY555_RS04505 a48bd4d639f45e421766b83df6c1e86f 146 Gene3D G3DSA:1.10.260.40 29 72 2.8E-5 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AY555_RS04015 5cd861c9f1b64cd245ce1351856cb0f2 937 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 355 934 6.9E-246 T 14-09-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 AY555_RS04015 5cd861c9f1b64cd245ce1351856cb0f2 937 SUPERFAMILY SSF52540 435 610 1.13E-50 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04015 5cd861c9f1b64cd245ce1351856cb0f2 937 PANTHER PTHR23115 417 765 1.2E-200 T 14-09-2016 AY555_RS04015 5cd861c9f1b64cd245ce1351856cb0f2 937 Gene3D G3DSA:2.40.30.10 839 934 1.1E-37 T 14-09-2016 AY555_RS04015 5cd861c9f1b64cd245ce1351856cb0f2 937 PANTHER PTHR23115:SF184 791 933 1.2E-200 T 14-09-2016 AY555_RS04015 5cd861c9f1b64cd245ce1351856cb0f2 937 SUPERFAMILY SSF52156 718 844 2.09E-35 T 14-09-2016 IPR023115 Translation initiation factor IF- 2, domain 3 AY555_RS04015 5cd861c9f1b64cd245ce1351856cb0f2 937 Pfam PF11987 Translation-initiation factor 2 723 826 2.7E-36 T 14-09-2016 IPR023115 Translation initiation factor IF- 2, domain 3 AY555_RS04015 5cd861c9f1b64cd245ce1351856cb0f2 937 PANTHER PTHR23115 791 933 1.2E-200 T 14-09-2016 AY555_RS04015 5cd861c9f1b64cd245ce1351856cb0f2 937 Gene3D G3DSA:3.40.50.10050 738 816 5.6E-25 T 14-09-2016 IPR023115 Translation initiation factor IF- 2, domain 3 AY555_RS04015 5cd861c9f1b64cd245ce1351856cb0f2 937 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 440 593 2.9E-31 T 14-09-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AY555_RS04015 5cd861c9f1b64cd245ce1351856cb0f2 937 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 361 410 2.5E-14 T 14-09-2016 IPR006847 Translation initiation factor IF-2, N-terminal AY555_RS04015 5cd861c9f1b64cd245ce1351856cb0f2 937 SUPERFAMILY SSF50447 609 692 3.3E-24 T 14-09-2016 IPR009000 Translation protein, beta-barrel domain AY555_RS04015 5cd861c9f1b64cd245ce1351856cb0f2 937 Pfam PF00009 Elongation factor Tu GTP binding domain 441 598 1.0E-33 T 14-09-2016 AY555_RS04015 5cd861c9f1b64cd245ce1351856cb0f2 937 Gene3D G3DSA:2.40.30.10 608 702 4.4E-23 T 14-09-2016 AY555_RS04015 5cd861c9f1b64cd245ce1351856cb0f2 937 SUPERFAMILY SSF50447 838 933 2.16E-33 T 14-09-2016 IPR009000 Translation protein, beta-barrel domain AY555_RS04015 5cd861c9f1b64cd245ce1351856cb0f2 937 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 15 51 1.4E-10 T 14-09-2016 IPR013575 Initiation factor 2 associated domain, bacterial AY555_RS04015 5cd861c9f1b64cd245ce1351856cb0f2 937 PANTHER PTHR23115:SF184 417 765 1.2E-200 T 14-09-2016 AY555_RS04015 5cd861c9f1b64cd245ce1351856cb0f2 937 Gene3D G3DSA:3.40.50.300 437 597 8.5E-47 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04015 5cd861c9f1b64cd245ce1351856cb0f2 937 ProSitePatterns PS01176 Initiation factor 2 signature. 888 910 - T 14-09-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 AY555_RS04015 5cd861c9f1b64cd245ce1351856cb0f2 937 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 5 935 17.275 T 14-09-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 AY555_RS08915 796a1de36761708ccc78b1a5311b0d42 743 PRINTS PR00943 Copper-transporting ATPase signature 222 240 1.3E-9 T 14-09-2016 AY555_RS08915 796a1de36761708ccc78b1a5311b0d42 743 PRINTS PR00943 Copper-transporting ATPase signature 607 624 1.3E-9 T 14-09-2016 AY555_RS08915 796a1de36761708ccc78b1a5311b0d42 743 PRINTS PR00943 Copper-transporting ATPase signature 202 221 1.3E-9 T 14-09-2016 AY555_RS08915 796a1de36761708ccc78b1a5311b0d42 743 PRINTS PR00943 Copper-transporting ATPase signature 416 431 1.3E-9 T 14-09-2016 AY555_RS08915 796a1de36761708ccc78b1a5311b0d42 743 PRINTS PR00943 Copper-transporting ATPase signature 152 171 1.3E-9 T 14-09-2016 AY555_RS08915 796a1de36761708ccc78b1a5311b0d42 743 PRINTS PR00943 Copper-transporting ATPase signature 356 370 1.3E-9 T 14-09-2016 AY555_RS08915 796a1de36761708ccc78b1a5311b0d42 743 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 167 732 7.2E-174 T 14-09-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 AY555_RS08915 796a1de36761708ccc78b1a5311b0d42 743 ProSitePatterns PS01047 Heavy-metal-associated domain. 19 48 - T 14-09-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AY555_RS08915 796a1de36761708ccc78b1a5311b0d42 743 Gene3D G3DSA:3.40.1110.10 456 557 6.7E-10 T 14-09-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 AY555_RS08915 796a1de36761708ccc78b1a5311b0d42 743 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 205 709 1.1E-80 T 14-09-2016 IPR001757 P-type ATPase GO:0016021 AY555_RS08915 796a1de36761708ccc78b1a5311b0d42 743 Gene3D G3DSA:3.30.70.100 17 77 5.5E-15 T 14-09-2016 AY555_RS08915 796a1de36761708ccc78b1a5311b0d42 743 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 149 732 1.7E-159 T 14-09-2016 AY555_RS08915 796a1de36761708ccc78b1a5311b0d42 743 Gene3D G3DSA:3.40.50.1000 405 449 1.6E-49 T 14-09-2016 IPR023214 HAD-like domain AY555_RS08915 796a1de36761708ccc78b1a5311b0d42 743 Gene3D G3DSA:3.40.50.1000 558 699 1.6E-49 T 14-09-2016 IPR023214 HAD-like domain AY555_RS08915 796a1de36761708ccc78b1a5311b0d42 743 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 435 441 - T 14-09-2016 IPR018303 P-type ATPase, phosphorylation site AY555_RS08915 796a1de36761708ccc78b1a5311b0d42 743 SUPERFAMILY SSF55008 14 77 2.09E-11 T 14-09-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AY555_RS08915 796a1de36761708ccc78b1a5311b0d42 743 Pfam PF00403 Heavy-metal-associated domain 18 48 7.2E-7 T 14-09-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AY555_RS08915 796a1de36761708ccc78b1a5311b0d42 743 Pfam PF00122 E1-E2 ATPase 203 424 9.3E-58 T 14-09-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 AY555_RS08915 796a1de36761708ccc78b1a5311b0d42 743 SUPERFAMILY SSF81653 238 333 2.22E-24 T 14-09-2016 AY555_RS08915 796a1de36761708ccc78b1a5311b0d42 743 SUPERFAMILY SSF81665 204 236 4.58E-10 T 14-09-2016 AY555_RS08915 796a1de36761708ccc78b1a5311b0d42 743 SUPERFAMILY SSF81665 334 425 4.58E-10 T 14-09-2016 AY555_RS08915 796a1de36761708ccc78b1a5311b0d42 743 SUPERFAMILY SSF56784 546 729 5.96E-49 T 14-09-2016 IPR023214 HAD-like domain AY555_RS08915 796a1de36761708ccc78b1a5311b0d42 743 SUPERFAMILY SSF56784 431 509 5.96E-49 T 14-09-2016 IPR023214 HAD-like domain AY555_RS08915 796a1de36761708ccc78b1a5311b0d42 743 PANTHER PTHR24093:SF50 17 742 1.2E-207 T 14-09-2016 AY555_RS08915 796a1de36761708ccc78b1a5311b0d42 743 PANTHER PTHR24093 17 742 1.2E-207 T 14-09-2016 AY555_RS08915 796a1de36761708ccc78b1a5311b0d42 743 Gene3D G3DSA:2.70.150.10 173 334 1.2E-25 T 14-09-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 AY555_RS08915 796a1de36761708ccc78b1a5311b0d42 743 Pfam PF00702 haloacid dehalogenase-like hydrolase 430 644 5.9E-37 T 14-09-2016 AY555_RS08915 796a1de36761708ccc78b1a5311b0d42 743 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 433 447 2.9E-25 T 14-09-2016 AY555_RS08915 796a1de36761708ccc78b1a5311b0d42 743 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 577 587 2.9E-25 T 14-09-2016 AY555_RS08915 796a1de36761708ccc78b1a5311b0d42 743 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 630 649 2.9E-25 T 14-09-2016 AY555_RS08915 796a1de36761708ccc78b1a5311b0d42 743 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 653 665 2.9E-25 T 14-09-2016 AY555_RS08915 796a1de36761708ccc78b1a5311b0d42 743 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 283 297 2.9E-25 T 14-09-2016 AY555_RS08915 796a1de36761708ccc78b1a5311b0d42 743 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 555 566 2.9E-25 T 14-09-2016 AY555_RS07940 38b3cac75eaea67f4ae5d65de4ae3159 330 SUPERFAMILY SSF55120 82 323 4.32E-75 T 14-09-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AY555_RS07940 38b3cac75eaea67f4ae5d65de4ae3159 330 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 143 157 - T 14-09-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AY555_RS07940 38b3cac75eaea67f4ae5d65de4ae3159 330 Pfam PF01479 S4 domain 22 67 2.1E-10 T 14-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 AY555_RS07940 38b3cac75eaea67f4ae5d65de4ae3159 330 SUPERFAMILY SSF55174 22 108 1.46E-13 T 14-09-2016 AY555_RS07940 38b3cac75eaea67f4ae5d65de4ae3159 330 PANTHER PTHR11079 12 326 4.2E-126 T 14-09-2016 AY555_RS07940 38b3cac75eaea67f4ae5d65de4ae3159 330 SMART SM00363 22 81 2.0E-11 T 14-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 AY555_RS07940 38b3cac75eaea67f4ae5d65de4ae3159 330 Pfam PF00849 RNA pseudouridylate synthase 96 254 8.3E-36 T 14-09-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AY555_RS07940 38b3cac75eaea67f4ae5d65de4ae3159 330 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 19 323 4.1E-98 T 14-09-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AY555_RS07940 38b3cac75eaea67f4ae5d65de4ae3159 330 PANTHER PTHR11079:SF73 12 326 4.2E-126 T 14-09-2016 AY555_RS07940 38b3cac75eaea67f4ae5d65de4ae3159 330 Gene3D G3DSA:3.10.290.10 22 71 1.6E-12 T 14-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 AY555_RS07310 f052a24df23b07f887ece3267ec1b29c 473 Gene3D G3DSA:3.30.360.30 168 472 3.0E-133 T 14-09-2016 IPR023181 Homospermidine synthase-like, domain KEGG: 00960+2.5.1.44 AY555_RS07310 f052a24df23b07f887ece3267ec1b29c 473 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 14 154 6.9E-30 T 14-09-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 AY555_RS07310 f052a24df23b07f887ece3267ec1b29c 473 Gene3D G3DSA:3.40.50.720 4 167 3.2E-58 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS07310 f052a24df23b07f887ece3267ec1b29c 473 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 158 437 8.0E-23 T 14-09-2016 IPR032095 Saccharopine dehydrogenase, C-terminal AY555_RS09805 b1b85440660325e063bdadfbf33e8710 222 Gene3D G3DSA:3.40.50.300 1 217 7.2E-68 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS09805 b1b85440660325e063bdadfbf33e8710 222 Pfam PF00005 ABC transporter 17 148 4.1E-31 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AY555_RS09805 b1b85440660325e063bdadfbf33e8710 222 SUPERFAMILY SSF52540 2 210 1.38E-64 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS09805 b1b85440660325e063bdadfbf33e8710 222 ProSitePatterns PS00211 ABC transporters family signature. 120 134 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AY555_RS09805 b1b85440660325e063bdadfbf33e8710 222 SMART SM00382 26 196 3.4E-18 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS09805 b1b85440660325e063bdadfbf33e8710 222 PANTHER PTHR24220 3 197 1.1E-79 T 14-09-2016 AY555_RS06705 83d32fbd31be5f19554c777fde9726a5 497 SUPERFAMILY SSF53067 9 129 5.5E-30 T 14-09-2016 AY555_RS06705 83d32fbd31be5f19554c777fde9726a5 497 Gene3D G3DSA:3.30.420.40 8 127 1.4E-31 T 14-09-2016 AY555_RS06705 83d32fbd31be5f19554c777fde9726a5 497 SUPERFAMILY SSF109604 325 481 3.14E-10 T 14-09-2016 AY555_RS06705 83d32fbd31be5f19554c777fde9726a5 497 PANTHER PTHR30005 10 437 4.9E-55 T 14-09-2016 AY555_RS06705 83d32fbd31be5f19554c777fde9726a5 497 Pfam PF02541 Ppx/GppA phosphatase family 32 305 7.4E-42 T 14-09-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 AY555_RS06705 83d32fbd31be5f19554c777fde9726a5 497 Gene3D G3DSA:3.30.420.150 133 302 8.8E-21 T 14-09-2016 AY555_RS06705 83d32fbd31be5f19554c777fde9726a5 497 SUPERFAMILY SSF53067 132 306 2.36E-28 T 14-09-2016 AY555_RS11000 bf99675383bdfcf260eac3255fa88593 272 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 2 266 4.2E-71 T 14-09-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 AY555_RS11000 bf99675383bdfcf260eac3255fa88593 272 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 41 63 - T 14-09-2016 IPR030470 UbiA prenyltransferase conserved site AY555_RS11000 bf99675383bdfcf260eac3255fa88593 272 Pfam PF01040 UbiA prenyltransferase family 5 253 4.5E-48 T 14-09-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 AY555_RS11000 bf99675383bdfcf260eac3255fa88593 272 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 2 268 15.136 T 14-09-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 AY555_RS11000 bf99675383bdfcf260eac3255fa88593 272 PANTHER PTHR11048 1 269 9.5E-60 T 14-09-2016 AY555_RS07560 191086ce3fce2cd751b4ec25bacc6cb2 411 SUPERFAMILY SSF51735 108 295 3.19E-57 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS07560 191086ce3fce2cd751b4ec25bacc6cb2 411 SUPERFAMILY SSF55021 332 410 5.99E-17 T 14-09-2016 AY555_RS07560 191086ce3fce2cd751b4ec25bacc6cb2 411 SUPERFAMILY SSF52283 8 137 2.98E-46 T 14-09-2016 AY555_RS07560 191086ce3fce2cd751b4ec25bacc6cb2 411 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 14-09-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AY555_RS07560 191086ce3fce2cd751b4ec25bacc6cb2 411 PANTHER PTHR10996 1 369 1.4E-216 T 14-09-2016 AY555_RS07560 191086ce3fce2cd751b4ec25bacc6cb2 411 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 14-09-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AY555_RS07560 191086ce3fce2cd751b4ec25bacc6cb2 411 Gene3D G3DSA:3.40.50.720 8 119 4.8E-35 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS07560 191086ce3fce2cd751b4ec25bacc6cb2 411 Gene3D G3DSA:3.40.50.720 120 297 1.2E-62 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS07560 191086ce3fce2cd751b4ec25bacc6cb2 411 Gene3D G3DSA:3.30.70.260 323 410 3.4E-27 T 14-09-2016 AY555_RS07560 191086ce3fce2cd751b4ec25bacc6cb2 411 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 326 6.6E-34 T 14-09-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AY555_RS07560 191086ce3fce2cd751b4ec25bacc6cb2 411 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 8.2E-53 T 14-09-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AY555_RS07560 191086ce3fce2cd751b4ec25bacc6cb2 411 PANTHER PTHR10996:SF18 1 369 1.4E-216 T 14-09-2016 IPR029015 D-3-phosphoglycerate dehydrogenase, type2 GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|UniPathway: UPA00135 AY555_RS09675 0f28e92bb77960df570f332550c679fa 223 SUPERFAMILY SSF48613 2 219 4.3E-64 T 14-09-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 AY555_RS09675 0f28e92bb77960df570f332550c679fa 223 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 10 220 4.0E-42 T 14-09-2016 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356|UniPathway: UPA00060 AY555_RS09675 0f28e92bb77960df570f332550c679fa 223 Gene3D G3DSA:1.20.910.10 2 221 5.6E-70 T 14-09-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 AY555_RS09675 0f28e92bb77960df570f332550c679fa 223 PANTHER PTHR20858:SF17 8 180 4.2E-63 T 14-09-2016 AY555_RS09675 0f28e92bb77960df570f332550c679fa 223 PANTHER PTHR20858 8 180 4.2E-63 T 14-09-2016 AY555_RS09675 0f28e92bb77960df570f332550c679fa 223 Pfam PF03070 TENA/THI-4/PQQC family 7 220 1.8E-42 T 14-09-2016 IPR004305 Thiaminase-2/PQQC AY555_RS02205 ae6f34821f14e992869b43e25cc03db9 236 PIRSF PIRSF006293 3 234 5.9E-66 T 14-09-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 AY555_RS02205 ae6f34821f14e992869b43e25cc03db9 236 PANTHER PTHR11587:SF3 7 227 1.8E-71 T 14-09-2016 AY555_RS02205 ae6f34821f14e992869b43e25cc03db9 236 Gene3D G3DSA:3.40.50.620 6 229 2.8E-70 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS02205 ae6f34821f14e992869b43e25cc03db9 236 Pfam PF06508 Queuosine biosynthesis protein QueC 7 230 6.1E-69 T 14-09-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 AY555_RS02205 ae6f34821f14e992869b43e25cc03db9 236 PANTHER PTHR11587 7 227 1.8E-71 T 14-09-2016 AY555_RS02205 ae6f34821f14e992869b43e25cc03db9 236 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 7 223 1.7E-59 T 14-09-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 AY555_RS02205 ae6f34821f14e992869b43e25cc03db9 236 SUPERFAMILY SSF52402 7 230 3.26E-50 T 14-09-2016 AY555_RS02205 ae6f34821f14e992869b43e25cc03db9 236 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 5 235 47.87 T 14-09-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 AY555_RS02680 9ee1f8dc73609865f188ecddaf6ab9f5 576 Pfam PF00999 Sodium/hydrogen exchanger family 14 375 4.6E-64 T 14-09-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AY555_RS02680 9ee1f8dc73609865f188ecddaf6ab9f5 576 Gene3D G3DSA:3.40.50.720 403 536 1.4E-28 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS02680 9ee1f8dc73609865f188ecddaf6ab9f5 576 SUPERFAMILY SSF51735 407 542 8.25E-26 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS02680 9ee1f8dc73609865f188ecddaf6ab9f5 576 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 15 286 5.1E-75 T 14-09-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 AY555_RS02680 9ee1f8dc73609865f188ecddaf6ab9f5 576 PANTHER PTHR16254 8 564 3.1E-208 T 14-09-2016 AY555_RS02680 9ee1f8dc73609865f188ecddaf6ab9f5 576 PANTHER PTHR16254:SF6 8 564 3.1E-208 T 14-09-2016 AY555_RS02680 9ee1f8dc73609865f188ecddaf6ab9f5 576 Pfam PF02254 TrkA-N domain 410 522 1.0E-17 T 14-09-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AY555_RS07645 e61aea9bee19e5497216366e61ed2363 608 ProSitePatterns PS00211 ABC transporters family signature. 123 137 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AY555_RS07645 e61aea9bee19e5497216366e61ed2363 608 SMART SM00382 31 196 8.3E-15 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS07645 e61aea9bee19e5497216366e61ed2363 608 SMART SM00382 310 481 1.3E-15 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS07645 e61aea9bee19e5497216366e61ed2363 608 SUPERFAMILY SSF52540 5 198 3.12E-47 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS07645 e61aea9bee19e5497216366e61ed2363 608 ProSitePatterns PS00211 ABC transporters family signature. 408 422 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AY555_RS07645 e61aea9bee19e5497216366e61ed2363 608 SUPERFAMILY SSF52540 280 487 1.88E-45 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS07645 e61aea9bee19e5497216366e61ed2363 608 Pfam PF16326 ABC transporter C-terminal domain 526 594 6.3E-15 T 14-09-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 AY555_RS07645 e61aea9bee19e5497216366e61ed2363 608 Gene3D G3DSA:3.40.50.300 5 199 3.9E-46 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS07645 e61aea9bee19e5497216366e61ed2363 608 Gene3D G3DSA:3.40.50.300 285 493 1.2E-41 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS07645 e61aea9bee19e5497216366e61ed2363 608 PANTHER PTHR19211 510 549 8.5E-169 T 14-09-2016 AY555_RS07645 e61aea9bee19e5497216366e61ed2363 608 PANTHER PTHR19211 7 494 8.5E-169 T 14-09-2016 AY555_RS07645 e61aea9bee19e5497216366e61ed2363 608 Pfam PF00005 ABC transporter 302 436 2.3E-22 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AY555_RS07645 e61aea9bee19e5497216366e61ed2363 608 Pfam PF00005 ABC transporter 23 151 3.9E-24 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AY555_RS09260 f049a0e1e44862bc69f0775c2faa8189 211 Pfam PF02470 MlaD protein 57 133 2.5E-17 T 14-09-2016 IPR003399 Mce/MlaD AY555_RS09260 f049a0e1e44862bc69f0775c2faa8189 211 PANTHER PTHR33371 11 167 6.0E-23 T 14-09-2016 AY555_RS09290 8573968b7a538f80bd61ef097a4314e7 406 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 244 253 - T 14-09-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 AY555_RS09290 8573968b7a538f80bd61ef097a4314e7 406 PANTHER PTHR13693:SF57 2 400 1.8E-221 T 14-09-2016 AY555_RS09290 8573968b7a538f80bd61ef097a4314e7 406 PANTHER PTHR13693 2 400 1.8E-221 T 14-09-2016 AY555_RS09290 8573968b7a538f80bd61ef097a4314e7 406 SUPERFAMILY SSF53383 2 398 1.02E-113 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AY555_RS09290 8573968b7a538f80bd61ef097a4314e7 406 Pfam PF00155 Aminotransferase class I and II 46 390 1.7E-76 T 14-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AY555_RS09290 8573968b7a538f80bd61ef097a4314e7 406 Gene3D G3DSA:3.40.640.10 64 281 3.7E-85 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AY555_RS09290 8573968b7a538f80bd61ef097a4314e7 406 Gene3D G3DSA:3.90.1150.10 282 395 3.3E-32 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AY555_RS09290 8573968b7a538f80bd61ef097a4314e7 406 TIGRFAM TIGR01821 5aminolev_synth: 5-aminolevulinic acid synthase 1 400 2.1E-191 T 14-09-2016 IPR010961 Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase GO:0003870|GO:0030170|GO:0033014 KEGG: 00260+2.3.1.37|KEGG: 00860+2.3.1.37|MetaCyc: PWY-5189|MetaCyc: PWY-7536|Reactome: REACT_9431|UniPathway: UPA00251 AY555_RS04170 36db062fc773231bb370b958a83f88d0 389 Pfam PF02772 S-adenosylmethionine synthetase, central domain 118 232 8.4E-36 T 14-09-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AY555_RS04170 36db062fc773231bb370b958a83f88d0 389 PANTHER PTHR11964 3 382 1.6E-193 T 14-09-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AY555_RS04170 36db062fc773231bb370b958a83f88d0 389 SUPERFAMILY SSF55973 114 233 3.37E-41 T 14-09-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AY555_RS04170 36db062fc773231bb370b958a83f88d0 389 Gene3D G3DSA:3.30.300.10 136 234 5.9E-30 T 14-09-2016 AY555_RS04170 36db062fc773231bb370b958a83f88d0 389 SUPERFAMILY SSF55973 5 111 3.41E-39 T 14-09-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AY555_RS04170 36db062fc773231bb370b958a83f88d0 389 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 4 387 48.479 T 14-09-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AY555_RS04170 36db062fc773231bb370b958a83f88d0 389 Gene3D G3DSA:3.30.300.10 13 135 1.5E-38 T 14-09-2016 AY555_RS04170 36db062fc773231bb370b958a83f88d0 389 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 260 268 - T 14-09-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AY555_RS04170 36db062fc773231bb370b958a83f88d0 389 PANTHER PTHR11964:SF1 3 382 1.6E-193 T 14-09-2016 AY555_RS04170 36db062fc773231bb370b958a83f88d0 389 Gene3D G3DSA:3.30.300.10 245 387 3.6E-65 T 14-09-2016 AY555_RS04170 36db062fc773231bb370b958a83f88d0 389 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 7 385 2.3E-149 T 14-09-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AY555_RS04170 36db062fc773231bb370b958a83f88d0 389 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 119 129 - T 14-09-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AY555_RS04170 36db062fc773231bb370b958a83f88d0 389 PIRSF PIRSF000497 1 388 5.8E-158 T 14-09-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AY555_RS04170 36db062fc773231bb370b958a83f88d0 389 SUPERFAMILY SSF55973 234 387 1.41E-64 T 14-09-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AY555_RS04170 36db062fc773231bb370b958a83f88d0 389 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 6 103 8.8E-38 T 14-09-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AY555_RS04170 36db062fc773231bb370b958a83f88d0 389 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 234 376 3.2E-64 T 14-09-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AY555_RS00685 1b2cb313bc5d26445bd61838019548ed 439 SUPERFAMILY SSF48179 201 298 6.12E-33 T 14-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AY555_RS00685 1b2cb313bc5d26445bd61838019548ed 439 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 184 7.3E-70 T 14-09-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 AY555_RS00685 1b2cb313bc5d26445bd61838019548ed 439 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 414 3.4E-140 T 14-09-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 AY555_RS00685 1b2cb313bc5d26445bd61838019548ed 439 PIRSF PIRSF500134 1 436 6.4E-185 T 14-09-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 AY555_RS00685 1b2cb313bc5d26445bd61838019548ed 439 Gene3D G3DSA:3.40.50.720 232 436 3.1E-75 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS00685 1b2cb313bc5d26445bd61838019548ed 439 SUPERFAMILY SSF51735 1 188 3.24E-55 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS00685 1b2cb313bc5d26445bd61838019548ed 439 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 201 293 1.5E-37 T 14-09-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 AY555_RS00685 1b2cb313bc5d26445bd61838019548ed 439 PANTHER PTHR11374:SF18 1 438 2.1E-236 T 14-09-2016 AY555_RS00685 1b2cb313bc5d26445bd61838019548ed 439 Gene3D G3DSA:3.40.50.720 1 203 7.8E-79 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS00685 1b2cb313bc5d26445bd61838019548ed 439 PIRSF PIRSF000124 1 433 4.4E-146 T 14-09-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 AY555_RS00685 1b2cb313bc5d26445bd61838019548ed 439 SUPERFAMILY SSF52413 304 428 1.22E-38 T 14-09-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 AY555_RS00685 1b2cb313bc5d26445bd61838019548ed 439 Gene3D G3DSA:1.20.5.100 204 231 5.0E-18 T 14-09-2016 AY555_RS00685 1b2cb313bc5d26445bd61838019548ed 439 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 317 418 2.5E-31 T 14-09-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 AY555_RS00685 1b2cb313bc5d26445bd61838019548ed 439 PANTHER PTHR11374 1 438 2.1E-236 T 14-09-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 AY555_RS00685 1b2cb313bc5d26445bd61838019548ed 439 SMART SM00984 317 418 1.8E-47 T 14-09-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 AY555_RS06785 9c45ccb9591a21068f5b0b68b6f93561 258 PIRSF PIRSF005578 10 257 1.1E-97 T 14-09-2016 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 AY555_RS06785 9c45ccb9591a21068f5b0b68b6f93561 258 Gene3D G3DSA:3.40.50.150 102 187 4.6E-13 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS06785 9c45ccb9591a21068f5b0b68b6f93561 258 SMART SM00363 15 77 3.1E-10 T 14-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 AY555_RS06785 9c45ccb9591a21068f5b0b68b6f93561 258 Pfam PF01728 FtsJ-like methyltransferase 71 253 8.1E-24 T 14-09-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AY555_RS06785 9c45ccb9591a21068f5b0b68b6f93561 258 SUPERFAMILY SSF53335 70 254 6.09E-28 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS06785 9c45ccb9591a21068f5b0b68b6f93561 258 SUPERFAMILY SSF55174 14 70 1.1E-13 T 14-09-2016 AY555_RS06785 9c45ccb9591a21068f5b0b68b6f93561 258 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 16 248 1.2E-71 T 14-09-2016 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 AY555_RS06785 9c45ccb9591a21068f5b0b68b6f93561 258 Pfam PF01479 S4 domain 15 59 3.5E-11 T 14-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 AY555_RS06785 9c45ccb9591a21068f5b0b68b6f93561 258 PANTHER PTHR32319 9 255 7.0E-122 T 14-09-2016 AY555_RS06785 9c45ccb9591a21068f5b0b68b6f93561 258 PANTHER PTHR32319:SF0 9 255 7.0E-122 T 14-09-2016 AY555_RS06785 9c45ccb9591a21068f5b0b68b6f93561 258 Gene3D G3DSA:3.10.290.10 15 101 1.6E-22 T 14-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 AY555_RS08450 6156a3aca26772ec1b4f6a321df6f806 310 Pfam PF05036 Sporulation related domain 235 301 2.5E-18 T 14-09-2016 IPR007730 Sporulation-related domain GO:0042834 AY555_RS08450 6156a3aca26772ec1b4f6a321df6f806 310 PANTHER PTHR34183 231 310 6.1E-69 T 14-09-2016 AY555_RS08450 6156a3aca26772ec1b4f6a321df6f806 310 PANTHER PTHR34183 43 214 6.1E-69 T 14-09-2016 AY555_RS08450 6156a3aca26772ec1b4f6a321df6f806 310 PANTHER PTHR34183:SF1 231 310 6.1E-69 T 14-09-2016 AY555_RS08450 6156a3aca26772ec1b4f6a321df6f806 310 PANTHER PTHR34183:SF1 43 214 6.1E-69 T 14-09-2016 AY555_RS08450 6156a3aca26772ec1b4f6a321df6f806 310 Gene3D G3DSA:3.30.70.1070 233 303 8.4E-16 T 14-09-2016 IPR007730 Sporulation-related domain GO:0042834 AY555_RS08450 6156a3aca26772ec1b4f6a321df6f806 310 SUPERFAMILY SSF50685 50 151 3.66E-9 T 14-09-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain AY555_RS08450 6156a3aca26772ec1b4f6a321df6f806 310 Pfam PF03330 Lytic transglycolase 62 151 4.0E-23 T 14-09-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain AY555_RS08450 6156a3aca26772ec1b4f6a321df6f806 310 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 64 158 6.0E-42 T 14-09-2016 IPR012997 Rare lipoprotein A AY555_RS08450 6156a3aca26772ec1b4f6a321df6f806 310 SUPERFAMILY SSF110997 235 307 9.94E-15 T 14-09-2016 IPR007730 Sporulation-related domain GO:0042834 AY555_RS07235 36f303d45d7a46c124261eedf2690246 551 Pfam PF01627 Hpt domain 25 105 6.8E-7 T 14-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AY555_RS07235 36f303d45d7a46c124261eedf2690246 551 Pfam PF00990 Diguanylate cyclase, GGDEF domain 387 540 6.9E-43 T 14-09-2016 IPR000160 GGDEF domain AY555_RS07235 36f303d45d7a46c124261eedf2690246 551 Gene3D G3DSA:3.40.50.2300 258 381 1.4E-29 T 14-09-2016 AY555_RS07235 36f303d45d7a46c124261eedf2690246 551 SMART SM00267 374 545 6.6E-57 T 14-09-2016 IPR000160 GGDEF domain AY555_RS07235 36f303d45d7a46c124261eedf2690246 551 Pfam PF00072 Response regulator receiver domain 260 371 1.7E-21 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS07235 36f303d45d7a46c124261eedf2690246 551 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 382 543 1.2E-42 T 14-09-2016 IPR000160 GGDEF domain AY555_RS07235 36f303d45d7a46c124261eedf2690246 551 SUPERFAMILY SSF47226 45 107 7.07E-8 T 14-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AY555_RS07235 36f303d45d7a46c124261eedf2690246 551 SMART SM00448 258 371 6.5E-27 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS07235 36f303d45d7a46c124261eedf2690246 551 PANTHER PTHR10799 418 543 1.5E-30 T 14-09-2016 AY555_RS07235 36f303d45d7a46c124261eedf2690246 551 PANTHER PTHR10799:SF750 418 543 1.5E-30 T 14-09-2016 AY555_RS07235 36f303d45d7a46c124261eedf2690246 551 PANTHER PTHR10799 233 381 1.5E-30 T 14-09-2016 AY555_RS07235 36f303d45d7a46c124261eedf2690246 551 PANTHER PTHR10799:SF750 233 381 1.5E-30 T 14-09-2016 AY555_RS07235 36f303d45d7a46c124261eedf2690246 551 Gene3D G3DSA:1.20.120.160 42 106 1.2E-8 T 14-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AY555_RS07235 36f303d45d7a46c124261eedf2690246 551 SUPERFAMILY SSF52172 258 385 4.84E-31 T 14-09-2016 IPR011006 CheY-like superfamily AY555_RS07235 36f303d45d7a46c124261eedf2690246 551 Gene3D G3DSA:3.30.70.270 387 542 9.4E-50 T 14-09-2016 AY555_RS07235 36f303d45d7a46c124261eedf2690246 551 SUPERFAMILY SSF55073 390 543 3.61E-45 T 14-09-2016 IPR029787 Nucleotide cyclase AY555_RS08185 ae065b787acf7f0ac15113e5108583aa 182 PANTHER PTHR11078 12 175 2.9E-19 T 14-09-2016 IPR011605 NusB antitermination factor GO:0006353 AY555_RS08185 ae065b787acf7f0ac15113e5108583aa 182 SUPERFAMILY SSF48013 12 164 6.67E-27 T 14-09-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AY555_RS08185 ae065b787acf7f0ac15113e5108583aa 182 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 10 162 16.876 T 14-09-2016 IPR011605 NusB antitermination factor GO:0006353 AY555_RS08185 ae065b787acf7f0ac15113e5108583aa 182 Pfam PF01029 NusB family 15 159 6.7E-20 T 14-09-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AY555_RS08185 ae065b787acf7f0ac15113e5108583aa 182 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 13 160 9.7E-29 T 14-09-2016 IPR011605 NusB antitermination factor GO:0006353 AY555_RS08185 ae065b787acf7f0ac15113e5108583aa 182 Gene3D G3DSA:1.10.940.10 11 166 1.7E-28 T 14-09-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AY555_RS04390 2838ca620f2cbeca46bdf57a995a3758 809 Gene3D G3DSA:3.40.50.670 414 560 7.0E-93 T 14-09-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS04390 2838ca620f2cbeca46bdf57a995a3758 809 Gene3D G3DSA:3.40.50.670 726 791 7.0E-93 T 14-09-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS04390 2838ca620f2cbeca46bdf57a995a3758 809 PANTHER PTHR10169 1 563 2.6E-291 T 14-09-2016 AY555_RS04390 2838ca620f2cbeca46bdf57a995a3758 809 PANTHER PTHR10169 726 809 2.6E-291 T 14-09-2016 AY555_RS04390 2838ca620f2cbeca46bdf57a995a3758 809 SUPERFAMILY SSF56719 404 570 2.88E-86 T 14-09-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 AY555_RS04390 2838ca620f2cbeca46bdf57a995a3758 809 SUPERFAMILY SSF56719 735 801 2.88E-86 T 14-09-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 AY555_RS04390 2838ca620f2cbeca46bdf57a995a3758 809 PRINTS PR00418 DNA topoisomerase II family signature 43 58 5.7E-70 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS04390 2838ca620f2cbeca46bdf57a995a3758 809 PRINTS PR00418 DNA topoisomerase II family signature 741 757 5.7E-70 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS04390 2838ca620f2cbeca46bdf57a995a3758 809 PRINTS PR00418 DNA topoisomerase II family signature 278 291 5.7E-70 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS04390 2838ca620f2cbeca46bdf57a995a3758 809 PRINTS PR00418 DNA topoisomerase II family signature 535 547 5.7E-70 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS04390 2838ca620f2cbeca46bdf57a995a3758 809 PRINTS PR00418 DNA topoisomerase II family signature 121 135 5.7E-70 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS04390 2838ca620f2cbeca46bdf57a995a3758 809 PRINTS PR00418 DNA topoisomerase II family signature 78 91 5.7E-70 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS04390 2838ca620f2cbeca46bdf57a995a3758 809 PRINTS PR00418 DNA topoisomerase II family signature 430 444 5.7E-70 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS04390 2838ca620f2cbeca46bdf57a995a3758 809 PRINTS PR00418 DNA topoisomerase II family signature 515 532 5.7E-70 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS04390 2838ca620f2cbeca46bdf57a995a3758 809 PRINTS PR00418 DNA topoisomerase II family signature 497 513 5.7E-70 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS04390 2838ca620f2cbeca46bdf57a995a3758 809 PRINTS PR01159 DNA gyrase subunit B signature 189 204 5.4E-67 T 14-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS04390 2838ca620f2cbeca46bdf57a995a3758 809 PRINTS PR01159 DNA gyrase subunit B signature 384 404 5.4E-67 T 14-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS04390 2838ca620f2cbeca46bdf57a995a3758 809 PRINTS PR01159 DNA gyrase subunit B signature 762 774 5.4E-67 T 14-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS04390 2838ca620f2cbeca46bdf57a995a3758 809 PRINTS PR01159 DNA gyrase subunit B signature 13 23 5.4E-67 T 14-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS04390 2838ca620f2cbeca46bdf57a995a3758 809 PRINTS PR01159 DNA gyrase subunit B signature 322 338 5.4E-67 T 14-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS04390 2838ca620f2cbeca46bdf57a995a3758 809 PRINTS PR01159 DNA gyrase subunit B signature 370 384 5.4E-67 T 14-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS04390 2838ca620f2cbeca46bdf57a995a3758 809 PRINTS PR01159 DNA gyrase subunit B signature 204 217 5.4E-67 T 14-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS04390 2838ca620f2cbeca46bdf57a995a3758 809 PRINTS PR01159 DNA gyrase subunit B signature 230 252 5.4E-67 T 14-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS04390 2838ca620f2cbeca46bdf57a995a3758 809 PRINTS PR01159 DNA gyrase subunit B signature 778 794 5.4E-67 T 14-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS04390 2838ca620f2cbeca46bdf57a995a3758 809 PRINTS PR01159 DNA gyrase subunit B signature 480 489 5.4E-67 T 14-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS04390 2838ca620f2cbeca46bdf57a995a3758 809 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 737 798 5.2E-28 T 14-09-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS04390 2838ca620f2cbeca46bdf57a995a3758 809 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 13 809 1.3E-299 T 14-09-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AY555_RS04390 2838ca620f2cbeca46bdf57a995a3758 809 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 40 180 1.0E-23 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS04390 2838ca620f2cbeca46bdf57a995a3758 809 Pfam PF00204 DNA gyrase B 231 400 1.8E-58 T 14-09-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS04390 2838ca620f2cbeca46bdf57a995a3758 809 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 10 809 101.462 T 14-09-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AY555_RS04390 2838ca620f2cbeca46bdf57a995a3758 809 SMART SM00387 39 184 6.0E-28 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS04390 2838ca620f2cbeca46bdf57a995a3758 809 SUPERFAMILY SSF54211 231 401 1.37E-56 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AY555_RS04390 2838ca620f2cbeca46bdf57a995a3758 809 Gene3D G3DSA:3.30.230.10 230 402 3.6E-72 T 14-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AY555_RS04390 2838ca620f2cbeca46bdf57a995a3758 809 Pfam PF01751 Toprim domain 429 541 5.4E-18 T 14-09-2016 IPR006171 Toprim domain AY555_RS04390 2838ca620f2cbeca46bdf57a995a3758 809 ProSitePatterns PS00177 DNA topoisomerase II signature. 432 440 - T 14-09-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS04390 2838ca620f2cbeca46bdf57a995a3758 809 SUPERFAMILY SSF55874 13 222 9.82E-70 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS04390 2838ca620f2cbeca46bdf57a995a3758 809 Gene3D G3DSA:3.30.565.10 13 222 2.3E-87 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS04390 2838ca620f2cbeca46bdf57a995a3758 809 SMART SM00433 43 802 1.6E-258 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS04815 87954f3a9cc8da156b07f9102786618f 743 TIGRFAM TIGR00595 priA: primosomal protein N' 232 740 3.0E-191 T 14-09-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AY555_RS04815 87954f3a9cc8da156b07f9102786618f 743 Gene3D G3DSA:3.40.50.300 208 375 4.1E-33 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04815 87954f3a9cc8da156b07f9102786618f 743 Hamap MF_00983 Probable primosomal protein N' [priA]. 21 742 23.873 T 14-09-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AY555_RS04815 87954f3a9cc8da156b07f9102786618f 743 SUPERFAMILY SSF52540 401 456 2.77E-37 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04815 87954f3a9cc8da156b07f9102786618f 743 SUPERFAMILY SSF52540 221 372 2.77E-37 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04815 87954f3a9cc8da156b07f9102786618f 743 SUPERFAMILY SSF52540 520 616 2.77E-37 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04815 87954f3a9cc8da156b07f9102786618f 743 Pfam PF00270 DEAD/DEAH box helicase 228 374 5.0E-11 T 14-09-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AY555_RS04815 87954f3a9cc8da156b07f9102786618f 743 SMART SM00490 513 606 7.3E-4 T 14-09-2016 IPR001650 Helicase, C-terminal AY555_RS04815 87954f3a9cc8da156b07f9102786618f 743 Gene3D G3DSA:3.40.50.300 423 444 9.2E-23 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04815 87954f3a9cc8da156b07f9102786618f 743 Gene3D G3DSA:3.40.50.300 510 650 9.2E-23 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04815 87954f3a9cc8da156b07f9102786618f 743 PANTHER PTHR30580 9 743 3.2E-209 T 14-09-2016 AY555_RS04815 87954f3a9cc8da156b07f9102786618f 743 Pfam PF00271 Helicase conserved C-terminal domain 541 605 7.3E-5 T 14-09-2016 IPR001650 Helicase, C-terminal AY555_RS04815 87954f3a9cc8da156b07f9102786618f 743 SMART SM00487 204 402 5.0E-22 T 14-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AY555_RS02595 476140aa9755a8b7407f520160ec30f3 310 Gene3D G3DSA:3.90.550.10 1 136 8.8E-28 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AY555_RS02595 476140aa9755a8b7407f520160ec30f3 310 SUPERFAMILY SSF53448 3 209 1.5E-27 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AY555_RS02595 476140aa9755a8b7407f520160ec30f3 310 PANTHER PTHR22916 1 111 8.0E-24 T 14-09-2016 AY555_RS02595 476140aa9755a8b7407f520160ec30f3 310 Pfam PF00535 Glycosyl transferase family 2 6 107 8.0E-23 T 14-09-2016 IPR001173 Glycosyltransferase 2-like AY555_RS00945 cd2ba278d91dac20e72c0430dd28384a 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 14-09-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 AY555_RS00945 cd2ba278d91dac20e72c0430dd28384a 92 PIRSF PIRSF002144 1 92 6.0E-31 T 14-09-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 AY555_RS00945 cd2ba278d91dac20e72c0430dd28384a 92 Gene3D G3DSA:3.30.860.10 2 91 4.8E-38 T 14-09-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 AY555_RS00945 cd2ba278d91dac20e72c0430dd28384a 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.0E-21 T 14-09-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 AY555_RS00945 cd2ba278d91dac20e72c0430dd28384a 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.0E-21 T 14-09-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 AY555_RS00945 cd2ba278d91dac20e72c0430dd28384a 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.0E-21 T 14-09-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 AY555_RS00945 cd2ba278d91dac20e72c0430dd28384a 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 23.733 T 14-09-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 AY555_RS00945 cd2ba278d91dac20e72c0430dd28384a 92 Pfam PF00203 Ribosomal protein S19 3 83 7.0E-34 T 14-09-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 AY555_RS00945 cd2ba278d91dac20e72c0430dd28384a 92 SUPERFAMILY SSF54570 3 84 4.19E-33 T 14-09-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 AY555_RS00945 cd2ba278d91dac20e72c0430dd28384a 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 2 91 4.4E-40 T 14-09-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 AY555_RS00945 cd2ba278d91dac20e72c0430dd28384a 92 PANTHER PTHR11880 2 92 2.2E-43 T 14-09-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 AY555_RS07670 b5933a16c0d2ddb988a39c7d659728ce 153 Pfam PF09335 SNARE associated Golgi protein 3 118 3.4E-15 T 14-09-2016 IPR032816 SNARE associated Golgi protein AY555_RS07670 b5933a16c0d2ddb988a39c7d659728ce 153 PANTHER PTHR30353 1 153 2.6E-38 T 14-09-2016 IPR032818 DedA family AY555_RS07670 b5933a16c0d2ddb988a39c7d659728ce 153 PANTHER PTHR30353:SF8 1 153 2.6E-38 T 14-09-2016 AY555_RS07225 fc370fb0c40437e4bf9004e77c472334 905 SUPERFAMILY SSF55874 720 887 1.14E-46 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS07225 fc370fb0c40437e4bf9004e77c472334 905 SUPERFAMILY SSF55785 302 396 7.12E-13 T 14-09-2016 IPR000014 PAS domain AY555_RS07225 fc370fb0c40437e4bf9004e77c472334 905 PRINTS PR00344 Bacterial sensor protein C-terminal signature 873 886 1.5E-17 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS07225 fc370fb0c40437e4bf9004e77c472334 905 PRINTS PR00344 Bacterial sensor protein C-terminal signature 832 842 1.5E-17 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS07225 fc370fb0c40437e4bf9004e77c472334 905 PRINTS PR00344 Bacterial sensor protein C-terminal signature 849 867 1.5E-17 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS07225 fc370fb0c40437e4bf9004e77c472334 905 PRINTS PR00344 Bacterial sensor protein C-terminal signature 814 828 1.5E-17 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS07225 fc370fb0c40437e4bf9004e77c472334 905 SUPERFAMILY SSF47384 647 732 6.47E-21 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS07225 fc370fb0c40437e4bf9004e77c472334 905 Gene3D G3DSA:3.30.450.20 424 526 6.7E-21 T 14-09-2016 AY555_RS07225 fc370fb0c40437e4bf9004e77c472334 905 Gene3D G3DSA:1.10.287.130 656 717 1.3E-19 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS07225 fc370fb0c40437e4bf9004e77c472334 905 PANTHER PTHR24423 396 886 6.8E-132 T 14-09-2016 AY555_RS07225 fc370fb0c40437e4bf9004e77c472334 905 SUPERFAMILY SSF55785 526 655 7.15E-30 T 14-09-2016 IPR000014 PAS domain AY555_RS07225 fc370fb0c40437e4bf9004e77c472334 905 Pfam PF13426 PAS domain 434 528 6.7E-5 T 14-09-2016 IPR000014 PAS domain AY555_RS07225 fc370fb0c40437e4bf9004e77c472334 905 Pfam PF13426 PAS domain 552 656 3.8E-16 T 14-09-2016 IPR000014 PAS domain AY555_RS07225 fc370fb0c40437e4bf9004e77c472334 905 SMART SM00387 777 889 5.0E-37 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS07225 fc370fb0c40437e4bf9004e77c472334 905 SUPERFAMILY SSF55785 404 527 1.82E-19 T 14-09-2016 IPR000014 PAS domain AY555_RS07225 fc370fb0c40437e4bf9004e77c472334 905 Gene3D G3DSA:3.30.450.20 76 171 7.9E-11 T 14-09-2016 AY555_RS07225 fc370fb0c40437e4bf9004e77c472334 905 Gene3D G3DSA:3.30.450.20 527 655 4.7E-31 T 14-09-2016 AY555_RS07225 fc370fb0c40437e4bf9004e77c472334 905 Gene3D G3DSA:3.30.565.10 718 889 4.7E-48 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS07225 fc370fb0c40437e4bf9004e77c472334 905 SMART SM00091 541 607 1.1E-12 T 14-09-2016 IPR000014 PAS domain AY555_RS07225 fc370fb0c40437e4bf9004e77c472334 905 SMART SM00091 299 365 1.2E-8 T 14-09-2016 IPR000014 PAS domain AY555_RS07225 fc370fb0c40437e4bf9004e77c472334 905 SMART SM00091 419 485 2.9E-5 T 14-09-2016 IPR000014 PAS domain AY555_RS07225 fc370fb0c40437e4bf9004e77c472334 905 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 777 886 4.9E-26 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS07225 fc370fb0c40437e4bf9004e77c472334 905 SMART SM00086 487 529 0.0053 T 14-09-2016 IPR001610 PAC motif AY555_RS07225 fc370fb0c40437e4bf9004e77c472334 905 SMART SM00086 617 657 6.9E-4 T 14-09-2016 IPR001610 PAC motif AY555_RS07225 fc370fb0c40437e4bf9004e77c472334 905 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 302 414 1.0E-8 T 14-09-2016 IPR000014 PAS domain AY555_RS07225 fc370fb0c40437e4bf9004e77c472334 905 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 537 662 3.2E-32 T 14-09-2016 IPR000014 PAS domain AY555_RS07225 fc370fb0c40437e4bf9004e77c472334 905 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 415 536 1.2E-12 T 14-09-2016 IPR000014 PAS domain AY555_RS07225 fc370fb0c40437e4bf9004e77c472334 905 Pfam PF08448 PAS fold 305 407 6.9E-10 T 14-09-2016 IPR013656 PAS fold-4 AY555_RS07225 fc370fb0c40437e4bf9004e77c472334 905 Pfam PF00512 His Kinase A (phospho-acceptor) domain 663 731 9.6E-18 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS07225 fc370fb0c40437e4bf9004e77c472334 905 Gene3D G3DSA:3.30.450.20 302 423 5.8E-15 T 14-09-2016 AY555_RS07225 fc370fb0c40437e4bf9004e77c472334 905 SMART SM00388 663 731 3.4E-19 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS03980 f514c3a39bec22d3fcee26e8e3bfd43c 350 Pfam PF09898 Uncharacterized protein conserved in bacteria (DUF2125) 24 332 2.1E-34 T 14-09-2016 IPR018666 Protein of unknown function DUF2125 AY555_RS05275 a194af55ccc45be643e60599a66cfdbb 284 PANTHER PTHR20881 17 272 2.6E-126 T 14-09-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 AY555_RS05275 a194af55ccc45be643e60599a66cfdbb 284 Pfam PF02548 Ketopantoate hydroxymethyltransferase 18 264 1.2E-102 T 14-09-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 AY555_RS05275 a194af55ccc45be643e60599a66cfdbb 284 Gene3D G3DSA:3.20.20.60 10 269 1.8E-106 T 14-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AY555_RS05275 a194af55ccc45be643e60599a66cfdbb 284 PIRSF PIRSF000388 1 272 2.1E-101 T 14-09-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 AY555_RS05275 a194af55ccc45be643e60599a66cfdbb 284 SUPERFAMILY SSF51621 15 269 4.71E-97 T 14-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AY555_RS05275 a194af55ccc45be643e60599a66cfdbb 284 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 10 269 40.372 T 14-09-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 AY555_RS05275 a194af55ccc45be643e60599a66cfdbb 284 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 17 269 4.8E-91 T 14-09-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 AY555_RS04905 38271e422210be4c179bd4e8eba7c2ac 205 PANTHER PTHR17224 1 194 1.5E-70 T 14-09-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AY555_RS04905 38271e422210be4c179bd4e8eba7c2ac 205 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 2 182 1.6E-50 T 14-09-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AY555_RS04905 38271e422210be4c179bd4e8eba7c2ac 205 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 14-09-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 AY555_RS04905 38271e422210be4c179bd4e8eba7c2ac 205 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 177 32.851 T 14-09-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AY555_RS04905 38271e422210be4c179bd4e8eba7c2ac 205 Gene3D G3DSA:3.40.50.1470 1 184 3.6E-67 T 14-09-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AY555_RS04905 38271e422210be4c179bd4e8eba7c2ac 205 PANTHER PTHR17224:SF1 1 194 1.5E-70 T 14-09-2016 AY555_RS04905 38271e422210be4c179bd4e8eba7c2ac 205 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 107 117 - T 14-09-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 AY555_RS04905 38271e422210be4c179bd4e8eba7c2ac 205 SUPERFAMILY SSF53178 1 184 1.7E-65 T 14-09-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AY555_RS04905 38271e422210be4c179bd4e8eba7c2ac 205 Pfam PF01195 Peptidyl-tRNA hydrolase 3 173 8.1E-51 T 14-09-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AY555_RS05345 23380ee5627dcf6de298ad432d9c010b 936 Gene3D G3DSA:3.40.50.620 14 204 7.6E-134 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS05345 23380ee5627dcf6de298ad432d9c010b 936 Gene3D G3DSA:3.40.50.620 414 645 7.6E-134 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS05345 23380ee5627dcf6de298ad432d9c010b 936 SUPERFAMILY SSF47323 660 932 1.79E-61 T 14-09-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS05345 23380ee5627dcf6de298ad432d9c010b 936 SUPERFAMILY SSF50677 207 411 3.03E-44 T 14-09-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 AY555_RS05345 23380ee5627dcf6de298ad432d9c010b 936 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 569 578 1.8E-30 T 14-09-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 AY555_RS05345 23380ee5627dcf6de298ad432d9c010b 936 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 535 548 1.8E-30 T 14-09-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 AY555_RS05345 23380ee5627dcf6de298ad432d9c010b 936 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 234 257 1.8E-30 T 14-09-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 AY555_RS05345 23380ee5627dcf6de298ad432d9c010b 936 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 409 424 1.8E-30 T 14-09-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 AY555_RS05345 23380ee5627dcf6de298ad432d9c010b 936 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 52 63 1.8E-30 T 14-09-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 AY555_RS05345 23380ee5627dcf6de298ad432d9c010b 936 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 3 931 19.829 T 14-09-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 AY555_RS05345 23380ee5627dcf6de298ad432d9c010b 936 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 30 648 1.1E-193 T 14-09-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS05345 23380ee5627dcf6de298ad432d9c010b 936 PANTHER PTHR11946:SF11 7 255 0.0 T 14-09-2016 AY555_RS05345 23380ee5627dcf6de298ad432d9c010b 936 PANTHER PTHR11946:SF11 288 853 0.0 T 14-09-2016 AY555_RS05345 23380ee5627dcf6de298ad432d9c010b 936 SUPERFAMILY SSF52374 411 656 6.84E-132 T 14-09-2016 AY555_RS05345 23380ee5627dcf6de298ad432d9c010b 936 SUPERFAMILY SSF52374 4 206 6.84E-132 T 14-09-2016 AY555_RS05345 23380ee5627dcf6de298ad432d9c010b 936 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 16 846 1.9E-250 T 14-09-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 AY555_RS05345 23380ee5627dcf6de298ad432d9c010b 936 Pfam PF08264 Anticodon-binding domain of tRNA 693 847 9.5E-24 T 14-09-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 AY555_RS05345 23380ee5627dcf6de298ad432d9c010b 936 Gene3D G3DSA:3.90.740.10 209 397 2.5E-46 T 14-09-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 AY555_RS05345 23380ee5627dcf6de298ad432d9c010b 936 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 59 70 - T 14-09-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS05345 23380ee5627dcf6de298ad432d9c010b 936 PANTHER PTHR11946 7 255 0.0 T 14-09-2016 AY555_RS05345 23380ee5627dcf6de298ad432d9c010b 936 PANTHER PTHR11946 288 853 0.0 T 14-09-2016 AY555_RS05345 23380ee5627dcf6de298ad432d9c010b 936 Gene3D G3DSA:1.10.730.10 651 833 5.7E-38 T 14-09-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS03695 a1361a9593dbb87180696e595ea6dff6 389 Gene3D G3DSA:3.80.30.20 10 207 9.1E-25 T 14-09-2016 IPR023404 Radical SAM, alpha/beta horseshoe AY555_RS03695 a1361a9593dbb87180696e595ea6dff6 389 SUPERFAMILY SSF102114 8 385 1.57E-97 T 14-09-2016 AY555_RS03695 a1361a9593dbb87180696e595ea6dff6 389 PANTHER PTHR13932 8 386 1.9E-125 T 14-09-2016 AY555_RS03695 a1361a9593dbb87180696e595ea6dff6 389 Pfam PF04055 Radical SAM superfamily 12 179 1.1E-21 T 14-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AY555_RS03695 a1361a9593dbb87180696e595ea6dff6 389 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 10 335 5.5E-79 T 14-09-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- AY555_RS03695 a1361a9593dbb87180696e595ea6dff6 389 SMART SM00729 7 227 6.3E-42 T 14-09-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AY555_RS03695 a1361a9593dbb87180696e595ea6dff6 389 Pfam PF06969 HemN C-terminal domain 310 375 6.3E-9 T 14-09-2016 IPR010723 HemN, C-terminal AY555_RS05905 2d9a4e053f843aaf3bdd750f6d72618a 200 PANTHER PTHR10851 7 200 2.1E-90 T 14-09-2016 AY555_RS05905 2d9a4e053f843aaf3bdd750f6d72618a 200 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 159 200 1.1E-18 T 14-09-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AY555_RS05905 2d9a4e053f843aaf3bdd750f6d72618a 200 Gene3D G3DSA:2.30.110.10 9 200 5.7E-79 T 14-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AY555_RS05905 2d9a4e053f843aaf3bdd750f6d72618a 200 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 3 200 37.821 T 14-09-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AY555_RS05905 2d9a4e053f843aaf3bdd750f6d72618a 200 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 27 106 5.3E-26 T 14-09-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AY555_RS05905 2d9a4e053f843aaf3bdd750f6d72618a 200 SUPERFAMILY SSF50475 10 200 3.18E-63 T 14-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AY555_RS05905 2d9a4e053f843aaf3bdd750f6d72618a 200 PIRSF PIRSF000190 2 200 5.5E-72 T 14-09-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AY555_RS05905 2d9a4e053f843aaf3bdd750f6d72618a 200 PANTHER PTHR10851:SF0 7 200 2.1E-90 T 14-09-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AY555_RS05905 2d9a4e053f843aaf3bdd750f6d72618a 200 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 9 200 3.1E-72 T 14-09-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AY555_RS05905 2d9a4e053f843aaf3bdd750f6d72618a 200 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 169 182 - T 14-09-2016 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AY555_RS01380 09cc1bb73cd3d9d15087285c3ef6599a 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 1.4E-38 T 14-09-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AY555_RS01380 09cc1bb73cd3d9d15087285c3ef6599a 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 1.4E-38 T 14-09-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AY555_RS01380 09cc1bb73cd3d9d15087285c3ef6599a 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 1.4E-38 T 14-09-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AY555_RS01380 09cc1bb73cd3d9d15087285c3ef6599a 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 1.4E-38 T 14-09-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AY555_RS01380 09cc1bb73cd3d9d15087285c3ef6599a 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 1.4E-38 T 14-09-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AY555_RS01380 09cc1bb73cd3d9d15087285c3ef6599a 298 PANTHER PTHR22855 1 281 2.5E-132 T 14-09-2016 AY555_RS01380 09cc1bb73cd3d9d15087285c3ef6599a 298 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 37.531 T 14-09-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AY555_RS01380 09cc1bb73cd3d9d15087285c3ef6599a 298 Pfam PF01039 Carboxyl transferase domain 98 240 1.3E-18 T 14-09-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AY555_RS01380 09cc1bb73cd3d9d15087285c3ef6599a 298 SUPERFAMILY SSF52096 25 280 2.2E-76 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AY555_RS01380 09cc1bb73cd3d9d15087285c3ef6599a 298 Gene3D G3DSA:3.90.226.10 20 280 3.7E-66 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AY555_RS01380 09cc1bb73cd3d9d15087285c3ef6599a 298 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 282 6.3E-109 T 14-09-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AY555_RS01380 09cc1bb73cd3d9d15087285c3ef6599a 298 PANTHER PTHR22855:SF17 1 281 2.5E-132 T 14-09-2016 AY555_RS08700 7062b19c33912623d016673b97bdd6f9 478 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 10 464 3.9E-147 T 14-09-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 AY555_RS08700 7062b19c33912623d016673b97bdd6f9 478 PANTHER PTHR22773:SF41 1 475 8.9E-169 T 14-09-2016 AY555_RS08700 7062b19c33912623d016673b97bdd6f9 478 PANTHER PTHR22773 1 475 8.9E-169 T 14-09-2016 AY555_RS08700 7062b19c33912623d016673b97bdd6f9 478 Pfam PF00361 Proton-conducting membrane transporter 123 413 2.0E-80 T 14-09-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 AY555_RS08700 7062b19c33912623d016673b97bdd6f9 478 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 5 465 18.16 T 14-09-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 AY555_RS08700 7062b19c33912623d016673b97bdd6f9 478 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 212 233 2.3E-5 T 14-09-2016 AY555_RS08700 7062b19c33912623d016673b97bdd6f9 478 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 304 316 2.3E-5 T 14-09-2016 AY555_RS08700 7062b19c33912623d016673b97bdd6f9 478 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 409 428 2.3E-5 T 14-09-2016 AY555_RS08700 7062b19c33912623d016673b97bdd6f9 478 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 71 96 2.3E-5 T 14-09-2016 AY555_RS06140 5edff848978678098b0ba93127b6f867 469 PANTHER PTHR23135:SF3 23 459 1.7E-130 T 14-09-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AY555_RS06140 5edff848978678098b0ba93127b6f867 469 PANTHER PTHR23135 23 459 1.7E-130 T 14-09-2016 AY555_RS06140 5edff848978678098b0ba93127b6f867 469 Pfam PF01225 Mur ligase family, catalytic domain 23 70 3.0E-9 T 14-09-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 AY555_RS06140 5edff848978678098b0ba93127b6f867 469 Gene3D G3DSA:3.90.190.20 330 460 1.5E-32 T 14-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AY555_RS06140 5edff848978678098b0ba93127b6f867 469 Gene3D G3DSA:3.40.1190.10 91 311 3.6E-65 T 14-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AY555_RS06140 5edff848978678098b0ba93127b6f867 469 Pfam PF02875 Mur ligase family, glutamate ligase domain 333 398 9.0E-8 T 14-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AY555_RS06140 5edff848978678098b0ba93127b6f867 469 Pfam PF08245 Mur ligase middle domain 106 295 5.7E-44 T 14-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AY555_RS06140 5edff848978678098b0ba93127b6f867 469 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 28 458 8.6E-115 T 14-09-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AY555_RS06140 5edff848978678098b0ba93127b6f867 469 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 1 459 31.57 T 14-09-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AY555_RS06140 5edff848978678098b0ba93127b6f867 469 SUPERFAMILY SSF63418 2 98 5.62E-20 T 14-09-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 AY555_RS06140 5edff848978678098b0ba93127b6f867 469 Gene3D G3DSA:3.40.1390.10 15 90 1.4E-19 T 14-09-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 AY555_RS06140 5edff848978678098b0ba93127b6f867 469 SUPERFAMILY SSF53623 102 312 1.24E-53 T 14-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AY555_RS06140 5edff848978678098b0ba93127b6f867 469 SUPERFAMILY SSF53244 331 458 1.14E-28 T 14-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AY555_RS06160 147ea426d1c4b8136bb2b053cd0e314a 318 Gene3D G3DSA:3.40.50.150 217 310 2.9E-44 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS06160 147ea426d1c4b8136bb2b053cd0e314a 318 Gene3D G3DSA:3.40.50.150 8 112 2.9E-44 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS06160 147ea426d1c4b8136bb2b053cd0e314a 318 SUPERFAMILY SSF81799 116 214 3.92E-34 T 14-09-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AY555_RS06160 147ea426d1c4b8136bb2b053cd0e314a 318 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 8 309 35.46 T 14-09-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AY555_RS06160 147ea426d1c4b8136bb2b053cd0e314a 318 Gene3D G3DSA:1.10.150.170 115 216 8.5E-36 T 14-09-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AY555_RS06160 147ea426d1c4b8136bb2b053cd0e314a 318 PANTHER PTHR11265:SF0 5 311 9.6E-132 T 14-09-2016 AY555_RS06160 147ea426d1c4b8136bb2b053cd0e314a 318 SUPERFAMILY SSF53335 214 308 6.26E-42 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS06160 147ea426d1c4b8136bb2b053cd0e314a 318 SUPERFAMILY SSF53335 8 115 6.26E-42 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS06160 147ea426d1c4b8136bb2b053cd0e314a 318 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 4 306 1.4E-90 T 14-09-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AY555_RS06160 147ea426d1c4b8136bb2b053cd0e314a 318 PIRSF PIRSF004486 2 310 1.4E-97 T 14-09-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AY555_RS06160 147ea426d1c4b8136bb2b053cd0e314a 318 Pfam PF01795 MraW methylase family 7 305 4.5E-94 T 14-09-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AY555_RS06160 147ea426d1c4b8136bb2b053cd0e314a 318 PANTHER PTHR11265 5 311 9.6E-132 T 14-09-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AY555_RS08370 85f2c962c6d9c4a217381d7f599c15dc 216 SUPERFAMILY SSF53335 1 174 8.83E-37 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS08370 85f2c962c6d9c4a217381d7f599c15dc 216 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 14 190 3.9E-41 T 14-09-2016 AY555_RS08370 85f2c962c6d9c4a217381d7f599c15dc 216 PANTHER PTHR11579:SF0 1 171 8.7E-33 T 14-09-2016 AY555_RS08370 85f2c962c6d9c4a217381d7f599c15dc 216 Gene3D G3DSA:3.40.50.150 10 213 1.5E-50 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS08370 85f2c962c6d9c4a217381d7f599c15dc 216 PANTHER PTHR11579 1 171 8.7E-33 T 14-09-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AY555_RS09885 2032b5421dc209cd993b3f4a49576952 205 SUPERFAMILY SSF55120 9 192 4.48E-37 T 14-09-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AY555_RS09885 2032b5421dc209cd993b3f4a49576952 205 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 45 59 - T 14-09-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AY555_RS09885 2032b5421dc209cd993b3f4a49576952 205 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 13 188 2.5E-43 T 14-09-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AY555_RS09885 2032b5421dc209cd993b3f4a49576952 205 PANTHER PTHR21600:SF23 133 193 7.4E-62 T 14-09-2016 AY555_RS09885 2032b5421dc209cd993b3f4a49576952 205 PANTHER PTHR21600 8 115 7.4E-62 T 14-09-2016 AY555_RS09885 2032b5421dc209cd993b3f4a49576952 205 PANTHER PTHR21600 133 193 7.4E-62 T 14-09-2016 AY555_RS09885 2032b5421dc209cd993b3f4a49576952 205 PANTHER PTHR21600:SF23 8 115 7.4E-62 T 14-09-2016 AY555_RS09885 2032b5421dc209cd993b3f4a49576952 205 Pfam PF00849 RNA pseudouridylate synthase 9 159 5.9E-14 T 14-09-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AY555_RS00340 56c48686aa1f69345feffd490a2b74bc 257 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 111 130 1.4E-6 T 14-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AY555_RS00340 56c48686aa1f69345feffd490a2b74bc 257 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 136 145 1.4E-6 T 14-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AY555_RS00340 56c48686aa1f69345feffd490a2b74bc 257 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 215 223 1.4E-6 T 14-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AY555_RS00340 56c48686aa1f69345feffd490a2b74bc 257 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 51 58 1.4E-6 T 14-09-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AY555_RS00340 56c48686aa1f69345feffd490a2b74bc 257 PANTHER PTHR19370:SF98 1 240 1.5E-111 T 14-09-2016 AY555_RS00340 56c48686aa1f69345feffd490a2b74bc 257 PANTHER PTHR19370 1 240 1.5E-111 T 14-09-2016 AY555_RS00340 56c48686aa1f69345feffd490a2b74bc 257 Pfam PF00970 Oxidoreductase FAD-binding domain 18 92 4.1E-8 T 14-09-2016 IPR008333 Oxidoreductase, FAD-binding domain AY555_RS00340 56c48686aa1f69345feffd490a2b74bc 257 Gene3D G3DSA:3.40.50.80 97 256 3.4E-45 T 14-09-2016 AY555_RS00340 56c48686aa1f69345feffd490a2b74bc 257 Pfam PF00175 Oxidoreductase NAD-binding domain 112 229 2.0E-8 T 14-09-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AY555_RS00340 56c48686aa1f69345feffd490a2b74bc 257 SUPERFAMILY SSF63380 4 99 4.48E-25 T 14-09-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AY555_RS00340 56c48686aa1f69345feffd490a2b74bc 257 SUPERFAMILY SSF52343 104 255 1.01E-39 T 14-09-2016 AY555_RS00340 56c48686aa1f69345feffd490a2b74bc 257 Gene3D G3DSA:2.40.30.10 4 96 8.9E-30 T 14-09-2016 AY555_RS08760 afc1447f969a5dd8e15e03491618b12e 189 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 42 183 8.8E-76 T 14-09-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 AY555_RS08760 afc1447f969a5dd8e15e03491618b12e 189 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 149 165 - T 14-09-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 AY555_RS08760 afc1447f969a5dd8e15e03491618b12e 189 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 69 177 5.4E-22 T 14-09-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 AY555_RS08760 afc1447f969a5dd8e15e03491618b12e 189 PANTHER PTHR11995:SF19 42 184 2.3E-122 T 14-09-2016 AY555_RS08760 afc1447f969a5dd8e15e03491618b12e 189 SUPERFAMILY SSF56770 40 183 1.83E-66 T 14-09-2016 AY555_RS08760 afc1447f969a5dd8e15e03491618b12e 189 PANTHER PTHR11995 42 184 2.3E-122 T 14-09-2016 AY555_RS08760 afc1447f969a5dd8e15e03491618b12e 189 Gene3D G3DSA:3.40.50.700 52 180 1.5E-33 T 14-09-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 AY555_RS08760 afc1447f969a5dd8e15e03491618b12e 189 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 31 182 41.429 T 14-09-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 AY555_RS06390 21cafd4da474e3026ab19faec657c2e4 157 Gene3D G3DSA:1.10.260.40 27 89 6.0E-16 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AY555_RS06390 21cafd4da474e3026ab19faec657c2e4 157 Pfam PF01381 Helix-turn-helix 35 88 2.6E-12 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AY555_RS06390 21cafd4da474e3026ab19faec657c2e4 157 SUPERFAMILY SSF47413 27 91 1.35E-14 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AY555_RS06390 21cafd4da474e3026ab19faec657c2e4 157 SMART SM00530 33 88 8.9E-14 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AY555_RS04770 ec28239fc016c71ab91d82656e8d76e5 291 Pfam PF00549 CoA-ligase 151 272 1.5E-23 T 14-09-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AY555_RS04770 ec28239fc016c71ab91d82656e8d76e5 291 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 14-09-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AY555_RS04770 ec28239fc016c71ab91d82656e8d76e5 291 Gene3D G3DSA:3.40.50.720 3 119 1.1E-54 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS04770 ec28239fc016c71ab91d82656e8d76e5 291 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 237 250 - T 14-09-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site AY555_RS04770 ec28239fc016c71ab91d82656e8d76e5 291 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.3E-41 T 14-09-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AY555_RS04770 ec28239fc016c71ab91d82656e8d76e5 291 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.3E-41 T 14-09-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AY555_RS04770 ec28239fc016c71ab91d82656e8d76e5 291 PRINTS PR01798 Succinyl-CoA synthase signature 241 258 1.3E-41 T 14-09-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AY555_RS04770 ec28239fc016c71ab91d82656e8d76e5 291 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.3E-41 T 14-09-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AY555_RS04770 ec28239fc016c71ab91d82656e8d76e5 291 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 288 2.0E-140 T 14-09-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AY555_RS04770 ec28239fc016c71ab91d82656e8d76e5 291 SUPERFAMILY SSF51735 1 122 3.64E-40 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS04770 ec28239fc016c71ab91d82656e8d76e5 291 Gene3D G3DSA:3.40.50.261 120 289 8.0E-76 T 14-09-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AY555_RS04770 ec28239fc016c71ab91d82656e8d76e5 291 PANTHER PTHR11117 1 290 4.2E-199 T 14-09-2016 AY555_RS04770 ec28239fc016c71ab91d82656e8d76e5 291 PIRSF PIRSF001553 1 291 2.3E-129 T 14-09-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AY555_RS04770 ec28239fc016c71ab91d82656e8d76e5 291 SMART SM00881 4 100 5.3E-31 T 14-09-2016 IPR003781 CoA-binding GO:0048037 AY555_RS04770 ec28239fc016c71ab91d82656e8d76e5 291 Pfam PF02629 CoA binding domain 7 99 6.1E-29 T 14-09-2016 IPR003781 CoA-binding GO:0048037 AY555_RS04770 ec28239fc016c71ab91d82656e8d76e5 291 SUPERFAMILY SSF52210 123 289 3.14E-55 T 14-09-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AY555_RS03895 b0e30aabc6614ca0bdc04cd7aceef444 1396 Pfam PF13087 AAA domain 1018 1209 1.1E-10 T 14-09-2016 AY555_RS03895 b0e30aabc6614ca0bdc04cd7aceef444 1396 Pfam PF13086 AAA domain 939 979 6.9E-7 T 14-09-2016 AY555_RS03895 b0e30aabc6614ca0bdc04cd7aceef444 1396 Pfam PF13195 Protein of unknown function (DUF4011) 19 190 2.9E-37 T 14-09-2016 IPR025103 Protein of unknown function DUF4011 AY555_RS03895 b0e30aabc6614ca0bdc04cd7aceef444 1396 PANTHER PTHR10887 1019 1213 1.5E-59 T 14-09-2016 AY555_RS03895 b0e30aabc6614ca0bdc04cd7aceef444 1396 PANTHER PTHR10887 854 987 1.5E-59 T 14-09-2016 AY555_RS03895 b0e30aabc6614ca0bdc04cd7aceef444 1396 Gene3D G3DSA:3.40.960.10 1313 1360 6.6E-4 T 14-09-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 AY555_RS03895 b0e30aabc6614ca0bdc04cd7aceef444 1396 SUPERFAMILY SSF52980 1251 1355 2.9E-14 T 14-09-2016 IPR011335 Restriction endonuclease type II-like AY555_RS03895 b0e30aabc6614ca0bdc04cd7aceef444 1396 Gene3D G3DSA:3.40.50.300 939 1048 1.5E-40 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS03895 b0e30aabc6614ca0bdc04cd7aceef444 1396 Gene3D G3DSA:3.40.50.300 294 409 1.5E-40 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS03895 b0e30aabc6614ca0bdc04cd7aceef444 1396 Pfam PF13245 Part of AAA domain 312 363 5.8E-9 T 14-09-2016 AY555_RS03895 b0e30aabc6614ca0bdc04cd7aceef444 1396 PANTHER PTHR10887:SF340 1019 1213 1.5E-59 T 14-09-2016 AY555_RS03895 b0e30aabc6614ca0bdc04cd7aceef444 1396 PANTHER PTHR10887:SF340 854 987 1.5E-59 T 14-09-2016 AY555_RS03895 b0e30aabc6614ca0bdc04cd7aceef444 1396 PANTHER PTHR10887:SF340 300 381 1.5E-59 T 14-09-2016 AY555_RS03895 b0e30aabc6614ca0bdc04cd7aceef444 1396 PANTHER PTHR10887 300 381 1.5E-59 T 14-09-2016 AY555_RS03895 b0e30aabc6614ca0bdc04cd7aceef444 1396 SUPERFAMILY SSF52540 1019 1236 1.65E-37 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS03895 b0e30aabc6614ca0bdc04cd7aceef444 1396 SUPERFAMILY SSF52540 300 367 1.65E-37 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS03895 b0e30aabc6614ca0bdc04cd7aceef444 1396 SUPERFAMILY SSF52540 922 990 1.65E-37 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS03895 b0e30aabc6614ca0bdc04cd7aceef444 1396 SUPERFAMILY SSF52540 412 434 1.65E-37 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS05865 9362b6d20f236b23dd7bc44b98c96ad5 315 PIRSF PIRSF000446 1 313 1.9E-92 T 14-09-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 AY555_RS05865 9362b6d20f236b23dd7bc44b98c96ad5 315 PANTHER PTHR10982 4 309 8.3E-140 T 14-09-2016 AY555_RS05865 9362b6d20f236b23dd7bc44b98c96ad5 315 SUPERFAMILY SSF55048 130 200 8.24E-15 T 14-09-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 AY555_RS05865 9362b6d20f236b23dd7bc44b98c96ad5 315 SUPERFAMILY SSF52151 193 311 1.28E-76 T 14-09-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AY555_RS05865 9362b6d20f236b23dd7bc44b98c96ad5 315 SUPERFAMILY SSF52151 3 124 1.28E-76 T 14-09-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AY555_RS05865 9362b6d20f236b23dd7bc44b98c96ad5 315 Gene3D G3DSA:3.40.366.10 200 307 2.2E-69 T 14-09-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 AY555_RS05865 9362b6d20f236b23dd7bc44b98c96ad5 315 Gene3D G3DSA:3.40.366.10 4 124 2.2E-69 T 14-09-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 AY555_RS05865 9362b6d20f236b23dd7bc44b98c96ad5 315 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 315 1.0E-42 T 14-09-2016 IPR020801 Polyketide synthase, acyl transferase domain AY555_RS05865 9362b6d20f236b23dd7bc44b98c96ad5 315 Pfam PF00698 Acyl transferase domain 5 277 1.9E-38 T 14-09-2016 IPR014043 Acyl transferase AY555_RS05865 9362b6d20f236b23dd7bc44b98c96ad5 315 Gene3D G3DSA:3.30.70.250 127 199 6.2E-24 T 14-09-2016 AY555_RS05865 9362b6d20f236b23dd7bc44b98c96ad5 315 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 4 294 1.2E-93 T 14-09-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AY555_RS03815 85f6cc8470b6807f1358615c30a96cda 199 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 3 173 7.8E-36 T 14-09-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 AY555_RS03815 85f6cc8470b6807f1358615c30a96cda 199 SUPERFAMILY SSF52540 2 190 8.2E-30 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS03815 85f6cc8470b6807f1358615c30a96cda 199 PANTHER PTHR10695 1 193 1.9E-50 T 14-09-2016 AY555_RS03815 85f6cc8470b6807f1358615c30a96cda 199 Pfam PF01121 Dephospho-CoA kinase 3 173 7.4E-41 T 14-09-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 AY555_RS03815 85f6cc8470b6807f1358615c30a96cda 199 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 196 25.132 T 14-09-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 AY555_RS03815 85f6cc8470b6807f1358615c30a96cda 199 Gene3D G3DSA:3.40.50.300 1 192 4.5E-58 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS06575 158e32723c819f831bc20af976a4e4fb 173 SUPERFAMILY SSF46955 12 62 2.2E-7 T 14-09-2016 IPR009061 Putative DNA-binding domain AY555_RS06575 158e32723c819f831bc20af976a4e4fb 173 Pfam PF07471 Phage DNA packaging protein Nu1 10 158 2.4E-21 T 14-09-2016 IPR010906 Bacteriophage lambda, Nu1, terminase small subunit AY555_RS06575 158e32723c819f831bc20af976a4e4fb 173 Gene3D G3DSA:1.10.10.10 10 61 1.9E-16 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS00635 814110f0c4e21d9bb07850a0b836b56f 268 PANTHER PTHR10804:SF82 6 268 7.9E-127 T 14-09-2016 AY555_RS00635 814110f0c4e21d9bb07850a0b836b56f 268 PANTHER PTHR10804 6 268 7.9E-127 T 14-09-2016 AY555_RS00635 814110f0c4e21d9bb07850a0b836b56f 268 SUPERFAMILY SSF55920 15 262 4.06E-84 T 14-09-2016 IPR000994 Peptidase M24, structural domain AY555_RS00635 814110f0c4e21d9bb07850a0b836b56f 268 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 13 256 1.3E-89 T 14-09-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 AY555_RS00635 814110f0c4e21d9bb07850a0b836b56f 268 Pfam PF00557 Metallopeptidase family M24 21 248 3.0E-53 T 14-09-2016 IPR000994 Peptidase M24, structural domain AY555_RS00635 814110f0c4e21d9bb07850a0b836b56f 268 Gene3D G3DSA:3.90.230.10 14 260 1.1E-89 T 14-09-2016 IPR000994 Peptidase M24, structural domain AY555_RS00635 814110f0c4e21d9bb07850a0b836b56f 268 Hamap MF_01974 Methionine aminopeptidase [map]. 11 258 38.885 T 14-09-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 AY555_RS00635 814110f0c4e21d9bb07850a0b836b56f 268 PRINTS PR00599 Methionine aminopeptidase-1 signature 169 181 1.4E-21 T 14-09-2016 IPR001714 Peptidase M24, methionine aminopeptidase AY555_RS00635 814110f0c4e21d9bb07850a0b836b56f 268 PRINTS PR00599 Methionine aminopeptidase-1 signature 99 115 1.4E-21 T 14-09-2016 IPR001714 Peptidase M24, methionine aminopeptidase AY555_RS00635 814110f0c4e21d9bb07850a0b836b56f 268 PRINTS PR00599 Methionine aminopeptidase-1 signature 200 212 1.4E-21 T 14-09-2016 IPR001714 Peptidase M24, methionine aminopeptidase AY555_RS00635 814110f0c4e21d9bb07850a0b836b56f 268 PRINTS PR00599 Methionine aminopeptidase-1 signature 76 89 1.4E-21 T 14-09-2016 IPR001714 Peptidase M24, methionine aminopeptidase AY555_RS00635 814110f0c4e21d9bb07850a0b836b56f 268 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 175 193 - T 14-09-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 AY555_RS04125 747344cff6823009d32ebbb8e1313ba5 205 Pfam PF01810 LysE type translocator 13 198 3.0E-23 T 14-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AY555_RS04125 747344cff6823009d32ebbb8e1313ba5 205 PANTHER PTHR30086:SF6 2 203 3.5E-39 T 14-09-2016 AY555_RS04125 747344cff6823009d32ebbb8e1313ba5 205 PANTHER PTHR30086 2 203 3.5E-39 T 14-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AY555_RS09540 51ce7118f7d497f6c4cf54d7a7de8054 108 PIRSF PIRSF031780 1 107 3.3E-28 T 14-09-2016 IPR009945 Protein of unknown function DUF1476 AY555_RS09540 51ce7118f7d497f6c4cf54d7a7de8054 108 Pfam PF07345 Domain of unknown function (DUF1476) 3 102 1.1E-31 T 14-09-2016 IPR009945 Protein of unknown function DUF1476 AY555_RS08790 b4577639c6dbe26e403bd607609fde0d 454 SMART SM00116 403 449 1.1 T 14-09-2016 IPR000644 CBS domain AY555_RS08790 b4577639c6dbe26e403bd607609fde0d 454 SMART SM00116 339 386 3.6E-9 T 14-09-2016 IPR000644 CBS domain AY555_RS08790 b4577639c6dbe26e403bd607609fde0d 454 Gene3D G3DSA:3.10.580.10 339 449 4.4E-24 T 14-09-2016 AY555_RS08790 b4577639c6dbe26e403bd607609fde0d 454 SUPERFAMILY SSF53686 4 317 2.88E-95 T 14-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AY555_RS08790 b4577639c6dbe26e403bd607609fde0d 454 Gene3D G3DSA:3.40.50.1100 39 143 3.5E-37 T 14-09-2016 AY555_RS08790 b4577639c6dbe26e403bd607609fde0d 454 SUPERFAMILY SSF54631 337 448 2.15E-23 T 14-09-2016 AY555_RS08790 b4577639c6dbe26e403bd607609fde0d 454 PANTHER PTHR10314:SF35 5 337 3.3E-127 T 14-09-2016 AY555_RS08790 b4577639c6dbe26e403bd607609fde0d 454 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 29 47 - T 14-09-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 AY555_RS08790 b4577639c6dbe26e403bd607609fde0d 454 Pfam PF00571 CBS domain 396 448 3.1E-9 T 14-09-2016 IPR000644 CBS domain AY555_RS08790 b4577639c6dbe26e403bd607609fde0d 454 Pfam PF00571 CBS domain 340 385 1.5E-8 T 14-09-2016 IPR000644 CBS domain AY555_RS08790 b4577639c6dbe26e403bd607609fde0d 454 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 7 298 2.0E-67 T 14-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AY555_RS08790 b4577639c6dbe26e403bd607609fde0d 454 Gene3D G3DSA:3.40.50.1100 149 317 2.8E-66 T 14-09-2016 AY555_RS08790 b4577639c6dbe26e403bd607609fde0d 454 Gene3D G3DSA:3.40.50.1100 2 38 2.8E-66 T 14-09-2016 AY555_RS08790 b4577639c6dbe26e403bd607609fde0d 454 PANTHER PTHR10314 5 337 3.3E-127 T 14-09-2016 AY555_RS07725 cd595c98b77efb2b12b5fe21a0abf8bf 398 SUPERFAMILY SSF103473 8 392 5.36E-42 T 14-09-2016 IPR020846 Major facilitator superfamily domain AY555_RS07725 cd595c98b77efb2b12b5fe21a0abf8bf 398 PANTHER PTHR23522:SF3 1 398 1.1E-89 T 14-09-2016 AY555_RS07725 cd595c98b77efb2b12b5fe21a0abf8bf 398 Pfam PF12832 MFS_1 like family 10 360 1.5E-46 T 14-09-2016 IPR024989 Major facilitator superfamily associated domain AY555_RS07725 cd595c98b77efb2b12b5fe21a0abf8bf 398 Gene3D G3DSA:1.20.1250.20 6 191 2.9E-17 T 14-09-2016 AY555_RS07725 cd595c98b77efb2b12b5fe21a0abf8bf 398 Gene3D G3DSA:1.20.1250.20 197 395 1.3E-25 T 14-09-2016 AY555_RS07725 cd595c98b77efb2b12b5fe21a0abf8bf 398 PANTHER PTHR23522 1 398 1.1E-89 T 14-09-2016 AY555_RS07725 cd595c98b77efb2b12b5fe21a0abf8bf 398 PIRSF PIRSF004925 2 391 1.6E-108 T 14-09-2016 IPR026032 Probable 3-phenylpropionic acid transporter AY555_RS07370 9429085d3348d502ece3a82ca1fd0679 737 PANTHER PTHR23408:SF1 41 708 0.0 T 14-09-2016 AY555_RS07370 9429085d3348d502ece3a82ca1fd0679 737 PANTHER PTHR23408 41 708 0.0 T 14-09-2016 AY555_RS07370 9429085d3348d502ece3a82ca1fd0679 737 Gene3D G3DSA:3.40.50.280 569 729 1.3E-66 T 14-09-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 AY555_RS07370 9429085d3348d502ece3a82ca1fd0679 737 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 47 567 2.9E-260 T 14-09-2016 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0008152|GO:0031419 AY555_RS07370 9429085d3348d502ece3a82ca1fd0679 737 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 601 729 2.6E-60 T 14-09-2016 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 AY555_RS07370 9429085d3348d502ece3a82ca1fd0679 737 Gene3D G3DSA:3.20.20.240 47 563 5.8E-241 T 14-09-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 AY555_RS07370 9429085d3348d502ece3a82ca1fd0679 737 Pfam PF02310 B12 binding domain 604 716 1.1E-12 T 14-09-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 AY555_RS07370 9429085d3348d502ece3a82ca1fd0679 737 Pfam PF01642 Methylmalonyl-CoA mutase 48 561 1.1E-224 T 14-09-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 AY555_RS07370 9429085d3348d502ece3a82ca1fd0679 737 ProSitePatterns PS00544 Methylmalonyl-CoA mutase signature. 390 415 - T 14-09-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 AY555_RS07370 9429085d3348d502ece3a82ca1fd0679 737 SUPERFAMILY SSF52242 575 730 9.03E-55 T 14-09-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 AY555_RS07370 9429085d3348d502ece3a82ca1fd0679 737 SUPERFAMILY SSF51703 39 563 3.92E-213 T 14-09-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 AY555_RS00890 8b7c49c26729c63ba6c285298a881337 178 Gene3D G3DSA:3.90.930.12 84 178 1.1E-38 T 14-09-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 AY555_RS00890 8b7c49c26729c63ba6c285298a881337 178 PRINTS PR00059 Ribosomal protein L6 signature 142 163 7.3E-31 T 14-09-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AY555_RS00890 8b7c49c26729c63ba6c285298a881337 178 PRINTS PR00059 Ribosomal protein L6 signature 100 116 7.3E-31 T 14-09-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AY555_RS00890 8b7c49c26729c63ba6c285298a881337 178 PRINTS PR00059 Ribosomal protein L6 signature 72 97 7.3E-31 T 14-09-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AY555_RS00890 8b7c49c26729c63ba6c285298a881337 178 SUPERFAMILY SSF56053 1 83 3.6E-23 T 14-09-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 AY555_RS00890 8b7c49c26729c63ba6c285298a881337 178 PANTHER PTHR11655 1 177 1.4E-77 T 14-09-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 AY555_RS00890 8b7c49c26729c63ba6c285298a881337 178 Gene3D G3DSA:3.90.930.12 2 83 1.7E-26 T 14-09-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 AY555_RS00890 8b7c49c26729c63ba6c285298a881337 178 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 177 36.269 T 14-09-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AY555_RS00890 8b7c49c26729c63ba6c285298a881337 178 Pfam PF00347 Ribosomal protein L6 91 165 1.8E-19 T 14-09-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 AY555_RS00890 8b7c49c26729c63ba6c285298a881337 178 Pfam PF00347 Ribosomal protein L6 11 83 3.7E-15 T 14-09-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 AY555_RS00890 8b7c49c26729c63ba6c285298a881337 178 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 155 163 - T 14-09-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00890 8b7c49c26729c63ba6c285298a881337 178 SUPERFAMILY SSF56053 84 178 1.44E-36 T 14-09-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 AY555_RS00890 8b7c49c26729c63ba6c285298a881337 178 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 177 2.9E-70 T 14-09-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AY555_RS00890 8b7c49c26729c63ba6c285298a881337 178 PIRSF PIRSF002162 1 178 7.8E-51 T 14-09-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 AY555_RS00890 8b7c49c26729c63ba6c285298a881337 178 PANTHER PTHR11655:SF14 1 177 1.4E-77 T 14-09-2016 AY555_RS01420 a794a957ab12ad43aa7b58f89fb09634 611 Gene3D G3DSA:3.30.450.20 226 350 8.9E-21 T 14-09-2016 AY555_RS01420 a794a957ab12ad43aa7b58f89fb09634 611 SMART SM00086 310 352 0.0027 T 14-09-2016 IPR001610 PAC motif AY555_RS01420 a794a957ab12ad43aa7b58f89fb09634 611 Gene3D G3DSA:3.30.565.10 431 593 6.7E-34 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS01420 a794a957ab12ad43aa7b58f89fb09634 611 SUPERFAMILY SSF55785 226 350 3.84E-22 T 14-09-2016 IPR000014 PAS domain AY555_RS01420 a794a957ab12ad43aa7b58f89fb09634 611 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 233 359 1.3E-18 T 14-09-2016 IPR000014 PAS domain AY555_RS01420 a794a957ab12ad43aa7b58f89fb09634 611 SUPERFAMILY SSF47384 358 436 9.81E-6 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS01420 a794a957ab12ad43aa7b58f89fb09634 611 PANTHER PTHR24423 234 597 9.5E-60 T 14-09-2016 AY555_RS01420 a794a957ab12ad43aa7b58f89fb09634 611 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 593 6.4E-22 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS01420 a794a957ab12ad43aa7b58f89fb09634 611 SUPERFAMILY SSF55874 435 596 2.62E-34 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS01420 a794a957ab12ad43aa7b58f89fb09634 611 SMART SM00387 482 594 5.0E-26 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS01420 a794a957ab12ad43aa7b58f89fb09634 611 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 535 2.2E-13 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS01420 a794a957ab12ad43aa7b58f89fb09634 611 PRINTS PR00344 Bacterial sensor protein C-terminal signature 554 572 2.2E-13 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS01420 a794a957ab12ad43aa7b58f89fb09634 611 PRINTS PR00344 Bacterial sensor protein C-terminal signature 578 591 2.2E-13 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS01420 a794a957ab12ad43aa7b58f89fb09634 611 Pfam PF13426 PAS domain 247 351 9.1E-12 T 14-09-2016 IPR000014 PAS domain AY555_RS01420 a794a957ab12ad43aa7b58f89fb09634 611 SMART SM00091 236 303 3.3E-4 T 14-09-2016 IPR000014 PAS domain AY555_RS00600 705c4d4c1fb9931a8d17fc432f5cc6e2 349 SMART SM00849 40 258 1.7E-18 T 14-09-2016 IPR001279 Metallo-beta-lactamase AY555_RS00600 705c4d4c1fb9931a8d17fc432f5cc6e2 349 PANTHER PTHR11935:SF109 7 140 1.1E-45 T 14-09-2016 AY555_RS00600 705c4d4c1fb9931a8d17fc432f5cc6e2 349 SUPERFAMILY SSF56281 5 336 2.49E-63 T 14-09-2016 IPR001279 Metallo-beta-lactamase AY555_RS00600 705c4d4c1fb9931a8d17fc432f5cc6e2 349 PANTHER PTHR11935 7 140 1.1E-45 T 14-09-2016 AY555_RS00600 705c4d4c1fb9931a8d17fc432f5cc6e2 349 PANTHER PTHR11935 158 271 1.1E-45 T 14-09-2016 AY555_RS00600 705c4d4c1fb9931a8d17fc432f5cc6e2 349 Pfam PF00753 Metallo-beta-lactamase superfamily 39 258 8.9E-20 T 14-09-2016 IPR001279 Metallo-beta-lactamase AY555_RS00600 705c4d4c1fb9931a8d17fc432f5cc6e2 349 PANTHER PTHR11935:SF109 158 271 1.1E-45 T 14-09-2016 AY555_RS00600 705c4d4c1fb9931a8d17fc432f5cc6e2 349 Gene3D G3DSA:3.60.15.10 13 288 4.2E-49 T 14-09-2016 IPR001279 Metallo-beta-lactamase AY555_RS00265 e03d17c4665721b4de2e77aa1f2d3ca3 560 Gene3D G3DSA:1.25.40.10 34 248 1.1E-7 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS00265 e03d17c4665721b4de2e77aa1f2d3ca3 560 Pfam PF07721 Tetratricopeptide repeat 136 156 0.064 T 14-09-2016 IPR011717 Tetratricopeptide TPR-4 GO:0042802 UniPathway: UPA00694 AY555_RS00265 e03d17c4665721b4de2e77aa1f2d3ca3 560 PANTHER PTHR23083 94 233 4.4E-47 T 14-09-2016 AY555_RS00265 e03d17c4665721b4de2e77aa1f2d3ca3 560 PANTHER PTHR23083 16 78 4.4E-47 T 14-09-2016 AY555_RS00265 e03d17c4665721b4de2e77aa1f2d3ca3 560 PANTHER PTHR23083 257 541 4.4E-47 T 14-09-2016 AY555_RS00265 e03d17c4665721b4de2e77aa1f2d3ca3 560 Gene3D G3DSA:1.25.40.10 260 540 2.7E-53 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS00265 e03d17c4665721b4de2e77aa1f2d3ca3 560 SUPERFAMILY SSF48452 30 228 8.22E-9 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS00265 e03d17c4665721b4de2e77aa1f2d3ca3 560 Pfam PF13432 Tetratricopeptide repeat 333 388 3.7E-6 T 14-09-2016 AY555_RS00265 e03d17c4665721b4de2e77aa1f2d3ca3 560 Pfam PF07719 Tetratricopeptide repeat 402 434 2.8E-6 T 14-09-2016 IPR013105 Tetratricopeptide repeat 2 AY555_RS00265 e03d17c4665721b4de2e77aa1f2d3ca3 560 SMART SM00028 470 503 0.033 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AY555_RS00265 e03d17c4665721b4de2e77aa1f2d3ca3 560 SMART SM00028 401 434 1.4E-5 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AY555_RS00265 e03d17c4665721b4de2e77aa1f2d3ca3 560 SMART SM00028 30 63 260.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AY555_RS00265 e03d17c4665721b4de2e77aa1f2d3ca3 560 SMART SM00028 329 362 220.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AY555_RS00265 e03d17c4665721b4de2e77aa1f2d3ca3 560 SMART SM00028 504 537 1.6 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AY555_RS00265 e03d17c4665721b4de2e77aa1f2d3ca3 560 SMART SM00028 363 396 39.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AY555_RS00265 e03d17c4665721b4de2e77aa1f2d3ca3 560 SUPERFAMILY SSF48452 262 538 1.99E-32 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS00265 e03d17c4665721b4de2e77aa1f2d3ca3 560 Pfam PF13414 TPR repeat 479 518 1.2E-8 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS07035 31b85f835b89d0dabb1d8206e64f8950 472 PANTHER PTHR21337 3 462 1.9E-287 T 14-09-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 AY555_RS07035 31b85f835b89d0dabb1d8206e64f8950 472 SUPERFAMILY SSF51569 19 457 1.54E-195 T 14-09-2016 AY555_RS07035 31b85f835b89d0dabb1d8206e64f8950 472 Pfam PF01474 Class-II DAHP synthetase family 25 453 2.7E-198 T 14-09-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 AY555_RS07035 31b85f835b89d0dabb1d8206e64f8950 472 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 26 459 2.7E-210 T 14-09-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 AY555_RS02385 d01828dd2b484669838543c952b68ec6 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 14-09-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AY555_RS02385 d01828dd2b484669838543c952b68ec6 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.3E-49 T 14-09-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AY555_RS02385 d01828dd2b484669838543c952b68ec6 118 Gene3D G3DSA:1.10.1900.20 55 117 1.7E-30 T 14-09-2016 AY555_RS02385 d01828dd2b484669838543c952b68ec6 118 PANTHER PTHR10986 2 117 5.0E-63 T 14-09-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AY555_RS02385 d01828dd2b484669838543c952b68ec6 118 Pfam PF00453 Ribosomal protein L20 3 109 3.0E-50 T 14-09-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AY555_RS02385 d01828dd2b484669838543c952b68ec6 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.687 T 14-09-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AY555_RS02385 d01828dd2b484669838543c952b68ec6 118 PANTHER PTHR10986:SF12 2 117 5.0E-63 T 14-09-2016 AY555_RS02385 d01828dd2b484669838543c952b68ec6 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 71 7.0E-20 T 14-09-2016 AY555_RS02385 d01828dd2b484669838543c952b68ec6 118 SUPERFAMILY SSF74731 3 117 2.75E-50 T 14-09-2016 AY555_RS02385 d01828dd2b484669838543c952b68ec6 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 7.7E-39 T 14-09-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AY555_RS02385 d01828dd2b484669838543c952b68ec6 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 7.7E-39 T 14-09-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AY555_RS02385 d01828dd2b484669838543c952b68ec6 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 7.7E-39 T 14-09-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AY555_RS08065 e8bef403096c9ee67d7a7a31540f9f38 461 Hamap MF_00303 Trigger factor [tig]. 1 425 20.771 T 14-09-2016 IPR005215 Trigger factor GO:0015031 AY555_RS08065 e8bef403096c9ee67d7a7a31540f9f38 461 PANTHER PTHR30560 1 437 1.4E-101 T 14-09-2016 AY555_RS08065 e8bef403096c9ee67d7a7a31540f9f38 461 SUPERFAMILY SSF102735 1 131 5.89E-35 T 14-09-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AY555_RS08065 e8bef403096c9ee67d7a7a31540f9f38 461 SUPERFAMILY SSF109998 250 436 2.35E-43 T 14-09-2016 IPR027304 Trigger factor/SurA domain AY555_RS08065 e8bef403096c9ee67d7a7a31540f9f38 461 PIRSF PIRSF003095 1 441 4.3E-126 T 14-09-2016 IPR005215 Trigger factor GO:0015031 AY555_RS08065 e8bef403096c9ee67d7a7a31540f9f38 461 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 4.8E-36 T 14-09-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AY555_RS08065 e8bef403096c9ee67d7a7a31540f9f38 461 TIGRFAM TIGR00115 tig: trigger factor 12 419 1.5E-127 T 14-09-2016 IPR005215 Trigger factor GO:0015031 AY555_RS08065 e8bef403096c9ee67d7a7a31540f9f38 461 Gene3D G3DSA:3.10.50.40 152 217 7.6E-8 T 14-09-2016 AY555_RS08065 e8bef403096c9ee67d7a7a31540f9f38 461 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 419 1.0E-38 T 14-09-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 AY555_RS08065 e8bef403096c9ee67d7a7a31540f9f38 461 Gene3D G3DSA:3.30.70.1050 1 115 1.0E-34 T 14-09-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AY555_RS08065 e8bef403096c9ee67d7a7a31540f9f38 461 Gene3D G3DSA:1.10.3120.10 218 394 1.7E-51 T 14-09-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 AY555_RS08065 e8bef403096c9ee67d7a7a31540f9f38 461 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 158 239 1.1E-14 T 14-09-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 AY555_RS08065 e8bef403096c9ee67d7a7a31540f9f38 461 SUPERFAMILY SSF54534 88 243 7.66E-31 T 14-09-2016 AY555_RS08445 712e3191e3b6dfe7347d07e27b1a4e0c 442 Gene3D G3DSA:1.10.101.10 373 431 1.4E-13 T 14-09-2016 IPR002477 Peptidoglycan binding-like AY555_RS08445 712e3191e3b6dfe7347d07e27b1a4e0c 442 SUPERFAMILY SSF47090 366 430 2.16E-14 T 14-09-2016 IPR002477 Peptidoglycan binding-like AY555_RS08445 712e3191e3b6dfe7347d07e27b1a4e0c 442 Pfam PF01471 Putative peptidoglycan binding domain 374 429 1.4E-11 T 14-09-2016 IPR002477 Peptidoglycan binding-like AY555_RS08445 712e3191e3b6dfe7347d07e27b1a4e0c 442 Pfam PF13406 Transglycosylase SLT domain 62 354 8.1E-106 T 14-09-2016 IPR031304 Transglycosylase SLT domain 2 AY555_RS08445 712e3191e3b6dfe7347d07e27b1a4e0c 442 PANTHER PTHR30163:SF2 48 433 7.9E-151 T 14-09-2016 AY555_RS08445 712e3191e3b6dfe7347d07e27b1a4e0c 442 PANTHER PTHR30163 48 433 7.9E-151 T 14-09-2016 IPR011757 Lytic transglycosylase MltB AY555_RS08445 712e3191e3b6dfe7347d07e27b1a4e0c 442 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 61 357 9.1E-110 T 14-09-2016 IPR011970 Lytic murein transglycosylase AY555_RS08445 712e3191e3b6dfe7347d07e27b1a4e0c 442 Gene3D G3DSA:1.10.530.10 242 357 1.5E-57 T 14-09-2016 AY555_RS08445 712e3191e3b6dfe7347d07e27b1a4e0c 442 Gene3D G3DSA:1.10.530.10 104 161 1.5E-57 T 14-09-2016 AY555_RS08445 712e3191e3b6dfe7347d07e27b1a4e0c 442 SUPERFAMILY SSF53955 58 360 6.08E-96 T 14-09-2016 IPR023346 Lysozyme-like domain AY555_RS09655 445b55bdf774b23a4ce126a3009e3d21 179 Gene3D G3DSA:1.10.287.180 15 88 1.5E-20 T 14-09-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AY555_RS09655 445b55bdf774b23a4ce126a3009e3d21 179 Pfam PF03449 Transcription elongation factor, N-terminal 18 87 8.7E-21 T 14-09-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AY555_RS09655 445b55bdf774b23a4ce126a3009e3d21 179 Hamap MF_00930 Transcription elongation factor GreB [greB]. 14 170 46.064 T 14-09-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 AY555_RS09655 445b55bdf774b23a4ce126a3009e3d21 179 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 97 169 1.2E-24 T 14-09-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AY555_RS09655 445b55bdf774b23a4ce126a3009e3d21 179 Gene3D G3DSA:3.10.50.30 92 169 4.9E-27 T 14-09-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AY555_RS09655 445b55bdf774b23a4ce126a3009e3d21 179 SUPERFAMILY SSF54534 94 169 7.46E-20 T 14-09-2016 AY555_RS09655 445b55bdf774b23a4ce126a3009e3d21 179 PANTHER PTHR30437 17 177 3.5E-60 T 14-09-2016 AY555_RS09655 445b55bdf774b23a4ce126a3009e3d21 179 PIRSF PIRSF006092 13 171 7.4E-44 T 14-09-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AY555_RS09655 445b55bdf774b23a4ce126a3009e3d21 179 Hamap MF_00105 Transcription elongation factor GreA [greA]. 15 168 26.224 T 14-09-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AY555_RS09655 445b55bdf774b23a4ce126a3009e3d21 179 SUPERFAMILY SSF46557 16 91 6.15E-24 T 14-09-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AY555_RS09655 445b55bdf774b23a4ce126a3009e3d21 179 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 16 170 1.2E-56 T 14-09-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 AY555_RS09655 445b55bdf774b23a4ce126a3009e3d21 179 PANTHER PTHR30437:SF6 17 177 3.5E-60 T 14-09-2016 AY555_RS03850 0cd6a48b2ef8a51c301758e67b4efb91 418 PANTHER PTHR15184:SF34 78 418 6.3E-185 T 14-09-2016 AY555_RS03850 0cd6a48b2ef8a51c301758e67b4efb91 418 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 418 241.775 T 14-09-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AY555_RS03850 0cd6a48b2ef8a51c301758e67b4efb91 418 Gene3D G3DSA:3.40.50.300 130 417 1.8E-105 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS03850 0cd6a48b2ef8a51c301758e67b4efb91 418 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 5.1E-21 T 14-09-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AY555_RS03850 0cd6a48b2ef8a51c301758e67b4efb91 418 PANTHER PTHR15184 78 418 6.3E-185 T 14-09-2016 AY555_RS03850 0cd6a48b2ef8a51c301758e67b4efb91 418 SMART SM00382 170 364 3.0E-7 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS03850 0cd6a48b2ef8a51c301758e67b4efb91 418 SMART SM00959 5 47 4.7E-15 T 14-09-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 AY555_RS03850 0cd6a48b2ef8a51c301758e67b4efb91 418 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 7.5E-32 T 14-09-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 AY555_RS03850 0cd6a48b2ef8a51c301758e67b4efb91 418 SUPERFAMILY SSF68912 1 45 7.85E-11 T 14-09-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 AY555_RS03850 0cd6a48b2ef8a51c301758e67b4efb91 418 Pfam PF07498 Rho termination factor, N-terminal domain 5 46 9.7E-15 T 14-09-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 AY555_RS03850 0cd6a48b2ef8a51c301758e67b4efb91 418 SUPERFAMILY SSF50249 49 125 8.57E-29 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS03850 0cd6a48b2ef8a51c301758e67b4efb91 418 Gene3D G3DSA:1.10.720.10 1 45 3.2E-19 T 14-09-2016 AY555_RS03850 0cd6a48b2ef8a51c301758e67b4efb91 418 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 4.1E-210 T 14-09-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AY555_RS03850 0cd6a48b2ef8a51c301758e67b4efb91 418 SMART SM00357 52 118 1.2E-15 T 14-09-2016 IPR011129 Cold shock protein GO:0003676 AY555_RS03850 0cd6a48b2ef8a51c301758e67b4efb91 418 SUPERFAMILY SSF52540 90 371 2.13E-65 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS03850 0cd6a48b2ef8a51c301758e67b4efb91 418 Gene3D G3DSA:2.40.50.140 49 117 1.6E-34 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS07435 8e00b782af7d572b7bda5a6b725aa244 337 PANTHER PTHR22594 25 331 2.8E-103 T 14-09-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS07435 8e00b782af7d572b7bda5a6b725aa244 337 SUPERFAMILY SSF55681 18 333 5.18E-71 T 14-09-2016 AY555_RS07435 8e00b782af7d572b7bda5a6b725aa244 337 Gene3D G3DSA:3.30.930.10 24 333 2.3E-66 T 14-09-2016 AY555_RS07435 8e00b782af7d572b7bda5a6b725aa244 337 Pfam PF00152 tRNA synthetases class II (D, K and N) 223 332 2.1E-14 T 14-09-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS07435 8e00b782af7d572b7bda5a6b725aa244 337 Pfam PF00152 tRNA synthetases class II (D, K and N) 24 146 5.9E-23 T 14-09-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS07435 8e00b782af7d572b7bda5a6b725aa244 337 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 25 333 5.6E-115 T 14-09-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 AY555_RS07435 8e00b782af7d572b7bda5a6b725aa244 337 PRINTS PR00982 Lysyl-tRNA synthetase signature 40 50 1.1E-13 T 14-09-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 AY555_RS07435 8e00b782af7d572b7bda5a6b725aa244 337 PRINTS PR00982 Lysyl-tRNA synthetase signature 223 239 1.1E-13 T 14-09-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 AY555_RS07435 8e00b782af7d572b7bda5a6b725aa244 337 PRINTS PR00982 Lysyl-tRNA synthetase signature 107 124 1.1E-13 T 14-09-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 AY555_RS07435 8e00b782af7d572b7bda5a6b725aa244 337 PRINTS PR00982 Lysyl-tRNA synthetase signature 89 102 1.1E-13 T 14-09-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 AY555_RS07435 8e00b782af7d572b7bda5a6b725aa244 337 PANTHER PTHR22594:SF7 25 331 2.8E-103 T 14-09-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 AY555_RS04760 4bb8a84684f5068e46df0f0fe7d48d9f 319 PANTHER PTHR11540:SF16 1 316 2.1E-149 T 14-09-2016 AY555_RS04760 4bb8a84684f5068e46df0f0fe7d48d9f 319 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 311 6.8E-31 T 14-09-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 AY555_RS04760 4bb8a84684f5068e46df0f0fe7d48d9f 319 PANTHER PTHR11540 1 316 2.1E-149 T 14-09-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AY555_RS04760 4bb8a84684f5068e46df0f0fe7d48d9f 319 Gene3D G3DSA:3.90.110.10 145 313 2.6E-62 T 14-09-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AY555_RS04760 4bb8a84684f5068e46df0f0fe7d48d9f 319 SUPERFAMILY SSF56327 144 310 2.74E-57 T 14-09-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AY555_RS04760 4bb8a84684f5068e46df0f0fe7d48d9f 319 SUPERFAMILY SSF51735 5 144 9.76E-45 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS04760 4bb8a84684f5068e46df0f0fe7d48d9f 319 Gene3D G3DSA:3.40.50.720 2 144 1.5E-46 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS04760 4bb8a84684f5068e46df0f0fe7d48d9f 319 TIGRFAM TIGR01763 MalateDH_bact: malate dehydrogenase, NAD-dependent 3 307 5.3E-128 T 14-09-2016 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 AY555_RS04760 4bb8a84684f5068e46df0f0fe7d48d9f 319 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 143 1.8E-38 T 14-09-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 AY555_RS04760 4bb8a84684f5068e46df0f0fe7d48d9f 319 PIRSF PIRSF000102 1 316 1.4E-104 T 14-09-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AY555_RS04760 4bb8a84684f5068e46df0f0fe7d48d9f 319 Hamap MF_00487 Malate dehydrogenase [mdh]. 4 313 41.698 T 14-09-2016 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 AY555_RS04760 4bb8a84684f5068e46df0f0fe7d48d9f 319 PRINTS PR00086 L-lactate dehydrogenase signature 141 159 4.4E-28 T 14-09-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AY555_RS04760 4bb8a84684f5068e46df0f0fe7d48d9f 319 PRINTS PR00086 L-lactate dehydrogenase signature 5 29 4.4E-28 T 14-09-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AY555_RS04760 4bb8a84684f5068e46df0f0fe7d48d9f 319 PRINTS PR00086 L-lactate dehydrogenase signature 117 137 4.4E-28 T 14-09-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AY555_RS04760 4bb8a84684f5068e46df0f0fe7d48d9f 319 PRINTS PR00086 L-lactate dehydrogenase signature 29 53 4.4E-28 T 14-09-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AY555_RS04760 4bb8a84684f5068e46df0f0fe7d48d9f 319 PRINTS PR00086 L-lactate dehydrogenase signature 171 184 4.4E-28 T 14-09-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AY555_RS04110 1afac950d866341b1d95f207bc2be849 240 Pfam PF04972 BON domain 69 134 2.7E-7 T 14-09-2016 IPR007055 BON domain AY555_RS04110 1afac950d866341b1d95f207bc2be849 240 Pfam PF04972 BON domain 155 217 8.6E-9 T 14-09-2016 IPR007055 BON domain AY555_RS04110 1afac950d866341b1d95f207bc2be849 240 PANTHER PTHR34606 62 221 3.0E-13 T 14-09-2016 AY555_RS06790 4a77f8340707a9259983445a535350ec 201 PANTHER PTHR33508 1 199 7.3E-61 T 14-09-2016 AY555_RS06790 4a77f8340707a9259983445a535350ec 201 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 4 189 1.3E-30 T 14-09-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AY555_RS06790 4a77f8340707a9259983445a535350ec 201 Pfam PF01914 MarC family integral membrane protein 3 191 1.1E-47 T 14-09-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AY555_RS06790 4a77f8340707a9259983445a535350ec 201 PANTHER PTHR33508:SF4 1 199 7.3E-61 T 14-09-2016 AY555_RS04975 d7baccd754199b9ef14442bed0f9343b 1906 SMART SM00388 1643 1727 1.2E-4 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS04975 d7baccd754199b9ef14442bed0f9343b 1906 Pfam PF13191 AAA ATPase domain 289 476 5.8E-23 T 14-09-2016 AY555_RS04975 d7baccd754199b9ef14442bed0f9343b 1906 SUPERFAMILY SSF55785 1480 1540 6.11E-7 T 14-09-2016 IPR000014 PAS domain AY555_RS04975 d7baccd754199b9ef14442bed0f9343b 1906 Pfam PF01590 GAF domain 1310 1458 8.8E-9 T 14-09-2016 IPR003018 GAF domain GO:0005515 AY555_RS04975 d7baccd754199b9ef14442bed0f9343b 1906 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1866 1879 2.0E-11 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS04975 d7baccd754199b9ef14442bed0f9343b 1906 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1810 1824 2.0E-11 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS04975 d7baccd754199b9ef14442bed0f9343b 1906 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1828 1838 2.0E-11 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS04975 d7baccd754199b9ef14442bed0f9343b 1906 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1841 1859 2.0E-11 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS04975 d7baccd754199b9ef14442bed0f9343b 1906 SUPERFAMILY SSF56112 3 241 3.46E-31 T 14-09-2016 IPR011009 Protein kinase-like domain AY555_RS04975 d7baccd754199b9ef14442bed0f9343b 1906 Gene3D G3DSA:3.30.450.20 1484 1605 7.2E-10 T 14-09-2016 AY555_RS04975 d7baccd754199b9ef14442bed0f9343b 1906 Gene3D G3DSA:3.30.450.40 1297 1465 1.0E-22 T 14-09-2016 IPR029016 GAF domain-like AY555_RS04975 d7baccd754199b9ef14442bed0f9343b 1906 PANTHER PTHR16305 273 1354 2.6E-82 T 14-09-2016 AY555_RS04975 d7baccd754199b9ef14442bed0f9343b 1906 SUPERFAMILY SSF52540 287 559 5.43E-14 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04975 d7baccd754199b9ef14442bed0f9343b 1906 SMART SM00065 1307 1468 2.2E-7 T 14-09-2016 IPR003018 GAF domain GO:0005515 AY555_RS04975 d7baccd754199b9ef14442bed0f9343b 1906 Gene3D G3DSA:3.30.565.10 1729 1883 4.1E-32 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS04975 d7baccd754199b9ef14442bed0f9343b 1906 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1773 1881 7.9E-18 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS04975 d7baccd754199b9ef14442bed0f9343b 1906 SMART SM00220 7 251 1.1E-9 T 14-09-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AY555_RS04975 d7baccd754199b9ef14442bed0f9343b 1906 SUPERFAMILY SSF47384 1638 1719 1.39E-5 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS04975 d7baccd754199b9ef14442bed0f9343b 1906 Pfam PF12860 PAS fold 1496 1611 3.5E-16 T 14-09-2016 AY555_RS04975 d7baccd754199b9ef14442bed0f9343b 1906 Gene3D G3DSA:3.40.50.300 285 453 1.8E-5 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04975 d7baccd754199b9ef14442bed0f9343b 1906 SUPERFAMILY SSF55781 1311 1470 1.11E-19 T 14-09-2016 IPR029016 GAF domain-like AY555_RS04975 d7baccd754199b9ef14442bed0f9343b 1906 Gene3D G3DSA:3.30.200.20 3 76 1.8E-7 T 14-09-2016 AY555_RS04975 d7baccd754199b9ef14442bed0f9343b 1906 SMART SM00387 1769 1882 3.4E-18 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS04975 d7baccd754199b9ef14442bed0f9343b 1906 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1643 1744 1.3E-7 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS04975 d7baccd754199b9ef14442bed0f9343b 1906 Gene3D G3DSA:1.10.510.10 77 242 3.6E-18 T 14-09-2016 AY555_RS04975 d7baccd754199b9ef14442bed0f9343b 1906 SUPERFAMILY SSF55874 1718 1883 1.7E-32 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS04975 d7baccd754199b9ef14442bed0f9343b 1906 Pfam PF00069 Protein kinase domain 14 209 6.1E-13 T 14-09-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AY555_RS04975 d7baccd754199b9ef14442bed0f9343b 1906 Gene3D G3DSA:1.10.287.130 1638 1718 1.9E-4 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS08875 1890f7d5870e6cfbd4bf1bf44673ea58 542 Gene3D G3DSA:3.40.50.880 290 538 4.1E-95 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AY555_RS08875 1890f7d5870e6cfbd4bf1bf44673ea58 542 PANTHER PTHR11550 1 536 0.0 T 14-09-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 AY555_RS08875 1890f7d5870e6cfbd4bf1bf44673ea58 542 Hamap MF_01227 CTP synthase [pyrG]. 2 539 49.761 T 14-09-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 AY555_RS08875 1890f7d5870e6cfbd4bf1bf44673ea58 542 Pfam PF06418 CTP synthase N-terminus 3 265 2.2E-119 T 14-09-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 AY555_RS08875 1890f7d5870e6cfbd4bf1bf44673ea58 542 TIGRFAM TIGR00337 PyrG: CTP synthase 2 534 1.8E-228 T 14-09-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 AY555_RS08875 1890f7d5870e6cfbd4bf1bf44673ea58 542 Pfam PF00117 Glutamine amidotransferase class-I 301 534 3.4E-58 T 14-09-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 AY555_RS08875 1890f7d5870e6cfbd4bf1bf44673ea58 542 SUPERFAMILY SSF52317 290 536 5.69E-80 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AY555_RS08875 1890f7d5870e6cfbd4bf1bf44673ea58 542 SUPERFAMILY SSF52540 1 266 8.58E-118 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08875 1890f7d5870e6cfbd4bf1bf44673ea58 542 Gene3D G3DSA:3.40.50.300 1 283 5.7E-124 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04020 f7b42da9489068f135289594e14c2ef2 142 Gene3D G3DSA:3.30.300.20 9 122 3.8E-28 T 14-09-2016 IPR015946 K homology domain-like, alpha/beta AY555_RS04020 f7b42da9489068f135289594e14c2ef2 142 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 15 105 6.0E-17 T 14-09-2016 IPR000238 Ribosome-binding factor A GO:0006364 AY555_RS04020 f7b42da9489068f135289594e14c2ef2 142 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 8 125 18.058 T 14-09-2016 IPR000238 Ribosome-binding factor A GO:0006364 AY555_RS04020 f7b42da9489068f135289594e14c2ef2 142 Pfam PF02033 Ribosome-binding factor A 12 118 1.1E-24 T 14-09-2016 IPR000238 Ribosome-binding factor A GO:0006364 AY555_RS04020 f7b42da9489068f135289594e14c2ef2 142 PANTHER PTHR33515 4 142 1.8E-27 T 14-09-2016 AY555_RS04020 f7b42da9489068f135289594e14c2ef2 142 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 11 119 6.8E-15 T 14-09-2016 IPR000238 Ribosome-binding factor A GO:0006364 AY555_RS04020 f7b42da9489068f135289594e14c2ef2 142 SUPERFAMILY SSF89919 8 121 1.57E-28 T 14-09-2016 IPR023799 Ribosome-binding factor A domain AY555_RS04020 f7b42da9489068f135289594e14c2ef2 142 ProSitePatterns PS01319 Ribosome-binding factor A signature. 84 105 - T 14-09-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 AY555_RS02325 22ae4b255589fa22b8c94a83e0db2750 595 PANTHER PTHR10283 12 212 4.3E-119 T 14-09-2016 AY555_RS02325 22ae4b255589fa22b8c94a83e0db2750 595 PANTHER PTHR10283 292 312 4.3E-119 T 14-09-2016 AY555_RS02325 22ae4b255589fa22b8c94a83e0db2750 595 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 543 559 - T 14-09-2016 IPR031312 Sodium/sulphate symporter, conserved site AY555_RS02325 22ae4b255589fa22b8c94a83e0db2750 595 Gene3D G3DSA:3.30.70.1450 313 392 1.9E-18 T 14-09-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AY555_RS02325 22ae4b255589fa22b8c94a83e0db2750 595 Gene3D G3DSA:3.30.70.1450 225 299 8.7E-11 T 14-09-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AY555_RS02325 22ae4b255589fa22b8c94a83e0db2750 595 Pfam PF02080 TrkA-C domain 226 291 3.8E-7 T 14-09-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AY555_RS02325 22ae4b255589fa22b8c94a83e0db2750 595 Pfam PF02080 TrkA-C domain 320 383 9.5E-11 T 14-09-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AY555_RS02325 22ae4b255589fa22b8c94a83e0db2750 595 Pfam PF03600 Citrate transporter 21 540 2.9E-53 T 14-09-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 AY555_RS02325 22ae4b255589fa22b8c94a83e0db2750 595 PANTHER PTHR10283:SF100 12 212 4.3E-119 T 14-09-2016 AY555_RS02325 22ae4b255589fa22b8c94a83e0db2750 595 PANTHER PTHR10283:SF100 356 595 4.3E-119 T 14-09-2016 AY555_RS02325 22ae4b255589fa22b8c94a83e0db2750 595 PANTHER PTHR10283:SF100 292 312 4.3E-119 T 14-09-2016 AY555_RS02325 22ae4b255589fa22b8c94a83e0db2750 595 PANTHER PTHR10283 356 595 4.3E-119 T 14-09-2016 AY555_RS02325 22ae4b255589fa22b8c94a83e0db2750 595 SUPERFAMILY SSF116726 222 293 3.01E-10 T 14-09-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AY555_RS02325 22ae4b255589fa22b8c94a83e0db2750 595 SUPERFAMILY SSF116726 312 388 2.22E-15 T 14-09-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AY555_RS03725 7129511e1f5f6427107275c4f514cd8c 171 Gene3D G3DSA:3.10.420.10 19 165 1.9E-51 T 14-09-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AY555_RS03725 7129511e1f5f6427107275c4f514cd8c 171 PANTHER PTHR36918 7 171 2.4E-44 T 14-09-2016 AY555_RS03725 7129511e1f5f6427107275c4f514cd8c 171 PANTHER PTHR36918:SF1 7 171 2.4E-44 T 14-09-2016 AY555_RS03725 7129511e1f5f6427107275c4f514cd8c 171 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 26 43 1.6E-21 T 14-09-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AY555_RS03725 7129511e1f5f6427107275c4f514cd8c 171 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 138 156 1.6E-21 T 14-09-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AY555_RS03725 7129511e1f5f6427107275c4f514cd8c 171 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 112 134 1.6E-21 T 14-09-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AY555_RS03725 7129511e1f5f6427107275c4f514cd8c 171 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 88 108 1.6E-21 T 14-09-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AY555_RS03725 7129511e1f5f6427107275c4f514cd8c 171 SUPERFAMILY SSF54611 16 156 3.92E-43 T 14-09-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AY555_RS03725 7129511e1f5f6427107275c4f514cd8c 171 Pfam PF02556 Preprotein translocase subunit SecB 23 158 1.4E-49 T 14-09-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AY555_RS03725 7129511e1f5f6427107275c4f514cd8c 171 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 23 155 2.8E-36 T 14-09-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AY555_RS03725 7129511e1f5f6427107275c4f514cd8c 171 Hamap MF_00821 Protein-export protein SecB [secB]. 1 160 28.019 T 14-09-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AY555_RS07440 2b42a6086a27f1937b5c8e072d38a2f7 212 Pfam PF02581 Thiamine monophosphate synthase/TENI 10 192 2.1E-55 T 14-09-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 AY555_RS07440 2b42a6086a27f1937b5c8e072d38a2f7 212 PANTHER PTHR20857 1 210 4.2E-46 T 14-09-2016 AY555_RS07440 2b42a6086a27f1937b5c8e072d38a2f7 212 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 9 198 8.2E-54 T 14-09-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 AY555_RS07440 2b42a6086a27f1937b5c8e072d38a2f7 212 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 7 211 22.515 T 14-09-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 AY555_RS07440 2b42a6086a27f1937b5c8e072d38a2f7 212 PANTHER PTHR20857:SF15 1 210 4.2E-46 T 14-09-2016 AY555_RS07440 2b42a6086a27f1937b5c8e072d38a2f7 212 Gene3D G3DSA:3.20.20.70 6 210 7.7E-59 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS07440 2b42a6086a27f1937b5c8e072d38a2f7 212 SUPERFAMILY SSF51391 5 209 7.85E-61 T 14-09-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 AY555_RS01495 f59c75dd7d7665fe4515085bce2e8e09 172 PRINTS PR00598 Bacterial regulatory protein MarR family signature 98 114 8.3E-7 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AY555_RS01495 f59c75dd7d7665fe4515085bce2e8e09 172 PRINTS PR00598 Bacterial regulatory protein MarR family signature 62 78 8.3E-7 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AY555_RS01495 f59c75dd7d7665fe4515085bce2e8e09 172 PRINTS PR00598 Bacterial regulatory protein MarR family signature 79 94 8.3E-7 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AY555_RS01495 f59c75dd7d7665fe4515085bce2e8e09 172 ProSitePatterns PS01117 MarR-type HTH domain signature. 77 111 - T 14-09-2016 IPR023187 Transcriptional regulator MarR-type, conserved site AY555_RS01495 f59c75dd7d7665fe4515085bce2e8e09 172 SMART SM00347 38 138 2.2E-16 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AY555_RS01495 f59c75dd7d7665fe4515085bce2e8e09 172 SUPERFAMILY SSF46785 22 150 4.74E-27 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS01495 f59c75dd7d7665fe4515085bce2e8e09 172 PANTHER PTHR33164 14 162 4.9E-14 T 14-09-2016 AY555_RS01495 f59c75dd7d7665fe4515085bce2e8e09 172 Gene3D G3DSA:1.10.10.10 22 148 6.0E-29 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS01495 f59c75dd7d7665fe4515085bce2e8e09 172 Pfam PF12802 MarR family 43 102 5.6E-13 T 14-09-2016 AY555_RS06145 3d6fb534512060274e684d3e36690195 470 Gene3D G3DSA:3.40.1390.10 3 76 2.5E-19 T 14-09-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 AY555_RS06145 3d6fb534512060274e684d3e36690195 470 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 3 460 1.1E-134 T 14-09-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 AY555_RS06145 3d6fb534512060274e684d3e36690195 470 PANTHER PTHR23135 1 470 7.9E-153 T 14-09-2016 AY555_RS06145 3d6fb534512060274e684d3e36690195 470 SUPERFAMILY SSF53623 78 300 7.06E-64 T 14-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AY555_RS06145 3d6fb534512060274e684d3e36690195 470 PANTHER PTHR23135:SF4 1 470 7.9E-153 T 14-09-2016 AY555_RS06145 3d6fb534512060274e684d3e36690195 470 Pfam PF08245 Mur ligase middle domain 85 287 6.2E-46 T 14-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AY555_RS06145 3d6fb534512060274e684d3e36690195 470 SUPERFAMILY SSF53244 310 463 7.72E-46 T 14-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AY555_RS06145 3d6fb534512060274e684d3e36690195 470 Pfam PF02875 Mur ligase family, glutamate ligase domain 310 394 2.9E-23 T 14-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AY555_RS06145 3d6fb534512060274e684d3e36690195 470 Pfam PF01225 Mur ligase family, catalytic domain 3 75 1.2E-9 T 14-09-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 AY555_RS06145 3d6fb534512060274e684d3e36690195 470 Gene3D G3DSA:3.40.1190.10 78 313 1.5E-65 T 14-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AY555_RS06145 3d6fb534512060274e684d3e36690195 470 SUPERFAMILY SSF63418 3 75 9.16E-18 T 14-09-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 AY555_RS06145 3d6fb534512060274e684d3e36690195 470 Gene3D G3DSA:3.90.190.20 314 453 1.4E-50 T 14-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AY555_RS06145 3d6fb534512060274e684d3e36690195 470 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 460 29.547 T 14-09-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 AY555_RS08665 163c825917b1e8fc0481a1a44d2e0dd4 696 Pfam PF00270 DEAD/DEAH box helicase 271 429 7.0E-17 T 14-09-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AY555_RS08665 163c825917b1e8fc0481a1a44d2e0dd4 696 SMART SM00487 265 455 9.8E-29 T 14-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AY555_RS08665 163c825917b1e8fc0481a1a44d2e0dd4 696 SUPERFAMILY SSF52540 447 648 2.59E-37 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08665 163c825917b1e8fc0481a1a44d2e0dd4 696 SUPERFAMILY SSF50249 7 179 1.1E-21 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS08665 163c825917b1e8fc0481a1a44d2e0dd4 696 Gene3D G3DSA:2.40.50.140 80 140 1.1E-8 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS08665 163c825917b1e8fc0481a1a44d2e0dd4 696 PANTHER PTHR24031 299 597 1.6E-114 T 14-09-2016 AY555_RS08665 163c825917b1e8fc0481a1a44d2e0dd4 696 PANTHER PTHR24031:SF249 620 694 1.6E-114 T 14-09-2016 AY555_RS08665 163c825917b1e8fc0481a1a44d2e0dd4 696 SUPERFAMILY SSF52540 183 448 7.79E-57 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08665 163c825917b1e8fc0481a1a44d2e0dd4 696 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 37 659 3.0E-205 T 14-09-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 AY555_RS08665 163c825917b1e8fc0481a1a44d2e0dd4 696 PANTHER PTHR24031:SF249 257 282 1.6E-114 T 14-09-2016 AY555_RS08665 163c825917b1e8fc0481a1a44d2e0dd4 696 PANTHER PTHR24031:SF249 299 597 1.6E-114 T 14-09-2016 AY555_RS08665 163c825917b1e8fc0481a1a44d2e0dd4 696 Pfam PF00271 Helicase conserved C-terminal domain 476 582 1.1E-17 T 14-09-2016 IPR001650 Helicase, C-terminal AY555_RS08665 163c825917b1e8fc0481a1a44d2e0dd4 696 SMART SM00490 500 583 5.1E-20 T 14-09-2016 IPR001650 Helicase, C-terminal AY555_RS08665 163c825917b1e8fc0481a1a44d2e0dd4 696 Gene3D G3DSA:3.40.50.300 256 449 6.9E-55 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08665 163c825917b1e8fc0481a1a44d2e0dd4 696 PANTHER PTHR24031 620 694 1.6E-114 T 14-09-2016 AY555_RS08665 163c825917b1e8fc0481a1a44d2e0dd4 696 PANTHER PTHR24031 257 282 1.6E-114 T 14-09-2016 AY555_RS08665 163c825917b1e8fc0481a1a44d2e0dd4 696 Gene3D G3DSA:3.40.50.300 450 631 8.9E-40 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS03005 9311426758c46d51aa762f48429277b1 1616 PANTHER PTHR11606:SF1 222 574 0.0 T 14-09-2016 AY555_RS03005 9311426758c46d51aa762f48429277b1 1616 SUPERFAMILY SSF53223 763 949 1.53E-24 T 14-09-2016 AY555_RS03005 9311426758c46d51aa762f48429277b1 1616 PANTHER PTHR11606 684 1106 0.0 T 14-09-2016 AY555_RS03005 9311426758c46d51aa762f48429277b1 1616 PANTHER PTHR11606 222 574 0.0 T 14-09-2016 AY555_RS03005 9311426758c46d51aa762f48429277b1 1616 PIRSF PIRSF036761 17 1616 0.0 T 14-09-2016 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 AY555_RS03005 9311426758c46d51aa762f48429277b1 1616 PANTHER PTHR11606:SF1 684 1106 0.0 T 14-09-2016 AY555_RS03005 9311426758c46d51aa762f48429277b1 1616 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 77 1610 0.0 T 14-09-2016 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 AY555_RS03005 9311426758c46d51aa762f48429277b1 1616 PANTHER PTHR11606:SF1 14 151 0.0 T 14-09-2016 AY555_RS03005 9311426758c46d51aa762f48429277b1 1616 PANTHER PTHR11606:SF1 1131 1376 0.0 T 14-09-2016 AY555_RS03005 9311426758c46d51aa762f48429277b1 1616 PANTHER PTHR11606 14 151 0.0 T 14-09-2016 AY555_RS03005 9311426758c46d51aa762f48429277b1 1616 PANTHER PTHR11606 1131 1376 0.0 T 14-09-2016 AY555_RS03005 9311426758c46d51aa762f48429277b1 1616 Gene3D G3DSA:3.40.50.720 1105 1204 8.1E-40 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS03005 9311426758c46d51aa762f48429277b1 1616 Gene3D G3DSA:3.40.50.720 951 1062 8.1E-40 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS03005 9311426758c46d51aa762f48429277b1 1616 SUPERFAMILY SSF51735 1092 1289 3.15E-30 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS03005 9311426758c46d51aa762f48429277b1 1616 SUPERFAMILY SSF51735 957 1056 3.15E-30 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS07205 27fc45313df8cccac313e459501fb5c6 473 Gene3D G3DSA:3.10.129.10 9 141 9.4E-36 T 14-09-2016 IPR029069 HotDog domain AY555_RS07205 27fc45313df8cccac313e459501fb5c6 473 PANTHER PTHR13078 4 140 1.2E-23 T 14-09-2016 AY555_RS07205 27fc45313df8cccac313e459501fb5c6 473 Pfam PF01575 MaoC like domain 21 117 1.8E-13 T 14-09-2016 IPR002539 MaoC-like domain AY555_RS07205 27fc45313df8cccac313e459501fb5c6 473 SUPERFAMILY SSF53659 167 458 2.75E-68 T 14-09-2016 AY555_RS07205 27fc45313df8cccac313e459501fb5c6 473 Pfam PF01515 Phosphate acetyl/butaryl transferase 241 454 4.2E-41 T 14-09-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 AY555_RS07205 27fc45313df8cccac313e459501fb5c6 473 Gene3D G3DSA:3.40.50.10750 274 431 1.9E-49 T 14-09-2016 AY555_RS07205 27fc45313df8cccac313e459501fb5c6 473 SUPERFAMILY SSF54637 5 143 2.17E-31 T 14-09-2016 IPR029069 HotDog domain AY555_RS08210 891a8f926337ef7f6181f18fe91d45df 190 PANTHER PTHR12184:SF2 1 134 9.2E-30 T 14-09-2016 AY555_RS08210 891a8f926337ef7f6181f18fe91d45df 190 PIRSF PIRSF032079 1 182 9.2E-48 T 14-09-2016 IPR014569 Ubiquinol-cytochrome c chaperone, CBP3-related AY555_RS08210 891a8f926337ef7f6181f18fe91d45df 190 Pfam PF03981 Ubiquinol-cytochrome C chaperone 35 167 5.4E-33 T 14-09-2016 IPR021150 Ubiquinol-cytochrome c chaperone/UPF0174 AY555_RS08210 891a8f926337ef7f6181f18fe91d45df 190 PANTHER PTHR12184 1 134 9.2E-30 T 14-09-2016 IPR007129 Ubiquinol-cytochrome c chaperone, CBP3 AY555_RS03225 9d98496f51ffaafb4ac3c192a4745300 346 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 2 320 35.066 T 14-09-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AY555_RS03225 9d98496f51ffaafb4ac3c192a4745300 346 SUPERFAMILY SSF48179 178 329 9.01E-50 T 14-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AY555_RS03225 9d98496f51ffaafb4ac3c192a4745300 346 PIRSF PIRSF000114 1 330 1.8E-94 T 14-09-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AY555_RS03225 9d98496f51ffaafb4ac3c192a4745300 346 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 4 157 9.0E-43 T 14-09-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AY555_RS03225 9d98496f51ffaafb4ac3c192a4745300 346 Gene3D G3DSA:3.40.50.720 1 181 1.0E-54 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS03225 9d98496f51ffaafb4ac3c192a4745300 346 PANTHER PTHR11728 4 333 8.1E-110 T 14-09-2016 AY555_RS03225 9d98496f51ffaafb4ac3c192a4745300 346 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 178 318 7.7E-47 T 14-09-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AY555_RS03225 9d98496f51ffaafb4ac3c192a4745300 346 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 186 207 - T 14-09-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AY555_RS03225 9d98496f51ffaafb4ac3c192a4745300 346 Gene3D G3DSA:1.10.1040.10 182 324 2.4E-50 T 14-09-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AY555_RS03225 9d98496f51ffaafb4ac3c192a4745300 346 SUPERFAMILY SSF51735 2 178 2.53E-45 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS03225 9d98496f51ffaafb4ac3c192a4745300 346 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 6 23 1.4E-35 T 14-09-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AY555_RS03225 9d98496f51ffaafb4ac3c192a4745300 346 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 131 151 1.4E-35 T 14-09-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AY555_RS03225 9d98496f51ffaafb4ac3c192a4745300 346 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 171 195 1.4E-35 T 14-09-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AY555_RS03225 9d98496f51ffaafb4ac3c192a4745300 346 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 236 253 1.4E-35 T 14-09-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AY555_RS03225 9d98496f51ffaafb4ac3c192a4745300 346 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 56 83 1.4E-35 T 14-09-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AY555_RS03225 9d98496f51ffaafb4ac3c192a4745300 346 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 196 220 1.4E-35 T 14-09-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AY555_RS07430 433f933d84368690776401800c6882a5 188 SMART SM01185 68 122 4.6E-18 T 14-09-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 AY555_RS07430 433f933d84368690776401800c6882a5 188 SUPERFAMILY SSF50249 66 127 2.48E-14 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS07430 433f933d84368690776401800c6882a5 188 Gene3D G3DSA:2.40.50.140 130 185 4.0E-21 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS07430 433f933d84368690776401800c6882a5 188 TIGRFAM TIGR00038 efp: translation elongation factor P 3 185 1.8E-66 T 14-09-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 AY555_RS07430 433f933d84368690776401800c6882a5 188 PIRSF PIRSF005901 1 187 2.2E-62 T 14-09-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 AY555_RS07430 433f933d84368690776401800c6882a5 188 SMART SM00841 130 185 4.7E-28 T 14-09-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 AY555_RS07430 433f933d84368690776401800c6882a5 188 Pfam PF09285 Elongation factor P, C-terminal 130 185 1.1E-20 T 14-09-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 AY555_RS07430 433f933d84368690776401800c6882a5 188 PANTHER PTHR30053:SF1 1 187 1.8E-76 T 14-09-2016 AY555_RS07430 433f933d84368690776401800c6882a5 188 Hamap MF_00141 Elongation factor P [efp]. 2 186 39.802 T 14-09-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 AY555_RS07430 433f933d84368690776401800c6882a5 188 Gene3D G3DSA:2.40.50.140 65 128 6.3E-20 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS07430 433f933d84368690776401800c6882a5 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 122 3.4E-17 T 14-09-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 AY555_RS07430 433f933d84368690776401800c6882a5 188 SUPERFAMILY SSF50249 130 185 1.16E-15 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS07430 433f933d84368690776401800c6882a5 188 PANTHER PTHR30053 1 187 1.8E-76 T 14-09-2016 AY555_RS07430 433f933d84368690776401800c6882a5 188 SUPERFAMILY SSF50104 3 63 2.17E-14 T 14-09-2016 IPR008991 Translation protein SH3-like domain AY555_RS07430 433f933d84368690776401800c6882a5 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 61 8.8E-19 T 14-09-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 AY555_RS07430 433f933d84368690776401800c6882a5 188 Gene3D G3DSA:2.30.30.30 3 63 1.1E-21 T 14-09-2016 IPR014722 Ribosomal protein L2 domain 2 AY555_RS01905 97f07d86a4e724b774198904ce1e29d3 391 PIRSF PIRSF000429 1 391 5.9E-130 T 14-09-2016 IPR002155 Thiolase GO:0008152|GO:0016747 AY555_RS01905 97f07d86a4e724b774198904ce1e29d3 391 Pfam PF00108 Thiolase, N-terminal domain 4 260 1.3E-105 T 14-09-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AY555_RS01905 97f07d86a4e724b774198904ce1e29d3 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 389 2.0E-147 T 14-09-2016 IPR002155 Thiolase GO:0008152|GO:0016747 AY555_RS01905 97f07d86a4e724b774198904ce1e29d3 391 SUPERFAMILY SSF53901 3 268 1.39E-86 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AY555_RS01905 97f07d86a4e724b774198904ce1e29d3 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 14-09-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 AY555_RS01905 97f07d86a4e724b774198904ce1e29d3 391 Gene3D G3DSA:3.40.47.10 193 274 1.3E-78 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AY555_RS01905 97f07d86a4e724b774198904ce1e29d3 391 Gene3D G3DSA:3.40.47.10 3 123 1.3E-78 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AY555_RS01905 97f07d86a4e724b774198904ce1e29d3 391 PANTHER PTHR18919 1 391 9.9E-226 T 14-09-2016 AY555_RS01905 97f07d86a4e724b774198904ce1e29d3 391 SUPERFAMILY SSF53901 269 389 2.04E-46 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AY555_RS01905 97f07d86a4e724b774198904ce1e29d3 391 PANTHER PTHR18919:SF95 1 391 9.9E-226 T 14-09-2016 AY555_RS01905 97f07d86a4e724b774198904ce1e29d3 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 14-09-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AY555_RS01905 97f07d86a4e724b774198904ce1e29d3 391 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 14-09-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AY555_RS01905 97f07d86a4e724b774198904ce1e29d3 391 Gene3D G3DSA:3.40.47.10 141 192 2.1E-70 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AY555_RS01905 97f07d86a4e724b774198904ce1e29d3 391 Gene3D G3DSA:3.40.47.10 275 390 2.1E-70 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AY555_RS01905 97f07d86a4e724b774198904ce1e29d3 391 Pfam PF02803 Thiolase, C-terminal domain 268 390 1.1E-52 T 14-09-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AY555_RS01810 f0f0c880438d3e6ca8af3657d13ec006 315 Gene3D G3DSA:3.40.50.720 198 255 3.9E-4 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS01810 f0f0c880438d3e6ca8af3657d13ec006 315 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 8 287 1.2E-96 T 14-09-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 AY555_RS01810 f0f0c880438d3e6ca8af3657d13ec006 315 PANTHER PTHR30426 8 314 1.3E-137 T 14-09-2016 AY555_RS01810 f0f0c880438d3e6ca8af3657d13ec006 315 Pfam PF02401 LytB protein 8 285 1.4E-88 T 14-09-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 AY555_RS01810 f0f0c880438d3e6ca8af3657d13ec006 315 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 6 290 36.037 T 14-09-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 AY555_RS01810 f0f0c880438d3e6ca8af3657d13ec006 315 SUPERFAMILY SSF51366 145 256 8.95E-6 T 14-09-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AY555_RS00040 4a36805298e2d1400d668a12f6bce71c 792 PRINTS PR00344 Bacterial sensor protein C-terminal signature 560 574 9.5E-19 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS00040 4a36805298e2d1400d668a12f6bce71c 792 PRINTS PR00344 Bacterial sensor protein C-terminal signature 617 630 9.5E-19 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS00040 4a36805298e2d1400d668a12f6bce71c 792 PRINTS PR00344 Bacterial sensor protein C-terminal signature 578 588 9.5E-19 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS00040 4a36805298e2d1400d668a12f6bce71c 792 PRINTS PR00344 Bacterial sensor protein C-terminal signature 593 611 9.5E-19 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS00040 4a36805298e2d1400d668a12f6bce71c 792 Pfam PF00512 His Kinase A (phospho-acceptor) domain 402 465 4.8E-9 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS00040 4a36805298e2d1400d668a12f6bce71c 792 Gene3D G3DSA:3.30.450.20 41 149 7.2E-7 T 14-09-2016 AY555_RS00040 4a36805298e2d1400d668a12f6bce71c 792 Pfam PF13426 PAS domain 53 151 0.98 T 14-09-2016 IPR000014 PAS domain AY555_RS00040 4a36805298e2d1400d668a12f6bce71c 792 SMART SM00091 164 230 0.0014 T 14-09-2016 IPR000014 PAS domain AY555_RS00040 4a36805298e2d1400d668a12f6bce71c 792 SMART SM00091 276 342 1.7E-9 T 14-09-2016 IPR000014 PAS domain AY555_RS00040 4a36805298e2d1400d668a12f6bce71c 792 SMART SM00091 39 105 260.0 T 14-09-2016 IPR000014 PAS domain AY555_RS00040 4a36805298e2d1400d668a12f6bce71c 792 Gene3D G3DSA:3.30.565.10 454 634 6.1E-38 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS00040 4a36805298e2d1400d668a12f6bce71c 792 Pfam PF13188 PAS domain 278 322 6.7E-8 T 14-09-2016 IPR000014 PAS domain AY555_RS00040 4a36805298e2d1400d668a12f6bce71c 792 SMART SM00387 508 633 4.6E-30 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS00040 4a36805298e2d1400d668a12f6bce71c 792 PANTHER PTHR24423:SF379 42 167 2.4E-144 T 14-09-2016 AY555_RS00040 4a36805298e2d1400d668a12f6bce71c 792 PANTHER PTHR24423:SF379 274 785 2.4E-144 T 14-09-2016 AY555_RS00040 4a36805298e2d1400d668a12f6bce71c 792 SMART SM00448 666 778 1.3E-24 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS00040 4a36805298e2d1400d668a12f6bce71c 792 SUPERFAMILY SSF55785 148 254 2.27E-11 T 14-09-2016 IPR000014 PAS domain AY555_RS00040 4a36805298e2d1400d668a12f6bce71c 792 Gene3D G3DSA:3.40.50.2300 665 786 6.8E-34 T 14-09-2016 AY555_RS00040 4a36805298e2d1400d668a12f6bce71c 792 Pfam PF08448 PAS fold 173 229 3.5E-5 T 14-09-2016 IPR013656 PAS fold-4 AY555_RS00040 4a36805298e2d1400d668a12f6bce71c 792 SUPERFAMILY SSF52172 665 785 1.34E-30 T 14-09-2016 IPR011006 CheY-like superfamily AY555_RS00040 4a36805298e2d1400d668a12f6bce71c 792 PANTHER PTHR24423 42 167 2.4E-144 T 14-09-2016 AY555_RS00040 4a36805298e2d1400d668a12f6bce71c 792 PANTHER PTHR24423 274 785 2.4E-144 T 14-09-2016 AY555_RS00040 4a36805298e2d1400d668a12f6bce71c 792 Gene3D G3DSA:3.30.450.20 276 357 6.1E-12 T 14-09-2016 AY555_RS00040 4a36805298e2d1400d668a12f6bce71c 792 SUPERFAMILY SSF55874 457 631 7.33E-37 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS00040 4a36805298e2d1400d668a12f6bce71c 792 Pfam PF00072 Response regulator receiver domain 668 778 1.4E-21 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS00040 4a36805298e2d1400d668a12f6bce71c 792 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 509 630 9.7E-19 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS00040 4a36805298e2d1400d668a12f6bce71c 792 Gene3D G3DSA:3.30.450.20 150 245 2.6E-9 T 14-09-2016 AY555_RS00040 4a36805298e2d1400d668a12f6bce71c 792 Gene3D G3DSA:1.10.287.130 396 453 5.6E-7 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS00040 4a36805298e2d1400d668a12f6bce71c 792 SUPERFAMILY SSF47384 394 464 9.42E-12 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS00040 4a36805298e2d1400d668a12f6bce71c 792 SMART SM00388 401 467 3.2E-10 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS00040 4a36805298e2d1400d668a12f6bce71c 792 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 276 354 1.6E-10 T 14-09-2016 IPR000014 PAS domain AY555_RS00040 4a36805298e2d1400d668a12f6bce71c 792 SUPERFAMILY SSF55785 275 355 2.09E-12 T 14-09-2016 IPR000014 PAS domain AY555_RS05005 9a0086317bd0c877dcbc0aa897991476 326 Pfam PF00669 Bacterial flagellin N-terminal helical region 24 157 1.0E-11 T 14-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AY555_RS05005 9a0086317bd0c877dcbc0aa897991476 326 Gene3D G3DSA:1.20.1330.10 228 278 7.9E-7 T 14-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AY555_RS05005 9a0086317bd0c877dcbc0aa897991476 326 Gene3D G3DSA:1.20.1330.10 78 188 7.9E-7 T 14-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AY555_RS05005 9a0086317bd0c877dcbc0aa897991476 326 Pfam PF00700 Bacterial flagellin C-terminal helical region 243 325 3.1E-7 T 14-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AY555_RS05005 9a0086317bd0c877dcbc0aa897991476 326 SUPERFAMILY SSF64518 21 326 7.19E-40 T 14-09-2016 AY555_RS03710 148df1b2d62794d64ac6320f5b8cb958 383 Pfam PF03562 MltA specific insert domain 52 283 2.3E-60 T 14-09-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 AY555_RS03710 148df1b2d62794d64ac6320f5b8cb958 383 PANTHER PTHR30124:SF0 107 382 2.8E-84 T 14-09-2016 AY555_RS03710 148df1b2d62794d64ac6320f5b8cb958 383 Pfam PF06725 3D domain 302 374 2.0E-21 T 14-09-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 AY555_RS03710 148df1b2d62794d64ac6320f5b8cb958 383 PANTHER PTHR30124 107 382 2.8E-84 T 14-09-2016 AY555_RS03710 148df1b2d62794d64ac6320f5b8cb958 383 PIRSF PIRSF019422 1 383 2.3E-112 T 14-09-2016 IPR026044 Membrane-bound lytic murein transglycosylase A AY555_RS03710 148df1b2d62794d64ac6320f5b8cb958 383 SMART SM00925 145 283 2.5E-63 T 14-09-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 AY555_RS03710 148df1b2d62794d64ac6320f5b8cb958 383 Gene3D G3DSA:2.40.40.10 194 381 1.1E-48 T 14-09-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain AY555_RS03710 148df1b2d62794d64ac6320f5b8cb958 383 Gene3D G3DSA:2.40.40.10 40 189 1.6E-22 T 14-09-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain AY555_RS03710 148df1b2d62794d64ac6320f5b8cb958 383 SUPERFAMILY SSF50685 34 381 1.26E-109 T 14-09-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain AY555_RS03680 6045bf4e5844a3f2404fe62179a42ffc 346 Pfam PF01628 HrcA protein C terminal domain 109 331 1.2E-56 T 14-09-2016 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 AY555_RS03680 6045bf4e5844a3f2404fe62179a42ffc 346 PIRSF PIRSF005485 4 346 4.2E-106 T 14-09-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 AY555_RS03680 6045bf4e5844a3f2404fe62179a42ffc 346 SUPERFAMILY SSF46785 6 87 2.22E-17 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS03680 6045bf4e5844a3f2404fe62179a42ffc 346 Gene3D G3DSA:3.30.450.40 181 345 1.0E-33 T 14-09-2016 IPR029016 GAF domain-like AY555_RS03680 6045bf4e5844a3f2404fe62179a42ffc 346 SUPERFAMILY SSF55781 77 345 5.89E-55 T 14-09-2016 IPR029016 GAF domain-like AY555_RS03680 6045bf4e5844a3f2404fe62179a42ffc 346 Gene3D G3DSA:1.10.10.10 5 89 3.9E-31 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS03680 6045bf4e5844a3f2404fe62179a42ffc 346 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 8 344 1.3E-91 T 14-09-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 AY555_RS03680 6045bf4e5844a3f2404fe62179a42ffc 346 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 6 338 28.233 T 14-09-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 AY555_RS03680 6045bf4e5844a3f2404fe62179a42ffc 346 PANTHER PTHR34824 1 345 5.3E-97 T 14-09-2016 AY555_RS09840 6f7eb237b15040060f22fab7215423b1 367 Pfam PF13579 Glycosyl transferase 4-like domain 15 181 8.1E-12 T 14-09-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AY555_RS09840 6f7eb237b15040060f22fab7215423b1 367 Gene3D G3DSA:3.40.50.2000 193 343 5.7E-14 T 14-09-2016 AY555_RS09840 6f7eb237b15040060f22fab7215423b1 367 Pfam PF13692 Glycosyl transferases group 1 200 332 2.7E-19 T 14-09-2016 AY555_RS09840 6f7eb237b15040060f22fab7215423b1 367 SUPERFAMILY SSF53756 2 363 3.1E-54 T 14-09-2016 AY555_RS09840 6f7eb237b15040060f22fab7215423b1 367 PANTHER PTHR12526 1 80 1.4E-29 T 14-09-2016 AY555_RS09840 6f7eb237b15040060f22fab7215423b1 367 PANTHER PTHR12526 100 364 1.4E-29 T 14-09-2016 AY555_RS06545 fe1d130f1b9a16721ef44114b298e58a 112 Gene3D G3DSA:2.40.10.180 18 105 1.9E-6 T 14-09-2016 IPR008018 Bacteriophage tail attachment protein FII GO:0019028|GO:0019068 AY555_RS01260 7ad3a3797dd9e21f7eede1ed9f31fc23 992 SMART SM00388 754 822 6.4E-21 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS01260 7ad3a3797dd9e21f7eede1ed9f31fc23 992 Gene3D G3DSA:3.30.565.10 808 984 1.8E-42 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS01260 7ad3a3797dd9e21f7eede1ed9f31fc23 992 Pfam PF05228 CHASE4 domain 109 264 2.5E-11 T 14-09-2016 IPR007892 CHASE4 AY555_RS01260 7ad3a3797dd9e21f7eede1ed9f31fc23 992 SUPERFAMILY SSF55874 811 980 4.71E-41 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS01260 7ad3a3797dd9e21f7eede1ed9f31fc23 992 SUPERFAMILY SSF47384 739 823 1.12E-22 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS01260 7ad3a3797dd9e21f7eede1ed9f31fc23 992 Gene3D G3DSA:1.10.287.130 760 807 9.7E-18 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS01260 7ad3a3797dd9e21f7eede1ed9f31fc23 992 SUPERFAMILY SSF55785 505 607 1.71E-6 T 14-09-2016 IPR000014 PAS domain AY555_RS01260 7ad3a3797dd9e21f7eede1ed9f31fc23 992 Gene3D G3DSA:3.30.450.20 395 488 1.9E-6 T 14-09-2016 AY555_RS01260 7ad3a3797dd9e21f7eede1ed9f31fc23 992 PRINTS PR00344 Bacterial sensor protein C-terminal signature 908 922 8.1E-15 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS01260 7ad3a3797dd9e21f7eede1ed9f31fc23 992 PRINTS PR00344 Bacterial sensor protein C-terminal signature 926 936 8.1E-15 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS01260 7ad3a3797dd9e21f7eede1ed9f31fc23 992 PRINTS PR00344 Bacterial sensor protein C-terminal signature 942 960 8.1E-15 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS01260 7ad3a3797dd9e21f7eede1ed9f31fc23 992 PRINTS PR00344 Bacterial sensor protein C-terminal signature 966 979 8.1E-15 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS01260 7ad3a3797dd9e21f7eede1ed9f31fc23 992 Gene3D G3DSA:3.30.450.20 500 607 1.8E-4 T 14-09-2016 AY555_RS01260 7ad3a3797dd9e21f7eede1ed9f31fc23 992 SMART SM00086 692 734 0.88 T 14-09-2016 IPR001610 PAC motif AY555_RS01260 7ad3a3797dd9e21f7eede1ed9f31fc23 992 SMART SM00086 569 609 6.8 T 14-09-2016 IPR001610 PAC motif AY555_RS01260 7ad3a3797dd9e21f7eede1ed9f31fc23 992 Pfam PF13426 PAS domain 399 485 0.021 T 14-09-2016 IPR000014 PAS domain AY555_RS01260 7ad3a3797dd9e21f7eede1ed9f31fc23 992 Pfam PF13426 PAS domain 511 607 0.0017 T 14-09-2016 IPR000014 PAS domain AY555_RS01260 7ad3a3797dd9e21f7eede1ed9f31fc23 992 Pfam PF00512 His Kinase A (phospho-acceptor) domain 754 822 7.1E-18 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS01260 7ad3a3797dd9e21f7eede1ed9f31fc23 992 SUPERFAMILY SSF55785 619 731 4.89E-15 T 14-09-2016 IPR000014 PAS domain AY555_RS01260 7ad3a3797dd9e21f7eede1ed9f31fc23 992 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 870 981 4.0E-23 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS01260 7ad3a3797dd9e21f7eede1ed9f31fc23 992 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 622 741 2.6E-17 T 14-09-2016 IPR000014 PAS domain AY555_RS01260 7ad3a3797dd9e21f7eede1ed9f31fc23 992 Gene3D G3DSA:3.30.450.20 622 759 4.4E-18 T 14-09-2016 AY555_RS01260 7ad3a3797dd9e21f7eede1ed9f31fc23 992 PANTHER PTHR24423 605 988 1.9E-91 T 14-09-2016 AY555_RS01260 7ad3a3797dd9e21f7eede1ed9f31fc23 992 PANTHER PTHR24423 101 157 1.9E-91 T 14-09-2016 AY555_RS01260 7ad3a3797dd9e21f7eede1ed9f31fc23 992 Pfam PF00989 PAS fold 622 731 2.8E-11 T 14-09-2016 IPR013767 PAS fold GO:0006355 AY555_RS01260 7ad3a3797dd9e21f7eede1ed9f31fc23 992 SMART SM00387 869 982 2.4E-33 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS01260 7ad3a3797dd9e21f7eede1ed9f31fc23 992 SMART SM00091 500 568 71.0 T 14-09-2016 IPR000014 PAS domain AY555_RS01260 7ad3a3797dd9e21f7eede1ed9f31fc23 992 SMART SM00091 385 450 15.0 T 14-09-2016 IPR000014 PAS domain AY555_RS01260 7ad3a3797dd9e21f7eede1ed9f31fc23 992 SMART SM00091 621 689 0.0036 T 14-09-2016 IPR000014 PAS domain AY555_RS01260 7ad3a3797dd9e21f7eede1ed9f31fc23 992 SUPERFAMILY SSF55785 398 487 4.89E-6 T 14-09-2016 IPR000014 PAS domain AY555_RS00905 2baf5e82040cd48f05b28eb58248b247 181 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 2 180 43.378 T 14-09-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00905 2baf5e82040cd48f05b28eb58248b247 181 PIRSF PIRSF002161 1 181 3.2E-67 T 14-09-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 AY555_RS00905 2baf5e82040cd48f05b28eb58248b247 181 PANTHER PTHR11994 1 178 6.4E-91 T 14-09-2016 AY555_RS00905 2baf5e82040cd48f05b28eb58248b247 181 Pfam PF00673 ribosomal L5P family C-terminus 86 178 1.7E-41 T 14-09-2016 IPR031309 Ribosomal protein L5, C-terminal AY555_RS00905 2baf5e82040cd48f05b28eb58248b247 181 Gene3D G3DSA:3.30.1440.10 3 178 1.8E-79 T 14-09-2016 IPR022803 Ribosomal protein L5 domain AY555_RS00905 2baf5e82040cd48f05b28eb58248b247 181 ProSitePatterns PS00358 Ribosomal protein L5 signature. 58 74 - T 14-09-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00905 2baf5e82040cd48f05b28eb58248b247 181 SUPERFAMILY SSF55282 4 179 6.36E-78 T 14-09-2016 IPR022803 Ribosomal protein L5 domain AY555_RS00905 2baf5e82040cd48f05b28eb58248b247 181 Pfam PF00281 Ribosomal protein L5 25 81 3.9E-28 T 14-09-2016 IPR031310 Ribosomal protein L5, N-terminal AY555_RS02065 e32648340bb733438659200d7516b680 335 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 158 314 3.4E-64 T 14-09-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 AY555_RS02065 e32648340bb733438659200d7516b680 335 Gene3D G3DSA:3.30.360.10 162 316 2.4E-74 T 14-09-2016 AY555_RS02065 e32648340bb733438659200d7516b680 335 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 151 158 - T 14-09-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 AY555_RS02065 e32648340bb733438659200d7516b680 335 PANTHER PTHR10836:SF50 1 331 2.2E-202 T 14-09-2016 AY555_RS02065 e32648340bb733438659200d7516b680 335 SUPERFAMILY SSF55347 153 315 3.57E-70 T 14-09-2016 AY555_RS02065 e32648340bb733438659200d7516b680 335 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 153 1.7E-58 T 14-09-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 AY555_RS02065 e32648340bb733438659200d7516b680 335 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 326 4.5E-131 T 14-09-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS02065 e32648340bb733438659200d7516b680 335 PANTHER PTHR10836 1 331 2.2E-202 T 14-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 AY555_RS02065 e32648340bb733438659200d7516b680 335 SUPERFAMILY SSF51735 1 152 5.8E-64 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS02065 e32648340bb733438659200d7516b680 335 SMART SM00846 3 153 1.2E-94 T 14-09-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 AY555_RS02065 e32648340bb733438659200d7516b680 335 PIRSF PIRSF000149 1 335 1.2E-136 T 14-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 AY555_RS02065 e32648340bb733438659200d7516b680 335 Gene3D G3DSA:3.40.50.720 1 161 2.5E-74 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS02065 e32648340bb733438659200d7516b680 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 4.8E-39 T 14-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 AY555_RS02065 e32648340bb733438659200d7516b680 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 111 124 4.8E-39 T 14-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 AY555_RS02065 e32648340bb733438659200d7516b680 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 147 165 4.8E-39 T 14-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 AY555_RS02065 e32648340bb733438659200d7516b680 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 4.8E-39 T 14-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 AY555_RS02065 e32648340bb733438659200d7516b680 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 174 190 4.8E-39 T 14-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 AY555_RS04605 f416e52157c814093ec2948184565bb8 892 Pfam PF00330 Aconitase family (aconitate hydratase) 78 561 2.6E-185 T 14-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AY555_RS04605 f416e52157c814093ec2948184565bb8 892 Gene3D G3DSA:3.30.499.10 25 252 1.2E-79 T 14-09-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AY555_RS04605 f416e52157c814093ec2948184565bb8 892 PANTHER PTHR11670:SF1 666 711 0.0 T 14-09-2016 AY555_RS04605 f416e52157c814093ec2948184565bb8 892 PANTHER PTHR11670:SF1 10 396 0.0 T 14-09-2016 AY555_RS04605 f416e52157c814093ec2948184565bb8 892 PANTHER PTHR11670 750 892 0.0 T 14-09-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AY555_RS04605 f416e52157c814093ec2948184565bb8 892 PANTHER PTHR11670 415 650 0.0 T 14-09-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AY555_RS04605 f416e52157c814093ec2948184565bb8 892 Gene3D G3DSA:3.40.1060.10 253 370 2.8E-37 T 14-09-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AY555_RS04605 f416e52157c814093ec2948184565bb8 892 Gene3D G3DSA:3.30.499.10 372 574 5.2E-62 T 14-09-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AY555_RS04605 f416e52157c814093ec2948184565bb8 892 Gene3D G3DSA:3.20.19.10 636 890 1.2E-82 T 14-09-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AY555_RS04605 f416e52157c814093ec2948184565bb8 892 ProSitePatterns PS00450 Aconitase family signature 1. 426 442 - T 14-09-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AY555_RS04605 f416e52157c814093ec2948184565bb8 892 PANTHER PTHR11670 666 711 0.0 T 14-09-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AY555_RS04605 f416e52157c814093ec2948184565bb8 892 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 21 890 0.0 T 14-09-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 AY555_RS04605 f416e52157c814093ec2948184565bb8 892 SUPERFAMILY SSF52016 629 890 3.14E-89 T 14-09-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AY555_RS04605 f416e52157c814093ec2948184565bb8 892 PRINTS PR00415 Aconitase family signature 173 181 9.0E-42 T 14-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AY555_RS04605 f416e52157c814093ec2948184565bb8 892 PRINTS PR00415 Aconitase family signature 149 162 9.0E-42 T 14-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AY555_RS04605 f416e52157c814093ec2948184565bb8 892 PRINTS PR00415 Aconitase family signature 430 441 9.0E-42 T 14-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AY555_RS04605 f416e52157c814093ec2948184565bb8 892 PRINTS PR00415 Aconitase family signature 206 219 9.0E-42 T 14-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AY555_RS04605 f416e52157c814093ec2948184565bb8 892 PRINTS PR00415 Aconitase family signature 220 235 9.0E-42 T 14-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AY555_RS04605 f416e52157c814093ec2948184565bb8 892 PRINTS PR00415 Aconitase family signature 492 505 9.0E-42 T 14-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AY555_RS04605 f416e52157c814093ec2948184565bb8 892 PRINTS PR00415 Aconitase family signature 296 309 9.0E-42 T 14-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AY555_RS04605 f416e52157c814093ec2948184565bb8 892 PRINTS PR00415 Aconitase family signature 375 389 9.0E-42 T 14-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AY555_RS04605 f416e52157c814093ec2948184565bb8 892 PRINTS PR00415 Aconitase family signature 282 295 9.0E-42 T 14-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AY555_RS04605 f416e52157c814093ec2948184565bb8 892 PANTHER PTHR11670:SF1 750 892 0.0 T 14-09-2016 AY555_RS04605 f416e52157c814093ec2948184565bb8 892 PANTHER PTHR11670:SF1 415 650 0.0 T 14-09-2016 AY555_RS04605 f416e52157c814093ec2948184565bb8 892 PANTHER PTHR11670 10 396 0.0 T 14-09-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AY555_RS04605 f416e52157c814093ec2948184565bb8 892 Pfam PF00694 Aconitase C-terminal domain 691 818 2.4E-47 T 14-09-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AY555_RS04605 f416e52157c814093ec2948184565bb8 892 ProSitePatterns PS01244 Aconitase family signature 2. 492 505 - T 14-09-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AY555_RS04605 f416e52157c814093ec2948184565bb8 892 SUPERFAMILY SSF53732 7 625 2.62E-226 T 14-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AY555_RS00830 abc843beadf5b85523add1ed02844c0a 435 SMART SM00382 47 163 4.5E-14 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS00830 abc843beadf5b85523add1ed02844c0a 435 Gene3D G3DSA:1.10.8.60 153 212 4.5E-4 T 14-09-2016 AY555_RS00830 abc843beadf5b85523add1ed02844c0a 435 Gene3D G3DSA:1.10.3710.10 336 427 1.1E-30 T 14-09-2016 AY555_RS00830 abc843beadf5b85523add1ed02844c0a 435 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 15 136 1.8E-14 T 14-09-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 AY555_RS00830 abc843beadf5b85523add1ed02844c0a 435 SUPERFAMILY SSF52540 11 215 7.04E-40 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS00830 abc843beadf5b85523add1ed02844c0a 435 SUPERFAMILY SSF48019 241 424 1.83E-74 T 14-09-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 AY555_RS00830 abc843beadf5b85523add1ed02844c0a 435 Gene3D G3DSA:3.40.50.300 10 152 4.3E-28 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS00830 abc843beadf5b85523add1ed02844c0a 435 Gene3D G3DSA:1.20.272.10 237 335 3.7E-44 T 14-09-2016 AY555_RS00830 abc843beadf5b85523add1ed02844c0a 435 PANTHER PTHR13779:SF7 12 428 4.6E-182 T 14-09-2016 AY555_RS00830 abc843beadf5b85523add1ed02844c0a 435 Pfam PF12002 MgsA AAA+ ATPase C terminal 256 421 8.8E-68 T 14-09-2016 IPR021886 MgsA AAA+ ATPase C-terminal AY555_RS00830 abc843beadf5b85523add1ed02844c0a 435 PANTHER PTHR13779 12 428 4.6E-182 T 14-09-2016 AY555_RS00830 abc843beadf5b85523add1ed02844c0a 435 Pfam PF16193 AAA C-terminal domain 182 255 1.3E-16 T 14-09-2016 IPR032423 AAA ATPase, C-terminal domain AY555_RS00475 f55fbd122396d91ed5bfa90fb24fed3f 581 PANTHER PTHR10909:SF296 1 473 6.2E-181 T 14-09-2016 AY555_RS00475 f55fbd122396d91ed5bfa90fb24fed3f 581 Gene3D G3DSA:2.40.110.10 160 269 5.4E-25 T 14-09-2016 AY555_RS00475 f55fbd122396d91ed5bfa90fb24fed3f 581 Gene3D G3DSA:1.20.140.10 270 459 1.5E-55 T 14-09-2016 AY555_RS00475 f55fbd122396d91ed5bfa90fb24fed3f 581 SUPERFAMILY SSF56645 35 280 5.76E-57 T 14-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AY555_RS00475 f55fbd122396d91ed5bfa90fb24fed3f 581 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 70 156 1.7E-12 T 14-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AY555_RS00475 f55fbd122396d91ed5bfa90fb24fed3f 581 SUPERFAMILY SSF47203 287 467 6.6E-46 T 14-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AY555_RS00475 f55fbd122396d91ed5bfa90fb24fed3f 581 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 161 267 9.3E-14 T 14-09-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AY555_RS00475 f55fbd122396d91ed5bfa90fb24fed3f 581 PANTHER PTHR10909 1 473 6.2E-181 T 14-09-2016 AY555_RS00475 f55fbd122396d91ed5bfa90fb24fed3f 581 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 282 446 7.5E-27 T 14-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AY555_RS00475 f55fbd122396d91ed5bfa90fb24fed3f 581 Gene3D G3DSA:1.10.540.10 37 158 4.7E-17 T 14-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AY555_RS00475 f55fbd122396d91ed5bfa90fb24fed3f 581 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 478 577 7.8E-14 T 14-09-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AY555_RS06060 c082bef378fe7475d9b13e170d66e55f 245 PANTHER PTHR31881 6 229 7.2E-55 T 14-09-2016 AY555_RS06060 c082bef378fe7475d9b13e170d66e55f 245 PANTHER PTHR31881:SF3 6 229 7.2E-55 T 14-09-2016 AY555_RS06060 c082bef378fe7475d9b13e170d66e55f 245 Pfam PF04654 Protein of unknown function, DUF599 17 223 3.1E-52 T 14-09-2016 IPR006747 Protein of unknown function DUF599 AY555_RS05880 e88cdc37740be0a386099d58d7e375ed 419 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 262 376 2.6E-39 T 14-09-2016 IPR014031 Beta-ketoacyl synthase, C-terminal AY555_RS05880 e88cdc37740be0a386099d58d7e375ed 419 PANTHER PTHR11712 1 416 5.9E-220 T 14-09-2016 AY555_RS05880 e88cdc37740be0a386099d58d7e375ed 419 PANTHER PTHR11712:SF273 1 416 5.9E-220 T 14-09-2016 AY555_RS05880 e88cdc37740be0a386099d58d7e375ed 419 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 161 177 - T 14-09-2016 IPR018201 Beta-ketoacyl synthase, active site AY555_RS05880 e88cdc37740be0a386099d58d7e375ed 419 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 416 2.6E-195 T 14-09-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 AY555_RS05880 e88cdc37740be0a386099d58d7e375ed 419 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 254 1.2E-64 T 14-09-2016 IPR014030 Beta-ketoacyl synthase, N-terminal AY555_RS05880 e88cdc37740be0a386099d58d7e375ed 419 SMART SM00825 Beta-ketoacyl synthase 4 419 2.7E-17 T 14-09-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AY555_RS05880 e88cdc37740be0a386099d58d7e375ed 419 SUPERFAMILY SSF53901 1 261 1.68E-77 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AY555_RS05880 e88cdc37740be0a386099d58d7e375ed 419 PIRSF PIRSF000447 1 419 2.7E-190 T 14-09-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 AY555_RS05880 e88cdc37740be0a386099d58d7e375ed 419 Gene3D G3DSA:3.40.47.10 270 418 1.8E-60 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AY555_RS05880 e88cdc37740be0a386099d58d7e375ed 419 SUPERFAMILY SSF53901 222 417 3.15E-72 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AY555_RS05880 e88cdc37740be0a386099d58d7e375ed 419 Gene3D G3DSA:3.40.47.10 1 267 4.0E-79 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AY555_RS08355 38d90b515cfaec31441a804dff936c76 895 SUPERFAMILY SSF56059 490 703 1.15E-38 T 14-09-2016 AY555_RS08355 38d90b515cfaec31441a804dff936c76 895 Gene3D G3DSA:3.40.630.30 729 883 7.0E-22 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AY555_RS08355 38d90b515cfaec31441a804dff936c76 895 Pfam PF13549 ATP-grasp domain 482 703 1.5E-83 T 14-09-2016 AY555_RS08355 38d90b515cfaec31441a804dff936c76 895 Gene3D G3DSA:3.40.50.720 4 134 4.5E-30 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS08355 38d90b515cfaec31441a804dff936c76 895 SUPERFAMILY SSF51735 2 142 4.73E-29 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS08355 38d90b515cfaec31441a804dff936c76 895 Gene3D G3DSA:3.30.470.20 494 536 5.4E-4 T 14-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AY555_RS08355 38d90b515cfaec31441a804dff936c76 895 Gene3D G3DSA:3.40.50.261 295 447 6.1E-19 T 14-09-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AY555_RS08355 38d90b515cfaec31441a804dff936c76 895 SMART SM00881 9 104 6.8E-28 T 14-09-2016 IPR003781 CoA-binding GO:0048037 AY555_RS08355 38d90b515cfaec31441a804dff936c76 895 Pfam PF13380 CoA binding domain 14 137 8.0E-18 T 14-09-2016 IPR003781 CoA-binding GO:0048037 AY555_RS08355 38d90b515cfaec31441a804dff936c76 895 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 154 291 5.1E-57 T 14-09-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain AY555_RS08355 38d90b515cfaec31441a804dff936c76 895 PANTHER PTHR11117 30 708 1.0E-263 T 14-09-2016 AY555_RS08355 38d90b515cfaec31441a804dff936c76 895 SUPERFAMILY SSF52210 297 455 3.14E-40 T 14-09-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AY555_RS08355 38d90b515cfaec31441a804dff936c76 895 PANTHER PTHR11117:SF8 30 708 1.0E-263 T 14-09-2016 AY555_RS08355 38d90b515cfaec31441a804dff936c76 895 SUPERFAMILY SSF52210 132 297 1.57E-45 T 14-09-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AY555_RS08355 38d90b515cfaec31441a804dff936c76 895 Pfam PF13302 Acetyltransferase (GNAT) domain 736 875 2.8E-9 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AY555_RS08355 38d90b515cfaec31441a804dff936c76 895 SUPERFAMILY SSF55729 730 878 2.34E-19 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AY555_RS08355 38d90b515cfaec31441a804dff936c76 895 Gene3D G3DSA:3.40.50.261 135 290 3.0E-32 T 14-09-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AY555_RS01740 9d9cefafe34af75abf5ce708d0dc9779 529 PRINTS PR00834 HtrA/DegQ protease family signature 246 263 1.4E-53 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AY555_RS01740 9d9cefafe34af75abf5ce708d0dc9779 529 PRINTS PR00834 HtrA/DegQ protease family signature 268 285 1.4E-53 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AY555_RS01740 9d9cefafe34af75abf5ce708d0dc9779 529 PRINTS PR00834 HtrA/DegQ protease family signature 150 162 1.4E-53 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AY555_RS01740 9d9cefafe34af75abf5ce708d0dc9779 529 PRINTS PR00834 HtrA/DegQ protease family signature 212 236 1.4E-53 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AY555_RS01740 9d9cefafe34af75abf5ce708d0dc9779 529 PRINTS PR00834 HtrA/DegQ protease family signature 354 366 1.4E-53 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AY555_RS01740 9d9cefafe34af75abf5ce708d0dc9779 529 PRINTS PR00834 HtrA/DegQ protease family signature 171 191 1.4E-53 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AY555_RS01740 9d9cefafe34af75abf5ce708d0dc9779 529 Gene3D G3DSA:2.30.42.10 316 411 2.9E-28 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AY555_RS01740 9d9cefafe34af75abf5ce708d0dc9779 529 Gene3D G3DSA:2.40.10.10 128 206 4.9E-36 T 14-09-2016 AY555_RS01740 9d9cefafe34af75abf5ce708d0dc9779 529 Gene3D G3DSA:2.40.10.10 70 96 4.9E-36 T 14-09-2016 AY555_RS01740 9d9cefafe34af75abf5ce708d0dc9779 529 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 434 510 3.7E-9 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AY555_RS01740 9d9cefafe34af75abf5ce708d0dc9779 529 Pfam PF13180 PDZ domain 314 405 1.1E-12 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AY555_RS01740 9d9cefafe34af75abf5ce708d0dc9779 529 PANTHER PTHR22939 123 409 4.4E-114 T 14-09-2016 AY555_RS01740 9d9cefafe34af75abf5ce708d0dc9779 529 PANTHER PTHR22939 69 98 4.4E-114 T 14-09-2016 AY555_RS01740 9d9cefafe34af75abf5ce708d0dc9779 529 Gene3D G3DSA:2.40.10.10 207 315 3.8E-45 T 14-09-2016 AY555_RS01740 9d9cefafe34af75abf5ce708d0dc9779 529 SUPERFAMILY SSF50494 76 306 7.43E-67 T 14-09-2016 IPR009003 Peptidase S1, PA clan AY555_RS01740 9d9cefafe34af75abf5ce708d0dc9779 529 SUPERFAMILY SSF50156 272 397 8.02E-23 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AY555_RS01740 9d9cefafe34af75abf5ce708d0dc9779 529 Gene3D G3DSA:2.30.42.10 434 513 1.6E-14 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AY555_RS01740 9d9cefafe34af75abf5ce708d0dc9779 529 PANTHER PTHR22939:SF79 69 98 4.4E-114 T 14-09-2016 AY555_RS01740 9d9cefafe34af75abf5ce708d0dc9779 529 SUPERFAMILY SSF50156 435 524 3.29E-12 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AY555_RS01740 9d9cefafe34af75abf5ce708d0dc9779 529 Pfam PF13365 Trypsin-like peptidase domain 141 275 8.0E-37 T 14-09-2016 AY555_RS01740 9d9cefafe34af75abf5ce708d0dc9779 529 PANTHER PTHR22939:SF79 123 409 4.4E-114 T 14-09-2016 AY555_RS01740 9d9cefafe34af75abf5ce708d0dc9779 529 SMART SM00228 314 396 2.0E-13 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AY555_RS01740 9d9cefafe34af75abf5ce708d0dc9779 529 SMART SM00228 433 518 7.3E-8 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AY555_RS01740 9d9cefafe34af75abf5ce708d0dc9779 529 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 77 515 4.2E-148 T 14-09-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 AY555_RS07010 3a45f36f481242b6f3d9bc67594605db 607 Gene3D G3DSA:3.60.20.10 2 233 1.7E-75 T 14-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AY555_RS07010 3a45f36f481242b6f3d9bc67594605db 607 Pfam PF13522 Glutamine amidotransferase domain 64 192 5.2E-23 T 14-09-2016 AY555_RS07010 3a45f36f481242b6f3d9bc67594605db 607 Gene3D G3DSA:3.40.50.10490 440 607 2.6E-65 T 14-09-2016 AY555_RS07010 3a45f36f481242b6f3d9bc67594605db 607 PANTHER PTHR10937 1 607 0.0 T 14-09-2016 AY555_RS07010 3a45f36f481242b6f3d9bc67594605db 607 PANTHER PTHR10937:SF0 1 607 0.0 T 14-09-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 AY555_RS07010 3a45f36f481242b6f3d9bc67594605db 607 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 607 39.975 T 14-09-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 AY555_RS07010 3a45f36f481242b6f3d9bc67594605db 607 Pfam PF01380 SIS domain 287 414 5.9E-32 T 14-09-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 AY555_RS07010 3a45f36f481242b6f3d9bc67594605db 607 Pfam PF01380 SIS domain 461 589 3.1E-25 T 14-09-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 AY555_RS07010 3a45f36f481242b6f3d9bc67594605db 607 SUPERFAMILY SSF56235 2 233 2.06E-73 T 14-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AY555_RS07010 3a45f36f481242b6f3d9bc67594605db 607 SUPERFAMILY SSF53697 245 607 1.95E-112 T 14-09-2016 AY555_RS07010 3a45f36f481242b6f3d9bc67594605db 607 Gene3D G3DSA:3.40.50.10490 243 439 7.7E-61 T 14-09-2016 AY555_RS07010 3a45f36f481242b6f3d9bc67594605db 607 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 607 3.8E-248 T 14-09-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 AY555_RS05140 b3f4e4627006d142afcf51940318e69b 173 Gene3D G3DSA:3.30.110.10 84 173 1.8E-38 T 14-09-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 AY555_RS05140 b3f4e4627006d142afcf51940318e69b 173 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 12 173 8.3E-69 T 14-09-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 AY555_RS05140 b3f4e4627006d142afcf51940318e69b 173 SUPERFAMILY SSF55200 87 173 1.96E-33 T 14-09-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 AY555_RS05140 b3f4e4627006d142afcf51940318e69b 173 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 12 81 3.7E-32 T 14-09-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 AY555_RS05140 b3f4e4627006d142afcf51940318e69b 173 SUPERFAMILY SSF54364 9 83 1.96E-30 T 14-09-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 AY555_RS05140 b3f4e4627006d142afcf51940318e69b 173 PANTHER PTHR10938 5 173 1.5E-67 T 14-09-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 AY555_RS05140 b3f4e4627006d142afcf51940318e69b 173 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 88 173 7.3E-39 T 14-09-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 AY555_RS05140 b3f4e4627006d142afcf51940318e69b 173 ProSitePatterns PS00938 Initiation factor 3 signature. 63 76 - T 14-09-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 AY555_RS05140 b3f4e4627006d142afcf51940318e69b 173 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 5 173 28.792 T 14-09-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 AY555_RS05140 b3f4e4627006d142afcf51940318e69b 173 Gene3D G3DSA:3.10.20.80 7 83 1.6E-36 T 14-09-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 AY555_RS02495 fbb99c46016e2c84406ab8156cbe4de7 501 SMART SM00091 247 313 0.98 T 14-09-2016 IPR000014 PAS domain AY555_RS02495 fbb99c46016e2c84406ab8156cbe4de7 501 SMART SM00091 371 441 0.26 T 14-09-2016 IPR000014 PAS domain AY555_RS02495 fbb99c46016e2c84406ab8156cbe4de7 501 PANTHER PTHR24423 225 406 1.1E-17 T 14-09-2016 AY555_RS02495 fbb99c46016e2c84406ab8156cbe4de7 501 Pfam PF00989 PAS fold 261 356 2.8E-6 T 14-09-2016 IPR013767 PAS fold GO:0006355 AY555_RS02495 fbb99c46016e2c84406ab8156cbe4de7 501 SUPERFAMILY SSF55785 262 368 1.15E-17 T 14-09-2016 IPR000014 PAS domain AY555_RS02495 fbb99c46016e2c84406ab8156cbe4de7 501 Gene3D G3DSA:3.30.450.20 357 406 7.2E-10 T 14-09-2016 AY555_RS02495 fbb99c46016e2c84406ab8156cbe4de7 501 Gene3D G3DSA:3.30.450.20 238 356 5.7E-18 T 14-09-2016 AY555_RS02495 fbb99c46016e2c84406ab8156cbe4de7 501 Pfam PF13188 PAS domain 372 407 1.6E-5 T 14-09-2016 IPR000014 PAS domain AY555_RS02495 fbb99c46016e2c84406ab8156cbe4de7 501 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 243 366 2.3E-18 T 14-09-2016 IPR000014 PAS domain AY555_RS02495 fbb99c46016e2c84406ab8156cbe4de7 501 SUPERFAMILY SSF55785 355 406 1.74E-9 T 14-09-2016 IPR000014 PAS domain AY555_RS08460 2751958f39a4f5a0bd49d3523c841cc9 209 PANTHER PTHR10344 5 203 2.1E-61 T 14-09-2016 AY555_RS08460 2751958f39a4f5a0bd49d3523c841cc9 209 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 199 4.4E-51 T 14-09-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 AY555_RS08460 2751958f39a4f5a0bd49d3523c841cc9 209 Hamap MF_00165 Thymidylate kinase [tmk]. 5 207 29.645 T 14-09-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 AY555_RS08460 2751958f39a4f5a0bd49d3523c841cc9 209 Gene3D G3DSA:3.40.50.300 5 207 1.2E-66 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08460 2751958f39a4f5a0bd49d3523c841cc9 209 SUPERFAMILY SSF52540 4 205 3.82E-56 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08460 2751958f39a4f5a0bd49d3523c841cc9 209 ProSitePatterns PS01331 Thymidylate kinase signature. 94 106 - T 14-09-2016 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 AY555_RS08460 2751958f39a4f5a0bd49d3523c841cc9 209 Pfam PF02223 Thymidylate kinase 9 199 1.1E-48 T 14-09-2016 AY555_RS06930 d48d072d14bc3054b6f83577604f6afd 297 Pfam PF13354 Beta-lactamase enzyme family 61 269 2.2E-41 T 14-09-2016 AY555_RS06930 d48d072d14bc3054b6f83577604f6afd 297 PRINTS PR00118 Beta-lactamase class A signature 176 201 2.3E-70 T 14-09-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AY555_RS06930 d48d072d14bc3054b6f83577604f6afd 297 PRINTS PR00118 Beta-lactamase class A signature 72 89 2.3E-70 T 14-09-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AY555_RS06930 d48d072d14bc3054b6f83577604f6afd 297 PRINTS PR00118 Beta-lactamase class A signature 212 227 2.3E-70 T 14-09-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AY555_RS06930 d48d072d14bc3054b6f83577604f6afd 297 PRINTS PR00118 Beta-lactamase class A signature 41 65 2.3E-70 T 14-09-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AY555_RS06930 d48d072d14bc3054b6f83577604f6afd 297 PRINTS PR00118 Beta-lactamase class A signature 150 174 2.3E-70 T 14-09-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AY555_RS06930 d48d072d14bc3054b6f83577604f6afd 297 PRINTS PR00118 Beta-lactamase class A signature 114 139 2.3E-70 T 14-09-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AY555_RS06930 d48d072d14bc3054b6f83577604f6afd 297 PRINTS PR00118 Beta-lactamase class A signature 229 244 2.3E-70 T 14-09-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AY555_RS06930 d48d072d14bc3054b6f83577604f6afd 297 PANTHER PTHR35333:SF2 29 297 3.6E-94 T 14-09-2016 AY555_RS06930 d48d072d14bc3054b6f83577604f6afd 297 ProSitePatterns PS00146 Beta-lactamase class-A active site. 74 89 - T 14-09-2016 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 AY555_RS06930 d48d072d14bc3054b6f83577604f6afd 297 Gene3D G3DSA:3.40.710.10 40 296 7.8E-102 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AY555_RS06930 d48d072d14bc3054b6f83577604f6afd 297 PANTHER PTHR35333 29 297 3.6E-94 T 14-09-2016 AY555_RS06930 d48d072d14bc3054b6f83577604f6afd 297 SUPERFAMILY SSF56601 40 294 3.32E-77 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AY555_RS03460 eb2a59cb203185b98ea0e700ece869ae 527 Gene3D G3DSA:3.40.1450.10 83 311 9.1E-79 T 14-09-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 AY555_RS03460 eb2a59cb203185b98ea0e700ece869ae 527 PIRSF PIRSF001492 4 515 7.1E-191 T 14-09-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 AY555_RS03460 eb2a59cb203185b98ea0e700ece869ae 527 Pfam PF01676 Metalloenzyme superfamily 10 501 3.2E-71 T 14-09-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 AY555_RS03460 eb2a59cb203185b98ea0e700ece869ae 527 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 87 297 4.1E-67 T 14-09-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 AY555_RS03460 eb2a59cb203185b98ea0e700ece869ae 527 Gene3D G3DSA:3.40.720.10 315 513 2.3E-80 T 14-09-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AY555_RS03460 eb2a59cb203185b98ea0e700ece869ae 527 Gene3D G3DSA:3.40.720.10 10 82 2.3E-80 T 14-09-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AY555_RS03460 eb2a59cb203185b98ea0e700ece869ae 527 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 10 512 4.5E-197 T 14-09-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 AY555_RS03460 eb2a59cb203185b98ea0e700ece869ae 527 SUPERFAMILY SSF64158 82 303 4.32E-73 T 14-09-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 AY555_RS03460 eb2a59cb203185b98ea0e700ece869ae 527 SUPERFAMILY SSF53649 315 512 7.46E-70 T 14-09-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AY555_RS03460 eb2a59cb203185b98ea0e700ece869ae 527 SUPERFAMILY SSF53649 9 82 7.46E-70 T 14-09-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AY555_RS03460 eb2a59cb203185b98ea0e700ece869ae 527 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 9 513 46.652 T 14-09-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 AY555_RS03460 eb2a59cb203185b98ea0e700ece869ae 527 PANTHER PTHR31637:SF0 1 516 1.3E-232 T 14-09-2016 AY555_RS03460 eb2a59cb203185b98ea0e700ece869ae 527 PANTHER PTHR31637 1 516 1.3E-232 T 14-09-2016 AY555_RS00720 acdcc66ce0f6ba1987bc4d40c8eecb06 320 Pfam PF03060 Nitronate monooxygenase 14 297 1.4E-26 T 14-09-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AY555_RS00720 acdcc66ce0f6ba1987bc4d40c8eecb06 320 PANTHER PTHR32332:SF21 3 317 1.8E-154 T 14-09-2016 AY555_RS00720 acdcc66ce0f6ba1987bc4d40c8eecb06 320 PANTHER PTHR32332 3 317 1.8E-154 T 14-09-2016 AY555_RS00720 acdcc66ce0f6ba1987bc4d40c8eecb06 320 SUPERFAMILY SSF51412 10 293 2.2E-55 T 14-09-2016 AY555_RS00720 acdcc66ce0f6ba1987bc4d40c8eecb06 320 Gene3D G3DSA:3.20.20.70 10 294 2.5E-51 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS05945 1d8dc74cbd87f2c5a40e7d287212050a 282 Pfam PF01715 IPP transferase 34 277 3.8E-60 T 14-09-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 AY555_RS05945 1d8dc74cbd87f2c5a40e7d287212050a 282 Gene3D G3DSA:3.40.50.300 2 168 1.6E-44 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS05945 1d8dc74cbd87f2c5a40e7d287212050a 282 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 2 278 5.8E-64 T 14-09-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 AY555_RS05945 1d8dc74cbd87f2c5a40e7d287212050a 282 PANTHER PTHR11088 1 275 2.3E-78 T 14-09-2016 AY555_RS05945 1d8dc74cbd87f2c5a40e7d287212050a 282 SUPERFAMILY SSF52540 1 145 1.46E-17 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS05945 1d8dc74cbd87f2c5a40e7d287212050a 282 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 1 279 24.717 T 14-09-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 AY555_RS05945 1d8dc74cbd87f2c5a40e7d287212050a 282 Gene3D G3DSA:1.10.287.890 196 277 2.2E-25 T 14-09-2016 AY555_RS05945 1d8dc74cbd87f2c5a40e7d287212050a 282 SUPERFAMILY SSF52540 163 212 6.38E-6 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS05945 1d8dc74cbd87f2c5a40e7d287212050a 282 SUPERFAMILY SSF52540 1 34 6.38E-6 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS09300 9bb5d954e516c3bd8d38fa2efac8a377 354 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 328 6.8E-97 T 14-09-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AY555_RS09300 9bb5d954e516c3bd8d38fa2efac8a377 354 PIRSF PIRSF001359 1 329 5.5E-81 T 14-09-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AY555_RS09300 9bb5d954e516c3bd8d38fa2efac8a377 354 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 4 346 4.0E-195 T 14-09-2016 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 AY555_RS09300 9bb5d954e516c3bd8d38fa2efac8a377 354 SUPERFAMILY SSF51569 3 328 4.1E-102 T 14-09-2016 AY555_RS09300 9bb5d954e516c3bd8d38fa2efac8a377 354 PANTHER PTHR30304 1 345 1.3E-113 T 14-09-2016 AY555_RS09300 9bb5d954e516c3bd8d38fa2efac8a377 354 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 72 85 - T 14-09-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AY555_RS09300 9bb5d954e516c3bd8d38fa2efac8a377 354 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 327 2.4E-91 T 14-09-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AY555_RS09300 9bb5d954e516c3bd8d38fa2efac8a377 354 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 14-09-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AY555_RS09300 9bb5d954e516c3bd8d38fa2efac8a377 354 Gene3D G3DSA:3.20.20.70 1 335 1.1E-103 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS00860 db9dd9fc940b715c5bf03e8bf31f99be 218 PRINTS PR00094 Adenylate kinase signature 84 100 9.3E-33 T 14-09-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AY555_RS00860 db9dd9fc940b715c5bf03e8bf31f99be 218 PRINTS PR00094 Adenylate kinase signature 35 49 9.3E-33 T 14-09-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AY555_RS00860 db9dd9fc940b715c5bf03e8bf31f99be 218 PRINTS PR00094 Adenylate kinase signature 7 20 9.3E-33 T 14-09-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AY555_RS00860 db9dd9fc940b715c5bf03e8bf31f99be 218 PRINTS PR00094 Adenylate kinase signature 164 179 9.3E-33 T 14-09-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AY555_RS00860 db9dd9fc940b715c5bf03e8bf31f99be 218 PRINTS PR00094 Adenylate kinase signature 181 195 9.3E-33 T 14-09-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AY555_RS00860 db9dd9fc940b715c5bf03e8bf31f99be 218 ProSitePatterns PS00113 Adenylate kinase signature. 84 95 - T 14-09-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AY555_RS00860 db9dd9fc940b715c5bf03e8bf31f99be 218 Hamap MF_00235 Adenylate kinase [adk]. 4 217 47.248 T 14-09-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AY555_RS00860 db9dd9fc940b715c5bf03e8bf31f99be 218 Gene3D G3DSA:3.40.50.300 3 214 3.9E-72 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS00860 db9dd9fc940b715c5bf03e8bf31f99be 218 Pfam PF00406 Adenylate kinase 8 193 5.9E-56 T 14-09-2016 AY555_RS00860 db9dd9fc940b715c5bf03e8bf31f99be 218 Pfam PF05191 Adenylate kinase, active site lid 130 166 2.3E-10 T 14-09-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AY555_RS00860 db9dd9fc940b715c5bf03e8bf31f99be 218 SUPERFAMILY SSF52540 5 216 3.38E-39 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS00860 db9dd9fc940b715c5bf03e8bf31f99be 218 PANTHER PTHR23359 3 216 1.0E-88 T 14-09-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AY555_RS00860 db9dd9fc940b715c5bf03e8bf31f99be 218 TIGRFAM TIGR01351 adk: adenylate kinase 5 215 5.4E-75 T 14-09-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AY555_RS04040 a6630f1156278caeafad2c7c27a81761 252 PANTHER PTHR23344:SF20 9 246 1.0E-63 T 14-09-2016 AY555_RS04040 a6630f1156278caeafad2c7c27a81761 252 Gene3D G3DSA:3.20.20.190 9 245 6.2E-64 T 14-09-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AY555_RS04040 a6630f1156278caeafad2c7c27a81761 252 PANTHER PTHR23344 9 246 1.0E-63 T 14-09-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 AY555_RS04040 a6630f1156278caeafad2c7c27a81761 252 SUPERFAMILY SSF51695 9 245 6.54E-66 T 14-09-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AY555_RS04040 a6630f1156278caeafad2c7c27a81761 252 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 14 241 2.6E-35 T 14-09-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AY555_RS02050 889cab77a40a149d5238e9eaf8cf9111 712 PANTHER PTHR33121 399 711 6.8E-59 T 14-09-2016 AY555_RS02050 889cab77a40a149d5238e9eaf8cf9111 712 Pfam PF00563 EAL domain 444 679 1.3E-57 T 14-09-2016 IPR001633 EAL domain AY555_RS02050 889cab77a40a149d5238e9eaf8cf9111 712 PANTHER PTHR33121:SF13 399 711 6.8E-59 T 14-09-2016 AY555_RS02050 889cab77a40a149d5238e9eaf8cf9111 712 SMART SM00267 262 426 4.2E-6 T 14-09-2016 IPR000160 GGDEF domain AY555_RS02050 889cab77a40a149d5238e9eaf8cf9111 712 Gene3D G3DSA:3.20.20.450 442 688 4.7E-68 T 14-09-2016 IPR001633 EAL domain AY555_RS02050 889cab77a40a149d5238e9eaf8cf9111 712 Pfam PF00990 Diguanylate cyclase, GGDEF domain 326 420 9.9E-9 T 14-09-2016 IPR000160 GGDEF domain AY555_RS02050 889cab77a40a149d5238e9eaf8cf9111 712 SUPERFAMILY SSF55073 271 428 7.85E-18 T 14-09-2016 IPR029787 Nucleotide cyclase AY555_RS02050 889cab77a40a149d5238e9eaf8cf9111 712 SUPERFAMILY SSF141868 443 691 1.23E-63 T 14-09-2016 IPR001633 EAL domain AY555_RS02050 889cab77a40a149d5238e9eaf8cf9111 712 SMART SM00052 436 684 4.0E-62 T 14-09-2016 IPR001633 EAL domain AY555_RS02050 889cab77a40a149d5238e9eaf8cf9111 712 Gene3D G3DSA:3.30.70.270 271 431 2.8E-19 T 14-09-2016 AY555_RS06915 f5ae6119225a7d81ff13c6fd1be17b8e 238 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 96 185 1.6E-18 T 14-09-2016 AY555_RS06915 f5ae6119225a7d81ff13c6fd1be17b8e 238 SUPERFAMILY SSF55166 22 185 5.89E-25 T 14-09-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain AY555_RS06745 3da713ee2e3aeae67f77e555a3eebeda 307 SUPERFAMILY SSF103481 38 139 2.48E-12 T 14-09-2016 AY555_RS06745 3da713ee2e3aeae67f77e555a3eebeda 307 PANTHER PTHR12715 4 297 3.5E-69 T 14-09-2016 AY555_RS06745 3da713ee2e3aeae67f77e555a3eebeda 307 SUPERFAMILY SSF103481 192 288 1.07E-14 T 14-09-2016 AY555_RS06745 3da713ee2e3aeae67f77e555a3eebeda 307 PANTHER PTHR12715:SF17 4 297 3.5E-69 T 14-09-2016 AY555_RS06745 3da713ee2e3aeae67f77e555a3eebeda 307 Pfam PF00892 EamA-like transporter family 156 288 2.8E-21 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AY555_RS06745 3da713ee2e3aeae67f77e555a3eebeda 307 Pfam PF00892 EamA-like transporter family 8 138 4.9E-20 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AY555_RS05435 d7fe131bbabdc838771931197534e7c9 293 Gene3D G3DSA:3.40.192.10 10 143 3.2E-48 T 14-09-2016 AY555_RS05435 d7fe131bbabdc838771931197534e7c9 293 Hamap MF_01576 Bifunctional protein FolD [folD]. 6 290 37.828 T 14-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AY555_RS05435 d7fe131bbabdc838771931197534e7c9 293 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 158 178 7.6E-83 T 14-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AY555_RS05435 d7fe131bbabdc838771931197534e7c9 293 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 207 236 7.6E-83 T 14-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AY555_RS05435 d7fe131bbabdc838771931197534e7c9 293 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 78 105 7.6E-83 T 14-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AY555_RS05435 d7fe131bbabdc838771931197534e7c9 293 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 246 262 7.6E-83 T 14-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AY555_RS05435 d7fe131bbabdc838771931197534e7c9 293 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 37 59 7.6E-83 T 14-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AY555_RS05435 d7fe131bbabdc838771931197534e7c9 293 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 113 134 7.6E-83 T 14-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AY555_RS05435 d7fe131bbabdc838771931197534e7c9 293 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 263 281 7.6E-83 T 14-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AY555_RS05435 d7fe131bbabdc838771931197534e7c9 293 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 267 275 - T 14-09-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AY555_RS05435 d7fe131bbabdc838771931197534e7c9 293 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 127 288 5.6E-67 T 14-09-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AY555_RS05435 d7fe131bbabdc838771931197534e7c9 293 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 79 104 - T 14-09-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AY555_RS05435 d7fe131bbabdc838771931197534e7c9 293 SUPERFAMILY SSF53223 6 125 3.93E-38 T 14-09-2016 AY555_RS05435 d7fe131bbabdc838771931197534e7c9 293 PANTHER PTHR10025 1 289 6.1E-149 T 14-09-2016 AY555_RS05435 d7fe131bbabdc838771931197534e7c9 293 Gene3D G3DSA:3.40.50.720 144 271 1.1E-52 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS05435 d7fe131bbabdc838771931197534e7c9 293 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 8 124 1.2E-37 T 14-09-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AY555_RS05435 d7fe131bbabdc838771931197534e7c9 293 SUPERFAMILY SSF51735 126 286 4.3E-48 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS00930 ec5ff784ab229f4bba802d01e9c00785 139 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 14-09-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00930 ec5ff784ab229f4bba802d01e9c00785 139 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 14-09-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00930 ec5ff784ab229f4bba802d01e9c00785 139 SUPERFAMILY SSF54686 1 134 1.02E-56 T 14-09-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AY555_RS00930 ec5ff784ab229f4bba802d01e9c00785 139 Gene3D G3DSA:3.90.1170.10 24 134 4.0E-53 T 14-09-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AY555_RS00930 ec5ff784ab229f4bba802d01e9c00785 139 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 1.7E-58 T 14-09-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 AY555_RS00930 ec5ff784ab229f4bba802d01e9c00785 139 PRINTS PR00060 Ribosomal protein L16 signature 42 53 1.2E-39 T 14-09-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 AY555_RS00930 ec5ff784ab229f4bba802d01e9c00785 139 PRINTS PR00060 Ribosomal protein L16 signature 88 117 1.2E-39 T 14-09-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 AY555_RS00930 ec5ff784ab229f4bba802d01e9c00785 139 PRINTS PR00060 Ribosomal protein L16 signature 58 87 1.2E-39 T 14-09-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 AY555_RS00930 ec5ff784ab229f4bba802d01e9c00785 139 PRINTS PR00060 Ribosomal protein L16 signature 24 36 1.2E-39 T 14-09-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 AY555_RS00930 ec5ff784ab229f4bba802d01e9c00785 139 PANTHER PTHR12220 1 134 1.7E-72 T 14-09-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 AY555_RS00930 ec5ff784ab229f4bba802d01e9c00785 139 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 1.6E-49 T 14-09-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AY555_RS00930 ec5ff784ab229f4bba802d01e9c00785 139 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 39.315 T 14-09-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 AY555_RS01400 35d9dcce138725d1a84d7576ce790d62 275 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 52 265 7.3E-29 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AY555_RS01400 35d9dcce138725d1a84d7576ce790d62 275 SUPERFAMILY SSF53850 50 265 4.11E-36 T 14-09-2016 AY555_RS01400 35d9dcce138725d1a84d7576ce790d62 275 Gene3D G3DSA:3.40.190.10 240 264 5.2E-18 T 14-09-2016 AY555_RS01400 35d9dcce138725d1a84d7576ce790d62 275 Gene3D G3DSA:3.40.190.10 50 134 5.2E-18 T 14-09-2016 AY555_RS04835 20147413ffd83f556419f1ba0dff8aa0 473 Hamap MF_01347 ATP synthase subunit beta [atpB]. 4 469 57.62 T 14-09-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AY555_RS04835 20147413ffd83f556419f1ba0dff8aa0 473 PANTHER PTHR15184:SF44 2 471 0.0 T 14-09-2016 AY555_RS04835 20147413ffd83f556419f1ba0dff8aa0 473 SUPERFAMILY SSF52540 79 356 1.49E-88 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04835 20147413ffd83f556419f1ba0dff8aa0 473 Gene3D G3DSA:2.40.10.170 2 76 1.9E-32 T 14-09-2016 AY555_RS04835 20147413ffd83f556419f1ba0dff8aa0 473 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 342 351 - T 14-09-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AY555_RS04835 20147413ffd83f556419f1ba0dff8aa0 473 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 9 75 5.2E-21 T 14-09-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AY555_RS04835 20147413ffd83f556419f1ba0dff8aa0 473 PANTHER PTHR15184 2 471 0.0 T 14-09-2016 AY555_RS04835 20147413ffd83f556419f1ba0dff8aa0 473 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 6 469 1.1E-252 T 14-09-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AY555_RS04835 20147413ffd83f556419f1ba0dff8aa0 473 Gene3D G3DSA:1.10.1140.10 354 470 5.2E-56 T 14-09-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AY555_RS04835 20147413ffd83f556419f1ba0dff8aa0 473 SUPERFAMILY SSF47917 354 469 1.6E-53 T 14-09-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AY555_RS04835 20147413ffd83f556419f1ba0dff8aa0 473 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 132 351 1.5E-61 T 14-09-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AY555_RS04835 20147413ffd83f556419f1ba0dff8aa0 473 PIRSF PIRSF039072 1 473 5.2E-284 T 14-09-2016 AY555_RS04835 20147413ffd83f556419f1ba0dff8aa0 473 Gene3D G3DSA:3.40.50.300 78 352 3.1E-111 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04835 20147413ffd83f556419f1ba0dff8aa0 473 SMART SM00382 144 414 1.9E-5 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS04835 20147413ffd83f556419f1ba0dff8aa0 473 SUPERFAMILY SSF50615 3 76 3.66E-24 T 14-09-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AY555_RS00980 afd6dff791cf8efbd73761d837890d09 692 Gene3D G3DSA:3.30.230.10 483 598 7.2E-49 T 14-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AY555_RS00980 afd6dff791cf8efbd73761d837890d09 692 Hamap MF_00054_B Elongation factor G [fusA]. 6 690 111.002 T 14-09-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 AY555_RS00980 afd6dff791cf8efbd73761d837890d09 692 PANTHER PTHR23115 2 177 0.0 T 14-09-2016 AY555_RS00980 afd6dff791cf8efbd73761d837890d09 692 PANTHER PTHR23115 302 690 0.0 T 14-09-2016 AY555_RS00980 afd6dff791cf8efbd73761d837890d09 692 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 180 2.3E-33 T 14-09-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AY555_RS00980 afd6dff791cf8efbd73761d837890d09 692 SUPERFAMILY SSF54211 478 598 2.5E-43 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AY555_RS00980 afd6dff791cf8efbd73761d837890d09 692 Gene3D G3DSA:3.30.70.240 599 684 1.2E-31 T 14-09-2016 IPR000640 Translation elongation factor EFG, V domain AY555_RS00980 afd6dff791cf8efbd73761d837890d09 692 Gene3D G3DSA:3.30.70.870 405 479 8.5E-38 T 14-09-2016 AY555_RS00980 afd6dff791cf8efbd73761d837890d09 692 Gene3D G3DSA:2.40.30.10 305 404 7.1E-38 T 14-09-2016 AY555_RS00980 afd6dff791cf8efbd73761d837890d09 692 Pfam PF00679 Elongation factor G C-terminus 599 685 5.9E-29 T 14-09-2016 IPR000640 Translation elongation factor EFG, V domain AY555_RS00980 afd6dff791cf8efbd73761d837890d09 692 Pfam PF00009 Elongation factor Tu GTP binding domain 9 280 1.3E-71 T 14-09-2016 AY555_RS00980 afd6dff791cf8efbd73761d837890d09 692 Gene3D G3DSA:3.40.50.300 6 286 1.7E-105 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS00980 afd6dff791cf8efbd73761d837890d09 692 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-09-2016 IPR031157 Tr-type G domain, conserved site AY555_RS00980 afd6dff791cf8efbd73761d837890d09 692 Pfam PF03144 Elongation factor Tu domain 2 323 390 6.8E-16 T 14-09-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 AY555_RS00980 afd6dff791cf8efbd73761d837890d09 692 PRINTS PR00315 GTP-binding elongation factor signature 78 88 6.4E-16 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AY555_RS00980 afd6dff791cf8efbd73761d837890d09 692 PRINTS PR00315 GTP-binding elongation factor signature 94 105 6.4E-16 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AY555_RS00980 afd6dff791cf8efbd73761d837890d09 692 PRINTS PR00315 GTP-binding elongation factor signature 12 25 6.4E-16 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AY555_RS00980 afd6dff791cf8efbd73761d837890d09 692 PRINTS PR00315 GTP-binding elongation factor signature 130 139 6.4E-16 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AY555_RS00980 afd6dff791cf8efbd73761d837890d09 692 PRINTS PR00315 GTP-binding elongation factor signature 58 66 6.4E-16 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AY555_RS00980 afd6dff791cf8efbd73761d837890d09 692 PANTHER PTHR23115:SF66 254 282 0.0 T 14-09-2016 AY555_RS00980 afd6dff791cf8efbd73761d837890d09 692 PANTHER PTHR23115:SF66 2 177 0.0 T 14-09-2016 AY555_RS00980 afd6dff791cf8efbd73761d837890d09 692 SUPERFAMILY SSF54980 599 687 1.44E-27 T 14-09-2016 IPR009022 Elongation factor G, III-V domain AY555_RS00980 afd6dff791cf8efbd73761d837890d09 692 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 689 0.0 T 14-09-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 AY555_RS00980 afd6dff791cf8efbd73761d837890d09 692 PANTHER PTHR23115 254 282 0.0 T 14-09-2016 AY555_RS00980 afd6dff791cf8efbd73761d837890d09 692 SUPERFAMILY SSF52540 6 280 2.47E-111 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS00980 afd6dff791cf8efbd73761d837890d09 692 SMART SM00889 479 597 7.9E-67 T 14-09-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AY555_RS00980 afd6dff791cf8efbd73761d837890d09 692 Pfam PF14492 Elongation Factor G, domain II 403 476 1.1E-33 T 14-09-2016 IPR009022 Elongation factor G, III-V domain AY555_RS00980 afd6dff791cf8efbd73761d837890d09 692 SMART SM00838 599 686 1.8E-52 T 14-09-2016 IPR000640 Translation elongation factor EFG, V domain AY555_RS00980 afd6dff791cf8efbd73761d837890d09 692 Pfam PF03764 Elongation factor G, domain IV 478 596 5.0E-45 T 14-09-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AY555_RS00980 afd6dff791cf8efbd73761d837890d09 692 SUPERFAMILY SSF50447 249 274 4.48E-35 T 14-09-2016 IPR009000 Translation protein, beta-barrel domain AY555_RS00980 afd6dff791cf8efbd73761d837890d09 692 SUPERFAMILY SSF50447 304 401 4.48E-35 T 14-09-2016 IPR009000 Translation protein, beta-barrel domain AY555_RS00980 afd6dff791cf8efbd73761d837890d09 692 SUPERFAMILY SSF54980 401 479 2.55E-24 T 14-09-2016 IPR009022 Elongation factor G, III-V domain AY555_RS00980 afd6dff791cf8efbd73761d837890d09 692 PANTHER PTHR23115:SF66 302 690 0.0 T 14-09-2016 AY555_RS05710 d7c802bb062ae8298c9270fc851b982a 536 PANTHER PTHR30389 1 536 0.0 T 14-09-2016 AY555_RS05710 d7c802bb062ae8298c9270fc851b982a 536 Gene3D G3DSA:3.20.130.10 349 535 6.9E-72 T 14-09-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AY555_RS05710 d7c802bb062ae8298c9270fc851b982a 536 SUPERFAMILY SSF117457 359 533 1.31E-60 T 14-09-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AY555_RS05710 d7c802bb062ae8298c9270fc851b982a 536 Pfam PF05683 Fumarase C-terminus 330 535 1.7E-91 T 14-09-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AY555_RS05710 d7c802bb062ae8298c9270fc851b982a 536 PANTHER PTHR30389:SF0 1 536 0.0 T 14-09-2016 AY555_RS05710 d7c802bb062ae8298c9270fc851b982a 536 PIRSF PIRSF001394 28 536 8.1E-217 T 14-09-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 AY555_RS05710 d7c802bb062ae8298c9270fc851b982a 536 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 73 322 6.4E-31 T 14-09-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AY555_RS05710 d7c802bb062ae8298c9270fc851b982a 536 Pfam PF05681 Fumarate hydratase (Fumerase) 48 322 1.4E-85 T 14-09-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AY555_RS05710 d7c802bb062ae8298c9270fc851b982a 536 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 372 535 3.3E-56 T 14-09-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AY555_RS05710 d7c802bb062ae8298c9270fc851b982a 536 ProSitePatterns PS00163 Fumarate lyases signature. 454 463 - T 14-09-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 AY555_RS00055 4541a8191b9544b99d293ac399110a0d 88 PANTHER PTHR34040:SF2 1 87 1.7E-24 T 14-09-2016 AY555_RS00055 4541a8191b9544b99d293ac399110a0d 88 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 84 1.9E-28 T 14-09-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 AY555_RS00055 4541a8191b9544b99d293ac399110a0d 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 4.3E-17 T 14-09-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AY555_RS00055 4541a8191b9544b99d293ac399110a0d 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 4.3E-17 T 14-09-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AY555_RS00055 4541a8191b9544b99d293ac399110a0d 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 4.3E-17 T 14-09-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AY555_RS00055 4541a8191b9544b99d293ac399110a0d 88 PANTHER PTHR34040 1 87 1.7E-24 T 14-09-2016 AY555_RS00055 4541a8191b9544b99d293ac399110a0d 88 PIRSF PIRSF004669 1 88 1.2E-29 T 14-09-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AY555_RS00055 4541a8191b9544b99d293ac399110a0d 88 Pfam PF01313 Bacterial export proteins, family 3 5 78 5.1E-27 T 14-09-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AY555_RS04660 db0595dce53cefff2ce9d561b37ce0b8 244 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 6 241 3.0E-66 T 14-09-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AY555_RS04660 db0595dce53cefff2ce9d561b37ce0b8 244 Hamap MF_01393 ATP synthase subunit a [atpB]. 6 244 16.442 T 14-09-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AY555_RS04660 db0595dce53cefff2ce9d561b37ce0b8 244 Pfam PF00119 ATP synthase A chain 35 237 4.1E-55 T 14-09-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AY555_RS04660 db0595dce53cefff2ce9d561b37ce0b8 244 PANTHER PTHR11410 4 244 2.0E-81 T 14-09-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AY555_RS04660 db0595dce53cefff2ce9d561b37ce0b8 244 PANTHER PTHR11410:SF6 4 244 2.0E-81 T 14-09-2016 AY555_RS04660 db0595dce53cefff2ce9d561b37ce0b8 244 PRINTS PR00123 ATP synthase A subunit signature 89 105 3.8E-30 T 14-09-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AY555_RS04660 db0595dce53cefff2ce9d561b37ce0b8 244 PRINTS PR00123 ATP synthase A subunit signature 170 192 3.8E-30 T 14-09-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AY555_RS04660 db0595dce53cefff2ce9d561b37ce0b8 244 PRINTS PR00123 ATP synthase A subunit signature 224 239 3.8E-30 T 14-09-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AY555_RS04660 db0595dce53cefff2ce9d561b37ce0b8 244 PRINTS PR00123 ATP synthase A subunit signature 150 165 3.8E-30 T 14-09-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AY555_RS04660 db0595dce53cefff2ce9d561b37ce0b8 244 Gene3D G3DSA:1.20.120.220 82 244 2.2E-47 T 14-09-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AY555_RS04660 db0595dce53cefff2ce9d561b37ce0b8 244 ProSitePatterns PS00449 ATP synthase a subunit signature. 173 182 - T 14-09-2016 IPR023011 ATPase, F0 complex, subunit A, active site AY555_RS04660 db0595dce53cefff2ce9d561b37ce0b8 244 SUPERFAMILY SSF81336 82 238 1.7E-44 T 14-09-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 SUPERFAMILY SSF51120 1054 1161 5.1E-9 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 SUPERFAMILY SSF51120 881 1023 7.85E-21 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 Pfam PF08548 Peptidase M10 serralysin C terminal 250 340 1.4E-8 T 14-09-2016 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 Pfam PF08548 Peptidase M10 serralysin C terminal 664 819 8.0E-7 T 14-09-2016 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 Pfam PF08548 Peptidase M10 serralysin C terminal 1518 1654 1.8E-7 T 14-09-2016 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 Pfam PF08548 Peptidase M10 serralysin C terminal 353 544 4.6E-6 T 14-09-2016 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 PRINTS PR00313 NodO calcium binding signature 423 431 2.6E-8 T 14-09-2016 AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 PRINTS PR00313 NodO calcium binding signature 441 450 2.6E-8 T 14-09-2016 AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 PRINTS PR00313 NodO calcium binding signature 396 404 2.6E-8 T 14-09-2016 AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 PRINTS PR00313 NodO calcium binding signature 329 340 2.6E-8 T 14-09-2016 AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 67 87 4.4E-7 T 14-09-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 414 435 4.4E-7 T 14-09-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 Gene3D G3DSA:2.150.10.10 1055 1160 3.7E-30 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 Gene3D G3DSA:2.150.10.10 241 375 2.6E-13 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 Gene3D G3DSA:2.150.10.10 1524 1613 2.1E-25 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 Gene3D G3DSA:2.150.10.10 1371 1408 2.1E-25 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 Gene3D G3DSA:2.150.10.10 882 1017 3.7E-30 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 Gene3D G3DSA:2.150.10.10 677 769 6.8E-19 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 Gene3D G3DSA:2.150.10.10 391 499 1.4E-20 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 Gene3D G3DSA:2.150.10.10 1305 1332 2.1E-25 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 Gene3D G3DSA:2.150.10.10 1444 1486 2.1E-25 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 Gene3D G3DSA:2.150.10.10 604 646 3.6E-6 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 989 1007 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 SUPERFAMILY SSF51120 380 541 2.62E-22 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 Gene3D G3DSA:3.40.390.10 18 230 3.7E-33 T 14-09-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 SUPERFAMILY SSF51120 604 826 3.56E-27 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 Pfam PF00413 Matrixin 72 177 7.7E-10 T 14-09-2016 IPR001818 Peptidase M10, metallopeptidase GO:0004222|GO:0006508|GO:0008270|GO:0031012 AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 SUPERFAMILY SSF51120 1225 1342 6.67E-11 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 SUPERFAMILY SSF51120 1368 1520 2.35E-21 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 337 355 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 SUPERFAMILY SSF55486 20 227 2.27E-34 T 14-09-2016 AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 998 1016 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 428 446 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 SMART SM00235 27 229 1.3E-9 T 14-09-2016 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 SUPERFAMILY SSF51120 1512 1654 2.49E-13 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 975 991 0.03 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1471 1486 4.7 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 624 639 19.0 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1371 1387 34.0 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 956 973 0.85 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 431 448 0.38 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 313 330 0.14 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 697 713 0.24 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 992 1009 0.039 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 332 348 1.0 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1316 1331 0.18 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1452 1469 0.06 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 902 916 54.0 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1544 1560 8.2 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 413 430 0.32 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 396 412 0.13 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1525 1541 1.7 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 714 731 0.74 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 883 898 15.0 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 679 695 63.0 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1389 1405 0.67 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 711 729 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05155 496f025efc5b51ec5483d8dace7fed9a 1660 SUPERFAMILY SSF51120 236 368 9.03E-16 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS06715 4a256f5b18eaeb61407aca3e587e6339 225 Pfam PF00308 Bacterial dnaA protein 99 186 2.0E-6 T 14-09-2016 IPR013317 Chromosomal replication initiator protein DnaA AY555_RS06715 4a256f5b18eaeb61407aca3e587e6339 225 Gene3D G3DSA:1.10.8.60 153 217 2.1E-16 T 14-09-2016 AY555_RS06715 4a256f5b18eaeb61407aca3e587e6339 225 Gene3D G3DSA:3.40.50.300 1 145 3.1E-25 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS06715 4a256f5b18eaeb61407aca3e587e6339 225 SUPERFAMILY SSF52540 11 197 7.32E-19 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS06715 4a256f5b18eaeb61407aca3e587e6339 225 PANTHER PTHR30050:SF5 1 218 4.0E-34 T 14-09-2016 AY555_RS06715 4a256f5b18eaeb61407aca3e587e6339 225 PANTHER PTHR30050 1 218 4.0E-34 T 14-09-2016 AY555_RS02340 41ae0f4ea56e0235242b09ab31db8e72 613 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 117 522 2.9E-71 T 14-09-2016 IPR000914 Solute-binding protein family 5 domain AY555_RS02340 41ae0f4ea56e0235242b09ab31db8e72 613 SUPERFAMILY SSF53850 60 598 4.34E-113 T 14-09-2016 AY555_RS02340 41ae0f4ea56e0235242b09ab31db8e72 613 Gene3D G3DSA:3.90.76.10 76 227 1.6E-29 T 14-09-2016 AY555_RS02340 41ae0f4ea56e0235242b09ab31db8e72 613 PANTHER PTHR30290 1 372 3.0E-175 T 14-09-2016 AY555_RS02340 41ae0f4ea56e0235242b09ab31db8e72 613 PANTHER PTHR30290 397 593 3.0E-175 T 14-09-2016 AY555_RS02340 41ae0f4ea56e0235242b09ab31db8e72 613 Gene3D G3DSA:3.10.105.10 340 578 8.2E-40 T 14-09-2016 AY555_RS02340 41ae0f4ea56e0235242b09ab31db8e72 613 PIRSF PIRSF002741 7 610 7.1E-91 T 14-09-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AY555_RS02340 41ae0f4ea56e0235242b09ab31db8e72 613 Gene3D G3DSA:3.40.190.10 228 339 7.2E-25 T 14-09-2016 AY555_RS02340 41ae0f4ea56e0235242b09ab31db8e72 613 PANTHER PTHR30290:SF2 1 372 3.0E-175 T 14-09-2016 AY555_RS02340 41ae0f4ea56e0235242b09ab31db8e72 613 PANTHER PTHR30290:SF2 397 593 3.0E-175 T 14-09-2016 AY555_RS04670 c5b0f40224940a0ce90bed7148d774ac 163 Hamap MF_01398 ATP synthase subunit b [atpF]. 4 162 9.266 T 14-09-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AY555_RS04670 c5b0f40224940a0ce90bed7148d774ac 163 Pfam PF00430 ATP synthase B/B' CF(0) 13 141 2.4E-23 T 14-09-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AY555_RS08555 8534f55422a6a26bf31700cfff0ae898 412 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 331 406 6.5E-6 T 14-09-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AY555_RS08555 8534f55422a6a26bf31700cfff0ae898 412 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 240 305 8.3E-6 T 14-09-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AY555_RS08555 8534f55422a6a26bf31700cfff0ae898 412 Gene3D G3DSA:3.40.50.150 226 411 4.1E-34 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS08555 8534f55422a6a26bf31700cfff0ae898 412 PANTHER PTHR11061 3 412 2.9E-65 T 14-09-2016 AY555_RS08555 8534f55422a6a26bf31700cfff0ae898 412 SUPERFAMILY SSF50249 3 42 4.97E-8 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS08555 8534f55422a6a26bf31700cfff0ae898 412 PANTHER PTHR11061:SF30 3 412 2.9E-65 T 14-09-2016 AY555_RS08555 8534f55422a6a26bf31700cfff0ae898 412 SUPERFAMILY SSF53335 55 411 7.64E-45 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS08555 8534f55422a6a26bf31700cfff0ae898 412 Gene3D G3DSA:2.40.50.140 5 67 1.2E-16 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS01345 dc906b61e0382b62a7245f98befe85e1 183 SUPERFAMILY SSF50022 37 180 3.93E-41 T 14-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AY555_RS01345 dc906b61e0382b62a7245f98befe85e1 183 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 11 47 2.8E-17 T 14-09-2016 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 AY555_RS01345 dc906b61e0382b62a7245f98befe85e1 183 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 16 183 1.5E-69 T 14-09-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 AY555_RS01345 dc906b61e0382b62a7245f98befe85e1 183 PANTHER PTHR10134:SF1 15 183 1.1E-83 T 14-09-2016 AY555_RS01345 dc906b61e0382b62a7245f98befe85e1 183 PANTHER PTHR10134 15 183 1.1E-83 T 14-09-2016 IPR014349 Rieske iron-sulphur protein GO:0016679|GO:0055114 AY555_RS01345 dc906b61e0382b62a7245f98befe85e1 183 Gene3D G3DSA:1.20.5.510 12 47 5.0E-16 T 14-09-2016 AY555_RS01345 dc906b61e0382b62a7245f98befe85e1 183 Pfam PF00355 Rieske [2Fe-2S] domain 109 168 2.3E-11 T 14-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AY555_RS01345 dc906b61e0382b62a7245f98befe85e1 183 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 16 40 1.4E-4 T 14-09-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AY555_RS01345 dc906b61e0382b62a7245f98befe85e1 183 PRINTS PR00162 Rieske 2Fe-2S subunit signature 143 155 6.4E-18 T 14-09-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AY555_RS01345 dc906b61e0382b62a7245f98befe85e1 183 PRINTS PR00162 Rieske 2Fe-2S subunit signature 155 167 6.4E-18 T 14-09-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AY555_RS01345 dc906b61e0382b62a7245f98befe85e1 183 PRINTS PR00162 Rieske 2Fe-2S subunit signature 116 127 6.4E-18 T 14-09-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AY555_RS01345 dc906b61e0382b62a7245f98befe85e1 183 Gene3D G3DSA:2.102.10.10 54 181 7.3E-39 T 14-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AY555_RS09125 942954a8b6c2c8742ab865b609fb8648 95 PANTHER PTHR15004:SF0 1 95 3.3E-27 T 14-09-2016 AY555_RS09125 942954a8b6c2c8742ab865b609fb8648 95 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 90 6.1E-18 T 14-09-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 AY555_RS09125 942954a8b6c2c8742ab865b609fb8648 95 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 95 1.2E-22 T 14-09-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 AY555_RS09125 942954a8b6c2c8742ab865b609fb8648 95 PANTHER PTHR15004 1 95 3.3E-27 T 14-09-2016 AY555_RS09125 942954a8b6c2c8742ab865b609fb8648 95 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 21.2 T 14-09-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 AY555_RS09125 942954a8b6c2c8742ab865b609fb8648 95 SUPERFAMILY SSF141000 2 93 1.16E-27 T 14-09-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 AY555_RS04990 5016a0fd1ac2bb7feff151b858cce98d 707 Gene3D G3DSA:3.40.50.2000 416 566 9.0E-13 T 14-09-2016 AY555_RS04990 5016a0fd1ac2bb7feff151b858cce98d 707 SUPERFAMILY SSF53448 3 203 1.84E-24 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AY555_RS04990 5016a0fd1ac2bb7feff151b858cce98d 707 SUPERFAMILY SSF53756 416 574 1.46E-8 T 14-09-2016 AY555_RS04990 5016a0fd1ac2bb7feff151b858cce98d 707 Pfam PF02348 Cytidylyltransferase 5 174 7.2E-22 T 14-09-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 AY555_RS04990 5016a0fd1ac2bb7feff151b858cce98d 707 TIGRFAM TIGR03590 PseG: UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase 257 523 6.4E-52 T 14-09-2016 IPR020023 UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase AY555_RS04990 5016a0fd1ac2bb7feff151b858cce98d 707 Gene3D G3DSA:3.90.550.10 3 207 3.4E-25 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AY555_RS04990 5016a0fd1ac2bb7feff151b858cce98d 707 PANTHER PTHR21485:SF16 1 123 6.6E-19 T 14-09-2016 AY555_RS04990 5016a0fd1ac2bb7feff151b858cce98d 707 PANTHER PTHR21485 1 123 6.6E-19 T 14-09-2016 AY555_RS03300 d5f19ac383e5574e3c5876540a9eb88f 68 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 11 64 27.84 T 14-09-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 AY555_RS03300 d5f19ac383e5574e3c5876540a9eb88f 68 Pfam PF03966 Trm112p-like protein 12 51 2.7E-10 T 14-09-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 AY555_RS03300 d5f19ac383e5574e3c5876540a9eb88f 68 Gene3D G3DSA:2.20.25.10 18 64 3.8E-26 T 14-09-2016 AY555_RS03300 d5f19ac383e5574e3c5876540a9eb88f 68 SUPERFAMILY SSF158997 11 64 2.35E-21 T 14-09-2016 AY555_RS03300 d5f19ac383e5574e3c5876540a9eb88f 68 PANTHER PTHR33505 12 64 4.5E-28 T 14-09-2016 AY555_RS06820 327de63cd80f9a48deb9ad00122d7904 247 PANTHER PTHR10108 2 243 7.5E-82 T 14-09-2016 AY555_RS06820 327de63cd80f9a48deb9ad00122d7904 247 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 12 240 9.5E-88 T 14-09-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 AY555_RS06820 327de63cd80f9a48deb9ad00122d7904 247 Gene3D G3DSA:3.40.50.150 23 228 1.5E-41 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS06820 327de63cd80f9a48deb9ad00122d7904 247 PANTHER PTHR10108:SF902 2 243 7.5E-82 T 14-09-2016 AY555_RS06820 327de63cd80f9a48deb9ad00122d7904 247 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 10 246 40.138 T 14-09-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 AY555_RS06820 327de63cd80f9a48deb9ad00122d7904 247 Pfam PF08241 Methyltransferase domain 68 162 5.3E-20 T 14-09-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AY555_RS06820 327de63cd80f9a48deb9ad00122d7904 247 SUPERFAMILY SSF53335 7 226 3.98E-43 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS01885 163e788176a47183c6adc453bb1e9945 131 Gene3D G3DSA:1.10.260.40 24 85 5.7E-18 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AY555_RS01885 163e788176a47183c6adc453bb1e9945 131 SUPERFAMILY SSF47413 16 89 1.56E-23 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AY555_RS01885 163e788176a47183c6adc453bb1e9945 131 PANTHER PTHR10245:SF38 21 85 9.8E-21 T 14-09-2016 AY555_RS01885 163e788176a47183c6adc453bb1e9945 131 Pfam PF01381 Helix-turn-helix 28 82 8.4E-14 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AY555_RS01885 163e788176a47183c6adc453bb1e9945 131 PANTHER PTHR10245 21 85 9.8E-21 T 14-09-2016 AY555_RS01885 163e788176a47183c6adc453bb1e9945 131 SMART SM00530 27 82 3.4E-13 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AY555_RS06105 19edff34286f050b3223b5a12193717b 309 Pfam PF07478 D-ala D-ala ligase C-terminus 139 302 1.3E-40 T 14-09-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AY555_RS06105 19edff34286f050b3223b5a12193717b 309 Gene3D G3DSA:3.40.50.20 11 95 2.6E-27 T 14-09-2016 IPR016185 Pre-ATP-grasp domain AY555_RS06105 19edff34286f050b3223b5a12193717b 309 Gene3D G3DSA:3.30.1490.20 108 181 8.9E-12 T 14-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AY555_RS06105 19edff34286f050b3223b5a12193717b 309 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 249 276 - T 14-09-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AY555_RS06105 19edff34286f050b3223b5a12193717b 309 Gene3D G3DSA:3.30.470.20 182 305 3.3E-47 T 14-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AY555_RS06105 19edff34286f050b3223b5a12193717b 309 Gene3D G3DSA:3.30.470.20 97 107 3.3E-47 T 14-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AY555_RS06105 19edff34286f050b3223b5a12193717b 309 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 11 306 33.451 T 14-09-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AY555_RS06105 19edff34286f050b3223b5a12193717b 309 Pfam PF01820 D-ala D-ala ligase N-terminus 12 95 3.2E-21 T 14-09-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AY555_RS06105 19edff34286f050b3223b5a12193717b 309 PANTHER PTHR23132 1 306 2.0E-75 T 14-09-2016 AY555_RS06105 19edff34286f050b3223b5a12193717b 309 SUPERFAMILY SSF56059 107 304 2.86E-47 T 14-09-2016 AY555_RS06105 19edff34286f050b3223b5a12193717b 309 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 74 85 - T 14-09-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AY555_RS06105 19edff34286f050b3223b5a12193717b 309 SUPERFAMILY SSF52440 11 107 4.22E-29 T 14-09-2016 IPR016185 Pre-ATP-grasp domain AY555_RS06105 19edff34286f050b3223b5a12193717b 309 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 12 305 1.9E-84 T 14-09-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AY555_RS09150 5349bc8511b6045a585b86e885712fe1 328 PRINTS PR00139 Asparaginase/glutaminase family signature 251 269 1.8E-13 T 14-09-2016 IPR006034 Asparaginase/glutaminase GO:0006520 AY555_RS09150 5349bc8511b6045a585b86e885712fe1 328 PRINTS PR00139 Asparaginase/glutaminase family signature 78 96 1.8E-13 T 14-09-2016 IPR006034 Asparaginase/glutaminase GO:0006520 AY555_RS09150 5349bc8511b6045a585b86e885712fe1 328 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 1.8E-13 T 14-09-2016 IPR006034 Asparaginase/glutaminase GO:0006520 AY555_RS09150 5349bc8511b6045a585b86e885712fe1 328 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 6 14 - T 14-09-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 AY555_RS09150 5349bc8511b6045a585b86e885712fe1 328 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 79 89 - T 14-09-2016 IPR027475 Asparaginase/glutaminase, active site 2 AY555_RS09150 5349bc8511b6045a585b86e885712fe1 328 Gene3D G3DSA:3.40.50.40 201 325 1.2E-28 T 14-09-2016 IPR027473 L-asparaginase, C-terminal domain AY555_RS09150 5349bc8511b6045a585b86e885712fe1 328 Pfam PF00710 Asparaginase, N-terminal 4 169 3.7E-43 T 14-09-2016 IPR027474 L-asparaginase, N-terminal AY555_RS09150 5349bc8511b6045a585b86e885712fe1 328 SUPERFAMILY SSF53774 1 326 2.75E-76 T 14-09-2016 IPR006034 Asparaginase/glutaminase GO:0006520 AY555_RS09150 5349bc8511b6045a585b86e885712fe1 328 Gene3D G3DSA:3.40.50.1170 2 169 6.8E-44 T 14-09-2016 IPR027474 L-asparaginase, N-terminal AY555_RS09150 5349bc8511b6045a585b86e885712fe1 328 PANTHER PTHR11707:SF3 1 324 1.8E-51 T 14-09-2016 AY555_RS09150 5349bc8511b6045a585b86e885712fe1 328 SMART SM00870 3 314 7.4E-70 T 14-09-2016 IPR006034 Asparaginase/glutaminase GO:0006520 AY555_RS09150 5349bc8511b6045a585b86e885712fe1 328 PANTHER PTHR11707 1 324 1.8E-51 T 14-09-2016 AY555_RS09150 5349bc8511b6045a585b86e885712fe1 328 PIRSF PIRSF500176 1 323 1.6E-73 T 14-09-2016 AY555_RS09150 5349bc8511b6045a585b86e885712fe1 328 PIRSF PIRSF001220 1 325 1.4E-64 T 14-09-2016 IPR006034 Asparaginase/glutaminase GO:0006520 AY555_RS02475 522b915532f7b402893934d3104ca29d 918 SMART SM00475 2 257 8.1E-120 T 14-09-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 AY555_RS02475 522b915532f7b402893934d3104ca29d 918 Gene3D G3DSA:1.10.150.20 702 807 3.8E-32 T 14-09-2016 AY555_RS02475 522b915532f7b402893934d3104ca29d 918 SMART SM00482 676 882 3.9E-115 T 14-09-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AY555_RS02475 522b915532f7b402893934d3104ca29d 918 PANTHER PTHR10133 294 917 0.0 T 14-09-2016 AY555_RS02475 522b915532f7b402893934d3104ca29d 918 PANTHER PTHR10133 2 277 0.0 T 14-09-2016 AY555_RS02475 522b915532f7b402893934d3104ca29d 918 Gene3D G3DSA:3.30.420.10 307 530 2.2E-75 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AY555_RS02475 522b915532f7b402893934d3104ca29d 918 Gene3D G3DSA:1.10.150.20 181 242 1.2E-25 T 14-09-2016 AY555_RS02475 522b915532f7b402893934d3104ca29d 918 Pfam PF00476 DNA polymerase family A 539 915 1.0E-145 T 14-09-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AY555_RS02475 522b915532f7b402893934d3104ca29d 918 SUPERFAMILY SSF53098 307 505 4.22E-50 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AY555_RS02475 522b915532f7b402893934d3104ca29d 918 SUPERFAMILY SSF56672 512 918 5.23E-144 T 14-09-2016 AY555_RS02475 522b915532f7b402893934d3104ca29d 918 Gene3D G3DSA:3.30.70.370 808 918 1.7E-64 T 14-09-2016 AY555_RS02475 522b915532f7b402893934d3104ca29d 918 Gene3D G3DSA:3.30.70.370 653 701 1.7E-64 T 14-09-2016 AY555_RS02475 522b915532f7b402893934d3104ca29d 918 Gene3D G3DSA:1.20.1060.10 531 652 4.7E-31 T 14-09-2016 AY555_RS02475 522b915532f7b402893934d3104ca29d 918 Pfam PF01612 3'-5' exonuclease 308 504 3.3E-38 T 14-09-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AY555_RS02475 522b915532f7b402893934d3104ca29d 918 SMART SM00279 168 203 1.4E-13 T 14-09-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 AY555_RS02475 522b915532f7b402893934d3104ca29d 918 Gene3D G3DSA:3.40.50.1010 2 180 3.5E-66 T 14-09-2016 IPR029060 PIN domain-like AY555_RS02475 522b915532f7b402893934d3104ca29d 918 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 166 260 1.7E-30 T 14-09-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 AY555_RS02475 522b915532f7b402893934d3104ca29d 918 TIGRFAM TIGR00593 pola: DNA polymerase I 4 917 1.0E-284 T 14-09-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AY555_RS02475 522b915532f7b402893934d3104ca29d 918 PRINTS PR00868 DNA-polymerase family A (pol I) signature 865 878 2.0E-74 T 14-09-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AY555_RS02475 522b915532f7b402893934d3104ca29d 918 PRINTS PR00868 DNA-polymerase family A (pol I) signature 690 713 2.0E-74 T 14-09-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AY555_RS02475 522b915532f7b402893934d3104ca29d 918 PRINTS PR00868 DNA-polymerase family A (pol I) signature 720 733 2.0E-74 T 14-09-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AY555_RS02475 522b915532f7b402893934d3104ca29d 918 PRINTS PR00868 DNA-polymerase family A (pol I) signature 744 769 2.0E-74 T 14-09-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AY555_RS02475 522b915532f7b402893934d3104ca29d 918 PRINTS PR00868 DNA-polymerase family A (pol I) signature 668 683 2.0E-74 T 14-09-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AY555_RS02475 522b915532f7b402893934d3104ca29d 918 PRINTS PR00868 DNA-polymerase family A (pol I) signature 803 814 2.0E-74 T 14-09-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AY555_RS02475 522b915532f7b402893934d3104ca29d 918 PRINTS PR00868 DNA-polymerase family A (pol I) signature 835 851 2.0E-74 T 14-09-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AY555_RS02475 522b915532f7b402893934d3104ca29d 918 PRINTS PR00868 DNA-polymerase family A (pol I) signature 645 667 2.0E-74 T 14-09-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AY555_RS02475 522b915532f7b402893934d3104ca29d 918 PRINTS PR00868 DNA-polymerase family A (pol I) signature 781 792 2.0E-74 T 14-09-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AY555_RS02475 522b915532f7b402893934d3104ca29d 918 ProSitePatterns PS00447 DNA polymerase family A signature. 744 763 - T 14-09-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AY555_RS02475 522b915532f7b402893934d3104ca29d 918 SUPERFAMILY SSF88723 1 155 6.54E-53 T 14-09-2016 IPR029060 PIN domain-like AY555_RS02475 522b915532f7b402893934d3104ca29d 918 PANTHER PTHR10133:SF27 294 917 0.0 T 14-09-2016 AY555_RS02475 522b915532f7b402893934d3104ca29d 918 PANTHER PTHR10133:SF27 2 277 0.0 T 14-09-2016 AY555_RS02475 522b915532f7b402893934d3104ca29d 918 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 3 165 3.9E-53 T 14-09-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 AY555_RS02475 522b915532f7b402893934d3104ca29d 918 SUPERFAMILY SSF47807 166 280 1.64E-29 T 14-09-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 AY555_RS02475 522b915532f7b402893934d3104ca29d 918 SMART SM00474 308 506 1.3E-35 T 14-09-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AY555_RS01055 2e857437b8c22b9a38defe215ccdcec3 281 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 40 274 1.6E-59 T 14-09-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 AY555_RS01055 2e857437b8c22b9a38defe215ccdcec3 281 PANTHER PTHR12029 38 274 2.0E-57 T 14-09-2016 AY555_RS01055 2e857437b8c22b9a38defe215ccdcec3 281 SMART SM00967 39 114 1.4E-13 T 14-09-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 AY555_RS01055 2e857437b8c22b9a38defe215ccdcec3 281 Gene3D G3DSA:3.30.1330.30 39 109 1.9E-9 T 14-09-2016 IPR029064 50S ribosomal protein L30e-like AY555_RS01055 2e857437b8c22b9a38defe215ccdcec3 281 Pfam PF00588 SpoU rRNA Methylase family 131 270 1.5E-36 T 14-09-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AY555_RS01055 2e857437b8c22b9a38defe215ccdcec3 281 SUPERFAMILY SSF75217 126 277 2.42E-44 T 14-09-2016 IPR029028 Alpha/beta knot methyltransferases AY555_RS01055 2e857437b8c22b9a38defe215ccdcec3 281 Gene3D G3DSA:3.40.1280.10 127 276 2.2E-47 T 14-09-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AY555_RS01055 2e857437b8c22b9a38defe215ccdcec3 281 SUPERFAMILY SSF55315 38 110 8.47E-10 T 14-09-2016 IPR029064 50S ribosomal protein L30e-like AY555_RS01055 2e857437b8c22b9a38defe215ccdcec3 281 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 39 112 3.7E-10 T 14-09-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 AY555_RS07755 c70ef459d167cb7b99bde3aca60fecb7 1158 Gene3D G3DSA:1.10.150.280 826 893 8.3E-6 T 14-09-2016 AY555_RS07755 c70ef459d167cb7b99bde3aca60fecb7 1158 PANTHER PTHR32294:SF0 1 1156 0.0 T 14-09-2016 AY555_RS07755 c70ef459d167cb7b99bde3aca60fecb7 1158 PANTHER PTHR32294 1 1156 0.0 T 14-09-2016 AY555_RS07755 c70ef459d167cb7b99bde3aca60fecb7 1158 Pfam PF14579 Helix-hairpin-helix motif 812 906 2.6E-26 T 14-09-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AY555_RS07755 c70ef459d167cb7b99bde3aca60fecb7 1158 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 5 1039 0.0 T 14-09-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AY555_RS07755 c70ef459d167cb7b99bde3aca60fecb7 1158 SUPERFAMILY SSF89550 5 272 1.37E-16 T 14-09-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 AY555_RS07755 c70ef459d167cb7b99bde3aca60fecb7 1158 Gene3D G3DSA:3.20.20.140 5 265 3.6E-24 T 14-09-2016 AY555_RS07755 c70ef459d167cb7b99bde3aca60fecb7 1158 Pfam PF02811 PHP domain 7 183 4.6E-32 T 14-09-2016 IPR004013 PHP domain GO:0003824 AY555_RS07755 c70ef459d167cb7b99bde3aca60fecb7 1158 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 301 739 2.4E-172 T 14-09-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AY555_RS07755 c70ef459d167cb7b99bde3aca60fecb7 1158 SMART SM00481 6 73 5.1E-16 T 14-09-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 AY555_RS08180 6f3f40a92cad9250aa677dfed0c5016e 152 SUPERFAMILY SSF52121 6 150 1.57E-46 T 14-09-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AY555_RS08180 6f3f40a92cad9250aa677dfed0c5016e 152 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 1 150 22.582 T 14-09-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AY555_RS08180 6f3f40a92cad9250aa677dfed0c5016e 152 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 7 145 2.6E-29 T 14-09-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AY555_RS08180 6f3f40a92cad9250aa677dfed0c5016e 152 PANTHER PTHR21058 7 150 4.4E-34 T 14-09-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AY555_RS08180 6f3f40a92cad9250aa677dfed0c5016e 152 Gene3D G3DSA:3.40.50.960 5 148 6.3E-44 T 14-09-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AY555_RS08180 6f3f40a92cad9250aa677dfed0c5016e 152 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 7 147 5.1E-39 T 14-09-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AY555_RS05285 1eae8925ea35ddba7b6887f88185a65b 668 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 471 644 5.9E-28 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AY555_RS05285 1eae8925ea35ddba7b6887f88185a65b 668 SUPERFAMILY SSF58104 409 656 6.54E-55 T 14-09-2016 AY555_RS05285 1eae8925ea35ddba7b6887f88185a65b 668 SUPERFAMILY SSF58104 341 368 6.54E-55 T 14-09-2016 AY555_RS05285 1eae8925ea35ddba7b6887f88185a65b 668 SMART SM00283 403 657 1.1E-32 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AY555_RS05285 1eae8925ea35ddba7b6887f88185a65b 668 PANTHER PTHR32089 279 348 1.4E-118 T 14-09-2016 AY555_RS05285 1eae8925ea35ddba7b6887f88185a65b 668 PANTHER PTHR32089 381 660 1.4E-118 T 14-09-2016 AY555_RS05285 1eae8925ea35ddba7b6887f88185a65b 668 PANTHER PTHR32089:SF40 381 660 1.4E-118 T 14-09-2016 AY555_RS05285 1eae8925ea35ddba7b6887f88185a65b 668 SMART SM01358 37 280 2.0E-5 T 14-09-2016 IPR032255 Helical bimodular sensor domain AY555_RS05285 1eae8925ea35ddba7b6887f88185a65b 668 SMART SM00304 313 366 4.0E-8 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AY555_RS05285 1eae8925ea35ddba7b6887f88185a65b 668 PANTHER PTHR32089:SF40 279 348 1.4E-118 T 14-09-2016 AY555_RS05285 1eae8925ea35ddba7b6887f88185a65b 668 Gene3D G3DSA:1.10.287.950 419 627 5.7E-43 T 14-09-2016 AY555_RS05285 1eae8925ea35ddba7b6887f88185a65b 668 Pfam PF00672 HAMP domain 295 362 1.8E-11 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AY555_RS04710 1ca8152e38b96263c8cab109b132ca4e 240 SUPERFAMILY SSF52540 5 231 4.86E-57 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04710 1ca8152e38b96263c8cab109b132ca4e 240 SMART SM00382 27 219 2.4E-10 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS04710 1ca8152e38b96263c8cab109b132ca4e 240 Pfam PF00005 ABC transporter 18 171 7.8E-29 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AY555_RS04710 1ca8152e38b96263c8cab109b132ca4e 240 PANTHER PTHR24220:SF558 4 239 2.1E-82 T 14-09-2016 AY555_RS04710 1ca8152e38b96263c8cab109b132ca4e 240 PANTHER PTHR24220 4 239 2.1E-82 T 14-09-2016 AY555_RS04710 1ca8152e38b96263c8cab109b132ca4e 240 Gene3D G3DSA:3.40.50.300 4 230 1.0E-62 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS01150 4e11c09ef9f63b1674800a8831bf75d2 309 Gene3D G3DSA:3.40.50.150 120 298 3.9E-29 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS01150 4e11c09ef9f63b1674800a8831bf75d2 309 PANTHER PTHR18895 7 300 3.8E-43 T 14-09-2016 AY555_RS01150 4e11c09ef9f63b1674800a8831bf75d2 309 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 63 302 7.9E-49 T 14-09-2016 AY555_RS01150 4e11c09ef9f63b1674800a8831bf75d2 309 PANTHER PTHR18895:SF3 7 300 3.8E-43 T 14-09-2016 AY555_RS01150 4e11c09ef9f63b1674800a8831bf75d2 309 SUPERFAMILY SSF53335 47 300 1.69E-39 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS09460 d1aae1703986901aef87a0cb3217432d 596 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 46 55 - T 14-09-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 AY555_RS09460 d1aae1703986901aef87a0cb3217432d 596 SUPERFAMILY SSF56425 241 358 1.64E-39 T 14-09-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain AY555_RS09460 d1aae1703986901aef87a0cb3217432d 596 Gene3D G3DSA:3.90.700.10 247 352 9.2E-41 T 14-09-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain AY555_RS09460 d1aae1703986901aef87a0cb3217432d 596 PIRSF PIRSF000171 1 586 4.2E-35 T 14-09-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit AY555_RS09460 d1aae1703986901aef87a0cb3217432d 596 PANTHER PTHR11632 1 591 0.0 T 14-09-2016 AY555_RS09460 d1aae1703986901aef87a0cb3217432d 596 SUPERFAMILY SSF51905 4 263 8.11E-75 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS09460 d1aae1703986901aef87a0cb3217432d 596 SUPERFAMILY SSF51905 362 434 8.11E-75 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS09460 d1aae1703986901aef87a0cb3217432d 596 PANTHER PTHR11632:SF51 1 591 0.0 T 14-09-2016 AY555_RS09460 d1aae1703986901aef87a0cb3217432d 596 Pfam PF02910 Fumarate reductase flavoprotein C-term 463 596 4.4E-42 T 14-09-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 AY555_RS09460 d1aae1703986901aef87a0cb3217432d 596 Gene3D G3DSA:1.20.58.100 436 542 2.5E-36 T 14-09-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 AY555_RS09460 d1aae1703986901aef87a0cb3217432d 596 SUPERFAMILY SSF46977 454 596 2.22E-46 T 14-09-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 AY555_RS09460 d1aae1703986901aef87a0cb3217432d 596 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 12 596 1.0E-238 T 14-09-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 AY555_RS09460 d1aae1703986901aef87a0cb3217432d 596 Gene3D G3DSA:4.10.80.40 543 596 2.0E-29 T 14-09-2016 AY555_RS09460 d1aae1703986901aef87a0cb3217432d 596 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 9 596 2.9E-293 T 14-09-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 AY555_RS09460 d1aae1703986901aef87a0cb3217432d 596 Pfam PF00890 FAD binding domain 12 408 1.3E-116 T 14-09-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain AY555_RS09460 d1aae1703986901aef87a0cb3217432d 596 Gene3D G3DSA:3.50.50.60 354 428 1.8E-119 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS09460 d1aae1703986901aef87a0cb3217432d 596 Gene3D G3DSA:3.50.50.60 4 246 1.8E-119 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS01975 cafa5859349029319f0dbd71202d7efe 89 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 27.543 T 14-09-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS01975 cafa5859349029319f0dbd71202d7efe 89 PANTHER PTHR15893 1 86 5.9E-48 T 14-09-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS01975 cafa5859349029319f0dbd71202d7efe 89 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 85 2.0E-17 T 14-09-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS01975 cafa5859349029319f0dbd71202d7efe 89 SUPERFAMILY SSF110324 2 83 8.37E-34 T 14-09-2016 AY555_RS01975 cafa5859349029319f0dbd71202d7efe 89 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.0E-33 T 14-09-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS01975 cafa5859349029319f0dbd71202d7efe 89 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.0E-33 T 14-09-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS01975 cafa5859349029319f0dbd71202d7efe 89 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.0E-33 T 14-09-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS01975 cafa5859349029319f0dbd71202d7efe 89 Gene3D G3DSA:2.40.50.100 20 84 8.2E-30 T 14-09-2016 AY555_RS01975 cafa5859349029319f0dbd71202d7efe 89 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 14-09-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS01975 cafa5859349029319f0dbd71202d7efe 89 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 2.2E-34 T 14-09-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS01975 cafa5859349029319f0dbd71202d7efe 89 Pfam PF01016 Ribosomal L27 protein 2 81 1.2E-37 T 14-09-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS05850 dca816d4cec435361aaf611e518f4812 183 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 14-09-2016 IPR020070 Ribosomal protein L9, N-terminal AY555_RS05850 dca816d4cec435361aaf611e518f4812 183 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 147 24.262 T 14-09-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS05850 dca816d4cec435361aaf611e518f4812 183 PANTHER PTHR21368 1 163 4.1E-47 T 14-09-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS05850 dca816d4cec435361aaf611e518f4812 183 Gene3D G3DSA:3.40.5.10 1 52 3.8E-23 T 14-09-2016 IPR020070 Ribosomal protein L9, N-terminal AY555_RS05850 dca816d4cec435361aaf611e518f4812 183 SUPERFAMILY SSF55653 58 146 9.16E-24 T 14-09-2016 IPR020069 Ribosomal protein L9, C-terminal AY555_RS05850 dca816d4cec435361aaf611e518f4812 183 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 3.4E-20 T 14-09-2016 IPR020070 Ribosomal protein L9, N-terminal AY555_RS05850 dca816d4cec435361aaf611e518f4812 183 Gene3D G3DSA:3.10.430.100 61 146 7.9E-25 T 14-09-2016 IPR020069 Ribosomal protein L9, C-terminal AY555_RS05850 dca816d4cec435361aaf611e518f4812 183 SUPERFAMILY SSF55658 1 55 1.26E-17 T 14-09-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal AY555_RS05850 dca816d4cec435361aaf611e518f4812 183 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 145 1.3E-36 T 14-09-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS05850 dca816d4cec435361aaf611e518f4812 183 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 145 6.8E-24 T 14-09-2016 IPR020069 Ribosomal protein L9, C-terminal AY555_RS01705 ad3be5c2daca6c11a847fd29c3617129 94 PANTHER PTHR13528 1 91 2.3E-35 T 14-09-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 AY555_RS01705 ad3be5c2daca6c11a847fd29c3617129 94 SUPERFAMILY SSF143800 1 83 1.24E-26 T 14-09-2016 AY555_RS01705 ad3be5c2daca6c11a847fd29c3617129 94 Pfam PF00830 Ribosomal L28 family 3 61 5.9E-25 T 14-09-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 AY555_RS01705 ad3be5c2daca6c11a847fd29c3617129 94 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 68 19.834 T 14-09-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS01705 ad3be5c2daca6c11a847fd29c3617129 94 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 3.6E-22 T 14-09-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS01705 ad3be5c2daca6c11a847fd29c3617129 94 Gene3D G3DSA:2.30.170.40 2 75 1.1E-30 T 14-09-2016 AY555_RS00820 23596417fb96bfe52457cbcdbda9a9d9 339 Gene3D G3DSA:3.10.290.10 14 64 1.3E-5 T 14-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 AY555_RS00820 23596417fb96bfe52457cbcdbda9a9d9 339 SMART SM00363 15 72 0.0022 T 14-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 AY555_RS00820 23596417fb96bfe52457cbcdbda9a9d9 339 SUPERFAMILY SSF55120 96 325 2.56E-61 T 14-09-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AY555_RS00820 23596417fb96bfe52457cbcdbda9a9d9 339 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 12 316 2.8E-65 T 14-09-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AY555_RS00820 23596417fb96bfe52457cbcdbda9a9d9 339 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 144 158 - T 14-09-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AY555_RS00820 23596417fb96bfe52457cbcdbda9a9d9 339 PANTHER PTHR11079 97 329 9.9E-78 T 14-09-2016 AY555_RS00820 23596417fb96bfe52457cbcdbda9a9d9 339 PANTHER PTHR11079 41 54 9.9E-78 T 14-09-2016 AY555_RS00820 23596417fb96bfe52457cbcdbda9a9d9 339 Pfam PF00849 RNA pseudouridylate synthase 104 254 5.8E-34 T 14-09-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AY555_RS00820 23596417fb96bfe52457cbcdbda9a9d9 339 Pfam PF01479 S4 domain 15 61 5.4E-5 T 14-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 AY555_RS00820 23596417fb96bfe52457cbcdbda9a9d9 339 PANTHER PTHR11079:SF74 97 329 9.9E-78 T 14-09-2016 AY555_RS00820 23596417fb96bfe52457cbcdbda9a9d9 339 PANTHER PTHR11079:SF74 41 54 9.9E-78 T 14-09-2016 AY555_RS00820 23596417fb96bfe52457cbcdbda9a9d9 339 SUPERFAMILY SSF55174 15 66 3.27E-8 T 14-09-2016 AY555_RS02245 b02f3a03e4d4038ffe7b804fee10fa95 497 SMART SM00086 444 486 6.6E-5 T 14-09-2016 IPR001610 PAC motif AY555_RS02245 b02f3a03e4d4038ffe7b804fee10fa95 497 Gene3D G3DSA:3.30.450.20 381 480 6.3E-20 T 14-09-2016 AY555_RS02245 b02f3a03e4d4038ffe7b804fee10fa95 497 SUPERFAMILY SSF55785 380 480 1.15E-23 T 14-09-2016 IPR000014 PAS domain AY555_RS02245 b02f3a03e4d4038ffe7b804fee10fa95 497 SMART SM00091 372 438 0.005 T 14-09-2016 IPR000014 PAS domain AY555_RS02245 b02f3a03e4d4038ffe7b804fee10fa95 497 Pfam PF13426 PAS domain 383 481 4.0E-11 T 14-09-2016 IPR000014 PAS domain AY555_RS02245 b02f3a03e4d4038ffe7b804fee10fa95 497 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 375 479 2.3E-11 T 14-09-2016 IPR000014 PAS domain AY555_RS05510 b1f8607a9627be105661de7ba6cd3d4d 387 Gene3D G3DSA:3.40.640.10 8 254 4.5E-70 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AY555_RS05510 b1f8607a9627be105661de7ba6cd3d4d 387 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 14 376 1.9E-105 T 14-09-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AY555_RS05510 b1f8607a9627be105661de7ba6cd3d4d 387 PIRSF PIRSF000390 3 384 1.7E-92 T 14-09-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AY555_RS05510 b1f8607a9627be105661de7ba6cd3d4d 387 PANTHER PTHR30244:SF3 8 383 2.5E-105 T 14-09-2016 AY555_RS05510 b1f8607a9627be105661de7ba6cd3d4d 387 Gene3D G3DSA:3.90.1150.10 257 382 4.3E-27 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AY555_RS05510 b1f8607a9627be105661de7ba6cd3d4d 387 SUPERFAMILY SSF53383 7 378 5.28E-91 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AY555_RS05510 b1f8607a9627be105661de7ba6cd3d4d 387 PANTHER PTHR30244 8 383 2.5E-105 T 14-09-2016 AY555_RS01270 47eacf07fcc18e6bdb62fdc038918a88 614 Pfam PF13662 Toprim domain 255 322 1.6E-18 T 14-09-2016 IPR006171 Toprim domain AY555_RS01270 47eacf07fcc18e6bdb62fdc038918a88 614 SUPERFAMILY SSF57783 2 99 2.21E-33 T 14-09-2016 AY555_RS01270 47eacf07fcc18e6bdb62fdc038918a88 614 SMART SM00400 34 88 2.8E-32 T 14-09-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AY555_RS01270 47eacf07fcc18e6bdb62fdc038918a88 614 SUPERFAMILY SSF56731 112 413 4.01E-99 T 14-09-2016 AY555_RS01270 47eacf07fcc18e6bdb62fdc038918a88 614 Pfam PF08275 DNA primase catalytic core, N-terminal domain 122 246 4.0E-38 T 14-09-2016 IPR013264 DNA primase, catalytic core, N-terminal AY555_RS01270 47eacf07fcc18e6bdb62fdc038918a88 614 PANTHER PTHR30313 1 430 2.5E-133 T 14-09-2016 AY555_RS01270 47eacf07fcc18e6bdb62fdc038918a88 614 SMART SM00493 254 325 1.5E-14 T 14-09-2016 IPR006171 Toprim domain AY555_RS01270 47eacf07fcc18e6bdb62fdc038918a88 614 Gene3D G3DSA:3.90.580.10 2 99 7.6E-35 T 14-09-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AY555_RS01270 47eacf07fcc18e6bdb62fdc038918a88 614 Gene3D G3DSA:3.40.1360.10 236 357 4.0E-44 T 14-09-2016 AY555_RS01270 47eacf07fcc18e6bdb62fdc038918a88 614 Pfam PF01807 CHC2 zinc finger 5 96 1.9E-32 T 14-09-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AY555_RS01270 47eacf07fcc18e6bdb62fdc038918a88 614 Gene3D G3DSA:3.90.980.10 112 235 9.5E-41 T 14-09-2016 IPR013264 DNA primase, catalytic core, N-terminal AY555_RS01270 47eacf07fcc18e6bdb62fdc038918a88 614 PIRSF PIRSF002811 1 563 2.2E-138 T 14-09-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AY555_RS01270 47eacf07fcc18e6bdb62fdc038918a88 614 TIGRFAM TIGR01391 dnaG: DNA primase 4 411 2.9E-129 T 14-09-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 AY555_RS01270 47eacf07fcc18e6bdb62fdc038918a88 614 Hamap MF_00974 DNA primase [dnaG]. 2 606 25.497 T 14-09-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AY555_RS02320 46296a9906316fb3cb7befd31c8a0b09 335 Gene3D G3DSA:3.20.20.70 19 328 1.6E-95 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS02320 46296a9906316fb3cb7befd31c8a0b09 335 PANTHER PTHR22976:SF1 14 332 1.0E-144 T 14-09-2016 AY555_RS02320 46296a9906316fb3cb7befd31c8a0b09 335 SUPERFAMILY SSF102114 18 329 4.71E-83 T 14-09-2016 AY555_RS02320 46296a9906316fb3cb7befd31c8a0b09 335 SMART SM00729 56 268 3.5E-38 T 14-09-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AY555_RS02320 46296a9906316fb3cb7befd31c8a0b09 335 Hamap MF_01694 Biotin synthase [bioB]. 18 329 39.675 T 14-09-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 AY555_RS02320 46296a9906316fb3cb7befd31c8a0b09 335 PIRSF PIRSF001619 7 334 2.1E-126 T 14-09-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 AY555_RS02320 46296a9906316fb3cb7befd31c8a0b09 335 Pfam PF04055 Radical SAM superfamily 63 216 2.1E-16 T 14-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AY555_RS02320 46296a9906316fb3cb7befd31c8a0b09 335 TIGRFAM TIGR00433 bioB: biotin synthase 28 326 3.2E-113 T 14-09-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 AY555_RS02320 46296a9906316fb3cb7befd31c8a0b09 335 SMART SM00876 233 328 1.1E-34 T 14-09-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 AY555_RS02320 46296a9906316fb3cb7befd31c8a0b09 335 PANTHER PTHR22976 14 332 1.0E-144 T 14-09-2016 AY555_RS02320 46296a9906316fb3cb7befd31c8a0b09 335 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 233 326 5.2E-16 T 14-09-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 AY555_RS07410 5bfa0a9c5ee87c552fbe0da9aa099850 360 SUPERFAMILY SSF57997 44 205 7.19E-6 T 14-09-2016 AY555_RS07410 5bfa0a9c5ee87c552fbe0da9aa099850 360 Gene3D G3DSA:3.30.1330.60 231 357 1.2E-32 T 14-09-2016 IPR006665 OmpA-like domain AY555_RS07410 5bfa0a9c5ee87c552fbe0da9aa099850 360 PANTHER PTHR30329:SF4 139 355 2.6E-27 T 14-09-2016 AY555_RS07410 5bfa0a9c5ee87c552fbe0da9aa099850 360 Pfam PF00691 OmpA family 245 351 6.0E-20 T 14-09-2016 IPR006665 OmpA-like domain AY555_RS07410 5bfa0a9c5ee87c552fbe0da9aa099850 360 PANTHER PTHR30329 139 355 2.6E-27 T 14-09-2016 AY555_RS07410 5bfa0a9c5ee87c552fbe0da9aa099850 360 SUPERFAMILY SSF103088 230 357 2.22E-29 T 14-09-2016 IPR006665 OmpA-like domain AY555_RS07835 6e7a346bd48911df9e5792834ef1ea41 122 SUPERFAMILY SSF54593 1 121 1.48E-34 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AY555_RS07835 6e7a346bd48911df9e5792834ef1ea41 122 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 1 121 4.7E-56 T 14-09-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 AY555_RS07835 6e7a346bd48911df9e5792834ef1ea41 122 PANTHER PTHR10374 1 120 8.4E-50 T 14-09-2016 AY555_RS07835 6e7a346bd48911df9e5792834ef1ea41 122 Gene3D G3DSA:3.10.180.10 1 121 3.4E-43 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AY555_RS07835 6e7a346bd48911df9e5792834ef1ea41 122 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 118 2.3E-20 T 14-09-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AY555_RS07805 1791776981c563fcad5ced4a0ea882e0 199 Gene3D G3DSA:3.30.910.20 22 65 3.1E-11 T 14-09-2016 AY555_RS07805 1791776981c563fcad5ced4a0ea882e0 199 Gene3D G3DSA:3.30.910.20 103 171 3.1E-11 T 14-09-2016 AY555_RS07805 1791776981c563fcad5ced4a0ea882e0 199 SUPERFAMILY SSF111384 31 171 7.59E-25 T 14-09-2016 IPR024930 Skp domain AY555_RS07805 1791776981c563fcad5ced4a0ea882e0 199 PANTHER PTHR35089 8 177 3.5E-19 T 14-09-2016 AY555_RS07805 1791776981c563fcad5ced4a0ea882e0 199 Pfam PF03938 Outer membrane protein (OmpH-like) 20 170 8.4E-24 T 14-09-2016 IPR005632 Chaperone protein Skp GO:0051082 AY555_RS07805 1791776981c563fcad5ced4a0ea882e0 199 SMART SM00935 14 171 5.0E-30 T 14-09-2016 IPR005632 Chaperone protein Skp GO:0051082 AY555_RS08475 f4134a6abff73c4551cc7e2e408a29a5 262 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 124 134 - T 14-09-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AY555_RS08475 f4134a6abff73c4551cc7e2e408a29a5 262 PANTHER PTHR10060:SF20 1 257 8.6E-127 T 14-09-2016 AY555_RS08475 f4134a6abff73c4551cc7e2e408a29a5 262 PIRSF PIRSF005902 1 258 1.1E-80 T 14-09-2016 IPR001130 TatD family GO:0016788 AY555_RS08475 f4134a6abff73c4551cc7e2e408a29a5 262 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 14-09-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AY555_RS08475 f4134a6abff73c4551cc7e2e408a29a5 262 Gene3D G3DSA:3.20.20.140 1 254 2.7E-91 T 14-09-2016 AY555_RS08475 f4134a6abff73c4551cc7e2e408a29a5 262 PANTHER PTHR10060 1 257 8.6E-127 T 14-09-2016 IPR001130 TatD family GO:0016788 AY555_RS08475 f4134a6abff73c4551cc7e2e408a29a5 262 Pfam PF01026 TatD related DNase 3 254 5.0E-79 T 14-09-2016 IPR001130 TatD family GO:0016788 AY555_RS08475 f4134a6abff73c4551cc7e2e408a29a5 262 SUPERFAMILY SSF51556 1 254 5.74E-91 T 14-09-2016 IPR032466 Metal-dependent hydrolase AY555_RS08475 f4134a6abff73c4551cc7e2e408a29a5 262 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 254 2.6E-87 T 14-09-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 AY555_RS07585 7c23a0c64f670229d2afecaceb3ffb07 482 PANTHER PTHR30508 17 482 1.3E-301 T 14-09-2016 AY555_RS07585 7c23a0c64f670229d2afecaceb3ffb07 482 Pfam PF01458 Uncharacterized protein family (UPF0051) 220 453 2.6E-66 T 14-09-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 AY555_RS07585 7c23a0c64f670229d2afecaceb3ffb07 482 PANTHER PTHR30508:SF1 17 482 1.3E-301 T 14-09-2016 AY555_RS07585 7c23a0c64f670229d2afecaceb3ffb07 482 SUPERFAMILY SSF101960 37 479 4.05E-136 T 14-09-2016 AY555_RS07585 7c23a0c64f670229d2afecaceb3ffb07 482 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 16 473 3.9E-190 T 14-09-2016 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 AY555_RS09360 542d7fda05e346d34ae5d2855c805a06 118 PRINTS PR00956 Flagellar motor switch protein FliN signature 76 89 1.8E-24 T 14-09-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AY555_RS09360 542d7fda05e346d34ae5d2855c805a06 118 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 104 1.8E-24 T 14-09-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AY555_RS09360 542d7fda05e346d34ae5d2855c805a06 118 PRINTS PR00956 Flagellar motor switch protein FliN signature 60 76 1.8E-24 T 14-09-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AY555_RS09360 542d7fda05e346d34ae5d2855c805a06 118 PRINTS PR00956 Flagellar motor switch protein FliN signature 43 59 1.8E-24 T 14-09-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AY555_RS09360 542d7fda05e346d34ae5d2855c805a06 118 Gene3D G3DSA:2.30.330.10 34 116 3.3E-31 T 14-09-2016 AY555_RS09360 542d7fda05e346d34ae5d2855c805a06 118 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 43 113 2.5E-24 T 14-09-2016 IPR001543 Surface presentation of antigen (SpoA) AY555_RS09360 542d7fda05e346d34ae5d2855c805a06 118 PANTHER PTHR30034 14 117 1.9E-20 T 14-09-2016 AY555_RS09360 542d7fda05e346d34ae5d2855c805a06 118 SUPERFAMILY SSF101801 40 117 2.75E-22 T 14-09-2016 IPR001543 Surface presentation of antigen (SpoA) AY555_RS09360 542d7fda05e346d34ae5d2855c805a06 118 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 41 115 3.5E-31 T 14-09-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 AY555_RS09360 542d7fda05e346d34ae5d2855c805a06 118 PANTHER PTHR30034:SF1 14 117 1.9E-20 T 14-09-2016 AY555_RS05995 6b8ef2ac5001f78301bc025a130d06da 652 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 517 535 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05995 6b8ef2ac5001f78301bc025a130d06da 652 PRINTS PR00313 NodO calcium binding signature 228 236 1.6E-9 T 14-09-2016 AY555_RS05995 6b8ef2ac5001f78301bc025a130d06da 652 PRINTS PR00313 NodO calcium binding signature 338 346 1.6E-9 T 14-09-2016 AY555_RS05995 6b8ef2ac5001f78301bc025a130d06da 652 PRINTS PR00313 NodO calcium binding signature 207 218 1.6E-9 T 14-09-2016 AY555_RS05995 6b8ef2ac5001f78301bc025a130d06da 652 PRINTS PR00313 NodO calcium binding signature 347 356 1.6E-9 T 14-09-2016 AY555_RS05995 6b8ef2ac5001f78301bc025a130d06da 652 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 417 435 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05995 6b8ef2ac5001f78301bc025a130d06da 652 SUPERFAMILY SSF51120 447 625 2.09E-24 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05995 6b8ef2ac5001f78301bc025a130d06da 652 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 334 352 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05995 6b8ef2ac5001f78301bc025a130d06da 652 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 526 544 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05995 6b8ef2ac5001f78301bc025a130d06da 652 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 325 343 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05995 6b8ef2ac5001f78301bc025a130d06da 652 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 338 353 0.13 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05995 6b8ef2ac5001f78301bc025a130d06da 652 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 538 554 0.0025 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05995 6b8ef2ac5001f78301bc025a130d06da 652 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 520 537 0.091 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05995 6b8ef2ac5001f78301bc025a130d06da 652 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 134 145 33.0 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05995 6b8ef2ac5001f78301bc025a130d06da 652 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 228 244 0.039 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05995 6b8ef2ac5001f78301bc025a130d06da 652 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 210 221 53.0 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05995 6b8ef2ac5001f78301bc025a130d06da 652 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 485 500 2.4 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05995 6b8ef2ac5001f78301bc025a130d06da 652 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 412 428 1.0E-4 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05995 6b8ef2ac5001f78301bc025a130d06da 652 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 245 258 15.0 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05995 6b8ef2ac5001f78301bc025a130d06da 652 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 429 444 61.0 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05995 6b8ef2ac5001f78301bc025a130d06da 652 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 503 519 0.2 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05995 6b8ef2ac5001f78301bc025a130d06da 652 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 394 410 13.0 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05995 6b8ef2ac5001f78301bc025a130d06da 652 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 301 312 7.0 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05995 6b8ef2ac5001f78301bc025a130d06da 652 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 154 166 6.8 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05995 6b8ef2ac5001f78301bc025a130d06da 652 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 319 336 0.09 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05995 6b8ef2ac5001f78301bc025a130d06da 652 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 233 251 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05995 6b8ef2ac5001f78301bc025a130d06da 652 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 535 553 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05995 6b8ef2ac5001f78301bc025a130d06da 652 SUPERFAMILY SSF51120 256 361 4.97E-15 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05995 6b8ef2ac5001f78301bc025a130d06da 652 SUPERFAMILY SSF51120 133 287 7.48E-14 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05995 6b8ef2ac5001f78301bc025a130d06da 652 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 508 526 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05995 6b8ef2ac5001f78301bc025a130d06da 652 Gene3D G3DSA:2.150.10.10 482 584 6.1E-23 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05995 6b8ef2ac5001f78301bc025a130d06da 652 Gene3D G3DSA:2.150.10.10 135 289 1.5E-16 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05995 6b8ef2ac5001f78301bc025a130d06da 652 Gene3D G3DSA:2.150.10.10 301 476 1.8E-25 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05995 6b8ef2ac5001f78301bc025a130d06da 652 SUPERFAMILY SSF51120 392 460 1.44E-12 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS00630 1db82c1e05e361a1ec1a2cccd1020efe 239 PANTHER PTHR30545 7 239 7.2E-75 T 14-09-2016 AY555_RS00630 1db82c1e05e361a1ec1a2cccd1020efe 239 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 6 232 7.5E-70 T 14-09-2016 IPR005224 Sugar fermentation stimulation protein AY555_RS00630 1db82c1e05e361a1ec1a2cccd1020efe 239 Pfam PF03749 Sugar fermentation stimulation protein 13 230 4.9E-76 T 14-09-2016 IPR005224 Sugar fermentation stimulation protein AY555_RS00630 1db82c1e05e361a1ec1a2cccd1020efe 239 PANTHER PTHR30545:SF2 7 239 7.2E-75 T 14-09-2016 AY555_RS00630 1db82c1e05e361a1ec1a2cccd1020efe 239 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 239 54.951 T 14-09-2016 IPR005224 Sugar fermentation stimulation protein AY555_RS04395 697c8a983096c3df856586373cda7184 379 SMART SM00382 31 375 0.0077 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS04395 697c8a983096c3df856586373cda7184 379 PANTHER PTHR32182 12 362 1.5E-25 T 14-09-2016 AY555_RS04395 697c8a983096c3df856586373cda7184 379 SUPERFAMILY SSF52540 14 372 3.51E-34 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04395 697c8a983096c3df856586373cda7184 379 ProSitePatterns PS00617 RecF protein signature 1. 133 153 - T 14-09-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 AY555_RS04395 697c8a983096c3df856586373cda7184 379 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 12 357 6.3E-51 T 14-09-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AY555_RS04395 697c8a983096c3df856586373cda7184 379 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 379 80.392 T 14-09-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AY555_RS04395 697c8a983096c3df856586373cda7184 379 ProSitePatterns PS00618 RecF protein signature 2. 322 340 - T 14-09-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 AY555_RS04395 697c8a983096c3df856586373cda7184 379 Pfam PF02463 RecF/RecN/SMC N terminal domain 12 348 1.0E-16 T 14-09-2016 IPR003395 RecF/RecN/SMC, N-terminal AY555_RS04395 697c8a983096c3df856586373cda7184 379 Gene3D G3DSA:3.40.50.300 250 371 8.0E-34 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04395 697c8a983096c3df856586373cda7184 379 Gene3D G3DSA:3.40.50.300 13 213 8.0E-34 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08670 34ce070f92ecc675a172f76ceef59b59 100 SUPERFAMILY SSF52833 9 92 1.79E-13 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS08670 34ce070f92ecc675a172f76ceef59b59 100 Gene3D G3DSA:3.40.30.10 9 90 1.1E-16 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS00045 c9db1e5d264edc99640f18d81f25f2cd 353 SUPERFAMILY SSF160544 245 352 9.29E-42 T 14-09-2016 IPR029025 Type III secretion system substrate exporter, C-terminal AY555_RS00045 c9db1e5d264edc99640f18d81f25f2cd 353 PANTHER PTHR30531 5 353 3.7E-118 T 14-09-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AY555_RS00045 c9db1e5d264edc99640f18d81f25f2cd 353 Gene3D G3DSA:3.40.1690.10 219 353 1.1E-60 T 14-09-2016 IPR029025 Type III secretion system substrate exporter, C-terminal AY555_RS00045 c9db1e5d264edc99640f18d81f25f2cd 353 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 348 2.2E-120 T 14-09-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AY555_RS00045 c9db1e5d264edc99640f18d81f25f2cd 353 PANTHER PTHR30531:SF0 5 353 3.7E-118 T 14-09-2016 AY555_RS00045 c9db1e5d264edc99640f18d81f25f2cd 353 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 8 352 2.1E-118 T 14-09-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 AY555_RS00045 c9db1e5d264edc99640f18d81f25f2cd 353 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 209 227 5.5E-43 T 14-09-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AY555_RS00045 c9db1e5d264edc99640f18d81f25f2cd 353 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 303 324 5.5E-43 T 14-09-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AY555_RS00045 c9db1e5d264edc99640f18d81f25f2cd 353 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 229 246 5.5E-43 T 14-09-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AY555_RS00045 c9db1e5d264edc99640f18d81f25f2cd 353 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 273 288 5.5E-43 T 14-09-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AY555_RS00045 c9db1e5d264edc99640f18d81f25f2cd 353 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 11 33 5.5E-43 T 14-09-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AY555_RS08885 77621de0c7e75a80e88a522ae8d02698 253 Pfam PF00121 Triosephosphate isomerase 7 248 2.2E-75 T 14-09-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 AY555_RS08885 77621de0c7e75a80e88a522ae8d02698 253 ProSitePatterns PS00171 Triosephosphate isomerase active site. 167 177 - T 14-09-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 AY555_RS08885 77621de0c7e75a80e88a522ae8d02698 253 PANTHER PTHR21139 1 252 6.2E-93 T 14-09-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 AY555_RS08885 77621de0c7e75a80e88a522ae8d02698 253 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 4 251 36.321 T 14-09-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 AY555_RS08885 77621de0c7e75a80e88a522ae8d02698 253 Gene3D G3DSA:3.20.20.70 4 251 1.8E-87 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS08885 77621de0c7e75a80e88a522ae8d02698 253 SUPERFAMILY SSF51351 4 251 1.96E-80 T 14-09-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 AY555_RS08885 77621de0c7e75a80e88a522ae8d02698 253 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 7 239 4.3E-50 T 14-09-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 AY555_RS05230 d78fac4fd2ee13cc5b47053709a0ae11 494 Gene3D G3DSA:1.20.210.10 14 473 2.4E-71 T 14-09-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AY555_RS05230 d78fac4fd2ee13cc5b47053709a0ae11 494 PANTHER PTHR10422:SF21 15 471 6.2E-252 T 14-09-2016 AY555_RS05230 d78fac4fd2ee13cc5b47053709a0ae11 494 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 16 474 4.5E-222 T 14-09-2016 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AY555_RS05230 d78fac4fd2ee13cc5b47053709a0ae11 494 PANTHER PTHR10422 15 471 6.2E-252 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AY555_RS05230 d78fac4fd2ee13cc5b47053709a0ae11 494 SUPERFAMILY SSF81442 17 474 5.76E-122 T 14-09-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AY555_RS05230 d78fac4fd2ee13cc5b47053709a0ae11 494 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 214 269 - T 14-09-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AY555_RS05230 d78fac4fd2ee13cc5b47053709a0ae11 494 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 21 454 2.9E-114 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AY555_RS07070 b3bf2ca4e99309815d6deae1ed6a27b5 471 SUPERFAMILY SSF52425 6 211 1.7E-49 T 14-09-2016 IPR006050 DNA photolyase, N-terminal AY555_RS07070 b3bf2ca4e99309815d6deae1ed6a27b5 471 Pfam PF00875 DNA photolyase 7 161 3.0E-45 T 14-09-2016 IPR006050 DNA photolyase, N-terminal AY555_RS07070 b3bf2ca4e99309815d6deae1ed6a27b5 471 PRINTS PR00147 DNA photolyase signature 322 338 1.5E-23 T 14-09-2016 IPR002081 Cryptochrome/DNA photolyase class 1 AY555_RS07070 b3bf2ca4e99309815d6deae1ed6a27b5 471 PRINTS PR00147 DNA photolyase signature 381 395 1.5E-23 T 14-09-2016 IPR002081 Cryptochrome/DNA photolyase class 1 AY555_RS07070 b3bf2ca4e99309815d6deae1ed6a27b5 471 PRINTS PR00147 DNA photolyase signature 142 158 1.5E-23 T 14-09-2016 IPR002081 Cryptochrome/DNA photolyase class 1 AY555_RS07070 b3bf2ca4e99309815d6deae1ed6a27b5 471 PRINTS PR00147 DNA photolyase signature 342 360 1.5E-23 T 14-09-2016 IPR002081 Cryptochrome/DNA photolyase class 1 AY555_RS07070 b3bf2ca4e99309815d6deae1ed6a27b5 471 Gene3D G3DSA:1.10.579.10 283 467 4.0E-72 T 14-09-2016 AY555_RS07070 b3bf2ca4e99309815d6deae1ed6a27b5 471 Gene3D G3DSA:3.40.50.620 3 146 2.4E-41 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS07070 b3bf2ca4e99309815d6deae1ed6a27b5 471 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 322 334 - T 14-09-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AY555_RS07070 b3bf2ca4e99309815d6deae1ed6a27b5 471 PANTHER PTHR11455:SF18 1 467 9.0E-184 T 14-09-2016 AY555_RS07070 b3bf2ca4e99309815d6deae1ed6a27b5 471 Pfam PF03441 FAD binding domain of DNA photolyase 273 465 5.0E-80 T 14-09-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain AY555_RS07070 b3bf2ca4e99309815d6deae1ed6a27b5 471 SUPERFAMILY SSF48173 196 466 1.13E-102 T 14-09-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain AY555_RS07070 b3bf2ca4e99309815d6deae1ed6a27b5 471 PANTHER PTHR11455 1 467 9.0E-184 T 14-09-2016 AY555_RS07070 b3bf2ca4e99309815d6deae1ed6a27b5 471 Gene3D G3DSA:1.25.40.80 147 282 6.7E-32 T 14-09-2016 AY555_RS03515 f3981a3d8bd6b4e3543388c964cb566b 442 Gene3D G3DSA:2.40.10.10 243 321 8.9E-19 T 14-09-2016 AY555_RS03515 f3981a3d8bd6b4e3543388c964cb566b 442 Gene3D G3DSA:2.40.10.10 326 418 1.8E-18 T 14-09-2016 AY555_RS03515 f3981a3d8bd6b4e3543388c964cb566b 442 PANTHER PTHR22939 246 410 1.4E-31 T 14-09-2016 AY555_RS03515 f3981a3d8bd6b4e3543388c964cb566b 442 SUPERFAMILY SSF50494 244 418 6.22E-38 T 14-09-2016 IPR009003 Peptidase S1, PA clan AY555_RS03515 f3981a3d8bd6b4e3543388c964cb566b 442 PRINTS PR00834 HtrA/DegQ protease family signature 271 283 1.1E-11 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AY555_RS03515 f3981a3d8bd6b4e3543388c964cb566b 442 PRINTS PR00834 HtrA/DegQ protease family signature 292 312 1.1E-11 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AY555_RS03515 f3981a3d8bd6b4e3543388c964cb566b 442 PRINTS PR00834 HtrA/DegQ protease family signature 364 381 1.1E-11 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AY555_RS03515 f3981a3d8bd6b4e3543388c964cb566b 442 PRINTS PR00834 HtrA/DegQ protease family signature 386 403 1.1E-11 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AY555_RS03515 f3981a3d8bd6b4e3543388c964cb566b 442 Pfam PF13365 Trypsin-like peptidase domain 263 393 2.9E-28 T 14-09-2016 AY555_RS07625 f8afe9075985adba6b1f303c084469c9 465 Gene3D G3DSA:3.40.50.1220 291 464 8.7E-86 T 14-09-2016 IPR029035 DHS-like NAD/FAD-binding domain AY555_RS07625 f8afe9075985adba6b1f303c084469c9 465 PANTHER PTHR10160:SF24 1 464 2.1E-239 T 14-09-2016 AY555_RS07625 f8afe9075985adba6b1f303c084469c9 465 Pfam PF02233 NAD(P) transhydrogenase beta subunit 9 462 3.7E-190 T 14-09-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 AY555_RS07625 f8afe9075985adba6b1f303c084469c9 465 SUPERFAMILY SSF52467 293 465 4.46E-75 T 14-09-2016 IPR029035 DHS-like NAD/FAD-binding domain AY555_RS07625 f8afe9075985adba6b1f303c084469c9 465 PIRSF PIRSF000204 2 465 2.0E-213 T 14-09-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 AY555_RS07625 f8afe9075985adba6b1f303c084469c9 465 PANTHER PTHR10160 1 464 2.1E-239 T 14-09-2016 AY555_RS04120 a2b6e83bd86b6b08cacb67b52bb193f1 316 Gene3D G3DSA:3.40.50.20 3 129 4.9E-49 T 14-09-2016 IPR016185 Pre-ATP-grasp domain AY555_RS04120 a2b6e83bd86b6b08cacb67b52bb193f1 316 PANTHER PTHR21621:SF4 1 311 8.3E-116 T 14-09-2016 AY555_RS04120 a2b6e83bd86b6b08cacb67b52bb193f1 316 PANTHER PTHR21621 1 311 8.3E-116 T 14-09-2016 AY555_RS04120 a2b6e83bd86b6b08cacb67b52bb193f1 316 Gene3D G3DSA:3.30.470.20 192 299 3.5E-47 T 14-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AY555_RS04120 a2b6e83bd86b6b08cacb67b52bb193f1 316 TIGRFAM TIGR01380 glut_syn: glutathione synthase 3 309 3.6E-124 T 14-09-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 AY555_RS04120 a2b6e83bd86b6b08cacb67b52bb193f1 316 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 157.048 T 14-09-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 AY555_RS04120 a2b6e83bd86b6b08cacb67b52bb193f1 316 Gene3D G3DSA:3.30.1490.20 137 191 2.2E-27 T 14-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AY555_RS04120 a2b6e83bd86b6b08cacb67b52bb193f1 316 SUPERFAMILY SSF56059 124 309 1.41E-57 T 14-09-2016 AY555_RS04120 a2b6e83bd86b6b08cacb67b52bb193f1 316 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 4 120 5.9E-41 T 14-09-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 AY555_RS04120 a2b6e83bd86b6b08cacb67b52bb193f1 316 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 295 9.4E-72 T 14-09-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 AY555_RS04120 a2b6e83bd86b6b08cacb67b52bb193f1 316 SUPERFAMILY SSF52440 3 122 1.09E-39 T 14-09-2016 IPR016185 Pre-ATP-grasp domain AY555_RS08980 ba20ba5a017e4e163e1a254f8cda9af5 341 Pfam PF13343 Bacterial extracellular solute-binding protein 75 298 1.8E-24 T 14-09-2016 AY555_RS08980 ba20ba5a017e4e163e1a254f8cda9af5 341 PANTHER PTHR30006 27 335 8.0E-148 T 14-09-2016 AY555_RS08980 ba20ba5a017e4e163e1a254f8cda9af5 341 PANTHER PTHR30006:SF4 27 335 8.0E-148 T 14-09-2016 AY555_RS08980 ba20ba5a017e4e163e1a254f8cda9af5 341 SUPERFAMILY SSF53850 27 334 8.25E-77 T 14-09-2016 AY555_RS08980 ba20ba5a017e4e163e1a254f8cda9af5 341 Gene3D G3DSA:3.40.190.10 126 269 8.8E-55 T 14-09-2016 AY555_RS08980 ba20ba5a017e4e163e1a254f8cda9af5 341 PIRSF PIRSF002825 3 340 1.4E-85 T 14-09-2016 IPR026045 Ferric binding protein AY555_RS08980 ba20ba5a017e4e163e1a254f8cda9af5 341 Gene3D G3DSA:3.40.190.10 270 313 1.9E-27 T 14-09-2016 AY555_RS08980 ba20ba5a017e4e163e1a254f8cda9af5 341 Gene3D G3DSA:3.40.190.10 10 122 1.9E-27 T 14-09-2016 AY555_RS04930 88d9016375f265b4a332b3f6434724d0 143 PANTHER PTHR22769 11 139 1.0E-33 T 14-09-2016 AY555_RS04930 88d9016375f265b4a332b3f6434724d0 143 Gene3D G3DSA:3.90.79.10 16 139 2.6E-37 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AY555_RS04930 88d9016375f265b4a332b3f6434724d0 143 TIGRFAM TIGR00586 mutt: mutator mutT protein 15 139 1.3E-30 T 14-09-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 AY555_RS04930 88d9016375f265b4a332b3f6434724d0 143 PRINTS PR00502 NUDIX hydrolase family signature 44 58 4.2E-10 T 14-09-2016 IPR020476 NUDIX hydrolase AY555_RS04930 88d9016375f265b4a332b3f6434724d0 143 PRINTS PR00502 NUDIX hydrolase family signature 58 73 4.2E-10 T 14-09-2016 IPR020476 NUDIX hydrolase AY555_RS04930 88d9016375f265b4a332b3f6434724d0 143 SUPERFAMILY SSF55811 10 138 1.27E-41 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AY555_RS04930 88d9016375f265b4a332b3f6434724d0 143 Pfam PF00293 NUDIX domain 18 136 1.2E-21 T 14-09-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AY555_RS04930 88d9016375f265b4a332b3f6434724d0 143 ProSitePatterns PS00893 Nudix box signature. 49 70 - T 14-09-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AY555_RS04930 88d9016375f265b4a332b3f6434724d0 143 PANTHER PTHR22769:SF35 11 139 1.0E-33 T 14-09-2016 AY555_RS05895 c53baa4abe0bdb09485989465cdab8ab 278 PANTHER PTHR24322 15 146 7.4E-56 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS05895 c53baa4abe0bdb09485989465cdab8ab 278 PANTHER PTHR24322:SF317 15 146 7.4E-56 T 14-09-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 AY555_RS05895 c53baa4abe0bdb09485989465cdab8ab 278 PANTHER PTHR24322 162 194 7.4E-56 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS05895 c53baa4abe0bdb09485989465cdab8ab 278 PIRSF PIRSF000094 5 262 4.9E-112 T 14-09-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 AY555_RS05895 c53baa4abe0bdb09485989465cdab8ab 278 PANTHER PTHR24322:SF317 162 194 7.4E-56 T 14-09-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 AY555_RS05895 c53baa4abe0bdb09485989465cdab8ab 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 1.5E-7 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS05895 c53baa4abe0bdb09485989465cdab8ab 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 1.5E-7 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS05895 c53baa4abe0bdb09485989465cdab8ab 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.5E-7 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS05895 c53baa4abe0bdb09485989465cdab8ab 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 1.5E-7 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS05895 c53baa4abe0bdb09485989465cdab8ab 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.5E-7 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS05895 c53baa4abe0bdb09485989465cdab8ab 278 Gene3D G3DSA:3.40.50.720 11 204 1.2E-66 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS05895 c53baa4abe0bdb09485989465cdab8ab 278 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 255 1.7E-86 T 14-09-2016 AY555_RS05895 c53baa4abe0bdb09485989465cdab8ab 278 SUPERFAMILY SSF51735 10 258 2.5E-64 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS03805 ebbcc8027db77833bf0a8f9657b29d90 436 SMART SM01086 328 422 5.7E-20 T 14-09-2016 IPR019489 Clp ATPase, C-terminal AY555_RS03805 ebbcc8027db77833bf0a8f9657b29d90 436 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 5 436 6.0E-181 T 14-09-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AY555_RS03805 ebbcc8027db77833bf0a8f9657b29d90 436 SMART SM00382 49 309 1.5E-9 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS03805 ebbcc8027db77833bf0a8f9657b29d90 436 PANTHER PTHR11262:SF3 211 436 1.2E-200 T 14-09-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AY555_RS03805 ebbcc8027db77833bf0a8f9657b29d90 436 PANTHER PTHR11262:SF3 1 105 1.2E-200 T 14-09-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AY555_RS03805 ebbcc8027db77833bf0a8f9657b29d90 436 Gene3D G3DSA:1.10.8.10 206 236 8.0E-25 T 14-09-2016 AY555_RS03805 ebbcc8027db77833bf0a8f9657b29d90 436 Gene3D G3DSA:1.10.8.10 112 166 8.0E-25 T 14-09-2016 AY555_RS03805 ebbcc8027db77833bf0a8f9657b29d90 436 PANTHER PTHR11262 211 436 1.2E-200 T 14-09-2016 AY555_RS03805 ebbcc8027db77833bf0a8f9657b29d90 436 PANTHER PTHR11262 1 105 1.2E-200 T 14-09-2016 AY555_RS03805 ebbcc8027db77833bf0a8f9657b29d90 436 Pfam PF07724 AAA domain (Cdc48 subfamily) 202 322 5.6E-38 T 14-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AY555_RS03805 ebbcc8027db77833bf0a8f9657b29d90 436 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 436 41.079 T 14-09-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AY555_RS03805 ebbcc8027db77833bf0a8f9657b29d90 436 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 105 1.9E-6 T 14-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AY555_RS03805 ebbcc8027db77833bf0a8f9657b29d90 436 Gene3D G3DSA:1.10.8.60 328 436 4.0E-33 T 14-09-2016 AY555_RS03805 ebbcc8027db77833bf0a8f9657b29d90 436 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 330 397 3.9E-6 T 14-09-2016 IPR019489 Clp ATPase, C-terminal AY555_RS03805 ebbcc8027db77833bf0a8f9657b29d90 436 Gene3D G3DSA:3.40.50.300 238 324 5.7E-51 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS03805 ebbcc8027db77833bf0a8f9657b29d90 436 Gene3D G3DSA:3.40.50.300 5 110 5.7E-51 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS03805 ebbcc8027db77833bf0a8f9657b29d90 436 SUPERFAMILY SSF52540 6 431 3.27E-84 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08170 c310553c0a58eaebf1c7751ebb2df3eb 197 SUPERFAMILY SSF63380 92 192 1.19E-29 T 14-09-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AY555_RS08170 c310553c0a58eaebf1c7751ebb2df3eb 197 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 191 6.1E-56 T 14-09-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AY555_RS08170 c310553c0a58eaebf1c7751ebb2df3eb 197 SUPERFAMILY SSF63380 1 91 4.25E-25 T 14-09-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AY555_RS08170 c310553c0a58eaebf1c7751ebb2df3eb 197 Pfam PF00677 Lumazine binding domain 3 85 9.5E-21 T 14-09-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AY555_RS08170 c310553c0a58eaebf1c7751ebb2df3eb 197 Pfam PF00677 Lumazine binding domain 98 182 1.8E-17 T 14-09-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AY555_RS08170 c310553c0a58eaebf1c7751ebb2df3eb 197 PANTHER PTHR21098 1 197 9.0E-83 T 14-09-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AY555_RS08170 c310553c0a58eaebf1c7751ebb2df3eb 197 PIRSF PIRSF000498 1 196 7.3E-70 T 14-09-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AY555_RS08170 c310553c0a58eaebf1c7751ebb2df3eb 197 Gene3D G3DSA:2.40.30.20 5 102 9.0E-30 T 14-09-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AY555_RS08170 c310553c0a58eaebf1c7751ebb2df3eb 197 Gene3D G3DSA:2.40.30.20 103 193 1.4E-27 T 14-09-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AY555_RS09270 39653010dc32186be9275e0f01e68675 1202 PANTHER PTHR11573 399 616 0.0 T 14-09-2016 AY555_RS09270 39653010dc32186be9275e0f01e68675 1202 PANTHER PTHR11573 835 941 0.0 T 14-09-2016 AY555_RS09270 39653010dc32186be9275e0f01e68675 1202 PANTHER PTHR11573 1155 1202 0.0 T 14-09-2016 AY555_RS09270 39653010dc32186be9275e0f01e68675 1202 PANTHER PTHR11573:SF18 641 746 0.0 T 14-09-2016 AY555_RS09270 39653010dc32186be9275e0f01e68675 1202 PANTHER PTHR11573:SF18 1 160 0.0 T 14-09-2016 AY555_RS09270 39653010dc32186be9275e0f01e68675 1202 SUPERFAMILY SSF51998 837 916 2.26E-126 T 14-09-2016 AY555_RS09270 39653010dc32186be9275e0f01e68675 1202 SUPERFAMILY SSF51998 395 714 2.26E-126 T 14-09-2016 AY555_RS09270 39653010dc32186be9275e0f01e68675 1202 SUPERFAMILY SSF51998 197 307 2.26E-126 T 14-09-2016 AY555_RS09270 39653010dc32186be9275e0f01e68675 1202 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 130 751 8.5E-139 T 14-09-2016 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AY555_RS09270 39653010dc32186be9275e0f01e68675 1202 Gene3D G3DSA:1.10.10.200 300 369 2.4E-5 T 14-09-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like AY555_RS09270 39653010dc32186be9275e0f01e68675 1202 PANTHER PTHR11573:SF18 835 941 0.0 T 14-09-2016 AY555_RS09270 39653010dc32186be9275e0f01e68675 1202 PANTHER PTHR11573 960 1122 0.0 T 14-09-2016 AY555_RS09270 39653010dc32186be9275e0f01e68675 1202 PANTHER PTHR11573:SF18 960 1122 0.0 T 14-09-2016 AY555_RS09270 39653010dc32186be9275e0f01e68675 1202 PANTHER PTHR11573 1 160 0.0 T 14-09-2016 AY555_RS09270 39653010dc32186be9275e0f01e68675 1202 Pfam PF08471 Class II vitamin B12-dependent ribonucleotide reductase 31 147 1.7E-39 T 14-09-2016 IPR013678 Ribonucleotide reductase class II vitamin B12-dependent, N-terminal domain GO:0004748|GO:0050897|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AY555_RS09270 39653010dc32186be9275e0f01e68675 1202 Pfam PF02867 Ribonucleotide reductase, barrel domain 198 750 7.0E-106 T 14-09-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AY555_RS09270 39653010dc32186be9275e0f01e68675 1202 Pfam PF02867 Ribonucleotide reductase, barrel domain 806 912 6.9E-16 T 14-09-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AY555_RS09270 39653010dc32186be9275e0f01e68675 1202 Gene3D G3DSA:3.20.70.20 663 709 1.2E-92 T 14-09-2016 AY555_RS09270 39653010dc32186be9275e0f01e68675 1202 Gene3D G3DSA:3.20.70.20 871 917 1.2E-92 T 14-09-2016 AY555_RS09270 39653010dc32186be9275e0f01e68675 1202 Gene3D G3DSA:3.20.70.20 390 590 1.2E-92 T 14-09-2016 AY555_RS09270 39653010dc32186be9275e0f01e68675 1202 Gene3D G3DSA:3.20.70.20 102 299 1.2E-92 T 14-09-2016 AY555_RS09270 39653010dc32186be9275e0f01e68675 1202 Gene3D G3DSA:3.20.70.20 45 65 1.2E-92 T 14-09-2016 AY555_RS09270 39653010dc32186be9275e0f01e68675 1202 PANTHER PTHR11573 641 746 0.0 T 14-09-2016 AY555_RS09270 39653010dc32186be9275e0f01e68675 1202 PANTHER PTHR11573:SF18 191 308 0.0 T 14-09-2016 AY555_RS09270 39653010dc32186be9275e0f01e68675 1202 PANTHER PTHR11573:SF18 399 616 0.0 T 14-09-2016 AY555_RS09270 39653010dc32186be9275e0f01e68675 1202 PANTHER PTHR11573 191 308 0.0 T 14-09-2016 AY555_RS09270 39653010dc32186be9275e0f01e68675 1202 PANTHER PTHR11573:SF18 1155 1202 0.0 T 14-09-2016 AY555_RS09270 39653010dc32186be9275e0f01e68675 1202 PRINTS PR01183 Ribonucleotide reductase large chain signature 542 564 1.6E-5 T 14-09-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AY555_RS09270 39653010dc32186be9275e0f01e68675 1202 PRINTS PR01183 Ribonucleotide reductase large chain signature 275 294 1.6E-5 T 14-09-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AY555_RS09270 39653010dc32186be9275e0f01e68675 1202 SUPERFAMILY SSF75625 296 380 5.76E-10 T 14-09-2016 IPR029072 YebC-like AY555_RS05555 bf2538992f9bf7bf67599024d4e77569 539 SUPERFAMILY SSF52374 15 334 4.56E-57 T 14-09-2016 AY555_RS05555 bf2538992f9bf7bf67599024d4e77569 539 SUPERFAMILY SSF48163 333 526 1.96E-39 T 14-09-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AY555_RS05555 bf2538992f9bf7bf67599024d4e77569 539 Hamap MF_00177 Lysine--tRNA ligase [lysS]. 13 526 29.408 T 14-09-2016 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 AY555_RS05555 bf2538992f9bf7bf67599024d4e77569 539 TIGRFAM TIGR00467 lysS_arch: lysine--tRNA ligase 40 343 6.6E-44 T 14-09-2016 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 AY555_RS05555 bf2538992f9bf7bf67599024d4e77569 539 Pfam PF01921 tRNA synthetases class I (K) 14 369 4.4E-132 T 14-09-2016 AY555_RS05555 bf2538992f9bf7bf67599024d4e77569 539 Gene3D G3DSA:3.40.50.620 281 323 1.3E-4 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS05555 bf2538992f9bf7bf67599024d4e77569 539 Gene3D G3DSA:1.10.10.350 430 525 1.7E-28 T 14-09-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AY555_RS05555 bf2538992f9bf7bf67599024d4e77569 539 PANTHER PTHR37940 4 530 4.2E-161 T 14-09-2016 AY555_RS05555 bf2538992f9bf7bf67599024d4e77569 539 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 46 55 - T 14-09-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS05555 bf2538992f9bf7bf67599024d4e77569 539 Gene3D G3DSA:3.40.50.620 15 197 3.4E-43 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS05555 bf2538992f9bf7bf67599024d4e77569 539 Gene3D G3DSA:3.40.50.620 235 280 3.4E-43 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS08600 ae444d05bd184beb7fa9c53528b78642 947 PANTHER PTHR32282:SF2 1 940 0.0 T 14-09-2016 AY555_RS08600 ae444d05bd184beb7fa9c53528b78642 947 Gene3D G3DSA:1.10.8.280 284 406 5.2E-38 T 14-09-2016 AY555_RS08600 ae444d05bd184beb7fa9c53528b78642 947 SUPERFAMILY SSF52540 615 909 3.33E-49 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08600 ae444d05bd184beb7fa9c53528b78642 947 Gene3D G3DSA:1.20.1580.10 91 129 1.4E-50 T 14-09-2016 AY555_RS08600 ae444d05bd184beb7fa9c53528b78642 947 Gene3D G3DSA:1.20.1580.10 249 282 1.4E-50 T 14-09-2016 AY555_RS08600 ae444d05bd184beb7fa9c53528b78642 947 Gene3D G3DSA:1.20.1580.10 407 479 1.4E-50 T 14-09-2016 AY555_RS08600 ae444d05bd184beb7fa9c53528b78642 947 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AY555_RS08600 ae444d05bd184beb7fa9c53528b78642 947 PANTHER PTHR32282 1 940 0.0 T 14-09-2016 AY555_RS08600 ae444d05bd184beb7fa9c53528b78642 947 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 22.828 T 14-09-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 AY555_RS08600 ae444d05bd184beb7fa9c53528b78642 947 SUPERFAMILY SSF52540 1 204 1.03E-47 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08600 ae444d05bd184beb7fa9c53528b78642 947 SUPERFAMILY SSF52540 433 571 1.03E-47 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08600 ae444d05bd184beb7fa9c53528b78642 947 Gene3D G3DSA:3.30.1490.20 200 247 1.9E-26 T 14-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AY555_RS08600 ae444d05bd184beb7fa9c53528b78642 947 Gene3D G3DSA:3.30.1490.20 130 153 1.9E-26 T 14-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AY555_RS08600 ae444d05bd184beb7fa9c53528b78642 947 Gene3D G3DSA:3.40.50.300 613 673 9.1E-59 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08600 ae444d05bd184beb7fa9c53528b78642 947 Gene3D G3DSA:3.40.50.300 480 597 2.6E-56 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08600 ae444d05bd184beb7fa9c53528b78642 947 Gene3D G3DSA:3.40.50.300 3 51 2.6E-56 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08600 ae444d05bd184beb7fa9c53528b78642 947 Gene3D G3DSA:3.40.50.300 821 938 9.1E-59 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08600 ae444d05bd184beb7fa9c53528b78642 947 ProSitePatterns PS00211 ABC transporters family signature. 489 503 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AY555_RS08600 ae444d05bd184beb7fa9c53528b78642 947 Gene3D G3DSA:1.20.1580.10 694 820 1.9E-53 T 14-09-2016 AY555_RS08600 ae444d05bd184beb7fa9c53528b78642 947 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 925 0.0 T 14-09-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 AY555_RS05975 23481bab0397b1fe69ce3e7d64511cc1 653 SUPERFAMILY SSF56601 248 613 2.36E-97 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AY555_RS05975 23481bab0397b1fe69ce3e7d64511cc1 653 PANTHER PTHR30627:SF2 3 645 1.2E-199 T 14-09-2016 AY555_RS05975 23481bab0397b1fe69ce3e7d64511cc1 653 PANTHER PTHR30627 3 645 1.2E-199 T 14-09-2016 AY555_RS05975 23481bab0397b1fe69ce3e7d64511cc1 653 Gene3D G3DSA:3.90.1310.10 127 246 2.9E-31 T 14-09-2016 AY555_RS05975 23481bab0397b1fe69ce3e7d64511cc1 653 Gene3D G3DSA:3.40.710.10 247 613 2.1E-106 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AY555_RS05975 23481bab0397b1fe69ce3e7d64511cc1 653 Pfam PF00905 Penicillin binding protein transpeptidase domain 265 606 3.2E-67 T 14-09-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AY555_RS05975 23481bab0397b1fe69ce3e7d64511cc1 653 SUPERFAMILY SSF56519 53 247 1.44E-43 T 14-09-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AY555_RS05975 23481bab0397b1fe69ce3e7d64511cc1 653 Pfam PF03717 Penicillin-binding Protein dimerisation domain 62 233 4.8E-39 T 14-09-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AY555_RS05975 23481bab0397b1fe69ce3e7d64511cc1 653 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 16 610 2.7E-217 T 14-09-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 AY555_RS08745 4b42afa6d912c037e209bb28f58ee0a3 199 PANTHER PTHR10371 12 195 4.9E-85 T 14-09-2016 AY555_RS08745 4b42afa6d912c037e209bb28f58ee0a3 199 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 27 169 2.0E-52 T 14-09-2016 AY555_RS08745 4b42afa6d912c037e209bb28f58ee0a3 199 Gene3D G3DSA:3.40.30.10 92 176 5.0E-8 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS08745 4b42afa6d912c037e209bb28f58ee0a3 199 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 27 169 2.2E-50 T 14-09-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 AY555_RS08745 4b42afa6d912c037e209bb28f58ee0a3 199 SUPERFAMILY SSF52833 18 183 8.95E-52 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS08745 4b42afa6d912c037e209bb28f58ee0a3 199 PIRSF PIRSF000216 1 199 1.0E-64 T 14-09-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 AY555_RS03915 c9a846eaaeeb9af87b7a35a92ebf2808 1517 Pfam PF04898 Glutamate synthase central domain 486 767 2.5E-95 T 14-09-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 AY555_RS03915 c9a846eaaeeb9af87b7a35a92ebf2808 1517 SUPERFAMILY SSF69336 1242 1504 1.7E-87 T 14-09-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AY555_RS03915 c9a846eaaeeb9af87b7a35a92ebf2808 1517 Gene3D G3DSA:3.20.20.70 852 1214 2.5E-172 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS03915 c9a846eaaeeb9af87b7a35a92ebf2808 1517 Gene3D G3DSA:3.20.20.70 475 814 2.8E-86 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS03915 c9a846eaaeeb9af87b7a35a92ebf2808 1517 SUPERFAMILY SSF56235 39 459 2.4E-141 T 14-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AY555_RS03915 c9a846eaaeeb9af87b7a35a92ebf2808 1517 PANTHER PTHR11938:SF1 29 1507 0.0 T 14-09-2016 AY555_RS03915 c9a846eaaeeb9af87b7a35a92ebf2808 1517 SUPERFAMILY SSF51395 473 1229 1.19E-252 T 14-09-2016 AY555_RS03915 c9a846eaaeeb9af87b7a35a92ebf2808 1517 Gene3D G3DSA:2.160.20.60 1245 1504 6.4E-91 T 14-09-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AY555_RS03915 c9a846eaaeeb9af87b7a35a92ebf2808 1517 PANTHER PTHR11938 29 1507 0.0 T 14-09-2016 AY555_RS03915 c9a846eaaeeb9af87b7a35a92ebf2808 1517 Pfam PF01493 GXGXG motif 1270 1453 3.5E-73 T 14-09-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AY555_RS03915 c9a846eaaeeb9af87b7a35a92ebf2808 1517 Pfam PF01645 Conserved region in glutamate synthase 829 1193 3.8E-155 T 14-09-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 AY555_RS03915 c9a846eaaeeb9af87b7a35a92ebf2808 1517 Pfam PF00310 Glutamine amidotransferases class-II 39 457 6.8E-153 T 14-09-2016 IPR017932 Glutamine amidotransferase type 2 domain AY555_RS03915 c9a846eaaeeb9af87b7a35a92ebf2808 1517 Gene3D G3DSA:3.60.20.10 39 465 2.7E-156 T 14-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AY555_RS03395 79bcf67333005b75dc9d6ea1408b1d79 175 PANTHER PTHR23133:SF3 1 171 2.4E-34 T 14-09-2016 AY555_RS03395 79bcf67333005b75dc9d6ea1408b1d79 175 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 1 141 9.3E-30 T 14-09-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA AY555_RS03395 79bcf67333005b75dc9d6ea1408b1d79 175 PANTHER PTHR23133 1 171 2.4E-34 T 14-09-2016 AY555_RS03395 79bcf67333005b75dc9d6ea1408b1d79 175 SUPERFAMILY SSF56784 2 170 2.17E-42 T 14-09-2016 IPR023214 HAD-like domain AY555_RS03395 79bcf67333005b75dc9d6ea1408b1d79 175 Pfam PF13242 HAD-hyrolase-like 94 165 7.7E-16 T 14-09-2016 AY555_RS03395 79bcf67333005b75dc9d6ea1408b1d79 175 Gene3D G3DSA:3.40.50.1000 2 169 1.1E-47 T 14-09-2016 IPR023214 HAD-like domain AY555_RS03395 79bcf67333005b75dc9d6ea1408b1d79 175 PIRSF PIRSF004682 1 173 1.9E-49 T 14-09-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 AY555_RS03395 79bcf67333005b75dc9d6ea1408b1d79 175 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 1 139 4.5E-38 T 14-09-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 AY555_RS07110 56c5acdd1b913df78465b6cecd34e9a3 411 Gene3D G3DSA:3.30.70.1250 114 233 4.8E-46 T 14-09-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 AY555_RS07110 56c5acdd1b913df78465b6cecd34e9a3 411 PIRSF PIRSF001491 1 403 2.5E-147 T 14-09-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 AY555_RS07110 56c5acdd1b913df78465b6cecd34e9a3 411 SUPERFAMILY SSF53649 234 401 1.74E-64 T 14-09-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AY555_RS07110 56c5acdd1b913df78465b6cecd34e9a3 411 SUPERFAMILY SSF53649 1 114 1.74E-64 T 14-09-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AY555_RS07110 56c5acdd1b913df78465b6cecd34e9a3 411 TIGRFAM TIGR01696 deoB: phosphopentomutase 2 395 1.6E-147 T 14-09-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 AY555_RS07110 56c5acdd1b913df78465b6cecd34e9a3 411 PANTHER PTHR21110 1 409 1.1E-133 T 14-09-2016 AY555_RS07110 56c5acdd1b913df78465b6cecd34e9a3 411 Pfam PF01676 Metalloenzyme superfamily 1 395 7.3E-37 T 14-09-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 AY555_RS07110 56c5acdd1b913df78465b6cecd34e9a3 411 PANTHER PTHR21110:SF0 1 409 1.1E-133 T 14-09-2016 AY555_RS07110 56c5acdd1b913df78465b6cecd34e9a3 411 SUPERFAMILY SSF143856 118 233 4.05E-44 T 14-09-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 AY555_RS07110 56c5acdd1b913df78465b6cecd34e9a3 411 Gene3D G3DSA:3.40.720.10 1 113 4.5E-63 T 14-09-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AY555_RS07110 56c5acdd1b913df78465b6cecd34e9a3 411 Gene3D G3DSA:3.40.720.10 237 396 4.5E-63 T 14-09-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AY555_RS07110 56c5acdd1b913df78465b6cecd34e9a3 411 Hamap MF_00740 Phosphopentomutase [deoB]. 1 404 49.713 T 14-09-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 AY555_RS05020 6e57ce5bcc3eca01b24d8652fadd32d3 212 SMART SM00479 30 206 1.3E-22 T 14-09-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III AY555_RS05020 6e57ce5bcc3eca01b24d8652fadd32d3 212 SUPERFAMILY SSF53098 27 203 7.9E-38 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AY555_RS05020 6e57ce5bcc3eca01b24d8652fadd32d3 212 Pfam PF00929 Exonuclease 32 195 5.8E-20 T 14-09-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III AY555_RS05020 6e57ce5bcc3eca01b24d8652fadd32d3 212 PANTHER PTHR30231:SF7 14 200 1.4E-64 T 14-09-2016 AY555_RS05020 6e57ce5bcc3eca01b24d8652fadd32d3 212 PANTHER PTHR30231 14 200 1.4E-64 T 14-09-2016 AY555_RS05020 6e57ce5bcc3eca01b24d8652fadd32d3 212 Gene3D G3DSA:3.30.420.10 27 202 3.3E-36 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AY555_RS07465 64b996e23b4455e1665a72c437a67be5 276 PANTHER PTHR36303:SF1 2 269 5.6E-117 T 14-09-2016 AY555_RS07465 64b996e23b4455e1665a72c437a67be5 276 PIRSF PIRSF004789 1 266 1.6E-83 T 14-09-2016 IPR005235 Metallophosphoesterase, YmdB-like AY555_RS07465 64b996e23b4455e1665a72c437a67be5 276 Pfam PF13277 YmdB-like protein 4 258 4.8E-97 T 14-09-2016 IPR005235 Metallophosphoesterase, YmdB-like AY555_RS07465 64b996e23b4455e1665a72c437a67be5 276 SUPERFAMILY SSF56300 1 260 1.25E-79 T 14-09-2016 IPR029052 Metallo-dependent phosphatase-like AY555_RS07465 64b996e23b4455e1665a72c437a67be5 276 Gene3D G3DSA:3.60.21.30 1 269 9.6E-104 T 14-09-2016 AY555_RS07465 64b996e23b4455e1665a72c437a67be5 276 PANTHER PTHR36303 2 269 5.6E-117 T 14-09-2016 AY555_RS02425 e112f8b238a95ad6d059a5b116c167d0 650 SUPERFAMILY SSF51735 298 570 7.7E-54 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS02425 e112f8b238a95ad6d059a5b116c167d0 650 PANTHER PTHR10366:SF256 300 574 8.7E-101 T 14-09-2016 AY555_RS02425 e112f8b238a95ad6d059a5b116c167d0 650 Gene3D G3DSA:3.40.50.720 300 550 8.4E-50 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS02425 e112f8b238a95ad6d059a5b116c167d0 650 PANTHER PTHR10366 300 574 8.7E-101 T 14-09-2016 AY555_RS02425 e112f8b238a95ad6d059a5b116c167d0 650 Pfam PF02719 Polysaccharide biosynthesis protein 301 588 3.2E-108 T 14-09-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain AY555_RS02425 e112f8b238a95ad6d059a5b116c167d0 650 Pfam PF13727 CoA-binding domain 74 214 6.4E-9 T 14-09-2016 AY555_RS03840 616d4fafbaeefeaab389647358881ffd 365 ProSitePatterns PS00534 Ferrochelatase signature. 187 205 - T 14-09-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 AY555_RS03840 616d4fafbaeefeaab389647358881ffd 365 TIGRFAM TIGR00109 hemH: ferrochelatase 3 321 1.3E-80 T 14-09-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 AY555_RS03840 616d4fafbaeefeaab389647358881ffd 365 Hamap MF_00323 Ferrochelatase [hemH]. 3 322 33.814 T 14-09-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 AY555_RS03840 616d4fafbaeefeaab389647358881ffd 365 Gene3D G3DSA:3.40.50.1400 229 322 2.7E-16 T 14-09-2016 AY555_RS03840 616d4fafbaeefeaab389647358881ffd 365 Gene3D G3DSA:3.40.50.1400 4 210 2.6E-57 T 14-09-2016 AY555_RS03840 616d4fafbaeefeaab389647358881ffd 365 Pfam PF00762 Ferrochelatase 5 321 3.6E-103 T 14-09-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 AY555_RS03840 616d4fafbaeefeaab389647358881ffd 365 SUPERFAMILY SSF53800 3 322 5.72E-93 T 14-09-2016 AY555_RS03840 616d4fafbaeefeaab389647358881ffd 365 PANTHER PTHR11108 3 322 7.2E-110 T 14-09-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 AY555_RS04180 ae6e5238f62a2b5f1e46b1de50281ad3 513 PANTHER PTHR38686 4 511 6.2E-57 T 14-09-2016 AY555_RS04180 ae6e5238f62a2b5f1e46b1de50281ad3 513 SUPERFAMILY SSF56317 212 485 3.14E-39 T 14-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AY555_RS04180 ae6e5238f62a2b5f1e46b1de50281ad3 513 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 54 455 9.2E-84 T 14-09-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 AY555_RS04180 ae6e5238f62a2b5f1e46b1de50281ad3 513 Pfam PF00795 Carbon-nitrogen hydrolase 288 465 1.5E-24 T 14-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AY555_RS04180 ae6e5238f62a2b5f1e46b1de50281ad3 513 Gene3D G3DSA:3.60.110.10 281 484 5.0E-26 T 14-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AY555_RS04180 ae6e5238f62a2b5f1e46b1de50281ad3 513 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 2 492 19.806 T 14-09-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 AY555_RS09640 c2c9ab838cdb9db1d7818d810f1b8683 459 PANTHER PTHR11986:SF8 1 444 8.7E-182 T 14-09-2016 AY555_RS09640 c2c9ab838cdb9db1d7818d810f1b8683 459 Pfam PF00202 Aminotransferase class-III 27 435 3.6E-109 T 14-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AY555_RS09640 c2c9ab838cdb9db1d7818d810f1b8683 459 Gene3D G3DSA:3.40.640.10 63 335 2.9E-89 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AY555_RS09640 c2c9ab838cdb9db1d7818d810f1b8683 459 Gene3D G3DSA:3.90.1150.10 3 62 3.8E-42 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AY555_RS09640 c2c9ab838cdb9db1d7818d810f1b8683 459 Gene3D G3DSA:3.90.1150.10 340 440 3.8E-42 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AY555_RS09640 c2c9ab838cdb9db1d7818d810f1b8683 459 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 249 286 - T 14-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AY555_RS09640 c2c9ab838cdb9db1d7818d810f1b8683 459 PANTHER PTHR11986 1 444 8.7E-182 T 14-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AY555_RS09640 c2c9ab838cdb9db1d7818d810f1b8683 459 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 14 436 5.3E-158 T 14-09-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 AY555_RS09640 c2c9ab838cdb9db1d7818d810f1b8683 459 SUPERFAMILY SSF53383 4 439 1.47E-113 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AY555_RS03270 42c16841c18bafc343ec539583d2820e 152 PANTHER PTHR34128 3 140 2.4E-49 T 14-09-2016 AY555_RS03270 42c16841c18bafc343ec539583d2820e 152 PANTHER PTHR34128:SF1 3 140 2.4E-49 T 14-09-2016 AY555_RS03270 42c16841c18bafc343ec539583d2820e 152 SUPERFAMILY SSF82093 29 133 2.35E-36 T 14-09-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AY555_RS03270 42c16841c18bafc343ec539583d2820e 152 Gene3D G3DSA:2.40.50.140 26 122 1.1E-34 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS03270 42c16841c18bafc343ec539583d2820e 152 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 1 138 31.535 T 14-09-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AY555_RS03270 42c16841c18bafc343ec539583d2820e 152 Pfam PF03100 CcmE 3 127 7.7E-43 T 14-09-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AY555_RS07770 38d4d74944386da7b7b0889bf34263ef 241 PANTHER PTHR21499 8 240 1.1E-107 T 14-09-2016 AY555_RS07770 38d4d74944386da7b7b0889bf34263ef 241 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 8 238 4.0E-100 T 14-09-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 AY555_RS07770 38d4d74944386da7b7b0889bf34263ef 241 SUPERFAMILY SSF53633 7 238 2.09E-69 T 14-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AY555_RS07770 38d4d74944386da7b7b0889bf34263ef 241 Pfam PF00696 Amino acid kinase family 9 217 1.2E-28 T 14-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AY555_RS07770 38d4d74944386da7b7b0889bf34263ef 241 Gene3D G3DSA:3.40.1160.10 6 238 1.0E-84 T 14-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AY555_RS07770 38d4d74944386da7b7b0889bf34263ef 241 PANTHER PTHR21499:SF23 8 240 1.1E-107 T 14-09-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 AY555_RS07770 38d4d74944386da7b7b0889bf34263ef 241 Hamap MF_01220_B Uridylate kinase [pyrH]. 5 238 44.163 T 14-09-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 AY555_RS07770 38d4d74944386da7b7b0889bf34263ef 241 PIRSF PIRSF005650 4 241 1.9E-93 T 14-09-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 AY555_RS00510 eba29dd7de13a6b5852bf52056da5a3a 295 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 28 290 50.461 T 14-09-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AY555_RS00510 eba29dd7de13a6b5852bf52056da5a3a 295 Pfam PF00398 Ribosomal RNA adenine dimethylase 30 251 4.3E-44 T 14-09-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AY555_RS00510 eba29dd7de13a6b5852bf52056da5a3a 295 Gene3D G3DSA:3.40.50.150 17 216 4.5E-64 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS00510 eba29dd7de13a6b5852bf52056da5a3a 295 PANTHER PTHR11727 15 287 1.7E-92 T 14-09-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AY555_RS00510 eba29dd7de13a6b5852bf52056da5a3a 295 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 30 289 1.3E-73 T 14-09-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AY555_RS00510 eba29dd7de13a6b5852bf52056da5a3a 295 SMART SM00650 44 216 2.0E-68 T 14-09-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 AY555_RS00510 eba29dd7de13a6b5852bf52056da5a3a 295 SUPERFAMILY SSF53335 23 291 1.96E-72 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS00510 eba29dd7de13a6b5852bf52056da5a3a 295 Gene3D G3DSA:1.10.8.100 220 289 2.1E-20 T 14-09-2016 IPR023165 rRNA adenine dimethylase-like AY555_RS03615 30c18ba4f8c4f348c143f3c0a2098d6f 281 SUPERFAMILY SSF54506 5 134 1.48E-39 T 14-09-2016 AY555_RS03615 30c18ba4f8c4f348c143f3c0a2098d6f 281 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 7 275 2.1E-74 T 14-09-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 AY555_RS03615 30c18ba4f8c4f348c143f3c0a2098d6f 281 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 68 82 - T 14-09-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 AY555_RS03615 30c18ba4f8c4f348c143f3c0a2098d6f 281 Gene3D G3DSA:3.10.310.10 126 264 6.1E-50 T 14-09-2016 AY555_RS03615 30c18ba4f8c4f348c143f3c0a2098d6f 281 PANTHER PTHR31689:SF0 2 281 1.6E-103 T 14-09-2016 AY555_RS03615 30c18ba4f8c4f348c143f3c0a2098d6f 281 Gene3D G3DSA:3.10.310.10 6 125 1.2E-38 T 14-09-2016 AY555_RS03615 30c18ba4f8c4f348c143f3c0a2098d6f 281 Pfam PF01678 Diaminopimelate epimerase 155 266 1.6E-26 T 14-09-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 AY555_RS03615 30c18ba4f8c4f348c143f3c0a2098d6f 281 Pfam PF01678 Diaminopimelate epimerase 7 125 3.7E-21 T 14-09-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 AY555_RS03615 30c18ba4f8c4f348c143f3c0a2098d6f 281 SUPERFAMILY SSF54506 150 275 8.9E-49 T 14-09-2016 AY555_RS03615 30c18ba4f8c4f348c143f3c0a2098d6f 281 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 5 277 33.885 T 14-09-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 AY555_RS03615 30c18ba4f8c4f348c143f3c0a2098d6f 281 PANTHER PTHR31689 2 281 1.6E-103 T 14-09-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 AY555_RS03285 8521b4a4a6462dc7074695db925cdad9 490 Pfam PF01467 Cytidylyltransferase-like 360 451 1.0E-14 T 14-09-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AY555_RS03285 8521b4a4a6462dc7074695db925cdad9 490 Gene3D G3DSA:3.40.50.620 356 474 7.0E-32 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS03285 8521b4a4a6462dc7074695db925cdad9 490 PANTHER PTHR10584 1 352 1.4E-100 T 14-09-2016 AY555_RS03285 8521b4a4a6462dc7074695db925cdad9 490 Pfam PF00294 pfkB family carbohydrate kinase 19 315 1.3E-37 T 14-09-2016 IPR011611 Carbohydrate kinase PfkB AY555_RS03285 8521b4a4a6462dc7074695db925cdad9 490 SUPERFAMILY SSF53613 20 327 1.87E-58 T 14-09-2016 IPR029056 Ribokinase-like AY555_RS03285 8521b4a4a6462dc7074695db925cdad9 490 Hamap MF_01603 Bifunctional protein HldE [hldE]. 11 489 40.615 T 14-09-2016 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 AY555_RS03285 8521b4a4a6462dc7074695db925cdad9 490 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 357 422 7.1E-16 T 14-09-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AY555_RS03285 8521b4a4a6462dc7074695db925cdad9 490 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 13 325 5.6E-107 T 14-09-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 AY555_RS03285 8521b4a4a6462dc7074695db925cdad9 490 PANTHER PTHR10584:SF159 1 352 1.4E-100 T 14-09-2016 AY555_RS03285 8521b4a4a6462dc7074695db925cdad9 490 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 347 487 1.0E-57 T 14-09-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 AY555_RS03285 8521b4a4a6462dc7074695db925cdad9 490 Gene3D G3DSA:3.40.1190.20 20 327 5.3E-63 T 14-09-2016 IPR029056 Ribokinase-like AY555_RS03285 8521b4a4a6462dc7074695db925cdad9 490 SUPERFAMILY SSF52374 356 486 1.75E-21 T 14-09-2016 AY555_RS06840 fb7a6483fae361e982cf108c5dacc702 445 PANTHER PTHR34475:SF1 5 192 1.9E-21 T 14-09-2016 AY555_RS06840 fb7a6483fae361e982cf108c5dacc702 445 Pfam PF13413 Helix-turn-helix domain 22 82 3.2E-20 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AY555_RS06840 fb7a6483fae361e982cf108c5dacc702 445 PANTHER PTHR34475 294 438 1.9E-21 T 14-09-2016 AY555_RS06840 fb7a6483fae361e982cf108c5dacc702 445 PANTHER PTHR34475:SF1 294 438 1.9E-21 T 14-09-2016 AY555_RS06840 fb7a6483fae361e982cf108c5dacc702 445 Gene3D G3DSA:1.10.260.40 17 90 3.5E-4 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AY555_RS06840 fb7a6483fae361e982cf108c5dacc702 445 PANTHER PTHR34475 5 192 1.9E-21 T 14-09-2016 AY555_RS06840 fb7a6483fae361e982cf108c5dacc702 445 Pfam PF13464 Domain of unknown function (DUF4115) 360 430 7.6E-16 T 14-09-2016 IPR025194 Domain of unknown function DUF4115 AY555_RS10830 ddeef7d890c9e326a2241cd6e4f21c23 570 Pfam PF05170 AsmA family 319 555 3.9E-18 T 14-09-2016 IPR007844 AsmA AY555_RS10830 ddeef7d890c9e326a2241cd6e4f21c23 570 Pfam PF05170 AsmA family 1 174 1.7E-20 T 14-09-2016 IPR007844 AsmA AY555_RS10830 ddeef7d890c9e326a2241cd6e4f21c23 570 PANTHER PTHR30441 1 211 2.0E-25 T 14-09-2016 AY555_RS02960 6649ad6521171277eaaf82763a489ea9 191 Gene3D G3DSA:3.30.70.1300 50 134 3.5E-24 T 14-09-2016 AY555_RS02960 6649ad6521171277eaaf82763a489ea9 191 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 9 191 36.496 T 14-09-2016 IPR003774 Protein of unknown function UPF0301 AY555_RS02960 6649ad6521171277eaaf82763a489ea9 191 PANTHER PTHR30327:SF1 10 191 6.6E-56 T 14-09-2016 AY555_RS02960 6649ad6521171277eaaf82763a489ea9 191 PANTHER PTHR30327 10 191 6.6E-56 T 14-09-2016 AY555_RS02960 6649ad6521171277eaaf82763a489ea9 191 Gene3D G3DSA:3.40.1740.10 10 48 8.3E-35 T 14-09-2016 AY555_RS02960 6649ad6521171277eaaf82763a489ea9 191 Gene3D G3DSA:3.40.1740.10 135 182 8.3E-35 T 14-09-2016 AY555_RS02960 6649ad6521171277eaaf82763a489ea9 191 Pfam PF02622 Uncharacterized ACR, COG1678 20 178 4.8E-51 T 14-09-2016 IPR003774 Protein of unknown function UPF0301 AY555_RS02960 6649ad6521171277eaaf82763a489ea9 191 SUPERFAMILY SSF143456 11 191 1.31E-61 T 14-09-2016 AY555_RS00115 7acfa5d24ac00c8eed1c92651339d4f6 187 Gene3D G3DSA:1.10.287.500 28 68 5.8E-7 T 14-09-2016 AY555_RS00115 7acfa5d24ac00c8eed1c92651339d4f6 187 Gene3D G3DSA:1.10.287.500 76 116 4.3E-11 T 14-09-2016 AY555_RS00115 7acfa5d24ac00c8eed1c92651339d4f6 187 SUPERFAMILY SSF75708 2 183 7.85E-37 T 14-09-2016 AY555_RS00115 7acfa5d24ac00c8eed1c92651339d4f6 187 Pfam PF04344 Chemotaxis phosphatase, CheZ 84 181 1.2E-8 T 14-09-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- AY555_RS08100 b54c2bdbf1080d3dc99444e344ebbf22 318 Hamap MF_00206 Lipoyl synthase [lipA]. 1 301 152.877 T 14-09-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 AY555_RS08100 b54c2bdbf1080d3dc99444e344ebbf22 318 SUPERFAMILY SSF102114 29 299 1.57E-65 T 14-09-2016 AY555_RS08100 b54c2bdbf1080d3dc99444e344ebbf22 318 PANTHER PTHR10949 15 309 2.3E-161 T 14-09-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 AY555_RS08100 b54c2bdbf1080d3dc99444e344ebbf22 318 PIRSF PIRSF005963 2 310 5.9E-134 T 14-09-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 AY555_RS08100 b54c2bdbf1080d3dc99444e344ebbf22 318 TIGRFAM TIGR00510 lipA: lipoyl synthase 3 295 4.8E-118 T 14-09-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 AY555_RS08100 b54c2bdbf1080d3dc99444e344ebbf22 318 Gene3D G3DSA:3.20.20.70 31 299 1.3E-71 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS08100 b54c2bdbf1080d3dc99444e344ebbf22 318 Pfam PF04055 Radical SAM superfamily 69 229 9.0E-13 T 14-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AY555_RS08100 b54c2bdbf1080d3dc99444e344ebbf22 318 SMART SM00729 63 271 1.6E-13 T 14-09-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AY555_RS01435 eb3bc21010e91d2335bc1afe7a85eef8 505 SUPERFAMILY SSF51905 5 229 1.64E-55 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS01435 eb3bc21010e91d2335bc1afe7a85eef8 505 SUPERFAMILY SSF51905 337 388 1.64E-55 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS01435 eb3bc21010e91d2335bc1afe7a85eef8 505 Gene3D G3DSA:3.50.50.60 330 388 4.5E-79 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS01435 eb3bc21010e91d2335bc1afe7a85eef8 505 Gene3D G3DSA:3.50.50.60 4 226 4.5E-79 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS01435 eb3bc21010e91d2335bc1afe7a85eef8 505 SUPERFAMILY SSF46977 420 497 8.76E-19 T 14-09-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 AY555_RS01435 eb3bc21010e91d2335bc1afe7a85eef8 505 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 2.2E-8 T 14-09-2016 AY555_RS01435 eb3bc21010e91d2335bc1afe7a85eef8 505 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 336 358 2.2E-8 T 14-09-2016 AY555_RS01435 eb3bc21010e91d2335bc1afe7a85eef8 505 Gene3D G3DSA:1.20.58.100 419 497 6.4E-15 T 14-09-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 AY555_RS01435 eb3bc21010e91d2335bc1afe7a85eef8 505 Pfam PF02910 Fumarate reductase flavoprotein C-term 459 495 1.3E-9 T 14-09-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 AY555_RS01435 eb3bc21010e91d2335bc1afe7a85eef8 505 Gene3D G3DSA:3.90.700.10 227 329 6.2E-28 T 14-09-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain AY555_RS01435 eb3bc21010e91d2335bc1afe7a85eef8 505 SUPERFAMILY SSF56425 221 333 4.93E-30 T 14-09-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain AY555_RS01435 eb3bc21010e91d2335bc1afe7a85eef8 505 PANTHER PTHR11632 5 497 1.0E-152 T 14-09-2016 AY555_RS01435 eb3bc21010e91d2335bc1afe7a85eef8 505 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 4 492 1.4E-136 T 14-09-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 AY555_RS01435 eb3bc21010e91d2335bc1afe7a85eef8 505 PANTHER PTHR11632:SF27 5 497 1.0E-152 T 14-09-2016 AY555_RS01435 eb3bc21010e91d2335bc1afe7a85eef8 505 Pfam PF00890 FAD binding domain 5 373 3.8E-76 T 14-09-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain AY555_RS01670 2ad7e34a6544946868a0cc66a311a376 149 PANTHER PTHR11911 17 149 6.9E-29 T 14-09-2016 AY555_RS01670 2ad7e34a6544946868a0cc66a311a376 149 Gene3D G3DSA:3.10.580.10 5 122 2.2E-35 T 14-09-2016 AY555_RS01670 2ad7e34a6544946868a0cc66a311a376 149 Pfam PF00571 CBS domain 71 124 5.9E-14 T 14-09-2016 IPR000644 CBS domain AY555_RS01670 2ad7e34a6544946868a0cc66a311a376 149 Pfam PF00571 CBS domain 16 59 5.1E-6 T 14-09-2016 IPR000644 CBS domain AY555_RS01670 2ad7e34a6544946868a0cc66a311a376 149 SMART SM00116 13 60 4.5E-4 T 14-09-2016 IPR000644 CBS domain AY555_RS01670 2ad7e34a6544946868a0cc66a311a376 149 SMART SM00116 78 126 4.9E-9 T 14-09-2016 IPR000644 CBS domain AY555_RS01670 2ad7e34a6544946868a0cc66a311a376 149 SUPERFAMILY SSF54631 4 138 6.06E-32 T 14-09-2016 AY555_RS02520 d6d0c9d4adf095fb70d51ac0585dfea8 448 Gene3D G3DSA:3.40.640.10 69 294 5.9E-18 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AY555_RS02520 d6d0c9d4adf095fb70d51ac0585dfea8 448 Pfam PF02347 Glycine cleavage system P-protein 1 442 9.8E-120 T 14-09-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 AY555_RS02520 d6d0c9d4adf095fb70d51ac0585dfea8 448 PANTHER PTHR11773 1 446 8.9E-185 T 14-09-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 AY555_RS02520 d6d0c9d4adf095fb70d51ac0585dfea8 448 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 1 446 43.74 T 14-09-2016 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 AY555_RS02520 d6d0c9d4adf095fb70d51ac0585dfea8 448 PIRSF PIRSF006815 1 447 3.1E-158 T 14-09-2016 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 AY555_RS02520 d6d0c9d4adf095fb70d51ac0585dfea8 448 PANTHER PTHR11773:SF2 1 446 8.9E-185 T 14-09-2016 AY555_RS02520 d6d0c9d4adf095fb70d51ac0585dfea8 448 SUPERFAMILY SSF53383 1 447 4.47E-110 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AY555_RS04325 e38527bf47c3cfabc3967498f2176896 314 PANTHER PTHR30537:SF26 1 314 2.8E-93 T 14-09-2016 AY555_RS04325 e38527bf47c3cfabc3967498f2176896 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.8E-6 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AY555_RS04325 e38527bf47c3cfabc3967498f2176896 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.8E-6 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AY555_RS04325 e38527bf47c3cfabc3967498f2176896 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.8E-6 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AY555_RS04325 e38527bf47c3cfabc3967498f2176896 314 Gene3D G3DSA:1.10.10.10 2 83 7.4E-25 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS04325 e38527bf47c3cfabc3967498f2176896 314 PANTHER PTHR30537 1 314 2.8E-93 T 14-09-2016 AY555_RS04325 e38527bf47c3cfabc3967498f2176896 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.1E-19 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AY555_RS04325 e38527bf47c3cfabc3967498f2176896 314 Pfam PF03466 LysR substrate binding domain 91 296 1.8E-29 T 14-09-2016 IPR005119 LysR, substrate-binding AY555_RS04325 e38527bf47c3cfabc3967498f2176896 314 Gene3D G3DSA:3.40.190.10 94 194 1.9E-25 T 14-09-2016 AY555_RS04325 e38527bf47c3cfabc3967498f2176896 314 SUPERFAMILY SSF46785 2 86 5.34E-22 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS04325 e38527bf47c3cfabc3967498f2176896 314 SUPERFAMILY SSF53850 89 301 2.35E-30 T 14-09-2016 AY555_RS00910 16dafa6f04c1b24166ffa5b3d1ef606b 104 SUPERFAMILY SSF50104 3 101 8.65E-35 T 14-09-2016 IPR008991 Translation protein SH3-like domain AY555_RS00910 16dafa6f04c1b24166ffa5b3d1ef606b 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 102 1.7E-37 T 14-09-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00910 16dafa6f04c1b24166ffa5b3d1ef606b 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 96 21.435 T 14-09-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00910 16dafa6f04c1b24166ffa5b3d1ef606b 104 Pfam PF00467 KOW motif 6 37 1.1E-6 T 14-09-2016 IPR005824 KOW AY555_RS00910 16dafa6f04c1b24166ffa5b3d1ef606b 104 PANTHER PTHR12903 3 102 4.0E-49 T 14-09-2016 AY555_RS00910 16dafa6f04c1b24166ffa5b3d1ef606b 104 Gene3D G3DSA:2.30.30.30 3 90 3.6E-26 T 14-09-2016 IPR014722 Ribosomal protein L2 domain 2 AY555_RS00910 16dafa6f04c1b24166ffa5b3d1ef606b 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 102 2.3E-28 T 14-09-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00910 16dafa6f04c1b24166ffa5b3d1ef606b 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 7 24 - T 14-09-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00910 16dafa6f04c1b24166ffa5b3d1ef606b 104 SMART SM00739 3 30 5.7E-6 T 14-09-2016 IPR005824 KOW AY555_RS03715 489006515ff32e649e350841e70f364a 219 PIRSF PIRSF031890 5 218 5.3E-59 T 14-09-2016 IPR016985 Uncharacterised conserved protein UCP031890, Tim44-related AY555_RS03715 489006515ff32e649e350841e70f364a 219 SUPERFAMILY SSF54427 71 217 6.72E-44 T 14-09-2016 IPR032710 NTF2-like domain AY555_RS03715 489006515ff32e649e350841e70f364a 219 PANTHER PTHR10721 73 212 3.2E-26 T 14-09-2016 AY555_RS03715 489006515ff32e649e350841e70f364a 219 Gene3D G3DSA:3.10.450.50 95 213 7.5E-4 T 14-09-2016 IPR032710 NTF2-like domain AY555_RS03715 489006515ff32e649e350841e70f364a 219 ProDom PD111165 RP434 8 125 0.002 T 14-09-2016 AY555_RS03715 489006515ff32e649e350841e70f364a 219 Pfam PF04280 Tim44-like domain 77 215 1.1E-39 T 14-09-2016 IPR007379 Tim44-like domain AY555_RS03715 489006515ff32e649e350841e70f364a 219 PANTHER PTHR10721:SF2 73 212 3.2E-26 T 14-09-2016 AY555_RS03715 489006515ff32e649e350841e70f364a 219 SMART SM00978 70 216 2.1E-45 T 14-09-2016 IPR007379 Tim44-like domain AY555_RS04445 ce8563d864466c13391ee23c1af71276 501 Pfam PF11638 DnaA N-terminal domain 18 76 4.8E-17 T 14-09-2016 IPR024633 DnaA N-terminal domain AY555_RS04445 ce8563d864466c13391ee23c1af71276 501 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 410 478 3.9E-30 T 14-09-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AY555_RS04445 ce8563d864466c13391ee23c1af71276 501 SMART SM00382 198 329 9.1E-9 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS04445 ce8563d864466c13391ee23c1af71276 501 SUPERFAMILY SSF52540 165 377 9.71E-40 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04445 ce8563d864466c13391ee23c1af71276 501 ProSitePatterns PS01008 DnaA protein signature. 459 478 - T 14-09-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AY555_RS04445 ce8563d864466c13391ee23c1af71276 501 SMART SM00760 409 478 5.5E-41 T 14-09-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AY555_RS04445 ce8563d864466c13391ee23c1af71276 501 PANTHER PTHR30050:SF2 164 501 5.9E-185 T 14-09-2016 AY555_RS04445 ce8563d864466c13391ee23c1af71276 501 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 18 499 8.0E-165 T 14-09-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AY555_RS04445 ce8563d864466c13391ee23c1af71276 501 Gene3D G3DSA:1.10.8.60 333 399 2.2E-25 T 14-09-2016 AY555_RS04445 ce8563d864466c13391ee23c1af71276 501 PANTHER PTHR30050:SF2 13 115 5.9E-185 T 14-09-2016 AY555_RS04445 ce8563d864466c13391ee23c1af71276 501 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 263 277 4.8E-47 T 14-09-2016 IPR020591 Chromosomal replication control, initiator DnaA-like AY555_RS04445 ce8563d864466c13391ee23c1af71276 501 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 459 478 4.8E-47 T 14-09-2016 IPR020591 Chromosomal replication control, initiator DnaA-like AY555_RS04445 ce8563d864466c13391ee23c1af71276 501 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 199 219 4.8E-47 T 14-09-2016 IPR020591 Chromosomal replication control, initiator DnaA-like AY555_RS04445 ce8563d864466c13391ee23c1af71276 501 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 231 245 4.8E-47 T 14-09-2016 IPR020591 Chromosomal replication control, initiator DnaA-like AY555_RS04445 ce8563d864466c13391ee23c1af71276 501 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 297 324 4.8E-47 T 14-09-2016 IPR020591 Chromosomal replication control, initiator DnaA-like AY555_RS04445 ce8563d864466c13391ee23c1af71276 501 Gene3D G3DSA:1.10.1750.10 400 500 1.3E-40 T 14-09-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AY555_RS04445 ce8563d864466c13391ee23c1af71276 501 Gene3D G3DSA:3.40.50.300 162 330 2.5E-58 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04445 ce8563d864466c13391ee23c1af71276 501 PANTHER PTHR30050 164 501 5.9E-185 T 14-09-2016 AY555_RS04445 ce8563d864466c13391ee23c1af71276 501 SUPERFAMILY SSF48295 396 500 1.18E-37 T 14-09-2016 IPR010921 Trp repressor/replication initiator GO:0043565 AY555_RS04445 ce8563d864466c13391ee23c1af71276 501 Pfam PF00308 Bacterial dnaA protein 166 382 1.4E-86 T 14-09-2016 IPR013317 Chromosomal replication initiator protein DnaA AY555_RS04445 ce8563d864466c13391ee23c1af71276 501 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 15 500 31.855 T 14-09-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AY555_RS04445 ce8563d864466c13391ee23c1af71276 501 PANTHER PTHR30050 13 115 5.9E-185 T 14-09-2016 AY555_RS06100 6684cfea2739b35709fbf8f999bfcb60 290 Pfam PF03799 Cell division protein FtsQ 135 251 8.9E-14 T 14-09-2016 IPR005548 Cell division protein FtsQ/DivIB AY555_RS06100 6684cfea2739b35709fbf8f999bfcb60 290 Pfam PF08478 POTRA domain, FtsQ-type 64 130 2.2E-17 T 14-09-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type AY555_RS06100 6684cfea2739b35709fbf8f999bfcb60 290 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 18 269 19.233 T 14-09-2016 IPR026579 Cell division protein FtsQ GO:0000917 AY555_RS06100 6684cfea2739b35709fbf8f999bfcb60 290 PANTHER PTHR35851:SF1 17 276 5.8E-25 T 14-09-2016 AY555_RS06100 6684cfea2739b35709fbf8f999bfcb60 290 PANTHER PTHR35851 17 276 5.8E-25 T 14-09-2016 AY555_RS00170 b49ccfb187d78e9e675e523a0a7119b6 140 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 97 132 3.8E-12 T 14-09-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AY555_RS00170 b49ccfb187d78e9e675e523a0a7119b6 140 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 102 126 - T 14-09-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AY555_RS00170 b49ccfb187d78e9e675e523a0a7119b6 140 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 20 129 1.0E-44 T 14-09-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AY555_RS00170 b49ccfb187d78e9e675e523a0a7119b6 140 PANTHER PTHR33823:SF2 1 135 5.1E-44 T 14-09-2016 AY555_RS00170 b49ccfb187d78e9e675e523a0a7119b6 140 SUPERFAMILY SSF57716 99 137 6.13E-9 T 14-09-2016 AY555_RS00170 b49ccfb187d78e9e675e523a0a7119b6 140 SUPERFAMILY SSF109635 5 98 4.84E-33 T 14-09-2016 AY555_RS00170 b49ccfb187d78e9e675e523a0a7119b6 140 PANTHER PTHR33823 1 135 5.1E-44 T 14-09-2016 AY555_RS00170 b49ccfb187d78e9e675e523a0a7119b6 140 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 16 138 28.983 T 14-09-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AY555_RS01880 3feceee59b1dc8eba40fb0d539dccb10 382 SUPERFAMILY SSF48371 301 370 3.74E-6 T 14-09-2016 IPR016024 Armadillo-type fold GO:0005488 AY555_RS01880 3feceee59b1dc8eba40fb0d539dccb10 382 PANTHER PTHR30002:SF4 1 368 4.0E-148 T 14-09-2016 AY555_RS01880 3feceee59b1dc8eba40fb0d539dccb10 382 Pfam PF13484 4Fe-4S double cluster binding domain 189 253 4.0E-19 T 14-09-2016 AY555_RS01880 3feceee59b1dc8eba40fb0d539dccb10 382 PANTHER PTHR30002 1 368 4.0E-148 T 14-09-2016 AY555_RS01880 3feceee59b1dc8eba40fb0d539dccb10 382 Pfam PF08331 Domain of unknown function (DUF1730) 61 137 3.0E-22 T 14-09-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 AY555_RS01880 3feceee59b1dc8eba40fb0d539dccb10 382 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 12 344 1.3E-133 T 14-09-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 AY555_RS01880 3feceee59b1dc8eba40fb0d539dccb10 382 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 5 312 45.534 T 14-09-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 AY555_RS01880 3feceee59b1dc8eba40fb0d539dccb10 382 Gene3D G3DSA:1.25.10.10 299 368 1.2E-4 T 14-09-2016 IPR011989 Armadillo-like helical AY555_RS01880 3feceee59b1dc8eba40fb0d539dccb10 382 Gene3D G3DSA:3.30.70.20 188 255 5.4E-8 T 14-09-2016 AY555_RS01880 3feceee59b1dc8eba40fb0d539dccb10 382 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 190 201 - T 14-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AY555_RS01880 3feceee59b1dc8eba40fb0d539dccb10 382 SUPERFAMILY SSF54862 166 282 4.18E-16 T 14-09-2016 AY555_RS04940 73c7c972f2d3be5341796a38a788a864 901 SUPERFAMILY SSF52540 404 612 6.26E-54 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04940 73c7c972f2d3be5341796a38a788a864 901 SUPERFAMILY SSF52540 7 228 4.03E-84 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04940 73c7c972f2d3be5341796a38a788a864 901 SUPERFAMILY SSF52540 355 401 4.03E-84 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04940 73c7c972f2d3be5341796a38a788a864 901 ProSitePatterns PS01312 SecA family signature. 488 503 - T 14-09-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 AY555_RS04940 73c7c972f2d3be5341796a38a788a864 901 PRINTS PR00906 SecA protein signature 363 380 4.2E-69 T 14-09-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AY555_RS04940 73c7c972f2d3be5341796a38a788a864 901 PRINTS PR00906 SecA protein signature 400 413 4.2E-69 T 14-09-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AY555_RS04940 73c7c972f2d3be5341796a38a788a864 901 PRINTS PR00906 SecA protein signature 170 190 4.2E-69 T 14-09-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AY555_RS04940 73c7c972f2d3be5341796a38a788a864 901 PRINTS PR00906 SecA protein signature 101 115 4.2E-69 T 14-09-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AY555_RS04940 73c7c972f2d3be5341796a38a788a864 901 PRINTS PR00906 SecA protein signature 117 127 4.2E-69 T 14-09-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AY555_RS04940 73c7c972f2d3be5341796a38a788a864 901 PRINTS PR00906 SecA protein signature 326 348 4.2E-69 T 14-09-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AY555_RS04940 73c7c972f2d3be5341796a38a788a864 901 PRINTS PR00906 SecA protein signature 63 87 4.2E-69 T 14-09-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AY555_RS04940 73c7c972f2d3be5341796a38a788a864 901 SMART SM00957 6 389 6.5E-295 T 14-09-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AY555_RS04940 73c7c972f2d3be5341796a38a788a864 901 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 809 0.0 T 14-09-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AY555_RS04940 73c7c972f2d3be5341796a38a788a864 901 Gene3D G3DSA:3.40.50.300 356 403 2.3E-125 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04940 73c7c972f2d3be5341796a38a788a864 901 Gene3D G3DSA:3.40.50.300 5 228 2.3E-125 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04940 73c7c972f2d3be5341796a38a788a864 901 Pfam PF02810 SEC-C motif 881 898 4.9E-8 T 14-09-2016 IPR004027 SEC-C motif AY555_RS04940 73c7c972f2d3be5341796a38a788a864 901 Gene3D G3DSA:3.90.1440.10 230 355 2.6E-44 T 14-09-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AY555_RS04940 73c7c972f2d3be5341796a38a788a864 901 Pfam PF07517 SecA DEAD-like domain 7 388 7.3E-132 T 14-09-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AY555_RS04940 73c7c972f2d3be5341796a38a788a864 901 SMART SM00958 228 345 1.1E-68 T 14-09-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AY555_RS04940 73c7c972f2d3be5341796a38a788a864 901 Pfam PF07516 SecA Wing and Scaffold domain 611 820 8.2E-62 T 14-09-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AY555_RS04940 73c7c972f2d3be5341796a38a788a864 901 PANTHER PTHR30612 4 508 0.0 T 14-09-2016 AY555_RS04940 73c7c972f2d3be5341796a38a788a864 901 PANTHER PTHR30612 544 901 0.0 T 14-09-2016 AY555_RS04940 73c7c972f2d3be5341796a38a788a864 901 SUPERFAMILY SSF81767 227 355 1.05E-41 T 14-09-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AY555_RS04940 73c7c972f2d3be5341796a38a788a864 901 Gene3D G3DSA:3.40.50.300 404 612 5.6E-87 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04940 73c7c972f2d3be5341796a38a788a864 901 Gene3D G3DSA:1.10.3060.10 642 822 2.5E-51 T 14-09-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AY555_RS04940 73c7c972f2d3be5341796a38a788a864 901 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 825 20.02 T 14-09-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AY555_RS04940 73c7c972f2d3be5341796a38a788a864 901 SUPERFAMILY SSF81886 877 889 9.42E-75 T 14-09-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AY555_RS04940 73c7c972f2d3be5341796a38a788a864 901 SUPERFAMILY SSF81886 614 833 9.42E-75 T 14-09-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AY555_RS04940 73c7c972f2d3be5341796a38a788a864 901 Pfam PF01043 SecA preprotein cross-linking domain 232 345 2.9E-37 T 14-09-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AY555_RS09720 f0624607a4e47de49ddddbd352a9c0f1 898 Gene3D G3DSA:3.30.470.20 247 356 4.6E-38 T 14-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AY555_RS09720 f0624607a4e47de49ddddbd352a9c0f1 898 Gene3D G3DSA:1.10.189.10 357 413 5.7E-30 T 14-09-2016 AY555_RS09720 f0624607a4e47de49ddddbd352a9c0f1 898 Gene3D G3DSA:3.50.30.10 414 519 8.8E-39 T 14-09-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AY555_RS09720 f0624607a4e47de49ddddbd352a9c0f1 898 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 773 791 - T 14-09-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AY555_RS09720 f0624607a4e47de49ddddbd352a9c0f1 898 SUPERFAMILY SSF52009 399 525 6.15E-37 T 14-09-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AY555_RS09720 f0624607a4e47de49ddddbd352a9c0f1 898 Gene3D G3DSA:3.20.20.60 545 884 4.2E-132 T 14-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AY555_RS09720 f0624607a4e47de49ddddbd352a9c0f1 898 Pfam PF00391 PEP-utilising enzyme, mobile domain 435 516 2.5E-25 T 14-09-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AY555_RS09720 f0624607a4e47de49ddddbd352a9c0f1 898 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 533 881 5.8E-88 T 14-09-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AY555_RS09720 f0624607a4e47de49ddddbd352a9c0f1 898 Gene3D G3DSA:1.20.80.30 115 201 1.4E-31 T 14-09-2016 AY555_RS09720 f0624607a4e47de49ddddbd352a9c0f1 898 PIRSF PIRSF000853 1 891 0.0 T 14-09-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AY555_RS09720 f0624607a4e47de49ddddbd352a9c0f1 898 Gene3D G3DSA:3.30.1490.20 203 246 3.7E-56 T 14-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AY555_RS09720 f0624607a4e47de49ddddbd352a9c0f1 898 Gene3D G3DSA:3.30.1490.20 3 114 3.7E-56 T 14-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AY555_RS09720 f0624607a4e47de49ddddbd352a9c0f1 898 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 3 882 0.0 T 14-09-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AY555_RS09720 f0624607a4e47de49ddddbd352a9c0f1 898 PANTHER PTHR22931:SF9 1 891 0.0 T 14-09-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AY555_RS09720 f0624607a4e47de49ddddbd352a9c0f1 898 SUPERFAMILY SSF56059 1 394 1.29E-145 T 14-09-2016 AY555_RS09720 f0624607a4e47de49ddddbd352a9c0f1 898 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 463 474 - T 14-09-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AY555_RS09720 f0624607a4e47de49ddddbd352a9c0f1 898 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 21 300 8.5E-51 T 14-09-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 AY555_RS09720 f0624607a4e47de49ddddbd352a9c0f1 898 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 315 371 4.7E-11 T 14-09-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 AY555_RS09720 f0624607a4e47de49ddddbd352a9c0f1 898 SUPERFAMILY SSF51621 524 882 4.17E-124 T 14-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AY555_RS09720 f0624607a4e47de49ddddbd352a9c0f1 898 PANTHER PTHR22931 1 891 0.0 T 14-09-2016 AY555_RS08855 2721d368737be1683d6d5ce51822e584 803 Gene3D G3DSA:3.40.50.300 310 499 4.8E-35 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08855 2721d368737be1683d6d5ce51822e584 803 Gene3D G3DSA:1.10.8.60 500 582 7.2E-31 T 14-09-2016 AY555_RS08855 2721d368737be1683d6d5ce51822e584 803 Gene3D G3DSA:3.30.230.10 590 769 1.9E-75 T 14-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AY555_RS08855 2721d368737be1683d6d5ce51822e584 803 SMART SM00464 9 201 1.9E-81 T 14-09-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 AY555_RS08855 2721d368737be1683d6d5ce51822e584 803 Hamap MF_01973 Lon protease [lon]. 10 770 72.28 T 14-09-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 AY555_RS08855 2721d368737be1683d6d5ce51822e584 803 TIGRFAM TIGR00763 lon: endopeptidase La 11 769 4.9E-302 T 14-09-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AY555_RS08855 2721d368737be1683d6d5ce51822e584 803 SMART SM00382 347 499 1.7E-11 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS08855 2721d368737be1683d6d5ce51822e584 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 593 609 5.5E-55 T 14-09-2016 AY555_RS08855 2721d368737be1683d6d5ce51822e584 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 355 374 5.5E-55 T 14-09-2016 AY555_RS08855 2721d368737be1683d6d5ce51822e584 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 724 742 5.5E-55 T 14-09-2016 AY555_RS08855 2721d368737be1683d6d5ce51822e584 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 701 720 5.5E-55 T 14-09-2016 AY555_RS08855 2721d368737be1683d6d5ce51822e584 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 671 690 5.5E-55 T 14-09-2016 AY555_RS08855 2721d368737be1683d6d5ce51822e584 803 PANTHER PTHR10046 8 774 0.0 T 14-09-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 AY555_RS08855 2721d368737be1683d6d5ce51822e584 803 SUPERFAMILY SSF54211 593 768 1.1E-59 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AY555_RS08855 2721d368737be1683d6d5ce51822e584 803 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 674 682 - T 14-09-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 AY555_RS08855 2721d368737be1683d6d5ce51822e584 803 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 351 487 3.4E-19 T 14-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AY555_RS08855 2721d368737be1683d6d5ce51822e584 803 SUPERFAMILY SSF88697 9 200 3.48E-50 T 14-09-2016 IPR015947 PUA-like domain AY555_RS08855 2721d368737be1683d6d5ce51822e584 803 SUPERFAMILY SSF52540 312 584 4.91E-54 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08855 2721d368737be1683d6d5ce51822e584 803 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 200 1.9E-42 T 14-09-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 AY555_RS08855 2721d368737be1683d6d5ce51822e584 803 PANTHER PTHR10046:SF43 8 774 0.0 T 14-09-2016 AY555_RS08855 2721d368737be1683d6d5ce51822e584 803 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 568 770 1.8E-98 T 14-09-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 AY555_RS08855 2721d368737be1683d6d5ce51822e584 803 PIRSF PIRSF001174 2 773 0.0 T 14-09-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AY555_RS01180 650134920439bee80aa2fdaeceb1c309 259 PRINTS PR01805 VacJ lipoprotein signature 138 155 3.8E-21 T 14-09-2016 IPR007428 MlaA lipoprotein GO:0016020 AY555_RS01180 650134920439bee80aa2fdaeceb1c309 259 PRINTS PR01805 VacJ lipoprotein signature 51 67 3.8E-21 T 14-09-2016 IPR007428 MlaA lipoprotein GO:0016020 AY555_RS01180 650134920439bee80aa2fdaeceb1c309 259 PRINTS PR01805 VacJ lipoprotein signature 102 119 3.8E-21 T 14-09-2016 IPR007428 MlaA lipoprotein GO:0016020 AY555_RS01180 650134920439bee80aa2fdaeceb1c309 259 PRINTS PR01805 VacJ lipoprotein signature 34 47 3.8E-21 T 14-09-2016 IPR007428 MlaA lipoprotein GO:0016020 AY555_RS01180 650134920439bee80aa2fdaeceb1c309 259 Pfam PF04333 MlaA lipoprotein 33 229 2.2E-69 T 14-09-2016 IPR007428 MlaA lipoprotein GO:0016020 AY555_RS01180 650134920439bee80aa2fdaeceb1c309 259 PANTHER PTHR30035 30 245 5.2E-51 T 14-09-2016 IPR007428 MlaA lipoprotein GO:0016020 AY555_RS08950 f89798cb66d0ebec602123ea0bceadc0 433 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 17 426 2.4E-232 T 14-09-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 AY555_RS08950 f89798cb66d0ebec602123ea0bceadc0 433 Gene3D G3DSA:1.10.230.10 285 378 6.5E-42 T 14-09-2016 IPR016143 Citrate synthase-like, small alpha subdomain AY555_RS08950 f89798cb66d0ebec602123ea0bceadc0 433 Pfam PF00285 Citrate synthase, C-terminal domain 50 416 1.9E-133 T 14-09-2016 IPR002020 Citrate synthase GO:0046912 AY555_RS08950 f89798cb66d0ebec602123ea0bceadc0 433 PANTHER PTHR11739 7 433 9.4E-200 T 14-09-2016 IPR002020 Citrate synthase GO:0046912 AY555_RS08950 f89798cb66d0ebec602123ea0bceadc0 433 PIRSF PIRSF001369 41 433 1.4E-166 T 14-09-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 AY555_RS08950 f89798cb66d0ebec602123ea0bceadc0 433 SUPERFAMILY SSF48256 10 433 4.19E-166 T 14-09-2016 IPR002020 Citrate synthase GO:0046912 AY555_RS08950 f89798cb66d0ebec602123ea0bceadc0 433 PANTHER PTHR11739:SF13 7 433 9.4E-200 T 14-09-2016 AY555_RS08950 f89798cb66d0ebec602123ea0bceadc0 433 Gene3D G3DSA:1.10.580.10 56 284 1.1E-98 T 14-09-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 AY555_RS08950 f89798cb66d0ebec602123ea0bceadc0 433 ProSitePatterns PS00480 Citrate synthase signature. 307 319 - T 14-09-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 AY555_RS08950 f89798cb66d0ebec602123ea0bceadc0 433 PRINTS PR00143 Citrate synthase signature 364 380 8.4E-55 T 14-09-2016 IPR002020 Citrate synthase GO:0046912 AY555_RS08950 f89798cb66d0ebec602123ea0bceadc0 433 PRINTS PR00143 Citrate synthase signature 384 398 8.4E-55 T 14-09-2016 IPR002020 Citrate synthase GO:0046912 AY555_RS08950 f89798cb66d0ebec602123ea0bceadc0 433 PRINTS PR00143 Citrate synthase signature 223 238 8.4E-55 T 14-09-2016 IPR002020 Citrate synthase GO:0046912 AY555_RS08950 f89798cb66d0ebec602123ea0bceadc0 433 PRINTS PR00143 Citrate synthase signature 300 320 8.4E-55 T 14-09-2016 IPR002020 Citrate synthase GO:0046912 AY555_RS08950 f89798cb66d0ebec602123ea0bceadc0 433 PRINTS PR00143 Citrate synthase signature 245 273 8.4E-55 T 14-09-2016 IPR002020 Citrate synthase GO:0046912 AY555_RS08950 f89798cb66d0ebec602123ea0bceadc0 433 PRINTS PR00143 Citrate synthase signature 169 182 8.4E-55 T 14-09-2016 IPR002020 Citrate synthase GO:0046912 AY555_RS08490 fd495338418ffea170b16eaed7b26cd5 412 SUPERFAMILY SSF51905 370 409 8.93E-37 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS08490 fd495338418ffea170b16eaed7b26cd5 412 SUPERFAMILY SSF51905 1 289 8.93E-37 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS08490 fd495338418ffea170b16eaed7b26cd5 412 TIGRFAM TIGR03467 HpnE: squalene-associated FAD-dependent desaturase 7 410 1.3E-90 T 14-09-2016 IPR017830 Squalene-associated FAD-dependent desaturase AY555_RS08490 fd495338418ffea170b16eaed7b26cd5 412 Gene3D G3DSA:3.40.50.720 363 410 6.3E-26 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS08490 fd495338418ffea170b16eaed7b26cd5 412 Gene3D G3DSA:3.40.50.720 5 82 6.3E-26 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS08490 fd495338418ffea170b16eaed7b26cd5 412 Gene3D G3DSA:3.40.50.720 192 277 6.3E-26 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS08490 fd495338418ffea170b16eaed7b26cd5 412 Pfam PF01593 Flavin containing amine oxidoreductase 207 409 2.3E-13 T 14-09-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 AY555_RS08490 fd495338418ffea170b16eaed7b26cd5 412 Pfam PF01593 Flavin containing amine oxidoreductase 14 86 6.8E-11 T 14-09-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 AY555_RS08490 fd495338418ffea170b16eaed7b26cd5 412 PANTHER PTHR10742 1 408 1.1E-14 T 14-09-2016 AY555_RS08750 1057b1b180524bc0960022e125776464 394 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 8 394 1.4E-179 T 14-09-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 AY555_RS08750 1057b1b180524bc0960022e125776464 394 SUPERFAMILY SSF56762 18 394 7.85E-141 T 14-09-2016 IPR029014 NiFe hydrogenase-like AY555_RS08750 1057b1b180524bc0960022e125776464 394 PANTHER PTHR11993:SF10 1 389 2.3E-241 T 14-09-2016 AY555_RS08750 1057b1b180524bc0960022e125776464 394 Gene3D G3DSA:1.10.645.10 7 386 2.2E-67 T 14-09-2016 IPR029014 NiFe hydrogenase-like AY555_RS08750 1057b1b180524bc0960022e125776464 394 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 1 394 49.323 T 14-09-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 AY555_RS08750 1057b1b180524bc0960022e125776464 394 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 45 56 - T 14-09-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 AY555_RS08750 1057b1b180524bc0960022e125776464 394 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 122 394 5.3E-125 T 14-09-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 AY555_RS08750 1057b1b180524bc0960022e125776464 394 PANTHER PTHR11993 1 389 2.3E-241 T 14-09-2016 AY555_RS00305 f369143030d6aa14cc9da4cbf1341cdd 988 Gene3D G3DSA:2.40.128.130 673 988 9.5E-56 T 14-09-2016 IPR005546 Autotransporter beta-domain AY555_RS00305 f369143030d6aa14cc9da4cbf1341cdd 988 SMART SM00869 711 978 1.2E-48 T 14-09-2016 IPR005546 Autotransporter beta-domain AY555_RS00305 f369143030d6aa14cc9da4cbf1341cdd 988 Pfam PF03797 Autotransporter beta-domain 711 977 4.7E-49 T 14-09-2016 IPR005546 Autotransporter beta-domain AY555_RS00305 f369143030d6aa14cc9da4cbf1341cdd 988 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 645 988 4.0E-30 T 14-09-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 AY555_RS00305 f369143030d6aa14cc9da4cbf1341cdd 988 SUPERFAMILY SSF103515 666 988 5.89E-56 T 14-09-2016 IPR005546 Autotransporter beta-domain AY555_RS05965 3e1049ecd711047b9f4f59f1a9dfdda4 300 PANTHER PTHR34138 9 271 5.2E-45 T 14-09-2016 AY555_RS05965 3e1049ecd711047b9f4f59f1a9dfdda4 300 PANTHER PTHR34138:SF1 9 271 5.2E-45 T 14-09-2016 AY555_RS05965 3e1049ecd711047b9f4f59f1a9dfdda4 300 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 24 273 8.4E-35 T 14-09-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 AY555_RS05965 3e1049ecd711047b9f4f59f1a9dfdda4 300 PIRSF PIRSF038471 15 279 1.9E-59 T 14-09-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 AY555_RS05965 3e1049ecd711047b9f4f59f1a9dfdda4 300 Pfam PF04085 rod shape-determining protein MreC 132 271 1.6E-30 T 14-09-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 AY555_RS01830 85be45ae5dfc9154f47862ab2ce3a3e5 319 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 14 306 8.3E-85 T 14-09-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 AY555_RS01830 85be45ae5dfc9154f47862ab2ce3a3e5 319 PANTHER PTHR30160:SF13 5 302 1.1E-58 T 14-09-2016 AY555_RS01830 85be45ae5dfc9154f47862ab2ce3a3e5 319 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 2 319 31.476 T 14-09-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 AY555_RS01830 85be45ae5dfc9154f47862ab2ce3a3e5 319 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 29 303 4.2E-54 T 14-09-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 AY555_RS01830 85be45ae5dfc9154f47862ab2ce3a3e5 319 PANTHER PTHR30160 5 302 1.1E-58 T 14-09-2016 AY555_RS02280 f3150ca5698bd5373ac37f27e5543d8b 515 SUPERFAMILY SSF54211 8 168 1.67E-27 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AY555_RS02280 f3150ca5698bd5373ac37f27e5543d8b 515 PANTHER PTHR32039:SF7 1 503 5.3E-224 T 14-09-2016 IPR004482 Mg chelatase-related protein AY555_RS02280 f3150ca5698bd5373ac37f27e5543d8b 515 Pfam PF13541 Subunit ChlI of Mg-chelatase 20 139 8.9E-39 T 14-09-2016 AY555_RS02280 f3150ca5698bd5373ac37f27e5543d8b 515 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 288 303 - T 14-09-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AY555_RS02280 f3150ca5698bd5373ac37f27e5543d8b 515 PANTHER PTHR32039 1 503 5.3E-224 T 14-09-2016 AY555_RS02280 f3150ca5698bd5373ac37f27e5543d8b 515 Gene3D G3DSA:3.40.50.300 187 387 3.9E-50 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS02280 f3150ca5698bd5373ac37f27e5543d8b 515 SUPERFAMILY SSF52540 187 501 1.52E-48 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS02280 f3150ca5698bd5373ac37f27e5543d8b 515 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 501 1.6E-27 T 14-09-2016 IPR025158 Mg chelatase-related protein, C-terminal domain AY555_RS02280 f3150ca5698bd5373ac37f27e5543d8b 515 Pfam PF01078 Magnesium chelatase, subunit ChlI 189 392 4.1E-94 T 14-09-2016 IPR000523 Magnesium chelatase ChlI domain AY555_RS02280 f3150ca5698bd5373ac37f27e5543d8b 515 Gene3D G3DSA:3.30.230.10 3 128 4.7E-24 T 14-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AY555_RS02280 f3150ca5698bd5373ac37f27e5543d8b 515 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 5 501 2.9E-160 T 14-09-2016 IPR004482 Mg chelatase-related protein AY555_RS02280 f3150ca5698bd5373ac37f27e5543d8b 515 SMART SM00382 209 391 8.5E-10 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS02670 e141fe82cf636665454a10b1a42c72a0 94 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 28.429 T 14-09-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 AY555_RS02670 e141fe82cf636665454a10b1a42c72a0 94 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 2.4E-43 T 14-09-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 AY555_RS02670 e141fe82cf636665454a10b1a42c72a0 94 Pfam PF00216 Bacterial DNA-binding protein 1 91 6.6E-31 T 14-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AY555_RS02670 e141fe82cf636665454a10b1a42c72a0 94 PANTHER PTHR33175 1 94 1.3E-40 T 14-09-2016 AY555_RS02670 e141fe82cf636665454a10b1a42c72a0 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 14-09-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AY555_RS02670 e141fe82cf636665454a10b1a42c72a0 94 Gene3D G3DSA:4.10.520.10 1 92 2.4E-33 T 14-09-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AY555_RS02670 e141fe82cf636665454a10b1a42c72a0 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 7.1E-17 T 14-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AY555_RS02670 e141fe82cf636665454a10b1a42c72a0 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 7.1E-17 T 14-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AY555_RS02670 e141fe82cf636665454a10b1a42c72a0 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 7.1E-17 T 14-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AY555_RS02670 e141fe82cf636665454a10b1a42c72a0 94 PANTHER PTHR33175:SF5 1 94 1.3E-40 T 14-09-2016 AY555_RS02670 e141fe82cf636665454a10b1a42c72a0 94 SMART SM00411 1 91 5.6E-42 T 14-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AY555_RS02670 e141fe82cf636665454a10b1a42c72a0 94 SUPERFAMILY SSF47729 1 91 1.34E-29 T 14-09-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AY555_RS04740 87de93a49d19122d5cfae902de57cd13 356 SMART SM00839 143 351 1.1E-63 T 14-09-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 AY555_RS04740 87de93a49d19122d5cfae902de57cd13 356 Gene3D G3DSA:3.40.192.10 1 149 1.7E-61 T 14-09-2016 AY555_RS04740 87de93a49d19122d5cfae902de57cd13 356 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 21 131 2.1E-25 T 14-09-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 AY555_RS04740 87de93a49d19122d5cfae902de57cd13 356 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 74 87 - T 14-09-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 AY555_RS04740 87de93a49d19122d5cfae902de57cd13 356 Gene3D G3DSA:3.40.50.720 150 335 6.4E-48 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS04740 87de93a49d19122d5cfae902de57cd13 356 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 66 80 2.6E-14 T 14-09-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 AY555_RS04740 87de93a49d19122d5cfae902de57cd13 356 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 285 296 2.6E-14 T 14-09-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 AY555_RS04740 87de93a49d19122d5cfae902de57cd13 356 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 175 195 2.6E-14 T 14-09-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 AY555_RS04740 87de93a49d19122d5cfae902de57cd13 356 PANTHER PTHR11606 1 356 5.1E-116 T 14-09-2016 AY555_RS04740 87de93a49d19122d5cfae902de57cd13 356 PIRSF PIRSF000188 1 353 6.7E-142 T 14-09-2016 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 AY555_RS04740 87de93a49d19122d5cfae902de57cd13 356 SUPERFAMILY SSF51735 141 346 4.18E-49 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS04740 87de93a49d19122d5cfae902de57cd13 356 PANTHER PTHR11606:SF3 1 356 5.1E-116 T 14-09-2016 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 AY555_RS04740 87de93a49d19122d5cfae902de57cd13 356 SUPERFAMILY SSF53223 4 140 1.86E-43 T 14-09-2016 AY555_RS04740 87de93a49d19122d5cfae902de57cd13 356 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 219 297 7.2E-10 T 14-09-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 AY555_RS09160 a397357951a688959180ad45a781dba8 882 PANTHER PTHR11390 1 678 0.0 T 14-09-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AY555_RS09160 a397357951a688959180ad45a781dba8 882 Gene3D G3DSA:3.40.50.140 1 136 2.8E-42 T 14-09-2016 IPR006171 Toprim domain AY555_RS09160 a397357951a688959180ad45a781dba8 882 Gene3D G3DSA:2.70.20.10 325 468 5.6E-36 T 14-09-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AY555_RS09160 a397357951a688959180ad45a781dba8 882 Gene3D G3DSA:2.70.20.10 187 321 2.2E-30 T 14-09-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AY555_RS09160 a397357951a688959180ad45a781dba8 882 PANTHER PTHR11390:SF27 1 678 0.0 T 14-09-2016 AY555_RS09160 a397357951a688959180ad45a781dba8 882 Pfam PF01751 Toprim domain 3 115 1.1E-23 T 14-09-2016 IPR006171 Toprim domain AY555_RS09160 a397357951a688959180ad45a781dba8 882 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 285 307 - T 14-09-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 AY555_RS09160 a397357951a688959180ad45a781dba8 882 SMART SM00437 248 522 9.0E-111 T 14-09-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AY555_RS09160 a397357951a688959180ad45a781dba8 882 Hamap MF_00952 DNA topoisomerase 1 [topA]. 1 733 52.787 T 14-09-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 AY555_RS09160 a397357951a688959180ad45a781dba8 882 Gene3D G3DSA:3.30.65.10 609 639 2.5E-9 T 14-09-2016 AY555_RS09160 a397357951a688959180ad45a781dba8 882 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 604 639 1.9E-12 T 14-09-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 AY555_RS09160 a397357951a688959180ad45a781dba8 882 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 376 392 7.5E-34 T 14-09-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AY555_RS09160 a397357951a688959180ad45a781dba8 882 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 75 88 7.5E-34 T 14-09-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AY555_RS09160 a397357951a688959180ad45a781dba8 882 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 164 182 7.5E-34 T 14-09-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AY555_RS09160 a397357951a688959180ad45a781dba8 882 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 298 307 7.5E-34 T 14-09-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AY555_RS09160 a397357951a688959180ad45a781dba8 882 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 485 499 7.5E-34 T 14-09-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AY555_RS09160 a397357951a688959180ad45a781dba8 882 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 4 638 3.9E-236 T 14-09-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 AY555_RS09160 a397357951a688959180ad45a781dba8 882 Gene3D G3DSA:1.10.460.10 469 608 1.0E-55 T 14-09-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AY555_RS09160 a397357951a688959180ad45a781dba8 882 Gene3D G3DSA:1.10.460.10 137 184 1.0E-55 T 14-09-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AY555_RS09160 a397357951a688959180ad45a781dba8 882 SUPERFAMILY SSF57783 604 640 1.43E-8 T 14-09-2016 AY555_RS09160 a397357951a688959180ad45a781dba8 882 Pfam PF13368 Topoisomerase C-terminal repeat 721 772 6.5E-16 T 14-09-2016 IPR025589 Topoisomerase C-terminal repeat AY555_RS09160 a397357951a688959180ad45a781dba8 882 Pfam PF13368 Topoisomerase C-terminal repeat 783 835 4.9E-21 T 14-09-2016 IPR025589 Topoisomerase C-terminal repeat AY555_RS09160 a397357951a688959180ad45a781dba8 882 Pfam PF13368 Topoisomerase C-terminal repeat 656 718 9.8E-13 T 14-09-2016 IPR025589 Topoisomerase C-terminal repeat AY555_RS09160 a397357951a688959180ad45a781dba8 882 Pfam PF01131 DNA topoisomerase 130 559 4.1E-123 T 14-09-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AY555_RS09160 a397357951a688959180ad45a781dba8 882 SUPERFAMILY SSF56712 1 573 5.1E-183 T 14-09-2016 IPR023405 DNA topoisomerase, type IA, core domain AY555_RS09160 a397357951a688959180ad45a781dba8 882 SUPERFAMILY SSF56712 604 612 5.1E-183 T 14-09-2016 IPR023405 DNA topoisomerase, type IA, core domain AY555_RS09160 a397357951a688959180ad45a781dba8 882 SMART SM00493 1 101 3.7E-28 T 14-09-2016 IPR006171 Toprim domain AY555_RS09160 a397357951a688959180ad45a781dba8 882 SMART SM00436 106 194 1.3E-44 T 14-09-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AY555_RS08740 2640955e66f9897db87e87536abdaac2 425 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 344 355 - T 14-09-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 AY555_RS08740 2640955e66f9897db87e87536abdaac2 425 PANTHER PTHR11780 2 421 1.6E-284 T 14-09-2016 AY555_RS08740 2640955e66f9897db87e87536abdaac2 425 SUPERFAMILY SSF142984 241 326 1.44E-25 T 14-09-2016 AY555_RS08740 2640955e66f9897db87e87536abdaac2 425 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 334 415 6.4E-30 T 14-09-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 AY555_RS08740 2640955e66f9897db87e87536abdaac2 425 Pfam PF10531 SLBB domain 243 293 6.0E-10 T 14-09-2016 IPR019554 Soluble ligand binding domain AY555_RS08740 2640955e66f9897db87e87536abdaac2 425 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 47 217 9.4E-52 T 14-09-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain AY555_RS08740 2640955e66f9897db87e87536abdaac2 425 SUPERFAMILY SSF142019 3 240 4.18E-87 T 14-09-2016 AY555_RS08740 2640955e66f9897db87e87536abdaac2 425 SMART SM00928 331 376 2.5E-24 T 14-09-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 AY555_RS08740 2640955e66f9897db87e87536abdaac2 425 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 167 182 - T 14-09-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 AY555_RS08740 2640955e66f9897db87e87536abdaac2 425 SUPERFAMILY SSF140490 327 419 5.49E-36 T 14-09-2016 AY555_RS08740 2640955e66f9897db87e87536abdaac2 425 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 8 416 3.4E-199 T 14-09-2016 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 AY555_RS06985 409b9f30590f968f6d811a782b6ce622 661 PANTHER PTHR10169 13 641 1.0E-197 T 14-09-2016 AY555_RS06985 409b9f30590f968f6d811a782b6ce622 661 PRINTS PR00418 DNA topoisomerase II family signature 521 538 4.1E-65 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS06985 409b9f30590f968f6d811a782b6ce622 661 PRINTS PR00418 DNA topoisomerase II family signature 288 301 4.1E-65 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS06985 409b9f30590f968f6d811a782b6ce622 661 PRINTS PR00418 DNA topoisomerase II family signature 541 553 4.1E-65 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS06985 409b9f30590f968f6d811a782b6ce622 661 PRINTS PR00418 DNA topoisomerase II family signature 123 137 4.1E-65 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS06985 409b9f30590f968f6d811a782b6ce622 661 PRINTS PR00418 DNA topoisomerase II family signature 44 59 4.1E-65 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS06985 409b9f30590f968f6d811a782b6ce622 661 PRINTS PR00418 DNA topoisomerase II family signature 437 451 4.1E-65 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS06985 409b9f30590f968f6d811a782b6ce622 661 PRINTS PR00418 DNA topoisomerase II family signature 503 519 4.1E-65 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS06985 409b9f30590f968f6d811a782b6ce622 661 PRINTS PR00418 DNA topoisomerase II family signature 79 92 4.1E-65 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS06985 409b9f30590f968f6d811a782b6ce622 661 PRINTS PR00418 DNA topoisomerase II family signature 584 600 4.1E-65 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS06985 409b9f30590f968f6d811a782b6ce622 661 SMART SM00387 40 186 6.5E-24 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS06985 409b9f30590f968f6d811a782b6ce622 661 ProSitePatterns PS00177 DNA topoisomerase II signature. 439 447 - T 14-09-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS06985 409b9f30590f968f6d811a782b6ce622 661 Gene3D G3DSA:3.40.50.670 421 641 3.4E-80 T 14-09-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS06985 409b9f30590f968f6d811a782b6ce622 661 SUPERFAMILY SSF55874 14 218 1.96E-58 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS06985 409b9f30590f968f6d811a782b6ce622 661 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 13 652 1.6E-233 T 14-09-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AY555_RS06985 409b9f30590f968f6d811a782b6ce622 661 SMART SM00433 44 654 4.7E-278 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS06985 409b9f30590f968f6d811a782b6ce622 661 PRINTS PR01159 DNA gyrase subunit B signature 392 412 3.6E-12 T 14-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS06985 409b9f30590f968f6d811a782b6ce622 661 PRINTS PR01159 DNA gyrase subunit B signature 330 346 3.6E-12 T 14-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS06985 409b9f30590f968f6d811a782b6ce622 661 PRINTS PR01159 DNA gyrase subunit B signature 487 496 3.6E-12 T 14-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS06985 409b9f30590f968f6d811a782b6ce622 661 PRINTS PR01159 DNA gyrase subunit B signature 378 392 3.6E-12 T 14-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS06985 409b9f30590f968f6d811a782b6ce622 661 PRINTS PR01159 DNA gyrase subunit B signature 605 617 3.6E-12 T 14-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS06985 409b9f30590f968f6d811a782b6ce622 661 PRINTS PR01159 DNA gyrase subunit B signature 15 25 3.6E-12 T 14-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS06985 409b9f30590f968f6d811a782b6ce622 661 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 12 658 42.025 T 14-09-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AY555_RS06985 409b9f30590f968f6d811a782b6ce622 661 SUPERFAMILY SSF54211 240 409 7.4E-41 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AY555_RS06985 409b9f30590f968f6d811a782b6ce622 661 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 40 185 5.4E-19 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS06985 409b9f30590f968f6d811a782b6ce622 661 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 580 650 6.1E-23 T 14-09-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS06985 409b9f30590f968f6d811a782b6ce622 661 Gene3D G3DSA:3.30.565.10 15 216 3.5E-74 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS06985 409b9f30590f968f6d811a782b6ce622 661 Pfam PF00204 DNA gyrase B 240 408 1.8E-42 T 14-09-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS06985 409b9f30590f968f6d811a782b6ce622 661 Gene3D G3DSA:3.30.230.10 239 409 1.9E-42 T 14-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AY555_RS06985 409b9f30590f968f6d811a782b6ce622 661 SUPERFAMILY SSF56719 411 652 6.28E-77 T 14-09-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 AY555_RS06985 409b9f30590f968f6d811a782b6ce622 661 PANTHER PTHR10169:SF45 13 641 1.0E-197 T 14-09-2016 AY555_RS06985 409b9f30590f968f6d811a782b6ce622 661 Pfam PF01751 Toprim domain 436 544 9.7E-18 T 14-09-2016 IPR006171 Toprim domain AY555_RS01025 2fd33a233077e074982b0022db2c1d92 176 PANTHER PTHR30265 1 176 1.4E-70 T 14-09-2016 AY555_RS01025 2fd33a233077e074982b0022db2c1d92 176 Gene3D G3DSA:2.30.30.30 115 176 1.3E-29 T 14-09-2016 IPR014722 Ribosomal protein L2 domain 2 AY555_RS01025 2fd33a233077e074982b0022db2c1d92 176 SUPERFAMILY SSF82679 3 112 5.89E-38 T 14-09-2016 IPR006645 NusG, N-terminal GO:0006355 AY555_RS01025 2fd33a233077e074982b0022db2c1d92 176 Pfam PF02357 Transcription termination factor nusG 4 106 1.9E-28 T 14-09-2016 IPR006645 NusG, N-terminal GO:0006355 AY555_RS01025 2fd33a233077e074982b0022db2c1d92 176 SMART SM00738 2 110 5.9E-50 T 14-09-2016 IPR006645 NusG, N-terminal GO:0006355 AY555_RS01025 2fd33a233077e074982b0022db2c1d92 176 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 176 1.5E-70 T 14-09-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 AY555_RS01025 2fd33a233077e074982b0022db2c1d92 176 SUPERFAMILY SSF50104 121 176 9.03E-19 T 14-09-2016 IPR008991 Translation protein SH3-like domain AY555_RS01025 2fd33a233077e074982b0022db2c1d92 176 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 176 25.769 T 14-09-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 AY555_RS01025 2fd33a233077e074982b0022db2c1d92 176 PRINTS PR00338 Transcription termination factor NUSG signature 134 149 1.1E-19 T 14-09-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 AY555_RS01025 2fd33a233077e074982b0022db2c1d92 176 PRINTS PR00338 Transcription termination factor NUSG signature 152 168 1.1E-19 T 14-09-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 AY555_RS01025 2fd33a233077e074982b0022db2c1d92 176 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 1.1E-19 T 14-09-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 AY555_RS01025 2fd33a233077e074982b0022db2c1d92 176 Gene3D G3DSA:3.30.70.940 3 112 6.9E-43 T 14-09-2016 IPR006645 NusG, N-terminal GO:0006355 AY555_RS01025 2fd33a233077e074982b0022db2c1d92 176 Pfam PF00467 KOW motif 125 155 1.2E-5 T 14-09-2016 IPR005824 KOW AY555_RS01025 2fd33a233077e074982b0022db2c1d92 176 ProSitePatterns PS01014 Transcription termination factor nusG signature. 159 168 - T 14-09-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site AY555_RS01025 2fd33a233077e074982b0022db2c1d92 176 SMART SM00739 122 149 7.9E-5 T 14-09-2016 IPR005824 KOW AY555_RS01870 fe6ace82874b13a3e7e8ed5ff329e62d 586 Pfam PF00849 RNA pseudouridylate synthase 130 259 2.0E-12 T 14-09-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AY555_RS01870 fe6ace82874b13a3e7e8ed5ff329e62d 586 PANTHER PTHR21600:SF2 35 288 2.6E-72 T 14-09-2016 AY555_RS01870 fe6ace82874b13a3e7e8ed5ff329e62d 586 PANTHER PTHR21600 35 288 2.6E-72 T 14-09-2016 AY555_RS01870 fe6ace82874b13a3e7e8ed5ff329e62d 586 PANTHER PTHR21600 336 418 2.6E-72 T 14-09-2016 AY555_RS01870 fe6ace82874b13a3e7e8ed5ff329e62d 586 SMART SM00363 66 125 1.0E-9 T 14-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 AY555_RS01870 fe6ace82874b13a3e7e8ed5ff329e62d 586 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 131 287 1.0E-43 T 14-09-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AY555_RS01870 fe6ace82874b13a3e7e8ed5ff329e62d 586 SUPERFAMILY SSF55120 126 287 7.2E-38 T 14-09-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AY555_RS01870 fe6ace82874b13a3e7e8ed5ff329e62d 586 PANTHER PTHR21600:SF2 336 418 2.6E-72 T 14-09-2016 AY555_RS01870 fe6ace82874b13a3e7e8ed5ff329e62d 586 SUPERFAMILY SSF55174 62 119 4.71E-12 T 14-09-2016 AY555_RS01870 fe6ace82874b13a3e7e8ed5ff329e62d 586 Gene3D G3DSA:3.10.290.10 64 126 1.6E-19 T 14-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 AY555_RS01870 fe6ace82874b13a3e7e8ed5ff329e62d 586 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 164 178 - T 14-09-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AY555_RS01870 fe6ace82874b13a3e7e8ed5ff329e62d 586 Pfam PF01479 S4 domain 67 112 6.1E-10 T 14-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 AY555_RS01315 f2773bc49c0f00a3c7c1759897af7802 315 PANTHER PTHR22912:SF48 2 310 7.8E-156 T 14-09-2016 AY555_RS01315 f2773bc49c0f00a3c7c1759897af7802 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 1.3E-38 T 14-09-2016 AY555_RS01315 f2773bc49c0f00a3c7c1759897af7802 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 1.3E-38 T 14-09-2016 AY555_RS01315 f2773bc49c0f00a3c7c1759897af7802 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 284 1.3E-38 T 14-09-2016 AY555_RS01315 f2773bc49c0f00a3c7c1759897af7802 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.3E-38 T 14-09-2016 AY555_RS01315 f2773bc49c0f00a3c7c1759897af7802 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 1.3E-38 T 14-09-2016 AY555_RS01315 f2773bc49c0f00a3c7c1759897af7802 315 PANTHER PTHR22912 2 310 7.8E-156 T 14-09-2016 AY555_RS01315 f2773bc49c0f00a3c7c1759897af7802 315 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 298 3.4E-50 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS01315 f2773bc49c0f00a3c7c1759897af7802 315 SUPERFAMILY SSF51905 1 309 6.48E-57 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS01315 f2773bc49c0f00a3c7c1759897af7802 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 1.1E-75 T 14-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AY555_RS01315 f2773bc49c0f00a3c7c1759897af7802 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 40 55 1.1E-75 T 14-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AY555_RS01315 f2773bc49c0f00a3c7c1759897af7802 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 61 71 1.1E-75 T 14-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AY555_RS01315 f2773bc49c0f00a3c7c1759897af7802 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 1.1E-75 T 14-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AY555_RS01315 f2773bc49c0f00a3c7c1759897af7802 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 1.1E-75 T 14-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AY555_RS01315 f2773bc49c0f00a3c7c1759897af7802 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 237 258 1.1E-75 T 14-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AY555_RS01315 f2773bc49c0f00a3c7c1759897af7802 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 1.1E-75 T 14-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AY555_RS01315 f2773bc49c0f00a3c7c1759897af7802 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 196 212 1.1E-75 T 14-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AY555_RS01315 f2773bc49c0f00a3c7c1759897af7802 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 272 290 1.1E-75 T 14-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AY555_RS01315 f2773bc49c0f00a3c7c1759897af7802 315 Gene3D G3DSA:3.50.50.60 233 309 1.7E-13 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS01315 f2773bc49c0f00a3c7c1759897af7802 315 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 14-09-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AY555_RS01315 f2773bc49c0f00a3c7c1759897af7802 315 Gene3D G3DSA:3.50.50.60 3 119 9.1E-32 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS01315 f2773bc49c0f00a3c7c1759897af7802 315 Gene3D G3DSA:3.50.50.60 120 232 2.8E-37 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS01315 f2773bc49c0f00a3c7c1759897af7802 315 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 7 309 2.5E-121 T 14-09-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 AY555_RS04865 08d40daf8cb66149fd8ed72a4ea09e1a 328 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 249 5.0E-40 T 14-09-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AY555_RS04865 08d40daf8cb66149fd8ed72a4ea09e1a 328 PANTHER PTHR10366:SF469 1 328 8.4E-96 T 14-09-2016 AY555_RS04865 08d40daf8cb66149fd8ed72a4ea09e1a 328 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 3 322 2.2E-119 T 14-09-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 AY555_RS04865 08d40daf8cb66149fd8ed72a4ea09e1a 328 Gene3D G3DSA:3.40.50.720 3 177 1.1E-21 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS04865 08d40daf8cb66149fd8ed72a4ea09e1a 328 Gene3D G3DSA:3.90.25.10 178 305 3.7E-29 T 14-09-2016 AY555_RS04865 08d40daf8cb66149fd8ed72a4ea09e1a 328 SUPERFAMILY SSF51735 3 323 3.23E-59 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS04865 08d40daf8cb66149fd8ed72a4ea09e1a 328 PANTHER PTHR10366 1 328 8.4E-96 T 14-09-2016 AY555_RS02275 2ee76e898a3428957f04678e4572dea5 280 Gene3D G3DSA:3.30.1330.60 173 276 1.3E-28 T 14-09-2016 IPR006665 OmpA-like domain AY555_RS02275 2ee76e898a3428957f04678e4572dea5 280 PANTHER PTHR30128 174 276 1.1E-21 T 14-09-2016 AY555_RS02275 2ee76e898a3428957f04678e4572dea5 280 Pfam PF00691 OmpA family 176 270 9.3E-20 T 14-09-2016 IPR006665 OmpA-like domain AY555_RS02275 2ee76e898a3428957f04678e4572dea5 280 PRINTS PR01021 OMPA domain signature 221 237 3.4E-6 T 14-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AY555_RS02275 2ee76e898a3428957f04678e4572dea5 280 PRINTS PR01021 OMPA domain signature 206 221 3.4E-6 T 14-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AY555_RS02275 2ee76e898a3428957f04678e4572dea5 280 SUPERFAMILY SSF103088 172 276 6.93E-28 T 14-09-2016 IPR006665 OmpA-like domain AY555_RS03535 bcef8c55978981c63b1b47495e7b17c5 199 Gene3D G3DSA:1.20.1200.10 16 188 3.1E-62 T 14-09-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AY555_RS03535 bcef8c55978981c63b1b47495e7b17c5 199 PANTHER PTHR12213 7 199 1.3E-71 T 14-09-2016 AY555_RS03535 bcef8c55978981c63b1b47495e7b17c5 199 PANTHER PTHR12213:SF0 7 199 1.3E-71 T 14-09-2016 AY555_RS03535 bcef8c55978981c63b1b47495e7b17c5 199 SUPERFAMILY SSF89028 7 185 7.26E-59 T 14-09-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AY555_RS03535 bcef8c55978981c63b1b47495e7b17c5 199 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 8 184 3.2E-56 T 14-09-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 AY555_RS03535 bcef8c55978981c63b1b47495e7b17c5 199 Pfam PF01923 Cobalamin adenosyltransferase 7 173 2.3E-58 T 14-09-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AY555_RS03535 bcef8c55978981c63b1b47495e7b17c5 199 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 13 184 1.0E-50 T 14-09-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 AY555_RS07470 e02355dd0e21e275d710395848f6b3bb 245 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 236 32.398 T 14-09-2016 IPR002876 Transcriptional regulator TACO1-like AY555_RS07470 e02355dd0e21e275d710395848f6b3bb 245 Gene3D G3DSA:3.30.70.980 134 200 7.5E-21 T 14-09-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 AY555_RS07470 e02355dd0e21e275d710395848f6b3bb 245 Gene3D G3DSA:1.10.10.200 1 79 2.6E-35 T 14-09-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like AY555_RS07470 e02355dd0e21e275d710395848f6b3bb 245 Pfam PF01709 Transcriptional regulator 5 233 8.7E-88 T 14-09-2016 IPR002876 Transcriptional regulator TACO1-like AY555_RS07470 e02355dd0e21e275d710395848f6b3bb 245 SUPERFAMILY SSF75625 3 242 1.18E-87 T 14-09-2016 IPR029072 YebC-like AY555_RS07470 e02355dd0e21e275d710395848f6b3bb 245 Gene3D G3DSA:3.30.1270.10 209 243 9.8E-33 T 14-09-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 AY555_RS07470 e02355dd0e21e275d710395848f6b3bb 245 Gene3D G3DSA:3.30.1270.10 82 133 9.8E-33 T 14-09-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 AY555_RS07470 e02355dd0e21e275d710395848f6b3bb 245 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 233 2.8E-88 T 14-09-2016 IPR002876 Transcriptional regulator TACO1-like AY555_RS07470 e02355dd0e21e275d710395848f6b3bb 245 PANTHER PTHR12532 1 238 2.6E-102 T 14-09-2016 IPR002876 Transcriptional regulator TACO1-like AY555_RS05585 3df5c846b529bfb6527a6ec3964a9208 211 SUPERFAMILY SSF51306 122 208 1.34E-8 T 14-09-2016 IPR015927 Peptidase S24/S26A/S26B/S26C AY555_RS05585 3df5c846b529bfb6527a6ec3964a9208 211 Gene3D G3DSA:2.10.109.10 123 186 7.4E-6 T 14-09-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain AY555_RS05585 3df5c846b529bfb6527a6ec3964a9208 211 Pfam PF00717 Peptidase S24-like 130 166 1.6E-4 T 14-09-2016 IPR019759 Peptidase S24/S26A/S26B AY555_RS05585 3df5c846b529bfb6527a6ec3964a9208 211 Gene3D G3DSA:1.10.260.40 6 74 1.1E-7 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AY555_RS07955 f850b23f6fda23737ff96280c4b35380 1166 Gene3D G3DSA:3.40.920.10 733 928 1.6E-15 T 14-09-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 AY555_RS07955 f850b23f6fda23737ff96280c4b35380 1166 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 465 612 7.7E-7 T 14-09-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AY555_RS07955 f850b23f6fda23737ff96280c4b35380 1166 SUPERFAMILY SSF52518 30 212 8.48E-15 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AY555_RS07955 f850b23f6fda23737ff96280c4b35380 1166 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 741 928 1.1E-23 T 14-09-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 AY555_RS07955 f850b23f6fda23737ff96280c4b35380 1166 PANTHER PTHR18968 373 769 1.7E-167 T 14-09-2016 AY555_RS07955 f850b23f6fda23737ff96280c4b35380 1166 PANTHER PTHR18968:SF134 373 769 1.7E-167 T 14-09-2016 AY555_RS07955 f850b23f6fda23737ff96280c4b35380 1166 SUPERFAMILY SSF53323 732 974 2.22E-25 T 14-09-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 AY555_RS07955 f850b23f6fda23737ff96280c4b35380 1166 Gene3D G3DSA:3.40.50.970 500 625 2.3E-6 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AY555_RS07955 f850b23f6fda23737ff96280c4b35380 1166 SUPERFAMILY SSF52518 444 624 1.01E-12 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AY555_RS09685 9c2bed58baf535d1653389d77ec07a39 586 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 506 2.9E-115 T 14-09-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 AY555_RS09685 9c2bed58baf535d1653389d77ec07a39 586 PANTHER PTHR11772:SF10 418 577 1.1E-128 T 14-09-2016 AY555_RS09685 9c2bed58baf535d1653389d77ec07a39 586 PANTHER PTHR11772:SF10 2 380 1.1E-128 T 14-09-2016 AY555_RS09685 9c2bed58baf535d1653389d77ec07a39 586 SUPERFAMILY SSF56235 1 210 1.63E-51 T 14-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AY555_RS09685 9c2bed58baf535d1653389d77ec07a39 586 Gene3D G3DSA:3.40.50.620 228 566 4.3E-76 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS09685 9c2bed58baf535d1653389d77ec07a39 586 PANTHER PTHR11772 2 380 1.1E-128 T 14-09-2016 AY555_RS09685 9c2bed58baf535d1653389d77ec07a39 586 PANTHER PTHR11772 418 577 1.1E-128 T 14-09-2016 AY555_RS09685 9c2bed58baf535d1653389d77ec07a39 586 Gene3D G3DSA:3.60.20.10 1 210 2.0E-56 T 14-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AY555_RS09685 9c2bed58baf535d1653389d77ec07a39 586 Pfam PF00733 Asparagine synthase 237 566 8.3E-81 T 14-09-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 AY555_RS09685 9c2bed58baf535d1653389d77ec07a39 586 Pfam PF13537 Glutamine amidotransferase domain 46 161 5.7E-33 T 14-09-2016 IPR017932 Glutamine amidotransferase type 2 domain AY555_RS09685 9c2bed58baf535d1653389d77ec07a39 586 SUPERFAMILY SSF52402 229 378 3.49E-69 T 14-09-2016 AY555_RS09685 9c2bed58baf535d1653389d77ec07a39 586 SUPERFAMILY SSF52402 426 523 3.49E-69 T 14-09-2016 AY555_RS09685 9c2bed58baf535d1653389d77ec07a39 586 PIRSF PIRSF001589 1 581 3.5E-163 T 14-09-2016 AY555_RS11400 6b43ec8900c2db0f4a2e2ebb56283a7b 313 Pfam PF00890 FAD binding domain 2 155 3.5E-34 T 14-09-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain AY555_RS11400 6b43ec8900c2db0f4a2e2ebb56283a7b 313 Gene3D G3DSA:1.20.58.100 201 279 2.1E-15 T 14-09-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 AY555_RS11400 6b43ec8900c2db0f4a2e2ebb56283a7b 313 SUPERFAMILY SSF46977 202 279 1.31E-19 T 14-09-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 AY555_RS11400 6b43ec8900c2db0f4a2e2ebb56283a7b 313 Gene3D G3DSA:3.50.50.60 1 8 1.3E-28 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS11400 6b43ec8900c2db0f4a2e2ebb56283a7b 313 Gene3D G3DSA:3.50.50.60 112 170 1.3E-28 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS11400 6b43ec8900c2db0f4a2e2ebb56283a7b 313 PANTHER PTHR11632 1 294 3.6E-89 T 14-09-2016 AY555_RS11400 6b43ec8900c2db0f4a2e2ebb56283a7b 313 PANTHER PTHR11632:SF27 1 294 3.6E-89 T 14-09-2016 AY555_RS11400 6b43ec8900c2db0f4a2e2ebb56283a7b 313 SUPERFAMILY SSF56425 3 115 1.94E-30 T 14-09-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain AY555_RS11400 6b43ec8900c2db0f4a2e2ebb56283a7b 313 Pfam PF02910 Fumarate reductase flavoprotein C-term 241 278 4.3E-10 T 14-09-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 AY555_RS11400 6b43ec8900c2db0f4a2e2ebb56283a7b 313 Gene3D G3DSA:3.90.700.10 9 111 2.5E-28 T 14-09-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain AY555_RS11400 6b43ec8900c2db0f4a2e2ebb56283a7b 313 SUPERFAMILY SSF51905 2 11 1.93E-16 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS11400 6b43ec8900c2db0f4a2e2ebb56283a7b 313 SUPERFAMILY SSF51905 114 173 1.93E-16 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS04200 28d989102a9d200faebc87e72daed9c6 462 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 1 446 67.078 T 14-09-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 AY555_RS04200 28d989102a9d200faebc87e72daed9c6 462 Gene3D G3DSA:3.80.30.20 152 385 1.1E-73 T 14-09-2016 IPR023404 Radical SAM, alpha/beta horseshoe AY555_RS04200 28d989102a9d200faebc87e72daed9c6 462 Pfam PF01938 TRAM domain 385 440 4.6E-6 T 14-09-2016 IPR002792 TRAM domain AY555_RS04200 28d989102a9d200faebc87e72daed9c6 462 SUPERFAMILY SSF102114 132 378 3.27E-57 T 14-09-2016 AY555_RS04200 28d989102a9d200faebc87e72daed9c6 462 PANTHER PTHR11918:SF43 1 449 2.6E-165 T 14-09-2016 AY555_RS04200 28d989102a9d200faebc87e72daed9c6 462 Pfam PF04055 Radical SAM superfamily 158 332 2.3E-26 T 14-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AY555_RS04200 28d989102a9d200faebc87e72daed9c6 462 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 1 442 2.5E-135 T 14-09-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 AY555_RS04200 28d989102a9d200faebc87e72daed9c6 462 Pfam PF00919 Uncharacterized protein family UPF0004 1 94 5.4E-23 T 14-09-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 AY555_RS04200 28d989102a9d200faebc87e72daed9c6 462 SMART SM00729 153 374 4.1E-59 T 14-09-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AY555_RS04200 28d989102a9d200faebc87e72daed9c6 462 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 157 177 - T 14-09-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 AY555_RS04200 28d989102a9d200faebc87e72daed9c6 462 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 1 442 8.9E-132 T 14-09-2016 AY555_RS04200 28d989102a9d200faebc87e72daed9c6 462 PANTHER PTHR11918 1 449 2.6E-165 T 14-09-2016 IPR023970 Methylthiotransferase/radical SAM-type protein AY555_RS01510 d1d9971b382fec7f7f8f979f2ef8d14c 370 Pfam PF13416 Bacterial extracellular solute-binding protein 47 323 2.6E-33 T 14-09-2016 AY555_RS01510 d1d9971b382fec7f7f8f979f2ef8d14c 370 Gene3D G3DSA:3.40.190.10 150 318 3.0E-66 T 14-09-2016 AY555_RS01510 d1d9971b382fec7f7f8f979f2ef8d14c 370 PANTHER PTHR30222 15 369 1.9E-141 T 14-09-2016 AY555_RS01510 d1d9971b382fec7f7f8f979f2ef8d14c 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 36 52 1.4E-51 T 14-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AY555_RS01510 d1d9971b382fec7f7f8f979f2ef8d14c 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 314 340 1.4E-51 T 14-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AY555_RS01510 d1d9971b382fec7f7f8f979f2ef8d14c 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 95 108 1.4E-51 T 14-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AY555_RS01510 d1d9971b382fec7f7f8f979f2ef8d14c 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 79 93 1.4E-51 T 14-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AY555_RS01510 d1d9971b382fec7f7f8f979f2ef8d14c 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 219 238 1.4E-51 T 14-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AY555_RS01510 d1d9971b382fec7f7f8f979f2ef8d14c 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 269 288 1.4E-51 T 14-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AY555_RS01510 d1d9971b382fec7f7f8f979f2ef8d14c 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 128 144 1.4E-51 T 14-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AY555_RS01510 d1d9971b382fec7f7f8f979f2ef8d14c 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 159 173 1.4E-51 T 14-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AY555_RS01510 d1d9971b382fec7f7f8f979f2ef8d14c 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 52 73 1.4E-51 T 14-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AY555_RS01510 d1d9971b382fec7f7f8f979f2ef8d14c 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 182 201 1.4E-51 T 14-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AY555_RS01510 d1d9971b382fec7f7f8f979f2ef8d14c 370 PANTHER PTHR30222:SF11 15 369 1.9E-141 T 14-09-2016 AY555_RS01510 d1d9971b382fec7f7f8f979f2ef8d14c 370 PIRSF PIRSF019574 1 370 6.1E-124 T 14-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AY555_RS01510 d1d9971b382fec7f7f8f979f2ef8d14c 370 Gene3D G3DSA:3.40.190.10 28 149 2.7E-9 T 14-09-2016 AY555_RS01510 d1d9971b382fec7f7f8f979f2ef8d14c 370 SUPERFAMILY SSF53850 30 369 5.6E-97 T 14-09-2016 AY555_RS00455 05e965019089bc1a63487e92429e0e10 258 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 11 257 1.6E-78 T 14-09-2016 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 AY555_RS00455 05e965019089bc1a63487e92429e0e10 258 PANTHER PTHR20854:SF5 1 256 7.1E-68 T 14-09-2016 AY555_RS00455 05e965019089bc1a63487e92429e0e10 258 Gene3D G3DSA:3.40.190.80 159 256 5.3E-35 T 14-09-2016 AY555_RS00455 05e965019089bc1a63487e92429e0e10 258 Pfam PF00459 Inositol monophosphatase family 15 246 4.1E-49 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AY555_RS00455 05e965019089bc1a63487e92429e0e10 258 SUPERFAMILY SSF56655 12 254 2.62E-68 T 14-09-2016 AY555_RS00455 05e965019089bc1a63487e92429e0e10 258 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 217 231 - T 14-09-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 AY555_RS00455 05e965019089bc1a63487e92429e0e10 258 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 88 101 - T 14-09-2016 IPR020583 Inositol monophosphatase, metal-binding site AY555_RS00455 05e965019089bc1a63487e92429e0e10 258 PRINTS PR00377 Inositol monophosphatase superfamily signature 88 104 8.9E-13 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AY555_RS00455 05e965019089bc1a63487e92429e0e10 258 PRINTS PR00377 Inositol monophosphatase superfamily signature 214 238 8.9E-13 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AY555_RS00455 05e965019089bc1a63487e92429e0e10 258 PRINTS PR00377 Inositol monophosphatase superfamily signature 64 80 8.9E-13 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AY555_RS00455 05e965019089bc1a63487e92429e0e10 258 PRINTS PR00377 Inositol monophosphatase superfamily signature 42 62 8.9E-13 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AY555_RS00455 05e965019089bc1a63487e92429e0e10 258 PANTHER PTHR20854 1 256 7.1E-68 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AY555_RS00455 05e965019089bc1a63487e92429e0e10 258 Gene3D G3DSA:3.30.540.10 12 156 4.4E-38 T 14-09-2016 AY555_RS09935 bae3bdb6fb18f7bcc5c078d3cbf97cce 262 SUPERFAMILY SSF53850 29 245 1.58E-29 T 14-09-2016 AY555_RS09935 bae3bdb6fb18f7bcc5c078d3cbf97cce 262 Gene3D G3DSA:3.40.190.10 20 143 1.7E-8 T 14-09-2016 AY555_RS09935 bae3bdb6fb18f7bcc5c078d3cbf97cce 262 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 245 1.2E-17 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AY555_RS09935 bae3bdb6fb18f7bcc5c078d3cbf97cce 262 SMART SM00062 31 251 0.004 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AY555_RS07765 001f761934e07b4d7b7fb42d5d910319 309 Gene3D G3DSA:3.30.479.20 247 288 2.2E-22 T 14-09-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 AY555_RS07765 001f761934e07b4d7b7fb42d5d910319 309 Gene3D G3DSA:3.30.479.20 152 198 2.2E-22 T 14-09-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 AY555_RS07765 001f761934e07b4d7b7fb42d5d910319 309 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 14-09-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 AY555_RS07765 001f761934e07b4d7b7fb42d5d910319 309 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 14-09-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 AY555_RS07765 001f761934e07b4d7b7fb42d5d910319 309 PANTHER PTHR11741 1 309 4.6E-145 T 14-09-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 AY555_RS07765 001f761934e07b4d7b7fb42d5d910319 309 Gene3D G3DSA:3.30.479.20 57 151 2.9E-16 T 14-09-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 AY555_RS07765 001f761934e07b4d7b7fb42d5d910319 309 Pfam PF00889 Elongation factor TS 71 289 2.1E-66 T 14-09-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 AY555_RS07765 001f761934e07b4d7b7fb42d5d910319 309 SUPERFAMILY SSF54713 150 307 2.75E-44 T 14-09-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 AY555_RS07765 001f761934e07b4d7b7fb42d5d910319 309 SUPERFAMILY SSF54713 56 145 1.05E-18 T 14-09-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 AY555_RS07765 001f761934e07b4d7b7fb42d5d910319 309 SUPERFAMILY SSF46934 4 55 3.48E-19 T 14-09-2016 IPR009060 UBA-like GO:0005515 AY555_RS07765 001f761934e07b4d7b7fb42d5d910319 309 Gene3D G3DSA:1.10.8.10 2 55 7.2E-28 T 14-09-2016 AY555_RS07765 001f761934e07b4d7b7fb42d5d910319 309 Hamap MF_00050 Elongation factor Ts [tsf]. 1 306 75.763 T 14-09-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 AY555_RS07765 001f761934e07b4d7b7fb42d5d910319 309 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 305 2.7E-91 T 14-09-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 AY555_RS07765 001f761934e07b4d7b7fb42d5d910319 309 Gene3D G3DSA:1.10.286.20 204 246 3.9E-17 T 14-09-2016 AY555_RS03975 b9c4b4bac79ccc826bd4d09e0c852bee 62 Pfam PF01206 Sulfurtransferase TusA 8 59 2.7E-12 T 14-09-2016 IPR001455 TusA-like domain AY555_RS03975 b9c4b4bac79ccc826bd4d09e0c852bee 62 Gene3D G3DSA:3.30.110.40 3 61 2.4E-12 T 14-09-2016 IPR001455 TusA-like domain AY555_RS03975 b9c4b4bac79ccc826bd4d09e0c852bee 62 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 10 34 - T 14-09-2016 IPR001455 TusA-like domain AY555_RS03975 b9c4b4bac79ccc826bd4d09e0c852bee 62 SUPERFAMILY SSF64307 3 61 1.29E-11 T 14-09-2016 IPR001455 TusA-like domain AY555_RS08525 7d98dadc193a5b3412526d8d6600969b 590 SUPERFAMILY SSF47323 453 590 7.85E-30 T 14-09-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS08525 7d98dadc193a5b3412526d8d6600969b 590 Pfam PF00750 tRNA synthetases class I (R) 122 182 4.0E-11 T 14-09-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AY555_RS08525 7d98dadc193a5b3412526d8d6600969b 590 PRINTS PR01038 Arginyl-tRNA synthetase signature 123 138 5.7E-23 T 14-09-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AY555_RS08525 7d98dadc193a5b3412526d8d6600969b 590 PRINTS PR01038 Arginyl-tRNA synthetase signature 138 154 5.7E-23 T 14-09-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AY555_RS08525 7d98dadc193a5b3412526d8d6600969b 590 PRINTS PR01038 Arginyl-tRNA synthetase signature 328 349 5.7E-23 T 14-09-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AY555_RS08525 7d98dadc193a5b3412526d8d6600969b 590 PRINTS PR01038 Arginyl-tRNA synthetase signature 162 175 5.7E-23 T 14-09-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AY555_RS08525 7d98dadc193a5b3412526d8d6600969b 590 SMART SM01016 5 94 2.7E-27 T 14-09-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AY555_RS08525 7d98dadc193a5b3412526d8d6600969b 590 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 36 590 6.0E-104 T 14-09-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AY555_RS08525 7d98dadc193a5b3412526d8d6600969b 590 PANTHER PTHR11956:SF6 326 590 4.5E-166 T 14-09-2016 AY555_RS08525 7d98dadc193a5b3412526d8d6600969b 590 PANTHER PTHR11956:SF6 1 310 4.5E-166 T 14-09-2016 AY555_RS08525 7d98dadc193a5b3412526d8d6600969b 590 Gene3D G3DSA:3.30.1360.70 2 111 3.8E-24 T 14-09-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AY555_RS08525 7d98dadc193a5b3412526d8d6600969b 590 Gene3D G3DSA:1.10.730.10 466 590 6.0E-32 T 14-09-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS08525 7d98dadc193a5b3412526d8d6600969b 590 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 15 94 1.8E-17 T 14-09-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AY555_RS08525 7d98dadc193a5b3412526d8d6600969b 590 SUPERFAMILY SSF55190 1 114 3.27E-20 T 14-09-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AY555_RS08525 7d98dadc193a5b3412526d8d6600969b 590 PANTHER PTHR11956 326 590 4.5E-166 T 14-09-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AY555_RS08525 7d98dadc193a5b3412526d8d6600969b 590 Pfam PF05746 DALR anticodon binding domain 459 590 3.5E-25 T 14-09-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AY555_RS08525 7d98dadc193a5b3412526d8d6600969b 590 SMART SM00836 459 590 8.4E-50 T 14-09-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AY555_RS08525 7d98dadc193a5b3412526d8d6600969b 590 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 133 142 - T 14-09-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS08525 7d98dadc193a5b3412526d8d6600969b 590 Gene3D G3DSA:3.40.50.620 118 465 8.8E-94 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS08525 7d98dadc193a5b3412526d8d6600969b 590 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 590 22.796 T 14-09-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AY555_RS08525 7d98dadc193a5b3412526d8d6600969b 590 PANTHER PTHR11956 1 310 4.5E-166 T 14-09-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AY555_RS08525 7d98dadc193a5b3412526d8d6600969b 590 SUPERFAMILY SSF52374 118 470 1.31E-79 T 14-09-2016 AY555_RS07315 e75af500cf5829cd159aa7bd3d1bb18a 279 SUPERFAMILY SSF81464 26 125 3.6E-32 T 14-09-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 AY555_RS07315 e75af500cf5829cd159aa7bd3d1bb18a 279 Gene3D G3DSA:2.60.40.420 121 268 1.9E-61 T 14-09-2016 IPR008972 Cupredoxin AY555_RS07315 e75af500cf5829cd159aa7bd3d1bb18a 279 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 195 243 - T 14-09-2016 IPR001505 Copper centre Cu(A) GO:0005507 AY555_RS07315 e75af500cf5829cd159aa7bd3d1bb18a 279 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 33 119 2.7E-25 T 14-09-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 AY555_RS07315 e75af500cf5829cd159aa7bd3d1bb18a 279 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 131 250 3.4E-53 T 14-09-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 AY555_RS07315 e75af500cf5829cd159aa7bd3d1bb18a 279 PRINTS PR01166 Cytochrome c oxidase subunit II signature 194 214 6.8E-57 T 14-09-2016 AY555_RS07315 e75af500cf5829cd159aa7bd3d1bb18a 279 PRINTS PR01166 Cytochrome c oxidase subunit II signature 93 105 6.8E-57 T 14-09-2016 AY555_RS07315 e75af500cf5829cd159aa7bd3d1bb18a 279 PRINTS PR01166 Cytochrome c oxidase subunit II signature 232 249 6.8E-57 T 14-09-2016 AY555_RS07315 e75af500cf5829cd159aa7bd3d1bb18a 279 PRINTS PR01166 Cytochrome c oxidase subunit II signature 170 191 6.8E-57 T 14-09-2016 AY555_RS07315 e75af500cf5829cd159aa7bd3d1bb18a 279 PRINTS PR01166 Cytochrome c oxidase subunit II signature 105 125 6.8E-57 T 14-09-2016 AY555_RS07315 e75af500cf5829cd159aa7bd3d1bb18a 279 PRINTS PR01166 Cytochrome c oxidase subunit II signature 127 146 6.8E-57 T 14-09-2016 AY555_RS07315 e75af500cf5829cd159aa7bd3d1bb18a 279 PRINTS PR01166 Cytochrome c oxidase subunit II signature 214 231 6.8E-57 T 14-09-2016 AY555_RS07315 e75af500cf5829cd159aa7bd3d1bb18a 279 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 44 259 1.7E-57 T 14-09-2016 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 AY555_RS07315 e75af500cf5829cd159aa7bd3d1bb18a 279 SUPERFAMILY SSF49503 129 262 2.4E-54 T 14-09-2016 IPR008972 Cupredoxin AY555_RS07315 e75af500cf5829cd159aa7bd3d1bb18a 279 Gene3D G3DSA:1.10.287.90 33 120 2.9E-32 T 14-09-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 AY555_RS07315 e75af500cf5829cd159aa7bd3d1bb18a 279 PANTHER PTHR22888 23 266 1.2E-113 T 14-09-2016 AY555_RS00650 2d512fc719802e756f09ff584a996bc7 768 Pfam PF07724 AAA domain (Cdc48 subfamily) 490 650 5.4E-46 T 14-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AY555_RS00650 2d512fc719802e756f09ff584a996bc7 768 PANTHER PTHR11638:SF111 1 138 0.0 T 14-09-2016 AY555_RS00650 2d512fc719802e756f09ff584a996bc7 768 PANTHER PTHR11638:SF111 154 766 0.0 T 14-09-2016 AY555_RS00650 2d512fc719802e756f09ff584a996bc7 768 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 306 318 - T 14-09-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 AY555_RS00650 2d512fc719802e756f09ff584a996bc7 768 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 659 736 9.4E-23 T 14-09-2016 IPR019489 Clp ATPase, C-terminal AY555_RS00650 2d512fc719802e756f09ff584a996bc7 768 SUPERFAMILY SSF52540 441 737 9.99E-75 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS00650 2d512fc719802e756f09ff584a996bc7 768 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 566 584 6.3E-37 T 14-09-2016 IPR001270 ClpA/B family GO:0005524 AY555_RS00650 2d512fc719802e756f09ff584a996bc7 768 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 495 513 6.3E-37 T 14-09-2016 IPR001270 ClpA/B family GO:0005524 AY555_RS00650 2d512fc719802e756f09ff584a996bc7 768 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 599 613 6.3E-37 T 14-09-2016 IPR001270 ClpA/B family GO:0005524 AY555_RS00650 2d512fc719802e756f09ff584a996bc7 768 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 537 555 6.3E-37 T 14-09-2016 IPR001270 ClpA/B family GO:0005524 AY555_RS00650 2d512fc719802e756f09ff584a996bc7 768 Gene3D G3DSA:1.10.8.60 356 439 6.7E-28 T 14-09-2016 AY555_RS00650 2d512fc719802e756f09ff584a996bc7 768 Gene3D G3DSA:3.40.50.300 172 354 1.3E-42 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS00650 2d512fc719802e756f09ff584a996bc7 768 PANTHER PTHR11638 1 138 0.0 T 14-09-2016 AY555_RS00650 2d512fc719802e756f09ff584a996bc7 768 PANTHER PTHR11638 154 766 0.0 T 14-09-2016 AY555_RS00650 2d512fc719802e756f09ff584a996bc7 768 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 522 540 - T 14-09-2016 IPR028299 ClpA/B, conserved site 2 AY555_RS00650 2d512fc719802e756f09ff584a996bc7 768 SMART SM01086 657 746 3.1E-31 T 14-09-2016 IPR019489 Clp ATPase, C-terminal AY555_RS00650 2d512fc719802e756f09ff584a996bc7 768 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 215 345 6.1E-11 T 14-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AY555_RS00650 2d512fc719802e756f09ff584a996bc7 768 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 738 0.0 T 14-09-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 AY555_RS00650 2d512fc719802e756f09ff584a996bc7 768 Gene3D G3DSA:3.40.50.300 446 667 5.4E-55 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS00650 2d512fc719802e756f09ff584a996bc7 768 SUPERFAMILY SSF81923 1 141 2.75E-55 T 14-09-2016 IPR004176 Clp, N-terminal GO:0019538 AY555_RS00650 2d512fc719802e756f09ff584a996bc7 768 SMART SM00382 210 356 2.5E-9 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS00650 2d512fc719802e756f09ff584a996bc7 768 SMART SM00382 491 654 5.2E-11 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS00650 2d512fc719802e756f09ff584a996bc7 768 SUPERFAMILY SSF52540 171 426 7.22E-66 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS00650 2d512fc719802e756f09ff584a996bc7 768 Gene3D G3DSA:1.10.1780.10 1 141 6.1E-39 T 14-09-2016 IPR004176 Clp, N-terminal GO:0019538 AY555_RS00650 2d512fc719802e756f09ff584a996bc7 768 Gene3D G3DSA:1.10.8.60 668 749 2.5E-27 T 14-09-2016 AY555_RS00650 2d512fc719802e756f09ff584a996bc7 768 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 61 2.1E-10 T 14-09-2016 IPR004176 Clp, N-terminal GO:0019538 AY555_RS01540 4341054f1fa00d45693fcec63321b9a9 159 PANTHER PTHR37952:SF2 1 159 9.6E-78 T 14-09-2016 AY555_RS01540 4341054f1fa00d45693fcec63321b9a9 159 PIRSF PIRSF003174 1 159 1.7E-68 T 14-09-2016 IPR010292 Uncharacterised protein family CreA AY555_RS01540 4341054f1fa00d45693fcec63321b9a9 159 Pfam PF05981 CreA protein 24 153 7.9E-59 T 14-09-2016 IPR010292 Uncharacterised protein family CreA AY555_RS01540 4341054f1fa00d45693fcec63321b9a9 159 PANTHER PTHR37952 1 159 9.6E-78 T 14-09-2016 AY555_RS09710 7d0e5d9005b1da90ebbfc723c09c1ddd 304 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 206 274 4.0E-9 T 14-09-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AY555_RS09710 7d0e5d9005b1da90ebbfc723c09c1ddd 304 Gene3D G3DSA:2.40.30.110 224 278 2.9E-4 T 14-09-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AY555_RS09710 7d0e5d9005b1da90ebbfc723c09c1ddd 304 SUPERFAMILY SSF101790 224 284 3.43E-5 T 14-09-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain AY555_RS09710 7d0e5d9005b1da90ebbfc723c09c1ddd 304 SUPERFAMILY SSF103025 6 219 2.35E-49 T 14-09-2016 AY555_RS09710 7d0e5d9005b1da90ebbfc723c09c1ddd 304 Pfam PF01571 Aminomethyltransferase folate-binding domain 8 100 5.5E-7 T 14-09-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal AY555_RS09710 7d0e5d9005b1da90ebbfc723c09c1ddd 304 Gene3D G3DSA:3.30.70.1400 15 98 2.4E-23 T 14-09-2016 AY555_RS09710 7d0e5d9005b1da90ebbfc723c09c1ddd 304 PANTHER PTHR22602 8 280 5.8E-55 T 14-09-2016 AY555_RS09710 7d0e5d9005b1da90ebbfc723c09c1ddd 304 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 166 231 1.8E-23 T 14-09-2016 IPR017703 YgfZ/GcvT conserved site AY555_RS09710 7d0e5d9005b1da90ebbfc723c09c1ddd 304 PANTHER PTHR22602:SF0 8 280 5.8E-55 T 14-09-2016 AY555_RS03560 a5011d259c6a8babc2dee73ba3a27176 229 SUPERFAMILY SSF75516 5 133 1.31E-26 T 14-09-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AY555_RS03560 a5011d259c6a8babc2dee73ba3a27176 229 Gene3D G3DSA:1.10.10.10 172 227 6.7E-8 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS03560 a5011d259c6a8babc2dee73ba3a27176 229 SUPERFAMILY SSF46894 165 228 3.4E-8 T 14-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AY555_RS03560 a5011d259c6a8babc2dee73ba3a27176 229 Gene3D G3DSA:3.30.450.80 5 156 3.9E-26 T 14-09-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AY555_RS03560 a5011d259c6a8babc2dee73ba3a27176 229 Pfam PF03472 Autoinducer binding domain 15 133 1.4E-21 T 14-09-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AY555_RS05205 d9aea4cf85f89bc9ddbb9f55806d7ad5 239 Gene3D G3DSA:3.40.50.1000 17 209 3.1E-32 T 14-09-2016 IPR023214 HAD-like domain AY555_RS05205 d9aea4cf85f89bc9ddbb9f55806d7ad5 239 SUPERFAMILY SSF56784 18 202 6.84E-34 T 14-09-2016 IPR023214 HAD-like domain AY555_RS05205 d9aea4cf85f89bc9ddbb9f55806d7ad5 239 Pfam PF13419 Haloacid dehalogenase-like hydrolase 20 196 6.3E-14 T 14-09-2016 IPR023214 HAD-like domain AY555_RS05205 d9aea4cf85f89bc9ddbb9f55806d7ad5 239 PANTHER PTHR12725:SF79 1 196 5.4E-40 T 14-09-2016 AY555_RS05205 d9aea4cf85f89bc9ddbb9f55806d7ad5 239 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 19 196 2.5E-20 T 14-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AY555_RS05205 d9aea4cf85f89bc9ddbb9f55806d7ad5 239 PANTHER PTHR12725 1 196 5.4E-40 T 14-09-2016 AY555_RS05205 d9aea4cf85f89bc9ddbb9f55806d7ad5 239 TIGRFAM TIGR01993 Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 18 196 3.3E-63 T 14-09-2016 IPR010237 Pyrimidine 5-nucleotidase AY555_RS03160 5c6cf2d837b7a2b8e599c8ad66600196 184 PANTHER PTHR10458 1 167 3.4E-70 T 14-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AY555_RS03160 5c6cf2d837b7a2b8e599c8ad66600196 184 Gene3D G3DSA:3.90.45.10 4 168 9.0E-64 T 14-09-2016 IPR023635 Peptide deformylase AY555_RS03160 5c6cf2d837b7a2b8e599c8ad66600196 184 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 6 162 2.9E-52 T 14-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AY555_RS03160 5c6cf2d837b7a2b8e599c8ad66600196 184 Hamap MF_00163 Peptide deformylase [def]. 2 165 30.91 T 14-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AY555_RS03160 5c6cf2d837b7a2b8e599c8ad66600196 184 PANTHER PTHR10458:SF10 1 167 3.4E-70 T 14-09-2016 AY555_RS03160 5c6cf2d837b7a2b8e599c8ad66600196 184 PIRSF PIRSF004749 1 180 2.2E-57 T 14-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AY555_RS03160 5c6cf2d837b7a2b8e599c8ad66600196 184 PRINTS PR01576 Peptide deformylase signature 92 103 5.4E-35 T 14-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AY555_RS03160 5c6cf2d837b7a2b8e599c8ad66600196 184 PRINTS PR01576 Peptide deformylase signature 33 62 5.4E-35 T 14-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AY555_RS03160 5c6cf2d837b7a2b8e599c8ad66600196 184 PRINTS PR01576 Peptide deformylase signature 104 122 5.4E-35 T 14-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AY555_RS03160 5c6cf2d837b7a2b8e599c8ad66600196 184 PRINTS PR01576 Peptide deformylase signature 123 152 5.4E-35 T 14-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AY555_RS03160 5c6cf2d837b7a2b8e599c8ad66600196 184 SUPERFAMILY SSF56420 2 167 4.45E-62 T 14-09-2016 IPR023635 Peptide deformylase AY555_RS03160 5c6cf2d837b7a2b8e599c8ad66600196 184 Pfam PF01327 Polypeptide deformylase 5 155 1.1E-50 T 14-09-2016 IPR023635 Peptide deformylase AY555_RS08800 fe681cbbcdb1f16701f86525749d2889 162 SUPERFAMILY SSF74982 14 141 6.8E-41 T 14-09-2016 IPR023620 Small protein B AY555_RS08800 fe681cbbcdb1f16701f86525749d2889 162 PANTHER PTHR30308 2 160 1.8E-66 T 14-09-2016 AY555_RS08800 fe681cbbcdb1f16701f86525749d2889 162 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 124 4.0E-26 T 14-09-2016 IPR000037 SsrA-binding protein GO:0003723 AY555_RS08800 fe681cbbcdb1f16701f86525749d2889 162 Pfam PF01668 SmpB protein 15 79 7.9E-25 T 14-09-2016 IPR000037 SsrA-binding protein GO:0003723 AY555_RS08800 fe681cbbcdb1f16701f86525749d2889 162 Hamap MF_00023 SsrA-binding protein [smpB]. 1 162 63.062 T 14-09-2016 IPR000037 SsrA-binding protein GO:0003723 AY555_RS08800 fe681cbbcdb1f16701f86525749d2889 162 Gene3D G3DSA:2.40.280.10 15 136 1.4E-42 T 14-09-2016 IPR023620 Small protein B AY555_RS08800 fe681cbbcdb1f16701f86525749d2889 162 PANTHER PTHR30308:SF2 2 160 1.8E-66 T 14-09-2016 AY555_RS08800 fe681cbbcdb1f16701f86525749d2889 162 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 158 1.0E-48 T 14-09-2016 IPR000037 SsrA-binding protein GO:0003723 AY555_RS09395 b677749b7a1db21402b86549f28a6c77 423 SMART SM00271 10 67 7.3E-21 T 14-09-2016 IPR001623 DnaJ domain AY555_RS09395 b677749b7a1db21402b86549f28a6c77 423 SMART SM00287 343 409 0.0065 T 14-09-2016 IPR003646 SH3-like domain, bacterial-type AY555_RS09395 b677749b7a1db21402b86549f28a6c77 423 ProSitePatterns PS00636 Nt-dnaJ domain signature. 52 71 - T 14-09-2016 IPR018253 DnaJ domain, conserved site AY555_RS09395 b677749b7a1db21402b86549f28a6c77 423 Pfam PF08239 Bacterial SH3 domain 354 406 4.7E-9 T 14-09-2016 IPR003646 SH3-like domain, bacterial-type AY555_RS09395 b677749b7a1db21402b86549f28a6c77 423 PANTHER PTHR24078 12 72 2.6E-24 T 14-09-2016 AY555_RS09395 b677749b7a1db21402b86549f28a6c77 423 PRINTS PR00625 DnaJ domain signature 47 67 9.5E-13 T 14-09-2016 IPR001623 DnaJ domain AY555_RS09395 b677749b7a1db21402b86549f28a6c77 423 PRINTS PR00625 DnaJ domain signature 31 46 9.5E-13 T 14-09-2016 IPR001623 DnaJ domain AY555_RS09395 b677749b7a1db21402b86549f28a6c77 423 PRINTS PR00625 DnaJ domain signature 13 31 9.5E-13 T 14-09-2016 IPR001623 DnaJ domain AY555_RS09395 b677749b7a1db21402b86549f28a6c77 423 Gene3D G3DSA:1.10.287.110 9 92 1.3E-22 T 14-09-2016 IPR001623 DnaJ domain AY555_RS09395 b677749b7a1db21402b86549f28a6c77 423 Pfam PF00226 DnaJ domain 12 72 2.9E-21 T 14-09-2016 IPR001623 DnaJ domain AY555_RS09395 b677749b7a1db21402b86549f28a6c77 423 SUPERFAMILY SSF46565 7 74 1.24E-21 T 14-09-2016 IPR001623 DnaJ domain AY555_RS09395 b677749b7a1db21402b86549f28a6c77 423 Gene3D G3DSA:2.30.30.40 371 420 4.2E-5 T 14-09-2016 AY555_RS03550 b9d4c5bb7f8400cbd43f3ff1d48ee046 289 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 185 280 1.0E-33 T 14-09-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 AY555_RS03550 b9d4c5bb7f8400cbd43f3ff1d48ee046 289 PANTHER PTHR23309 2 287 1.1E-141 T 14-09-2016 AY555_RS03550 b9d4c5bb7f8400cbd43f3ff1d48ee046 289 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 4 181 8.0E-63 T 14-09-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 AY555_RS03550 b9d4c5bb7f8400cbd43f3ff1d48ee046 289 SUPERFAMILY SSF48179 183 285 4.59E-34 T 14-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AY555_RS03550 b9d4c5bb7f8400cbd43f3ff1d48ee046 289 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 181 206 - T 14-09-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 AY555_RS03550 b9d4c5bb7f8400cbd43f3ff1d48ee046 289 Gene3D G3DSA:3.40.50.720 2 186 9.2E-56 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS03550 b9d4c5bb7f8400cbd43f3ff1d48ee046 289 SUPERFAMILY SSF51735 1 183 2.75E-57 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS03550 b9d4c5bb7f8400cbd43f3ff1d48ee046 289 PIRSF PIRSF000105 1 289 1.0E-86 T 14-09-2016 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 AY555_RS03550 b9d4c5bb7f8400cbd43f3ff1d48ee046 289 Gene3D G3DSA:1.10.1040.10 187 281 2.1E-35 T 14-09-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AY555_RS03905 acc3d8d5633488b2473bfb45b7e85188 387 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 36 364 5.6E-46 T 14-09-2016 AY555_RS03905 acc3d8d5633488b2473bfb45b7e85188 387 SUPERFAMILY SSF48208 10 374 2.3E-62 T 14-09-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 AY555_RS03905 acc3d8d5633488b2473bfb45b7e85188 387 Gene3D G3DSA:1.50.10.10 16 364 9.8E-52 T 14-09-2016 IPR012341 Six-hairpin glycosidase GO:0003824 AY555_RS03905 acc3d8d5633488b2473bfb45b7e85188 387 PANTHER PTHR15108 17 317 2.3E-23 T 14-09-2016 AY555_RS00845 b1caf07e6c2a034a0bd88bd8f4d333a9 338 SUPERFAMILY SSF47789 252 327 5.76E-26 T 14-09-2016 AY555_RS00845 b1caf07e6c2a034a0bd88bd8f4d333a9 338 Gene3D G3DSA:1.10.150.20 247 329 1.8E-35 T 14-09-2016 AY555_RS00845 b1caf07e6c2a034a0bd88bd8f4d333a9 338 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 6 318 36.088 T 14-09-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AY555_RS00845 b1caf07e6c2a034a0bd88bd8f4d333a9 338 SMART SM00662 26 233 1.9E-95 T 14-09-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AY555_RS00845 b1caf07e6c2a034a0bd88bd8f4d333a9 338 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 27 318 3.4E-117 T 14-09-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AY555_RS00845 b1caf07e6c2a034a0bd88bd8f4d333a9 338 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 251 309 1.2E-24 T 14-09-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AY555_RS00845 b1caf07e6c2a034a0bd88bd8f4d333a9 338 PANTHER PTHR32108:SF0 2 331 7.8E-139 T 14-09-2016 AY555_RS00845 b1caf07e6c2a034a0bd88bd8f4d333a9 338 Gene3D G3DSA:2.170.120.12 70 176 9.8E-46 T 14-09-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AY555_RS00845 b1caf07e6c2a034a0bd88bd8f4d333a9 338 SUPERFAMILY SSF56553 56 176 7.72E-43 T 14-09-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AY555_RS00845 b1caf07e6c2a034a0bd88bd8f4d333a9 338 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 157 4.2E-22 T 14-09-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AY555_RS00845 b1caf07e6c2a034a0bd88bd8f4d333a9 338 Gene3D G3DSA:3.30.1360.10 26 69 1.2E-7 T 14-09-2016 AY555_RS00845 b1caf07e6c2a034a0bd88bd8f4d333a9 338 PANTHER PTHR32108 2 331 7.8E-139 T 14-09-2016 AY555_RS00845 b1caf07e6c2a034a0bd88bd8f4d333a9 338 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 32 227 2.3E-24 T 14-09-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AY555_RS00845 b1caf07e6c2a034a0bd88bd8f4d333a9 338 SUPERFAMILY SSF55257 152 236 4.51E-30 T 14-09-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AY555_RS00845 b1caf07e6c2a034a0bd88bd8f4d333a9 338 SUPERFAMILY SSF55257 27 60 4.51E-30 T 14-09-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AY555_RS00845 b1caf07e6c2a034a0bd88bd8f4d333a9 338 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 258 329 4.0E-31 T 14-09-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AY555_RS09350 9fcb989ba6c5a864b51ad16ccb7ba6f8 339 Pfam PF14842 FliG N-terminal domain 11 112 6.5E-26 T 14-09-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain AY555_RS09350 9fcb989ba6c5a864b51ad16ccb7ba6f8 339 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 7 337 5.7E-77 T 14-09-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AY555_RS09350 9fcb989ba6c5a864b51ad16ccb7ba6f8 339 Pfam PF14841 FliG middle domain 121 193 3.4E-23 T 14-09-2016 IPR032779 Flagellar motor switch protein FliG, middle domain AY555_RS09350 9fcb989ba6c5a864b51ad16ccb7ba6f8 339 SUPERFAMILY SSF48029 8 120 3.01E-21 T 14-09-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical AY555_RS09350 9fcb989ba6c5a864b51ad16ccb7ba6f8 339 Gene3D G3DSA:1.10.220.30 200 336 4.5E-40 T 14-09-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical AY555_RS09350 9fcb989ba6c5a864b51ad16ccb7ba6f8 339 Gene3D G3DSA:1.10.220.30 13 75 1.2E-12 T 14-09-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical AY555_RS09350 9fcb989ba6c5a864b51ad16ccb7ba6f8 339 Gene3D G3DSA:1.10.220.30 109 194 3.0E-23 T 14-09-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical AY555_RS09350 9fcb989ba6c5a864b51ad16ccb7ba6f8 339 PANTHER PTHR30534 1 337 1.1E-88 T 14-09-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AY555_RS09350 9fcb989ba6c5a864b51ad16ccb7ba6f8 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 11 27 1.9E-60 T 14-09-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AY555_RS09350 9fcb989ba6c5a864b51ad16ccb7ba6f8 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 276 302 1.9E-60 T 14-09-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AY555_RS09350 9fcb989ba6c5a864b51ad16ccb7ba6f8 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 230 250 1.9E-60 T 14-09-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AY555_RS09350 9fcb989ba6c5a864b51ad16ccb7ba6f8 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 40 66 1.9E-60 T 14-09-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AY555_RS09350 9fcb989ba6c5a864b51ad16ccb7ba6f8 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 199 224 1.9E-60 T 14-09-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AY555_RS09350 9fcb989ba6c5a864b51ad16ccb7ba6f8 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 119 142 1.9E-60 T 14-09-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AY555_RS09350 9fcb989ba6c5a864b51ad16ccb7ba6f8 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 252 272 1.9E-60 T 14-09-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AY555_RS09350 9fcb989ba6c5a864b51ad16ccb7ba6f8 339 SUPERFAMILY SSF48029 120 328 5.36E-61 T 14-09-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical AY555_RS09350 9fcb989ba6c5a864b51ad16ccb7ba6f8 339 Pfam PF01706 FliG C-terminal domain 222 328 5.2E-39 T 14-09-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal AY555_RS09350 9fcb989ba6c5a864b51ad16ccb7ba6f8 339 PANTHER PTHR30534:SF0 1 337 1.1E-88 T 14-09-2016 AY555_RS09350 9fcb989ba6c5a864b51ad16ccb7ba6f8 339 PIRSF PIRSF003161 5 338 2.0E-112 T 14-09-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AY555_RS01440 ef2a0bc5a5c5c0b81d807a89acf49aff 286 PIRSF PIRSF006250 6 285 2.0E-92 T 14-09-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD AY555_RS01440 ef2a0bc5a5c5c0b81d807a89acf49aff 286 Gene3D G3DSA:3.90.1170.20 4 133 9.8E-43 T 14-09-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 AY555_RS01440 ef2a0bc5a5c5c0b81d807a89acf49aff 286 SUPERFAMILY SSF54675 5 111 4.71E-28 T 14-09-2016 AY555_RS01440 ef2a0bc5a5c5c0b81d807a89acf49aff 286 Gene3D G3DSA:3.20.20.70 134 273 1.2E-59 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS01440 ef2a0bc5a5c5c0b81d807a89acf49aff 286 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 24 111 1.6E-24 T 14-09-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 AY555_RS01440 ef2a0bc5a5c5c0b81d807a89acf49aff 286 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 13 282 7.7E-98 T 14-09-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 AY555_RS01440 ef2a0bc5a5c5c0b81d807a89acf49aff 286 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 113 282 5.4E-64 T 14-09-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 AY555_RS01440 ef2a0bc5a5c5c0b81d807a89acf49aff 286 SUPERFAMILY SSF51690 113 282 1.81E-57 T 14-09-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 AY555_RS01440 ef2a0bc5a5c5c0b81d807a89acf49aff 286 PANTHER PTHR32179 6 285 9.8E-118 T 14-09-2016 AY555_RS06250 bf5b92f6fd5f5046a8b40b4653a238d6 380 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 18 370 3.2E-96 T 14-09-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 AY555_RS06250 bf5b92f6fd5f5046a8b40b4653a238d6 380 PANTHER PTHR11933:SF10 16 372 2.3E-145 T 14-09-2016 AY555_RS06250 bf5b92f6fd5f5046a8b40b4653a238d6 380 Gene3D G3DSA:3.40.50.620 15 224 2.8E-78 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS06250 bf5b92f6fd5f5046a8b40b4653a238d6 380 SUPERFAMILY SSF52402 16 259 2.05E-51 T 14-09-2016 AY555_RS06250 bf5b92f6fd5f5046a8b40b4653a238d6 380 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 17 371 36.921 T 14-09-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 AY555_RS06250 bf5b92f6fd5f5046a8b40b4653a238d6 380 Pfam PF03054 tRNA methyl transferase 18 370 1.1E-111 T 14-09-2016 AY555_RS06250 bf5b92f6fd5f5046a8b40b4653a238d6 380 Gene3D G3DSA:2.30.30.280 231 287 4.9E-17 T 14-09-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 AY555_RS06250 bf5b92f6fd5f5046a8b40b4653a238d6 380 PANTHER PTHR11933 16 372 2.3E-145 T 14-09-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 AY555_RS06250 bf5b92f6fd5f5046a8b40b4653a238d6 380 Gene3D G3DSA:2.40.30.10 292 374 4.8E-18 T 14-09-2016 AY555_RS07210 65454877b0c8cab23434c1e048bc0686 744 SMART SM00387 498 625 3.5E-37 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS07210 65454877b0c8cab23434c1e048bc0686 744 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 498 619 4.2E-26 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS07210 65454877b0c8cab23434c1e048bc0686 744 Pfam PF00072 Response regulator receiver domain 86 196 5.2E-7 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS07210 65454877b0c8cab23434c1e048bc0686 744 Gene3D G3DSA:3.30.565.10 453 627 8.6E-45 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS07210 65454877b0c8cab23434c1e048bc0686 744 SUPERFAMILY SSF55785 260 375 6.46E-16 T 14-09-2016 IPR000014 PAS domain AY555_RS07210 65454877b0c8cab23434c1e048bc0686 744 PANTHER PTHR24423 230 633 1.1E-112 T 14-09-2016 AY555_RS07210 65454877b0c8cab23434c1e048bc0686 744 SUPERFAMILY SSF52172 84 260 3.13E-12 T 14-09-2016 IPR011006 CheY-like superfamily AY555_RS07210 65454877b0c8cab23434c1e048bc0686 744 SMART SM00086 326 366 1.7E-4 T 14-09-2016 IPR001610 PAC motif AY555_RS07210 65454877b0c8cab23434c1e048bc0686 744 SUPERFAMILY SSF47384 371 452 6.08E-22 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS07210 65454877b0c8cab23434c1e048bc0686 744 Gene3D G3DSA:1.10.287.130 380 447 4.6E-16 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS07210 65454877b0c8cab23434c1e048bc0686 744 PANTHER PTHR24423 30 41 1.1E-112 T 14-09-2016 AY555_RS07210 65454877b0c8cab23434c1e048bc0686 744 Gene3D G3DSA:3.30.450.20 241 364 1.7E-18 T 14-09-2016 AY555_RS07210 65454877b0c8cab23434c1e048bc0686 744 SMART SM00388 386 451 1.2E-24 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS07210 65454877b0c8cab23434c1e048bc0686 744 SMART SM00091 249 315 9.7E-6 T 14-09-2016 IPR000014 PAS domain AY555_RS07210 65454877b0c8cab23434c1e048bc0686 744 Pfam PF00512 His Kinase A (phospho-acceptor) domain 386 451 6.9E-20 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS07210 65454877b0c8cab23434c1e048bc0686 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 566 576 7.8E-15 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS07210 65454877b0c8cab23434c1e048bc0686 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 583 601 7.8E-15 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS07210 65454877b0c8cab23434c1e048bc0686 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 607 620 7.8E-15 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS07210 65454877b0c8cab23434c1e048bc0686 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 548 562 7.8E-15 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS07210 65454877b0c8cab23434c1e048bc0686 744 SUPERFAMILY SSF55874 440 619 4.19E-45 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS07210 65454877b0c8cab23434c1e048bc0686 744 PANTHER PTHR24423:SF382 230 633 1.1E-112 T 14-09-2016 AY555_RS07210 65454877b0c8cab23434c1e048bc0686 744 Gene3D G3DSA:3.40.50.2300 82 211 4.7E-13 T 14-09-2016 AY555_RS07210 65454877b0c8cab23434c1e048bc0686 744 PANTHER PTHR24423:SF382 30 41 1.1E-112 T 14-09-2016 AY555_RS07210 65454877b0c8cab23434c1e048bc0686 744 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 246 373 1.8E-19 T 14-09-2016 IPR000014 PAS domain AY555_RS07210 65454877b0c8cab23434c1e048bc0686 744 Pfam PF13426 PAS domain 259 365 1.3E-9 T 14-09-2016 IPR000014 PAS domain AY555_RS02070 2e8b05d07424db387637aa3e01fcc4af 397 Gene3D G3DSA:3.40.50.1270 180 385 3.1E-76 T 14-09-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AY555_RS02070 2e8b05d07424db387637aa3e01fcc4af 397 Pfam PF00162 Phosphoglycerate kinase 7 386 8.8E-144 T 14-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AY555_RS02070 2e8b05d07424db387637aa3e01fcc4af 397 PIRSF PIRSF000724 1 397 7.1E-142 T 14-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AY555_RS02070 2e8b05d07424db387637aa3e01fcc4af 397 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 6 397 38.143 T 14-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AY555_RS02070 2e8b05d07424db387637aa3e01fcc4af 397 Gene3D G3DSA:3.40.50.1260 5 179 2.6E-69 T 14-09-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AY555_RS02070 2e8b05d07424db387637aa3e01fcc4af 397 SUPERFAMILY SSF53748 4 396 7.3E-146 T 14-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AY555_RS02070 2e8b05d07424db387637aa3e01fcc4af 397 PANTHER PTHR11406 1 397 3.1E-189 T 14-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AY555_RS02070 2e8b05d07424db387637aa3e01fcc4af 397 PRINTS PR00477 Phosphoglycerate kinase family signature 168 190 6.5E-74 T 14-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AY555_RS02070 2e8b05d07424db387637aa3e01fcc4af 397 PRINTS PR00477 Phosphoglycerate kinase family signature 110 125 6.5E-74 T 14-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AY555_RS02070 2e8b05d07424db387637aa3e01fcc4af 397 PRINTS PR00477 Phosphoglycerate kinase family signature 191 210 6.5E-74 T 14-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AY555_RS02070 2e8b05d07424db387637aa3e01fcc4af 397 PRINTS PR00477 Phosphoglycerate kinase family signature 11 27 6.5E-74 T 14-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AY555_RS02070 2e8b05d07424db387637aa3e01fcc4af 397 PRINTS PR00477 Phosphoglycerate kinase family signature 138 160 6.5E-74 T 14-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AY555_RS02070 2e8b05d07424db387637aa3e01fcc4af 397 PRINTS PR00477 Phosphoglycerate kinase family signature 373 390 6.5E-74 T 14-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AY555_RS02070 2e8b05d07424db387637aa3e01fcc4af 397 PRINTS PR00477 Phosphoglycerate kinase family signature 313 338 6.5E-74 T 14-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AY555_RS02070 2e8b05d07424db387637aa3e01fcc4af 397 PRINTS PR00477 Phosphoglycerate kinase family signature 350 361 6.5E-74 T 14-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AY555_RS02070 2e8b05d07424db387637aa3e01fcc4af 397 PRINTS PR00477 Phosphoglycerate kinase family signature 32 54 6.5E-74 T 14-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AY555_RS01575 06655b2ab618b941abd91c1e8cbece2d 187 PANTHER PTHR33877 5 186 2.9E-68 T 14-09-2016 AY555_RS01575 06655b2ab618b941abd91c1e8cbece2d 187 SMART SM00507 79 132 2.6E-9 T 14-09-2016 IPR003615 HNH nuclease AY555_RS01575 06655b2ab618b941abd91c1e8cbece2d 187 Pfam PF14279 HNH endonuclease 92 145 2.6E-16 T 14-09-2016 IPR029471 HNH endonuclease 5 AY555_RS01575 06655b2ab618b941abd91c1e8cbece2d 187 PANTHER PTHR33877:SF2 5 186 2.9E-68 T 14-09-2016 AY555_RS02355 bdd18de1b7c8f52ca0640aaf7333edd5 561 SMART SM00382 319 510 7.6E-19 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS02355 bdd18de1b7c8f52ca0640aaf7333edd5 561 SMART SM00382 43 242 1.6E-18 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS02355 bdd18de1b7c8f52ca0640aaf7333edd5 561 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 512 536 1.5E-5 T 14-09-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AY555_RS02355 bdd18de1b7c8f52ca0640aaf7333edd5 561 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 245 271 0.0026 T 14-09-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AY555_RS02355 bdd18de1b7c8f52ca0640aaf7333edd5 561 PANTHER PTHR24220:SF574 16 418 7.1E-168 T 14-09-2016 AY555_RS02355 bdd18de1b7c8f52ca0640aaf7333edd5 561 Gene3D G3DSA:3.40.50.300 283 534 6.2E-79 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS02355 bdd18de1b7c8f52ca0640aaf7333edd5 561 Gene3D G3DSA:3.40.50.300 13 266 2.4E-72 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS02355 bdd18de1b7c8f52ca0640aaf7333edd5 561 SUPERFAMILY SSF52540 14 264 3.88E-68 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS02355 bdd18de1b7c8f52ca0640aaf7333edd5 561 PANTHER PTHR24220 16 418 7.1E-168 T 14-09-2016 AY555_RS02355 bdd18de1b7c8f52ca0640aaf7333edd5 561 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AY555_RS02355 bdd18de1b7c8f52ca0640aaf7333edd5 561 ProSitePatterns PS00211 ABC transporters family signature. 433 447 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AY555_RS02355 bdd18de1b7c8f52ca0640aaf7333edd5 561 Pfam PF00005 ABC transporter 35 192 9.0E-29 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AY555_RS02355 bdd18de1b7c8f52ca0640aaf7333edd5 561 Pfam PF00005 ABC transporter 311 461 2.6E-32 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AY555_RS02355 bdd18de1b7c8f52ca0640aaf7333edd5 561 SUPERFAMILY SSF52540 299 532 1.18E-66 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS07335 ca9b0ada09abd59c213f87ce12b3a8cd 678 PANTHER PTHR13847 237 597 6.9E-40 T 14-09-2016 AY555_RS07335 ca9b0ada09abd59c213f87ce12b3a8cd 678 PANTHER PTHR13847 617 675 6.9E-40 T 14-09-2016 AY555_RS07335 ca9b0ada09abd59c213f87ce12b3a8cd 678 Gene3D G3DSA:3.40.50.150 34 260 2.8E-83 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS07335 ca9b0ada09abd59c213f87ce12b3a8cd 678 Gene3D G3DSA:3.50.50.60 409 483 1.5E-26 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS07335 ca9b0ada09abd59c213f87ce12b3a8cd 678 Gene3D G3DSA:3.50.50.60 583 668 1.5E-26 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS07335 ca9b0ada09abd59c213f87ce12b3a8cd 678 Gene3D G3DSA:3.50.50.60 277 346 1.5E-26 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS07335 ca9b0ada09abd59c213f87ce12b3a8cd 678 PANTHER PTHR13847:SF182 237 597 6.9E-40 T 14-09-2016 AY555_RS07335 ca9b0ada09abd59c213f87ce12b3a8cd 678 PANTHER PTHR13847:SF182 617 675 6.9E-40 T 14-09-2016 AY555_RS07335 ca9b0ada09abd59c213f87ce12b3a8cd 678 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 29 671 22.534 T 14-09-2016 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 AY555_RS07335 ca9b0ada09abd59c213f87ce12b3a8cd 678 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 135 255 3.6E-39 T 14-09-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 AY555_RS07335 ca9b0ada09abd59c213f87ce12b3a8cd 678 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 278 675 2.4E-83 T 14-09-2016 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 AY555_RS07335 ca9b0ada09abd59c213f87ce12b3a8cd 678 SUPERFAMILY SSF51905 278 484 1.11E-26 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS07335 ca9b0ada09abd59c213f87ce12b3a8cd 678 SUPERFAMILY SSF51905 583 674 1.11E-26 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS07335 ca9b0ada09abd59c213f87ce12b3a8cd 678 Pfam PF01266 FAD dependent oxidoreductase 279 644 2.4E-31 T 14-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AY555_RS00535 58adde17eb4c9d3c1353313cdf205096 814 SMART SM00086 322 364 3.2E-4 T 14-09-2016 IPR001610 PAC motif AY555_RS00535 58adde17eb4c9d3c1353313cdf205096 814 SMART SM00086 200 242 9.9 T 14-09-2016 IPR001610 PAC motif AY555_RS00535 58adde17eb4c9d3c1353313cdf205096 814 Pfam PF00563 EAL domain 552 787 1.9E-69 T 14-09-2016 IPR001633 EAL domain AY555_RS00535 58adde17eb4c9d3c1353313cdf205096 814 Gene3D G3DSA:3.30.450.20 138 239 1.2E-7 T 14-09-2016 AY555_RS00535 58adde17eb4c9d3c1353313cdf205096 814 Gene3D G3DSA:3.30.450.20 240 356 3.3E-16 T 14-09-2016 AY555_RS00535 58adde17eb4c9d3c1353313cdf205096 814 SMART SM00091 250 320 0.0032 T 14-09-2016 IPR000014 PAS domain AY555_RS00535 58adde17eb4c9d3c1353313cdf205096 814 SMART SM00091 11 78 130.0 T 14-09-2016 IPR000014 PAS domain AY555_RS00535 58adde17eb4c9d3c1353313cdf205096 814 SMART SM00052 546 792 5.7E-122 T 14-09-2016 IPR001633 EAL domain AY555_RS00535 58adde17eb4c9d3c1353313cdf205096 814 SUPERFAMILY SSF55785 135 245 4.89E-11 T 14-09-2016 IPR000014 PAS domain AY555_RS00535 58adde17eb4c9d3c1353313cdf205096 814 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 374 534 4.8E-37 T 14-09-2016 IPR000160 GGDEF domain AY555_RS00535 58adde17eb4c9d3c1353313cdf205096 814 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 247 368 1.2E-13 T 14-09-2016 IPR000014 PAS domain AY555_RS00535 58adde17eb4c9d3c1353313cdf205096 814 Pfam PF13426 PAS domain 261 362 1.8E-11 T 14-09-2016 IPR000014 PAS domain AY555_RS00535 58adde17eb4c9d3c1353313cdf205096 814 Pfam PF13426 PAS domain 143 241 0.66 T 14-09-2016 IPR000014 PAS domain AY555_RS00535 58adde17eb4c9d3c1353313cdf205096 814 Gene3D G3DSA:3.20.20.450 550 799 5.2E-100 T 14-09-2016 IPR001633 EAL domain AY555_RS00535 58adde17eb4c9d3c1353313cdf205096 814 Pfam PF00990 Diguanylate cyclase, GGDEF domain 375 528 4.5E-45 T 14-09-2016 IPR000160 GGDEF domain AY555_RS00535 58adde17eb4c9d3c1353313cdf205096 814 SUPERFAMILY SSF55073 380 538 1.73E-45 T 14-09-2016 IPR029787 Nucleotide cyclase AY555_RS00535 58adde17eb4c9d3c1353313cdf205096 814 PANTHER PTHR33121 550 797 5.8E-88 T 14-09-2016 AY555_RS00535 58adde17eb4c9d3c1353313cdf205096 814 Gene3D G3DSA:3.30.450.20 17 70 4.6E-4 T 14-09-2016 AY555_RS00535 58adde17eb4c9d3c1353313cdf205096 814 PANTHER PTHR33121:SF13 550 797 5.8E-88 T 14-09-2016 AY555_RS00535 58adde17eb4c9d3c1353313cdf205096 814 SUPERFAMILY SSF141868 551 798 1.7E-90 T 14-09-2016 IPR001633 EAL domain AY555_RS00535 58adde17eb4c9d3c1353313cdf205096 814 SMART SM00267 364 536 2.2E-56 T 14-09-2016 IPR000160 GGDEF domain AY555_RS00535 58adde17eb4c9d3c1353313cdf205096 814 Gene3D G3DSA:3.30.70.270 377 542 1.9E-52 T 14-09-2016 AY555_RS00535 58adde17eb4c9d3c1353313cdf205096 814 SUPERFAMILY SSF55785 255 362 1.74E-16 T 14-09-2016 IPR000014 PAS domain AY555_RS05940 1fc125502ce66fd68f152e76806be1ea 311 Pfam PF12710 haloacid dehalogenase-like hydrolase 87 254 4.1E-18 T 14-09-2016 AY555_RS05940 1fc125502ce66fd68f152e76806be1ea 311 PANTHER PTHR10000:SF7 81 286 2.3E-64 T 14-09-2016 AY555_RS05940 1fc125502ce66fd68f152e76806be1ea 311 SUPERFAMILY SSF56784 85 290 2.85E-42 T 14-09-2016 IPR023214 HAD-like domain AY555_RS05940 1fc125502ce66fd68f152e76806be1ea 311 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 85 256 1.3E-27 T 14-09-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 AY555_RS05940 1fc125502ce66fd68f152e76806be1ea 311 Gene3D G3DSA:1.10.150.210 100 148 7.4E-23 T 14-09-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 AY555_RS05940 1fc125502ce66fd68f152e76806be1ea 311 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 77 285 3.8E-59 T 14-09-2016 AY555_RS05940 1fc125502ce66fd68f152e76806be1ea 311 Gene3D G3DSA:3.40.50.1000 149 271 1.7E-33 T 14-09-2016 IPR023214 HAD-like domain AY555_RS05940 1fc125502ce66fd68f152e76806be1ea 311 PANTHER PTHR10000 81 286 2.3E-64 T 14-09-2016 AY555_RS05075 2744043b49c4283e3002582394f7a43a 436 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 310 328 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05075 2744043b49c4283e3002582394f7a43a 436 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 97 113 0.0026 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05075 2744043b49c4283e3002582394f7a43a 436 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 304 321 0.69 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05075 2744043b49c4283e3002582394f7a43a 436 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 323 339 0.058 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05075 2744043b49c4283e3002582394f7a43a 436 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 123 140 0.039 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05075 2744043b49c4283e3002582394f7a43a 436 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 60 77 0.0036 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05075 2744043b49c4283e3002582394f7a43a 436 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 42 59 0.0025 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05075 2744043b49c4283e3002582394f7a43a 436 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 79 95 0.14 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05075 2744043b49c4283e3002582394f7a43a 436 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 120 138 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05075 2744043b49c4283e3002582394f7a43a 436 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 93 111 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05075 2744043b49c4283e3002582394f7a43a 436 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 111 129 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05075 2744043b49c4283e3002582394f7a43a 436 PRINTS PR00313 NodO calcium binding signature 40 51 7.3E-11 T 14-09-2016 AY555_RS05075 2744043b49c4283e3002582394f7a43a 436 PRINTS PR00313 NodO calcium binding signature 133 142 7.3E-11 T 14-09-2016 AY555_RS05075 2744043b49c4283e3002582394f7a43a 436 PRINTS PR00313 NodO calcium binding signature 61 69 7.3E-11 T 14-09-2016 AY555_RS05075 2744043b49c4283e3002582394f7a43a 436 PRINTS PR00313 NodO calcium binding signature 106 114 7.3E-11 T 14-09-2016 AY555_RS05075 2744043b49c4283e3002582394f7a43a 436 PANTHER PTHR38340 22 372 6.8E-13 T 14-09-2016 AY555_RS05075 2744043b49c4283e3002582394f7a43a 436 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 102 120 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05075 2744043b49c4283e3002582394f7a43a 436 SUPERFAMILY SSF51120 78 176 2.35E-21 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05075 2744043b49c4283e3002582394f7a43a 436 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 57 75 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05075 2744043b49c4283e3002582394f7a43a 436 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 351 373 5.0E-4 T 14-09-2016 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass AY555_RS05075 2744043b49c4283e3002582394f7a43a 436 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 48 66 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05075 2744043b49c4283e3002582394f7a43a 436 SUPERFAMILY SSF51120 18 92 4.06E-18 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05075 2744043b49c4283e3002582394f7a43a 436 Gene3D G3DSA:2.150.10.10 210 228 1.1E-42 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05075 2744043b49c4283e3002582394f7a43a 436 Gene3D G3DSA:2.150.10.10 22 176 1.1E-42 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05075 2744043b49c4283e3002582394f7a43a 436 Gene3D G3DSA:2.150.10.10 294 374 1.1E-14 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05075 2744043b49c4283e3002582394f7a43a 436 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 39 57 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05075 2744043b49c4283e3002582394f7a43a 436 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 84 102 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05075 2744043b49c4283e3002582394f7a43a 436 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 319 337 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05075 2744043b49c4283e3002582394f7a43a 436 SUPERFAMILY SSF51120 247 381 2.49E-17 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS08295 2f8ba28ea642633a7e39695b9a84d484 467 Gene3D G3DSA:3.40.50.2300 3 129 2.3E-33 T 14-09-2016 AY555_RS08295 2f8ba28ea642633a7e39695b9a84d484 467 Pfam PF02954 Bacterial regulatory protein, Fis family 416 454 2.9E-10 T 14-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AY555_RS08295 2f8ba28ea642633a7e39695b9a84d484 467 Gene3D G3DSA:1.10.10.60 411 457 3.1E-8 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AY555_RS08295 2f8ba28ea642633a7e39695b9a84d484 467 SUPERFAMILY SSF46689 355 458 7.17E-11 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AY555_RS08295 2f8ba28ea642633a7e39695b9a84d484 467 Gene3D G3DSA:3.40.50.300 141 314 4.1E-56 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08295 2f8ba28ea642633a7e39695b9a84d484 467 Pfam PF00158 Sigma-54 interaction domain 143 309 1.5E-57 T 14-09-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AY555_RS08295 2f8ba28ea642633a7e39695b9a84d484 467 Pfam PF00072 Response regulator receiver domain 5 116 4.2E-26 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS08295 2f8ba28ea642633a7e39695b9a84d484 467 SUPERFAMILY SSF52172 4 187 5.12E-40 T 14-09-2016 IPR011006 CheY-like superfamily AY555_RS08295 2f8ba28ea642633a7e39695b9a84d484 467 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 14-09-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AY555_RS08295 2f8ba28ea642633a7e39695b9a84d484 467 PANTHER PTHR32071 1 467 1.0E-198 T 14-09-2016 AY555_RS08295 2f8ba28ea642633a7e39695b9a84d484 467 SMART SM00382 162 305 5.0E-11 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS08295 2f8ba28ea642633a7e39695b9a84d484 467 PANTHER PTHR32071:SF17 1 467 1.0E-198 T 14-09-2016 AY555_RS08295 2f8ba28ea642633a7e39695b9a84d484 467 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 14-09-2016 IPR025944 Sigma-54 interaction domain, conserved site AY555_RS08295 2f8ba28ea642633a7e39695b9a84d484 467 SUPERFAMILY SSF52540 141 376 2.5E-65 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08295 2f8ba28ea642633a7e39695b9a84d484 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 439 459 2.9E-5 T 14-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AY555_RS08295 2f8ba28ea642633a7e39695b9a84d484 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 422 439 2.9E-5 T 14-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AY555_RS08295 2f8ba28ea642633a7e39695b9a84d484 467 SMART SM00448 3 116 6.3E-30 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS08295 2f8ba28ea642633a7e39695b9a84d484 467 Gene3D G3DSA:1.10.8.60 315 390 4.7E-22 T 14-09-2016 AY555_RS09700 c5a68182d0d1deaa752aa3e15f08c66f 319 Gene3D G3DSA:3.40.50.2000 138 315 1.6E-43 T 14-09-2016 AY555_RS09700 c5a68182d0d1deaa752aa3e15f08c66f 319 PANTHER PTHR30160:SF7 1 276 1.3E-22 T 14-09-2016 AY555_RS09700 c5a68182d0d1deaa752aa3e15f08c66f 319 PANTHER PTHR30160 1 276 1.3E-22 T 14-09-2016 AY555_RS09700 c5a68182d0d1deaa752aa3e15f08c66f 319 SUPERFAMILY SSF53756 3 315 4.08E-64 T 14-09-2016 AY555_RS09700 c5a68182d0d1deaa752aa3e15f08c66f 319 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 109 277 3.1E-28 T 14-09-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 AY555_RS09700 c5a68182d0d1deaa752aa3e15f08c66f 319 Gene3D G3DSA:3.40.50.2000 3 91 1.1E-13 T 14-09-2016 AY555_RS05575 c961ece216a8725356cdb9c34d56d669 939 PANTHER PTHR11472:SF37 219 892 3.1E-58 T 14-09-2016 AY555_RS05575 c961ece216a8725356cdb9c34d56d669 939 Gene3D G3DSA:3.40.50.300 727 879 1.3E-5 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS05575 c961ece216a8725356cdb9c34d56d669 939 SUPERFAMILY SSF52540 785 891 6.52E-14 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS05575 c961ece216a8725356cdb9c34d56d669 939 SUPERFAMILY SSF52540 244 296 6.52E-14 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS05575 c961ece216a8725356cdb9c34d56d669 939 Pfam PF13307 Helicase C-terminal domain 758 892 4.1E-14 T 14-09-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AY555_RS05575 c961ece216a8725356cdb9c34d56d669 939 SMART SM00491 769 896 3.3E-6 T 14-09-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AY555_RS05575 c961ece216a8725356cdb9c34d56d669 939 PANTHER PTHR11472 219 892 3.1E-58 T 14-09-2016 AY555_RS05575 c961ece216a8725356cdb9c34d56d669 939 Gene3D G3DSA:3.40.50.300 404 448 7.3E-10 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS05575 c961ece216a8725356cdb9c34d56d669 939 Gene3D G3DSA:3.40.50.300 244 326 7.3E-10 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS05740 58cde62ad05a70bbe0fbd914a251fdda 400 PANTHER PTHR11751:SF306 14 395 4.8E-162 T 14-09-2016 AY555_RS05740 58cde62ad05a70bbe0fbd914a251fdda 400 Gene3D G3DSA:3.90.1150.10 276 399 3.7E-42 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AY555_RS05740 58cde62ad05a70bbe0fbd914a251fdda 400 Gene3D G3DSA:3.40.640.10 45 275 3.5E-74 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AY555_RS05740 58cde62ad05a70bbe0fbd914a251fdda 400 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 14-09-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 AY555_RS05740 58cde62ad05a70bbe0fbd914a251fdda 400 Pfam PF00155 Aminotransferase class I and II 32 392 1.5E-76 T 14-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AY555_RS05740 58cde62ad05a70bbe0fbd914a251fdda 400 PANTHER PTHR11751 14 395 4.8E-162 T 14-09-2016 AY555_RS05740 58cde62ad05a70bbe0fbd914a251fdda 400 SUPERFAMILY SSF53383 1 398 2.86E-114 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AY555_RS01485 db30c8662029735310da361e85d6d47e 446 Pfam PF00512 His Kinase A (phospho-acceptor) domain 242 298 6.5E-9 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS01485 db30c8662029735310da361e85d6d47e 446 SUPERFAMILY SSF47384 226 297 1.65E-13 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS01485 db30c8662029735310da361e85d6d47e 446 PANTHER PTHR24423 182 446 1.7E-53 T 14-09-2016 AY555_RS01485 db30c8662029735310da361e85d6d47e 446 PANTHER PTHR24423 1 9 1.7E-53 T 14-09-2016 AY555_RS01485 db30c8662029735310da361e85d6d47e 446 SMART SM00387 339 446 8.3E-24 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS01485 db30c8662029735310da361e85d6d47e 446 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 342 445 3.2E-15 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS01485 db30c8662029735310da361e85d6d47e 446 Gene3D G3DSA:1.10.287.130 231 285 1.9E-15 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS01485 db30c8662029735310da361e85d6d47e 446 SMART SM00304 188 240 1.1E-5 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AY555_RS01485 db30c8662029735310da361e85d6d47e 446 SUPERFAMILY SSF55874 290 446 1.23E-32 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS01485 db30c8662029735310da361e85d6d47e 446 Pfam PF00672 HAMP domain 170 237 9.1E-9 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AY555_RS01485 db30c8662029735310da361e85d6d47e 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 387 7.2E-11 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS01485 db30c8662029735310da361e85d6d47e 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 426 7.2E-11 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS01485 db30c8662029735310da361e85d6d47e 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 401 7.2E-11 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS01485 db30c8662029735310da361e85d6d47e 446 Gene3D G3DSA:3.30.565.10 286 446 2.0E-30 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS01485 db30c8662029735310da361e85d6d47e 446 SMART SM00388 241 299 2.0E-10 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS03475 040ffae4e0e60c0eef3f6d66731b9043 655 Gene3D G3DSA:3.20.20.370 415 652 4.6E-42 T 14-09-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AY555_RS03475 040ffae4e0e60c0eef3f6d66731b9043 655 Pfam PF04748 Divergent polysaccharide deacetylase 431 649 7.5E-40 T 14-09-2016 IPR006837 Protein of unknown function DUF610, YibQ AY555_RS03475 040ffae4e0e60c0eef3f6d66731b9043 655 SUPERFAMILY SSF88713 427 650 6.23E-36 T 14-09-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AY555_RS03475 040ffae4e0e60c0eef3f6d66731b9043 655 PANTHER PTHR30105 416 651 4.6E-25 T 14-09-2016 AY555_RS03435 8ac5bda53473b7150fec77a96f6a93ca 412 Pfam PF01494 FAD binding domain 13 327 1.3E-25 T 14-09-2016 IPR002938 FAD-binding domain GO:0071949 AY555_RS03435 8ac5bda53473b7150fec77a96f6a93ca 412 SUPERFAMILY SSF51905 275 394 1.5E-56 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS03435 8ac5bda53473b7150fec77a96f6a93ca 412 SUPERFAMILY SSF51905 13 183 1.5E-56 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS03435 8ac5bda53473b7150fec77a96f6a93ca 412 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 162 177 2.9E-19 T 14-09-2016 AY555_RS03435 8ac5bda53473b7150fec77a96f6a93ca 412 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 288 303 2.9E-19 T 14-09-2016 AY555_RS03435 8ac5bda53473b7150fec77a96f6a93ca 412 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 14 36 2.9E-19 T 14-09-2016 AY555_RS03435 8ac5bda53473b7150fec77a96f6a93ca 412 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 303 319 2.9E-19 T 14-09-2016 AY555_RS03435 8ac5bda53473b7150fec77a96f6a93ca 412 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 14 398 2.0E-132 T 14-09-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 AY555_RS03435 8ac5bda53473b7150fec77a96f6a93ca 412 PANTHER PTHR13789:SF5 12 408 4.8E-112 T 14-09-2016 AY555_RS03435 8ac5bda53473b7150fec77a96f6a93ca 412 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 302 315 - T 14-09-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 AY555_RS03435 8ac5bda53473b7150fec77a96f6a93ca 412 Gene3D G3DSA:3.50.50.60 13 188 1.5E-43 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS03435 8ac5bda53473b7150fec77a96f6a93ca 412 Gene3D G3DSA:3.50.50.60 276 364 1.5E-43 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS03435 8ac5bda53473b7150fec77a96f6a93ca 412 PANTHER PTHR13789 12 408 4.8E-112 T 14-09-2016 AY555_RS06660 6b19c6d18da92875464cff17b45e9d49 192 SUPERFAMILY SSF52972 3 184 1.83E-56 T 14-09-2016 IPR029001 Inosine triphosphate pyrophosphatase-like AY555_RS06660 6b19c6d18da92875464cff17b45e9d49 192 TIGRFAM TIGR00172 maf: septum formation protein Maf 1 181 1.7E-44 T 14-09-2016 IPR003697 Maf-like protein GO:0005737 AY555_RS06660 6b19c6d18da92875464cff17b45e9d49 192 Hamap MF_00528 Septum formation protein Maf [maf]. 4 191 30.003 T 14-09-2016 IPR003697 Maf-like protein GO:0005737 AY555_RS06660 6b19c6d18da92875464cff17b45e9d49 192 Pfam PF02545 Maf-like protein 5 184 4.8E-49 T 14-09-2016 IPR003697 Maf-like protein GO:0005737 AY555_RS06660 6b19c6d18da92875464cff17b45e9d49 192 PIRSF PIRSF006305 1 190 5.7E-48 T 14-09-2016 IPR003697 Maf-like protein GO:0005737 AY555_RS06660 6b19c6d18da92875464cff17b45e9d49 192 Gene3D G3DSA:3.90.950.10 3 188 1.4E-60 T 14-09-2016 IPR029001 Inosine triphosphate pyrophosphatase-like AY555_RS05220 9b05cd714a936aaa6b8cf219b42b0e1a 194 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 99 113 - T 14-09-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 AY555_RS05220 9b05cd714a936aaa6b8cf219b42b0e1a 194 PANTHER PTHR33992 89 178 5.1E-16 T 14-09-2016 AY555_RS05220 9b05cd714a936aaa6b8cf219b42b0e1a 194 PANTHER PTHR33992 12 47 5.1E-16 T 14-09-2016 AY555_RS05220 9b05cd714a936aaa6b8cf219b42b0e1a 194 Pfam PF00825 Ribonuclease P 12 156 1.1E-18 T 14-09-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AY555_RS05220 9b05cd714a936aaa6b8cf219b42b0e1a 194 SUPERFAMILY SSF54211 12 44 4.3E-19 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AY555_RS05220 9b05cd714a936aaa6b8cf219b42b0e1a 194 SUPERFAMILY SSF54211 86 158 4.3E-19 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AY555_RS05220 9b05cd714a936aaa6b8cf219b42b0e1a 194 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 8 160 14.086 T 14-09-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AY555_RS05220 9b05cd714a936aaa6b8cf219b42b0e1a 194 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 12 159 3.9E-13 T 14-09-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AY555_RS05220 9b05cd714a936aaa6b8cf219b42b0e1a 194 Gene3D G3DSA:3.30.230.10 89 161 5.1E-26 T 14-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AY555_RS05220 9b05cd714a936aaa6b8cf219b42b0e1a 194 Gene3D G3DSA:3.30.230.10 12 47 5.1E-26 T 14-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AY555_RS09205 f378cbfee0eb0ebcc962d7ce4c429c5d 394 PIRSF PIRSF000525 24 382 3.2E-42 T 14-09-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 AY555_RS09205 f378cbfee0eb0ebcc962d7ce4c429c5d 394 TIGRFAM TIGR01365 serC_2: phosphoserine aminotransferase 9 380 2.6E-159 T 14-09-2016 IPR006271 Phosphoserine aminotransferase, Methanosarcina-type GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 AY555_RS09205 f378cbfee0eb0ebcc962d7ce4c429c5d 394 SUPERFAMILY SSF53383 9 379 8.9E-61 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AY555_RS09205 f378cbfee0eb0ebcc962d7ce4c429c5d 394 PANTHER PTHR21152 4 377 3.7E-135 T 14-09-2016 AY555_RS09205 f378cbfee0eb0ebcc962d7ce4c429c5d 394 Gene3D G3DSA:3.40.640.10 32 265 1.3E-39 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AY555_RS09205 f378cbfee0eb0ebcc962d7ce4c429c5d 394 PANTHER PTHR21152:SF23 4 377 3.7E-135 T 14-09-2016 AY555_RS03655 2411a996efc8248472169eef4b2c8193 438 Gene3D G3DSA:2.40.160.10 200 416 4.2E-35 T 14-09-2016 IPR023614 Porin domain AY555_RS03655 2411a996efc8248472169eef4b2c8193 438 Gene3D G3DSA:2.40.160.10 49 165 4.2E-35 T 14-09-2016 IPR023614 Porin domain AY555_RS03655 2411a996efc8248472169eef4b2c8193 438 Pfam PF13609 Gram-negative porin 24 406 1.8E-40 T 14-09-2016 AY555_RS03655 2411a996efc8248472169eef4b2c8193 438 SUPERFAMILY SSF56935 198 435 4.88E-29 T 14-09-2016 AY555_RS03655 2411a996efc8248472169eef4b2c8193 438 SUPERFAMILY SSF56935 43 167 4.88E-29 T 14-09-2016 AY555_RS07500 72258e50d8b3e8559c24edfd521aa191 152 PANTHER PTHR30558:SF7 16 151 2.5E-39 T 14-09-2016 AY555_RS07500 72258e50d8b3e8559c24edfd521aa191 152 PANTHER PTHR30558 16 151 2.5E-39 T 14-09-2016 AY555_RS07500 72258e50d8b3e8559c24edfd521aa191 152 Pfam PF02472 Biopolymer transport protein ExbD/TolR 19 143 9.4E-30 T 14-09-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 AY555_RS05310 d11d431e9cbda0eb8505f1d1344b3fdf 668 PANTHER PTHR32089:SF40 386 665 4.8E-123 T 14-09-2016 AY555_RS05310 d11d431e9cbda0eb8505f1d1344b3fdf 668 PANTHER PTHR32089 386 665 4.8E-123 T 14-09-2016 AY555_RS05310 d11d431e9cbda0eb8505f1d1344b3fdf 668 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 480 661 4.5E-35 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AY555_RS05310 d11d431e9cbda0eb8505f1d1344b3fdf 668 PANTHER PTHR32089:SF40 276 354 4.8E-123 T 14-09-2016 AY555_RS05310 d11d431e9cbda0eb8505f1d1344b3fdf 668 Gene3D G3DSA:3.30.450.20 111 191 7.3E-22 T 14-09-2016 AY555_RS05310 d11d431e9cbda0eb8505f1d1344b3fdf 668 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 535 564 2.0E-19 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AY555_RS05310 d11d431e9cbda0eb8505f1d1344b3fdf 668 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 583 612 2.0E-19 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AY555_RS05310 d11d431e9cbda0eb8505f1d1344b3fdf 668 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 506 533 2.0E-19 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AY555_RS05310 d11d431e9cbda0eb8505f1d1344b3fdf 668 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 428 457 2.0E-19 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AY555_RS05310 d11d431e9cbda0eb8505f1d1344b3fdf 668 Gene3D G3DSA:1.10.287.950 427 632 4.0E-46 T 14-09-2016 AY555_RS05310 d11d431e9cbda0eb8505f1d1344b3fdf 668 Pfam PF00672 HAMP domain 300 367 6.4E-8 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AY555_RS05310 d11d431e9cbda0eb8505f1d1344b3fdf 668 SMART SM00283 408 662 1.9E-46 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AY555_RS05310 d11d431e9cbda0eb8505f1d1344b3fdf 668 SUPERFAMILY SSF58104 414 661 2.75E-59 T 14-09-2016 AY555_RS05310 d11d431e9cbda0eb8505f1d1344b3fdf 668 SUPERFAMILY SSF58104 348 374 2.75E-59 T 14-09-2016 AY555_RS05310 d11d431e9cbda0eb8505f1d1344b3fdf 668 Pfam PF02743 Cache domain 57 281 1.6E-24 T 14-09-2016 IPR033479 Double Cache domain 1 AY555_RS05310 d11d431e9cbda0eb8505f1d1344b3fdf 668 SMART SM00304 319 372 7.5E-9 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AY555_RS05310 d11d431e9cbda0eb8505f1d1344b3fdf 668 SUPERFAMILY SSF103190 115 193 2.35E-9 T 14-09-2016 IPR029151 Periplasmic sensor domain-like AY555_RS05310 d11d431e9cbda0eb8505f1d1344b3fdf 668 PANTHER PTHR32089 276 354 4.8E-123 T 14-09-2016 AY555_RS05310 d11d431e9cbda0eb8505f1d1344b3fdf 668 Gene3D G3DSA:3.30.450.20 195 256 2.6E-4 T 14-09-2016 AY555_RS09135 e773af3d56e1516b9f445c33635ceca3 315 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 9 151 2.7E-34 T 14-09-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AY555_RS09135 e773af3d56e1516b9f445c33635ceca3 315 Gene3D G3DSA:3.40.50.1370 151 282 1.4E-46 T 14-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AY555_RS09135 e773af3d56e1516b9f445c33635ceca3 315 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 8 309 36.728 T 14-09-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AY555_RS09135 e773af3d56e1516b9f445c33635ceca3 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 259 268 4.6E-14 T 14-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AY555_RS09135 e773af3d56e1516b9f445c33635ceca3 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 139 150 4.6E-14 T 14-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AY555_RS09135 e773af3d56e1516b9f445c33635ceca3 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 55 74 4.6E-14 T 14-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AY555_RS09135 e773af3d56e1516b9f445c33635ceca3 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 271 294 4.6E-14 T 14-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AY555_RS09135 e773af3d56e1516b9f445c33635ceca3 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 45 67 5.1E-25 T 14-09-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AY555_RS09135 e773af3d56e1516b9f445c33635ceca3 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 138 155 5.1E-25 T 14-09-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AY555_RS09135 e773af3d56e1516b9f445c33635ceca3 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 288 302 5.1E-25 T 14-09-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AY555_RS09135 e773af3d56e1516b9f445c33635ceca3 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 222 231 5.1E-25 T 14-09-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AY555_RS09135 e773af3d56e1516b9f445c33635ceca3 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 263 268 5.1E-25 T 14-09-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AY555_RS09135 e773af3d56e1516b9f445c33635ceca3 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 83 92 5.1E-25 T 14-09-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AY555_RS09135 e773af3d56e1516b9f445c33635ceca3 315 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 55 62 - T 14-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AY555_RS09135 e773af3d56e1516b9f445c33635ceca3 315 Gene3D G3DSA:3.40.50.1370 9 150 2.0E-44 T 14-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AY555_RS09135 e773af3d56e1516b9f445c33635ceca3 315 PANTHER PTHR11405:SF16 1 306 8.8E-112 T 14-09-2016 AY555_RS09135 e773af3d56e1516b9f445c33635ceca3 315 SUPERFAMILY SSF53671 7 309 3.8E-90 T 14-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AY555_RS09135 e773af3d56e1516b9f445c33635ceca3 315 PANTHER PTHR11405 1 306 8.8E-112 T 14-09-2016 AY555_RS09135 e773af3d56e1516b9f445c33635ceca3 315 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 159 304 2.8E-21 T 14-09-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AY555_RS09135 e773af3d56e1516b9f445c33635ceca3 315 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 9 307 1.8E-82 T 14-09-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AY555_RS08315 48e1829c3841c40de04e008a4889d2bb 429 PANTHER PTHR10229 29 411 7.8E-160 T 14-09-2016 IPR016496 GTPase HflX GO:0005525 AY555_RS08315 48e1829c3841c40de04e008a4889d2bb 429 Hamap MF_00900 GTPase HflX [hflX]. 35 397 44.549 T 14-09-2016 IPR016496 GTPase HflX GO:0005525 AY555_RS08315 48e1829c3841c40de04e008a4889d2bb 429 SUPERFAMILY SSF52540 207 370 4.14E-34 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08315 48e1829c3841c40de04e008a4889d2bb 429 Gene3D G3DSA:3.40.50.300 207 368 6.4E-28 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08315 48e1829c3841c40de04e008a4889d2bb 429 Pfam PF13167 GTP-binding GTPase N-terminal 33 119 1.8E-23 T 14-09-2016 IPR025121 GTPase HflX, N-terminal AY555_RS08315 48e1829c3841c40de04e008a4889d2bb 429 PIRSF PIRSF006809 7 429 1.3E-138 T 14-09-2016 IPR016496 GTPase HflX GO:0005525 AY555_RS08315 48e1829c3841c40de04e008a4889d2bb 429 Pfam PF01926 50S ribosome-binding GTPase 209 321 2.6E-18 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AY555_RS08315 48e1829c3841c40de04e008a4889d2bb 429 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 29 366 3.0E-129 T 14-09-2016 IPR016496 GTPase HflX GO:0005525 AY555_RS08315 48e1829c3841c40de04e008a4889d2bb 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 209 229 3.2E-8 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AY555_RS08315 48e1829c3841c40de04e008a4889d2bb 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 276 294 3.2E-8 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AY555_RS08315 48e1829c3841c40de04e008a4889d2bb 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 230 248 3.2E-8 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AY555_RS08315 48e1829c3841c40de04e008a4889d2bb 429 Pfam PF16360 GTP-binding GTPase Middle Region 122 201 1.4E-30 T 14-09-2016 IPR032305 GTP-binding protein, middle domain AY555_RS08315 48e1829c3841c40de04e008a4889d2bb 429 PANTHER PTHR10229:SF0 29 411 7.8E-160 T 14-09-2016 AY555_RS08990 ee283a5acfe2dd6507cb6f5d8ce0a3a5 575 Gene3D G3DSA:3.30.70.270 155 304 1.3E-19 T 14-09-2016 AY555_RS08990 ee283a5acfe2dd6507cb6f5d8ce0a3a5 575 SMART SM00448 5 118 9.2E-37 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS08990 ee283a5acfe2dd6507cb6f5d8ce0a3a5 575 SUPERFAMILY SSF141868 319 564 2.62E-88 T 14-09-2016 IPR001633 EAL domain AY555_RS08990 ee283a5acfe2dd6507cb6f5d8ce0a3a5 575 Pfam PF00072 Response regulator receiver domain 7 118 3.9E-28 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS08990 ee283a5acfe2dd6507cb6f5d8ce0a3a5 575 Pfam PF00990 Diguanylate cyclase, GGDEF domain 153 298 8.8E-16 T 14-09-2016 IPR000160 GGDEF domain AY555_RS08990 ee283a5acfe2dd6507cb6f5d8ce0a3a5 575 Gene3D G3DSA:3.40.50.2300 4 130 1.1E-35 T 14-09-2016 AY555_RS08990 ee283a5acfe2dd6507cb6f5d8ce0a3a5 575 PANTHER PTHR33121:SF13 309 565 8.3E-87 T 14-09-2016 AY555_RS08990 ee283a5acfe2dd6507cb6f5d8ce0a3a5 575 PANTHER PTHR33121 309 565 8.3E-87 T 14-09-2016 AY555_RS08990 ee283a5acfe2dd6507cb6f5d8ce0a3a5 575 SUPERFAMILY SSF52172 4 151 2.42E-37 T 14-09-2016 IPR011006 CheY-like superfamily AY555_RS08990 ee283a5acfe2dd6507cb6f5d8ce0a3a5 575 SMART SM00267 142 305 1.3E-11 T 14-09-2016 IPR000160 GGDEF domain AY555_RS08990 ee283a5acfe2dd6507cb6f5d8ce0a3a5 575 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 149 299 2.7E-10 T 14-09-2016 IPR000160 GGDEF domain AY555_RS08990 ee283a5acfe2dd6507cb6f5d8ce0a3a5 575 Pfam PF00563 EAL domain 320 554 3.0E-67 T 14-09-2016 IPR001633 EAL domain AY555_RS08990 ee283a5acfe2dd6507cb6f5d8ce0a3a5 575 Gene3D G3DSA:3.20.20.450 318 565 1.4E-96 T 14-09-2016 IPR001633 EAL domain AY555_RS08990 ee283a5acfe2dd6507cb6f5d8ce0a3a5 575 SMART SM00052 314 559 4.5E-115 T 14-09-2016 IPR001633 EAL domain AY555_RS08990 ee283a5acfe2dd6507cb6f5d8ce0a3a5 575 SUPERFAMILY SSF55073 159 302 3.53E-21 T 14-09-2016 IPR029787 Nucleotide cyclase AY555_RS09780 49c4fee8002a0cbeae51cae137913d1e 296 Pfam PF00588 SpoU rRNA Methylase family 31 183 8.8E-27 T 14-09-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AY555_RS09780 49c4fee8002a0cbeae51cae137913d1e 296 Gene3D G3DSA:3.40.1280.10 31 189 1.5E-26 T 14-09-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AY555_RS09780 49c4fee8002a0cbeae51cae137913d1e 296 SUPERFAMILY SSF75217 25 190 4.97E-30 T 14-09-2016 IPR029028 Alpha/beta knot methyltransferases AY555_RS09780 49c4fee8002a0cbeae51cae137913d1e 296 PIRSF PIRSF004808 27 271 1.3E-73 T 14-09-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AY555_RS09780 49c4fee8002a0cbeae51cae137913d1e 296 PANTHER PTHR12029 32 120 4.0E-25 T 14-09-2016 AY555_RS09780 49c4fee8002a0cbeae51cae137913d1e 296 PANTHER PTHR12029 137 206 4.0E-25 T 14-09-2016 AY555_RS04010 396841d0a60036d1c286bc57bdb65b64 266 Pfam PF04296 Protein of unknown function (DUF448) 42 116 1.9E-16 T 14-09-2016 IPR007393 Domain of unknown function DUF448 AY555_RS04010 396841d0a60036d1c286bc57bdb65b64 266 Gene3D G3DSA:3.30.1230.10 37 126 3.4E-23 T 14-09-2016 IPR007393 Domain of unknown function DUF448 AY555_RS04010 396841d0a60036d1c286bc57bdb65b64 266 SUPERFAMILY SSF55315 123 211 8.37E-9 T 14-09-2016 IPR029064 50S ribosomal protein L30e-like AY555_RS04010 396841d0a60036d1c286bc57bdb65b64 266 PANTHER PTHR34215:SF1 22 174 5.0E-21 T 14-09-2016 AY555_RS04010 396841d0a60036d1c286bc57bdb65b64 266 SUPERFAMILY SSF64376 39 125 3.14E-20 T 14-09-2016 IPR007393 Domain of unknown function DUF448 AY555_RS04010 396841d0a60036d1c286bc57bdb65b64 266 PANTHER PTHR34215 22 174 5.0E-21 T 14-09-2016 AY555_RS01915 1730ac6431bf8574924b48fed3a2b6a6 332 SUPERFAMILY SSF53850 40 327 1.79E-64 T 14-09-2016 AY555_RS01915 1730ac6431bf8574924b48fed3a2b6a6 332 Gene3D G3DSA:3.40.190.100 119 264 2.5E-36 T 14-09-2016 AY555_RS01915 1730ac6431bf8574924b48fed3a2b6a6 332 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 45 313 9.9E-36 T 14-09-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 AY555_RS01915 1730ac6431bf8574924b48fed3a2b6a6 332 Gene3D G3DSA:3.40.190.10 43 117 1.1E-31 T 14-09-2016 AY555_RS01915 1730ac6431bf8574924b48fed3a2b6a6 332 Gene3D G3DSA:3.40.190.10 265 330 1.1E-31 T 14-09-2016 AY555_RS07745 261c44b8f4cc589a96387428a4b52104 338 SUPERFAMILY SSF142877 174 226 1.31E-9 T 14-09-2016 AY555_RS07745 261c44b8f4cc589a96387428a4b52104 338 Pfam PF14436 Bacterial EndoU nuclease 191 325 1.8E-12 T 14-09-2016 IPR029501 Bacterial EndoU nuclease AY555_RS02285 0b2031ab5f19f8fb32358131c8b479d8 238 SUPERFAMILY SSF51735 14 238 2.74E-37 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS02285 0b2031ab5f19f8fb32358131c8b479d8 238 PANTHER PTHR24322 153 186 1.2E-31 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS02285 0b2031ab5f19f8fb32358131c8b479d8 238 PANTHER PTHR24322 16 133 1.2E-31 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS02285 0b2031ab5f19f8fb32358131c8b479d8 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.5E-6 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS02285 0b2031ab5f19f8fb32358131c8b479d8 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 2.5E-6 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS02285 0b2031ab5f19f8fb32358131c8b479d8 238 PANTHER PTHR24322:SF540 153 186 1.2E-31 T 14-09-2016 AY555_RS02285 0b2031ab5f19f8fb32358131c8b479d8 238 PANTHER PTHR24322:SF540 16 133 1.2E-31 T 14-09-2016 AY555_RS02285 0b2031ab5f19f8fb32358131c8b479d8 238 Gene3D G3DSA:3.40.50.720 13 238 5.7E-38 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS02285 0b2031ab5f19f8fb32358131c8b479d8 238 Pfam PF00106 short chain dehydrogenase 13 198 2.5E-11 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS04960 1278c08aee4d552a8d602543c3d453ea 252 SUPERFAMILY SSF51735 8 251 4.24E-83 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS04960 1278c08aee4d552a8d602543c3d453ea 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 191 2.0E-6 T 14-09-2016 AY555_RS04960 1278c08aee4d552a8d602543c3d453ea 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 3.7E-44 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS04960 1278c08aee4d552a8d602543c3d453ea 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 3.7E-44 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS04960 1278c08aee4d552a8d602543c3d453ea 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 3.7E-44 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS04960 1278c08aee4d552a8d602543c3d453ea 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 3.7E-44 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS04960 1278c08aee4d552a8d602543c3d453ea 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 3.7E-44 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS04960 1278c08aee4d552a8d602543c3d453ea 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 3.7E-44 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS04960 1278c08aee4d552a8d602543c3d453ea 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 14-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AY555_RS04960 1278c08aee4d552a8d602543c3d453ea 252 PANTHER PTHR24322:SF328 13 144 4.3E-44 T 14-09-2016 AY555_RS04960 1278c08aee4d552a8d602543c3d453ea 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 9.4E-12 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS04960 1278c08aee4d552a8d602543c3d453ea 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 9.4E-12 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS04960 1278c08aee4d552a8d602543c3d453ea 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 9.4E-12 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS04960 1278c08aee4d552a8d602543c3d453ea 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 250 3.0E-64 T 14-09-2016 AY555_RS04960 1278c08aee4d552a8d602543c3d453ea 252 PANTHER PTHR24322:SF328 160 192 4.3E-44 T 14-09-2016 AY555_RS04960 1278c08aee4d552a8d602543c3d453ea 252 PANTHER PTHR24322 13 144 4.3E-44 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS04960 1278c08aee4d552a8d602543c3d453ea 252 Gene3D G3DSA:3.40.50.720 5 252 4.1E-88 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS04960 1278c08aee4d552a8d602543c3d453ea 252 PANTHER PTHR24322 160 192 4.3E-44 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS01145 a6a16c5da4dbc7a20d74030c06e66303 68 Pfam PF06568 Domain of unknown function (DUF1127) 10 46 1.6E-8 T 14-09-2016 IPR009506 Protein of unknown function DUF1127 AY555_RS00760 cc7ef9b8782a98d2ac285d2406db2b91 206 SMART SM00947 34 196 1.4E-56 T 14-09-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AY555_RS00760 cc7ef9b8782a98d2ac285d2406db2b91 206 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 46 53 - T 14-09-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AY555_RS00760 cc7ef9b8782a98d2ac285d2406db2b91 206 PANTHER PTHR11002 4 206 1.7E-53 T 14-09-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AY555_RS00760 cc7ef9b8782a98d2ac285d2406db2b91 206 Gene3D G3DSA:3.40.1050.10 5 204 2.1E-57 T 14-09-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AY555_RS00760 cc7ef9b8782a98d2ac285d2406db2b91 206 SUPERFAMILY SSF53056 7 203 1.44E-52 T 14-09-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AY555_RS00760 cc7ef9b8782a98d2ac285d2406db2b91 206 Pfam PF00484 Carbonic anhydrase 42 190 1.1E-40 T 14-09-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AY555_RS08165 cb64ff30fc2143bd30e00c8e0ff59eb6 367 PANTHER PTHR11079:SF10 1 216 1.5E-52 T 14-09-2016 AY555_RS08165 cb64ff30fc2143bd30e00c8e0ff59eb6 367 SUPERFAMILY SSF53927 1 138 9.96E-42 T 14-09-2016 IPR016193 Cytidine deaminase-like GO:0003824 AY555_RS08165 cb64ff30fc2143bd30e00c8e0ff59eb6 367 SUPERFAMILY SSF53597 142 350 1.37E-52 T 14-09-2016 IPR024072 Dihydrofolate reductase-like domain AY555_RS08165 cb64ff30fc2143bd30e00c8e0ff59eb6 367 PIRSF PIRSF006769 1 355 9.2E-118 T 14-09-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 AY555_RS08165 cb64ff30fc2143bd30e00c8e0ff59eb6 367 Pfam PF01872 RibD C-terminal domain 145 317 9.3E-42 T 14-09-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AY555_RS08165 cb64ff30fc2143bd30e00c8e0ff59eb6 367 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 141 348 3.1E-49 T 14-09-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 AY555_RS08165 cb64ff30fc2143bd30e00c8e0ff59eb6 367 Gene3D G3DSA:3.40.140.10 1 123 6.9E-29 T 14-09-2016 AY555_RS08165 cb64ff30fc2143bd30e00c8e0ff59eb6 367 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 45 83 - T 14-09-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AY555_RS08165 cb64ff30fc2143bd30e00c8e0ff59eb6 367 Gene3D G3DSA:3.40.430.10 124 349 2.7E-68 T 14-09-2016 IPR024072 Dihydrofolate reductase-like domain AY555_RS08165 cb64ff30fc2143bd30e00c8e0ff59eb6 367 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 2 94 4.9E-14 T 14-09-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 AY555_RS08165 cb64ff30fc2143bd30e00c8e0ff59eb6 367 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 1 349 1.7E-104 T 14-09-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 AY555_RS08165 cb64ff30fc2143bd30e00c8e0ff59eb6 367 PANTHER PTHR11079 1 216 1.5E-52 T 14-09-2016 AY555_RS08640 4374e69807a9b08afce56749941e48e0 373 Gene3D G3DSA:3.40.50.300 13 253 3.1E-72 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08640 4374e69807a9b08afce56749941e48e0 373 PANTHER PTHR24220:SF282 23 329 6.5E-104 T 14-09-2016 AY555_RS08640 4374e69807a9b08afce56749941e48e0 373 SUPERFAMILY SSF50331 258 370 1.29E-10 T 14-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal AY555_RS08640 4374e69807a9b08afce56749941e48e0 373 Pfam PF00005 ABC transporter 37 182 7.2E-33 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AY555_RS08640 4374e69807a9b08afce56749941e48e0 373 Pfam PF08402 TOBE domain 291 370 1.7E-5 T 14-09-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AY555_RS08640 4374e69807a9b08afce56749941e48e0 373 SMART SM00382 46 232 9.3E-18 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS08640 4374e69807a9b08afce56749941e48e0 373 PANTHER PTHR24220 23 329 6.5E-104 T 14-09-2016 AY555_RS08640 4374e69807a9b08afce56749941e48e0 373 SUPERFAMILY SSF52540 23 262 1.5E-78 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08640 4374e69807a9b08afce56749941e48e0 373 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AY555_RS00680 dc8132dd10f25859f7c08437462c7187 545 PANTHER PTHR22573 5 542 3.3E-243 T 14-09-2016 AY555_RS00680 dc8132dd10f25859f7c08437462c7187 545 Gene3D G3DSA:3.40.120.10 198 284 1.0E-35 T 14-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS00680 dc8132dd10f25859f7c08437462c7187 545 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 192 288 1.5E-12 T 14-09-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS00680 dc8132dd10f25859f7c08437462c7187 545 Gene3D G3DSA:3.40.120.10 7 197 2.3E-56 T 14-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS00680 dc8132dd10f25859f7c08437462c7187 545 SUPERFAMILY SSF53738 280 416 4.71E-36 T 14-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS00680 dc8132dd10f25859f7c08437462c7187 545 SUPERFAMILY SSF55957 411 545 7.32E-36 T 14-09-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS00680 dc8132dd10f25859f7c08437462c7187 545 Gene3D G3DSA:3.30.310.50 404 545 1.5E-47 T 14-09-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS00680 dc8132dd10f25859f7c08437462c7187 545 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 207 226 2.3E-22 T 14-09-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS00680 dc8132dd10f25859f7c08437462c7187 545 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 108 122 2.3E-22 T 14-09-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS00680 dc8132dd10f25859f7c08437462c7187 545 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 243 256 2.3E-22 T 14-09-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS00680 dc8132dd10f25859f7c08437462c7187 545 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 272 287 2.3E-22 T 14-09-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS00680 dc8132dd10f25859f7c08437462c7187 545 SUPERFAMILY SSF53738 6 214 1.57E-45 T 14-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS00680 dc8132dd10f25859f7c08437462c7187 545 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 109 118 - T 14-09-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS00680 dc8132dd10f25859f7c08437462c7187 545 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 16 155 4.3E-30 T 14-09-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS00680 dc8132dd10f25859f7c08437462c7187 545 PANTHER PTHR22573:SF2 5 542 3.3E-243 T 14-09-2016 AY555_RS00680 dc8132dd10f25859f7c08437462c7187 545 SUPERFAMILY SSF53738 185 293 5.89E-29 T 14-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS00680 dc8132dd10f25859f7c08437462c7187 545 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 297 409 1.6E-29 T 14-09-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS00680 dc8132dd10f25859f7c08437462c7187 545 Gene3D G3DSA:3.40.120.10 285 403 5.8E-43 T 14-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS01605 d2f32406564dd24bc2e216d49d11abfa 297 PANTHER PTHR30349 1 297 3.7E-92 T 14-09-2016 AY555_RS01605 d2f32406564dd24bc2e216d49d11abfa 297 PANTHER PTHR30349:SF5 1 297 3.7E-92 T 14-09-2016 AY555_RS01605 d2f32406564dd24bc2e216d49d11abfa 297 Pfam PF00589 Phage integrase family 97 271 3.0E-44 T 14-09-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AY555_RS01605 d2f32406564dd24bc2e216d49d11abfa 297 Gene3D G3DSA:1.10.443.10 96 279 7.4E-52 T 14-09-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AY555_RS01605 d2f32406564dd24bc2e216d49d11abfa 297 SUPERFAMILY SSF56349 6 278 5.0E-55 T 14-09-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AY555_RS01605 d2f32406564dd24bc2e216d49d11abfa 297 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 1 286 26.29 T 14-09-2016 IPR023009 Tyrosine recombinase XerC/XerD AY555_RS01605 d2f32406564dd24bc2e216d49d11abfa 297 Gene3D G3DSA:1.10.150.130 2 84 1.1E-20 T 14-09-2016 IPR023109 Integrase/recombinase, N-terminal AY555_RS01605 d2f32406564dd24bc2e216d49d11abfa 297 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 3 73 3.0E-15 T 14-09-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AY555_RS07965 9eadcdbd891e713e46d3da2ddccd9ffd 886 Pfam PF13641 Glycosyltransferase like family 2 419 653 1.6E-30 T 14-09-2016 AY555_RS07965 9eadcdbd891e713e46d3da2ddccd9ffd 886 SUPERFAMILY SSF51445 41 301 9.04E-44 T 14-09-2016 IPR017853 Glycoside hydrolase superfamily AY555_RS07965 9eadcdbd891e713e46d3da2ddccd9ffd 886 SUPERFAMILY SSF53448 418 681 1.78E-40 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AY555_RS07965 9eadcdbd891e713e46d3da2ddccd9ffd 886 Gene3D G3DSA:3.90.550.10 419 669 3.2E-24 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AY555_RS07965 9eadcdbd891e713e46d3da2ddccd9ffd 886 PANTHER PTHR16631 24 311 1.3E-44 T 14-09-2016 AY555_RS07965 9eadcdbd891e713e46d3da2ddccd9ffd 886 Gene3D G3DSA:3.20.20.80 60 302 6.3E-25 T 14-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AY555_RS07965 9eadcdbd891e713e46d3da2ddccd9ffd 886 Pfam PF00332 Glycosyl hydrolases family 17 220 301 1.5E-6 T 14-09-2016 IPR000490 Glycoside hydrolase family 17 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.39 AY555_RS07540 96cdae594fd8061574efc284fd0a2444 462 Gene3D G3DSA:3.30.310.50 374 454 3.9E-12 T 14-09-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS07540 96cdae594fd8061574efc284fd0a2444 462 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 165 262 1.0E-18 T 14-09-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS07540 96cdae594fd8061574efc284fd0a2444 462 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 139 1.3E-44 T 14-09-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS07540 96cdae594fd8061574efc284fd0a2444 462 Gene3D G3DSA:3.40.120.10 259 373 6.0E-37 T 14-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS07540 96cdae594fd8061574efc284fd0a2444 462 SUPERFAMILY SSF53738 266 373 2.16E-32 T 14-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS07540 96cdae594fd8061574efc284fd0a2444 462 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 384 453 3.2E-11 T 14-09-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS07540 96cdae594fd8061574efc284fd0a2444 462 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 454 6.3E-188 T 14-09-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS07540 96cdae594fd8061574efc284fd0a2444 462 SUPERFAMILY SSF53738 164 264 9.81E-29 T 14-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS07540 96cdae594fd8061574efc284fd0a2444 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 96 110 5.2E-13 T 14-09-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS07540 96cdae594fd8061574efc284fd0a2444 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 182 201 5.2E-13 T 14-09-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS07540 96cdae594fd8061574efc284fd0a2444 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 242 257 5.2E-13 T 14-09-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS07540 96cdae594fd8061574efc284fd0a2444 462 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 266 377 3.0E-34 T 14-09-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS07540 96cdae594fd8061574efc284fd0a2444 462 SUPERFAMILY SSF53738 3 189 9.42E-49 T 14-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS07540 96cdae594fd8061574efc284fd0a2444 462 Gene3D G3DSA:3.40.120.10 184 257 1.3E-26 T 14-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS07540 96cdae594fd8061574efc284fd0a2444 462 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 97 106 - T 14-09-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS07540 96cdae594fd8061574efc284fd0a2444 462 Gene3D G3DSA:3.40.120.10 4 141 3.8E-47 T 14-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS07540 96cdae594fd8061574efc284fd0a2444 462 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 456 47.205 T 14-09-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS07540 96cdae594fd8061574efc284fd0a2444 462 PANTHER PTHR22573 1 462 1.5E-159 T 14-09-2016 AY555_RS07540 96cdae594fd8061574efc284fd0a2444 462 SUPERFAMILY SSF55957 367 456 4.97E-18 T 14-09-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS07540 96cdae594fd8061574efc284fd0a2444 462 PANTHER PTHR22573:SF15 1 462 1.5E-159 T 14-09-2016 AY555_RS04830 6e5090a39224f2cd86ff28d034d67667 297 PANTHER PTHR11693 1 297 4.1E-123 T 14-09-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AY555_RS04830 6e5090a39224f2cd86ff28d034d67667 297 SUPERFAMILY SSF52943 2 297 1.31E-89 T 14-09-2016 IPR023633 ATPase, F1 complex, gamma subunit domain AY555_RS04830 6e5090a39224f2cd86ff28d034d67667 297 Pfam PF00231 ATP synthase 3 296 6.4E-93 T 14-09-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AY555_RS04830 6e5090a39224f2cd86ff28d034d67667 297 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 297 7.1E-103 T 14-09-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AY555_RS04830 6e5090a39224f2cd86ff28d034d67667 297 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 283 296 - T 14-09-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site AY555_RS04830 6e5090a39224f2cd86ff28d034d67667 297 Gene3D G3DSA:1.10.287.80 247 292 2.3E-29 T 14-09-2016 AY555_RS04830 6e5090a39224f2cd86ff28d034d67667 297 Gene3D G3DSA:1.10.287.80 19 60 2.3E-32 T 14-09-2016 AY555_RS04830 6e5090a39224f2cd86ff28d034d67667 297 Gene3D G3DSA:1.10.287.80 212 246 2.3E-32 T 14-09-2016 AY555_RS04830 6e5090a39224f2cd86ff28d034d67667 297 PRINTS PR00126 ATP synthase gamma subunit signature 171 188 3.5E-33 T 14-09-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AY555_RS04830 6e5090a39224f2cd86ff28d034d67667 297 PRINTS PR00126 ATP synthase gamma subunit signature 76 95 3.5E-33 T 14-09-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AY555_RS04830 6e5090a39224f2cd86ff28d034d67667 297 PRINTS PR00126 ATP synthase gamma subunit signature 244 263 3.5E-33 T 14-09-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AY555_RS04830 6e5090a39224f2cd86ff28d034d67667 297 PRINTS PR00126 ATP synthase gamma subunit signature 275 296 3.5E-33 T 14-09-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AY555_RS04830 6e5090a39224f2cd86ff28d034d67667 297 Gene3D G3DSA:3.40.1380.10 75 196 1.2E-35 T 14-09-2016 AY555_RS04830 6e5090a39224f2cd86ff28d034d67667 297 PIRSF PIRSF039089 1 297 2.0E-101 T 14-09-2016 AY555_RS04830 6e5090a39224f2cd86ff28d034d67667 297 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 297 33.803 T 14-09-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AY555_RS05300 ba825d7c485ee5c67992a6726f7ce187 316 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 20 308 26.297 T 14-09-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 AY555_RS05300 ba825d7c485ee5c67992a6726f7ce187 316 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 87 109 - T 14-09-2016 IPR030470 UbiA prenyltransferase conserved site AY555_RS05300 ba825d7c485ee5c67992a6726f7ce187 316 Pfam PF01040 UbiA prenyltransferase family 44 289 7.5E-53 T 14-09-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 AY555_RS05300 ba825d7c485ee5c67992a6726f7ce187 316 PANTHER PTHR11048 2 309 4.1E-107 T 14-09-2016 AY555_RS05300 ba825d7c485ee5c67992a6726f7ce187 316 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 25 306 6.4E-100 T 14-09-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 AY555_RS05300 ba825d7c485ee5c67992a6726f7ce187 316 PANTHER PTHR11048:SF28 2 309 4.1E-107 T 14-09-2016 AY555_RS05960 e7a99d55eaddb25d53c9d10bb9c182b8 346 PANTHER PTHR19375:SF117 10 329 8.3E-169 T 14-09-2016 AY555_RS05960 e7a99d55eaddb25d53c9d10bb9c182b8 346 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 10 339 4.3E-159 T 14-09-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AY555_RS05960 e7a99d55eaddb25d53c9d10bb9c182b8 346 SUPERFAMILY SSF53067 150 333 6.29E-47 T 14-09-2016 AY555_RS05960 e7a99d55eaddb25d53c9d10bb9c182b8 346 Pfam PF06723 MreB/Mbl protein 11 339 1.2E-151 T 14-09-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AY555_RS05960 e7a99d55eaddb25d53c9d10bb9c182b8 346 SUPERFAMILY SSF53067 10 149 3.58E-40 T 14-09-2016 AY555_RS05960 e7a99d55eaddb25d53c9d10bb9c182b8 346 Gene3D G3DSA:3.30.420.40 11 160 6.3E-48 T 14-09-2016 AY555_RS05960 e7a99d55eaddb25d53c9d10bb9c182b8 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 70 93 2.0E-63 T 14-09-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AY555_RS05960 e7a99d55eaddb25d53c9d10bb9c182b8 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 133 152 2.0E-63 T 14-09-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AY555_RS05960 e7a99d55eaddb25d53c9d10bb9c182b8 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 188 208 2.0E-63 T 14-09-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AY555_RS05960 e7a99d55eaddb25d53c9d10bb9c182b8 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 50 68 2.0E-63 T 14-09-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AY555_RS05960 e7a99d55eaddb25d53c9d10bb9c182b8 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 303 329 2.0E-63 T 14-09-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AY555_RS05960 e7a99d55eaddb25d53c9d10bb9c182b8 346 Gene3D G3DSA:3.30.420.40 161 187 3.1E-32 T 14-09-2016 AY555_RS05960 e7a99d55eaddb25d53c9d10bb9c182b8 346 Gene3D G3DSA:3.30.420.40 266 320 3.1E-32 T 14-09-2016 AY555_RS05960 e7a99d55eaddb25d53c9d10bb9c182b8 346 PANTHER PTHR19375 10 329 8.3E-169 T 14-09-2016 AY555_RS05960 e7a99d55eaddb25d53c9d10bb9c182b8 346 Gene3D G3DSA:3.90.640.10 188 262 1.9E-28 T 14-09-2016 AY555_RS00095 62aad81a6736293dd50bd658c2e08677 142 Pfam PF01037 Lrp/AsnC ligand binding domain 68 138 1.6E-14 T 14-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AY555_RS00095 62aad81a6736293dd50bd658c2e08677 142 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 2.5E-13 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AY555_RS00095 62aad81a6736293dd50bd658c2e08677 142 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 2.5E-13 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AY555_RS00095 62aad81a6736293dd50bd658c2e08677 142 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 2.5E-13 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AY555_RS00095 62aad81a6736293dd50bd658c2e08677 142 SMART SM00344 2 108 2.2E-23 T 14-09-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AY555_RS00095 62aad81a6736293dd50bd658c2e08677 142 Gene3D G3DSA:3.30.70.920 66 138 2.2E-15 T 14-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AY555_RS00095 62aad81a6736293dd50bd658c2e08677 142 Gene3D G3DSA:1.10.10.10 2 54 8.8E-22 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS00095 62aad81a6736293dd50bd658c2e08677 142 PANTHER PTHR30154 2 138 3.4E-34 T 14-09-2016 AY555_RS00095 62aad81a6736293dd50bd658c2e08677 142 SUPERFAMILY SSF54909 65 141 3.62E-14 T 14-09-2016 IPR011008 Dimeric alpha-beta barrel AY555_RS00095 62aad81a6736293dd50bd658c2e08677 142 SUPERFAMILY SSF46785 1 56 7.96E-15 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS00095 62aad81a6736293dd50bd658c2e08677 142 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 49 3.4E-14 T 14-09-2016 AY555_RS05405 204f65b6502c006723a46f645d44148b 301 PANTHER PTHR33608:SF2 15 298 5.0E-41 T 14-09-2016 AY555_RS05405 204f65b6502c006723a46f645d44148b 301 PANTHER PTHR33608 15 298 5.0E-41 T 14-09-2016 AY555_RS05405 204f65b6502c006723a46f645d44148b 301 Pfam PF01882 Protein of unknown function DUF58 47 121 1.1E-11 T 14-09-2016 IPR002881 Domain of unknown function DUF58 AY555_RS09955 df3d5e9103f53f79a43e2b6fa664b851 298 Pfam PF08548 Peptidase M10 serralysin C terminal 126 254 1.7E-11 T 14-09-2016 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 AY555_RS09955 df3d5e9103f53f79a43e2b6fa664b851 298 PRINTS PR00313 NodO calcium binding signature 70 81 8.6E-11 T 14-09-2016 AY555_RS09955 df3d5e9103f53f79a43e2b6fa664b851 298 PRINTS PR00313 NodO calcium binding signature 182 191 8.6E-11 T 14-09-2016 AY555_RS09955 df3d5e9103f53f79a43e2b6fa664b851 298 PRINTS PR00313 NodO calcium binding signature 91 99 8.6E-11 T 14-09-2016 AY555_RS09955 df3d5e9103f53f79a43e2b6fa664b851 298 PRINTS PR00313 NodO calcium binding signature 146 154 8.6E-11 T 14-09-2016 AY555_RS09955 df3d5e9103f53f79a43e2b6fa664b851 298 SUPERFAMILY SSF51120 139 232 2.49E-19 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS09955 df3d5e9103f53f79a43e2b6fa664b851 298 SUPERFAMILY SSF51120 7 105 2.49E-10 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS09955 df3d5e9103f53f79a43e2b6fa664b851 298 Gene3D G3DSA:2.150.10.10 7 236 1.5E-24 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS04295 0ccf76e87c3516ce3c62a14d2c6a2dc0 568 SUPERFAMILY SSF90123 23 318 1.23E-50 T 14-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AY555_RS04295 0ccf76e87c3516ce3c62a14d2c6a2dc0 568 Pfam PF00005 ABC transporter 353 500 1.2E-18 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AY555_RS04295 0ccf76e87c3516ce3c62a14d2c6a2dc0 568 SUPERFAMILY SSF52540 328 552 1.07E-41 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04295 0ccf76e87c3516ce3c62a14d2c6a2dc0 568 Gene3D G3DSA:3.40.50.300 335 551 1.6E-40 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04295 0ccf76e87c3516ce3c62a14d2c6a2dc0 568 SMART SM00382 362 565 2.8E-9 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS04295 0ccf76e87c3516ce3c62a14d2c6a2dc0 568 PANTHER PTHR24221 24 538 1.2E-65 T 14-09-2016 AY555_RS04295 0ccf76e87c3516ce3c62a14d2c6a2dc0 568 Gene3D G3DSA:1.20.1560.10 22 318 9.2E-51 T 14-09-2016 AY555_RS04295 0ccf76e87c3516ce3c62a14d2c6a2dc0 568 Pfam PF00664 ABC transporter transmembrane region 27 287 8.3E-35 T 14-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AY555_RS09235 2159d79b343d149c19c34c4586dc866e 147 SUPERFAMILY SSF51230 72 147 1.01E-19 T 14-09-2016 IPR011053 Single hybrid motif AY555_RS09235 2159d79b343d149c19c34c4586dc866e 147 PANTHER PTHR23151:SF64 6 143 5.4E-19 T 14-09-2016 AY555_RS09235 2159d79b343d149c19c34c4586dc866e 147 Gene3D G3DSA:2.40.50.100 71 147 1.1E-23 T 14-09-2016 AY555_RS09235 2159d79b343d149c19c34c4586dc866e 147 Pfam PF00364 Biotin-requiring enzyme 74 146 3.7E-15 T 14-09-2016 IPR000089 Biotin/lipoyl attachment AY555_RS09235 2159d79b343d149c19c34c4586dc866e 147 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 93 107 9.6E-7 T 14-09-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 AY555_RS09235 2159d79b343d149c19c34c4586dc866e 147 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 76 89 9.6E-7 T 14-09-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 AY555_RS09235 2159d79b343d149c19c34c4586dc866e 147 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 108 121 9.6E-7 T 14-09-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 AY555_RS09235 2159d79b343d149c19c34c4586dc866e 147 PANTHER PTHR23151 6 143 5.4E-19 T 14-09-2016 AY555_RS09235 2159d79b343d149c19c34c4586dc866e 147 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 103 120 - T 14-09-2016 IPR001882 Biotin-binding site AY555_RS01170 13c773ade1f67a4a25350b87035ae91a 299 PANTHER PTHR21091:SF31 148 279 1.3E-36 T 14-09-2016 AY555_RS01170 13c773ade1f67a4a25350b87035ae91a 299 PANTHER PTHR21091 148 279 1.3E-36 T 14-09-2016 AY555_RS01170 13c773ade1f67a4a25350b87035ae91a 299 SUPERFAMILY SSF51730 15 293 4.32E-98 T 14-09-2016 IPR029041 FAD-linked oxidoreductase-like AY555_RS01170 13c773ade1f67a4a25350b87035ae91a 299 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 18 289 8.4E-105 T 14-09-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 AY555_RS01170 13c773ade1f67a4a25350b87035ae91a 299 Pfam PF02219 Methylenetetrahydrofolate reductase 14 290 8.7E-98 T 14-09-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 AY555_RS01170 13c773ade1f67a4a25350b87035ae91a 299 Gene3D G3DSA:3.20.20.220 12 293 1.5E-105 T 14-09-2016 IPR029041 FAD-linked oxidoreductase-like AY555_RS08930 aac13af52b05471cfb75cb7762dff9dd 264 PANTHER PTHR22854:SF2 1 261 1.7E-103 T 14-09-2016 AY555_RS08930 aac13af52b05471cfb75cb7762dff9dd 264 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 259 4.3E-94 T 14-09-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 AY555_RS08930 aac13af52b05471cfb75cb7762dff9dd 264 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 56 74 - T 14-09-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 AY555_RS08930 aac13af52b05471cfb75cb7762dff9dd 264 Gene3D G3DSA:3.20.20.70 1 261 3.0E-97 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS08930 aac13af52b05471cfb75cb7762dff9dd 264 PANTHER PTHR22854 1 261 1.7E-103 T 14-09-2016 AY555_RS08930 aac13af52b05471cfb75cb7762dff9dd 264 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 263 34.637 T 14-09-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 AY555_RS08930 aac13af52b05471cfb75cb7762dff9dd 264 SUPERFAMILY SSF51366 13 261 5.77E-85 T 14-09-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 SUPERFAMILY SSF51120 235 297 3.56E-11 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 685 703 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 Pfam PF08548 Peptidase M10 serralysin C terminal 376 550 2.7E-4 T 14-09-2016 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 SUPERFAMILY SSF51120 52 232 2.05E-24 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 658 676 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 312 330 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 SUPERFAMILY SSF51120 289 348 3.01E-16 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 321 339 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 703 721 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 Gene3D G3DSA:2.150.10.10 378 447 9.2E-10 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 Gene3D G3DSA:2.150.10.10 637 787 3.4E-33 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 Gene3D G3DSA:2.150.10.10 109 220 2.6E-23 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 Gene3D G3DSA:2.150.10.10 42 108 1.8E-10 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 Gene3D G3DSA:2.150.10.10 226 358 1.8E-28 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 Gene3D G3DSA:2.150.10.10 450 592 1.1E-27 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 194 212 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 SUPERFAMILY SSF51120 376 582 1.27E-33 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 276 294 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 PRINTS PR00313 NodO calcium binding signature 123 134 6.7E-10 T 14-09-2016 AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 PRINTS PR00313 NodO calcium binding signature 171 179 6.7E-10 T 14-09-2016 AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 PRINTS PR00313 NodO calcium binding signature 207 216 6.7E-10 T 14-09-2016 AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 PRINTS PR00313 NodO calcium binding signature 180 188 6.7E-10 T 14-09-2016 AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 503 521 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 167 185 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 649 667 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 694 712 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 303 321 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 158 176 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 494 512 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 294 312 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 325 340 0.025 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 644 660 0.036 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 498 514 0.0032 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 198 212 3.3 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 662 678 0.0024 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 271 287 0.39 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 306 323 2.6E-4 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 52 69 0.11 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 398 413 0.32 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 71 86 0.05 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 253 269 0.049 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 162 178 6.9E-4 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 379 396 5.2 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 288 305 0.011 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 126 136 17.0 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 462 478 7.8 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 480 496 0.012 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 706 723 0.0086 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 144 160 0.7 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 180 196 0.18 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 688 705 0.014 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 SUPERFAMILY SSF51120 627 803 1.05E-30 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 676 694 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 285 303 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS03900 7d09ba6e0cadf31904046fd35350f1f6 949 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 476 494 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS02405 36fecd14782069c87b8428409b292f3e 158 PRINTS PR00502 NUDIX hydrolase family signature 51 66 8.3E-6 T 14-09-2016 IPR020476 NUDIX hydrolase AY555_RS02405 36fecd14782069c87b8428409b292f3e 158 PRINTS PR00502 NUDIX hydrolase family signature 37 51 8.3E-6 T 14-09-2016 IPR020476 NUDIX hydrolase AY555_RS02405 36fecd14782069c87b8428409b292f3e 158 Gene3D G3DSA:3.90.79.10 6 122 3.8E-26 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AY555_RS02405 36fecd14782069c87b8428409b292f3e 158 ProSitePatterns PS00893 Nudix box signature. 42 63 - T 14-09-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AY555_RS02405 36fecd14782069c87b8428409b292f3e 158 PANTHER PTHR22769 5 120 3.9E-23 T 14-09-2016 AY555_RS02405 36fecd14782069c87b8428409b292f3e 158 SUPERFAMILY SSF55811 5 123 1.35E-28 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AY555_RS02405 36fecd14782069c87b8428409b292f3e 158 Pfam PF00293 NUDIX domain 11 121 3.4E-17 T 14-09-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AY555_RS04135 ecd4567aa142d288f72615de0743b783 342 PANTHER PTHR22912 1 312 1.2E-84 T 14-09-2016 AY555_RS04135 ecd4567aa142d288f72615de0743b783 342 Hamap MF_01685 Ferredoxin--NADP reductase. 7 334 40.655 T 14-09-2016 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101|MetaCyc: PWY-7230 AY555_RS04135 ecd4567aa142d288f72615de0743b783 342 Gene3D G3DSA:3.50.50.60 240 316 2.5E-6 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS04135 ecd4567aa142d288f72615de0743b783 342 Gene3D G3DSA:3.50.50.60 6 132 9.2E-28 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS04135 ecd4567aa142d288f72615de0743b783 342 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 298 9.5E-27 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS04135 ecd4567aa142d288f72615de0743b783 342 Gene3D G3DSA:3.50.50.60 133 239 3.4E-21 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS04135 ecd4567aa142d288f72615de0743b783 342 SUPERFAMILY SSF51905 2 316 6.33E-38 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS04135 ecd4567aa142d288f72615de0743b783 342 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 113 131 4.4E-14 T 14-09-2016 AY555_RS04135 ecd4567aa142d288f72615de0743b783 342 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 157 175 4.4E-14 T 14-09-2016 AY555_RS04135 ecd4567aa142d288f72615de0743b783 342 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 4.4E-14 T 14-09-2016 AY555_RS04135 ecd4567aa142d288f72615de0743b783 342 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 271 293 4.4E-14 T 14-09-2016 AY555_RS04135 ecd4567aa142d288f72615de0743b783 342 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 66 76 1.4E-22 T 14-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AY555_RS04135 ecd4567aa142d288f72615de0743b783 342 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 153 177 1.4E-22 T 14-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AY555_RS04135 ecd4567aa142d288f72615de0743b783 342 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 281 299 1.4E-22 T 14-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AY555_RS04135 ecd4567aa142d288f72615de0743b783 342 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 9 31 1.4E-22 T 14-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AY555_RS04135 ecd4567aa142d288f72615de0743b783 342 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 114 122 1.4E-22 T 14-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AY555_RS04135 ecd4567aa142d288f72615de0743b783 342 PANTHER PTHR22912:SF158 1 312 1.2E-84 T 14-09-2016 AY555_RS06465 6c68b416d65535fad2adceae2fd7894d 772 SUPERFAMILY SSF52540 424 649 2.88E-22 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS06465 6c68b416d65535fad2adceae2fd7894d 772 Pfam PF13481 AAA domain 413 599 2.2E-33 T 14-09-2016 AY555_RS06465 6c68b416d65535fad2adceae2fd7894d 772 Gene3D G3DSA:3.40.50.300 406 658 1.9E-40 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08150 52f76b6b545e43f8004cb1c61c2f5d39 144 PANTHER PTHR30345 1 143 1.6E-55 T 14-09-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 AY555_RS08150 52f76b6b545e43f8004cb1c61c2f5d39 144 Gene3D G3DSA:3.40.1400.10 2 143 1.5E-56 T 14-09-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 AY555_RS08150 52f76b6b545e43f8004cb1c61c2f5d39 144 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 6 144 8.9E-49 T 14-09-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 AY555_RS08150 52f76b6b545e43f8004cb1c61c2f5d39 144 SUPERFAMILY SSF89623 5 143 4.05E-51 T 14-09-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 AY555_RS08150 52f76b6b545e43f8004cb1c61c2f5d39 144 PIRSF PIRSF005384 4 144 2.4E-51 T 14-09-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 AY555_RS08150 52f76b6b545e43f8004cb1c61c2f5d39 144 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 6 144 2.7E-47 T 14-09-2016 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 AY555_RS08150 52f76b6b545e43f8004cb1c61c2f5d39 144 Pfam PF02502 Ribose/Galactose Isomerase 6 143 2.3E-50 T 14-09-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 AY555_RS07400 813088e584fa0155509a073f8907ae83 633 Gene3D G3DSA:3.30.70.1230 442 614 3.9E-34 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AY555_RS07400 813088e584fa0155509a073f8907ae83 633 SUPERFAMILY SSF55073 441 610 2.51E-43 T 14-09-2016 IPR029787 Nucleotide cyclase AY555_RS07400 813088e584fa0155509a073f8907ae83 633 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 442 604 2.2E-15 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AY555_RS07400 813088e584fa0155509a073f8907ae83 633 PANTHER PTHR11920:SF341 446 632 2.4E-19 T 14-09-2016 AY555_RS07400 813088e584fa0155509a073f8907ae83 633 SMART SM00044 367 589 6.7E-5 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AY555_RS07400 813088e584fa0155509a073f8907ae83 633 PANTHER PTHR11920 446 632 2.4E-19 T 14-09-2016 AY555_RS08720 e6a9187bba18004aaf1e2d20f8c02436 202 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 18 168 7.2E-39 T 14-09-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 AY555_RS08720 e6a9187bba18004aaf1e2d20f8c02436 202 PANTHER PTHR33269 1 199 2.4E-60 T 14-09-2016 AY555_RS08720 e6a9187bba18004aaf1e2d20f8c02436 202 PANTHER PTHR33269:SF4 1 199 2.4E-60 T 14-09-2016 AY555_RS05685 586b3faae156eea4339ffab24f4fdfd2 277 Pfam PF05853 beta-keto acid cleavage enzyme 4 273 8.4E-79 T 14-09-2016 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00600+2.3.1.24|UniPathway: UPA00870 AY555_RS05685 586b3faae156eea4339ffab24f4fdfd2 277 PANTHER PTHR37418:SF2 2 276 9.6E-91 T 14-09-2016 AY555_RS05685 586b3faae156eea4339ffab24f4fdfd2 277 PANTHER PTHR37418 2 276 9.6E-91 T 14-09-2016 AY555_RS05685 586b3faae156eea4339ffab24f4fdfd2 277 Gene3D G3DSA:3.20.20.70 1 275 2.9E-88 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS00950 fe9e467f9303bc123870312457b5ac6b 279 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 119 1.1E-31 T 14-09-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00950 fe9e467f9303bc123870312457b5ac6b 279 SMART SM01382 125 253 5.2E-96 T 14-09-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AY555_RS00950 fe9e467f9303bc123870312457b5ac6b 279 SMART SM01383 42 119 9.7E-45 T 14-09-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00950 fe9e467f9303bc123870312457b5ac6b 279 SUPERFAMILY SSF50249 2 126 9.6E-48 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS00950 fe9e467f9303bc123870312457b5ac6b 279 PANTHER PTHR13691 1 279 2.2E-143 T 14-09-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00950 fe9e467f9303bc123870312457b5ac6b 279 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 251 7.0E-59 T 14-09-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AY555_RS00950 fe9e467f9303bc123870312457b5ac6b 279 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 274 7.8E-128 T 14-09-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AY555_RS00950 fe9e467f9303bc123870312457b5ac6b 279 PIRSF PIRSF002158 5 276 5.6E-103 T 14-09-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00950 fe9e467f9303bc123870312457b5ac6b 279 ProSitePatterns PS00467 Ribosomal protein L2 signature. 219 230 - T 14-09-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 AY555_RS00950 fe9e467f9303bc123870312457b5ac6b 279 PANTHER PTHR13691:SF5 1 279 2.2E-143 T 14-09-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AY555_RS00950 fe9e467f9303bc123870312457b5ac6b 279 Gene3D G3DSA:4.10.950.10 197 273 1.9E-35 T 14-09-2016 IPR014726 Ribosomal protein L2, domain 3 AY555_RS00950 fe9e467f9303bc123870312457b5ac6b 279 SUPERFAMILY SSF50104 127 272 4.03E-62 T 14-09-2016 IPR008991 Translation protein SH3-like domain AY555_RS00950 fe9e467f9303bc123870312457b5ac6b 279 Gene3D G3DSA:2.40.50.140 1 115 1.8E-49 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS00950 fe9e467f9303bc123870312457b5ac6b 279 Gene3D G3DSA:2.30.30.30 121 196 1.2E-33 T 14-09-2016 IPR014722 Ribosomal protein L2 domain 2 AY555_RS00950 fe9e467f9303bc123870312457b5ac6b 279 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 274 47.181 T 14-09-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AY555_RS06025 56cec6e007dd4db4ed08d1582e94031f 638 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 254 272 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS06025 56cec6e007dd4db4ed08d1582e94031f 638 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 478 496 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS06025 56cec6e007dd4db4ed08d1582e94031f 638 PRINTS PR00313 NodO calcium binding signature 258 266 6.2E-10 T 14-09-2016 AY555_RS06025 56cec6e007dd4db4ed08d1582e94031f 638 PRINTS PR00313 NodO calcium binding signature 276 285 6.2E-10 T 14-09-2016 AY555_RS06025 56cec6e007dd4db4ed08d1582e94031f 638 PRINTS PR00313 NodO calcium binding signature 228 239 6.2E-10 T 14-09-2016 AY555_RS06025 56cec6e007dd4db4ed08d1582e94031f 638 PRINTS PR00313 NodO calcium binding signature 267 275 6.2E-10 T 14-09-2016 AY555_RS06025 56cec6e007dd4db4ed08d1582e94031f 638 SUPERFAMILY SSF51120 148 352 8.22E-27 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS06025 56cec6e007dd4db4ed08d1582e94031f 638 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 505 523 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS06025 56cec6e007dd4db4ed08d1582e94031f 638 Gene3D G3DSA:2.150.10.10 438 563 5.0E-23 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS06025 56cec6e007dd4db4ed08d1582e94031f 638 Gene3D G3DSA:2.150.10.10 161 351 1.7E-26 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS06025 56cec6e007dd4db4ed08d1582e94031f 638 SUPERFAMILY SSF51120 445 607 2.35E-24 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS06025 56cec6e007dd4db4ed08d1582e94031f 638 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 496 514 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS06025 56cec6e007dd4db4ed08d1582e94031f 638 Pfam PF08548 Peptidase M10 serralysin C terminal 184 348 5.0E-5 T 14-09-2016 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 AY555_RS06025 56cec6e007dd4db4ed08d1582e94031f 638 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 263 281 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS06025 56cec6e007dd4db4ed08d1582e94031f 638 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 487 505 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS06025 56cec6e007dd4db4ed08d1582e94031f 638 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 508 524 0.074 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS06025 56cec6e007dd4db4ed08d1582e94031f 638 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 166 180 2.1 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS06025 56cec6e007dd4db4ed08d1582e94031f 638 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 455 471 12.0 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS06025 56cec6e007dd4db4ed08d1582e94031f 638 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 230 243 0.58 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS06025 56cec6e007dd4db4ed08d1582e94031f 638 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 472 489 1.5 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS06025 56cec6e007dd4db4ed08d1582e94031f 638 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 249 265 1.9 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS06025 56cec6e007dd4db4ed08d1582e94031f 638 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 490 507 0.042 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS06025 56cec6e007dd4db4ed08d1582e94031f 638 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 267 282 0.3 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS06025 56cec6e007dd4db4ed08d1582e94031f 638 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 294 360 2.3E-5 T 14-09-2016 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass AY555_RS10310 909e43e909a23965e44403162b118a27 347 Gene3D G3DSA:1.25.40.10 142 169 7.9E-8 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS10310 909e43e909a23965e44403162b118a27 347 Gene3D G3DSA:1.25.40.10 32 102 7.9E-8 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS10310 909e43e909a23965e44403162b118a27 347 Gene3D G3DSA:1.25.40.10 211 251 7.9E-8 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS10310 909e43e909a23965e44403162b118a27 347 SUPERFAMILY SSF48452 30 95 4.93E-7 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS10310 909e43e909a23965e44403162b118a27 347 SUPERFAMILY SSF48452 135 244 4.93E-7 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS07475 a216074c301b790771d41b1efa181498 169 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 150 1.0E-49 T 14-09-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AY555_RS07475 a216074c301b790771d41b1efa181498 169 Gene3D G3DSA:3.30.420.10 2 156 3.2E-61 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AY555_RS07475 a216074c301b790771d41b1efa181498 169 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 14-09-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 AY555_RS07475 a216074c301b790771d41b1efa181498 169 SUPERFAMILY SSF53098 2 155 1.64E-52 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AY555_RS07475 a216074c301b790771d41b1efa181498 169 PANTHER PTHR30194 1 169 1.4E-65 T 14-09-2016 AY555_RS07475 a216074c301b790771d41b1efa181498 169 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 1.2E-34 T 14-09-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AY555_RS07475 a216074c301b790771d41b1efa181498 169 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 1.2E-34 T 14-09-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AY555_RS07475 a216074c301b790771d41b1efa181498 169 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 1.2E-34 T 14-09-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AY555_RS07475 a216074c301b790771d41b1efa181498 169 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 1.2E-34 T 14-09-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AY555_RS07475 a216074c301b790771d41b1efa181498 169 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 1.2E-34 T 14-09-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AY555_RS07475 a216074c301b790771d41b1efa181498 169 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 153 46.911 T 14-09-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AY555_RS07475 a216074c301b790771d41b1efa181498 169 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 158 7.9E-47 T 14-09-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AY555_RS01865 81d9c4c45b632fcb70f1bc249f46b900 238 Gene3D G3DSA:3.40.50.880 2 236 1.8E-52 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AY555_RS01865 81d9c4c45b632fcb70f1bc249f46b900 238 PANTHER PTHR11922:SF18 28 236 1.2E-46 T 14-09-2016 AY555_RS01865 81d9c4c45b632fcb70f1bc249f46b900 238 PANTHER PTHR11922 28 236 1.2E-46 T 14-09-2016 AY555_RS01865 81d9c4c45b632fcb70f1bc249f46b900 238 Pfam PF07722 Peptidase C26 4 217 6.9E-62 T 14-09-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 AY555_RS01865 81d9c4c45b632fcb70f1bc249f46b900 238 SUPERFAMILY SSF52317 24 235 8.03E-42 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AY555_RS08265 d137dc61ea28640cdb26824475d6f5f2 305 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 205 211 - T 14-09-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AY555_RS08265 d137dc61ea28640cdb26824475d6f5f2 305 Gene3D G3DSA:1.10.8.10 9 100 3.3E-5 T 14-09-2016 AY555_RS08265 d137dc61ea28640cdb26824475d6f5f2 305 Pfam PF05175 Methyltransferase small domain 135 215 4.8E-16 T 14-09-2016 IPR007848 Methyltransferase small domain GO:0008168 AY555_RS08265 d137dc61ea28640cdb26824475d6f5f2 305 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 8 296 2.3E-115 T 14-09-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AY555_RS08265 d137dc61ea28640cdb26824475d6f5f2 305 Gene3D G3DSA:3.40.50.150 129 285 4.4E-48 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS08265 d137dc61ea28640cdb26824475d6f5f2 305 SUPERFAMILY SSF53335 10 285 1.81E-45 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS08265 d137dc61ea28640cdb26824475d6f5f2 305 PIRSF PIRSF037167 1 305 2.3E-114 T 14-09-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AY555_RS08265 d137dc61ea28640cdb26824475d6f5f2 305 PANTHER PTHR18895 1 301 1.2E-120 T 14-09-2016 AY555_RS08265 d137dc61ea28640cdb26824475d6f5f2 305 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 9 297 5.4E-65 T 14-09-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AY555_RS08265 d137dc61ea28640cdb26824475d6f5f2 305 PANTHER PTHR18895:SF66 1 301 1.2E-120 T 14-09-2016 AY555_RS01285 e46aeea6fafaee8225a81800d7f82d4a 395 SUPERFAMILY SSF52317 171 382 2.38E-56 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AY555_RS01285 e46aeea6fafaee8225a81800d7f82d4a 395 PANTHER PTHR11405 16 384 7.2E-181 T 14-09-2016 AY555_RS01285 e46aeea6fafaee8225a81800d7f82d4a 395 SMART SM01097 16 146 7.8E-74 T 14-09-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AY555_RS01285 e46aeea6fafaee8225a81800d7f82d4a 395 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 197 211 1.0E-38 T 14-09-2016 AY555_RS01285 e46aeea6fafaee8225a81800d7f82d4a 395 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 310 321 1.0E-38 T 14-09-2016 AY555_RS01285 e46aeea6fafaee8225a81800d7f82d4a 395 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 268 284 1.0E-38 T 14-09-2016 AY555_RS01285 e46aeea6fafaee8225a81800d7f82d4a 395 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 285 302 1.0E-38 T 14-09-2016 AY555_RS01285 e46aeea6fafaee8225a81800d7f82d4a 395 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 236 250 1.0E-38 T 14-09-2016 AY555_RS01285 e46aeea6fafaee8225a81800d7f82d4a 395 Gene3D G3DSA:3.40.50.880 169 381 3.4E-72 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AY555_RS01285 e46aeea6fafaee8225a81800d7f82d4a 395 PRINTS PR00096 Glutamine amidotransferase superfamily signature 268 279 1.7E-12 T 14-09-2016 AY555_RS01285 e46aeea6fafaee8225a81800d7f82d4a 395 PRINTS PR00096 Glutamine amidotransferase superfamily signature 239 248 1.7E-12 T 14-09-2016 AY555_RS01285 e46aeea6fafaee8225a81800d7f82d4a 395 PRINTS PR00096 Glutamine amidotransferase superfamily signature 353 366 1.7E-12 T 14-09-2016 AY555_RS01285 e46aeea6fafaee8225a81800d7f82d4a 395 SUPERFAMILY SSF52021 18 159 4.32E-51 T 14-09-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AY555_RS01285 e46aeea6fafaee8225a81800d7f82d4a 395 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 16 382 45.254 T 14-09-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AY555_RS01285 e46aeea6fafaee8225a81800d7f82d4a 395 Gene3D G3DSA:3.50.30.20 18 157 5.3E-52 T 14-09-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AY555_RS01285 e46aeea6fafaee8225a81800d7f82d4a 395 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 19 379 7.0E-136 T 14-09-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AY555_RS01285 e46aeea6fafaee8225a81800d7f82d4a 395 PRINTS PR00097 Anthranilate synthase component II signature 353 366 3.6E-7 T 14-09-2016 AY555_RS01285 e46aeea6fafaee8225a81800d7f82d4a 395 PRINTS PR00097 Anthranilate synthase component II signature 239 248 3.6E-7 T 14-09-2016 AY555_RS01285 e46aeea6fafaee8225a81800d7f82d4a 395 PRINTS PR00097 Anthranilate synthase component II signature 268 279 3.6E-7 T 14-09-2016 AY555_RS01285 e46aeea6fafaee8225a81800d7f82d4a 395 Pfam PF00117 Glutamine amidotransferase class-I 200 375 7.6E-43 T 14-09-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 AY555_RS01285 e46aeea6fafaee8225a81800d7f82d4a 395 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 18 145 2.0E-45 T 14-09-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AY555_RS00490 6db5b584a7fa60ebac7a7dace574b758 378 PANTHER PTHR33529 1 297 1.7E-49 T 14-09-2016 AY555_RS00490 6db5b584a7fa60ebac7a7dace574b758 378 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 4 360 2.0E-70 T 14-09-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 AY555_RS00490 6db5b584a7fa60ebac7a7dace574b758 378 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 357 1.5E-63 T 14-09-2016 IPR005495 Permease LptG/LptF-related GO:0016021 AY555_RS00490 6db5b584a7fa60ebac7a7dace574b758 378 PANTHER PTHR33529:SF2 1 297 1.7E-49 T 14-09-2016 AY555_RS02650 a3b8a3becc81d7adc6d58c7ec2239ab4 112 Pfam PF09538 Protein of unknown function (FYDLN_acid) 2 99 1.5E-21 T 14-09-2016 IPR012644 Conserved hypothetical protein CHP02300, FYDLN acid AY555_RS05835 03706cd1110fdd852ce9212124d45df1 267 PANTHER PTHR30188:SF4 5 265 8.0E-96 T 14-09-2016 AY555_RS05835 03706cd1110fdd852ce9212124d45df1 267 Pfam PF02405 Permease MlaE 52 262 8.8E-79 T 14-09-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 AY555_RS05835 03706cd1110fdd852ce9212124d45df1 267 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 25 265 3.9E-77 T 14-09-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria AY555_RS05835 03706cd1110fdd852ce9212124d45df1 267 PANTHER PTHR30188 5 265 8.0E-96 T 14-09-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 AY555_RS05440 8619a309dae9a8caad4aa849ec0ccf1d 101 Hamap MF_00634 UPF0235 protein YggU [yggU]. 5 97 17.256 T 14-09-2016 IPR003746 Protein of unknown function DUF167 AY555_RS05440 8619a309dae9a8caad4aa849ec0ccf1d 101 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 8 84 2.9E-24 T 14-09-2016 IPR003746 Protein of unknown function DUF167 AY555_RS05440 8619a309dae9a8caad4aa849ec0ccf1d 101 SMART SM01152 5 86 7.6E-30 T 14-09-2016 IPR003746 Protein of unknown function DUF167 AY555_RS05440 8619a309dae9a8caad4aa849ec0ccf1d 101 SUPERFAMILY SSF69786 3 89 1.96E-22 T 14-09-2016 IPR003746 Protein of unknown function DUF167 AY555_RS05440 8619a309dae9a8caad4aa849ec0ccf1d 101 Gene3D G3DSA:3.30.1200.10 4 89 2.0E-23 T 14-09-2016 IPR003746 Protein of unknown function DUF167 AY555_RS08015 97fe10ba6f326d0473d84acada1ae634 244 PANTHER PTHR33991 3 194 1.9E-17 T 14-09-2016 AY555_RS08015 97fe10ba6f326d0473d84acada1ae634 244 ProDom PD202328 DNA REPAIR RECOMBINATION RECO DAMAGE O O RECO-RELATED RECOMBINATIONAL RP549 135 221 1.0E-14 T 14-09-2016 AY555_RS08015 97fe10ba6f326d0473d84acada1ae634 244 SUPERFAMILY SSF57863 94 186 6.28E-9 T 14-09-2016 AY555_RS08015 97fe10ba6f326d0473d84acada1ae634 244 Pfam PF02565 Recombination protein O C terminal 91 225 4.1E-22 T 14-09-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AY555_RS08015 97fe10ba6f326d0473d84acada1ae634 244 Hamap MF_00201 DNA repair protein RecO [recO]. 3 240 15.598 T 14-09-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AY555_RS08015 97fe10ba6f326d0473d84acada1ae634 244 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 180 3.4E-21 T 14-09-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AY555_RS08015 97fe10ba6f326d0473d84acada1ae634 244 Pfam PF11967 Recombination protein O N terminal 1 75 1.4E-8 T 14-09-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal AY555_RS06955 cfb18636e75f0b3465acf9cdb183aa3f 228 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 228 27.207 T 14-09-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 AY555_RS06955 cfb18636e75f0b3465acf9cdb183aa3f 228 PANTHER PTHR19278 18 216 4.9E-42 T 14-09-2016 AY555_RS06955 cfb18636e75f0b3465acf9cdb183aa3f 228 SUPERFAMILY SSF53271 16 222 1.44E-46 T 14-09-2016 IPR029057 Phosphoribosyltransferase-like AY555_RS06955 cfb18636e75f0b3465acf9cdb183aa3f 228 Pfam PF00156 Phosphoribosyl transferase domain 56 163 6.9E-13 T 14-09-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 AY555_RS06955 cfb18636e75f0b3465acf9cdb183aa3f 228 Gene3D G3DSA:3.40.50.2020 13 220 5.4E-47 T 14-09-2016 IPR029057 Phosphoribosyltransferase-like AY555_RS04665 b9f1efbc86b07e6725fca6f28778e3dd 75 PANTHER PTHR10031 3 75 2.4E-19 T 14-09-2016 AY555_RS04665 b9f1efbc86b07e6725fca6f28778e3dd 75 Gene3D G3DSA:1.20.20.10 6 73 3.4E-20 T 14-09-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 AY555_RS04665 b9f1efbc86b07e6725fca6f28778e3dd 75 SUPERFAMILY SSF81333 4 74 8.76E-16 T 14-09-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AY555_RS04665 b9f1efbc86b07e6725fca6f28778e3dd 75 ProSitePatterns PS00605 ATP synthase c subunit signature. 37 58 - T 14-09-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site AY555_RS04665 b9f1efbc86b07e6725fca6f28778e3dd 75 Hamap MF_01396 ATP synthase subunit c [atpH]. 7 74 14.373 T 14-09-2016 AY555_RS04665 b9f1efbc86b07e6725fca6f28778e3dd 75 Pfam PF00137 ATP synthase subunit C 9 70 1.9E-12 T 14-09-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AY555_RS04665 b9f1efbc86b07e6725fca6f28778e3dd 75 PRINTS PR00124 ATP synthase C subunit signature 9 28 2.7E-25 T 14-09-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 AY555_RS04665 b9f1efbc86b07e6725fca6f28778e3dd 75 PRINTS PR00124 ATP synthase C subunit signature 30 45 2.7E-25 T 14-09-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 AY555_RS04665 b9f1efbc86b07e6725fca6f28778e3dd 75 PRINTS PR00124 ATP synthase C subunit signature 47 72 2.7E-25 T 14-09-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 AY555_RS07695 af3825d9a4dd8d861c90c4c342f2237b 373 Gene3D G3DSA:3.40.50.450 4 226 2.8E-57 T 14-09-2016 AY555_RS07695 af3825d9a4dd8d861c90c4c342f2237b 373 ProSitePatterns PS00433 Phosphofructokinase signature. 279 297 - T 14-09-2016 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS07695 af3825d9a4dd8d861c90c4c342f2237b 373 Hamap MF_01976 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 5 360 39.176 T 14-09-2016 IPR012829 Phosphofructokinase, mixed-substrate PFK group III GO:0006096|GO:0047334 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 AY555_RS07695 af3825d9a4dd8d861c90c4c342f2237b 373 Pfam PF00365 Phosphofructokinase 7 310 5.5E-89 T 14-09-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS07695 af3825d9a4dd8d861c90c4c342f2237b 373 PANTHER PTHR13697 7 347 7.3E-91 T 14-09-2016 AY555_RS07695 af3825d9a4dd8d861c90c4c342f2237b 373 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 108 124 1.7E-69 T 14-09-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS07695 af3825d9a4dd8d861c90c4c342f2237b 373 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 9 28 1.7E-69 T 14-09-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS07695 af3825d9a4dd8d861c90c4c342f2237b 373 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 192 209 1.7E-69 T 14-09-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS07695 af3825d9a4dd8d861c90c4c342f2237b 373 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 174 190 1.7E-69 T 14-09-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS07695 af3825d9a4dd8d861c90c4c342f2237b 373 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 136 153 1.7E-69 T 14-09-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS07695 af3825d9a4dd8d861c90c4c342f2237b 373 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 35 48 1.7E-69 T 14-09-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS07695 af3825d9a4dd8d861c90c4c342f2237b 373 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 154 172 1.7E-69 T 14-09-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS07695 af3825d9a4dd8d861c90c4c342f2237b 373 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 275 297 1.7E-69 T 14-09-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS07695 af3825d9a4dd8d861c90c4c342f2237b 373 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 228 240 1.7E-69 T 14-09-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS07695 af3825d9a4dd8d861c90c4c342f2237b 373 SUPERFAMILY SSF53784 5 347 1.29E-97 T 14-09-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS07695 af3825d9a4dd8d861c90c4c342f2237b 373 PIRSF PIRSF000532 3 361 2.5E-111 T 14-09-2016 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 AY555_RS07840 a44c02dc6e91e6c1d3f7ac49fbc3d40c 376 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 52 361 5.2E-71 T 14-09-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AY555_RS07840 a44c02dc6e91e6c1d3f7ac49fbc3d40c 376 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 276 4.5E-22 T 14-09-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AY555_RS07840 a44c02dc6e91e6c1d3f7ac49fbc3d40c 376 Gene3D G3DSA:2.40.50.100 78 110 5.7E-11 T 14-09-2016 AY555_RS07840 a44c02dc6e91e6c1d3f7ac49fbc3d40c 376 Gene3D G3DSA:2.40.50.100 171 202 5.7E-11 T 14-09-2016 AY555_RS07840 a44c02dc6e91e6c1d3f7ac49fbc3d40c 376 SUPERFAMILY SSF111369 66 283 5.36E-32 T 14-09-2016 AY555_RS07840 a44c02dc6e91e6c1d3f7ac49fbc3d40c 376 PANTHER PTHR30469:SF11 5 372 1.7E-98 T 14-09-2016 AY555_RS07840 a44c02dc6e91e6c1d3f7ac49fbc3d40c 376 PANTHER PTHR30469 5 372 1.7E-98 T 14-09-2016 AY555_RS05540 983cc8146da87332be56372e1f9903c6 96 SMART SM00883 2 94 2.8E-58 T 14-09-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AY555_RS05540 983cc8146da87332be56372e1f9903c6 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 26.899 T 14-09-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AY555_RS05540 983cc8146da87332be56372e1f9903c6 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 94 5.4E-35 T 14-09-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AY555_RS05540 983cc8146da87332be56372e1f9903c6 96 PRINTS PR00297 10kDa chaperonin signature 81 94 1.7E-33 T 14-09-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AY555_RS05540 983cc8146da87332be56372e1f9903c6 96 PRINTS PR00297 10kDa chaperonin signature 3 18 1.7E-33 T 14-09-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AY555_RS05540 983cc8146da87332be56372e1f9903c6 96 PRINTS PR00297 10kDa chaperonin signature 25 46 1.7E-33 T 14-09-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AY555_RS05540 983cc8146da87332be56372e1f9903c6 96 PRINTS PR00297 10kDa chaperonin signature 60 72 1.7E-33 T 14-09-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AY555_RS05540 983cc8146da87332be56372e1f9903c6 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 14-09-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 AY555_RS05540 983cc8146da87332be56372e1f9903c6 96 SUPERFAMILY SSF50129 1 95 4.99E-35 T 14-09-2016 IPR011032 GroES-like AY555_RS05540 983cc8146da87332be56372e1f9903c6 96 PANTHER PTHR10772 1 95 4.9E-46 T 14-09-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AY555_RS05540 983cc8146da87332be56372e1f9903c6 96 Gene3D G3DSA:2.30.33.40 1 95 4.0E-38 T 14-09-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AY555_RS03340 2eaaf128b6f53b32dd12ae30a90df735 450 SMART SM00984 319 421 4.0E-14 T 14-09-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 AY555_RS03340 2eaaf128b6f53b32dd12ae30a90df735 450 PANTHER PTHR11374 1 398 5.3E-108 T 14-09-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 AY555_RS03340 2eaaf128b6f53b32dd12ae30a90df735 450 SUPERFAMILY SSF52413 312 423 2.49E-16 T 14-09-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 AY555_RS03340 2eaaf128b6f53b32dd12ae30a90df735 450 Gene3D G3DSA:1.20.5.100 206 234 8.0E-9 T 14-09-2016 AY555_RS03340 2eaaf128b6f53b32dd12ae30a90df735 450 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 187 1.1E-43 T 14-09-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 AY555_RS03340 2eaaf128b6f53b32dd12ae30a90df735 450 Gene3D G3DSA:3.40.50.720 237 425 7.3E-39 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS03340 2eaaf128b6f53b32dd12ae30a90df735 450 PIRSF PIRSF000124 1 433 1.3E-89 T 14-09-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 AY555_RS03340 2eaaf128b6f53b32dd12ae30a90df735 450 PIRSF PIRSF500134 1 434 2.2E-94 T 14-09-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 AY555_RS03340 2eaaf128b6f53b32dd12ae30a90df735 450 Gene3D G3DSA:3.40.50.720 1 190 5.8E-52 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS03340 2eaaf128b6f53b32dd12ae30a90df735 450 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 298 5.2E-25 T 14-09-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 AY555_RS03340 2eaaf128b6f53b32dd12ae30a90df735 450 SUPERFAMILY SSF48179 206 303 2.21E-19 T 14-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AY555_RS03340 2eaaf128b6f53b32dd12ae30a90df735 450 SUPERFAMILY SSF51735 1 191 1.29E-41 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS03340 2eaaf128b6f53b32dd12ae30a90df735 450 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 319 419 4.5E-17 T 14-09-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 AY555_RS03340 2eaaf128b6f53b32dd12ae30a90df735 450 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 414 1.9E-99 T 14-09-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 AY555_RS00255 37f57446ebda6d1e0fa4dfbf7dea48f1 288 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 111 279 2.2E-61 T 14-09-2016 IPR005273 Uracil-DNA glycosylase, family 4 domain AY555_RS00255 37f57446ebda6d1e0fa4dfbf7dea48f1 288 Gene3D G3DSA:3.40.470.10 99 284 7.4E-66 T 14-09-2016 IPR005122 Uracil-DNA glycosylase-like AY555_RS00255 37f57446ebda6d1e0fa4dfbf7dea48f1 288 SMART SM00987 124 276 1.4E-38 T 14-09-2016 AY555_RS00255 37f57446ebda6d1e0fa4dfbf7dea48f1 288 SMART SM00986 124 276 1.4E-38 T 14-09-2016 IPR005122 Uracil-DNA glycosylase-like AY555_RS00255 37f57446ebda6d1e0fa4dfbf7dea48f1 288 PANTHER PTHR33693 69 285 6.2E-67 T 14-09-2016 AY555_RS00255 37f57446ebda6d1e0fa4dfbf7dea48f1 288 PANTHER PTHR33693:SF1 69 285 6.2E-67 T 14-09-2016 AY555_RS00255 37f57446ebda6d1e0fa4dfbf7dea48f1 288 Pfam PF03167 Uracil DNA glycosylase superfamily 126 275 2.4E-43 T 14-09-2016 IPR005122 Uracil-DNA glycosylase-like AY555_RS00255 37f57446ebda6d1e0fa4dfbf7dea48f1 288 SUPERFAMILY SSF52141 96 279 9.48E-60 T 14-09-2016 IPR005122 Uracil-DNA glycosylase-like AY555_RS07845 34d7c110ec31afdd84c66fa781253095 1031 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 3.3E-76 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AY555_RS07845 34d7c110ec31afdd84c66fa781253095 1031 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 3.3E-76 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AY555_RS07845 34d7c110ec31afdd84c66fa781253095 1031 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 3.3E-76 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AY555_RS07845 34d7c110ec31afdd84c66fa781253095 1031 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 3.3E-76 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AY555_RS07845 34d7c110ec31afdd84c66fa781253095 1031 PRINTS PR00702 Acriflavin resistance protein family signature 539 556 3.3E-76 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AY555_RS07845 34d7c110ec31afdd84c66fa781253095 1031 PRINTS PR00702 Acriflavin resistance protein family signature 602 616 3.3E-76 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AY555_RS07845 34d7c110ec31afdd84c66fa781253095 1031 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.3E-76 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AY555_RS07845 34d7c110ec31afdd84c66fa781253095 1031 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.3E-76 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AY555_RS07845 34d7c110ec31afdd84c66fa781253095 1031 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 3.3E-76 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AY555_RS07845 34d7c110ec31afdd84c66fa781253095 1031 Gene3D G3DSA:3.30.70.1430 554 649 2.0E-9 T 14-09-2016 AY555_RS07845 34d7c110ec31afdd84c66fa781253095 1031 SUPERFAMILY SSF82714 184 265 5.49E-14 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AY555_RS07845 34d7c110ec31afdd84c66fa781253095 1031 Gene3D G3DSA:3.30.70.1430 42 139 1.2E-22 T 14-09-2016 AY555_RS07845 34d7c110ec31afdd84c66fa781253095 1031 Pfam PF00873 AcrB/AcrD/AcrF family 4 1002 1.9E-257 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AY555_RS07845 34d7c110ec31afdd84c66fa781253095 1031 SUPERFAMILY SSF82693 267 323 7.85E-20 T 14-09-2016 AY555_RS07845 34d7c110ec31afdd84c66fa781253095 1031 SUPERFAMILY SSF82693 139 181 7.85E-20 T 14-09-2016 AY555_RS07845 34d7c110ec31afdd84c66fa781253095 1031 Gene3D G3DSA:3.30.2090.10 696 785 2.8E-17 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AY555_RS07845 34d7c110ec31afdd84c66fa781253095 1031 Gene3D G3DSA:3.30.2090.10 183 266 2.1E-15 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AY555_RS07845 34d7c110ec31afdd84c66fa781253095 1031 SUPERFAMILY SSF82693 42 131 1.4E-20 T 14-09-2016 AY555_RS07845 34d7c110ec31afdd84c66fa781253095 1031 SUPERFAMILY SSF82866 290 489 1.19E-50 T 14-09-2016 AY555_RS07845 34d7c110ec31afdd84c66fa781253095 1031 SUPERFAMILY SSF82693 552 649 1.83E-15 T 14-09-2016 AY555_RS07845 34d7c110ec31afdd84c66fa781253095 1031 Gene3D G3DSA:1.10.3850.10 790 1004 1.2E-55 T 14-09-2016 AY555_RS07845 34d7c110ec31afdd84c66fa781253095 1031 Gene3D G3DSA:1.10.3850.10 275 490 1.4E-59 T 14-09-2016 AY555_RS07845 34d7c110ec31afdd84c66fa781253095 1031 PANTHER PTHR32063:SF28 1 1017 0.0 T 14-09-2016 AY555_RS07845 34d7c110ec31afdd84c66fa781253095 1031 SUPERFAMILY SSF82714 697 782 1.83E-15 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AY555_RS07845 34d7c110ec31afdd84c66fa781253095 1031 SUPERFAMILY SSF82866 780 1005 6.28E-45 T 14-09-2016 AY555_RS07845 34d7c110ec31afdd84c66fa781253095 1031 PANTHER PTHR32063 1 1017 0.0 T 14-09-2016 AY555_RS04245 cf87ad0dcfe0a705c5c8d1945655e3cc 234 SUPERFAMILY SSF109755 9 228 2.3E-68 T 14-09-2016 AY555_RS04245 cf87ad0dcfe0a705c5c8d1945655e3cc 234 PIRSF PIRSF003107 5 223 1.7E-64 T 14-09-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AY555_RS04245 cf87ad0dcfe0a705c5c8d1945655e3cc 234 Pfam PF01895 PhoU domain 23 109 2.3E-19 T 14-09-2016 IPR026022 PhoU domain AY555_RS04245 cf87ad0dcfe0a705c5c8d1945655e3cc 234 Pfam PF01895 PhoU domain 126 210 1.2E-19 T 14-09-2016 IPR026022 PhoU domain AY555_RS04245 cf87ad0dcfe0a705c5c8d1945655e3cc 234 PANTHER PTHR10010:SF14 4 234 6.8E-69 T 14-09-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AY555_RS04245 cf87ad0dcfe0a705c5c8d1945655e3cc 234 Gene3D G3DSA:1.20.58.220 123 225 6.3E-32 T 14-09-2016 AY555_RS04245 cf87ad0dcfe0a705c5c8d1945655e3cc 234 Gene3D G3DSA:1.20.58.220 7 119 2.5E-30 T 14-09-2016 AY555_RS04245 cf87ad0dcfe0a705c5c8d1945655e3cc 234 PANTHER PTHR10010 4 234 6.8E-69 T 14-09-2016 AY555_RS04245 cf87ad0dcfe0a705c5c8d1945655e3cc 234 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 10 219 1.2E-64 T 14-09-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AY555_RS00995 20aeb830b209a000252329324cb02d42 1410 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1380 10.426 T 14-09-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AY555_RS00995 20aeb830b209a000252329324cb02d42 1410 Pfam PF00623 RNA polymerase Rpb1, domain 2 393 486 1.2E-26 T 14-09-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AY555_RS00995 20aeb830b209a000252329324cb02d42 1410 Pfam PF00623 RNA polymerase Rpb1, domain 2 345 395 4.6E-8 T 14-09-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AY555_RS00995 20aeb830b209a000252329324cb02d42 1410 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 13 650 32.29 T 14-09-2016 AY555_RS00995 20aeb830b209a000252329324cb02d42 1410 SUPERFAMILY SSF64484 16 947 0.0 T 14-09-2016 AY555_RS00995 20aeb830b209a000252329324cb02d42 1410 SUPERFAMILY SSF64484 1134 1367 0.0 T 14-09-2016 AY555_RS00995 20aeb830b209a000252329324cb02d42 1410 PANTHER PTHR19376:SF32 1181 1266 0.0 T 14-09-2016 AY555_RS00995 20aeb830b209a000252329324cb02d42 1410 PANTHER PTHR19376:SF32 1307 1367 0.0 T 14-09-2016 AY555_RS00995 20aeb830b209a000252329324cb02d42 1410 PANTHER PTHR19376 1181 1266 0.0 T 14-09-2016 AY555_RS00995 20aeb830b209a000252329324cb02d42 1410 PANTHER PTHR19376 1307 1367 0.0 T 14-09-2016 AY555_RS00995 20aeb830b209a000252329324cb02d42 1410 SMART SM00663 236 515 2.6E-184 T 14-09-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AY555_RS00995 20aeb830b209a000252329324cb02d42 1410 PANTHER PTHR19376:SF32 4 946 0.0 T 14-09-2016 AY555_RS00995 20aeb830b209a000252329324cb02d42 1410 PANTHER PTHR19376 4 946 0.0 T 14-09-2016 AY555_RS00995 20aeb830b209a000252329324cb02d42 1410 Pfam PF05000 RNA polymerase Rpb1, domain 4 685 761 4.0E-16 T 14-09-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AY555_RS00995 20aeb830b209a000252329324cb02d42 1410 Pfam PF04998 RNA polymerase Rpb1, domain 5 769 1319 1.6E-73 T 14-09-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AY555_RS00995 20aeb830b209a000252329324cb02d42 1410 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 343 2.6E-89 T 14-09-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AY555_RS00995 20aeb830b209a000252329324cb02d42 1410 Gene3D G3DSA:2.40.40.20 350 377 4.3E-37 T 14-09-2016 AY555_RS00995 20aeb830b209a000252329324cb02d42 1410 Gene3D G3DSA:2.40.40.20 418 490 4.3E-37 T 14-09-2016 AY555_RS00995 20aeb830b209a000252329324cb02d42 1410 Gene3D G3DSA:2.40.50.100 1156 1214 1.9E-10 T 14-09-2016 AY555_RS00995 20aeb830b209a000252329324cb02d42 1410 PANTHER PTHR19376:SF32 965 1158 0.0 T 14-09-2016 AY555_RS00995 20aeb830b209a000252329324cb02d42 1410 PANTHER PTHR19376 965 1158 0.0 T 14-09-2016 AY555_RS00995 20aeb830b209a000252329324cb02d42 1410 Pfam PF04983 RNA polymerase Rpb1, domain 3 490 656 1.4E-26 T 14-09-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AY555_RS00995 20aeb830b209a000252329324cb02d42 1410 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1022 0.0 T 14-09-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AY555_RS05295 f0d89678972be5b18c14314acb2b73ac 253 PANTHER PTHR30027:SF3 8 248 2.2E-54 T 14-09-2016 AY555_RS05295 f0d89678972be5b18c14314acb2b73ac 253 SUPERFAMILY SSF75217 82 245 2.98E-43 T 14-09-2016 IPR029028 Alpha/beta knot methyltransferases AY555_RS05295 f0d89678972be5b18c14314acb2b73ac 253 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 17 240 1.7E-30 T 14-09-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AY555_RS05295 f0d89678972be5b18c14314acb2b73ac 253 SUPERFAMILY SSF88697 7 75 5.14E-13 T 14-09-2016 IPR015947 PUA-like domain AY555_RS05295 f0d89678972be5b18c14314acb2b73ac 253 Pfam PF04452 RNA methyltransferase 25 239 3.5E-52 T 14-09-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AY555_RS05295 f0d89678972be5b18c14314acb2b73ac 253 PANTHER PTHR30027 8 248 2.2E-54 T 14-09-2016 AY555_RS05295 f0d89678972be5b18c14314acb2b73ac 253 PIRSF PIRSF015601 6 245 2.2E-51 T 14-09-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AY555_RS05295 f0d89678972be5b18c14314acb2b73ac 253 Gene3D G3DSA:3.40.1280.10 8 246 6.6E-67 T 14-09-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AY555_RS09040 af2ade9bdda13742be7d5a1105a24c42 1155 Gene3D G3DSA:3.40.50.970 424 478 2.1E-5 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AY555_RS09040 af2ade9bdda13742be7d5a1105a24c42 1155 Gene3D G3DSA:3.40.50.970 483 612 1.8E-9 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AY555_RS09040 af2ade9bdda13742be7d5a1105a24c42 1155 Gene3D G3DSA:3.40.920.10 716 893 1.1E-11 T 14-09-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 AY555_RS09040 af2ade9bdda13742be7d5a1105a24c42 1155 PANTHER PTHR18968:SF134 405 752 1.1E-173 T 14-09-2016 AY555_RS09040 af2ade9bdda13742be7d5a1105a24c42 1155 SUPERFAMILY SSF52922 277 377 4.97E-6 T 14-09-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AY555_RS09040 af2ade9bdda13742be7d5a1105a24c42 1155 PANTHER PTHR18968 405 752 1.1E-173 T 14-09-2016 AY555_RS09040 af2ade9bdda13742be7d5a1105a24c42 1155 SUPERFAMILY SSF52518 20 200 1.18E-17 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AY555_RS09040 af2ade9bdda13742be7d5a1105a24c42 1155 SUPERFAMILY SSF52518 422 608 7.07E-13 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AY555_RS09040 af2ade9bdda13742be7d5a1105a24c42 1155 Gene3D G3DSA:3.40.50.970 49 214 6.3E-6 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AY555_RS09040 af2ade9bdda13742be7d5a1105a24c42 1155 SUPERFAMILY SSF53323 715 917 4.18E-19 T 14-09-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 AY555_RS09040 af2ade9bdda13742be7d5a1105a24c42 1155 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 450 535 1.6E-6 T 14-09-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AY555_RS09040 af2ade9bdda13742be7d5a1105a24c42 1155 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 724 911 5.0E-18 T 14-09-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 AY555_RS04795 98ee02fe0be2ac4a60d6d4cf5cb044dd 165 ProSitePatterns PS00819 Dps protein family signature 2. 73 87 - T 14-09-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 AY555_RS04795 98ee02fe0be2ac4a60d6d4cf5cb044dd 165 SUPERFAMILY SSF47240 13 164 1.62E-47 T 14-09-2016 IPR009078 Ferritin-like superfamily AY555_RS04795 98ee02fe0be2ac4a60d6d4cf5cb044dd 165 ProSitePatterns PS00818 Dps protein family signature 1. 47 63 - T 14-09-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 AY555_RS04795 98ee02fe0be2ac4a60d6d4cf5cb044dd 165 PANTHER PTHR30295:SF6 4 164 1.1E-65 T 14-09-2016 AY555_RS04795 98ee02fe0be2ac4a60d6d4cf5cb044dd 165 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 71 87 4.8E-11 T 14-09-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AY555_RS04795 98ee02fe0be2ac4a60d6d4cf5cb044dd 165 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 142 160 4.8E-11 T 14-09-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AY555_RS04795 98ee02fe0be2ac4a60d6d4cf5cb044dd 165 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 47 63 4.8E-11 T 14-09-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AY555_RS04795 98ee02fe0be2ac4a60d6d4cf5cb044dd 165 PIRSF PIRSF005900 4 165 2.9E-46 T 14-09-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AY555_RS04795 98ee02fe0be2ac4a60d6d4cf5cb044dd 165 PANTHER PTHR30295 4 164 1.1E-65 T 14-09-2016 AY555_RS04795 98ee02fe0be2ac4a60d6d4cf5cb044dd 165 Gene3D G3DSA:1.20.1260.10 8 164 2.6E-66 T 14-09-2016 IPR012347 Ferritin-related AY555_RS04795 98ee02fe0be2ac4a60d6d4cf5cb044dd 165 Pfam PF00210 Ferritin-like domain 28 164 3.3E-29 T 14-09-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AY555_RS04075 464822f83924ff9453e9eee0de29bff0 164 Gene3D G3DSA:2.70.40.10 11 153 1.2E-55 T 14-09-2016 IPR029054 dUTPase-like AY555_RS04075 464822f83924ff9453e9eee0de29bff0 164 PANTHER PTHR11241 18 162 1.2E-55 T 14-09-2016 AY555_RS04075 464822f83924ff9453e9eee0de29bff0 164 TIGRFAM TIGR00576 dut: dUTP diphosphatase 15 152 9.0E-55 T 14-09-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 AY555_RS04075 464822f83924ff9453e9eee0de29bff0 164 SUPERFAMILY SSF51283 10 153 4.84E-53 T 14-09-2016 IPR029054 dUTPase-like AY555_RS04075 464822f83924ff9453e9eee0de29bff0 164 Pfam PF00692 dUTPase 22 152 4.4E-32 T 14-09-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 AY555_RS04075 464822f83924ff9453e9eee0de29bff0 164 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 8 153 35.779 T 14-09-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 AY555_RS02390 15a72285cc1006b39b49386ba858ecaa 358 PANTHER PTHR11538 92 340 2.7E-105 T 14-09-2016 AY555_RS02390 15a72285cc1006b39b49386ba858ecaa 358 Pfam PF01409 tRNA synthetases class II core domain (F) 92 341 6.1E-103 T 14-09-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 AY555_RS02390 15a72285cc1006b39b49386ba858ecaa 358 SUPERFAMILY SSF55681 92 343 1.33E-78 T 14-09-2016 AY555_RS02390 15a72285cc1006b39b49386ba858ecaa 358 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 342 46.906 T 14-09-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 AY555_RS02390 15a72285cc1006b39b49386ba858ecaa 358 SUPERFAMILY SSF46589 13 99 1.36E-19 T 14-09-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 AY555_RS02390 15a72285cc1006b39b49386ba858ecaa 358 Gene3D G3DSA:3.30.930.10 9 343 1.6E-128 T 14-09-2016 AY555_RS02390 15a72285cc1006b39b49386ba858ecaa 358 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 9.8E-24 T 14-09-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AY555_RS02390 15a72285cc1006b39b49386ba858ecaa 358 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 341 6.1E-102 T 14-09-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AY555_RS01585 2c4741b2867171cfc9554487e2e84190 391 PANTHER PTHR34700 287 388 1.8E-14 T 14-09-2016 AY555_RS01585 2c4741b2867171cfc9554487e2e84190 391 SMART SM00257 335 384 2.1E-5 T 14-09-2016 IPR018392 LysM domain AY555_RS01585 2c4741b2867171cfc9554487e2e84190 391 Pfam PF01476 LysM domain 337 384 1.9E-6 T 14-09-2016 IPR018392 LysM domain AY555_RS01585 2c4741b2867171cfc9554487e2e84190 391 Gene3D G3DSA:3.10.350.10 338 385 2.3E-5 T 14-09-2016 IPR018392 LysM domain AY555_RS01585 2c4741b2867171cfc9554487e2e84190 391 PANTHER PTHR34700:SF1 287 388 1.8E-14 T 14-09-2016 AY555_RS03605 da695aaa244d8c8ec608e2bfdec4b8d4 322 Pfam PF02881 SRP54-type protein, helical bundle domain 33 95 4.8E-7 T 14-09-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 AY555_RS03605 da695aaa244d8c8ec608e2bfdec4b8d4 322 Gene3D G3DSA:3.40.50.300 129 317 1.5E-78 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS03605 da695aaa244d8c8ec608e2bfdec4b8d4 322 PANTHER PTHR11564 12 320 2.3E-124 T 14-09-2016 AY555_RS03605 da695aaa244d8c8ec608e2bfdec4b8d4 322 SUPERFAMILY SSF52540 115 317 1.33E-49 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS03605 da695aaa244d8c8ec608e2bfdec4b8d4 322 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 45 317 57.096 T 14-09-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AY555_RS03605 da695aaa244d8c8ec608e2bfdec4b8d4 322 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 290 303 - T 14-09-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 AY555_RS03605 da695aaa244d8c8ec608e2bfdec4b8d4 322 SMART SM00382 115 268 1.3E-8 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS03605 da695aaa244d8c8ec608e2bfdec4b8d4 322 PANTHER PTHR11564:SF16 12 320 2.3E-124 T 14-09-2016 AY555_RS03605 da695aaa244d8c8ec608e2bfdec4b8d4 322 SMART SM00963 22 101 7.7E-16 T 14-09-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 AY555_RS03605 da695aaa244d8c8ec608e2bfdec4b8d4 322 Pfam PF00448 SRP54-type protein, GTPase domain 116 316 4.1E-72 T 14-09-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 AY555_RS03605 da695aaa244d8c8ec608e2bfdec4b8d4 322 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 46 315 2.8E-97 T 14-09-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AY555_RS03605 da695aaa244d8c8ec608e2bfdec4b8d4 322 Gene3D G3DSA:1.20.120.140 47 128 3.5E-22 T 14-09-2016 AY555_RS03605 da695aaa244d8c8ec608e2bfdec4b8d4 322 SUPERFAMILY SSF47364 17 93 6.93E-18 T 14-09-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 AY555_RS03605 da695aaa244d8c8ec608e2bfdec4b8d4 322 SMART SM00962 116 317 7.1E-111 T 14-09-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 AY555_RS06340 f32b0771919450591a43152fd6ba01e5 379 SUPERFAMILY SSF50969 63 337 6.67E-23 T 14-09-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like AY555_RS06340 f32b0771919450591a43152fd6ba01e5 379 Gene3D G3DSA:2.130.10.10 58 310 7.2E-18 T 14-09-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AY555_RS06340 f32b0771919450591a43152fd6ba01e5 379 Pfam PF07433 Protein of unknown function (DUF1513) 71 372 1.7E-95 T 14-09-2016 IPR008311 Uncharacterised conserved protein UCP028101 AY555_RS06340 f32b0771919450591a43152fd6ba01e5 379 PIRSF PIRSF028101 5 375 1.3E-82 T 14-09-2016 IPR008311 Uncharacterised conserved protein UCP028101 AY555_RS00155 b6c44f26091caa741aa4dd0aef972b30 345 PANTHER PTHR36307 13 345 1.3E-26 T 14-09-2016 AY555_RS00155 b6c44f26091caa741aa4dd0aef972b30 345 Pfam PF13144 Chaperone for flagella basal body P-ring formation 139 335 4.3E-42 T 14-09-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AY555_RS00155 b6c44f26091caa741aa4dd0aef972b30 345 SMART SM00858 212 274 3.9E-9 T 14-09-2016 IPR013974 SAF domain AY555_RS00155 b6c44f26091caa741aa4dd0aef972b30 345 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 201 335 2.3E-38 T 14-09-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AY555_RS00880 45aa259eace4c9469f3e55a61e7c3ec8 204 ProSitePatterns PS00585 Ribosomal protein S5 signature. 49 81 - T 14-09-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site AY555_RS00880 45aa259eace4c9469f3e55a61e7c3ec8 204 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 185 35.351 T 14-09-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AY555_RS00880 45aa259eace4c9469f3e55a61e7c3ec8 204 Gene3D G3DSA:3.30.230.10 97 181 1.4E-32 T 14-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AY555_RS00880 45aa259eace4c9469f3e55a61e7c3ec8 204 Gene3D G3DSA:3.30.160.20 30 93 6.7E-29 T 14-09-2016 IPR014720 Double-stranded RNA-binding domain AY555_RS00880 45aa259eace4c9469f3e55a61e7c3ec8 204 Pfam PF03719 Ribosomal protein S5, C-terminal domain 109 179 3.8E-29 T 14-09-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 AY555_RS00880 45aa259eace4c9469f3e55a61e7c3ec8 204 PANTHER PTHR13718 30 183 9.5E-69 T 14-09-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 AY555_RS00880 45aa259eace4c9469f3e55a61e7c3ec8 204 SUPERFAMILY SSF54211 101 181 6.83E-26 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AY555_RS00880 45aa259eace4c9469f3e55a61e7c3ec8 204 SUPERFAMILY SSF54768 29 97 2.3E-22 T 14-09-2016 AY555_RS00880 45aa259eace4c9469f3e55a61e7c3ec8 204 Pfam PF00333 Ribosomal protein S5, N-terminal domain 32 96 1.1E-27 T 14-09-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 AY555_RS00880 45aa259eace4c9469f3e55a61e7c3ec8 204 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 29 184 1.8E-64 T 14-09-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AY555_RS09335 38d56b35a186244e0727c2bde54e524d 370 Pfam PF03963 Flagellar hook capping protein - N-terminal region 15 82 1.0E-17 T 14-09-2016 IPR005648 Flagellar hook capping protein AY555_RS09335 38d56b35a186244e0727c2bde54e524d 370 PANTHER PTHR30435 24 240 8.5E-40 T 14-09-2016 AY555_RS09335 38d56b35a186244e0727c2bde54e524d 370 PANTHER PTHR30435:SF15 24 240 8.5E-40 T 14-09-2016 AY555_RS09335 38d56b35a186244e0727c2bde54e524d 370 Pfam PF13860 FlgD Ig-like domain 109 183 4.6E-18 T 14-09-2016 IPR025965 FlgD Ig-like domain AY555_RS09335 38d56b35a186244e0727c2bde54e524d 370 Pfam PF13860 FlgD Ig-like domain 255 325 1.8E-15 T 14-09-2016 IPR025965 FlgD Ig-like domain AY555_RS09335 38d56b35a186244e0727c2bde54e524d 370 Pfam PF13861 FlgD Tudor-like domain 93 221 1.0E-7 T 14-09-2016 IPR025963 FlgD Tudor-like domain AY555_RS09335 38d56b35a186244e0727c2bde54e524d 370 Pfam PF13861 FlgD Tudor-like domain 237 364 3.7E-7 T 14-09-2016 IPR025963 FlgD Tudor-like domain AY555_RS09505 21bb01347c0ad45c2f169fc0ad322518 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 5.9E-40 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS09505 21bb01347c0ad45c2f169fc0ad322518 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 5.9E-40 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS09505 21bb01347c0ad45c2f169fc0ad322518 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 5.9E-40 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS09505 21bb01347c0ad45c2f169fc0ad322518 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 5.9E-40 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS09505 21bb01347c0ad45c2f169fc0ad322518 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 5.9E-40 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS09505 21bb01347c0ad45c2f169fc0ad322518 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 5.9E-40 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS09505 21bb01347c0ad45c2f169fc0ad322518 240 SUPERFAMILY SSF51735 3 239 4.23E-66 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS09505 21bb01347c0ad45c2f169fc0ad322518 240 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 14-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AY555_RS09505 21bb01347c0ad45c2f169fc0ad322518 240 PANTHER PTHR24322 151 182 1.9E-41 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS09505 21bb01347c0ad45c2f169fc0ad322518 240 PANTHER PTHR24322 6 134 1.9E-41 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS09505 21bb01347c0ad45c2f169fc0ad322518 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 9.5E-12 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS09505 21bb01347c0ad45c2f169fc0ad322518 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 9.5E-12 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS09505 21bb01347c0ad45c2f169fc0ad322518 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 9.5E-12 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS09505 21bb01347c0ad45c2f169fc0ad322518 240 Gene3D G3DSA:3.40.50.720 2 239 1.7E-63 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS09505 21bb01347c0ad45c2f169fc0ad322518 240 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 8 238 4.4E-48 T 14-09-2016 AY555_RS03635 b7d7e1edcdc7eabd58c5b17010e0f6ed 344 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 21 334 3.6E-44 T 14-09-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 AY555_RS03635 b7d7e1edcdc7eabd58c5b17010e0f6ed 344 SUPERFAMILY SSF52540 21 211 1.12E-11 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS03635 b7d7e1edcdc7eabd58c5b17010e0f6ed 344 SUPERFAMILY SSF48019 217 336 1.28E-15 T 14-09-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 AY555_RS03635 b7d7e1edcdc7eabd58c5b17010e0f6ed 344 Gene3D G3DSA:1.10.8.60 143 227 8.5E-10 T 14-09-2016 AY555_RS03635 b7d7e1edcdc7eabd58c5b17010e0f6ed 344 PANTHER PTHR34388 1 344 1.1E-41 T 14-09-2016 AY555_RS03635 b7d7e1edcdc7eabd58c5b17010e0f6ed 344 Gene3D G3DSA:1.20.272.20 228 324 2.0E-4 T 14-09-2016 AY555_RS03635 b7d7e1edcdc7eabd58c5b17010e0f6ed 344 Pfam PF06144 DNA polymerase III, delta subunit 23 189 6.1E-7 T 14-09-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 AY555_RS08485 c0cd615d53992ade042c689075a64397 199 SUPERFAMILY SSF46609 1 87 1.57E-33 T 14-09-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AY555_RS08485 c0cd615d53992ade042c689075a64397 199 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 86 2.5E-31 T 14-09-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AY555_RS08485 c0cd615d53992ade042c689075a64397 199 PANTHER PTHR11404:SF8 1 197 4.4E-110 T 14-09-2016 AY555_RS08485 c0cd615d53992ade042c689075a64397 199 PIRSF PIRSF000349 1 199 1.9E-80 T 14-09-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AY555_RS08485 c0cd615d53992ade042c689075a64397 199 PANTHER PTHR11404 1 197 4.4E-110 T 14-09-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AY555_RS08485 c0cd615d53992ade042c689075a64397 199 SUPERFAMILY SSF54719 88 196 1.83E-42 T 14-09-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AY555_RS08485 c0cd615d53992ade042c689075a64397 199 PRINTS PR01703 Manganese superoxide dismutase signature 122 130 3.0E-23 T 14-09-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AY555_RS08485 c0cd615d53992ade042c689075a64397 199 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 3.0E-23 T 14-09-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AY555_RS08485 c0cd615d53992ade042c689075a64397 199 PRINTS PR01703 Manganese superoxide dismutase signature 69 82 3.0E-23 T 14-09-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AY555_RS08485 c0cd615d53992ade042c689075a64397 199 PRINTS PR01703 Manganese superoxide dismutase signature 158 170 3.0E-23 T 14-09-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AY555_RS08485 c0cd615d53992ade042c689075a64397 199 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 3.0E-23 T 14-09-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AY555_RS08485 c0cd615d53992ade042c689075a64397 199 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 160 167 - T 14-09-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AY555_RS08485 c0cd615d53992ade042c689075a64397 199 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 94 193 9.4E-38 T 14-09-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AY555_RS08485 c0cd615d53992ade042c689075a64397 199 Gene3D G3DSA:1.10.287.990 20 86 4.1E-22 T 14-09-2016 AY555_RS04305 9b16c402139f7dbdcc2dd0117e96ef6d 451 SUPERFAMILY SSF56954 166 263 2.35E-5 T 14-09-2016 AY555_RS04305 9b16c402139f7dbdcc2dd0117e96ef6d 451 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 39 451 1.1E-105 T 14-09-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 AY555_RS04305 9b16c402139f7dbdcc2dd0117e96ef6d 451 SUPERFAMILY SSF111369 86 151 2.22E-6 T 14-09-2016 AY555_RS04305 9b16c402139f7dbdcc2dd0117e96ef6d 451 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 415 430 1.8E-42 T 14-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AY555_RS04305 9b16c402139f7dbdcc2dd0117e96ef6d 451 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 350 374 1.8E-42 T 14-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AY555_RS04305 9b16c402139f7dbdcc2dd0117e96ef6d 451 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 48 71 1.8E-42 T 14-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AY555_RS04305 9b16c402139f7dbdcc2dd0117e96ef6d 451 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 374 397 1.8E-42 T 14-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AY555_RS04305 9b16c402139f7dbdcc2dd0117e96ef6d 451 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 90 110 1.8E-42 T 14-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AY555_RS04305 9b16c402139f7dbdcc2dd0117e96ef6d 451 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 317 338 1.8E-42 T 14-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AY555_RS04305 9b16c402139f7dbdcc2dd0117e96ef6d 451 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 430 450 1.8E-42 T 14-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AY555_RS04305 9b16c402139f7dbdcc2dd0117e96ef6d 451 PANTHER PTHR30386:SF4 164 451 3.9E-84 T 14-09-2016 AY555_RS04305 9b16c402139f7dbdcc2dd0117e96ef6d 451 PANTHER PTHR30386:SF4 41 133 3.9E-84 T 14-09-2016 AY555_RS04305 9b16c402139f7dbdcc2dd0117e96ef6d 451 Gene3D G3DSA:2.40.50.100 81 112 1.3E-16 T 14-09-2016 AY555_RS04305 9b16c402139f7dbdcc2dd0117e96ef6d 451 Gene3D G3DSA:2.40.50.100 302 336 1.3E-16 T 14-09-2016 AY555_RS04305 9b16c402139f7dbdcc2dd0117e96ef6d 451 Pfam PF13533 Biotin-lipoyl like 87 121 2.2E-7 T 14-09-2016 AY555_RS04305 9b16c402139f7dbdcc2dd0117e96ef6d 451 PANTHER PTHR30386 164 451 3.9E-84 T 14-09-2016 AY555_RS04305 9b16c402139f7dbdcc2dd0117e96ef6d 451 PANTHER PTHR30386 41 133 3.9E-84 T 14-09-2016 AY555_RS04305 9b16c402139f7dbdcc2dd0117e96ef6d 451 Pfam PF13437 HlyD family secretion protein 304 406 1.8E-17 T 14-09-2016 AY555_RS07760 307b500e589fe1fe55145a5c5f126e79 261 PRINTS PR00395 Ribosomal protein S2 signature 177 188 8.9E-40 T 14-09-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS07760 307b500e589fe1fe55145a5c5f126e79 261 PRINTS PR00395 Ribosomal protein S2 signature 160 177 8.9E-40 T 14-09-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS07760 307b500e589fe1fe55145a5c5f126e79 261 PRINTS PR00395 Ribosomal protein S2 signature 198 212 8.9E-40 T 14-09-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS07760 307b500e589fe1fe55145a5c5f126e79 261 PRINTS PR00395 Ribosomal protein S2 signature 39 48 8.9E-40 T 14-09-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS07760 307b500e589fe1fe55145a5c5f126e79 261 PRINTS PR00395 Ribosomal protein S2 signature 89 106 8.9E-40 T 14-09-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS07760 307b500e589fe1fe55145a5c5f126e79 261 PRINTS PR00395 Ribosomal protein S2 signature 8 26 8.9E-40 T 14-09-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS07760 307b500e589fe1fe55145a5c5f126e79 261 Pfam PF00318 Ribosomal protein S2 11 226 1.1E-91 T 14-09-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS07760 307b500e589fe1fe55145a5c5f126e79 261 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 4 227 41.369 T 14-09-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 AY555_RS07760 307b500e589fe1fe55145a5c5f126e79 261 Gene3D G3DSA:1.10.287.610 102 154 1.1E-23 T 14-09-2016 AY555_RS07760 307b500e589fe1fe55145a5c5f126e79 261 PANTHER PTHR12534 6 245 7.6E-115 T 14-09-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 AY555_RS07760 307b500e589fe1fe55145a5c5f126e79 261 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 6 226 1.3E-97 T 14-09-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 AY555_RS07760 307b500e589fe1fe55145a5c5f126e79 261 SUPERFAMILY SSF52313 8 237 4.45E-92 T 14-09-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain AY555_RS07760 307b500e589fe1fe55145a5c5f126e79 261 Gene3D G3DSA:3.40.50.10490 25 101 7.4E-62 T 14-09-2016 AY555_RS07760 307b500e589fe1fe55145a5c5f126e79 261 Gene3D G3DSA:3.40.50.10490 160 238 7.4E-62 T 14-09-2016 AY555_RS07760 307b500e589fe1fe55145a5c5f126e79 261 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 160 184 - T 14-09-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AY555_RS02550 96313cdf637211e7dfbf58dec4abcf3a 354 PANTHER PTHR10366:SF437 1 350 3.3E-159 T 14-09-2016 AY555_RS02550 96313cdf637211e7dfbf58dec4abcf3a 354 Gene3D G3DSA:3.40.50.720 3 190 8.8E-59 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS02550 96313cdf637211e7dfbf58dec4abcf3a 354 Gene3D G3DSA:3.90.25.10 191 347 1.0E-52 T 14-09-2016 AY555_RS02550 96313cdf637211e7dfbf58dec4abcf3a 354 Pfam PF16363 GDP-mannose 4,6 dehydratase 3 323 6.4E-95 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS02550 96313cdf637211e7dfbf58dec4abcf3a 354 SUPERFAMILY SSF51735 2 349 1.92E-86 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS02550 96313cdf637211e7dfbf58dec4abcf3a 354 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 337 8.8E-146 T 14-09-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 AY555_RS02550 96313cdf637211e7dfbf58dec4abcf3a 354 PANTHER PTHR10366 1 350 3.3E-159 T 14-09-2016 AY555_RS04225 26bd1a6e25dee80712ba14900d32925d 880 Pfam PF05188 MutS domain II 124 250 4.0E-20 T 14-09-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AY555_RS04225 26bd1a6e25dee80712ba14900d32925d 880 Gene3D G3DSA:3.40.1170.10 1 116 2.3E-47 T 14-09-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 AY555_RS04225 26bd1a6e25dee80712ba14900d32925d 880 Pfam PF01624 MutS domain I 1 115 1.7E-40 T 14-09-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 AY555_RS04225 26bd1a6e25dee80712ba14900d32925d 880 SMART SM00533 282 597 6.3E-83 T 14-09-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AY555_RS04225 26bd1a6e25dee80712ba14900d32925d 880 Gene3D G3DSA:3.40.50.300 573 807 5.9E-82 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04225 26bd1a6e25dee80712ba14900d32925d 880 SUPERFAMILY SSF53150 113 279 2.22E-37 T 14-09-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AY555_RS04225 26bd1a6e25dee80712ba14900d32925d 880 Pfam PF00488 MutS domain V 620 806 6.9E-84 T 14-09-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AY555_RS04225 26bd1a6e25dee80712ba14900d32925d 880 Pfam PF05192 MutS domain III 268 564 6.4E-39 T 14-09-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AY555_RS04225 26bd1a6e25dee80712ba14900d32925d 880 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 698 714 - T 14-09-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AY555_RS04225 26bd1a6e25dee80712ba14900d32925d 880 SUPERFAMILY SSF55271 1 111 7.19E-38 T 14-09-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 AY555_RS04225 26bd1a6e25dee80712ba14900d32925d 880 SUPERFAMILY SSF48334 266 570 2.35E-79 T 14-09-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AY555_RS04225 26bd1a6e25dee80712ba14900d32925d 880 Gene3D G3DSA:3.30.420.110 123 255 8.0E-31 T 14-09-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AY555_RS04225 26bd1a6e25dee80712ba14900d32925d 880 PANTHER PTHR11361 1 811 0.0 T 14-09-2016 AY555_RS04225 26bd1a6e25dee80712ba14900d32925d 880 PANTHER PTHR11361:SF86 1 811 0.0 T 14-09-2016 AY555_RS04225 26bd1a6e25dee80712ba14900d32925d 880 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 1 869 23.434 T 14-09-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 AY555_RS04225 26bd1a6e25dee80712ba14900d32925d 880 Gene3D G3DSA:1.10.1420.10 263 471 2.6E-49 T 14-09-2016 AY555_RS04225 26bd1a6e25dee80712ba14900d32925d 880 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 1 874 1.7E-268 T 14-09-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 AY555_RS04225 26bd1a6e25dee80712ba14900d32925d 880 Pfam PF05190 MutS family domain IV 432 522 9.5E-20 T 14-09-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 AY555_RS04225 26bd1a6e25dee80712ba14900d32925d 880 SUPERFAMILY SSF52540 573 808 8.76E-58 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04225 26bd1a6e25dee80712ba14900d32925d 880 SMART SM00534 617 804 9.2E-111 T 14-09-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AY555_RS08830 b43dfbd31d6078181fd16d2c91f2f22e 134 PANTHER PTHR34476 2 90 3.0E-20 T 14-09-2016 AY555_RS08830 b43dfbd31d6078181fd16d2c91f2f22e 134 SMART SM01409 8 60 2.8E-12 T 14-09-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AY555_RS08830 b43dfbd31d6078181fd16d2c91f2f22e 134 Gene3D G3DSA:3.90.940.10 1 65 8.3E-11 T 14-09-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AY555_RS08830 b43dfbd31d6078181fd16d2c91f2f22e 134 SUPERFAMILY SSF63562 1 81 6.93E-19 T 14-09-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AY555_RS08830 b43dfbd31d6078181fd16d2c91f2f22e 134 Pfam PF01192 RNA polymerase Rpb6 8 59 2.4E-11 T 14-09-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AY555_RS08830 b43dfbd31d6078181fd16d2c91f2f22e 134 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 61 15.023 T 14-09-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AY555_RS08830 b43dfbd31d6078181fd16d2c91f2f22e 134 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 58 2.9E-18 T 14-09-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AY555_RS00150 8097a2f6c068e5223bee462afec41198 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 10 30 - T 14-09-2016 IPR019776 Flagellar basal body rod protein, conserved site AY555_RS00150 8097a2f6c068e5223bee462afec41198 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 9.0E-46 T 14-09-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AY555_RS00150 8097a2f6c068e5223bee462afec41198 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 146 243 1.5E-30 T 14-09-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AY555_RS00150 8097a2f6c068e5223bee462afec41198 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 260 9.7E-26 T 14-09-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AY555_RS00150 8097a2f6c068e5223bee462afec41198 261 SUPERFAMILY SSF117143 92 222 2.62E-35 T 14-09-2016 AY555_RS00150 8097a2f6c068e5223bee462afec41198 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 3 260 1.6E-109 T 14-09-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 AY555_RS00150 8097a2f6c068e5223bee462afec41198 261 PANTHER PTHR30435:SF19 1 261 3.5E-114 T 14-09-2016 AY555_RS00150 8097a2f6c068e5223bee462afec41198 261 Pfam PF00460 Flagella basal body rod protein 6 32 6.0E-9 T 14-09-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AY555_RS00150 8097a2f6c068e5223bee462afec41198 261 PANTHER PTHR30435 1 261 3.5E-114 T 14-09-2016 AY555_RS01140 f06ad148a5d9b67560432c0979becd66 608 PANTHER PTHR10804 9 182 1.1E-205 T 14-09-2016 AY555_RS01140 f06ad148a5d9b67560432c0979becd66 608 Pfam PF16189 Creatinase/Prolidase N-terminal domain 150 313 7.2E-34 T 14-09-2016 AY555_RS01140 f06ad148a5d9b67560432c0979becd66 608 PANTHER PTHR10804:SF105 289 600 1.1E-205 T 14-09-2016 AY555_RS01140 f06ad148a5d9b67560432c0979becd66 608 Pfam PF00557 Metallopeptidase family M24 317 529 2.1E-40 T 14-09-2016 IPR000994 Peptidase M24, structural domain AY555_RS01140 f06ad148a5d9b67560432c0979becd66 608 Gene3D G3DSA:3.90.230.10 307 569 4.2E-51 T 14-09-2016 IPR000994 Peptidase M24, structural domain AY555_RS01140 f06ad148a5d9b67560432c0979becd66 608 Gene3D G3DSA:3.40.350.10 7 132 1.2E-18 T 14-09-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AY555_RS01140 f06ad148a5d9b67560432c0979becd66 608 PANTHER PTHR10804 289 600 1.1E-205 T 14-09-2016 AY555_RS01140 f06ad148a5d9b67560432c0979becd66 608 PANTHER PTHR10804:SF105 9 182 1.1E-205 T 14-09-2016 AY555_RS01140 f06ad148a5d9b67560432c0979becd66 608 SUPERFAMILY SSF53092 3 131 6.28E-13 T 14-09-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal AY555_RS01140 f06ad148a5d9b67560432c0979becd66 608 SUPERFAMILY SSF55920 310 568 7.33E-52 T 14-09-2016 IPR000994 Peptidase M24, structural domain AY555_RS01140 f06ad148a5d9b67560432c0979becd66 608 Pfam PF01321 Creatinase/Prolidase N-terminal domain 9 131 1.9E-17 T 14-09-2016 IPR000587 Creatinase, N-terminal GO:0016787 AY555_RS01140 f06ad148a5d9b67560432c0979becd66 608 Pfam PF16188 C-terminal region of peptidase_M24 543 602 1.3E-21 T 14-09-2016 IPR032416 Peptidase M24, C-terminal domain AY555_RS04610 e34b726964d977a8c8ed65349c6057c8 435 SUPERFAMILY SSF103473 14 419 2.35E-33 T 14-09-2016 IPR020846 Major facilitator superfamily domain AY555_RS04610 e34b726964d977a8c8ed65349c6057c8 435 Gene3D G3DSA:1.20.1250.20 235 423 7.9E-16 T 14-09-2016 AY555_RS04610 e34b726964d977a8c8ed65349c6057c8 435 Gene3D G3DSA:1.20.1250.20 13 206 2.2E-11 T 14-09-2016 AY555_RS04610 e34b726964d977a8c8ed65349c6057c8 435 PANTHER PTHR12778 14 416 5.1E-100 T 14-09-2016 AY555_RS04610 e34b726964d977a8c8ed65349c6057c8 435 Pfam PF07690 Major Facilitator Superfamily 32 319 6.8E-14 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AY555_RS01955 642c5eb5fc0b03389b9bc7f5ee5fccc5 310 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 50 57 - T 14-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AY555_RS01955 642c5eb5fc0b03389b9bc7f5ee5fccc5 310 PANTHER PTHR11405 6 301 1.4E-113 T 14-09-2016 AY555_RS01955 642c5eb5fc0b03389b9bc7f5ee5fccc5 310 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 7 290 7.4E-96 T 14-09-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AY555_RS01955 642c5eb5fc0b03389b9bc7f5ee5fccc5 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 50 69 5.3E-23 T 14-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AY555_RS01955 642c5eb5fc0b03389b9bc7f5ee5fccc5 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 243 252 5.3E-23 T 14-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AY555_RS01955 642c5eb5fc0b03389b9bc7f5ee5fccc5 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 132 143 5.3E-23 T 14-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AY555_RS01955 642c5eb5fc0b03389b9bc7f5ee5fccc5 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 255 278 5.3E-23 T 14-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AY555_RS01955 642c5eb5fc0b03389b9bc7f5ee5fccc5 310 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 7 145 2.7E-46 T 14-09-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AY555_RS01955 642c5eb5fc0b03389b9bc7f5ee5fccc5 310 Gene3D G3DSA:3.40.50.1370 143 277 6.3E-42 T 14-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AY555_RS01955 642c5eb5fc0b03389b9bc7f5ee5fccc5 310 SUPERFAMILY SSF53671 4 292 2.1E-91 T 14-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AY555_RS01955 642c5eb5fc0b03389b9bc7f5ee5fccc5 310 Gene3D G3DSA:3.40.50.1370 5 142 7.7E-53 T 14-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AY555_RS01955 642c5eb5fc0b03389b9bc7f5ee5fccc5 310 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 152 288 3.9E-35 T 14-09-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AY555_RS01955 642c5eb5fc0b03389b9bc7f5ee5fccc5 310 PANTHER PTHR11405:SF1 6 301 1.4E-113 T 14-09-2016 AY555_RS01955 642c5eb5fc0b03389b9bc7f5ee5fccc5 310 PRINTS PR00102 Ornithine carbamoyltransferase signature 269 280 3.3E-28 T 14-09-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AY555_RS01955 642c5eb5fc0b03389b9bc7f5ee5fccc5 310 PRINTS PR00102 Ornithine carbamoyltransferase signature 121 135 3.3E-28 T 14-09-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AY555_RS01955 642c5eb5fc0b03389b9bc7f5ee5fccc5 310 PRINTS PR00102 Ornithine carbamoyltransferase signature 81 94 3.3E-28 T 14-09-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AY555_RS01955 642c5eb5fc0b03389b9bc7f5ee5fccc5 310 PRINTS PR00102 Ornithine carbamoyltransferase signature 48 62 3.3E-28 T 14-09-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AY555_RS01955 642c5eb5fc0b03389b9bc7f5ee5fccc5 310 PRINTS PR00102 Ornithine carbamoyltransferase signature 210 220 3.3E-28 T 14-09-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AY555_RS09440 fc56080bb4cd4d4523d87926cfde5a9e 483 Pfam PF00199 Catalase 13 393 1.1E-187 T 14-09-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AY555_RS09440 fc56080bb4cd4d4523d87926cfde5a9e 483 SUPERFAMILY SSF56634 7 482 4.45E-210 T 14-09-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AY555_RS09440 fc56080bb4cd4d4523d87926cfde5a9e 483 ProSitePatterns PS00438 Catalase proximal active site signature. 48 64 - T 14-09-2016 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AY555_RS09440 fc56080bb4cd4d4523d87926cfde5a9e 483 Gene3D G3DSA:2.40.180.10 6 361 1.6E-176 T 14-09-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AY555_RS09440 fc56080bb4cd4d4523d87926cfde5a9e 483 PIRSF PIRSF038928 2 483 5.5E-219 T 14-09-2016 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AY555_RS09440 fc56080bb4cd4d4523d87926cfde5a9e 483 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 338 346 - T 14-09-2016 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AY555_RS09440 fc56080bb4cd4d4523d87926cfde5a9e 483 Pfam PF06628 Catalase-related immune-responsive 421 481 6.2E-22 T 14-09-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AY555_RS09440 fc56080bb4cd4d4523d87926cfde5a9e 483 SMART SM01060 12 397 2.9E-277 T 14-09-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AY555_RS09440 fc56080bb4cd4d4523d87926cfde5a9e 483 PANTHER PTHR11465 13 483 1.2E-291 T 14-09-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AY555_RS09440 fc56080bb4cd4d4523d87926cfde5a9e 483 PRINTS PR00067 Catalase signature 293 320 1.5E-72 T 14-09-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AY555_RS09440 fc56080bb4cd4d4523d87926cfde5a9e 483 PRINTS PR00067 Catalase signature 88 106 1.5E-72 T 14-09-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AY555_RS09440 fc56080bb4cd4d4523d87926cfde5a9e 483 PRINTS PR00067 Catalase signature 25 48 1.5E-72 T 14-09-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AY555_RS09440 fc56080bb4cd4d4523d87926cfde5a9e 483 PRINTS PR00067 Catalase signature 109 126 1.5E-72 T 14-09-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AY555_RS09440 fc56080bb4cd4d4523d87926cfde5a9e 483 PRINTS PR00067 Catalase signature 325 351 1.5E-72 T 14-09-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AY555_RS09440 fc56080bb4cd4d4523d87926cfde5a9e 483 PRINTS PR00067 Catalase signature 128 146 1.5E-72 T 14-09-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AY555_RS09515 2c0dd47689e34f3cb8806e2453e75987 69 SUPERFAMILY SSF46894 4 68 4.42E-19 T 14-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AY555_RS09515 2c0dd47689e34f3cb8806e2453e75987 69 Gene3D G3DSA:1.10.10.10 7 67 2.7E-25 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS09515 2c0dd47689e34f3cb8806e2453e75987 69 ProSitePatterns PS00622 LuxR-type HTH domain signature. 21 48 - T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AY555_RS09515 2c0dd47689e34f3cb8806e2453e75987 69 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 37 49 7.6E-11 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AY555_RS09515 2c0dd47689e34f3cb8806e2453e75987 69 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 7 21 7.6E-11 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AY555_RS09515 2c0dd47689e34f3cb8806e2453e75987 69 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 21 37 7.6E-11 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AY555_RS09515 2c0dd47689e34f3cb8806e2453e75987 69 PANTHER PTHR26402:SF151 7 62 1.6E-12 T 14-09-2016 AY555_RS09515 2c0dd47689e34f3cb8806e2453e75987 69 PANTHER PTHR26402 7 62 1.6E-12 T 14-09-2016 AY555_RS09515 2c0dd47689e34f3cb8806e2453e75987 69 SMART SM00421 4 61 1.1E-19 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AY555_RS09515 2c0dd47689e34f3cb8806e2453e75987 69 Pfam PF00196 Bacterial regulatory proteins, luxR family 6 61 4.8E-21 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AY555_RS03910 26419def586db4cfdd011845d4d731e8 486 PANTHER PTHR11938:SF93 27 469 1.5E-123 T 14-09-2016 AY555_RS03910 26419def586db4cfdd011845d4d731e8 486 SUPERFAMILY SSF51971 147 401 6.47E-61 T 14-09-2016 AY555_RS03910 26419def586db4cfdd011845d4d731e8 486 Gene3D G3DSA:3.50.50.60 238 400 4.6E-44 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS03910 26419def586db4cfdd011845d4d731e8 486 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 150 457 3.5E-24 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS03910 26419def586db4cfdd011845d4d731e8 486 Gene3D G3DSA:1.10.1060.10 5 151 8.5E-41 T 14-09-2016 AY555_RS03910 26419def586db4cfdd011845d4d731e8 486 Gene3D G3DSA:3.40.50.720 401 473 8.4E-36 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS03910 26419def586db4cfdd011845d4d731e8 486 Gene3D G3DSA:3.40.50.720 152 237 8.4E-36 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS03910 26419def586db4cfdd011845d4d731e8 486 PANTHER PTHR11938 27 469 1.5E-123 T 14-09-2016 AY555_RS03910 26419def586db4cfdd011845d4d731e8 486 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 7 469 3.2E-147 T 14-09-2016 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 AY555_RS03910 26419def586db4cfdd011845d4d731e8 486 SUPERFAMILY SSF46548 4 158 2.62E-34 T 14-09-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 AY555_RS03910 26419def586db4cfdd011845d4d731e8 486 PRINTS PR00419 Adrenodoxin reductase family signature 172 185 1.5E-28 T 14-09-2016 AY555_RS03910 26419def586db4cfdd011845d4d731e8 486 PRINTS PR00419 Adrenodoxin reductase family signature 149 171 1.5E-28 T 14-09-2016 AY555_RS03910 26419def586db4cfdd011845d4d731e8 486 PRINTS PR00419 Adrenodoxin reductase family signature 214 224 1.5E-28 T 14-09-2016 AY555_RS03910 26419def586db4cfdd011845d4d731e8 486 PRINTS PR00419 Adrenodoxin reductase family signature 289 303 1.5E-28 T 14-09-2016 AY555_RS03910 26419def586db4cfdd011845d4d731e8 486 PRINTS PR00419 Adrenodoxin reductase family signature 323 336 1.5E-28 T 14-09-2016 AY555_RS03910 26419def586db4cfdd011845d4d731e8 486 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 135 1.7E-35 T 14-09-2016 IPR028261 Dihydroprymidine dehydrogenase domain II AY555_RS04780 68ef28dcc4a88262bf99c6a141275ae6 423 SUPERFAMILY SSF51230 1 96 1.44E-27 T 14-09-2016 IPR011053 Single hybrid motif AY555_RS04780 68ef28dcc4a88262bf99c6a141275ae6 423 PANTHER PTHR23151:SF47 3 423 1.5E-227 T 14-09-2016 AY555_RS04780 68ef28dcc4a88262bf99c6a141275ae6 423 SUPERFAMILY SSF47005 120 163 2.49E-11 T 14-09-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 AY555_RS04780 68ef28dcc4a88262bf99c6a141275ae6 423 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 422 3.3E-175 T 14-09-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 AY555_RS04780 68ef28dcc4a88262bf99c6a141275ae6 423 Pfam PF02817 e3 binding domain 125 159 2.4E-13 T 14-09-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 AY555_RS04780 68ef28dcc4a88262bf99c6a141275ae6 423 SUPERFAMILY SSF52777 192 422 2.18E-90 T 14-09-2016 AY555_RS04780 68ef28dcc4a88262bf99c6a141275ae6 423 PANTHER PTHR23151 3 423 1.5E-227 T 14-09-2016 AY555_RS04780 68ef28dcc4a88262bf99c6a141275ae6 423 Pfam PF00364 Biotin-requiring enzyme 4 76 3.1E-22 T 14-09-2016 IPR000089 Biotin/lipoyl attachment AY555_RS04780 68ef28dcc4a88262bf99c6a141275ae6 423 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 192 421 3.8E-82 T 14-09-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 AY555_RS04780 68ef28dcc4a88262bf99c6a141275ae6 423 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 14-09-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AY555_RS04780 68ef28dcc4a88262bf99c6a141275ae6 423 Gene3D G3DSA:4.10.320.10 126 166 1.1E-18 T 14-09-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 AY555_RS04780 68ef28dcc4a88262bf99c6a141275ae6 423 Gene3D G3DSA:3.30.559.10 186 421 3.1E-93 T 14-09-2016 IPR023213 Chloramphenicol acetyltransferase-like domain AY555_RS04780 68ef28dcc4a88262bf99c6a141275ae6 423 Gene3D G3DSA:2.40.50.100 1 95 2.9E-29 T 14-09-2016 AY555_RS09370 09679cb4c1aea477aa4cc0cef6fb8808 444 SUPERFAMILY SSF52540 120 361 8.95E-71 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS09370 09679cb4c1aea477aa4cc0cef6fb8808 444 Pfam PF00072 Response regulator receiver domain 19 106 3.9E-5 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS09370 09679cb4c1aea477aa4cc0cef6fb8808 444 Gene3D G3DSA:3.40.50.300 118 292 1.2E-55 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS09370 09679cb4c1aea477aa4cc0cef6fb8808 444 SUPERFAMILY SSF52172 20 164 8.97E-15 T 14-09-2016 IPR011006 CheY-like superfamily AY555_RS09370 09679cb4c1aea477aa4cc0cef6fb8808 444 SUPERFAMILY SSF46689 333 425 1.51E-12 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AY555_RS09370 09679cb4c1aea477aa4cc0cef6fb8808 444 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 144 157 - T 14-09-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AY555_RS09370 09679cb4c1aea477aa4cc0cef6fb8808 444 Pfam PF00158 Sigma-54 interaction domain 120 286 1.4E-69 T 14-09-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AY555_RS09370 09679cb4c1aea477aa4cc0cef6fb8808 444 Gene3D G3DSA:3.40.50.2300 15 117 4.5E-9 T 14-09-2016 AY555_RS09370 09679cb4c1aea477aa4cc0cef6fb8808 444 SMART SM00382 140 283 8.5E-9 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS09370 09679cb4c1aea477aa4cc0cef6fb8808 444 PANTHER PTHR32071:SF21 19 441 2.0E-180 T 14-09-2016 IPR029995 Transcriptional regulatory protein FlbD GO:0003700|GO:0006355 AY555_RS09370 09679cb4c1aea477aa4cc0cef6fb8808 444 SMART SM00448 1 109 0.0028 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS09370 09679cb4c1aea477aa4cc0cef6fb8808 444 PANTHER PTHR32071 19 441 2.0E-180 T 14-09-2016 AY555_RS09370 09679cb4c1aea477aa4cc0cef6fb8808 444 Gene3D G3DSA:1.10.8.60 293 347 9.9E-21 T 14-09-2016 AY555_RS09370 09679cb4c1aea477aa4cc0cef6fb8808 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 408 428 8.3E-7 T 14-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AY555_RS09370 09679cb4c1aea477aa4cc0cef6fb8808 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 391 408 8.3E-7 T 14-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AY555_RS09370 09679cb4c1aea477aa4cc0cef6fb8808 444 Gene3D G3DSA:1.10.10.60 348 425 8.3E-16 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AY555_RS09370 09679cb4c1aea477aa4cc0cef6fb8808 444 Pfam PF02954 Bacterial regulatory protein, Fis family 385 423 2.8E-14 T 14-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AY555_RS01230 18a92354f40b836be57911e4c2745381 1290 Gene3D G3DSA:1.20.5.550 20 59 4.1E-9 T 14-09-2016 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 AY555_RS01230 18a92354f40b836be57911e4c2745381 1290 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 67 180 1.2E-40 T 14-09-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 AY555_RS01230 18a92354f40b836be57911e4c2745381 1290 PIRSF PIRSF000197 9 1285 0.0 T 14-09-2016 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 AY555_RS01230 18a92354f40b836be57911e4c2745381 1290 PANTHER PTHR11699 535 1009 5.8E-165 T 14-09-2016 AY555_RS01230 18a92354f40b836be57911e4c2745381 1290 SUPERFAMILY SSF51730 183 525 7.06E-112 T 14-09-2016 IPR029041 FAD-linked oxidoreductase-like AY555_RS01230 18a92354f40b836be57911e4c2745381 1290 SUPERFAMILY SSF53720 541 1011 7.85E-126 T 14-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AY555_RS01230 18a92354f40b836be57911e4c2745381 1290 SUPERFAMILY SSF81935 14 182 8.24E-56 T 14-09-2016 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 AY555_RS01230 18a92354f40b836be57911e4c2745381 1290 Gene3D G3DSA:3.40.309.10 803 990 1.1E-42 T 14-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AY555_RS01230 18a92354f40b836be57911e4c2745381 1290 Pfam PF00171 Aldehyde dehydrogenase family 567 1009 6.3E-114 T 14-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AY555_RS01230 18a92354f40b836be57911e4c2745381 1290 Gene3D G3DSA:3.20.20.220 183 524 3.8E-101 T 14-09-2016 IPR029041 FAD-linked oxidoreductase-like AY555_RS01230 18a92354f40b836be57911e4c2745381 1290 SUPERFAMILY SSF53720 1044 1247 1.27E-5 T 14-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AY555_RS01230 18a92354f40b836be57911e4c2745381 1290 PANTHER PTHR11699:SF18 535 1009 5.8E-165 T 14-09-2016 AY555_RS01230 18a92354f40b836be57911e4c2745381 1290 Pfam PF01619 Proline dehydrogenase 190 483 1.1E-89 T 14-09-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|UniPathway: UPA00261 AY555_RS01230 18a92354f40b836be57911e4c2745381 1290 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 518 1012 3.1E-213 T 14-09-2016 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 AY555_RS01230 18a92354f40b836be57911e4c2745381 1290 Gene3D G3DSA:1.10.2060.10 63 181 1.3E-44 T 14-09-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 AY555_RS01230 18a92354f40b836be57911e4c2745381 1290 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 815 826 - T 14-09-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AY555_RS01230 18a92354f40b836be57911e4c2745381 1290 Gene3D G3DSA:3.40.605.10 561 802 7.0E-71 T 14-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AY555_RS02135 6975e9ad10e190246ff074087f8e4897 474 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 263 381 2.7E-11 T 14-09-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS02135 6975e9ad10e190246ff074087f8e4897 474 SUPERFAMILY SSF53738 11 167 3.69E-31 T 14-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS02135 6975e9ad10e190246ff074087f8e4897 474 SUPERFAMILY SSF53738 246 379 1.41E-6 T 14-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS02135 6975e9ad10e190246ff074087f8e4897 474 PANTHER PTHR22573 16 467 6.4E-51 T 14-09-2016 AY555_RS02135 6975e9ad10e190246ff074087f8e4897 474 Gene3D G3DSA:3.40.120.10 14 137 2.9E-30 T 14-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS02135 6975e9ad10e190246ff074087f8e4897 474 PANTHER PTHR22573:SF15 16 467 6.4E-51 T 14-09-2016 AY555_RS02135 6975e9ad10e190246ff074087f8e4897 474 Gene3D G3DSA:3.40.120.10 277 381 3.4E-4 T 14-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS02135 6975e9ad10e190246ff074087f8e4897 474 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 161 258 3.3E-8 T 14-09-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS02135 6975e9ad10e190246ff074087f8e4897 474 Gene3D G3DSA:3.30.310.50 421 467 2.4E-9 T 14-09-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS02135 6975e9ad10e190246ff074087f8e4897 474 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 15 132 2.8E-27 T 14-09-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS02135 6975e9ad10e190246ff074087f8e4897 474 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 424 465 2.8E-5 T 14-09-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS02135 6975e9ad10e190246ff074087f8e4897 474 SUPERFAMILY SSF55957 420 469 2.35E-10 T 14-09-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS02135 6975e9ad10e190246ff074087f8e4897 474 SUPERFAMILY SSF53738 160 260 2.79E-12 T 14-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AY555_RS09240 77b31fc2f1e23680b44553d7b370bc07 447 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 321 3.3E-82 T 14-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AY555_RS09240 77b31fc2f1e23680b44553d7b370bc07 447 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 14-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AY555_RS09240 77b31fc2f1e23680b44553d7b370bc07 447 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.5E-45 T 14-09-2016 IPR005481 Biotin carboxylase-like, N-terminal domain AY555_RS09240 77b31fc2f1e23680b44553d7b370bc07 447 SUPERFAMILY SSF52440 1 113 1.44E-49 T 14-09-2016 IPR016185 Pre-ATP-grasp domain AY555_RS09240 77b31fc2f1e23680b44553d7b370bc07 447 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 285 292 - T 14-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AY555_RS09240 77b31fc2f1e23680b44553d7b370bc07 447 Gene3D G3DSA:3.40.50.20 1 129 2.9E-50 T 14-09-2016 IPR016185 Pre-ATP-grasp domain AY555_RS09240 77b31fc2f1e23680b44553d7b370bc07 447 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 443 6.3E-213 T 14-09-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 AY555_RS09240 77b31fc2f1e23680b44553d7b370bc07 447 SUPERFAMILY SSF56059 83 343 2.12E-72 T 14-09-2016 AY555_RS09240 77b31fc2f1e23680b44553d7b370bc07 447 PANTHER PTHR18866 1 441 9.5E-292 T 14-09-2016 AY555_RS09240 77b31fc2f1e23680b44553d7b370bc07 447 SUPERFAMILY SSF51246 330 443 9.42E-43 T 14-09-2016 IPR011054 Rudiment single hybrid motif AY555_RS09240 77b31fc2f1e23680b44553d7b370bc07 447 Pfam PF02785 Biotin carboxylase C-terminal domain 335 441 4.8E-38 T 14-09-2016 IPR005482 Biotin carboxylase, C-terminal AY555_RS09240 77b31fc2f1e23680b44553d7b370bc07 447 Gene3D G3DSA:3.30.470.20 205 442 7.2E-98 T 14-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AY555_RS09240 77b31fc2f1e23680b44553d7b370bc07 447 Gene3D G3DSA:3.30.1490.20 130 202 8.9E-30 T 14-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AY555_RS09240 77b31fc2f1e23680b44553d7b370bc07 447 SMART SM00878 335 440 1.0E-62 T 14-09-2016 IPR005482 Biotin carboxylase, C-terminal AY555_RS07920 738d3f8bef043c2e3ffbd8d98b30147c 97 Gene3D G3DSA:1.10.287.1060 11 83 2.4E-4 T 14-09-2016 AY555_RS08225 fb827906a077c71e7658ed7b5ea3697e 324 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 3 324 69.675 T 14-09-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 AY555_RS08225 fb827906a077c71e7658ed7b5ea3697e 324 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 108 191 3.6E-34 T 14-09-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 AY555_RS08225 fb827906a077c71e7658ed7b5ea3697e 324 Gene3D G3DSA:3.40.47.10 162 323 5.3E-54 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AY555_RS08225 fb827906a077c71e7658ed7b5ea3697e 324 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 235 324 2.5E-35 T 14-09-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 AY555_RS08225 fb827906a077c71e7658ed7b5ea3697e 324 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 6 324 5.8E-126 T 14-09-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 AY555_RS08225 fb827906a077c71e7658ed7b5ea3697e 324 Gene3D G3DSA:3.40.47.10 4 161 7.6E-64 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AY555_RS08225 fb827906a077c71e7658ed7b5ea3697e 324 PANTHER PTHR18919 28 324 1.4E-128 T 14-09-2016 AY555_RS08225 fb827906a077c71e7658ed7b5ea3697e 324 SUPERFAMILY SSF53901 8 324 2.11E-71 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AY555_RS08225 fb827906a077c71e7658ed7b5ea3697e 324 PANTHER PTHR18919:SF109 28 324 1.4E-128 T 14-09-2016 AY555_RS08070 56820c1ced9b2e2359d6dae7594d4007 216 PANTHER PTHR10381 14 208 1.8E-140 T 14-09-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AY555_RS08070 56820c1ced9b2e2359d6dae7594d4007 216 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 13 202 3.5E-98 T 14-09-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AY555_RS08070 56820c1ced9b2e2359d6dae7594d4007 216 PANTHER PTHR10381:SF11 14 208 1.8E-140 T 14-09-2016 AY555_RS08070 56820c1ced9b2e2359d6dae7594d4007 216 PRINTS PR00127 Clp protease catalytic subunit P signature 101 118 3.9E-50 T 14-09-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AY555_RS08070 56820c1ced9b2e2359d6dae7594d4007 216 PRINTS PR00127 Clp protease catalytic subunit P signature 70 90 3.9E-50 T 14-09-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AY555_RS08070 56820c1ced9b2e2359d6dae7594d4007 216 PRINTS PR00127 Clp protease catalytic subunit P signature 30 45 3.9E-50 T 14-09-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AY555_RS08070 56820c1ced9b2e2359d6dae7594d4007 216 PRINTS PR00127 Clp protease catalytic subunit P signature 122 141 3.9E-50 T 14-09-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AY555_RS08070 56820c1ced9b2e2359d6dae7594d4007 216 PRINTS PR00127 Clp protease catalytic subunit P signature 179 198 3.9E-50 T 14-09-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AY555_RS08070 56820c1ced9b2e2359d6dae7594d4007 216 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 14 204 42.707 T 14-09-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AY555_RS08070 56820c1ced9b2e2359d6dae7594d4007 216 Pfam PF00574 Clp protease 24 203 3.9E-86 T 14-09-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AY555_RS08070 56820c1ced9b2e2359d6dae7594d4007 216 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 101 112 - T 14-09-2016 IPR018215 ClpP, Ser active site AY555_RS08070 56820c1ced9b2e2359d6dae7594d4007 216 Gene3D G3DSA:3.90.226.10 14 203 5.6E-86 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AY555_RS08070 56820c1ced9b2e2359d6dae7594d4007 216 SUPERFAMILY SSF52096 21 204 6.22E-73 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AY555_RS08070 56820c1ced9b2e2359d6dae7594d4007 216 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 123 136 - T 14-09-2016 IPR033135 ClpP, histidine active site AY555_RS01000 2bd486763a01d341ed67836667cb9a04 1393 Gene3D G3DSA:3.90.1100.10 481 627 2.2E-150 T 14-09-2016 AY555_RS01000 2bd486763a01d341ed67836667cb9a04 1393 Gene3D G3DSA:3.90.1100.10 695 749 2.2E-150 T 14-09-2016 AY555_RS01000 2bd486763a01d341ed67836667cb9a04 1393 Gene3D G3DSA:3.90.1100.10 21 157 2.2E-150 T 14-09-2016 AY555_RS01000 2bd486763a01d341ed67836667cb9a04 1393 Gene3D G3DSA:3.90.1110.10 159 261 1.5E-63 T 14-09-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AY555_RS01000 2bd486763a01d341ed67836667cb9a04 1393 Gene3D G3DSA:3.90.1110.10 379 480 1.5E-63 T 14-09-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AY555_RS01000 2bd486763a01d341ed67836667cb9a04 1393 Pfam PF04561 RNA polymerase Rpb2, domain 2 388 490 1.0E-17 T 14-09-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AY555_RS01000 2bd486763a01d341ed67836667cb9a04 1393 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1391 12.46 T 14-09-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AY555_RS01000 2bd486763a01d341ed67836667cb9a04 1393 PANTHER PTHR20856 1081 1176 0.0 T 14-09-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AY555_RS01000 2bd486763a01d341ed67836667cb9a04 1393 PANTHER PTHR20856 778 965 0.0 T 14-09-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AY555_RS01000 2bd486763a01d341ed67836667cb9a04 1393 PANTHER PTHR20856 1231 1393 0.0 T 14-09-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AY555_RS01000 2bd486763a01d341ed67836667cb9a04 1393 PANTHER PTHR20856 1 237 0.0 T 14-09-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AY555_RS01000 2bd486763a01d341ed67836667cb9a04 1393 PANTHER PTHR20856:SF20 1231 1393 0.0 T 14-09-2016 AY555_RS01000 2bd486763a01d341ed67836667cb9a04 1393 SUPERFAMILY SSF64484 12 233 0.0 T 14-09-2016 AY555_RS01000 2bd486763a01d341ed67836667cb9a04 1393 SUPERFAMILY SSF64484 376 974 0.0 T 14-09-2016 AY555_RS01000 2bd486763a01d341ed67836667cb9a04 1393 SUPERFAMILY SSF64484 1087 1392 0.0 T 14-09-2016 AY555_RS01000 2bd486763a01d341ed67836667cb9a04 1393 Pfam PF10385 RNA polymerase beta subunit external 1 domain 627 692 3.3E-25 T 14-09-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AY555_RS01000 2bd486763a01d341ed67836667cb9a04 1393 Pfam PF00562 RNA polymerase Rpb2, domain 6 754 1313 1.8E-166 T 14-09-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AY555_RS01000 2bd486763a01d341ed67836667cb9a04 1393 Pfam PF04565 RNA polymerase Rpb2, domain 3 549 617 8.3E-32 T 14-09-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AY555_RS01000 2bd486763a01d341ed67836667cb9a04 1393 Gene3D G3DSA:2.40.270.10 828 855 1.2E-87 T 14-09-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AY555_RS01000 2bd486763a01d341ed67836667cb9a04 1393 Gene3D G3DSA:2.40.270.10 1108 1291 1.2E-87 T 14-09-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AY555_RS01000 2bd486763a01d341ed67836667cb9a04 1393 Gene3D G3DSA:2.40.50.100 751 827 1.4E-28 T 14-09-2016 AY555_RS01000 2bd486763a01d341ed67836667cb9a04 1393 PANTHER PTHR20856:SF20 1081 1176 0.0 T 14-09-2016 AY555_RS01000 2bd486763a01d341ed67836667cb9a04 1393 PANTHER PTHR20856:SF20 778 965 0.0 T 14-09-2016 AY555_RS01000 2bd486763a01d341ed67836667cb9a04 1393 PANTHER PTHR20856:SF20 1 237 0.0 T 14-09-2016 AY555_RS01000 2bd486763a01d341ed67836667cb9a04 1393 Gene3D G3DSA:2.30.150.10 628 692 1.7E-27 T 14-09-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AY555_RS01000 2bd486763a01d341ed67836667cb9a04 1393 Pfam PF04560 RNA polymerase Rpb2, domain 7 1315 1389 1.4E-26 T 14-09-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AY555_RS01000 2bd486763a01d341ed67836667cb9a04 1393 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 9 1388 0.0 T 14-09-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AY555_RS01000 2bd486763a01d341ed67836667cb9a04 1393 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1111 1123 - T 14-09-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AY555_RS01000 2bd486763a01d341ed67836667cb9a04 1393 Pfam PF04563 RNA polymerase beta subunit 27 533 2.1E-33 T 14-09-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AY555_RS01000 2bd486763a01d341ed67836667cb9a04 1393 PANTHER PTHR20856:SF20 373 761 0.0 T 14-09-2016 AY555_RS01000 2bd486763a01d341ed67836667cb9a04 1393 PANTHER PTHR20856 373 761 0.0 T 14-09-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AY555_RS01000 2bd486763a01d341ed67836667cb9a04 1393 Gene3D G3DSA:2.40.50.150 862 972 3.5E-57 T 14-09-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AY555_RS01000 2bd486763a01d341ed67836667cb9a04 1393 Gene3D G3DSA:2.40.50.150 1093 1107 3.5E-57 T 14-09-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AY555_RS08850 951c0de44b38cf5ea60b9f812fc63920 90 PANTHER PTHR33175 1 89 5.9E-40 T 14-09-2016 AY555_RS08850 951c0de44b38cf5ea60b9f812fc63920 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 14-09-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AY555_RS08850 951c0de44b38cf5ea60b9f812fc63920 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.5E-16 T 14-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AY555_RS08850 951c0de44b38cf5ea60b9f812fc63920 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.5E-16 T 14-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AY555_RS08850 951c0de44b38cf5ea60b9f812fc63920 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.5E-16 T 14-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AY555_RS08850 951c0de44b38cf5ea60b9f812fc63920 90 Gene3D G3DSA:4.10.520.10 1 90 1.4E-35 T 14-09-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AY555_RS08850 951c0de44b38cf5ea60b9f812fc63920 90 Pfam PF00216 Bacterial DNA-binding protein 1 89 3.2E-33 T 14-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AY555_RS08850 951c0de44b38cf5ea60b9f812fc63920 90 SMART SM00411 1 90 6.0E-42 T 14-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AY555_RS08850 951c0de44b38cf5ea60b9f812fc63920 90 SUPERFAMILY SSF47729 1 90 3.83E-31 T 14-09-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AY555_RS01480 62980a2497c1f39190e3f148d3e485c2 320 Pfam PF00140 Sigma-70 factor, region 1.2 18 42 6.8E-6 T 14-09-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AY555_RS01480 62980a2497c1f39190e3f148d3e485c2 320 PRINTS PR00046 Major sigma-70 factor signature 237 249 7.8E-25 T 14-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AY555_RS01480 62980a2497c1f39190e3f148d3e485c2 320 PRINTS PR00046 Major sigma-70 factor signature 271 282 7.8E-25 T 14-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AY555_RS01480 62980a2497c1f39190e3f148d3e485c2 320 PRINTS PR00046 Major sigma-70 factor signature 104 112 7.8E-25 T 14-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AY555_RS01480 62980a2497c1f39190e3f148d3e485c2 320 PRINTS PR00046 Major sigma-70 factor signature 256 271 7.8E-25 T 14-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AY555_RS01480 62980a2497c1f39190e3f148d3e485c2 320 PRINTS PR00046 Major sigma-70 factor signature 80 93 7.8E-25 T 14-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AY555_RS01480 62980a2497c1f39190e3f148d3e485c2 320 SUPERFAMILY SSF88946 17 124 1.27E-36 T 14-09-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AY555_RS01480 62980a2497c1f39190e3f148d3e485c2 320 SUPERFAMILY SSF88659 195 288 2.99E-17 T 14-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AY555_RS01480 62980a2497c1f39190e3f148d3e485c2 320 Pfam PF04542 Sigma-70 region 2 56 120 1.2E-16 T 14-09-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AY555_RS01480 62980a2497c1f39190e3f148d3e485c2 320 Gene3D G3DSA:1.10.601.10 17 121 3.3E-37 T 14-09-2016 AY555_RS01480 62980a2497c1f39190e3f148d3e485c2 320 Gene3D G3DSA:1.10.10.10 229 287 9.9E-19 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS01480 62980a2497c1f39190e3f148d3e485c2 320 PANTHER PTHR30376 5 293 2.3E-85 T 14-09-2016 AY555_RS01480 62980a2497c1f39190e3f148d3e485c2 320 Pfam PF04545 Sigma-70, region 4 233 282 1.5E-16 T 14-09-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AY555_RS01480 62980a2497c1f39190e3f148d3e485c2 320 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 53 285 7.5E-30 T 14-09-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AY555_RS09215 4e42baa834ec185b530fdfbb0756054b 427 PANTHER PTHR30435 127 142 2.3E-41 T 14-09-2016 AY555_RS09215 4e42baa834ec185b530fdfbb0756054b 427 SUPERFAMILY SSF117143 80 388 9.02E-38 T 14-09-2016 AY555_RS09215 4e42baa834ec185b530fdfbb0756054b 427 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 6 408 6.6E-59 T 14-09-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AY555_RS09215 4e42baa834ec185b530fdfbb0756054b 427 PANTHER PTHR30435 1 111 2.3E-41 T 14-09-2016 AY555_RS09215 4e42baa834ec185b530fdfbb0756054b 427 PANTHER PTHR30435 304 423 2.3E-41 T 14-09-2016 AY555_RS09215 4e42baa834ec185b530fdfbb0756054b 427 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 349 424 2.8E-12 T 14-09-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AY555_RS09215 4e42baa834ec185b530fdfbb0756054b 427 PANTHER PTHR30435:SF1 1 111 2.3E-41 T 14-09-2016 AY555_RS09215 4e42baa834ec185b530fdfbb0756054b 427 PANTHER PTHR30435:SF1 304 423 2.3E-41 T 14-09-2016 AY555_RS09215 4e42baa834ec185b530fdfbb0756054b 427 PANTHER PTHR30435:SF1 127 142 2.3E-41 T 14-09-2016 AY555_RS09215 4e42baa834ec185b530fdfbb0756054b 427 Pfam PF00460 Flagella basal body rod protein 7 37 1.4E-4 T 14-09-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AY555_RS00590 7e32fb0791cd363b7b2ab8a0a79f3487 358 Gene3D G3DSA:3.20.20.70 4 357 1.7E-132 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS00590 7e32fb0791cd363b7b2ab8a0a79f3487 358 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 81 100 - T 14-09-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 AY555_RS00590 7e32fb0791cd363b7b2ab8a0a79f3487 358 PANTHER PTHR11938:SF47 1 355 2.0E-104 T 14-09-2016 AY555_RS00590 7e32fb0791cd363b7b2ab8a0a79f3487 358 SUPERFAMILY SSF51395 5 356 7.02E-105 T 14-09-2016 AY555_RS00590 7e32fb0791cd363b7b2ab8a0a79f3487 358 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 14-09-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 AY555_RS00590 7e32fb0791cd363b7b2ab8a0a79f3487 358 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 13 356 1.3E-120 T 14-09-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AY555_RS00590 7e32fb0791cd363b7b2ab8a0a79f3487 358 Pfam PF01180 Dihydroorotate dehydrogenase 46 336 4.2E-97 T 14-09-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 AY555_RS00590 7e32fb0791cd363b7b2ab8a0a79f3487 358 PANTHER PTHR11938 1 355 2.0E-104 T 14-09-2016 AY555_RS00590 7e32fb0791cd363b7b2ab8a0a79f3487 358 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 6 336 41.797 T 14-09-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AY555_RS04515 77547d39e83678aa15065366e9eb7241 132 SMART SM00530 12 66 2.6E-10 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AY555_RS04515 77547d39e83678aa15065366e9eb7241 132 SUPERFAMILY SSF47413 4 72 2.08E-10 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AY555_RS04515 77547d39e83678aa15065366e9eb7241 132 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 12 64 2.5E-8 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AY555_RS04515 77547d39e83678aa15065366e9eb7241 132 Gene3D G3DSA:1.10.260.40 9 72 2.3E-12 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AY555_RS02885 77547d39e83678aa15065366e9eb7241 132 SMART SM00530 12 66 2.6E-10 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AY555_RS02885 77547d39e83678aa15065366e9eb7241 132 SUPERFAMILY SSF47413 4 72 2.08E-10 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AY555_RS02885 77547d39e83678aa15065366e9eb7241 132 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 12 64 2.5E-8 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AY555_RS02885 77547d39e83678aa15065366e9eb7241 132 Gene3D G3DSA:1.10.260.40 9 72 2.3E-12 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AY555_RS07930 0f1c4c075f58dc88c2eef1e233abb210 205 PANTHER PTHR11839:SF5 9 204 6.3E-59 T 14-09-2016 AY555_RS07930 0f1c4c075f58dc88c2eef1e233abb210 205 Pfam PF00293 NUDIX domain 50 132 2.6E-11 T 14-09-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AY555_RS07930 0f1c4c075f58dc88c2eef1e233abb210 205 SUPERFAMILY SSF55811 15 195 1.49E-39 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AY555_RS07930 0f1c4c075f58dc88c2eef1e233abb210 205 Gene3D G3DSA:3.90.79.10 8 196 2.4E-47 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AY555_RS07930 0f1c4c075f58dc88c2eef1e233abb210 205 PANTHER PTHR11839 9 204 6.3E-59 T 14-09-2016 AY555_RS07930 0f1c4c075f58dc88c2eef1e233abb210 205 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 9 192 3.8E-43 T 14-09-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 AY555_RS09020 cd246eb8d21fcbb91f57695042bc3e7e 332 Pfam PF00107 Zinc-binding dehydrogenase 157 276 3.5E-27 T 14-09-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AY555_RS09020 cd246eb8d21fcbb91f57695042bc3e7e 332 SUPERFAMILY SSF50129 7 146 1.83E-34 T 14-09-2016 IPR011032 GroES-like AY555_RS09020 cd246eb8d21fcbb91f57695042bc3e7e 332 PANTHER PTHR11695:SF610 21 328 1.3E-115 T 14-09-2016 AY555_RS09020 cd246eb8d21fcbb91f57695042bc3e7e 332 Gene3D G3DSA:3.40.50.720 151 266 1.9E-28 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS09020 cd246eb8d21fcbb91f57695042bc3e7e 332 PANTHER PTHR11695 21 328 1.3E-115 T 14-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AY555_RS09020 cd246eb8d21fcbb91f57695042bc3e7e 332 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 34 93 1.4E-6 T 14-09-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AY555_RS09020 cd246eb8d21fcbb91f57695042bc3e7e 332 Gene3D G3DSA:3.90.180.10 6 150 1.5E-43 T 14-09-2016 IPR011032 GroES-like AY555_RS09020 cd246eb8d21fcbb91f57695042bc3e7e 332 SUPERFAMILY SSF51735 119 293 2.35E-46 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS09020 cd246eb8d21fcbb91f57695042bc3e7e 332 SMART SM00829 16 327 2.5E-47 T 14-09-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AY555_RS09020 cd246eb8d21fcbb91f57695042bc3e7e 332 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 7 328 1.3E-127 T 14-09-2016 IPR014189 Quinone oxidoreductase PIG3 KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- AY555_RS06995 02af1a12fee84566a99c647d8166e691 120 SUPERFAMILY SSF46626 19 119 1.89E-33 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AY555_RS06995 02af1a12fee84566a99c647d8166e691 120 PANTHER PTHR11961 12 116 7.2E-31 T 14-09-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AY555_RS06995 02af1a12fee84566a99c647d8166e691 120 PANTHER PTHR11961:SF6 12 116 7.2E-31 T 14-09-2016 AY555_RS06995 02af1a12fee84566a99c647d8166e691 120 PRINTS PR00604 Class IA and IB cytochrome C signature 93 103 3.1E-19 T 14-09-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AY555_RS06995 02af1a12fee84566a99c647d8166e691 120 PRINTS PR00604 Class IA and IB cytochrome C signature 110 118 3.1E-19 T 14-09-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AY555_RS06995 02af1a12fee84566a99c647d8166e691 120 PRINTS PR00604 Class IA and IB cytochrome C signature 31 38 3.1E-19 T 14-09-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AY555_RS06995 02af1a12fee84566a99c647d8166e691 120 PRINTS PR00604 Class IA and IB cytochrome C signature 74 90 3.1E-19 T 14-09-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AY555_RS06995 02af1a12fee84566a99c647d8166e691 120 PRINTS PR00604 Class IA and IB cytochrome C signature 44 59 3.1E-19 T 14-09-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AY555_RS06995 02af1a12fee84566a99c647d8166e691 120 PRINTS PR00604 Class IA and IB cytochrome C signature 60 70 3.1E-19 T 14-09-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AY555_RS06995 02af1a12fee84566a99c647d8166e691 120 Pfam PF00034 Cytochrome c 22 119 4.2E-11 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AY555_RS06995 02af1a12fee84566a99c647d8166e691 120 Gene3D G3DSA:1.10.760.10 19 119 2.8E-38 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AY555_RS02265 2f6a15ed49ebe8a28b9220a647d02d35 197 SMART SM00493 79 164 0.0084 T 14-09-2016 IPR006171 Toprim domain AY555_RS02265 2f6a15ed49ebe8a28b9220a647d02d35 197 TIGRFAM TIGR00615 recR: recombination protein RecR 3 195 3.5E-61 T 14-09-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AY555_RS02265 2f6a15ed49ebe8a28b9220a647d02d35 197 PANTHER PTHR30446:SF0 1 197 4.5E-81 T 14-09-2016 AY555_RS02265 2f6a15ed49ebe8a28b9220a647d02d35 197 PANTHER PTHR30446 1 197 4.5E-81 T 14-09-2016 AY555_RS02265 2f6a15ed49ebe8a28b9220a647d02d35 197 Pfam PF02132 RecR protein 41 77 8.3E-11 T 14-09-2016 IPR023628 Recombination protein RecR, C4-type zinc finger AY555_RS02265 2f6a15ed49ebe8a28b9220a647d02d35 197 ProSitePatterns PS01300 RecR protein signature. 56 77 - T 14-09-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 AY555_RS02265 2f6a15ed49ebe8a28b9220a647d02d35 197 Pfam PF13662 Toprim domain 79 164 4.0E-20 T 14-09-2016 IPR006171 Toprim domain AY555_RS02265 2f6a15ed49ebe8a28b9220a647d02d35 197 Hamap MF_00017 Recombination protein RecR [recR]. 1 197 85.773 T 14-09-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AY555_RS02265 2f6a15ed49ebe8a28b9220a647d02d35 197 SUPERFAMILY SSF111304 3 197 7.98E-65 T 14-09-2016 IPR023627 Recombination protein RecR AY555_RS01995 6e2389940a45f22655610eee32c718db 208 PANTHER PTHR39321 13 165 1.8E-27 T 14-09-2016 AY555_RS01995 6e2389940a45f22655610eee32c718db 208 PANTHER PTHR39321 181 207 1.8E-27 T 14-09-2016 AY555_RS01995 6e2389940a45f22655610eee32c718db 208 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 16 204 19.701 T 14-09-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 AY555_RS01995 6e2389940a45f22655610eee32c718db 208 Gene3D G3DSA:3.40.50.620 16 203 7.4E-38 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS01995 6e2389940a45f22655610eee32c718db 208 SUPERFAMILY SSF52374 16 200 7.82E-36 T 14-09-2016 AY555_RS01995 6e2389940a45f22655610eee32c718db 208 Pfam PF01467 Cytidylyltransferase-like 20 198 4.5E-17 T 14-09-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AY555_RS09730 f83ef1155b2268ca377559694233ec29 292 Gene3D G3DSA:1.20.58.180 210 286 1.4E-35 T 14-09-2016 AY555_RS09730 f83ef1155b2268ca377559694233ec29 292 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 59 74 2.2E-69 T 14-09-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AY555_RS09730 f83ef1155b2268ca377559694233ec29 292 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 246 262 2.2E-69 T 14-09-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AY555_RS09730 f83ef1155b2268ca377559694233ec29 292 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 80 100 2.2E-69 T 14-09-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AY555_RS09730 f83ef1155b2268ca377559694233ec29 292 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 137 157 2.2E-69 T 14-09-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AY555_RS09730 f83ef1155b2268ca377559694233ec29 292 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 160 175 2.2E-69 T 14-09-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AY555_RS09730 f83ef1155b2268ca377559694233ec29 292 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 111 135 2.2E-69 T 14-09-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AY555_RS09730 f83ef1155b2268ca377559694233ec29 292 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 5 286 59.949 T 14-09-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AY555_RS09730 f83ef1155b2268ca377559694233ec29 292 SUPERFAMILY SSF55681 6 283 2.98E-137 T 14-09-2016 AY555_RS09730 f83ef1155b2268ca377559694233ec29 292 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 6 285 6.9E-150 T 14-09-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AY555_RS09730 f83ef1155b2268ca377559694233ec29 292 PANTHER PTHR30075 6 284 5.7E-236 T 14-09-2016 AY555_RS09730 f83ef1155b2268ca377559694233ec29 292 Gene3D G3DSA:3.30.930.10 3 208 9.0E-107 T 14-09-2016 AY555_RS09730 f83ef1155b2268ca377559694233ec29 292 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 7 284 2.3E-152 T 14-09-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AY555_RS03835 b8394344f8feb9794192ba18fc2dd8bc 359 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 149 165 - T 14-09-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 AY555_RS03835 b8394344f8feb9794192ba18fc2dd8bc 359 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 15 352 1.7E-116 T 14-09-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 AY555_RS03835 b8394344f8feb9794192ba18fc2dd8bc 359 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 30 39 - T 14-09-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 AY555_RS03835 b8394344f8feb9794192ba18fc2dd8bc 359 SUPERFAMILY SSF51726 14 353 5.58E-102 T 14-09-2016 AY555_RS03835 b8394344f8feb9794192ba18fc2dd8bc 359 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 14 354 47.689 T 14-09-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 AY555_RS03835 b8394344f8feb9794192ba18fc2dd8bc 359 PANTHER PTHR21091 18 353 2.0E-118 T 14-09-2016 AY555_RS03835 b8394344f8feb9794192ba18fc2dd8bc 359 Gene3D G3DSA:3.20.20.210 15 353 3.4E-129 T 14-09-2016 AY555_RS03835 b8394344f8feb9794192ba18fc2dd8bc 359 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 17 352 2.9E-127 T 14-09-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 AY555_RS03835 b8394344f8feb9794192ba18fc2dd8bc 359 PANTHER PTHR21091:SF2 18 353 2.0E-118 T 14-09-2016 AY555_RS05690 37adbdb77ee9cdb5902435275ba26820 184 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 25 47 - T 14-09-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 AY555_RS05690 37adbdb77ee9cdb5902435275ba26820 184 PANTHER PTHR22778:SF16 14 156 1.6E-37 T 14-09-2016 AY555_RS05690 37adbdb77ee9cdb5902435275ba26820 184 PANTHER PTHR22778 14 156 1.6E-37 T 14-09-2016 AY555_RS05690 37adbdb77ee9cdb5902435275ba26820 184 SUPERFAMILY SSF53597 13 162 2.95E-52 T 14-09-2016 IPR024072 Dihydrofolate reductase-like domain AY555_RS05690 37adbdb77ee9cdb5902435275ba26820 184 Gene3D G3DSA:3.40.430.10 11 176 4.4E-55 T 14-09-2016 IPR024072 Dihydrofolate reductase-like domain AY555_RS05690 37adbdb77ee9cdb5902435275ba26820 184 Pfam PF00186 Dihydrofolate reductase 14 174 7.4E-51 T 14-09-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 AY555_RS05690 37adbdb77ee9cdb5902435275ba26820 184 PRINTS PR00070 Dihydrofolate reductase signature 109 123 2.1E-13 T 14-09-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 AY555_RS05690 37adbdb77ee9cdb5902435275ba26820 184 PRINTS PR00070 Dihydrofolate reductase signature 39 47 2.1E-13 T 14-09-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 AY555_RS05690 37adbdb77ee9cdb5902435275ba26820 184 PRINTS PR00070 Dihydrofolate reductase signature 25 35 2.1E-13 T 14-09-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 AY555_RS05690 37adbdb77ee9cdb5902435275ba26820 184 PRINTS PR00070 Dihydrofolate reductase signature 52 63 2.1E-13 T 14-09-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 AY555_RS05690 37adbdb77ee9cdb5902435275ba26820 184 PIRSF PIRSF000194 9 182 2.2E-54 T 14-09-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 AY555_RS05935 65c023be0060c3bc00eaa1174253fb91 486 SUPERFAMILY SSF46689 434 476 5.38E-7 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AY555_RS05935 65c023be0060c3bc00eaa1174253fb91 486 Pfam PF02954 Bacterial regulatory protein, Fis family 440 476 4.7E-10 T 14-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AY555_RS05935 65c023be0060c3bc00eaa1174253fb91 486 Gene3D G3DSA:3.40.50.300 142 315 1.7E-60 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS05935 65c023be0060c3bc00eaa1174253fb91 486 Gene3D G3DSA:3.40.50.2300 2 126 9.1E-32 T 14-09-2016 AY555_RS05935 65c023be0060c3bc00eaa1174253fb91 486 PANTHER PTHR32071 1 486 1.7E-172 T 14-09-2016 AY555_RS05935 65c023be0060c3bc00eaa1174253fb91 486 SMART SM00448 3 112 2.4E-31 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS05935 65c023be0060c3bc00eaa1174253fb91 486 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 229 244 - T 14-09-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AY555_RS05935 65c023be0060c3bc00eaa1174253fb91 486 Gene3D G3DSA:1.10.10.60 438 476 1.3E-10 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AY555_RS05935 65c023be0060c3bc00eaa1174253fb91 486 SUPERFAMILY SSF52540 143 386 8.69E-71 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS05935 65c023be0060c3bc00eaa1174253fb91 486 Pfam PF00158 Sigma-54 interaction domain 144 310 3.6E-68 T 14-09-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AY555_RS05935 65c023be0060c3bc00eaa1174253fb91 486 PANTHER PTHR32071:SF33 1 486 1.7E-172 T 14-09-2016 AY555_RS05935 65c023be0060c3bc00eaa1174253fb91 486 Gene3D G3DSA:1.10.8.60 316 394 6.3E-18 T 14-09-2016 AY555_RS05935 65c023be0060c3bc00eaa1174253fb91 486 SMART SM00382 163 306 2.5E-11 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS05935 65c023be0060c3bc00eaa1174253fb91 486 Pfam PF00072 Response regulator receiver domain 5 110 1.2E-24 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS05935 65c023be0060c3bc00eaa1174253fb91 486 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 356 365 - T 14-09-2016 IPR025944 Sigma-54 interaction domain, conserved site AY555_RS05935 65c023be0060c3bc00eaa1174253fb91 486 SUPERFAMILY SSF52172 4 187 1.57E-39 T 14-09-2016 IPR011006 CheY-like superfamily AY555_RS07005 1d0994d70cb687dda6b2982d693acddb 432 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 250 284 7.0E-5 T 14-09-2016 IPR001451 Hexapeptide repeat AY555_RS07005 1d0994d70cb687dda6b2982d693acddb 432 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 286 320 7.2E-4 T 14-09-2016 IPR001451 Hexapeptide repeat AY555_RS07005 1d0994d70cb687dda6b2982d693acddb 432 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 364 397 4.8E-7 T 14-09-2016 IPR001451 Hexapeptide repeat AY555_RS07005 1d0994d70cb687dda6b2982d693acddb 432 PANTHER PTHR22572:SF115 1 417 1.7E-152 T 14-09-2016 AY555_RS07005 1d0994d70cb687dda6b2982d693acddb 432 Gene3D G3DSA:3.90.550.10 1 228 2.1E-50 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AY555_RS07005 1d0994d70cb687dda6b2982d693acddb 432 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 1 420 33.982 T 14-09-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 AY555_RS07005 1d0994d70cb687dda6b2982d693acddb 432 Gene3D G3DSA:2.160.10.10 229 302 8.8E-15 T 14-09-2016 AY555_RS07005 1d0994d70cb687dda6b2982d693acddb 432 SUPERFAMILY SSF51161 236 405 1.51E-44 T 14-09-2016 IPR011004 Trimeric LpxA-like AY555_RS07005 1d0994d70cb687dda6b2982d693acddb 432 SUPERFAMILY SSF53448 1 237 4.73E-46 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AY555_RS07005 1d0994d70cb687dda6b2982d693acddb 432 Pfam PF12804 MobA-like NTP transferase domain 5 121 8.1E-14 T 14-09-2016 IPR025877 MobA-like NTP transferase AY555_RS07005 1d0994d70cb687dda6b2982d693acddb 432 PANTHER PTHR22572 1 417 1.7E-152 T 14-09-2016 AY555_RS07005 1d0994d70cb687dda6b2982d693acddb 432 Gene3D G3DSA:2.160.10.10 303 427 8.4E-30 T 14-09-2016 AY555_RS07005 1d0994d70cb687dda6b2982d693acddb 432 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 294 322 - T 14-09-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 AY555_RS07005 1d0994d70cb687dda6b2982d693acddb 432 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 1 420 5.3E-138 T 14-09-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 AY555_RS01770 1b25973b08a8e307629dd560f0c97378 163 Gene3D G3DSA:3.40.50.2020 12 151 6.7E-36 T 14-09-2016 IPR029057 Phosphoribosyltransferase-like AY555_RS01770 1b25973b08a8e307629dd560f0c97378 163 PANTHER PTHR39563 7 161 2.7E-48 T 14-09-2016 AY555_RS01770 1b25973b08a8e307629dd560f0c97378 163 SUPERFAMILY SSF53271 12 151 1.85E-26 T 14-09-2016 IPR029057 Phosphoribosyltransferase-like AY555_RS01770 1b25973b08a8e307629dd560f0c97378 163 Pfam PF00156 Phosphoribosyl transferase domain 36 142 1.5E-11 T 14-09-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 AY555_RS08300 ec8d7b4367c10b9d008928dccef5eda0 459 Pfam PF02080 TrkA-C domain 386 452 8.5E-15 T 14-09-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AY555_RS08300 ec8d7b4367c10b9d008928dccef5eda0 459 Pfam PF02080 TrkA-C domain 161 228 1.6E-8 T 14-09-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AY555_RS08300 ec8d7b4367c10b9d008928dccef5eda0 459 Gene3D G3DSA:3.30.70.1450 386 454 2.1E-9 T 14-09-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AY555_RS08300 ec8d7b4367c10b9d008928dccef5eda0 459 Gene3D G3DSA:3.30.70.1450 157 228 2.6E-4 T 14-09-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AY555_RS08300 ec8d7b4367c10b9d008928dccef5eda0 459 Gene3D G3DSA:3.40.50.720 1 153 7.2E-42 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS08300 ec8d7b4367c10b9d008928dccef5eda0 459 Gene3D G3DSA:3.40.50.720 235 381 3.0E-33 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS08300 ec8d7b4367c10b9d008928dccef5eda0 459 PANTHER PTHR13789:SF225 434 458 4.7E-43 T 14-09-2016 AY555_RS08300 ec8d7b4367c10b9d008928dccef5eda0 459 PANTHER PTHR13789:SF225 1 172 4.7E-43 T 14-09-2016 AY555_RS08300 ec8d7b4367c10b9d008928dccef5eda0 459 SUPERFAMILY SSF51735 235 381 5.15E-29 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS08300 ec8d7b4367c10b9d008928dccef5eda0 459 SUPERFAMILY SSF116726 367 452 9.68E-15 T 14-09-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AY555_RS08300 ec8d7b4367c10b9d008928dccef5eda0 459 SUPERFAMILY SSF51735 1 153 1.8E-33 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS08300 ec8d7b4367c10b9d008928dccef5eda0 459 PANTHER PTHR13789 434 458 4.7E-43 T 14-09-2016 AY555_RS08300 ec8d7b4367c10b9d008928dccef5eda0 459 PANTHER PTHR13789 1 172 4.7E-43 T 14-09-2016 AY555_RS08300 ec8d7b4367c10b9d008928dccef5eda0 459 SUPERFAMILY SSF116726 137 228 2.88E-11 T 14-09-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AY555_RS08300 ec8d7b4367c10b9d008928dccef5eda0 459 PRINTS PR00335 TrkA potassium uptake protein signature 61 71 1.4E-17 T 14-09-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AY555_RS08300 ec8d7b4367c10b9d008928dccef5eda0 459 PRINTS PR00335 TrkA potassium uptake protein signature 50 60 1.4E-17 T 14-09-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AY555_RS08300 ec8d7b4367c10b9d008928dccef5eda0 459 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 1.4E-17 T 14-09-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AY555_RS08300 ec8d7b4367c10b9d008928dccef5eda0 459 PRINTS PR00335 TrkA potassium uptake protein signature 74 88 1.4E-17 T 14-09-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AY555_RS08300 ec8d7b4367c10b9d008928dccef5eda0 459 Pfam PF02254 TrkA-N domain 237 355 1.1E-19 T 14-09-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AY555_RS08300 ec8d7b4367c10b9d008928dccef5eda0 459 Pfam PF02254 TrkA-N domain 3 127 2.6E-26 T 14-09-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AY555_RS00755 57bd1f44e8404143e957c9872cb6b701 381 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 14-09-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AY555_RS00755 57bd1f44e8404143e957c9872cb6b701 381 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 375 4.5E-49 T 14-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AY555_RS00755 57bd1f44e8404143e957c9872cb6b701 381 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 122 134 - T 14-09-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AY555_RS00755 57bd1f44e8404143e957c9872cb6b701 381 SUPERFAMILY SSF47203 226 376 5.48E-56 T 14-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AY555_RS00755 57bd1f44e8404143e957c9872cb6b701 381 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 5 115 1.2E-35 T 14-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AY555_RS00755 57bd1f44e8404143e957c9872cb6b701 381 Gene3D G3DSA:1.10.540.10 3 116 1.3E-39 T 14-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AY555_RS00755 57bd1f44e8404143e957c9872cb6b701 381 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 214 7.8E-26 T 14-09-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AY555_RS00755 57bd1f44e8404143e957c9872cb6b701 381 Gene3D G3DSA:2.40.110.10 119 214 1.4E-38 T 14-09-2016 AY555_RS00755 57bd1f44e8404143e957c9872cb6b701 381 PANTHER PTHR10909 1 378 5.6E-169 T 14-09-2016 AY555_RS00755 57bd1f44e8404143e957c9872cb6b701 381 PANTHER PTHR10909:SF305 1 378 5.6E-169 T 14-09-2016 AY555_RS00755 57bd1f44e8404143e957c9872cb6b701 381 Gene3D G3DSA:1.20.140.10 215 377 1.1E-65 T 14-09-2016 AY555_RS00755 57bd1f44e8404143e957c9872cb6b701 381 SUPERFAMILY SSF56645 3 240 1.03E-80 T 14-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AY555_RS09430 38669b45ae4e7a92b84324792be934f6 241 PANTHER PTHR26402:SF553 1 224 1.7E-98 T 14-09-2016 AY555_RS09430 38669b45ae4e7a92b84324792be934f6 241 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 2.6E-19 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AY555_RS09430 38669b45ae4e7a92b84324792be934f6 241 SUPERFAMILY SSF52172 1 172 1.99E-39 T 14-09-2016 IPR011006 CheY-like superfamily AY555_RS09430 38669b45ae4e7a92b84324792be934f6 241 SMART SM00862 145 221 6.3E-18 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AY555_RS09430 38669b45ae4e7a92b84324792be934f6 241 Gene3D G3DSA:3.40.50.2300 1 123 7.3E-37 T 14-09-2016 AY555_RS09430 38669b45ae4e7a92b84324792be934f6 241 Pfam PF00072 Response regulator receiver domain 3 113 9.1E-27 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS09430 38669b45ae4e7a92b84324792be934f6 241 PANTHER PTHR26402 1 224 1.7E-98 T 14-09-2016 AY555_RS09430 38669b45ae4e7a92b84324792be934f6 241 SMART SM00448 1 112 3.0E-38 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS09430 38669b45ae4e7a92b84324792be934f6 241 Gene3D G3DSA:1.10.10.10 124 224 3.5E-26 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS00985 373c8b1af3d2c3f4424302bb94e9c159 156 SUPERFAMILY SSF47973 3 149 4.19E-62 T 14-09-2016 IPR023798 Ribosomal protein S7 domain AY555_RS00985 373c8b1af3d2c3f4424302bb94e9c159 156 PIRSF PIRSF002122 2 156 6.6E-61 T 14-09-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 AY555_RS00985 373c8b1af3d2c3f4424302bb94e9c159 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 1.1E-67 T 14-09-2016 IPR023798 Ribosomal protein S7 domain AY555_RS00985 373c8b1af3d2c3f4424302bb94e9c159 156 Gene3D G3DSA:1.10.455.10 7 156 1.2E-65 T 14-09-2016 IPR023798 Ribosomal protein S7 domain AY555_RS00985 373c8b1af3d2c3f4424302bb94e9c159 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 4.3E-68 T 14-09-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AY555_RS00985 373c8b1af3d2c3f4424302bb94e9c159 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 36.272 T 14-09-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AY555_RS00985 373c8b1af3d2c3f4424302bb94e9c159 156 PANTHER PTHR11205 1 156 5.8E-94 T 14-09-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 AY555_RS00985 373c8b1af3d2c3f4424302bb94e9c159 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 14-09-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 AY555_RS03255 05880a6b88d870daa3e2a3417465baa5 164 PANTHER PTHR30009 7 157 9.0E-24 T 14-09-2016 AY555_RS03255 05880a6b88d870daa3e2a3417465baa5 164 Pfam PF03918 Cytochrome C biogenesis protein 15 156 6.9E-47 T 14-09-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family AY555_RS04380 4130a698fe07595e2a2c96fa7ce19ce9 716 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 152 672 7.3E-174 T 14-09-2016 AY555_RS04380 4130a698fe07595e2a2c96fa7ce19ce9 716 Pfam PF00905 Penicillin binding protein transpeptidase domain 402 667 3.9E-29 T 14-09-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AY555_RS04380 4130a698fe07595e2a2c96fa7ce19ce9 716 Pfam PF00912 Transglycosylase 141 314 4.8E-62 T 14-09-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 AY555_RS04380 4130a698fe07595e2a2c96fa7ce19ce9 716 SUPERFAMILY SSF53955 130 332 9.56E-71 T 14-09-2016 IPR023346 Lysozyme-like domain AY555_RS04380 4130a698fe07595e2a2c96fa7ce19ce9 716 Gene3D G3DSA:3.40.710.10 317 696 1.1E-114 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AY555_RS04380 4130a698fe07595e2a2c96fa7ce19ce9 716 PANTHER PTHR32282 69 680 2.1E-195 T 14-09-2016 AY555_RS04380 4130a698fe07595e2a2c96fa7ce19ce9 716 PANTHER PTHR32282:SF5 69 680 2.1E-195 T 14-09-2016 AY555_RS04380 4130a698fe07595e2a2c96fa7ce19ce9 716 Gene3D G3DSA:1.10.3810.10 141 316 5.0E-71 T 14-09-2016 AY555_RS04380 4130a698fe07595e2a2c96fa7ce19ce9 716 SUPERFAMILY SSF56601 347 680 3.09E-109 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AY555_RS04380 4130a698fe07595e2a2c96fa7ce19ce9 716 SUPERFAMILY SSF56601 296 318 3.09E-109 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AY555_RS04520 acbe7284ae740e875024ffdb1fa24d45 238 Pfam PF08241 Methyltransferase domain 66 156 1.1E-13 T 14-09-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AY555_RS04520 acbe7284ae740e875024ffdb1fa24d45 238 SUPERFAMILY SSF53335 45 198 1.91E-30 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS04520 acbe7284ae740e875024ffdb1fa24d45 238 Gene3D G3DSA:3.40.50.150 48 199 4.3E-29 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS04520 acbe7284ae740e875024ffdb1fa24d45 238 PANTHER PTHR10108 43 193 6.9E-17 T 14-09-2016 AY555_RS05135 cdf7cea460441c08f637fc02a3d8609f 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 1.7E-53 T 14-09-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AY555_RS05135 cdf7cea460441c08f637fc02a3d8609f 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 1.7E-53 T 14-09-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AY555_RS05135 cdf7cea460441c08f637fc02a3d8609f 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 1.7E-53 T 14-09-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AY555_RS05135 cdf7cea460441c08f637fc02a3d8609f 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 1.7E-53 T 14-09-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AY555_RS05135 cdf7cea460441c08f637fc02a3d8609f 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 1.7E-53 T 14-09-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AY555_RS05135 cdf7cea460441c08f637fc02a3d8609f 636 Pfam PF02824 TGS domain 3 61 5.0E-12 T 14-09-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 AY555_RS05135 cdf7cea460441c08f637fc02a3d8609f 636 Gene3D G3DSA:3.10.20.30 1 64 2.4E-21 T 14-09-2016 IPR012675 Beta-grasp domain AY555_RS05135 cdf7cea460441c08f637fc02a3d8609f 636 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 323 528 3.0E-41 T 14-09-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS05135 cdf7cea460441c08f637fc02a3d8609f 636 Gene3D G3DSA:3.30.54.20 130 186 1.5E-22 T 14-09-2016 AY555_RS05135 cdf7cea460441c08f637fc02a3d8609f 636 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 628 5.7E-206 T 14-09-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AY555_RS05135 cdf7cea460441c08f637fc02a3d8609f 636 SUPERFAMILY SSF52954 530 630 1.15E-25 T 14-09-2016 IPR004154 Anticodon-binding AY555_RS05135 cdf7cea460441c08f637fc02a3d8609f 636 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 169 219 4.1E-15 T 14-09-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AY555_RS05135 cdf7cea460441c08f637fc02a3d8609f 636 Gene3D G3DSA:3.40.50.800 531 630 7.8E-27 T 14-09-2016 IPR004154 Anticodon-binding AY555_RS05135 cdf7cea460441c08f637fc02a3d8609f 636 SUPERFAMILY SSF81271 2 61 4.36E-16 T 14-09-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AY555_RS05135 cdf7cea460441c08f637fc02a3d8609f 636 Gene3D G3DSA:3.30.980.10 67 129 1.9E-40 T 14-09-2016 AY555_RS05135 cdf7cea460441c08f637fc02a3d8609f 636 Gene3D G3DSA:3.30.980.10 187 224 1.9E-40 T 14-09-2016 AY555_RS05135 cdf7cea460441c08f637fc02a3d8609f 636 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 32.934 T 14-09-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AY555_RS05135 cdf7cea460441c08f637fc02a3d8609f 636 SMART SM00863 169 219 3.7E-26 T 14-09-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AY555_RS05135 cdf7cea460441c08f637fc02a3d8609f 636 Gene3D G3DSA:3.30.930.10 242 530 2.6E-116 T 14-09-2016 AY555_RS05135 cdf7cea460441c08f637fc02a3d8609f 636 SUPERFAMILY SSF55186 64 241 1.31E-63 T 14-09-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 AY555_RS05135 cdf7cea460441c08f637fc02a3d8609f 636 PANTHER PTHR11451 1 628 0.0 T 14-09-2016 AY555_RS05135 cdf7cea460441c08f637fc02a3d8609f 636 PANTHER PTHR11451:SF31 1 628 0.0 T 14-09-2016 AY555_RS05135 cdf7cea460441c08f637fc02a3d8609f 636 Pfam PF03129 Anticodon binding domain 541 625 1.9E-14 T 14-09-2016 IPR004154 Anticodon-binding AY555_RS05135 cdf7cea460441c08f637fc02a3d8609f 636 SUPERFAMILY SSF55681 243 526 4.38E-97 T 14-09-2016 AY555_RS01910 20f4f215e3fd1a1f0b34ea838f346fda 242 SUPERFAMILY SSF51735 3 241 6.81E-79 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS01910 20f4f215e3fd1a1f0b34ea838f346fda 242 PANTHER PTHR24322:SF559 149 181 7.9E-61 T 14-09-2016 AY555_RS01910 20f4f215e3fd1a1f0b34ea838f346fda 242 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 14-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AY555_RS01910 20f4f215e3fd1a1f0b34ea838f346fda 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 6.1E-47 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS01910 20f4f215e3fd1a1f0b34ea838f346fda 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 6.1E-47 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS01910 20f4f215e3fd1a1f0b34ea838f346fda 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 223 6.1E-47 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS01910 20f4f215e3fd1a1f0b34ea838f346fda 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 6.1E-47 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS01910 20f4f215e3fd1a1f0b34ea838f346fda 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 6.1E-47 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS01910 20f4f215e3fd1a1f0b34ea838f346fda 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 6.1E-47 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS01910 20f4f215e3fd1a1f0b34ea838f346fda 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 6.1E-15 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS01910 20f4f215e3fd1a1f0b34ea838f346fda 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 6.1E-15 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS01910 20f4f215e3fd1a1f0b34ea838f346fda 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 6.1E-15 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS01910 20f4f215e3fd1a1f0b34ea838f346fda 242 Gene3D G3DSA:3.40.50.720 5 241 4.0E-80 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS01910 20f4f215e3fd1a1f0b34ea838f346fda 242 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 240 3.3E-61 T 14-09-2016 AY555_RS01910 20f4f215e3fd1a1f0b34ea838f346fda 242 PANTHER PTHR24322:SF559 9 133 7.9E-61 T 14-09-2016 AY555_RS01910 20f4f215e3fd1a1f0b34ea838f346fda 242 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 5 241 3.4E-103 T 14-09-2016 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|UniPathway: UPA00917 AY555_RS01910 20f4f215e3fd1a1f0b34ea838f346fda 242 PANTHER PTHR24322 149 181 7.9E-61 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS01910 20f4f215e3fd1a1f0b34ea838f346fda 242 PANTHER PTHR24322 9 133 7.9E-61 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS01910 20f4f215e3fd1a1f0b34ea838f346fda 242 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 180 5.8E-5 T 14-09-2016 AY555_RS04900 15896800666a32749405ecf85a96a94e 203 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 26 98 2.0E-13 T 14-09-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AY555_RS04900 15896800666a32749405ecf85a96a94e 203 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 5 187 25.861 T 14-09-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 AY555_RS04900 15896800666a32749405ecf85a96a94e 203 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 8 185 3.7E-37 T 14-09-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 AY555_RS04900 15896800666a32749405ecf85a96a94e 203 Pfam PF01386 Ribosomal L25p family 8 95 2.4E-22 T 14-09-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AY555_RS04900 15896800666a32749405ecf85a96a94e 203 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 103 188 2.8E-25 T 14-09-2016 IPR020057 Ribosomal protein L25, beta domain AY555_RS04900 15896800666a32749405ecf85a96a94e 203 Gene3D G3DSA:2.40.240.10 6 98 4.1E-29 T 14-09-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 AY555_RS04900 15896800666a32749405ecf85a96a94e 203 Gene3D G3DSA:2.170.120.20 101 192 9.1E-25 T 14-09-2016 IPR020057 Ribosomal protein L25, beta domain AY555_RS04900 15896800666a32749405ecf85a96a94e 203 PANTHER PTHR33284 6 200 5.9E-49 T 14-09-2016 AY555_RS04900 15896800666a32749405ecf85a96a94e 203 SUPERFAMILY SSF50715 5 192 6.8E-50 T 14-09-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 AY555_RS07295 d4105363e40a2ae2003f2458d8fbd61a 154 Gene3D G3DSA:3.90.1180.10 3 142 2.8E-60 T 14-09-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 AY555_RS07295 d4105363e40a2ae2003f2458d8fbd61a 154 PANTHER PTHR11545 1 143 4.3E-69 T 14-09-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AY555_RS07295 d4105363e40a2ae2003f2458d8fbd61a 154 SUPERFAMILY SSF52161 1 141 3.53E-56 T 14-09-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 AY555_RS07295 d4105363e40a2ae2003f2458d8fbd61a 154 PIRSF PIRSF002181 1 154 1.8E-50 T 14-09-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AY555_RS07295 d4105363e40a2ae2003f2458d8fbd61a 154 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 142 28.753 T 14-09-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AY555_RS07295 d4105363e40a2ae2003f2458d8fbd61a 154 Pfam PF00572 Ribosomal protein L13 14 139 1.5E-52 T 14-09-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AY555_RS07295 d4105363e40a2ae2003f2458d8fbd61a 154 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 142 3.3E-60 T 14-09-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 AY555_RS03380 e337bde7fb798bba1ccfae711f3ed17f 194 Pfam PF02630 SCO1/SenC 34 177 1.4E-46 T 14-09-2016 IPR003782 Copper chaperone SCO1/SenC AY555_RS03380 e337bde7fb798bba1ccfae711f3ed17f 194 Gene3D G3DSA:3.40.30.10 11 193 3.0E-63 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS03380 e337bde7fb798bba1ccfae711f3ed17f 194 PANTHER PTHR12151 33 194 5.4E-73 T 14-09-2016 IPR003782 Copper chaperone SCO1/SenC AY555_RS03380 e337bde7fb798bba1ccfae711f3ed17f 194 SUPERFAMILY SSF52833 32 194 1.45E-54 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS09815 789a8f207c4e34bfc05b15d0378e3053 246 SUPERFAMILY SSF53850 6 242 9.51E-66 T 14-09-2016 AY555_RS09815 789a8f207c4e34bfc05b15d0378e3053 246 Gene3D G3DSA:3.40.190.10 23 100 4.2E-40 T 14-09-2016 AY555_RS09815 789a8f207c4e34bfc05b15d0378e3053 246 Gene3D G3DSA:3.40.190.10 198 240 4.2E-40 T 14-09-2016 AY555_RS09815 789a8f207c4e34bfc05b15d0378e3053 246 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 48 61 - T 14-09-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AY555_RS09815 789a8f207c4e34bfc05b15d0378e3053 246 Gene3D G3DSA:3.40.190.10 101 190 6.8E-22 T 14-09-2016 AY555_RS09815 789a8f207c4e34bfc05b15d0378e3053 246 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 240 2.6E-58 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AY555_RS09815 789a8f207c4e34bfc05b15d0378e3053 246 SMART SM00079 26 241 1.6E-7 T 14-09-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AY555_RS09815 789a8f207c4e34bfc05b15d0378e3053 246 PANTHER PTHR18966 26 242 7.5E-47 T 14-09-2016 AY555_RS09815 789a8f207c4e34bfc05b15d0378e3053 246 SMART SM00062 26 242 8.3E-59 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AY555_RS09115 4571513689e32fa73f752cb971714e09 484 Pfam PF02637 GatB domain 337 482 3.2E-51 T 14-09-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 AY555_RS09115 4571513689e32fa73f752cb971714e09 484 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 11 483 36.799 T 14-09-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 AY555_RS09115 4571513689e32fa73f752cb971714e09 484 SUPERFAMILY SSF89095 305 410 2.01E-33 T 14-09-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 AY555_RS09115 4571513689e32fa73f752cb971714e09 484 SMART SM00845 336 482 6.2E-78 T 14-09-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 AY555_RS09115 4571513689e32fa73f752cb971714e09 484 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 11 482 8.7E-164 T 14-09-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 AY555_RS09115 4571513689e32fa73f752cb971714e09 484 PANTHER PTHR11659 11 482 1.8E-258 T 14-09-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 AY555_RS09115 4571513689e32fa73f752cb971714e09 484 PANTHER PTHR11659:SF0 11 482 1.8E-258 T 14-09-2016 AY555_RS09115 4571513689e32fa73f752cb971714e09 484 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 153 167 - T 14-09-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 AY555_RS09115 4571513689e32fa73f752cb971714e09 484 Pfam PF02934 GatB/GatE catalytic domain 14 297 2.8E-113 T 14-09-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 AY555_RS09115 4571513689e32fa73f752cb971714e09 484 SUPERFAMILY SSF55931 13 304 1.9E-114 T 14-09-2016 AY555_RS09585 5069a4057ba285526d2383477bd55541 171 SUPERFAMILY SSF53271 2 160 2.23E-51 T 14-09-2016 IPR029057 Phosphoribosyltransferase-like AY555_RS09585 5069a4057ba285526d2383477bd55541 171 PANTHER PTHR32315 3 171 6.9E-88 T 14-09-2016 AY555_RS09585 5069a4057ba285526d2383477bd55541 171 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 4 168 3.2E-61 T 14-09-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 AY555_RS09585 5069a4057ba285526d2383477bd55541 171 Pfam PF00156 Phosphoribosyl transferase domain 29 149 2.6E-20 T 14-09-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 AY555_RS09585 5069a4057ba285526d2383477bd55541 171 Gene3D G3DSA:3.40.50.2020 2 170 1.9E-67 T 14-09-2016 IPR029057 Phosphoribosyltransferase-like AY555_RS09585 5069a4057ba285526d2383477bd55541 171 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 3 169 35.065 T 14-09-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 AY555_RS02185 8c7e9ded94485937488ab1f4b1961e03 228 SUPERFAMILY SSF52172 23 143 3.13E-28 T 14-09-2016 IPR011006 CheY-like superfamily AY555_RS02185 8c7e9ded94485937488ab1f4b1961e03 228 SMART SM00421 162 219 7.3E-23 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AY555_RS02185 8c7e9ded94485937488ab1f4b1961e03 228 Pfam PF00196 Bacterial regulatory proteins, luxR family 164 217 6.9E-19 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AY555_RS02185 8c7e9ded94485937488ab1f4b1961e03 228 Pfam PF00072 Response regulator receiver domain 24 136 1.0E-21 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS02185 8c7e9ded94485937488ab1f4b1961e03 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 179 1.1E-12 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AY555_RS02185 8c7e9ded94485937488ab1f4b1961e03 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 195 207 1.1E-12 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AY555_RS02185 8c7e9ded94485937488ab1f4b1961e03 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 195 1.1E-12 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AY555_RS02185 8c7e9ded94485937488ab1f4b1961e03 228 Gene3D G3DSA:1.10.10.10 164 225 5.9E-24 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS02185 8c7e9ded94485937488ab1f4b1961e03 228 SMART SM00448 22 136 6.6E-28 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS02185 8c7e9ded94485937488ab1f4b1961e03 228 Gene3D G3DSA:3.40.50.2300 23 148 4.4E-32 T 14-09-2016 AY555_RS02185 8c7e9ded94485937488ab1f4b1961e03 228 SUPERFAMILY SSF46894 161 225 5.44E-21 T 14-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AY555_RS02185 8c7e9ded94485937488ab1f4b1961e03 228 PANTHER PTHR26402 22 216 9.4E-50 T 14-09-2016 AY555_RS09545 2a643d66b1605516434edd1085204f9e 255 PANTHER PTHR11609:SF2 3 239 7.8E-114 T 14-09-2016 AY555_RS09545 2a643d66b1605516434edd1085204f9e 255 Gene3D G3DSA:3.30.200.20 6 93 1.8E-36 T 14-09-2016 AY555_RS09545 2a643d66b1605516434edd1085204f9e 255 Pfam PF01259 SAICAR synthetase 6 236 3.2E-60 T 14-09-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 AY555_RS09545 2a643d66b1605516434edd1085204f9e 255 PANTHER PTHR11609 3 239 7.8E-114 T 14-09-2016 AY555_RS09545 2a643d66b1605516434edd1085204f9e 255 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 14-09-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 AY555_RS09545 2a643d66b1605516434edd1085204f9e 255 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 14-09-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 AY555_RS09545 2a643d66b1605516434edd1085204f9e 255 SUPERFAMILY SSF56104 5 237 1.47E-77 T 14-09-2016 AY555_RS09545 2a643d66b1605516434edd1085204f9e 255 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 4 238 1.3E-65 T 14-09-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 AY555_RS09545 2a643d66b1605516434edd1085204f9e 255 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 239 32.434 T 14-09-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 AY555_RS09545 2a643d66b1605516434edd1085204f9e 255 Gene3D G3DSA:3.30.470.20 94 224 2.7E-48 T 14-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AY555_RS04370 6f0ed31d93c8e33777e8436f9a9b9727 526 PANTHER PTHR32089:SF40 244 523 6.3E-105 T 14-09-2016 AY555_RS04370 6f0ed31d93c8e33777e8436f9a9b9727 526 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 340 519 1.4E-35 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AY555_RS04370 6f0ed31d93c8e33777e8436f9a9b9727 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 364 391 7.5E-19 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AY555_RS04370 6f0ed31d93c8e33777e8436f9a9b9727 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 12 37 7.5E-19 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AY555_RS04370 6f0ed31d93c8e33777e8436f9a9b9727 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 393 422 7.5E-19 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AY555_RS04370 6f0ed31d93c8e33777e8436f9a9b9727 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 441 470 7.5E-19 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AY555_RS04370 6f0ed31d93c8e33777e8436f9a9b9727 526 PANTHER PTHR32089 244 523 6.3E-105 T 14-09-2016 AY555_RS04370 6f0ed31d93c8e33777e8436f9a9b9727 526 Gene3D G3DSA:1.10.287.950 282 490 6.8E-44 T 14-09-2016 AY555_RS04370 6f0ed31d93c8e33777e8436f9a9b9727 526 PANTHER PTHR32089 136 212 6.3E-105 T 14-09-2016 AY555_RS04370 6f0ed31d93c8e33777e8436f9a9b9727 526 Pfam PF00672 HAMP domain 158 226 8.8E-11 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AY555_RS04370 6f0ed31d93c8e33777e8436f9a9b9727 526 SUPERFAMILY SSF58104 272 519 1.57E-58 T 14-09-2016 AY555_RS04370 6f0ed31d93c8e33777e8436f9a9b9727 526 SUPERFAMILY SSF58104 206 232 1.57E-58 T 14-09-2016 AY555_RS04370 6f0ed31d93c8e33777e8436f9a9b9727 526 PANTHER PTHR32089:SF40 136 212 6.3E-105 T 14-09-2016 AY555_RS04370 6f0ed31d93c8e33777e8436f9a9b9727 526 SMART SM00283 266 520 9.0E-43 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AY555_RS04370 6f0ed31d93c8e33777e8436f9a9b9727 526 SMART SM00304 177 230 5.3E-8 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AY555_RS05150 32f238c1249e6e425c887c0c0f48824a 248 SUPERFAMILY SSF48452 91 230 1.26E-18 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS05150 32f238c1249e6e425c887c0c0f48824a 248 SMART SM00028 194 227 170.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AY555_RS05150 32f238c1249e6e425c887c0c0f48824a 248 SMART SM00028 54 87 86.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AY555_RS05150 32f238c1249e6e425c887c0c0f48824a 248 SMART SM00028 126 159 58.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AY555_RS05150 32f238c1249e6e425c887c0c0f48824a 248 SMART SM00028 160 193 2.1 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AY555_RS05150 32f238c1249e6e425c887c0c0f48824a 248 PANTHER PTHR23083 54 237 4.2E-14 T 14-09-2016 AY555_RS05150 32f238c1249e6e425c887c0c0f48824a 248 Gene3D G3DSA:1.25.40.10 91 231 1.9E-19 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS01490 cfe822d488d38a6bf5ec8bb4e32fff76 234 SUPERFAMILY SSF46894 138 233 9.92E-22 T 14-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AY555_RS01490 cfe822d488d38a6bf5ec8bb4e32fff76 234 SUPERFAMILY SSF52172 7 130 4.41E-42 T 14-09-2016 IPR011006 CheY-like superfamily AY555_RS01490 cfe822d488d38a6bf5ec8bb4e32fff76 234 Gene3D G3DSA:3.40.50.2300 8 129 4.0E-41 T 14-09-2016 AY555_RS01490 cfe822d488d38a6bf5ec8bb4e32fff76 234 SMART SM00448 9 119 8.3E-42 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS01490 cfe822d488d38a6bf5ec8bb4e32fff76 234 Pfam PF00072 Response regulator receiver domain 11 119 2.4E-30 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS01490 cfe822d488d38a6bf5ec8bb4e32fff76 234 PANTHER PTHR26402 9 234 3.0E-82 T 14-09-2016 AY555_RS01490 cfe822d488d38a6bf5ec8bb4e32fff76 234 SMART SM00862 158 231 8.6E-20 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AY555_RS01490 cfe822d488d38a6bf5ec8bb4e32fff76 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 231 4.5E-18 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AY555_RS01490 cfe822d488d38a6bf5ec8bb4e32fff76 234 Gene3D G3DSA:1.10.10.10 138 233 5.3E-24 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS01490 cfe822d488d38a6bf5ec8bb4e32fff76 234 PANTHER PTHR26402:SF292 9 234 3.0E-82 T 14-09-2016 AY555_RS06700 8e77db4336ae9620fc8e5b427aee6cbf 390 SUPERFAMILY SSF53098 5 208 4.83E-65 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AY555_RS06700 8e77db4336ae9620fc8e5b427aee6cbf 390 TIGRFAM TIGR01388 rnd: ribonuclease D 7 368 3.9E-125 T 14-09-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 AY555_RS06700 8e77db4336ae9620fc8e5b427aee6cbf 390 Pfam PF01612 3'-5' exonuclease 8 174 1.3E-35 T 14-09-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AY555_RS06700 8e77db4336ae9620fc8e5b427aee6cbf 390 PANTHER PTHR12124 6 315 8.8E-58 T 14-09-2016 AY555_RS06700 8e77db4336ae9620fc8e5b427aee6cbf 390 SUPERFAMILY SSF47819 301 371 3.27E-12 T 14-09-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 AY555_RS06700 8e77db4336ae9620fc8e5b427aee6cbf 390 Hamap MF_01899 Ribonuclease D [rnd]. 5 369 45.984 T 14-09-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 AY555_RS06700 8e77db4336ae9620fc8e5b427aee6cbf 390 Pfam PF00570 HRDC domain 216 283 2.9E-16 T 14-09-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 AY555_RS06700 8e77db4336ae9620fc8e5b427aee6cbf 390 SMART SM00341 212 293 1.5E-7 T 14-09-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 AY555_RS06700 8e77db4336ae9620fc8e5b427aee6cbf 390 Gene3D G3DSA:3.30.420.10 7 182 1.7E-14 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AY555_RS06700 8e77db4336ae9620fc8e5b427aee6cbf 390 SMART SM00474 5 174 8.9E-29 T 14-09-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AY555_RS06700 8e77db4336ae9620fc8e5b427aee6cbf 390 SUPERFAMILY SSF47819 195 300 9.16E-25 T 14-09-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 AY555_RS06865 d664fcc5bea91a2060caf99576374121 286 Gene3D G3DSA:3.40.50.150 91 279 6.1E-59 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS06865 d664fcc5bea91a2060caf99576374121 286 Pfam PF13847 Methyltransferase domain 117 245 7.4E-10 T 14-09-2016 IPR025714 Methyltransferase domain AY555_RS06865 d664fcc5bea91a2060caf99576374121 286 Gene3D G3DSA:1.10.8.10 6 87 1.5E-22 T 14-09-2016 AY555_RS06865 d664fcc5bea91a2060caf99576374121 286 SUPERFAMILY SSF53335 6 279 1.15E-51 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS06865 d664fcc5bea91a2060caf99576374121 286 PANTHER PTHR18895:SF64 7 277 8.4E-76 T 14-09-2016 AY555_RS06865 d664fcc5bea91a2060caf99576374121 286 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 5 283 39.52 T 14-09-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AY555_RS06865 d664fcc5bea91a2060caf99576374121 286 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 186 192 - T 14-09-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AY555_RS06865 d664fcc5bea91a2060caf99576374121 286 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 264 1.0E-49 T 14-09-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AY555_RS06865 d664fcc5bea91a2060caf99576374121 286 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 119 133 9.2E-6 T 14-09-2016 AY555_RS06865 d664fcc5bea91a2060caf99576374121 286 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 183 195 9.2E-6 T 14-09-2016 AY555_RS06865 d664fcc5bea91a2060caf99576374121 286 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 223 247 9.2E-6 T 14-09-2016 AY555_RS06865 d664fcc5bea91a2060caf99576374121 286 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 27 279 6.2E-74 T 14-09-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AY555_RS06865 d664fcc5bea91a2060caf99576374121 286 PANTHER PTHR18895 7 277 8.4E-76 T 14-09-2016 AY555_RS02875 c25343621e52386a37069a4e1fbc8cbe 147 Gene3D G3DSA:1.10.260.40 29 72 2.8E-5 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AY555_RS02875 c25343621e52386a37069a4e1fbc8cbe 147 SUPERFAMILY SSF47413 28 73 5.04E-5 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AY555_RS01005 d6de51047cc54429e0a72795abc42589 125 Gene3D G3DSA:3.30.1390.10 52 125 2.3E-33 T 14-09-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AY555_RS01005 d6de51047cc54429e0a72795abc42589 125 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 59 125 8.0E-20 T 14-09-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 AY555_RS01005 d6de51047cc54429e0a72795abc42589 125 SUPERFAMILY SSF54736 53 125 1.46E-24 T 14-09-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AY555_RS01005 d6de51047cc54429e0a72795abc42589 125 Gene3D G3DSA:1.20.5.710 6 51 2.3E-17 T 14-09-2016 AY555_RS01005 d6de51047cc54429e0a72795abc42589 125 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 1 125 24.815 T 14-09-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS01005 d6de51047cc54429e0a72795abc42589 125 PANTHER PTHR24089 5 122 1.4E-17 T 14-09-2016 AY555_RS01005 d6de51047cc54429e0a72795abc42589 125 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 51 8.8E-19 T 14-09-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS01005 d6de51047cc54429e0a72795abc42589 125 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 125 1.4E-46 T 14-09-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS01005 d6de51047cc54429e0a72795abc42589 125 SUPERFAMILY SSF48300 4 60 8.63E-17 T 14-09-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS01005 d6de51047cc54429e0a72795abc42589 125 PANTHER PTHR24089:SF272 5 122 1.4E-17 T 14-09-2016 AY555_RS01005 d6de51047cc54429e0a72795abc42589 125 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 58 125 2.5E-30 T 14-09-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 AY555_RS07425 5783f30275f9b3178ee0936365daeb99 271 PRINTS PR01959 SuhB family inositol monophosphatase signature 201 213 2.4E-24 T 14-09-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AY555_RS07425 5783f30275f9b3178ee0936365daeb99 271 PRINTS PR01959 SuhB family inositol monophosphatase signature 159 185 2.4E-24 T 14-09-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AY555_RS07425 5783f30275f9b3178ee0936365daeb99 271 PRINTS PR01959 SuhB family inositol monophosphatase signature 20 42 2.4E-24 T 14-09-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AY555_RS07425 5783f30275f9b3178ee0936365daeb99 271 PRINTS PR01959 SuhB family inositol monophosphatase signature 107 126 2.4E-24 T 14-09-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AY555_RS07425 5783f30275f9b3178ee0936365daeb99 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 84 100 6.6E-53 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AY555_RS07425 5783f30275f9b3178ee0936365daeb99 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 63 79 6.6E-53 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AY555_RS07425 5783f30275f9b3178ee0936365daeb99 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 133 156 6.6E-53 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AY555_RS07425 5783f30275f9b3178ee0936365daeb99 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 41 61 6.6E-53 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AY555_RS07425 5783f30275f9b3178ee0936365daeb99 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 180 201 6.6E-53 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AY555_RS07425 5783f30275f9b3178ee0936365daeb99 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 211 235 6.6E-53 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AY555_RS07425 5783f30275f9b3178ee0936365daeb99 271 PANTHER PTHR20854 7 263 5.9E-85 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AY555_RS07425 5783f30275f9b3178ee0936365daeb99 271 Gene3D G3DSA:3.40.190.80 154 262 2.7E-35 T 14-09-2016 AY555_RS07425 5783f30275f9b3178ee0936365daeb99 271 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 84 97 - T 14-09-2016 IPR020583 Inositol monophosphatase, metal-binding site AY555_RS07425 5783f30275f9b3178ee0936365daeb99 271 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 214 228 - T 14-09-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 AY555_RS07425 5783f30275f9b3178ee0936365daeb99 271 Pfam PF00459 Inositol monophosphatase family 5 259 1.1E-60 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AY555_RS07425 5783f30275f9b3178ee0936365daeb99 271 PANTHER PTHR20854:SF4 7 263 5.9E-85 T 14-09-2016 AY555_RS07425 5783f30275f9b3178ee0936365daeb99 271 Gene3D G3DSA:3.30.540.10 7 153 1.3E-49 T 14-09-2016 AY555_RS07425 5783f30275f9b3178ee0936365daeb99 271 SUPERFAMILY SSF56655 6 262 1.02E-82 T 14-09-2016 AY555_RS04080 5d5309377dff4b1248f33dc4eb31edd6 150 Gene3D G3DSA:1.10.10.10 5 135 6.2E-25 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS04080 5d5309377dff4b1248f33dc4eb31edd6 150 SUPERFAMILY SSF46785 5 130 1.04E-25 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS04080 5d5309377dff4b1248f33dc4eb31edd6 150 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 6 129 2.2E-27 T 14-09-2016 IPR000944 Transcription regulator Rrf2-type AY555_RS04080 5d5309377dff4b1248f33dc4eb31edd6 150 PANTHER PTHR33221:SF1 3 136 1.1E-32 T 14-09-2016 AY555_RS04080 5d5309377dff4b1248f33dc4eb31edd6 150 PANTHER PTHR33221 3 136 1.1E-32 T 14-09-2016 AY555_RS04080 5d5309377dff4b1248f33dc4eb31edd6 150 Pfam PF02082 Transcriptional regulator 5 84 1.1E-20 T 14-09-2016 IPR000944 Transcription regulator Rrf2-type AY555_RS09465 2811a577fa8c5544f8038fda3ced3ffc 260 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 29 133 1.9E-31 T 14-09-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 AY555_RS09465 2811a577fa8c5544f8038fda3ced3ffc 260 PANTHER PTHR11921:SF27 1 258 7.0E-169 T 14-09-2016 AY555_RS09465 2811a577fa8c5544f8038fda3ced3ffc 260 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 171 182 - T 14-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AY555_RS09465 2811a577fa8c5544f8038fda3ced3ffc 260 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 80 88 - T 14-09-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AY555_RS09465 2811a577fa8c5544f8038fda3ced3ffc 260 SUPERFAMILY SSF54292 27 128 6.47E-32 T 14-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AY555_RS09465 2811a577fa8c5544f8038fda3ced3ffc 260 SUPERFAMILY SSF46548 130 258 6.1E-39 T 14-09-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 AY555_RS09465 2811a577fa8c5544f8038fda3ced3ffc 260 Pfam PF13534 4Fe-4S dicluster domain 170 243 5.2E-9 T 14-09-2016 AY555_RS09465 2811a577fa8c5544f8038fda3ced3ffc 260 Gene3D G3DSA:1.10.1060.10 130 258 5.6E-49 T 14-09-2016 AY555_RS09465 2811a577fa8c5544f8038fda3ced3ffc 260 Gene3D G3DSA:3.10.20.30 22 128 7.9E-42 T 14-09-2016 IPR012675 Beta-grasp domain AY555_RS09465 2811a577fa8c5544f8038fda3ced3ffc 260 PANTHER PTHR11921 1 258 7.0E-169 T 14-09-2016 AY555_RS09465 2811a577fa8c5544f8038fda3ced3ffc 260 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 32 252 2.7E-80 T 14-09-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 AY555_RS09565 4089904c363a2443e7c84dc407940e01 77 PIRSF PIRSF003113 1 77 1.2E-21 T 14-09-2016 IPR002634 BolA protein AY555_RS09565 4089904c363a2443e7c84dc407940e01 77 Pfam PF01722 BolA-like protein 27 77 1.0E-15 T 14-09-2016 IPR002634 BolA protein AY555_RS09565 4089904c363a2443e7c84dc407940e01 77 PANTHER PTHR12735 1 77 2.0E-17 T 14-09-2016 AY555_RS09565 4089904c363a2443e7c84dc407940e01 77 Gene3D G3DSA:3.30.300.90 1 77 2.5E-23 T 14-09-2016 IPR002634 BolA protein AY555_RS09565 4089904c363a2443e7c84dc407940e01 77 SUPERFAMILY SSF82657 1 77 5.1E-25 T 14-09-2016 IPR002634 BolA protein AY555_RS06220 8616ca63474755db9c535b87a85dc224 180 Pfam PF14557 Putative AphA-like transcriptional regulator 2 174 1.8E-70 T 14-09-2016 IPR029434 Putative transcriptional regulator AY555_RS06220 8616ca63474755db9c535b87a85dc224 180 Gene3D G3DSA:1.20.1280.20 101 176 2.1E-28 T 14-09-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 AY555_RS06220 8616ca63474755db9c535b87a85dc224 180 SUPERFAMILY SSF46785 13 177 7.37E-15 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS06220 8616ca63474755db9c535b87a85dc224 180 Gene3D G3DSA:1.10.10.10 1 100 4.8E-43 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS08110 086cec63b8c27e82d1f6dbc2ba86d477 163 Pfam PF02464 Competence-damaged protein 10 160 1.1E-52 T 14-09-2016 IPR008136 CinA, C-terminal AY555_RS08110 086cec63b8c27e82d1f6dbc2ba86d477 163 SUPERFAMILY SSF142433 6 161 2.22E-50 T 14-09-2016 IPR008136 CinA, C-terminal AY555_RS08110 086cec63b8c27e82d1f6dbc2ba86d477 163 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 16 159 3.1E-41 T 14-09-2016 IPR008136 CinA, C-terminal AY555_RS08110 086cec63b8c27e82d1f6dbc2ba86d477 163 PANTHER PTHR13939 1 158 6.1E-55 T 14-09-2016 AY555_RS08110 086cec63b8c27e82d1f6dbc2ba86d477 163 Gene3D G3DSA:3.90.950.20 5 162 1.0E-53 T 14-09-2016 IPR008136 CinA, C-terminal AY555_RS09890 f16ae72101cdd9c28d1783cf67582af3 781 Gene3D G3DSA:3.20.20.210 402 765 8.9E-125 T 14-09-2016 AY555_RS09890 f16ae72101cdd9c28d1783cf67582af3 781 SUPERFAMILY SSF51726 2 402 3.14E-102 T 14-09-2016 AY555_RS09890 f16ae72101cdd9c28d1783cf67582af3 781 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 1 767 34.981 T 14-09-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 AY555_RS09890 f16ae72101cdd9c28d1783cf67582af3 781 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 440 762 4.8E-144 T 14-09-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 AY555_RS09890 f16ae72101cdd9c28d1783cf67582af3 781 Gene3D G3DSA:3.20.20.210 2 398 8.9E-134 T 14-09-2016 AY555_RS09890 f16ae72101cdd9c28d1783cf67582af3 781 PANTHER PTHR30519:SF0 2 95 0.0 T 14-09-2016 AY555_RS09890 f16ae72101cdd9c28d1783cf67582af3 781 PANTHER PTHR30519:SF0 114 772 0.0 T 14-09-2016 AY555_RS09890 f16ae72101cdd9c28d1783cf67582af3 781 SUPERFAMILY SSF51726 405 765 3.53E-114 T 14-09-2016 AY555_RS09890 f16ae72101cdd9c28d1783cf67582af3 781 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 1 765 0.0 T 14-09-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 AY555_RS09890 f16ae72101cdd9c28d1783cf67582af3 781 PIRSF PIRSF000382 1 772 0.0 T 14-09-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 AY555_RS09890 f16ae72101cdd9c28d1783cf67582af3 781 PANTHER PTHR30519 2 95 0.0 T 14-09-2016 AY555_RS09890 f16ae72101cdd9c28d1783cf67582af3 781 PANTHER PTHR30519 114 772 0.0 T 14-09-2016 AY555_RS09890 f16ae72101cdd9c28d1783cf67582af3 781 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 2 322 5.0E-107 T 14-09-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 AY555_RS08735 85b8687ae5509c2c26afd5ef1a1025d5 689 SUPERFAMILY SSF53706 214 625 3.75E-100 T 14-09-2016 AY555_RS08735 85b8687ae5509c2c26afd5ef1a1025d5 689 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 146 156 - T 14-09-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 AY555_RS08735 85b8687ae5509c2c26afd5ef1a1025d5 689 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 597 3.1E-223 T 14-09-2016 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 AY555_RS08735 85b8687ae5509c2c26afd5ef1a1025d5 689 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 99 111 - T 14-09-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 AY555_RS08735 85b8687ae5509c2c26afd5ef1a1025d5 689 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 84 123 2.5E-17 T 14-09-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 AY555_RS08735 85b8687ae5509c2c26afd5ef1a1025d5 689 Pfam PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal 639 672 3.1E-15 T 14-09-2016 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal GO:0016651|GO:0051536|GO:0055114 AY555_RS08735 85b8687ae5509c2c26afd5ef1a1025d5 689 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 77 2.5E-19 T 14-09-2016 AY555_RS08735 85b8687ae5509c2c26afd5ef1a1025d5 689 Gene3D G3DSA:3.40.50.740 272 407 7.0E-46 T 14-09-2016 AY555_RS08735 85b8687ae5509c2c26afd5ef1a1025d5 689 Gene3D G3DSA:3.40.50.740 495 623 7.0E-46 T 14-09-2016 AY555_RS08735 85b8687ae5509c2c26afd5ef1a1025d5 689 Pfam PF00384 Molybdopterin oxidoreductase 272 599 1.9E-74 T 14-09-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 AY555_RS08735 85b8687ae5509c2c26afd5ef1a1025d5 689 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 14-09-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 AY555_RS08735 85b8687ae5509c2c26afd5ef1a1025d5 689 SUPERFAMILY SSF54862 76 212 1.84E-39 T 14-09-2016 AY555_RS08735 85b8687ae5509c2c26afd5ef1a1025d5 689 PANTHER PTHR11615 352 685 2.4E-304 T 14-09-2016 AY555_RS08735 85b8687ae5509c2c26afd5ef1a1025d5 689 PANTHER PTHR11615 3 298 2.4E-304 T 14-09-2016 AY555_RS08735 85b8687ae5509c2c26afd5ef1a1025d5 689 SUPERFAMILY SSF54292 1 75 6.56E-23 T 14-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AY555_RS08735 85b8687ae5509c2c26afd5ef1a1025d5 689 Gene3D G3DSA:3.10.20.30 5 56 2.4E-8 T 14-09-2016 IPR012675 Beta-grasp domain AY555_RS08735 85b8687ae5509c2c26afd5ef1a1025d5 689 PANTHER PTHR11615:SF115 352 685 2.4E-304 T 14-09-2016 AY555_RS08735 85b8687ae5509c2c26afd5ef1a1025d5 689 PANTHER PTHR11615:SF115 3 298 2.4E-304 T 14-09-2016 AY555_RS08735 85b8687ae5509c2c26afd5ef1a1025d5 689 SMART SM00929 84 124 1.5E-21 T 14-09-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 AY555_RS02545 acb7b4455c322570fe32ffa1c08f3d04 357 Gene3D G3DSA:3.30.420.40 1 162 1.8E-44 T 14-09-2016 AY555_RS02545 acb7b4455c322570fe32ffa1c08f3d04 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 5.9E-45 T 14-09-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AY555_RS02545 acb7b4455c322570fe32ffa1c08f3d04 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 101 120 5.9E-45 T 14-09-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AY555_RS02545 acb7b4455c322570fe32ffa1c08f3d04 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 157 178 5.9E-45 T 14-09-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AY555_RS02545 acb7b4455c322570fe32ffa1c08f3d04 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 134 146 5.9E-45 T 14-09-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AY555_RS02545 acb7b4455c322570fe32ffa1c08f3d04 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 274 283 5.9E-45 T 14-09-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AY555_RS02545 acb7b4455c322570fe32ffa1c08f3d04 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 80 100 5.9E-45 T 14-09-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AY555_RS02545 acb7b4455c322570fe32ffa1c08f3d04 357 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 317 1.6E-96 T 14-09-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AY555_RS02545 acb7b4455c322570fe32ffa1c08f3d04 357 ProSitePatterns PS01016 Glycoprotease family signature. 100 120 - T 14-09-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AY555_RS02545 acb7b4455c322570fe32ffa1c08f3d04 357 Pfam PF00814 Glycoprotease family 28 318 8.6E-97 T 14-09-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AY555_RS02545 acb7b4455c322570fe32ffa1c08f3d04 357 SUPERFAMILY SSF53067 105 320 1.17E-41 T 14-09-2016 AY555_RS02545 acb7b4455c322570fe32ffa1c08f3d04 357 PANTHER PTHR11735 1 343 1.4E-151 T 14-09-2016 AY555_RS02545 acb7b4455c322570fe32ffa1c08f3d04 357 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 324 5.5E-124 T 14-09-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AY555_RS02545 acb7b4455c322570fe32ffa1c08f3d04 357 PANTHER PTHR11735:SF6 1 343 1.4E-151 T 14-09-2016 AY555_RS02545 acb7b4455c322570fe32ffa1c08f3d04 357 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 342 64.246 T 14-09-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AY555_RS02545 acb7b4455c322570fe32ffa1c08f3d04 357 SUPERFAMILY SSF53067 3 127 2.75E-30 T 14-09-2016 AY555_RS00895 c0a8d170fd615ecda10d7c4bddaf2a95 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 14-09-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 AY555_RS00895 c0a8d170fd615ecda10d7c4bddaf2a95 132 SUPERFAMILY SSF56047 2 132 6.28E-43 T 14-09-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 AY555_RS00895 c0a8d170fd615ecda10d7c4bddaf2a95 132 Gene3D G3DSA:3.30.1490.10 76 132 3.4E-26 T 14-09-2016 AY555_RS00895 c0a8d170fd615ecda10d7c4bddaf2a95 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 29.477 T 14-09-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 AY555_RS00895 c0a8d170fd615ecda10d7c4bddaf2a95 132 Pfam PF00410 Ribosomal protein S8 5 132 5.6E-43 T 14-09-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 AY555_RS00895 c0a8d170fd615ecda10d7c4bddaf2a95 132 PANTHER PTHR11758 1 132 7.0E-47 T 14-09-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 AY555_RS00895 c0a8d170fd615ecda10d7c4bddaf2a95 132 Gene3D G3DSA:3.30.1370.30 2 73 9.9E-21 T 14-09-2016 AY555_RS03660 c93b28533e8f03fab0dfd228532b307f 424 Gene3D G3DSA:2.40.160.10 35 149 7.6E-36 T 14-09-2016 IPR023614 Porin domain AY555_RS03660 c93b28533e8f03fab0dfd228532b307f 424 Gene3D G3DSA:2.40.160.10 190 424 7.6E-36 T 14-09-2016 IPR023614 Porin domain AY555_RS03660 c93b28533e8f03fab0dfd228532b307f 424 SUPERFAMILY SSF56935 179 424 4.88E-30 T 14-09-2016 AY555_RS03660 c93b28533e8f03fab0dfd228532b307f 424 SUPERFAMILY SSF56935 29 130 4.88E-30 T 14-09-2016 AY555_RS03660 c93b28533e8f03fab0dfd228532b307f 424 Pfam PF13609 Gram-negative porin 10 401 4.1E-43 T 14-09-2016 AY555_RS03170 6663b4d367ebbf1801093b5dd4e55175 266 PIRSF PIRSF001430 1 263 2.1E-72 T 14-09-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AY555_RS03170 6663b4d367ebbf1801093b5dd4e55175 266 Pfam PF01416 tRNA pseudouridine synthase 9 105 1.9E-7 T 14-09-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AY555_RS03170 6663b4d367ebbf1801093b5dd4e55175 266 Pfam PF01416 tRNA pseudouridine synthase 146 250 2.2E-31 T 14-09-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AY555_RS03170 6663b4d367ebbf1801093b5dd4e55175 266 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 249 33.4 T 14-09-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AY555_RS03170 6663b4d367ebbf1801093b5dd4e55175 266 Gene3D G3DSA:3.30.70.660 108 247 2.5E-46 T 14-09-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 AY555_RS03170 6663b4d367ebbf1801093b5dd4e55175 266 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 5 243 2.1E-53 T 14-09-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AY555_RS03170 6663b4d367ebbf1801093b5dd4e55175 266 PANTHER PTHR11142 1 259 3.8E-85 T 14-09-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AY555_RS03170 6663b4d367ebbf1801093b5dd4e55175 266 Gene3D G3DSA:3.30.70.580 1 106 7.3E-32 T 14-09-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 AY555_RS03170 6663b4d367ebbf1801093b5dd4e55175 266 PANTHER PTHR11142:SF0 1 259 3.8E-85 T 14-09-2016 AY555_RS03170 6663b4d367ebbf1801093b5dd4e55175 266 SUPERFAMILY SSF55120 1 253 5.32E-80 T 14-09-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AY555_RS09650 63f848f94d6457c35602d8164f8205e8 783 SUPERFAMILY SSF53098 321 469 1.21E-49 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AY555_RS09650 63f848f94d6457c35602d8164f8205e8 783 Gene3D G3DSA:1.10.150.310 499 630 7.6E-43 T 14-09-2016 IPR023097 Tex RuvX-like domain AY555_RS09650 63f848f94d6457c35602d8164f8205e8 783 Gene3D G3DSA:1.10.3500.10 109 321 6.1E-96 T 14-09-2016 IPR023323 Tex-like domain AY555_RS09650 63f848f94d6457c35602d8164f8205e8 783 Gene3D G3DSA:1.10.3500.10 451 498 6.1E-96 T 14-09-2016 IPR023323 Tex-like domain AY555_RS09650 63f848f94d6457c35602d8164f8205e8 783 Pfam PF12836 Helix-hairpin-helix motif 491 555 1.2E-28 T 14-09-2016 AY555_RS09650 63f848f94d6457c35602d8164f8205e8 783 SMART SM00732 325 424 1.6E-32 T 14-09-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 AY555_RS09650 63f848f94d6457c35602d8164f8205e8 783 PANTHER PTHR10724:SF1 1 754 0.0 T 14-09-2016 AY555_RS09650 63f848f94d6457c35602d8164f8205e8 783 Gene3D G3DSA:3.30.420.140 325 450 7.7E-51 T 14-09-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 AY555_RS09650 63f848f94d6457c35602d8164f8205e8 783 SUPERFAMILY SSF158832 2 320 6.93E-113 T 14-09-2016 AY555_RS09650 63f848f94d6457c35602d8164f8205e8 783 Pfam PF16921 Tex protein YqgF-like domain 326 451 2.1E-51 T 14-09-2016 IPR032639 Tex protein, YqgF-like domain AY555_RS09650 63f848f94d6457c35602d8164f8205e8 783 Gene3D G3DSA:2.40.50.140 640 720 4.3E-29 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS09650 63f848f94d6457c35602d8164f8205e8 783 SUPERFAMILY SSF47781 560 632 1.62E-17 T 14-09-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 AY555_RS09650 63f848f94d6457c35602d8164f8205e8 783 Pfam PF00575 S1 RNA binding domain 649 720 7.2E-22 T 14-09-2016 IPR003029 S1 domain GO:0003676 AY555_RS09650 63f848f94d6457c35602d8164f8205e8 783 Pfam PF09371 Tex-like protein N-terminal domain 8 191 9.4E-67 T 14-09-2016 IPR018974 Tex-like protein, N-terminal AY555_RS09650 63f848f94d6457c35602d8164f8205e8 783 SMART SM00316 649 720 7.0E-28 T 14-09-2016 IPR022967 RNA-binding domain, S1 AY555_RS09650 63f848f94d6457c35602d8164f8205e8 783 Gene3D G3DSA:1.10.10.650 2 108 8.0E-43 T 14-09-2016 IPR023319 Tex-like protein, HTH domain AY555_RS09650 63f848f94d6457c35602d8164f8205e8 783 SUPERFAMILY SSF47781 470 556 4.11E-27 T 14-09-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 AY555_RS09650 63f848f94d6457c35602d8164f8205e8 783 SUPERFAMILY SSF50249 638 723 1.12E-25 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS09650 63f848f94d6457c35602d8164f8205e8 783 PANTHER PTHR10724 1 754 0.0 T 14-09-2016 AY555_RS03700 578d61800bf3570779176eba6554fc88 198 Gene3D G3DSA:3.90.950.10 5 195 2.3E-75 T 14-09-2016 IPR029001 Inosine triphosphate pyrophosphatase-like AY555_RS03700 578d61800bf3570779176eba6554fc88 198 SUPERFAMILY SSF52972 8 196 1.1E-65 T 14-09-2016 IPR029001 Inosine triphosphate pyrophosphatase-like AY555_RS03700 578d61800bf3570779176eba6554fc88 198 Pfam PF01725 Ham1 family 10 194 1.2E-51 T 14-09-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 AY555_RS03700 578d61800bf3570779176eba6554fc88 198 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 10 195 2.3E-50 T 14-09-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 AY555_RS03700 578d61800bf3570779176eba6554fc88 198 PANTHER PTHR11067 3 194 2.5E-70 T 14-09-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 AY555_RS03700 578d61800bf3570779176eba6554fc88 198 PANTHER PTHR11067:SF9 3 194 2.5E-70 T 14-09-2016 AY555_RS03700 578d61800bf3570779176eba6554fc88 198 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 8 198 46.1 T 14-09-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 AY555_RS05390 8e116bddeef8f4496cc17d2e7778b43b 610 PANTHER PTHR33121:SF10 137 276 6.6E-18 T 14-09-2016 AY555_RS05390 8e116bddeef8f4496cc17d2e7778b43b 610 SUPERFAMILY SSF55073 413 516 1.8E-18 T 14-09-2016 IPR029787 Nucleotide cyclase AY555_RS05390 8e116bddeef8f4496cc17d2e7778b43b 610 SUPERFAMILY SSF141868 16 238 3.92E-33 T 14-09-2016 IPR001633 EAL domain AY555_RS05390 8e116bddeef8f4496cc17d2e7778b43b 610 SMART SM00267 395 564 9.7E-7 T 14-09-2016 IPR000160 GGDEF domain AY555_RS05390 8e116bddeef8f4496cc17d2e7778b43b 610 Gene3D G3DSA:3.10.580.10 279 401 6.6E-7 T 14-09-2016 AY555_RS05390 8e116bddeef8f4496cc17d2e7778b43b 610 Gene3D G3DSA:3.30.70.270 411 580 2.8E-19 T 14-09-2016 AY555_RS05390 8e116bddeef8f4496cc17d2e7778b43b 610 SUPERFAMILY SSF54631 279 404 1.77E-7 T 14-09-2016 AY555_RS05390 8e116bddeef8f4496cc17d2e7778b43b 610 Pfam PF00990 Diguanylate cyclase, GGDEF domain 412 513 1.0E-12 T 14-09-2016 IPR000160 GGDEF domain AY555_RS05390 8e116bddeef8f4496cc17d2e7778b43b 610 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 411 508 9.1E-14 T 14-09-2016 IPR000160 GGDEF domain AY555_RS05390 8e116bddeef8f4496cc17d2e7778b43b 610 Pfam PF00571 CBS domain 279 324 0.0014 T 14-09-2016 IPR000644 CBS domain AY555_RS05390 8e116bddeef8f4496cc17d2e7778b43b 610 Pfam PF00563 EAL domain 15 238 6.2E-28 T 14-09-2016 IPR001633 EAL domain AY555_RS05390 8e116bddeef8f4496cc17d2e7778b43b 610 PANTHER PTHR33121 137 276 6.6E-18 T 14-09-2016 AY555_RS05390 8e116bddeef8f4496cc17d2e7778b43b 610 Gene3D G3DSA:3.20.20.450 16 238 1.3E-30 T 14-09-2016 IPR001633 EAL domain AY555_RS05390 8e116bddeef8f4496cc17d2e7778b43b 610 SMART SM00052 2 242 1.5E-9 T 14-09-2016 IPR001633 EAL domain AY555_RS07630 6fd6bdb3a7b200db8334b0ba62070b80 150 Gene3D G3DSA:3.10.129.10 11 144 2.8E-36 T 14-09-2016 IPR029069 HotDog domain AY555_RS07630 6fd6bdb3a7b200db8334b0ba62070b80 150 PANTHER PTHR12418 21 138 7.7E-26 T 14-09-2016 AY555_RS07630 6fd6bdb3a7b200db8334b0ba62070b80 150 Pfam PF03061 Thioesterase superfamily 56 128 8.6E-12 T 14-09-2016 IPR006683 Thioesterase domain AY555_RS07630 6fd6bdb3a7b200db8334b0ba62070b80 150 SUPERFAMILY SSF54637 10 136 1.11E-28 T 14-09-2016 IPR029069 HotDog domain AY555_RS07630 6fd6bdb3a7b200db8334b0ba62070b80 150 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 28 136 8.2E-17 T 14-09-2016 IPR003736 Phenylacetic acid degradation-related domain AY555_RS07630 6fd6bdb3a7b200db8334b0ba62070b80 150 PANTHER PTHR12418:SF24 21 138 7.7E-26 T 14-09-2016 AY555_RS07630 6fd6bdb3a7b200db8334b0ba62070b80 150 TIGRFAM TIGR02286 PaaD: phenylacetic acid degradation protein PaaD 28 139 1.6E-35 T 14-09-2016 IPR011973 Phenylacetic acid degradation protein PaaD GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- AY555_RS06135 4f47900c3539e7fd5e2aae734d95e1d4 361 Pfam PF00953 Glycosyl transferase family 4 100 284 2.4E-36 T 14-09-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AY555_RS06135 4f47900c3539e7fd5e2aae734d95e1d4 361 ProSitePatterns PS01348 MraY family signature 2. 190 201 - T 14-09-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AY555_RS06135 4f47900c3539e7fd5e2aae734d95e1d4 361 PANTHER PTHR22926 2 361 6.4E-160 T 14-09-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AY555_RS06135 4f47900c3539e7fd5e2aae734d95e1d4 361 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 38 361 1.3E-121 T 14-09-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AY555_RS06135 4f47900c3539e7fd5e2aae734d95e1d4 361 PANTHER PTHR22926:SF5 2 361 6.4E-160 T 14-09-2016 AY555_RS06135 4f47900c3539e7fd5e2aae734d95e1d4 361 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 24 359 24.616 T 14-09-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AY555_RS07485 143933ac0fc63b7585faabac47d9eaed 354 Gene3D G3DSA:3.40.50.300 24 69 4.7E-11 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS07485 143933ac0fc63b7585faabac47d9eaed 354 PANTHER PTHR13779 16 336 2.2E-156 T 14-09-2016 AY555_RS07485 143933ac0fc63b7585faabac47d9eaed 354 Gene3D G3DSA:1.10.10.10 261 332 1.7E-32 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS07485 143933ac0fc63b7585faabac47d9eaed 354 Gene3D G3DSA:3.40.50.300 70 194 1.4E-22 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS07485 143933ac0fc63b7585faabac47d9eaed 354 Gene3D G3DSA:1.10.8.60 195 259 7.2E-28 T 14-09-2016 AY555_RS07485 143933ac0fc63b7585faabac47d9eaed 354 SUPERFAMILY SSF52540 24 253 1.78E-51 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS07485 143933ac0fc63b7585faabac47d9eaed 354 PANTHER PTHR13779:SF25 16 336 2.2E-156 T 14-09-2016 AY555_RS07485 143933ac0fc63b7585faabac47d9eaed 354 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 354 162.609 T 14-09-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AY555_RS07485 143933ac0fc63b7585faabac47d9eaed 354 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 257 330 1.4E-32 T 14-09-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AY555_RS07485 143933ac0fc63b7585faabac47d9eaed 354 SMART SM00382 55 182 5.4E-14 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS07485 143933ac0fc63b7585faabac47d9eaed 354 SUPERFAMILY SSF46785 261 334 7.0E-24 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS07485 143933ac0fc63b7585faabac47d9eaed 354 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 17 239 7.1E-109 T 14-09-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 AY555_RS07485 143933ac0fc63b7585faabac47d9eaed 354 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 28 330 3.2E-133 T 14-09-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AY555_RS07485 143933ac0fc63b7585faabac47d9eaed 354 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 255 334 1.0E-26 T 14-09-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AY555_RS07815 14d70a57d2dc2a2b44d0da52b4da6b23 153 Pfam PF07977 FabA-like domain 20 144 1.9E-33 T 14-09-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AY555_RS07815 14d70a57d2dc2a2b44d0da52b4da6b23 153 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 11 152 32.593 T 14-09-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AY555_RS07815 14d70a57d2dc2a2b44d0da52b4da6b23 153 SUPERFAMILY SSF54637 10 151 3.51E-45 T 14-09-2016 IPR029069 HotDog domain AY555_RS07815 14d70a57d2dc2a2b44d0da52b4da6b23 153 Gene3D G3DSA:3.10.129.10 9 152 1.6E-52 T 14-09-2016 IPR029069 HotDog domain AY555_RS07815 14d70a57d2dc2a2b44d0da52b4da6b23 153 PANTHER PTHR30272 11 145 6.7E-57 T 14-09-2016 AY555_RS07815 14d70a57d2dc2a2b44d0da52b4da6b23 153 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 11 149 2.4E-53 T 14-09-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AY555_RS08250 786feb02347da351900929cae814772f 224 PANTHER PTHR30329:SF4 11 219 5.0E-33 T 14-09-2016 AY555_RS08250 786feb02347da351900929cae814772f 224 Pfam PF00691 OmpA family 108 202 1.2E-18 T 14-09-2016 IPR006665 OmpA-like domain AY555_RS08250 786feb02347da351900929cae814772f 224 SUPERFAMILY SSF103088 97 223 2.22E-26 T 14-09-2016 IPR006665 OmpA-like domain AY555_RS08250 786feb02347da351900929cae814772f 224 PANTHER PTHR30329 11 219 5.0E-33 T 14-09-2016 AY555_RS08250 786feb02347da351900929cae814772f 224 Gene3D G3DSA:3.30.1330.60 87 221 7.1E-28 T 14-09-2016 IPR006665 OmpA-like domain AY555_RS08250 786feb02347da351900929cae814772f 224 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 14 58 7.7E-15 T 14-09-2016 IPR025713 Motility protein B, N-terminal domain AY555_RS07020 63fdcee5e9dfa30c86da78e104e09ef8 433 Gene3D G3DSA:3.40.630.10 188 344 4.7E-4 T 14-09-2016 AY555_RS07020 63fdcee5e9dfa30c86da78e104e09ef8 433 Pfam PF16221 winged helix-turn-helix 353 422 2.6E-20 T 14-09-2016 IPR032622 UCP01524, winged helix-turn-helix domain AY555_RS07020 63fdcee5e9dfa30c86da78e104e09ef8 433 SUPERFAMILY SSF53187 82 350 5.81E-36 T 14-09-2016 AY555_RS07020 63fdcee5e9dfa30c86da78e104e09ef8 433 Pfam PF09940 Domain of unknown function (DUF2172) 58 148 3.8E-37 T 14-09-2016 IPR032610 Domain of unknown function DUF2172 AY555_RS07020 63fdcee5e9dfa30c86da78e104e09ef8 433 PIRSF PIRSF015244 1 425 8.9E-162 T 14-09-2016 IPR012353 Uncharacterised conserved protein UCP01524, polysaccharide biosynthesis aminopeptidase-like AY555_RS07020 63fdcee5e9dfa30c86da78e104e09ef8 433 Pfam PF16254 Domain of unknown function (DUF4910) 7 348 4.8E-102 T 14-09-2016 IPR032589 Domain of unknown function DUF4910 AY555_RS04045 3d01bf014ac7d162b0f59c9e67715adc 466 PANTHER PTHR32332:SF18 79 297 5.4E-19 T 14-09-2016 AY555_RS04045 3d01bf014ac7d162b0f59c9e67715adc 466 Pfam PF03060 Nitronate monooxygenase 147 356 1.4E-9 T 14-09-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AY555_RS04045 3d01bf014ac7d162b0f59c9e67715adc 466 SUPERFAMILY SSF51412 25 49 1.01E-8 T 14-09-2016 AY555_RS04045 3d01bf014ac7d162b0f59c9e67715adc 466 SUPERFAMILY SSF51412 79 336 1.01E-8 T 14-09-2016 AY555_RS04045 3d01bf014ac7d162b0f59c9e67715adc 466 PANTHER PTHR32332 373 440 5.4E-19 T 14-09-2016 AY555_RS04045 3d01bf014ac7d162b0f59c9e67715adc 466 PANTHER PTHR32332 79 297 5.4E-19 T 14-09-2016 AY555_RS04045 3d01bf014ac7d162b0f59c9e67715adc 466 PANTHER PTHR32332:SF18 373 440 5.4E-19 T 14-09-2016 AY555_RS04045 3d01bf014ac7d162b0f59c9e67715adc 466 Gene3D G3DSA:3.20.20.70 27 130 3.9E-6 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS04045 3d01bf014ac7d162b0f59c9e67715adc 466 Gene3D G3DSA:3.20.20.70 185 309 3.9E-6 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS04045 3d01bf014ac7d162b0f59c9e67715adc 466 PANTHER PTHR32332:SF18 4 50 5.4E-19 T 14-09-2016 AY555_RS04045 3d01bf014ac7d162b0f59c9e67715adc 466 PANTHER PTHR32332 4 50 5.4E-19 T 14-09-2016 AY555_RS02745 dcb23d5b4adaa8309069a982bd0abdf3 360 Gene3D G3DSA:2.30.300.10 2 103 1.2E-64 T 14-09-2016 AY555_RS02745 dcb23d5b4adaa8309069a982bd0abdf3 360 Gene3D G3DSA:2.30.300.10 273 344 1.2E-64 T 14-09-2016 AY555_RS02745 dcb23d5b4adaa8309069a982bd0abdf3 360 SUPERFAMILY SSF69279 163 337 5.38E-43 T 14-09-2016 AY555_RS02745 dcb23d5b4adaa8309069a982bd0abdf3 360 Gene3D G3DSA:3.55.50.10 104 175 7.6E-29 T 14-09-2016 AY555_RS02745 dcb23d5b4adaa8309069a982bd0abdf3 360 SUPERFAMILY SSF69279 2 176 8.5E-51 T 14-09-2016 AY555_RS02745 dcb23d5b4adaa8309069a982bd0abdf3 360 PIRSF PIRSF004440 1 355 1.1E-114 T 14-09-2016 IPR026276 Baseplate protein GpP AY555_RS02745 dcb23d5b4adaa8309069a982bd0abdf3 360 Gene3D G3DSA:3.30.1920.10 200 270 4.8E-12 T 14-09-2016 IPR023399 Baseplate-like protein, two-layer sandwich domain AY555_RS04405 8217bc18271ef07c9ff2f4118bbf820b 298 SUPERFAMILY SSF51120 83 243 1.47E-31 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS04405 8217bc18271ef07c9ff2f4118bbf820b 298 SUPERFAMILY SSF51120 9 117 2.96E-21 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS04405 8217bc18271ef07c9ff2f4118bbf820b 298 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 64 82 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS04405 8217bc18271ef07c9ff2f4118bbf820b 298 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 55 73 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS04405 8217bc18271ef07c9ff2f4118bbf820b 298 PRINTS PR00313 NodO calcium binding signature 74 85 5.7E-13 T 14-09-2016 AY555_RS04405 8217bc18271ef07c9ff2f4118bbf820b 298 PRINTS PR00313 NodO calcium binding signature 204 213 5.7E-13 T 14-09-2016 AY555_RS04405 8217bc18271ef07c9ff2f4118bbf820b 298 PRINTS PR00313 NodO calcium binding signature 168 176 5.7E-13 T 14-09-2016 AY555_RS04405 8217bc18271ef07c9ff2f4118bbf820b 298 PRINTS PR00313 NodO calcium binding signature 86 94 5.7E-13 T 14-09-2016 AY555_RS04405 8217bc18271ef07c9ff2f4118bbf820b 298 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 191 209 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS04405 8217bc18271ef07c9ff2f4118bbf820b 298 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 46 64 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS04405 8217bc18271ef07c9ff2f4118bbf820b 298 Pfam PF08548 Peptidase M10 serralysin C terminal 105 296 1.7E-5 T 14-09-2016 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 AY555_RS04405 8217bc18271ef07c9ff2f4118bbf820b 298 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 91 109 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS04405 8217bc18271ef07c9ff2f4118bbf820b 298 Gene3D G3DSA:2.150.10.10 80 254 5.3E-35 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS04405 8217bc18271ef07c9ff2f4118bbf820b 298 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 182 200 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS04405 8217bc18271ef07c9ff2f4118bbf820b 298 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 82 100 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS04405 8217bc18271ef07c9ff2f4118bbf820b 298 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 173 191 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS04405 8217bc18271ef07c9ff2f4118bbf820b 298 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 73 91 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS04405 8217bc18271ef07c9ff2f4118bbf820b 298 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 186 202 0.0063 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS04405 8217bc18271ef07c9ff2f4118bbf820b 298 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 68 84 0.0017 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS04405 8217bc18271ef07c9ff2f4118bbf820b 298 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 49 66 1.7E-4 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS04405 8217bc18271ef07c9ff2f4118bbf820b 298 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 167 184 0.002 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS04405 8217bc18271ef07c9ff2f4118bbf820b 298 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 149 165 0.85 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS04405 8217bc18271ef07c9ff2f4118bbf820b 298 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 31 47 0.37 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS04405 8217bc18271ef07c9ff2f4118bbf820b 298 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 86 102 0.076 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05535 cc46ad03f2f32e2b5c6daf66d1dac950 548 Gene3D G3DSA:1.10.560.10 367 519 2.4E-45 T 14-09-2016 IPR027413 GroEL-like equatorial domain AY555_RS05535 cc46ad03f2f32e2b5c6daf66d1dac950 548 Gene3D G3DSA:1.10.560.10 3 188 9.6E-46 T 14-09-2016 IPR027413 GroEL-like equatorial domain AY555_RS05535 cc46ad03f2f32e2b5c6daf66d1dac950 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 546 42.448 T 14-09-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AY555_RS05535 cc46ad03f2f32e2b5c6daf66d1dac950 548 SUPERFAMILY SSF52029 185 376 1.03E-86 T 14-09-2016 IPR027409 GroEL-like apical domain AY555_RS05535 cc46ad03f2f32e2b5c6daf66d1dac950 548 SUPERFAMILY SSF48592 406 522 6.95E-78 T 14-09-2016 AY555_RS05535 cc46ad03f2f32e2b5c6daf66d1dac950 548 SUPERFAMILY SSF48592 7 134 6.95E-78 T 14-09-2016 AY555_RS05535 cc46ad03f2f32e2b5c6daf66d1dac950 548 Gene3D G3DSA:3.50.7.10 189 366 1.3E-102 T 14-09-2016 IPR027409 GroEL-like apical domain AY555_RS05535 cc46ad03f2f32e2b5c6daf66d1dac950 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 14-09-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 AY555_RS05535 cc46ad03f2f32e2b5c6daf66d1dac950 548 SUPERFAMILY SSF54849 138 203 1.95E-22 T 14-09-2016 AY555_RS05535 cc46ad03f2f32e2b5c6daf66d1dac950 548 PRINTS PR00298 60kDa chaperonin signature 27 53 1.4E-73 T 14-09-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AY555_RS05535 cc46ad03f2f32e2b5c6daf66d1dac950 548 PRINTS PR00298 60kDa chaperonin signature 83 110 1.4E-73 T 14-09-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AY555_RS05535 cc46ad03f2f32e2b5c6daf66d1dac950 548 PRINTS PR00298 60kDa chaperonin signature 268 291 1.4E-73 T 14-09-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AY555_RS05535 cc46ad03f2f32e2b5c6daf66d1dac950 548 PRINTS PR00298 60kDa chaperonin signature 350 375 1.4E-73 T 14-09-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AY555_RS05535 cc46ad03f2f32e2b5c6daf66d1dac950 548 PRINTS PR00298 60kDa chaperonin signature 398 419 1.4E-73 T 14-09-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AY555_RS05535 cc46ad03f2f32e2b5c6daf66d1dac950 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 528 1.6E-259 T 14-09-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AY555_RS05535 cc46ad03f2f32e2b5c6daf66d1dac950 548 PANTHER PTHR11353 2 548 4.3E-265 T 14-09-2016 AY555_RS05535 cc46ad03f2f32e2b5c6daf66d1dac950 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 24 524 3.7E-99 T 14-09-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 AY555_RS02170 d728603a1b2c58cf16afe6b7323a3ee3 204 SUPERFAMILY SSF55620 12 201 1.78E-76 T 14-09-2016 AY555_RS02170 d728603a1b2c58cf16afe6b7323a3ee3 204 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 23 201 3.2E-68 T 14-09-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 AY555_RS02170 d728603a1b2c58cf16afe6b7323a3ee3 204 Gene3D G3DSA:3.30.1130.10 74 201 9.5E-57 T 14-09-2016 AY555_RS02170 d728603a1b2c58cf16afe6b7323a3ee3 204 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 18 201 39.603 T 14-09-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 AY555_RS02170 d728603a1b2c58cf16afe6b7323a3ee3 204 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 128 138 - T 14-09-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 AY555_RS02170 d728603a1b2c58cf16afe6b7323a3ee3 204 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 80 96 - T 14-09-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 AY555_RS02170 d728603a1b2c58cf16afe6b7323a3ee3 204 Gene3D G3DSA:1.10.286.10 17 68 1.7E-24 T 14-09-2016 AY555_RS02170 d728603a1b2c58cf16afe6b7323a3ee3 204 Pfam PF01227 GTP cyclohydrolase I 23 200 1.0E-75 T 14-09-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 AY555_RS02170 d728603a1b2c58cf16afe6b7323a3ee3 204 PANTHER PTHR11109 3 200 1.2E-98 T 14-09-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 AY555_RS09485 249a2263cac811f22f8d5c1a7be6dc44 411 SUPERFAMILY SSF53383 3 390 4.62E-111 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AY555_RS09485 249a2263cac811f22f8d5c1a7be6dc44 411 PANTHER PTHR11751 13 411 6.0E-215 T 14-09-2016 AY555_RS09485 249a2263cac811f22f8d5c1a7be6dc44 411 Pfam PF00155 Aminotransferase class I and II 32 383 1.2E-59 T 14-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AY555_RS09485 249a2263cac811f22f8d5c1a7be6dc44 411 Gene3D G3DSA:3.90.1150.10 259 390 7.5E-43 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AY555_RS09485 249a2263cac811f22f8d5c1a7be6dc44 411 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 14-09-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 AY555_RS09485 249a2263cac811f22f8d5c1a7be6dc44 411 Gene3D G3DSA:3.40.640.10 45 258 3.0E-63 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AY555_RS09485 249a2263cac811f22f8d5c1a7be6dc44 411 PANTHER PTHR11751:SF302 13 411 6.0E-215 T 14-09-2016 AY555_RS03755 7b61595e0e1997969fe5f47c61c8d37c 624 Gene3D G3DSA:3.50.50.60 5 221 1.9E-38 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS03755 7b61595e0e1997969fe5f47c61c8d37c 624 PANTHER PTHR11806 1 624 0.0 T 14-09-2016 AY555_RS03755 7b61595e0e1997969fe5f47c61c8d37c 624 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 3 621 41.37 T 14-09-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 AY555_RS03755 7b61595e0e1997969fe5f47c61c8d37c 624 PANTHER PTHR11806:SF0 1 624 0.0 T 14-09-2016 AY555_RS03755 7b61595e0e1997969fe5f47c61c8d37c 624 Pfam PF01134 Glucose inhibited division protein A 6 395 3.6E-164 T 14-09-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 AY555_RS03755 7b61595e0e1997969fe5f47c61c8d37c 624 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 271 285 - T 14-09-2016 IPR020595 MnmG-related, conserved site AY555_RS03755 7b61595e0e1997969fe5f47c61c8d37c 624 SMART SM01228 543 614 3.3E-36 T 14-09-2016 AY555_RS03755 7b61595e0e1997969fe5f47c61c8d37c 624 SUPERFAMILY SSF51905 95 259 8.32E-48 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS03755 7b61595e0e1997969fe5f47c61c8d37c 624 SUPERFAMILY SSF51905 4 64 8.32E-48 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS03755 7b61595e0e1997969fe5f47c61c8d37c 624 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 366 389 - T 14-09-2016 IPR020595 MnmG-related, conserved site AY555_RS03755 7b61595e0e1997969fe5f47c61c8d37c 624 Pfam PF13932 GidA associated domain 402 612 3.3E-62 T 14-09-2016 IPR026904 GidA associated domain 3 AY555_RS03755 7b61595e0e1997969fe5f47c61c8d37c 624 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 5 619 1.4E-245 T 14-09-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 AY555_RS07280 359c1213a5aeaafb7d36caba2a6a6aa7 434 SUPERFAMILY SSF55931 98 431 4.41E-105 T 14-09-2016 AY555_RS07280 359c1213a5aeaafb7d36caba2a6a6aa7 434 PANTHER PTHR20852:SF63 1 434 3.4E-200 T 14-09-2016 AY555_RS07280 359c1213a5aeaafb7d36caba2a6a6aa7 434 Pfam PF00120 Glutamine synthetase, catalytic domain 99 428 4.4E-103 T 14-09-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AY555_RS07280 359c1213a5aeaafb7d36caba2a6a6aa7 434 PANTHER PTHR20852 1 434 3.4E-200 T 14-09-2016 AY555_RS07280 359c1213a5aeaafb7d36caba2a6a6aa7 434 SMART SM01230 97 353 6.7E-110 T 14-09-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AY555_RS07280 359c1213a5aeaafb7d36caba2a6a6aa7 434 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 233 248 - T 14-09-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AY555_RS07280 359c1213a5aeaafb7d36caba2a6a6aa7 434 Gene3D G3DSA:3.30.590.10 101 420 4.3E-93 T 14-09-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 AY555_RS07280 359c1213a5aeaafb7d36caba2a6a6aa7 434 Gene3D G3DSA:3.10.20.70 3 100 7.1E-16 T 14-09-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AY555_RS07280 359c1213a5aeaafb7d36caba2a6a6aa7 434 SUPERFAMILY SSF54368 3 96 2.22E-17 T 14-09-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AY555_RS08710 6aefe3ebcb0e5218cd5e903407ee4768 643 Pfam PF06455 NADH dehydrogenase subunit 5 C-terminus 514 633 2.1E-8 T 14-09-2016 IPR010934 NADH dehydrogenase subunit 5, C-terminal GO:0008137|GO:0042773|GO:0055114 KEGG: 00190+1.6.5.3|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-5083|MetaCyc: PWY-6692 AY555_RS08710 6aefe3ebcb0e5218cd5e903407ee4768 643 PANTHER PTHR22773 6 590 8.0E-270 T 14-09-2016 AY555_RS08710 6aefe3ebcb0e5218cd5e903407ee4768 643 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 2 637 5.9E-264 T 14-09-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 AY555_RS08710 6aefe3ebcb0e5218cd5e903407ee4768 643 Pfam PF00361 Proton-conducting membrane transporter 130 420 8.0E-95 T 14-09-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 AY555_RS08710 6aefe3ebcb0e5218cd5e903407ee4768 643 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 107 127 4.0E-64 T 14-09-2016 AY555_RS08710 6aefe3ebcb0e5218cd5e903407ee4768 643 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 154 175 4.0E-64 T 14-09-2016 AY555_RS08710 6aefe3ebcb0e5218cd5e903407ee4768 643 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 251 277 4.0E-64 T 14-09-2016 AY555_RS08710 6aefe3ebcb0e5218cd5e903407ee4768 643 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 229 250 4.0E-64 T 14-09-2016 AY555_RS08710 6aefe3ebcb0e5218cd5e903407ee4768 643 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 79 104 4.0E-64 T 14-09-2016 AY555_RS08710 6aefe3ebcb0e5218cd5e903407ee4768 643 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 319 331 4.0E-64 T 14-09-2016 AY555_RS08710 6aefe3ebcb0e5218cd5e903407ee4768 643 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 424 443 4.0E-64 T 14-09-2016 AY555_RS08710 6aefe3ebcb0e5218cd5e903407ee4768 643 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 269 291 8.5E-15 T 14-09-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AY555_RS08710 6aefe3ebcb0e5218cd5e903407ee4768 643 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 423 445 8.5E-15 T 14-09-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AY555_RS08710 6aefe3ebcb0e5218cd5e903407ee4768 643 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 81 101 8.5E-15 T 14-09-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AY555_RS08710 6aefe3ebcb0e5218cd5e903407ee4768 643 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 55 79 8.5E-15 T 14-09-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AY555_RS08710 6aefe3ebcb0e5218cd5e903407ee4768 643 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 62 118 1.3E-24 T 14-09-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal AY555_RS08710 6aefe3ebcb0e5218cd5e903407ee4768 643 PANTHER PTHR22773:SF50 6 590 8.0E-270 T 14-09-2016 AY555_RS02575 404bb716bd0439c86061829647d9b40f 649 Gene3D G3DSA:3.40.50.620 495 643 1.4E-92 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS02575 404bb716bd0439c86061829647d9b40f 649 Gene3D G3DSA:3.40.50.620 229 389 1.4E-92 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS02575 404bb716bd0439c86061829647d9b40f 649 PIRSF PIRSF001589 1 647 8.1E-158 T 14-09-2016 AY555_RS02575 404bb716bd0439c86061829647d9b40f 649 Gene3D G3DSA:3.60.20.10 1 228 1.4E-68 T 14-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AY555_RS02575 404bb716bd0439c86061829647d9b40f 649 PANTHER PTHR11772:SF10 491 647 1.3E-195 T 14-09-2016 AY555_RS02575 404bb716bd0439c86061829647d9b40f 649 Pfam PF13537 Glutamine amidotransferase domain 49 172 1.9E-43 T 14-09-2016 IPR017932 Glutamine amidotransferase type 2 domain AY555_RS02575 404bb716bd0439c86061829647d9b40f 649 PANTHER PTHR11772:SF10 2 395 1.3E-195 T 14-09-2016 AY555_RS02575 404bb716bd0439c86061829647d9b40f 649 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 579 2.4E-138 T 14-09-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 AY555_RS02575 404bb716bd0439c86061829647d9b40f 649 SUPERFAMILY SSF56235 1 229 1.29E-64 T 14-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AY555_RS02575 404bb716bd0439c86061829647d9b40f 649 PANTHER PTHR11772 2 395 1.3E-195 T 14-09-2016 AY555_RS02575 404bb716bd0439c86061829647d9b40f 649 SUPERFAMILY SSF52402 243 393 1.43E-92 T 14-09-2016 AY555_RS02575 404bb716bd0439c86061829647d9b40f 649 SUPERFAMILY SSF52402 499 639 1.43E-92 T 14-09-2016 AY555_RS02575 404bb716bd0439c86061829647d9b40f 649 PANTHER PTHR11772 491 647 1.3E-195 T 14-09-2016 AY555_RS02575 404bb716bd0439c86061829647d9b40f 649 Pfam PF00733 Asparagine synthase 252 644 5.2E-116 T 14-09-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 AY555_RS07780 d1496e0e894e3b2c19376af5d75afaf7 224 Gene3D G3DSA:3.40.1180.10 1 221 7.8E-87 T 14-09-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 AY555_RS07780 d1496e0e894e3b2c19376af5d75afaf7 224 Pfam PF01255 Putative undecaprenyl diphosphate synthase 1 220 3.5E-75 T 14-09-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 AY555_RS07780 d1496e0e894e3b2c19376af5d75afaf7 224 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 1 220 7.7E-74 T 14-09-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 AY555_RS07780 d1496e0e894e3b2c19376af5d75afaf7 224 PANTHER PTHR10291 1 220 1.1E-107 T 14-09-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 AY555_RS07780 d1496e0e894e3b2c19376af5d75afaf7 224 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 1 221 34.649 T 14-09-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 AY555_RS07780 d1496e0e894e3b2c19376af5d75afaf7 224 SUPERFAMILY SSF64005 1 216 4.71E-77 T 14-09-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 AY555_RS07780 d1496e0e894e3b2c19376af5d75afaf7 224 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 166 183 - T 14-09-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 AY555_RS01020 8eba1b510e92afa6847df210ad552d2e 143 SUPERFAMILY SSF46906 68 142 3.4E-21 T 14-09-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AY555_RS01020 8eba1b510e92afa6847df210ad552d2e 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 141 1.3E-20 T 14-09-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AY555_RS01020 8eba1b510e92afa6847df210ad552d2e 143 SUPERFAMILY SSF54747 3 73 7.06E-30 T 14-09-2016 IPR020784 Ribosomal protein L11, N-terminal AY555_RS01020 8eba1b510e92afa6847df210ad552d2e 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 142 2.9E-60 T 14-09-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 AY555_RS01020 8eba1b510e92afa6847df210ad552d2e 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 143 29.937 T 14-09-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AY555_RS01020 8eba1b510e92afa6847df210ad552d2e 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.8E-28 T 14-09-2016 IPR020784 Ribosomal protein L11, N-terminal AY555_RS01020 8eba1b510e92afa6847df210ad552d2e 143 Gene3D G3DSA:3.30.1550.10 2 72 7.8E-36 T 14-09-2016 IPR020784 Ribosomal protein L11, N-terminal AY555_RS01020 8eba1b510e92afa6847df210ad552d2e 143 PANTHER PTHR11661 1 142 8.8E-61 T 14-09-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AY555_RS01020 8eba1b510e92afa6847df210ad552d2e 143 Gene3D G3DSA:1.10.10.250 73 142 1.2E-24 T 14-09-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AY555_RS01020 8eba1b510e92afa6847df210ad552d2e 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 6.0E-13 T 14-09-2016 AY555_RS01020 8eba1b510e92afa6847df210ad552d2e 143 SMART SM00649 9 142 1.5E-72 T 14-09-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AY555_RS03645 70b918cbc4e120a98f5a350769fad016 859 PANTHER PTHR11946 242 585 0.0 T 14-09-2016 AY555_RS03645 70b918cbc4e120a98f5a350769fad016 859 PANTHER PTHR11946 1 208 0.0 T 14-09-2016 AY555_RS03645 70b918cbc4e120a98f5a350769fad016 859 PANTHER PTHR11946 621 859 0.0 T 14-09-2016 AY555_RS03645 70b918cbc4e120a98f5a350769fad016 859 SUPERFAMILY SSF47323 665 858 3.92E-34 T 14-09-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS03645 70b918cbc4e120a98f5a350769fad016 859 Pfam PF08264 Anticodon-binding domain of tRNA 704 822 2.7E-17 T 14-09-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 AY555_RS03645 70b918cbc4e120a98f5a350769fad016 859 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 224 412 2.6E-64 T 14-09-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 AY555_RS03645 70b918cbc4e120a98f5a350769fad016 859 SUPERFAMILY SSF52374 425 671 3.52E-148 T 14-09-2016 AY555_RS03645 70b918cbc4e120a98f5a350769fad016 859 SUPERFAMILY SSF52374 4 228 3.52E-148 T 14-09-2016 AY555_RS03645 70b918cbc4e120a98f5a350769fad016 859 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 44 55 - T 14-09-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS03645 70b918cbc4e120a98f5a350769fad016 859 Gene3D G3DSA:3.90.740.10 225 433 8.5E-49 T 14-09-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 AY555_RS03645 70b918cbc4e120a98f5a350769fad016 859 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 7 858 0.0 T 14-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AY555_RS03645 70b918cbc4e120a98f5a350769fad016 859 SUPERFAMILY SSF50677 228 424 1.99E-47 T 14-09-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 AY555_RS03645 70b918cbc4e120a98f5a350769fad016 859 PRINTS PR00985 Leucyl-tRNA synthetase signature 129 146 7.8E-45 T 14-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AY555_RS03645 70b918cbc4e120a98f5a350769fad016 859 PRINTS PR00985 Leucyl-tRNA synthetase signature 535 557 7.8E-45 T 14-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AY555_RS03645 70b918cbc4e120a98f5a350769fad016 859 PRINTS PR00985 Leucyl-tRNA synthetase signature 155 171 7.8E-45 T 14-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AY555_RS03645 70b918cbc4e120a98f5a350769fad016 859 PRINTS PR00985 Leucyl-tRNA synthetase signature 217 236 7.8E-45 T 14-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AY555_RS03645 70b918cbc4e120a98f5a350769fad016 859 PRINTS PR00985 Leucyl-tRNA synthetase signature 496 514 7.8E-45 T 14-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AY555_RS03645 70b918cbc4e120a98f5a350769fad016 859 PRINTS PR00985 Leucyl-tRNA synthetase signature 187 200 7.8E-45 T 14-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AY555_RS03645 70b918cbc4e120a98f5a350769fad016 859 PRINTS PR00985 Leucyl-tRNA synthetase signature 568 578 7.8E-45 T 14-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AY555_RS03645 70b918cbc4e120a98f5a350769fad016 859 PANTHER PTHR11946:SF7 242 585 0.0 T 14-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AY555_RS03645 70b918cbc4e120a98f5a350769fad016 859 PANTHER PTHR11946:SF7 621 859 0.0 T 14-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AY555_RS03645 70b918cbc4e120a98f5a350769fad016 859 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 15 173 2.6E-24 T 14-09-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS03645 70b918cbc4e120a98f5a350769fad016 859 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 427 581 1.2E-6 T 14-09-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS03645 70b918cbc4e120a98f5a350769fad016 859 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 621 661 7.2E-7 T 14-09-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS03645 70b918cbc4e120a98f5a350769fad016 859 Gene3D G3DSA:1.10.730.10 651 795 4.8E-40 T 14-09-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS03645 70b918cbc4e120a98f5a350769fad016 859 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 6 859 22.729 T 14-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AY555_RS03645 70b918cbc4e120a98f5a350769fad016 859 Gene3D G3DSA:3.40.50.620 434 584 7.7E-152 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS03645 70b918cbc4e120a98f5a350769fad016 859 Gene3D G3DSA:3.40.50.620 5 224 7.7E-152 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS03645 70b918cbc4e120a98f5a350769fad016 859 Gene3D G3DSA:3.40.50.620 621 650 7.7E-152 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS03645 70b918cbc4e120a98f5a350769fad016 859 PANTHER PTHR11946:SF7 1 208 0.0 T 14-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AY555_RS01875 6b2f2000e331db0c507ffed7c5b952bc 188 PIRSF PIRSF004553 1 186 2.8E-50 T 14-09-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AY555_RS01875 6b2f2000e331db0c507ffed7c5b952bc 188 Pfam PF03602 Conserved hypothetical protein 95 1 182 4.7E-46 T 14-09-2016 AY555_RS01875 6b2f2000e331db0c507ffed7c5b952bc 188 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 121 127 - T 14-09-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AY555_RS01875 6b2f2000e331db0c507ffed7c5b952bc 188 SUPERFAMILY SSF53335 1 183 2.93E-43 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS01875 6b2f2000e331db0c507ffed7c5b952bc 188 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 183 5.6E-40 T 14-09-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AY555_RS01875 6b2f2000e331db0c507ffed7c5b952bc 188 Gene3D G3DSA:3.40.50.150 1 184 7.2E-57 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS01875 6b2f2000e331db0c507ffed7c5b952bc 188 PANTHER PTHR18895:SF60 1 186 5.0E-30 T 14-09-2016 AY555_RS01875 6b2f2000e331db0c507ffed7c5b952bc 188 PANTHER PTHR18895 1 186 5.0E-30 T 14-09-2016 AY555_RS05775 75f772edea91c89475c94f04352fd305 235 PANTHER PTHR38834 9 234 3.9E-50 T 14-09-2016 AY555_RS05775 75f772edea91c89475c94f04352fd305 235 Gene3D G3DSA:3.40.190.10 95 189 1.5E-10 T 14-09-2016 AY555_RS05775 75f772edea91c89475c94f04352fd305 235 SUPERFAMILY SSF53850 12 233 4.11E-34 T 14-09-2016 AY555_RS05775 75f772edea91c89475c94f04352fd305 235 Gene3D G3DSA:3.40.190.10 192 232 1.4E-11 T 14-09-2016 AY555_RS05775 75f772edea91c89475c94f04352fd305 235 Gene3D G3DSA:3.40.190.10 19 94 1.4E-11 T 14-09-2016 AY555_RS05775 75f772edea91c89475c94f04352fd305 235 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 232 1.2E-18 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AY555_RS05775 75f772edea91c89475c94f04352fd305 235 PANTHER PTHR38834:SF1 9 234 3.9E-50 T 14-09-2016 AY555_RS05705 211cc5391a2355a85bc18b8d8c252d2c 176 Pfam PF04386 Stringent starvation protein B 11 168 1.8E-44 T 14-09-2016 IPR007481 Stringent starvation protein B AY555_RS05705 211cc5391a2355a85bc18b8d8c252d2c 176 Gene3D G3DSA:2.30.30.220 4 116 1.2E-48 T 14-09-2016 IPR007481 Stringent starvation protein B AY555_RS05705 211cc5391a2355a85bc18b8d8c252d2c 176 SUPERFAMILY SSF101738 5 116 2.75E-42 T 14-09-2016 IPR007481 Stringent starvation protein B AY555_RS01815 067b8099a1d8080ad995752cff5a1094 582 Gene3D G3DSA:1.20.1560.10 4 315 1.7E-71 T 14-09-2016 AY555_RS01815 067b8099a1d8080ad995752cff5a1094 582 PANTHER PTHR24221 1 580 5.7E-240 T 14-09-2016 AY555_RS01815 067b8099a1d8080ad995752cff5a1094 582 SUPERFAMILY SSF52540 326 572 2.88E-95 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS01815 067b8099a1d8080ad995752cff5a1094 582 SUPERFAMILY SSF90123 5 315 2.75E-71 T 14-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AY555_RS01815 067b8099a1d8080ad995752cff5a1094 582 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AY555_RS01815 067b8099a1d8080ad995752cff5a1094 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 5 574 6.9E-183 T 14-09-2016 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 AY555_RS01815 067b8099a1d8080ad995752cff5a1094 582 Gene3D G3DSA:3.40.50.300 335 565 1.7E-84 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS01815 067b8099a1d8080ad995752cff5a1094 582 Pfam PF00664 ABC transporter transmembrane region 20 289 3.5E-46 T 14-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AY555_RS01815 067b8099a1d8080ad995752cff5a1094 582 Pfam PF00005 ABC transporter 352 501 1.5E-32 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AY555_RS01815 067b8099a1d8080ad995752cff5a1094 582 SMART SM00382 361 553 2.1E-18 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS07150 e2c1a1d939537265e4d26f692bdea550 598 PANTHER PTHR10909 1 476 9.9E-234 T 14-09-2016 AY555_RS07150 e2c1a1d939537265e4d26f692bdea550 598 SUPERFAMILY SSF56645 39 280 3.8E-62 T 14-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AY555_RS07150 e2c1a1d939537265e4d26f692bdea550 598 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 5 35 1.5E-12 T 14-09-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria AY555_RS07150 e2c1a1d939537265e4d26f692bdea550 598 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 272 6.7E-18 T 14-09-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AY555_RS07150 e2c1a1d939537265e4d26f692bdea550 598 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 40 158 3.7E-17 T 14-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AY555_RS07150 e2c1a1d939537265e4d26f692bdea550 598 Gene3D G3DSA:2.40.110.10 161 267 2.8E-28 T 14-09-2016 AY555_RS07150 e2c1a1d939537265e4d26f692bdea550 598 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 451 3.5E-21 T 14-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AY555_RS07150 e2c1a1d939537265e4d26f692bdea550 598 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 471 594 1.2E-35 T 14-09-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AY555_RS07150 e2c1a1d939537265e4d26f692bdea550 598 SUPERFAMILY SSF47203 287 472 3.06E-46 T 14-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AY555_RS07150 e2c1a1d939537265e4d26f692bdea550 598 Gene3D G3DSA:1.20.140.10 268 456 1.4E-52 T 14-09-2016 AY555_RS07150 e2c1a1d939537265e4d26f692bdea550 598 PANTHER PTHR10909:SF296 1 476 9.9E-234 T 14-09-2016 AY555_RS07150 e2c1a1d939537265e4d26f692bdea550 598 Gene3D G3DSA:1.10.540.10 39 159 1.3E-21 T 14-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AY555_RS02415 056357676fb952189560fbacbd1b99b5 502 SUPERFAMILY SSF50475 3 328 9.81E-112 T 14-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AY555_RS02415 056357676fb952189560fbacbd1b99b5 502 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 461 5.3E-160 T 14-09-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 AY555_RS02415 056357676fb952189560fbacbd1b99b5 502 Gene3D G3DSA:1.20.5.570 461 501 9.3E-12 T 14-09-2016 AY555_RS02415 056357676fb952189560fbacbd1b99b5 502 PANTHER PTHR30108:SF1 1 500 3.0E-234 T 14-09-2016 AY555_RS02415 056357676fb952189560fbacbd1b99b5 502 SUPERFAMILY SSF143968 329 493 1.44E-67 T 14-09-2016 AY555_RS02415 056357676fb952189560fbacbd1b99b5 502 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 12 437 2.6E-162 T 14-09-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 AY555_RS02415 056357676fb952189560fbacbd1b99b5 502 PANTHER PTHR30108 1 500 3.0E-234 T 14-09-2016 AY555_RS02415 056357676fb952189560fbacbd1b99b5 502 Gene3D G3DSA:3.40.1670.10 343 460 1.2E-54 T 14-09-2016 AY555_RS07030 0ca4f8e8284f8522d7348ae268af3400 456 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 14-09-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AY555_RS07030 0ca4f8e8284f8522d7348ae268af3400 456 PIRSF PIRSF000350 2 443 1.4E-86 T 14-09-2016 AY555_RS07030 0ca4f8e8284f8522d7348ae268af3400 456 PANTHER PTHR22912 4 450 2.5E-207 T 14-09-2016 AY555_RS07030 0ca4f8e8284f8522d7348ae268af3400 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 284 306 1.6E-25 T 14-09-2016 AY555_RS07030 0ca4f8e8284f8522d7348ae268af3400 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 1.6E-25 T 14-09-2016 AY555_RS07030 0ca4f8e8284f8522d7348ae268af3400 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 1.6E-25 T 14-09-2016 AY555_RS07030 0ca4f8e8284f8522d7348ae268af3400 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 1.6E-25 T 14-09-2016 AY555_RS07030 0ca4f8e8284f8522d7348ae268af3400 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.6E-25 T 14-09-2016 AY555_RS07030 0ca4f8e8284f8522d7348ae268af3400 456 PANTHER PTHR22912:SF135 4 450 2.5E-207 T 14-09-2016 AY555_RS07030 0ca4f8e8284f8522d7348ae268af3400 456 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 319 4.4E-66 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS07030 0ca4f8e8284f8522d7348ae268af3400 456 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 446 3.0E-34 T 14-09-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AY555_RS07030 0ca4f8e8284f8522d7348ae268af3400 456 SUPERFAMILY SSF55424 335 447 1.03E-32 T 14-09-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AY555_RS07030 0ca4f8e8284f8522d7348ae268af3400 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 9.3E-64 T 14-09-2016 AY555_RS07030 0ca4f8e8284f8522d7348ae268af3400 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 421 441 9.3E-64 T 14-09-2016 AY555_RS07030 0ca4f8e8284f8522d7348ae268af3400 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 9.3E-64 T 14-09-2016 AY555_RS07030 0ca4f8e8284f8522d7348ae268af3400 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 399 414 9.3E-64 T 14-09-2016 AY555_RS07030 0ca4f8e8284f8522d7348ae268af3400 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 299 306 9.3E-64 T 14-09-2016 AY555_RS07030 0ca4f8e8284f8522d7348ae268af3400 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 9.3E-64 T 14-09-2016 AY555_RS07030 0ca4f8e8284f8522d7348ae268af3400 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 9.3E-64 T 14-09-2016 AY555_RS07030 0ca4f8e8284f8522d7348ae268af3400 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 9.3E-64 T 14-09-2016 AY555_RS07030 0ca4f8e8284f8522d7348ae268af3400 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 9.3E-64 T 14-09-2016 AY555_RS07030 0ca4f8e8284f8522d7348ae268af3400 456 Gene3D G3DSA:3.50.50.60 4 134 2.1E-40 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS07030 0ca4f8e8284f8522d7348ae268af3400 456 TIGRFAM TIGR01424 gluta_reduc_2: glutathione-disulfide reductase 4 447 1.1E-196 T 14-09-2016 IPR006324 Glutathione-disulphide reductase GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 AY555_RS07030 0ca4f8e8284f8522d7348ae268af3400 456 Gene3D G3DSA:3.50.50.60 135 322 1.2E-51 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS07030 0ca4f8e8284f8522d7348ae268af3400 456 SUPERFAMILY SSF51905 4 360 1.07E-52 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS07030 0ca4f8e8284f8522d7348ae268af3400 456 Gene3D G3DSA:3.30.390.30 338 449 1.5E-42 T 14-09-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AY555_RS00580 f8cb4003e8b31b0d8f91fdd5b5af86b5 255 PANTHER PTHR20275:SF7 16 253 2.6E-98 T 14-09-2016 AY555_RS00580 f8cb4003e8b31b0d8f91fdd5b5af86b5 255 SUPERFAMILY SSF111331 22 241 4.19E-51 T 14-09-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain AY555_RS00580 f8cb4003e8b31b0d8f91fdd5b5af86b5 255 Gene3D G3DSA:2.60.200.30 110 221 1.5E-26 T 14-09-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 AY555_RS00580 f8cb4003e8b31b0d8f91fdd5b5af86b5 255 Gene3D G3DSA:3.40.50.10330 19 109 1.4E-14 T 14-09-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 AY555_RS00580 f8cb4003e8b31b0d8f91fdd5b5af86b5 255 Pfam PF01513 ATP-NAD kinase 32 182 5.8E-14 T 14-09-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 AY555_RS00580 f8cb4003e8b31b0d8f91fdd5b5af86b5 255 PANTHER PTHR20275 16 253 2.6E-98 T 14-09-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 AY555_RS04105 dee3d66262e301a64b76205d7079140b 103 Gene3D G3DSA:3.40.1350.10 4 100 2.7E-22 T 14-09-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 AY555_RS04105 dee3d66262e301a64b76205d7079140b 103 Pfam PF02021 Uncharacterised protein family UPF0102 3 86 5.1E-16 T 14-09-2016 IPR003509 Uncharacterised protein family UPF0102 AY555_RS04105 dee3d66262e301a64b76205d7079140b 103 PANTHER PTHR34039 4 103 9.8E-16 T 14-09-2016 AY555_RS04105 dee3d66262e301a64b76205d7079140b 103 PANTHER PTHR34039:SF1 4 103 9.8E-16 T 14-09-2016 AY555_RS04105 dee3d66262e301a64b76205d7079140b 103 SUPERFAMILY SSF52980 4 99 5.77E-15 T 14-09-2016 IPR011335 Restriction endonuclease type II-like AY555_RS00035 ae7956ed31958072eb44345c8ec89704 361 PRINTS PR00142 RecA protein signature 222 250 3.3E-84 T 14-09-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AY555_RS00035 ae7956ed31958072eb44345c8ec89704 361 PRINTS PR00142 RecA protein signature 255 284 3.3E-84 T 14-09-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AY555_RS00035 ae7956ed31958072eb44345c8ec89704 361 PRINTS PR00142 RecA protein signature 139 168 3.3E-84 T 14-09-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AY555_RS00035 ae7956ed31958072eb44345c8ec89704 361 PRINTS PR00142 RecA protein signature 309 326 3.3E-84 T 14-09-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AY555_RS00035 ae7956ed31958072eb44345c8ec89704 361 PRINTS PR00142 RecA protein signature 177 206 3.3E-84 T 14-09-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AY555_RS00035 ae7956ed31958072eb44345c8ec89704 361 PRINTS PR00142 RecA protein signature 105 134 3.3E-84 T 14-09-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AY555_RS00035 ae7956ed31958072eb44345c8ec89704 361 Gene3D G3DSA:3.40.50.300 46 279 2.5E-83 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS00035 ae7956ed31958072eb44345c8ec89704 361 PANTHER PTHR22942 9 347 5.5E-201 T 14-09-2016 AY555_RS00035 ae7956ed31958072eb44345c8ec89704 361 PANTHER PTHR22942:SF1 9 347 5.5E-201 T 14-09-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AY555_RS00035 ae7956ed31958072eb44345c8ec89704 361 SMART SM00382 69 240 8.8E-13 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS00035 ae7956ed31958072eb44345c8ec89704 361 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 15 335 6.2E-173 T 14-09-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AY555_RS00035 ae7956ed31958072eb44345c8ec89704 361 Pfam PF00154 recA bacterial DNA recombination protein 18 280 5.1E-146 T 14-09-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AY555_RS00035 ae7956ed31958072eb44345c8ec89704 361 SUPERFAMILY SSF52540 16 279 2.51E-67 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS00035 ae7956ed31958072eb44345c8ec89704 361 Hamap MF_00268 Protein RecA [recA]. 16 341 51.798 T 14-09-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AY555_RS00035 ae7956ed31958072eb44345c8ec89704 361 Gene3D G3DSA:3.30.250.10 280 337 6.4E-27 T 14-09-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal AY555_RS00035 ae7956ed31958072eb44345c8ec89704 361 ProSitePatterns PS00321 recA signature. 225 233 - T 14-09-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 AY555_RS00035 ae7956ed31958072eb44345c8ec89704 361 SUPERFAMILY SSF54752 280 337 6.15E-21 T 14-09-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal AY555_RS06315 8a2bff7060ab778f4487072b6b5480c5 517 PANTHER PTHR11922:SF2 1 514 1.3E-286 T 14-09-2016 AY555_RS06315 8a2bff7060ab778f4487072b6b5480c5 517 SUPERFAMILY SSF52317 2 228 8.99E-54 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AY555_RS06315 8a2bff7060ab778f4487072b6b5480c5 517 Pfam PF00958 GMP synthase C terminal domain 425 516 6.5E-45 T 14-09-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 AY555_RS06315 8a2bff7060ab778f4487072b6b5480c5 517 Gene3D G3DSA:3.30.300.10 392 517 1.2E-51 T 14-09-2016 AY555_RS06315 8a2bff7060ab778f4487072b6b5480c5 517 PANTHER PTHR11922 1 514 1.3E-286 T 14-09-2016 AY555_RS06315 8a2bff7060ab778f4487072b6b5480c5 517 Gene3D G3DSA:3.40.50.880 2 213 1.0E-58 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AY555_RS06315 8a2bff7060ab778f4487072b6b5480c5 517 PRINTS PR00097 Anthranilate synthase component II signature 77 88 1.8E-7 T 14-09-2016 AY555_RS06315 8a2bff7060ab778f4487072b6b5480c5 517 PRINTS PR00097 Anthranilate synthase component II signature 168 181 1.8E-7 T 14-09-2016 AY555_RS06315 8a2bff7060ab778f4487072b6b5480c5 517 PRINTS PR00097 Anthranilate synthase component II signature 50 59 1.8E-7 T 14-09-2016 AY555_RS06315 8a2bff7060ab778f4487072b6b5480c5 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 168 181 7.0E-9 T 14-09-2016 AY555_RS06315 8a2bff7060ab778f4487072b6b5480c5 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 77 88 7.0E-9 T 14-09-2016 AY555_RS06315 8a2bff7060ab778f4487072b6b5480c5 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 50 59 7.0E-9 T 14-09-2016 AY555_RS06315 8a2bff7060ab778f4487072b6b5480c5 517 Gene3D G3DSA:3.40.50.620 214 389 1.4E-60 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS06315 8a2bff7060ab778f4487072b6b5480c5 517 SUPERFAMILY SSF54810 396 517 5.49E-51 T 14-09-2016 AY555_RS06315 8a2bff7060ab778f4487072b6b5480c5 517 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 204 517 6.5E-150 T 14-09-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 AY555_RS06315 8a2bff7060ab778f4487072b6b5480c5 517 Pfam PF02540 NAD synthase 215 282 9.5E-7 T 14-09-2016 IPR022310 NAD/GMP synthase AY555_RS06315 8a2bff7060ab778f4487072b6b5480c5 517 Pfam PF00117 Glutamine amidotransferase class-I 7 190 3.4E-35 T 14-09-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 AY555_RS06315 8a2bff7060ab778f4487072b6b5480c5 517 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 2 517 54.061 T 14-09-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 AY555_RS06315 8a2bff7060ab778f4487072b6b5480c5 517 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 5 195 3.2E-68 T 14-09-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 AY555_RS06315 8a2bff7060ab778f4487072b6b5480c5 517 SUPERFAMILY SSF52402 188 405 1.68E-61 T 14-09-2016 AY555_RS02110 36f02387f1691aa7181fb25e417c70b2 316 PANTHER PTHR30111 11 316 5.1E-52 T 14-09-2016 AY555_RS02110 36f02387f1691aa7181fb25e417c70b2 316 Gene3D G3DSA:3.55.30.10 11 255 9.1E-65 T 14-09-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AY555_RS02110 36f02387f1691aa7181fb25e417c70b2 316 PIRSF PIRSF005261 3 312 2.2E-71 T 14-09-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AY555_RS02110 36f02387f1691aa7181fb25e417c70b2 316 SUPERFAMILY SSF64397 15 264 1.7E-56 T 14-09-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AY555_RS02110 36f02387f1691aa7181fb25e417c70b2 316 Gene3D G3DSA:3.90.1280.10 256 309 1.8E-17 T 14-09-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AY555_RS02110 36f02387f1691aa7181fb25e417c70b2 316 Pfam PF01430 Hsp33 protein 13 302 1.1E-71 T 14-09-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AY555_RS02110 36f02387f1691aa7181fb25e417c70b2 316 SUPERFAMILY SSF118352 254 310 4.32E-15 T 14-09-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AY555_RS02110 36f02387f1691aa7181fb25e417c70b2 316 PANTHER PTHR30111:SF1 11 316 5.1E-52 T 14-09-2016 AY555_RS04545 d3584d818a16992c9aa3da5e55b42f11 91 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 5 81 3.2E-22 T 14-09-2016 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system AY555_RS02940 d3584d818a16992c9aa3da5e55b42f11 91 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 5 81 3.2E-22 T 14-09-2016 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system AY555_RS03090 71d8148a686f730aed5c4dcfd916af3e 225 TIGRFAM TIGR01083 nth: endonuclease III 4 194 1.6E-79 T 14-09-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 AY555_RS03090 71d8148a686f730aed5c4dcfd916af3e 225 PANTHER PTHR10359 13 211 5.4E-85 T 14-09-2016 AY555_RS03090 71d8148a686f730aed5c4dcfd916af3e 225 Hamap MF_00942 Endonuclease III [nth]. 1 209 36.174 T 14-09-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 AY555_RS03090 71d8148a686f730aed5c4dcfd916af3e 225 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 167 1.4E-20 T 14-09-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 AY555_RS03090 71d8148a686f730aed5c4dcfd916af3e 225 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 7.1E-5 T 14-09-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 AY555_RS03090 71d8148a686f730aed5c4dcfd916af3e 225 Gene3D G3DSA:1.10.1670.10 123 208 2.0E-35 T 14-09-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal AY555_RS03090 71d8148a686f730aed5c4dcfd916af3e 225 Gene3D G3DSA:1.10.340.30 23 122 8.7E-35 T 14-09-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AY555_RS03090 71d8148a686f730aed5c4dcfd916af3e 225 SMART SM00525 186 206 3.0E-4 T 14-09-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 AY555_RS03090 71d8148a686f730aed5c4dcfd916af3e 225 SUPERFAMILY SSF48150 6 206 1.0E-69 T 14-09-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AY555_RS03090 71d8148a686f730aed5c4dcfd916af3e 225 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 14-09-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 AY555_RS03090 71d8148a686f730aed5c4dcfd916af3e 225 SMART SM00478 38 185 3.5E-57 T 14-09-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 AY555_RS03090 71d8148a686f730aed5c4dcfd916af3e 225 Pfam PF00633 Helix-hairpin-helix motif 102 128 9.1E-7 T 14-09-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 AY555_RS03090 71d8148a686f730aed5c4dcfd916af3e 225 PIRSF PIRSF001435 2 212 1.9E-49 T 14-09-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 AY555_RS03090 71d8148a686f730aed5c4dcfd916af3e 225 PANTHER PTHR10359:SF18 13 211 5.4E-85 T 14-09-2016 AY555_RS09910 0a3c8d727231be92f21281b1bc9a2a3a 292 SUPERFAMILY SSF88713 13 281 5.11E-55 T 14-09-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AY555_RS09910 0a3c8d727231be92f21281b1bc9a2a3a 292 Pfam PF04794 YdjC-like protein 14 274 2.3E-46 T 14-09-2016 IPR006879 Chitooligosaccharide deacetylase ChbG-like AY555_RS09910 0a3c8d727231be92f21281b1bc9a2a3a 292 Gene3D G3DSA:3.20.20.370 10 280 2.7E-56 T 14-09-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AY555_RS09910 0a3c8d727231be92f21281b1bc9a2a3a 292 PANTHER PTHR31609 7 280 7.5E-36 T 14-09-2016 AY555_RS08675 6ec677d2fc2802b46ea705fe6544860f 186 Gene3D G3DSA:1.10.340.30 4 165 7.2E-43 T 14-09-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AY555_RS08675 6ec677d2fc2802b46ea705fe6544860f 186 SUPERFAMILY SSF48150 3 168 3.14E-48 T 14-09-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AY555_RS08675 6ec677d2fc2802b46ea705fe6544860f 186 Pfam PF03352 Methyladenine glycosylase 11 120 4.9E-36 T 14-09-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 AY555_RS08675 6ec677d2fc2802b46ea705fe6544860f 186 PANTHER PTHR30037 4 179 1.9E-67 T 14-09-2016 AY555_RS08675 6ec677d2fc2802b46ea705fe6544860f 186 PANTHER PTHR30037:SF4 4 179 1.9E-67 T 14-09-2016 AY555_RS03610 4abcea1dc87dd13b4a212394e7c6a48d 429 Gene3D G3DSA:3.80.30.20 145 372 5.1E-65 T 14-09-2016 IPR023404 Radical SAM, alpha/beta horseshoe AY555_RS03610 4abcea1dc87dd13b4a212394e7c6a48d 429 SUPERFAMILY SSF102114 123 365 6.15E-54 T 14-09-2016 AY555_RS03610 4abcea1dc87dd13b4a212394e7c6a48d 429 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 21 404 8.6E-131 T 14-09-2016 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 AY555_RS03610 4abcea1dc87dd13b4a212394e7c6a48d 429 PANTHER PTHR11918:SF45 21 429 4.6E-119 T 14-09-2016 AY555_RS03610 4abcea1dc87dd13b4a212394e7c6a48d 429 Pfam PF00919 Uncharacterized protein family UPF0004 20 105 3.1E-18 T 14-09-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 AY555_RS03610 4abcea1dc87dd13b4a212394e7c6a48d 429 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 20 425 7.2E-105 T 14-09-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 AY555_RS03610 4abcea1dc87dd13b4a212394e7c6a48d 429 PANTHER PTHR11918 21 429 4.6E-119 T 14-09-2016 IPR023970 Methylthiotransferase/radical SAM-type protein AY555_RS03610 4abcea1dc87dd13b4a212394e7c6a48d 429 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 150 170 - T 14-09-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 AY555_RS03610 4abcea1dc87dd13b4a212394e7c6a48d 429 SMART SM00729 146 364 2.4E-54 T 14-09-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AY555_RS03610 4abcea1dc87dd13b4a212394e7c6a48d 429 Pfam PF04055 Radical SAM superfamily 151 323 1.6E-23 T 14-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AY555_RS07405 1d21fd7ce44c8eda1e4b61ab1601970a 72 Pfam PF01197 Ribosomal protein L31 1 66 4.3E-27 T 14-09-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS07405 1d21fd7ce44c8eda1e4b61ab1601970a 72 SUPERFAMILY SSF143800 1 69 5.49E-23 T 14-09-2016 AY555_RS07405 1d21fd7ce44c8eda1e4b61ab1601970a 72 PRINTS PR01249 Ribosomal protein L31 signature 47 65 7.6E-15 T 14-09-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS07405 1d21fd7ce44c8eda1e4b61ab1601970a 72 PRINTS PR01249 Ribosomal protein L31 signature 2 19 7.6E-15 T 14-09-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS07405 1d21fd7ce44c8eda1e4b61ab1601970a 72 PRINTS PR01249 Ribosomal protein L31 signature 32 47 7.6E-15 T 14-09-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS07405 1d21fd7ce44c8eda1e4b61ab1601970a 72 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 1.8E-33 T 14-09-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS07405 1d21fd7ce44c8eda1e4b61ab1601970a 72 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 26.893 T 14-09-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS07405 1d21fd7ce44c8eda1e4b61ab1601970a 72 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 14-09-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS07405 1d21fd7ce44c8eda1e4b61ab1601970a 72 PANTHER PTHR33280 1 68 1.0E-27 T 14-09-2016 AY555_RS06150 d7b7ff50a521ca73721039b7ea5e61f0 604 SUPERFAMILY SSF56519 92 229 3.01E-30 T 14-09-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AY555_RS06150 d7b7ff50a521ca73721039b7ea5e61f0 604 PANTHER PTHR30627 34 600 6.9E-119 T 14-09-2016 AY555_RS06150 d7b7ff50a521ca73721039b7ea5e61f0 604 Gene3D G3DSA:3.90.1310.10 165 225 2.3E-10 T 14-09-2016 AY555_RS06150 d7b7ff50a521ca73721039b7ea5e61f0 604 Gene3D G3DSA:3.40.710.10 234 562 2.8E-75 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AY555_RS06150 d7b7ff50a521ca73721039b7ea5e61f0 604 Pfam PF03717 Penicillin-binding Protein dimerisation domain 99 207 4.3E-11 T 14-09-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AY555_RS06150 d7b7ff50a521ca73721039b7ea5e61f0 604 Pfam PF00905 Penicillin binding protein transpeptidase domain 260 540 9.7E-52 T 14-09-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AY555_RS06150 d7b7ff50a521ca73721039b7ea5e61f0 604 SUPERFAMILY SSF56601 234 568 2.25E-73 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AY555_RS06150 d7b7ff50a521ca73721039b7ea5e61f0 604 PANTHER PTHR30627:SF1 34 600 6.9E-119 T 14-09-2016 AY555_RS01335 393a9bc1de7a25ebffb3bf78be6931af 257 PANTHER PTHR10266 6 255 1.5E-114 T 14-09-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 AY555_RS01335 393a9bc1de7a25ebffb3bf78be6931af 257 Pfam PF02167 Cytochrome C1 family 37 255 3.8E-94 T 14-09-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 AY555_RS01335 393a9bc1de7a25ebffb3bf78be6931af 257 PRINTS PR00603 Cytochrome C1 signature 55 74 1.0E-63 T 14-09-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 AY555_RS01335 393a9bc1de7a25ebffb3bf78be6931af 257 PRINTS PR00603 Cytochrome C1 signature 171 182 1.0E-63 T 14-09-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 AY555_RS01335 393a9bc1de7a25ebffb3bf78be6931af 257 PRINTS PR00603 Cytochrome C1 signature 35 54 1.0E-63 T 14-09-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 AY555_RS01335 393a9bc1de7a25ebffb3bf78be6931af 257 PRINTS PR00603 Cytochrome C1 signature 202 221 1.0E-63 T 14-09-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 AY555_RS01335 393a9bc1de7a25ebffb3bf78be6931af 257 PRINTS PR00603 Cytochrome C1 signature 133 157 1.0E-63 T 14-09-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 AY555_RS01335 393a9bc1de7a25ebffb3bf78be6931af 257 PRINTS PR00603 Cytochrome C1 signature 100 120 1.0E-63 T 14-09-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 AY555_RS01335 393a9bc1de7a25ebffb3bf78be6931af 257 PRINTS PR00603 Cytochrome C1 signature 221 236 1.0E-63 T 14-09-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 AY555_RS01335 393a9bc1de7a25ebffb3bf78be6931af 257 PRINTS PR00603 Cytochrome C1 signature 182 201 1.0E-63 T 14-09-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 AY555_RS01335 393a9bc1de7a25ebffb3bf78be6931af 257 PANTHER PTHR10266:SF3 6 255 1.5E-114 T 14-09-2016 AY555_RS01335 393a9bc1de7a25ebffb3bf78be6931af 257 Gene3D G3DSA:1.20.5.100 222 257 1.6E-16 T 14-09-2016 AY555_RS01335 393a9bc1de7a25ebffb3bf78be6931af 257 Gene3D G3DSA:1.10.760.10 30 221 8.8E-78 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AY555_RS01335 393a9bc1de7a25ebffb3bf78be6931af 257 SUPERFAMILY SSF46626 32 220 1.04E-65 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AY555_RS08270 44ad9ff7f71a20ff8f5781bc6ebe2545 836 Pfam PF01627 Hpt domain 740 803 3.5E-7 T 14-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AY555_RS08270 44ad9ff7f71a20ff8f5781bc6ebe2545 836 SUPERFAMILY SSF55785 278 385 3.49E-13 T 14-09-2016 IPR000014 PAS domain AY555_RS08270 44ad9ff7f71a20ff8f5781bc6ebe2545 836 SMART SM00091 278 344 7.5E-6 T 14-09-2016 IPR000014 PAS domain AY555_RS08270 44ad9ff7f71a20ff8f5781bc6ebe2545 836 Gene3D G3DSA:3.30.450.20 279 385 8.1E-14 T 14-09-2016 AY555_RS08270 44ad9ff7f71a20ff8f5781bc6ebe2545 836 Gene3D G3DSA:1.20.120.160 724 821 1.7E-15 T 14-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AY555_RS08270 44ad9ff7f71a20ff8f5781bc6ebe2545 836 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 283 399 4.0E-9 T 14-09-2016 IPR000014 PAS domain AY555_RS08270 44ad9ff7f71a20ff8f5781bc6ebe2545 836 PANTHER PTHR24423 570 725 4.4E-39 T 14-09-2016 AY555_RS08270 44ad9ff7f71a20ff8f5781bc6ebe2545 836 SUPERFAMILY SSF47226 711 820 2.75E-14 T 14-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AY555_RS08270 44ad9ff7f71a20ff8f5781bc6ebe2545 836 SMART SM00448 571 686 3.3E-30 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS08270 44ad9ff7f71a20ff8f5781bc6ebe2545 836 SUPERFAMILY SSF52172 569 690 6.4E-33 T 14-09-2016 IPR011006 CheY-like superfamily AY555_RS08270 44ad9ff7f71a20ff8f5781bc6ebe2545 836 Pfam PF00989 PAS fold 280 387 1.7E-6 T 14-09-2016 IPR013767 PAS fold GO:0006355 AY555_RS08270 44ad9ff7f71a20ff8f5781bc6ebe2545 836 Pfam PF00072 Response regulator receiver domain 573 686 2.2E-22 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS08270 44ad9ff7f71a20ff8f5781bc6ebe2545 836 Gene3D G3DSA:3.40.50.2300 562 690 6.6E-36 T 14-09-2016 AY555_RS09405 530ba81ba99e262842ac1ebcfd3cffcf 141 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 15 136 5.9E-51 T 14-09-2016 IPR014170 TonB system transport protein ExbD type-1 GO:0006810|GO:0016020 AY555_RS09405 530ba81ba99e262842ac1ebcfd3cffcf 141 PANTHER PTHR30558 11 136 2.3E-49 T 14-09-2016 AY555_RS09405 530ba81ba99e262842ac1ebcfd3cffcf 141 Pfam PF02472 Biopolymer transport protein ExbD/TolR 15 133 1.7E-24 T 14-09-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 AY555_RS09405 530ba81ba99e262842ac1ebcfd3cffcf 141 PANTHER PTHR30558:SF9 11 136 2.3E-49 T 14-09-2016 AY555_RS05695 b3a255a40fd16247d4d14f256cd906a1 268 PANTHER PTHR11548 1 268 1.1E-178 T 14-09-2016 AY555_RS05695 b3a255a40fd16247d4d14f256cd906a1 268 ProSitePatterns PS00091 Thymidylate synthase active site. 130 158 - T 14-09-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AY555_RS05695 b3a255a40fd16247d4d14f256cd906a1 268 SUPERFAMILY SSF55831 1 268 4.71E-126 T 14-09-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AY555_RS05695 b3a255a40fd16247d4d14f256cd906a1 268 Gene3D G3DSA:3.30.572.10 1 268 5.2E-129 T 14-09-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AY555_RS05695 b3a255a40fd16247d4d14f256cd906a1 268 Hamap MF_00008 Thymidylate synthase [thyA]. 1 268 46.005 T 14-09-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AY555_RS05695 b3a255a40fd16247d4d14f256cd906a1 268 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 268 3.6E-93 T 14-09-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AY555_RS05695 b3a255a40fd16247d4d14f256cd906a1 268 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 3.8E-41 T 14-09-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AY555_RS05695 b3a255a40fd16247d4d14f256cd906a1 268 PRINTS PR00108 Thymidylate synthase family signature 119 138 2.3E-49 T 14-09-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AY555_RS05695 b3a255a40fd16247d4d14f256cd906a1 268 PRINTS PR00108 Thymidylate synthase family signature 163 189 2.3E-49 T 14-09-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AY555_RS05695 b3a255a40fd16247d4d14f256cd906a1 268 PRINTS PR00108 Thymidylate synthase family signature 201 218 2.3E-49 T 14-09-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AY555_RS05695 b3a255a40fd16247d4d14f256cd906a1 268 PRINTS PR00108 Thymidylate synthase family signature 145 160 2.3E-49 T 14-09-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AY555_RS05695 b3a255a40fd16247d4d14f256cd906a1 268 PRINTS PR00108 Thymidylate synthase family signature 42 63 2.3E-49 T 14-09-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AY555_RS05695 b3a255a40fd16247d4d14f256cd906a1 268 Pfam PF00303 Thymidylate synthase 2 268 2.8E-122 T 14-09-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AY555_RS02435 2d9b38d394b930ceb51d06d30dabd253 802 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 535 645 1.0E-24 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS02435 2d9b38d394b930ceb51d06d30dabd253 802 Pfam PF00989 PAS fold 299 397 1.8E-8 T 14-09-2016 IPR013767 PAS fold GO:0006355 AY555_RS02435 2d9b38d394b930ceb51d06d30dabd253 802 Gene3D G3DSA:3.40.50.2300 665 791 6.0E-34 T 14-09-2016 AY555_RS02435 2d9b38d394b930ceb51d06d30dabd253 802 PRINTS PR00344 Bacterial sensor protein C-terminal signature 607 625 2.0E-14 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS02435 2d9b38d394b930ceb51d06d30dabd253 802 PRINTS PR00344 Bacterial sensor protein C-terminal signature 591 601 2.0E-14 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS02435 2d9b38d394b930ceb51d06d30dabd253 802 PRINTS PR00344 Bacterial sensor protein C-terminal signature 631 644 2.0E-14 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS02435 2d9b38d394b930ceb51d06d30dabd253 802 PRINTS PR00344 Bacterial sensor protein C-terminal signature 573 587 2.0E-14 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS02435 2d9b38d394b930ceb51d06d30dabd253 802 SUPERFAMILY SSF55874 477 645 2.75E-41 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS02435 2d9b38d394b930ceb51d06d30dabd253 802 SMART SM00388 420 488 2.3E-24 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS02435 2d9b38d394b930ceb51d06d30dabd253 802 SMART SM00448 670 784 1.0E-29 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS02435 2d9b38d394b930ceb51d06d30dabd253 802 SUPERFAMILY SSF55785 268 398 1.2E-18 T 14-09-2016 IPR000014 PAS domain AY555_RS02435 2d9b38d394b930ceb51d06d30dabd253 802 Pfam PF00072 Response regulator receiver domain 672 784 1.4E-22 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS02435 2d9b38d394b930ceb51d06d30dabd253 802 Gene3D G3DSA:3.30.565.10 474 646 3.4E-40 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS02435 2d9b38d394b930ceb51d06d30dabd253 802 SUPERFAMILY SSF52172 668 789 6.12E-34 T 14-09-2016 IPR011006 CheY-like superfamily AY555_RS02435 2d9b38d394b930ceb51d06d30dabd253 802 Gene3D G3DSA:1.10.287.130 412 473 1.9E-19 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS02435 2d9b38d394b930ceb51d06d30dabd253 802 Gene3D G3DSA:3.30.450.20 268 398 1.5E-18 T 14-09-2016 AY555_RS02435 2d9b38d394b930ceb51d06d30dabd253 802 Pfam PF00512 His Kinase A (phospho-acceptor) domain 420 488 2.1E-20 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS02435 2d9b38d394b930ceb51d06d30dabd253 802 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 279 404 5.0E-12 T 14-09-2016 IPR000014 PAS domain AY555_RS02435 2d9b38d394b930ceb51d06d30dabd253 802 SUPERFAMILY SSF47384 405 489 3.53E-24 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS02435 2d9b38d394b930ceb51d06d30dabd253 802 PANTHER PTHR24423 267 790 4.9E-136 T 14-09-2016 AY555_RS02435 2d9b38d394b930ceb51d06d30dabd253 802 SMART SM00387 534 647 6.6E-31 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS02150 2eb72ea31e12fc9cb8b0d2d48da216eb 236 Pfam PF03472 Autoinducer binding domain 28 148 5.0E-13 T 14-09-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AY555_RS02150 2eb72ea31e12fc9cb8b0d2d48da216eb 236 SUPERFAMILY SSF75516 8 155 2.62E-15 T 14-09-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AY555_RS02150 2eb72ea31e12fc9cb8b0d2d48da216eb 236 Gene3D G3DSA:3.30.450.80 8 157 3.6E-15 T 14-09-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AY555_RS02150 2eb72ea31e12fc9cb8b0d2d48da216eb 236 Gene3D G3DSA:1.10.10.10 169 209 9.7E-5 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS04365 09b27c9a9e92f4391b03aeebd7bd975b 375 PANTHER PTHR24078:SF190 1 350 1.6E-140 T 14-09-2016 AY555_RS04365 09b27c9a9e92f4391b03aeebd7bd975b 375 SUPERFAMILY SSF57938 133 209 4.58E-20 T 14-09-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AY555_RS04365 09b27c9a9e92f4391b03aeebd7bd975b 375 Pfam PF00226 DnaJ domain 6 68 6.5E-22 T 14-09-2016 IPR001623 DnaJ domain AY555_RS04365 09b27c9a9e92f4391b03aeebd7bd975b 375 SMART SM00271 5 63 1.2E-23 T 14-09-2016 IPR001623 DnaJ domain AY555_RS04365 09b27c9a9e92f4391b03aeebd7bd975b 375 Pfam PF00684 DnaJ central domain 146 206 2.4E-13 T 14-09-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AY555_RS04365 09b27c9a9e92f4391b03aeebd7bd975b 375 PANTHER PTHR24078 1 350 1.6E-140 T 14-09-2016 AY555_RS04365 09b27c9a9e92f4391b03aeebd7bd975b 375 SUPERFAMILY SSF49493 258 344 1.31E-23 T 14-09-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AY555_RS04365 09b27c9a9e92f4391b03aeebd7bd975b 375 Gene3D G3DSA:2.60.260.20 209 253 3.1E-23 T 14-09-2016 AY555_RS04365 09b27c9a9e92f4391b03aeebd7bd975b 375 Gene3D G3DSA:2.60.260.20 106 139 3.1E-23 T 14-09-2016 AY555_RS04365 09b27c9a9e92f4391b03aeebd7bd975b 375 PRINTS PR00625 DnaJ domain signature 26 41 1.1E-24 T 14-09-2016 IPR001623 DnaJ domain AY555_RS04365 09b27c9a9e92f4391b03aeebd7bd975b 375 PRINTS PR00625 DnaJ domain signature 63 82 1.1E-24 T 14-09-2016 IPR001623 DnaJ domain AY555_RS04365 09b27c9a9e92f4391b03aeebd7bd975b 375 PRINTS PR00625 DnaJ domain signature 8 26 1.1E-24 T 14-09-2016 IPR001623 DnaJ domain AY555_RS04365 09b27c9a9e92f4391b03aeebd7bd975b 375 PRINTS PR00625 DnaJ domain signature 43 63 1.1E-24 T 14-09-2016 IPR001623 DnaJ domain AY555_RS04365 09b27c9a9e92f4391b03aeebd7bd975b 375 Gene3D G3DSA:1.10.287.110 2 105 3.8E-30 T 14-09-2016 IPR001623 DnaJ domain AY555_RS04365 09b27c9a9e92f4391b03aeebd7bd975b 375 Pfam PF01556 DnaJ C terminal domain 119 333 2.5E-41 T 14-09-2016 IPR002939 Chaperone DnaJ, C-terminal AY555_RS04365 09b27c9a9e92f4391b03aeebd7bd975b 375 SUPERFAMILY SSF46565 2 101 1.83E-29 T 14-09-2016 IPR001623 DnaJ domain AY555_RS04365 09b27c9a9e92f4391b03aeebd7bd975b 375 SUPERFAMILY SSF49493 113 168 1.44E-19 T 14-09-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AY555_RS04365 09b27c9a9e92f4391b03aeebd7bd975b 375 SUPERFAMILY SSF49493 212 260 1.44E-19 T 14-09-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AY555_RS04365 09b27c9a9e92f4391b03aeebd7bd975b 375 Gene3D G3DSA:2.10.230.10 140 208 3.7E-21 T 14-09-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AY555_RS04365 09b27c9a9e92f4391b03aeebd7bd975b 375 Gene3D G3DSA:2.60.260.20 255 333 2.1E-22 T 14-09-2016 AY555_RS04365 09b27c9a9e92f4391b03aeebd7bd975b 375 ProSitePatterns PS00636 Nt-dnaJ domain signature. 48 67 - T 14-09-2016 IPR018253 DnaJ domain, conserved site AY555_RS04365 09b27c9a9e92f4391b03aeebd7bd975b 375 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 6 349 2.3E-125 T 14-09-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AY555_RS04365 09b27c9a9e92f4391b03aeebd7bd975b 375 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 3 369 39.147 T 14-09-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AY555_RS06115 af4fe675e7f3097e44364671469abf4a 476 PANTHER PTHR23135 3 455 1.3E-186 T 14-09-2016 AY555_RS06115 af4fe675e7f3097e44364671469abf4a 476 SUPERFAMILY SSF53244 318 460 9.89E-46 T 14-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AY555_RS06115 af4fe675e7f3097e44364671469abf4a 476 Pfam PF02875 Mur ligase family, glutamate ligase domain 319 403 5.0E-21 T 14-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AY555_RS06115 af4fe675e7f3097e44364671469abf4a 476 Pfam PF08245 Mur ligase middle domain 113 298 1.6E-25 T 14-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AY555_RS06115 af4fe675e7f3097e44364671469abf4a 476 SUPERFAMILY SSF51984 11 95 8.5E-27 T 14-09-2016 AY555_RS06115 af4fe675e7f3097e44364671469abf4a 476 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 8 466 40.036 T 14-09-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AY555_RS06115 af4fe675e7f3097e44364671469abf4a 476 Gene3D G3DSA:3.40.1190.10 97 320 8.7E-77 T 14-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AY555_RS06115 af4fe675e7f3097e44364671469abf4a 476 Gene3D G3DSA:3.40.50.720 10 96 4.7E-34 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS06115 af4fe675e7f3097e44364671469abf4a 476 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 11 459 9.1E-154 T 14-09-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AY555_RS06115 af4fe675e7f3097e44364671469abf4a 476 SUPERFAMILY SSF53623 94 317 4.32E-64 T 14-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AY555_RS06115 af4fe675e7f3097e44364671469abf4a 476 Pfam PF01225 Mur ligase family, catalytic domain 11 108 1.8E-26 T 14-09-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 AY555_RS06115 af4fe675e7f3097e44364671469abf4a 476 Gene3D G3DSA:3.90.190.20 321 464 5.7E-50 T 14-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AY555_RS06115 af4fe675e7f3097e44364671469abf4a 476 PANTHER PTHR23135:SF5 3 455 1.3E-186 T 14-09-2016 AY555_RS01460 b5e704c78f506763505d2f0cb7ca211f 200 Pfam PF03641 Possible lysine decarboxylase 53 180 4.2E-40 T 14-09-2016 IPR031100 LOG family AY555_RS01460 b5e704c78f506763505d2f0cb7ca211f 200 Gene3D G3DSA:3.40.50.450 6 182 5.1E-67 T 14-09-2016 AY555_RS01460 b5e704c78f506763505d2f0cb7ca211f 200 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 10 182 1.4E-58 T 14-09-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG AY555_RS01460 b5e704c78f506763505d2f0cb7ca211f 200 PANTHER PTHR31223 6 182 3.5E-77 T 14-09-2016 AY555_RS01460 b5e704c78f506763505d2f0cb7ca211f 200 SUPERFAMILY SSF102405 9 181 2.14E-60 T 14-09-2016 AY555_RS01460 b5e704c78f506763505d2f0cb7ca211f 200 PANTHER PTHR31223:SF0 6 182 3.5E-77 T 14-09-2016 AY555_RS02375 b4fef1d61650283c34a41434ce9f0651 354 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 19 351 1.2E-81 T 14-09-2016 IPR011852 TRAP transporter solute receptor, TAXI family AY555_RS02375 b4fef1d61650283c34a41434ce9f0651 354 Pfam PF16868 NMT1-like family 50 351 4.8E-76 T 14-09-2016 IPR011852 TRAP transporter solute receptor, TAXI family AY555_RS02375 b4fef1d61650283c34a41434ce9f0651 354 Gene3D G3DSA:3.40.190.10 46 139 1.4E-42 T 14-09-2016 AY555_RS02375 b4fef1d61650283c34a41434ce9f0651 354 Gene3D G3DSA:3.40.190.10 282 351 1.4E-42 T 14-09-2016 AY555_RS02375 b4fef1d61650283c34a41434ce9f0651 354 PANTHER PTHR30024:SF12 89 351 3.3E-48 T 14-09-2016 AY555_RS02375 b4fef1d61650283c34a41434ce9f0651 354 PANTHER PTHR30024 89 351 3.3E-48 T 14-09-2016 AY555_RS02375 b4fef1d61650283c34a41434ce9f0651 354 SUPERFAMILY SSF53850 46 351 1.71E-68 T 14-09-2016 AY555_RS02375 b4fef1d61650283c34a41434ce9f0651 354 Gene3D G3DSA:3.40.190.10 148 281 3.2E-32 T 14-09-2016 AY555_RS02640 d9ac61d434526e18d8b2023cab49ee83 335 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 237 2.3E-55 T 14-09-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AY555_RS02640 d9ac61d434526e18d8b2023cab49ee83 335 Gene3D G3DSA:3.40.50.720 1 196 7.1E-62 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS02640 d9ac61d434526e18d8b2023cab49ee83 335 PANTHER PTHR10366 255 335 6.5E-176 T 14-09-2016 AY555_RS02640 d9ac61d434526e18d8b2023cab49ee83 335 SUPERFAMILY SSF51735 1 333 2.52E-90 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS02640 d9ac61d434526e18d8b2023cab49ee83 335 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 5.8E-28 T 14-09-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 AY555_RS02640 d9ac61d434526e18d8b2023cab49ee83 335 PRINTS PR01713 Nucleotide sugar epimerase signature 216 231 5.8E-28 T 14-09-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 AY555_RS02640 d9ac61d434526e18d8b2023cab49ee83 335 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 5.8E-28 T 14-09-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 AY555_RS02640 d9ac61d434526e18d8b2023cab49ee83 335 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 5.8E-28 T 14-09-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 AY555_RS02640 d9ac61d434526e18d8b2023cab49ee83 335 PANTHER PTHR10366:SF77 2 236 6.5E-176 T 14-09-2016 AY555_RS02640 d9ac61d434526e18d8b2023cab49ee83 335 PANTHER PTHR10366:SF77 255 335 6.5E-176 T 14-09-2016 AY555_RS02640 d9ac61d434526e18d8b2023cab49ee83 335 Gene3D G3DSA:3.90.25.10 296 331 4.2E-21 T 14-09-2016 AY555_RS02640 d9ac61d434526e18d8b2023cab49ee83 335 Gene3D G3DSA:3.90.25.10 197 231 4.2E-21 T 14-09-2016 AY555_RS02640 d9ac61d434526e18d8b2023cab49ee83 335 PANTHER PTHR10366 2 236 6.5E-176 T 14-09-2016 AY555_RS05190 c41204d49f77473db5a0f48b733e23aa 284 Gene3D G3DSA:2.160.10.10 96 248 2.5E-54 T 14-09-2016 AY555_RS05190 c41204d49f77473db5a0f48b733e23aa 284 PANTHER PTHR19136:SF52 20 283 8.0E-106 T 14-09-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 AY555_RS05190 c41204d49f77473db5a0f48b733e23aa 284 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 139 173 8.8E-5 T 14-09-2016 IPR001451 Hexapeptide repeat AY555_RS05190 c41204d49f77473db5a0f48b733e23aa 284 PANTHER PTHR19136 20 283 8.0E-106 T 14-09-2016 AY555_RS05190 c41204d49f77473db5a0f48b733e23aa 284 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 182 217 9.3E-13 T 14-09-2016 IPR001451 Hexapeptide repeat AY555_RS05190 c41204d49f77473db5a0f48b733e23aa 284 Gene3D G3DSA:1.10.166.10 8 74 8.5E-28 T 14-09-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 AY555_RS05190 c41204d49f77473db5a0f48b733e23aa 284 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 7 284 54.437 T 14-09-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 AY555_RS05190 c41204d49f77473db5a0f48b733e23aa 284 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 10 283 3.3E-124 T 14-09-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 AY555_RS05190 c41204d49f77473db5a0f48b733e23aa 284 SUPERFAMILY SSF51161 10 267 1.18E-64 T 14-09-2016 IPR011004 Trimeric LpxA-like AY555_RS05190 c41204d49f77473db5a0f48b733e23aa 284 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 9 74 1.1E-23 T 14-09-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 AY555_RS09145 fb9294ab6505a1a7adcd673c298bb3de 205 Pfam PF02660 Glycerol-3-phosphate acyltransferase 19 191 1.1E-49 T 14-09-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 AY555_RS09145 fb9294ab6505a1a7adcd673c298bb3de 205 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 15 200 19.621 T 14-09-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 AY555_RS09145 fb9294ab6505a1a7adcd673c298bb3de 205 SMART SM01207 18 192 2.5E-77 T 14-09-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 AY555_RS09145 fb9294ab6505a1a7adcd673c298bb3de 205 PANTHER PTHR30309 9 199 6.9E-66 T 14-09-2016 AY555_RS09145 fb9294ab6505a1a7adcd673c298bb3de 205 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 13 200 1.1E-53 T 14-09-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 AY555_RS09145 fb9294ab6505a1a7adcd673c298bb3de 205 PANTHER PTHR30309:SF0 9 199 6.9E-66 T 14-09-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 AY555_RS08280 fa0e298ff212ddda888d7186910caf08 335 PANTHER PTHR11082:SF25 7 332 7.5E-123 T 14-09-2016 AY555_RS08280 fa0e298ff212ddda888d7186910caf08 335 Gene3D G3DSA:3.20.20.70 18 250 1.2E-77 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS08280 fa0e298ff212ddda888d7186910caf08 335 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 101 119 - T 14-09-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AY555_RS08280 fa0e298ff212ddda888d7186910caf08 335 Pfam PF01207 Dihydrouridine synthase (Dus) 21 317 3.1E-99 T 14-09-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AY555_RS08280 fa0e298ff212ddda888d7186910caf08 335 PANTHER PTHR11082 7 332 7.5E-123 T 14-09-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AY555_RS08280 fa0e298ff212ddda888d7186910caf08 335 PIRSF PIRSF006621 7 333 1.3E-101 T 14-09-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AY555_RS08280 fa0e298ff212ddda888d7186910caf08 335 Gene3D G3DSA:1.10.1200.80 259 328 1.3E-15 T 14-09-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 AY555_RS08280 fa0e298ff212ddda888d7186910caf08 335 SUPERFAMILY SSF51395 18 314 1.32E-83 T 14-09-2016 AY555_RS08280 fa0e298ff212ddda888d7186910caf08 335 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 10 326 5.8E-111 T 14-09-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 AY555_RS09865 12dd0a0374c20d116ccd8b8c8130b57e 170 PANTHER PTHR33619 1 163 5.4E-32 T 14-09-2016 AY555_RS09865 12dd0a0374c20d116ccd8b8c8130b57e 170 Gene3D G3DSA:3.30.1950.10 28 96 1.2E-12 T 14-09-2016 AY555_RS09865 12dd0a0374c20d116ccd8b8c8130b57e 170 Gene3D G3DSA:3.10.560.10 97 161 1.4E-9 T 14-09-2016 AY555_RS09865 12dd0a0374c20d116ccd8b8c8130b57e 170 Pfam PF10531 SLBB domain 100 145 3.0E-9 T 14-09-2016 IPR019554 Soluble ligand binding domain AY555_RS09865 12dd0a0374c20d116ccd8b8c8130b57e 170 Pfam PF02563 Polysaccharide biosynthesis/export protein 23 94 5.9E-15 T 14-09-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AY555_RS03860 d6904dbd11075e9bb34568bd68629d6b 394 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 7 389 3.5E-82 T 14-09-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 AY555_RS03860 d6904dbd11075e9bb34568bd68629d6b 394 PANTHER PTHR11113:SF7 4 389 1.1E-98 T 14-09-2016 AY555_RS03860 d6904dbd11075e9bb34568bd68629d6b 394 PIRSF PIRSF038994 13 393 1.2E-89 T 14-09-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 AY555_RS03860 d6904dbd11075e9bb34568bd68629d6b 394 PANTHER PTHR11113 4 389 1.1E-98 T 14-09-2016 AY555_RS03860 d6904dbd11075e9bb34568bd68629d6b 394 Pfam PF01979 Amidohydrolase family 56 389 2.0E-14 T 14-09-2016 IPR006680 Amidohydrolase-related GO:0016787 AY555_RS03860 d6904dbd11075e9bb34568bd68629d6b 394 SUPERFAMILY SSF51338 363 390 2.55E-7 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AY555_RS03860 d6904dbd11075e9bb34568bd68629d6b 394 SUPERFAMILY SSF51338 8 59 2.55E-7 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AY555_RS03860 d6904dbd11075e9bb34568bd68629d6b 394 Gene3D G3DSA:2.30.40.10 4 60 5.5E-5 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AY555_RS03860 d6904dbd11075e9bb34568bd68629d6b 394 SUPERFAMILY SSF51556 60 363 3.18E-81 T 14-09-2016 IPR032466 Metal-dependent hydrolase AY555_RS03860 d6904dbd11075e9bb34568bd68629d6b 394 Gene3D G3DSA:3.20.20.140 61 349 5.3E-79 T 14-09-2016 AY555_RS03860 d6904dbd11075e9bb34568bd68629d6b 394 Gene3D G3DSA:2.30.40.10 350 389 5.3E-5 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AY555_RS03325 772909bda515069aae63eb4dd526ae0a 348 Pfam PF05050 Methyltransferase FkbM domain 116 211 7.5E-12 T 14-09-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- AY555_RS03325 772909bda515069aae63eb4dd526ae0a 348 SUPERFAMILY SSF53335 136 216 3.99E-9 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS03325 772909bda515069aae63eb4dd526ae0a 348 Gene3D G3DSA:3.40.50.150 136 213 6.8E-8 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS05320 8691ccab5c70fa549bd4249fdb83e17c 295 Pfam PF01817 Chorismate mutase type II 17 97 1.2E-17 T 14-09-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 AY555_RS05320 8691ccab5c70fa549bd4249fdb83e17c 295 SUPERFAMILY SSF48600 10 97 3.05E-17 T 14-09-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 AY555_RS05320 8691ccab5c70fa549bd4249fdb83e17c 295 SMART SM00830 17 100 3.0E-19 T 14-09-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 AY555_RS05320 8691ccab5c70fa549bd4249fdb83e17c 295 Gene3D G3DSA:1.20.59.10 10 97 1.4E-17 T 14-09-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 AY555_RS02715 bbe3a6437e109e3a2016bebfe80cf23b 201 Pfam PF10076 Uncharacterised protein conserved in bacteria (DUF2313) 23 198 9.9E-26 T 14-09-2016 IPR018755 Bacteriophage Mu, Gp48 AY555_RS02715 bbe3a6437e109e3a2016bebfe80cf23b 201 PANTHER PTHR40610 2 200 1.9E-17 T 14-09-2016 AY555_RS08095 38bcd7a5a7e942cab1b1a3afe27245c4 466 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 14-09-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AY555_RS08095 38bcd7a5a7e942cab1b1a3afe27245c4 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 326 2.5E-65 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS08095 38bcd7a5a7e942cab1b1a3afe27245c4 466 PANTHER PTHR22912 3 459 4.2E-204 T 14-09-2016 AY555_RS08095 38bcd7a5a7e942cab1b1a3afe27245c4 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 1.9E-38 T 14-09-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AY555_RS08095 38bcd7a5a7e942cab1b1a3afe27245c4 466 Gene3D G3DSA:3.30.390.30 333 465 6.7E-48 T 14-09-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AY555_RS08095 38bcd7a5a7e942cab1b1a3afe27245c4 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 1.3E-67 T 14-09-2016 AY555_RS08095 38bcd7a5a7e942cab1b1a3afe27245c4 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 140 149 1.3E-67 T 14-09-2016 AY555_RS08095 38bcd7a5a7e942cab1b1a3afe27245c4 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.3E-67 T 14-09-2016 AY555_RS08095 38bcd7a5a7e942cab1b1a3afe27245c4 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 1.3E-67 T 14-09-2016 AY555_RS08095 38bcd7a5a7e942cab1b1a3afe27245c4 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 176 201 1.3E-67 T 14-09-2016 AY555_RS08095 38bcd7a5a7e942cab1b1a3afe27245c4 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 264 278 1.3E-67 T 14-09-2016 AY555_RS08095 38bcd7a5a7e942cab1b1a3afe27245c4 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 1.3E-67 T 14-09-2016 AY555_RS08095 38bcd7a5a7e942cab1b1a3afe27245c4 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 1.3E-67 T 14-09-2016 AY555_RS08095 38bcd7a5a7e942cab1b1a3afe27245c4 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 1.3E-67 T 14-09-2016 AY555_RS08095 38bcd7a5a7e942cab1b1a3afe27245c4 466 Gene3D G3DSA:3.50.50.60 5 145 4.5E-44 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS08095 38bcd7a5a7e942cab1b1a3afe27245c4 466 Gene3D G3DSA:3.50.50.60 146 332 8.0E-48 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS08095 38bcd7a5a7e942cab1b1a3afe27245c4 466 SUPERFAMILY SSF51905 1 335 6.11E-65 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS08095 38bcd7a5a7e942cab1b1a3afe27245c4 466 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 6 466 1.7E-175 T 14-09-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 AY555_RS08095 38bcd7a5a7e942cab1b1a3afe27245c4 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 3.2E-37 T 14-09-2016 AY555_RS08095 38bcd7a5a7e942cab1b1a3afe27245c4 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 176 194 3.2E-37 T 14-09-2016 AY555_RS08095 38bcd7a5a7e942cab1b1a3afe27245c4 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 3.2E-37 T 14-09-2016 AY555_RS08095 38bcd7a5a7e942cab1b1a3afe27245c4 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 137 155 3.2E-37 T 14-09-2016 AY555_RS08095 38bcd7a5a7e942cab1b1a3afe27245c4 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 279 3.2E-37 T 14-09-2016 AY555_RS08095 38bcd7a5a7e942cab1b1a3afe27245c4 466 PIRSF PIRSF000350 1 458 2.3E-80 T 14-09-2016 AY555_RS08095 38bcd7a5a7e942cab1b1a3afe27245c4 466 PANTHER PTHR22912:SF125 3 459 4.2E-204 T 14-09-2016 AY555_RS08095 38bcd7a5a7e942cab1b1a3afe27245c4 466 SUPERFAMILY SSF55424 343 465 1.72E-40 T 14-09-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AY555_RS08900 2ae7186243a9f29a5c0a70cf91888a12 510 Gene3D G3DSA:3.60.120.10 18 499 1.1E-160 T 14-09-2016 IPR005801 ADC synthase GO:0009058 AY555_RS08900 2ae7186243a9f29a5c0a70cf91888a12 510 PRINTS PR00095 Anthranilate synthase component I signature 428 442 6.9E-18 T 14-09-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AY555_RS08900 2ae7186243a9f29a5c0a70cf91888a12 510 PRINTS PR00095 Anthranilate synthase component I signature 348 361 6.9E-18 T 14-09-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AY555_RS08900 2ae7186243a9f29a5c0a70cf91888a12 510 PRINTS PR00095 Anthranilate synthase component I signature 443 457 6.9E-18 T 14-09-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AY555_RS08900 2ae7186243a9f29a5c0a70cf91888a12 510 PRINTS PR00095 Anthranilate synthase component I signature 334 347 6.9E-18 T 14-09-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AY555_RS08900 2ae7186243a9f29a5c0a70cf91888a12 510 SUPERFAMILY SSF56322 19 494 2.62E-146 T 14-09-2016 IPR005801 ADC synthase GO:0009058 AY555_RS08900 2ae7186243a9f29a5c0a70cf91888a12 510 PANTHER PTHR11236 1 510 8.1E-209 T 14-09-2016 AY555_RS08900 2ae7186243a9f29a5c0a70cf91888a12 510 Pfam PF00425 chorismate binding enzyme 233 486 1.3E-96 T 14-09-2016 IPR015890 Chorismate-utilising enzyme, C-terminal AY555_RS08900 2ae7186243a9f29a5c0a70cf91888a12 510 PANTHER PTHR11236:SF9 1 510 8.1E-209 T 14-09-2016 AY555_RS08900 2ae7186243a9f29a5c0a70cf91888a12 510 Pfam PF04715 Anthranilate synthase component I, N terminal region 29 173 1.1E-24 T 14-09-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AY555_RS08900 2ae7186243a9f29a5c0a70cf91888a12 510 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 29 494 4.2E-164 T 14-09-2016 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AY555_RS04265 d03a740801cbc98600d3a703902b9527 241 SUPERFAMILY SSF53850 5 240 4.55E-69 T 14-09-2016 AY555_RS04265 d03a740801cbc98600d3a703902b9527 241 PANTHER PTHR18966:SF152 1 237 1.4E-69 T 14-09-2016 AY555_RS04265 d03a740801cbc98600d3a703902b9527 241 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 41 54 - T 14-09-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AY555_RS04265 d03a740801cbc98600d3a703902b9527 241 PANTHER PTHR18966 1 237 1.4E-69 T 14-09-2016 AY555_RS04265 d03a740801cbc98600d3a703902b9527 241 Gene3D G3DSA:3.40.190.10 197 237 4.9E-44 T 14-09-2016 AY555_RS04265 d03a740801cbc98600d3a703902b9527 241 Gene3D G3DSA:3.40.190.10 16 101 4.9E-44 T 14-09-2016 AY555_RS04265 d03a740801cbc98600d3a703902b9527 241 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 19 236 4.6E-61 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AY555_RS04265 d03a740801cbc98600d3a703902b9527 241 SMART SM00062 18 239 8.4E-57 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AY555_RS04265 d03a740801cbc98600d3a703902b9527 241 Gene3D G3DSA:3.40.190.10 118 196 3.5E-17 T 14-09-2016 AY555_RS01825 39131c65c2e4857cb5fff386f3f8e015 427 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 34 213 1.6E-53 T 14-09-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 AY555_RS01825 39131c65c2e4857cb5fff386f3f8e015 427 PANTHER PTHR23417 135 145 1.7E-86 T 14-09-2016 AY555_RS01825 39131c65c2e4857cb5fff386f3f8e015 427 PANTHER PTHR23417 195 421 1.7E-86 T 14-09-2016 AY555_RS01825 39131c65c2e4857cb5fff386f3f8e015 427 PANTHER PTHR23417 4 116 1.7E-86 T 14-09-2016 AY555_RS01825 39131c65c2e4857cb5fff386f3f8e015 427 PANTHER PTHR23417:SF2 4 116 1.7E-86 T 14-09-2016 AY555_RS01825 39131c65c2e4857cb5fff386f3f8e015 427 PANTHER PTHR23417:SF2 135 145 1.7E-86 T 14-09-2016 AY555_RS01825 39131c65c2e4857cb5fff386f3f8e015 427 PANTHER PTHR23417:SF2 195 421 1.7E-86 T 14-09-2016 AY555_RS06035 6e77d961eae36b396b766abd20ba038b 311 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 104 276 3.3E-45 T 14-09-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AY555_RS06035 6e77d961eae36b396b766abd20ba038b 311 PANTHER PTHR10996 44 306 5.5E-77 T 14-09-2016 AY555_RS06035 6e77d961eae36b396b766abd20ba038b 311 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 215 231 - T 14-09-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AY555_RS06035 6e77d961eae36b396b766abd20ba038b 311 PANTHER PTHR10996:SF114 44 306 5.5E-77 T 14-09-2016 AY555_RS06035 6e77d961eae36b396b766abd20ba038b 311 SUPERFAMILY SSF51735 97 277 4.78E-46 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS06035 6e77d961eae36b396b766abd20ba038b 311 Gene3D G3DSA:3.40.50.720 95 276 4.3E-50 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS02195 a3d126bd63ac051151295782baf9ee6f 860 Pfam PF02355 Protein export membrane protein 348 516 2.0E-17 T 14-09-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AY555_RS02195 a3d126bd63ac051151295782baf9ee6f 860 Pfam PF02355 Protein export membrane protein 648 824 1.3E-61 T 14-09-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AY555_RS02195 a3d126bd63ac051151295782baf9ee6f 860 Pfam PF07549 SecD/SecF GG Motif 37 59 9.5E-4 T 14-09-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AY555_RS02195 a3d126bd63ac051151295782baf9ee6f 860 Pfam PF07549 SecD/SecF GG Motif 562 584 4.4E-8 T 14-09-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AY555_RS02195 a3d126bd63ac051151295782baf9ee6f 860 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 540 826 26.965 T 14-09-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AY555_RS02195 a3d126bd63ac051151295782baf9ee6f 860 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 5 529 41.675 T 14-09-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AY555_RS02195 a3d126bd63ac051151295782baf9ee6f 860 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 44 513 3.5E-137 T 14-09-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AY555_RS02195 a3d126bd63ac051151295782baf9ee6f 860 PANTHER PTHR30081 33 94 1.6E-134 T 14-09-2016 AY555_RS02195 a3d126bd63ac051151295782baf9ee6f 860 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 568 815 3.0E-71 T 14-09-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AY555_RS02195 a3d126bd63ac051151295782baf9ee6f 860 PANTHER PTHR30081 243 548 1.6E-134 T 14-09-2016 AY555_RS02195 a3d126bd63ac051151295782baf9ee6f 860 PANTHER PTHR30081 153 211 1.6E-134 T 14-09-2016 AY555_RS02195 a3d126bd63ac051151295782baf9ee6f 860 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 651 812 2.6E-49 T 14-09-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AY555_RS02195 a3d126bd63ac051151295782baf9ee6f 860 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 277 506 5.0E-78 T 14-09-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AY555_RS02195 a3d126bd63ac051151295782baf9ee6f 860 SUPERFAMILY SSF82866 601 825 1.01E-40 T 14-09-2016 AY555_RS02195 a3d126bd63ac051151295782baf9ee6f 860 Gene3D G3DSA:1.20.1640.10 330 523 1.6E-28 T 14-09-2016 AY555_RS02195 a3d126bd63ac051151295782baf9ee6f 860 Gene3D G3DSA:1.20.1640.10 631 832 2.0E-31 T 14-09-2016 AY555_RS02195 a3d126bd63ac051151295782baf9ee6f 860 PANTHER PTHR30081:SF1 33 94 1.6E-134 T 14-09-2016 AY555_RS02195 a3d126bd63ac051151295782baf9ee6f 860 PRINTS PR01755 Bacterial translocase SecF protein signature 567 582 9.4E-30 T 14-09-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AY555_RS02195 a3d126bd63ac051151295782baf9ee6f 860 PRINTS PR01755 Bacterial translocase SecF protein signature 763 778 9.4E-30 T 14-09-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AY555_RS02195 a3d126bd63ac051151295782baf9ee6f 860 PRINTS PR01755 Bacterial translocase SecF protein signature 683 697 9.4E-30 T 14-09-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AY555_RS02195 a3d126bd63ac051151295782baf9ee6f 860 PRINTS PR01755 Bacterial translocase SecF protein signature 731 749 9.4E-30 T 14-09-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AY555_RS02195 a3d126bd63ac051151295782baf9ee6f 860 SUPERFAMILY SSF82866 323 520 1.44E-40 T 14-09-2016 AY555_RS02195 a3d126bd63ac051151295782baf9ee6f 860 PANTHER PTHR30081:SF1 243 548 1.6E-134 T 14-09-2016 AY555_RS02195 a3d126bd63ac051151295782baf9ee6f 860 PANTHER PTHR30081:SF1 153 211 1.6E-134 T 14-09-2016 AY555_RS05370 530ff8e8de53dc5bfc394ee6c592c0ce 548 Pfam PF00342 Phosphoglucose isomerase 49 538 2.3E-224 T 14-09-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AY555_RS05370 530ff8e8de53dc5bfc394ee6c592c0ce 548 PANTHER PTHR11469 1 548 0.0 T 14-09-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AY555_RS05370 530ff8e8de53dc5bfc394ee6c592c0ce 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 462 480 8.9E-57 T 14-09-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AY555_RS05370 530ff8e8de53dc5bfc394ee6c592c0ce 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 147 166 8.9E-57 T 14-09-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AY555_RS05370 530ff8e8de53dc5bfc394ee6c592c0ce 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 258 276 8.9E-57 T 14-09-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AY555_RS05370 530ff8e8de53dc5bfc394ee6c592c0ce 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 494 507 8.9E-57 T 14-09-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AY555_RS05370 530ff8e8de53dc5bfc394ee6c592c0ce 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 335 356 8.9E-57 T 14-09-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AY555_RS05370 530ff8e8de53dc5bfc394ee6c592c0ce 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 480 494 8.9E-57 T 14-09-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AY555_RS05370 530ff8e8de53dc5bfc394ee6c592c0ce 548 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 494 511 - T 14-09-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AY555_RS05370 530ff8e8de53dc5bfc394ee6c592c0ce 548 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 43 521 41.351 T 14-09-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AY555_RS05370 530ff8e8de53dc5bfc394ee6c592c0ce 548 SUPERFAMILY SSF53697 6 545 4.45E-213 T 14-09-2016 AY555_RS05370 530ff8e8de53dc5bfc394ee6c592c0ce 548 PANTHER PTHR11469:SF4 1 548 0.0 T 14-09-2016 AY555_RS05370 530ff8e8de53dc5bfc394ee6c592c0ce 548 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 262 275 - T 14-09-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AY555_RS05370 530ff8e8de53dc5bfc394ee6c592c0ce 548 Gene3D G3DSA:1.10.1390.10 499 545 1.9E-22 T 14-09-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AY555_RS05370 530ff8e8de53dc5bfc394ee6c592c0ce 548 Gene3D G3DSA:3.40.50.10490 9 99 1.2E-157 T 14-09-2016 AY555_RS05370 530ff8e8de53dc5bfc394ee6c592c0ce 548 Gene3D G3DSA:3.40.50.10490 144 182 1.2E-157 T 14-09-2016 AY555_RS05370 530ff8e8de53dc5bfc394ee6c592c0ce 548 Gene3D G3DSA:3.40.50.10490 260 498 1.2E-157 T 14-09-2016 AY555_RS05910 5612a67ab3d612b5cbb2926e7621f019 294 SUPERFAMILY SSF49493 199 274 3.92E-17 T 14-09-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AY555_RS05910 5612a67ab3d612b5cbb2926e7621f019 294 ProSitePatterns PS00636 Nt-dnaJ domain signature. 45 64 - T 14-09-2016 IPR018253 DnaJ domain, conserved site AY555_RS05910 5612a67ab3d612b5cbb2926e7621f019 294 Gene3D G3DSA:1.10.287.110 2 73 1.6E-23 T 14-09-2016 IPR001623 DnaJ domain AY555_RS05910 5612a67ab3d612b5cbb2926e7621f019 294 SUPERFAMILY SSF49493 123 206 1.1E-19 T 14-09-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AY555_RS05910 5612a67ab3d612b5cbb2926e7621f019 294 PANTHER PTHR24078 5 67 1.7E-63 T 14-09-2016 AY555_RS05910 5612a67ab3d612b5cbb2926e7621f019 294 PANTHER PTHR24078 86 272 1.7E-63 T 14-09-2016 AY555_RS05910 5612a67ab3d612b5cbb2926e7621f019 294 SMART SM00271 2 60 5.4E-20 T 14-09-2016 IPR001623 DnaJ domain AY555_RS05910 5612a67ab3d612b5cbb2926e7621f019 294 PANTHER PTHR24078:SF190 5 67 1.7E-63 T 14-09-2016 AY555_RS05910 5612a67ab3d612b5cbb2926e7621f019 294 PANTHER PTHR24078:SF190 86 272 1.7E-63 T 14-09-2016 AY555_RS05910 5612a67ab3d612b5cbb2926e7621f019 294 PRINTS PR00625 DnaJ domain signature 5 23 2.0E-16 T 14-09-2016 IPR001623 DnaJ domain AY555_RS05910 5612a67ab3d612b5cbb2926e7621f019 294 PRINTS PR00625 DnaJ domain signature 23 38 2.0E-16 T 14-09-2016 IPR001623 DnaJ domain AY555_RS05910 5612a67ab3d612b5cbb2926e7621f019 294 PRINTS PR00625 DnaJ domain signature 40 60 2.0E-16 T 14-09-2016 IPR001623 DnaJ domain AY555_RS05910 5612a67ab3d612b5cbb2926e7621f019 294 Pfam PF01556 DnaJ C terminal domain 128 272 1.4E-29 T 14-09-2016 IPR002939 Chaperone DnaJ, C-terminal AY555_RS05910 5612a67ab3d612b5cbb2926e7621f019 294 Gene3D G3DSA:2.60.260.20 196 271 5.6E-16 T 14-09-2016 AY555_RS05910 5612a67ab3d612b5cbb2926e7621f019 294 Gene3D G3DSA:2.60.260.20 121 194 1.0E-17 T 14-09-2016 AY555_RS05910 5612a67ab3d612b5cbb2926e7621f019 294 SUPERFAMILY SSF46565 1 71 4.06E-23 T 14-09-2016 IPR001623 DnaJ domain AY555_RS05910 5612a67ab3d612b5cbb2926e7621f019 294 Pfam PF00226 DnaJ domain 3 65 9.9E-21 T 14-09-2016 IPR001623 DnaJ domain AY555_RS01985 82bf238b0e6c498c5467e58c418358c6 399 PANTHER PTHR11063 1 385 3.8E-111 T 14-09-2016 AY555_RS01985 82bf238b0e6c498c5467e58c418358c6 399 TIGRFAM TIGR01027 proB: glutamate 5-kinase 21 382 2.2E-123 T 14-09-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AY555_RS01985 82bf238b0e6c498c5467e58c418358c6 399 PRINTS PR00474 Glutamate 5-kinase family signature 133 154 1.7E-50 T 14-09-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AY555_RS01985 82bf238b0e6c498c5467e58c418358c6 399 PRINTS PR00474 Glutamate 5-kinase family signature 59 73 1.7E-50 T 14-09-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AY555_RS01985 82bf238b0e6c498c5467e58c418358c6 399 PRINTS PR00474 Glutamate 5-kinase family signature 165 192 1.7E-50 T 14-09-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AY555_RS01985 82bf238b0e6c498c5467e58c418358c6 399 PRINTS PR00474 Glutamate 5-kinase family signature 226 246 1.7E-50 T 14-09-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AY555_RS01985 82bf238b0e6c498c5467e58c418358c6 399 PRINTS PR00474 Glutamate 5-kinase family signature 93 121 1.7E-50 T 14-09-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AY555_RS01985 82bf238b0e6c498c5467e58c418358c6 399 Gene3D G3DSA:3.40.1160.10 21 262 8.1E-55 T 14-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AY555_RS01985 82bf238b0e6c498c5467e58c418358c6 399 SUPERFAMILY SSF53633 21 271 9.43E-68 T 14-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AY555_RS01985 82bf238b0e6c498c5467e58c418358c6 399 Hamap MF_00456 Glutamate 5-kinase [proB]. 21 274 35.842 T 14-09-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AY555_RS01985 82bf238b0e6c498c5467e58c418358c6 399 Pfam PF00696 Amino acid kinase family 22 252 6.5E-44 T 14-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AY555_RS01985 82bf238b0e6c498c5467e58c418358c6 399 SUPERFAMILY SSF88697 292 382 6.08E-25 T 14-09-2016 IPR015947 PUA-like domain AY555_RS01985 82bf238b0e6c498c5467e58c418358c6 399 PANTHER PTHR11063:SF12 1 385 3.8E-111 T 14-09-2016 AY555_RS01985 82bf238b0e6c498c5467e58c418358c6 399 Gene3D G3DSA:2.30.130.10 291 381 3.1E-26 T 14-09-2016 IPR015947 PUA-like domain AY555_RS01985 82bf238b0e6c498c5467e58c418358c6 399 Pfam PF01472 PUA domain 295 366 1.7E-22 T 14-09-2016 IPR002478 PUA domain GO:0003723 AY555_RS01985 82bf238b0e6c498c5467e58c418358c6 399 PIRSF PIRSF000729 16 384 4.3E-124 T 14-09-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AY555_RS01985 82bf238b0e6c498c5467e58c418358c6 399 SMART SM00359 293 375 5.2E-18 T 14-09-2016 IPR002478 PUA domain GO:0003723 AY555_RS05930 4da0884e3a05bcc2163fca8ccc210e87 731 SUPERFAMILY SSF47384 482 564 9.81E-16 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS05930 4da0884e3a05bcc2163fca8ccc210e87 731 SUPERFAMILY SSF55874 568 718 2.37E-11 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS05930 4da0884e3a05bcc2163fca8ccc210e87 731 Pfam PF00512 His Kinase A (phospho-acceptor) domain 497 563 8.0E-8 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS05930 4da0884e3a05bcc2163fca8ccc210e87 731 SUPERFAMILY SSF55785 353 474 1.28E-8 T 14-09-2016 IPR000014 PAS domain AY555_RS05930 4da0884e3a05bcc2163fca8ccc210e87 731 Gene3D G3DSA:3.30.450.20 354 474 1.4E-7 T 14-09-2016 AY555_RS05930 4da0884e3a05bcc2163fca8ccc210e87 731 Pfam PF00989 PAS fold 367 457 9.4E-6 T 14-09-2016 IPR013767 PAS fold GO:0006355 AY555_RS05930 4da0884e3a05bcc2163fca8ccc210e87 731 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 613 719 3.5E-5 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS05930 4da0884e3a05bcc2163fca8ccc210e87 731 PANTHER PTHR24423 363 652 1.3E-31 T 14-09-2016 AY555_RS05930 4da0884e3a05bcc2163fca8ccc210e87 731 PANTHER PTHR24423 1 24 1.3E-31 T 14-09-2016 AY555_RS05930 4da0884e3a05bcc2163fca8ccc210e87 731 PANTHER PTHR24423 170 189 1.3E-31 T 14-09-2016 AY555_RS05930 4da0884e3a05bcc2163fca8ccc210e87 731 PANTHER PTHR24423 678 698 1.3E-31 T 14-09-2016 AY555_RS05930 4da0884e3a05bcc2163fca8ccc210e87 731 Gene3D G3DSA:1.10.287.130 488 550 2.0E-10 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS05930 4da0884e3a05bcc2163fca8ccc210e87 731 SMART SM00388 496 564 1.1E-7 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS05930 4da0884e3a05bcc2163fca8ccc210e87 731 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 366 483 3.1E-6 T 14-09-2016 IPR000014 PAS domain AY555_RS05930 4da0884e3a05bcc2163fca8ccc210e87 731 Gene3D G3DSA:3.30.565.10 551 719 4.2E-9 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS01430 574d8c7467f568b3d053006cf96f6b02 333 Pfam PF02445 Quinolinate synthetase A protein 34 329 1.1E-107 T 14-09-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 AY555_RS01430 574d8c7467f568b3d053006cf96f6b02 333 PANTHER PTHR30573 3 333 7.5E-124 T 14-09-2016 AY555_RS01430 574d8c7467f568b3d053006cf96f6b02 333 Gene3D G3DSA:3.20.20.70 50 162 2.7E-4 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS01430 574d8c7467f568b3d053006cf96f6b02 333 SUPERFAMILY SSF142754 31 329 4.32E-103 T 14-09-2016 AY555_RS01430 574d8c7467f568b3d053006cf96f6b02 333 PANTHER PTHR30573:SF0 3 333 7.5E-124 T 14-09-2016 AY555_RS01430 574d8c7467f568b3d053006cf96f6b02 333 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 33 330 4.8E-91 T 14-09-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 AY555_RS06425 dd70f868fe72e80fc9e1a0add8ee7327 205 Pfam PF10991 Protein of unknown function (DUF2815) 7 181 9.4E-33 T 14-09-2016 IPR022595 Protein of unknown function DUF2815 AY555_RS06425 dd70f868fe72e80fc9e1a0add8ee7327 205 SUPERFAMILY SSF50249 18 187 1.88E-9 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS09380 d97136e0949ea0494db80c8886c5ed00 313 Pfam PF00448 SRP54-type protein, GTPase domain 127 284 4.8E-23 T 14-09-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 AY555_RS09380 d97136e0949ea0494db80c8886c5ed00 313 SMART SM00382 123 273 2.0E-5 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS09380 d97136e0949ea0494db80c8886c5ed00 313 PANTHER PTHR11564 127 285 2.9E-29 T 14-09-2016 AY555_RS09380 d97136e0949ea0494db80c8886c5ed00 313 Gene3D G3DSA:3.40.50.300 118 310 1.3E-28 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS09380 d97136e0949ea0494db80c8886c5ed00 313 SMART SM00962 124 313 1.9E-14 T 14-09-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 AY555_RS09380 d97136e0949ea0494db80c8886c5ed00 313 SUPERFAMILY SSF52540 123 282 1.31E-19 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS09380 d97136e0949ea0494db80c8886c5ed00 313 PANTHER PTHR11564:SF3 127 285 2.9E-29 T 14-09-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 AY555_RS06655 f95c630f1be0b6bfcf11d011db88606c 72 Gene3D G3DSA:2.40.50.140 1 72 6.7E-37 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS06655 f95c630f1be0b6bfcf11d011db88606c 72 SUPERFAMILY SSF50249 1 71 1.06E-26 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS06655 f95c630f1be0b6bfcf11d011db88606c 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 5.0E-33 T 14-09-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AY555_RS06655 f95c630f1be0b6bfcf11d011db88606c 72 Pfam PF01176 Translation initiation factor 1A / IF-1 8 70 1.4E-26 T 14-09-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 AY555_RS06655 f95c630f1be0b6bfcf11d011db88606c 72 SMART SM00316 4 72 4.0E-5 T 14-09-2016 IPR022967 RNA-binding domain, S1 AY555_RS06655 f95c630f1be0b6bfcf11d011db88606c 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 25.545 T 14-09-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AY555_RS06655 f95c630f1be0b6bfcf11d011db88606c 72 PANTHER PTHR33370 1 72 1.4E-39 T 14-09-2016 AY555_RS00395 0071726a55f316ddad38321238950683 701 SUPERFAMILY SSF75138 213 336 3.49E-14 T 14-09-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like AY555_RS00395 0071726a55f316ddad38321238950683 701 PANTHER PTHR23406:SF3 161 694 1.9E-53 T 14-09-2016 AY555_RS00395 0071726a55f316ddad38321238950683 701 PANTHER PTHR23406 161 694 1.9E-53 T 14-09-2016 AY555_RS00395 0071726a55f316ddad38321238950683 701 SUPERFAMILY SSF53659 375 692 2.06E-95 T 14-09-2016 AY555_RS00395 0071726a55f316ddad38321238950683 701 Pfam PF07085 DRTGG domain 217 328 4.2E-19 T 14-09-2016 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 AY555_RS00395 0071726a55f316ddad38321238950683 701 Gene3D G3DSA:3.40.50.300 4 212 5.5E-13 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS00395 0071726a55f316ddad38321238950683 701 SUPERFAMILY SSF52540 1 222 3.19E-21 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS00395 0071726a55f316ddad38321238950683 701 PIRSF PIRSF006107 2 696 9.9E-292 T 14-09-2016 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 AY555_RS00395 0071726a55f316ddad38321238950683 701 Gene3D G3DSA:3.40.50.10750 506 665 6.8E-67 T 14-09-2016 AY555_RS00395 0071726a55f316ddad38321238950683 701 Gene3D G3DSA:3.40.1390.20 213 349 2.0E-17 T 14-09-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like AY555_RS00395 0071726a55f316ddad38321238950683 701 Pfam PF01515 Phosphate acetyl/butaryl transferase 374 689 9.4E-123 T 14-09-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 AY555_RS00395 0071726a55f316ddad38321238950683 701 Pfam PF13500 AAA domain 4 213 3.7E-24 T 14-09-2016 AY555_RS00395 0071726a55f316ddad38321238950683 701 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 389 689 3.5E-128 T 14-09-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 AY555_RS08910 90b08d684cd5c7e1b266c167e7352c79 431 PANTHER PTHR30105 198 428 1.7E-75 T 14-09-2016 AY555_RS08910 90b08d684cd5c7e1b266c167e7352c79 431 Pfam PF04748 Divergent polysaccharide deacetylase 200 410 3.7E-77 T 14-09-2016 IPR006837 Protein of unknown function DUF610, YibQ AY555_RS08910 90b08d684cd5c7e1b266c167e7352c79 431 SUPERFAMILY SSF88713 198 411 4.45E-70 T 14-09-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AY555_RS08910 90b08d684cd5c7e1b266c167e7352c79 431 Gene3D G3DSA:3.20.20.370 190 414 2.1E-83 T 14-09-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AY555_RS02220 7a769261836c7f22f37913e03b82b21b 216 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 12 216 6.1E-75 T 14-09-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 AY555_RS02220 7a769261836c7f22f37913e03b82b21b 216 Gene3D G3DSA:3.40.50.2020 9 216 9.1E-74 T 14-09-2016 IPR029057 Phosphoribosyltransferase-like AY555_RS02220 7a769261836c7f22f37913e03b82b21b 216 Pfam PF14681 Uracil phosphoribosyltransferase 13 215 2.1E-70 T 14-09-2016 IPR029057 Phosphoribosyltransferase-like AY555_RS02220 7a769261836c7f22f37913e03b82b21b 216 SUPERFAMILY SSF53271 10 214 8.78E-60 T 14-09-2016 IPR029057 Phosphoribosyltransferase-like AY555_RS02220 7a769261836c7f22f37913e03b82b21b 216 PANTHER PTHR10285 14 205 7.9E-79 T 14-09-2016 AY555_RS02220 7a769261836c7f22f37913e03b82b21b 216 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 9 216 42.405 T 14-09-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 AY555_RS06685 b677d8737b100c6be8ffb6ea0280e0c2 352 PANTHER PTHR30085 50 352 2.9E-142 T 14-09-2016 AY555_RS06685 b677d8737b100c6be8ffb6ea0280e0c2 352 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 142 238 6.4E-21 T 14-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AY555_RS06685 b677d8737b100c6be8ffb6ea0280e0c2 352 SUPERFAMILY SSF161098 140 335 8.24E-41 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS06685 b677d8737b100c6be8ffb6ea0280e0c2 352 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 160 346 2.3E-23 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS06685 b677d8737b100c6be8ffb6ea0280e0c2 352 PANTHER PTHR30085:SF3 50 352 2.9E-142 T 14-09-2016 AY555_RS06685 b677d8737b100c6be8ffb6ea0280e0c2 352 Gene3D G3DSA:1.10.3720.10 142 347 3.6E-45 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS08320 f81442dea56fa4239d90a546522b693f 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 90 106 1.1E-21 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AY555_RS08320 f81442dea56fa4239d90a546522b693f 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 175 196 1.1E-21 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AY555_RS08320 f81442dea56fa4239d90a546522b693f 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 206 230 1.1E-21 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AY555_RS08320 f81442dea56fa4239d90a546522b693f 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 63 79 1.1E-21 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AY555_RS08320 f81442dea56fa4239d90a546522b693f 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 41 61 1.1E-21 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AY555_RS08320 f81442dea56fa4239d90a546522b693f 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 139 162 1.1E-21 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AY555_RS08320 f81442dea56fa4239d90a546522b693f 263 Gene3D G3DSA:3.30.540.10 15 156 9.2E-34 T 14-09-2016 AY555_RS08320 f81442dea56fa4239d90a546522b693f 263 Pfam PF00459 Inositol monophosphatase family 16 259 3.1E-42 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AY555_RS08320 f81442dea56fa4239d90a546522b693f 263 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 90 103 - T 14-09-2016 IPR020583 Inositol monophosphatase, metal-binding site AY555_RS08320 f81442dea56fa4239d90a546522b693f 263 PANTHER PTHR20854 32 259 2.1E-40 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AY555_RS08320 f81442dea56fa4239d90a546522b693f 263 Gene3D G3DSA:3.40.190.80 172 259 1.9E-16 T 14-09-2016 AY555_RS08320 f81442dea56fa4239d90a546522b693f 263 SUPERFAMILY SSF56655 15 259 5.89E-58 T 14-09-2016 AY555_RS07545 c16a84ccb1445e7e7cd5bab32d8c398a 273 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 9 262 7.0E-90 T 14-09-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AY555_RS07545 c16a84ccb1445e7e7cd5bab32d8c398a 273 Pfam PF08543 Phosphomethylpyrimidine kinase 16 261 1.1E-88 T 14-09-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 AY555_RS07545 c16a84ccb1445e7e7cd5bab32d8c398a 273 PANTHER PTHR20858 5 272 2.2E-111 T 14-09-2016 AY555_RS07545 c16a84ccb1445e7e7cd5bab32d8c398a 273 PANTHER PTHR20858:SF17 5 272 2.2E-111 T 14-09-2016 AY555_RS07545 c16a84ccb1445e7e7cd5bab32d8c398a 273 Gene3D G3DSA:3.40.1190.20 8 263 1.0E-96 T 14-09-2016 IPR029056 Ribokinase-like AY555_RS07545 c16a84ccb1445e7e7cd5bab32d8c398a 273 SUPERFAMILY SSF53613 6 265 1.71E-79 T 14-09-2016 IPR029056 Ribokinase-like AY555_RS07120 386d5034418436d5a9db61882e29fcb0 423 PANTHER PTHR10590 5 420 6.0E-178 T 14-09-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 AY555_RS07120 386d5034418436d5a9db61882e29fcb0 423 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 1.5E-22 T 14-09-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 AY555_RS07120 386d5034418436d5a9db61882e29fcb0 423 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 6 420 1.2E-138 T 14-09-2016 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 AY555_RS07120 386d5034418436d5a9db61882e29fcb0 423 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 420 3.6E-69 T 14-09-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 AY555_RS04355 7ca25f445664622638f25ba75f32b53c 262 PANTHER PTHR30269 9 254 1.8E-65 T 14-09-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 AY555_RS04355 7ca25f445664622638f25ba75f32b53c 262 Pfam PF01925 Sulfite exporter TauE/SafE 17 250 1.5E-31 T 14-09-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 AY555_RS04355 7ca25f445664622638f25ba75f32b53c 262 PANTHER PTHR30269:SF0 9 254 1.8E-65 T 14-09-2016 AY555_RS04435 c3695bddeb40df8bbaf602b68b0cddb9 90 SUPERFAMILY SSF46992 4 86 9.81E-29 T 14-09-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS04435 c3695bddeb40df8bbaf602b68b0cddb9 90 Pfam PF01649 Ribosomal protein S20 2 84 1.8E-26 T 14-09-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS04435 c3695bddeb40df8bbaf602b68b0cddb9 90 PANTHER PTHR33398 1 90 4.4E-30 T 14-09-2016 AY555_RS04435 c3695bddeb40df8bbaf602b68b0cddb9 90 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 2.1E-23 T 14-09-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS04435 c3695bddeb40df8bbaf602b68b0cddb9 90 Gene3D G3DSA:1.20.58.110 4 86 8.1E-29 T 14-09-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS04435 c3695bddeb40df8bbaf602b68b0cddb9 90 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.577 T 14-09-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS04435 c3695bddeb40df8bbaf602b68b0cddb9 90 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 25 86 2.0E-11 T 14-09-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00495 f71319fbbb1ed26d56882a475f224e42 737 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 22 732 16.532 T 14-09-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 AY555_RS00495 f71319fbbb1ed26d56882a475f224e42 737 Pfam PF04453 Organic solvent tolerance protein 306 669 2.4E-49 T 14-09-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 AY555_RS00495 f71319fbbb1ed26d56882a475f224e42 737 PANTHER PTHR30189 62 715 1.4E-30 T 14-09-2016 AY555_RS00495 f71319fbbb1ed26d56882a475f224e42 737 Gene3D G3DSA:2.60.450.10 59 212 1.1E-14 T 14-09-2016 AY555_RS00610 b7a68579ffaf458d5a3dbdde0c1e339f 87 PRINTS PR00160 Glutaredoxin signature 61 74 4.9E-18 T 14-09-2016 IPR014025 Glutaredoxin subgroup AY555_RS00610 b7a68579ffaf458d5a3dbdde0c1e339f 87 PRINTS PR00160 Glutaredoxin signature 47 60 4.9E-18 T 14-09-2016 IPR014025 Glutaredoxin subgroup AY555_RS00610 b7a68579ffaf458d5a3dbdde0c1e339f 87 PRINTS PR00160 Glutaredoxin signature 5 23 4.9E-18 T 14-09-2016 IPR014025 Glutaredoxin subgroup AY555_RS00610 b7a68579ffaf458d5a3dbdde0c1e339f 87 ProSitePatterns PS00195 Glutaredoxin active site. 7 23 - T 14-09-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 AY555_RS00610 b7a68579ffaf458d5a3dbdde0c1e339f 87 Pfam PF00462 Glutaredoxin 5 64 1.4E-26 T 14-09-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AY555_RS00610 b7a68579ffaf458d5a3dbdde0c1e339f 87 SUPERFAMILY SSF52833 5 85 6.77E-32 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS00610 b7a68579ffaf458d5a3dbdde0c1e339f 87 PANTHER PTHR10168 5 86 6.7E-33 T 14-09-2016 AY555_RS00610 b7a68579ffaf458d5a3dbdde0c1e339f 87 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 5 83 1.1E-36 T 14-09-2016 IPR011900 Glutaredoxin, GrxC GO:0045454 AY555_RS00610 b7a68579ffaf458d5a3dbdde0c1e339f 87 Gene3D G3DSA:3.40.30.10 5 86 4.2E-32 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS08035 7e1e061afbdd541dd40a1fcc0920e2b4 286 Pfam PF01618 MotA/TolQ/ExbB proton channel family 138 237 8.7E-10 T 14-09-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AY555_RS08035 7e1e061afbdd541dd40a1fcc0920e2b4 286 PANTHER PTHR30433:SF4 1 280 1.8E-121 T 14-09-2016 IPR022522 Flagellar motor stator, MotA AY555_RS08035 7e1e061afbdd541dd40a1fcc0920e2b4 286 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 14-09-2016 IPR000540 Flagellar motor protein MotA, conserved site AY555_RS08035 7e1e061afbdd541dd40a1fcc0920e2b4 286 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 281 2.1E-113 T 14-09-2016 IPR022522 Flagellar motor stator, MotA AY555_RS08035 7e1e061afbdd541dd40a1fcc0920e2b4 286 PANTHER PTHR30433 1 280 1.8E-121 T 14-09-2016 AY555_RS00240 b6706a72724300f138e8d93a57568c84 420 Pfam PF00999 Sodium/hydrogen exchanger family 11 371 1.4E-53 T 14-09-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AY555_RS00240 b6706a72724300f138e8d93a57568c84 420 PANTHER PTHR16254 1 370 2.4E-88 T 14-09-2016 AY555_RS00240 b6706a72724300f138e8d93a57568c84 420 PANTHER PTHR16254:SF14 1 370 2.4E-88 T 14-09-2016 AY555_RS07305 e029fee0aad86402bcca893ae3979c41 377 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 267 374 2.0E-15 T 14-09-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 AY555_RS07305 e029fee0aad86402bcca893ae3979c41 377 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 201 217 - T 14-09-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 AY555_RS07305 e029fee0aad86402bcca893ae3979c41 377 SUPERFAMILY SSF51419 22 261 7.27E-70 T 14-09-2016 IPR029066 PLP-binding barrel AY555_RS07305 e029fee0aad86402bcca893ae3979c41 377 PRINTS PR01182 Ornithine decarboxylase signature 116 138 3.3E-20 T 14-09-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 AY555_RS07305 e029fee0aad86402bcca893ae3979c41 377 PRINTS PR01182 Ornithine decarboxylase signature 319 329 3.3E-20 T 14-09-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 AY555_RS07305 e029fee0aad86402bcca893ae3979c41 377 PRINTS PR01182 Ornithine decarboxylase signature 86 110 3.3E-20 T 14-09-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 AY555_RS07305 e029fee0aad86402bcca893ae3979c41 377 PRINTS PR01182 Ornithine decarboxylase signature 42 69 3.3E-20 T 14-09-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 AY555_RS07305 e029fee0aad86402bcca893ae3979c41 377 PRINTS PR01182 Ornithine decarboxylase signature 16 40 3.3E-20 T 14-09-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 AY555_RS07305 e029fee0aad86402bcca893ae3979c41 377 Gene3D G3DSA:3.20.20.10 26 242 4.6E-70 T 14-09-2016 IPR029066 PLP-binding barrel AY555_RS07305 e029fee0aad86402bcca893ae3979c41 377 PANTHER PTHR11482 1 377 2.8E-126 T 14-09-2016 AY555_RS07305 e029fee0aad86402bcca893ae3979c41 377 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 30 259 6.4E-56 T 14-09-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 AY555_RS07305 e029fee0aad86402bcca893ae3979c41 377 PANTHER PTHR11482:SF6 1 377 2.8E-126 T 14-09-2016 AY555_RS07305 e029fee0aad86402bcca893ae3979c41 377 Gene3D G3DSA:2.40.37.10 243 377 1.6E-27 T 14-09-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 AY555_RS07305 e029fee0aad86402bcca893ae3979c41 377 SUPERFAMILY SSF50621 227 375 3.56E-34 T 14-09-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 AY555_RS07305 e029fee0aad86402bcca893ae3979c41 377 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 44 62 - T 14-09-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 AY555_RS07305 e029fee0aad86402bcca893ae3979c41 377 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 64 76 5.4E-18 T 14-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AY555_RS07305 e029fee0aad86402bcca893ae3979c41 377 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 249 268 5.4E-18 T 14-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AY555_RS07305 e029fee0aad86402bcca893ae3979c41 377 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 44 62 5.4E-18 T 14-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AY555_RS07305 e029fee0aad86402bcca893ae3979c41 377 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 166 179 5.4E-18 T 14-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AY555_RS06445 30ffa3952499a9c05d1a99006679bcc9 762 SUPERFAMILY SSF56672 209 360 1.42E-42 T 14-09-2016 AY555_RS06445 30ffa3952499a9c05d1a99006679bcc9 762 SUPERFAMILY SSF56672 554 621 1.42E-42 T 14-09-2016 AY555_RS06445 30ffa3952499a9c05d1a99006679bcc9 762 SUPERFAMILY SSF56672 406 511 1.42E-42 T 14-09-2016 AY555_RS06445 30ffa3952499a9c05d1a99006679bcc9 762 SUPERFAMILY SSF56672 672 744 1.42E-42 T 14-09-2016 AY555_RS06445 30ffa3952499a9c05d1a99006679bcc9 762 Gene3D G3DSA:1.10.150.20 554 616 2.1E-7 T 14-09-2016 AY555_RS06445 30ffa3952499a9c05d1a99006679bcc9 762 Gene3D G3DSA:1.10.150.20 430 511 2.1E-7 T 14-09-2016 AY555_RS06445 30ffa3952499a9c05d1a99006679bcc9 762 Pfam PF00476 DNA polymerase family A 283 486 8.1E-8 T 14-09-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AY555_RS06445 30ffa3952499a9c05d1a99006679bcc9 762 Gene3D G3DSA:3.30.70.370 411 429 1.3E-6 T 14-09-2016 AY555_RS06445 30ffa3952499a9c05d1a99006679bcc9 762 Gene3D G3DSA:3.30.70.370 671 726 1.3E-6 T 14-09-2016 AY555_RS06445 30ffa3952499a9c05d1a99006679bcc9 762 Gene3D G3DSA:3.30.70.370 333 376 1.3E-6 T 14-09-2016 AY555_RS06445 30ffa3952499a9c05d1a99006679bcc9 762 SMART SM00482 403 727 0.0019 T 14-09-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AY555_RS09475 919a645ac20c9a1cc77f4a6a308f5604 323 SUPERFAMILY SSF56655 2 313 5.68E-109 T 14-09-2016 AY555_RS09475 919a645ac20c9a1cc77f4a6a308f5604 323 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 310 3.6E-141 T 14-09-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AY555_RS09475 919a645ac20c9a1cc77f4a6a308f5604 323 PANTHER PTHR30447:SF0 1 323 2.2E-161 T 14-09-2016 AY555_RS09475 919a645ac20c9a1cc77f4a6a308f5604 323 PANTHER PTHR30447 1 323 2.2E-161 T 14-09-2016 AY555_RS09475 919a645ac20c9a1cc77f4a6a308f5604 323 Gene3D G3DSA:3.30.540.10 1 173 1.2E-64 T 14-09-2016 AY555_RS09475 919a645ac20c9a1cc77f4a6a308f5604 323 Gene3D G3DSA:3.30.540.10 174 315 7.6E-43 T 14-09-2016 AY555_RS09475 919a645ac20c9a1cc77f4a6a308f5604 323 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 2 315 4.4E-114 T 14-09-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AY555_RS09475 919a645ac20c9a1cc77f4a6a308f5604 323 PIRSF PIRSF004532 1 318 2.5E-140 T 14-09-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AY555_RS05870 06c7f2e69601ec9f7c5c33517779178c 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 188 4.1E-6 T 14-09-2016 AY555_RS05870 06c7f2e69601ec9f7c5c33517779178c 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.7E-14 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS05870 06c7f2e69601ec9f7c5c33517779178c 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.7E-14 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS05870 06c7f2e69601ec9f7c5c33517779178c 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.7E-14 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS05870 06c7f2e69601ec9f7c5c33517779178c 245 PANTHER PTHR24322 152 183 1.5E-55 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS05870 06c7f2e69601ec9f7c5c33517779178c 245 PANTHER PTHR24322 11 136 1.5E-55 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS05870 06c7f2e69601ec9f7c5c33517779178c 245 PANTHER PTHR24322:SF328 11 136 1.5E-55 T 14-09-2016 AY555_RS05870 06c7f2e69601ec9f7c5c33517779178c 245 PANTHER PTHR24322:SF328 152 183 1.5E-55 T 14-09-2016 AY555_RS05870 06c7f2e69601ec9f7c5c33517779178c 245 Gene3D G3DSA:3.40.50.720 1 244 1.9E-87 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS05870 06c7f2e69601ec9f7c5c33517779178c 245 SUPERFAMILY SSF51735 7 244 5.03E-83 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS05870 06c7f2e69601ec9f7c5c33517779178c 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 242 1.5E-64 T 14-09-2016 AY555_RS05870 06c7f2e69601ec9f7c5c33517779178c 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 14-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AY555_RS05870 06c7f2e69601ec9f7c5c33517779178c 245 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 243 5.7E-94 T 14-09-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 AY555_RS05870 06c7f2e69601ec9f7c5c33517779178c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.9E-46 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS05870 06c7f2e69601ec9f7c5c33517779178c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.9E-46 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS05870 06c7f2e69601ec9f7c5c33517779178c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.9E-46 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS05870 06c7f2e69601ec9f7c5c33517779178c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.9E-46 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS05870 06c7f2e69601ec9f7c5c33517779178c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 1.9E-46 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS05870 06c7f2e69601ec9f7c5c33517779178c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.9E-46 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS07595 540ddf98da88b445dc6708b095486c46 426 Pfam PF01458 Uncharacterized protein family (UPF0051) 173 396 2.8E-63 T 14-09-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 AY555_RS07595 540ddf98da88b445dc6708b095486c46 426 PANTHER PTHR30508 2 421 2.9E-112 T 14-09-2016 AY555_RS07595 540ddf98da88b445dc6708b095486c46 426 SUPERFAMILY SSF101960 4 421 2.88E-100 T 14-09-2016 AY555_RS07595 540ddf98da88b445dc6708b095486c46 426 PANTHER PTHR30508:SF0 2 421 2.9E-112 T 14-09-2016 AY555_RS07595 540ddf98da88b445dc6708b095486c46 426 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 138 409 1.1E-76 T 14-09-2016 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 AY555_RS01310 201d950aca51a611b0ca4ad946b531f1 207 PANTHER PTHR10681:SF22 11 202 6.6E-87 T 14-09-2016 AY555_RS01310 201d950aca51a611b0ca4ad946b531f1 207 Pfam PF00578 AhpC/TSA family 11 146 8.0E-32 T 14-09-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 AY555_RS01310 201d950aca51a611b0ca4ad946b531f1 207 PANTHER PTHR10681 11 202 6.6E-87 T 14-09-2016 AY555_RS01310 201d950aca51a611b0ca4ad946b531f1 207 PIRSF PIRSF000239 5 206 2.4E-58 T 14-09-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 AY555_RS01310 201d950aca51a611b0ca4ad946b531f1 207 SUPERFAMILY SSF52833 10 201 2.41E-61 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS01310 201d950aca51a611b0ca4ad946b531f1 207 Gene3D G3DSA:3.40.30.10 10 201 3.1E-69 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS01310 201d950aca51a611b0ca4ad946b531f1 207 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 167 201 1.2E-11 T 14-09-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AY555_RS03540 965a97175c796b9f656711a5fef37013 249 PIRSF PIRSF000090 1 249 2.9E-86 T 14-09-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 AY555_RS03540 965a97175c796b9f656711a5fef37013 249 SUPERFAMILY SSF52402 1 242 3.07E-87 T 14-09-2016 AY555_RS03540 965a97175c796b9f656711a5fef37013 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 14-09-2016 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 AY555_RS03540 965a97175c796b9f656711a5fef37013 249 Pfam PF01012 Electron transfer flavoprotein domain 29 206 7.3E-46 T 14-09-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 AY555_RS03540 965a97175c796b9f656711a5fef37013 249 Gene3D G3DSA:3.40.50.620 1 244 9.1E-106 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS03540 965a97175c796b9f656711a5fef37013 249 PANTHER PTHR21294 1 249 2.5E-154 T 14-09-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 AY555_RS03540 965a97175c796b9f656711a5fef37013 249 SMART SM00893 23 211 8.0E-69 T 14-09-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 AY555_RS03540 965a97175c796b9f656711a5fef37013 249 PANTHER PTHR21294:SF8 1 249 2.5E-154 T 14-09-2016 AY555_RS05185 45f025a38ecef84a33aec82ada244b23 393 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 105 142 - T 14-09-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AY555_RS05185 45f025a38ecef84a33aec82ada244b23 393 SUPERFAMILY SSF55031 186 287 1.06E-23 T 14-09-2016 IPR011650 Peptidase M20, dimerisation domain AY555_RS05185 45f025a38ecef84a33aec82ada244b23 393 Pfam PF01546 Peptidase family M20/M25/M40 70 380 2.9E-46 T 14-09-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AY555_RS05185 45f025a38ecef84a33aec82ada244b23 393 PANTHER PTHR11014 1 386 2.5E-80 T 14-09-2016 AY555_RS05185 45f025a38ecef84a33aec82ada244b23 393 SUPERFAMILY SSF53187 5 185 2.2E-65 T 14-09-2016 AY555_RS05185 45f025a38ecef84a33aec82ada244b23 393 SUPERFAMILY SSF53187 302 383 2.2E-65 T 14-09-2016 AY555_RS05185 45f025a38ecef84a33aec82ada244b23 393 Gene3D G3DSA:3.40.630.10 326 384 1.7E-72 T 14-09-2016 AY555_RS05185 45f025a38ecef84a33aec82ada244b23 393 Gene3D G3DSA:3.40.630.10 6 194 1.7E-72 T 14-09-2016 AY555_RS05185 45f025a38ecef84a33aec82ada244b23 393 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 10 381 1.0E-128 T 14-09-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 AY555_RS05185 45f025a38ecef84a33aec82ada244b23 393 Pfam PF07687 Peptidase dimerisation domain 182 287 3.1E-23 T 14-09-2016 IPR011650 Peptidase M20, dimerisation domain AY555_RS05185 45f025a38ecef84a33aec82ada244b23 393 Gene3D G3DSA:3.30.70.360 195 288 1.0E-26 T 14-09-2016 IPR011650 Peptidase M20, dimerisation domain AY555_RS05185 45f025a38ecef84a33aec82ada244b23 393 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 5 384 49.915 T 14-09-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 AY555_RS01320 b32be0e2e4a44f84e48a037ea56f6191 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.8E-8 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AY555_RS01320 b32be0e2e4a44f84e48a037ea56f6191 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.8E-8 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AY555_RS01320 b32be0e2e4a44f84e48a037ea56f6191 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.8E-8 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AY555_RS01320 b32be0e2e4a44f84e48a037ea56f6191 297 Pfam PF03466 LysR substrate binding domain 87 289 8.0E-40 T 14-09-2016 IPR005119 LysR, substrate-binding AY555_RS01320 b32be0e2e4a44f84e48a037ea56f6191 297 SUPERFAMILY SSF53850 89 291 1.55E-44 T 14-09-2016 AY555_RS01320 b32be0e2e4a44f84e48a037ea56f6191 297 SUPERFAMILY SSF46785 1 85 6.44E-24 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS01320 b32be0e2e4a44f84e48a037ea56f6191 297 Gene3D G3DSA:3.40.190.10 178 245 7.6E-7 T 14-09-2016 AY555_RS01320 b32be0e2e4a44f84e48a037ea56f6191 297 PANTHER PTHR30537 1 292 2.0E-90 T 14-09-2016 AY555_RS01320 b32be0e2e4a44f84e48a037ea56f6191 297 PANTHER PTHR30537:SF5 1 292 2.0E-90 T 14-09-2016 AY555_RS01320 b32be0e2e4a44f84e48a037ea56f6191 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.5E-21 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AY555_RS01320 b32be0e2e4a44f84e48a037ea56f6191 297 Gene3D G3DSA:3.40.190.10 91 177 1.4E-28 T 14-09-2016 AY555_RS01320 b32be0e2e4a44f84e48a037ea56f6191 297 Gene3D G3DSA:1.10.10.10 1 86 2.3E-27 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS09735 6e0b891a4bcba9fa062969dde8b43145 249 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 117 123 - T 14-09-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AY555_RS09735 6e0b891a4bcba9fa062969dde8b43145 249 SUPERFAMILY SSF53335 34 181 2.13E-28 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS09735 6e0b891a4bcba9fa062969dde8b43145 249 Gene3D G3DSA:3.40.50.150 30 237 1.1E-54 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS09735 6e0b891a4bcba9fa062969dde8b43145 249 Pfam PF13649 Methyltransferase domain 46 120 4.6E-9 T 14-09-2016 AY555_RS09735 6e0b891a4bcba9fa062969dde8b43145 249 PANTHER PTHR18895 45 233 3.3E-29 T 14-09-2016 AY555_RS09735 6e0b891a4bcba9fa062969dde8b43145 249 PANTHER PTHR18895:SF75 45 233 3.3E-29 T 14-09-2016 AY555_RS06525 9c0b4dd6fc752658c32ec4fa9288a274 112 PANTHER PTHR35862 1 95 2.5E-29 T 14-09-2016 AY555_RS06525 9c0b4dd6fc752658c32ec4fa9288a274 112 SUPERFAMILY SSF160719 9 105 5.89E-28 T 14-09-2016 AY555_RS06525 9c0b4dd6fc752658c32ec4fa9288a274 112 Pfam PF04965 Gene 25-like lysozyme 15 83 5.5E-15 T 14-09-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD AY555_RS06525 9c0b4dd6fc752658c32ec4fa9288a274 112 Gene3D G3DSA:3.10.450.40 6 106 4.5E-34 T 14-09-2016 AY555_RS06525 9c0b4dd6fc752658c32ec4fa9288a274 112 PANTHER PTHR35862:SF2 1 95 2.5E-29 T 14-09-2016 AY555_RS00530 017d0484df33da2439c0fd44b1963b75 251 Pfam PF00106 short chain dehydrogenase 10 185 4.0E-38 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS00530 017d0484df33da2439c0fd44b1963b75 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.5E-17 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS00530 017d0484df33da2439c0fd44b1963b75 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 1.5E-17 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS00530 017d0484df33da2439c0fd44b1963b75 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.5E-17 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS00530 017d0484df33da2439c0fd44b1963b75 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 1.5E-17 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS00530 017d0484df33da2439c0fd44b1963b75 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 1.5E-17 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS00530 017d0484df33da2439c0fd44b1963b75 251 PANTHER PTHR24322:SF363 12 131 3.7E-37 T 14-09-2016 AY555_RS00530 017d0484df33da2439c0fd44b1963b75 251 PANTHER PTHR24322:SF363 147 179 3.7E-37 T 14-09-2016 AY555_RS00530 017d0484df33da2439c0fd44b1963b75 251 SUPERFAMILY SSF51735 7 245 7.45E-54 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS00530 017d0484df33da2439c0fd44b1963b75 251 Gene3D G3DSA:3.40.50.720 10 247 8.8E-50 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS00530 017d0484df33da2439c0fd44b1963b75 251 PANTHER PTHR24322 12 131 3.7E-37 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS00530 017d0484df33da2439c0fd44b1963b75 251 PANTHER PTHR24322 147 179 3.7E-37 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS00060 e767f33caaa95d5d6d3f92a00da3b1d7 115 PANTHER PTHR34653 3 115 4.4E-15 T 14-09-2016 AY555_RS00060 e767f33caaa95d5d6d3f92a00da3b1d7 115 Pfam PF02049 Flagellar hook-basal body complex protein FliE 35 115 3.9E-20 T 14-09-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AY555_RS00060 e767f33caaa95d5d6d3f92a00da3b1d7 115 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 100 113 6.9E-6 T 14-09-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AY555_RS00060 e767f33caaa95d5d6d3f92a00da3b1d7 115 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 46 62 6.9E-6 T 14-09-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AY555_RS00060 e767f33caaa95d5d6d3f92a00da3b1d7 115 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 79 95 6.9E-6 T 14-09-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AY555_RS00060 e767f33caaa95d5d6d3f92a00da3b1d7 115 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 3 115 15.979 T 14-09-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AY555_RS08925 3231ee33ee9a1e77ccc9f5fad4bdc7c1 349 Gene3D G3DSA:3.40.1030.10 74 334 1.3E-104 T 14-09-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 AY555_RS08925 3231ee33ee9a1e77ccc9f5fad4bdc7c1 349 PANTHER PTHR11922:SF5 21 36 6.0E-111 T 14-09-2016 AY555_RS08925 3231ee33ee9a1e77ccc9f5fad4bdc7c1 349 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 7 335 38.28 T 14-09-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 AY555_RS08925 3231ee33ee9a1e77ccc9f5fad4bdc7c1 349 PANTHER PTHR11922 63 335 6.0E-111 T 14-09-2016 AY555_RS08925 3231ee33ee9a1e77ccc9f5fad4bdc7c1 349 PANTHER PTHR11922 21 36 6.0E-111 T 14-09-2016 AY555_RS08925 3231ee33ee9a1e77ccc9f5fad4bdc7c1 349 Pfam PF02885 Glycosyl transferase family, helical bundle domain 9 68 1.7E-21 T 14-09-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain AY555_RS08925 3231ee33ee9a1e77ccc9f5fad4bdc7c1 349 PANTHER PTHR11922:SF5 63 335 6.0E-111 T 14-09-2016 AY555_RS08925 3231ee33ee9a1e77ccc9f5fad4bdc7c1 349 Pfam PF00591 Glycosyl transferase family, a/b domain 77 325 3.2E-94 T 14-09-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 AY555_RS08925 3231ee33ee9a1e77ccc9f5fad4bdc7c1 349 SUPERFAMILY SSF47648 7 71 9.29E-21 T 14-09-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain AY555_RS08925 3231ee33ee9a1e77ccc9f5fad4bdc7c1 349 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 11 334 1.8E-122 T 14-09-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 AY555_RS08925 3231ee33ee9a1e77ccc9f5fad4bdc7c1 349 SUPERFAMILY SSF52418 75 340 7.2E-93 T 14-09-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 AY555_RS08925 3231ee33ee9a1e77ccc9f5fad4bdc7c1 349 Gene3D G3DSA:1.20.970.10 8 71 3.8E-26 T 14-09-2016 AY555_RS08005 519a12d442543feb27ab493b0a77cd23 226 Gene3D G3DSA:1.10.1520.10 9 153 5.7E-43 T 14-09-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 AY555_RS08005 519a12d442543feb27ab493b0a77cd23 226 SUPERFAMILY SSF54768 116 225 3.46E-29 T 14-09-2016 AY555_RS08005 519a12d442543feb27ab493b0a77cd23 226 SMART SM00535 20 154 2.4E-49 T 14-09-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 AY555_RS08005 519a12d442543feb27ab493b0a77cd23 226 Pfam PF14622 Ribonuclease-III-like 18 146 7.1E-35 T 14-09-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 AY555_RS08005 519a12d442543feb27ab493b0a77cd23 226 SMART SM00358 159 226 1.4E-23 T 14-09-2016 IPR014720 Double-stranded RNA-binding domain AY555_RS08005 519a12d442543feb27ab493b0a77cd23 226 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 222 27.801 T 14-09-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 AY555_RS08005 519a12d442543feb27ab493b0a77cd23 226 ProSitePatterns PS00517 Ribonuclease III family signature. 43 51 - T 14-09-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 AY555_RS08005 519a12d442543feb27ab493b0a77cd23 226 Gene3D G3DSA:3.30.160.20 157 225 1.6E-24 T 14-09-2016 IPR014720 Double-stranded RNA-binding domain AY555_RS08005 519a12d442543feb27ab493b0a77cd23 226 PANTHER PTHR11207 12 225 9.6E-70 T 14-09-2016 AY555_RS08005 519a12d442543feb27ab493b0a77cd23 226 SUPERFAMILY SSF69065 8 161 1.13E-44 T 14-09-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 AY555_RS08005 519a12d442543feb27ab493b0a77cd23 226 Pfam PF00035 Double-stranded RNA binding motif 159 225 7.2E-12 T 14-09-2016 IPR014720 Double-stranded RNA-binding domain AY555_RS08005 519a12d442543feb27ab493b0a77cd23 226 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 11 225 3.6E-69 T 14-09-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 AY555_RS03990 333b9af6d2d58d7a00ebc69a0d66350f 326 PANTHER PTHR10996 1 316 2.3E-115 T 14-09-2016 AY555_RS03990 333b9af6d2d58d7a00ebc69a0d66350f 326 Gene3D G3DSA:3.40.50.720 5 118 3.6E-34 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS03990 333b9af6d2d58d7a00ebc69a0d66350f 326 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 113 292 6.8E-57 T 14-09-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AY555_RS03990 333b9af6d2d58d7a00ebc69a0d66350f 326 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 153 180 - T 14-09-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AY555_RS03990 333b9af6d2d58d7a00ebc69a0d66350f 326 SUPERFAMILY SSF51735 105 293 2.27E-59 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS03990 333b9af6d2d58d7a00ebc69a0d66350f 326 SUPERFAMILY SSF52283 5 139 5.29E-36 T 14-09-2016 AY555_RS03990 333b9af6d2d58d7a00ebc69a0d66350f 326 Gene3D G3DSA:3.40.50.720 119 295 8.8E-64 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS03990 333b9af6d2d58d7a00ebc69a0d66350f 326 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 18 323 9.7E-29 T 14-09-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AY555_RS02510 745803cdf2ea9e6cd660a3b05a574b7c 374 Gene3D G3DSA:2.40.30.110 289 373 8.7E-26 T 14-09-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AY555_RS02510 745803cdf2ea9e6cd660a3b05a574b7c 374 SUPERFAMILY SSF103025 11 283 2.35E-74 T 14-09-2016 AY555_RS02510 745803cdf2ea9e6cd660a3b05a574b7c 374 PIRSF PIRSF006487 3 373 7.8E-71 T 14-09-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AY555_RS02510 745803cdf2ea9e6cd660a3b05a574b7c 374 SUPERFAMILY SSF101790 279 373 1.64E-24 T 14-09-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain AY555_RS02510 745803cdf2ea9e6cd660a3b05a574b7c 374 PANTHER PTHR13847 12 368 1.1E-111 T 14-09-2016 AY555_RS02510 745803cdf2ea9e6cd660a3b05a574b7c 374 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 14 368 7.4E-82 T 14-09-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AY555_RS02510 745803cdf2ea9e6cd660a3b05a574b7c 374 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 271 364 3.3E-22 T 14-09-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AY555_RS02510 745803cdf2ea9e6cd660a3b05a574b7c 374 Gene3D G3DSA:3.30.1360.120 11 59 2.6E-48 T 14-09-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AY555_RS02510 745803cdf2ea9e6cd660a3b05a574b7c 374 Gene3D G3DSA:3.30.1360.120 152 239 2.6E-48 T 14-09-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AY555_RS02510 745803cdf2ea9e6cd660a3b05a574b7c 374 Gene3D G3DSA:3.30.70.1400 60 146 3.7E-21 T 14-09-2016 AY555_RS02510 745803cdf2ea9e6cd660a3b05a574b7c 374 PANTHER PTHR13847:SF209 12 368 1.1E-111 T 14-09-2016 AY555_RS02510 745803cdf2ea9e6cd660a3b05a574b7c 374 Pfam PF01571 Aminomethyltransferase folate-binding domain 15 261 1.8E-74 T 14-09-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal AY555_RS02040 e2816b15b3b5a5ead086ad0e60f83fad 425 SUPERFAMILY SSF103473 6 381 7.19E-37 T 14-09-2016 IPR020846 Major facilitator superfamily domain AY555_RS02040 e2816b15b3b5a5ead086ad0e60f83fad 425 Pfam PF07690 Major Facilitator Superfamily 206 382 1.1E-14 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AY555_RS02040 e2816b15b3b5a5ead086ad0e60f83fad 425 PANTHER PTHR23521 3 385 4.1E-78 T 14-09-2016 AY555_RS02040 e2816b15b3b5a5ead086ad0e60f83fad 425 Gene3D G3DSA:1.20.1250.20 7 188 4.5E-15 T 14-09-2016 AY555_RS02040 e2816b15b3b5a5ead086ad0e60f83fad 425 Gene3D G3DSA:1.20.1250.20 205 381 1.2E-19 T 14-09-2016 AY555_RS02040 e2816b15b3b5a5ead086ad0e60f83fad 425 PANTHER PTHR23521:SF2 3 385 4.1E-78 T 14-09-2016 AY555_RS02225 118609fe4180b476c25bdfecb1a636e9 388 Pfam PF00881 Nitroreductase family 167 371 4.9E-7 T 14-09-2016 IPR029479 Nitroreductase AY555_RS02225 118609fe4180b476c25bdfecb1a636e9 388 SUPERFAMILY SSF55469 57 125 1.15E-5 T 14-09-2016 IPR000415 Nitroreductase-like GO:0016491 AY555_RS02225 118609fe4180b476c25bdfecb1a636e9 388 SUPERFAMILY SSF55469 287 383 1.26E-7 T 14-09-2016 IPR000415 Nitroreductase-like GO:0016491 AY555_RS02225 118609fe4180b476c25bdfecb1a636e9 388 SUPERFAMILY SSF55469 162 220 1.26E-7 T 14-09-2016 IPR000415 Nitroreductase-like GO:0016491 AY555_RS02225 118609fe4180b476c25bdfecb1a636e9 388 Gene3D G3DSA:3.40.109.10 290 386 1.4E-17 T 14-09-2016 IPR000415 Nitroreductase-like GO:0016491 AY555_RS02225 118609fe4180b476c25bdfecb1a636e9 388 Gene3D G3DSA:3.40.109.10 205 219 1.4E-17 T 14-09-2016 IPR000415 Nitroreductase-like GO:0016491 AY555_RS02225 118609fe4180b476c25bdfecb1a636e9 388 Gene3D G3DSA:3.40.109.30 61 133 3.6E-6 T 14-09-2016 AY555_RS06665 1b06350e46ccda2322da297c811935ef 443 PANTHER PTHR30001 6 443 2.9E-53 T 14-09-2016 AY555_RS06665 1b06350e46ccda2322da297c811935ef 443 Pfam PF10150 Ribonuclease E/G family 108 352 1.8E-35 T 14-09-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AY555_RS06665 1b06350e46ccda2322da297c811935ef 443 Gene3D G3DSA:2.40.50.140 39 111 3.4E-8 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS06665 1b06350e46ccda2322da297c811935ef 443 SUPERFAMILY SSF50249 41 110 4.85E-6 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS07040 09c5d63e2f6bb129ce85ebae15cfc01f 382 SUPERFAMILY SSF51690 120 253 6.08E-33 T 14-09-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 AY555_RS07040 09c5d63e2f6bb129ce85ebae15cfc01f 382 SUPERFAMILY SSF51690 290 374 6.08E-33 T 14-09-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 AY555_RS07040 09c5d63e2f6bb129ce85ebae15cfc01f 382 SUPERFAMILY SSF54675 15 111 5.55E-6 T 14-09-2016 AY555_RS07040 09c5d63e2f6bb129ce85ebae15cfc01f 382 Gene3D G3DSA:3.90.1170.20 56 125 2.2E-5 T 14-09-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 AY555_RS07040 09c5d63e2f6bb129ce85ebae15cfc01f 382 Gene3D G3DSA:3.20.20.70 126 258 7.3E-34 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS07040 09c5d63e2f6bb129ce85ebae15cfc01f 382 Gene3D G3DSA:3.20.20.70 295 349 7.3E-34 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS06295 add34917ccde192bd6e99b9422c433ba 243 Pfam PF01728 FtsJ-like methyltransferase 62 241 6.7E-52 T 14-09-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AY555_RS06295 add34917ccde192bd6e99b9422c433ba 243 SUPERFAMILY SSF53335 61 243 1.01E-37 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS06295 add34917ccde192bd6e99b9422c433ba 243 PANTHER PTHR10920 32 243 9.6E-93 T 14-09-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 AY555_RS06295 add34917ccde192bd6e99b9422c433ba 243 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 42 241 28.097 T 14-09-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 AY555_RS06295 add34917ccde192bd6e99b9422c433ba 243 Gene3D G3DSA:3.40.50.150 22 242 2.4E-67 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS06295 add34917ccde192bd6e99b9422c433ba 243 PIRSF PIRSF005461 26 243 1.5E-66 T 14-09-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 AY555_RS09365 c15fe93a5eb3f7e5318132619263cc7e 265 Pfam PF01618 MotA/TolQ/ExbB proton channel family 105 216 4.9E-18 T 14-09-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AY555_RS09365 c15fe93a5eb3f7e5318132619263cc7e 265 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 186 203 - T 14-09-2016 IPR000540 Flagellar motor protein MotA, conserved site AY555_RS09365 c15fe93a5eb3f7e5318132619263cc7e 265 PANTHER PTHR30433 2 251 3.0E-54 T 14-09-2016 AY555_RS06270 4d8b6571f77cb94b707479ee79506040 225 PIRSF PIRSF000441 1 223 2.1E-84 T 14-09-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 AY555_RS06270 4d8b6571f77cb94b707479ee79506040 225 Gene3D G3DSA:2.160.10.10 61 212 1.5E-35 T 14-09-2016 AY555_RS06270 4d8b6571f77cb94b707479ee79506040 225 Gene3D G3DSA:1.10.3130.10 2 60 1.6E-26 T 14-09-2016 AY555_RS06270 4d8b6571f77cb94b707479ee79506040 225 SUPERFAMILY SSF51161 2 169 3.47E-55 T 14-09-2016 IPR011004 Trimeric LpxA-like AY555_RS06270 4d8b6571f77cb94b707479ee79506040 225 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 72 109 8.1E-6 T 14-09-2016 IPR001451 Hexapeptide repeat AY555_RS06270 4d8b6571f77cb94b707479ee79506040 225 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 151 1.3E-5 T 14-09-2016 IPR001451 Hexapeptide repeat AY555_RS06270 4d8b6571f77cb94b707479ee79506040 225 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 7 167 2.1E-75 T 14-09-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 AY555_RS06270 4d8b6571f77cb94b707479ee79506040 225 PANTHER PTHR23416 2 225 1.2E-96 T 14-09-2016 AY555_RS06270 4d8b6571f77cb94b707479ee79506040 225 PANTHER PTHR23416:SF55 2 225 1.2E-96 T 14-09-2016 AY555_RS07130 113e6a33f7531802dd0a0a2c63932472 228 Pfam PF00849 RNA pseudouridylate synthase 17 167 6.2E-31 T 14-09-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AY555_RS07130 113e6a33f7531802dd0a0a2c63932472 228 PANTHER PTHR11079 9 226 4.3E-59 T 14-09-2016 AY555_RS07130 113e6a33f7531802dd0a0a2c63932472 228 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 56 70 - T 14-09-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AY555_RS07130 113e6a33f7531802dd0a0a2c63932472 228 SUPERFAMILY SSF55120 6 225 1.06E-61 T 14-09-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AY555_RS07490 77693f5730fe3fabb18213d880209ccf 152 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 7 137 6.2E-46 T 14-09-2016 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- AY555_RS07490 77693f5730fe3fabb18213d880209ccf 152 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 10 100 1.5E-28 T 14-09-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AY555_RS07490 77693f5730fe3fabb18213d880209ccf 152 Gene3D G3DSA:3.10.129.10 7 139 1.6E-44 T 14-09-2016 IPR029069 HotDog domain AY555_RS07490 77693f5730fe3fabb18213d880209ccf 152 PANTHER PTHR31793:SF9 7 136 2.4E-37 T 14-09-2016 AY555_RS07490 77693f5730fe3fabb18213d880209ccf 152 PIRSF PIRSF003230 1 147 2.0E-47 T 14-09-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AY555_RS07490 77693f5730fe3fabb18213d880209ccf 152 SUPERFAMILY SSF54637 3 138 2.69E-36 T 14-09-2016 IPR029069 HotDog domain AY555_RS07490 77693f5730fe3fabb18213d880209ccf 152 Pfam PF03061 Thioesterase superfamily 21 103 1.1E-17 T 14-09-2016 IPR006683 Thioesterase domain AY555_RS07490 77693f5730fe3fabb18213d880209ccf 152 PANTHER PTHR31793 7 136 2.4E-37 T 14-09-2016 AY555_RS02180 7e31cd1046c95bed632823028b8e2349 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 100 114 5.2E-13 T 14-09-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AY555_RS02180 7e31cd1046c95bed632823028b8e2349 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 57 68 5.2E-13 T 14-09-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AY555_RS02180 7e31cd1046c95bed632823028b8e2349 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 31 39 5.2E-13 T 14-09-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AY555_RS02180 7e31cd1046c95bed632823028b8e2349 313 SUPERFAMILY SSF53474 11 293 3.74E-55 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AY555_RS02180 7e31cd1046c95bed632823028b8e2349 313 Gene3D G3DSA:3.40.50.1820 6 305 1.3E-59 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AY555_RS02180 7e31cd1046c95bed632823028b8e2349 313 PIRSF PIRSF006431 1 310 3.8E-118 T 14-09-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 AY555_RS02180 7e31cd1046c95bed632823028b8e2349 313 PANTHER PTHR10992:SF860 7 168 1.6E-95 T 14-09-2016 AY555_RS02180 7e31cd1046c95bed632823028b8e2349 313 PANTHER PTHR10992:SF860 207 308 1.6E-95 T 14-09-2016 AY555_RS02180 7e31cd1046c95bed632823028b8e2349 313 Pfam PF00561 alpha/beta hydrolase fold 30 291 1.9E-23 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AY555_RS02180 7e31cd1046c95bed632823028b8e2349 313 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 4 306 1.4E-105 T 14-09-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 AY555_RS02180 7e31cd1046c95bed632823028b8e2349 313 PANTHER PTHR10992 7 168 1.6E-95 T 14-09-2016 AY555_RS02180 7e31cd1046c95bed632823028b8e2349 313 PANTHER PTHR10992 207 308 1.6E-95 T 14-09-2016 AY555_RS09595 5742c86f6db90ea4528a23900911fadc 386 PANTHER PTHR24421 1 379 8.5E-119 T 14-09-2016 AY555_RS09595 5742c86f6db90ea4528a23900911fadc 386 PIRSF PIRSF000876 1 386 9.1E-118 T 14-09-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AY555_RS09595 5742c86f6db90ea4528a23900911fadc 386 SUPERFAMILY SSF52738 193 383 3.4E-62 T 14-09-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AY555_RS09595 5742c86f6db90ea4528a23900911fadc 386 Gene3D G3DSA:3.40.50.2300 1 110 8.1E-28 T 14-09-2016 AY555_RS09595 5742c86f6db90ea4528a23900911fadc 386 Pfam PF00072 Response regulator receiver domain 1 110 5.7E-22 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS09595 5742c86f6db90ea4528a23900911fadc 386 PANTHER PTHR24421:SF16 1 379 8.5E-119 T 14-09-2016 AY555_RS09595 5742c86f6db90ea4528a23900911fadc 386 Pfam PF01339 CheB methylesterase 197 378 2.0E-53 T 14-09-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AY555_RS09595 5742c86f6db90ea4528a23900911fadc 386 SMART SM00448 1 113 2.9E-18 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS09595 5742c86f6db90ea4528a23900911fadc 386 Gene3D G3DSA:3.40.50.180 189 383 9.7E-68 T 14-09-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AY555_RS09595 5742c86f6db90ea4528a23900911fadc 386 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 1 383 33.031 T 14-09-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AY555_RS09595 5742c86f6db90ea4528a23900911fadc 386 SUPERFAMILY SSF52172 1 110 3.13E-25 T 14-09-2016 IPR011006 CheY-like superfamily AY555_RS00865 f284992f0ba3f353cd1343cbb1ea40cc 447 Hamap MF_01465 Protein translocase subunit SecY [secY]. 14 437 29.57 T 14-09-2016 IPR026593 Protein translocase subunit SecY AY555_RS00865 f284992f0ba3f353cd1343cbb1ea40cc 447 ProSitePatterns PS00756 Protein secY signature 2. 178 195 - T 14-09-2016 IPR030659 SecY conserved site AY555_RS00865 f284992f0ba3f353cd1343cbb1ea40cc 447 Gene3D G3DSA:1.10.3370.10 19 441 2.1E-166 T 14-09-2016 IPR023201 SecY subunit domain AY555_RS00865 f284992f0ba3f353cd1343cbb1ea40cc 447 PANTHER PTHR10906:SF2 22 446 1.1E-209 T 14-09-2016 AY555_RS00865 f284992f0ba3f353cd1343cbb1ea40cc 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 374 392 1.7E-97 T 14-09-2016 AY555_RS00865 f284992f0ba3f353cd1343cbb1ea40cc 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 406 424 1.7E-97 T 14-09-2016 AY555_RS00865 f284992f0ba3f353cd1343cbb1ea40cc 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 277 296 1.7E-97 T 14-09-2016 AY555_RS00865 f284992f0ba3f353cd1343cbb1ea40cc 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 185 208 1.7E-97 T 14-09-2016 AY555_RS00865 f284992f0ba3f353cd1343cbb1ea40cc 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 120 143 1.7E-97 T 14-09-2016 AY555_RS00865 f284992f0ba3f353cd1343cbb1ea40cc 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 159 184 1.7E-97 T 14-09-2016 AY555_RS00865 f284992f0ba3f353cd1343cbb1ea40cc 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 79 99 1.7E-97 T 14-09-2016 AY555_RS00865 f284992f0ba3f353cd1343cbb1ea40cc 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 27 45 1.7E-97 T 14-09-2016 AY555_RS00865 f284992f0ba3f353cd1343cbb1ea40cc 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 319 341 1.7E-97 T 14-09-2016 AY555_RS00865 f284992f0ba3f353cd1343cbb1ea40cc 447 PIRSF PIRSF004557 9 445 2.1E-124 T 14-09-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 AY555_RS00865 f284992f0ba3f353cd1343cbb1ea40cc 447 Pfam PF00344 SecY translocase 80 421 4.5E-118 T 14-09-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 AY555_RS00865 f284992f0ba3f353cd1343cbb1ea40cc 447 SUPERFAMILY SSF103491 17 428 1.02E-132 T 14-09-2016 IPR023201 SecY subunit domain AY555_RS00865 f284992f0ba3f353cd1343cbb1ea40cc 447 ProSitePatterns PS00755 Protein secY signature 1. 80 99 - T 14-09-2016 IPR030659 SecY conserved site AY555_RS00865 f284992f0ba3f353cd1343cbb1ea40cc 447 PANTHER PTHR10906 22 446 1.1E-209 T 14-09-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 AY555_RS00865 f284992f0ba3f353cd1343cbb1ea40cc 447 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 24 432 1.2E-129 T 14-09-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 AY555_RS07045 3ca8b2d488b3a6bb9153820ee85a7b1f 556 PANTHER PTHR23090 2 552 3.2E-141 T 14-09-2016 AY555_RS07045 3ca8b2d488b3a6bb9153820ee85a7b1f 556 Gene3D G3DSA:3.60.110.10 3 246 1.1E-58 T 14-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AY555_RS07045 3ca8b2d488b3a6bb9153820ee85a7b1f 556 TIGRFAM TIGR00552 nadE: NAD+ synthetase 278 532 6.1E-55 T 14-09-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 AY555_RS07045 3ca8b2d488b3a6bb9153820ee85a7b1f 556 Gene3D G3DSA:3.40.50.620 265 536 7.4E-74 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS07045 3ca8b2d488b3a6bb9153820ee85a7b1f 556 Pfam PF02540 NAD synthase 271 529 5.1E-69 T 14-09-2016 IPR022310 NAD/GMP synthase AY555_RS07045 3ca8b2d488b3a6bb9153820ee85a7b1f 556 SUPERFAMILY SSF56317 3 245 9.42E-62 T 14-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AY555_RS07045 3ca8b2d488b3a6bb9153820ee85a7b1f 556 Pfam PF00795 Carbon-nitrogen hydrolase 6 250 4.9E-29 T 14-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AY555_RS07045 3ca8b2d488b3a6bb9153820ee85a7b1f 556 SUPERFAMILY SSF52402 263 536 4.19E-75 T 14-09-2016 AY555_RS07045 3ca8b2d488b3a6bb9153820ee85a7b1f 556 PIRSF PIRSF006630 2 555 1.2E-175 T 14-09-2016 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|UniPathway: UPA00253 AY555_RS06830 ade0b8d3842e981cb93ab7e796ce2b55 354 PANTHER PTHR32332 28 349 1.7E-75 T 14-09-2016 AY555_RS06830 ade0b8d3842e981cb93ab7e796ce2b55 354 Gene3D G3DSA:3.20.20.70 31 334 7.5E-52 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS06830 ade0b8d3842e981cb93ab7e796ce2b55 354 PANTHER PTHR32332:SF20 28 349 1.7E-75 T 14-09-2016 AY555_RS06830 ade0b8d3842e981cb93ab7e796ce2b55 354 Pfam PF03060 Nitronate monooxygenase 103 338 4.4E-36 T 14-09-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AY555_RS06830 ade0b8d3842e981cb93ab7e796ce2b55 354 Pfam PF03060 Nitronate monooxygenase 29 101 4.1E-20 T 14-09-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AY555_RS06830 ade0b8d3842e981cb93ab7e796ce2b55 354 SUPERFAMILY SSF51412 31 345 8.39E-52 T 14-09-2016 AY555_RS03935 2131a8ba01dd305280a14b0c4e46527b 256 PANTHER PTHR23293 1 152 4.7E-42 T 14-09-2016 AY555_RS03935 2131a8ba01dd305280a14b0c4e46527b 256 Gene3D G3DSA:3.40.980.10 4 202 1.3E-36 T 14-09-2016 IPR001453 MoaB/Mog domain AY555_RS03935 2131a8ba01dd305280a14b0c4e46527b 256 SMART SM00852 7 168 4.7E-32 T 14-09-2016 IPR001453 MoaB/Mog domain AY555_RS03935 2131a8ba01dd305280a14b0c4e46527b 256 Pfam PF00994 Probable molybdopterin binding domain 8 163 2.2E-32 T 14-09-2016 IPR001453 MoaB/Mog domain AY555_RS03935 2131a8ba01dd305280a14b0c4e46527b 256 SUPERFAMILY SSF53218 5 196 2.22E-38 T 14-09-2016 IPR001453 MoaB/Mog domain AY555_RS03935 2131a8ba01dd305280a14b0c4e46527b 256 PANTHER PTHR23293:SF5 1 152 4.7E-42 T 14-09-2016 AY555_RS08580 3e874e5da5c717105ad78bbdf6ef6048 173 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 23 166 3.5E-47 T 14-09-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AY555_RS08580 3e874e5da5c717105ad78bbdf6ef6048 173 Gene3D G3DSA:2.40.100.10 4 170 5.0E-51 T 14-09-2016 IPR029000 Cyclophilin-like domain AY555_RS08580 3e874e5da5c717105ad78bbdf6ef6048 173 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 115 127 1.2E-11 T 14-09-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AY555_RS08580 3e874e5da5c717105ad78bbdf6ef6048 173 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 128 143 1.2E-11 T 14-09-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AY555_RS08580 3e874e5da5c717105ad78bbdf6ef6048 173 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 1.2E-11 T 14-09-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AY555_RS08580 3e874e5da5c717105ad78bbdf6ef6048 173 PANTHER PTHR11071 27 146 6.4E-51 T 14-09-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 AY555_RS08580 3e874e5da5c717105ad78bbdf6ef6048 173 PIRSF PIRSF001467 4 171 3.7E-35 T 14-09-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 AY555_RS08580 3e874e5da5c717105ad78bbdf6ef6048 173 SUPERFAMILY SSF50891 12 168 6.43E-53 T 14-09-2016 IPR029000 Cyclophilin-like domain AY555_RS08580 3e874e5da5c717105ad78bbdf6ef6048 173 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 56 73 - T 14-09-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 AY555_RS01685 75d892584f17e643845c5eb0832f6b03 211 Pfam PF00226 DnaJ domain 154 203 6.3E-13 T 14-09-2016 IPR001623 DnaJ domain AY555_RS01685 75d892584f17e643845c5eb0832f6b03 211 Gene3D G3DSA:1.10.287.110 152 203 1.5E-12 T 14-09-2016 IPR001623 DnaJ domain AY555_RS01685 75d892584f17e643845c5eb0832f6b03 211 PRINTS PR00625 DnaJ domain signature 153 171 3.2E-8 T 14-09-2016 IPR001623 DnaJ domain AY555_RS01685 75d892584f17e643845c5eb0832f6b03 211 PRINTS PR00625 DnaJ domain signature 171 186 3.2E-8 T 14-09-2016 IPR001623 DnaJ domain AY555_RS01685 75d892584f17e643845c5eb0832f6b03 211 PRINTS PR00625 DnaJ domain signature 188 208 3.2E-8 T 14-09-2016 IPR001623 DnaJ domain AY555_RS01685 75d892584f17e643845c5eb0832f6b03 211 SMART SM00271 150 208 1.7E-14 T 14-09-2016 IPR001623 DnaJ domain AY555_RS01685 75d892584f17e643845c5eb0832f6b03 211 SUPERFAMILY SSF46565 148 204 1.7E-14 T 14-09-2016 IPR001623 DnaJ domain AY555_RS01600 c8847e7428ff709404fc4232af0e1272 252 Pfam PF01066 CDP-alcohol phosphatidyltransferase 17 81 1.6E-13 T 14-09-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AY555_RS01600 c8847e7428ff709404fc4232af0e1272 252 Pfam PF08009 CDP-alcohol phosphatidyltransferase 2 201 237 7.9E-14 T 14-09-2016 IPR012616 CDP-alcohol phosphatidyltransferase, C-terminal AY555_RS01600 c8847e7428ff709404fc4232af0e1272 252 PANTHER PTHR15362:SF5 8 250 1.2E-31 T 14-09-2016 AY555_RS01600 c8847e7428ff709404fc4232af0e1272 252 PANTHER PTHR15362 8 250 1.2E-31 T 14-09-2016 AY555_RS01600 c8847e7428ff709404fc4232af0e1272 252 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 23 189 2.3E-35 T 14-09-2016 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 AY555_RS01600 c8847e7428ff709404fc4232af0e1272 252 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 59 81 - T 14-09-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AY555_RS04565 1a72a1550ff690598e9c2768d0c99219 430 Pfam PF00589 Phage integrase family 273 405 7.6E-12 T 14-09-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AY555_RS04565 1a72a1550ff690598e9c2768d0c99219 430 SUPERFAMILY SSF56349 160 405 3.06E-26 T 14-09-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AY555_RS04565 1a72a1550ff690598e9c2768d0c99219 430 Gene3D G3DSA:1.10.443.10 271 405 3.1E-16 T 14-09-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AY555_RS00505 eae9a18220591e120d7e57d200b437f3 340 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 40 325 2.0E-102 T 14-09-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 AY555_RS00505 eae9a18220591e120d7e57d200b437f3 340 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 3 329 34.66 T 14-09-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 AY555_RS00505 eae9a18220591e120d7e57d200b437f3 340 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 329 1.2E-125 T 14-09-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 AY555_RS00505 eae9a18220591e120d7e57d200b437f3 340 PANTHER PTHR30004 1 339 3.0E-132 T 14-09-2016 AY555_RS00505 eae9a18220591e120d7e57d200b437f3 340 SUPERFAMILY SSF53659 5 330 3.84E-107 T 14-09-2016 AY555_RS00505 eae9a18220591e120d7e57d200b437f3 340 Gene3D G3DSA:3.40.718.10 4 330 3.0E-125 T 14-09-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AY555_RS00505 eae9a18220591e120d7e57d200b437f3 340 PANTHER PTHR30004:SF6 1 339 3.0E-132 T 14-09-2016 AY555_RS09340 0b1ee50217784239c6e4b712f49a3203 728 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 6 304 4.3E-45 T 14-09-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AY555_RS09340 0b1ee50217784239c6e4b712f49a3203 728 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 553 708 1.5E-38 T 14-09-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AY555_RS09340 0b1ee50217784239c6e4b712f49a3203 728 Pfam PF00460 Flagella basal body rod protein 10 37 2.3E-6 T 14-09-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AY555_RS09340 0b1ee50217784239c6e4b712f49a3203 728 PANTHER PTHR30435 605 728 3.2E-65 T 14-09-2016 AY555_RS09340 0b1ee50217784239c6e4b712f49a3203 728 PANTHER PTHR30435:SF1 2 129 3.2E-65 T 14-09-2016 AY555_RS09340 0b1ee50217784239c6e4b712f49a3203 728 SUPERFAMILY SSF117143 81 139 2.22E-27 T 14-09-2016 AY555_RS09340 0b1ee50217784239c6e4b712f49a3203 728 SUPERFAMILY SSF117143 170 321 2.22E-27 T 14-09-2016 AY555_RS09340 0b1ee50217784239c6e4b712f49a3203 728 Pfam PF07559 Flagellar basal body protein FlaE 209 340 4.7E-5 T 14-09-2016 IPR011491 Flagellar hook protein FlgE AY555_RS09340 0b1ee50217784239c6e4b712f49a3203 728 SUPERFAMILY SSF117143 512 688 1.83E-25 T 14-09-2016 AY555_RS09340 0b1ee50217784239c6e4b712f49a3203 728 PANTHER PTHR30435 2 129 3.2E-65 T 14-09-2016 AY555_RS09340 0b1ee50217784239c6e4b712f49a3203 728 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 648 726 1.1E-18 T 14-09-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AY555_RS09340 0b1ee50217784239c6e4b712f49a3203 728 PANTHER PTHR30435:SF1 605 728 3.2E-65 T 14-09-2016 AY555_RS09615 3add60d7988a471b86dea6ad73d439a6 833 PANTHER PTHR18934 13 459 2.0E-140 T 14-09-2016 AY555_RS09615 3add60d7988a471b86dea6ad73d439a6 833 Pfam PF00270 DEAD/DEAH box helicase 28 170 6.9E-8 T 14-09-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AY555_RS09615 3add60d7988a471b86dea6ad73d439a6 833 Gene3D G3DSA:3.40.50.300 205 354 2.9E-16 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS09615 3add60d7988a471b86dea6ad73d439a6 833 SUPERFAMILY SSF52540 25 348 9.72E-50 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS09615 3add60d7988a471b86dea6ad73d439a6 833 Pfam PF04408 Helicase associated domain (HA2) 399 473 2.1E-16 T 14-09-2016 IPR007502 Helicase-associated domain GO:0004386 AY555_RS09615 3add60d7988a471b86dea6ad73d439a6 833 Pfam PF00271 Helicase conserved C-terminal domain 214 339 1.6E-12 T 14-09-2016 IPR001650 Helicase, C-terminal AY555_RS09615 3add60d7988a471b86dea6ad73d439a6 833 SMART SM00847 398 490 5.0E-20 T 14-09-2016 IPR007502 Helicase-associated domain GO:0004386 AY555_RS09615 3add60d7988a471b86dea6ad73d439a6 833 PIRSF PIRSF005496 8 832 0.0 T 14-09-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type AY555_RS09615 3add60d7988a471b86dea6ad73d439a6 833 Gene3D G3DSA:3.40.50.300 13 170 9.3E-46 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS09615 3add60d7988a471b86dea6ad73d439a6 833 SMART SM00490 236 339 1.1E-16 T 14-09-2016 IPR001650 Helicase, C-terminal AY555_RS09615 3add60d7988a471b86dea6ad73d439a6 833 Pfam PF08482 ATP-dependent helicase C-terminal 686 818 3.4E-51 T 14-09-2016 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal AY555_RS09615 3add60d7988a471b86dea6ad73d439a6 833 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 13 831 0.0 T 14-09-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type AY555_RS09615 3add60d7988a471b86dea6ad73d439a6 833 SMART SM00487 14 196 2.1E-15 T 14-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AY555_RS07375 4906c33c20e3c5bfe922eee77f511247 687 SUPERFAMILY SSF52242 536 677 6.67E-7 T 14-09-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 AY555_RS07375 4906c33c20e3c5bfe922eee77f511247 687 SUPERFAMILY SSF51703 22 528 2.28E-123 T 14-09-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 AY555_RS07375 4906c33c20e3c5bfe922eee77f511247 687 Pfam PF01642 Methylmalonyl-CoA mutase 48 520 1.0E-118 T 14-09-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 AY555_RS07375 4906c33c20e3c5bfe922eee77f511247 687 Gene3D G3DSA:3.20.20.240 539 563 8.2E-122 T 14-09-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 AY555_RS07375 4906c33c20e3c5bfe922eee77f511247 687 Gene3D G3DSA:3.20.20.240 47 498 8.2E-122 T 14-09-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 AY555_RS07375 4906c33c20e3c5bfe922eee77f511247 687 PANTHER PTHR23408:SF13 69 573 1.4E-71 T 14-09-2016 AY555_RS07375 4906c33c20e3c5bfe922eee77f511247 687 PANTHER PTHR23408 69 573 1.4E-71 T 14-09-2016 AY555_RS07375 4906c33c20e3c5bfe922eee77f511247 687 Gene3D G3DSA:3.40.50.280 564 634 5.3E-5 T 14-09-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 AY555_RS08010 a62b3114792feb4bc0599cd24ab93e1a 303 Pfam PF01926 50S ribosome-binding GTPase 12 128 9.5E-21 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AY555_RS08010 a62b3114792feb4bc0599cd24ab93e1a 303 SUPERFAMILY SSF54814 184 300 5.43E-37 T 14-09-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 AY555_RS08010 a62b3114792feb4bc0599cd24ab93e1a 303 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 168 5.3E-28 T 14-09-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AY555_RS08010 a62b3114792feb4bc0599cd24ab93e1a 303 PANTHER PTHR11649 5 298 1.7E-112 T 14-09-2016 AY555_RS08010 a62b3114792feb4bc0599cd24ab93e1a 303 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 12 32 6.1E-6 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AY555_RS08010 a62b3114792feb4bc0599cd24ab93e1a 303 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 61 76 6.1E-6 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AY555_RS08010 a62b3114792feb4bc0599cd24ab93e1a 303 TIGRFAM TIGR00436 era: GTP-binding protein Era 11 281 4.8E-68 T 14-09-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 AY555_RS08010 a62b3114792feb4bc0599cd24ab93e1a 303 Hamap MF_00367 GTPase Era [era]. 7 299 32.319 T 14-09-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 AY555_RS08010 a62b3114792feb4bc0599cd24ab93e1a 303 SUPERFAMILY SSF52540 12 206 6.11E-40 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08010 a62b3114792feb4bc0599cd24ab93e1a 303 PANTHER PTHR11649:SF3 5 298 1.7E-112 T 14-09-2016 AY555_RS08010 a62b3114792feb4bc0599cd24ab93e1a 303 Gene3D G3DSA:3.40.50.300 5 176 1.1E-43 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08010 a62b3114792feb4bc0599cd24ab93e1a 303 Gene3D G3DSA:3.30.300.20 191 294 9.8E-36 T 14-09-2016 IPR015946 K homology domain-like, alpha/beta AY555_RS08010 a62b3114792feb4bc0599cd24ab93e1a 303 Pfam PF07650 KH domain 211 287 9.1E-18 T 14-09-2016 IPR004044 K Homology domain, type 2 GO:0003723 AY555_RS04455 7342ab2ae7537482d55e10cf3aa8516d 2781 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 2369 2443 4.0E-19 T 14-09-2016 IPR022385 Rhs repeat-associated core GO:0097264 AY555_RS04455 7342ab2ae7537482d55e10cf3aa8516d 2781 PANTHER PTHR11219 2244 2471 1.1E-46 T 14-09-2016 AY555_RS04455 7342ab2ae7537482d55e10cf3aa8516d 2781 Pfam PF05593 RHS Repeat 2017 2057 1.3E-4 T 14-09-2016 IPR031325 RHS repeat AY555_RS04455 7342ab2ae7537482d55e10cf3aa8516d 2781 PANTHER PTHR11219:SF51 2244 2471 1.1E-46 T 14-09-2016 AY555_RS03545 4af3c89bc247a4dd6ffb14bd1532bb6c 311 Pfam PF01012 Electron transfer flavoprotein domain 3 167 5.6E-35 T 14-09-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 AY555_RS03545 4af3c89bc247a4dd6ffb14bd1532bb6c 311 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 253 279 - T 14-09-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site AY555_RS03545 4af3c89bc247a4dd6ffb14bd1532bb6c 311 SUPERFAMILY SSF52467 189 308 2.62E-48 T 14-09-2016 IPR029035 DHS-like NAD/FAD-binding domain AY555_RS03545 4af3c89bc247a4dd6ffb14bd1532bb6c 311 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 272 4.4E-37 T 14-09-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal AY555_RS03545 4af3c89bc247a4dd6ffb14bd1532bb6c 311 SUPERFAMILY SSF52402 3 185 4.52E-52 T 14-09-2016 AY555_RS03545 4af3c89bc247a4dd6ffb14bd1532bb6c 311 PANTHER PTHR10909 104 305 3.2E-113 T 14-09-2016 AY555_RS03545 4af3c89bc247a4dd6ffb14bd1532bb6c 311 Gene3D G3DSA:3.40.50.1220 185 309 5.7E-62 T 14-09-2016 IPR029035 DHS-like NAD/FAD-binding domain AY555_RS03545 4af3c89bc247a4dd6ffb14bd1532bb6c 311 PIRSF PIRSF000089 1 311 2.6E-106 T 14-09-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 AY555_RS03545 4af3c89bc247a4dd6ffb14bd1532bb6c 311 SMART SM00893 3 182 4.5E-48 T 14-09-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 AY555_RS03545 4af3c89bc247a4dd6ffb14bd1532bb6c 311 Gene3D G3DSA:3.40.50.620 1 182 1.0E-57 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS03545 4af3c89bc247a4dd6ffb14bd1532bb6c 311 PANTHER PTHR10909:SF294 104 305 3.2E-113 T 14-09-2016 AY555_RS08725 24e11f56bd5b7253dfcda4a39a81b7bf 162 PANTHER PTHR10849 4 162 3.0E-116 T 14-09-2016 AY555_RS08725 24e11f56bd5b7253dfcda4a39a81b7bf 162 SUPERFAMILY SSF54862 36 146 3.01E-28 T 14-09-2016 AY555_RS08725 24e11f56bd5b7253dfcda4a39a81b7bf 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 63 74 - T 14-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AY555_RS08725 24e11f56bd5b7253dfcda4a39a81b7bf 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 102 113 - T 14-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AY555_RS08725 24e11f56bd5b7253dfcda4a39a81b7bf 162 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 10 146 29.393 T 14-09-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 AY555_RS08725 24e11f56bd5b7253dfcda4a39a81b7bf 162 Pfam PF12838 4Fe-4S dicluster domain 62 116 8.2E-13 T 14-09-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AY555_RS08725 24e11f56bd5b7253dfcda4a39a81b7bf 162 PANTHER PTHR10849:SF20 4 162 3.0E-116 T 14-09-2016 AY555_RS08725 24e11f56bd5b7253dfcda4a39a81b7bf 162 Gene3D G3DSA:1.10.1060.10 15 138 4.6E-24 T 14-09-2016 AY555_RS08725 24e11f56bd5b7253dfcda4a39a81b7bf 162 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 19 140 3.8E-53 T 14-09-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 AY555_RS08230 d2cca33af2472e4d3db4ce7a7d8dccb3 106 Gene3D G3DSA:4.10.520.10 5 96 2.1E-28 T 14-09-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AY555_RS08230 d2cca33af2472e4d3db4ce7a7d8dccb3 106 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 5 96 9.5E-42 T 14-09-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 AY555_RS08230 d2cca33af2472e4d3db4ce7a7d8dccb3 106 PANTHER PTHR33175 6 96 2.1E-44 T 14-09-2016 AY555_RS08230 d2cca33af2472e4d3db4ce7a7d8dccb3 106 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 4 100 27.695 T 14-09-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 AY555_RS08230 d2cca33af2472e4d3db4ce7a7d8dccb3 106 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 51 70 - T 14-09-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AY555_RS08230 d2cca33af2472e4d3db4ce7a7d8dccb3 106 SMART SM00411 6 95 1.4E-31 T 14-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AY555_RS08230 d2cca33af2472e4d3db4ce7a7d8dccb3 106 Pfam PF00216 Bacterial DNA-binding protein 7 95 1.3E-26 T 14-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AY555_RS08230 d2cca33af2472e4d3db4ce7a7d8dccb3 106 SUPERFAMILY SSF47729 6 96 9.71E-27 T 14-09-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AY555_RS08230 d2cca33af2472e4d3db4ce7a7d8dccb3 106 PRINTS PR01727 Prokaryotic integration host factor signature 45 60 2.5E-13 T 14-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AY555_RS08230 d2cca33af2472e4d3db4ce7a7d8dccb3 106 PRINTS PR01727 Prokaryotic integration host factor signature 79 93 2.5E-13 T 14-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AY555_RS08230 d2cca33af2472e4d3db4ce7a7d8dccb3 106 PRINTS PR01727 Prokaryotic integration host factor signature 63 76 2.5E-13 T 14-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AY555_RS08230 d2cca33af2472e4d3db4ce7a7d8dccb3 106 PANTHER PTHR33175:SF2 6 96 2.1E-44 T 14-09-2016 AY555_RS04575 251999fb6b6625596e850a71b3c67c58 324 PANTHER PTHR30477:SF1 13 109 5.7E-57 T 14-09-2016 AY555_RS04575 251999fb6b6625596e850a71b3c67c58 324 PANTHER PTHR30477:SF1 134 288 5.7E-57 T 14-09-2016 AY555_RS04575 251999fb6b6625596e850a71b3c67c58 324 PANTHER PTHR30477 13 109 5.7E-57 T 14-09-2016 AY555_RS04575 251999fb6b6625596e850a71b3c67c58 324 PANTHER PTHR30477 134 288 5.7E-57 T 14-09-2016 AY555_RS04575 251999fb6b6625596e850a71b3c67c58 324 Gene3D G3DSA:3.40.50.1980 205 316 3.0E-23 T 14-09-2016 AY555_RS04575 251999fb6b6625596e850a71b3c67c58 324 Pfam PF01297 Zinc-uptake complex component A periplasmic 30 314 3.7E-61 T 14-09-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AY555_RS04575 251999fb6b6625596e850a71b3c67c58 324 Gene3D G3DSA:3.40.50.1980 19 203 2.8E-46 T 14-09-2016 AY555_RS04575 251999fb6b6625596e850a71b3c67c58 324 SUPERFAMILY SSF53807 23 317 2.75E-73 T 14-09-2016 AY555_RS05000 90dde926e6b31c384809b641cc0c041d 354 Pfam PF02719 Polysaccharide biosynthesis protein 22 295 1.4E-94 T 14-09-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain AY555_RS05000 90dde926e6b31c384809b641cc0c041d 354 PANTHER PTHR10366 21 280 4.0E-106 T 14-09-2016 AY555_RS05000 90dde926e6b31c384809b641cc0c041d 354 Gene3D G3DSA:3.40.50.720 21 239 1.6E-43 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS05000 90dde926e6b31c384809b641cc0c041d 354 TIGRFAM TIGR03589 PseB: UDP-N-acetylglucosamine 4,6-dehydratase (inverting) 17 335 1.3E-144 T 14-09-2016 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) KEGG: 00010+4.2.1.11|KEGG: 00520+4.2.1.115|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6143|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|MetaCyc: PWY-7330|MetaCyc: PWY-7331|MetaCyc: PWY-7332|MetaCyc: PWY-7719 AY555_RS05000 90dde926e6b31c384809b641cc0c041d 354 PANTHER PTHR10366:SF360 21 280 4.0E-106 T 14-09-2016 AY555_RS05000 90dde926e6b31c384809b641cc0c041d 354 SUPERFAMILY SSF51735 21 280 1.34E-47 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS09605 94562dc51518f608afa4f564c5162acb 946 Gene3D G3DSA:1.10.287.560 256 316 8.6E-19 T 14-09-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AY555_RS09605 94562dc51518f608afa4f564c5162acb 946 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 419 3.6E-11 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS09605 94562dc51518f608afa4f564c5162acb 946 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 500 3.6E-11 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS09605 94562dc51518f608afa4f564c5162acb 946 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 481 3.6E-11 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS09605 94562dc51518f608afa4f564c5162acb 946 SUPERFAMILY SSF50341 502 648 8.63E-28 T 14-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AY555_RS09605 94562dc51518f608afa4f564c5162acb 946 SUPERFAMILY SSF52172 823 942 5.12E-31 T 14-09-2016 IPR011006 CheY-like superfamily AY555_RS09605 94562dc51518f608afa4f564c5162acb 946 SMART SM01231 255 315 1.2E-18 T 14-09-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AY555_RS09605 94562dc51518f608afa4f564c5162acb 946 Pfam PF01584 CheW-like domain 508 649 3.8E-21 T 14-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AY555_RS09605 94562dc51518f608afa4f564c5162acb 946 SUPERFAMILY SSF47384 256 316 1.8E-14 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS09605 94562dc51518f608afa4f564c5162acb 946 PANTHER PTHR22617 1 665 3.0E-204 T 14-09-2016 AY555_RS09605 94562dc51518f608afa4f564c5162acb 946 Gene3D G3DSA:3.40.50.2300 823 942 1.2E-32 T 14-09-2016 AY555_RS09605 94562dc51518f608afa4f564c5162acb 946 SMART SM00448 824 937 8.8E-31 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS09605 94562dc51518f608afa4f564c5162acb 946 Gene3D G3DSA:1.20.120.160 1 143 5.2E-38 T 14-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AY555_RS09605 94562dc51518f608afa4f564c5162acb 946 Gene3D G3DSA:2.40.50.180 699 757 2.5E-8 T 14-09-2016 AY555_RS09605 94562dc51518f608afa4f564c5162acb 946 Gene3D G3DSA:2.40.50.180 532 604 8.4E-13 T 14-09-2016 AY555_RS09605 94562dc51518f608afa4f564c5162acb 946 SMART SM00387 360 503 2.2E-20 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS09605 94562dc51518f608afa4f564c5162acb 946 SMART SM00260 495 649 2.7E-37 T 14-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AY555_RS09605 94562dc51518f608afa4f564c5162acb 946 SUPERFAMILY SSF55874 319 501 7.99E-36 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS09605 94562dc51518f608afa4f564c5162acb 946 Gene3D G3DSA:3.30.565.10 324 502 2.3E-32 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS09605 94562dc51518f608afa4f564c5162acb 946 SMART SM00073 1 98 2.5E-28 T 14-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AY555_RS09605 94562dc51518f608afa4f564c5162acb 946 SUPERFAMILY SSF50341 676 793 2.22E-13 T 14-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AY555_RS09605 94562dc51518f608afa4f564c5162acb 946 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 363 502 5.6E-16 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS09605 94562dc51518f608afa4f564c5162acb 946 SUPERFAMILY SSF47226 1 124 9.16E-31 T 14-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AY555_RS09605 94562dc51518f608afa4f564c5162acb 946 Pfam PF01627 Hpt domain 3 95 8.4E-16 T 14-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AY555_RS09605 94562dc51518f608afa4f564c5162acb 946 Gene3D G3DSA:2.30.30.40 503 524 2.4E-19 T 14-09-2016 AY555_RS09605 94562dc51518f608afa4f564c5162acb 946 Gene3D G3DSA:2.30.30.40 605 648 2.4E-19 T 14-09-2016 AY555_RS09605 94562dc51518f608afa4f564c5162acb 946 PANTHER PTHR22617:SF6 1 665 3.0E-204 T 14-09-2016 AY555_RS09605 94562dc51518f608afa4f564c5162acb 946 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 256 315 3.5E-14 T 14-09-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AY555_RS09605 94562dc51518f608afa4f564c5162acb 946 Pfam PF00072 Response regulator receiver domain 826 936 2.8E-21 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS01860 aeeb00c4dd3e18edd8055225a67d3b0f 153 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 10 151 42.654 T 14-09-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 AY555_RS01860 aeeb00c4dd3e18edd8055225a67d3b0f 153 Gene3D G3DSA:3.40.140.10 8 148 2.9E-50 T 14-09-2016 AY555_RS01860 aeeb00c4dd3e18edd8055225a67d3b0f 153 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 92 - T 14-09-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AY555_RS01860 aeeb00c4dd3e18edd8055225a67d3b0f 153 SUPERFAMILY SSF53927 9 151 1.12E-45 T 14-09-2016 IPR016193 Cytidine deaminase-like GO:0003824 AY555_RS01860 aeeb00c4dd3e18edd8055225a67d3b0f 153 Pfam PF14437 MafB19-like deaminase 10 151 8.5E-29 T 14-09-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 AY555_RS01860 aeeb00c4dd3e18edd8055225a67d3b0f 153 PANTHER PTHR11079 10 152 2.3E-37 T 14-09-2016 AY555_RS01860 aeeb00c4dd3e18edd8055225a67d3b0f 153 PANTHER PTHR11079:SF72 10 152 2.3E-37 T 14-09-2016 AY555_RS09940 67eab7104cf0c48b380326ebf0fefae2 316 Gene3D G3DSA:1.10.530.10 54 82 1.0E-8 T 14-09-2016 AY555_RS09940 67eab7104cf0c48b380326ebf0fefae2 316 Gene3D G3DSA:1.10.530.10 119 179 1.0E-8 T 14-09-2016 AY555_RS09940 67eab7104cf0c48b380326ebf0fefae2 316 SUPERFAMILY SSF53955 52 82 1.27E-10 T 14-09-2016 IPR023346 Lysozyme-like domain AY555_RS09940 67eab7104cf0c48b380326ebf0fefae2 316 SUPERFAMILY SSF53955 119 173 1.27E-10 T 14-09-2016 IPR023346 Lysozyme-like domain AY555_RS09940 67eab7104cf0c48b380326ebf0fefae2 316 Pfam PF01464 Transglycosylase SLT domain 53 173 2.9E-7 T 14-09-2016 IPR008258 Transglycosylase SLT domain 1 AY555_RS02660 e6f395455a1ae3c764849d9a2d86a0ed 229 Hamap MF_00238 Cytidylate kinase [cmk]. 5 218 30.73 T 14-09-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 AY555_RS02660 e6f395455a1ae3c764849d9a2d86a0ed 229 Gene3D G3DSA:3.40.50.300 4 215 1.0E-58 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS02660 e6f395455a1ae3c764849d9a2d86a0ed 229 Pfam PF02224 Cytidylate kinase 7 206 2.3E-55 T 14-09-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 AY555_RS02660 e6f395455a1ae3c764849d9a2d86a0ed 229 PANTHER PTHR21299 6 226 5.9E-44 T 14-09-2016 AY555_RS02660 e6f395455a1ae3c764849d9a2d86a0ed 229 SUPERFAMILY SSF52540 4 217 5.73E-36 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS02660 e6f395455a1ae3c764849d9a2d86a0ed 229 TIGRFAM TIGR00017 cmk: cytidylate kinase 5 204 2.4E-50 T 14-09-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 AY555_RS02560 31e1771a9b41a65768e025ed468efbee 165 Gene3D G3DSA:3.30.70.940 1 98 9.4E-14 T 14-09-2016 IPR006645 NusG, N-terminal GO:0006355 AY555_RS02560 31e1771a9b41a65768e025ed468efbee 165 PANTHER PTHR30265:SF3 1 165 2.1E-32 T 14-09-2016 AY555_RS02560 31e1771a9b41a65768e025ed468efbee 165 SUPERFAMILY SSF50104 110 164 2.41E-5 T 14-09-2016 IPR008991 Translation protein SH3-like domain AY555_RS02560 31e1771a9b41a65768e025ed468efbee 165 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 3 161 1.4E-50 T 14-09-2016 IPR010215 Transcription antitermination protein RfaH GO:0006355 AY555_RS02560 31e1771a9b41a65768e025ed468efbee 165 Pfam PF02357 Transcription termination factor nusG 1 95 1.7E-18 T 14-09-2016 IPR006645 NusG, N-terminal GO:0006355 AY555_RS02560 31e1771a9b41a65768e025ed468efbee 165 SUPERFAMILY SSF82679 1 102 3.27E-24 T 14-09-2016 IPR006645 NusG, N-terminal GO:0006355 AY555_RS02560 31e1771a9b41a65768e025ed468efbee 165 Gene3D G3DSA:2.30.30.30 108 163 5.9E-5 T 14-09-2016 IPR014722 Ribosomal protein L2 domain 2 AY555_RS02560 31e1771a9b41a65768e025ed468efbee 165 SMART SM00738 1 101 8.2E-16 T 14-09-2016 IPR006645 NusG, N-terminal GO:0006355 AY555_RS02560 31e1771a9b41a65768e025ed468efbee 165 PANTHER PTHR30265 1 165 2.1E-32 T 14-09-2016 AY555_RS02560 31e1771a9b41a65768e025ed468efbee 165 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 164 42.541 T 14-09-2016 IPR010215 Transcription antitermination protein RfaH GO:0006355 AY555_RS05855 a345177187cf25e68ce0dcc996e910dd 78 PANTHER PTHR13479 1 78 1.0E-27 T 14-09-2016 AY555_RS05855 a345177187cf25e68ce0dcc996e910dd 78 TIGRFAM TIGR00165 S18: ribosomal protein bS18 9 77 8.2E-32 T 14-09-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS05855 a345177187cf25e68ce0dcc996e910dd 78 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 7 78 22.08 T 14-09-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS05855 a345177187cf25e68ce0dcc996e910dd 78 ProSitePatterns PS00057 Ribosomal protein S18 signature. 26 49 - T 14-09-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS05855 a345177187cf25e68ce0dcc996e910dd 78 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 26 78 3.0E-21 T 14-09-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS05855 a345177187cf25e68ce0dcc996e910dd 78 Gene3D G3DSA:4.10.640.10 13 78 4.3E-32 T 14-09-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS05855 a345177187cf25e68ce0dcc996e910dd 78 SUPERFAMILY SSF46911 4 78 4.71E-29 T 14-09-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS05855 a345177187cf25e68ce0dcc996e910dd 78 Pfam PF01084 Ribosomal protein S18 25 73 3.5E-26 T 14-09-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS05855 a345177187cf25e68ce0dcc996e910dd 78 PRINTS PR00974 Ribosomal protein S18 family signature 33 43 9.9E-19 T 14-09-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS05855 a345177187cf25e68ce0dcc996e910dd 78 PRINTS PR00974 Ribosomal protein S18 family signature 51 65 9.9E-19 T 14-09-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS05855 a345177187cf25e68ce0dcc996e910dd 78 PRINTS PR00974 Ribosomal protein S18 family signature 65 75 9.9E-19 T 14-09-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS05855 a345177187cf25e68ce0dcc996e910dd 78 PRINTS PR00974 Ribosomal protein S18 family signature 43 50 9.9E-19 T 14-09-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS05800 34783b4fc0f06cb04c916d76608ea3f3 239 Gene3D G3DSA:3.40.190.10 97 188 3.8E-11 T 14-09-2016 AY555_RS05800 34783b4fc0f06cb04c916d76608ea3f3 239 SUPERFAMILY SSF53850 20 232 5.79E-35 T 14-09-2016 AY555_RS05800 34783b4fc0f06cb04c916d76608ea3f3 239 PANTHER PTHR38834 20 231 3.8E-42 T 14-09-2016 AY555_RS05800 34783b4fc0f06cb04c916d76608ea3f3 239 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 232 4.3E-24 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AY555_RS05800 34783b4fc0f06cb04c916d76608ea3f3 239 Gene3D G3DSA:3.40.190.10 26 96 1.1E-14 T 14-09-2016 AY555_RS05800 34783b4fc0f06cb04c916d76608ea3f3 239 Gene3D G3DSA:3.40.190.10 196 232 1.1E-14 T 14-09-2016 AY555_RS05800 34783b4fc0f06cb04c916d76608ea3f3 239 SMART SM00062 22 238 3.5E-4 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AY555_RS06690 8ce7a536ffa2f05c3b32482494543cbe 393 Gene3D G3DSA:1.10.3720.10 83 154 5.5E-45 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS06690 8ce7a536ffa2f05c3b32482494543cbe 393 Gene3D G3DSA:1.10.3720.10 259 386 5.5E-45 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS06690 8ce7a536ffa2f05c3b32482494543cbe 393 PANTHER PTHR30085 13 172 1.4E-141 T 14-09-2016 AY555_RS06690 8ce7a536ffa2f05c3b32482494543cbe 393 PANTHER PTHR30085 251 392 1.4E-141 T 14-09-2016 AY555_RS06690 8ce7a536ffa2f05c3b32482494543cbe 393 PANTHER PTHR30085:SF1 251 392 1.4E-141 T 14-09-2016 AY555_RS06690 8ce7a536ffa2f05c3b32482494543cbe 393 SUPERFAMILY SSF161098 185 373 2.35E-25 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS06690 8ce7a536ffa2f05c3b32482494543cbe 393 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 261 385 2.5E-13 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS06690 8ce7a536ffa2f05c3b32482494543cbe 393 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 82 147 1.5E-16 T 14-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AY555_RS06690 8ce7a536ffa2f05c3b32482494543cbe 393 SUPERFAMILY SSF161098 84 206 3.01E-12 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS06690 8ce7a536ffa2f05c3b32482494543cbe 393 PANTHER PTHR30085:SF1 13 172 1.4E-141 T 14-09-2016 AY555_RS09535 fb57b547e5bac743fce6b3060c48be6d 439 Pfam PF00206 Lyase 17 291 1.3E-57 T 14-09-2016 IPR022761 Fumarate lyase, N-terminal AY555_RS09535 fb57b547e5bac743fce6b3060c48be6d 439 PANTHER PTHR11444 4 429 4.4E-147 T 14-09-2016 IPR000362 Fumarate lyase family AY555_RS09535 fb57b547e5bac743fce6b3060c48be6d 439 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 2 434 4.3E-158 T 14-09-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 AY555_RS09535 fb57b547e5bac743fce6b3060c48be6d 439 SMART SM00998 354 434 5.7E-37 T 14-09-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 AY555_RS09535 fb57b547e5bac743fce6b3060c48be6d 439 PANTHER PTHR11444:SF2 4 429 4.4E-147 T 14-09-2016 AY555_RS09535 fb57b547e5bac743fce6b3060c48be6d 439 PRINTS PR00145 Argininosuccinate lyase family signature 221 245 2.2E-7 T 14-09-2016 AY555_RS09535 fb57b547e5bac743fce6b3060c48be6d 439 PRINTS PR00145 Argininosuccinate lyase family signature 133 153 2.2E-7 T 14-09-2016 AY555_RS09535 fb57b547e5bac743fce6b3060c48be6d 439 PRINTS PR00145 Argininosuccinate lyase family signature 266 282 2.2E-7 T 14-09-2016 AY555_RS09535 fb57b547e5bac743fce6b3060c48be6d 439 Gene3D G3DSA:1.10.40.30 362 434 6.6E-34 T 14-09-2016 AY555_RS09535 fb57b547e5bac743fce6b3060c48be6d 439 Gene3D G3DSA:1.20.200.10 96 361 3.1E-89 T 14-09-2016 AY555_RS09535 fb57b547e5bac743fce6b3060c48be6d 439 Pfam PF10397 Adenylosuccinate lyase C-terminus 355 433 2.4E-26 T 14-09-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 AY555_RS09535 fb57b547e5bac743fce6b3060c48be6d 439 SUPERFAMILY SSF48557 3 434 7.07E-131 T 14-09-2016 IPR008948 L-Aspartase-like GO:0003824 AY555_RS09535 fb57b547e5bac743fce6b3060c48be6d 439 Gene3D G3DSA:1.10.275.10 2 95 5.4E-28 T 14-09-2016 IPR024083 Fumarase/histidase, N-terminal AY555_RS09535 fb57b547e5bac743fce6b3060c48be6d 439 ProSitePatterns PS00163 Fumarate lyases signature. 266 275 - T 14-09-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 AY555_RS09535 fb57b547e5bac743fce6b3060c48be6d 439 PRINTS PR00149 Fumarate lyase superfamily signature 221 248 3.8E-26 T 14-09-2016 IPR000362 Fumarate lyase family AY555_RS09535 fb57b547e5bac743fce6b3060c48be6d 439 PRINTS PR00149 Fumarate lyase superfamily signature 93 111 3.8E-26 T 14-09-2016 IPR000362 Fumarate lyase family AY555_RS09535 fb57b547e5bac743fce6b3060c48be6d 439 PRINTS PR00149 Fumarate lyase superfamily signature 138 156 3.8E-26 T 14-09-2016 IPR000362 Fumarate lyase family AY555_RS09535 fb57b547e5bac743fce6b3060c48be6d 439 PRINTS PR00149 Fumarate lyase superfamily signature 266 282 3.8E-26 T 14-09-2016 IPR000362 Fumarate lyase family AY555_RS08090 f0ce551c2191640d1bd812ff14b78df6 432 SUPERFAMILY SSF52777 206 432 3.91E-87 T 14-09-2016 AY555_RS08090 f0ce551c2191640d1bd812ff14b78df6 432 SUPERFAMILY SSF51230 1 96 7.66E-28 T 14-09-2016 IPR011053 Single hybrid motif AY555_RS08090 f0ce551c2191640d1bd812ff14b78df6 432 Pfam PF00364 Biotin-requiring enzyme 4 76 3.0E-19 T 14-09-2016 IPR000089 Biotin/lipoyl attachment AY555_RS08090 f0ce551c2191640d1bd812ff14b78df6 432 Gene3D G3DSA:2.40.50.100 1 93 1.9E-33 T 14-09-2016 AY555_RS08090 f0ce551c2191640d1bd812ff14b78df6 432 Pfam PF02817 e3 binding domain 132 167 4.3E-15 T 14-09-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 AY555_RS08090 f0ce551c2191640d1bd812ff14b78df6 432 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 205 432 1.6E-87 T 14-09-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 AY555_RS08090 f0ce551c2191640d1bd812ff14b78df6 432 PANTHER PTHR23151:SF9 189 432 2.8E-207 T 14-09-2016 AY555_RS08090 f0ce551c2191640d1bd812ff14b78df6 432 PANTHER PTHR23151:SF9 3 173 2.8E-207 T 14-09-2016 AY555_RS08090 f0ce551c2191640d1bd812ff14b78df6 432 PANTHER PTHR23151 189 432 2.8E-207 T 14-09-2016 AY555_RS08090 f0ce551c2191640d1bd812ff14b78df6 432 PANTHER PTHR23151 3 173 2.8E-207 T 14-09-2016 AY555_RS08090 f0ce551c2191640d1bd812ff14b78df6 432 Gene3D G3DSA:4.10.320.10 130 176 3.0E-18 T 14-09-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 AY555_RS08090 f0ce551c2191640d1bd812ff14b78df6 432 SUPERFAMILY SSF47005 128 171 1.96E-11 T 14-09-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 AY555_RS08090 f0ce551c2191640d1bd812ff14b78df6 432 Gene3D G3DSA:3.30.559.10 207 431 2.4E-93 T 14-09-2016 IPR023213 Chloramphenicol acetyltransferase-like domain AY555_RS08090 f0ce551c2191640d1bd812ff14b78df6 432 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 14-09-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AY555_RS08090 f0ce551c2191640d1bd812ff14b78df6 432 TIGRFAM TIGR01349 PDHac_trf_mito: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 4 432 1.6E-169 T 14-09-2016 IPR006257 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex GO:0004742|GO:0006090|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 AY555_RS00135 2559c0555e78c52c4056668891e783ff 399 Gene3D G3DSA:2.30.330.10 328 397 1.0E-10 T 14-09-2016 AY555_RS00135 2559c0555e78c52c4056668891e783ff 399 SUPERFAMILY SSF101801 322 398 6.93E-14 T 14-09-2016 IPR001543 Surface presentation of antigen (SpoA) AY555_RS00135 2559c0555e78c52c4056668891e783ff 399 SUPERFAMILY SSF103039 119 302 6.02E-10 T 14-09-2016 IPR028976 CheC-like domain AY555_RS00135 2559c0555e78c52c4056668891e783ff 399 PANTHER PTHR30034:SF0 80 399 1.9E-97 T 14-09-2016 AY555_RS00135 2559c0555e78c52c4056668891e783ff 399 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 325 394 1.0E-19 T 14-09-2016 IPR001543 Surface presentation of antigen (SpoA) AY555_RS00135 2559c0555e78c52c4056668891e783ff 399 PRINTS PR00955 Flagellar motor switch protein FliM signature 284 302 6.7E-23 T 14-09-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AY555_RS00135 2559c0555e78c52c4056668891e783ff 399 PRINTS PR00955 Flagellar motor switch protein FliM signature 81 94 6.7E-23 T 14-09-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AY555_RS00135 2559c0555e78c52c4056668891e783ff 399 PRINTS PR00955 Flagellar motor switch protein FliM signature 160 176 6.7E-23 T 14-09-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AY555_RS00135 2559c0555e78c52c4056668891e783ff 399 PRINTS PR00955 Flagellar motor switch protein FliM signature 185 204 6.7E-23 T 14-09-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AY555_RS00135 2559c0555e78c52c4056668891e783ff 399 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 82 394 1.4E-95 T 14-09-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AY555_RS00135 2559c0555e78c52c4056668891e783ff 399 Pfam PF02154 Flagellar motor switch protein FliM 112 302 2.2E-65 T 14-09-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AY555_RS00135 2559c0555e78c52c4056668891e783ff 399 PANTHER PTHR30034 80 399 1.9E-97 T 14-09-2016 AY555_RS00960 860aae1a52ef7c9ece1c9899a06402b4 205 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 16 202 8.5E-67 T 14-09-2016 IPR013005 50S ribosomal protein uL4 AY555_RS00960 860aae1a52ef7c9ece1c9899a06402b4 205 PANTHER PTHR10746 1 204 5.2E-89 T 14-09-2016 IPR013005 50S ribosomal protein uL4 AY555_RS00960 860aae1a52ef7c9ece1c9899a06402b4 205 Pfam PF00573 Ribosomal protein L4/L1 family 16 203 3.3E-62 T 14-09-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 AY555_RS00960 860aae1a52ef7c9ece1c9899a06402b4 205 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 205 31.494 T 14-09-2016 IPR013005 50S ribosomal protein uL4 AY555_RS00960 860aae1a52ef7c9ece1c9899a06402b4 205 Gene3D G3DSA:3.40.1370.10 57 205 3.4E-54 T 14-09-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 AY555_RS00960 860aae1a52ef7c9ece1c9899a06402b4 205 SUPERFAMILY SSF52166 1 204 6.67E-68 T 14-09-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 AY555_RS07175 525459d315f93bef7e1cb423682a3c37 158 Pfam PF01592 NifU-like N terminal domain 32 99 1.7E-4 T 14-09-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 AY555_RS07175 525459d315f93bef7e1cb423682a3c37 158 SUPERFAMILY SSF82649 6 149 7.33E-24 T 14-09-2016 AY555_RS07175 525459d315f93bef7e1cb423682a3c37 158 Gene3D G3DSA:3.90.1010.10 33 153 1.1E-9 T 14-09-2016 AY555_RS05025 5e2af070ee2d576773117fed12ec2c59 604 Gene3D G3DSA:2.60.120.10 8 126 2.4E-12 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AY555_RS05025 5e2af070ee2d576773117fed12ec2c59 604 SMART SM00116 152 199 24.0 T 14-09-2016 IPR000644 CBS domain AY555_RS05025 5e2af070ee2d576773117fed12ec2c59 604 SMART SM00116 216 263 9.4E-6 T 14-09-2016 IPR000644 CBS domain AY555_RS05025 5e2af070ee2d576773117fed12ec2c59 604 SUPERFAMILY SSF54631 144 264 1.52E-22 T 14-09-2016 AY555_RS05025 5e2af070ee2d576773117fed12ec2c59 604 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 456 597 1.4E-34 T 14-09-2016 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding AY555_RS05025 5e2af070ee2d576773117fed12ec2c59 604 Pfam PF00571 CBS domain 218 262 4.5E-6 T 14-09-2016 IPR000644 CBS domain AY555_RS05025 5e2af070ee2d576773117fed12ec2c59 604 Pfam PF03445 Putative nucleotidyltransferase DUF294 289 418 3.5E-39 T 14-09-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 AY555_RS05025 5e2af070ee2d576773117fed12ec2c59 604 Gene3D G3DSA:3.10.580.10 144 263 1.5E-20 T 14-09-2016 AY555_RS05025 5e2af070ee2d576773117fed12ec2c59 604 PANTHER PTHR11911 142 280 1.1E-15 T 14-09-2016 AY555_RS05025 5e2af070ee2d576773117fed12ec2c59 604 SUPERFAMILY SSF51206 8 128 3.93E-17 T 14-09-2016 IPR018490 Cyclic nucleotide-binding-like AY555_RS05025 5e2af070ee2d576773117fed12ec2c59 604 Pfam PF00027 Cyclic nucleotide-binding domain 30 110 9.5E-11 T 14-09-2016 IPR000595 Cyclic nucleotide-binding domain AY555_RS04580 ea9f3bef8884e41d494f967d75b57cd0 165 PANTHER PTHR33202 4 156 2.8E-56 T 14-09-2016 AY555_RS04580 ea9f3bef8884e41d494f967d75b57cd0 165 PANTHER PTHR33202:SF6 4 156 2.8E-56 T 14-09-2016 AY555_RS04580 ea9f3bef8884e41d494f967d75b57cd0 165 Pfam PF01475 Ferric uptake regulator family 29 147 9.8E-11 T 14-09-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AY555_RS04580 ea9f3bef8884e41d494f967d75b57cd0 165 Gene3D G3DSA:1.10.10.10 20 89 6.0E-13 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS04580 ea9f3bef8884e41d494f967d75b57cd0 165 SUPERFAMILY SSF46785 21 155 3.99E-29 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS09575 2b86f6690fc267534efeefe41c02f4c3 1496 Gene3D G3DSA:2.40.128.130 1178 1496 1.8E-53 T 14-09-2016 IPR005546 Autotransporter beta-domain AY555_RS09575 2b86f6690fc267534efeefe41c02f4c3 1496 SMART SM00869 1219 1486 3.6E-44 T 14-09-2016 IPR005546 Autotransporter beta-domain AY555_RS09575 2b86f6690fc267534efeefe41c02f4c3 1496 SUPERFAMILY SSF103515 1176 1496 6.41E-52 T 14-09-2016 IPR005546 Autotransporter beta-domain AY555_RS09575 2b86f6690fc267534efeefe41c02f4c3 1496 Pfam PF03797 Autotransporter beta-domain 1217 1482 3.1E-47 T 14-09-2016 IPR005546 Autotransporter beta-domain AY555_RS09575 2b86f6690fc267534efeefe41c02f4c3 1496 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 1156 1496 4.2E-26 T 14-09-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 AY555_RS07290 84fb8f05e3fce95877e135d390099db5 596 Pfam PF02080 TrkA-C domain 418 480 7.4E-8 T 14-09-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AY555_RS07290 84fb8f05e3fce95877e135d390099db5 596 PANTHER PTHR32507 1 569 3.2E-168 T 14-09-2016 AY555_RS07290 84fb8f05e3fce95877e135d390099db5 596 Gene3D G3DSA:3.30.465.10 498 568 4.2E-5 T 14-09-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AY555_RS07290 84fb8f05e3fce95877e135d390099db5 596 Pfam PF00999 Sodium/hydrogen exchanger family 14 386 6.9E-49 T 14-09-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AY555_RS07290 84fb8f05e3fce95877e135d390099db5 596 SUPERFAMILY SSF56176 497 568 7.63E-5 T 14-09-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AY555_RS07290 84fb8f05e3fce95877e135d390099db5 596 PANTHER PTHR32507:SF7 1 569 3.2E-168 T 14-09-2016 IPR030151 K(+)/H(+) antiporter NhaP GO:0005451|GO:0006813|GO:0016021 AY555_RS07290 84fb8f05e3fce95877e135d390099db5 596 SUPERFAMILY SSF116726 412 480 2.22E-7 T 14-09-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AY555_RS07290 84fb8f05e3fce95877e135d390099db5 596 Gene3D G3DSA:3.30.70.1450 415 481 8.3E-4 T 14-09-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AY555_RS07290 84fb8f05e3fce95877e135d390099db5 596 Pfam PF03471 Transporter associated domain 497 569 5.3E-6 T 14-09-2016 IPR005170 Transporter-associated domain AY555_RS07290 84fb8f05e3fce95877e135d390099db5 596 SMART SM01091 492 571 9.6E-5 T 14-09-2016 IPR005170 Transporter-associated domain AY555_RS05875 87c2dcf9da81b712d537393dc9c8eb3a 78 Gene3D G3DSA:1.10.1200.10 3 76 5.1E-34 T 14-09-2016 IPR009081 Phosphopantetheine binding ACP domain AY555_RS05875 87c2dcf9da81b712d537393dc9c8eb3a 78 PANTHER PTHR20863 4 76 6.7E-30 T 14-09-2016 AY555_RS05875 87c2dcf9da81b712d537393dc9c8eb3a 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 4.7E-33 T 14-09-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 AY555_RS05875 87c2dcf9da81b712d537393dc9c8eb3a 78 Pfam PF00550 Phosphopantetheine attachment site 6 72 1.2E-14 T 14-09-2016 IPR009081 Phosphopantetheine binding ACP domain AY555_RS05875 87c2dcf9da81b712d537393dc9c8eb3a 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 34 73 2.0E-12 T 14-09-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 AY555_RS05875 87c2dcf9da81b712d537393dc9c8eb3a 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.527 T 14-09-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 AY555_RS05875 87c2dcf9da81b712d537393dc9c8eb3a 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 14-09-2016 IPR006162 Phosphopantetheine attachment site AY555_RS05875 87c2dcf9da81b712d537393dc9c8eb3a 78 SUPERFAMILY SSF47336 2 76 2.75E-22 T 14-09-2016 IPR009081 Phosphopantetheine binding ACP domain AY555_RS05165 e4ec9df11de476e0efae52cf710d1171 391 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 276 294 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05165 e4ec9df11de476e0efae52cf710d1171 391 SUPERFAMILY SSF51120 2 132 4.45E-17 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05165 e4ec9df11de476e0efae52cf710d1171 391 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 253 264 25.0 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05165 e4ec9df11de476e0efae52cf710d1171 391 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 72 89 0.06 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05165 e4ec9df11de476e0efae52cf710d1171 391 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 279 296 0.067 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05165 e4ec9df11de476e0efae52cf710d1171 391 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2 16 2.0 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05165 e4ec9df11de476e0efae52cf710d1171 391 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 54 70 0.83 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05165 e4ec9df11de476e0efae52cf710d1171 391 SUPERFAMILY SSF51120 247 388 1.06E-17 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05165 e4ec9df11de476e0efae52cf710d1171 391 Pfam PF08548 Peptidase M10 serralysin C terminal 50 181 1.6E-5 T 14-09-2016 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 AY555_RS05165 e4ec9df11de476e0efae52cf710d1171 391 Pfam PF08548 Peptidase M10 serralysin C terminal 251 388 2.7E-5 T 14-09-2016 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 AY555_RS05165 e4ec9df11de476e0efae52cf710d1171 391 Gene3D G3DSA:2.150.10.10 229 341 7.8E-23 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05165 e4ec9df11de476e0efae52cf710d1171 391 Gene3D G3DSA:2.150.10.10 54 122 7.8E-23 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05165 e4ec9df11de476e0efae52cf710d1171 391 PRINTS PR00313 NodO calcium binding signature 289 298 5.4E-9 T 14-09-2016 AY555_RS05165 e4ec9df11de476e0efae52cf710d1171 391 PRINTS PR00313 NodO calcium binding signature 280 288 5.4E-9 T 14-09-2016 AY555_RS05165 e4ec9df11de476e0efae52cf710d1171 391 PRINTS PR00313 NodO calcium binding signature 52 63 5.4E-9 T 14-09-2016 AY555_RS05165 e4ec9df11de476e0efae52cf710d1171 391 PRINTS PR00313 NodO calcium binding signature 253 261 5.4E-9 T 14-09-2016 AY555_RS02000 9fb7e97f8163f6ecf622f5e14d3649cb 118 PANTHER PTHR21043 1 98 4.0E-35 T 14-09-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AY555_RS02000 9fb7e97f8163f6ecf622f5e14d3649cb 118 SUPERFAMILY SSF81301 2 99 6.05E-33 T 14-09-2016 AY555_RS02000 9fb7e97f8163f6ecf622f5e14d3649cb 118 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 2 95 1.5E-32 T 14-09-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AY555_RS02000 9fb7e97f8163f6ecf622f5e14d3649cb 118 Pfam PF02410 Ribosomal silencing factor during starvation 4 95 7.5E-26 T 14-09-2016 AY555_RS02000 9fb7e97f8163f6ecf622f5e14d3649cb 118 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 1 96 21.067 T 14-09-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AY555_RS02000 9fb7e97f8163f6ecf622f5e14d3649cb 118 Gene3D G3DSA:3.30.460.10 3 96 2.6E-32 T 14-09-2016 AY555_RS02025 370d47e542bec9e2b045acf5aa27129d 485 PANTHER PTHR24423 6 12 1.0E-37 T 14-09-2016 AY555_RS02025 370d47e542bec9e2b045acf5aa27129d 485 PANTHER PTHR24423:SF496 6 12 1.0E-37 T 14-09-2016 AY555_RS02025 370d47e542bec9e2b045acf5aa27129d 485 PANTHER PTHR24423:SF496 189 460 1.0E-37 T 14-09-2016 AY555_RS02025 370d47e542bec9e2b045acf5aa27129d 485 SMART SM00387 350 458 4.7E-19 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS02025 370d47e542bec9e2b045acf5aa27129d 485 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 351 441 9.2E-12 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS02025 370d47e542bec9e2b045acf5aa27129d 485 PANTHER PTHR24423 189 460 1.0E-37 T 14-09-2016 AY555_RS02025 370d47e542bec9e2b045acf5aa27129d 485 SUPERFAMILY SSF47384 243 304 4.51E-6 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS02025 370d47e542bec9e2b045acf5aa27129d 485 Gene3D G3DSA:1.10.287.130 245 301 3.9E-5 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS02025 370d47e542bec9e2b045acf5aa27129d 485 SUPERFAMILY SSF55874 320 458 1.01E-24 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS02025 370d47e542bec9e2b045acf5aa27129d 485 Gene3D G3DSA:3.30.565.10 327 457 9.0E-24 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS02025 370d47e542bec9e2b045acf5aa27129d 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 400 3.7E-7 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS02025 370d47e542bec9e2b045acf5aa27129d 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 435 3.7E-7 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS05105 bba486924ccded586d7bfcc51267aba3 426 Gene3D G3DSA:3.30.470.20 189 325 1.5E-58 T 14-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AY555_RS05105 bba486924ccded586d7bfcc51267aba3 426 SUPERFAMILY SSF56059 102 323 4.77E-62 T 14-09-2016 AY555_RS05105 bba486924ccded586d7bfcc51267aba3 426 SUPERFAMILY SSF51246 325 421 8.37E-29 T 14-09-2016 IPR011054 Rudiment single hybrid motif AY555_RS05105 bba486924ccded586d7bfcc51267aba3 426 Gene3D G3DSA:3.30.1490.20 120 188 6.1E-27 T 14-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AY555_RS05105 bba486924ccded586d7bfcc51267aba3 426 PANTHER PTHR10520 1 426 4.6E-250 T 14-09-2016 AY555_RS05105 bba486924ccded586d7bfcc51267aba3 426 Gene3D G3DSA:3.40.50.20 2 93 2.1E-36 T 14-09-2016 IPR016185 Pre-ATP-grasp domain AY555_RS05105 bba486924ccded586d7bfcc51267aba3 426 Gene3D G3DSA:3.90.600.10 327 420 1.8E-32 T 14-09-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AY555_RS05105 bba486924ccded586d7bfcc51267aba3 426 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 328 419 9.0E-25 T 14-09-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AY555_RS05105 bba486924ccded586d7bfcc51267aba3 426 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 421 41.559 T 14-09-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AY555_RS05105 bba486924ccded586d7bfcc51267aba3 426 SMART SM01209 101 293 5.5E-126 T 14-09-2016 AY555_RS05105 bba486924ccded586d7bfcc51267aba3 426 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 2.7E-34 T 14-09-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AY555_RS05105 bba486924ccded586d7bfcc51267aba3 426 SUPERFAMILY SSF52440 1 101 7.48E-34 T 14-09-2016 IPR016185 Pre-ATP-grasp domain AY555_RS05105 bba486924ccded586d7bfcc51267aba3 426 SMART SM01210 327 421 1.2E-47 T 14-09-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AY555_RS05105 bba486924ccded586d7bfcc51267aba3 426 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 421 1.8E-163 T 14-09-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AY555_RS05105 bba486924ccded586d7bfcc51267aba3 426 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 287 294 - T 14-09-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AY555_RS05105 bba486924ccded586d7bfcc51267aba3 426 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 293 1.9E-78 T 14-09-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AY555_RS07985 df27e5f7b80003a56b8cbfeee4cd0b04 329 SUPERFAMILY SSF56925 19 204 3.4E-30 T 14-09-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AY555_RS07985 df27e5f7b80003a56b8cbfeee4cd0b04 329 Pfam PF00691 OmpA family 227 322 1.8E-22 T 14-09-2016 IPR006665 OmpA-like domain AY555_RS07985 df27e5f7b80003a56b8cbfeee4cd0b04 329 Gene3D G3DSA:2.40.160.20 7 218 2.8E-30 T 14-09-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AY555_RS07985 df27e5f7b80003a56b8cbfeee4cd0b04 329 PRINTS PR01021 OMPA domain signature 228 250 3.2E-16 T 14-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AY555_RS07985 df27e5f7b80003a56b8cbfeee4cd0b04 329 PRINTS PR01021 OMPA domain signature 273 289 3.2E-16 T 14-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AY555_RS07985 df27e5f7b80003a56b8cbfeee4cd0b04 329 PRINTS PR01021 OMPA domain signature 258 273 3.2E-16 T 14-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AY555_RS07985 df27e5f7b80003a56b8cbfeee4cd0b04 329 SUPERFAMILY SSF103088 214 328 5.23E-31 T 14-09-2016 IPR006665 OmpA-like domain AY555_RS07985 df27e5f7b80003a56b8cbfeee4cd0b04 329 Gene3D G3DSA:3.30.1330.60 226 328 2.7E-32 T 14-09-2016 IPR006665 OmpA-like domain AY555_RS07985 df27e5f7b80003a56b8cbfeee4cd0b04 329 PANTHER PTHR30128 119 328 2.1E-31 T 14-09-2016 AY555_RS07985 df27e5f7b80003a56b8cbfeee4cd0b04 329 Pfam PF13505 Outer membrane protein beta-barrel domain 6 202 6.5E-20 T 14-09-2016 IPR027385 Outer membrane protein beta-barrel AY555_RS07390 f57aff967a165aaf19ddbca20689454f 260 PANTHER PTHR10108:SF855 48 242 2.2E-16 T 14-09-2016 AY555_RS07390 f57aff967a165aaf19ddbca20689454f 260 Gene3D G3DSA:3.40.50.150 24 216 6.1E-27 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS07390 f57aff967a165aaf19ddbca20689454f 260 Pfam PF13649 Methyltransferase domain 49 143 1.2E-12 T 14-09-2016 AY555_RS07390 f57aff967a165aaf19ddbca20689454f 260 PANTHER PTHR10108 48 242 2.2E-16 T 14-09-2016 AY555_RS07390 f57aff967a165aaf19ddbca20689454f 260 SUPERFAMILY SSF53335 42 256 9.91E-31 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS06215 1d12cb23d7f826290577a802c947f757 261 SUPERFAMILY SSF53850 25 261 1.89E-82 T 14-09-2016 AY555_RS06215 1d12cb23d7f826290577a802c947f757 261 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 8 260 1.4E-76 T 14-09-2016 IPR004872 Lipoprotein NlpA family AY555_RS06215 1d12cb23d7f826290577a802c947f757 261 Gene3D G3DSA:3.40.190.10 23 152 2.0E-49 T 14-09-2016 AY555_RS06215 1d12cb23d7f826290577a802c947f757 261 PIRSF PIRSF002854 1 261 3.5E-98 T 14-09-2016 IPR004872 Lipoprotein NlpA family AY555_RS06215 1d12cb23d7f826290577a802c947f757 261 PANTHER PTHR30429 1 261 2.9E-116 T 14-09-2016 IPR004872 Lipoprotein NlpA family AY555_RS06215 1d12cb23d7f826290577a802c947f757 261 Pfam PF03180 NLPA lipoprotein 26 261 4.0E-91 T 14-09-2016 IPR004872 Lipoprotein NlpA family AY555_RS04345 8a6691a822d45c6c6b0be0af63cc5bb3 228 Gene3D G3DSA:3.40.50.150 48 129 2.0E-8 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS04345 8a6691a822d45c6c6b0be0af63cc5bb3 228 SUPERFAMILY SSF53335 48 127 5.25E-10 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS04345 8a6691a822d45c6c6b0be0af63cc5bb3 228 Pfam PF13649 Methyltransferase domain 78 137 1.8E-6 T 14-09-2016 AY555_RS05635 0945b747cba57b7b3f633aace044f168 287 Gene3D G3DSA:3.30.420.10 102 261 2.3E-19 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AY555_RS05635 0945b747cba57b7b3f633aace044f168 287 Pfam PF00665 Integrase core domain 104 226 1.6E-14 T 14-09-2016 IPR001584 Integrase, catalytic core GO:0015074 AY555_RS05635 0945b747cba57b7b3f633aace044f168 287 SUPERFAMILY SSF53098 102 261 2.02E-18 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AY555_RS08255 f31134f1bddf500cfbf12cb4c8e32f5d 266 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 191 208 - T 14-09-2016 IPR000540 Flagellar motor protein MotA, conserved site AY555_RS08255 f31134f1bddf500cfbf12cb4c8e32f5d 266 PANTHER PTHR30433:SF2 3 253 6.4E-60 T 14-09-2016 IPR022522 Flagellar motor stator, MotA AY555_RS08255 f31134f1bddf500cfbf12cb4c8e32f5d 266 PANTHER PTHR30433 3 253 6.4E-60 T 14-09-2016 AY555_RS08255 f31134f1bddf500cfbf12cb4c8e32f5d 266 Pfam PF01618 MotA/TolQ/ExbB proton channel family 128 218 1.6E-19 T 14-09-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AY555_RS06065 a7670b75aabed0d70315d7afce2e7363 700 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 22 692 1.8E-229 T 14-09-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AY555_RS06065 a7670b75aabed0d70315d7afce2e7363 700 SUPERFAMILY SSF56091 8 325 2.7E-113 T 14-09-2016 AY555_RS06065 a7670b75aabed0d70315d7afce2e7363 700 SUPERFAMILY SSF52113 623 697 3.74E-17 T 14-09-2016 IPR001357 BRCT domain AY555_RS06065 a7670b75aabed0d70315d7afce2e7363 700 Gene3D G3DSA:3.40.50.10190 623 697 4.0E-22 T 14-09-2016 IPR001357 BRCT domain AY555_RS06065 a7670b75aabed0d70315d7afce2e7363 700 SMART SM00292 622 699 1.8E-11 T 14-09-2016 IPR001357 BRCT domain AY555_RS06065 a7670b75aabed0d70315d7afce2e7363 700 SUPERFAMILY SSF50249 327 410 5.48E-28 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS06065 a7670b75aabed0d70315d7afce2e7363 700 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 11 326 1.5E-116 T 14-09-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 AY555_RS06065 a7670b75aabed0d70315d7afce2e7363 700 Hamap MF_01588 DNA ligase [ligA]. 10 696 50.691 T 14-09-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AY555_RS06065 a7670b75aabed0d70315d7afce2e7363 700 PIRSF PIRSF001604 4 700 1.4E-231 T 14-09-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AY555_RS06065 a7670b75aabed0d70315d7afce2e7363 700 Pfam PF12826 Helix-hairpin-helix motif 525 555 1.1E-8 T 14-09-2016 AY555_RS06065 a7670b75aabed0d70315d7afce2e7363 700 SMART SM00532 11 457 2.8E-248 T 14-09-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 AY555_RS06065 a7670b75aabed0d70315d7afce2e7363 700 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 330 407 8.1E-35 T 14-09-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 AY555_RS06065 a7670b75aabed0d70315d7afce2e7363 700 Gene3D G3DSA:1.10.150.20 444 517 2.6E-21 T 14-09-2016 AY555_RS06065 a7670b75aabed0d70315d7afce2e7363 700 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 627 695 2.5E-9 T 14-09-2016 IPR001357 BRCT domain AY555_RS06065 a7670b75aabed0d70315d7afce2e7363 700 PANTHER PTHR23389:SF9 9 548 8.9E-181 T 14-09-2016 AY555_RS06065 a7670b75aabed0d70315d7afce2e7363 700 SUPERFAMILY SSF47781 412 608 4.08E-46 T 14-09-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 AY555_RS06065 a7670b75aabed0d70315d7afce2e7363 700 Gene3D G3DSA:1.10.150.20 519 608 3.1E-22 T 14-09-2016 AY555_RS06065 a7670b75aabed0d70315d7afce2e7363 700 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 340 355 - T 14-09-2016 IPR033136 NAD-dependent DNA ligase, conserved site AY555_RS06065 a7670b75aabed0d70315d7afce2e7363 700 Gene3D G3DSA:1.10.287.610 3 74 7.4E-22 T 14-09-2016 AY555_RS06065 a7670b75aabed0d70315d7afce2e7363 700 Gene3D G3DSA:3.30.470.30 129 261 2.2E-48 T 14-09-2016 AY555_RS06065 a7670b75aabed0d70315d7afce2e7363 700 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 416 442 3.2E-8 T 14-09-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 AY555_RS06065 a7670b75aabed0d70315d7afce2e7363 700 Gene3D G3DSA:2.40.50.140 328 400 3.3E-34 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS06065 a7670b75aabed0d70315d7afce2e7363 700 PANTHER PTHR23389 9 548 8.9E-181 T 14-09-2016 AY555_RS06065 a7670b75aabed0d70315d7afce2e7363 700 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 125 154 - T 14-09-2016 IPR018239 NAD-dependent DNA ligase, active site AY555_RS10720 ad5eac15e4a1ad5604cfffcc94fe8603 212 Pfam PF04002 RadC-like JAB domain 145 212 1.5E-18 T 14-09-2016 IPR025657 RadC-like JAB domain AY555_RS10720 ad5eac15e4a1ad5604cfffcc94fe8603 212 Gene3D G3DSA:3.40.140.10 141 212 1.9E-21 T 14-09-2016 AY555_RS10720 ad5eac15e4a1ad5604cfffcc94fe8603 212 PANTHER PTHR30471:SF3 37 212 8.5E-39 T 14-09-2016 AY555_RS10720 ad5eac15e4a1ad5604cfffcc94fe8603 212 PANTHER PTHR30471 37 212 8.5E-39 T 14-09-2016 AY555_RS04640 12159e80ad7694c1f9b7f31ccbeb0693 232 SMART SM00862 153 229 4.5E-20 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AY555_RS04640 12159e80ad7694c1f9b7f31ccbeb0693 232 SUPERFAMILY SSF52172 4 179 3.56E-40 T 14-09-2016 IPR011006 CheY-like superfamily AY555_RS04640 12159e80ad7694c1f9b7f31ccbeb0693 232 SMART SM00448 3 113 4.2E-41 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS04640 12159e80ad7694c1f9b7f31ccbeb0693 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 228 6.5E-21 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AY555_RS04640 12159e80ad7694c1f9b7f31ccbeb0693 232 PANTHER PTHR26402:SF476 3 231 1.6E-96 T 14-09-2016 AY555_RS04640 12159e80ad7694c1f9b7f31ccbeb0693 232 Gene3D G3DSA:3.40.50.2300 4 122 1.5E-39 T 14-09-2016 AY555_RS04640 12159e80ad7694c1f9b7f31ccbeb0693 232 PANTHER PTHR26402 3 231 1.6E-96 T 14-09-2016 AY555_RS04640 12159e80ad7694c1f9b7f31ccbeb0693 232 Pfam PF00072 Response regulator receiver domain 5 114 1.2E-28 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS04640 12159e80ad7694c1f9b7f31ccbeb0693 232 Gene3D G3DSA:1.10.10.10 132 230 3.0E-26 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS02570 64d4d3dc4c41cc65a04a2bd43641cc45 378 Pfam PF13477 Glycosyl transferase 4-like 4 153 2.3E-21 T 14-09-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AY555_RS02570 64d4d3dc4c41cc65a04a2bd43641cc45 378 PANTHER PTHR12526:SF373 52 372 3.6E-48 T 14-09-2016 AY555_RS02570 64d4d3dc4c41cc65a04a2bd43641cc45 378 Pfam PF00534 Glycosyl transferases group 1 189 348 1.4E-31 T 14-09-2016 IPR001296 Glycosyl transferase, family 1 AY555_RS02570 64d4d3dc4c41cc65a04a2bd43641cc45 378 Gene3D G3DSA:3.40.50.2000 189 348 7.6E-23 T 14-09-2016 AY555_RS02570 64d4d3dc4c41cc65a04a2bd43641cc45 378 PANTHER PTHR12526 52 372 3.6E-48 T 14-09-2016 AY555_RS02570 64d4d3dc4c41cc65a04a2bd43641cc45 378 SUPERFAMILY SSF53756 17 371 1.36E-62 T 14-09-2016 AY555_RS08975 d2c073cb865c197205117faf9c52ce79 570 PANTHER PTHR30183 430 566 7.7E-225 T 14-09-2016 AY555_RS08975 d2c073cb865c197205117faf9c52ce79 570 PANTHER PTHR30183 11 413 7.7E-225 T 14-09-2016 AY555_RS08975 d2c073cb865c197205117faf9c52ce79 570 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 277 6.0E-12 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS08975 d2c073cb865c197205117faf9c52ce79 570 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 364 557 1.3E-7 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS08975 d2c073cb865c197205117faf9c52ce79 570 SUPERFAMILY SSF161098 304 560 1.12E-38 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS08975 d2c073cb865c197205117faf9c52ce79 570 PANTHER PTHR30183:SF2 430 566 7.7E-225 T 14-09-2016 AY555_RS08975 d2c073cb865c197205117faf9c52ce79 570 PANTHER PTHR30183:SF2 11 413 7.7E-225 T 14-09-2016 AY555_RS08975 d2c073cb865c197205117faf9c52ce79 570 Gene3D G3DSA:1.10.3720.10 308 565 6.7E-31 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS08975 d2c073cb865c197205117faf9c52ce79 570 Gene3D G3DSA:1.10.3720.10 34 286 8.4E-35 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS08975 d2c073cb865c197205117faf9c52ce79 570 SUPERFAMILY SSF161098 28 280 1.31E-44 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS07270 a410fa02e72748c0072ebaedc309f8b2 507 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 394 498 3.0E-10 T 14-09-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AY555_RS07270 a410fa02e72748c0072ebaedc309f8b2 507 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 37 49 2.2E-28 T 14-09-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AY555_RS07270 a410fa02e72748c0072ebaedc309f8b2 507 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 82 94 2.2E-28 T 14-09-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AY555_RS07270 a410fa02e72748c0072ebaedc309f8b2 507 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 8 20 2.2E-28 T 14-09-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AY555_RS07270 a410fa02e72748c0072ebaedc309f8b2 507 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 21 31 2.2E-28 T 14-09-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AY555_RS07270 a410fa02e72748c0072ebaedc309f8b2 507 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 359 371 2.2E-28 T 14-09-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AY555_RS07270 a410fa02e72748c0072ebaedc309f8b2 507 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 325 331 2.2E-28 T 14-09-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AY555_RS07270 a410fa02e72748c0072ebaedc309f8b2 507 Pfam PF01266 FAD dependent oxidoreductase 9 336 9.7E-42 T 14-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AY555_RS07270 a410fa02e72748c0072ebaedc309f8b2 507 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 364 374 - T 14-09-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AY555_RS07270 a410fa02e72748c0072ebaedc309f8b2 507 SUPERFAMILY SSF54373 238 331 8.63E-5 T 14-09-2016 AY555_RS07270 a410fa02e72748c0072ebaedc309f8b2 507 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 13 30 - T 14-09-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AY555_RS07270 a410fa02e72748c0072ebaedc309f8b2 507 SUPERFAMILY SSF51905 324 386 5.18E-30 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS07270 a410fa02e72748c0072ebaedc309f8b2 507 SUPERFAMILY SSF51905 7 272 5.18E-30 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS07270 a410fa02e72748c0072ebaedc309f8b2 507 PANTHER PTHR11985:SF1 7 503 1.9E-160 T 14-09-2016 AY555_RS07270 a410fa02e72748c0072ebaedc309f8b2 507 Gene3D G3DSA:3.50.50.60 8 249 3.6E-32 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS07270 a410fa02e72748c0072ebaedc309f8b2 507 PANTHER PTHR11985 7 503 1.9E-160 T 14-09-2016 AY555_RS08865 845610319012730f6e191ac179eccd60 425 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 421 5.3E-209 T 14-09-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS08865 845610319012730f6e191ac179eccd60 425 Pfam PF03952 Enolase, N-terminal domain 4 134 4.5E-60 T 14-09-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 AY555_RS08865 845610319012730f6e191ac179eccd60 425 Gene3D G3DSA:3.20.20.120 128 423 4.3E-128 T 14-09-2016 IPR029065 Enolase C-terminal domain-like AY555_RS08865 845610319012730f6e191ac179eccd60 425 ProSitePatterns PS00164 Enolase signature. 334 347 - T 14-09-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS08865 845610319012730f6e191ac179eccd60 425 SMART SM01193 4 134 3.6E-95 T 14-09-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 AY555_RS08865 845610319012730f6e191ac179eccd60 425 PRINTS PR00148 Enolase signature 37 51 1.5E-46 T 14-09-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS08865 845610319012730f6e191ac179eccd60 425 PRINTS PR00148 Enolase signature 107 123 1.5E-46 T 14-09-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS08865 845610319012730f6e191ac179eccd60 425 PRINTS PR00148 Enolase signature 161 174 1.5E-46 T 14-09-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS08865 845610319012730f6e191ac179eccd60 425 PRINTS PR00148 Enolase signature 363 380 1.5E-46 T 14-09-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS08865 845610319012730f6e191ac179eccd60 425 PRINTS PR00148 Enolase signature 334 348 1.5E-46 T 14-09-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS08865 845610319012730f6e191ac179eccd60 425 PRINTS PR00148 Enolase signature 311 322 1.5E-46 T 14-09-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS08865 845610319012730f6e191ac179eccd60 425 Hamap MF_00318 Enolase [eno]. 2 411 44.202 T 14-09-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS08865 845610319012730f6e191ac179eccd60 425 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 422 1.4E-128 T 14-09-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 AY555_RS08865 845610319012730f6e191ac179eccd60 425 Gene3D G3DSA:3.30.390.10 4 125 1.5E-56 T 14-09-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AY555_RS08865 845610319012730f6e191ac179eccd60 425 PANTHER PTHR11902 1 421 2.4E-248 T 14-09-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS08865 845610319012730f6e191ac179eccd60 425 SUPERFAMILY SSF51604 140 422 2.12E-125 T 14-09-2016 IPR029065 Enolase C-terminal domain-like AY555_RS08865 845610319012730f6e191ac179eccd60 425 SUPERFAMILY SSF54826 3 138 3.74E-57 T 14-09-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AY555_RS08865 845610319012730f6e191ac179eccd60 425 PIRSF PIRSF001400 1 424 3.4E-187 T 14-09-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AY555_RS08865 845610319012730f6e191ac179eccd60 425 SMART SM01192 139 425 5.2E-215 T 14-09-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 AY555_RS01415 f0f8abcb35fcd1e9b1336b8331c10fdd 626 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 180 6.5E-13 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS01415 f0f8abcb35fcd1e9b1336b8331c10fdd 626 SUPERFAMILY SSF110942 504 622 1.01E-27 T 14-09-2016 AY555_RS01415 f0f8abcb35fcd1e9b1336b8331c10fdd 626 PANTHER PTHR11528:SF44 4 626 6.4E-292 T 14-09-2016 AY555_RS01415 f0f8abcb35fcd1e9b1336b8331c10fdd 626 PANTHER PTHR11528 4 626 6.4E-292 T 14-09-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 AY555_RS01415 f0f8abcb35fcd1e9b1336b8331c10fdd 626 PRINTS PR00775 90kDa heat shock protein signature 74 91 4.9E-62 T 14-09-2016 IPR020575 Heat shock protein Hsp90, N-terminal AY555_RS01415 f0f8abcb35fcd1e9b1336b8331c10fdd 626 PRINTS PR00775 90kDa heat shock protein signature 92 109 4.9E-62 T 14-09-2016 IPR020575 Heat shock protein Hsp90, N-terminal AY555_RS01415 f0f8abcb35fcd1e9b1336b8331c10fdd 626 PRINTS PR00775 90kDa heat shock protein signature 169 186 4.9E-62 T 14-09-2016 IPR020575 Heat shock protein Hsp90, N-terminal AY555_RS01415 f0f8abcb35fcd1e9b1336b8331c10fdd 626 PRINTS PR00775 90kDa heat shock protein signature 4 24 4.9E-62 T 14-09-2016 IPR020575 Heat shock protein Hsp90, N-terminal AY555_RS01415 f0f8abcb35fcd1e9b1336b8331c10fdd 626 PRINTS PR00775 90kDa heat shock protein signature 187 205 4.9E-62 T 14-09-2016 IPR020575 Heat shock protein Hsp90, N-terminal AY555_RS01415 f0f8abcb35fcd1e9b1336b8331c10fdd 626 PRINTS PR00775 90kDa heat shock protein signature 25 47 4.9E-62 T 14-09-2016 IPR020575 Heat shock protein Hsp90, N-terminal AY555_RS01415 f0f8abcb35fcd1e9b1336b8331c10fdd 626 PRINTS PR00775 90kDa heat shock protein signature 119 141 4.9E-62 T 14-09-2016 IPR020575 Heat shock protein Hsp90, N-terminal AY555_RS01415 f0f8abcb35fcd1e9b1336b8331c10fdd 626 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 24 33 - T 14-09-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 AY555_RS01415 f0f8abcb35fcd1e9b1336b8331c10fdd 626 PIRSF PIRSF002583 2 626 7.7E-208 T 14-09-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 AY555_RS01415 f0f8abcb35fcd1e9b1336b8331c10fdd 626 Hamap MF_00505 Chaperone protein HtpG [htpG]. 1 622 29.724 T 14-09-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 AY555_RS01415 f0f8abcb35fcd1e9b1336b8331c10fdd 626 Gene3D G3DSA:3.30.565.10 4 230 5.2E-82 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS01415 f0f8abcb35fcd1e9b1336b8331c10fdd 626 SUPERFAMILY SSF54211 223 474 4.55E-88 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AY555_RS01415 f0f8abcb35fcd1e9b1336b8331c10fdd 626 Pfam PF00183 Hsp90 protein 215 625 9.3E-114 T 14-09-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 AY555_RS01415 f0f8abcb35fcd1e9b1336b8331c10fdd 626 SUPERFAMILY SSF55874 3 209 2.49E-66 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS01415 f0f8abcb35fcd1e9b1336b8331c10fdd 626 SMART SM00387 26 181 9.0E-10 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS09670 a998c34303d5729a9756f7d45dbeed02 267 PANTHER PTHR30294 8 262 8.4E-59 T 14-09-2016 AY555_RS09670 a998c34303d5729a9756f7d45dbeed02 267 PANTHER PTHR30294:SF13 8 262 8.4E-59 T 14-09-2016 AY555_RS09670 a998c34303d5729a9756f7d45dbeed02 267 Pfam PF01061 ABC-2 type transporter 10 218 5.7E-28 T 14-09-2016 IPR013525 ABC-2 type transporter GO:0016020 AY555_RS09670 a998c34303d5729a9756f7d45dbeed02 267 PIRSF PIRSF006648 2 257 2.5E-45 T 14-09-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AY555_RS09670 a998c34303d5729a9756f7d45dbeed02 267 PRINTS PR00164 ABC-2 type transport system membrane protein signature 139 163 1.6E-10 T 14-09-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AY555_RS09670 a998c34303d5729a9756f7d45dbeed02 267 PRINTS PR00164 ABC-2 type transport system membrane protein signature 26 47 1.6E-10 T 14-09-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AY555_RS09670 a998c34303d5729a9756f7d45dbeed02 267 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 1.6E-10 T 14-09-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AY555_RS09670 a998c34303d5729a9756f7d45dbeed02 267 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 1.6E-10 T 14-09-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AY555_RS00450 c8b4288a797839df259b182d219adbca 324 SUPERFAMILY SSF55821 9 206 7.94E-65 T 14-09-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain AY555_RS00450 c8b4288a797839df259b182d219adbca 324 Gene3D G3DSA:3.90.870.10 8 201 1.1E-75 T 14-09-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain AY555_RS00450 c8b4288a797839df259b182d219adbca 324 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 10 205 4.1E-56 T 14-09-2016 IPR006070 YrdC-like domain GO:0003725 AY555_RS00450 c8b4288a797839df259b182d219adbca 324 PANTHER PTHR17490 8 318 1.2E-104 T 14-09-2016 AY555_RS00450 c8b4288a797839df259b182d219adbca 324 PIRSF PIRSF004930 4 318 2.1E-105 T 14-09-2016 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 AY555_RS00450 c8b4288a797839df259b182d219adbca 324 Pfam PF01300 Telomere recombination 18 194 5.6E-58 T 14-09-2016 IPR006070 YrdC-like domain GO:0003725 AY555_RS00450 c8b4288a797839df259b182d219adbca 324 Pfam PF03481 Putative GTP-binding controlling metal-binding 196 314 2.5E-19 T 14-09-2016 IPR005145 Putative GTP-binding controlling metal-binding domain AY555_RS00450 c8b4288a797839df259b182d219adbca 324 PANTHER PTHR17490:SF3 8 318 1.2E-104 T 14-09-2016 AY555_RS03810 75ae55874619fb3e63e9a5442d3d3d30 230 PANTHER PTHR30231:SF0 1 169 1.7E-74 T 14-09-2016 AY555_RS03810 75ae55874619fb3e63e9a5442d3d3d30 230 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 224 5.6E-82 T 14-09-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AY555_RS03810 75ae55874619fb3e63e9a5442d3d3d30 230 SMART SM00479 2 172 9.5E-43 T 14-09-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III AY555_RS03810 75ae55874619fb3e63e9a5442d3d3d30 230 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 3 167 1.3E-43 T 14-09-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AY555_RS03810 75ae55874619fb3e63e9a5442d3d3d30 230 Pfam PF00929 Exonuclease 4 163 1.4E-32 T 14-09-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III AY555_RS03810 75ae55874619fb3e63e9a5442d3d3d30 230 SUPERFAMILY SSF53098 1 169 1.41E-51 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AY555_RS03810 75ae55874619fb3e63e9a5442d3d3d30 230 PANTHER PTHR30231 1 169 1.7E-74 T 14-09-2016 AY555_RS03810 75ae55874619fb3e63e9a5442d3d3d30 230 Gene3D G3DSA:3.30.420.10 1 172 1.1E-60 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AY555_RS02410 bd2210d360ba5d7d31128391e04bdcc9 566 Gene3D G3DSA:1.10.3210.10 425 522 9.3E-4 T 14-09-2016 IPR006674 HD domain AY555_RS02410 bd2210d360ba5d7d31128391e04bdcc9 566 Pfam PF13487 HD domain 424 489 3.1E-22 T 14-09-2016 AY555_RS02410 bd2210d360ba5d7d31128391e04bdcc9 566 Gene3D G3DSA:1.10.3210.10 206 287 7.1E-9 T 14-09-2016 IPR006674 HD domain AY555_RS02410 bd2210d360ba5d7d31128391e04bdcc9 566 PANTHER PTHR11347 3 196 1.4E-14 T 14-09-2016 AY555_RS02410 bd2210d360ba5d7d31128391e04bdcc9 566 SUPERFAMILY SSF109604 208 294 2.29E-8 T 14-09-2016 AY555_RS02410 bd2210d360ba5d7d31128391e04bdcc9 566 SUPERFAMILY SSF55781 6 199 2.4E-24 T 14-09-2016 IPR029016 GAF domain-like AY555_RS02410 bd2210d360ba5d7d31128391e04bdcc9 566 SUPERFAMILY SSF109604 424 537 5.97E-9 T 14-09-2016 AY555_RS02410 bd2210d360ba5d7d31128391e04bdcc9 566 PANTHER PTHR11347:SF82 3 196 1.4E-14 T 14-09-2016 AY555_RS02410 bd2210d360ba5d7d31128391e04bdcc9 566 Pfam PF01590 GAF domain 25 189 6.2E-13 T 14-09-2016 IPR003018 GAF domain GO:0005515 AY555_RS02410 bd2210d360ba5d7d31128391e04bdcc9 566 Gene3D G3DSA:3.30.450.40 10 200 2.4E-31 T 14-09-2016 IPR029016 GAF domain-like AY555_RS02410 bd2210d360ba5d7d31128391e04bdcc9 566 SMART SM00065 23 199 8.8E-15 T 14-09-2016 IPR003018 GAF domain GO:0005515 AY555_RS06310 5dee05b04971d1224a18014f492444c6 642 SMART SM01358 44 266 0.0014 T 14-09-2016 IPR032255 Helical bimodular sensor domain AY555_RS06310 5dee05b04971d1224a18014f492444c6 642 SMART SM00304 291 344 1.2E-8 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AY555_RS06310 5dee05b04971d1224a18014f492444c6 642 Pfam PF00672 HAMP domain 273 339 1.1E-7 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AY555_RS06310 5dee05b04971d1224a18014f492444c6 642 SUPERFAMILY SSF158472 292 340 9.15E-9 T 14-09-2016 AY555_RS06310 5dee05b04971d1224a18014f492444c6 642 SUPERFAMILY SSF58104 355 634 9.02E-55 T 14-09-2016 AY555_RS06310 5dee05b04971d1224a18014f492444c6 642 PANTHER PTHR32089 261 326 2.9E-92 T 14-09-2016 AY555_RS06310 5dee05b04971d1224a18014f492444c6 642 SMART SM00283 388 635 1.9E-40 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AY555_RS06310 5dee05b04971d1224a18014f492444c6 642 PANTHER PTHR32089:SF56 261 326 2.9E-92 T 14-09-2016 AY555_RS06310 5dee05b04971d1224a18014f492444c6 642 PANTHER PTHR32089:SF56 359 638 2.9E-92 T 14-09-2016 AY555_RS06310 5dee05b04971d1224a18014f492444c6 642 Gene3D G3DSA:1.10.287.950 397 605 7.0E-41 T 14-09-2016 AY555_RS06310 5dee05b04971d1224a18014f492444c6 642 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 455 634 4.9E-31 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AY555_RS06310 5dee05b04971d1224a18014f492444c6 642 PANTHER PTHR32089 359 638 2.9E-92 T 14-09-2016 AY555_RS08155 b2c61e9d1501540f28d8732cbf73bad2 433 Pfam PF00464 Serine hydroxymethyltransferase 15 391 8.6E-174 T 14-09-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 AY555_RS08155 b2c61e9d1501540f28d8732cbf73bad2 433 PIRSF PIRSF000412 2 431 2.7E-168 T 14-09-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 AY555_RS08155 b2c61e9d1501540f28d8732cbf73bad2 433 Gene3D G3DSA:3.40.640.10 43 289 7.0E-103 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AY555_RS08155 b2c61e9d1501540f28d8732cbf73bad2 433 SUPERFAMILY SSF53383 7 428 1.83E-178 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AY555_RS08155 b2c61e9d1501540f28d8732cbf73bad2 433 PANTHER PTHR11680 7 433 6.2E-248 T 14-09-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 AY555_RS08155 b2c61e9d1501540f28d8732cbf73bad2 433 Gene3D G3DSA:3.90.1150.10 290 428 1.9E-54 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AY555_RS08155 b2c61e9d1501540f28d8732cbf73bad2 433 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 13 427 52.846 T 14-09-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 AY555_RS08155 b2c61e9d1501540f28d8732cbf73bad2 433 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 228 244 - T 14-09-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 AY555_RS07165 8e96b8b12b3d4ef3e55c58cb4122f098 584 Gene3D G3DSA:3.30.300.30 473 571 1.8E-25 T 14-09-2016 AY555_RS07165 8e96b8b12b3d4ef3e55c58cb4122f098 584 Gene3D G3DSA:3.40.50.980 42 156 2.1E-34 T 14-09-2016 AY555_RS07165 8e96b8b12b3d4ef3e55c58cb4122f098 584 Gene3D G3DSA:3.40.50.980 214 238 2.1E-34 T 14-09-2016 AY555_RS07165 8e96b8b12b3d4ef3e55c58cb4122f098 584 Gene3D G3DSA:2.30.38.10 396 469 1.3E-24 T 14-09-2016 AY555_RS07165 8e96b8b12b3d4ef3e55c58cb4122f098 584 Pfam PF00501 AMP-binding enzyme 48 476 6.5E-103 T 14-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AY555_RS07165 8e96b8b12b3d4ef3e55c58cb4122f098 584 ProSitePatterns PS00455 Putative AMP-binding domain signature. 229 240 - T 14-09-2016 IPR020845 AMP-binding, conserved site AY555_RS07165 8e96b8b12b3d4ef3e55c58cb4122f098 584 PANTHER PTHR24096 30 181 1.1E-161 T 14-09-2016 AY555_RS07165 8e96b8b12b3d4ef3e55c58cb4122f098 584 PANTHER PTHR24096 197 572 1.1E-161 T 14-09-2016 AY555_RS07165 8e96b8b12b3d4ef3e55c58cb4122f098 584 SUPERFAMILY SSF56801 13 574 7.98E-147 T 14-09-2016 AY555_RS07165 8e96b8b12b3d4ef3e55c58cb4122f098 584 Gene3D G3DSA:3.40.50.980 239 395 6.5E-44 T 14-09-2016 AY555_RS07165 8e96b8b12b3d4ef3e55c58cb4122f098 584 Pfam PF13193 AMP-binding enzyme C-terminal domain 488 563 7.8E-18 T 14-09-2016 IPR025110 AMP-binding enzyme C-terminal domain AY555_RS05330 41ca33bab9a9dca5442b5c05a2b64bb4 264 SUPERFAMILY SSF56281 11 264 2.36E-68 T 14-09-2016 IPR001279 Metallo-beta-lactamase AY555_RS05330 41ca33bab9a9dca5442b5c05a2b64bb4 264 PANTHER PTHR11935:SF7 11 264 7.5E-89 T 14-09-2016 AY555_RS05330 41ca33bab9a9dca5442b5c05a2b64bb4 264 SMART SM00849 21 179 5.2E-34 T 14-09-2016 IPR001279 Metallo-beta-lactamase AY555_RS05330 41ca33bab9a9dca5442b5c05a2b64bb4 264 Gene3D G3DSA:3.60.15.10 14 264 3.1E-84 T 14-09-2016 IPR001279 Metallo-beta-lactamase AY555_RS05330 41ca33bab9a9dca5442b5c05a2b64bb4 264 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 13 264 2.0E-98 T 14-09-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 AY555_RS05330 41ca33bab9a9dca5442b5c05a2b64bb4 264 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 180 264 3.0E-22 T 14-09-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 AY555_RS05330 41ca33bab9a9dca5442b5c05a2b64bb4 264 PIRSF PIRSF005457 6 264 4.9E-102 T 14-09-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 AY555_RS05330 41ca33bab9a9dca5442b5c05a2b64bb4 264 Pfam PF00753 Metallo-beta-lactamase superfamily 55 179 1.3E-17 T 14-09-2016 IPR001279 Metallo-beta-lactamase AY555_RS05330 41ca33bab9a9dca5442b5c05a2b64bb4 264 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 11 264 44.088 T 14-09-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 AY555_RS05330 41ca33bab9a9dca5442b5c05a2b64bb4 264 PANTHER PTHR11935 11 264 7.5E-89 T 14-09-2016 AY555_RS01990 1d49f5711ed9fa4c7492116f9d3541a1 420 PIRSF PIRSF000151 2 420 3.4E-170 T 14-09-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AY555_RS01990 1d49f5711ed9fa4c7492116f9d3541a1 420 PANTHER PTHR11063 4 420 6.8E-168 T 14-09-2016 AY555_RS01990 1d49f5711ed9fa4c7492116f9d3541a1 420 Gene3D G3DSA:3.40.309.10 229 376 3.2E-36 T 14-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AY555_RS01990 1d49f5711ed9fa4c7492116f9d3541a1 420 Pfam PF00171 Aldehyde dehydrogenase family 8 286 3.0E-14 T 14-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AY555_RS01990 1d49f5711ed9fa4c7492116f9d3541a1 420 Gene3D G3DSA:3.40.605.10 377 419 2.3E-96 T 14-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AY555_RS01990 1d49f5711ed9fa4c7492116f9d3541a1 420 Gene3D G3DSA:3.40.605.10 8 227 2.3E-96 T 14-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AY555_RS01990 1d49f5711ed9fa4c7492116f9d3541a1 420 PANTHER PTHR11063:SF8 4 420 6.8E-168 T 14-09-2016 AY555_RS01990 1d49f5711ed9fa4c7492116f9d3541a1 420 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 8 419 40.047 T 14-09-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AY555_RS01990 1d49f5711ed9fa4c7492116f9d3541a1 420 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 326 348 - T 14-09-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AY555_RS01990 1d49f5711ed9fa4c7492116f9d3541a1 420 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 16 409 4.5E-137 T 14-09-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AY555_RS01990 1d49f5711ed9fa4c7492116f9d3541a1 420 SUPERFAMILY SSF53720 9 419 6.02E-112 T 14-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AY555_RS04840 ee929747c37755df001eb386ca5dba44 133 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 87 2.0E-25 T 14-09-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 AY555_RS04840 ee929747c37755df001eb386ca5dba44 133 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 84 5.5E-24 T 14-09-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 AY555_RS04840 ee929747c37755df001eb386ca5dba44 133 Gene3D G3DSA:2.60.15.10 1 90 1.1E-28 T 14-09-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 AY555_RS04840 ee929747c37755df001eb386ca5dba44 133 PANTHER PTHR13822 1 132 1.9E-31 T 14-09-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AY555_RS04840 ee929747c37755df001eb386ca5dba44 133 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 131 3.8E-26 T 14-09-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AY555_RS04840 ee929747c37755df001eb386ca5dba44 133 PANTHER PTHR13822:SF7 1 132 1.9E-31 T 14-09-2016 AY555_RS04840 ee929747c37755df001eb386ca5dba44 133 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 131 18.772 T 14-09-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AY555_RS04840 ee929747c37755df001eb386ca5dba44 133 SUPERFAMILY SSF51344 4 85 2.35E-22 T 14-09-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 AY555_RS08535 11a4dd1d02bd9ff9142c764a76977fe0 330 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 30 298 4.6E-50 T 14-09-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AY555_RS08535 11a4dd1d02bd9ff9142c764a76977fe0 330 PANTHER PTHR30480:SF7 10 287 3.2E-84 T 14-09-2016 AY555_RS08535 11a4dd1d02bd9ff9142c764a76977fe0 330 PANTHER PTHR30480 10 287 3.2E-84 T 14-09-2016 AY555_RS08535 11a4dd1d02bd9ff9142c764a76977fe0 330 SUPERFAMILY SSF51445 9 296 5.37E-64 T 14-09-2016 IPR017853 Glycoside hydrolase superfamily AY555_RS08535 11a4dd1d02bd9ff9142c764a76977fe0 330 Gene3D G3DSA:3.20.20.300 11 293 2.6E-64 T 14-09-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AY555_RS06255 9c3b39df2c6d981fdf82ef03bdbbc24e 110 SUPERFAMILY SSF54292 1 101 1.7E-33 T 14-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AY555_RS06255 9c3b39df2c6d981fdf82ef03bdbbc24e 110 PANTHER PTHR23426 3 105 6.9E-50 T 14-09-2016 AY555_RS06255 9c3b39df2c6d981fdf82ef03bdbbc24e 110 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 90 3.9E-14 T 14-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AY555_RS06255 9c3b39df2c6d981fdf82ef03bdbbc24e 110 Gene3D G3DSA:3.10.20.30 1 101 4.4E-43 T 14-09-2016 IPR012675 Beta-grasp domain AY555_RS06255 9c3b39df2c6d981fdf82ef03bdbbc24e 110 PRINTS PR00355 Adrenodoxin signature 81 89 2.6E-11 T 14-09-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 AY555_RS06255 9c3b39df2c6d981fdf82ef03bdbbc24e 110 PRINTS PR00355 Adrenodoxin signature 39 49 2.6E-11 T 14-09-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 AY555_RS06255 9c3b39df2c6d981fdf82ef03bdbbc24e 110 PRINTS PR00355 Adrenodoxin signature 58 72 2.6E-11 T 14-09-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 AY555_RS06255 9c3b39df2c6d981fdf82ef03bdbbc24e 110 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 39 49 - T 14-09-2016 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 AY555_RS01620 10a0ebb5e8406470dda360c7242aa29c 194 SUPERFAMILY SSF52540 21 182 1.51E-24 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS01620 10a0ebb5e8406470dda360c7242aa29c 194 Gene3D G3DSA:3.40.50.300 19 183 1.6E-45 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS01620 10a0ebb5e8406470dda360c7242aa29c 194 PANTHER PTHR21087:SF0 19 182 8.8E-49 T 14-09-2016 AY555_RS01620 10a0ebb5e8406470dda360c7242aa29c 194 PANTHER PTHR21087 19 182 8.8E-49 T 14-09-2016 AY555_RS01620 10a0ebb5e8406470dda360c7242aa29c 194 Pfam PF01202 Shikimate kinase 27 181 7.5E-42 T 14-09-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 AY555_RS01620 10a0ebb5e8406470dda360c7242aa29c 194 PRINTS PR01100 Shikimate kinase family signature 112 129 2.0E-18 T 14-09-2016 AY555_RS01620 10a0ebb5e8406470dda360c7242aa29c 194 PRINTS PR01100 Shikimate kinase family signature 91 100 2.0E-18 T 14-09-2016 AY555_RS01620 10a0ebb5e8406470dda360c7242aa29c 194 PRINTS PR01100 Shikimate kinase family signature 21 36 2.0E-18 T 14-09-2016 AY555_RS01620 10a0ebb5e8406470dda360c7242aa29c 194 PRINTS PR01100 Shikimate kinase family signature 73 81 2.0E-18 T 14-09-2016 AY555_RS01620 10a0ebb5e8406470dda360c7242aa29c 194 PRINTS PR01100 Shikimate kinase family signature 45 58 2.0E-18 T 14-09-2016 AY555_RS01620 10a0ebb5e8406470dda360c7242aa29c 194 Hamap MF_00109 Shikimate kinase [aroK]. 18 183 26.287 T 14-09-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 AY555_RS01620 10a0ebb5e8406470dda360c7242aa29c 194 ProSitePatterns PS01128 Shikimate kinase signature. 74 99 - T 14-09-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 AY555_RS00195 24d3320ccbfc85e6d97a13e907e87412 734 PANTHER PTHR30033 462 534 2.7E-66 T 14-09-2016 AY555_RS00195 24d3320ccbfc85e6d97a13e907e87412 734 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 7 362 2.3E-56 T 14-09-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AY555_RS00195 24d3320ccbfc85e6d97a13e907e87412 734 PANTHER PTHR30033:SF1 462 534 2.7E-66 T 14-09-2016 AY555_RS00195 24d3320ccbfc85e6d97a13e907e87412 734 Pfam PF00460 Flagella basal body rod protein 7 36 6.1E-8 T 14-09-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AY555_RS00195 24d3320ccbfc85e6d97a13e907e87412 734 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 692 731 1.0E-8 T 14-09-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AY555_RS00195 24d3320ccbfc85e6d97a13e907e87412 734 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 14-09-2016 IPR019776 Flagellar basal body rod protein, conserved site AY555_RS00195 24d3320ccbfc85e6d97a13e907e87412 734 PANTHER PTHR30033:SF1 1 419 2.7E-66 T 14-09-2016 AY555_RS00195 24d3320ccbfc85e6d97a13e907e87412 734 PANTHER PTHR30033:SF1 594 734 2.7E-66 T 14-09-2016 AY555_RS00195 24d3320ccbfc85e6d97a13e907e87412 734 SUPERFAMILY SSF64518 334 381 9.42E-6 T 14-09-2016 AY555_RS00195 24d3320ccbfc85e6d97a13e907e87412 734 SUPERFAMILY SSF64518 467 523 9.42E-6 T 14-09-2016 AY555_RS00195 24d3320ccbfc85e6d97a13e907e87412 734 SUPERFAMILY SSF64518 99 288 9.42E-6 T 14-09-2016 AY555_RS00195 24d3320ccbfc85e6d97a13e907e87412 734 SUPERFAMILY SSF64518 619 729 9.42E-6 T 14-09-2016 AY555_RS00195 24d3320ccbfc85e6d97a13e907e87412 734 PANTHER PTHR30033 1 419 2.7E-66 T 14-09-2016 AY555_RS00195 24d3320ccbfc85e6d97a13e907e87412 734 PANTHER PTHR30033 594 734 2.7E-66 T 14-09-2016 AY555_RS05050 389109bebbf83fa979751b0f3eca1cb6 181 Gene3D G3DSA:3.90.960.10 7 162 5.5E-54 T 14-09-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AY555_RS05050 389109bebbf83fa979751b0f3eca1cb6 181 Pfam PF04073 Aminoacyl-tRNA editing domain 26 152 6.2E-25 T 14-09-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AY555_RS05050 389109bebbf83fa979751b0f3eca1cb6 181 PANTHER PTHR31423 1 158 2.7E-48 T 14-09-2016 AY555_RS05050 389109bebbf83fa979751b0f3eca1cb6 181 SUPERFAMILY SSF55826 7 160 2.49E-40 T 14-09-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AY555_RS08000 771a206a370605278017b989a3c0d5c4 254 Pfam PF00717 Peptidase S24-like 36 122 1.1E-20 T 14-09-2016 IPR019759 Peptidase S24/S26A/S26B AY555_RS08000 771a206a370605278017b989a3c0d5c4 254 PANTHER PTHR12383:SF27 11 61 2.4E-68 T 14-09-2016 AY555_RS08000 771a206a370605278017b989a3c0d5c4 254 SUPERFAMILY SSF51306 27 242 9.42E-62 T 14-09-2016 IPR015927 Peptidase S24/S26A/S26B/S26C AY555_RS08000 771a206a370605278017b989a3c0d5c4 254 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 29 45 3.7E-22 T 14-09-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AY555_RS08000 771a206a370605278017b989a3c0d5c4 254 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 177 196 3.7E-22 T 14-09-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AY555_RS08000 771a206a370605278017b989a3c0d5c4 254 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 99 111 3.7E-22 T 14-09-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AY555_RS08000 771a206a370605278017b989a3c0d5c4 254 Gene3D G3DSA:2.10.109.10 25 109 7.9E-46 T 14-09-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain AY555_RS08000 771a206a370605278017b989a3c0d5c4 254 Gene3D G3DSA:2.10.109.10 177 230 7.9E-46 T 14-09-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain AY555_RS08000 771a206a370605278017b989a3c0d5c4 254 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 14 219 8.8E-49 T 14-09-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AY555_RS08000 771a206a370605278017b989a3c0d5c4 254 PANTHER PTHR12383 78 218 2.4E-68 T 14-09-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AY555_RS08000 771a206a370605278017b989a3c0d5c4 254 ProSitePatterns PS00761 Signal peptidases I signature 3. 182 195 - T 14-09-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 AY555_RS08000 771a206a370605278017b989a3c0d5c4 254 ProSitePatterns PS00760 Signal peptidases I lysine active site. 101 113 - T 14-09-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 AY555_RS08000 771a206a370605278017b989a3c0d5c4 254 PANTHER PTHR12383 11 61 2.4E-68 T 14-09-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AY555_RS08000 771a206a370605278017b989a3c0d5c4 254 PANTHER PTHR12383:SF27 78 218 2.4E-68 T 14-09-2016 AY555_RS06265 3742c706ae862b959c6e5476528ba69a 152 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 14-09-2016 IPR030489 Transcription regulator Rrf2-type, conserved site AY555_RS06265 3742c706ae862b959c6e5476528ba69a 152 PANTHER PTHR33221 2 135 7.7E-52 T 14-09-2016 AY555_RS06265 3742c706ae862b959c6e5476528ba69a 152 SUPERFAMILY SSF46785 2 135 1.34E-34 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS06265 3742c706ae862b959c6e5476528ba69a 152 PANTHER PTHR33221:SF1 2 135 7.7E-52 T 14-09-2016 AY555_RS06265 3742c706ae862b959c6e5476528ba69a 152 Pfam PF02082 Transcriptional regulator 2 83 8.2E-26 T 14-09-2016 IPR000944 Transcription regulator Rrf2-type AY555_RS06265 3742c706ae862b959c6e5476528ba69a 152 Gene3D G3DSA:1.10.10.10 2 135 7.4E-30 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS06265 3742c706ae862b959c6e5476528ba69a 152 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 133 4.3E-40 T 14-09-2016 IPR000944 Transcription regulator Rrf2-type AY555_RS05095 34044d727f874ef268e2efe3e1a0850c 201 PANTHER PTHR11237:SF4 28 201 7.1E-83 T 14-09-2016 AY555_RS05095 34044d727f874ef268e2efe3e1a0850c 201 Gene3D G3DSA:1.20.1260.10 40 166 2.3E-5 T 14-09-2016 IPR012347 Ferritin-related AY555_RS05095 34044d727f874ef268e2efe3e1a0850c 201 PANTHER PTHR11237 28 201 7.1E-83 T 14-09-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 AY555_RS05095 34044d727f874ef268e2efe3e1a0850c 201 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 37 201 3.5E-68 T 14-09-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 AY555_RS05095 34044d727f874ef268e2efe3e1a0850c 201 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 6 201 28.764 T 14-09-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 AY555_RS05095 34044d727f874ef268e2efe3e1a0850c 201 SUPERFAMILY SSF47240 40 171 4.44E-17 T 14-09-2016 IPR009078 Ferritin-like superfamily AY555_RS04260 1450da18b7760de4dc8dc89ab353472e 224 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 111 2.1E-20 T 14-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AY555_RS04260 1450da18b7760de4dc8dc89ab353472e 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 216 6.0E-22 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS04260 1450da18b7760de4dc8dc89ab353472e 224 PANTHER PTHR30133 2 224 3.7E-94 T 14-09-2016 AY555_RS04260 1450da18b7760de4dc8dc89ab353472e 224 SUPERFAMILY SSF161098 8 202 1.31E-39 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS04260 1450da18b7760de4dc8dc89ab353472e 224 Gene3D G3DSA:1.10.3720.10 8 216 5.5E-44 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS02345 3603974d8bf8cddc6c2a5cb855c1d545 351 Gene3D G3DSA:1.10.3720.10 113 336 1.9E-14 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS02345 3603974d8bf8cddc6c2a5cb855c1d545 351 SUPERFAMILY SSF161098 114 331 1.57E-15 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS02345 3603974d8bf8cddc6c2a5cb855c1d545 351 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 138 346 6.2E-35 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS02345 3603974d8bf8cddc6c2a5cb855c1d545 351 PANTHER PTHR30465:SF66 1 347 8.5E-170 T 14-09-2016 AY555_RS02345 3603974d8bf8cddc6c2a5cb855c1d545 351 PANTHER PTHR30465 1 347 8.5E-170 T 14-09-2016 AY555_RS02580 aa2c6c160dcdeef6cf7f297fc68f842a 625 Gene3D G3DSA:3.40.50.620 471 620 8.1E-84 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS02580 aa2c6c160dcdeef6cf7f297fc68f842a 625 Gene3D G3DSA:3.40.50.620 208 370 8.1E-84 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS02580 aa2c6c160dcdeef6cf7f297fc68f842a 625 SUPERFAMILY SSF52402 475 612 5.42E-81 T 14-09-2016 AY555_RS02580 aa2c6c160dcdeef6cf7f297fc68f842a 625 SUPERFAMILY SSF52402 224 373 5.42E-81 T 14-09-2016 AY555_RS02580 aa2c6c160dcdeef6cf7f297fc68f842a 625 Pfam PF00733 Asparagine synthase 233 620 3.5E-96 T 14-09-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 AY555_RS02580 aa2c6c160dcdeef6cf7f297fc68f842a 625 SUPERFAMILY SSF56235 7 209 2.32E-56 T 14-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AY555_RS02580 aa2c6c160dcdeef6cf7f297fc68f842a 625 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 5 557 2.0E-138 T 14-09-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 AY555_RS02580 aa2c6c160dcdeef6cf7f297fc68f842a 625 Pfam PF13537 Glutamine amidotransferase domain 33 152 1.3E-43 T 14-09-2016 IPR017932 Glutamine amidotransferase type 2 domain AY555_RS02580 aa2c6c160dcdeef6cf7f297fc68f842a 625 PANTHER PTHR11772:SF10 5 375 4.1E-163 T 14-09-2016 AY555_RS02580 aa2c6c160dcdeef6cf7f297fc68f842a 625 PANTHER PTHR11772:SF10 467 618 4.1E-163 T 14-09-2016 AY555_RS02580 aa2c6c160dcdeef6cf7f297fc68f842a 625 Gene3D G3DSA:3.60.20.10 6 207 2.2E-60 T 14-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AY555_RS02580 aa2c6c160dcdeef6cf7f297fc68f842a 625 PIRSF PIRSF001589 2 624 1.7E-153 T 14-09-2016 AY555_RS02580 aa2c6c160dcdeef6cf7f297fc68f842a 625 PANTHER PTHR11772 5 375 4.1E-163 T 14-09-2016 AY555_RS02580 aa2c6c160dcdeef6cf7f297fc68f842a 625 PANTHER PTHR11772 467 618 4.1E-163 T 14-09-2016 AY555_RS04480 e97861202bb450a4842c0087ab22793c 470 Pfam PF00501 AMP-binding enzyme 11 385 4.9E-51 T 14-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AY555_RS04480 e97861202bb450a4842c0087ab22793c 470 PANTHER PTHR24096 4 399 9.7E-45 T 14-09-2016 AY555_RS04480 e97861202bb450a4842c0087ab22793c 470 SUPERFAMILY SSF56801 12 468 4.84E-77 T 14-09-2016 AY555_RS04480 e97861202bb450a4842c0087ab22793c 470 Gene3D G3DSA:3.40.50.980 145 303 1.7E-26 T 14-09-2016 AY555_RS04480 e97861202bb450a4842c0087ab22793c 470 Gene3D G3DSA:3.40.50.980 11 144 3.1E-8 T 14-09-2016 AY555_RS04480 e97861202bb450a4842c0087ab22793c 470 Gene3D G3DSA:2.30.38.10 304 379 1.0E-12 T 14-09-2016 AY555_RS01525 7b104d62e63476f7b714a4be9350a6a0 290 Gene3D G3DSA:1.10.3720.10 6 268 7.8E-61 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS01525 7b104d62e63476f7b714a4be9350a6a0 290 PANTHER PTHR30222 12 269 2.0E-77 T 14-09-2016 AY555_RS01525 7b104d62e63476f7b714a4be9350a6a0 290 PANTHER PTHR30222:SF1 12 269 2.0E-77 T 14-09-2016 AY555_RS01525 7b104d62e63476f7b714a4be9350a6a0 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 77 260 3.3E-17 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS01525 7b104d62e63476f7b714a4be9350a6a0 290 SUPERFAMILY SSF161098 4 264 8.88E-54 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS03465 ac02d57eba1f6d26f63fa0606141b8fd 396 SUPERFAMILY SSF90257 27 111 1.94E-6 T 14-09-2016 AY555_RS03465 ac02d57eba1f6d26f63fa0606141b8fd 396 PANTHER PTHR21666:SF204 1 394 3.9E-34 T 14-09-2016 AY555_RS03465 ac02d57eba1f6d26f63fa0606141b8fd 396 Gene3D G3DSA:2.70.70.10 268 392 6.4E-25 T 14-09-2016 AY555_RS03465 ac02d57eba1f6d26f63fa0606141b8fd 396 PANTHER PTHR21666 1 394 3.9E-34 T 14-09-2016 AY555_RS03465 ac02d57eba1f6d26f63fa0606141b8fd 396 Pfam PF01551 Peptidase family M23 298 387 2.1E-18 T 14-09-2016 IPR016047 Peptidase M23 AY555_RS03465 ac02d57eba1f6d26f63fa0606141b8fd 396 SUPERFAMILY SSF51261 227 391 5.75E-26 T 14-09-2016 IPR011055 Duplicated hybrid motif AY555_RS08945 98fd32448759834b0f423b22ee5c9fce 471 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 467 6.0E-156 T 14-09-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AY555_RS08945 98fd32448759834b0f423b22ee5c9fce 471 Gene3D G3DSA:3.40.50.620 182 231 4.6E-52 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS08945 98fd32448759834b0f423b22ee5c9fce 471 Gene3D G3DSA:3.40.50.620 3 67 4.6E-52 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS08945 98fd32448759834b0f423b22ee5c9fce 471 PANTHER PTHR11451 2 311 4.2E-91 T 14-09-2016 AY555_RS08945 98fd32448759834b0f423b22ee5c9fce 471 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 305 3.4E-94 T 14-09-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 AY555_RS08945 98fd32448759834b0f423b22ee5c9fce 471 PANTHER PTHR11451 386 417 4.2E-91 T 14-09-2016 AY555_RS08945 98fd32448759834b0f423b22ee5c9fce 471 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 3 466 33.295 T 14-09-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AY555_RS08945 98fd32448759834b0f423b22ee5c9fce 471 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 14-09-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS08945 98fd32448759834b0f423b22ee5c9fce 471 PANTHER PTHR11451:SF41 2 311 4.2E-91 T 14-09-2016 AY555_RS08945 98fd32448759834b0f423b22ee5c9fce 471 Gene3D G3DSA:1.10.1160.10 234 315 2.7E-29 T 14-09-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 AY555_RS08945 98fd32448759834b0f423b22ee5c9fce 471 SUPERFAMILY SSF52374 3 298 1.58E-109 T 14-09-2016 AY555_RS08945 98fd32448759834b0f423b22ee5c9fce 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.7E-26 T 14-09-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AY555_RS08945 98fd32448759834b0f423b22ee5c9fce 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.7E-26 T 14-09-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AY555_RS08945 98fd32448759834b0f423b22ee5c9fce 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.7E-26 T 14-09-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AY555_RS08945 98fd32448759834b0f423b22ee5c9fce 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 180 190 1.7E-26 T 14-09-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AY555_RS08945 98fd32448759834b0f423b22ee5c9fce 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 196 204 1.7E-26 T 14-09-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AY555_RS08945 98fd32448759834b0f423b22ee5c9fce 471 SUPERFAMILY SSF48163 300 466 3.66E-38 T 14-09-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AY555_RS08945 98fd32448759834b0f423b22ee5c9fce 471 PANTHER PTHR11451:SF41 386 417 4.2E-91 T 14-09-2016 AY555_RS08945 98fd32448759834b0f423b22ee5c9fce 471 Gene3D G3DSA:1.10.10.350 372 466 2.2E-29 T 14-09-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AY555_RS08945 98fd32448759834b0f423b22ee5c9fce 471 Gene3D G3DSA:3.90.800.10 68 181 9.1E-37 T 14-09-2016 AY555_RS09010 386a60da25a59e225bed96db97eb967e 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.4E-12 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS09010 386a60da25a59e225bed96db97eb967e 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.4E-12 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS09010 386a60da25a59e225bed96db97eb967e 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.4E-12 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS09010 386a60da25a59e225bed96db97eb967e 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 14-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AY555_RS09010 386a60da25a59e225bed96db97eb967e 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 258 6.5E-57 T 14-09-2016 AY555_RS09010 386a60da25a59e225bed96db97eb967e 260 Gene3D G3DSA:3.40.50.720 1 258 6.2E-80 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS09010 386a60da25a59e225bed96db97eb967e 260 SUPERFAMILY SSF51735 3 259 8.7E-77 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS09010 386a60da25a59e225bed96db97eb967e 260 PANTHER PTHR24322:SF513 155 187 1.1E-51 T 14-09-2016 AY555_RS09010 386a60da25a59e225bed96db97eb967e 260 PANTHER PTHR24322 155 187 1.1E-51 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS09010 386a60da25a59e225bed96db97eb967e 260 PANTHER PTHR24322 9 139 1.1E-51 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS09010 386a60da25a59e225bed96db97eb967e 260 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 5 260 1.4E-99 T 14-09-2016 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 AY555_RS09010 386a60da25a59e225bed96db97eb967e 260 PANTHER PTHR24322:SF513 9 139 1.1E-51 T 14-09-2016 AY555_RS09010 386a60da25a59e225bed96db97eb967e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 3.4E-39 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS09010 386a60da25a59e225bed96db97eb967e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 3.4E-39 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS09010 386a60da25a59e225bed96db97eb967e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 3.4E-39 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS09010 386a60da25a59e225bed96db97eb967e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.4E-39 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS09010 386a60da25a59e225bed96db97eb967e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 3.4E-39 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS09010 386a60da25a59e225bed96db97eb967e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 3.4E-39 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS09025 28aaf10ccce8445564a96e0744aea545 222 Pfam PF06242 Protein of unknown function (DUF1013) 34 169 5.7E-65 T 14-09-2016 IPR010421 Protein of unknown function DUF1013 AY555_RS09165 68b9656246be155c49dc2eaf89aa148b 770 Hamap MF_01895 Ribonuclease R [rnr]. 30 712 51.736 T 14-09-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AY555_RS09165 68b9656246be155c49dc2eaf89aa148b 770 ProSitePatterns PS01175 Ribonuclease II family signature. 548 572 - T 14-09-2016 IPR022966 Ribonuclease II/R, conserved site AY555_RS09165 68b9656246be155c49dc2eaf89aa148b 770 Pfam PF00773 RNB domain 255 576 1.8E-99 T 14-09-2016 AY555_RS09165 68b9656246be155c49dc2eaf89aa148b 770 SMART SM00955 255 581 1.2E-159 T 14-09-2016 AY555_RS09165 68b9656246be155c49dc2eaf89aa148b 770 PANTHER PTHR23355 164 712 4.4E-165 T 14-09-2016 AY555_RS09165 68b9656246be155c49dc2eaf89aa148b 770 Pfam PF00575 S1 RNA binding domain 629 711 1.6E-10 T 14-09-2016 IPR003029 S1 domain GO:0003676 AY555_RS09165 68b9656246be155c49dc2eaf89aa148b 770 SUPERFAMILY SSF50249 224 628 1.43E-133 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS09165 68b9656246be155c49dc2eaf89aa148b 770 SMART SM00316 629 712 3.1E-10 T 14-09-2016 IPR022967 RNA-binding domain, S1 AY555_RS09165 68b9656246be155c49dc2eaf89aa148b 770 Gene3D G3DSA:2.40.50.140 632 714 1.3E-13 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS09165 68b9656246be155c49dc2eaf89aa148b 770 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 121 712 3.0E-151 T 14-09-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 AY555_RS09165 68b9656246be155c49dc2eaf89aa148b 770 SUPERFAMILY SSF50249 629 712 4.44E-18 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS09165 68b9656246be155c49dc2eaf89aa148b 770 PANTHER PTHR23355:SF9 164 712 4.4E-165 T 14-09-2016 AY555_RS09165 68b9656246be155c49dc2eaf89aa148b 770 TIGRFAM TIGR02063 RNase_R: ribonuclease R 12 712 6.3E-210 T 14-09-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AY555_RS01650 cf387dab0af3333a28fb125500248308 220 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 17 176 2.4E-37 T 14-09-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AY555_RS01650 cf387dab0af3333a28fb125500248308 220 PANTHER PTHR33692 15 180 2.7E-33 T 14-09-2016 AY555_RS01650 cf387dab0af3333a28fb125500248308 220 Pfam PF01782 RimM N-terminal domain 18 98 6.7E-19 T 14-09-2016 IPR002676 RimM protein GO:0006364 AY555_RS01650 cf387dab0af3333a28fb125500248308 220 Gene3D G3DSA:2.40.30.60 13 100 4.1E-20 T 14-09-2016 IPR002676 RimM protein GO:0006364 AY555_RS01650 cf387dab0af3333a28fb125500248308 220 PANTHER PTHR33692:SF1 15 180 2.7E-33 T 14-09-2016 AY555_RS01650 cf387dab0af3333a28fb125500248308 220 Gene3D G3DSA:2.30.30.240 108 176 1.7E-15 T 14-09-2016 AY555_RS01650 cf387dab0af3333a28fb125500248308 220 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 16 178 23.097 T 14-09-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AY555_RS01650 cf387dab0af3333a28fb125500248308 220 SUPERFAMILY SSF50447 16 100 7.06E-19 T 14-09-2016 IPR009000 Translation protein, beta-barrel domain AY555_RS01650 cf387dab0af3333a28fb125500248308 220 Pfam PF05239 PRC-barrel domain 105 178 1.8E-10 T 14-09-2016 IPR027275 PRC-barrel domain AY555_RS01650 cf387dab0af3333a28fb125500248308 220 SUPERFAMILY SSF50346 108 177 3.34E-15 T 14-09-2016 IPR011033 PRC-barrel-like AY555_RS06005 e1bcffd67d87e09f49c7e1eb8f635299 243 Gene3D G3DSA:2.150.10.10 67 164 3.8E-19 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS06005 e1bcffd67d87e09f49c7e1eb8f635299 243 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 95 113 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS06005 e1bcffd67d87e09f49c7e1eb8f635299 243 PRINTS PR00313 NodO calcium binding signature 108 116 1.8E-6 T 14-09-2016 AY555_RS06005 e1bcffd67d87e09f49c7e1eb8f635299 243 PRINTS PR00313 NodO calcium binding signature 126 135 1.8E-6 T 14-09-2016 AY555_RS06005 e1bcffd67d87e09f49c7e1eb8f635299 243 PRINTS PR00313 NodO calcium binding signature 87 98 1.8E-6 T 14-09-2016 AY555_RS06005 e1bcffd67d87e09f49c7e1eb8f635299 243 PRINTS PR00313 NodO calcium binding signature 99 107 1.8E-6 T 14-09-2016 AY555_RS06005 e1bcffd67d87e09f49c7e1eb8f635299 243 SUPERFAMILY SSF51120 64 161 2.09E-21 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS04185 5c11db0feb95289d1ca0a2e1925660bd 299 SMART SM01091 209 291 1.3E-18 T 14-09-2016 IPR005170 Transporter-associated domain AY555_RS04185 5c11db0feb95289d1ca0a2e1925660bd 299 Gene3D G3DSA:3.30.465.10 188 289 4.8E-24 T 14-09-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AY555_RS04185 5c11db0feb95289d1ca0a2e1925660bd 299 Pfam PF03471 Transporter associated domain 212 289 4.0E-17 T 14-09-2016 IPR005170 Transporter-associated domain AY555_RS04185 5c11db0feb95289d1ca0a2e1925660bd 299 SUPERFAMILY SSF54631 69 203 1.05E-31 T 14-09-2016 AY555_RS04185 5c11db0feb95289d1ca0a2e1925660bd 299 SUPERFAMILY SSF56176 208 293 2.4E-17 T 14-09-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AY555_RS04185 5c11db0feb95289d1ca0a2e1925660bd 299 PANTHER PTHR22777 18 299 2.7E-82 T 14-09-2016 AY555_RS04185 5c11db0feb95289d1ca0a2e1925660bd 299 SMART SM00116 145 193 12.0 T 14-09-2016 IPR000644 CBS domain AY555_RS04185 5c11db0feb95289d1ca0a2e1925660bd 299 SMART SM00116 83 132 1.9 T 14-09-2016 IPR000644 CBS domain AY555_RS04185 5c11db0feb95289d1ca0a2e1925660bd 299 Gene3D G3DSA:3.10.580.10 64 187 1.6E-20 T 14-09-2016 AY555_RS04185 5c11db0feb95289d1ca0a2e1925660bd 299 Pfam PF00571 CBS domain 80 128 2.8E-4 T 14-09-2016 IPR000644 CBS domain AY555_RS04185 5c11db0feb95289d1ca0a2e1925660bd 299 Pfam PF00571 CBS domain 144 192 2.2E-4 T 14-09-2016 IPR000644 CBS domain AY555_RS03420 efebb0379e438448f782ced9a3b3238e 831 SUPERFAMILY SSF52540 320 565 2.88E-12 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS03420 efebb0379e438448f782ced9a3b3238e 831 SUPERFAMILY SSF52540 44 113 2.88E-12 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS03420 efebb0379e438448f782ced9a3b3238e 831 PANTHER PTHR10046 125 776 3.8E-112 T 14-09-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 AY555_RS03420 efebb0379e438448f782ced9a3b3238e 831 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 665 766 2.7E-7 T 14-09-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 AY555_RS03420 efebb0379e438448f782ced9a3b3238e 831 SUPERFAMILY SSF54211 580 772 1.14E-31 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AY555_RS03420 efebb0379e438448f782ced9a3b3238e 831 Gene3D G3DSA:3.30.230.10 573 771 3.1E-28 T 14-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AY555_RS03420 efebb0379e438448f782ced9a3b3238e 831 PANTHER PTHR10046:SF46 125 776 3.8E-112 T 14-09-2016 AY555_RS03420 efebb0379e438448f782ced9a3b3238e 831 Pfam PF13654 AAA domain 40 555 2.8E-179 T 14-09-2016 AY555_RS03420 efebb0379e438448f782ced9a3b3238e 831 Gene3D G3DSA:3.40.50.300 44 93 2.4E-7 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS03420 efebb0379e438448f782ced9a3b3238e 831 Gene3D G3DSA:3.40.50.300 301 438 2.4E-7 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS03420 efebb0379e438448f782ced9a3b3238e 831 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 70 89 8.3E-13 T 14-09-2016 AY555_RS03420 efebb0379e438448f782ced9a3b3238e 831 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 581 597 8.3E-13 T 14-09-2016 AY555_RS03420 efebb0379e438448f782ced9a3b3238e 831 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 662 681 8.3E-13 T 14-09-2016 AY555_RS03420 efebb0379e438448f782ced9a3b3238e 831 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 722 740 8.3E-13 T 14-09-2016 AY555_RS03420 efebb0379e438448f782ced9a3b3238e 831 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 692 711 8.3E-13 T 14-09-2016 AY555_RS09385 27753202c7ec4f34139d434168c35022 267 PANTHER PTHR13696 24 265 9.1E-56 T 14-09-2016 AY555_RS09385 27753202c7ec4f34139d434168c35022 267 PANTHER PTHR13696:SF3 24 265 9.1E-56 T 14-09-2016 AY555_RS09385 27753202c7ec4f34139d434168c35022 267 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 26 212 1.3E-17 T 14-09-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AY555_RS09385 27753202c7ec4f34139d434168c35022 267 Gene3D G3DSA:3.40.50.300 23 265 3.5E-43 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS09385 27753202c7ec4f34139d434168c35022 267 SUPERFAMILY SSF52540 24 265 9.41E-40 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS09385 27753202c7ec4f34139d434168c35022 267 PIRSF PIRSF003092 8 267 1.6E-58 T 14-09-2016 IPR025501 ATP binding protein MinD AY555_RS03675 7e3489421f9db88e751547ff0c0f5d9b 219 PANTHER PTHR21237 34 196 6.3E-58 T 14-09-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 AY555_RS03675 7e3489421f9db88e751547ff0c0f5d9b 219 Gene3D G3DSA:2.30.22.10 137 194 1.3E-23 T 14-09-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 AY555_RS03675 7e3489421f9db88e751547ff0c0f5d9b 219 PRINTS PR00773 GrpE protein signature 86 101 7.3E-20 T 14-09-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 AY555_RS03675 7e3489421f9db88e751547ff0c0f5d9b 219 PRINTS PR00773 GrpE protein signature 145 160 7.3E-20 T 14-09-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 AY555_RS03675 7e3489421f9db88e751547ff0c0f5d9b 219 PRINTS PR00773 GrpE protein signature 58 74 7.3E-20 T 14-09-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 AY555_RS03675 7e3489421f9db88e751547ff0c0f5d9b 219 PRINTS PR00773 GrpE protein signature 172 191 7.3E-20 T 14-09-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 AY555_RS03675 7e3489421f9db88e751547ff0c0f5d9b 219 Gene3D G3DSA:3.90.20.20 34 136 1.4E-25 T 14-09-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil AY555_RS03675 7e3489421f9db88e751547ff0c0f5d9b 219 Hamap MF_01151 Protein GrpE [grpE]. 24 193 17.874 T 14-09-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 AY555_RS03675 7e3489421f9db88e751547ff0c0f5d9b 219 Pfam PF01025 GrpE 30 193 4.7E-50 T 14-09-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 AY555_RS03675 7e3489421f9db88e751547ff0c0f5d9b 219 SUPERFAMILY SSF58014 39 137 1.22E-22 T 14-09-2016 AY555_RS03675 7e3489421f9db88e751547ff0c0f5d9b 219 SUPERFAMILY SSF51064 138 194 1.24E-16 T 14-09-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 AY555_RS04650 cd6954aa59d234e26d24969dbee802ab 254 PANTHER PTHR13887 82 247 1.4E-27 T 14-09-2016 AY555_RS04650 cd6954aa59d234e26d24969dbee802ab 254 SUPERFAMILY SSF52833 82 244 2.77E-34 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS04650 cd6954aa59d234e26d24969dbee802ab 254 PANTHER PTHR13887:SF14 82 247 1.4E-27 T 14-09-2016 AY555_RS04650 cd6954aa59d234e26d24969dbee802ab 254 Gene3D G3DSA:3.40.30.10 81 160 3.0E-28 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS04650 cd6954aa59d234e26d24969dbee802ab 254 Pfam PF13462 Thioredoxin 81 244 1.0E-38 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS04650 cd6954aa59d234e26d24969dbee802ab 254 Gene3D G3DSA:3.40.30.10 161 245 2.5E-5 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS06855 33e47cf4f3753a957c639ae75d40910d 421 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 12 161 3.3E-38 T 14-09-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 AY555_RS06855 33e47cf4f3753a957c639ae75d40910d 421 PANTHER PTHR21089:SF3 88 261 3.2E-67 T 14-09-2016 AY555_RS06855 33e47cf4f3753a957c639ae75d40910d 421 PANTHER PTHR21089:SF3 277 364 3.2E-67 T 14-09-2016 AY555_RS06855 33e47cf4f3753a957c639ae75d40910d 421 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 10 401 2.7E-87 T 14-09-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 AY555_RS06855 33e47cf4f3753a957c639ae75d40910d 421 PANTHER PTHR21089 88 261 3.2E-67 T 14-09-2016 AY555_RS06855 33e47cf4f3753a957c639ae75d40910d 421 PANTHER PTHR21089 277 364 3.2E-67 T 14-09-2016 AY555_RS06855 33e47cf4f3753a957c639ae75d40910d 421 SUPERFAMILY SSF69742 9 163 1.2E-36 T 14-09-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 AY555_RS06855 33e47cf4f3753a957c639ae75d40910d 421 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 326 415 2.7E-7 T 14-09-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 AY555_RS06855 33e47cf4f3753a957c639ae75d40910d 421 SUPERFAMILY SSF69075 322 409 5.1E-9 T 14-09-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 AY555_RS06855 33e47cf4f3753a957c639ae75d40910d 421 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 8 415 23.73 T 14-09-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 AY555_RS06855 33e47cf4f3753a957c639ae75d40910d 421 SUPERFAMILY SSF51735 168 318 1.89E-20 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS06855 33e47cf4f3753a957c639ae75d40910d 421 Gene3D G3DSA:3.40.50.720 169 315 1.7E-20 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS06855 33e47cf4f3753a957c639ae75d40910d 421 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 177 311 1.2E-23 T 14-09-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AY555_RS06855 33e47cf4f3753a957c639ae75d40910d 421 PIRSF PIRSF000445 7 421 1.1E-108 T 14-09-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 AY555_RS04785 6f46da8b6edd35209dacd17ac7e65073 466 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 14-09-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AY555_RS04785 6f46da8b6edd35209dacd17ac7e65073 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 139 148 1.4E-78 T 14-09-2016 AY555_RS04785 6f46da8b6edd35209dacd17ac7e65073 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 1.4E-78 T 14-09-2016 AY555_RS04785 6f46da8b6edd35209dacd17ac7e65073 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 1.4E-78 T 14-09-2016 AY555_RS04785 6f46da8b6edd35209dacd17ac7e65073 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 1.4E-78 T 14-09-2016 AY555_RS04785 6f46da8b6edd35209dacd17ac7e65073 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 175 200 1.4E-78 T 14-09-2016 AY555_RS04785 6f46da8b6edd35209dacd17ac7e65073 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 1.4E-78 T 14-09-2016 AY555_RS04785 6f46da8b6edd35209dacd17ac7e65073 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 1.4E-78 T 14-09-2016 AY555_RS04785 6f46da8b6edd35209dacd17ac7e65073 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.4E-78 T 14-09-2016 AY555_RS04785 6f46da8b6edd35209dacd17ac7e65073 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 1.4E-78 T 14-09-2016 AY555_RS04785 6f46da8b6edd35209dacd17ac7e65073 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 7.9E-39 T 14-09-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AY555_RS04785 6f46da8b6edd35209dacd17ac7e65073 466 Gene3D G3DSA:3.50.50.60 3 139 7.6E-46 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS04785 6f46da8b6edd35209dacd17ac7e65073 466 PANTHER PTHR22912:SF151 2 459 2.1E-258 T 14-09-2016 AY555_RS04785 6f46da8b6edd35209dacd17ac7e65073 466 SUPERFAMILY SSF51905 1 322 2.12E-64 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS04785 6f46da8b6edd35209dacd17ac7e65073 466 PANTHER PTHR22912 2 459 2.1E-258 T 14-09-2016 AY555_RS04785 6f46da8b6edd35209dacd17ac7e65073 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 328 1.0E-73 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS04785 6f46da8b6edd35209dacd17ac7e65073 466 PIRSF PIRSF000350 1 462 5.5E-85 T 14-09-2016 AY555_RS04785 6f46da8b6edd35209dacd17ac7e65073 466 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 5 466 4.5E-171 T 14-09-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 AY555_RS04785 6f46da8b6edd35209dacd17ac7e65073 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 5.4E-41 T 14-09-2016 AY555_RS04785 6f46da8b6edd35209dacd17ac7e65073 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 136 154 5.4E-41 T 14-09-2016 AY555_RS04785 6f46da8b6edd35209dacd17ac7e65073 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 5.4E-41 T 14-09-2016 AY555_RS04785 6f46da8b6edd35209dacd17ac7e65073 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 5.4E-41 T 14-09-2016 AY555_RS04785 6f46da8b6edd35209dacd17ac7e65073 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 175 193 5.4E-41 T 14-09-2016 AY555_RS04785 6f46da8b6edd35209dacd17ac7e65073 466 SUPERFAMILY SSF55424 344 465 5.5E-41 T 14-09-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AY555_RS04785 6f46da8b6edd35209dacd17ac7e65073 466 Gene3D G3DSA:3.50.50.60 140 334 8.9E-54 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS04785 6f46da8b6edd35209dacd17ac7e65073 466 Gene3D G3DSA:3.30.390.30 335 464 1.4E-48 T 14-09-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AY555_RS09435 49016b11230f8c1467e92fe2e26ae0a1 294 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 6 290 1.9E-74 T 14-09-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AY555_RS09435 49016b11230f8c1467e92fe2e26ae0a1 294 Pfam PF08543 Phosphomethylpyrimidine kinase 79 264 2.0E-19 T 14-09-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 AY555_RS09435 49016b11230f8c1467e92fe2e26ae0a1 294 Gene3D G3DSA:3.40.1190.20 5 289 3.1E-76 T 14-09-2016 IPR029056 Ribokinase-like AY555_RS09435 49016b11230f8c1467e92fe2e26ae0a1 294 SUPERFAMILY SSF53613 6 279 9.98E-61 T 14-09-2016 IPR029056 Ribokinase-like AY555_RS09435 49016b11230f8c1467e92fe2e26ae0a1 294 PANTHER PTHR10534 1 294 3.3E-81 T 14-09-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AY555_RS05810 70c43c481829284a936af994b31caa93 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.3E-23 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS05810 70c43c481829284a936af994b31caa93 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.3E-23 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS05810 70c43c481829284a936af994b31caa93 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.3E-23 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS05810 70c43c481829284a936af994b31caa93 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.3E-23 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS05810 70c43c481829284a936af994b31caa93 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.3E-23 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS05810 70c43c481829284a936af994b31caa93 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.9E-5 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS05810 70c43c481829284a936af994b31caa93 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.9E-5 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS05810 70c43c481829284a936af994b31caa93 243 Pfam PF00106 short chain dehydrogenase 9 201 3.2E-47 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS05810 70c43c481829284a936af994b31caa93 243 PANTHER PTHR24322:SF320 158 189 6.7E-41 T 14-09-2016 AY555_RS05810 70c43c481829284a936af994b31caa93 243 PANTHER PTHR24322:SF320 12 142 6.7E-41 T 14-09-2016 AY555_RS05810 70c43c481829284a936af994b31caa93 243 SUPERFAMILY SSF51735 3 226 2.67E-58 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS05810 70c43c481829284a936af994b31caa93 243 PANTHER PTHR24322 158 189 6.7E-41 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS05810 70c43c481829284a936af994b31caa93 243 PANTHER PTHR24322 12 142 6.7E-41 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS05810 70c43c481829284a936af994b31caa93 243 Gene3D G3DSA:3.40.50.720 3 206 1.2E-59 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS05810 70c43c481829284a936af994b31caa93 243 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 14-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AY555_RS03585 4abd19b1a1d2029b3a168292b8143c66 309 SUPERFAMILY SSF51735 2 141 1.02E-45 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS03585 4abd19b1a1d2029b3a168292b8143c66 309 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 169 175 - T 14-09-2016 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 AY555_RS03585 4abd19b1a1d2029b3a168292b8143c66 309 PRINTS PR00086 L-lactate dehydrogenase signature 113 133 6.2E-42 T 14-09-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AY555_RS03585 4abd19b1a1d2029b3a168292b8143c66 309 PRINTS PR00086 L-lactate dehydrogenase signature 2 26 6.2E-42 T 14-09-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AY555_RS03585 4abd19b1a1d2029b3a168292b8143c66 309 PRINTS PR00086 L-lactate dehydrogenase signature 137 155 6.2E-42 T 14-09-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AY555_RS03585 4abd19b1a1d2029b3a168292b8143c66 309 PRINTS PR00086 L-lactate dehydrogenase signature 167 180 6.2E-42 T 14-09-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AY555_RS03585 4abd19b1a1d2029b3a168292b8143c66 309 PRINTS PR00086 L-lactate dehydrogenase signature 27 51 6.2E-42 T 14-09-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AY555_RS03585 4abd19b1a1d2029b3a168292b8143c66 309 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 5 301 4.5E-102 T 14-09-2016 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 AY555_RS03585 4abd19b1a1d2029b3a168292b8143c66 309 Gene3D G3DSA:3.90.110.10 143 302 8.5E-44 T 14-09-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AY555_RS03585 4abd19b1a1d2029b3a168292b8143c66 309 PANTHER PTHR11540:SF3 1 301 5.5E-117 T 14-09-2016 AY555_RS03585 4abd19b1a1d2029b3a168292b8143c66 309 PIRSF PIRSF000102 1 306 3.1E-89 T 14-09-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AY555_RS03585 4abd19b1a1d2029b3a168292b8143c66 309 PANTHER PTHR11540 1 301 5.5E-117 T 14-09-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AY555_RS03585 4abd19b1a1d2029b3a168292b8143c66 309 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 142 303 8.9E-18 T 14-09-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 AY555_RS03585 4abd19b1a1d2029b3a168292b8143c66 309 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 1 309 35.851 T 14-09-2016 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 AY555_RS03585 4abd19b1a1d2029b3a168292b8143c66 309 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 139 1.1E-35 T 14-09-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 AY555_RS03585 4abd19b1a1d2029b3a168292b8143c66 309 Gene3D G3DSA:3.40.50.720 1 142 1.5E-48 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS03585 4abd19b1a1d2029b3a168292b8143c66 309 SUPERFAMILY SSF56327 140 303 1.28E-42 T 14-09-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AY555_RS08385 3fdfa1edfa3772acdf840031aa923ab8 906 TIGRFAM TIGR00422 valS: valine--tRNA ligase 3 885 0.0 T 14-09-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AY555_RS08385 3fdfa1edfa3772acdf840031aa923ab8 906 Gene3D G3DSA:3.90.740.10 194 363 8.2E-44 T 14-09-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 AY555_RS08385 3fdfa1edfa3772acdf840031aa923ab8 906 SUPERFAMILY SSF46589 840 902 5.18E-14 T 14-09-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 AY555_RS08385 3fdfa1edfa3772acdf840031aa923ab8 906 PRINTS PR00986 Valyl-tRNA synthetase signature 373 386 1.3E-37 T 14-09-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AY555_RS08385 3fdfa1edfa3772acdf840031aa923ab8 906 PRINTS PR00986 Valyl-tRNA synthetase signature 36 47 1.3E-37 T 14-09-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AY555_RS08385 3fdfa1edfa3772acdf840031aa923ab8 906 PRINTS PR00986 Valyl-tRNA synthetase signature 231 248 1.3E-37 T 14-09-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AY555_RS08385 3fdfa1edfa3772acdf840031aa923ab8 906 PRINTS PR00986 Valyl-tRNA synthetase signature 506 524 1.3E-37 T 14-09-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AY555_RS08385 3fdfa1edfa3772acdf840031aa923ab8 906 PRINTS PR00986 Valyl-tRNA synthetase signature 475 496 1.3E-37 T 14-09-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AY555_RS08385 3fdfa1edfa3772acdf840031aa923ab8 906 Gene3D G3DSA:1.10.730.10 594 773 1.9E-58 T 14-09-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS08385 3fdfa1edfa3772acdf840031aa923ab8 906 SUPERFAMILY SSF52374 368 604 1.99E-140 T 14-09-2016 AY555_RS08385 3fdfa1edfa3772acdf840031aa923ab8 906 SUPERFAMILY SSF52374 3 192 1.99E-140 T 14-09-2016 AY555_RS08385 3fdfa1edfa3772acdf840031aa923ab8 906 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 15 594 3.0E-198 T 14-09-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS08385 3fdfa1edfa3772acdf840031aa923ab8 906 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 54 - T 14-09-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS08385 3fdfa1edfa3772acdf840031aa923ab8 906 PANTHER PTHR11946:SF5 337 817 0.0 T 14-09-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AY555_RS08385 3fdfa1edfa3772acdf840031aa923ab8 906 SUPERFAMILY SSF50677 191 369 5.76E-55 T 14-09-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 AY555_RS08385 3fdfa1edfa3772acdf840031aa923ab8 906 Gene3D G3DSA:3.40.50.620 4 193 5.4E-144 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS08385 3fdfa1edfa3772acdf840031aa923ab8 906 Gene3D G3DSA:3.40.50.620 368 592 5.4E-144 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS08385 3fdfa1edfa3772acdf840031aa923ab8 906 PANTHER PTHR11946 337 817 0.0 T 14-09-2016 AY555_RS08385 3fdfa1edfa3772acdf840031aa923ab8 906 PANTHER PTHR11946 836 898 0.0 T 14-09-2016 AY555_RS08385 3fdfa1edfa3772acdf840031aa923ab8 906 PANTHER PTHR11946 2 309 0.0 T 14-09-2016 AY555_RS08385 3fdfa1edfa3772acdf840031aa923ab8 906 PANTHER PTHR11946:SF5 836 898 0.0 T 14-09-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AY555_RS08385 3fdfa1edfa3772acdf840031aa923ab8 906 PANTHER PTHR11946:SF5 2 309 0.0 T 14-09-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AY555_RS08385 3fdfa1edfa3772acdf840031aa923ab8 906 Pfam PF08264 Anticodon-binding domain of tRNA 636 781 2.3E-39 T 14-09-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 AY555_RS08385 3fdfa1edfa3772acdf840031aa923ab8 906 Hamap MF_02004 Valine--tRNA ligase [valS]. 2 905 15.781 T 14-09-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AY555_RS08385 3fdfa1edfa3772acdf840031aa923ab8 906 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 840 902 9.4E-19 T 14-09-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 AY555_RS08385 3fdfa1edfa3772acdf840031aa923ab8 906 SUPERFAMILY SSF47323 607 855 8.6E-55 T 14-09-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS08385 3fdfa1edfa3772acdf840031aa923ab8 906 Gene3D G3DSA:1.10.287.380 833 902 1.8E-7 T 14-09-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 AY555_RS04150 0d689cf391f0a7b7612303e0b3a81507 256 Gene3D G3DSA:3.90.550.10 7 240 2.9E-44 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AY555_RS04150 0d689cf391f0a7b7612303e0b3a81507 256 PANTHER PTHR22572:SF15 7 230 7.5E-39 T 14-09-2016 AY555_RS04150 0d689cf391f0a7b7612303e0b3a81507 256 Pfam PF12804 MobA-like NTP transferase domain 8 138 1.5E-14 T 14-09-2016 IPR025877 MobA-like NTP transferase AY555_RS04150 0d689cf391f0a7b7612303e0b3a81507 256 PANTHER PTHR22572 7 230 7.5E-39 T 14-09-2016 AY555_RS04150 0d689cf391f0a7b7612303e0b3a81507 256 SUPERFAMILY SSF53448 6 241 3.6E-42 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AY555_RS02020 83885fca456305275a029a45f4f76d2b 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 215 1.8E-22 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AY555_RS02020 83885fca456305275a029a45f4f76d2b 227 PANTHER PTHR26402 1 222 1.7E-93 T 14-09-2016 AY555_RS02020 83885fca456305275a029a45f4f76d2b 227 Gene3D G3DSA:1.10.10.10 124 216 1.1E-27 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS02020 83885fca456305275a029a45f4f76d2b 227 SUPERFAMILY SSF52172 1 181 1.07E-37 T 14-09-2016 IPR011006 CheY-like superfamily AY555_RS02020 83885fca456305275a029a45f4f76d2b 227 Gene3D G3DSA:3.40.50.2300 1 123 1.0E-34 T 14-09-2016 AY555_RS02020 83885fca456305275a029a45f4f76d2b 227 Pfam PF00072 Response regulator receiver domain 4 113 1.3E-22 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS02020 83885fca456305275a029a45f4f76d2b 227 SMART SM00862 145 216 5.5E-25 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AY555_RS02020 83885fca456305275a029a45f4f76d2b 227 PANTHER PTHR26402:SF316 1 222 1.7E-93 T 14-09-2016 AY555_RS02020 83885fca456305275a029a45f4f76d2b 227 SMART SM00448 1 112 2.0E-35 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS06225 58250d79726a731604f1fa1b37d46b8f 293 Gene3D G3DSA:3.40.50.1820 52 272 1.7E-41 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AY555_RS06225 58250d79726a731604f1fa1b37d46b8f 293 PANTHER PTHR12277 10 256 5.0E-60 T 14-09-2016 AY555_RS06225 58250d79726a731604f1fa1b37d46b8f 293 Pfam PF12146 Serine aminopeptidase, S33 75 196 1.1E-10 T 14-09-2016 IPR022742 Serine aminopeptidase, S33 AY555_RS06225 58250d79726a731604f1fa1b37d46b8f 293 SUPERFAMILY SSF53474 30 262 8.37E-43 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AY555_RS01920 6ca41038be1fa092ae5790a0b9024e11 281 SMART SM00062 46 271 1.0E-41 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AY555_RS01920 6ca41038be1fa092ae5790a0b9024e11 281 SUPERFAMILY SSF53850 16 269 2.11E-53 T 14-09-2016 AY555_RS01920 6ca41038be1fa092ae5790a0b9024e11 281 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 47 269 9.9E-48 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AY555_RS01920 6ca41038be1fa092ae5790a0b9024e11 281 PANTHER PTHR18966 32 273 5.9E-29 T 14-09-2016 AY555_RS01920 6ca41038be1fa092ae5790a0b9024e11 281 SMART SM00079 46 270 5.6E-4 T 14-09-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AY555_RS01920 6ca41038be1fa092ae5790a0b9024e11 281 Gene3D G3DSA:3.40.190.10 228 270 2.0E-31 T 14-09-2016 AY555_RS01920 6ca41038be1fa092ae5790a0b9024e11 281 Gene3D G3DSA:3.40.190.10 44 122 2.0E-31 T 14-09-2016 AY555_RS01920 6ca41038be1fa092ae5790a0b9024e11 281 Gene3D G3DSA:3.40.190.10 123 221 2.4E-19 T 14-09-2016 AY555_RS03275 984a11b71c6f3db01405000a36b73dfe 42 Pfam PF04995 Heme exporter protein D (CcmD) 4 41 2.2E-12 T 14-09-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 AY555_RS03275 984a11b71c6f3db01405000a36b73dfe 42 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 1 42 6.3E-17 T 14-09-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 AY555_RS09070 532a19b6d5ce0851968e58e583f0316e 371 PANTHER PTHR24031:SF261 1 368 1.3E-171 T 14-09-2016 AY555_RS09070 532a19b6d5ce0851968e58e583f0316e 371 Gene3D G3DSA:3.40.50.300 210 369 3.2E-50 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS09070 532a19b6d5ce0851968e58e583f0316e 371 Pfam PF00270 DEAD/DEAH box helicase 25 193 1.6E-51 T 14-09-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AY555_RS09070 532a19b6d5ce0851968e58e583f0316e 371 SUPERFAMILY SSF52540 73 356 3.02E-74 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS09070 532a19b6d5ce0851968e58e583f0316e 371 SMART SM00487 20 220 4.0E-62 T 14-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AY555_RS09070 532a19b6d5ce0851968e58e583f0316e 371 SMART SM00490 256 337 7.2E-32 T 14-09-2016 IPR001650 Helicase, C-terminal AY555_RS09070 532a19b6d5ce0851968e58e583f0316e 371 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 14-09-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AY555_RS09070 532a19b6d5ce0851968e58e583f0316e 371 PANTHER PTHR24031 1 368 1.3E-171 T 14-09-2016 AY555_RS09070 532a19b6d5ce0851968e58e583f0316e 371 SUPERFAMILY SSF52540 23 98 2.3E-5 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS09070 532a19b6d5ce0851968e58e583f0316e 371 Pfam PF00271 Helicase conserved C-terminal domain 229 337 7.2E-28 T 14-09-2016 IPR001650 Helicase, C-terminal AY555_RS09070 532a19b6d5ce0851968e58e583f0316e 371 Gene3D G3DSA:3.40.50.300 1 209 3.7E-80 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS03525 030661651c5289bab72bef470f732a16 512 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 66 236 1.9E-27 T 14-09-2016 AY555_RS03525 030661651c5289bab72bef470f732a16 512 PANTHER PTHR33908:SF1 20 427 7.4E-37 T 14-09-2016 AY555_RS03525 030661651c5289bab72bef470f732a16 512 PANTHER PTHR33908 20 427 7.4E-37 T 14-09-2016 AY555_RS03790 ecaf73259a940be13886af1946dc81f9 162 Gene3D G3DSA:1.10.260.40 29 101 4.9E-18 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AY555_RS03790 ecaf73259a940be13886af1946dc81f9 162 PANTHER PTHR10245:SF38 4 94 2.3E-29 T 14-09-2016 AY555_RS03790 ecaf73259a940be13886af1946dc81f9 162 SUPERFAMILY SSF47413 26 102 3.75E-26 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AY555_RS03790 ecaf73259a940be13886af1946dc81f9 162 PANTHER PTHR10245 4 94 2.3E-29 T 14-09-2016 AY555_RS03790 ecaf73259a940be13886af1946dc81f9 162 SMART SM00530 36 91 2.0E-14 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AY555_RS03790 ecaf73259a940be13886af1946dc81f9 162 Pfam PF01381 Helix-turn-helix 37 90 1.3E-13 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AY555_RS00345 d99b195cc2b0df71b04edfcc16bef3cd 466 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 447 4.6E-206 T 14-09-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 AY555_RS00345 d99b195cc2b0df71b04edfcc16bef3cd 466 Pfam PF03315 Serine dehydratase beta chain 3 151 6.6E-53 T 14-09-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 AY555_RS00345 d99b195cc2b0df71b04edfcc16bef3cd 466 Pfam PF03313 Serine dehydratase alpha chain 180 444 1.9E-94 T 14-09-2016 IPR005130 Serine dehydratase-like, alpha subunit AY555_RS00345 d99b195cc2b0df71b04edfcc16bef3cd 466 PANTHER PTHR30182:SF5 1 458 3.0E-260 T 14-09-2016 AY555_RS00345 d99b195cc2b0df71b04edfcc16bef3cd 466 Gene3D G3DSA:3.30.1330.90 10 154 4.2E-51 T 14-09-2016 IPR029009 Allosteric substrate binding domain AY555_RS00345 d99b195cc2b0df71b04edfcc16bef3cd 466 PANTHER PTHR30182 1 458 3.0E-260 T 14-09-2016 AY555_RS00345 d99b195cc2b0df71b04edfcc16bef3cd 466 SUPERFAMILY SSF143548 16 154 9.68E-43 T 14-09-2016 IPR029009 Allosteric substrate binding domain AY555_RS07875 4f2e5292e3ba57a8e8742cae576a694b 303 Gene3D G3DSA:3.40.190.10 95 174 2.5E-17 T 14-09-2016 AY555_RS07875 4f2e5292e3ba57a8e8742cae576a694b 303 Gene3D G3DSA:1.10.10.10 3 86 3.2E-26 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS07875 4f2e5292e3ba57a8e8742cae576a694b 303 Pfam PF03466 LysR substrate binding domain 93 291 6.1E-21 T 14-09-2016 IPR005119 LysR, substrate-binding AY555_RS07875 4f2e5292e3ba57a8e8742cae576a694b 303 SUPERFAMILY SSF46785 5 86 8.18E-22 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS07875 4f2e5292e3ba57a8e8742cae576a694b 303 PANTHER PTHR30537:SF26 1 302 2.9E-88 T 14-09-2016 AY555_RS07875 4f2e5292e3ba57a8e8742cae576a694b 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 6.6E-20 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AY555_RS07875 4f2e5292e3ba57a8e8742cae576a694b 303 PANTHER PTHR30537 1 302 2.9E-88 T 14-09-2016 AY555_RS07875 4f2e5292e3ba57a8e8742cae576a694b 303 Gene3D G3DSA:3.40.190.10 175 260 1.9E-17 T 14-09-2016 AY555_RS07875 4f2e5292e3ba57a8e8742cae576a694b 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 8.6E-6 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AY555_RS07875 4f2e5292e3ba57a8e8742cae576a694b 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 8.6E-6 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AY555_RS07875 4f2e5292e3ba57a8e8742cae576a694b 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 8.6E-6 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AY555_RS07875 4f2e5292e3ba57a8e8742cae576a694b 303 SUPERFAMILY SSF53850 93 294 3.08E-23 T 14-09-2016 AY555_RS06350 ffb47460ca4458f126727f894b89ad31 474 SUPERFAMILY SSF46626 332 474 8.47E-24 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AY555_RS06350 ffb47460ca4458f126727f894b89ad31 474 Gene3D G3DSA:1.10.760.10 336 474 1.2E-17 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AY555_RS06350 ffb47460ca4458f126727f894b89ad31 474 PIRSF PIRSF028099 17 474 1.9E-165 T 14-09-2016 IPR010538 Di-haem oxidoreductase, putative peroxidase AY555_RS06350 ffb47460ca4458f126727f894b89ad31 474 PANTHER PTHR30600 38 101 8.8E-116 T 14-09-2016 AY555_RS06350 ffb47460ca4458f126727f894b89ad31 474 PANTHER PTHR30600 180 228 8.8E-116 T 14-09-2016 AY555_RS06350 ffb47460ca4458f126727f894b89ad31 474 PANTHER PTHR30600 253 474 8.8E-116 T 14-09-2016 AY555_RS06350 ffb47460ca4458f126727f894b89ad31 474 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 40 474 1.3E-126 T 14-09-2016 IPR010538 Di-haem oxidoreductase, putative peroxidase AY555_RS06350 ffb47460ca4458f126727f894b89ad31 474 PANTHER PTHR30600:SF4 38 101 8.8E-116 T 14-09-2016 AY555_RS06350 ffb47460ca4458f126727f894b89ad31 474 PANTHER PTHR30600:SF4 180 228 8.8E-116 T 14-09-2016 AY555_RS06350 ffb47460ca4458f126727f894b89ad31 474 PANTHER PTHR30600:SF4 253 474 8.8E-116 T 14-09-2016 AY555_RS08680 3dd8d171003d69eb8713c2105de57166 134 SUPERFAMILY SSF54593 1 133 3.22E-35 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AY555_RS08680 3dd8d171003d69eb8713c2105de57166 134 PANTHER PTHR21366 1 133 3.0E-63 T 14-09-2016 AY555_RS08680 3dd8d171003d69eb8713c2105de57166 134 Gene3D G3DSA:3.10.180.10 1 133 1.0E-43 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AY555_RS08680 3dd8d171003d69eb8713c2105de57166 134 PANTHER PTHR21366:SF9 1 133 3.0E-63 T 14-09-2016 AY555_RS08680 3dd8d171003d69eb8713c2105de57166 134 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 118 5.1E-21 T 14-09-2016 AY555_RS08680 3dd8d171003d69eb8713c2105de57166 134 TIGRFAM TIGR03081 metmalonyl_epim: methylmalonyl-CoA epimerase 4 133 2.3E-47 T 14-09-2016 IPR017515 Methylmalonyl-CoA epimerase KEGG: 00280+5.1.99.1|KEGG: 00630+5.1.99.1|KEGG: 00640+5.1.99.1|KEGG: 00720+5.1.99.1|MetaCyc: PWY-5741|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384 AY555_RS06945 e9e833b8c93469c0e746eda9bb783a35 310 PANTHER PTHR31223 123 301 2.6E-62 T 14-09-2016 AY555_RS06945 e9e833b8c93469c0e746eda9bb783a35 310 Pfam PF03641 Possible lysine decarboxylase 164 293 6.5E-30 T 14-09-2016 IPR031100 LOG family AY555_RS06945 e9e833b8c93469c0e746eda9bb783a35 310 Gene3D G3DSA:3.40.50.450 130 303 3.2E-64 T 14-09-2016 AY555_RS06945 e9e833b8c93469c0e746eda9bb783a35 310 Gene3D G3DSA:3.40.50.450 58 91 3.2E-64 T 14-09-2016 AY555_RS06945 e9e833b8c93469c0e746eda9bb783a35 310 SUPERFAMILY SSF102405 46 92 1.49E-49 T 14-09-2016 AY555_RS06945 e9e833b8c93469c0e746eda9bb783a35 310 SUPERFAMILY SSF102405 129 295 1.49E-49 T 14-09-2016 AY555_RS06945 e9e833b8c93469c0e746eda9bb783a35 310 PANTHER PTHR31223:SF1 123 301 2.6E-62 T 14-09-2016 AY555_RS07160 7e0cb7d0a1677f12950be082257f7714 380 Pfam PF02803 Thiolase, C-terminal domain 257 377 5.6E-47 T 14-09-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AY555_RS07160 7e0cb7d0a1677f12950be082257f7714 380 Pfam PF00108 Thiolase, N-terminal domain 4 249 2.9E-71 T 14-09-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AY555_RS07160 7e0cb7d0a1677f12950be082257f7714 380 PANTHER PTHR18919 1 380 1.7E-172 T 14-09-2016 AY555_RS07160 7e0cb7d0a1677f12950be082257f7714 380 Gene3D G3DSA:3.40.47.10 184 261 4.9E-61 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AY555_RS07160 7e0cb7d0a1677f12950be082257f7714 380 Gene3D G3DSA:3.40.47.10 4 125 4.9E-61 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AY555_RS07160 7e0cb7d0a1677f12950be082257f7714 380 Gene3D G3DSA:3.40.47.10 144 183 1.3E-64 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AY555_RS07160 7e0cb7d0a1677f12950be082257f7714 380 Gene3D G3DSA:3.40.47.10 263 377 1.3E-64 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AY555_RS07160 7e0cb7d0a1677f12950be082257f7714 380 SUPERFAMILY SSF53901 257 377 2.1E-42 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AY555_RS07160 7e0cb7d0a1677f12950be082257f7714 380 ProSitePatterns PS00737 Thiolases signature 2. 325 341 - T 14-09-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AY555_RS07160 7e0cb7d0a1677f12950be082257f7714 380 PANTHER PTHR18919:SF69 1 380 1.7E-172 T 14-09-2016 AY555_RS07160 7e0cb7d0a1677f12950be082257f7714 380 SUPERFAMILY SSF53901 2 251 6.96E-72 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AY555_RS07160 7e0cb7d0a1677f12950be082257f7714 380 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 14-09-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 AY555_RS07160 7e0cb7d0a1677f12950be082257f7714 380 PIRSF PIRSF000429 1 380 2.7E-130 T 14-09-2016 IPR002155 Thiolase GO:0008152|GO:0016747 AY555_RS07160 7e0cb7d0a1677f12950be082257f7714 380 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 377 7.7E-135 T 14-09-2016 IPR002155 Thiolase GO:0008152|GO:0016747 AY555_RS03630 7a91eae75b2d3d6fc03386db9a79f632 109 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 14-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AY555_RS03630 7a91eae75b2d3d6fc03386db9a79f632 109 PANTHER PTHR11938:SF101 1 82 2.2E-33 T 14-09-2016 AY555_RS03630 7a91eae75b2d3d6fc03386db9a79f632 109 SUPERFAMILY SSF54862 3 101 1.75E-23 T 14-09-2016 AY555_RS03630 7a91eae75b2d3d6fc03386db9a79f632 109 Pfam PF00037 4Fe-4S binding domain 34 55 1.6E-7 T 14-09-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AY555_RS03630 7a91eae75b2d3d6fc03386db9a79f632 109 PANTHER PTHR11938 1 82 2.2E-33 T 14-09-2016 AY555_RS03630 7a91eae75b2d3d6fc03386db9a79f632 109 Gene3D G3DSA:3.30.70.20 3 95 6.0E-21 T 14-09-2016 AY555_RS03630 7a91eae75b2d3d6fc03386db9a79f632 109 Pfam PF11953 Domain of unknown function (DUF3470) 65 101 5.1E-15 T 14-09-2016 IPR022569 Ferredoxin, C-terminal AY555_RS03630 7a91eae75b2d3d6fc03386db9a79f632 109 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.2E-18 T 14-09-2016 IPR000813 7Fe ferredoxin GO:0009055 AY555_RS03630 7a91eae75b2d3d6fc03386db9a79f632 109 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.2E-18 T 14-09-2016 IPR000813 7Fe ferredoxin GO:0009055 AY555_RS03630 7a91eae75b2d3d6fc03386db9a79f632 109 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.2E-18 T 14-09-2016 IPR000813 7Fe ferredoxin GO:0009055 AY555_RS00765 8e6547a3af5e5751ee4138cc348bea38 398 Pfam PF00108 Thiolase, N-terminal domain 9 265 2.6E-78 T 14-09-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AY555_RS00765 8e6547a3af5e5751ee4138cc348bea38 398 Gene3D G3DSA:3.40.47.10 281 395 1.1E-52 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AY555_RS00765 8e6547a3af5e5751ee4138cc348bea38 398 Gene3D G3DSA:3.40.47.10 147 199 1.1E-52 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AY555_RS00765 8e6547a3af5e5751ee4138cc348bea38 398 PANTHER PTHR18919:SF110 6 398 1.6E-204 T 14-09-2016 AY555_RS00765 8e6547a3af5e5751ee4138cc348bea38 398 PIRSF PIRSF000429 4 398 3.2E-107 T 14-09-2016 IPR002155 Thiolase GO:0008152|GO:0016747 AY555_RS00765 8e6547a3af5e5751ee4138cc348bea38 398 SUPERFAMILY SSF53901 9 274 3.51E-74 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AY555_RS00765 8e6547a3af5e5751ee4138cc348bea38 398 SUPERFAMILY SSF53901 276 396 1.42E-38 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AY555_RS00765 8e6547a3af5e5751ee4138cc348bea38 398 PANTHER PTHR18919 6 398 1.6E-204 T 14-09-2016 AY555_RS00765 8e6547a3af5e5751ee4138cc348bea38 398 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 11 395 4.9E-118 T 14-09-2016 IPR002155 Thiolase GO:0008152|GO:0016747 AY555_RS00765 8e6547a3af5e5751ee4138cc348bea38 398 ProSitePatterns PS00099 Thiolases active site. 378 391 - T 14-09-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AY555_RS00765 8e6547a3af5e5751ee4138cc348bea38 398 Gene3D G3DSA:3.40.47.10 9 128 4.4E-62 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AY555_RS00765 8e6547a3af5e5751ee4138cc348bea38 398 Gene3D G3DSA:3.40.47.10 200 279 4.4E-62 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AY555_RS00765 8e6547a3af5e5751ee4138cc348bea38 398 Pfam PF02803 Thiolase, C-terminal domain 275 395 6.3E-41 T 14-09-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AY555_RS05840 87e46c7633cea3da15ae9a05c6fe7b54 362 TIGRFAM TIGR00492 alr: alanine racemase 16 358 3.8E-60 T 14-09-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AY555_RS05840 87e46c7633cea3da15ae9a05c6fe7b54 362 Gene3D G3DSA:2.40.37.10 217 360 1.8E-39 T 14-09-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 AY555_RS05840 87e46c7633cea3da15ae9a05c6fe7b54 362 SUPERFAMILY SSF51419 17 234 1.62E-52 T 14-09-2016 IPR029066 PLP-binding barrel AY555_RS05840 87e46c7633cea3da15ae9a05c6fe7b54 362 SMART SM01005 234 360 1.4E-39 T 14-09-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AY555_RS05840 87e46c7633cea3da15ae9a05c6fe7b54 362 PANTHER PTHR30511 7 357 6.4E-75 T 14-09-2016 AY555_RS05840 87e46c7633cea3da15ae9a05c6fe7b54 362 SUPERFAMILY SSF50621 228 360 4.19E-35 T 14-09-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 AY555_RS05840 87e46c7633cea3da15ae9a05c6fe7b54 362 Pfam PF00842 Alanine racemase, C-terminal domain 234 358 5.5E-28 T 14-09-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AY555_RS05840 87e46c7633cea3da15ae9a05c6fe7b54 362 Hamap MF_01201 Alanine racemase. 10 360 25.833 T 14-09-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AY555_RS05840 87e46c7633cea3da15ae9a05c6fe7b54 362 PRINTS PR00992 Alanine racemase signature 130 142 9.1E-35 T 14-09-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AY555_RS05840 87e46c7633cea3da15ae9a05c6fe7b54 362 PRINTS PR00992 Alanine racemase signature 342 355 9.1E-35 T 14-09-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AY555_RS05840 87e46c7633cea3da15ae9a05c6fe7b54 362 PRINTS PR00992 Alanine racemase signature 267 282 9.1E-35 T 14-09-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AY555_RS05840 87e46c7633cea3da15ae9a05c6fe7b54 362 PRINTS PR00992 Alanine racemase signature 36 52 9.1E-35 T 14-09-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AY555_RS05840 87e46c7633cea3da15ae9a05c6fe7b54 362 PRINTS PR00992 Alanine racemase signature 288 305 9.1E-35 T 14-09-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AY555_RS05840 87e46c7633cea3da15ae9a05c6fe7b54 362 PRINTS PR00992 Alanine racemase signature 196 223 9.1E-35 T 14-09-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AY555_RS05840 87e46c7633cea3da15ae9a05c6fe7b54 362 Pfam PF01168 Alanine racemase, N-terminal domain 17 223 2.4E-46 T 14-09-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AY555_RS05840 87e46c7633cea3da15ae9a05c6fe7b54 362 PANTHER PTHR30511:SF0 7 357 6.4E-75 T 14-09-2016 AY555_RS05840 87e46c7633cea3da15ae9a05c6fe7b54 362 Gene3D G3DSA:3.20.20.10 20 216 5.1E-49 T 14-09-2016 IPR029066 PLP-binding barrel AY555_RS06805 897b423c5e966acd746f3c0dddd056f5 84 PANTHER PTHR34137 1 76 3.4E-17 T 14-09-2016 AY555_RS06805 897b423c5e966acd746f3c0dddd056f5 84 SUPERFAMILY SSF116842 8 68 5.1E-18 T 14-09-2016 AY555_RS06805 897b423c5e966acd746f3c0dddd056f5 84 Gene3D G3DSA:1.10.287.1040 10 74 2.5E-22 T 14-09-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AY555_RS06805 897b423c5e966acd746f3c0dddd056f5 84 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 14 74 14.533 T 14-09-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AY555_RS06805 897b423c5e966acd746f3c0dddd056f5 84 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 14 67 2.8E-21 T 14-09-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AY555_RS06805 897b423c5e966acd746f3c0dddd056f5 84 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 2 55 2.0E-9 T 14-09-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AY555_RS06805 897b423c5e966acd746f3c0dddd056f5 84 Pfam PF02609 Exonuclease VII small subunit 15 66 7.9E-18 T 14-09-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AY555_RS01840 cfd3aab1cb192f13ab15111fceafb223 154 SUPERFAMILY SSF54637 15 150 2.2E-40 T 14-09-2016 IPR029069 HotDog domain AY555_RS01840 cfd3aab1cb192f13ab15111fceafb223 154 PANTHER PTHR13078 16 148 2.4E-40 T 14-09-2016 AY555_RS01840 cfd3aab1cb192f13ab15111fceafb223 154 Gene3D G3DSA:3.10.129.10 15 146 2.9E-45 T 14-09-2016 IPR029069 HotDog domain AY555_RS01840 cfd3aab1cb192f13ab15111fceafb223 154 Pfam PF01575 MaoC like domain 29 124 1.2E-25 T 14-09-2016 IPR002539 MaoC-like domain AY555_RS01840 cfd3aab1cb192f13ab15111fceafb223 154 PRINTS PR01483 Fatty acid synthase signature 34 56 3.0E-6 T 14-09-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 AY555_RS01840 cfd3aab1cb192f13ab15111fceafb223 154 PRINTS PR01483 Fatty acid synthase signature 56 77 3.0E-6 T 14-09-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 AY555_RS03735 04d02af8f82d9bfb87f589e756c8ecdf 154 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 69 148 2.9E-27 T 14-09-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 AY555_RS03735 04d02af8f82d9bfb87f589e756c8ecdf 154 PANTHER PTHR10815:SF5 36 147 1.1E-40 T 14-09-2016 AY555_RS03735 04d02af8f82d9bfb87f589e756c8ecdf 154 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 68 147 5.0E-25 T 14-09-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 AY555_RS03735 04d02af8f82d9bfb87f589e756c8ecdf 154 PANTHER PTHR10815 36 147 1.1E-40 T 14-09-2016 AY555_RS03735 04d02af8f82d9bfb87f589e756c8ecdf 154 SUPERFAMILY SSF53155 3 71 2.12E-11 T 14-09-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 AY555_RS03735 04d02af8f82d9bfb87f589e756c8ecdf 154 Gene3D G3DSA:1.10.10.10 67 149 2.0E-30 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS03735 04d02af8f82d9bfb87f589e756c8ecdf 154 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 116 122 - T 14-09-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 AY555_RS03735 04d02af8f82d9bfb87f589e756c8ecdf 154 SUPERFAMILY SSF46767 67 148 4.97E-25 T 14-09-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 AY555_RS04400 1eafa7361d59982faa0237b5e6746b3c 372 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 2 120 8.8E-33 T 14-09-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AY555_RS04400 1eafa7361d59982faa0237b5e6746b3c 372 Gene3D G3DSA:3.10.150.10 126 254 2.6E-34 T 14-09-2016 AY555_RS04400 1eafa7361d59982faa0237b5e6746b3c 372 PANTHER PTHR30478 2 372 4.5E-121 T 14-09-2016 AY555_RS04400 1eafa7361d59982faa0237b5e6746b3c 372 SUPERFAMILY SSF55979 251 372 4.35E-35 T 14-09-2016 AY555_RS04400 1eafa7361d59982faa0237b5e6746b3c 372 PIRSF PIRSF000804 1 372 2.3E-120 T 14-09-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AY555_RS04400 1eafa7361d59982faa0237b5e6746b3c 372 SUPERFAMILY SSF55979 127 250 7.85E-26 T 14-09-2016 AY555_RS04400 1eafa7361d59982faa0237b5e6746b3c 372 Gene3D G3DSA:3.10.150.10 255 372 1.2E-35 T 14-09-2016 AY555_RS04400 1eafa7361d59982faa0237b5e6746b3c 372 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 371 1.1E-92 T 14-09-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AY555_RS04400 1eafa7361d59982faa0237b5e6746b3c 372 SMART SM00480 17 368 2.9E-120 T 14-09-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AY555_RS04400 1eafa7361d59982faa0237b5e6746b3c 372 Gene3D G3DSA:3.10.150.10 2 121 2.3E-30 T 14-09-2016 AY555_RS04400 1eafa7361d59982faa0237b5e6746b3c 372 Pfam PF02767 DNA polymerase III beta subunit, central domain 131 249 7.3E-31 T 14-09-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AY555_RS04400 1eafa7361d59982faa0237b5e6746b3c 372 SUPERFAMILY SSF55979 2 118 5.76E-27 T 14-09-2016 AY555_RS04400 1eafa7361d59982faa0237b5e6746b3c 372 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 252 371 3.6E-32 T 14-09-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AY555_RS05815 2a5cdca3a93971f01e0de04560123271 494 SUPERFAMILY SSF53271 257 477 3.15E-72 T 14-09-2016 IPR029057 Phosphoribosyltransferase-like AY555_RS05815 2a5cdca3a93971f01e0de04560123271 494 Gene3D G3DSA:3.60.20.10 23 265 6.6E-64 T 14-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AY555_RS05815 2a5cdca3a93971f01e0de04560123271 494 SUPERFAMILY SSF56235 23 264 9.44E-68 T 14-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AY555_RS05815 2a5cdca3a93971f01e0de04560123271 494 Pfam PF00156 Phosphoribosyl transferase domain 288 393 1.3E-8 T 14-09-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 AY555_RS05815 2a5cdca3a93971f01e0de04560123271 494 PIRSF PIRSF000485 19 482 5.9E-165 T 14-09-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 AY555_RS05815 2a5cdca3a93971f01e0de04560123271 494 Gene3D G3DSA:3.40.50.2020 278 445 8.2E-44 T 14-09-2016 IPR029057 Phosphoribosyltransferase-like AY555_RS05815 2a5cdca3a93971f01e0de04560123271 494 PANTHER PTHR11907 20 482 7.3E-227 T 14-09-2016 AY555_RS05815 2a5cdca3a93971f01e0de04560123271 494 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 22 470 46.541 T 14-09-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 AY555_RS05815 2a5cdca3a93971f01e0de04560123271 494 PANTHER PTHR11907:SF0 20 482 7.3E-227 T 14-09-2016 AY555_RS05815 2a5cdca3a93971f01e0de04560123271 494 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 23 468 8.7E-157 T 14-09-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 AY555_RS05815 2a5cdca3a93971f01e0de04560123271 494 Pfam PF13537 Glutamine amidotransferase domain 101 220 2.4E-22 T 14-09-2016 IPR017932 Glutamine amidotransferase type 2 domain AY555_RS03370 006548863a210cd355166fe94c83a95c 137 PANTHER PTHR37421:SF1 1 137 4.2E-52 T 14-09-2016 AY555_RS03370 006548863a210cd355166fe94c83a95c 137 PANTHER PTHR37421 1 137 4.2E-52 T 14-09-2016 AY555_RS03370 006548863a210cd355166fe94c83a95c 137 PIRSF PIRSF006173 1 136 4.2E-57 T 14-09-2016 IPR008228 Uncharacterised conserved protein UCP006173 AY555_RS03370 006548863a210cd355166fe94c83a95c 137 Pfam PF03692 Putative zinc- or iron-chelating domain 10 83 8.0E-9 T 14-09-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein AY555_RS02080 8d25d2f52548667494adc8de597c4ca3 345 Gene3D G3DSA:3.40.50.720 10 151 1.1E-28 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS02080 8d25d2f52548667494adc8de597c4ca3 345 SUPERFAMILY SSF51735 10 164 1.14E-26 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS02080 8d25d2f52548667494adc8de597c4ca3 345 PANTHER PTHR10174:SF2 87 328 2.0E-29 T 14-09-2016 AY555_RS02080 8d25d2f52548667494adc8de597c4ca3 345 SUPERFAMILY SSF55347 141 325 3.57E-45 T 14-09-2016 AY555_RS02080 8d25d2f52548667494adc8de597c4ca3 345 SMART SM00859 10 126 1.5E-9 T 14-09-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AY555_RS02080 8d25d2f52548667494adc8de597c4ca3 345 Gene3D G3DSA:3.30.360.10 152 322 5.8E-51 T 14-09-2016 AY555_RS02080 8d25d2f52548667494adc8de597c4ca3 345 PANTHER PTHR10174 87 328 2.0E-29 T 14-09-2016 AY555_RS02080 8d25d2f52548667494adc8de597c4ca3 345 PIRSF PIRSF000148 9 341 8.5E-70 T 14-09-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 AY555_RS02080 8d25d2f52548667494adc8de597c4ca3 345 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 146 325 1.4E-29 T 14-09-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AY555_RS02080 8d25d2f52548667494adc8de597c4ca3 345 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 10 124 4.8E-14 T 14-09-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AY555_RS06200 1e8f1226c2e77527cd29c2c501ce3013 425 Gene3D G3DSA:1.10.240.10 248 330 4.2E-34 T 14-09-2016 AY555_RS06200 1e8f1226c2e77527cd29c2c501ce3013 425 SUPERFAMILY SSF55174 329 423 2.22E-16 T 14-09-2016 AY555_RS06200 1e8f1226c2e77527cd29c2c501ce3013 425 Pfam PF01479 S4 domain 362 405 5.4E-7 T 14-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 AY555_RS06200 1e8f1226c2e77527cd29c2c501ce3013 425 SUPERFAMILY SSF52374 11 336 2.17E-90 T 14-09-2016 AY555_RS06200 1e8f1226c2e77527cd29c2c501ce3013 425 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 231 243 1.1E-25 T 14-09-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 AY555_RS06200 1e8f1226c2e77527cd29c2c501ce3013 425 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 172 187 1.1E-25 T 14-09-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 AY555_RS06200 1e8f1226c2e77527cd29c2c501ce3013 425 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 193 215 1.1E-25 T 14-09-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 AY555_RS06200 1e8f1226c2e77527cd29c2c501ce3013 425 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 52 74 1.1E-25 T 14-09-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 AY555_RS06200 1e8f1226c2e77527cd29c2c501ce3013 425 PANTHER PTHR11766 1 423 2.5E-165 T 14-09-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 AY555_RS06200 1e8f1226c2e77527cd29c2c501ce3013 425 Pfam PF00579 tRNA synthetases class I (W and Y) 43 336 1.1E-69 T 14-09-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS06200 1e8f1226c2e77527cd29c2c501ce3013 425 Gene3D G3DSA:3.10.290.10 331 424 2.4E-25 T 14-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 AY555_RS06200 1e8f1226c2e77527cd29c2c501ce3013 425 Gene3D G3DSA:3.40.50.620 6 247 2.8E-92 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS06200 1e8f1226c2e77527cd29c2c501ce3013 425 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 12 422 1.2E-104 T 14-09-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 AY555_RS06200 1e8f1226c2e77527cd29c2c501ce3013 425 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 10 424 41.519 T 14-09-2016 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 AY555_RS10795 de32bc01487837e9847e1e0b493baf93 72 PANTHER PTHR10909:SF305 1 72 2.0E-26 T 14-09-2016 AY555_RS10795 de32bc01487837e9847e1e0b493baf93 72 SUPERFAMILY SSF47203 1 72 1.39E-24 T 14-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AY555_RS10795 de32bc01487837e9847e1e0b493baf93 72 Gene3D G3DSA:1.20.140.10 1 72 5.7E-26 T 14-09-2016 AY555_RS10795 de32bc01487837e9847e1e0b493baf93 72 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 52 71 - T 14-09-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AY555_RS10795 de32bc01487837e9847e1e0b493baf93 72 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 1 72 4.5E-22 T 14-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AY555_RS10795 de32bc01487837e9847e1e0b493baf93 72 PANTHER PTHR10909 1 72 2.0E-26 T 14-09-2016 AY555_RS05900 d400e6f1ed6ca7b7e5a80782173fd4fc 314 Pfam PF01545 Cation efflux family 29 221 1.7E-37 T 14-09-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AY555_RS05900 d400e6f1ed6ca7b7e5a80782173fd4fc 314 PANTHER PTHR11562 16 311 1.6E-89 T 14-09-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AY555_RS05900 d400e6f1ed6ca7b7e5a80782173fd4fc 314 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 27 301 9.7E-65 T 14-09-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AY555_RS05900 d400e6f1ed6ca7b7e5a80782173fd4fc 314 Gene3D G3DSA:3.30.70.1350 222 301 5.1E-24 T 14-09-2016 IPR027470 Cation efflux protein, cytoplasmic domain AY555_RS05900 d400e6f1ed6ca7b7e5a80782173fd4fc 314 PANTHER PTHR11562:SF55 16 311 1.6E-89 T 14-09-2016 AY555_RS05900 d400e6f1ed6ca7b7e5a80782173fd4fc 314 SUPERFAMILY SSF161111 23 222 4.58E-49 T 14-09-2016 AY555_RS05900 d400e6f1ed6ca7b7e5a80782173fd4fc 314 SUPERFAMILY SSF160240 225 301 1.57E-19 T 14-09-2016 AY555_RS05900 d400e6f1ed6ca7b7e5a80782173fd4fc 314 Pfam PF16916 Dimerisation domain of Zinc Transporter 225 301 3.4E-21 T 14-09-2016 IPR027470 Cation efflux protein, cytoplasmic domain AY555_RS05900 d400e6f1ed6ca7b7e5a80782173fd4fc 314 Gene3D G3DSA:1.20.1510.10 27 221 7.4E-42 T 14-09-2016 IPR027469 Cation efflux protein transmembrane domain AY555_RS04625 21ffa641eb5185f99621dd0177c8c911 249 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 21 217 7.8E-25 T 14-09-2016 AY555_RS04100 f3b15d031596dbfff7c41a887761f6de 279 Gene3D G3DSA:3.40.1010.10 1 108 7.7E-12 T 14-09-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 AY555_RS04100 f3b15d031596dbfff7c41a887761f6de 279 SUPERFAMILY SSF53790 1 217 1.83E-74 T 14-09-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 AY555_RS04100 f3b15d031596dbfff7c41a887761f6de 279 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 199 1.8E-28 T 14-09-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 AY555_RS04100 f3b15d031596dbfff7c41a887761f6de 279 Gene3D G3DSA:3.30.950.10 109 220 3.7E-37 T 14-09-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 AY555_RS04100 f3b15d031596dbfff7c41a887761f6de 279 PANTHER PTHR21091 1 217 4.0E-74 T 14-09-2016 AY555_RS04100 f3b15d031596dbfff7c41a887761f6de 279 PIRSF PIRSF005917 1 273 2.1E-92 T 14-09-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AY555_RS04100 f3b15d031596dbfff7c41a887761f6de 279 PANTHER PTHR21091:SF18 1 217 4.0E-74 T 14-09-2016 AY555_RS04100 f3b15d031596dbfff7c41a887761f6de 279 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 78 89 - T 14-09-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AY555_RS04100 f3b15d031596dbfff7c41a887761f6de 279 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 1 219 33.75 T 14-09-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AY555_RS04100 f3b15d031596dbfff7c41a887761f6de 279 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 1 268 4.1E-70 T 14-09-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AY555_RS08085 baad51392abbfa12f14a944b83ac969d 476 SMART SM00861 153 328 8.9E-60 T 14-09-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AY555_RS08085 baad51392abbfa12f14a944b83ac969d 476 PANTHER PTHR11624:SF56 154 476 6.7E-179 T 14-09-2016 IPR027110 Pyruvate dehydrogenase E1 component subunit beta GO:0004739|GO:0006086 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AY555_RS08085 baad51392abbfa12f14a944b83ac969d 476 Gene3D G3DSA:3.40.50.970 154 343 2.1E-97 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AY555_RS08085 baad51392abbfa12f14a944b83ac969d 476 Pfam PF00364 Biotin-requiring enzyme 4 76 3.5E-19 T 14-09-2016 IPR000089 Biotin/lipoyl attachment AY555_RS08085 baad51392abbfa12f14a944b83ac969d 476 Pfam PF02780 Transketolase, C-terminal domain 343 465 1.6E-41 T 14-09-2016 IPR033248 Transketolase, C-terminal domain AY555_RS08085 baad51392abbfa12f14a944b83ac969d 476 Gene3D G3DSA:3.40.50.920 344 473 6.3E-46 T 14-09-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AY555_RS08085 baad51392abbfa12f14a944b83ac969d 476 PANTHER PTHR11624 154 476 6.7E-179 T 14-09-2016 IPR033247 Transketolase family AY555_RS08085 baad51392abbfa12f14a944b83ac969d 476 Pfam PF02779 Transketolase, pyrimidine binding domain 154 327 1.8E-48 T 14-09-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AY555_RS08085 baad51392abbfa12f14a944b83ac969d 476 SUPERFAMILY SSF52922 337 473 1.02E-43 T 14-09-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AY555_RS08085 baad51392abbfa12f14a944b83ac969d 476 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 14-09-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AY555_RS08085 baad51392abbfa12f14a944b83ac969d 476 SUPERFAMILY SSF52518 153 342 1.77E-68 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AY555_RS08085 baad51392abbfa12f14a944b83ac969d 476 Gene3D G3DSA:2.40.50.100 1 92 7.7E-33 T 14-09-2016 AY555_RS08085 baad51392abbfa12f14a944b83ac969d 476 SUPERFAMILY SSF51230 1 92 3.14E-27 T 14-09-2016 IPR011053 Single hybrid motif AY555_RS00655 7c91ec58ddbd3200f096fa9367c91ef2 108 PANTHER PTHR33473 7 108 2.7E-36 T 14-09-2016 AY555_RS00655 7c91ec58ddbd3200f096fa9367c91ef2 108 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 26 104 4.9E-36 T 14-09-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 AY555_RS00655 7c91ec58ddbd3200f096fa9367c91ef2 108 Gene3D G3DSA:3.30.1390.10 9 108 7.4E-44 T 14-09-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AY555_RS00655 7c91ec58ddbd3200f096fa9367c91ef2 108 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 8 103 29.048 T 14-09-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS AY555_RS00655 7c91ec58ddbd3200f096fa9367c91ef2 108 SUPERFAMILY SSF54736 23 107 5.23E-33 T 14-09-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AY555_RS08040 0bdb73bd554b79793e188ccfa40b5090 160 SUPERFAMILY SSF50475 4 156 8.34E-44 T 14-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AY555_RS08040 0bdb73bd554b79793e188ccfa40b5090 160 Gene3D G3DSA:2.30.110.10 3 154 2.2E-50 T 14-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AY555_RS08040 0bdb73bd554b79793e188ccfa40b5090 160 Pfam PF01613 Flavin reductase like domain 13 156 2.4E-37 T 14-09-2016 IPR002563 Flavin reductase like domain GO:0010181 AY555_RS08040 0bdb73bd554b79793e188ccfa40b5090 160 PANTHER PTHR30466:SF1 3 160 1.3E-38 T 14-09-2016 AY555_RS08040 0bdb73bd554b79793e188ccfa40b5090 160 PANTHER PTHR30466 3 160 1.3E-38 T 14-09-2016 AY555_RS08040 0bdb73bd554b79793e188ccfa40b5090 160 SMART SM00903 12 155 4.6E-56 T 14-09-2016 IPR002563 Flavin reductase like domain GO:0010181 AY555_RS01390 de51d6992290b4a00e7550b1cb9fd6da 406 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 92 106 - T 14-09-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AY555_RS01390 de51d6992290b4a00e7550b1cb9fd6da 406 PIRSF PIRSF001413 13 406 5.2E-164 T 14-09-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AY555_RS01390 de51d6992290b4a00e7550b1cb9fd6da 406 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 18 401 9.1E-193 T 14-09-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AY555_RS01390 de51d6992290b4a00e7550b1cb9fd6da 406 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 64 389 2.3E-54 T 14-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AY555_RS01390 de51d6992290b4a00e7550b1cb9fd6da 406 Gene3D G3DSA:3.40.50.1100 110 188 3.2E-21 T 14-09-2016 AY555_RS01390 de51d6992290b4a00e7550b1cb9fd6da 406 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 13 402 53.008 T 14-09-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AY555_RS01390 de51d6992290b4a00e7550b1cb9fd6da 406 SUPERFAMILY SSF53686 15 399 2.62E-150 T 14-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AY555_RS01390 de51d6992290b4a00e7550b1cb9fd6da 406 PANTHER PTHR10314 18 402 3.5E-236 T 14-09-2016 AY555_RS01390 de51d6992290b4a00e7550b1cb9fd6da 406 Gene3D G3DSA:3.40.50.1100 189 403 5.0E-98 T 14-09-2016 AY555_RS01390 de51d6992290b4a00e7550b1cb9fd6da 406 PANTHER PTHR10314:SF3 18 402 3.5E-236 T 14-09-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AY555_RS06765 35faedaecdb7a7e81c3f51cda259c76b 607 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 5 585 4.2E-184 T 14-09-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 AY555_RS06765 35faedaecdb7a7e81c3f51cda259c76b 607 SUPERFAMILY SSF55261 296 421 2.62E-32 T 14-09-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 AY555_RS06765 35faedaecdb7a7e81c3f51cda259c76b 607 Pfam PF01336 OB-fold nucleic acid binding domain 21 102 1.1E-14 T 14-09-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AY555_RS06765 35faedaecdb7a7e81c3f51cda259c76b 607 PANTHER PTHR22594 372 574 1.1E-204 T 14-09-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS06765 35faedaecdb7a7e81c3f51cda259c76b 607 PANTHER PTHR22594 2 304 1.1E-204 T 14-09-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS06765 35faedaecdb7a7e81c3f51cda259c76b 607 Pfam PF02938 GAD domain 316 402 7.6E-14 T 14-09-2016 IPR029351 GAD domain AY555_RS06765 35faedaecdb7a7e81c3f51cda259c76b 607 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 4 566 33.149 T 14-09-2016 AY555_RS06765 35faedaecdb7a7e81c3f51cda259c76b 607 SUPERFAMILY SSF50249 4 107 6.29E-32 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS06765 35faedaecdb7a7e81c3f51cda259c76b 607 PRINTS PR01042 Aspartyl-tRNA synthetase signature 477 493 1.5E-21 T 14-09-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS06765 35faedaecdb7a7e81c3f51cda259c76b 607 PRINTS PR01042 Aspartyl-tRNA synthetase signature 211 224 1.5E-21 T 14-09-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS06765 35faedaecdb7a7e81c3f51cda259c76b 607 PRINTS PR01042 Aspartyl-tRNA synthetase signature 521 535 1.5E-21 T 14-09-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS06765 35faedaecdb7a7e81c3f51cda259c76b 607 PRINTS PR01042 Aspartyl-tRNA synthetase signature 194 206 1.5E-21 T 14-09-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS06765 35faedaecdb7a7e81c3f51cda259c76b 607 SUPERFAMILY SSF55681 116 299 7.96E-94 T 14-09-2016 AY555_RS06765 35faedaecdb7a7e81c3f51cda259c76b 607 SUPERFAMILY SSF55681 427 586 7.96E-94 T 14-09-2016 AY555_RS06765 35faedaecdb7a7e81c3f51cda259c76b 607 Gene3D G3DSA:2.40.50.140 4 108 3.0E-37 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS06765 35faedaecdb7a7e81c3f51cda259c76b 607 Pfam PF00152 tRNA synthetases class II (D, K and N) 122 560 1.9E-89 T 14-09-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS06765 35faedaecdb7a7e81c3f51cda259c76b 607 Gene3D G3DSA:3.30.1360.30 284 415 1.5E-40 T 14-09-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 AY555_RS06765 35faedaecdb7a7e81c3f51cda259c76b 607 PANTHER PTHR22594:SF5 372 574 1.1E-204 T 14-09-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 AY555_RS06765 35faedaecdb7a7e81c3f51cda259c76b 607 PANTHER PTHR22594:SF5 2 304 1.1E-204 T 14-09-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 AY555_RS06765 35faedaecdb7a7e81c3f51cda259c76b 607 Gene3D G3DSA:3.30.930.10 416 587 3.5E-95 T 14-09-2016 AY555_RS06765 35faedaecdb7a7e81c3f51cda259c76b 607 Gene3D G3DSA:3.30.930.10 136 283 3.5E-95 T 14-09-2016 AY555_RS02360 e3d2f22c7c6a98028b849aeced57acb8 103 PANTHER PTHR41277:SF1 25 103 1.0E-11 T 14-09-2016 AY555_RS02360 e3d2f22c7c6a98028b849aeced57acb8 103 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 30 97 4.5E-20 T 14-09-2016 IPR001543 Surface presentation of antigen (SpoA) AY555_RS02360 e3d2f22c7c6a98028b849aeced57acb8 103 SUPERFAMILY SSF101801 27 98 1.11E-17 T 14-09-2016 IPR001543 Surface presentation of antigen (SpoA) AY555_RS02360 e3d2f22c7c6a98028b849aeced57acb8 103 PRINTS PR00956 Flagellar motor switch protein FliN signature 59 72 3.8E-17 T 14-09-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AY555_RS02360 e3d2f22c7c6a98028b849aeced57acb8 103 PRINTS PR00956 Flagellar motor switch protein FliN signature 43 59 3.8E-17 T 14-09-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AY555_RS02360 e3d2f22c7c6a98028b849aeced57acb8 103 PRINTS PR00956 Flagellar motor switch protein FliN signature 72 87 3.8E-17 T 14-09-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AY555_RS02360 e3d2f22c7c6a98028b849aeced57acb8 103 PRINTS PR00956 Flagellar motor switch protein FliN signature 26 42 3.8E-17 T 14-09-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AY555_RS02360 e3d2f22c7c6a98028b849aeced57acb8 103 Gene3D G3DSA:2.30.330.10 29 98 1.3E-22 T 14-09-2016 AY555_RS02360 e3d2f22c7c6a98028b849aeced57acb8 103 PANTHER PTHR41277 25 103 1.0E-11 T 14-09-2016 AY555_RS09835 b3b4ab783e9df4c33460afa978af5ddc 315 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 208 248 4.7E-8 T 14-09-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 AY555_RS09835 b3b4ab783e9df4c33460afa978af5ddc 315 SUPERFAMILY SSF53756 3 303 1.05E-34 T 14-09-2016 AY555_RS09835 b3b4ab783e9df4c33460afa978af5ddc 315 Gene3D G3DSA:3.40.50.2000 206 302 1.6E-20 T 14-09-2016 AY555_RS09835 b3b4ab783e9df4c33460afa978af5ddc 315 Gene3D G3DSA:3.40.50.2000 2 144 1.8E-11 T 14-09-2016 AY555_RS09800 57348bdf7d79625415945c007d50a841 410 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 119 130 - T 14-09-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AY555_RS09800 57348bdf7d79625415945c007d50a841 410 SUPERFAMILY SSF69864 175 401 1.22E-79 T 14-09-2016 AY555_RS09800 57348bdf7d79625415945c007d50a841 410 TIGRFAM TIGR00032 argG: argininosuccinate synthase 7 398 1.5E-136 T 14-09-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AY555_RS09800 57348bdf7d79625415945c007d50a841 410 Hamap MF_00005 Argininosuccinate synthase [argG]. 5 400 47.8 T 14-09-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AY555_RS09800 57348bdf7d79625415945c007d50a841 410 Gene3D G3DSA:3.40.50.620 7 176 1.0E-56 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS09800 57348bdf7d79625415945c007d50a841 410 Pfam PF00764 Arginosuccinate synthase 9 395 9.4E-143 T 14-09-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AY555_RS09800 57348bdf7d79625415945c007d50a841 410 PANTHER PTHR11587 7 405 1.1E-196 T 14-09-2016 AY555_RS09800 57348bdf7d79625415945c007d50a841 410 SUPERFAMILY SSF52402 6 169 8.38E-42 T 14-09-2016 AY555_RS09800 57348bdf7d79625415945c007d50a841 410 Gene3D G3DSA:3.90.1260.10 177 401 1.4E-82 T 14-09-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AY555_RS09800 57348bdf7d79625415945c007d50a841 410 PANTHER PTHR11587:SF2 7 405 1.1E-196 T 14-09-2016 AY555_RS09800 57348bdf7d79625415945c007d50a841 410 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 11 19 - T 14-09-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AY555_RS07810 9858ff65412ca018cd3628bebd87774e 339 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 140 173 7.7E-8 T 14-09-2016 IPR001451 Hexapeptide repeat AY555_RS07810 9858ff65412ca018cd3628bebd87774e 339 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 130 158 - T 14-09-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 AY555_RS07810 9858ff65412ca018cd3628bebd87774e 339 Gene3D G3DSA:2.160.10.10 111 161 1.9E-13 T 14-09-2016 AY555_RS07810 9858ff65412ca018cd3628bebd87774e 339 Gene3D G3DSA:2.160.10.10 162 227 9.9E-16 T 14-09-2016 AY555_RS07810 9858ff65412ca018cd3628bebd87774e 339 PANTHER PTHR22572 110 306 2.4E-50 T 14-09-2016 AY555_RS07810 9858ff65412ca018cd3628bebd87774e 339 PANTHER PTHR22572:SF117 110 306 2.4E-50 T 14-09-2016 AY555_RS07810 9858ff65412ca018cd3628bebd87774e 339 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 6 336 34.879 T 14-09-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 AY555_RS07810 9858ff65412ca018cd3628bebd87774e 339 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 32 101 8.0E-22 T 14-09-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 AY555_RS07810 9858ff65412ca018cd3628bebd87774e 339 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 210 227 0.0029 T 14-09-2016 IPR001451 Hexapeptide repeat AY555_RS07810 9858ff65412ca018cd3628bebd87774e 339 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 111 137 3.8E-4 T 14-09-2016 IPR001451 Hexapeptide repeat AY555_RS07810 9858ff65412ca018cd3628bebd87774e 339 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 233 268 5.5E-8 T 14-09-2016 IPR001451 Hexapeptide repeat AY555_RS07810 9858ff65412ca018cd3628bebd87774e 339 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 18 334 6.2E-105 T 14-09-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 AY555_RS07810 9858ff65412ca018cd3628bebd87774e 339 SUPERFAMILY SSF51161 43 326 3.68E-77 T 14-09-2016 IPR011004 Trimeric LpxA-like AY555_RS07810 9858ff65412ca018cd3628bebd87774e 339 Gene3D G3DSA:2.160.10.10 228 326 3.8E-27 T 14-09-2016 AY555_RS00750 e5c9f034a45ada5ace946637363e2825 202 PANTHER PTHR13887 7 198 2.7E-38 T 14-09-2016 AY555_RS00750 e5c9f034a45ada5ace946637363e2825 202 SUPERFAMILY SSF52833 7 198 2.21E-45 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS00750 e5c9f034a45ada5ace946637363e2825 202 Pfam PF01323 DSBA-like thioredoxin domain 7 197 6.1E-40 T 14-09-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 AY555_RS00750 e5c9f034a45ada5ace946637363e2825 202 Gene3D G3DSA:3.40.30.10 2 198 4.8E-60 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS00750 e5c9f034a45ada5ace946637363e2825 202 PIRSF PIRSF006386 1 202 9.1E-57 T 14-09-2016 IPR014440 HCCA isomerase/glutathione S-transferase kappa AY555_RS02995 21166083fba8f915d47428a4417e006a 196 Pfam PF00881 Nitroreductase family 18 174 2.2E-14 T 14-09-2016 IPR029479 Nitroreductase AY555_RS02995 21166083fba8f915d47428a4417e006a 196 Hamap MF_01204 Probable malonic semialdehyde reductase RutE [rutE]. 2 196 46.809 T 14-09-2016 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE GO:0016491|GO:0055114 AY555_RS02995 21166083fba8f915d47428a4417e006a 196 PANTHER PTHR23026:SF110 10 192 1.3E-84 T 14-09-2016 AY555_RS02995 21166083fba8f915d47428a4417e006a 196 PANTHER PTHR23026 10 192 1.3E-84 T 14-09-2016 AY555_RS02995 21166083fba8f915d47428a4417e006a 196 Gene3D G3DSA:3.40.109.10 5 194 1.7E-41 T 14-09-2016 IPR000415 Nitroreductase-like GO:0016491 AY555_RS02995 21166083fba8f915d47428a4417e006a 196 SUPERFAMILY SSF55469 12 192 3.27E-43 T 14-09-2016 IPR000415 Nitroreductase-like GO:0016491 AY555_RS06935 9f0d2bf026721ba9f535e66e46eb2b64 873 SUPERFAMILY SSF81923 4 155 9.81E-36 T 14-09-2016 IPR004176 Clp, N-terminal GO:0019538 AY555_RS06935 9f0d2bf026721ba9f535e66e46eb2b64 873 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 2.7E-55 T 14-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AY555_RS06935 9f0d2bf026721ba9f535e66e46eb2b64 873 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 6.9E-42 T 14-09-2016 IPR001270 ClpA/B family GO:0005524 AY555_RS06935 9f0d2bf026721ba9f535e66e46eb2b64 873 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 6.9E-42 T 14-09-2016 IPR001270 ClpA/B family GO:0005524 AY555_RS06935 9f0d2bf026721ba9f535e66e46eb2b64 873 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 6.9E-42 T 14-09-2016 IPR001270 ClpA/B family GO:0005524 AY555_RS06935 9f0d2bf026721ba9f535e66e46eb2b64 873 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 6.9E-42 T 14-09-2016 IPR001270 ClpA/B family GO:0005524 AY555_RS06935 9f0d2bf026721ba9f535e66e46eb2b64 873 PANTHER PTHR11638:SF18 1 870 0.0 T 14-09-2016 AY555_RS06935 9f0d2bf026721ba9f535e66e46eb2b64 873 SMART SM01086 766 855 2.4E-38 T 14-09-2016 IPR019489 Clp ATPase, C-terminal AY555_RS06935 9f0d2bf026721ba9f535e66e46eb2b64 873 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 14-09-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 AY555_RS06935 9f0d2bf026721ba9f535e66e46eb2b64 873 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 93 144 5.8E-10 T 14-09-2016 IPR004176 Clp, N-terminal GO:0019538 AY555_RS06935 9f0d2bf026721ba9f535e66e46eb2b64 873 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 67 2.0E-12 T 14-09-2016 IPR004176 Clp, N-terminal GO:0019538 AY555_RS06935 9f0d2bf026721ba9f535e66e46eb2b64 873 PANTHER PTHR11638 1 870 0.0 T 14-09-2016 AY555_RS06935 9f0d2bf026721ba9f535e66e46eb2b64 873 Gene3D G3DSA:1.10.8.60 343 428 1.2E-36 T 14-09-2016 AY555_RS06935 9f0d2bf026721ba9f535e66e46eb2b64 873 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 846 1.3E-27 T 14-09-2016 IPR019489 Clp ATPase, C-terminal AY555_RS06935 9f0d2bf026721ba9f535e66e46eb2b64 873 Gene3D G3DSA:1.10.8.60 777 856 1.6E-32 T 14-09-2016 AY555_RS06935 9f0d2bf026721ba9f535e66e46eb2b64 873 SMART SM00382 198 344 1.9E-8 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS06935 9f0d2bf026721ba9f535e66e46eb2b64 873 SMART SM00382 597 767 5.6E-11 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS06935 9f0d2bf026721ba9f535e66e46eb2b64 873 Gene3D G3DSA:1.10.1780.10 1 147 4.2E-39 T 14-09-2016 IPR004176 Clp, N-terminal GO:0019538 AY555_RS06935 9f0d2bf026721ba9f535e66e46eb2b64 873 Gene3D G3DSA:3.40.50.300 159 341 6.5E-48 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS06935 9f0d2bf026721ba9f535e66e46eb2b64 873 SUPERFAMILY SSF52540 546 853 1.04E-80 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS06935 9f0d2bf026721ba9f535e66e46eb2b64 873 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 14-09-2016 IPR028299 ClpA/B, conserved site 2 AY555_RS06935 9f0d2bf026721ba9f535e66e46eb2b64 873 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 320 4.3E-11 T 14-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AY555_RS06935 9f0d2bf026721ba9f535e66e46eb2b64 873 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 855 0.0 T 14-09-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 AY555_RS06935 9f0d2bf026721ba9f535e66e46eb2b64 873 SUPERFAMILY SSF52540 159 545 1.87E-100 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS06935 9f0d2bf026721ba9f535e66e46eb2b64 873 Gene3D G3DSA:3.40.50.300 550 776 5.2E-53 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS09345 c87e254ca77e1f94a67447f12aa5d9ec 538 Pfam PF08345 Flagellar M-ring protein C-terminal 245 407 5.5E-41 T 14-09-2016 IPR013556 Flagellar M-ring C-terminal AY555_RS09345 c87e254ca77e1f94a67447f12aa5d9ec 538 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 21 536 3.6E-85 T 14-09-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AY555_RS09345 c87e254ca77e1f94a67447f12aa5d9ec 538 PIRSF PIRSF004862 2 538 7.0E-137 T 14-09-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AY555_RS09345 c87e254ca77e1f94a67447f12aa5d9ec 538 PANTHER PTHR30046 1 538 2.3E-127 T 14-09-2016 AY555_RS09345 c87e254ca77e1f94a67447f12aa5d9ec 538 PANTHER PTHR30046:SF0 1 538 2.3E-127 T 14-09-2016 AY555_RS09345 c87e254ca77e1f94a67447f12aa5d9ec 538 Pfam PF01514 Secretory protein of YscJ/FliF family 24 212 9.6E-63 T 14-09-2016 IPR006182 Secretory protein YscJ/FliF AY555_RS09345 c87e254ca77e1f94a67447f12aa5d9ec 538 PRINTS PR01009 Flagellar M-ring protein signature 146 160 1.0E-35 T 14-09-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AY555_RS09345 c87e254ca77e1f94a67447f12aa5d9ec 538 PRINTS PR01009 Flagellar M-ring protein signature 188 206 1.0E-35 T 14-09-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AY555_RS09345 c87e254ca77e1f94a67447f12aa5d9ec 538 PRINTS PR01009 Flagellar M-ring protein signature 114 132 1.0E-35 T 14-09-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AY555_RS09345 c87e254ca77e1f94a67447f12aa5d9ec 538 PRINTS PR01009 Flagellar M-ring protein signature 258 276 1.0E-35 T 14-09-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AY555_RS09345 c87e254ca77e1f94a67447f12aa5d9ec 538 PRINTS PR01009 Flagellar M-ring protein signature 331 355 1.0E-35 T 14-09-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AY555_RS08515 c37bc35d973bc7f19be2671dbf3273e6 116 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 12 115 5.1E-37 T 14-09-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 AY555_RS08515 c37bc35d973bc7f19be2671dbf3273e6 116 SUPERFAMILY SSF89360 8 102 9.42E-29 T 14-09-2016 IPR000361 FeS cluster biogenesis AY555_RS08515 c37bc35d973bc7f19be2671dbf3273e6 116 Gene3D G3DSA:2.60.300.12 8 102 1.1E-32 T 14-09-2016 IPR000361 FeS cluster biogenesis AY555_RS08515 c37bc35d973bc7f19be2671dbf3273e6 116 PANTHER PTHR10072 11 115 4.1E-48 T 14-09-2016 AY555_RS08515 c37bc35d973bc7f19be2671dbf3273e6 116 Pfam PF01521 Iron-sulphur cluster biosynthesis 11 111 2.8E-18 T 14-09-2016 IPR000361 FeS cluster biogenesis AY555_RS08515 c37bc35d973bc7f19be2671dbf3273e6 116 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 97 114 - T 14-09-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site AY555_RS05770 5f8ab5a4bb3924da22be010c64112be7 240 Gene3D G3DSA:3.40.190.10 30 99 5.0E-13 T 14-09-2016 AY555_RS05770 5f8ab5a4bb3924da22be010c64112be7 240 Gene3D G3DSA:3.40.190.10 199 235 5.0E-13 T 14-09-2016 AY555_RS05770 5f8ab5a4bb3924da22be010c64112be7 240 SMART SM00062 22 240 0.0047 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AY555_RS05770 5f8ab5a4bb3924da22be010c64112be7 240 SUPERFAMILY SSF53850 22 236 7.97E-33 T 14-09-2016 AY555_RS05770 5f8ab5a4bb3924da22be010c64112be7 240 PANTHER PTHR38834:SF1 6 237 3.3E-51 T 14-09-2016 AY555_RS05770 5f8ab5a4bb3924da22be010c64112be7 240 PANTHER PTHR38834 6 237 3.3E-51 T 14-09-2016 AY555_RS05770 5f8ab5a4bb3924da22be010c64112be7 240 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 235 4.9E-20 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AY555_RS05770 5f8ab5a4bb3924da22be010c64112be7 240 Gene3D G3DSA:3.40.190.10 100 195 2.9E-8 T 14-09-2016 AY555_RS01015 6b0839cae6aef1c5dc9f9f8463f436f5 231 Gene3D G3DSA:3.30.190.20 17 68 1.3E-47 T 14-09-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 AY555_RS01015 6b0839cae6aef1c5dc9f9f8463f436f5 231 Gene3D G3DSA:3.30.190.20 161 226 1.3E-47 T 14-09-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 AY555_RS01015 6b0839cae6aef1c5dc9f9f8463f436f5 231 PANTHER PTHR23105 20 229 1.3E-88 T 14-09-2016 AY555_RS01015 6b0839cae6aef1c5dc9f9f8463f436f5 231 PANTHER PTHR23105:SF51 20 229 1.3E-88 T 14-09-2016 AY555_RS01015 6b0839cae6aef1c5dc9f9f8463f436f5 231 Gene3D G3DSA:3.40.50.790 69 159 4.9E-40 T 14-09-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich AY555_RS01015 6b0839cae6aef1c5dc9f9f8463f436f5 231 SUPERFAMILY SSF56808 6 225 3.66E-82 T 14-09-2016 IPR023674 Ribosomal protein L1-like AY555_RS01015 6b0839cae6aef1c5dc9f9f8463f436f5 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.183 T 14-09-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AY555_RS01015 6b0839cae6aef1c5dc9f9f8463f436f5 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 7.7E-101 T 14-09-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AY555_RS01015 6b0839cae6aef1c5dc9f9f8463f436f5 231 PIRSF PIRSF002155 1 227 1.6E-78 T 14-09-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 AY555_RS01015 6b0839cae6aef1c5dc9f9f8463f436f5 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 120 139 - T 14-09-2016 IPR023673 Ribosomal protein L1, conserved site AY555_RS01015 6b0839cae6aef1c5dc9f9f8463f436f5 231 Pfam PF00687 Ribosomal protein L1p/L10e family 35 220 4.0E-52 T 14-09-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein AY555_RS03210 bede896232dd9c686302173bdb5b3594 814 Pfam PF00924 Mechanosensitive ion channel 598 793 2.0E-52 T 14-09-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AY555_RS03210 bede896232dd9c686302173bdb5b3594 814 Pfam PF12607 Protein of unknown function (DUF3772) 150 206 1.8E-8 T 14-09-2016 IPR022249 Domain of unknown function DUF3772 AY555_RS03210 bede896232dd9c686302173bdb5b3594 814 PANTHER PTHR30347:SF3 229 813 2.2E-87 T 14-09-2016 AY555_RS03210 bede896232dd9c686302173bdb5b3594 814 SUPERFAMILY SSF50182 637 701 2.71E-17 T 14-09-2016 IPR010920 LSM domain AY555_RS03210 bede896232dd9c686302173bdb5b3594 814 SUPERFAMILY SSF82861 550 635 2.22E-12 T 14-09-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AY555_RS03210 bede896232dd9c686302173bdb5b3594 814 Gene3D G3DSA:2.30.30.60 652 701 3.1E-17 T 14-09-2016 AY555_RS03210 bede896232dd9c686302173bdb5b3594 814 SUPERFAMILY SSF82689 705 803 4.45E-28 T 14-09-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AY555_RS03210 bede896232dd9c686302173bdb5b3594 814 PANTHER PTHR30347 229 813 2.2E-87 T 14-09-2016 AY555_RS03210 bede896232dd9c686302173bdb5b3594 814 Gene3D G3DSA:3.30.70.100 709 791 1.3E-21 T 14-09-2016 AY555_RS02215 30a140fe895000ae67bfae646ab0024f 185 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 9 178 6.6E-34 T 14-09-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein AY555_RS02215 30a140fe895000ae67bfae646ab0024f 185 PANTHER PTHR12589 129 184 3.6E-26 T 14-09-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein AY555_RS02215 30a140fe895000ae67bfae646ab0024f 185 PANTHER PTHR12589 1 91 3.6E-26 T 14-09-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein AY555_RS02215 30a140fe895000ae67bfae646ab0024f 185 SUPERFAMILY SSF55620 115 177 4.34E-30 T 14-09-2016 AY555_RS02215 30a140fe895000ae67bfae646ab0024f 185 SUPERFAMILY SSF55620 7 87 4.34E-30 T 14-09-2016 AY555_RS02215 30a140fe895000ae67bfae646ab0024f 185 Gene3D G3DSA:3.30.479.10 133 178 1.5E-32 T 14-09-2016 AY555_RS02215 30a140fe895000ae67bfae646ab0024f 185 Gene3D G3DSA:3.30.479.10 6 89 1.5E-32 T 14-09-2016 AY555_RS05360 3ad37b07bc447edd1f712b91b0739332 451 SUPERFAMILY SSF63411 258 447 2.33E-31 T 14-09-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AY555_RS05360 3ad37b07bc447edd1f712b91b0739332 451 SUPERFAMILY SSF63411 32 237 5.32E-64 T 14-09-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AY555_RS05360 3ad37b07bc447edd1f712b91b0739332 451 Pfam PF05193 Peptidase M16 inactive domain 198 380 1.2E-25 T 14-09-2016 IPR007863 Peptidase M16, C-terminal AY555_RS05360 3ad37b07bc447edd1f712b91b0739332 451 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 64 87 - T 14-09-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 AY555_RS05360 3ad37b07bc447edd1f712b91b0739332 451 Pfam PF00675 Insulinase (Peptidase family M16) 44 189 1.2E-26 T 14-09-2016 IPR011765 Peptidase M16, N-terminal AY555_RS05360 3ad37b07bc447edd1f712b91b0739332 451 Gene3D G3DSA:3.30.830.10 35 250 5.5E-58 T 14-09-2016 IPR011237 Peptidase M16 domain GO:0046872 AY555_RS05360 3ad37b07bc447edd1f712b91b0739332 451 PANTHER PTHR11851 15 446 1.8E-103 T 14-09-2016 AY555_RS05360 3ad37b07bc447edd1f712b91b0739332 451 Gene3D G3DSA:3.30.830.10 265 445 3.2E-24 T 14-09-2016 IPR011237 Peptidase M16 domain GO:0046872 AY555_RS05360 3ad37b07bc447edd1f712b91b0739332 451 PANTHER PTHR11851:SF136 15 446 1.8E-103 T 14-09-2016 AY555_RS05225 9b3996ea2a3375bd38a4b497b35c4349 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 2 44 1.4E-22 T 14-09-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS05225 9b3996ea2a3375bd38a4b497b35c4349 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 42 3.0E-12 T 14-09-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS05225 9b3996ea2a3375bd38a4b497b35c4349 44 PANTHER PTHR14503 2 44 1.8E-19 T 14-09-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS05225 9b3996ea2a3375bd38a4b497b35c4349 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.481 T 14-09-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS05225 9b3996ea2a3375bd38a4b497b35c4349 44 Pfam PF00468 Ribosomal protein L34 2 44 1.1E-22 T 14-09-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS05225 9b3996ea2a3375bd38a4b497b35c4349 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 14-09-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS07605 a07af1a80bfb352ea9798f364abb71f6 131 PANTHER PTHR13696 34 128 1.2E-20 T 14-09-2016 AY555_RS07605 a07af1a80bfb352ea9798f364abb71f6 131 Pfam PF01883 Domain of unknown function DUF59 35 108 1.7E-19 T 14-09-2016 IPR002744 Domain of unknown function DUF59 AY555_RS07605 a07af1a80bfb352ea9798f364abb71f6 131 PANTHER PTHR13696:SF62 34 128 1.2E-20 T 14-09-2016 AY555_RS07605 a07af1a80bfb352ea9798f364abb71f6 131 SUPERFAMILY SSF117916 34 129 3.92E-31 T 14-09-2016 AY555_RS07605 a07af1a80bfb352ea9798f364abb71f6 131 TIGRFAM TIGR02945 SUF_assoc: FeS assembly SUF system protein 35 131 2.6E-43 T 14-09-2016 IPR014291 SUF system FeS cluster assembly associated AY555_RS09555 6cf40bf003bca2d843a0f5e672f2e0cb 231 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 227 43.876 T 14-09-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AY555_RS09555 6cf40bf003bca2d843a0f5e672f2e0cb 231 PIRSF PIRSF001586 1 231 6.2E-88 T 14-09-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AY555_RS09555 6cf40bf003bca2d843a0f5e672f2e0cb 231 SUPERFAMILY SSF52317 1 227 1.01E-75 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AY555_RS09555 6cf40bf003bca2d843a0f5e672f2e0cb 231 PANTHER PTHR10099 1 229 1.5E-110 T 14-09-2016 AY555_RS09555 6cf40bf003bca2d843a0f5e672f2e0cb 231 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 210 2.1E-42 T 14-09-2016 AY555_RS09555 6cf40bf003bca2d843a0f5e672f2e0cb 231 SMART SM01211 1 229 1.9E-127 T 14-09-2016 AY555_RS09555 6cf40bf003bca2d843a0f5e672f2e0cb 231 Gene3D G3DSA:3.40.50.880 1 228 6.6E-36 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AY555_RS09555 6cf40bf003bca2d843a0f5e672f2e0cb 231 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 228 2.6E-94 T 14-09-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AY555_RS07320 8152ff90a1509e9d5fccd4b89dd71c0d 538 PRINTS PR01165 Cytochrome c oxidase subunit I signature 72 95 5.2E-147 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AY555_RS07320 8152ff90a1509e9d5fccd4b89dd71c0d 538 PRINTS PR01165 Cytochrome c oxidase subunit I signature 203 222 5.2E-147 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AY555_RS07320 8152ff90a1509e9d5fccd4b89dd71c0d 538 PRINTS PR01165 Cytochrome c oxidase subunit I signature 142 154 5.2E-147 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AY555_RS07320 8152ff90a1509e9d5fccd4b89dd71c0d 538 PRINTS PR01165 Cytochrome c oxidase subunit I signature 437 458 5.2E-147 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AY555_RS07320 8152ff90a1509e9d5fccd4b89dd71c0d 538 PRINTS PR01165 Cytochrome c oxidase subunit I signature 359 377 5.2E-147 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AY555_RS07320 8152ff90a1509e9d5fccd4b89dd71c0d 538 PRINTS PR01165 Cytochrome c oxidase subunit I signature 100 124 5.2E-147 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AY555_RS07320 8152ff90a1509e9d5fccd4b89dd71c0d 538 PRINTS PR01165 Cytochrome c oxidase subunit I signature 254 275 5.2E-147 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AY555_RS07320 8152ff90a1509e9d5fccd4b89dd71c0d 538 PRINTS PR01165 Cytochrome c oxidase subunit I signature 300 315 5.2E-147 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AY555_RS07320 8152ff90a1509e9d5fccd4b89dd71c0d 538 PRINTS PR01165 Cytochrome c oxidase subunit I signature 387 406 5.2E-147 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AY555_RS07320 8152ff90a1509e9d5fccd4b89dd71c0d 538 PRINTS PR01165 Cytochrome c oxidase subunit I signature 23 48 5.2E-147 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AY555_RS07320 8152ff90a1509e9d5fccd4b89dd71c0d 538 PRINTS PR01165 Cytochrome c oxidase subunit I signature 174 192 5.2E-147 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AY555_RS07320 8152ff90a1509e9d5fccd4b89dd71c0d 538 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 345 5.2E-147 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AY555_RS07320 8152ff90a1509e9d5fccd4b89dd71c0d 538 Gene3D G3DSA:1.20.210.10 35 498 6.0E-234 T 14-09-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AY555_RS07320 8152ff90a1509e9d5fccd4b89dd71c0d 538 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 24 531 7.8E-219 T 14-09-2016 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AY555_RS07320 8152ff90a1509e9d5fccd4b89dd71c0d 538 PANTHER PTHR10422:SF18 22 532 0.0 T 14-09-2016 AY555_RS07320 8152ff90a1509e9d5fccd4b89dd71c0d 538 SUPERFAMILY SSF81442 20 532 4.32E-220 T 14-09-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AY555_RS07320 8152ff90a1509e9d5fccd4b89dd71c0d 538 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 32 479 1.7E-155 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AY555_RS07320 8152ff90a1509e9d5fccd4b89dd71c0d 538 PANTHER PTHR10422 22 532 0.0 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AY555_RS07320 8152ff90a1509e9d5fccd4b89dd71c0d 538 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 256 310 - T 14-09-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AY555_RS07380 3d0c29e0b9c636aa6276110c5657f0c2 360 Gene3D G3DSA:3.40.50.2300 136 292 6.3E-36 T 14-09-2016 AY555_RS07380 3d0c29e0b9c636aa6276110c5657f0c2 360 Pfam PF02608 Basic membrane protein 31 290 1.6E-40 T 14-09-2016 IPR003760 Basic membrane lipoprotein GO:0005886 AY555_RS07380 3d0c29e0b9c636aa6276110c5657f0c2 360 PANTHER PTHR34296 27 351 3.9E-100 T 14-09-2016 AY555_RS07380 3d0c29e0b9c636aa6276110c5657f0c2 360 PANTHER PTHR34296:SF1 27 351 3.9E-100 T 14-09-2016 AY555_RS07860 bb4f6a19e3de1f4b8f56d293ae85c57b 174 Pfam PF01327 Polypeptide deformylase 4 156 3.8E-47 T 14-09-2016 IPR023635 Peptide deformylase AY555_RS07860 bb4f6a19e3de1f4b8f56d293ae85c57b 174 Gene3D G3DSA:3.90.45.10 5 169 5.7E-54 T 14-09-2016 IPR023635 Peptide deformylase AY555_RS07860 bb4f6a19e3de1f4b8f56d293ae85c57b 174 SUPERFAMILY SSF56420 1 168 2.75E-53 T 14-09-2016 IPR023635 Peptide deformylase AY555_RS07860 bb4f6a19e3de1f4b8f56d293ae85c57b 174 PANTHER PTHR10458 1 171 8.3E-58 T 14-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AY555_RS07860 bb4f6a19e3de1f4b8f56d293ae85c57b 174 PRINTS PR01576 Peptide deformylase signature 127 156 1.2E-28 T 14-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AY555_RS07860 bb4f6a19e3de1f4b8f56d293ae85c57b 174 PRINTS PR01576 Peptide deformylase signature 96 107 1.2E-28 T 14-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AY555_RS07860 bb4f6a19e3de1f4b8f56d293ae85c57b 174 PRINTS PR01576 Peptide deformylase signature 108 126 1.2E-28 T 14-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AY555_RS07860 bb4f6a19e3de1f4b8f56d293ae85c57b 174 PRINTS PR01576 Peptide deformylase signature 34 63 1.2E-28 T 14-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AY555_RS07860 bb4f6a19e3de1f4b8f56d293ae85c57b 174 PIRSF PIRSF004749 1 174 4.3E-52 T 14-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AY555_RS07860 bb4f6a19e3de1f4b8f56d293ae85c57b 174 Hamap MF_00163 Peptide deformylase [def]. 2 169 26.428 T 14-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AY555_RS07860 bb4f6a19e3de1f4b8f56d293ae85c57b 174 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 164 1.0E-34 T 14-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AY555_RS02655 d4a7dac67749409c4f796a83f9298fea 450 PIRSF PIRSF000505 9 447 1.6E-122 T 14-09-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 AY555_RS02655 d4a7dac67749409c4f796a83f9298fea 450 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 15 435 5.3E-108 T 14-09-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 AY555_RS02655 d4a7dac67749409c4f796a83f9298fea 450 SUPERFAMILY SSF55205 14 443 1.05E-124 T 14-09-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AY555_RS02655 d4a7dac67749409c4f796a83f9298fea 450 Gene3D G3DSA:3.65.10.10 243 442 1.8E-46 T 14-09-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 AY555_RS02655 d4a7dac67749409c4f796a83f9298fea 450 PANTHER PTHR21090 14 450 3.6E-158 T 14-09-2016 AY555_RS02655 d4a7dac67749409c4f796a83f9298fea 450 ProSitePatterns PS00885 EPSP synthase signature 2. 352 370 - T 14-09-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 AY555_RS02655 d4a7dac67749409c4f796a83f9298fea 450 ProSitePatterns PS00104 EPSP synthase signature 1. 96 110 - T 14-09-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 AY555_RS02655 d4a7dac67749409c4f796a83f9298fea 450 Gene3D G3DSA:3.65.10.10 29 242 2.5E-57 T 14-09-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 AY555_RS02655 d4a7dac67749409c4f796a83f9298fea 450 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 21 442 1.4E-121 T 14-09-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 AY555_RS02655 d4a7dac67749409c4f796a83f9298fea 450 PANTHER PTHR21090:SF5 14 450 3.6E-158 T 14-09-2016 AY555_RS02655 d4a7dac67749409c4f796a83f9298fea 450 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 17 443 31.28 T 14-09-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 AY555_RS03825 5e07d069ad67ead0b2e8cc38e1e1b06b 200 PIRSF PIRSF006305 1 198 6.0E-35 T 14-09-2016 IPR003697 Maf-like protein GO:0005737 AY555_RS03825 5e07d069ad67ead0b2e8cc38e1e1b06b 200 Pfam PF02545 Maf-like protein 6 194 3.0E-35 T 14-09-2016 IPR003697 Maf-like protein GO:0005737 AY555_RS03825 5e07d069ad67ead0b2e8cc38e1e1b06b 200 Gene3D G3DSA:3.90.950.10 5 197 1.2E-42 T 14-09-2016 IPR029001 Inosine triphosphate pyrophosphatase-like AY555_RS03825 5e07d069ad67ead0b2e8cc38e1e1b06b 200 PANTHER PTHR11746 132 197 4.4E-12 T 14-09-2016 AY555_RS03825 5e07d069ad67ead0b2e8cc38e1e1b06b 200 SUPERFAMILY SSF52972 5 194 1.05E-44 T 14-09-2016 IPR029001 Inosine triphosphate pyrophosphatase-like AY555_RS03825 5e07d069ad67ead0b2e8cc38e1e1b06b 200 Hamap MF_00528 Septum formation protein Maf [maf]. 5 199 23.688 T 14-09-2016 IPR003697 Maf-like protein GO:0005737 AY555_RS03825 5e07d069ad67ead0b2e8cc38e1e1b06b 200 PANTHER PTHR11746:SF102 132 197 4.4E-12 T 14-09-2016 AY555_RS00645 cfe96e3e46927fda1d5aab7c491983ac 389 SUPERFAMILY SSF56935 29 389 9.16E-29 T 14-09-2016 AY555_RS00645 cfe96e3e46927fda1d5aab7c491983ac 389 Pfam PF13609 Gram-negative porin 10 365 5.6E-37 T 14-09-2016 AY555_RS00645 cfe96e3e46927fda1d5aab7c491983ac 389 Gene3D G3DSA:2.40.160.10 38 389 4.9E-33 T 14-09-2016 IPR023614 Porin domain AY555_RS06760 406a9652a67c2a25d780a037927b7e79 157 Pfam PF00578 AhpC/TSA family 6 133 3.9E-34 T 14-09-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 AY555_RS06760 406a9652a67c2a25d780a037927b7e79 157 SUPERFAMILY SSF52833 3 155 1.29E-49 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS06760 406a9652a67c2a25d780a037927b7e79 157 PIRSF PIRSF000239 1 156 8.9E-23 T 14-09-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 AY555_RS06760 406a9652a67c2a25d780a037927b7e79 157 PANTHER PTHR10681 6 152 4.6E-43 T 14-09-2016 AY555_RS06760 406a9652a67c2a25d780a037927b7e79 157 Gene3D G3DSA:3.40.30.10 4 155 1.0E-47 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS03010 ccf9af11135eb719a9e4cc1cc7d32841 179 Gene3D G3DSA:1.25.40.10 104 164 2.9E-9 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS03010 ccf9af11135eb719a9e4cc1cc7d32841 179 SUPERFAMILY SSF81901 104 165 8.89E-9 T 14-09-2016 AY555_RS03010 ccf9af11135eb719a9e4cc1cc7d32841 179 SMART SM00671 117 152 5.7E-6 T 14-09-2016 IPR006597 Sel1-like repeat AY555_RS05080 7db9c086f08c50dc75ae45bc6571c033 292 PIRSF PIRSF036480 10 292 2.8E-108 T 14-09-2016 AY555_RS05080 7db9c086f08c50dc75ae45bc6571c033 292 SUPERFAMILY SSF53328 97 292 1.7E-61 T 14-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AY555_RS05080 7db9c086f08c50dc75ae45bc6571c033 292 SUPERFAMILY SSF55021 9 96 3.46E-13 T 14-09-2016 AY555_RS05080 7db9c086f08c50dc75ae45bc6571c033 292 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 13 291 3.4E-100 T 14-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 AY555_RS05080 7db9c086f08c50dc75ae45bc6571c033 292 Pfam PF00551 Formyl transferase 97 273 1.4E-34 T 14-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AY555_RS05080 7db9c086f08c50dc75ae45bc6571c033 292 PANTHER PTHR10520:SF7 7 285 6.3E-143 T 14-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 AY555_RS05080 7db9c086f08c50dc75ae45bc6571c033 292 Gene3D G3DSA:3.30.70.260 11 90 1.0E-19 T 14-09-2016 AY555_RS05080 7db9c086f08c50dc75ae45bc6571c033 292 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 119 146 3.3E-53 T 14-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 AY555_RS05080 7db9c086f08c50dc75ae45bc6571c033 292 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 14 40 3.3E-53 T 14-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 AY555_RS05080 7db9c086f08c50dc75ae45bc6571c033 292 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 243 265 3.3E-53 T 14-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 AY555_RS05080 7db9c086f08c50dc75ae45bc6571c033 292 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 97 119 3.3E-53 T 14-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 AY555_RS05080 7db9c086f08c50dc75ae45bc6571c033 292 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 46 58 3.3E-53 T 14-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 AY555_RS05080 7db9c086f08c50dc75ae45bc6571c033 292 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 265 290 3.3E-53 T 14-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 AY555_RS05080 7db9c086f08c50dc75ae45bc6571c033 292 Gene3D G3DSA:3.40.50.170 97 291 1.1E-54 T 14-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AY555_RS05080 7db9c086f08c50dc75ae45bc6571c033 292 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 9 291 46.647 T 14-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 AY555_RS05080 7db9c086f08c50dc75ae45bc6571c033 292 PANTHER PTHR10520 7 285 6.3E-143 T 14-09-2016 AY555_RS06990 2efa515a11fd848997ea872c09d334f0 132 SUPERFAMILY SSF54637 10 131 1.09E-36 T 14-09-2016 IPR029069 HotDog domain AY555_RS06990 2efa515a11fd848997ea872c09d334f0 132 Gene3D G3DSA:3.10.129.10 7 130 6.0E-36 T 14-09-2016 IPR029069 HotDog domain AY555_RS06990 2efa515a11fd848997ea872c09d334f0 132 Pfam PF03061 Thioesterase superfamily 30 98 2.0E-14 T 14-09-2016 IPR006683 Thioesterase domain AY555_RS06990 2efa515a11fd848997ea872c09d334f0 132 PANTHER PTHR11049:SF5 5 129 4.5E-48 T 14-09-2016 AY555_RS06990 2efa515a11fd848997ea872c09d334f0 132 PANTHER PTHR11049 5 129 4.5E-48 T 14-09-2016 AY555_RS01300 5692e48343c23d1a35518db668858db0 624 PANTHER PTHR30540 8 624 1.3E-209 T 14-09-2016 AY555_RS01300 5692e48343c23d1a35518db668858db0 624 PANTHER PTHR30540:SF7 8 624 1.3E-209 T 14-09-2016 AY555_RS01300 5692e48343c23d1a35518db668858db0 624 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 4 624 32.478 T 14-09-2016 IPR023051 Potassium uptake protein, low affinity, Kup AY555_RS01300 5692e48343c23d1a35518db668858db0 624 Pfam PF02705 K+ potassium transporter 13 544 1.2E-198 T 14-09-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 AY555_RS03985 c4c030caad4daf4c1055ece0fb6fb59e 441 Pfam PF00425 chorismate binding enzyme 175 428 1.7E-90 T 14-09-2016 IPR015890 Chorismate-utilising enzyme, C-terminal AY555_RS03985 c4c030caad4daf4c1055ece0fb6fb59e 441 Gene3D G3DSA:3.60.120.10 7 436 3.9E-137 T 14-09-2016 IPR005801 ADC synthase GO:0009058 AY555_RS03985 c4c030caad4daf4c1055ece0fb6fb59e 441 Pfam PF04715 Anthranilate synthase component I, N terminal region 8 133 1.3E-20 T 14-09-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AY555_RS03985 c4c030caad4daf4c1055ece0fb6fb59e 441 SUPERFAMILY SSF56322 5 435 1.44E-128 T 14-09-2016 IPR005801 ADC synthase GO:0009058 AY555_RS03985 c4c030caad4daf4c1055ece0fb6fb59e 441 PANTHER PTHR11236 8 435 3.9E-145 T 14-09-2016 AY555_RS03985 c4c030caad4daf4c1055ece0fb6fb59e 441 PRINTS PR00095 Anthranilate synthase component I signature 369 383 2.9E-16 T 14-09-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AY555_RS03985 c4c030caad4daf4c1055ece0fb6fb59e 441 PRINTS PR00095 Anthranilate synthase component I signature 289 302 2.9E-16 T 14-09-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AY555_RS03985 c4c030caad4daf4c1055ece0fb6fb59e 441 PRINTS PR00095 Anthranilate synthase component I signature 384 398 2.9E-16 T 14-09-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AY555_RS03985 c4c030caad4daf4c1055ece0fb6fb59e 441 PRINTS PR00095 Anthranilate synthase component I signature 275 288 2.9E-16 T 14-09-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AY555_RS05785 dfe9bb22a61750df7ad1d9e0928c1671 243 PANTHER PTHR38834:SF1 1 242 4.1E-44 T 14-09-2016 AY555_RS05785 dfe9bb22a61750df7ad1d9e0928c1671 243 Gene3D G3DSA:3.40.190.10 29 104 4.8E-10 T 14-09-2016 AY555_RS05785 dfe9bb22a61750df7ad1d9e0928c1671 243 Gene3D G3DSA:3.40.190.10 204 240 4.8E-10 T 14-09-2016 AY555_RS05785 dfe9bb22a61750df7ad1d9e0928c1671 243 PANTHER PTHR38834 1 242 4.1E-44 T 14-09-2016 AY555_RS05785 dfe9bb22a61750df7ad1d9e0928c1671 243 SUPERFAMILY SSF53850 28 240 7.03E-30 T 14-09-2016 AY555_RS05785 dfe9bb22a61750df7ad1d9e0928c1671 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 240 5.5E-14 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AY555_RS05785 dfe9bb22a61750df7ad1d9e0928c1671 243 Gene3D G3DSA:3.40.190.10 105 199 1.5E-6 T 14-09-2016 AY555_RS02755 32025f3888e06a9263e13de032e9fbdb 134 SUPERFAMILY SSF50199 15 127 1.44E-23 T 14-09-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AY555_RS02755 32025f3888e06a9263e13de032e9fbdb 134 PANTHER PTHR12302 17 121 2.7E-20 T 14-09-2016 AY555_RS02755 32025f3888e06a9263e13de032e9fbdb 134 PANTHER PTHR12302:SF0 17 121 2.7E-20 T 14-09-2016 AY555_RS02755 32025f3888e06a9263e13de032e9fbdb 134 SMART SM00318 21 131 1.0E-6 T 14-09-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AY555_RS02755 32025f3888e06a9263e13de032e9fbdb 134 Gene3D G3DSA:2.40.50.90 19 118 7.4E-24 T 14-09-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AY555_RS02755 32025f3888e06a9263e13de032e9fbdb 134 Pfam PF00565 Staphylococcal nuclease homologue 46 122 3.4E-10 T 14-09-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AY555_RS00605 ed5d6ab1ed55c84a0c49ce34eec754a1 309 PANTHER PTHR10625 1 309 3.1E-109 T 14-09-2016 IPR000286 Histone deacetylase superfamily AY555_RS00605 ed5d6ab1ed55c84a0c49ce34eec754a1 309 PRINTS PR01270 Histone deacetylase superfamily signature 236 246 1.9E-15 T 14-09-2016 IPR000286 Histone deacetylase superfamily AY555_RS00605 ed5d6ab1ed55c84a0c49ce34eec754a1 309 PRINTS PR01270 Histone deacetylase superfamily signature 121 144 1.9E-15 T 14-09-2016 IPR000286 Histone deacetylase superfamily AY555_RS00605 ed5d6ab1ed55c84a0c49ce34eec754a1 309 PRINTS PR01270 Histone deacetylase superfamily signature 155 170 1.9E-15 T 14-09-2016 IPR000286 Histone deacetylase superfamily AY555_RS00605 ed5d6ab1ed55c84a0c49ce34eec754a1 309 Pfam PF00850 Histone deacetylase domain 20 305 4.5E-86 T 14-09-2016 IPR023801 Histone deacetylase domain AY555_RS00605 ed5d6ab1ed55c84a0c49ce34eec754a1 309 Gene3D G3DSA:3.40.800.20 3 309 8.5E-109 T 14-09-2016 IPR023801 Histone deacetylase domain AY555_RS00605 ed5d6ab1ed55c84a0c49ce34eec754a1 309 SUPERFAMILY SSF52768 1 308 1.2E-107 T 14-09-2016 AY555_RS05395 4cee90a0508e1813302960877f7769fb 705 PANTHER PTHR37947 56 585 7.0E-36 T 14-09-2016 AY555_RS05395 4cee90a0508e1813302960877f7769fb 705 Gene3D G3DSA:3.40.50.880 268 523 4.4E-33 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AY555_RS05395 4cee90a0508e1813302960877f7769fb 705 SUPERFAMILY SSF52317 271 523 5.95E-47 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AY555_RS05395 4cee90a0508e1813302960877f7769fb 705 SUPERFAMILY SSF53300 71 181 1.97E-5 T 14-09-2016 IPR002035 von Willebrand factor, type A AY555_RS07105 3f7856aa1098d93f3c16f4b845cd82ca 137 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 1 102 6.4E-18 T 14-09-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 AY555_RS07105 3f7856aa1098d93f3c16f4b845cd82ca 137 SUPERFAMILY SSF53927 4 129 4.52E-45 T 14-09-2016 IPR016193 Cytidine deaminase-like GO:0003824 AY555_RS07105 3f7856aa1098d93f3c16f4b845cd82ca 137 PANTHER PTHR11644 5 128 7.6E-58 T 14-09-2016 AY555_RS07105 3f7856aa1098d93f3c16f4b845cd82ca 137 Gene3D G3DSA:3.40.140.10 2 129 6.3E-49 T 14-09-2016 AY555_RS07105 3f7856aa1098d93f3c16f4b845cd82ca 137 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 54 96 - T 14-09-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AY555_RS07105 3f7856aa1098d93f3c16f4b845cd82ca 137 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 6 129 1.8E-43 T 14-09-2016 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 AY555_RS01030 a8ada5d2dd53c5ca77551a54caeb6a66 65 PANTHER PTHR33910 8 64 6.0E-15 T 14-09-2016 AY555_RS01030 a8ada5d2dd53c5ca77551a54caeb6a66 65 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 8 60 1.9E-18 T 14-09-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 AY555_RS01030 a8ada5d2dd53c5ca77551a54caeb6a66 65 Gene3D G3DSA:1.20.5.1030 4 61 5.2E-22 T 14-09-2016 AY555_RS01030 a8ada5d2dd53c5ca77551a54caeb6a66 65 Hamap MF_00422 Protein translocase subunit SecE [secE]. 4 59 11.246 T 14-09-2016 IPR022943 Preprotein translocase subunit SecE AY555_RS01030 a8ada5d2dd53c5ca77551a54caeb6a66 65 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 8 62 8.4E-18 T 14-09-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AY555_RS01030 a8ada5d2dd53c5ca77551a54caeb6a66 65 PANTHER PTHR33910:SF1 8 64 6.0E-15 T 14-09-2016 AY555_RS03480 736780a031f08e980240b0e1cb86abc5 159 PRINTS PR00502 NUDIX hydrolase family signature 53 68 1.2E-5 T 14-09-2016 IPR020476 NUDIX hydrolase AY555_RS03480 736780a031f08e980240b0e1cb86abc5 159 PRINTS PR00502 NUDIX hydrolase family signature 39 53 1.2E-5 T 14-09-2016 IPR020476 NUDIX hydrolase AY555_RS03480 736780a031f08e980240b0e1cb86abc5 159 SUPERFAMILY SSF55811 9 157 3.11E-32 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AY555_RS03480 736780a031f08e980240b0e1cb86abc5 159 PANTHER PTHR11839 16 158 6.3E-52 T 14-09-2016 AY555_RS03480 736780a031f08e980240b0e1cb86abc5 159 Pfam PF00293 NUDIX domain 12 149 4.1E-25 T 14-09-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AY555_RS03480 736780a031f08e980240b0e1cb86abc5 159 Gene3D G3DSA:3.90.79.10 7 154 7.5E-32 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AY555_RS03480 736780a031f08e980240b0e1cb86abc5 159 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 5 159 35.104 T 14-09-2016 IPR022927 RNA pyrophosphohydrolase RppH AY555_RS03480 736780a031f08e980240b0e1cb86abc5 159 PANTHER PTHR11839:SF13 16 158 6.3E-52 T 14-09-2016 AY555_RS03480 736780a031f08e980240b0e1cb86abc5 159 ProSitePatterns PS00893 Nudix box signature. 44 65 - T 14-09-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AY555_RS04485 485d031c137d2d3bebd2a4deaea5a7e5 1026 SUPERFAMILY SSF82714 183 265 4.19E-16 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AY555_RS04485 485d031c137d2d3bebd2a4deaea5a7e5 1026 SUPERFAMILY SSF82693 137 182 1.8E-21 T 14-09-2016 AY555_RS04485 485d031c137d2d3bebd2a4deaea5a7e5 1026 SUPERFAMILY SSF82693 268 323 1.8E-21 T 14-09-2016 AY555_RS04485 485d031c137d2d3bebd2a4deaea5a7e5 1026 SUPERFAMILY SSF82866 290 489 4.71E-49 T 14-09-2016 AY555_RS04485 485d031c137d2d3bebd2a4deaea5a7e5 1026 SUPERFAMILY SSF82693 557 652 1.99E-9 T 14-09-2016 AY555_RS04485 485d031c137d2d3bebd2a4deaea5a7e5 1026 Gene3D G3DSA:3.30.2090.10 182 264 9.9E-18 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AY555_RS04485 485d031c137d2d3bebd2a4deaea5a7e5 1026 SUPERFAMILY SSF82866 790 1016 2.35E-43 T 14-09-2016 AY555_RS04485 485d031c137d2d3bebd2a4deaea5a7e5 1026 Gene3D G3DSA:1.10.3850.10 798 1014 9.3E-54 T 14-09-2016 AY555_RS04485 485d031c137d2d3bebd2a4deaea5a7e5 1026 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 7.0E-77 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AY555_RS04485 485d031c137d2d3bebd2a4deaea5a7e5 1026 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 7.0E-77 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AY555_RS04485 485d031c137d2d3bebd2a4deaea5a7e5 1026 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 7.0E-77 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AY555_RS04485 485d031c137d2d3bebd2a4deaea5a7e5 1026 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 7.0E-77 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AY555_RS04485 485d031c137d2d3bebd2a4deaea5a7e5 1026 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 7.0E-77 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AY555_RS04485 485d031c137d2d3bebd2a4deaea5a7e5 1026 PRINTS PR00702 Acriflavin resistance protein family signature 544 561 7.0E-77 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AY555_RS04485 485d031c137d2d3bebd2a4deaea5a7e5 1026 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 7.0E-77 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AY555_RS04485 485d031c137d2d3bebd2a4deaea5a7e5 1026 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 7.0E-77 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AY555_RS04485 485d031c137d2d3bebd2a4deaea5a7e5 1026 PRINTS PR00702 Acriflavin resistance protein family signature 610 624 7.0E-77 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AY555_RS04485 485d031c137d2d3bebd2a4deaea5a7e5 1026 SUPERFAMILY SSF82714 706 791 9.29E-18 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AY555_RS04485 485d031c137d2d3bebd2a4deaea5a7e5 1026 PANTHER PTHR32063:SF21 1 1025 0.0 T 14-09-2016 AY555_RS04485 485d031c137d2d3bebd2a4deaea5a7e5 1026 Gene3D G3DSA:3.30.70.1430 581 650 2.5E-4 T 14-09-2016 AY555_RS04485 485d031c137d2d3bebd2a4deaea5a7e5 1026 Gene3D G3DSA:3.30.2090.10 705 794 5.2E-18 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AY555_RS04485 485d031c137d2d3bebd2a4deaea5a7e5 1026 SUPERFAMILY SSF82693 40 132 9.42E-22 T 14-09-2016 AY555_RS04485 485d031c137d2d3bebd2a4deaea5a7e5 1026 Pfam PF00873 AcrB/AcrD/AcrF family 3 1012 0.0 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AY555_RS04485 485d031c137d2d3bebd2a4deaea5a7e5 1026 Gene3D G3DSA:3.30.70.1430 40 141 1.7E-27 T 14-09-2016 AY555_RS04485 485d031c137d2d3bebd2a4deaea5a7e5 1026 PANTHER PTHR32063 1 1025 0.0 T 14-09-2016 AY555_RS04485 485d031c137d2d3bebd2a4deaea5a7e5 1026 Gene3D G3DSA:1.20.1640.10 285 499 2.3E-59 T 14-09-2016 AY555_RS07510 7b69b892dd07d90536d0b2225a0b2ecc 434 Pfam PF04052 TolB amino-terminal domain 25 131 3.8E-33 T 14-09-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AY555_RS07510 7b69b892dd07d90536d0b2225a0b2ecc 434 Gene3D G3DSA:3.40.50.10070 24 152 8.5E-50 T 14-09-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AY555_RS07510 7b69b892dd07d90536d0b2225a0b2ecc 434 SUPERFAMILY SSF69304 159 431 1.11E-58 T 14-09-2016 AY555_RS07510 7b69b892dd07d90536d0b2225a0b2ecc 434 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 18 430 8.4E-143 T 14-09-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 AY555_RS07510 7b69b892dd07d90536d0b2225a0b2ecc 434 Pfam PF07676 WD40-like Beta Propeller Repeat 328 361 0.0014 T 14-09-2016 IPR011659 WD40-like Beta Propeller AY555_RS07510 7b69b892dd07d90536d0b2225a0b2ecc 434 Pfam PF07676 WD40-like Beta Propeller Repeat 285 319 1.2E-9 T 14-09-2016 IPR011659 WD40-like Beta Propeller AY555_RS07510 7b69b892dd07d90536d0b2225a0b2ecc 434 Pfam PF07676 WD40-like Beta Propeller Repeat 245 274 0.021 T 14-09-2016 IPR011659 WD40-like Beta Propeller AY555_RS07510 7b69b892dd07d90536d0b2225a0b2ecc 434 Pfam PF07676 WD40-like Beta Propeller Repeat 371 406 4.8E-6 T 14-09-2016 IPR011659 WD40-like Beta Propeller AY555_RS07510 7b69b892dd07d90536d0b2225a0b2ecc 434 PANTHER PTHR36842 6 432 1.4E-54 T 14-09-2016 AY555_RS07510 7b69b892dd07d90536d0b2225a0b2ecc 434 Gene3D G3DSA:2.130.10.10 153 431 4.3E-79 T 14-09-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AY555_RS07510 7b69b892dd07d90536d0b2225a0b2ecc 434 Hamap MF_00671 Protein TolB [tolB]. 6 429 32.887 T 14-09-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 AY555_RS07510 7b69b892dd07d90536d0b2225a0b2ecc 434 SUPERFAMILY SSF52964 30 163 3.79E-41 T 14-09-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AY555_RS09665 bd2b5ac0eb7a5274f9cb67e51fe8ded9 323 SUPERFAMILY SSF52540 2 226 5.79E-59 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS09665 bd2b5ac0eb7a5274f9cb67e51fe8ded9 323 PANTHER PTHR24220 3 223 2.0E-78 T 14-09-2016 AY555_RS09665 bd2b5ac0eb7a5274f9cb67e51fe8ded9 323 Gene3D G3DSA:3.40.50.300 1 232 9.1E-66 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS09665 bd2b5ac0eb7a5274f9cb67e51fe8ded9 323 SMART SM00382 32 215 1.2E-11 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS09665 bd2b5ac0eb7a5274f9cb67e51fe8ded9 323 Pfam PF00005 ABC transporter 23 166 3.0E-32 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AY555_RS01165 d94d308753314507ccc31921af7261e4 1173 Pfam PF00809 Pterin binding enzyme 346 579 1.2E-41 T 14-09-2016 IPR000489 Pterin-binding domain GO:0042558 AY555_RS01165 d94d308753314507ccc31921af7261e4 1173 SUPERFAMILY SSF56507 900 1173 2.22E-86 T 14-09-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 AY555_RS01165 d94d308753314507ccc31921af7261e4 1173 SMART SM01018 634 716 3.1E-40 T 14-09-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain AY555_RS01165 d94d308753314507ccc31921af7261e4 1173 Pfam PF02607 B12 binding domain 636 709 3.2E-24 T 14-09-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain AY555_RS01165 d94d308753314507ccc31921af7261e4 1173 Gene3D G3DSA:3.10.196.10 955 1173 6.3E-63 T 14-09-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 AY555_RS01165 d94d308753314507ccc31921af7261e4 1173 PANTHER PTHR21091:SF97 8 380 2.5E-93 T 14-09-2016 AY555_RS01165 d94d308753314507ccc31921af7261e4 1173 Gene3D G3DSA:3.20.20.20 350 606 3.4E-78 T 14-09-2016 IPR000489 Pterin-binding domain GO:0042558 AY555_RS01165 d94d308753314507ccc31921af7261e4 1173 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 959 1173 1.5E-39 T 14-09-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 AY555_RS01165 d94d308753314507ccc31921af7261e4 1173 SUPERFAMILY SSF82282 1 385 2.49E-97 T 14-09-2016 IPR003726 Homocysteine-binding domain AY555_RS01165 d94d308753314507ccc31921af7261e4 1173 Pfam PF02574 Homocysteine S-methyltransferase 13 301 3.4E-62 T 14-09-2016 IPR003726 Homocysteine-binding domain AY555_RS01165 d94d308753314507ccc31921af7261e4 1173 Gene3D G3DSA:3.20.20.330 2 349 1.3E-99 T 14-09-2016 IPR003726 Homocysteine-binding domain AY555_RS01165 d94d308753314507ccc31921af7261e4 1173 PIRSF PIRSF000381 1 1173 0.0 T 14-09-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 AY555_RS01165 d94d308753314507ccc31921af7261e4 1173 Gene3D G3DSA:3.40.50.280 719 860 1.6E-46 T 14-09-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 AY555_RS01165 d94d308753314507ccc31921af7261e4 1173 SUPERFAMILY SSF51717 342 611 6.28E-71 T 14-09-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 AY555_RS01165 d94d308753314507ccc31921af7261e4 1173 Pfam PF02310 B12 binding domain 722 815 1.3E-19 T 14-09-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 AY555_RS01165 d94d308753314507ccc31921af7261e4 1173 SUPERFAMILY SSF52242 717 851 2.62E-37 T 14-09-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 AY555_RS01165 d94d308753314507ccc31921af7261e4 1173 TIGRFAM TIGR02082 metH: methionine synthase 8 1173 0.0 T 14-09-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 AY555_RS01165 d94d308753314507ccc31921af7261e4 1173 Gene3D G3DSA:1.10.1240.10 634 713 2.3E-30 T 14-09-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain AY555_RS01165 d94d308753314507ccc31921af7261e4 1173 PANTHER PTHR21091 8 380 2.5E-93 T 14-09-2016 AY555_RS01165 d94d308753314507ccc31921af7261e4 1173 SUPERFAMILY SSF47644 634 715 1.1E-23 T 14-09-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain AY555_RS03030 90608c77aab74547e360c082eac2af7f 87 Gene3D G3DSA:3.30.1340.10 3 86 9.3E-28 T 14-09-2016 IPR000032 Phosphocarrier HPr protein-like AY555_RS03030 90608c77aab74547e360c082eac2af7f 87 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 3 80 3.4E-25 T 14-09-2016 IPR000032 Phosphocarrier HPr protein-like AY555_RS03030 90608c77aab74547e360c082eac2af7f 87 PANTHER PTHR33705 1 87 5.0E-32 T 14-09-2016 AY555_RS03030 90608c77aab74547e360c082eac2af7f 87 SUPERFAMILY SSF55594 3 87 1.7E-25 T 14-09-2016 IPR000032 Phosphocarrier HPr protein-like AY555_RS03030 90608c77aab74547e360c082eac2af7f 87 PRINTS PR00107 Phosphocarrier protein signature 12 28 2.0E-11 T 14-09-2016 IPR000032 Phosphocarrier HPr protein-like AY555_RS03030 90608c77aab74547e360c082eac2af7f 87 PRINTS PR00107 Phosphocarrier protein signature 52 69 2.0E-11 T 14-09-2016 IPR000032 Phosphocarrier HPr protein-like AY555_RS03030 90608c77aab74547e360c082eac2af7f 87 PRINTS PR00107 Phosphocarrier protein signature 37 52 2.0E-11 T 14-09-2016 IPR000032 Phosphocarrier HPr protein-like AY555_RS03030 90608c77aab74547e360c082eac2af7f 87 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 38 53 - T 14-09-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AY555_RS03030 90608c77aab74547e360c082eac2af7f 87 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 12 19 - T 14-09-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AY555_RS03030 90608c77aab74547e360c082eac2af7f 87 Pfam PF00381 PTS HPr component phosphorylation site 3 81 2.0E-23 T 14-09-2016 IPR000032 Phosphocarrier HPr protein-like AY555_RS03030 90608c77aab74547e360c082eac2af7f 87 PANTHER PTHR33705:SF2 1 87 5.0E-32 T 14-09-2016 AY555_RS02555 e0cb39cb2a833b00c0fbd4938889a619 640 PANTHER PTHR10366 287 587 7.3E-81 T 14-09-2016 AY555_RS02555 e0cb39cb2a833b00c0fbd4938889a619 640 Pfam PF02719 Polysaccharide biosynthesis protein 288 539 3.3E-75 T 14-09-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain AY555_RS02555 e0cb39cb2a833b00c0fbd4938889a619 640 PANTHER PTHR10366:SF256 287 587 7.3E-81 T 14-09-2016 AY555_RS02555 e0cb39cb2a833b00c0fbd4938889a619 640 Gene3D G3DSA:3.40.50.720 287 468 1.8E-37 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS02555 e0cb39cb2a833b00c0fbd4938889a619 640 Pfam PF13727 CoA-binding domain 72 249 7.1E-7 T 14-09-2016 AY555_RS02555 e0cb39cb2a833b00c0fbd4938889a619 640 Gene3D G3DSA:3.90.25.10 469 543 1.4E-4 T 14-09-2016 AY555_RS02555 e0cb39cb2a833b00c0fbd4938889a619 640 SUPERFAMILY SSF51735 158 251 1.61E-10 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS02555 e0cb39cb2a833b00c0fbd4938889a619 640 Gene3D G3DSA:3.40.50.720 156 240 6.6E-11 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS02555 e0cb39cb2a833b00c0fbd4938889a619 640 SUPERFAMILY SSF51735 286 552 1.67E-49 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS07910 ea9fc63bee8a7e191da5f859454b36ad 99 PANTHER PTHR12219 5 95 3.7E-26 T 14-09-2016 IPR006885 NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial GO:0016651|GO:0022900 AY555_RS07910 ea9fc63bee8a7e191da5f859454b36ad 99 Pfam PF04800 ETC complex I subunit conserved region 5 96 6.3E-31 T 14-09-2016 IPR006885 NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial GO:0016651|GO:0022900 AY555_RS07910 ea9fc63bee8a7e191da5f859454b36ad 99 Gene3D G3DSA:3.30.160.190 4 82 4.9E-28 T 14-09-2016 AY555_RS02120 040213bd4200ab8de46fd472cca8d8f0 250 PANTHER PTHR24032 19 239 2.0E-30 T 14-09-2016 AY555_RS02120 040213bd4200ab8de46fd472cca8d8f0 250 Gene3D G3DSA:3.60.21.10 13 244 3.0E-49 T 14-09-2016 IPR029052 Metallo-dependent phosphatase-like AY555_RS02120 040213bd4200ab8de46fd472cca8d8f0 250 Pfam PF00149 Calcineurin-like phosphoesterase 19 213 6.9E-16 T 14-09-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 AY555_RS02120 040213bd4200ab8de46fd472cca8d8f0 250 SUPERFAMILY SSF56300 19 241 1.43E-46 T 14-09-2016 IPR029052 Metallo-dependent phosphatase-like AY555_RS00165 1e537cd5db79e2725d1f452ec9c16a21 138 Pfam PF07309 Flagellar protein FlaF 7 106 2.9E-11 T 14-09-2016 IPR010845 Flagellar FlaF GO:0044781 AY555_RS00460 8e89a82c24fc89ff2459036a43174b32 310 Pfam PF03547 Membrane transport protein 159 301 2.8E-10 T 14-09-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 AY555_RS00460 8e89a82c24fc89ff2459036a43174b32 310 PANTHER PTHR31752 88 309 3.7E-28 T 14-09-2016 AY555_RS00460 8e89a82c24fc89ff2459036a43174b32 310 PANTHER PTHR31752:SF13 88 309 3.7E-28 T 14-09-2016 AY555_RS08795 6b89deb5bb56801e50b1d9d95d459537 396 PIRSF PIRSF001434 1 394 6.8E-142 T 14-09-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AY555_RS08795 6b89deb5bb56801e50b1d9d95d459537 396 SUPERFAMILY SSF53383 13 392 1.63E-113 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AY555_RS08795 6b89deb5bb56801e50b1d9d95d459537 396 Gene3D G3DSA:3.40.640.10 11 255 1.4E-90 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AY555_RS08795 6b89deb5bb56801e50b1d9d95d459537 396 PANTHER PTHR11808 8 395 1.8E-200 T 14-09-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AY555_RS08795 6b89deb5bb56801e50b1d9d95d459537 396 Gene3D G3DSA:3.90.1150.10 257 393 1.1E-51 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AY555_RS08795 6b89deb5bb56801e50b1d9d95d459537 396 PANTHER PTHR11808:SF15 8 395 1.8E-200 T 14-09-2016 AY555_RS08795 6b89deb5bb56801e50b1d9d95d459537 396 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 14 390 6.9E-146 T 14-09-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AY555_RS05500 7cee45489fe353186041fbd794af9be6 205 PANTHER PTHR30086:SF0 1 205 1.4E-71 T 14-09-2016 AY555_RS05500 7cee45489fe353186041fbd794af9be6 205 PANTHER PTHR30086 1 205 1.4E-71 T 14-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AY555_RS05500 7cee45489fe353186041fbd794af9be6 205 Pfam PF01810 LysE type translocator 14 199 6.2E-37 T 14-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AY555_RS02480 d324fdac8e37a7834a50da6dee6078d0 66 Gene3D G3DSA:2.60.260.40 10 57 3.9E-18 T 14-09-2016 IPR019401 Zinc finger, CHCC-type AY555_RS02480 d324fdac8e37a7834a50da6dee6078d0 66 Pfam PF10276 Zinc-finger domain 20 54 1.1E-13 T 14-09-2016 IPR019401 Zinc finger, CHCC-type AY555_RS05305 ee5ade3b4137461bc23cfd943c9a9495 669 PANTHER PTHR32089 277 355 4.8E-123 T 14-09-2016 AY555_RS05305 ee5ade3b4137461bc23cfd943c9a9495 669 PANTHER PTHR32089:SF40 387 666 4.8E-123 T 14-09-2016 AY555_RS05305 ee5ade3b4137461bc23cfd943c9a9495 669 PANTHER PTHR32089 387 666 4.8E-123 T 14-09-2016 AY555_RS05305 ee5ade3b4137461bc23cfd943c9a9495 669 Gene3D G3DSA:3.30.450.20 113 195 2.5E-23 T 14-09-2016 AY555_RS05305 ee5ade3b4137461bc23cfd943c9a9495 669 SUPERFAMILY SSF103190 118 206 1.18E-10 T 14-09-2016 IPR029151 Periplasmic sensor domain-like AY555_RS05305 ee5ade3b4137461bc23cfd943c9a9495 669 Pfam PF02743 Cache domain 72 282 1.1E-25 T 14-09-2016 IPR033479 Double Cache domain 1 AY555_RS05305 ee5ade3b4137461bc23cfd943c9a9495 669 Gene3D G3DSA:1.10.287.950 428 633 4.0E-46 T 14-09-2016 AY555_RS05305 ee5ade3b4137461bc23cfd943c9a9495 669 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 481 662 4.5E-35 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AY555_RS05305 ee5ade3b4137461bc23cfd943c9a9495 669 SMART SM00304 320 373 7.5E-9 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AY555_RS05305 ee5ade3b4137461bc23cfd943c9a9495 669 Pfam PF00672 HAMP domain 301 368 6.4E-8 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AY555_RS05305 ee5ade3b4137461bc23cfd943c9a9495 669 PANTHER PTHR32089:SF40 277 355 4.8E-123 T 14-09-2016 AY555_RS05305 ee5ade3b4137461bc23cfd943c9a9495 669 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 584 613 2.0E-19 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AY555_RS05305 ee5ade3b4137461bc23cfd943c9a9495 669 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 429 458 2.0E-19 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AY555_RS05305 ee5ade3b4137461bc23cfd943c9a9495 669 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 536 565 2.0E-19 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AY555_RS05305 ee5ade3b4137461bc23cfd943c9a9495 669 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 507 534 2.0E-19 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AY555_RS05305 ee5ade3b4137461bc23cfd943c9a9495 669 SMART SM00283 409 663 1.9E-46 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AY555_RS05305 ee5ade3b4137461bc23cfd943c9a9495 669 SUPERFAMILY SSF58104 415 662 2.88E-59 T 14-09-2016 AY555_RS05305 ee5ade3b4137461bc23cfd943c9a9495 669 SUPERFAMILY SSF58104 349 375 2.88E-59 T 14-09-2016 AY555_RS05305 ee5ade3b4137461bc23cfd943c9a9495 669 Gene3D G3DSA:3.30.450.20 199 257 6.2E-4 T 14-09-2016 AY555_RS02090 d6492bcbe72a80e30ace87b2966b9fb7 806 Gene3D G3DSA:3.30.450.20 194 309 2.2E-10 T 14-09-2016 AY555_RS02090 d6492bcbe72a80e30ace87b2966b9fb7 806 SUPERFAMILY SSF55874 649 783 1.29E-8 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS02090 d6492bcbe72a80e30ace87b2966b9fb7 806 Gene3D G3DSA:3.30.450.20 440 509 3.1E-8 T 14-09-2016 AY555_RS02090 d6492bcbe72a80e30ace87b2966b9fb7 806 Pfam PF13188 PAS domain 457 493 0.0029 T 14-09-2016 IPR000014 PAS domain AY555_RS02090 d6492bcbe72a80e30ace87b2966b9fb7 806 Pfam PF13188 PAS domain 197 246 1.1E-4 T 14-09-2016 IPR000014 PAS domain AY555_RS02090 d6492bcbe72a80e30ace87b2966b9fb7 806 Gene3D G3DSA:3.30.565.10 649 740 1.0E-4 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS02090 d6492bcbe72a80e30ace87b2966b9fb7 806 SUPERFAMILY SSF55785 437 511 4.71E-10 T 14-09-2016 IPR000014 PAS domain AY555_RS02090 d6492bcbe72a80e30ace87b2966b9fb7 806 SUPERFAMILY SSF55785 194 309 1.68E-10 T 14-09-2016 IPR000014 PAS domain AY555_RS02090 d6492bcbe72a80e30ace87b2966b9fb7 806 Gene3D G3DSA:3.30.450.20 318 439 2.0E-5 T 14-09-2016 AY555_RS02090 d6492bcbe72a80e30ace87b2966b9fb7 806 SMART SM00091 453 519 1.8 T 14-09-2016 IPR000014 PAS domain AY555_RS02090 d6492bcbe72a80e30ace87b2966b9fb7 806 SMART SM00091 197 261 2.3 T 14-09-2016 IPR000014 PAS domain AY555_RS02090 d6492bcbe72a80e30ace87b2966b9fb7 806 Pfam PF12860 PAS fold 329 443 2.1E-7 T 14-09-2016 AY555_RS02090 d6492bcbe72a80e30ace87b2966b9fb7 806 PANTHER PTHR24423 584 783 3.4E-15 T 14-09-2016 AY555_RS02090 d6492bcbe72a80e30ace87b2966b9fb7 806 PANTHER PTHR24423 179 387 3.4E-15 T 14-09-2016 AY555_RS02090 d6492bcbe72a80e30ace87b2966b9fb7 806 PANTHER PTHR24423 406 458 3.4E-15 T 14-09-2016 AY555_RS01565 65432e445b632af681b9ded217596662 198 PIRSF PIRSF000847 1 191 1.3E-46 T 14-09-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 AY555_RS01565 65432e445b632af681b9ded217596662 198 PANTHER PTHR14269 5 176 3.1E-46 T 14-09-2016 AY555_RS01565 65432e445b632af681b9ded217596662 198 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 14-09-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AY555_RS01565 65432e445b632af681b9ded217596662 198 Pfam PF01066 CDP-alcohol phosphatidyltransferase 5 71 3.1E-17 T 14-09-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AY555_RS01565 65432e445b632af681b9ded217596662 198 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 177 4.2E-48 T 14-09-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 AY555_RS02400 bf1d79ac5c4d8e3fe6826f8f5798031d 265 PRINTS PR01714 Ferric iron reductase signature 214 232 8.6E-7 T 14-09-2016 IPR008090 Ferric iron reductase AY555_RS02400 bf1d79ac5c4d8e3fe6826f8f5798031d 265 PRINTS PR01714 Ferric iron reductase signature 144 160 8.6E-7 T 14-09-2016 IPR008090 Ferric iron reductase AY555_RS02400 bf1d79ac5c4d8e3fe6826f8f5798031d 265 PRINTS PR01714 Ferric iron reductase signature 63 78 8.6E-7 T 14-09-2016 IPR008090 Ferric iron reductase AY555_RS02400 bf1d79ac5c4d8e3fe6826f8f5798031d 265 TIGRFAM TIGR03951 Fe_III_red_FhuF: siderophore-iron reductase FhuF 60 234 4.7E-35 T 14-09-2016 IPR008090 Ferric iron reductase AY555_RS02400 bf1d79ac5c4d8e3fe6826f8f5798031d 265 Pfam PF06276 Ferric iron reductase FhuF-like transporter 63 206 6.3E-12 T 14-09-2016 IPR022770 Ferric iron reductase FhuF domain AY555_RS02400 bf1d79ac5c4d8e3fe6826f8f5798031d 265 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 214 234 2.9E-6 T 14-09-2016 IPR024726 Ferric iron reductase, C-terminal GO:0051537 AY555_RS03365 e4ab74d4906a6814ae37cec0a49705ba 251 Pfam PF01863 Protein of unknown function DUF45 41 234 2.0E-43 T 14-09-2016 IPR002725 Protein of unknown function DUF45 AY555_RS03365 e4ab74d4906a6814ae37cec0a49705ba 251 PANTHER PTHR30399:SF3 27 245 1.3E-42 T 14-09-2016 AY555_RS03365 e4ab74d4906a6814ae37cec0a49705ba 251 PANTHER PTHR30399 27 245 1.3E-42 T 14-09-2016 AY555_RS08220 b582bac4535bbb9ca7bb67021fca3b2f 350 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 321 130.403 T 14-09-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 AY555_RS08220 b582bac4535bbb9ca7bb67021fca3b2f 350 Gene3D G3DSA:3.40.718.10 2 314 5.6E-116 T 14-09-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AY555_RS08220 b582bac4535bbb9ca7bb67021fca3b2f 350 Pfam PF02504 Fatty acid synthesis protein 2 306 1.9E-99 T 14-09-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 AY555_RS08220 b582bac4535bbb9ca7bb67021fca3b2f 350 PANTHER PTHR30100:SF1 1 323 7.0E-119 T 14-09-2016 AY555_RS08220 b582bac4535bbb9ca7bb67021fca3b2f 350 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 12 315 9.8E-90 T 14-09-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 AY555_RS08220 b582bac4535bbb9ca7bb67021fca3b2f 350 SUPERFAMILY SSF53659 2 313 9.05E-94 T 14-09-2016 AY555_RS08220 b582bac4535bbb9ca7bb67021fca3b2f 350 PANTHER PTHR30100 1 323 7.0E-119 T 14-09-2016 AY555_RS08220 b582bac4535bbb9ca7bb67021fca3b2f 350 PIRSF PIRSF002465 1 321 2.5E-109 T 14-09-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 AY555_RS09945 7f6a54abd7a63f518bc77571f118372b 340 TIGRFAM TIGR00749 glk: glucokinase 18 325 3.1E-82 T 14-09-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AY555_RS09945 7f6a54abd7a63f518bc77571f118372b 340 PANTHER PTHR30514:SF0 11 324 9.5E-72 T 14-09-2016 AY555_RS09945 7f6a54abd7a63f518bc77571f118372b 340 SUPERFAMILY SSF53067 20 322 1.8E-46 T 14-09-2016 AY555_RS09945 7f6a54abd7a63f518bc77571f118372b 340 Pfam PF02685 Glucokinase 18 323 5.1E-99 T 14-09-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AY555_RS09945 7f6a54abd7a63f518bc77571f118372b 340 Gene3D G3DSA:3.40.367.20 112 313 1.1E-67 T 14-09-2016 AY555_RS09945 7f6a54abd7a63f518bc77571f118372b 340 PANTHER PTHR30514 11 324 9.5E-72 T 14-09-2016 AY555_RS07145 c58676f9d10c170d275b41ed5e402e0c 177 SUPERFAMILY SSF54637 25 137 1.31E-25 T 14-09-2016 IPR029069 HotDog domain AY555_RS07145 c58676f9d10c170d275b41ed5e402e0c 177 Gene3D G3DSA:3.10.129.10 26 136 4.3E-18 T 14-09-2016 IPR029069 HotDog domain AY555_RS07145 c58676f9d10c170d275b41ed5e402e0c 177 PANTHER PTHR12475:SF4 19 134 6.1E-39 T 14-09-2016 AY555_RS07145 c58676f9d10c170d275b41ed5e402e0c 177 PANTHER PTHR12475 19 134 6.1E-39 T 14-09-2016 AY555_RS07145 c58676f9d10c170d275b41ed5e402e0c 177 Pfam PF13279 Thioesterase-like superfamily 32 163 5.7E-18 T 14-09-2016 AY555_RS03140 ad97e2ae4fccb9876023154dca1001c1 233 SUPERFAMILY SSF52540 16 231 4.21E-64 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS03140 ad97e2ae4fccb9876023154dca1001c1 233 Pfam PF00005 ABC transporter 33 179 6.4E-30 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AY555_RS03140 ad97e2ae4fccb9876023154dca1001c1 233 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AY555_RS03140 ad97e2ae4fccb9876023154dca1001c1 233 PANTHER PTHR24220 15 230 2.2E-88 T 14-09-2016 AY555_RS03140 ad97e2ae4fccb9876023154dca1001c1 233 Gene3D G3DSA:3.40.50.300 9 231 1.2E-63 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS03140 ad97e2ae4fccb9876023154dca1001c1 233 SMART SM00382 42 228 3.0E-13 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS03140 ad97e2ae4fccb9876023154dca1001c1 233 PANTHER PTHR24220:SF509 15 230 2.2E-88 T 14-09-2016 AY555_RS04415 cb0172c5fe1fdbc9579b45241ed0a183 259 Pfam PF01209 ubiE/COQ5 methyltransferase family 22 257 7.5E-85 T 14-09-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 AY555_RS04415 cb0172c5fe1fdbc9579b45241ed0a183 259 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 166 180 - T 14-09-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 AY555_RS04415 cb0172c5fe1fdbc9579b45241ed0a183 259 Gene3D G3DSA:3.40.50.150 27 258 2.2E-56 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS04415 cb0172c5fe1fdbc9579b45241ed0a183 259 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 27 257 1.5E-77 T 14-09-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 AY555_RS04415 cb0172c5fe1fdbc9579b45241ed0a183 259 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 18 258 37.495 T 14-09-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 AY555_RS04415 cb0172c5fe1fdbc9579b45241ed0a183 259 PANTHER PTHR10108:SF24 4 259 6.5E-123 T 14-09-2016 AY555_RS04415 cb0172c5fe1fdbc9579b45241ed0a183 259 SUPERFAMILY SSF53335 20 252 1.01E-43 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS04415 cb0172c5fe1fdbc9579b45241ed0a183 259 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 38 53 - T 14-09-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 AY555_RS04415 cb0172c5fe1fdbc9579b45241ed0a183 259 PANTHER PTHR10108 4 259 6.5E-123 T 14-09-2016 AY555_RS08985 6e18d82d0d66a07c1375fe61075abc75 516 SUPERFAMILY SSF52374 7 333 7.93E-71 T 14-09-2016 AY555_RS08985 6e18d82d0d66a07c1375fe61075abc75 516 PANTHER PTHR10890 6 509 4.6E-131 T 14-09-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AY555_RS08985 6e18d82d0d66a07c1375fe61075abc75 516 SUPERFAMILY SSF47323 389 509 1.05E-15 T 14-09-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS08985 6e18d82d0d66a07c1375fe61075abc75 516 Gene3D G3DSA:3.40.50.620 23 327 3.4E-77 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS08985 6e18d82d0d66a07c1375fe61075abc75 516 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 6 510 31.536 T 14-09-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 AY555_RS08985 6e18d82d0d66a07c1375fe61075abc75 516 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 19 332 1.2E-82 T 14-09-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 AY555_RS08985 6e18d82d0d66a07c1375fe61075abc75 516 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 29 40 1.3E-20 T 14-09-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AY555_RS08985 6e18d82d0d66a07c1375fe61075abc75 516 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 65 74 1.3E-20 T 14-09-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AY555_RS08985 6e18d82d0d66a07c1375fe61075abc75 516 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 206 224 1.3E-20 T 14-09-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AY555_RS08985 6e18d82d0d66a07c1375fe61075abc75 516 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 237 258 1.3E-20 T 14-09-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AY555_RS08985 6e18d82d0d66a07c1375fe61075abc75 516 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 6 508 7.8E-110 T 14-09-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 AY555_RS07285 f19309b7c3e66e540fe4bdaa4d526a34 159 SMART SM00881 29 127 3.7E-21 T 14-09-2016 IPR003781 CoA-binding GO:0048037 AY555_RS07285 f19309b7c3e66e540fe4bdaa4d526a34 159 SUPERFAMILY SSF51735 23 155 1.01E-38 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS07285 f19309b7c3e66e540fe4bdaa4d526a34 159 Gene3D G3DSA:3.40.50.720 23 156 2.8E-45 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS07285 f19309b7c3e66e540fe4bdaa4d526a34 159 PANTHER PTHR33303 16 157 4.1E-47 T 14-09-2016 AY555_RS07285 f19309b7c3e66e540fe4bdaa4d526a34 159 Pfam PF13380 CoA binding domain 33 153 3.0E-35 T 14-09-2016 IPR003781 CoA-binding GO:0048037 AY555_RS04745 516f2ee0859a615d5537de1687479730 310 SUPERFAMILY SSF64182 60 129 2.09E-11 T 14-09-2016 AY555_RS04745 516f2ee0859a615d5537de1687479730 310 SUPERFAMILY SSF64182 173 300 2.09E-11 T 14-09-2016 AY555_RS04745 516f2ee0859a615d5537de1687479730 310 Gene3D G3DSA:3.90.1640.10 64 130 7.5E-4 T 14-09-2016 AY555_RS04745 516f2ee0859a615d5537de1687479730 310 PIRSF PIRSF028235 1 310 1.7E-147 T 14-09-2016 IPR016877 Uncharacterised conserved protein UCP028235 AY555_RS07155 d4e6cefb8f5703ef79da234d51941d57 780 Gene3D G3DSA:3.40.50.720 3 194 6.1E-47 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS07155 d4e6cefb8f5703ef79da234d51941d57 780 Pfam PF00378 Enoyl-CoA hydratase/isomerase 476 611 9.6E-11 T 14-09-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AY555_RS07155 d4e6cefb8f5703ef79da234d51941d57 780 SUPERFAMILY SSF52096 469 777 3.03E-36 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AY555_RS07155 d4e6cefb8f5703ef79da234d51941d57 780 PANTHER PTHR23309 1 458 1.7E-101 T 14-09-2016 AY555_RS07155 d4e6cefb8f5703ef79da234d51941d57 780 SUPERFAMILY SSF51735 4 192 6.54E-47 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS07155 d4e6cefb8f5703ef79da234d51941d57 780 PANTHER PTHR23309:SF2 1 458 1.7E-101 T 14-09-2016 AY555_RS07155 d4e6cefb8f5703ef79da234d51941d57 780 SUPERFAMILY SSF48179 347 436 1.36E-14 T 14-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AY555_RS07155 d4e6cefb8f5703ef79da234d51941d57 780 Gene3D G3DSA:3.90.226.10 472 655 6.8E-24 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AY555_RS07155 d4e6cefb8f5703ef79da234d51941d57 780 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 7 190 1.7E-48 T 14-09-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 AY555_RS07155 d4e6cefb8f5703ef79da234d51941d57 780 SUPERFAMILY SSF48179 192 301 4.08E-19 T 14-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AY555_RS07155 d4e6cefb8f5703ef79da234d51941d57 780 Gene3D G3DSA:1.10.1040.10 348 407 1.3E-12 T 14-09-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AY555_RS07155 d4e6cefb8f5703ef79da234d51941d57 780 Gene3D G3DSA:1.10.1040.10 195 294 1.6E-15 T 14-09-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AY555_RS07155 d4e6cefb8f5703ef79da234d51941d57 780 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 349 406 1.6E-8 T 14-09-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 AY555_RS07155 d4e6cefb8f5703ef79da234d51941d57 780 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 193 294 1.1E-12 T 14-09-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 AY555_RS01970 4e5439b3100d535f2f4865e52ee39aae 99 SUPERFAMILY SSF141091 1 97 1.57E-37 T 14-09-2016 IPR028909 Ribosomal protein L21-like GO:0005840 AY555_RS01970 4e5439b3100d535f2f4865e52ee39aae 99 PANTHER PTHR21349 1 99 4.4E-44 T 14-09-2016 AY555_RS01970 4e5439b3100d535f2f4865e52ee39aae 99 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 97 8.2E-32 T 14-09-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS01970 4e5439b3100d535f2f4865e52ee39aae 99 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 97 4.0E-40 T 14-09-2016 IPR028909 Ribosomal protein L21-like GO:0005840 AY555_RS01970 4e5439b3100d535f2f4865e52ee39aae 99 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 99 26.73 T 14-09-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS09410 67fe6e0c07b081605694442a76db206d 246 PANTHER PTHR33446:SF2 59 246 1.4E-17 T 14-09-2016 AY555_RS09410 67fe6e0c07b081605694442a76db206d 246 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 167 245 3.0E-16 T 14-09-2016 IPR006260 TonB, C-terminal GO:0006810 AY555_RS09410 67fe6e0c07b081605694442a76db206d 246 PANTHER PTHR33446 59 246 1.4E-17 T 14-09-2016 AY555_RS09410 67fe6e0c07b081605694442a76db206d 246 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 169 245 3.1E-18 T 14-09-2016 IPR006260 TonB, C-terminal GO:0006810 AY555_RS09410 67fe6e0c07b081605694442a76db206d 246 Gene3D G3DSA:3.30.1150.10 133 245 8.5E-22 T 14-09-2016 AY555_RS09410 67fe6e0c07b081605694442a76db206d 246 SUPERFAMILY SSF74653 143 244 3.01E-20 T 14-09-2016 AY555_RS06185 c375f0c654b76be6942b7593c197d5e9 419 PANTHER PTHR22726:SF10 1 285 2.3E-38 T 14-09-2016 AY555_RS06185 c375f0c654b76be6942b7593c197d5e9 419 Gene3D G3DSA:3.30.2010.10 5 84 9.2E-17 T 14-09-2016 AY555_RS06185 c375f0c654b76be6942b7593c197d5e9 419 PANTHER PTHR22726 1 285 2.3E-38 T 14-09-2016 AY555_RS06185 c375f0c654b76be6942b7593c197d5e9 419 SUPERFAMILY SSF48452 246 394 2.16E-15 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS06185 c375f0c654b76be6942b7593c197d5e9 419 Gene3D G3DSA:1.25.40.10 243 413 1.2E-18 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS06185 c375f0c654b76be6942b7593c197d5e9 419 Pfam PF13432 Tetratricopeptide repeat 247 311 8.2E-7 T 14-09-2016 AY555_RS06185 c375f0c654b76be6942b7593c197d5e9 419 Pfam PF01435 Peptidase family M48 4 195 1.1E-32 T 14-09-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AY555_RS08605 21afcf9215e745e65d457ada13bfdaae 328 Pfam PF01551 Peptidase family M23 223 317 4.6E-30 T 14-09-2016 IPR016047 Peptidase M23 AY555_RS08605 21afcf9215e745e65d457ada13bfdaae 328 PANTHER PTHR21666 200 326 4.9E-40 T 14-09-2016 AY555_RS08605 21afcf9215e745e65d457ada13bfdaae 328 SUPERFAMILY SSF54106 56 98 1.57E-7 T 14-09-2016 IPR018392 LysM domain AY555_RS08605 21afcf9215e745e65d457ada13bfdaae 328 SUPERFAMILY SSF54106 101 146 8.11E-10 T 14-09-2016 IPR018392 LysM domain AY555_RS08605 21afcf9215e745e65d457ada13bfdaae 328 Gene3D G3DSA:2.70.70.10 183 323 5.0E-42 T 14-09-2016 AY555_RS08605 21afcf9215e745e65d457ada13bfdaae 328 SUPERFAMILY SSF51261 135 321 1.62E-49 T 14-09-2016 IPR011055 Duplicated hybrid motif AY555_RS08605 21afcf9215e745e65d457ada13bfdaae 328 SMART SM00257 102 146 6.1E-11 T 14-09-2016 IPR018392 LysM domain AY555_RS08605 21afcf9215e745e65d457ada13bfdaae 328 SMART SM00257 54 98 1.2E-8 T 14-09-2016 IPR018392 LysM domain AY555_RS08605 21afcf9215e745e65d457ada13bfdaae 328 Pfam PF01476 LysM domain 103 146 3.1E-9 T 14-09-2016 IPR018392 LysM domain AY555_RS08605 21afcf9215e745e65d457ada13bfdaae 328 Pfam PF01476 LysM domain 57 98 8.2E-8 T 14-09-2016 IPR018392 LysM domain AY555_RS08605 21afcf9215e745e65d457ada13bfdaae 328 Gene3D G3DSA:3.10.350.10 102 147 5.6E-14 T 14-09-2016 IPR018392 LysM domain AY555_RS08605 21afcf9215e745e65d457ada13bfdaae 328 Gene3D G3DSA:3.10.350.10 56 99 1.5E-10 T 14-09-2016 IPR018392 LysM domain AY555_RS01040 ac3ff63b14bbd0111acbc08bbeca0eaa 396 SUPERFAMILY SSF50447 207 303 6.09E-30 T 14-09-2016 IPR009000 Translation protein, beta-barrel domain AY555_RS01040 ac3ff63b14bbd0111acbc08bbeca0eaa 396 SUPERFAMILY SSF52540 9 228 1.14E-59 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS01040 ac3ff63b14bbd0111acbc08bbeca0eaa 396 Gene3D G3DSA:2.40.30.10 214 300 6.1E-35 T 14-09-2016 AY555_RS01040 ac3ff63b14bbd0111acbc08bbeca0eaa 396 Gene3D G3DSA:3.40.50.300 5 213 2.9E-68 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS01040 ac3ff63b14bbd0111acbc08bbeca0eaa 396 PANTHER PTHR23115:SF151 1 394 1.0E-250 T 14-09-2016 AY555_RS01040 ac3ff63b14bbd0111acbc08bbeca0eaa 396 Gene3D G3DSA:2.40.30.10 302 394 1.2E-44 T 14-09-2016 AY555_RS01040 ac3ff63b14bbd0111acbc08bbeca0eaa 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 9.9E-57 T 14-09-2016 AY555_RS01040 ac3ff63b14bbd0111acbc08bbeca0eaa 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 2.6E-31 T 14-09-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AY555_RS01040 ac3ff63b14bbd0111acbc08bbeca0eaa 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.592 T 14-09-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 AY555_RS01040 ac3ff63b14bbd0111acbc08bbeca0eaa 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 394 2.8E-225 T 14-09-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 AY555_RS01040 ac3ff63b14bbd0111acbc08bbeca0eaa 396 PANTHER PTHR23115 1 394 1.0E-250 T 14-09-2016 AY555_RS01040 ac3ff63b14bbd0111acbc08bbeca0eaa 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 149 1.7E-14 T 14-09-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AY555_RS01040 ac3ff63b14bbd0111acbc08bbeca0eaa 396 SUPERFAMILY SSF50465 304 396 1.51E-34 T 14-09-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AY555_RS01040 ac3ff63b14bbd0111acbc08bbeca0eaa 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-09-2016 IPR031157 Tr-type G domain, conserved site AY555_RS01040 ac3ff63b14bbd0111acbc08bbeca0eaa 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 8.0E-18 T 14-09-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 AY555_RS01040 ac3ff63b14bbd0111acbc08bbeca0eaa 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 4.0E-24 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AY555_RS01040 ac3ff63b14bbd0111acbc08bbeca0eaa 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 4.0E-24 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AY555_RS01040 ac3ff63b14bbd0111acbc08bbeca0eaa 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 4.0E-24 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AY555_RS01040 ac3ff63b14bbd0111acbc08bbeca0eaa 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 4.0E-24 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AY555_RS01040 ac3ff63b14bbd0111acbc08bbeca0eaa 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.0E-24 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AY555_RS00975 ac3ff63b14bbd0111acbc08bbeca0eaa 396 SUPERFAMILY SSF50447 207 303 6.09E-30 T 14-09-2016 IPR009000 Translation protein, beta-barrel domain AY555_RS00975 ac3ff63b14bbd0111acbc08bbeca0eaa 396 SUPERFAMILY SSF52540 9 228 1.14E-59 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS00975 ac3ff63b14bbd0111acbc08bbeca0eaa 396 Gene3D G3DSA:2.40.30.10 214 300 6.1E-35 T 14-09-2016 AY555_RS00975 ac3ff63b14bbd0111acbc08bbeca0eaa 396 Gene3D G3DSA:3.40.50.300 5 213 2.9E-68 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS00975 ac3ff63b14bbd0111acbc08bbeca0eaa 396 PANTHER PTHR23115:SF151 1 394 1.0E-250 T 14-09-2016 AY555_RS00975 ac3ff63b14bbd0111acbc08bbeca0eaa 396 Gene3D G3DSA:2.40.30.10 302 394 1.2E-44 T 14-09-2016 AY555_RS00975 ac3ff63b14bbd0111acbc08bbeca0eaa 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 9.9E-57 T 14-09-2016 AY555_RS00975 ac3ff63b14bbd0111acbc08bbeca0eaa 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 2.6E-31 T 14-09-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AY555_RS00975 ac3ff63b14bbd0111acbc08bbeca0eaa 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.592 T 14-09-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 AY555_RS00975 ac3ff63b14bbd0111acbc08bbeca0eaa 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 394 2.8E-225 T 14-09-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 AY555_RS00975 ac3ff63b14bbd0111acbc08bbeca0eaa 396 PANTHER PTHR23115 1 394 1.0E-250 T 14-09-2016 AY555_RS00975 ac3ff63b14bbd0111acbc08bbeca0eaa 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 149 1.7E-14 T 14-09-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AY555_RS00975 ac3ff63b14bbd0111acbc08bbeca0eaa 396 SUPERFAMILY SSF50465 304 396 1.51E-34 T 14-09-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AY555_RS00975 ac3ff63b14bbd0111acbc08bbeca0eaa 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-09-2016 IPR031157 Tr-type G domain, conserved site AY555_RS00975 ac3ff63b14bbd0111acbc08bbeca0eaa 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 8.0E-18 T 14-09-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 AY555_RS00975 ac3ff63b14bbd0111acbc08bbeca0eaa 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 4.0E-24 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AY555_RS00975 ac3ff63b14bbd0111acbc08bbeca0eaa 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 4.0E-24 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AY555_RS00975 ac3ff63b14bbd0111acbc08bbeca0eaa 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 4.0E-24 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AY555_RS00975 ac3ff63b14bbd0111acbc08bbeca0eaa 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 4.0E-24 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AY555_RS00975 ac3ff63b14bbd0111acbc08bbeca0eaa 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.0E-24 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AY555_RS03670 938875021a861d58af9fe16358141a45 230 PANTHER PTHR10146 20 228 2.1E-81 T 14-09-2016 IPR011078 Uncharacterised protein family UPF0001 AY555_RS03670 938875021a861d58af9fe16358141a45 230 Gene3D G3DSA:3.20.20.10 14 229 7.8E-74 T 14-09-2016 IPR029066 PLP-binding barrel AY555_RS03670 938875021a861d58af9fe16358141a45 230 SUPERFAMILY SSF51419 12 226 2.62E-70 T 14-09-2016 IPR029066 PLP-binding barrel AY555_RS03670 938875021a861d58af9fe16358141a45 230 Pfam PF01168 Alanine racemase, N-terminal domain 22 228 9.0E-21 T 14-09-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AY555_RS03670 938875021a861d58af9fe16358141a45 230 PIRSF PIRSF004848 10 230 9.0E-64 T 14-09-2016 IPR011078 Uncharacterised protein family UPF0001 AY555_RS03670 938875021a861d58af9fe16358141a45 230 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 15 228 1.3E-53 T 14-09-2016 IPR011078 Uncharacterised protein family UPF0001 AY555_RS09495 e43a417343070ac4eb86830516c6cb95 604 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 70 600 2.4E-235 T 14-09-2016 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00917 AY555_RS09495 e43a417343070ac4eb86830516c6cb95 604 SUPERFAMILY SSF53474 241 537 2.39E-39 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AY555_RS09495 e43a417343070ac4eb86830516c6cb95 604 Gene3D G3DSA:3.40.50.1820 228 571 2.4E-32 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AY555_RS09495 e43a417343070ac4eb86830516c6cb95 604 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 112 284 2.4E-78 T 14-09-2016 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- AY555_RS09495 e43a417343070ac4eb86830516c6cb95 604 PANTHER PTHR36837 22 602 9.1E-236 T 14-09-2016 AY555_RS09495 e43a417343070ac4eb86830516c6cb95 604 PANTHER PTHR36837:SF2 22 602 9.1E-236 T 14-09-2016 AY555_RS08660 31ada0e60a13928808d2fbc5357463e0 86 Gene3D G3DSA:1.10.150.250 2 79 1.3E-24 T 14-09-2016 IPR005631 Flavinator of succinate dehydrogenase AY555_RS08660 31ada0e60a13928808d2fbc5357463e0 86 SUPERFAMILY SSF109910 1 78 8.11E-22 T 14-09-2016 IPR005631 Flavinator of succinate dehydrogenase AY555_RS08660 31ada0e60a13928808d2fbc5357463e0 86 PANTHER PTHR12469 1 76 3.6E-17 T 14-09-2016 AY555_RS08660 31ada0e60a13928808d2fbc5357463e0 86 Pfam PF03937 Flavinator of succinate dehydrogenase 5 76 1.1E-22 T 14-09-2016 IPR005631 Flavinator of succinate dehydrogenase AY555_RS08660 31ada0e60a13928808d2fbc5357463e0 86 PANTHER PTHR12469:SF2 1 76 3.6E-17 T 14-09-2016 AY555_RS01125 5fb8e335fe94205e4f8d71ca71cfcb08 320 Gene3D G3DSA:1.10.620.20 9 289 2.3E-96 T 14-09-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 AY555_RS01125 5fb8e335fe94205e4f8d71ca71cfcb08 320 PANTHER PTHR23409:SF18 13 317 4.8E-60 T 14-09-2016 AY555_RS01125 5fb8e335fe94205e4f8d71ca71cfcb08 320 Pfam PF00268 Ribonucleotide reductase, small chain 10 282 1.9E-69 T 14-09-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 AY555_RS01125 5fb8e335fe94205e4f8d71ca71cfcb08 320 SUPERFAMILY SSF47240 7 319 3.63E-87 T 14-09-2016 IPR009078 Ferritin-like superfamily AY555_RS01125 5fb8e335fe94205e4f8d71ca71cfcb08 320 PANTHER PTHR23409 13 317 4.8E-60 T 14-09-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 AY555_RS01125 5fb8e335fe94205e4f8d71ca71cfcb08 320 PIRSF PIRSF000355 3 318 1.1E-103 T 14-09-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 AY555_RS02980 1edc82bd7ef9d56367769f0e20f5ee34 435 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 6 427 49.009 T 14-09-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 AY555_RS02980 1edc82bd7ef9d56367769f0e20f5ee34 435 PANTHER PTHR23420 6 435 0.0 T 14-09-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 AY555_RS02980 1edc82bd7ef9d56367769f0e20f5ee34 435 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 82 96 - T 14-09-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 AY555_RS02980 1edc82bd7ef9d56367769f0e20f5ee34 435 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 12 427 1.4E-193 T 14-09-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 AY555_RS02980 1edc82bd7ef9d56367769f0e20f5ee34 435 SMART SM00996 10 434 0.0 T 14-09-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 AY555_RS02980 1edc82bd7ef9d56367769f0e20f5ee34 435 SUPERFAMILY SSF52283 356 435 1.36E-121 T 14-09-2016 AY555_RS02980 1edc82bd7ef9d56367769f0e20f5ee34 435 SUPERFAMILY SSF52283 7 195 1.36E-121 T 14-09-2016 AY555_RS02980 1edc82bd7ef9d56367769f0e20f5ee34 435 Gene3D G3DSA:3.40.50.1480 356 435 2.9E-144 T 14-09-2016 AY555_RS02980 1edc82bd7ef9d56367769f0e20f5ee34 435 Gene3D G3DSA:3.40.50.1480 10 197 2.9E-144 T 14-09-2016 AY555_RS02980 1edc82bd7ef9d56367769f0e20f5ee34 435 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 10 146 5.1E-73 T 14-09-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 AY555_RS02980 1edc82bd7ef9d56367769f0e20f5ee34 435 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 196 355 3.4E-82 T 14-09-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 AY555_RS02980 1edc82bd7ef9d56367769f0e20f5ee34 435 Gene3D G3DSA:3.40.50.720 198 354 7.8E-52 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS02980 1edc82bd7ef9d56367769f0e20f5ee34 435 SMART SM00997 196 355 1.6E-112 T 14-09-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 AY555_RS02980 1edc82bd7ef9d56367769f0e20f5ee34 435 SUPERFAMILY SSF51735 196 355 1.29E-78 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS02980 1edc82bd7ef9d56367769f0e20f5ee34 435 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 218 234 - T 14-09-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 AY555_RS02980 1edc82bd7ef9d56367769f0e20f5ee34 435 PIRSF PIRSF001109 2 435 5.3E-200 T 14-09-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 AY555_RS03070 4d07f829fe3892cd3f8aee95581d871d 205 PANTHER PTHR12124 17 189 2.4E-72 T 14-09-2016 AY555_RS03070 4d07f829fe3892cd3f8aee95581d871d 205 SUPERFAMILY SSF53098 18 193 1.48E-47 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AY555_RS03070 4d07f829fe3892cd3f8aee95581d871d 205 PANTHER PTHR12124:SF48 17 189 2.4E-72 T 14-09-2016 AY555_RS03070 4d07f829fe3892cd3f8aee95581d871d 205 Gene3D G3DSA:3.30.420.10 18 180 9.4E-22 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AY555_RS03070 4d07f829fe3892cd3f8aee95581d871d 205 Pfam PF01612 3'-5' exonuclease 19 168 8.6E-33 T 14-09-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AY555_RS03070 4d07f829fe3892cd3f8aee95581d871d 205 SMART SM00474 1 171 7.7E-33 T 14-09-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AY555_RS02295 c08ed6e44dd29e462759a01bf3515d29 467 SUPERFAMILY SSF53686 2 460 2.27E-160 T 14-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AY555_RS02295 c08ed6e44dd29e462759a01bf3515d29 467 Pfam PF14821 Threonine synthase N terminus 2 80 8.2E-26 T 14-09-2016 IPR029144 Threonine synthase, N-terminal AY555_RS02295 c08ed6e44dd29e462759a01bf3515d29 467 PANTHER PTHR10314:SF1 361 467 4.8E-153 T 14-09-2016 AY555_RS02295 c08ed6e44dd29e462759a01bf3515d29 467 PANTHER PTHR10314:SF1 25 36 4.8E-153 T 14-09-2016 AY555_RS02295 c08ed6e44dd29e462759a01bf3515d29 467 PANTHER PTHR10314 53 330 4.8E-153 T 14-09-2016 AY555_RS02295 c08ed6e44dd29e462759a01bf3515d29 467 PANTHER PTHR10314 361 467 4.8E-153 T 14-09-2016 AY555_RS02295 c08ed6e44dd29e462759a01bf3515d29 467 TIGRFAM TIGR00260 thrC: threonine synthase 69 422 2.2E-80 T 14-09-2016 IPR004450 Threonine synthase-like AY555_RS02295 c08ed6e44dd29e462759a01bf3515d29 467 Gene3D G3DSA:3.40.50.1100 202 436 4.3E-92 T 14-09-2016 AY555_RS02295 c08ed6e44dd29e462759a01bf3515d29 467 Gene3D G3DSA:3.90.1380.10 2 85 8.6E-26 T 14-09-2016 IPR029144 Threonine synthase, N-terminal AY555_RS02295 c08ed6e44dd29e462759a01bf3515d29 467 Gene3D G3DSA:3.40.50.1100 130 201 4.1E-8 T 14-09-2016 AY555_RS02295 c08ed6e44dd29e462759a01bf3515d29 467 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 92 408 1.6E-23 T 14-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AY555_RS02295 c08ed6e44dd29e462759a01bf3515d29 467 PANTHER PTHR10314 25 36 4.8E-153 T 14-09-2016 AY555_RS02295 c08ed6e44dd29e462759a01bf3515d29 467 PANTHER PTHR10314:SF1 53 330 4.8E-153 T 14-09-2016 AY555_RS04060 e5ad8978e60d6b644f19e913d09c879c 609 PANTHER PTHR30557:SF1 178 604 0.0 T 14-09-2016 AY555_RS04060 e5ad8978e60d6b644f19e913d09c879c 609 PANTHER PTHR30557 8 85 0.0 T 14-09-2016 AY555_RS04060 e5ad8978e60d6b644f19e913d09c879c 609 PANTHER PTHR30557 119 149 0.0 T 14-09-2016 AY555_RS04060 e5ad8978e60d6b644f19e913d09c879c 609 PANTHER PTHR30557 178 604 0.0 T 14-09-2016 AY555_RS04060 e5ad8978e60d6b644f19e913d09c879c 609 Pfam PF13667 ThiC-associated domain 17 87 3.0E-22 T 14-09-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 AY555_RS04060 e5ad8978e60d6b644f19e913d09c879c 609 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 126 578 1.7E-212 T 14-09-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 AY555_RS04060 e5ad8978e60d6b644f19e913d09c879c 609 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 126 581 56.563 T 14-09-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 AY555_RS04060 e5ad8978e60d6b644f19e913d09c879c 609 PANTHER PTHR30557:SF1 119 149 0.0 T 14-09-2016 AY555_RS04060 e5ad8978e60d6b644f19e913d09c879c 609 PANTHER PTHR30557:SF1 8 85 0.0 T 14-09-2016 AY555_RS04060 e5ad8978e60d6b644f19e913d09c879c 609 Pfam PF01964 Radical SAM ThiC family 127 575 1.8E-201 T 14-09-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 AY555_RS04765 3703713e843470f9f27811dc49fe69f5 399 Gene3D G3DSA:3.30.1490.20 22 105 1.9E-30 T 14-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AY555_RS04765 3703713e843470f9f27811dc49fe69f5 399 Pfam PF08442 ATP-grasp domain 2 213 3.6E-74 T 14-09-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AY555_RS04765 3703713e843470f9f27811dc49fe69f5 399 PANTHER PTHR11815 1 399 1.9E-232 T 14-09-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 AY555_RS04765 3703713e843470f9f27811dc49fe69f5 399 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 267 291 - T 14-09-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AY555_RS04765 3703713e843470f9f27811dc49fe69f5 399 PIRSF PIRSF001554 1 398 1.3E-149 T 14-09-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 AY555_RS04765 3703713e843470f9f27811dc49fe69f5 399 SUPERFAMILY SSF52210 249 395 6.02E-57 T 14-09-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AY555_RS04765 3703713e843470f9f27811dc49fe69f5 399 Pfam PF00549 CoA-ligase 272 392 8.1E-29 T 14-09-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AY555_RS04765 3703713e843470f9f27811dc49fe69f5 399 Gene3D G3DSA:3.30.470.20 106 249 9.4E-57 T 14-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AY555_RS04765 3703713e843470f9f27811dc49fe69f5 399 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 395 2.7E-159 T 14-09-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 AY555_RS04765 3703713e843470f9f27811dc49fe69f5 399 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 396 41.764 T 14-09-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 AY555_RS04765 3703713e843470f9f27811dc49fe69f5 399 Gene3D G3DSA:3.40.50.261 251 393 2.1E-68 T 14-09-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AY555_RS04765 3703713e843470f9f27811dc49fe69f5 399 SUPERFAMILY SSF56059 1 248 6.54E-80 T 14-09-2016 AY555_RS04765 3703713e843470f9f27811dc49fe69f5 399 PANTHER PTHR11815:SF1 1 399 1.9E-232 T 14-09-2016 AY555_RS06085 d6b10a119731edc213b44d66ce356afc 338 PANTHER PTHR33694:SF1 37 328 1.4E-104 T 14-09-2016 AY555_RS06085 d6b10a119731edc213b44d66ce356afc 338 SUPERFAMILY SSF54211 38 162 2.43E-39 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AY555_RS06085 d6b10a119731edc213b44d66ce356afc 338 PANTHER PTHR33694 37 328 1.4E-104 T 14-09-2016 AY555_RS06085 d6b10a119731edc213b44d66ce356afc 338 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 38 325 4.3E-96 T 14-09-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 AY555_RS06085 d6b10a119731edc213b44d66ce356afc 338 Gene3D G3DSA:3.30.230.20 38 162 3.0E-43 T 14-09-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 AY555_RS06085 d6b10a119731edc213b44d66ce356afc 338 SUPERFAMILY SSF54211 170 313 9.1E-45 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AY555_RS06085 d6b10a119731edc213b44d66ce356afc 338 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 37 315 42.553 T 14-09-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 AY555_RS06085 d6b10a119731edc213b44d66ce356afc 338 Gene3D G3DSA:3.30.1700.10 166 317 9.1E-52 T 14-09-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 AY555_RS06085 d6b10a119731edc213b44d66ce356afc 338 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 39 310 2.5E-99 T 14-09-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 AY555_RS09250 1fd916af24905b1495e18bef89d3fcd2 110 Pfam PF09923 Uncharacterized protein conserved in bacteria (DUF2155) 17 108 1.1E-32 T 14-09-2016 IPR019225 Protein of unknown function DUF2155 AY555_RS07935 0f0995f556eedd122da79e59a7420e25 216 PANTHER PTHR13696:SF54 3 216 1.1E-38 T 14-09-2016 AY555_RS07935 0f0995f556eedd122da79e59a7420e25 216 PANTHER PTHR13696 3 216 1.1E-38 T 14-09-2016 AY555_RS07935 0f0995f556eedd122da79e59a7420e25 216 Gene3D G3DSA:3.40.50.300 4 211 2.5E-36 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS07935 0f0995f556eedd122da79e59a7420e25 216 SUPERFAMILY SSF52540 3 210 2.1E-41 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS07935 0f0995f556eedd122da79e59a7420e25 216 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 6 162 2.2E-26 T 14-09-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AY555_RS07935 0f0995f556eedd122da79e59a7420e25 216 PIRSF PIRSF009320 3 215 2.5E-45 T 14-09-2016 AY555_RS08825 e8bac24346f6a33cb1974060c8de1e95 723 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 719 6.1E-211 T 14-09-2016 IPR004811 RelA/SpoT family GO:0015969 AY555_RS08825 e8bac24346f6a33cb1974060c8de1e95 723 Pfam PF02824 TGS domain 392 450 7.2E-19 T 14-09-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 AY555_RS08825 e8bac24346f6a33cb1974060c8de1e95 723 Gene3D G3DSA:3.10.20.30 390 451 6.4E-22 T 14-09-2016 IPR012675 Beta-grasp domain AY555_RS08825 e8bac24346f6a33cb1974060c8de1e95 723 SMART SM00471 41 153 3.1E-9 T 14-09-2016 IPR003607 HD/PDEase domain AY555_RS08825 e8bac24346f6a33cb1974060c8de1e95 723 SUPERFAMILY SSF109604 5 191 7.85E-67 T 14-09-2016 AY555_RS08825 e8bac24346f6a33cb1974060c8de1e95 723 SUPERFAMILY SSF81271 378 450 7.41E-22 T 14-09-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AY555_RS08825 e8bac24346f6a33cb1974060c8de1e95 723 SUPERFAMILY SSF81301 181 395 1.42E-57 T 14-09-2016 AY555_RS08825 e8bac24346f6a33cb1974060c8de1e95 723 PANTHER PTHR21262 1 723 0.0 T 14-09-2016 AY555_RS08825 e8bac24346f6a33cb1974060c8de1e95 723 Gene3D G3DSA:3.30.460.10 194 326 1.5E-41 T 14-09-2016 AY555_RS08825 e8bac24346f6a33cb1974060c8de1e95 723 Pfam PF04607 Region found in RelA / SpoT proteins 236 344 5.2E-36 T 14-09-2016 IPR007685 RelA/SpoT GO:0015969 AY555_RS08825 e8bac24346f6a33cb1974060c8de1e95 723 Pfam PF13328 HD domain 26 176 2.8E-48 T 14-09-2016 IPR003607 HD/PDEase domain AY555_RS08825 e8bac24346f6a33cb1974060c8de1e95 723 SUPERFAMILY SSF55021 650 718 6.87E-5 T 14-09-2016 AY555_RS08825 e8bac24346f6a33cb1974060c8de1e95 723 Gene3D G3DSA:3.30.70.260 649 718 4.6E-8 T 14-09-2016 AY555_RS08825 e8bac24346f6a33cb1974060c8de1e95 723 SMART SM00954 236 346 2.3E-63 T 14-09-2016 IPR007685 RelA/SpoT GO:0015969 AY555_RS08825 e8bac24346f6a33cb1974060c8de1e95 723 PANTHER PTHR21262:SF0 1 723 0.0 T 14-09-2016 AY555_RS08825 e8bac24346f6a33cb1974060c8de1e95 723 Pfam PF13291 ACT domain 643 720 3.7E-15 T 14-09-2016 IPR002912 ACT domain GO:0008152|GO:0016597 AY555_RS01375 2261d1b31aa61888e1cb39d7bb05e233 437 Gene3D G3DSA:3.40.1190.10 11 291 1.0E-87 T 14-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AY555_RS01375 2261d1b31aa61888e1cb39d7bb05e233 437 PIRSF PIRSF001563 10 436 5.7E-102 T 14-09-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 AY555_RS01375 2261d1b31aa61888e1cb39d7bb05e233 437 SUPERFAMILY SSF53623 12 290 1.41E-84 T 14-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AY555_RS01375 2261d1b31aa61888e1cb39d7bb05e233 437 Pfam PF08245 Mur ligase middle domain 52 192 6.8E-6 T 14-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AY555_RS01375 2261d1b31aa61888e1cb39d7bb05e233 437 SUPERFAMILY SSF53244 308 435 7.51E-21 T 14-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AY555_RS01375 2261d1b31aa61888e1cb39d7bb05e233 437 Gene3D G3DSA:3.90.190.20 307 433 1.3E-21 T 14-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AY555_RS01375 2261d1b31aa61888e1cb39d7bb05e233 437 PANTHER PTHR11136 12 432 8.8E-109 T 14-09-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 AY555_RS01375 2261d1b31aa61888e1cb39d7bb05e233 437 TIGRFAM TIGR01499 folC: bifunctional protein FolC 29 431 2.2E-102 T 14-09-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 AY555_RS01375 2261d1b31aa61888e1cb39d7bb05e233 437 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 142 157 - T 14-09-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 AY555_RS00295 26393aff754a152eaafd80ff3d2dd644 751 Gene3D G3DSA:3.40.50.300 3 173 2.6E-32 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS00295 26393aff754a152eaafd80ff3d2dd644 751 Pfam PF07670 Nucleoside recognition 516 688 1.1E-28 T 14-09-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 AY555_RS00295 26393aff754a152eaafd80ff3d2dd644 751 Pfam PF07670 Nucleoside recognition 356 447 1.5E-12 T 14-09-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 AY555_RS00295 26393aff754a152eaafd80ff3d2dd644 751 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 9 685 1.3E-176 T 14-09-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 AY555_RS00295 26393aff754a152eaafd80ff3d2dd644 751 PANTHER PTHR11649 656 723 1.7E-242 T 14-09-2016 AY555_RS00295 26393aff754a152eaafd80ff3d2dd644 751 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 54 69 3.0E-8 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AY555_RS00295 26393aff754a152eaafd80ff3d2dd644 751 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 3.0E-8 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AY555_RS00295 26393aff754a152eaafd80ff3d2dd644 751 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 3.0E-8 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AY555_RS00295 26393aff754a152eaafd80ff3d2dd644 751 PANTHER PTHR11649:SF37 2 149 1.7E-242 T 14-09-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 AY555_RS00295 26393aff754a152eaafd80ff3d2dd644 751 PANTHER PTHR11649:SF37 267 615 1.7E-242 T 14-09-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 AY555_RS00295 26393aff754a152eaafd80ff3d2dd644 751 SUPERFAMILY SSF52540 3 172 2.16E-39 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS00295 26393aff754a152eaafd80ff3d2dd644 751 PANTHER PTHR11649:SF37 656 723 1.7E-242 T 14-09-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 AY555_RS00295 26393aff754a152eaafd80ff3d2dd644 751 Pfam PF07664 Ferrous iron transport protein B C terminus 459 511 9.4E-15 T 14-09-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 AY555_RS00295 26393aff754a152eaafd80ff3d2dd644 751 Pfam PF02421 Ferrous iron transport protein B 4 160 4.5E-63 T 14-09-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 AY555_RS00295 26393aff754a152eaafd80ff3d2dd644 751 PANTHER PTHR11649 267 615 1.7E-242 T 14-09-2016 AY555_RS00295 26393aff754a152eaafd80ff3d2dd644 751 PANTHER PTHR11649 2 149 1.7E-242 T 14-09-2016 AY555_RS01330 81cddaee4534f9d309bd867686c668c5 290 PANTHER PTHR35936 39 285 1.7E-27 T 14-09-2016 AY555_RS01330 81cddaee4534f9d309bd867686c668c5 290 SMART SM00062 66 290 4.7E-12 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AY555_RS01330 81cddaee4534f9d309bd867686c668c5 290 Gene3D G3DSA:3.40.190.10 167 221 2.8E-8 T 14-09-2016 AY555_RS01330 81cddaee4534f9d309bd867686c668c5 290 PANTHER PTHR35936:SF3 39 285 1.7E-27 T 14-09-2016 AY555_RS01330 81cddaee4534f9d309bd867686c668c5 290 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 67 285 1.3E-24 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AY555_RS01330 81cddaee4534f9d309bd867686c668c5 290 SUPERFAMILY SSF53850 58 285 3.89E-40 T 14-09-2016 AY555_RS01330 81cddaee4534f9d309bd867686c668c5 290 Gene3D G3DSA:3.40.190.10 51 166 2.8E-19 T 14-09-2016 AY555_RS02005 60c7f3566f2e00cca96af2d494497991 152 PIRSF PIRSF004505 1 151 3.5E-40 T 14-09-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AY555_RS02005 60c7f3566f2e00cca96af2d494497991 152 Pfam PF02590 Predicted SPOUT methyltransferase 1 150 1.8E-41 T 14-09-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AY555_RS02005 60c7f3566f2e00cca96af2d494497991 152 SUPERFAMILY SSF75217 1 149 1.64E-43 T 14-09-2016 IPR029028 Alpha/beta knot methyltransferases AY555_RS02005 60c7f3566f2e00cca96af2d494497991 152 PANTHER PTHR33603 1 151 8.8E-44 T 14-09-2016 AY555_RS02005 60c7f3566f2e00cca96af2d494497991 152 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 151 26.267 T 14-09-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AY555_RS02005 60c7f3566f2e00cca96af2d494497991 152 Gene3D G3DSA:3.40.1280.10 1 151 8.1E-48 T 14-09-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AY555_RS02005 60c7f3566f2e00cca96af2d494497991 152 PANTHER PTHR33603:SF1 1 151 8.8E-44 T 14-09-2016 AY555_RS03200 71b9a5313f44e3aec71977802d0ac393 515 Pfam PF10119 Predicted methyltransferase regulatory domain 220 301 1.5E-23 T 14-09-2016 IPR018773 Methyltransferase regulatory domain, predicted AY555_RS03200 71b9a5313f44e3aec71977802d0ac393 515 Gene3D G3DSA:3.40.50.150 12 178 5.9E-31 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS03200 71b9a5313f44e3aec71977802d0ac393 515 SUPERFAMILY SSF53335 8 179 7.3E-29 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS03200 71b9a5313f44e3aec71977802d0ac393 515 Pfam PF13847 Methyltransferase domain 48 174 8.2E-17 T 14-09-2016 IPR025714 Methyltransferase domain AY555_RS03200 71b9a5313f44e3aec71977802d0ac393 515 PANTHER PTHR10108:SF829 26 160 2.8E-24 T 14-09-2016 AY555_RS03200 71b9a5313f44e3aec71977802d0ac393 515 PANTHER PTHR10108:SF829 409 511 2.8E-24 T 14-09-2016 AY555_RS03200 71b9a5313f44e3aec71977802d0ac393 515 PANTHER PTHR10108 26 160 2.8E-24 T 14-09-2016 AY555_RS03200 71b9a5313f44e3aec71977802d0ac393 515 PANTHER PTHR10108 409 511 2.8E-24 T 14-09-2016 AY555_RS03295 2d9f0dae9748a2ee650da03f87fa955e 423 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 38 282 3.8E-55 T 14-09-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 AY555_RS03295 2d9f0dae9748a2ee650da03f87fa955e 423 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 226 241 - T 14-09-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 AY555_RS03295 2d9f0dae9748a2ee650da03f87fa955e 423 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 287 392 2.1E-20 T 14-09-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 AY555_RS03295 2d9f0dae9748a2ee650da03f87fa955e 423 SUPERFAMILY SSF51419 26 284 9.3E-77 T 14-09-2016 IPR029066 PLP-binding barrel AY555_RS03295 2d9f0dae9748a2ee650da03f87fa955e 423 Gene3D G3DSA:3.20.20.10 35 268 1.3E-79 T 14-09-2016 IPR029066 PLP-binding barrel AY555_RS03295 2d9f0dae9748a2ee650da03f87fa955e 423 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 7.4E-22 T 14-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AY555_RS03295 2d9f0dae9748a2ee650da03f87fa955e 423 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 7.4E-22 T 14-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AY555_RS03295 2d9f0dae9748a2ee650da03f87fa955e 423 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 190 203 7.4E-22 T 14-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AY555_RS03295 2d9f0dae9748a2ee650da03f87fa955e 423 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 373 386 7.4E-22 T 14-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AY555_RS03295 2d9f0dae9748a2ee650da03f87fa955e 423 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 7.4E-22 T 14-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AY555_RS03295 2d9f0dae9748a2ee650da03f87fa955e 423 PRINTS PR01181 Diaminopimelate decarboxylase signature 75 92 2.7E-27 T 14-09-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AY555_RS03295 2d9f0dae9748a2ee650da03f87fa955e 423 PRINTS PR01181 Diaminopimelate decarboxylase signature 300 318 2.7E-27 T 14-09-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AY555_RS03295 2d9f0dae9748a2ee650da03f87fa955e 423 PRINTS PR01181 Diaminopimelate decarboxylase signature 383 405 2.7E-27 T 14-09-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AY555_RS03295 2d9f0dae9748a2ee650da03f87fa955e 423 PRINTS PR01181 Diaminopimelate decarboxylase signature 164 173 2.7E-27 T 14-09-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AY555_RS03295 2d9f0dae9748a2ee650da03f87fa955e 423 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 7 415 2.9E-141 T 14-09-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AY555_RS03295 2d9f0dae9748a2ee650da03f87fa955e 423 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 416 40.675 T 14-09-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AY555_RS03295 2d9f0dae9748a2ee650da03f87fa955e 423 PANTHER PTHR11482 1 423 7.3E-163 T 14-09-2016 AY555_RS03295 2d9f0dae9748a2ee650da03f87fa955e 423 PANTHER PTHR11482:SF5 1 423 7.3E-163 T 14-09-2016 AY555_RS03295 2d9f0dae9748a2ee650da03f87fa955e 423 SUPERFAMILY SSF50621 256 419 6.7E-54 T 14-09-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 AY555_RS03295 2d9f0dae9748a2ee650da03f87fa955e 423 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 57 75 - T 14-09-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 AY555_RS03295 2d9f0dae9748a2ee650da03f87fa955e 423 Gene3D G3DSA:2.40.37.10 269 421 1.9E-51 T 14-09-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 AY555_RS05445 f440ea7369c6e2d7ac305407266cdea7 103 Pfam PF02325 YGGT family 14 90 2.3E-19 T 14-09-2016 IPR003425 CCB3/YggT GO:0016020 AY555_RS05445 f440ea7369c6e2d7ac305407266cdea7 103 PANTHER PTHR33219 8 100 3.4E-12 T 14-09-2016 AY555_RS05445 f440ea7369c6e2d7ac305407266cdea7 103 PANTHER PTHR33219:SF5 8 100 3.4E-12 T 14-09-2016 AY555_RS07480 7fe9f4ba8ca43b3ca790606475e73e2f 215 SUPERFAMILY SSF46929 163 211 4.19E-7 T 14-09-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 AY555_RS07480 7fe9f4ba8ca43b3ca790606475e73e2f 215 Gene3D G3DSA:1.10.8.10 163 209 9.9E-7 T 14-09-2016 AY555_RS07480 7fe9f4ba8ca43b3ca790606475e73e2f 215 Pfam PF07499 RuvA, C-terminal domain 162 209 7.7E-9 T 14-09-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 AY555_RS07480 7fe9f4ba8ca43b3ca790606475e73e2f 215 Pfam PF01330 RuvA N terminal domain 1 61 2.8E-19 T 14-09-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 AY555_RS07480 7fe9f4ba8ca43b3ca790606475e73e2f 215 Gene3D G3DSA:2.40.50.140 1 63 1.9E-22 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS07480 7fe9f4ba8ca43b3ca790606475e73e2f 215 Pfam PF14520 Helix-hairpin-helix domain 71 129 9.8E-16 T 14-09-2016 AY555_RS07480 7fe9f4ba8ca43b3ca790606475e73e2f 215 SUPERFAMILY SSF50249 1 62 1.31E-15 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS07480 7fe9f4ba8ca43b3ca790606475e73e2f 215 SUPERFAMILY SSF47781 66 135 1.09E-19 T 14-09-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 AY555_RS07480 7fe9f4ba8ca43b3ca790606475e73e2f 215 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 210 26.734 T 14-09-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AY555_RS07480 7fe9f4ba8ca43b3ca790606475e73e2f 215 PANTHER PTHR33796 2 212 2.9E-57 T 14-09-2016 AY555_RS07480 7fe9f4ba8ca43b3ca790606475e73e2f 215 Gene3D G3DSA:1.10.150.20 66 134 5.5E-26 T 14-09-2016 AY555_RS07480 7fe9f4ba8ca43b3ca790606475e73e2f 215 SMART SM00278 72 91 2.8 T 14-09-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AY555_RS07480 7fe9f4ba8ca43b3ca790606475e73e2f 215 SMART SM00278 107 126 58.0 T 14-09-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AY555_RS00775 a288d8b69afd4f49e97f2e1ab90a765e 128 PANTHER PTHR33993 7 126 5.9E-27 T 14-09-2016 AY555_RS00775 a288d8b69afd4f49e97f2e1ab90a765e 128 PANTHER PTHR33993:SF3 7 126 5.9E-27 T 14-09-2016 AY555_RS00775 a288d8b69afd4f49e97f2e1ab90a765e 128 SUPERFAMILY SSF54593 5 123 1.51E-17 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AY555_RS00775 a288d8b69afd4f49e97f2e1ab90a765e 128 Gene3D G3DSA:3.10.180.10 5 123 1.7E-27 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AY555_RS02810 5015486995218368571da79d02346c6a 226 Pfam PF04586 Caudovirus prohead serine protease 11 162 7.6E-32 T 14-09-2016 IPR006433 Prohead protease AY555_RS02810 5015486995218368571da79d02346c6a 226 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 17 160 1.4E-33 T 14-09-2016 IPR006433 Prohead protease AY555_RS02810 5015486995218368571da79d02346c6a 226 Gene3D G3DSA:3.20.16.10 21 86 1.6E-4 T 14-09-2016 AY555_RS02810 5015486995218368571da79d02346c6a 226 SUPERFAMILY SSF50789 21 122 3.01E-7 T 14-09-2016 AY555_RS07515 01d1090af2b3a60a9da4224c458653c0 154 PRINTS PR01021 OMPA domain signature 98 114 1.0E-18 T 14-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AY555_RS07515 01d1090af2b3a60a9da4224c458653c0 154 PRINTS PR01021 OMPA domain signature 53 75 1.0E-18 T 14-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AY555_RS07515 01d1090af2b3a60a9da4224c458653c0 154 PRINTS PR01021 OMPA domain signature 83 98 1.0E-18 T 14-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AY555_RS07515 01d1090af2b3a60a9da4224c458653c0 154 PANTHER PTHR30128 49 148 6.2E-46 T 14-09-2016 AY555_RS07515 01d1090af2b3a60a9da4224c458653c0 154 Gene3D G3DSA:3.30.1330.60 42 148 2.2E-34 T 14-09-2016 IPR006665 OmpA-like domain AY555_RS07515 01d1090af2b3a60a9da4224c458653c0 154 Pfam PF00691 OmpA family 53 147 1.9E-22 T 14-09-2016 IPR006665 OmpA-like domain AY555_RS07515 01d1090af2b3a60a9da4224c458653c0 154 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 50 151 5.9E-41 T 14-09-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 AY555_RS07515 01d1090af2b3a60a9da4224c458653c0 154 ProSitePatterns PS01068 OmpA-like domain. 85 129 - T 14-09-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AY555_RS07515 01d1090af2b3a60a9da4224c458653c0 154 SUPERFAMILY SSF103088 41 148 7.19E-35 T 14-09-2016 IPR006665 OmpA-like domain AY555_RS07515 01d1090af2b3a60a9da4224c458653c0 154 PANTHER PTHR30128:SF18 49 148 6.2E-46 T 14-09-2016 AY555_RS02540 ed6ebf566c432d51e2dde8a3501f168e 314 PANTHER PTHR11557 1 303 3.7E-141 T 14-09-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AY555_RS02540 ed6ebf566c432d51e2dde8a3501f168e 314 PIRSF PIRSF001438 1 310 3.0E-113 T 14-09-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AY555_RS02540 ed6ebf566c432d51e2dde8a3501f168e 314 SUPERFAMILY SSF53850 6 224 6.92E-78 T 14-09-2016 AY555_RS02540 ed6ebf566c432d51e2dde8a3501f168e 314 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 236 252 - T 14-09-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AY555_RS02540 ed6ebf566c432d51e2dde8a3501f168e 314 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 231 302 5.8E-16 T 14-09-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AY555_RS02540 ed6ebf566c432d51e2dde8a3501f168e 314 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 7 302 2.8E-104 T 14-09-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AY555_RS02540 ed6ebf566c432d51e2dde8a3501f168e 314 SUPERFAMILY SSF54782 226 303 6.8E-19 T 14-09-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AY555_RS02540 ed6ebf566c432d51e2dde8a3501f168e 314 Gene3D G3DSA:3.40.190.10 116 204 1.4E-35 T 14-09-2016 AY555_RS02540 ed6ebf566c432d51e2dde8a3501f168e 314 PRINTS PR00151 Porphobilinogen deaminase signature 129 146 9.0E-45 T 14-09-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AY555_RS02540 ed6ebf566c432d51e2dde8a3501f168e 314 PRINTS PR00151 Porphobilinogen deaminase signature 81 100 9.0E-45 T 14-09-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AY555_RS02540 ed6ebf566c432d51e2dde8a3501f168e 314 PRINTS PR00151 Porphobilinogen deaminase signature 148 165 9.0E-45 T 14-09-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AY555_RS02540 ed6ebf566c432d51e2dde8a3501f168e 314 PRINTS PR00151 Porphobilinogen deaminase signature 235 252 9.0E-45 T 14-09-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AY555_RS02540 ed6ebf566c432d51e2dde8a3501f168e 314 PRINTS PR00151 Porphobilinogen deaminase signature 50 70 9.0E-45 T 14-09-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AY555_RS02540 ed6ebf566c432d51e2dde8a3501f168e 314 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 6 304 35.914 T 14-09-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AY555_RS02540 ed6ebf566c432d51e2dde8a3501f168e 314 Gene3D G3DSA:3.30.160.40 227 303 1.1E-17 T 14-09-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AY555_RS02540 ed6ebf566c432d51e2dde8a3501f168e 314 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 7 216 2.0E-74 T 14-09-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AY555_RS02540 ed6ebf566c432d51e2dde8a3501f168e 314 Gene3D G3DSA:3.40.190.10 4 115 7.1E-45 T 14-09-2016 AY555_RS06110 d785d571328fa960749dc6d1fdfaebd8 324 PANTHER PTHR21071:SF4 14 320 7.5E-109 T 14-09-2016 AY555_RS06110 d785d571328fa960749dc6d1fdfaebd8 324 SUPERFAMILY SSF56194 210 314 2.62E-36 T 14-09-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AY555_RS06110 d785d571328fa960749dc6d1fdfaebd8 324 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 214 312 3.6E-28 T 14-09-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AY555_RS06110 d785d571328fa960749dc6d1fdfaebd8 324 Gene3D G3DSA:3.30.43.10 14 99 7.1E-18 T 14-09-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AY555_RS06110 d785d571328fa960749dc6d1fdfaebd8 324 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 324 93.908 T 14-09-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AY555_RS06110 d785d571328fa960749dc6d1fdfaebd8 324 Gene3D G3DSA:3.30.465.10 106 240 8.9E-40 T 14-09-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AY555_RS06110 d785d571328fa960749dc6d1fdfaebd8 324 PANTHER PTHR21071 14 320 7.5E-109 T 14-09-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AY555_RS06110 d785d571328fa960749dc6d1fdfaebd8 324 Pfam PF01565 FAD binding domain 50 179 1.3E-20 T 14-09-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AY555_RS06110 d785d571328fa960749dc6d1fdfaebd8 324 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 41 313 1.7E-53 T 14-09-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AY555_RS06110 d785d571328fa960749dc6d1fdfaebd8 324 Gene3D G3DSA:3.90.78.10 241 316 2.5E-30 T 14-09-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AY555_RS06110 d785d571328fa960749dc6d1fdfaebd8 324 SUPERFAMILY SSF56176 35 221 5.09E-44 T 14-09-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AY555_RS00420 16585913042dc157f4476eb23b9f56d8 235 SUPERFAMILY SSF52172 1 126 3.42E-31 T 14-09-2016 IPR011006 CheY-like superfamily AY555_RS00420 16585913042dc157f4476eb23b9f56d8 235 SMART SM00850 138 233 2.6E-20 T 14-09-2016 IPR007492 LytTR DNA-binding domain GO:0003677 AY555_RS00420 16585913042dc157f4476eb23b9f56d8 235 PANTHER PTHR26402 2 124 2.6E-31 T 14-09-2016 AY555_RS00420 16585913042dc157f4476eb23b9f56d8 235 Pfam PF04397 LytTr DNA-binding domain 139 232 8.5E-16 T 14-09-2016 IPR007492 LytTR DNA-binding domain GO:0003677 AY555_RS00420 16585913042dc157f4476eb23b9f56d8 235 Pfam PF00072 Response regulator receiver domain 4 112 5.0E-23 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS00420 16585913042dc157f4476eb23b9f56d8 235 SMART SM00448 2 112 3.3E-29 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS00420 16585913042dc157f4476eb23b9f56d8 235 Gene3D G3DSA:3.40.50.2300 1 123 1.6E-30 T 14-09-2016 AY555_RS00420 16585913042dc157f4476eb23b9f56d8 235 Gene3D G3DSA:2.40.50.40 132 196 1.2E-8 T 14-09-2016 AY555_RS01290 5718f348adf6d46d0b94a09e333889f6 1103 PANTHER PTHR11405 1 1090 0.0 T 14-09-2016 AY555_RS01290 5718f348adf6d46d0b94a09e333889f6 1103 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 860 867 - T 14-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AY555_RS01290 5718f348adf6d46d0b94a09e333889f6 1103 SUPERFAMILY SSF56059 684 954 8.49E-92 T 14-09-2016 AY555_RS01290 5718f348adf6d46d0b94a09e333889f6 1103 Gene3D G3DSA:3.30.1490.20 142 200 1.5E-20 T 14-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AY555_RS01290 5718f348adf6d46d0b94a09e333889f6 1103 SMART SM01096 426 548 1.8E-58 T 14-09-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AY555_RS01290 5718f348adf6d46d0b94a09e333889f6 1103 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 720 734 - T 14-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AY555_RS01290 5718f348adf6d46d0b94a09e333889f6 1103 SUPERFAMILY SSF56059 128 401 8.13E-106 T 14-09-2016 AY555_RS01290 5718f348adf6d46d0b94a09e333889f6 1103 Gene3D G3DSA:1.10.1030.10 401 537 2.1E-43 T 14-09-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AY555_RS01290 5718f348adf6d46d0b94a09e333889f6 1103 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.4E-64 T 14-09-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AY555_RS01290 5718f348adf6d46d0b94a09e333889f6 1103 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.4E-64 T 14-09-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AY555_RS01290 5718f348adf6d46d0b94a09e333889f6 1103 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 1.4E-64 T 14-09-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AY555_RS01290 5718f348adf6d46d0b94a09e333889f6 1103 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 1.4E-64 T 14-09-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AY555_RS01290 5718f348adf6d46d0b94a09e333889f6 1103 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.4E-64 T 14-09-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AY555_RS01290 5718f348adf6d46d0b94a09e333889f6 1103 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.4E-64 T 14-09-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AY555_RS01290 5718f348adf6d46d0b94a09e333889f6 1103 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.4E-64 T 14-09-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AY555_RS01290 5718f348adf6d46d0b94a09e333889f6 1103 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 14-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AY555_RS01290 5718f348adf6d46d0b94a09e333889f6 1103 Gene3D G3DSA:3.40.50.20 538 673 1.2E-51 T 14-09-2016 IPR016185 Pre-ATP-grasp domain AY555_RS01290 5718f348adf6d46d0b94a09e333889f6 1103 SUPERFAMILY SSF52335 956 1090 2.35E-35 T 14-09-2016 IPR011607 Methylglyoxal synthase-like domain AY555_RS01290 5718f348adf6d46d0b94a09e333889f6 1103 Pfam PF02142 MGS-like domain 977 1060 6.8E-14 T 14-09-2016 IPR011607 Methylglyoxal synthase-like domain AY555_RS01290 5718f348adf6d46d0b94a09e333889f6 1103 Gene3D G3DSA:3.30.470.20 769 955 8.9E-69 T 14-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AY555_RS01290 5718f348adf6d46d0b94a09e333889f6 1103 Gene3D G3DSA:3.30.470.20 201 400 4.8E-75 T 14-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AY555_RS01290 5718f348adf6d46d0b94a09e333889f6 1103 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1083 12.729 T 14-09-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AY555_RS01290 5718f348adf6d46d0b94a09e333889f6 1103 SMART SM00851 976 1062 2.1E-21 T 14-09-2016 IPR011607 Methylglyoxal synthase-like domain AY555_RS01290 5718f348adf6d46d0b94a09e333889f6 1103 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 684 896 5.1E-32 T 14-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AY555_RS01290 5718f348adf6d46d0b94a09e333889f6 1103 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.2E-66 T 14-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AY555_RS01290 5718f348adf6d46d0b94a09e333889f6 1103 Gene3D G3DSA:3.40.50.1380 959 1090 2.9E-38 T 14-09-2016 IPR011607 Methylglyoxal synthase-like domain AY555_RS01290 5718f348adf6d46d0b94a09e333889f6 1103 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1073 0.0 T 14-09-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AY555_RS01290 5718f348adf6d46d0b94a09e333889f6 1103 Gene3D G3DSA:3.30.1490.20 698 768 4.6E-17 T 14-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AY555_RS01290 5718f348adf6d46d0b94a09e333889f6 1103 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 430 548 7.8E-38 T 14-09-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AY555_RS01290 5718f348adf6d46d0b94a09e333889f6 1103 PANTHER PTHR11405:SF5 1 1090 0.0 T 14-09-2016 AY555_RS01290 5718f348adf6d46d0b94a09e333889f6 1103 SUPERFAMILY SSF48108 396 551 5.75E-44 T 14-09-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AY555_RS01290 5718f348adf6d46d0b94a09e333889f6 1103 SUPERFAMILY SSF52440 1 127 3.31E-47 T 14-09-2016 IPR016185 Pre-ATP-grasp domain AY555_RS01290 5718f348adf6d46d0b94a09e333889f6 1103 SUPERFAMILY SSF52440 565 686 4.32E-43 T 14-09-2016 IPR016185 Pre-ATP-grasp domain AY555_RS01290 5718f348adf6d46d0b94a09e333889f6 1103 Gene3D G3DSA:3.40.50.20 3 107 7.9E-44 T 14-09-2016 IPR016185 Pre-ATP-grasp domain AY555_RS09285 f948d2d40927c13faf801826528400bc 493 PANTHER PTHR13833 14 478 8.7E-121 T 14-09-2016 AY555_RS09285 f948d2d40927c13faf801826528400bc 493 SUPERFAMILY SSF101898 190 486 1.94E-31 T 14-09-2016 AY555_RS09285 f948d2d40927c13faf801826528400bc 493 Pfam PF01436 NHL repeat 234 258 3.8E-4 T 14-09-2016 IPR001258 NHL repeat GO:0005515 AY555_RS09285 f948d2d40927c13faf801826528400bc 493 SUPERFAMILY SSF52833 17 143 3.67E-28 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS09285 f948d2d40927c13faf801826528400bc 493 PANTHER PTHR13833:SF49 14 478 8.7E-121 T 14-09-2016 AY555_RS09285 f948d2d40927c13faf801826528400bc 493 Gene3D G3DSA:3.40.30.10 7 150 2.8E-37 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS09285 f948d2d40927c13faf801826528400bc 493 Gene3D G3DSA:2.120.10.30 195 482 2.5E-44 T 14-09-2016 IPR011042 Six-bladed beta-propeller, TolB-like AY555_RS09285 f948d2d40927c13faf801826528400bc 493 Pfam PF13905 Thioredoxin-like 31 125 4.9E-11 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS03000 352a09cb6c126b07e42f20a9ed85082d 310 Pfam PF12697 Alpha/beta hydrolase family 52 285 5.4E-22 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AY555_RS03000 352a09cb6c126b07e42f20a9ed85082d 310 SUPERFAMILY SSF53474 46 302 3.48E-38 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AY555_RS03000 352a09cb6c126b07e42f20a9ed85082d 310 PANTHER PTHR10992:SF733 39 302 1.5E-26 T 14-09-2016 AY555_RS03000 352a09cb6c126b07e42f20a9ed85082d 310 Gene3D G3DSA:3.40.50.1820 50 300 3.9E-34 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AY555_RS03000 352a09cb6c126b07e42f20a9ed85082d 310 PANTHER PTHR10992 39 302 1.5E-26 T 14-09-2016 AY555_RS00835 f368b904f237ff552385b634f5c09e76 469 Pfam PF13365 Trypsin-like peptidase domain 93 229 5.8E-34 T 14-09-2016 AY555_RS00835 f368b904f237ff552385b634f5c09e76 469 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 36 464 2.5E-137 T 14-09-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 AY555_RS00835 f368b904f237ff552385b634f5c09e76 469 PANTHER PTHR22939 29 363 7.9E-119 T 14-09-2016 AY555_RS00835 f368b904f237ff552385b634f5c09e76 469 SUPERFAMILY SSF50156 219 245 3.29E-23 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AY555_RS00835 f368b904f237ff552385b634f5c09e76 469 SUPERFAMILY SSF50156 285 365 3.29E-23 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AY555_RS00835 f368b904f237ff552385b634f5c09e76 469 PANTHER PTHR22939:SF93 29 363 7.9E-119 T 14-09-2016 AY555_RS00835 f368b904f237ff552385b634f5c09e76 469 Gene3D G3DSA:2.40.10.10 157 269 8.9E-40 T 14-09-2016 AY555_RS00835 f368b904f237ff552385b634f5c09e76 469 SUPERFAMILY SSF50156 379 468 3.15E-13 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AY555_RS00835 f368b904f237ff552385b634f5c09e76 469 Pfam PF13180 PDZ domain 290 355 1.6E-13 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AY555_RS00835 f368b904f237ff552385b634f5c09e76 469 SMART SM00228 270 350 2.4E-13 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AY555_RS00835 f368b904f237ff552385b634f5c09e76 469 SMART SM00228 379 461 0.0041 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AY555_RS00835 f368b904f237ff552385b634f5c09e76 469 SUPERFAMILY SSF50494 8 55 2.88E-60 T 14-09-2016 IPR009003 Peptidase S1, PA clan AY555_RS00835 f368b904f237ff552385b634f5c09e76 469 SUPERFAMILY SSF50494 90 273 2.88E-60 T 14-09-2016 IPR009003 Peptidase S1, PA clan AY555_RS00835 f368b904f237ff552385b634f5c09e76 469 PRINTS PR00834 HtrA/DegQ protease family signature 165 189 2.7E-54 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AY555_RS00835 f368b904f237ff552385b634f5c09e76 469 PRINTS PR00834 HtrA/DegQ protease family signature 308 320 2.7E-54 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AY555_RS00835 f368b904f237ff552385b634f5c09e76 469 PRINTS PR00834 HtrA/DegQ protease family signature 123 143 2.7E-54 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AY555_RS00835 f368b904f237ff552385b634f5c09e76 469 PRINTS PR00834 HtrA/DegQ protease family signature 200 217 2.7E-54 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AY555_RS00835 f368b904f237ff552385b634f5c09e76 469 PRINTS PR00834 HtrA/DegQ protease family signature 222 239 2.7E-54 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AY555_RS00835 f368b904f237ff552385b634f5c09e76 469 PRINTS PR00834 HtrA/DegQ protease family signature 102 114 2.7E-54 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AY555_RS00835 f368b904f237ff552385b634f5c09e76 469 Gene3D G3DSA:2.40.10.10 35 156 1.0E-33 T 14-09-2016 AY555_RS00835 f368b904f237ff552385b634f5c09e76 469 Gene3D G3DSA:2.30.42.10 382 468 2.6E-13 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AY555_RS00835 f368b904f237ff552385b634f5c09e76 469 Gene3D G3DSA:2.30.42.10 270 364 3.9E-25 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AY555_RS06730 ff715352538f404df85e7e92004c919a 360 SUPERFAMILY SSF55326 10 173 3.59E-47 T 14-09-2016 AY555_RS06730 ff715352538f404df85e7e92004c919a 360 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 10 351 44.264 T 14-09-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AY555_RS06730 ff715352538f404df85e7e92004c919a 360 Gene3D G3DSA:3.30.1330.10 25 173 1.1E-58 T 14-09-2016 IPR016188 PurM-like, N-terminal domain AY555_RS06730 ff715352538f404df85e7e92004c919a 360 Pfam PF02769 AIR synthase related protein, C-terminal domain 180 343 2.1E-33 T 14-09-2016 IPR010918 AIR synthase-related protein, C-terminal domain AY555_RS06730 ff715352538f404df85e7e92004c919a 360 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 10 341 8.7E-130 T 14-09-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AY555_RS06730 ff715352538f404df85e7e92004c919a 360 Gene3D G3DSA:3.90.650.10 176 346 1.9E-66 T 14-09-2016 IPR010918 AIR synthase-related protein, C-terminal domain AY555_RS06730 ff715352538f404df85e7e92004c919a 360 PANTHER PTHR10520 10 359 3.7E-202 T 14-09-2016 AY555_RS06730 ff715352538f404df85e7e92004c919a 360 Pfam PF00586 AIR synthase related protein, N-terminal domain 81 167 7.1E-15 T 14-09-2016 IPR016188 PurM-like, N-terminal domain AY555_RS06730 ff715352538f404df85e7e92004c919a 360 SUPERFAMILY SSF56042 175 345 1.94E-58 T 14-09-2016 IPR010918 AIR synthase-related protein, C-terminal domain AY555_RS01980 89ae0b7c51ae60a1884f5c75cb5845c2 382 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 14-09-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 AY555_RS01980 89ae0b7c51ae60a1884f5c75cb5845c2 382 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 1.4E-33 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AY555_RS01980 89ae0b7c51ae60a1884f5c75cb5845c2 382 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 1.4E-33 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AY555_RS01980 89ae0b7c51ae60a1884f5c75cb5845c2 382 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 1.4E-33 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AY555_RS01980 89ae0b7c51ae60a1884f5c75cb5845c2 382 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 1.4E-33 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AY555_RS01980 89ae0b7c51ae60a1884f5c75cb5845c2 382 SUPERFAMILY SSF52540 152 331 4.39E-49 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS01980 89ae0b7c51ae60a1884f5c75cb5845c2 382 PIRSF PIRSF002401 1 351 4.0E-129 T 14-09-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AY555_RS01980 89ae0b7c51ae60a1884f5c75cb5845c2 382 PANTHER PTHR11702:SF3 1 381 1.7E-148 T 14-09-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AY555_RS01980 89ae0b7c51ae60a1884f5c75cb5845c2 382 Pfam PF01926 50S ribosome-binding GTPase 161 280 2.3E-25 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AY555_RS01980 89ae0b7c51ae60a1884f5c75cb5845c2 382 PANTHER PTHR11702 1 381 1.7E-148 T 14-09-2016 AY555_RS01980 89ae0b7c51ae60a1884f5c75cb5845c2 382 Hamap MF_01454 GTPase Obg [obg]. 2 327 45.965 T 14-09-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AY555_RS01980 89ae0b7c51ae60a1884f5c75cb5845c2 382 Gene3D G3DSA:2.70.210.12 2 155 3.3E-58 T 14-09-2016 IPR006169 GTP1/OBG domain GO:0005525 AY555_RS01980 89ae0b7c51ae60a1884f5c75cb5845c2 382 SUPERFAMILY SSF82051 2 158 3.4E-55 T 14-09-2016 IPR006169 GTP1/OBG domain GO:0005525 AY555_RS01980 89ae0b7c51ae60a1884f5c75cb5845c2 382 Pfam PF01018 GTP1/OBG 3 158 5.7E-61 T 14-09-2016 IPR006169 GTP1/OBG domain GO:0005525 AY555_RS01980 89ae0b7c51ae60a1884f5c75cb5845c2 382 Gene3D G3DSA:3.40.50.300 160 331 4.6E-49 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS01980 89ae0b7c51ae60a1884f5c75cb5845c2 382 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 325 1.1E-135 T 14-09-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AY555_RS04235 c5f8344f9be54f033fb8f8c92d0b8bc6 761 ProSitePatterns PS00331 Malic enzymes signature. 167 183 - T 14-09-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 AY555_RS04235 c5f8344f9be54f033fb8f8c92d0b8bc6 761 SUPERFAMILY SSF53659 438 757 1.15E-82 T 14-09-2016 AY555_RS04235 c5f8344f9be54f033fb8f8c92d0b8bc6 761 PIRSF PIRSF036684 6 761 0.0 T 14-09-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 AY555_RS04235 c5f8344f9be54f033fb8f8c92d0b8bc6 761 Gene3D G3DSA:3.40.50.10750 584 731 3.7E-47 T 14-09-2016 AY555_RS04235 c5f8344f9be54f033fb8f8c92d0b8bc6 761 SMART SM00919 171 408 8.5E-141 T 14-09-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 AY555_RS04235 c5f8344f9be54f033fb8f8c92d0b8bc6 761 SUPERFAMILY SSF53223 18 169 3.31E-54 T 14-09-2016 AY555_RS04235 c5f8344f9be54f033fb8f8c92d0b8bc6 761 Pfam PF03949 Malic enzyme, NAD binding domain 173 368 2.2E-22 T 14-09-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 AY555_RS04235 c5f8344f9be54f033fb8f8c92d0b8bc6 761 PANTHER PTHR23406:SF23 380 450 1.1E-167 T 14-09-2016 AY555_RS04235 c5f8344f9be54f033fb8f8c92d0b8bc6 761 Gene3D G3DSA:3.40.50.720 169 456 3.2E-87 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS04235 c5f8344f9be54f033fb8f8c92d0b8bc6 761 Pfam PF00390 Malic enzyme, N-terminal domain 27 159 1.1E-27 T 14-09-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AY555_RS04235 c5f8344f9be54f033fb8f8c92d0b8bc6 761 SUPERFAMILY SSF51735 171 460 1.81E-85 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS04235 c5f8344f9be54f033fb8f8c92d0b8bc6 761 PANTHER PTHR23406 380 450 1.1E-167 T 14-09-2016 AY555_RS04235 c5f8344f9be54f033fb8f8c92d0b8bc6 761 PANTHER PTHR23406 39 363 1.1E-167 T 14-09-2016 AY555_RS04235 c5f8344f9be54f033fb8f8c92d0b8bc6 761 SMART SM01274 26 159 2.6E-82 T 14-09-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AY555_RS04235 c5f8344f9be54f033fb8f8c92d0b8bc6 761 PANTHER PTHR23406:SF23 39 363 1.1E-167 T 14-09-2016 AY555_RS04235 c5f8344f9be54f033fb8f8c92d0b8bc6 761 Pfam PF01515 Phosphate acetyl/butaryl transferase 438 755 2.3E-79 T 14-09-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 AY555_RS04235 c5f8344f9be54f033fb8f8c92d0b8bc6 761 Gene3D G3DSA:3.40.50.10380 15 168 1.2E-51 T 14-09-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AY555_RS07505 1dc124710ec1be49af13b1ec10f341b2 288 SUPERFAMILY SSF74653 195 284 2.49E-7 T 14-09-2016 AY555_RS07505 1dc124710ec1be49af13b1ec10f341b2 288 Gene3D G3DSA:3.30.1150.10 179 285 1.6E-11 T 14-09-2016 AY555_RS00350 47b59ec588f0e4544a0544bfb8a188e4 435 TIGRFAM TIGR00814 stp: serine transporter 22 424 1.5E-161 T 14-09-2016 IPR004694 Hydroxy amino acid transporter GO:0005215|GO:0006810|GO:0016021 AY555_RS00350 47b59ec588f0e4544a0544bfb8a188e4 435 PANTHER PTHR35334:SF2 1 435 9.0E-241 T 14-09-2016 AY555_RS00350 47b59ec588f0e4544a0544bfb8a188e4 435 PANTHER PTHR35334 1 435 9.0E-241 T 14-09-2016 AY555_RS08495 428d6a29209cb372b816501cd20d4ad8 522 Pfam PF00494 Squalene/phytoene synthase 11 233 1.4E-28 T 14-09-2016 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 AY555_RS08495 428d6a29209cb372b816501cd20d4ad8 522 Pfam PF00494 Squalene/phytoene synthase 271 503 5.0E-43 T 14-09-2016 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 AY555_RS08495 428d6a29209cb372b816501cd20d4ad8 522 PANTHER PTHR31480 270 442 7.6E-35 T 14-09-2016 AY555_RS08495 428d6a29209cb372b816501cd20d4ad8 522 SUPERFAMILY SSF48576 12 256 7.91E-38 T 14-09-2016 IPR008949 Isoprenoid synthase domain AY555_RS08495 428d6a29209cb372b816501cd20d4ad8 522 Gene3D G3DSA:1.10.600.10 258 498 3.3E-48 T 14-09-2016 IPR008949 Isoprenoid synthase domain AY555_RS08495 428d6a29209cb372b816501cd20d4ad8 522 Gene3D G3DSA:1.10.600.10 17 64 1.4E-5 T 14-09-2016 IPR008949 Isoprenoid synthase domain AY555_RS08495 428d6a29209cb372b816501cd20d4ad8 522 Gene3D G3DSA:1.10.600.10 71 237 2.1E-22 T 14-09-2016 IPR008949 Isoprenoid synthase domain AY555_RS08495 428d6a29209cb372b816501cd20d4ad8 522 SUPERFAMILY SSF48576 264 519 6.19E-44 T 14-09-2016 IPR008949 Isoprenoid synthase domain AY555_RS08495 428d6a29209cb372b816501cd20d4ad8 522 PANTHER PTHR31480:SF5 270 442 7.6E-35 T 14-09-2016 AY555_RS02290 f46d541b853c7317aa12186ec4d0acd4 563 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 97 552 3.2E-126 T 14-09-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AY555_RS02290 f46d541b853c7317aa12186ec4d0acd4 563 PANTHER PTHR30047 21 556 2.6E-182 T 14-09-2016 AY555_RS02290 f46d541b853c7317aa12186ec4d0acd4 563 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 57 551 7.4E-160 T 14-09-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AY555_RS02290 f46d541b853c7317aa12186ec4d0acd4 563 PANTHER PTHR30047:SF2 21 556 2.6E-182 T 14-09-2016 AY555_RS03690 ffa359d4d357a712b8e73d4d1ab32080 194 SMART SM00463 106 190 7.6E-8 T 14-09-2016 IPR002625 Smr domain AY555_RS03690 ffa359d4d357a712b8e73d4d1ab32080 194 Pfam PF01713 Smr domain 109 190 5.8E-24 T 14-09-2016 IPR002625 Smr domain AY555_RS03690 ffa359d4d357a712b8e73d4d1ab32080 194 PANTHER PTHR35562 3 194 5.9E-35 T 14-09-2016 AY555_RS03690 ffa359d4d357a712b8e73d4d1ab32080 194 PANTHER PTHR35562:SF2 3 194 5.9E-35 T 14-09-2016 AY555_RS03690 ffa359d4d357a712b8e73d4d1ab32080 194 SUPERFAMILY SSF160443 107 190 5.36E-16 T 14-09-2016 IPR002625 Smr domain AY555_RS00695 26b6ce2241cdb1e9260aae64d1a35d29 171 SUPERFAMILY SSF46565 114 170 3.01E-13 T 14-09-2016 IPR001623 DnaJ domain AY555_RS00695 26b6ce2241cdb1e9260aae64d1a35d29 171 Gene3D G3DSA:1.10.287.110 114 169 3.4E-14 T 14-09-2016 IPR001623 DnaJ domain AY555_RS00695 26b6ce2241cdb1e9260aae64d1a35d29 171 PANTHER PTHR12763 116 170 3.0E-14 T 14-09-2016 AY555_RS00695 26b6ce2241cdb1e9260aae64d1a35d29 171 PANTHER PTHR12763:SF28 116 170 3.0E-14 T 14-09-2016 AY555_RS08705 5a3e0cf8787ce069541d9cf09ece8eec 505 Pfam PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus 68 128 7.1E-6 T 14-09-2016 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal GO:0006120|GO:0055114 KEGG: 00190+1.6.5.3|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-5083|MetaCyc: PWY-6692 AY555_RS08705 5a3e0cf8787ce069541d9cf09ece8eec 505 PANTHER PTHR22773:SF40 1 491 3.3E-214 T 14-09-2016 AY555_RS08705 5a3e0cf8787ce069541d9cf09ece8eec 505 PANTHER PTHR22773 1 491 3.3E-214 T 14-09-2016 AY555_RS08705 5a3e0cf8787ce069541d9cf09ece8eec 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 239 263 7.3E-49 T 14-09-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 AY555_RS08705 5a3e0cf8787ce069541d9cf09ece8eec 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 379 405 7.3E-49 T 14-09-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 AY555_RS08705 5a3e0cf8787ce069541d9cf09ece8eec 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 140 159 7.3E-49 T 14-09-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 AY555_RS08705 5a3e0cf8787ce069541d9cf09ece8eec 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 327 346 7.3E-49 T 14-09-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 AY555_RS08705 5a3e0cf8787ce069541d9cf09ece8eec 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 170 194 7.3E-49 T 14-09-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 AY555_RS08705 5a3e0cf8787ce069541d9cf09ece8eec 505 Pfam PF00361 Proton-conducting membrane transporter 134 418 1.1E-87 T 14-09-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 AY555_RS08705 5a3e0cf8787ce069541d9cf09ece8eec 505 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 7 487 4.0E-195 T 14-09-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 AY555_RS06205 c9f80ff71548858018c997a9fd0ef2f1 243 PANTHER PTHR24220 3 240 1.6E-135 T 14-09-2016 AY555_RS06205 c9f80ff71548858018c997a9fd0ef2f1 243 SUPERFAMILY SSF52540 1 241 5.71E-82 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS06205 c9f80ff71548858018c997a9fd0ef2f1 243 Gene3D G3DSA:3.40.50.300 1 242 7.1E-84 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS06205 c9f80ff71548858018c997a9fd0ef2f1 243 Pfam PF00005 ABC transporter 23 171 3.2E-33 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AY555_RS06205 c9f80ff71548858018c997a9fd0ef2f1 243 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AY555_RS06205 c9f80ff71548858018c997a9fd0ef2f1 243 SMART SM00382 32 220 9.4E-15 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS06205 c9f80ff71548858018c997a9fd0ef2f1 243 PANTHER PTHR24220:SF455 3 240 1.6E-135 T 14-09-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 AY555_RS08245 d5ff49c4a6ed612316554c47411892b8 274 Pfam PF12706 Beta-lactamase superfamily domain 40 239 2.9E-26 T 14-09-2016 IPR001279 Metallo-beta-lactamase AY555_RS08245 d5ff49c4a6ed612316554c47411892b8 274 PANTHER PTHR12553:SF29 1 273 1.6E-79 T 14-09-2016 AY555_RS08245 d5ff49c4a6ed612316554c47411892b8 274 PANTHER PTHR12553 1 273 1.6E-79 T 14-09-2016 AY555_RS08245 d5ff49c4a6ed612316554c47411892b8 274 SUPERFAMILY SSF56281 4 271 6.68E-48 T 14-09-2016 IPR001279 Metallo-beta-lactamase AY555_RS08245 d5ff49c4a6ed612316554c47411892b8 274 SMART SM00849 27 216 0.0015 T 14-09-2016 IPR001279 Metallo-beta-lactamase AY555_RS08245 d5ff49c4a6ed612316554c47411892b8 274 Gene3D G3DSA:3.60.15.10 4 273 1.0E-44 T 14-09-2016 IPR001279 Metallo-beta-lactamase AY555_RS04160 17adee175e2553287903c5849f07577c 157 PANTHER PTHR33540 9 134 2.2E-34 T 14-09-2016 AY555_RS04160 17adee175e2553287903c5849f07577c 157 PANTHER PTHR33540:SF2 9 134 2.2E-34 T 14-09-2016 AY555_RS04160 17adee175e2553287903c5849f07577c 157 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 12 131 2.0E-32 T 14-09-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AY555_RS04160 17adee175e2553287903c5849f07577c 157 Gene3D G3DSA:3.40.50.300 9 145 6.8E-41 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04160 17adee175e2553287903c5849f07577c 157 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 11 138 1.2E-27 T 14-09-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AY555_RS04160 17adee175e2553287903c5849f07577c 157 SUPERFAMILY SSF52540 28 134 8.92E-17 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS02455 25d20d971347a9ffeac7058cb24fee65 232 PANTHER PTHR24220 2 220 4.1E-93 T 14-09-2016 AY555_RS02455 25d20d971347a9ffeac7058cb24fee65 232 SMART SM00382 26 213 9.3E-9 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS02455 25d20d971347a9ffeac7058cb24fee65 232 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AY555_RS02455 25d20d971347a9ffeac7058cb24fee65 232 PANTHER PTHR24220:SF470 2 220 4.1E-93 T 14-09-2016 AY555_RS02455 25d20d971347a9ffeac7058cb24fee65 232 Pfam PF00005 ABC transporter 17 164 2.1E-29 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AY555_RS02455 25d20d971347a9ffeac7058cb24fee65 232 Gene3D G3DSA:3.40.50.300 1 229 1.9E-61 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS02455 25d20d971347a9ffeac7058cb24fee65 232 SUPERFAMILY SSF52540 2 224 2.32E-60 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04910 3c542e21dcccdde8414ef2378f149bda 367 Gene3D G3DSA:3.10.20.30 270 367 1.7E-44 T 14-09-2016 IPR012675 Beta-grasp domain AY555_RS04910 3c542e21dcccdde8414ef2378f149bda 367 Gene3D G3DSA:1.10.150.300 132 202 7.8E-24 T 14-09-2016 IPR023192 TGS-like domain AY555_RS04910 3c542e21dcccdde8414ef2378f149bda 367 PANTHER PTHR23305 1 367 3.4E-196 T 14-09-2016 AY555_RS04910 3c542e21dcccdde8414ef2378f149bda 367 Gene3D G3DSA:3.40.50.300 203 269 6.2E-44 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04910 3c542e21dcccdde8414ef2378f149bda 367 Gene3D G3DSA:3.40.50.300 4 131 6.2E-44 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04910 3c542e21dcccdde8414ef2378f149bda 367 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 367 4.6E-146 T 14-09-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 AY555_RS04910 3c542e21dcccdde8414ef2378f149bda 367 Pfam PF06071 Protein of unknown function (DUF933) 283 366 2.0E-37 T 14-09-2016 IPR013029 Domain of unknown function DUF933 AY555_RS04910 3c542e21dcccdde8414ef2378f149bda 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.2E-34 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AY555_RS04910 3c542e21dcccdde8414ef2378f149bda 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 2.2E-34 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AY555_RS04910 3c542e21dcccdde8414ef2378f149bda 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 71 86 2.2E-34 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AY555_RS04910 3c542e21dcccdde8414ef2378f149bda 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 88 106 2.2E-34 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AY555_RS04910 3c542e21dcccdde8414ef2378f149bda 367 PANTHER PTHR23305:SF12 1 367 3.4E-196 T 14-09-2016 AY555_RS04910 3c542e21dcccdde8414ef2378f149bda 367 SUPERFAMILY SSF52540 3 304 4.73E-78 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04910 3c542e21dcccdde8414ef2378f149bda 367 PIRSF PIRSF006641 1 367 1.8E-151 T 14-09-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 AY555_RS04910 3c542e21dcccdde8414ef2378f149bda 367 Pfam PF01926 50S ribosome-binding GTPase 5 123 8.8E-24 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AY555_RS04910 3c542e21dcccdde8414ef2378f149bda 367 SUPERFAMILY SSF81271 283 363 1.37E-33 T 14-09-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AY555_RS04910 3c542e21dcccdde8414ef2378f149bda 367 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 367 43.442 T 14-09-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 AY555_RS07215 ea303050185010abbda0245f7a558ff6 293 PANTHER PTHR42194:SF1 8 290 4.3E-47 T 14-09-2016 AY555_RS07215 ea303050185010abbda0245f7a558ff6 293 Gene3D G3DSA:3.20.20.150 11 286 1.9E-82 T 14-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AY555_RS07215 ea303050185010abbda0245f7a558ff6 293 PANTHER PTHR42194 8 290 4.3E-47 T 14-09-2016 AY555_RS07215 ea303050185010abbda0245f7a558ff6 293 Pfam PF05114 Protein of unknown function (DUF692) 14 282 1.2E-83 T 14-09-2016 IPR007801 Uncharacterised protein family UPF0276 AY555_RS08585 518adca9fb43cb61176a28a82b8dbe63 171 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 5 165 33.609 T 14-09-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 AY555_RS08585 518adca9fb43cb61176a28a82b8dbe63 171 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 7 62 1.5E-17 T 14-09-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AY555_RS08585 518adca9fb43cb61176a28a82b8dbe63 171 Gene3D G3DSA:3.40.50.620 5 164 1.3E-48 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS08585 518adca9fb43cb61176a28a82b8dbe63 171 Pfam PF01467 Cytidylyltransferase-like 8 138 3.1E-18 T 14-09-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AY555_RS08585 518adca9fb43cb61176a28a82b8dbe63 171 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 23 44 1.9E-34 T 14-09-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 AY555_RS08585 518adca9fb43cb61176a28a82b8dbe63 171 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 92 108 1.9E-34 T 14-09-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 AY555_RS08585 518adca9fb43cb61176a28a82b8dbe63 171 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 5 23 1.9E-34 T 14-09-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 AY555_RS08585 518adca9fb43cb61176a28a82b8dbe63 171 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 119 141 1.9E-34 T 14-09-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 AY555_RS08585 518adca9fb43cb61176a28a82b8dbe63 171 PANTHER PTHR21342:SF1 5 168 7.3E-66 T 14-09-2016 AY555_RS08585 518adca9fb43cb61176a28a82b8dbe63 171 PANTHER PTHR21342 5 168 7.3E-66 T 14-09-2016 AY555_RS08585 518adca9fb43cb61176a28a82b8dbe63 171 SUPERFAMILY SSF52374 5 164 5.63E-39 T 14-09-2016 AY555_RS08585 518adca9fb43cb61176a28a82b8dbe63 171 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 7 164 6.6E-56 T 14-09-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 AY555_RS09915 8ffb98cde112a8eb0cc365f47dffaa22 440 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 141 161 - T 14-09-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 AY555_RS09915 8ffb98cde112a8eb0cc365f47dffaa22 440 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 7 435 5.5E-172 T 14-09-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 AY555_RS09915 8ffb98cde112a8eb0cc365f47dffaa22 440 SUPERFAMILY SSF102114 122 367 1.11E-51 T 14-09-2016 AY555_RS09915 8ffb98cde112a8eb0cc365f47dffaa22 440 SMART SM00729 137 362 6.5E-55 T 14-09-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AY555_RS09915 8ffb98cde112a8eb0cc365f47dffaa22 440 PANTHER PTHR11918:SF57 6 440 6.5E-224 T 14-09-2016 AY555_RS09915 8ffb98cde112a8eb0cc365f47dffaa22 440 PANTHER PTHR11918 6 440 6.5E-224 T 14-09-2016 IPR023970 Methylthiotransferase/radical SAM-type protein AY555_RS09915 8ffb98cde112a8eb0cc365f47dffaa22 440 Gene3D G3DSA:3.80.30.20 135 373 2.5E-71 T 14-09-2016 IPR023404 Radical SAM, alpha/beta horseshoe AY555_RS09915 8ffb98cde112a8eb0cc365f47dffaa22 440 Pfam PF00919 Uncharacterized protein family UPF0004 7 95 5.3E-20 T 14-09-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 AY555_RS09915 8ffb98cde112a8eb0cc365f47dffaa22 440 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 8 435 9.4E-101 T 14-09-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 AY555_RS09915 8ffb98cde112a8eb0cc365f47dffaa22 440 Gene3D G3DSA:2.40.50.140 378 438 5.2E-24 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS09915 8ffb98cde112a8eb0cc365f47dffaa22 440 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 6 437 59.416 T 14-09-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 AY555_RS09915 8ffb98cde112a8eb0cc365f47dffaa22 440 Pfam PF04055 Radical SAM superfamily 143 320 1.3E-27 T 14-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AY555_RS02620 ca2e4ee9411eba49341839c0bf0196e5 400 Pfam PF12323 Helix-turn-helix domain 1 45 1.7E-13 T 14-09-2016 IPR021027 Transposase, putative, helix-turn-helix domain AY555_RS02620 ca2e4ee9411eba49341839c0bf0196e5 400 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 247 319 2.8E-11 T 14-09-2016 IPR010095 Transposase IS605, OrfB, C-terminal AY555_RS02620 ca2e4ee9411eba49341839c0bf0196e5 400 Pfam PF01385 Probable transposase 166 278 1.8E-30 T 14-09-2016 IPR001959 Probable transposase, IS891/IS1136/IS1341 AY555_RS02620 ca2e4ee9411eba49341839c0bf0196e5 400 Pfam PF07282 Putative transposase DNA-binding domain 292 361 2.9E-23 T 14-09-2016 IPR010095 Transposase IS605, OrfB, C-terminal AY555_RS02620 ca2e4ee9411eba49341839c0bf0196e5 400 PANTHER PTHR30405 1 374 5.6E-113 T 14-09-2016 AY555_RS02620 ca2e4ee9411eba49341839c0bf0196e5 400 PANTHER PTHR30405:SF5 1 374 5.6E-113 T 14-09-2016 AY555_RS09155 835eba2079850b7443db0833172590f0 378 PANTHER PTHR32039:SF8 21 374 2.6E-107 T 14-09-2016 AY555_RS09155 835eba2079850b7443db0833172590f0 378 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 79 289 4.0E-68 T 14-09-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 AY555_RS09155 835eba2079850b7443db0833172590f0 378 Gene3D G3DSA:3.40.50.450 119 262 1.7E-8 T 14-09-2016 AY555_RS09155 835eba2079850b7443db0833172590f0 378 SUPERFAMILY SSF102405 90 292 1.72E-39 T 14-09-2016 AY555_RS09155 835eba2079850b7443db0833172590f0 378 Pfam PF02481 DNA recombination-mediator protein A 80 283 1.2E-72 T 14-09-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 AY555_RS09155 835eba2079850b7443db0833172590f0 378 PANTHER PTHR32039 21 374 2.6E-107 T 14-09-2016 AY555_RS06635 b54b6a441a32895dbf8115594bf32f77 136 PANTHER PTHR11717 1 126 9.5E-26 T 14-09-2016 AY555_RS06635 b54b6a441a32895dbf8115594bf32f77 136 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 2 123 3.2E-12 T 14-09-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily AY555_RS06635 b54b6a441a32895dbf8115594bf32f77 136 SMART SM00226 2 128 3.5E-14 T 14-09-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily AY555_RS06635 b54b6a441a32895dbf8115594bf32f77 136 PANTHER PTHR11717:SF18 1 126 9.5E-26 T 14-09-2016 AY555_RS06635 b54b6a441a32895dbf8115594bf32f77 136 SUPERFAMILY SSF52788 2 126 1.57E-29 T 14-09-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily AY555_RS06635 b54b6a441a32895dbf8115594bf32f77 136 Gene3D G3DSA:3.40.50.270 2 125 2.3E-25 T 14-09-2016 AY555_RS01560 75f16bab74c92270951179f89bd70b00 629 SUPERFAMILY SSF46600 209 261 4.32E-12 T 14-09-2016 IPR001943 UVR domain GO:0005515 AY555_RS01560 75f16bab74c92270951179f89bd70b00 629 Hamap MF_00203 UvrABC system protein C [uvrC]. 22 624 26.492 T 14-09-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 AY555_RS01560 75f16bab74c92270951179f89bd70b00 629 Gene3D G3DSA:4.10.860.10 202 261 3.1E-15 T 14-09-2016 IPR001943 UVR domain GO:0005515 AY555_RS01560 75f16bab74c92270951179f89bd70b00 629 Gene3D G3DSA:3.40.1440.10 36 115 2.0E-8 T 14-09-2016 IPR027299 GIY-YIG domain AY555_RS01560 75f16bab74c92270951179f89bd70b00 629 SUPERFAMILY SSF82771 35 118 2.88E-19 T 14-09-2016 IPR000305 GIY-YIG nuclease superfamily AY555_RS01560 75f16bab74c92270951179f89bd70b00 629 Pfam PF14520 Helix-hairpin-helix domain 575 621 6.8E-8 T 14-09-2016 AY555_RS01560 75f16bab74c92270951179f89bd70b00 629 SMART SM00465 35 116 2.7E-18 T 14-09-2016 IPR000305 GIY-YIG nuclease superfamily AY555_RS01560 75f16bab74c92270951179f89bd70b00 629 PANTHER PTHR30562 1 625 2.5E-235 T 14-09-2016 AY555_RS01560 75f16bab74c92270951179f89bd70b00 629 Pfam PF02151 UvrB/uvrC motif 224 256 2.1E-8 T 14-09-2016 IPR001943 UVR domain GO:0005515 AY555_RS01560 75f16bab74c92270951179f89bd70b00 629 SMART SM00278 605 624 5.5 T 14-09-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AY555_RS01560 75f16bab74c92270951179f89bd70b00 629 SMART SM00278 573 592 1.7 T 14-09-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AY555_RS01560 75f16bab74c92270951179f89bd70b00 629 Gene3D G3DSA:1.10.150.20 572 626 3.5E-20 T 14-09-2016 AY555_RS01560 75f16bab74c92270951179f89bd70b00 629 SUPERFAMILY SSF47781 527 626 1.43E-20 T 14-09-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 AY555_RS01560 75f16bab74c92270951179f89bd70b00 629 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 400 558 1.4E-46 T 14-09-2016 IPR001162 UvrC family homology region AY555_RS01560 75f16bab74c92270951179f89bd70b00 629 Pfam PF01541 GIY-YIG catalytic domain 37 109 1.6E-6 T 14-09-2016 IPR000305 GIY-YIG nuclease superfamily AY555_RS01560 75f16bab74c92270951179f89bd70b00 629 PANTHER PTHR30562:SF1 1 625 2.5E-235 T 14-09-2016 AY555_RS01560 75f16bab74c92270951179f89bd70b00 629 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 28 603 8.3E-159 T 14-09-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 AY555_RS02970 d971b334c950e2c4c0abe64c600421d5 250 PANTHER PTHR35936:SF3 5 250 6.0E-26 T 14-09-2016 AY555_RS02970 d971b334c950e2c4c0abe64c600421d5 250 PANTHER PTHR35936 5 250 6.0E-26 T 14-09-2016 AY555_RS02970 d971b334c950e2c4c0abe64c600421d5 250 Gene3D G3DSA:3.40.190.10 205 246 2.3E-9 T 14-09-2016 AY555_RS02970 d971b334c950e2c4c0abe64c600421d5 250 Gene3D G3DSA:3.40.190.10 29 109 2.3E-9 T 14-09-2016 AY555_RS02970 d971b334c950e2c4c0abe64c600421d5 250 SUPERFAMILY SSF53850 24 245 1.85E-25 T 14-09-2016 AY555_RS02970 d971b334c950e2c4c0abe64c600421d5 250 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 246 1.5E-14 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AY555_RS07615 48a3d5c0d34fb2dd5629de4f8273b817 382 Gene3D G3DSA:3.40.50.1770 2 194 1.4E-64 T 14-09-2016 AY555_RS07615 48a3d5c0d34fb2dd5629de4f8273b817 382 SUPERFAMILY SSF51735 144 319 3.21E-38 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS07615 48a3d5c0d34fb2dd5629de4f8273b817 382 SMART SM01002 153 319 2.8E-80 T 14-09-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AY555_RS07615 48a3d5c0d34fb2dd5629de4f8273b817 382 PANTHER PTHR10160 1 379 6.9E-163 T 14-09-2016 AY555_RS07615 48a3d5c0d34fb2dd5629de4f8273b817 382 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 5 144 5.3E-42 T 14-09-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AY555_RS07615 48a3d5c0d34fb2dd5629de4f8273b817 382 SUPERFAMILY SSF52283 1 175 1.11E-51 T 14-09-2016 AY555_RS07615 48a3d5c0d34fb2dd5629de4f8273b817 382 SMART SM01003 4 144 1.7E-62 T 14-09-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AY555_RS07615 48a3d5c0d34fb2dd5629de4f8273b817 382 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 14-09-2016 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 AY555_RS07615 48a3d5c0d34fb2dd5629de4f8273b817 382 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 148 376 4.0E-68 T 14-09-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AY555_RS07615 48a3d5c0d34fb2dd5629de4f8273b817 382 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 177 202 - T 14-09-2016 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 AY555_RS07615 48a3d5c0d34fb2dd5629de4f8273b817 382 PANTHER PTHR10160:SF19 1 379 6.9E-163 T 14-09-2016 AY555_RS07615 48a3d5c0d34fb2dd5629de4f8273b817 382 Gene3D G3DSA:3.40.50.1770 195 377 8.3E-37 T 14-09-2016 AY555_RS06710 2d690770df9e76e28501ff48972af71e 704 Gene3D G3DSA:3.30.870.10 317 495 1.4E-75 T 14-09-2016 AY555_RS06710 2d690770df9e76e28501ff48972af71e 704 PANTHER PTHR30218 1 703 0.0 T 14-09-2016 AY555_RS06710 2d690770df9e76e28501ff48972af71e 704 Pfam PF13090 Polyphosphate kinase C-terminal domain 326 677 2.7E-151 T 14-09-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 AY555_RS06710 2d690770df9e76e28501ff48972af71e 704 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 8 679 6.9E-286 T 14-09-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AY555_RS06710 2d690770df9e76e28501ff48972af71e 704 Pfam PF02503 Polyphosphate kinase middle domain 124 316 1.3E-53 T 14-09-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 AY555_RS06710 2d690770df9e76e28501ff48972af71e 704 SUPERFAMILY SSF56024 315 493 4.32E-55 T 14-09-2016 AY555_RS06710 2d690770df9e76e28501ff48972af71e 704 SUPERFAMILY SSF56024 496 678 1.26E-66 T 14-09-2016 AY555_RS06710 2d690770df9e76e28501ff48972af71e 704 PANTHER PTHR30218:SF0 1 703 0.0 T 14-09-2016 AY555_RS06710 2d690770df9e76e28501ff48972af71e 704 Gene3D G3DSA:3.30.870.10 496 678 4.3E-69 T 14-09-2016 AY555_RS06710 2d690770df9e76e28501ff48972af71e 704 SUPERFAMILY SSF143724 111 308 2.16E-57 T 14-09-2016 AY555_RS06710 2d690770df9e76e28501ff48972af71e 704 Gene3D G3DSA:3.30.1840.10 110 294 1.5E-55 T 14-09-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 AY555_RS06710 2d690770df9e76e28501ff48972af71e 704 Hamap MF_00347 Polyphosphate kinase [ppk]. 6 681 31.311 T 14-09-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AY555_RS06710 2d690770df9e76e28501ff48972af71e 704 PIRSF PIRSF015589 1 695 1.9E-263 T 14-09-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AY555_RS06710 2d690770df9e76e28501ff48972af71e 704 Pfam PF13089 Polyphosphate kinase N-terminal domain 9 114 4.3E-40 T 14-09-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 AY555_RS06710 2d690770df9e76e28501ff48972af71e 704 SUPERFAMILY SSF140356 6 110 4.71E-39 T 14-09-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 AY555_RS09600 e578f1b67ddb8a1b63ae3213567d5bb5 122 PANTHER PTHR26402 2 113 3.2E-37 T 14-09-2016 AY555_RS09600 e578f1b67ddb8a1b63ae3213567d5bb5 122 Gene3D G3DSA:3.40.50.2300 2 117 1.4E-35 T 14-09-2016 AY555_RS09600 e578f1b67ddb8a1b63ae3213567d5bb5 122 SUPERFAMILY SSF52172 1 118 1.85E-36 T 14-09-2016 IPR011006 CheY-like superfamily AY555_RS09600 e578f1b67ddb8a1b63ae3213567d5bb5 122 SMART SM00448 2 115 5.4E-35 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS09600 e578f1b67ddb8a1b63ae3213567d5bb5 122 Pfam PF00072 Response regulator receiver domain 5 114 7.3E-29 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS04005 7448c59a6f0f06693c39326c2b77928d 513 Pfam PF13184 NusA-like KH domain 236 303 1.1E-28 T 14-09-2016 IPR025249 KH domain, NusA-like GO:0003723 AY555_RS04005 7448c59a6f0f06693c39326c2b77928d 513 Gene3D G3DSA:3.30.300.20 285 352 8.6E-32 T 14-09-2016 IPR015946 K homology domain-like, alpha/beta AY555_RS04005 7448c59a6f0f06693c39326c2b77928d 513 PANTHER PTHR22648 8 454 3.6E-172 T 14-09-2016 AY555_RS04005 7448c59a6f0f06693c39326c2b77928d 513 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 12 348 5.6E-131 T 14-09-2016 IPR010213 Transcription termination factor NusA GO:0003723 AY555_RS04005 7448c59a6f0f06693c39326c2b77928d 513 Gene3D G3DSA:3.30.300.20 205 283 7.3E-36 T 14-09-2016 IPR015946 K homology domain-like, alpha/beta AY555_RS04005 7448c59a6f0f06693c39326c2b77928d 513 SUPERFAMILY SSF50249 138 205 4.05E-19 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS04005 7448c59a6f0f06693c39326c2b77928d 513 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 9 431 30.215 T 14-09-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 AY555_RS04005 7448c59a6f0f06693c39326c2b77928d 513 Gene3D G3DSA:2.40.50.140 136 204 8.1E-28 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS04005 7448c59a6f0f06693c39326c2b77928d 513 SMART SM00316 140 206 1.2E-10 T 14-09-2016 IPR022967 RNA-binding domain, S1 AY555_RS04005 7448c59a6f0f06693c39326c2b77928d 513 SMART SM00322 236 299 21.0 T 14-09-2016 IPR004087 K Homology domain GO:0003676 AY555_RS04005 7448c59a6f0f06693c39326c2b77928d 513 SMART SM00322 307 420 4.0E-4 T 14-09-2016 IPR004087 K Homology domain GO:0003676 AY555_RS04005 7448c59a6f0f06693c39326c2b77928d 513 SUPERFAMILY SSF54814 285 347 5.75E-17 T 14-09-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 AY555_RS04005 7448c59a6f0f06693c39326c2b77928d 513 Gene3D G3DSA:3.30.1480.10 11 132 9.9E-45 T 14-09-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AY555_RS04005 7448c59a6f0f06693c39326c2b77928d 513 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 371 420 4.3E-16 T 14-09-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication AY555_RS04005 7448c59a6f0f06693c39326c2b77928d 513 Pfam PF00575 S1 RNA binding domain 138 200 1.9E-6 T 14-09-2016 IPR003029 S1 domain GO:0003676 AY555_RS04005 7448c59a6f0f06693c39326c2b77928d 513 SUPERFAMILY SSF54814 207 283 7.85E-30 T 14-09-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 AY555_RS04005 7448c59a6f0f06693c39326c2b77928d 513 Gene3D G3DSA:1.10.150.20 360 424 6.5E-16 T 14-09-2016 AY555_RS04005 7448c59a6f0f06693c39326c2b77928d 513 Gene3D G3DSA:1.10.150.20 435 494 5.5E-12 T 14-09-2016 AY555_RS04005 7448c59a6f0f06693c39326c2b77928d 513 SUPERFAMILY SSF69705 10 132 6.41E-38 T 14-09-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AY555_RS04005 7448c59a6f0f06693c39326c2b77928d 513 SUPERFAMILY SSF47794 360 420 6.59E-14 T 14-09-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 AY555_RS04005 7448c59a6f0f06693c39326c2b77928d 513 PANTHER PTHR22648:SF0 8 454 3.6E-172 T 14-09-2016 AY555_RS04005 7448c59a6f0f06693c39326c2b77928d 513 Pfam PF08529 NusA N-terminal domain 11 131 3.9E-35 T 14-09-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AY555_RS06795 30736965b1226feb8a0dd006b90a0b14 641 Pfam PF02780 Transketolase, C-terminal domain 497 617 4.2E-25 T 14-09-2016 IPR033248 Transketolase, C-terminal domain AY555_RS06795 30736965b1226feb8a0dd006b90a0b14 641 Gene3D G3DSA:3.40.50.920 498 628 1.1E-32 T 14-09-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AY555_RS06795 30736965b1226feb8a0dd006b90a0b14 641 SUPERFAMILY SSF52518 243 382 1.79E-81 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AY555_RS06795 30736965b1226feb8a0dd006b90a0b14 641 SUPERFAMILY SSF52518 7 198 1.79E-81 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AY555_RS06795 30736965b1226feb8a0dd006b90a0b14 641 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 628 2.9E-249 T 14-09-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 AY555_RS06795 30736965b1226feb8a0dd006b90a0b14 641 Gene3D G3DSA:3.40.50.970 336 497 2.9E-38 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AY555_RS06795 30736965b1226feb8a0dd006b90a0b14 641 ProSitePatterns PS00802 Transketolase signature 2. 426 442 - T 14-09-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 AY555_RS06795 30736965b1226feb8a0dd006b90a0b14 641 ProSitePatterns PS00801 Transketolase signature 1. 35 54 - T 14-09-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 AY555_RS06795 30736965b1226feb8a0dd006b90a0b14 641 SMART SM00861 320 485 2.7E-66 T 14-09-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AY555_RS06795 30736965b1226feb8a0dd006b90a0b14 641 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 9 629 45.122 T 14-09-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 AY555_RS06795 30736965b1226feb8a0dd006b90a0b14 641 SUPERFAMILY SSF52922 493 628 2.49E-32 T 14-09-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AY555_RS06795 30736965b1226feb8a0dd006b90a0b14 641 Pfam PF02779 Transketolase, pyrimidine binding domain 320 480 7.6E-41 T 14-09-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AY555_RS06795 30736965b1226feb8a0dd006b90a0b14 641 SUPERFAMILY SSF52518 317 506 3.04E-61 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AY555_RS06795 30736965b1226feb8a0dd006b90a0b14 641 PANTHER PTHR11624 241 640 0.0 T 14-09-2016 IPR033247 Transketolase family AY555_RS06795 30736965b1226feb8a0dd006b90a0b14 641 PANTHER PTHR11624 23 217 0.0 T 14-09-2016 IPR033247 Transketolase family AY555_RS06795 30736965b1226feb8a0dd006b90a0b14 641 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 10 283 2.2E-120 T 14-09-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 AY555_RS06795 30736965b1226feb8a0dd006b90a0b14 641 Gene3D G3DSA:3.40.50.970 242 335 1.1E-78 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AY555_RS06795 30736965b1226feb8a0dd006b90a0b14 641 Gene3D G3DSA:3.40.50.970 23 200 1.1E-78 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AY555_RS06795 30736965b1226feb8a0dd006b90a0b14 641 PANTHER PTHR11624:SF20 241 640 0.0 T 14-09-2016 AY555_RS06795 30736965b1226feb8a0dd006b90a0b14 641 PANTHER PTHR11624:SF20 23 217 0.0 T 14-09-2016 AY555_RS03765 3313b09ccd76680f9d915c6394583b66 266 SUPERFAMILY SSF52540 10 262 4.88E-71 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS03765 3313b09ccd76680f9d915c6394583b66 266 PANTHER PTHR13696 3 264 3.2E-92 T 14-09-2016 AY555_RS03765 3313b09ccd76680f9d915c6394583b66 266 PANTHER PTHR13696:SF52 3 264 3.2E-92 T 14-09-2016 AY555_RS03765 3313b09ccd76680f9d915c6394583b66 266 Pfam PF13614 AAA domain 11 186 2.8E-64 T 14-09-2016 IPR025669 AAA domain AY555_RS03765 3313b09ccd76680f9d915c6394583b66 266 Gene3D G3DSA:3.40.50.300 11 263 3.0E-74 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS02515 776e353386b2a5d8d5d626f8b57d1b84 126 Pfam PF01597 Glycine cleavage H-protein 4 120 5.1E-40 T 14-09-2016 IPR002930 Glycine cleavage system H-protein AY555_RS02515 776e353386b2a5d8d5d626f8b57d1b84 126 Gene3D G3DSA:2.40.50.100 3 121 2.7E-46 T 14-09-2016 AY555_RS02515 776e353386b2a5d8d5d626f8b57d1b84 126 SUPERFAMILY SSF51230 2 121 8.5E-41 T 14-09-2016 IPR011053 Single hybrid motif AY555_RS02515 776e353386b2a5d8d5d626f8b57d1b84 126 PANTHER PTHR11715 2 119 5.5E-58 T 14-09-2016 IPR002930 Glycine cleavage system H-protein AY555_RS02515 776e353386b2a5d8d5d626f8b57d1b84 126 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 1 122 25.949 T 14-09-2016 IPR002930 Glycine cleavage system H-protein AY555_RS02515 776e353386b2a5d8d5d626f8b57d1b84 126 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 121 8.3E-41 T 14-09-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 AY555_RS09295 9c30a03299fa9810351bfa22f552e42f 215 PANTHER PTHR11749 1 215 6.2E-118 T 14-09-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AY555_RS09295 9c30a03299fa9810351bfa22f552e42f 215 SUPERFAMILY SSF51366 3 214 3.51E-72 T 14-09-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AY555_RS09295 9c30a03299fa9810351bfa22f552e42f 215 PIRSF PIRSF001461 1 215 4.7E-89 T 14-09-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AY555_RS09295 9c30a03299fa9810351bfa22f552e42f 215 Pfam PF00834 Ribulose-phosphate 3 epimerase family 4 199 2.8E-81 T 14-09-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AY555_RS09295 9c30a03299fa9810351bfa22f552e42f 215 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 134 156 - T 14-09-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AY555_RS09295 9c30a03299fa9810351bfa22f552e42f 215 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 4 214 1.1E-85 T 14-09-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AY555_RS09295 9c30a03299fa9810351bfa22f552e42f 215 Gene3D G3DSA:3.20.20.70 2 214 2.5E-89 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS09295 9c30a03299fa9810351bfa22f552e42f 215 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 32 46 - T 14-09-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AY555_RS05040 87a911b5982368324d3cb57d7acbda0e 306 SUPERFAMILY SSF103481 44 131 2.48E-9 T 14-09-2016 AY555_RS05040 87a911b5982368324d3cb57d7acbda0e 306 PANTHER PTHR32322 2 298 3.3E-59 T 14-09-2016 AY555_RS05040 87a911b5982368324d3cb57d7acbda0e 306 SUPERFAMILY SSF103481 202 279 2.75E-13 T 14-09-2016 AY555_RS05040 87a911b5982368324d3cb57d7acbda0e 306 Pfam PF00892 EamA-like transporter family 140 276 3.1E-20 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AY555_RS05040 87a911b5982368324d3cb57d7acbda0e 306 Pfam PF00892 EamA-like transporter family 6 129 4.2E-15 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AY555_RS05040 87a911b5982368324d3cb57d7acbda0e 306 PANTHER PTHR32322:SF9 2 298 3.3E-59 T 14-09-2016 AY555_RS04090 e7b539df1a71a2fe1ec5c921c2db67a3 260 SUPERFAMILY SSF69572 2 251 2.22E-88 T 14-09-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AY555_RS04090 e7b539df1a71a2fe1ec5c921c2db67a3 260 PANTHER PTHR10953 4 250 1.9E-93 T 14-09-2016 AY555_RS04090 e7b539df1a71a2fe1ec5c921c2db67a3 260 Pfam PF00899 ThiF family 11 245 5.5E-62 T 14-09-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AY555_RS04090 e7b539df1a71a2fe1ec5c921c2db67a3 260 PANTHER PTHR10953:SF153 4 250 1.9E-93 T 14-09-2016 AY555_RS04090 e7b539df1a71a2fe1ec5c921c2db67a3 260 Gene3D G3DSA:3.40.50.720 4 250 2.5E-74 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS05065 515c428f5dba2f02105ae47899eceb4a 353 Pfam PF02547 Queuosine biosynthesis protein 4 347 8.4E-121 T 14-09-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 AY555_RS05065 515c428f5dba2f02105ae47899eceb4a 353 PANTHER PTHR30307 2 348 5.5E-143 T 14-09-2016 AY555_RS05065 515c428f5dba2f02105ae47899eceb4a 353 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 346 9.4E-110 T 14-09-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 AY555_RS05065 515c428f5dba2f02105ae47899eceb4a 353 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 348 43.091 T 14-09-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 AY555_RS05065 515c428f5dba2f02105ae47899eceb4a 353 Gene3D G3DSA:3.40.1780.10 1 60 1.7E-90 T 14-09-2016 AY555_RS05065 515c428f5dba2f02105ae47899eceb4a 353 Gene3D G3DSA:3.40.1780.10 185 347 1.7E-90 T 14-09-2016 AY555_RS05065 515c428f5dba2f02105ae47899eceb4a 353 SUPERFAMILY SSF111337 1 347 6.67E-124 T 14-09-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 AY555_RS05065 515c428f5dba2f02105ae47899eceb4a 353 PANTHER PTHR30307:SF0 2 348 5.5E-143 T 14-09-2016 AY555_RS05065 515c428f5dba2f02105ae47899eceb4a 353 Gene3D G3DSA:2.40.10.240 62 143 1.6E-14 T 14-09-2016 AY555_RS09520 07e91cc1b7e28df235bb34a3a08aed18 144 SMART SM00530 17 72 4.6E-13 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AY555_RS09520 07e91cc1b7e28df235bb34a3a08aed18 144 PANTHER PTHR10245 7 75 7.1E-23 T 14-09-2016 AY555_RS09520 07e91cc1b7e28df235bb34a3a08aed18 144 Pfam PF01381 Helix-turn-helix 21 72 2.6E-14 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AY555_RS09520 07e91cc1b7e28df235bb34a3a08aed18 144 SUPERFAMILY SSF47413 5 81 7.6E-27 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AY555_RS09520 07e91cc1b7e28df235bb34a3a08aed18 144 Gene3D G3DSA:1.10.260.40 14 78 3.0E-18 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AY555_RS09520 07e91cc1b7e28df235bb34a3a08aed18 144 PANTHER PTHR10245:SF38 7 75 7.1E-23 T 14-09-2016 AY555_RS01785 896dda05c7af031b82fb1f472719f4b4 223 Gene3D G3DSA:3.20.20.70 5 216 2.0E-66 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS01785 896dda05c7af031b82fb1f472719f4b4 223 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 7 213 4.5E-49 T 14-09-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 AY555_RS01785 896dda05c7af031b82fb1f472719f4b4 223 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 5 219 37.429 T 14-09-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 AY555_RS01785 896dda05c7af031b82fb1f472719f4b4 223 SUPERFAMILY SSF51366 6 213 1.46E-57 T 14-09-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AY555_RS01785 896dda05c7af031b82fb1f472719f4b4 223 PANTHER PTHR22854 3 216 4.7E-56 T 14-09-2016 AY555_RS01785 896dda05c7af031b82fb1f472719f4b4 223 PANTHER PTHR22854:SF6 3 216 4.7E-56 T 14-09-2016 AY555_RS07360 9ac3aeb9ca282aabb930ca32a6db7084 375 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 10 240 6.9E-40 T 14-09-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 AY555_RS07360 9ac3aeb9ca282aabb930ca32a6db7084 375 Gene3D G3DSA:2.40.37.10 227 364 5.6E-25 T 14-09-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 AY555_RS07360 9ac3aeb9ca282aabb930ca32a6db7084 375 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 183 198 - T 14-09-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 AY555_RS07360 9ac3aeb9ca282aabb930ca32a6db7084 375 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 25 43 - T 14-09-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 AY555_RS07360 9ac3aeb9ca282aabb930ca32a6db7084 375 SUPERFAMILY SSF51419 7 241 2.91E-48 T 14-09-2016 IPR029066 PLP-binding barrel AY555_RS07360 9ac3aeb9ca282aabb930ca32a6db7084 375 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 25 43 4.4E-20 T 14-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AY555_RS07360 9ac3aeb9ca282aabb930ca32a6db7084 375 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 46 58 4.4E-20 T 14-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AY555_RS07360 9ac3aeb9ca282aabb930ca32a6db7084 375 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 150 163 4.4E-20 T 14-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AY555_RS07360 9ac3aeb9ca282aabb930ca32a6db7084 375 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 230 249 4.4E-20 T 14-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AY555_RS07360 9ac3aeb9ca282aabb930ca32a6db7084 375 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 332 345 4.4E-20 T 14-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AY555_RS07360 9ac3aeb9ca282aabb930ca32a6db7084 375 SUPERFAMILY SSF50621 212 356 7.74E-29 T 14-09-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 AY555_RS07360 9ac3aeb9ca282aabb930ca32a6db7084 375 Gene3D G3DSA:3.20.20.10 9 226 5.4E-49 T 14-09-2016 IPR029066 PLP-binding barrel AY555_RS07360 9ac3aeb9ca282aabb930ca32a6db7084 375 PRINTS PR01182 Ornithine decarboxylase signature 298 308 9.2E-9 T 14-09-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 AY555_RS07360 9ac3aeb9ca282aabb930ca32a6db7084 375 PRINTS PR01182 Ornithine decarboxylase signature 261 274 9.2E-9 T 14-09-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 AY555_RS07360 9ac3aeb9ca282aabb930ca32a6db7084 375 PRINTS PR01182 Ornithine decarboxylase signature 23 50 9.2E-9 T 14-09-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 AY555_RS07360 9ac3aeb9ca282aabb930ca32a6db7084 375 PRINTS PR01182 Ornithine decarboxylase signature 319 332 9.2E-9 T 14-09-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 AY555_RS07360 9ac3aeb9ca282aabb930ca32a6db7084 375 PANTHER PTHR11482 1 344 1.4E-76 T 14-09-2016 AY555_RS07360 9ac3aeb9ca282aabb930ca32a6db7084 375 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 248 347 7.2E-14 T 14-09-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 AY555_RS08055 cb5b0d6c1d4c11c4e4e5c7f0a29da203 480 PANTHER PTHR28641:SF1 70 479 4.7E-149 T 14-09-2016 AY555_RS08055 cb5b0d6c1d4c11c4e4e5c7f0a29da203 480 Pfam PF05292 Malonyl-CoA decarboxylase (MCD) 90 450 1.6E-137 T 14-09-2016 IPR007956 Malonyl-CoA decarboxylase GO:0006633|GO:0050080 KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|UniPathway: UPA00340 AY555_RS08055 cb5b0d6c1d4c11c4e4e5c7f0a29da203 480 PANTHER PTHR28641 70 479 4.7E-149 T 14-09-2016 AY555_RS01465 7700ae8d786b8f8c3c7b26e8bc78f849 148 PRINTS PR00608 Class II cytochrome C signature 134 145 5.1E-9 T 14-09-2016 IPR015984 Cytochrome c prime, subgroup AY555_RS01465 7700ae8d786b8f8c3c7b26e8bc78f849 148 PRINTS PR00608 Class II cytochrome C signature 111 134 5.1E-9 T 14-09-2016 IPR015984 Cytochrome c prime, subgroup AY555_RS01465 7700ae8d786b8f8c3c7b26e8bc78f849 148 SUPERFAMILY SSF47175 27 147 3.53E-28 T 14-09-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 AY555_RS01465 7700ae8d786b8f8c3c7b26e8bc78f849 148 Pfam PF01322 Cytochrome C' 28 145 3.8E-29 T 14-09-2016 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 AY555_RS01465 7700ae8d786b8f8c3c7b26e8bc78f849 148 Gene3D G3DSA:1.20.120.10 25 147 3.7E-31 T 14-09-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 AY555_RS01465 7700ae8d786b8f8c3c7b26e8bc78f849 148 PIRSF PIRSF000027 4 147 7.7E-30 T 14-09-2016 IPR012127 Cytochrome c prime GO:0005506|GO:0009055|GO:0020037|GO:0042597 AY555_RS09930 4e1f56c15ce9ca649957ad97d4d8131e 277 Pfam PF05013 N-formylglutamate amidohydrolase 10 240 2.3E-68 T 14-09-2016 IPR007709 N-formylglutamate amidohydrolase AY555_RS09930 4e1f56c15ce9ca649957ad97d4d8131e 277 SUPERFAMILY SSF53187 7 266 1.93E-81 T 14-09-2016 AY555_RS09930 4e1f56c15ce9ca649957ad97d4d8131e 277 Gene3D G3DSA:3.40.630.40 2 267 4.9E-91 T 14-09-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 AY555_RS04620 48ae28d21c4f84a99bb5c4c5dadf28b8 332 Gene3D G3DSA:3.40.1190.20 4 327 3.3E-69 T 14-09-2016 IPR029056 Ribokinase-like AY555_RS04620 48ae28d21c4f84a99bb5c4c5dadf28b8 332 PANTHER PTHR10584 1 328 9.2E-91 T 14-09-2016 AY555_RS04620 48ae28d21c4f84a99bb5c4c5dadf28b8 332 Pfam PF00294 pfkB family carbohydrate kinase 57 315 8.5E-45 T 14-09-2016 IPR011611 Carbohydrate kinase PfkB AY555_RS04620 48ae28d21c4f84a99bb5c4c5dadf28b8 332 PANTHER PTHR10584:SF153 1 328 9.2E-91 T 14-09-2016 AY555_RS04620 48ae28d21c4f84a99bb5c4c5dadf28b8 332 SUPERFAMILY SSF53613 4 317 1.08E-79 T 14-09-2016 IPR029056 Ribokinase-like AY555_RS04620 48ae28d21c4f84a99bb5c4c5dadf28b8 332 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 272 285 - T 14-09-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AY555_RS02010 572d6b994bd6857e77889f6ff45c6b2a 165 Pfam PF13202 EF hand 129 148 3.2E-5 T 14-09-2016 IPR002048 EF-hand domain GO:0005509 AY555_RS02010 572d6b994bd6857e77889f6ff45c6b2a 165 Gene3D G3DSA:1.10.238.10 73 151 6.7E-12 T 14-09-2016 IPR011992 EF-hand domain pair AY555_RS02010 572d6b994bd6857e77889f6ff45c6b2a 165 ProSitePatterns PS00018 EF-hand calcium-binding domain. 65 77 - T 14-09-2016 IPR018247 EF-Hand 1, calcium-binding site AY555_RS02010 572d6b994bd6857e77889f6ff45c6b2a 165 Pfam PF13499 EF-hand domain pair 60 124 2.0E-8 T 14-09-2016 IPR002048 EF-hand domain GO:0005509 AY555_RS02010 572d6b994bd6857e77889f6ff45c6b2a 165 ProSitePatterns PS00018 EF-hand calcium-binding domain. 110 122 - T 14-09-2016 IPR018247 EF-Hand 1, calcium-binding site AY555_RS02010 572d6b994bd6857e77889f6ff45c6b2a 165 SUPERFAMILY SSF47473 13 79 7.27E-5 T 14-09-2016 IPR011992 EF-hand domain pair AY555_RS02010 572d6b994bd6857e77889f6ff45c6b2a 165 ProSitePatterns PS00018 EF-hand calcium-binding domain. 133 145 - T 14-09-2016 IPR018247 EF-Hand 1, calcium-binding site AY555_RS02010 572d6b994bd6857e77889f6ff45c6b2a 165 SUPERFAMILY SSF47473 60 153 1.0E-15 T 14-09-2016 IPR011992 EF-hand domain pair AY555_RS02010 572d6b994bd6857e77889f6ff45c6b2a 165 Gene3D G3DSA:1.10.238.10 22 72 7.9E-5 T 14-09-2016 IPR011992 EF-hand domain pair AY555_RS03375 56fd43eb757f086b996d07fde0e9baeb 417 Pfam PF06850 PHB de-polymerase C-terminus 206 405 4.6E-95 T 14-09-2016 IPR009656 PHB de-polymerase, C-terminal AY555_RS03375 56fd43eb757f086b996d07fde0e9baeb 417 PIRSF PIRSF020818 1 416 3.2E-192 T 14-09-2016 IPR010915 Polyhydroxyalkanoate depolymerase AY555_RS03375 56fd43eb757f086b996d07fde0e9baeb 417 TIGRFAM TIGR01849 PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular 3 405 5.8E-180 T 14-09-2016 IPR010915 Polyhydroxyalkanoate depolymerase AY555_RS03375 56fd43eb757f086b996d07fde0e9baeb 417 SUPERFAMILY SSF53474 99 405 6.97E-30 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AY555_RS00315 bf5e620bbc788959f7a6c26b33a3dad1 415 TIGRFAM TIGR01328 met_gam_lyase: methionine gamma-lyase 7 396 1.0E-169 T 14-09-2016 IPR006237 L-methionine gamma-lyase GO:0018826 AY555_RS00315 bf5e620bbc788959f7a6c26b33a3dad1 415 Gene3D G3DSA:3.40.640.10 8 259 8.2E-91 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AY555_RS00315 bf5e620bbc788959f7a6c26b33a3dad1 415 PIRSF PIRSF001434 1 398 3.5E-138 T 14-09-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AY555_RS00315 bf5e620bbc788959f7a6c26b33a3dad1 415 PANTHER PTHR11808 8 399 1.5E-172 T 14-09-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AY555_RS00315 bf5e620bbc788959f7a6c26b33a3dad1 415 Gene3D G3DSA:3.90.1150.10 260 396 1.4E-48 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AY555_RS00315 bf5e620bbc788959f7a6c26b33a3dad1 415 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 11 394 1.3E-130 T 14-09-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AY555_RS00315 bf5e620bbc788959f7a6c26b33a3dad1 415 SUPERFAMILY SSF53383 28 395 1.36E-114 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AY555_RS07580 bf7212552a2980e42e944a6d5225fb41 145 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 4 131 1.0E-28 T 14-09-2016 IPR000944 Transcription regulator Rrf2-type AY555_RS07580 bf7212552a2980e42e944a6d5225fb41 145 PANTHER PTHR33221:SF2 3 139 4.7E-41 T 14-09-2016 AY555_RS07580 bf7212552a2980e42e944a6d5225fb41 145 Gene3D G3DSA:1.10.10.10 3 133 2.8E-35 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS07580 bf7212552a2980e42e944a6d5225fb41 145 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 48 66 - T 14-09-2016 IPR030489 Transcription regulator Rrf2-type, conserved site AY555_RS07580 bf7212552a2980e42e944a6d5225fb41 145 SUPERFAMILY SSF46785 3 133 1.22E-34 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS07580 bf7212552a2980e42e944a6d5225fb41 145 TIGRFAM TIGR02944 suf_reg_Xantho: FeS assembly SUF system regulator 1 130 4.6E-41 T 14-09-2016 IPR014290 SUF system FeS cluster assembly regulator AY555_RS07580 bf7212552a2980e42e944a6d5225fb41 145 PANTHER PTHR33221 3 139 4.7E-41 T 14-09-2016 AY555_RS07580 bf7212552a2980e42e944a6d5225fb41 145 Pfam PF02082 Transcriptional regulator 3 82 3.2E-20 T 14-09-2016 IPR000944 Transcription regulator Rrf2-type AY555_RS07170 e2d3b714b14c91dbb43b4ce11c917a96 435 SUPERFAMILY SSF56935 34 435 4.94E-84 T 14-09-2016 AY555_RS07170 e2d3b714b14c91dbb43b4ce11c917a96 435 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 26 435 9.8E-100 T 14-09-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AY555_RS07170 e2d3b714b14c91dbb43b4ce11c917a96 435 PANTHER PTHR35093:SF2 11 435 4.4E-101 T 14-09-2016 AY555_RS07170 e2d3b714b14c91dbb43b4ce11c917a96 435 PANTHER PTHR35093 11 435 4.4E-101 T 14-09-2016 AY555_RS07170 e2d3b714b14c91dbb43b4ce11c917a96 435 Gene3D G3DSA:2.40.160.60 34 435 1.7E-114 T 14-09-2016 AY555_RS00965 c95da3c87559195c43b3a11cb84a3fa9 241 Pfam PF00297 Ribosomal protein L3 97 180 3.3E-12 T 14-09-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00965 c95da3c87559195c43b3a11cb84a3fa9 241 Gene3D G3DSA:2.40.30.10 4 33 3.6E-7 T 14-09-2016 AY555_RS00965 c95da3c87559195c43b3a11cb84a3fa9 241 Gene3D G3DSA:2.40.30.10 159 210 3.6E-7 T 14-09-2016 AY555_RS00965 c95da3c87559195c43b3a11cb84a3fa9 241 SUPERFAMILY SSF50447 1 214 3.18E-80 T 14-09-2016 IPR009000 Translation protein, beta-barrel domain AY555_RS00965 c95da3c87559195c43b3a11cb84a3fa9 241 Gene3D G3DSA:4.10.960.10 77 158 1.3E-27 T 14-09-2016 AY555_RS00965 c95da3c87559195c43b3a11cb84a3fa9 241 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 205 3.3E-84 T 14-09-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00965 c95da3c87559195c43b3a11cb84a3fa9 241 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 14-09-2016 IPR019926 Ribosomal protein L3, conserved site AY555_RS00965 c95da3c87559195c43b3a11cb84a3fa9 241 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 208 36.999 T 14-09-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00965 c95da3c87559195c43b3a11cb84a3fa9 241 PANTHER PTHR11229 1 212 7.4E-112 T 14-09-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS08340 e16c9c8e785e958fb5ae47be6b877a04 121 PRINTS PR01853 Bacterial YajC preprotein translocase signature 22 42 1.8E-17 T 14-09-2016 IPR003849 Preprotein translocase YajC AY555_RS08340 e16c9c8e785e958fb5ae47be6b877a04 121 PRINTS PR01853 Bacterial YajC preprotein translocase signature 60 78 1.8E-17 T 14-09-2016 IPR003849 Preprotein translocase YajC AY555_RS08340 e16c9c8e785e958fb5ae47be6b877a04 121 PANTHER PTHR33909:SF1 1 106 4.0E-27 T 14-09-2016 AY555_RS08340 e16c9c8e785e958fb5ae47be6b877a04 121 Pfam PF02699 Preprotein translocase subunit 24 98 8.6E-29 T 14-09-2016 IPR003849 Preprotein translocase YajC AY555_RS08340 e16c9c8e785e958fb5ae47be6b877a04 121 SMART SM01323 20 102 1.0E-42 T 14-09-2016 IPR003849 Preprotein translocase YajC AY555_RS08340 e16c9c8e785e958fb5ae47be6b877a04 121 PANTHER PTHR33909 1 106 4.0E-27 T 14-09-2016 AY555_RS08340 e16c9c8e785e958fb5ae47be6b877a04 121 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 22 101 9.9E-29 T 14-09-2016 IPR003849 Preprotein translocase YajC AY555_RS00385 fd66d536bbb58b59da12346076f7c8c3 240 Pfam PF04172 LrgB-like family 23 235 2.6E-76 T 14-09-2016 IPR007300 CidB/LrgB family AY555_RS00385 fd66d536bbb58b59da12346076f7c8c3 240 PANTHER PTHR30249:SF5 1 238 3.0E-87 T 14-09-2016 AY555_RS00385 fd66d536bbb58b59da12346076f7c8c3 240 PANTHER PTHR30249 1 238 3.0E-87 T 14-09-2016 AY555_RS05325 c2b03266026edadbdbc87cf9ca5363d6 245 Pfam PF08241 Methyltransferase domain 84 129 9.6E-7 T 14-09-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AY555_RS05325 c2b03266026edadbdbc87cf9ca5363d6 245 SUPERFAMILY SSF53335 25 214 8.79E-21 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS05325 c2b03266026edadbdbc87cf9ca5363d6 245 Gene3D G3DSA:3.40.50.150 26 215 3.8E-16 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS08470 14c5407580de3ab0ffaff706127cb1a1 519 Gene3D G3DSA:3.40.50.620 5 115 7.0E-74 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS08470 14c5407580de3ab0ffaff706127cb1a1 519 Gene3D G3DSA:3.40.50.620 230 338 7.0E-74 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS08470 14c5407580de3ab0ffaff706127cb1a1 519 PRINTS PR01041 Methionyl-tRNA synthetase signature 41 55 1.7E-33 T 14-09-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 AY555_RS08470 14c5407580de3ab0ffaff706127cb1a1 519 PRINTS PR01041 Methionyl-tRNA synthetase signature 353 364 1.7E-33 T 14-09-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 AY555_RS08470 14c5407580de3ab0ffaff706127cb1a1 519 PRINTS PR01041 Methionyl-tRNA synthetase signature 89 100 1.7E-33 T 14-09-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 AY555_RS08470 14c5407580de3ab0ffaff706127cb1a1 519 PRINTS PR01041 Methionyl-tRNA synthetase signature 261 276 1.7E-33 T 14-09-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 AY555_RS08470 14c5407580de3ab0ffaff706127cb1a1 519 PRINTS PR01041 Methionyl-tRNA synthetase signature 9 22 1.7E-33 T 14-09-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 AY555_RS08470 14c5407580de3ab0ffaff706127cb1a1 519 PRINTS PR01041 Methionyl-tRNA synthetase signature 228 239 1.7E-33 T 14-09-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 AY555_RS08470 14c5407580de3ab0ffaff706127cb1a1 519 PANTHER PTHR11946:SF1 5 512 5.0E-246 T 14-09-2016 AY555_RS08470 14c5407580de3ab0ffaff706127cb1a1 519 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 510 48.824 T 14-09-2016 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AY555_RS08470 14c5407580de3ab0ffaff706127cb1a1 519 SUPERFAMILY SSF52374 4 351 4.29E-110 T 14-09-2016 AY555_RS08470 14c5407580de3ab0ffaff706127cb1a1 519 PANTHER PTHR11946 5 512 5.0E-246 T 14-09-2016 AY555_RS08470 14c5407580de3ab0ffaff706127cb1a1 519 SUPERFAMILY SSF47323 354 510 3.74E-39 T 14-09-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS08470 14c5407580de3ab0ffaff706127cb1a1 519 Gene3D G3DSA:2.170.220.10 118 229 5.5E-46 T 14-09-2016 AY555_RS08470 14c5407580de3ab0ffaff706127cb1a1 519 Gene3D G3DSA:1.10.730.10 343 510 6.5E-51 T 14-09-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS08470 14c5407580de3ab0ffaff706127cb1a1 519 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 7 483 3.9E-155 T 14-09-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 AY555_RS08470 14c5407580de3ab0ffaff706127cb1a1 519 Pfam PF09334 tRNA synthetases class I (M) 7 366 5.0E-110 T 14-09-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS00785 83a59a7247477622b62578d9954e57dd 230 Pfam PF03099 Biotin/lipoate A/B protein ligase family 68 165 2.7E-7 T 14-09-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 AY555_RS00785 83a59a7247477622b62578d9954e57dd 230 PANTHER PTHR10993 7 211 2.0E-72 T 14-09-2016 AY555_RS00785 83a59a7247477622b62578d9954e57dd 230 SUPERFAMILY SSF55681 12 213 5.47E-64 T 14-09-2016 AY555_RS00785 83a59a7247477622b62578d9954e57dd 230 Gene3D G3DSA:3.90.1550.10 8 211 3.2E-70 T 14-09-2016 AY555_RS00785 83a59a7247477622b62578d9954e57dd 230 Hamap MF_00013 Octanoyltransferase [lipB]. 6 213 35.444 T 14-09-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 AY555_RS00785 83a59a7247477622b62578d9954e57dd 230 PANTHER PTHR10993:SF10 7 211 2.0E-72 T 14-09-2016 AY555_RS00785 83a59a7247477622b62578d9954e57dd 230 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 73 88 - T 14-09-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 AY555_RS00785 83a59a7247477622b62578d9954e57dd 230 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 38 210 2.5E-50 T 14-09-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 AY555_RS00785 83a59a7247477622b62578d9954e57dd 230 PIRSF PIRSF016262 4 221 1.8E-58 T 14-09-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 AY555_RS00785 83a59a7247477622b62578d9954e57dd 230 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 78 130 3.0E-16 T 14-09-2016 AY555_RS01155 ce2a6bf4944afe8bc04d7dd24783e901 101 Gene3D G3DSA:3.30.70.900 2 94 1.1E-21 T 14-09-2016 AY555_RS01155 ce2a6bf4944afe8bc04d7dd24783e901 101 Pfam PF07876 Stress responsive A/B Barrel Domain 2 93 7.0E-20 T 14-09-2016 IPR013097 Stress responsive alpha-beta barrel AY555_RS01155 ce2a6bf4944afe8bc04d7dd24783e901 101 SUPERFAMILY SSF54909 2 94 1.46E-23 T 14-09-2016 IPR011008 Dimeric alpha-beta barrel AY555_RS01155 ce2a6bf4944afe8bc04d7dd24783e901 101 SMART SM00886 2 94 2.5E-22 T 14-09-2016 IPR013097 Stress responsive alpha-beta barrel AY555_RS02600 ffb239c9eef8b06d1cad4e56f6d7df5f 360 PANTHER PTHR12526 328 358 4.6E-14 T 14-09-2016 AY555_RS02600 ffb239c9eef8b06d1cad4e56f6d7df5f 360 PANTHER PTHR12526 157 296 4.6E-14 T 14-09-2016 AY555_RS02600 ffb239c9eef8b06d1cad4e56f6d7df5f 360 Pfam PF13692 Glycosyl transferases group 1 172 292 4.5E-16 T 14-09-2016 AY555_RS02600 ffb239c9eef8b06d1cad4e56f6d7df5f 360 Gene3D G3DSA:3.40.50.2000 171 293 2.3E-13 T 14-09-2016 AY555_RS02600 ffb239c9eef8b06d1cad4e56f6d7df5f 360 PANTHER PTHR12526:SF373 328 358 4.6E-14 T 14-09-2016 AY555_RS02600 ffb239c9eef8b06d1cad4e56f6d7df5f 360 PANTHER PTHR12526:SF373 157 296 4.6E-14 T 14-09-2016 AY555_RS02600 ffb239c9eef8b06d1cad4e56f6d7df5f 360 SUPERFAMILY SSF53756 82 295 9.87E-28 T 14-09-2016 AY555_RS01135 cd708343034f24bad6c720008a12ec20 246 Gene3D G3DSA:1.10.287.500 103 145 5.4E-6 T 14-09-2016 AY555_RS01135 cd708343034f24bad6c720008a12ec20 246 Gene3D G3DSA:1.10.287.500 154 195 3.8E-10 T 14-09-2016 AY555_RS01135 cd708343034f24bad6c720008a12ec20 246 SUPERFAMILY SSF75708 69 244 3.01E-33 T 14-09-2016 AY555_RS01135 cd708343034f24bad6c720008a12ec20 246 Pfam PF04344 Chemotaxis phosphatase, CheZ 156 244 2.5E-8 T 14-09-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- AY555_RS06835 f349d5558144f55acf19494a4f48568f 753 Gene3D G3DSA:1.10.274.10 204 311 1.9E-30 T 14-09-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AY555_RS06835 f349d5558144f55acf19494a4f48568f 753 SUPERFAMILY SSF47831 204 322 1.83E-27 T 14-09-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AY555_RS06835 f349d5558144f55acf19494a4f48568f 753 SUPERFAMILY SSF51621 428 723 6.02E-88 T 14-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AY555_RS06835 f349d5558144f55acf19494a4f48568f 753 PANTHER PTHR22931:SF23 217 727 2.0E-169 T 14-09-2016 AY555_RS06835 f349d5558144f55acf19494a4f48568f 753 PANTHER PTHR22931 217 727 2.0E-169 T 14-09-2016 AY555_RS06835 f349d5558144f55acf19494a4f48568f 753 Gene3D G3DSA:3.30.450.40 13 168 5.3E-39 T 14-09-2016 IPR029016 GAF domain-like AY555_RS06835 f349d5558144f55acf19494a4f48568f 753 SUPERFAMILY SSF55781 12 163 2.62E-25 T 14-09-2016 IPR029016 GAF domain-like AY555_RS06835 f349d5558144f55acf19494a4f48568f 753 Pfam PF05524 PEP-utilising enzyme, N-terminal 189 305 1.4E-22 T 14-09-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AY555_RS06835 f349d5558144f55acf19494a4f48568f 753 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 470 489 4.5E-18 T 14-09-2016 AY555_RS06835 f349d5558144f55acf19494a4f48568f 753 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 641 656 4.5E-18 T 14-09-2016 AY555_RS06835 f349d5558144f55acf19494a4f48568f 753 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 624 639 4.5E-18 T 14-09-2016 AY555_RS06835 f349d5558144f55acf19494a4f48568f 753 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 677 689 4.5E-18 T 14-09-2016 AY555_RS06835 f349d5558144f55acf19494a4f48568f 753 SUPERFAMILY SSF52009 304 417 1.96E-28 T 14-09-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AY555_RS06835 f349d5558144f55acf19494a4f48568f 753 Gene3D G3DSA:3.20.20.60 433 730 2.9E-82 T 14-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AY555_RS06835 f349d5558144f55acf19494a4f48568f 753 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 429 718 2.6E-79 T 14-09-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AY555_RS06835 f349d5558144f55acf19494a4f48568f 753 Gene3D G3DSA:3.50.30.10 312 432 7.8E-32 T 14-09-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AY555_RS06835 f349d5558144f55acf19494a4f48568f 753 Pfam PF13185 GAF domain 39 162 4.5E-12 T 14-09-2016 IPR003018 GAF domain GO:0005515 AY555_RS06835 f349d5558144f55acf19494a4f48568f 753 Pfam PF00391 PEP-utilising enzyme, mobile domain 329 402 3.5E-17 T 14-09-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AY555_RS06835 f349d5558144f55acf19494a4f48568f 753 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 188 731 1.2E-117 T 14-09-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AY555_RS06835 f349d5558144f55acf19494a4f48568f 753 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 624 642 - T 14-09-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AY555_RS06835 f349d5558144f55acf19494a4f48568f 753 SMART SM00065 27 173 9.7E-14 T 14-09-2016 IPR003018 GAF domain GO:0005515 AY555_RS06195 99ec4debf98eff66e89d9c560b7fc4dc 357 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 1 350 36.336 T 14-09-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 AY555_RS06195 99ec4debf98eff66e89d9c560b7fc4dc 357 Pfam PF03702 Uncharacterised protein family (UPF0075) 1 345 3.2E-99 T 14-09-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 AY555_RS06195 99ec4debf98eff66e89d9c560b7fc4dc 357 PANTHER PTHR30605 1 355 1.4E-123 T 14-09-2016 AY555_RS06195 99ec4debf98eff66e89d9c560b7fc4dc 357 Gene3D G3DSA:3.30.420.40 1 185 3.0E-65 T 14-09-2016 AY555_RS06195 99ec4debf98eff66e89d9c560b7fc4dc 357 SUPERFAMILY SSF53067 132 323 9.32E-17 T 14-09-2016 AY555_RS06195 99ec4debf98eff66e89d9c560b7fc4dc 357 SUPERFAMILY SSF53067 8 28 9.32E-17 T 14-09-2016 AY555_RS06195 99ec4debf98eff66e89d9c560b7fc4dc 357 SUPERFAMILY SSF53067 57 102 9.32E-17 T 14-09-2016 AY555_RS07115 ac11c5f303ba744e7f3d649c2b6c1c1c 262 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 17 229 1.9E-56 T 14-09-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 AY555_RS07115 ac11c5f303ba744e7f3d649c2b6c1c1c 262 SMART SM01133 16 248 3.5E-61 T 14-09-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 AY555_RS07115 ac11c5f303ba744e7f3d649c2b6c1c1c 262 PIRSF PIRSF001357 10 255 2.2E-62 T 14-09-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 AY555_RS07115 ac11c5f303ba744e7f3d649c2b6c1c1c 262 PANTHER PTHR10889 9 252 1.5E-83 T 14-09-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 AY555_RS07115 ac11c5f303ba744e7f3d649c2b6c1c1c 262 PANTHER PTHR10889:SF3 9 252 1.5E-83 T 14-09-2016 AY555_RS07115 ac11c5f303ba744e7f3d649c2b6c1c1c 262 Pfam PF01791 DeoC/LacD family aldolase 20 215 2.8E-26 T 14-09-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 AY555_RS07115 ac11c5f303ba744e7f3d649c2b6c1c1c 262 SUPERFAMILY SSF51569 11 248 4.71E-69 T 14-09-2016 AY555_RS07115 ac11c5f303ba744e7f3d649c2b6c1c1c 262 Gene3D G3DSA:3.20.20.70 9 252 3.6E-77 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS08935 be42a97a3e2430d2d3c140308d06a126 237 SUPERFAMILY SSF51306 113 235 2.79E-31 T 14-09-2016 IPR015927 Peptidase S24/S26A/S26B/S26C AY555_RS08935 be42a97a3e2430d2d3c140308d06a126 237 PANTHER PTHR33516:SF2 107 237 1.6E-67 T 14-09-2016 AY555_RS08935 be42a97a3e2430d2d3c140308d06a126 237 PANTHER PTHR33516:SF2 1 74 1.6E-67 T 14-09-2016 AY555_RS08935 be42a97a3e2430d2d3c140308d06a126 237 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 190 202 1.8E-8 T 14-09-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AY555_RS08935 be42a97a3e2430d2d3c140308d06a126 237 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 161 172 1.8E-8 T 14-09-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AY555_RS08935 be42a97a3e2430d2d3c140308d06a126 237 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 150 160 1.8E-8 T 14-09-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AY555_RS08935 be42a97a3e2430d2d3c140308d06a126 237 Gene3D G3DSA:1.10.10.10 2 67 2.6E-20 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS08935 be42a97a3e2430d2d3c140308d06a126 237 Gene3D G3DSA:2.10.109.10 114 237 2.8E-37 T 14-09-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain AY555_RS08935 be42a97a3e2430d2d3c140308d06a126 237 Pfam PF01726 LexA DNA binding domain 2 63 1.6E-13 T 14-09-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 AY555_RS08935 be42a97a3e2430d2d3c140308d06a126 237 Pfam PF00717 Peptidase S24-like 153 216 1.4E-12 T 14-09-2016 IPR019759 Peptidase S24/S26A/S26B AY555_RS08935 be42a97a3e2430d2d3c140308d06a126 237 TIGRFAM TIGR00498 lexA: repressor LexA 2 236 3.6E-48 T 14-09-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AY555_RS08935 be42a97a3e2430d2d3c140308d06a126 237 SUPERFAMILY SSF46785 2 68 3.11E-16 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS08935 be42a97a3e2430d2d3c140308d06a126 237 Hamap MF_00015 LexA repressor [lexA]. 1 237 32.265 T 14-09-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AY555_RS08935 be42a97a3e2430d2d3c140308d06a126 237 PANTHER PTHR33516 107 237 1.6E-67 T 14-09-2016 AY555_RS08935 be42a97a3e2430d2d3c140308d06a126 237 PANTHER PTHR33516 1 74 1.6E-67 T 14-09-2016 AY555_RS08625 998af0b79f5f4ac8320a31367b4a1b80 281 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 14 240 7.5E-63 T 14-09-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AY555_RS08625 998af0b79f5f4ac8320a31367b4a1b80 281 ProSitePatterns PS01218 TatC family signature. 168 187 - T 14-09-2016 IPR019820 Sec-independent periplasmic protein translocase, conserved site AY555_RS08625 998af0b79f5f4ac8320a31367b4a1b80 281 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 111 137 1.0E-38 T 14-09-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AY555_RS08625 998af0b79f5f4ac8320a31367b4a1b80 281 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 13 40 1.0E-38 T 14-09-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AY555_RS08625 998af0b79f5f4ac8320a31367b4a1b80 281 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 93 111 1.0E-38 T 14-09-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AY555_RS08625 998af0b79f5f4ac8320a31367b4a1b80 281 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 168 196 1.0E-38 T 14-09-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AY555_RS08625 998af0b79f5f4ac8320a31367b4a1b80 281 PANTHER PTHR30371 7 273 3.0E-87 T 14-09-2016 AY555_RS08625 998af0b79f5f4ac8320a31367b4a1b80 281 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 7 254 18.364 T 14-09-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AY555_RS08625 998af0b79f5f4ac8320a31367b4a1b80 281 Pfam PF00902 Sec-independent protein translocase protein (TatC) 17 235 1.6E-65 T 14-09-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AY555_RS08625 998af0b79f5f4ac8320a31367b4a1b80 281 PANTHER PTHR30371:SF0 7 273 3.0E-87 T 14-09-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AY555_RS06325 0f9841753165c0c1fffdd9b17192611d 204 SUPERFAMILY SSF53328 27 172 1.44E-27 T 14-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AY555_RS06325 0f9841753165c0c1fffdd9b17192611d 204 Gene3D G3DSA:3.40.50.170 51 167 3.4E-26 T 14-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AY555_RS06325 0f9841753165c0c1fffdd9b17192611d 204 PANTHER PTHR11138 40 166 1.1E-18 T 14-09-2016 AY555_RS06325 0f9841753165c0c1fffdd9b17192611d 204 Pfam PF00551 Formyl transferase 52 138 7.3E-17 T 14-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AY555_RS02440 7fe01335183cf42459582acae54869cb 190 Pfam PF05258 Protein of unknown function (DUF721) 43 132 1.8E-16 T 14-09-2016 IPR007922 Protein of unknown function DUF721/UPF0232 AY555_RS02440 7fe01335183cf42459582acae54869cb 190 PIRSF PIRSF032064 16 188 4.1E-27 T 14-09-2016 IPR010593 Protein of unknown function DUF1159 AY555_RS03305 a54806cbceacfac720161e4e24ae8004 310 ProSitePatterns PS00194 Thioredoxin family active site. 48 66 - T 14-09-2016 IPR017937 Thioredoxin, conserved site GO:0045454 AY555_RS03305 a54806cbceacfac720161e4e24ae8004 310 Gene3D G3DSA:1.25.40.10 226 309 2.9E-29 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS03305 a54806cbceacfac720161e4e24ae8004 310 Gene3D G3DSA:1.25.40.10 135 220 6.1E-12 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS03305 a54806cbceacfac720161e4e24ae8004 310 Pfam PF14561 Tetratricopeptide repeat 225 309 9.5E-30 T 14-09-2016 AY555_RS03305 a54806cbceacfac720161e4e24ae8004 310 SUPERFAMILY SSF52833 26 132 2.27E-30 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS03305 a54806cbceacfac720161e4e24ae8004 310 Pfam PF00085 Thioredoxin 29 129 1.8E-24 T 14-09-2016 IPR013766 Thioredoxin domain GO:0045454 AY555_RS03305 a54806cbceacfac720161e4e24ae8004 310 PANTHER PTHR10438 251 272 3.1E-34 T 14-09-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AY555_RS03305 a54806cbceacfac720161e4e24ae8004 310 PANTHER PTHR10438 46 133 3.1E-34 T 14-09-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AY555_RS03305 a54806cbceacfac720161e4e24ae8004 310 Pfam PF14559 Tetratricopeptide repeat 147 214 1.3E-7 T 14-09-2016 AY555_RS03305 a54806cbceacfac720161e4e24ae8004 310 PANTHER PTHR10438:SF264 46 133 3.1E-34 T 14-09-2016 AY555_RS03305 a54806cbceacfac720161e4e24ae8004 310 PANTHER PTHR10438:SF264 251 272 3.1E-34 T 14-09-2016 AY555_RS03305 a54806cbceacfac720161e4e24ae8004 310 Gene3D G3DSA:3.40.30.10 20 130 2.7E-31 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS03305 a54806cbceacfac720161e4e24ae8004 310 SUPERFAMILY SSF48452 139 273 1.41E-10 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS03750 85674426a956225ce0da516cc52a6f13 449 SUPERFAMILY SSF52540 188 368 8.81E-40 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS03750 85674426a956225ce0da516cc52a6f13 449 SUPERFAMILY SSF52540 98 152 8.81E-40 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS03750 85674426a956225ce0da516cc52a6f13 449 SUPERFAMILY SSF116878 378 449 1.96E-48 T 14-09-2016 AY555_RS03750 85674426a956225ce0da516cc52a6f13 449 SUPERFAMILY SSF116878 121 220 1.96E-48 T 14-09-2016 AY555_RS03750 85674426a956225ce0da516cc52a6f13 449 PANTHER PTHR11649:SF56 7 449 8.8E-173 T 14-09-2016 AY555_RS03750 85674426a956225ce0da516cc52a6f13 449 Gene3D G3DSA:3.30.1360.120 2 121 2.8E-40 T 14-09-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AY555_RS03750 85674426a956225ce0da516cc52a6f13 449 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 10 449 1.1E-86 T 14-09-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 AY555_RS03750 85674426a956225ce0da516cc52a6f13 449 Gene3D G3DSA:3.40.50.300 208 247 1.7E-9 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS03750 85674426a956225ce0da516cc52a6f13 449 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 217 334 2.4E-18 T 14-09-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AY555_RS03750 85674426a956225ce0da516cc52a6f13 449 SUPERFAMILY SSF103025 3 120 4.94E-36 T 14-09-2016 AY555_RS03750 85674426a956225ce0da516cc52a6f13 449 Pfam PF01926 50S ribosome-binding GTPase 218 329 8.2E-23 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AY555_RS03750 85674426a956225ce0da516cc52a6f13 449 Gene3D G3DSA:1.20.120.430 122 182 2.5E-56 T 14-09-2016 IPR027368 tRNA modification GTPase MnmE domain 2 AY555_RS03750 85674426a956225ce0da516cc52a6f13 449 Gene3D G3DSA:1.20.120.430 383 449 2.5E-56 T 14-09-2016 IPR027368 tRNA modification GTPase MnmE domain 2 AY555_RS03750 85674426a956225ce0da516cc52a6f13 449 Gene3D G3DSA:1.20.120.430 248 271 2.5E-56 T 14-09-2016 IPR027368 tRNA modification GTPase MnmE domain 2 AY555_RS03750 85674426a956225ce0da516cc52a6f13 449 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 449 31.68 T 14-09-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 AY555_RS03750 85674426a956225ce0da516cc52a6f13 449 Pfam PF10396 GTP-binding protein TrmE N-terminus 5 120 6.2E-35 T 14-09-2016 IPR018948 GTP-binding protein TrmE, N-terminal AY555_RS03750 85674426a956225ce0da516cc52a6f13 449 Pfam PF12631 MnmE helical domain 123 446 3.3E-55 T 14-09-2016 IPR025867 MnmE, helical domain AY555_RS03750 85674426a956225ce0da516cc52a6f13 449 PANTHER PTHR11649 7 449 8.8E-173 T 14-09-2016 AY555_RS06670 0dfadb575f920f6940a1f8cfce04bc7c 82 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 18 71 15.615 T 14-09-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 AY555_RS06670 0dfadb575f920f6940a1f8cfce04bc7c 82 SUPERFAMILY SSF57716 22 68 1.2E-14 T 14-09-2016 AY555_RS06670 0dfadb575f920f6940a1f8cfce04bc7c 82 Gene3D G3DSA:3.30.50.10 22 67 1.2E-18 T 14-09-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 AY555_RS06670 0dfadb575f920f6940a1f8cfce04bc7c 82 Pfam PF03884 Domain of unknown function (DUF329) 24 66 1.4E-14 T 14-09-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 AY555_RS04190 fa500e202d383980787009138d8cc261 177 SUPERFAMILY SSF55486 45 166 1.98E-42 T 14-09-2016 AY555_RS04190 fa500e202d383980787009138d8cc261 177 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 52 160 8.9E-37 T 14-09-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AY555_RS04190 fa500e202d383980787009138d8cc261 177 PANTHER PTHR22881 51 170 1.8E-47 T 14-09-2016 AY555_RS04190 fa500e202d383980787009138d8cc261 177 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 130 140 - T 14-09-2016 IPR020549 Endoribonuclease YbeY, conserved site AY555_RS04190 fa500e202d383980787009138d8cc261 177 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 13 164 24.107 T 14-09-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AY555_RS04190 fa500e202d383980787009138d8cc261 177 Gene3D G3DSA:3.40.390.30 19 163 2.1E-44 T 14-09-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 AY555_RS04190 fa500e202d383980787009138d8cc261 177 Pfam PF02130 Uncharacterized protein family UPF0054 37 159 6.5E-38 T 14-09-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AY555_RS00795 fc2e97a24ae19c4a5fe1fb672eafd160 350 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 10 338 1.9E-115 T 14-09-2016 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 AY555_RS00795 fc2e97a24ae19c4a5fe1fb672eafd160 350 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 8 337 34.184 T 14-09-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 AY555_RS00795 fc2e97a24ae19c4a5fe1fb672eafd160 350 SUPERFAMILY SSF51735 10 159 1.73E-44 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS00795 fc2e97a24ae19c4a5fe1fb672eafd160 350 PANTHER PTHR10174:SF2 71 339 2.5E-69 T 14-09-2016 AY555_RS00795 fc2e97a24ae19c4a5fe1fb672eafd160 350 PANTHER PTHR10174 71 339 2.5E-69 T 14-09-2016 AY555_RS00795 fc2e97a24ae19c4a5fe1fb672eafd160 350 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 142 323 5.1E-47 T 14-09-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AY555_RS00795 fc2e97a24ae19c4a5fe1fb672eafd160 350 Gene3D G3DSA:3.30.360.10 146 319 1.9E-73 T 14-09-2016 AY555_RS00795 fc2e97a24ae19c4a5fe1fb672eafd160 350 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 10 122 1.3E-29 T 14-09-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AY555_RS00795 fc2e97a24ae19c4a5fe1fb672eafd160 350 Gene3D G3DSA:3.40.50.720 9 145 1.2E-52 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS00795 fc2e97a24ae19c4a5fe1fb672eafd160 350 SUPERFAMILY SSF55347 132 324 3.99E-69 T 14-09-2016 AY555_RS00795 fc2e97a24ae19c4a5fe1fb672eafd160 350 PIRSF PIRSF000148 8 341 1.1E-115 T 14-09-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 AY555_RS00795 fc2e97a24ae19c4a5fe1fb672eafd160 350 SMART SM00859 10 125 2.0E-33 T 14-09-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AY555_RS06825 125dd2db4d49717748e558e28c016cae 405 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 14-09-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 AY555_RS06825 125dd2db4d49717748e558e28c016cae 405 Gene3D G3DSA:3.40.1160.10 1 246 5.9E-72 T 14-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AY555_RS06825 125dd2db4d49717748e558e28c016cae 405 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 4 403 4.9E-131 T 14-09-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 AY555_RS06825 125dd2db4d49717748e558e28c016cae 405 Gene3D G3DSA:3.30.70.260 269 330 7.5E-6 T 14-09-2016 AY555_RS06825 125dd2db4d49717748e558e28c016cae 405 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 1 401 1.9E-130 T 14-09-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 AY555_RS06825 125dd2db4d49717748e558e28c016cae 405 SUPERFAMILY SSF55021 328 404 8.39E-22 T 14-09-2016 AY555_RS06825 125dd2db4d49717748e558e28c016cae 405 Pfam PF01842 ACT domain 266 324 6.3E-14 T 14-09-2016 IPR002912 ACT domain GO:0008152|GO:0016597 AY555_RS06825 125dd2db4d49717748e558e28c016cae 405 SUPERFAMILY SSF55021 250 347 3.77E-22 T 14-09-2016 AY555_RS06825 125dd2db4d49717748e558e28c016cae 405 SUPERFAMILY SSF53633 3 243 1.83E-71 T 14-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AY555_RS06825 125dd2db4d49717748e558e28c016cae 405 Pfam PF13840 ACT domain 336 398 3.0E-14 T 14-09-2016 IPR027795 GATS-like ACT domain AY555_RS06825 125dd2db4d49717748e558e28c016cae 405 PIRSF PIRSF000726 58 405 3.1E-130 T 14-09-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 AY555_RS06825 125dd2db4d49717748e558e28c016cae 405 PANTHER PTHR21499 1 404 1.1E-156 T 14-09-2016 AY555_RS06825 125dd2db4d49717748e558e28c016cae 405 PANTHER PTHR21499:SF27 1 404 1.1E-156 T 14-09-2016 AY555_RS06825 125dd2db4d49717748e558e28c016cae 405 Pfam PF00696 Amino acid kinase family 3 230 2.5E-43 T 14-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AY555_RS06825 125dd2db4d49717748e558e28c016cae 405 PRINTS PR00474 Glutamate 5-kinase family signature 204 224 8.8E-7 T 14-09-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AY555_RS06825 125dd2db4d49717748e558e28c016cae 405 PRINTS PR00474 Glutamate 5-kinase family signature 33 47 8.8E-7 T 14-09-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AY555_RS06825 125dd2db4d49717748e558e28c016cae 405 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 8.8E-7 T 14-09-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AY555_RS02145 c91308c70dc61a2e369e886b086a7f24 239 SUPERFAMILY SSF46894 170 213 3.37E-6 T 14-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AY555_RS02145 c91308c70dc61a2e369e886b086a7f24 239 Gene3D G3DSA:1.10.10.10 170 212 1.7E-6 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS02145 c91308c70dc61a2e369e886b086a7f24 239 SUPERFAMILY SSF75516 7 158 1.44E-15 T 14-09-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AY555_RS02145 c91308c70dc61a2e369e886b086a7f24 239 Pfam PF03472 Autoinducer binding domain 19 149 6.5E-12 T 14-09-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AY555_RS02145 c91308c70dc61a2e369e886b086a7f24 239 Gene3D G3DSA:3.30.450.80 8 163 9.3E-14 T 14-09-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AY555_RS01305 7132d969d64f26ccd6615d42e13fb603 179 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 5.2E-16 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AY555_RS01305 7132d969d64f26ccd6615d42e13fb603 179 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 5.2E-16 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AY555_RS01305 7132d969d64f26ccd6615d42e13fb603 179 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 5.2E-16 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AY555_RS01305 7132d969d64f26ccd6615d42e13fb603 179 SUPERFAMILY SSF54909 66 155 8.04E-19 T 14-09-2016 IPR011008 Dimeric alpha-beta barrel AY555_RS01305 7132d969d64f26ccd6615d42e13fb603 179 PANTHER PTHR30154:SF22 1 170 5.7E-62 T 14-09-2016 AY555_RS01305 7132d969d64f26ccd6615d42e13fb603 179 Gene3D G3DSA:3.30.70.920 59 142 3.2E-25 T 14-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AY555_RS01305 7132d969d64f26ccd6615d42e13fb603 179 Pfam PF01037 Lrp/AsnC ligand binding domain 73 146 3.7E-18 T 14-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AY555_RS01305 7132d969d64f26ccd6615d42e13fb603 179 SMART SM00344 6 115 1.6E-44 T 14-09-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AY555_RS01305 7132d969d64f26ccd6615d42e13fb603 179 PANTHER PTHR30154 1 170 5.7E-62 T 14-09-2016 AY555_RS01305 7132d969d64f26ccd6615d42e13fb603 179 SUPERFAMILY SSF46785 5 66 1.81E-19 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS01305 7132d969d64f26ccd6615d42e13fb603 179 Gene3D G3DSA:1.10.10.10 3 57 2.3E-23 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS01305 7132d969d64f26ccd6615d42e13fb603 179 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 52 1.2E-16 T 14-09-2016 AY555_RS07980 3cca9dc42f29a5716a941a6dcf70e73d 167 Pfam PF05257 CHAP domain 28 97 3.9E-9 T 14-09-2016 IPR007921 CHAP domain AY555_RS07980 3cca9dc42f29a5716a941a6dcf70e73d 167 SUPERFAMILY SSF54001 28 148 1.86E-20 T 14-09-2016 AY555_RS08715 8c7a7ce6a8b35119a48bfdde91d8445c 103 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 9 98 3.9E-23 T 14-09-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 AY555_RS08715 8c7a7ce6a8b35119a48bfdde91d8445c 103 PANTHER PTHR11434 6 103 3.5E-40 T 14-09-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 AY555_RS08715 8c7a7ce6a8b35119a48bfdde91d8445c 103 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 4 103 20.08 T 14-09-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 AY555_RS07790 3cb8266b5746b5f0ea82389fde9cfa3a 405 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 14 393 1.3E-141 T 14-09-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 AY555_RS07790 3cb8266b5746b5f0ea82389fde9cfa3a 405 PANTHER PTHR30525 14 403 3.6E-199 T 14-09-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 AY555_RS07790 3cb8266b5746b5f0ea82389fde9cfa3a 405 SUPERFAMILY SSF69055 301 393 4.45E-29 T 14-09-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 AY555_RS07790 3cb8266b5746b5f0ea82389fde9cfa3a 405 Gene3D G3DSA:3.40.50.720 12 159 6.1E-50 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS07790 3cb8266b5746b5f0ea82389fde9cfa3a 405 Gene3D G3DSA:1.10.1740.10 312 394 8.3E-29 T 14-09-2016 AY555_RS07790 3cb8266b5746b5f0ea82389fde9cfa3a 405 SUPERFAMILY SSF51735 14 159 1.34E-46 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS07790 3cb8266b5746b5f0ea82389fde9cfa3a 405 PIRSF PIRSF006205 13 398 9.2E-149 T 14-09-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 AY555_RS07790 3cb8266b5746b5f0ea82389fde9cfa3a 405 Pfam PF13288 DXP reductoisomerase C-terminal domain 270 387 4.5E-40 T 14-09-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 AY555_RS07790 3cb8266b5746b5f0ea82389fde9cfa3a 405 SUPERFAMILY SSF55347 135 273 6.54E-59 T 14-09-2016 AY555_RS07790 3cb8266b5746b5f0ea82389fde9cfa3a 405 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 16 141 4.7E-40 T 14-09-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 AY555_RS07790 3cb8266b5746b5f0ea82389fde9cfa3a 405 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 16 392 45.107 T 14-09-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 AY555_RS07790 3cb8266b5746b5f0ea82389fde9cfa3a 405 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 155 238 9.5E-39 T 14-09-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 AY555_RS03820 467d2e1f7a38467b9254cad70894ecc0 282 PANTHER PTHR21089 1 268 4.3E-81 T 14-09-2016 AY555_RS03820 467d2e1f7a38467b9254cad70894ecc0 282 SUPERFAMILY SSF51735 108 270 4.45E-39 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS03820 467d2e1f7a38467b9254cad70894ecc0 282 Gene3D G3DSA:3.40.192.10 2 112 8.3E-37 T 14-09-2016 AY555_RS03820 467d2e1f7a38467b9254cad70894ecc0 282 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 12 94 2.0E-23 T 14-09-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 AY555_RS03820 467d2e1f7a38467b9254cad70894ecc0 282 Gene3D G3DSA:3.40.50.720 113 269 7.8E-44 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS03820 467d2e1f7a38467b9254cad70894ecc0 282 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 129 183 1.2E-8 T 14-09-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AY555_RS03820 467d2e1f7a38467b9254cad70894ecc0 282 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 8 269 1.6E-67 T 14-09-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 AY555_RS03820 467d2e1f7a38467b9254cad70894ecc0 282 SUPERFAMILY SSF53223 1 107 8.06E-32 T 14-09-2016 AY555_RS03820 467d2e1f7a38467b9254cad70894ecc0 282 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 7 277 32.33 T 14-09-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 AY555_RS00735 68ae847e81a76576601d13ac4e22e0b9 189 PANTHER PTHR26402 9 152 6.2E-30 T 14-09-2016 AY555_RS00735 68ae847e81a76576601d13ac4e22e0b9 189 Pfam PF00072 Response regulator receiver domain 12 125 2.7E-25 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS00735 68ae847e81a76576601d13ac4e22e0b9 189 SUPERFAMILY SSF52172 8 137 2.56E-33 T 14-09-2016 IPR011006 CheY-like superfamily AY555_RS00735 68ae847e81a76576601d13ac4e22e0b9 189 SMART SM00448 9 125 6.5E-28 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS00735 68ae847e81a76576601d13ac4e22e0b9 189 Gene3D G3DSA:3.40.50.2300 7 133 1.6E-30 T 14-09-2016 AY555_RS05825 9bdc22af84714bbd3024168c13d722dd 472 SUPERFAMILY SSF54211 301 457 1.25E-36 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AY555_RS05825 9bdc22af84714bbd3024168c13d722dd 472 SUPERFAMILY SSF54211 253 267 1.25E-36 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AY555_RS05825 9bdc22af84714bbd3024168c13d722dd 472 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 364 430 5.9E-5 T 14-09-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 AY555_RS05825 9bdc22af84714bbd3024168c13d722dd 472 PRINTS PR01874 DNA repair protein radA signature 211 239 6.8E-90 T 14-09-2016 AY555_RS05825 9bdc22af84714bbd3024168c13d722dd 472 PRINTS PR01874 DNA repair protein radA signature 10 34 6.8E-90 T 14-09-2016 AY555_RS05825 9bdc22af84714bbd3024168c13d722dd 472 PRINTS PR01874 DNA repair protein radA signature 172 196 6.8E-90 T 14-09-2016 AY555_RS05825 9bdc22af84714bbd3024168c13d722dd 472 PRINTS PR01874 DNA repair protein radA signature 79 107 6.8E-90 T 14-09-2016 AY555_RS05825 9bdc22af84714bbd3024168c13d722dd 472 PRINTS PR01874 DNA repair protein radA signature 121 138 6.8E-90 T 14-09-2016 AY555_RS05825 9bdc22af84714bbd3024168c13d722dd 472 PRINTS PR01874 DNA repair protein radA signature 320 343 6.8E-90 T 14-09-2016 AY555_RS05825 9bdc22af84714bbd3024168c13d722dd 472 PRINTS PR01874 DNA repair protein radA signature 246 272 6.8E-90 T 14-09-2016 AY555_RS05825 9bdc22af84714bbd3024168c13d722dd 472 Gene3D G3DSA:3.40.50.300 66 272 3.6E-52 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS05825 9bdc22af84714bbd3024168c13d722dd 472 Gene3D G3DSA:3.30.230.10 283 457 1.8E-31 T 14-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AY555_RS05825 9bdc22af84714bbd3024168c13d722dd 472 SMART SM00382 87 242 9.8E-10 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS05825 9bdc22af84714bbd3024168c13d722dd 472 PANTHER PTHR32472 2 426 4.9E-184 T 14-09-2016 AY555_RS05825 9bdc22af84714bbd3024168c13d722dd 472 Pfam PF13481 AAA domain 74 220 1.9E-16 T 14-09-2016 AY555_RS05825 9bdc22af84714bbd3024168c13d722dd 472 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 430 9.8E-167 T 14-09-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AY555_RS05825 9bdc22af84714bbd3024168c13d722dd 472 SUPERFAMILY SSF52540 68 289 6.67E-50 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS05060 ea21d00a3328d73705500bb95c33a667 381 Gene3D G3DSA:3.20.20.105 2 366 2.2E-149 T 14-09-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 AY555_RS05060 ea21d00a3328d73705500bb95c33a667 381 Pfam PF01702 Queuine tRNA-ribosyltransferase 130 363 4.9E-79 T 14-09-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 AY555_RS05060 ea21d00a3328d73705500bb95c33a667 381 PANTHER PTHR21148 1 363 1.1E-153 T 14-09-2016 AY555_RS05060 ea21d00a3328d73705500bb95c33a667 381 PANTHER PTHR21148:SF26 1 363 1.1E-153 T 14-09-2016 AY555_RS05060 ea21d00a3328d73705500bb95c33a667 381 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 6 364 4.4E-139 T 14-09-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 AY555_RS05060 ea21d00a3328d73705500bb95c33a667 381 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 4 361 53.794 T 14-09-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 AY555_RS05060 ea21d00a3328d73705500bb95c33a667 381 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 6 365 1.0E-141 T 14-09-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 AY555_RS05060 ea21d00a3328d73705500bb95c33a667 381 SUPERFAMILY SSF51713 1 364 1.09E-146 T 14-09-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 AY555_RS01450 e95ce0c0ffbb7eec09a507c37a74d750 141 PANTHER PTHR33797 1 140 2.3E-63 T 14-09-2016 AY555_RS01450 e95ce0c0ffbb7eec09a507c37a74d750 141 Gene3D G3DSA:3.30.300.20 48 140 2.7E-35 T 14-09-2016 IPR015946 K homology domain-like, alpha/beta AY555_RS01450 e95ce0c0ffbb7eec09a507c37a74d750 141 SUPERFAMILY SSF82784 1 140 1.57E-41 T 14-09-2016 IPR003718 OsmC/Ohr family AY555_RS01450 e95ce0c0ffbb7eec09a507c37a74d750 141 PANTHER PTHR33797:SF2 1 140 2.3E-63 T 14-09-2016 AY555_RS01450 e95ce0c0ffbb7eec09a507c37a74d750 141 Gene3D G3DSA:2.20.25.10 1 46 2.8E-16 T 14-09-2016 AY555_RS01450 e95ce0c0ffbb7eec09a507c37a74d750 141 Pfam PF02566 OsmC-like protein 43 138 1.3E-15 T 14-09-2016 IPR003718 OsmC/Ohr family AY555_RS01450 e95ce0c0ffbb7eec09a507c37a74d750 141 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 7 139 1.8E-51 T 14-09-2016 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 AY555_RS05315 0a76af5a44617546af6d926b0332e79c 294 SUPERFAMILY SSF48179 178 288 1.47E-34 T 14-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AY555_RS05315 0a76af5a44617546af6d926b0332e79c 294 SUPERFAMILY SSF51735 8 174 6.2E-49 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS05315 0a76af5a44617546af6d926b0332e79c 294 PANTHER PTHR21363 1 293 3.1E-75 T 14-09-2016 AY555_RS05315 0a76af5a44617546af6d926b0332e79c 294 Gene3D G3DSA:3.40.50.720 4 178 5.9E-39 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS05315 0a76af5a44617546af6d926b0332e79c 294 Pfam PF02153 Prephenate dehydrogenase 21 278 1.1E-75 T 14-09-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 AY555_RS05315 0a76af5a44617546af6d926b0332e79c 294 PANTHER PTHR21363:SF0 1 293 3.1E-75 T 14-09-2016 AY555_RS01120 6edab22112cabe010838a469ccf5e949 611 SUPERFAMILY SSF48168 17 87 9.55E-14 T 14-09-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 AY555_RS01120 6edab22112cabe010838a469ccf5e949 611 PANTHER PTHR11573 22 611 2.4E-224 T 14-09-2016 AY555_RS01120 6edab22112cabe010838a469ccf5e949 611 Gene3D G3DSA:3.20.70.20 18 466 2.1E-62 T 14-09-2016 AY555_RS01120 6edab22112cabe010838a469ccf5e949 611 Gene3D G3DSA:3.20.70.20 527 572 2.1E-62 T 14-09-2016 AY555_RS01120 6edab22112cabe010838a469ccf5e949 611 SUPERFAMILY SSF51998 501 572 4.88E-141 T 14-09-2016 AY555_RS01120 6edab22112cabe010838a469ccf5e949 611 SUPERFAMILY SSF51998 91 470 4.88E-141 T 14-09-2016 AY555_RS01120 6edab22112cabe010838a469ccf5e949 611 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 24 88 1.4E-13 T 14-09-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 AY555_RS01120 6edab22112cabe010838a469ccf5e949 611 PRINTS PR01183 Ribonucleotide reductase large chain signature 278 289 1.1E-16 T 14-09-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AY555_RS01120 6edab22112cabe010838a469ccf5e949 611 PRINTS PR01183 Ribonucleotide reductase large chain signature 357 379 1.1E-16 T 14-09-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AY555_RS01120 6edab22112cabe010838a469ccf5e949 611 PRINTS PR01183 Ribonucleotide reductase large chain signature 166 185 1.1E-16 T 14-09-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AY555_RS01120 6edab22112cabe010838a469ccf5e949 611 PRINTS PR01183 Ribonucleotide reductase large chain signature 420 447 1.1E-16 T 14-09-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AY555_RS01120 6edab22112cabe010838a469ccf5e949 611 Pfam PF02867 Ribonucleotide reductase, barrel domain 422 567 6.7E-37 T 14-09-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AY555_RS01120 6edab22112cabe010838a469ccf5e949 611 Pfam PF02867 Ribonucleotide reductase, barrel domain 93 413 1.1E-76 T 14-09-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AY555_RS01925 6cb10d6aaec77870c82aa55b34b84b85 226 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 109 5.8E-27 T 14-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AY555_RS01925 6cb10d6aaec77870c82aa55b34b84b85 226 PANTHER PTHR30614 1 220 1.8E-74 T 14-09-2016 AY555_RS01925 6cb10d6aaec77870c82aa55b34b84b85 226 Gene3D G3DSA:1.10.3720.10 14 214 3.8E-44 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS01925 6cb10d6aaec77870c82aa55b34b84b85 226 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 213 5.1E-17 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS01925 6cb10d6aaec77870c82aa55b34b84b85 226 SUPERFAMILY SSF161098 13 200 1.06E-41 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS01680 43f4961e3359dab086815f3ad839b078 108 Pfam PF01722 BolA-like protein 11 104 1.7E-29 T 14-09-2016 IPR002634 BolA protein AY555_RS01680 43f4961e3359dab086815f3ad839b078 108 Gene3D G3DSA:3.30.70.1500 3 101 7.8E-28 T 14-09-2016 AY555_RS01680 43f4961e3359dab086815f3ad839b078 108 PANTHER PTHR12735 3 104 4.2E-24 T 14-09-2016 AY555_RS01680 43f4961e3359dab086815f3ad839b078 108 PANTHER PTHR12735:SF3 3 104 4.2E-24 T 14-09-2016 AY555_RS01680 43f4961e3359dab086815f3ad839b078 108 PIRSF PIRSF003113 1 107 1.6E-28 T 14-09-2016 IPR002634 BolA protein AY555_RS01680 43f4961e3359dab086815f3ad839b078 108 SUPERFAMILY SSF82657 2 105 2.62E-25 T 14-09-2016 IPR002634 BolA protein AY555_RS04495 d5311e947067284c4ad01b498f17417a 370 Gene3D G3DSA:3.40.50.150 19 220 5.9E-60 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS04495 d5311e947067284c4ad01b498f17417a 370 Pfam PF00145 C-5 cytosine-specific DNA methylase 20 350 2.3E-74 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS04495 d5311e947067284c4ad01b498f17417a 370 PANTHER PTHR10629 20 351 2.3E-54 T 14-09-2016 AY555_RS04495 d5311e947067284c4ad01b498f17417a 370 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 21 37 1.5E-18 T 14-09-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AY555_RS04495 d5311e947067284c4ad01b498f17417a 370 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 178 191 1.5E-18 T 14-09-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AY555_RS04495 d5311e947067284c4ad01b498f17417a 370 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 132 146 1.5E-18 T 14-09-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AY555_RS04495 d5311e947067284c4ad01b498f17417a 370 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 22 349 4.3E-87 T 14-09-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AY555_RS04495 d5311e947067284c4ad01b498f17417a 370 SUPERFAMILY SSF53335 20 352 3.88E-81 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS04495 d5311e947067284c4ad01b498f17417a 370 PANTHER PTHR10629:SF31 20 351 2.3E-54 T 14-09-2016 AY555_RS04495 d5311e947067284c4ad01b498f17417a 370 Gene3D G3DSA:3.90.120.10 237 339 2.0E-25 T 14-09-2016 AY555_RS04495 d5311e947067284c4ad01b498f17417a 370 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 333 351 - T 14-09-2016 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 AY555_RS04495 d5311e947067284c4ad01b498f17417a 370 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 84 96 - T 14-09-2016 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37 AY555_RS06740 e0dbc4d7ffcf61affa18c8b520f6bb12 267 SUPERFAMILY SSF47240 52 233 2.63E-14 T 14-09-2016 IPR009078 Ferritin-like superfamily AY555_RS06740 e0dbc4d7ffcf61affa18c8b520f6bb12 267 PANTHER PTHR21496:SF6 2 265 3.5E-98 T 14-09-2016 AY555_RS06740 e0dbc4d7ffcf61affa18c8b520f6bb12 267 PANTHER PTHR21496 2 265 3.5E-98 T 14-09-2016 AY555_RS06740 e0dbc4d7ffcf61affa18c8b520f6bb12 267 PIRSF PIRSF012318 1 266 1.1E-86 T 14-09-2016 IPR011197 Uncharacterised conserved protein UCP012318 AY555_RS06740 e0dbc4d7ffcf61affa18c8b520f6bb12 267 Pfam PF04305 Protein of unknown function (DUF455) 15 259 1.1E-89 T 14-09-2016 IPR007402 Protein of unknown function DUF455 AY555_RS03620 d89c110a752bd24c63891a3dfc3fee79 164 Pfam PF02559 CarD-like/TRCF domain 6 113 4.1E-15 T 14-09-2016 IPR003711 CarD-like/TRCF domain AY555_RS03620 d89c110a752bd24c63891a3dfc3fee79 164 PANTHER PTHR38447 1 161 1.8E-42 T 14-09-2016 AY555_RS03620 d89c110a752bd24c63891a3dfc3fee79 164 SUPERFAMILY SSF141259 4 70 7.85E-15 T 14-09-2016 IPR003711 CarD-like/TRCF domain AY555_RS03620 d89c110a752bd24c63891a3dfc3fee79 164 SMART SM01058 5 115 1.5E-32 T 14-09-2016 IPR003711 CarD-like/TRCF domain AY555_RS00435 67b6c7f9a98e06c3eec967483d20e05c 326 Gene3D G3DSA:3.40.50.2300 41 154 1.6E-7 T 14-09-2016 AY555_RS00435 67b6c7f9a98e06c3eec967483d20e05c 326 Pfam PF04392 ABC transporter substrate binding protein 50 309 2.2E-16 T 14-09-2016 IPR007487 ABC transporter, substrate-binding protein AY555_RS00435 67b6c7f9a98e06c3eec967483d20e05c 326 Gene3D G3DSA:3.40.50.2300 155 285 3.6E-14 T 14-09-2016 AY555_RS00435 67b6c7f9a98e06c3eec967483d20e05c 326 PANTHER PTHR35271 41 323 3.1E-15 T 14-09-2016 AY555_RS05845 6c0e5812e0ebf3c966ae27fe8314fa6f 508 Gene3D G3DSA:1.10.860.10 23 124 5.3E-28 T 14-09-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AY555_RS05845 6c0e5812e0ebf3c966ae27fe8314fa6f 508 Gene3D G3DSA:3.40.50.300 188 496 8.2E-100 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS05845 6c0e5812e0ebf3c966ae27fe8314fa6f 508 PANTHER PTHR30153 6 433 9.2E-174 T 14-09-2016 AY555_RS05845 6c0e5812e0ebf3c966ae27fe8314fa6f 508 PANTHER PTHR30153 458 506 9.2E-174 T 14-09-2016 AY555_RS05845 6c0e5812e0ebf3c966ae27fe8314fa6f 508 Pfam PF03796 DnaB-like helicase C terminal domain 201 496 5.3E-107 T 14-09-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 AY555_RS05845 6c0e5812e0ebf3c966ae27fe8314fa6f 508 SMART SM00382 218 431 0.0068 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS05845 6c0e5812e0ebf3c966ae27fe8314fa6f 508 SUPERFAMILY SSF48024 21 132 3.14E-33 T 14-09-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AY555_RS05845 6c0e5812e0ebf3c966ae27fe8314fa6f 508 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 23 497 1.6E-160 T 14-09-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 AY555_RS05845 6c0e5812e0ebf3c966ae27fe8314fa6f 508 Pfam PF00772 DnaB-like helicase N terminal domain 23 124 1.8E-27 T 14-09-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AY555_RS05845 6c0e5812e0ebf3c966ae27fe8314fa6f 508 SUPERFAMILY SSF52540 199 429 1.18E-48 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS05845 6c0e5812e0ebf3c966ae27fe8314fa6f 508 SUPERFAMILY SSF52540 463 490 1.18E-48 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS02625 8a11b8dd25c153d228225bd6fcee2724 207 Pfam PF00376 MerR family regulatory protein 6 42 1.1E-14 T 14-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AY555_RS02625 8a11b8dd25c153d228225bd6fcee2724 207 Gene3D G3DSA:3.40.50.1390 60 179 4.6E-19 T 14-09-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AY555_RS02625 8a11b8dd25c153d228225bd6fcee2724 207 ProSitePatterns PS00397 Site-specific recombinases active site. 64 72 - T 14-09-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AY555_RS02625 8a11b8dd25c153d228225bd6fcee2724 207 SUPERFAMILY SSF53041 59 193 9.16E-25 T 14-09-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AY555_RS02625 8a11b8dd25c153d228225bd6fcee2724 207 SMART SM00422 5 79 0.0075 T 14-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AY555_RS02625 8a11b8dd25c153d228225bd6fcee2724 207 PANTHER PTHR30461 38 194 1.9E-27 T 14-09-2016 AY555_RS02625 8a11b8dd25c153d228225bd6fcee2724 207 SMART SM00857 61 201 1.4E-23 T 14-09-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AY555_RS02625 8a11b8dd25c153d228225bd6fcee2724 207 SUPERFAMILY SSF46955 6 47 1.05E-10 T 14-09-2016 IPR009061 Putative DNA-binding domain AY555_RS02625 8a11b8dd25c153d228225bd6fcee2724 207 Gene3D G3DSA:1.10.1660.10 2 46 1.3E-10 T 14-09-2016 AY555_RS02625 8a11b8dd25c153d228225bd6fcee2724 207 Pfam PF00239 Resolvase, N terminal domain 62 194 2.6E-20 T 14-09-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AY555_RS07775 f2c007cd2742331a72c9a486b810f451 173 Gene3D G3DSA:1.10.132.20 55 173 1.2E-41 T 14-09-2016 IPR023584 Ribosome recycling factor domain AY555_RS07775 f2c007cd2742331a72c9a486b810f451 173 SUPERFAMILY SSF55194 1 172 3.14E-66 T 14-09-2016 IPR023584 Ribosome recycling factor domain AY555_RS07775 f2c007cd2742331a72c9a486b810f451 173 TIGRFAM TIGR00496 frr: ribosome recycling factor 1 173 1.1E-64 T 14-09-2016 IPR002661 Ribosome recycling factor GO:0006412 AY555_RS07775 f2c007cd2742331a72c9a486b810f451 173 PANTHER PTHR20982 1 173 2.7E-75 T 14-09-2016 IPR002661 Ribosome recycling factor GO:0006412 AY555_RS07775 f2c007cd2742331a72c9a486b810f451 173 Pfam PF01765 Ribosome recycling factor 9 171 1.9E-60 T 14-09-2016 IPR023584 Ribosome recycling factor domain AY555_RS07775 f2c007cd2742331a72c9a486b810f451 173 Hamap MF_00040 Ribosome-recycling factor [frr]. 1 173 23.42 T 14-09-2016 IPR002661 Ribosome recycling factor GO:0006412 AY555_RS09095 5e873dec13bd3712a0cff9c9b3a0b0ef 153 PANTHER PTHR31503 2 145 1.2E-36 T 14-09-2016 AY555_RS09095 5e873dec13bd3712a0cff9c9b3a0b0ef 153 PANTHER PTHR31503:SF17 2 145 1.2E-36 T 14-09-2016 AY555_RS09095 5e873dec13bd3712a0cff9c9b3a0b0ef 153 Pfam PF03733 Inner membrane component domain 18 68 3.9E-16 T 14-09-2016 IPR005185 Inner membrane component domain AY555_RS09095 5e873dec13bd3712a0cff9c9b3a0b0ef 153 Pfam PF03733 Inner membrane component domain 90 140 1.2E-15 T 14-09-2016 IPR005185 Inner membrane component domain AY555_RS09095 5e873dec13bd3712a0cff9c9b3a0b0ef 153 PIRSF PIRSF028777 15 149 2.1E-43 T 14-09-2016 IPR031308 Uncharacterised conserved protein UCP028777 AY555_RS05245 71c383a32ea0e861a79229768cfb2259 295 SUPERFAMILY SSF46626 31 65 2.07E-26 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AY555_RS05245 71c383a32ea0e861a79229768cfb2259 295 SUPERFAMILY SSF46626 101 199 2.07E-26 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AY555_RS05245 71c383a32ea0e861a79229768cfb2259 295 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 15 58 4.7E-24 T 14-09-2016 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal UniPathway: UPA00705 AY555_RS05245 71c383a32ea0e861a79229768cfb2259 295 Pfam PF00034 Cytochrome c 114 196 4.4E-11 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AY555_RS05245 71c383a32ea0e861a79229768cfb2259 295 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 205 288 1.2E-11 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AY555_RS05245 71c383a32ea0e861a79229768cfb2259 295 PIRSF PIRSF000006 4 295 4.2E-89 T 14-09-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 AY555_RS05245 71c383a32ea0e861a79229768cfb2259 295 Gene3D G3DSA:1.10.760.10 205 294 8.8E-20 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AY555_RS05245 71c383a32ea0e861a79229768cfb2259 295 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 12 295 5.8E-85 T 14-09-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 AY555_RS05245 71c383a32ea0e861a79229768cfb2259 295 SUPERFAMILY SSF46626 206 294 2.07E-19 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AY555_RS05245 71c383a32ea0e861a79229768cfb2259 295 PRINTS PR00605 Class IC cytochrome C signature 266 288 4.4E-9 T 14-09-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AY555_RS05245 71c383a32ea0e861a79229768cfb2259 295 PRINTS PR00605 Class IC cytochrome C signature 212 223 4.4E-9 T 14-09-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AY555_RS05245 71c383a32ea0e861a79229768cfb2259 295 PANTHER PTHR33751:SF1 76 295 8.7E-64 T 14-09-2016 AY555_RS05245 71c383a32ea0e861a79229768cfb2259 295 PANTHER PTHR33751:SF1 1 55 8.7E-64 T 14-09-2016 AY555_RS05245 71c383a32ea0e861a79229768cfb2259 295 PANTHER PTHR33751 76 295 8.7E-64 T 14-09-2016 AY555_RS05245 71c383a32ea0e861a79229768cfb2259 295 PANTHER PTHR33751 1 55 8.7E-64 T 14-09-2016 AY555_RS05245 71c383a32ea0e861a79229768cfb2259 295 Gene3D G3DSA:1.10.760.10 36 58 3.7E-27 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AY555_RS05245 71c383a32ea0e861a79229768cfb2259 295 Gene3D G3DSA:1.10.760.10 105 199 3.7E-27 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AY555_RS06070 05509353e67fc4f0586a9384ad200eef 557 Pfam PF02463 RecF/RecN/SMC N terminal domain 14 511 7.0E-17 T 14-09-2016 IPR003395 RecF/RecN/SMC, N-terminal AY555_RS06070 05509353e67fc4f0586a9384ad200eef 557 Gene3D G3DSA:3.40.50.300 1 206 1.4E-56 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS06070 05509353e67fc4f0586a9384ad200eef 557 PANTHER PTHR11059 2 554 4.9E-146 T 14-09-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AY555_RS06070 05509353e67fc4f0586a9384ad200eef 557 PIRSF PIRSF003128 1 557 1.2E-151 T 14-09-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AY555_RS06070 05509353e67fc4f0586a9384ad200eef 557 Gene3D G3DSA:3.40.50.300 434 500 7.6E-8 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS06070 05509353e67fc4f0586a9384ad200eef 557 Gene3D G3DSA:3.40.50.300 351 383 7.6E-8 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS06070 05509353e67fc4f0586a9384ad200eef 557 SUPERFAMILY SSF52540 1 219 4.99E-57 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS06070 05509353e67fc4f0586a9384ad200eef 557 SUPERFAMILY SSF52540 341 507 4.44E-26 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS06070 05509353e67fc4f0586a9384ad200eef 557 SUPERFAMILY SSF52540 2 50 4.44E-26 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS06070 05509353e67fc4f0586a9384ad200eef 557 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 555 7.3E-142 T 14-09-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AY555_RS01110 f58577e93b7b934c202858bda74dbcca 134 PANTHER PTHR33164 1 133 2.9E-30 T 14-09-2016 AY555_RS01110 f58577e93b7b934c202858bda74dbcca 134 SMART SM00347 23 123 4.5E-16 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AY555_RS01110 f58577e93b7b934c202858bda74dbcca 134 SUPERFAMILY SSF46785 2 133 2.55E-29 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS01110 f58577e93b7b934c202858bda74dbcca 134 Pfam PF01047 MarR family 30 88 2.4E-12 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AY555_RS01110 f58577e93b7b934c202858bda74dbcca 134 Gene3D G3DSA:1.10.10.10 2 133 9.3E-34 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS01110 f58577e93b7b934c202858bda74dbcca 134 PANTHER PTHR33164:SF8 1 133 2.9E-30 T 14-09-2016 AY555_RS01110 f58577e93b7b934c202858bda74dbcca 134 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 63 9.5E-10 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AY555_RS01110 f58577e93b7b934c202858bda74dbcca 134 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 9.5E-10 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AY555_RS01110 f58577e93b7b934c202858bda74dbcca 134 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 9.5E-10 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AY555_RS01110 f58577e93b7b934c202858bda74dbcca 134 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 9.5E-10 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AY555_RS09230 f64e6ef4a81f17e4f51a4f0a388cd9f3 165 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 18 154 3.8E-57 T 14-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AY555_RS09230 f64e6ef4a81f17e4f51a4f0a388cd9f3 165 Gene3D G3DSA:3.40.50.9100 17 160 8.5E-63 T 14-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AY555_RS09230 f64e6ef4a81f17e4f51a4f0a388cd9f3 165 PIRSF PIRSF001399 14 160 9.6E-61 T 14-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AY555_RS09230 f64e6ef4a81f17e4f51a4f0a388cd9f3 165 ProSitePatterns PS01029 Dehydroquinase class II signature. 21 38 - T 14-09-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AY555_RS09230 f64e6ef4a81f17e4f51a4f0a388cd9f3 165 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 165 66.061 T 14-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AY555_RS09230 f64e6ef4a81f17e4f51a4f0a388cd9f3 165 Pfam PF01220 Dehydroquinase class II 18 153 5.1E-57 T 14-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AY555_RS09230 f64e6ef4a81f17e4f51a4f0a388cd9f3 165 SUPERFAMILY SSF52304 17 162 6.41E-60 T 14-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AY555_RS09230 f64e6ef4a81f17e4f51a4f0a388cd9f3 165 PANTHER PTHR21272 13 163 1.3E-82 T 14-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AY555_RS09230 f64e6ef4a81f17e4f51a4f0a388cd9f3 165 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 18 146 3.0E-43 T 14-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AY555_RS00400 21b8221e02f4c9751aafe0a174727b6f 404 PRINTS PR00471 Acetate kinase family signature 8 19 1.6E-43 T 14-09-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AY555_RS00400 21b8221e02f4c9751aafe0a174727b6f 404 PRINTS PR00471 Acetate kinase family signature 204 225 1.6E-43 T 14-09-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AY555_RS00400 21b8221e02f4c9751aafe0a174727b6f 404 PRINTS PR00471 Acetate kinase family signature 323 339 1.6E-43 T 14-09-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AY555_RS00400 21b8221e02f4c9751aafe0a174727b6f 404 PRINTS PR00471 Acetate kinase family signature 301 314 1.6E-43 T 14-09-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AY555_RS00400 21b8221e02f4c9751aafe0a174727b6f 404 PRINTS PR00471 Acetate kinase family signature 378 390 1.6E-43 T 14-09-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AY555_RS00400 21b8221e02f4c9751aafe0a174727b6f 404 PRINTS PR00471 Acetate kinase family signature 174 187 1.6E-43 T 14-09-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AY555_RS00400 21b8221e02f4c9751aafe0a174727b6f 404 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 204 221 - T 14-09-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AY555_RS00400 21b8221e02f4c9751aafe0a174727b6f 404 PANTHER PTHR21060:SF15 4 404 6.0E-198 T 14-09-2016 AY555_RS00400 21b8221e02f4c9751aafe0a174727b6f 404 PIRSF PIRSF000722 4 401 2.8E-137 T 14-09-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AY555_RS00400 21b8221e02f4c9751aafe0a174727b6f 404 Gene3D G3DSA:3.30.420.40 156 359 8.6E-76 T 14-09-2016 AY555_RS00400 21b8221e02f4c9751aafe0a174727b6f 404 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 8 19 - T 14-09-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AY555_RS00400 21b8221e02f4c9751aafe0a174727b6f 404 Hamap MF_00020 Acetate kinase [ackA]. 1 400 173.859 T 14-09-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AY555_RS00400 21b8221e02f4c9751aafe0a174727b6f 404 PANTHER PTHR21060 4 404 6.0E-198 T 14-09-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AY555_RS00400 21b8221e02f4c9751aafe0a174727b6f 404 SUPERFAMILY SSF53067 7 196 3.3E-65 T 14-09-2016 AY555_RS00400 21b8221e02f4c9751aafe0a174727b6f 404 Pfam PF00871 Acetokinase family 8 390 1.7E-143 T 14-09-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AY555_RS00400 21b8221e02f4c9751aafe0a174727b6f 404 SUPERFAMILY SSF53067 158 397 2.41E-80 T 14-09-2016 AY555_RS00400 21b8221e02f4c9751aafe0a174727b6f 404 TIGRFAM TIGR00016 ackA: acetate kinase 5 397 1.4E-142 T 14-09-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AY555_RS03955 8f7eb184ffb710db29e1e666a91ac1e3 263 Pfam PF01553 Acyltransferase 60 179 4.0E-24 T 14-09-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AY555_RS03955 8f7eb184ffb710db29e1e666a91ac1e3 263 Gene3D G3DSA:3.40.1130.10 33 181 8.9E-11 T 14-09-2016 AY555_RS03955 8f7eb184ffb710db29e1e666a91ac1e3 263 PANTHER PTHR10434:SF8 11 183 2.9E-27 T 14-09-2016 AY555_RS03955 8f7eb184ffb710db29e1e666a91ac1e3 263 SMART SM00563 67 182 3.3E-30 T 14-09-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AY555_RS03955 8f7eb184ffb710db29e1e666a91ac1e3 263 PANTHER PTHR10434 11 183 2.9E-27 T 14-09-2016 AY555_RS03955 8f7eb184ffb710db29e1e666a91ac1e3 263 SUPERFAMILY SSF69593 11 252 3.01E-26 T 14-09-2016 AY555_RS01730 bfeabe4519192bf93033d59c73bc69ee 317 PANTHER PTHR22855 1 313 2.6E-110 T 14-09-2016 AY555_RS01730 bfeabe4519192bf93033d59c73bc69ee 317 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 313 2.6E-122 T 14-09-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AY555_RS01730 bfeabe4519192bf93033d59c73bc69ee 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 167 180 2.2E-38 T 14-09-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AY555_RS01730 bfeabe4519192bf93033d59c73bc69ee 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 195 204 2.2E-38 T 14-09-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AY555_RS01730 bfeabe4519192bf93033d59c73bc69ee 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 151 164 2.2E-38 T 14-09-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AY555_RS01730 bfeabe4519192bf93033d59c73bc69ee 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 132 148 2.2E-38 T 14-09-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AY555_RS01730 bfeabe4519192bf93033d59c73bc69ee 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 86 97 2.2E-38 T 14-09-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AY555_RS01730 bfeabe4519192bf93033d59c73bc69ee 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 111 129 2.2E-38 T 14-09-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AY555_RS01730 bfeabe4519192bf93033d59c73bc69ee 317 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 3 314 47.141 T 14-09-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AY555_RS01730 bfeabe4519192bf93033d59c73bc69ee 317 Gene3D G3DSA:3.90.226.10 54 272 2.7E-45 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AY555_RS01730 bfeabe4519192bf93033d59c73bc69ee 317 SUPERFAMILY SSF52096 3 313 1.31E-93 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AY555_RS01730 bfeabe4519192bf93033d59c73bc69ee 317 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 3 146 2.8E-59 T 14-09-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AY555_RS01730 bfeabe4519192bf93033d59c73bc69ee 317 PANTHER PTHR22855:SF42 1 313 2.6E-110 T 14-09-2016 AY555_RS02835 93e4d4bf846aefeed04da84d440af7ef 115 Pfam PF02498 BRO family, N-terminal domain 25 106 4.6E-25 T 14-09-2016 IPR003497 BRO N-terminal domain AY555_RS02835 93e4d4bf846aefeed04da84d440af7ef 115 SMART SM01040 24 109 1.4E-28 T 14-09-2016 IPR003497 BRO N-terminal domain AY555_RS02835 93e4d4bf846aefeed04da84d440af7ef 115 PANTHER PTHR36180 1 107 5.0E-21 T 14-09-2016 AY555_RS02835 93e4d4bf846aefeed04da84d440af7ef 115 PANTHER PTHR36180:SF2 1 107 5.0E-21 T 14-09-2016 AY555_RS00515 9d395278508d128c68515efa75d7f20c 215 PANTHER PTHR23117 10 203 3.8E-90 T 14-09-2016 AY555_RS00515 9d395278508d128c68515efa75d7f20c 215 Gene3D G3DSA:3.40.50.300 96 205 2.4E-47 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS00515 9d395278508d128c68515efa75d7f20c 215 Gene3D G3DSA:3.40.50.300 11 36 2.4E-47 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS00515 9d395278508d128c68515efa75d7f20c 215 Gene3D G3DSA:3.30.63.10 44 95 4.7E-26 T 14-09-2016 AY555_RS00515 9d395278508d128c68515efa75d7f20c 215 SMART SM00072 13 196 4.9E-68 T 14-09-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AY555_RS00515 9d395278508d128c68515efa75d7f20c 215 SUPERFAMILY SSF52540 12 199 1.0E-66 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS00515 9d395278508d128c68515efa75d7f20c 215 Hamap MF_00328 Guanylate kinase [gmk]. 12 196 35.886 T 14-09-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 AY555_RS00515 9d395278508d128c68515efa75d7f20c 215 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 15 193 1.7E-70 T 14-09-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 AY555_RS00515 9d395278508d128c68515efa75d7f20c 215 PANTHER PTHR23117:SF13 10 203 3.8E-90 T 14-09-2016 AY555_RS00515 9d395278508d128c68515efa75d7f20c 215 ProSitePatterns PS00856 Guanylate kinase-like signature. 48 65 - T 14-09-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 AY555_RS00515 9d395278508d128c68515efa75d7f20c 215 Pfam PF00625 Guanylate kinase 16 195 5.8E-50 T 14-09-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AY555_RS00675 1777fcf6a60c5953bb22a1fb4a2890d6 425 Pfam PF05036 Sporulation related domain 334 414 1.2E-10 T 14-09-2016 IPR007730 Sporulation-related domain GO:0042834 AY555_RS00675 1777fcf6a60c5953bb22a1fb4a2890d6 425 Gene3D G3DSA:3.30.70.1070 330 414 2.4E-5 T 14-09-2016 IPR007730 Sporulation-related domain GO:0042834 AY555_RS00675 1777fcf6a60c5953bb22a1fb4a2890d6 425 PANTHER PTHR21581 42 274 3.3E-58 T 14-09-2016 AY555_RS00675 1777fcf6a60c5953bb22a1fb4a2890d6 425 SUPERFAMILY SSF56601 33 272 3.46E-66 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AY555_RS00675 1777fcf6a60c5953bb22a1fb4a2890d6 425 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 36 257 3.0E-50 T 14-09-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AY555_RS00675 1777fcf6a60c5953bb22a1fb4a2890d6 425 Gene3D G3DSA:3.40.710.10 36 274 3.4E-77 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AY555_RS00675 1777fcf6a60c5953bb22a1fb4a2890d6 425 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 64 75 1.2E-11 T 14-09-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AY555_RS00675 1777fcf6a60c5953bb22a1fb4a2890d6 425 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 117 134 1.2E-11 T 14-09-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AY555_RS00675 1777fcf6a60c5953bb22a1fb4a2890d6 425 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 144 157 1.2E-11 T 14-09-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AY555_RS00675 1777fcf6a60c5953bb22a1fb4a2890d6 425 SUPERFAMILY SSF110997 334 414 5.36E-6 T 14-09-2016 IPR007730 Sporulation-related domain GO:0042834 AY555_RS00675 1777fcf6a60c5953bb22a1fb4a2890d6 425 PANTHER PTHR21581:SF3 42 274 3.3E-58 T 14-09-2016 AY555_RS09855 f5fc98efa7231c39053b38b7a333a0da 722 PANTHER PTHR32309:SF13 19 720 2.9E-92 T 14-09-2016 AY555_RS09855 f5fc98efa7231c39053b38b7a333a0da 722 SUPERFAMILY SSF52540 518 704 7.78E-27 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS09855 f5fc98efa7231c39053b38b7a333a0da 722 Gene3D G3DSA:3.40.50.300 518 713 1.2E-22 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS09855 f5fc98efa7231c39053b38b7a333a0da 722 PANTHER PTHR32309 19 720 2.9E-92 T 14-09-2016 AY555_RS09855 f5fc98efa7231c39053b38b7a333a0da 722 Pfam PF02706 Chain length determinant protein 19 187 3.2E-11 T 14-09-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 AY555_RS09855 f5fc98efa7231c39053b38b7a333a0da 722 Pfam PF13614 AAA domain 527 648 2.3E-11 T 14-09-2016 IPR025669 AAA domain AY555_RS05290 78a3dcef735607a2bffb4273826bc643 455 TIGRFAM TIGR01436 glu_cys_lig_pln: glutamate--cysteine ligase 11 452 1.7E-202 T 14-09-2016 IPR011556 Glutamate--cysteine ligase, plant GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 AY555_RS05290 78a3dcef735607a2bffb4273826bc643 455 SUPERFAMILY SSF55931 26 266 2.84E-68 T 14-09-2016 AY555_RS05290 78a3dcef735607a2bffb4273826bc643 455 SUPERFAMILY SSF55931 305 442 2.84E-68 T 14-09-2016 AY555_RS05290 78a3dcef735607a2bffb4273826bc643 455 PANTHER PTHR34378:SF1 2 455 1.5E-223 T 14-09-2016 AY555_RS05290 78a3dcef735607a2bffb4273826bc643 455 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 53 359 1.5E-92 T 14-09-2016 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AY555_RS05290 78a3dcef735607a2bffb4273826bc643 455 PIRSF PIRSF017901 1 453 3.6E-179 T 14-09-2016 AY555_RS05290 78a3dcef735607a2bffb4273826bc643 455 PANTHER PTHR34378 2 455 1.5E-223 T 14-09-2016 AY555_RS03115 ec717ae1f003d7064522548ebdf86477 307 Pfam PF01925 Sulfite exporter TauE/SafE 18 289 6.3E-50 T 14-09-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 AY555_RS03115 ec717ae1f003d7064522548ebdf86477 307 PANTHER PTHR30269:SF15 10 298 6.0E-77 T 14-09-2016 AY555_RS03115 ec717ae1f003d7064522548ebdf86477 307 PANTHER PTHR30269 10 298 6.0E-77 T 14-09-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 AY555_RS04585 3e9e5a41f801dbedb2195671d131476b 266 ProSitePatterns PS00211 ABC transporters family signature. 123 137 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AY555_RS04585 3e9e5a41f801dbedb2195671d131476b 266 PANTHER PTHR24220:SF466 8 245 4.6E-82 T 14-09-2016 AY555_RS04585 3e9e5a41f801dbedb2195671d131476b 266 PANTHER PTHR24220 8 245 4.6E-82 T 14-09-2016 AY555_RS04585 3e9e5a41f801dbedb2195671d131476b 266 SUPERFAMILY SSF52540 5 206 1.33E-50 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04585 3e9e5a41f801dbedb2195671d131476b 266 Pfam PF00005 ABC transporter 22 150 4.2E-25 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AY555_RS04585 3e9e5a41f801dbedb2195671d131476b 266 SMART SM00382 31 201 2.9E-10 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS04585 3e9e5a41f801dbedb2195671d131476b 266 Gene3D G3DSA:3.40.50.300 6 202 1.2E-47 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS09795 28693432db84c52708be153a7ffe9d0e 413 Hamap MF_00006 Argininosuccinate lyase [argH]. 4 412 36.942 T 14-09-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AY555_RS09795 28693432db84c52708be153a7ffe9d0e 413 TIGRFAM TIGR00838 argH: argininosuccinate lyase 5 411 2.5E-160 T 14-09-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AY555_RS09795 28693432db84c52708be153a7ffe9d0e 413 SUPERFAMILY SSF48557 6 409 2.51E-133 T 14-09-2016 IPR008948 L-Aspartase-like GO:0003824 AY555_RS09795 28693432db84c52708be153a7ffe9d0e 413 PRINTS PR00149 Fumarate lyase superfamily signature 104 122 1.8E-28 T 14-09-2016 IPR000362 Fumarate lyase family AY555_RS09795 28693432db84c52708be153a7ffe9d0e 413 PRINTS PR00149 Fumarate lyase superfamily signature 277 293 1.8E-28 T 14-09-2016 IPR000362 Fumarate lyase family AY555_RS09795 28693432db84c52708be153a7ffe9d0e 413 PRINTS PR00149 Fumarate lyase superfamily signature 149 167 1.8E-28 T 14-09-2016 IPR000362 Fumarate lyase family AY555_RS09795 28693432db84c52708be153a7ffe9d0e 413 PRINTS PR00149 Fumarate lyase superfamily signature 233 260 1.8E-28 T 14-09-2016 IPR000362 Fumarate lyase family AY555_RS09795 28693432db84c52708be153a7ffe9d0e 413 ProSitePatterns PS00163 Fumarate lyases signature. 277 286 - T 14-09-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 AY555_RS09795 28693432db84c52708be153a7ffe9d0e 413 Pfam PF00206 Lyase 8 302 2.0E-74 T 14-09-2016 IPR022761 Fumarate lyase, N-terminal AY555_RS09795 28693432db84c52708be153a7ffe9d0e 413 PRINTS PR00145 Argininosuccinate lyase family signature 233 257 1.8E-62 T 14-09-2016 AY555_RS09795 28693432db84c52708be153a7ffe9d0e 413 PRINTS PR00145 Argininosuccinate lyase family signature 195 211 1.8E-62 T 14-09-2016 AY555_RS09795 28693432db84c52708be153a7ffe9d0e 413 PRINTS PR00145 Argininosuccinate lyase family signature 312 331 1.8E-62 T 14-09-2016 AY555_RS09795 28693432db84c52708be153a7ffe9d0e 413 PRINTS PR00145 Argininosuccinate lyase family signature 144 164 1.8E-62 T 14-09-2016 AY555_RS09795 28693432db84c52708be153a7ffe9d0e 413 PRINTS PR00145 Argininosuccinate lyase family signature 103 125 1.8E-62 T 14-09-2016 AY555_RS09795 28693432db84c52708be153a7ffe9d0e 413 PRINTS PR00145 Argininosuccinate lyase family signature 277 293 1.8E-62 T 14-09-2016 AY555_RS09795 28693432db84c52708be153a7ffe9d0e 413 Gene3D G3DSA:1.10.275.10 4 108 6.3E-39 T 14-09-2016 IPR024083 Fumarase/histidase, N-terminal AY555_RS09795 28693432db84c52708be153a7ffe9d0e 413 Gene3D G3DSA:1.20.200.10 109 387 9.3E-96 T 14-09-2016 AY555_RS09795 28693432db84c52708be153a7ffe9d0e 413 Pfam PF14698 Argininosuccinate lyase C-terminal 365 408 1.7E-9 T 14-09-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AY555_RS09795 28693432db84c52708be153a7ffe9d0e 413 PANTHER PTHR11444 3 413 1.5E-187 T 14-09-2016 IPR000362 Fumarate lyase family AY555_RS09795 28693432db84c52708be153a7ffe9d0e 413 PANTHER PTHR11444:SF3 3 413 1.5E-187 T 14-09-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AY555_RS00225 197a045036f1372668fcacb1a90f076e 312 Pfam PF00700 Bacterial flagellin C-terminal helical region 229 310 1.0E-6 T 14-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AY555_RS00225 197a045036f1372668fcacb1a90f076e 312 Pfam PF00669 Bacterial flagellin N-terminal helical region 12 142 4.9E-9 T 14-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AY555_RS00225 197a045036f1372668fcacb1a90f076e 312 SUPERFAMILY SSF64518 6 312 1.31E-37 T 14-09-2016 AY555_RS00225 197a045036f1372668fcacb1a90f076e 312 Gene3D G3DSA:1.20.1330.10 65 173 3.2E-6 T 14-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AY555_RS00225 197a045036f1372668fcacb1a90f076e 312 Gene3D G3DSA:1.20.1330.10 214 266 3.2E-6 T 14-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AY555_RS05235 fdb76b43c78c40c16810e7913f79f000 248 Gene3D G3DSA:1.10.760.10 19 228 2.5E-30 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AY555_RS05235 fdb76b43c78c40c16810e7913f79f000 248 SUPERFAMILY SSF46626 21 177 2.81E-24 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AY555_RS05235 fdb76b43c78c40c16810e7913f79f000 248 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 10 238 5.4E-104 T 14-09-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO AY555_RS05235 fdb76b43c78c40c16810e7913f79f000 248 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 7 231 1.2E-91 T 14-09-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO AY555_RS05235 fdb76b43c78c40c16810e7913f79f000 248 PANTHER PTHR10422:SF23 21 163 3.7E-70 T 14-09-2016 AY555_RS05235 fdb76b43c78c40c16810e7913f79f000 248 PANTHER PTHR10422 21 163 3.7E-70 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AY555_RS01100 5fd6321196e66b64a352aecea3ec53da 119 SMART SM00450 16 113 5.3E-19 T 14-09-2016 IPR001763 Rhodanese-like domain AY555_RS01100 5fd6321196e66b64a352aecea3ec53da 119 Pfam PF00581 Rhodanese-like domain 26 108 3.9E-13 T 14-09-2016 IPR001763 Rhodanese-like domain AY555_RS01100 5fd6321196e66b64a352aecea3ec53da 119 Gene3D G3DSA:3.40.250.10 8 114 8.2E-25 T 14-09-2016 IPR001763 Rhodanese-like domain AY555_RS01100 5fd6321196e66b64a352aecea3ec53da 119 SUPERFAMILY SSF52821 10 113 3.8E-26 T 14-09-2016 IPR001763 Rhodanese-like domain AY555_RS07245 5f3cd1b747d9b7733af0c037447fb685 175 Pfam PF01584 CheW-like domain 28 163 5.9E-27 T 14-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AY555_RS07245 5f3cd1b747d9b7733af0c037447fb685 175 SMART SM00260 23 163 1.6E-27 T 14-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AY555_RS07245 5f3cd1b747d9b7733af0c037447fb685 175 SUPERFAMILY SSF50341 24 164 2.62E-28 T 14-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AY555_RS07245 5f3cd1b747d9b7733af0c037447fb685 175 PANTHER PTHR22617 28 163 2.8E-22 T 14-09-2016 AY555_RS07245 5f3cd1b747d9b7733af0c037447fb685 175 Gene3D G3DSA:2.40.50.180 66 101 7.0E-5 T 14-09-2016 AY555_RS01630 282b765cb9d1bfb19bedc34fe1c31a30 431 PANTHER PTHR22777 1 424 5.0E-137 T 14-09-2016 AY555_RS01630 282b765cb9d1bfb19bedc34fe1c31a30 431 SMART SM01091 344 422 5.5E-28 T 14-09-2016 IPR005170 Transporter-associated domain AY555_RS01630 282b765cb9d1bfb19bedc34fe1c31a30 431 Pfam PF00571 CBS domain 206 263 5.3E-5 T 14-09-2016 IPR000644 CBS domain AY555_RS01630 282b765cb9d1bfb19bedc34fe1c31a30 431 Pfam PF00571 CBS domain 284 329 1.7E-6 T 14-09-2016 IPR000644 CBS domain AY555_RS01630 282b765cb9d1bfb19bedc34fe1c31a30 431 Gene3D G3DSA:3.30.465.10 324 420 1.1E-25 T 14-09-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AY555_RS01630 282b765cb9d1bfb19bedc34fe1c31a30 431 SMART SM00116 281 329 1.1 T 14-09-2016 IPR000644 CBS domain AY555_RS01630 282b765cb9d1bfb19bedc34fe1c31a30 431 SMART SM00116 215 264 1.3 T 14-09-2016 IPR000644 CBS domain AY555_RS01630 282b765cb9d1bfb19bedc34fe1c31a30 431 Pfam PF01595 Domain of unknown function DUF21 6 180 4.6E-41 T 14-09-2016 IPR002550 Domain of unknown function DUF21 AY555_RS01630 282b765cb9d1bfb19bedc34fe1c31a30 431 Gene3D G3DSA:3.10.580.10 192 323 1.5E-21 T 14-09-2016 AY555_RS01630 282b765cb9d1bfb19bedc34fe1c31a30 431 SUPERFAMILY SSF54631 202 344 1.26E-33 T 14-09-2016 AY555_RS01630 282b765cb9d1bfb19bedc34fe1c31a30 431 SUPERFAMILY SSF56176 343 427 7.36E-23 T 14-09-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AY555_RS01630 282b765cb9d1bfb19bedc34fe1c31a30 431 Pfam PF03471 Transporter associated domain 346 420 5.5E-21 T 14-09-2016 IPR005170 Transporter-associated domain AY555_RS05950 ec8276a80bc07e9eac80529ad297162d 413 PRINTS PR01035 Tetracycline resistance protein signature 18 34 1.6E-5 T 14-09-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AY555_RS05950 ec8276a80bc07e9eac80529ad297162d 413 PRINTS PR01035 Tetracycline resistance protein signature 145 167 1.6E-5 T 14-09-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AY555_RS05950 ec8276a80bc07e9eac80529ad297162d 413 Gene3D G3DSA:1.20.1250.20 10 204 1.6E-29 T 14-09-2016 AY555_RS05950 ec8276a80bc07e9eac80529ad297162d 413 Gene3D G3DSA:1.20.1250.20 230 399 5.2E-13 T 14-09-2016 AY555_RS05950 ec8276a80bc07e9eac80529ad297162d 413 Pfam PF07690 Major Facilitator Superfamily 13 368 4.4E-41 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AY555_RS05950 ec8276a80bc07e9eac80529ad297162d 413 PANTHER PTHR23504:SF18 8 400 5.8E-63 T 14-09-2016 AY555_RS05950 ec8276a80bc07e9eac80529ad297162d 413 SUPERFAMILY SSF103473 9 398 1.96E-52 T 14-09-2016 IPR020846 Major facilitator superfamily domain AY555_RS05950 ec8276a80bc07e9eac80529ad297162d 413 PANTHER PTHR23504 8 400 5.8E-63 T 14-09-2016 AY555_RS04790 ab1fbc110b6d603aeff68f8f12de8198 427 PANTHER PTHR23508 5 385 1.2E-142 T 14-09-2016 AY555_RS04790 ab1fbc110b6d603aeff68f8f12de8198 427 Gene3D G3DSA:1.20.1250.20 237 407 5.2E-7 T 14-09-2016 AY555_RS04790 ab1fbc110b6d603aeff68f8f12de8198 427 Gene3D G3DSA:1.20.1250.20 9 208 3.1E-21 T 14-09-2016 AY555_RS04790 ab1fbc110b6d603aeff68f8f12de8198 427 PANTHER PTHR23508:SF5 5 385 1.2E-142 T 14-09-2016 AY555_RS04790 ab1fbc110b6d603aeff68f8f12de8198 427 Pfam PF07690 Major Facilitator Superfamily 54 378 6.7E-28 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AY555_RS04790 ab1fbc110b6d603aeff68f8f12de8198 427 SUPERFAMILY SSF103473 6 413 2.49E-52 T 14-09-2016 IPR020846 Major facilitator superfamily domain AY555_RS04790 ab1fbc110b6d603aeff68f8f12de8198 427 ProSitePatterns PS00217 Sugar transport proteins signature 2. 119 144 - T 14-09-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AY555_RS09375 b451cc466357c2ecea22a83061318ff8 722 PIRSF PIRSF005419 30 722 3.5E-240 T 14-09-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AY555_RS09375 b451cc466357c2ecea22a83061318ff8 722 PANTHER PTHR30161 25 722 0.0 T 14-09-2016 AY555_RS09375 b451cc466357c2ecea22a83061318ff8 722 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 46 722 5.8E-269 T 14-09-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 AY555_RS09375 b451cc466357c2ecea22a83061318ff8 722 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 167 183 1.9E-52 T 14-09-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AY555_RS09375 b451cc466357c2ecea22a83061318ff8 722 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 267 281 1.9E-52 T 14-09-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AY555_RS09375 b451cc466357c2ecea22a83061318ff8 722 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 100 119 1.9E-52 T 14-09-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AY555_RS09375 b451cc466357c2ecea22a83061318ff8 722 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 63 76 1.9E-52 T 14-09-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AY555_RS09375 b451cc466357c2ecea22a83061318ff8 722 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 216 233 1.9E-52 T 14-09-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AY555_RS09375 b451cc466357c2ecea22a83061318ff8 722 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 186 204 1.9E-52 T 14-09-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AY555_RS09375 b451cc466357c2ecea22a83061318ff8 722 PANTHER PTHR30161:SF1 25 722 0.0 T 14-09-2016 AY555_RS09375 b451cc466357c2ecea22a83061318ff8 722 Pfam PF00771 FHIPEP family 57 714 3.6E-257 T 14-09-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AY555_RS09620 ec09de658d5ca1b0dee24713342f6b15 398 Gene3D G3DSA:3.90.1150.10 282 393 7.1E-31 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AY555_RS09620 ec09de658d5ca1b0dee24713342f6b15 398 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 23 390 4.3E-129 T 14-09-2016 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 AY555_RS09620 ec09de658d5ca1b0dee24713342f6b15 398 Gene3D G3DSA:3.40.640.10 58 281 3.6E-83 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AY555_RS09620 ec09de658d5ca1b0dee24713342f6b15 398 PANTHER PTHR13693:SF53 10 395 1.1E-152 T 14-09-2016 AY555_RS09620 ec09de658d5ca1b0dee24713342f6b15 398 PANTHER PTHR13693 10 395 1.1E-152 T 14-09-2016 AY555_RS09620 ec09de658d5ca1b0dee24713342f6b15 398 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 245 254 - T 14-09-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 AY555_RS09620 ec09de658d5ca1b0dee24713342f6b15 398 SUPERFAMILY SSF53383 9 393 6.84E-110 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AY555_RS09620 ec09de658d5ca1b0dee24713342f6b15 398 Pfam PF00155 Aminotransferase class I and II 44 389 1.6E-58 T 14-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AY555_RS03065 6cb51eccd6fa1c1ea7a5faabe97ec7d0 332 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 56 322 5.7E-90 T 14-09-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AY555_RS03065 6cb51eccd6fa1c1ea7a5faabe97ec7d0 332 SMART SM00116 220 268 0.93 T 14-09-2016 IPR000644 CBS domain AY555_RS03065 6cb51eccd6fa1c1ea7a5faabe97ec7d0 332 SMART SM00116 283 331 0.0027 T 14-09-2016 IPR000644 CBS domain AY555_RS03065 6cb51eccd6fa1c1ea7a5faabe97ec7d0 332 SUPERFAMILY SSF53697 18 271 5.56E-62 T 14-09-2016 AY555_RS03065 6cb51eccd6fa1c1ea7a5faabe97ec7d0 332 Gene3D G3DSA:3.40.50.10490 27 202 3.6E-43 T 14-09-2016 AY555_RS03065 6cb51eccd6fa1c1ea7a5faabe97ec7d0 332 Pfam PF01380 SIS domain 52 183 8.4E-30 T 14-09-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 AY555_RS03065 6cb51eccd6fa1c1ea7a5faabe97ec7d0 332 PANTHER PTHR38418 15 210 2.5E-38 T 14-09-2016 AY555_RS03065 6cb51eccd6fa1c1ea7a5faabe97ec7d0 332 Gene3D G3DSA:3.10.580.10 203 329 2.7E-35 T 14-09-2016 AY555_RS03065 6cb51eccd6fa1c1ea7a5faabe97ec7d0 332 PIRSF PIRSF004692 5 332 1.3E-126 T 14-09-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AY555_RS03065 6cb51eccd6fa1c1ea7a5faabe97ec7d0 332 SUPERFAMILY SSF54631 272 329 2.01E-11 T 14-09-2016 AY555_RS03065 6cb51eccd6fa1c1ea7a5faabe97ec7d0 332 Pfam PF00571 CBS domain 220 267 7.9E-4 T 14-09-2016 IPR000644 CBS domain AY555_RS03065 6cb51eccd6fa1c1ea7a5faabe97ec7d0 332 Pfam PF00571 CBS domain 278 329 8.2E-11 T 14-09-2016 IPR000644 CBS domain AY555_RS03065 6cb51eccd6fa1c1ea7a5faabe97ec7d0 332 PANTHER PTHR38418:SF1 15 210 2.5E-38 T 14-09-2016 AY555_RS00180 abfc0f557451688d5b83fb319a9cac5c 363 PANTHER PTHR30381:SF0 7 363 6.6E-156 T 14-09-2016 AY555_RS00180 abfc0f557451688d5b83fb319a9cac5c 363 Pfam PF02119 Flagellar P-ring protein 20 362 9.8E-139 T 14-09-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AY555_RS00180 abfc0f557451688d5b83fb319a9cac5c 363 PANTHER PTHR30381 7 363 6.6E-156 T 14-09-2016 AY555_RS00180 abfc0f557451688d5b83fb319a9cac5c 363 Hamap MF_00416 Flagellar P-ring protein [flgI]. 1 363 36.825 T 14-09-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AY555_RS00180 abfc0f557451688d5b83fb319a9cac5c 363 PRINTS PR01010 Flagellar P-ring protein signature 55 70 2.7E-83 T 14-09-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AY555_RS00180 abfc0f557451688d5b83fb319a9cac5c 363 PRINTS PR01010 Flagellar P-ring protein signature 103 120 2.7E-83 T 14-09-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AY555_RS00180 abfc0f557451688d5b83fb319a9cac5c 363 PRINTS PR01010 Flagellar P-ring protein signature 81 100 2.7E-83 T 14-09-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AY555_RS00180 abfc0f557451688d5b83fb319a9cac5c 363 PRINTS PR01010 Flagellar P-ring protein signature 248 260 2.7E-83 T 14-09-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AY555_RS00180 abfc0f557451688d5b83fb319a9cac5c 363 PRINTS PR01010 Flagellar P-ring protein signature 20 35 2.7E-83 T 14-09-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AY555_RS00180 abfc0f557451688d5b83fb319a9cac5c 363 PRINTS PR01010 Flagellar P-ring protein signature 186 204 2.7E-83 T 14-09-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AY555_RS00180 abfc0f557451688d5b83fb319a9cac5c 363 PRINTS PR01010 Flagellar P-ring protein signature 35 50 2.7E-83 T 14-09-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AY555_RS00180 abfc0f557451688d5b83fb319a9cac5c 363 PRINTS PR01010 Flagellar P-ring protein signature 120 138 2.7E-83 T 14-09-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AY555_RS00180 abfc0f557451688d5b83fb319a9cac5c 363 PRINTS PR01010 Flagellar P-ring protein signature 160 178 2.7E-83 T 14-09-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AY555_RS04490 abf213a545930059d700351d6bdeebe2 381 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 70 286 1.8E-17 T 14-09-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AY555_RS04490 abf213a545930059d700351d6bdeebe2 381 PANTHER PTHR30469:SF0 3 379 1.4E-108 T 14-09-2016 AY555_RS04490 abf213a545930059d700351d6bdeebe2 381 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 367 2.4E-78 T 14-09-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AY555_RS04490 abf213a545930059d700351d6bdeebe2 381 Gene3D G3DSA:2.40.50.100 67 99 4.5E-15 T 14-09-2016 AY555_RS04490 abf213a545930059d700351d6bdeebe2 381 Gene3D G3DSA:2.40.50.100 174 206 4.5E-15 T 14-09-2016 AY555_RS04490 abf213a545930059d700351d6bdeebe2 381 PANTHER PTHR30469 3 379 1.4E-108 T 14-09-2016 AY555_RS04490 abf213a545930059d700351d6bdeebe2 381 SUPERFAMILY SSF111369 56 291 6.54E-51 T 14-09-2016 AY555_RS07190 5c139a01313beb4b15716fb345ddbbbd 262 SUPERFAMILY SSF53474 4 260 1.99E-52 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AY555_RS07190 5c139a01313beb4b15716fb345ddbbbd 262 PRINTS PR00412 Epoxide hydrolase signature 39 54 2.1E-8 T 14-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AY555_RS07190 5c139a01313beb4b15716fb345ddbbbd 262 PRINTS PR00412 Epoxide hydrolase signature 97 110 2.1E-8 T 14-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AY555_RS07190 5c139a01313beb4b15716fb345ddbbbd 262 PRINTS PR00412 Epoxide hydrolase signature 83 96 2.1E-8 T 14-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AY555_RS07190 5c139a01313beb4b15716fb345ddbbbd 262 PRINTS PR00412 Epoxide hydrolase signature 236 258 2.1E-8 T 14-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AY555_RS07190 5c139a01313beb4b15716fb345ddbbbd 262 Gene3D G3DSA:3.40.50.1820 4 260 6.9E-52 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AY555_RS07190 5c139a01313beb4b15716fb345ddbbbd 262 PANTHER PTHR10992:SF768 3 261 6.9E-80 T 14-09-2016 AY555_RS07190 5c139a01313beb4b15716fb345ddbbbd 262 Pfam PF00561 alpha/beta hydrolase fold 14 247 8.2E-24 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AY555_RS07190 5c139a01313beb4b15716fb345ddbbbd 262 PRINTS PR00111 Alpha/beta hydrolase fold signature 83 96 1.5E-9 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AY555_RS07190 5c139a01313beb4b15716fb345ddbbbd 262 PRINTS PR00111 Alpha/beta hydrolase fold signature 97 110 1.5E-9 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AY555_RS07190 5c139a01313beb4b15716fb345ddbbbd 262 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 1.5E-9 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AY555_RS07190 5c139a01313beb4b15716fb345ddbbbd 262 PANTHER PTHR10992 3 261 6.9E-80 T 14-09-2016 AY555_RS03745 103cc697885b325755b53bdc1eab98c3 125 PANTHER PTHR11780 11 108 2.0E-25 T 14-09-2016 AY555_RS03745 103cc697885b325755b53bdc1eab98c3 125 SUPERFAMILY SSF52833 10 108 3.47E-26 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS03745 103cc697885b325755b53bdc1eab98c3 125 Gene3D G3DSA:3.40.30.10 10 110 2.8E-31 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS03745 103cc697885b325755b53bdc1eab98c3 125 PANTHER PTHR11780:SF12 11 108 2.0E-25 T 14-09-2016 AY555_RS02270 24b9267ccebd91bc3a1e73e7d4e22554 175 PANTHER PTHR11544 20 171 3.1E-14 T 14-09-2016 AY555_RS02270 24b9267ccebd91bc3a1e73e7d4e22554 175 Gene3D G3DSA:2.40.50.140 109 173 9.7E-20 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS02270 24b9267ccebd91bc3a1e73e7d4e22554 175 Gene3D G3DSA:2.40.50.140 17 78 6.7E-20 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS02270 24b9267ccebd91bc3a1e73e7d4e22554 175 PANTHER PTHR11544:SF43 20 171 3.1E-14 T 14-09-2016 AY555_RS02270 24b9267ccebd91bc3a1e73e7d4e22554 175 SUPERFAMILY SSF50249 16 80 1.48E-16 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS02270 24b9267ccebd91bc3a1e73e7d4e22554 175 PRINTS PR00050 Cold shock protein signature 39 48 5.9E-9 T 14-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AY555_RS02270 24b9267ccebd91bc3a1e73e7d4e22554 175 PRINTS PR00050 Cold shock protein signature 54 72 5.9E-9 T 14-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AY555_RS02270 24b9267ccebd91bc3a1e73e7d4e22554 175 PRINTS PR00050 Cold shock protein signature 18 33 5.9E-9 T 14-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AY555_RS02270 24b9267ccebd91bc3a1e73e7d4e22554 175 SMART SM00357 17 81 6.5E-11 T 14-09-2016 IPR011129 Cold shock protein GO:0003676 AY555_RS02270 24b9267ccebd91bc3a1e73e7d4e22554 175 SMART SM00357 110 174 8.7E-14 T 14-09-2016 IPR011129 Cold shock protein GO:0003676 AY555_RS02270 24b9267ccebd91bc3a1e73e7d4e22554 175 Pfam PF00313 'Cold-shock' DNA-binding domain 110 172 8.7E-16 T 14-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AY555_RS02270 24b9267ccebd91bc3a1e73e7d4e22554 175 Pfam PF00313 'Cold-shock' DNA-binding domain 17 78 1.1E-15 T 14-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AY555_RS02270 24b9267ccebd91bc3a1e73e7d4e22554 175 SUPERFAMILY SSF50249 108 173 1.99E-16 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS01445 6231e532638aecd5acdeefe54f1d4676 366 Gene3D G3DSA:3.40.50.1820 242 328 1.5E-4 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AY555_RS01445 6231e532638aecd5acdeefe54f1d4676 366 SUPERFAMILY SSF53474 28 345 9.29E-71 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AY555_RS01445 6231e532638aecd5acdeefe54f1d4676 366 Pfam PF10503 Esterase PHB depolymerase 261 324 7.6E-5 T 14-09-2016 IPR010126 Esterase, PHB depolymerase GO:0005576 AY555_RS01445 6231e532638aecd5acdeefe54f1d4676 366 Gene3D G3DSA:3.40.50.1820 113 177 2.0E-8 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AY555_RS01445 6231e532638aecd5acdeefe54f1d4676 366 Gene3D G3DSA:3.40.50.1820 31 69 2.0E-8 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AY555_RS03490 3e637b213bf324bd3fc0ee0f3fef3760 230 PANTHER PTHR26402 5 230 1.1E-69 T 14-09-2016 AY555_RS03490 3e637b213bf324bd3fc0ee0f3fef3760 230 Pfam PF00072 Response regulator receiver domain 7 120 8.9E-25 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS03490 3e637b213bf324bd3fc0ee0f3fef3760 230 SUPERFAMILY SSF52172 4 131 1.99E-37 T 14-09-2016 IPR011006 CheY-like superfamily AY555_RS03490 3e637b213bf324bd3fc0ee0f3fef3760 230 PANTHER PTHR26402:SF50 5 230 1.1E-69 T 14-09-2016 AY555_RS03490 3e637b213bf324bd3fc0ee0f3fef3760 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 228 1.3E-18 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AY555_RS03490 3e637b213bf324bd3fc0ee0f3fef3760 230 SMART SM00448 5 120 1.7E-34 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS03490 3e637b213bf324bd3fc0ee0f3fef3760 230 Gene3D G3DSA:3.40.50.2300 6 130 2.3E-36 T 14-09-2016 AY555_RS03490 3e637b213bf324bd3fc0ee0f3fef3760 230 SMART SM00862 154 228 2.8E-17 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AY555_RS03490 3e637b213bf324bd3fc0ee0f3fef3760 230 SUPERFAMILY SSF46894 128 228 8.79E-18 T 14-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AY555_RS03490 3e637b213bf324bd3fc0ee0f3fef3760 230 Gene3D G3DSA:1.10.10.10 131 229 7.4E-21 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS09200 3baec9211275e8387f84e6d4af3a40e3 429 SUPERFAMILY SSF52540 1 423 4.89E-166 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS09200 3baec9211275e8387f84e6d4af3a40e3 429 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 429 205.862 T 14-09-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 AY555_RS09200 3baec9211275e8387f84e6d4af3a40e3 429 Gene3D G3DSA:1.10.300.10 101 194 6.4E-32 T 14-09-2016 AY555_RS09200 3baec9211275e8387f84e6d4af3a40e3 429 Pfam PF00709 Adenylosuccinate synthetase 4 421 6.9E-168 T 14-09-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 AY555_RS09200 3baec9211275e8387f84e6d4af3a40e3 429 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 427 2.3E-155 T 14-09-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 AY555_RS09200 3baec9211275e8387f84e6d4af3a40e3 429 SMART SM00788 3 422 9.7E-277 T 14-09-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 AY555_RS09200 3baec9211275e8387f84e6d4af3a40e3 429 Gene3D G3DSA:3.90.170.10 265 423 7.1E-69 T 14-09-2016 AY555_RS09200 3baec9211275e8387f84e6d4af3a40e3 429 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 132 143 - T 14-09-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 AY555_RS09200 3baec9211275e8387f84e6d4af3a40e3 429 PANTHER PTHR11846 3 426 1.2E-215 T 14-09-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 AY555_RS09200 3baec9211275e8387f84e6d4af3a40e3 429 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 14-09-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 AY555_RS09200 3baec9211275e8387f84e6d4af3a40e3 429 Gene3D G3DSA:3.40.440.10 195 264 4.5E-65 T 14-09-2016 AY555_RS09200 3baec9211275e8387f84e6d4af3a40e3 429 Gene3D G3DSA:3.40.440.10 1 92 4.5E-65 T 14-09-2016 AY555_RS06755 2a8741b427d579adea1bb00b940e7379 1026 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 73 995 16.759 T 14-09-2016 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 AY555_RS06755 2a8741b427d579adea1bb00b940e7379 1026 SUPERFAMILY SSF81593 859 1004 5.49E-29 T 14-09-2016 AY555_RS06755 2a8741b427d579adea1bb00b940e7379 1026 PANTHER PTHR30621 72 1008 1.4E-230 T 14-09-2016 AY555_RS06755 2a8741b427d579adea1bb00b940e7379 1026 Pfam PF08335 GlnD PII-uridylyltransferase 344 484 2.9E-39 T 14-09-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AY555_RS06755 2a8741b427d579adea1bb00b940e7379 1026 Pfam PF08335 GlnD PII-uridylyltransferase 870 1004 4.4E-9 T 14-09-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AY555_RS06755 2a8741b427d579adea1bb00b940e7379 1026 SUPERFAMILY SSF81301 66 331 4.99E-64 T 14-09-2016 AY555_RS06755 2a8741b427d579adea1bb00b940e7379 1026 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 78 321 5.8E-61 T 14-09-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AY555_RS06755 2a8741b427d579adea1bb00b940e7379 1026 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 602 843 3.4E-58 T 14-09-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AY555_RS06755 2a8741b427d579adea1bb00b940e7379 1026 Gene3D G3DSA:3.30.460.10 689 845 7.0E-47 T 14-09-2016 AY555_RS06755 2a8741b427d579adea1bb00b940e7379 1026 Gene3D G3DSA:3.30.460.10 159 330 5.6E-49 T 14-09-2016 AY555_RS06755 2a8741b427d579adea1bb00b940e7379 1026 SUPERFAMILY SSF81593 333 485 2.28E-41 T 14-09-2016 AY555_RS06755 2a8741b427d579adea1bb00b940e7379 1026 SUPERFAMILY SSF81301 574 849 1.23E-66 T 14-09-2016 AY555_RS08655 45f2e34b45eed577211eace033efa296 1166 PANTHER PTHR14025 394 1152 0.0 T 14-09-2016 AY555_RS08655 45f2e34b45eed577211eace033efa296 1166 SUPERFAMILY SSF52540 6 349 1.53E-90 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08655 45f2e34b45eed577211eace033efa296 1166 SUPERFAMILY SSF52540 357 475 7.3E-17 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08655 45f2e34b45eed577211eace033efa296 1166 SUPERFAMILY SSF52540 533 792 2.0E-56 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08655 45f2e34b45eed577211eace033efa296 1166 SMART SM00487 608 798 1.2E-33 T 14-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AY555_RS08655 45f2e34b45eed577211eace033efa296 1166 SUPERFAMILY SSF143517 1009 1158 1.83E-38 T 14-09-2016 AY555_RS08655 45f2e34b45eed577211eace033efa296 1166 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 24 1158 27.695 T 14-09-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AY555_RS08655 45f2e34b45eed577211eace033efa296 1166 Pfam PF00270 DEAD/DEAH box helicase 613 773 1.1E-17 T 14-09-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AY555_RS08655 45f2e34b45eed577211eace033efa296 1166 SMART SM01058 488 584 2.1E-39 T 14-09-2016 IPR003711 CarD-like/TRCF domain AY555_RS08655 45f2e34b45eed577211eace033efa296 1166 Gene3D G3DSA:3.40.50.300 597 794 2.9E-51 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08655 45f2e34b45eed577211eace033efa296 1166 Gene3D G3DSA:3.40.50.300 809 971 1.9E-33 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08655 45f2e34b45eed577211eace033efa296 1166 Pfam PF02559 CarD-like/TRCF domain 489 581 1.3E-22 T 14-09-2016 IPR003711 CarD-like/TRCF domain AY555_RS08655 45f2e34b45eed577211eace033efa296 1166 Pfam PF00271 Helicase conserved C-terminal domain 813 917 1.2E-18 T 14-09-2016 IPR001650 Helicase, C-terminal AY555_RS08655 45f2e34b45eed577211eace033efa296 1166 Pfam PF03461 TRCF domain 1020 1111 6.2E-24 T 14-09-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AY555_RS08655 45f2e34b45eed577211eace033efa296 1166 PANTHER PTHR14025:SF21 394 1152 0.0 T 14-09-2016 AY555_RS08655 45f2e34b45eed577211eace033efa296 1166 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 143 1091 2.6E-301 T 14-09-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AY555_RS08655 45f2e34b45eed577211eace033efa296 1166 SUPERFAMILY SSF52540 790 997 1.3E-46 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08655 45f2e34b45eed577211eace033efa296 1166 SUPERFAMILY SSF141259 480 556 1.83E-20 T 14-09-2016 IPR003711 CarD-like/TRCF domain AY555_RS08655 45f2e34b45eed577211eace033efa296 1166 Gene3D G3DSA:3.30.2060.10 129 205 7.8E-13 T 14-09-2016 AY555_RS08655 45f2e34b45eed577211eace033efa296 1166 SMART SM00982 1018 1118 4.3E-42 T 14-09-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AY555_RS08655 45f2e34b45eed577211eace033efa296 1166 SMART SM00490 834 918 3.1E-20 T 14-09-2016 IPR001650 Helicase, C-terminal AY555_RS08905 a29fbe55cb8338f81c67ac33e4a0bd19 69 Gene3D G3DSA:3.30.70.100 1 66 3.0E-21 T 14-09-2016 AY555_RS08905 a29fbe55cb8338f81c67ac33e4a0bd19 69 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 37 - T 14-09-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AY555_RS08905 a29fbe55cb8338f81c67ac33e4a0bd19 69 SUPERFAMILY SSF55008 1 67 2.75E-19 T 14-09-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AY555_RS08905 a29fbe55cb8338f81c67ac33e4a0bd19 69 Pfam PF00403 Heavy-metal-associated domain 5 65 3.2E-17 T 14-09-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AY555_RS00990 52211a765d20f3dd45a22ca71506fac3 123 PANTHER PTHR11652 1 116 2.6E-78 T 14-09-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00990 52211a765d20f3dd45a22ca71506fac3 123 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 14-09-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00990 52211a765d20f3dd45a22ca71506fac3 123 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 2.2E-68 T 14-09-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AY555_RS00990 52211a765d20f3dd45a22ca71506fac3 123 SUPERFAMILY SSF50249 2 123 5.65E-53 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS00990 52211a765d20f3dd45a22ca71506fac3 123 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 40.118 T 14-09-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AY555_RS00990 52211a765d20f3dd45a22ca71506fac3 123 PRINTS PR01034 Ribosomal protein S12 signature 27 42 5.0E-61 T 14-09-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AY555_RS00990 52211a765d20f3dd45a22ca71506fac3 123 PRINTS PR01034 Ribosomal protein S12 signature 42 57 5.0E-61 T 14-09-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AY555_RS00990 52211a765d20f3dd45a22ca71506fac3 123 PRINTS PR01034 Ribosomal protein S12 signature 58 77 5.0E-61 T 14-09-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AY555_RS00990 52211a765d20f3dd45a22ca71506fac3 123 PRINTS PR01034 Ribosomal protein S12 signature 94 110 5.0E-61 T 14-09-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AY555_RS00990 52211a765d20f3dd45a22ca71506fac3 123 PRINTS PR01034 Ribosomal protein S12 signature 110 122 5.0E-61 T 14-09-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AY555_RS00990 52211a765d20f3dd45a22ca71506fac3 123 PRINTS PR01034 Ribosomal protein S12 signature 77 94 5.0E-61 T 14-09-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AY555_RS00990 52211a765d20f3dd45a22ca71506fac3 123 Pfam PF00164 Ribosomal protein S12/S23 3 123 1.8E-43 T 14-09-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00990 52211a765d20f3dd45a22ca71506fac3 123 Gene3D G3DSA:2.40.50.140 1 123 1.1E-66 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS00990 52211a765d20f3dd45a22ca71506fac3 123 PIRSF PIRSF002133 1 123 2.0E-54 T 14-09-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS07065 ea16af9a4490ef68c8d79dd9bb1b5068 423 Pfam PF01266 FAD dependent oxidoreductase 3 398 5.8E-61 T 14-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AY555_RS07065 ea16af9a4490ef68c8d79dd9bb1b5068 423 Gene3D G3DSA:3.50.50.60 108 130 4.0E-45 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS07065 ea16af9a4490ef68c8d79dd9bb1b5068 423 Gene3D G3DSA:3.50.50.60 360 416 4.0E-45 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS07065 ea16af9a4490ef68c8d79dd9bb1b5068 423 Gene3D G3DSA:3.50.50.60 1 58 4.0E-45 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS07065 ea16af9a4490ef68c8d79dd9bb1b5068 423 Gene3D G3DSA:3.50.50.60 191 269 4.0E-45 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS07065 ea16af9a4490ef68c8d79dd9bb1b5068 423 PANTHER PTHR13847:SF148 1 63 4.6E-185 T 14-09-2016 AY555_RS07065 ea16af9a4490ef68c8d79dd9bb1b5068 423 PANTHER PTHR13847 1 63 4.6E-185 T 14-09-2016 AY555_RS07065 ea16af9a4490ef68c8d79dd9bb1b5068 423 PANTHER PTHR13847 107 416 4.6E-185 T 14-09-2016 AY555_RS07065 ea16af9a4490ef68c8d79dd9bb1b5068 423 SUPERFAMILY SSF51905 1 54 1.19E-48 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS07065 ea16af9a4490ef68c8d79dd9bb1b5068 423 SUPERFAMILY SSF51905 360 417 1.19E-48 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS07065 ea16af9a4490ef68c8d79dd9bb1b5068 423 SUPERFAMILY SSF51905 107 270 1.19E-48 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS07065 ea16af9a4490ef68c8d79dd9bb1b5068 423 PANTHER PTHR13847:SF148 107 416 4.6E-185 T 14-09-2016 AY555_RS07065 ea16af9a4490ef68c8d79dd9bb1b5068 423 SUPERFAMILY SSF54373 270 360 6.67E-17 T 14-09-2016 AY555_RS07065 ea16af9a4490ef68c8d79dd9bb1b5068 423 Gene3D G3DSA:3.30.9.10 270 359 4.6E-14 T 14-09-2016 AY555_RS07065 ea16af9a4490ef68c8d79dd9bb1b5068 423 Gene3D G3DSA:3.30.9.10 136 190 4.6E-14 T 14-09-2016 AY555_RS07065 ea16af9a4490ef68c8d79dd9bb1b5068 423 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 47.317 T 14-09-2016 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 UniPathway: UPA00043 AY555_RS07655 32f3b77aeebb003910155aaae36173a9 308 PANTHER PTHR32196 1 305 2.7E-109 T 14-09-2016 AY555_RS07655 32f3b77aeebb003910155aaae36173a9 308 PANTHER PTHR32196:SF27 1 305 2.7E-109 T 14-09-2016 AY555_RS07655 32f3b77aeebb003910155aaae36173a9 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 250 1.2E-28 T 14-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AY555_RS04825 8ffa72d40fd585bd8af0f66fcdb27e49 511 PANTHER PTHR15184 1 494 0.0 T 14-09-2016 AY555_RS04825 8ffa72d40fd585bd8af0f66fcdb27e49 511 SUPERFAMILY SSF52540 96 379 2.48E-99 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04825 8ffa72d40fd585bd8af0f66fcdb27e49 511 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 364 373 - T 14-09-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AY555_RS04825 8ffa72d40fd585bd8af0f66fcdb27e49 511 SUPERFAMILY SSF50615 10 94 2.12E-29 T 14-09-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AY555_RS04825 8ffa72d40fd585bd8af0f66fcdb27e49 511 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 25 91 3.2E-17 T 14-09-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AY555_RS04825 8ffa72d40fd585bd8af0f66fcdb27e49 511 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 373 2.4E-74 T 14-09-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AY555_RS04825 8ffa72d40fd585bd8af0f66fcdb27e49 511 Gene3D G3DSA:3.40.50.300 94 380 6.8E-121 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04825 8ffa72d40fd585bd8af0f66fcdb27e49 511 Gene3D G3DSA:1.20.150.20 381 509 1.1E-54 T 14-09-2016 AY555_RS04825 8ffa72d40fd585bd8af0f66fcdb27e49 511 SUPERFAMILY SSF47917 381 509 5.76E-47 T 14-09-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AY555_RS04825 8ffa72d40fd585bd8af0f66fcdb27e49 511 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 510 1.3E-249 T 14-09-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AY555_RS04825 8ffa72d40fd585bd8af0f66fcdb27e49 511 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 510 51.01 T 14-09-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AY555_RS04825 8ffa72d40fd585bd8af0f66fcdb27e49 511 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 380 503 2.6E-48 T 14-09-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AY555_RS04825 8ffa72d40fd585bd8af0f66fcdb27e49 511 PIRSF PIRSF039088 1 511 1.6E-277 T 14-09-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AY555_RS04825 8ffa72d40fd585bd8af0f66fcdb27e49 511 PANTHER PTHR15184:SF3 1 494 0.0 T 14-09-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AY555_RS04825 8ffa72d40fd585bd8af0f66fcdb27e49 511 Gene3D G3DSA:2.40.30.20 1 92 3.7E-40 T 14-09-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AY555_RS00105 4f4c66f19c85ce4278c3d0ad8d6c18a3 236 SUPERFAMILY SSF103088 121 220 3.92E-14 T 14-09-2016 IPR006665 OmpA-like domain AY555_RS00105 4f4c66f19c85ce4278c3d0ad8d6c18a3 236 Gene3D G3DSA:3.30.1330.60 115 216 2.3E-13 T 14-09-2016 IPR006665 OmpA-like domain AY555_RS00105 4f4c66f19c85ce4278c3d0ad8d6c18a3 236 Pfam PF00691 OmpA family 143 215 3.0E-6 T 14-09-2016 IPR006665 OmpA-like domain AY555_RS00105 4f4c66f19c85ce4278c3d0ad8d6c18a3 236 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 22 62 3.9E-9 T 14-09-2016 IPR025713 Motility protein B, N-terminal domain AY555_RS06950 6f9d4d4a6ff16220581cf53a5c58e1cf 523 Pfam PF02646 RmuC family 189 485 3.6E-101 T 14-09-2016 IPR003798 DNA recombination RmuC AY555_RS06950 6f9d4d4a6ff16220581cf53a5c58e1cf 523 PANTHER PTHR30563 18 518 1.4E-95 T 14-09-2016 AY555_RS05570 30729af4d318729fdc450dc33ca8da4b 142 SUPERFAMILY SSF47413 25 97 2.04E-13 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AY555_RS05570 30729af4d318729fdc450dc33ca8da4b 142 Pfam PF01381 Helix-turn-helix 35 87 1.1E-7 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AY555_RS05570 30729af4d318729fdc450dc33ca8da4b 142 PANTHER PTHR10245 2 92 1.0E-13 T 14-09-2016 AY555_RS05570 30729af4d318729fdc450dc33ca8da4b 142 PANTHER PTHR10245:SF38 2 92 1.0E-13 T 14-09-2016 AY555_RS05570 30729af4d318729fdc450dc33ca8da4b 142 Gene3D G3DSA:1.10.260.40 27 94 1.8E-12 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AY555_RS05570 30729af4d318729fdc450dc33ca8da4b 142 SMART SM00530 34 89 1.4E-6 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AY555_RS02095 afd01e30c459f0b2bba9eedd254dc775 163 Gene3D G3DSA:2.60.40.420 43 162 3.4E-30 T 14-09-2016 IPR008972 Cupredoxin AY555_RS02095 afd01e30c459f0b2bba9eedd254dc775 163 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 60 161 8.4E-8 T 14-09-2016 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 AY555_RS02095 afd01e30c459f0b2bba9eedd254dc775 163 SUPERFAMILY SSF49503 51 161 1.6E-28 T 14-09-2016 IPR008972 Cupredoxin AY555_RS02095 afd01e30c459f0b2bba9eedd254dc775 163 ProSitePatterns PS00079 Multicopper oxidases signature 1. 139 159 - T 14-09-2016 IPR033138 Multicopper oxidases, conserved site AY555_RS03800 ddfc8680bf05c890456cb02c8a6946d7 182 Gene3D G3DSA:3.60.20.10 12 182 1.1E-81 T 14-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AY555_RS03800 ddfc8680bf05c890456cb02c8a6946d7 182 SUPERFAMILY SSF56235 8 181 7.53E-57 T 14-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AY555_RS03800 ddfc8680bf05c890456cb02c8a6946d7 182 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 11 182 39.492 T 14-09-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AY555_RS03800 ddfc8680bf05c890456cb02c8a6946d7 182 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 12 182 5.4E-81 T 14-09-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AY555_RS03800 ddfc8680bf05c890456cb02c8a6946d7 182 Pfam PF00227 Proteasome subunit 10 179 9.3E-23 T 14-09-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 AY555_RS03800 ddfc8680bf05c890456cb02c8a6946d7 182 PIRSF PIRSF039093 6 182 1.3E-82 T 14-09-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AY555_RS03800 ddfc8680bf05c890456cb02c8a6946d7 182 PANTHER PTHR32194 1 182 1.1E-116 T 14-09-2016 AY555_RS05120 0da5d5f1f4165e1a0df76c1b9d532b5d 275 Pfam PF12146 Serine aminopeptidase, S33 40 148 3.8E-12 T 14-09-2016 IPR022742 Serine aminopeptidase, S33 AY555_RS05120 0da5d5f1f4165e1a0df76c1b9d532b5d 275 Gene3D G3DSA:3.40.50.1820 193 262 3.1E-38 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AY555_RS05120 0da5d5f1f4165e1a0df76c1b9d532b5d 275 Gene3D G3DSA:3.40.50.1820 39 145 3.1E-38 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AY555_RS05120 0da5d5f1f4165e1a0df76c1b9d532b5d 275 SUPERFAMILY SSF53474 12 248 1.54E-39 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AY555_RS05120 0da5d5f1f4165e1a0df76c1b9d532b5d 275 PANTHER PTHR16138 18 268 1.8E-95 T 14-09-2016 AY555_RS00360 92f7ce16f3709d5cb8251bf0bfe84a87 909 SUPERFAMILY SSF55785 250 363 1.38E-5 T 14-09-2016 IPR000014 PAS domain AY555_RS00360 92f7ce16f3709d5cb8251bf0bfe84a87 909 SMART SM00388 676 745 5.5E-21 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS00360 92f7ce16f3709d5cb8251bf0bfe84a87 909 Pfam PF12860 PAS fold 392 506 8.2E-11 T 14-09-2016 AY555_RS00360 92f7ce16f3709d5cb8251bf0bfe84a87 909 Pfam PF00512 His Kinase A (phospho-acceptor) domain 676 745 3.1E-17 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS00360 92f7ce16f3709d5cb8251bf0bfe84a87 909 SMART SM00387 791 904 1.1E-37 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS00360 92f7ce16f3709d5cb8251bf0bfe84a87 909 SUPERFAMILY SSF55785 397 509 1.17E-6 T 14-09-2016 IPR000014 PAS domain AY555_RS00360 92f7ce16f3709d5cb8251bf0bfe84a87 909 PRINTS PR00344 Bacterial sensor protein C-terminal signature 829 843 3.6E-13 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS00360 92f7ce16f3709d5cb8251bf0bfe84a87 909 PRINTS PR00344 Bacterial sensor protein C-terminal signature 864 882 3.6E-13 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS00360 92f7ce16f3709d5cb8251bf0bfe84a87 909 PRINTS PR00344 Bacterial sensor protein C-terminal signature 888 901 3.6E-13 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS00360 92f7ce16f3709d5cb8251bf0bfe84a87 909 Gene3D G3DSA:3.30.450.20 353 500 1.8E-5 T 14-09-2016 AY555_RS00360 92f7ce16f3709d5cb8251bf0bfe84a87 909 SUPERFAMILY SSF47384 662 746 1.22E-19 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS00360 92f7ce16f3709d5cb8251bf0bfe84a87 909 Gene3D G3DSA:3.30.565.10 732 901 9.8E-42 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS00360 92f7ce16f3709d5cb8251bf0bfe84a87 909 Gene3D G3DSA:3.30.450.20 228 352 2.0E-6 T 14-09-2016 AY555_RS00360 92f7ce16f3709d5cb8251bf0bfe84a87 909 PANTHER PTHR24423 351 448 3.6E-89 T 14-09-2016 AY555_RS00360 92f7ce16f3709d5cb8251bf0bfe84a87 909 PANTHER PTHR24423 465 519 3.6E-89 T 14-09-2016 AY555_RS00360 92f7ce16f3709d5cb8251bf0bfe84a87 909 PANTHER PTHR24423 674 901 3.6E-89 T 14-09-2016 AY555_RS00360 92f7ce16f3709d5cb8251bf0bfe84a87 909 PANTHER PTHR24423 5 18 3.6E-89 T 14-09-2016 AY555_RS00360 92f7ce16f3709d5cb8251bf0bfe84a87 909 SUPERFAMILY SSF55874 734 901 2.1E-43 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS00360 92f7ce16f3709d5cb8251bf0bfe84a87 909 Gene3D G3DSA:1.10.287.130 668 731 1.6E-17 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS00360 92f7ce16f3709d5cb8251bf0bfe84a87 909 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 791 903 4.3E-25 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS01340 8c37985d715d381b5f5c0adf9ff31600 408 SUPERFAMILY SSF81342 11 273 4.55E-109 T 14-09-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 AY555_RS01340 8c37985d715d381b5f5c0adf9ff31600 408 PANTHER PTHR19271 6 387 1.8E-220 T 14-09-2016 AY555_RS01340 8c37985d715d381b5f5c0adf9ff31600 408 PIRSF PIRSF038885 1 403 2.5E-194 T 14-09-2016 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 AY555_RS01340 8c37985d715d381b5f5c0adf9ff31600 408 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 271 372 1.8E-42 T 14-09-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 AY555_RS01340 8c37985d715d381b5f5c0adf9ff31600 408 Gene3D G3DSA:1.20.810.10 11 392 3.9E-175 T 14-09-2016 IPR027387 Cytochrome b/b6-like domain AY555_RS01340 8c37985d715d381b5f5c0adf9ff31600 408 SUPERFAMILY SSF81648 274 391 8.72E-45 T 14-09-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 AY555_RS01340 8c37985d715d381b5f5c0adf9ff31600 408 PANTHER PTHR19271:SF5 6 387 1.8E-220 T 14-09-2016 AY555_RS01340 8c37985d715d381b5f5c0adf9ff31600 408 Pfam PF00033 Cytochrome b/b6/petB 29 213 3.5E-75 T 14-09-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 AY555_RS08510 4ff81a1537bc5a830bc30d217312bea5 262 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 2 255 1.3E-71 T 14-09-2016 AY555_RS08510 4ff81a1537bc5a830bc30d217312bea5 262 SUPERFAMILY SSF56219 2 256 3.01E-78 T 14-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase AY555_RS08510 4ff81a1537bc5a830bc30d217312bea5 262 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 255 4.5E-72 T 14-09-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 AY555_RS08510 4ff81a1537bc5a830bc30d217312bea5 262 Gene3D G3DSA:3.60.10.10 2 255 9.6E-80 T 14-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase AY555_RS08510 4ff81a1537bc5a830bc30d217312bea5 262 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 14-09-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 AY555_RS08510 4ff81a1537bc5a830bc30d217312bea5 262 PANTHER PTHR22748 1 251 2.3E-108 T 14-09-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 AY555_RS08510 4ff81a1537bc5a830bc30d217312bea5 262 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 248 9.3E-26 T 14-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase AY555_RS08510 4ff81a1537bc5a830bc30d217312bea5 262 PANTHER PTHR22748:SF9 1 251 2.3E-108 T 14-09-2016 AY555_RS02535 49a2f288bf2eb3c5395629338b87eeaf 636 SUPERFAMILY SSF69618 1 241 2.88E-42 T 14-09-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AY555_RS02535 49a2f288bf2eb3c5395629338b87eeaf 636 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 238 2.7E-32 T 14-09-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AY555_RS02535 49a2f288bf2eb3c5395629338b87eeaf 636 Gene3D G3DSA:3.40.50.10090 2 113 5.7E-12 T 14-09-2016 AY555_RS02535 49a2f288bf2eb3c5395629338b87eeaf 636 Gene3D G3DSA:3.40.50.10090 137 241 1.1E-12 T 14-09-2016 AY555_RS02535 49a2f288bf2eb3c5395629338b87eeaf 636 Gene3D G3DSA:1.20.1200.10 314 402 2.6E-4 T 14-09-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AY555_RS07950 3a9779ecfcbb8fe8d1532091a8be8bbb 521 SUPERFAMILY SSF52540 76 361 6.21E-75 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS07950 3a9779ecfcbb8fe8d1532091a8be8bbb 521 Gene3D G3DSA:3.40.50.300 1 212 5.6E-79 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS07950 3a9779ecfcbb8fe8d1532091a8be8bbb 521 Gene3D G3DSA:3.40.50.300 213 373 9.2E-52 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS07950 3a9779ecfcbb8fe8d1532091a8be8bbb 521 SMART SM00490 259 340 1.0E-31 T 14-09-2016 IPR001650 Helicase, C-terminal AY555_RS07950 3a9779ecfcbb8fe8d1532091a8be8bbb 521 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 14-09-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AY555_RS07950 3a9779ecfcbb8fe8d1532091a8be8bbb 521 PANTHER PTHR24031 1 465 1.3E-189 T 14-09-2016 AY555_RS07950 3a9779ecfcbb8fe8d1532091a8be8bbb 521 Pfam PF00271 Helicase conserved C-terminal domain 232 340 2.4E-27 T 14-09-2016 IPR001650 Helicase, C-terminal AY555_RS07950 3a9779ecfcbb8fe8d1532091a8be8bbb 521 Pfam PF00270 DEAD/DEAH box helicase 26 197 1.5E-46 T 14-09-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AY555_RS07950 3a9779ecfcbb8fe8d1532091a8be8bbb 521 SMART SM00487 21 223 8.8E-61 T 14-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AY555_RS07950 3a9779ecfcbb8fe8d1532091a8be8bbb 521 PANTHER PTHR24031:SF261 1 465 1.3E-189 T 14-09-2016 AY555_RS04920 5fef2cfbdee21f93e21c642d50ad0276 394 PANTHER PTHR30544 31 390 2.9E-165 T 14-09-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AY555_RS04920 5fef2cfbdee21f93e21c642d50ad0276 394 SUPERFAMILY SSF102114 129 354 8.24E-13 T 14-09-2016 AY555_RS04920 5fef2cfbdee21f93e21c642d50ad0276 394 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 31 379 71.953 T 14-09-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AY555_RS04920 5fef2cfbdee21f93e21c642d50ad0276 394 Gene3D G3DSA:3.20.20.70 131 370 8.9E-15 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS04920 5fef2cfbdee21f93e21c642d50ad0276 394 PANTHER PTHR30544:SF5 31 390 2.9E-165 T 14-09-2016 AY555_RS04920 5fef2cfbdee21f93e21c642d50ad0276 394 Pfam PF04055 Radical SAM superfamily 134 307 5.3E-16 T 14-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AY555_RS04920 5fef2cfbdee21f93e21c642d50ad0276 394 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 30 384 6.2E-121 T 14-09-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AY555_RS04920 5fef2cfbdee21f93e21c642d50ad0276 394 PIRSF PIRSF006004 23 392 5.6E-141 T 14-09-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AY555_RS05340 ed0c96a9f53ff44ddf7e9006ad67dd97 319 Gene3D G3DSA:2.40.30.30 181 314 1.2E-41 T 14-09-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 AY555_RS05340 ed0c96a9f53ff44ddf7e9006ad67dd97 319 SUPERFAMILY SSF82114 175 312 1.57E-39 T 14-09-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 AY555_RS05340 ed0c96a9f53ff44ddf7e9006ad67dd97 319 PANTHER PTHR22749:SF0 1 310 1.3E-115 T 14-09-2016 AY555_RS05340 ed0c96a9f53ff44ddf7e9006ad67dd97 319 Gene3D G3DSA:3.40.50.620 1 180 4.6E-61 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS05340 ed0c96a9f53ff44ddf7e9006ad67dd97 319 Pfam PF01687 Riboflavin kinase 185 309 4.3E-35 T 14-09-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 AY555_RS05340 ed0c96a9f53ff44ddf7e9006ad67dd97 319 Pfam PF06574 FAD synthetase 14 166 2.8E-49 T 14-09-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 AY555_RS05340 ed0c96a9f53ff44ddf7e9006ad67dd97 319 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 19 310 3.0E-77 T 14-09-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 AY555_RS05340 ed0c96a9f53ff44ddf7e9006ad67dd97 319 SUPERFAMILY SSF52374 17 177 3.1E-30 T 14-09-2016 AY555_RS05340 ed0c96a9f53ff44ddf7e9006ad67dd97 319 PIRSF PIRSF004491 1 317 2.5E-95 T 14-09-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 AY555_RS05340 ed0c96a9f53ff44ddf7e9006ad67dd97 319 PANTHER PTHR22749 1 310 1.3E-115 T 14-09-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 AY555_RS05340 ed0c96a9f53ff44ddf7e9006ad67dd97 319 SMART SM00904 184 311 9.0E-50 T 14-09-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 AY555_RS07345 9f7edf6dd9b6ec5e540cffaf0acbaaae 378 SUPERFAMILY SSF53187 60 137 1.95E-13 T 14-09-2016 AY555_RS07345 9f7edf6dd9b6ec5e540cffaf0acbaaae 378 SUPERFAMILY SSF53187 185 307 1.95E-13 T 14-09-2016 AY555_RS07345 9f7edf6dd9b6ec5e540cffaf0acbaaae 378 Gene3D G3DSA:3.40.630.10 197 237 2.3E-12 T 14-09-2016 AY555_RS07345 9f7edf6dd9b6ec5e540cffaf0acbaaae 378 Gene3D G3DSA:3.40.630.10 56 140 2.3E-12 T 14-09-2016 AY555_RS07345 9f7edf6dd9b6ec5e540cffaf0acbaaae 378 Pfam PF10994 Protein of unknown function (DUF2817) 19 360 3.2E-88 T 14-09-2016 IPR021259 Protein of unknown function DUF2817 AY555_RS07330 ceebf6dde9c9619ae6dea7234ad3e9e7 266 PANTHER PTHR11403:SF7 3 265 1.2E-102 T 14-09-2016 AY555_RS07330 ceebf6dde9c9619ae6dea7234ad3e9e7 266 Gene3D G3DSA:1.20.120.80 75 263 1.7E-64 T 14-09-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 AY555_RS07330 ceebf6dde9c9619ae6dea7234ad3e9e7 266 Gene3D G3DSA:1.10.287.70 8 71 1.4E-27 T 14-09-2016 AY555_RS07330 ceebf6dde9c9619ae6dea7234ad3e9e7 266 PANTHER PTHR11403 3 265 1.2E-102 T 14-09-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 AY555_RS07330 ceebf6dde9c9619ae6dea7234ad3e9e7 266 Pfam PF00510 Cytochrome c oxidase subunit III 10 263 8.9E-80 T 14-09-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 AY555_RS07330 ceebf6dde9c9619ae6dea7234ad3e9e7 266 SUPERFAMILY SSF81452 8 263 4.84E-86 T 14-09-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 AY555_RS09245 3504fdcd1a4f2c5ef7a4f2d540feacaa 212 SUPERFAMILY SSF55729 4 203 5.51E-71 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AY555_RS09245 3504fdcd1a4f2c5ef7a4f2d540feacaa 212 PANTHER PTHR30098 4 211 1.3E-67 T 14-09-2016 AY555_RS09245 3504fdcd1a4f2c5ef7a4f2d540feacaa 212 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 7 180 1.3E-65 T 14-09-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 AY555_RS09245 3504fdcd1a4f2c5ef7a4f2d540feacaa 212 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 212 76.652 T 14-09-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 AY555_RS09245 3504fdcd1a4f2c5ef7a4f2d540feacaa 212 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 9 197 3.3E-59 T 14-09-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 AY555_RS05750 bb9dc883beecddef683046b5ee2091cb 291 PRINTS PR01438 Universal stress protein signature 251 263 1.6E-5 T 14-09-2016 IPR006015 Universal stress protein A AY555_RS05750 bb9dc883beecddef683046b5ee2091cb 291 PRINTS PR01438 Universal stress protein signature 269 291 1.6E-5 T 14-09-2016 IPR006015 Universal stress protein A AY555_RS05750 bb9dc883beecddef683046b5ee2091cb 291 Pfam PF00582 Universal stress protein family 241 290 2.0E-10 T 14-09-2016 IPR006016 UspA GO:0006950 AY555_RS05750 bb9dc883beecddef683046b5ee2091cb 291 SUPERFAMILY SSF52402 169 291 7.12E-17 T 14-09-2016 AY555_RS05750 bb9dc883beecddef683046b5ee2091cb 291 Gene3D G3DSA:3.40.50.620 15 160 6.9E-4 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS05750 bb9dc883beecddef683046b5ee2091cb 291 Gene3D G3DSA:3.40.50.620 204 290 2.0E-15 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS04095 c3c92a741c5f9a526936ac90c8bd933b 449 Gene3D G3DSA:3.40.50.2300 337 422 2.3E-29 T 14-09-2016 AY555_RS04095 c3c92a741c5f9a526936ac90c8bd933b 449 Gene3D G3DSA:3.40.50.2300 70 176 2.3E-29 T 14-09-2016 AY555_RS04095 c3c92a741c5f9a526936ac90c8bd933b 449 Pfam PF13458 Periplasmic binding protein 71 430 1.4E-35 T 14-09-2016 IPR028081 Leucine-binding protein domain AY555_RS04095 c3c92a741c5f9a526936ac90c8bd933b 449 SUPERFAMILY SSF53822 71 254 1.09E-52 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AY555_RS04095 c3c92a741c5f9a526936ac90c8bd933b 449 SUPERFAMILY SSF53822 284 432 1.09E-52 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AY555_RS04095 c3c92a741c5f9a526936ac90c8bd933b 449 PANTHER PTHR30483 71 429 1.0E-14 T 14-09-2016 AY555_RS04965 ee201aac9fd8156ff869ac4f1de176d6 81 Gene3D G3DSA:1.10.1200.10 15 75 5.2E-6 T 14-09-2016 IPR009081 Phosphopantetheine binding ACP domain AY555_RS04965 ee201aac9fd8156ff869ac4f1de176d6 81 SUPERFAMILY SSF47336 19 75 1.7E-7 T 14-09-2016 IPR009081 Phosphopantetheine binding ACP domain AY555_RS07240 8648adfb77a78026b23472af2c649a76 832 Pfam PF08448 PAS fold 192 302 2.5E-8 T 14-09-2016 IPR013656 PAS fold-4 AY555_RS07240 8648adfb77a78026b23472af2c649a76 832 SUPERFAMILY SSF47384 306 387 7.06E-19 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS07240 8648adfb77a78026b23472af2c649a76 832 Gene3D G3DSA:1.10.287.130 327 383 6.0E-15 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS07240 8648adfb77a78026b23472af2c649a76 832 PANTHER PTHR24423 178 740 2.7E-148 T 14-09-2016 AY555_RS07240 8648adfb77a78026b23472af2c649a76 832 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 182 308 3.1E-7 T 14-09-2016 IPR000014 PAS domain AY555_RS07240 8648adfb77a78026b23472af2c649a76 832 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 434 548 6.0E-25 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS07240 8648adfb77a78026b23472af2c649a76 832 SUPERFAMILY SSF47226 726 804 3.27E-9 T 14-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AY555_RS07240 8648adfb77a78026b23472af2c649a76 832 SUPERFAMILY SSF52172 576 699 6.12E-35 T 14-09-2016 IPR011006 CheY-like superfamily AY555_RS07240 8648adfb77a78026b23472af2c649a76 832 Pfam PF01627 Hpt domain 730 814 2.6E-5 T 14-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AY555_RS07240 8648adfb77a78026b23472af2c649a76 832 Gene3D G3DSA:1.20.120.160 725 808 3.0E-9 T 14-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AY555_RS07240 8648adfb77a78026b23472af2c649a76 832 SMART SM00387 434 549 1.2E-33 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS07240 8648adfb77a78026b23472af2c649a76 832 SMART SM00388 322 387 1.1E-19 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS07240 8648adfb77a78026b23472af2c649a76 832 Pfam PF00072 Response regulator receiver domain 578 694 1.0E-21 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS07240 8648adfb77a78026b23472af2c649a76 832 SUPERFAMILY SSF55785 176 300 1.01E-14 T 14-09-2016 IPR000014 PAS domain AY555_RS07240 8648adfb77a78026b23472af2c649a76 832 Gene3D G3DSA:3.30.450.20 186 326 1.3E-17 T 14-09-2016 AY555_RS07240 8648adfb77a78026b23472af2c649a76 832 Gene3D G3DSA:3.40.50.2300 574 701 4.5E-37 T 14-09-2016 AY555_RS07240 8648adfb77a78026b23472af2c649a76 832 PRINTS PR00344 Bacterial sensor protein C-terminal signature 509 527 9.8E-16 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS07240 8648adfb77a78026b23472af2c649a76 832 PRINTS PR00344 Bacterial sensor protein C-terminal signature 474 488 9.8E-16 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS07240 8648adfb77a78026b23472af2c649a76 832 PRINTS PR00344 Bacterial sensor protein C-terminal signature 533 546 9.8E-16 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS07240 8648adfb77a78026b23472af2c649a76 832 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 502 9.8E-16 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AY555_RS07240 8648adfb77a78026b23472af2c649a76 832 Gene3D G3DSA:3.30.565.10 390 548 1.0E-43 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS07240 8648adfb77a78026b23472af2c649a76 832 Pfam PF00512 His Kinase A (phospho-acceptor) domain 322 386 5.4E-17 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AY555_RS07240 8648adfb77a78026b23472af2c649a76 832 SMART SM00091 185 251 2.9E-7 T 14-09-2016 IPR000014 PAS domain AY555_RS07240 8648adfb77a78026b23472af2c649a76 832 SMART SM00448 576 694 9.6E-36 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS07240 8648adfb77a78026b23472af2c649a76 832 SUPERFAMILY SSF55874 378 547 3.8E-41 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS06165 b723aae7eab43fdc07927ec93aaa8107 151 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 6 126 2.0E-12 T 14-09-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AY555_RS06165 b723aae7eab43fdc07927ec93aaa8107 151 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 151 30.688 T 14-09-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AY555_RS06165 b723aae7eab43fdc07927ec93aaa8107 151 PANTHER PTHR34701 4 150 2.4E-21 T 14-09-2016 AY555_RS06165 b723aae7eab43fdc07927ec93aaa8107 151 SUPERFAMILY SSF89447 1 139 5.02E-32 T 14-09-2016 AY555_RS06165 b723aae7eab43fdc07927ec93aaa8107 151 Pfam PF02381 MraZ protein, putative antitoxin-like 80 135 4.7E-10 T 14-09-2016 IPR020603 MraZ domain AY555_RS05890 408c22156ec4218603cda0ef4981973f 362 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 14-09-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AY555_RS05890 408c22156ec4218603cda0ef4981973f 362 TIGRFAM TIGR00033 aroC: chorismate synthase 10 358 6.5E-135 T 14-09-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AY555_RS05890 408c22156ec4218603cda0ef4981973f 362 Hamap MF_00300 Chorismate synthase [aroC]. 10 361 37.365 T 14-09-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AY555_RS05890 408c22156ec4218603cda0ef4981973f 362 ProSitePatterns PS00789 Chorismate synthase signature 3. 328 344 - T 14-09-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AY555_RS05890 408c22156ec4218603cda0ef4981973f 362 SUPERFAMILY SSF103263 4 360 3.14E-146 T 14-09-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AY555_RS05890 408c22156ec4218603cda0ef4981973f 362 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 14-09-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AY555_RS05890 408c22156ec4218603cda0ef4981973f 362 PIRSF PIRSF001456 3 361 3.2E-142 T 14-09-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AY555_RS05890 408c22156ec4218603cda0ef4981973f 362 Pfam PF01264 Chorismate synthase 10 354 2.0E-139 T 14-09-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AY555_RS05890 408c22156ec4218603cda0ef4981973f 362 PANTHER PTHR21085 2 361 2.5E-203 T 14-09-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AY555_RS05890 408c22156ec4218603cda0ef4981973f 362 Gene3D G3DSA:3.60.150.10 9 360 1.6E-157 T 14-09-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AY555_RS03260 e9c75cd4819aa97544cd42ac08a80381 183 Gene3D G3DSA:3.40.30.10 9 174 6.2E-33 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS03260 e9c75cd4819aa97544cd42ac08a80381 183 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 9 173 6.8E-48 T 14-09-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 AY555_RS03260 e9c75cd4819aa97544cd42ac08a80381 183 PANTHER PTHR10681:SF107 4 176 1.4E-39 T 14-09-2016 AY555_RS03260 e9c75cd4819aa97544cd42ac08a80381 183 Pfam PF08534 Redoxin 42 162 3.1E-11 T 14-09-2016 IPR013740 Redoxin GO:0016491 AY555_RS03260 e9c75cd4819aa97544cd42ac08a80381 183 PANTHER PTHR10681 4 176 1.4E-39 T 14-09-2016 AY555_RS03260 e9c75cd4819aa97544cd42ac08a80381 183 SUPERFAMILY SSF52833 51 174 2.94E-30 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS03260 e9c75cd4819aa97544cd42ac08a80381 183 ProSitePatterns PS00194 Thioredoxin family active site. 66 84 - T 14-09-2016 IPR017937 Thioredoxin, conserved site GO:0045454 AY555_RS01530 77e49d8cbe202337e98b547ed86e8964 270 Gene3D G3DSA:3.40.50.1860 3 170 5.0E-38 T 14-09-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AY555_RS01530 77e49d8cbe202337e98b547ed86e8964 270 Hamap MF_00258 Glutamate racemase [murI]. 2 251 27.813 T 14-09-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AY555_RS01530 77e49d8cbe202337e98b547ed86e8964 270 TIGRFAM TIGR00067 glut_race: glutamate racemase 4 217 3.8E-46 T 14-09-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AY555_RS01530 77e49d8cbe202337e98b547ed86e8964 270 Pfam PF01177 Asp/Glu/Hydantoin racemase 5 215 7.3E-20 T 14-09-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AY555_RS01530 77e49d8cbe202337e98b547ed86e8964 270 SUPERFAMILY SSF53681 3 104 4.9E-25 T 14-09-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AY555_RS01530 77e49d8cbe202337e98b547ed86e8964 270 PANTHER PTHR21198 1 218 9.0E-64 T 14-09-2016 AY555_RS01530 77e49d8cbe202337e98b547ed86e8964 270 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 69 77 - T 14-09-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AY555_RS01530 77e49d8cbe202337e98b547ed86e8964 270 PANTHER PTHR21198:SF2 1 218 9.0E-64 T 14-09-2016 AY555_RS01530 77e49d8cbe202337e98b547ed86e8964 270 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 180 190 - T 14-09-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AY555_RS01530 77e49d8cbe202337e98b547ed86e8964 270 SUPERFAMILY SSF53681 108 236 3.05E-28 T 14-09-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AY555_RS04850 2c095863a1b6aa33dfb2be1b97b3acda 265 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 11 106 9.7E-9 T 14-09-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal AY555_RS04850 2c095863a1b6aa33dfb2be1b97b3acda 265 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 170 264 1.9E-27 T 14-09-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 AY555_RS04850 2c095863a1b6aa33dfb2be1b97b3acda 265 Gene3D G3DSA:1.10.3730.10 169 257 7.1E-28 T 14-09-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 AY555_RS04850 2c095863a1b6aa33dfb2be1b97b3acda 265 PANTHER PTHR11645:SF0 14 265 1.8E-69 T 14-09-2016 AY555_RS04850 2c095863a1b6aa33dfb2be1b97b3acda 265 SUPERFAMILY SSF51735 8 167 1.35E-25 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS04850 2c095863a1b6aa33dfb2be1b97b3acda 265 PANTHER PTHR11645 14 265 1.8E-69 T 14-09-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 AY555_RS04850 2c095863a1b6aa33dfb2be1b97b3acda 265 PIRSF PIRSF000193 8 265 1.0E-56 T 14-09-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 AY555_RS04850 2c095863a1b6aa33dfb2be1b97b3acda 265 SUPERFAMILY SSF48179 169 254 1.34E-26 T 14-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AY555_RS04850 2c095863a1b6aa33dfb2be1b97b3acda 265 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 8 265 21.602 T 14-09-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 AY555_RS04850 2c095863a1b6aa33dfb2be1b97b3acda 265 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 11 252 1.4E-65 T 14-09-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 AY555_RS04850 2c095863a1b6aa33dfb2be1b97b3acda 265 Gene3D G3DSA:3.40.50.720 10 167 4.6E-34 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS07100 20a9df95e4c47f731c9f48d01c03086a 261 PANTHER PTHR21234 4 253 3.3E-148 T 14-09-2016 IPR018017 Nucleoside phosphorylase AY555_RS07100 20a9df95e4c47f731c9f48d01c03086a 261 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 10 256 1.9E-108 T 14-09-2016 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|UniPathway: UPA00574 AY555_RS07100 20a9df95e4c47f731c9f48d01c03086a 261 PANTHER PTHR21234:SF22 4 253 3.3E-148 T 14-09-2016 AY555_RS07100 20a9df95e4c47f731c9f48d01c03086a 261 Gene3D G3DSA:3.40.50.1580 23 253 2.6E-79 T 14-09-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AY555_RS07100 20a9df95e4c47f731c9f48d01c03086a 261 Pfam PF01048 Phosphorylase superfamily 25 234 3.1E-39 T 14-09-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AY555_RS07100 20a9df95e4c47f731c9f48d01c03086a 261 SUPERFAMILY SSF53167 12 253 1.02E-68 T 14-09-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AY555_RS07100 20a9df95e4c47f731c9f48d01c03086a 261 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 70 85 - T 14-09-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AY555_RS07525 5321995f05c07ee86ea5b158b71c689b 440 Pfam PF01171 PP-loop family 29 207 5.5E-43 T 14-09-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal AY555_RS07525 5321995f05c07ee86ea5b158b71c689b 440 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 29 210 1.2E-40 T 14-09-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AY555_RS07525 5321995f05c07ee86ea5b158b71c689b 440 Gene3D G3DSA:3.40.50.620 29 182 5.2E-13 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS07525 5321995f05c07ee86ea5b158b71c689b 440 PANTHER PTHR11807:SF2 29 210 2.5E-49 T 14-09-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AY555_RS07525 5321995f05c07ee86ea5b158b71c689b 440 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 13 306 17.412 T 14-09-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AY555_RS07525 5321995f05c07ee86ea5b158b71c689b 440 PANTHER PTHR11807 29 210 2.5E-49 T 14-09-2016 AY555_RS07525 5321995f05c07ee86ea5b158b71c689b 440 SUPERFAMILY SSF52402 29 223 1.04E-40 T 14-09-2016 AY555_RS00595 e99f11421b5574cd95500d831f820695 289 PANTHER PTHR19288:SF3 10 289 4.9E-63 T 14-09-2016 AY555_RS00595 e99f11421b5574cd95500d831f820695 289 Pfam PF13344 Haloacid dehalogenase-like hydrolase 20 125 3.6E-15 T 14-09-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA AY555_RS00595 e99f11421b5574cd95500d831f820695 289 Pfam PF13242 HAD-hyrolase-like 201 256 2.1E-10 T 14-09-2016 AY555_RS00595 e99f11421b5574cd95500d831f820695 289 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 20 250 4.2E-31 T 14-09-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA AY555_RS00595 e99f11421b5574cd95500d831f820695 289 Gene3D G3DSA:3.40.50.1000 201 256 9.0E-30 T 14-09-2016 IPR023214 HAD-like domain AY555_RS00595 e99f11421b5574cd95500d831f820695 289 Gene3D G3DSA:3.40.50.1000 18 89 9.0E-30 T 14-09-2016 IPR023214 HAD-like domain AY555_RS00595 e99f11421b5574cd95500d831f820695 289 PANTHER PTHR19288 10 289 4.9E-63 T 14-09-2016 AY555_RS00595 e99f11421b5574cd95500d831f820695 289 TIGRFAM TIGR01459 HAD-SF-IIA-hyp4: HAD hydrolase, TIGR01459 family 17 248 9.3E-52 T 14-09-2016 IPR006356 HAD-superfamily hydrolase, subfamily IIA, hypothetical 3 AY555_RS00595 e99f11421b5574cd95500d831f820695 289 SUPERFAMILY SSF56784 18 261 2.32E-45 T 14-09-2016 IPR023214 HAD-like domain AY555_RS00300 27094f9a6e554350290dd690fc1f9091 76 Gene3D G3DSA:1.10.10.10 6 44 9.6E-4 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS00300 27094f9a6e554350290dd690fc1f9091 76 SUPERFAMILY SSF46785 1 76 8.76E-15 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS00300 27094f9a6e554350290dd690fc1f9091 76 Pfam PF09012 FeoC like transcriptional regulator 4 74 8.1E-15 T 14-09-2016 IPR015102 Transcriptional regulator HTH-type, FeoC AY555_RS02825 6e465611a6506ff18fd2e2101131f5a7 192 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 43 149 1.9E-15 T 14-09-2016 IPR006448 Putative phage terminase, small subunit, P27 family AY555_RS02825 6e465611a6506ff18fd2e2101131f5a7 192 Pfam PF05119 Phage terminase, small subunit 52 149 1.3E-23 T 14-09-2016 IPR006448 Putative phage terminase, small subunit, P27 family AY555_RS08455 7d4cbba9086534f4736135e4915df6b6 402 PANTHER PTHR21581:SF3 28 394 4.1E-96 T 14-09-2016 AY555_RS08455 7d4cbba9086534f4736135e4915df6b6 402 SUPERFAMILY SSF69189 277 370 8.04E-19 T 14-09-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 AY555_RS08455 7d4cbba9086534f4736135e4915df6b6 402 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 28 253 4.9E-73 T 14-09-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AY555_RS08455 7d4cbba9086534f4736135e4915df6b6 402 SMART SM00936 277 368 1.4E-25 T 14-09-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 AY555_RS08455 7d4cbba9086534f4736135e4915df6b6 402 SUPERFAMILY SSF56601 7 277 1.83E-82 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AY555_RS08455 7d4cbba9086534f4736135e4915df6b6 402 Gene3D G3DSA:2.60.410.10 278 368 3.4E-20 T 14-09-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 AY555_RS08455 7d4cbba9086534f4736135e4915df6b6 402 PANTHER PTHR21581 28 394 4.1E-96 T 14-09-2016 AY555_RS08455 7d4cbba9086534f4736135e4915df6b6 402 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 144 157 2.9E-16 T 14-09-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AY555_RS08455 7d4cbba9086534f4736135e4915df6b6 402 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 117 134 2.9E-16 T 14-09-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AY555_RS08455 7d4cbba9086534f4736135e4915df6b6 402 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 59 70 2.9E-16 T 14-09-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AY555_RS08455 7d4cbba9086534f4736135e4915df6b6 402 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 277 368 4.6E-18 T 14-09-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 AY555_RS08455 7d4cbba9086534f4736135e4915df6b6 402 Gene3D G3DSA:3.40.710.10 26 277 2.4E-93 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AY555_RS04645 d7a98ebd56e7c6d38e1ea4b96f8f3162 166 Pfam PF04314 Protein of unknown function (DUF461) 33 142 3.8E-36 T 14-09-2016 IPR007410 DR1885-like metal-binding protein AY555_RS04645 d7a98ebd56e7c6d38e1ea4b96f8f3162 166 SUPERFAMILY SSF110087 9 150 1.83E-45 T 14-09-2016 IPR007410 DR1885-like metal-binding protein AY555_RS04645 d7a98ebd56e7c6d38e1ea4b96f8f3162 166 PANTHER PTHR36302:SF1 21 165 5.8E-30 T 14-09-2016 AY555_RS04645 d7a98ebd56e7c6d38e1ea4b96f8f3162 166 PANTHER PTHR36302 21 165 5.8E-30 T 14-09-2016 AY555_RS07300 b2a46a52106a133b792e230673143219 150 Gene3D G3DSA:3.30.230.10 25 150 3.7E-52 T 14-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AY555_RS07300 b2a46a52106a133b792e230673143219 150 ProSitePatterns PS00360 Ribosomal protein S9 signature. 89 107 - T 14-09-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 AY555_RS07300 b2a46a52106a133b792e230673143219 150 Pfam PF00380 Ribosomal protein S9/S16 30 150 5.5E-49 T 14-09-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 AY555_RS07300 b2a46a52106a133b792e230673143219 150 SUPERFAMILY SSF54211 25 150 2.09E-48 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AY555_RS07300 b2a46a52106a133b792e230673143219 150 PANTHER PTHR21569 17 150 1.5E-71 T 14-09-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 AY555_RS07300 b2a46a52106a133b792e230673143219 150 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 21 150 32.647 T 14-09-2016 IPR023035 Ribosomal protein S9, bacterial/plastid AY555_RS09725 9682f575a0d630c936da6ee4f17dc8e6 697 PANTHER PTHR30075:SF2 1 689 2.1E-268 T 14-09-2016 AY555_RS09725 9682f575a0d630c936da6ee4f17dc8e6 697 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 544 8.9E-205 T 14-09-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AY555_RS09725 9682f575a0d630c936da6ee4f17dc8e6 697 SUPERFAMILY SSF109604 334 483 1.88E-18 T 14-09-2016 AY555_RS09725 9682f575a0d630c936da6ee4f17dc8e6 697 PANTHER PTHR30075 1 689 2.1E-268 T 14-09-2016 AY555_RS09725 9682f575a0d630c936da6ee4f17dc8e6 697 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 686 23.597 T 14-09-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AY555_RS09725 9682f575a0d630c936da6ee4f17dc8e6 697 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 310 326 1.9E-30 T 14-09-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AY555_RS09725 9682f575a0d630c936da6ee4f17dc8e6 697 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 237 252 1.9E-30 T 14-09-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AY555_RS09725 9682f575a0d630c936da6ee4f17dc8e6 697 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 49 61 1.9E-30 T 14-09-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AY555_RS09725 9682f575a0d630c936da6ee4f17dc8e6 697 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 1.9E-30 T 14-09-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AY555_RS09725 9682f575a0d630c936da6ee4f17dc8e6 697 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 386 405 1.9E-30 T 14-09-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AY555_RS09725 9682f575a0d630c936da6ee4f17dc8e6 697 Gene3D G3DSA:1.10.730.10 580 676 1.8E-6 T 14-09-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS09725 9682f575a0d630c936da6ee4f17dc8e6 697 Pfam PF05746 DALR anticodon binding domain 576 676 1.7E-8 T 14-09-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AY555_RS09725 9682f575a0d630c936da6ee4f17dc8e6 697 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 2 685 9.8E-186 T 14-09-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AY555_RS07050 9a284d593fbc8a70da7d4626b036f35f 445 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 293 3.7E-71 T 14-09-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 AY555_RS07050 9a284d593fbc8a70da7d4626b036f35f 445 PANTHER PTHR11451:SF41 3 291 1.6E-68 T 14-09-2016 AY555_RS07050 9a284d593fbc8a70da7d4626b036f35f 445 SUPERFAMILY SSF48163 302 444 2.09E-27 T 14-09-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AY555_RS07050 9a284d593fbc8a70da7d4626b036f35f 445 Gene3D G3DSA:3.40.50.620 184 233 5.2E-44 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS07050 9a284d593fbc8a70da7d4626b036f35f 445 Gene3D G3DSA:3.40.50.620 3 67 5.2E-44 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS07050 9a284d593fbc8a70da7d4626b036f35f 445 PANTHER PTHR11451 3 291 1.6E-68 T 14-09-2016 AY555_RS07050 9a284d593fbc8a70da7d4626b036f35f 445 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 14-09-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS07050 9a284d593fbc8a70da7d4626b036f35f 445 SUPERFAMILY SSF52374 3 295 2.65E-90 T 14-09-2016 AY555_RS07050 9a284d593fbc8a70da7d4626b036f35f 445 Gene3D G3DSA:1.10.1160.10 236 313 2.4E-13 T 14-09-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 AY555_RS07050 9a284d593fbc8a70da7d4626b036f35f 445 Gene3D G3DSA:1.10.10.350 368 442 7.0E-13 T 14-09-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AY555_RS07050 9a284d593fbc8a70da7d4626b036f35f 445 Gene3D G3DSA:3.90.800.10 68 182 8.9E-30 T 14-09-2016 AY555_RS07050 9a284d593fbc8a70da7d4626b036f35f 445 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 3 445 26.317 T 14-09-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AY555_RS07050 9a284d593fbc8a70da7d4626b036f35f 445 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 324 4.8E-91 T 14-09-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AY555_RS07050 9a284d593fbc8a70da7d4626b036f35f 445 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.2E-16 T 14-09-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AY555_RS07050 9a284d593fbc8a70da7d4626b036f35f 445 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.2E-16 T 14-09-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AY555_RS07050 9a284d593fbc8a70da7d4626b036f35f 445 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 1.2E-16 T 14-09-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AY555_RS07050 9a284d593fbc8a70da7d4626b036f35f 445 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.2E-16 T 14-09-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AY555_RS02965 594a256d7a519560be2406b9ec2a6b40 672 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 319 495 1.0E-8 T 14-09-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 AY555_RS02965 594a256d7a519560be2406b9ec2a6b40 672 PANTHER PTHR32234 19 661 4.3E-118 T 14-09-2016 AY555_RS02965 594a256d7a519560be2406b9ec2a6b40 672 Pfam PF11412 Disulphide bond corrector protein DsbC 67 174 7.8E-20 T 14-09-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AY555_RS02965 594a256d7a519560be2406b9ec2a6b40 672 PANTHER PTHR32234:SF3 19 661 4.3E-118 T 14-09-2016 AY555_RS02965 594a256d7a519560be2406b9ec2a6b40 672 SUPERFAMILY SSF52833 558 655 8.11E-11 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS02965 594a256d7a519560be2406b9ec2a6b40 672 Gene3D G3DSA:3.40.30.10 559 655 7.1E-9 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS02965 594a256d7a519560be2406b9ec2a6b40 672 Pfam PF13899 Thioredoxin-like 559 632 8.3E-12 T 14-09-2016 AY555_RS03845 f879d52107114059c4693b70fadc1776 150 Pfam PF03653 Uncharacterised protein family (UPF0093) 11 150 5.2E-53 T 14-09-2016 IPR005265 Uncharacterised protein family UPF0093 AY555_RS03845 f879d52107114059c4693b70fadc1776 150 PANTHER PTHR40255 10 150 1.2E-48 T 14-09-2016 AY555_RS03845 f879d52107114059c4693b70fadc1776 150 PIRSF PIRSF004638 5 150 2.9E-54 T 14-09-2016 IPR005265 Uncharacterised protein family UPF0093 AY555_RS03845 f879d52107114059c4693b70fadc1776 150 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 12 150 1.0E-45 T 14-09-2016 IPR014351 Conserved hypothetical protein CHP00701 AY555_RS02735 abd1b35dada27e58d3fad519d49a9dac 304 SUPERFAMILY SSF53474 185 244 1.06E-8 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AY555_RS02735 abd1b35dada27e58d3fad519d49a9dac 304 Gene3D G3DSA:3.40.50.1820 183 231 1.8E-6 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AY555_RS03020 9f0d28d40d2e56be84abedc041303f17 303 SUPERFAMILY SSF52540 2 157 1.86E-12 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS03020 9f0d28d40d2e56be84abedc041303f17 303 PIRSF PIRSF005052 1 288 1.3E-90 T 14-09-2016 IPR005337 RapZ-like family GO:0005524 AY555_RS03020 9f0d28d40d2e56be84abedc041303f17 303 PANTHER PTHR30448:SF0 1 294 1.4E-105 T 14-09-2016 AY555_RS03020 9f0d28d40d2e56be84abedc041303f17 303 Pfam PF03668 P-loop ATPase protein family 1 284 1.3E-84 T 14-09-2016 IPR005337 RapZ-like family GO:0005524 AY555_RS03020 9f0d28d40d2e56be84abedc041303f17 303 Gene3D G3DSA:3.40.50.300 76 156 3.4E-5 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS03020 9f0d28d40d2e56be84abedc041303f17 303 PANTHER PTHR30448 1 294 1.4E-105 T 14-09-2016 AY555_RS03020 9f0d28d40d2e56be84abedc041303f17 303 Gene3D G3DSA:3.40.50.300 2 26 8.0E-6 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS03020 9f0d28d40d2e56be84abedc041303f17 303 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 286 37.484 T 14-09-2016 IPR005337 RapZ-like family GO:0005524 AY555_RS04750 9bc71182f1584b2b61ef2208895f9789 374 SUPERFAMILY SSF52540 60 201 4.61E-14 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04750 9bc71182f1584b2b61ef2208895f9789 374 PANTHER PTHR12169 4 367 1.6E-143 T 14-09-2016 IPR005654 ATPase, AFG1-like GO:0005524 AY555_RS04750 9bc71182f1584b2b61ef2208895f9789 374 Gene3D G3DSA:3.40.50.300 62 202 5.9E-19 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04750 9bc71182f1584b2b61ef2208895f9789 374 Pfam PF03969 AFG1-like ATPase 7 368 5.0E-120 T 14-09-2016 IPR005654 ATPase, AFG1-like GO:0005524 AY555_RS08050 681c729d8d42e5784cd3a2802fc5717c 478 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 2 196 1.9E-40 T 14-09-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AY555_RS08050 681c729d8d42e5784cd3a2802fc5717c 478 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 216 457 9.5E-46 T 14-09-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 AY555_RS08050 681c729d8d42e5784cd3a2802fc5717c 478 Pfam PF03853 YjeF-related protein N-terminus 19 175 3.5E-37 T 14-09-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AY555_RS08050 681c729d8d42e5784cd3a2802fc5717c 478 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 419 429 - T 14-09-2016 IPR017953 Carbohydrate kinase, predicted, conserved site AY555_RS08050 681c729d8d42e5784cd3a2802fc5717c 478 PANTHER PTHR12592 2 477 2.2E-99 T 14-09-2016 AY555_RS08050 681c729d8d42e5784cd3a2802fc5717c 478 Gene3D G3DSA:3.40.50.10260 2 222 3.8E-62 T 14-09-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AY555_RS08050 681c729d8d42e5784cd3a2802fc5717c 478 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 1 196 22.073 T 14-09-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AY555_RS08050 681c729d8d42e5784cd3a2802fc5717c 478 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 209 475 17.422 T 14-09-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 AY555_RS08050 681c729d8d42e5784cd3a2802fc5717c 478 SUPERFAMILY SSF64153 2 231 5.62E-59 T 14-09-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AY555_RS08050 681c729d8d42e5784cd3a2802fc5717c 478 Pfam PF01256 Carbohydrate kinase 236 457 9.3E-44 T 14-09-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 AY555_RS08050 681c729d8d42e5784cd3a2802fc5717c 478 Gene3D G3DSA:3.40.1190.20 223 477 3.0E-67 T 14-09-2016 IPR029056 Ribokinase-like AY555_RS08050 681c729d8d42e5784cd3a2802fc5717c 478 PIRSF PIRSF017184 1 478 9.3E-106 T 14-09-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 AY555_RS08050 681c729d8d42e5784cd3a2802fc5717c 478 SUPERFAMILY SSF53613 211 475 7.64E-54 T 14-09-2016 IPR029056 Ribokinase-like AY555_RS08050 681c729d8d42e5784cd3a2802fc5717c 478 PANTHER PTHR12592:SF0 2 477 2.2E-99 T 14-09-2016 AY555_RS02860 aac84c6424676ede50e4d399413a604b 507 TIGRFAM TIGR01613 primase_Cterm: phage/plasmid primase, P4 family, C-terminal domain 151 456 3.2E-78 T 14-09-2016 IPR006500 DNA primase, phage/plasmid AY555_RS02860 aac84c6424676ede50e4d399413a604b 507 Pfam PF08706 D5 N terminal like 42 204 8.7E-27 T 14-09-2016 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal AY555_RS02860 aac84c6424676ede50e4d399413a604b 507 SUPERFAMILY SSF52540 225 366 5.83E-10 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS02860 aac84c6424676ede50e4d399413a604b 507 SMART SM00885 42 204 5.4E-26 T 14-09-2016 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal AY555_RS02860 aac84c6424676ede50e4d399413a604b 507 PANTHER PTHR35372:SF2 38 506 3.1E-94 T 14-09-2016 AY555_RS02860 aac84c6424676ede50e4d399413a604b 507 PANTHER PTHR35372 38 506 3.1E-94 T 14-09-2016 AY555_RS02860 aac84c6424676ede50e4d399413a604b 507 Gene3D G3DSA:3.40.50.300 227 390 1.9E-4 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS05030 2e34f3bfdaa1d28252d69cc38c4abee2 557 PANTHER PTHR11819 38 546 2.6E-272 T 14-09-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AY555_RS05030 2e34f3bfdaa1d28252d69cc38c4abee2 557 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 184 209 - T 14-09-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 AY555_RS05030 2e34f3bfdaa1d28252d69cc38c4abee2 557 Pfam PF00474 Sodium:solute symporter family 69 476 4.2E-119 T 14-09-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AY555_RS05030 2e34f3bfdaa1d28252d69cc38c4abee2 557 PANTHER PTHR11819:SF13 38 546 2.6E-272 T 14-09-2016 AY555_RS05030 2e34f3bfdaa1d28252d69cc38c4abee2 557 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 69 474 1.7E-62 T 14-09-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AY555_RS08610 3b58f386325ac4b51d9cbb4c91ded964 218 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 14-09-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AY555_RS08610 3b58f386325ac4b51d9cbb4c91ded964 218 Gene3D G3DSA:3.40.50.150 14 214 4.6E-59 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS08610 3b58f386325ac4b51d9cbb4c91ded964 218 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 5 209 8.1E-61 T 14-09-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AY555_RS08610 3b58f386325ac4b51d9cbb4c91ded964 218 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 7 208 3.8E-57 T 14-09-2016 AY555_RS08610 3b58f386325ac4b51d9cbb4c91ded964 218 PANTHER PTHR11579 7 208 1.1E-68 T 14-09-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AY555_RS08610 3b58f386325ac4b51d9cbb4c91ded964 218 SUPERFAMILY SSF53335 13 210 8.89E-46 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS08610 3b58f386325ac4b51d9cbb4c91ded964 218 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 2 212 36.511 T 14-09-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AY555_RS00585 fcdca752e0820bdaa7333a89d52dd2c2 133 PANTHER PTHR34129 13 132 1.7E-28 T 14-09-2016 AY555_RS00585 fcdca752e0820bdaa7333a89d52dd2c2 133 Pfam PF06108 Protein of unknown function (DUF952) 29 110 1.6E-25 T 14-09-2016 IPR009297 Protein of unknown function DUF952 AY555_RS00585 fcdca752e0820bdaa7333a89d52dd2c2 133 SUPERFAMILY SSF56399 22 127 2.76E-30 T 14-09-2016 AY555_RS00585 fcdca752e0820bdaa7333a89d52dd2c2 133 PANTHER PTHR34129:SF1 13 132 1.7E-28 T 14-09-2016 AY555_RS01660 cf3ab22f4f0055db981b2c6f07c880bc 134 PRINTS PR00061 Ribosomal protein L19 signature 38 67 9.7E-36 T 14-09-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS01660 cf3ab22f4f0055db981b2c6f07c880bc 134 PRINTS PR00061 Ribosomal protein L19 signature 92 117 9.7E-36 T 14-09-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS01660 cf3ab22f4f0055db981b2c6f07c880bc 134 PRINTS PR00061 Ribosomal protein L19 signature 8 37 9.7E-36 T 14-09-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS01660 cf3ab22f4f0055db981b2c6f07c880bc 134 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 1 116 5.2E-48 T 14-09-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS01660 cf3ab22f4f0055db981b2c6f07c880bc 134 ProSitePatterns PS01015 Ribosomal protein L19 signature. 90 105 - T 14-09-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS01660 cf3ab22f4f0055db981b2c6f07c880bc 134 PIRSF PIRSF002191 1 133 3.2E-53 T 14-09-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS01660 cf3ab22f4f0055db981b2c6f07c880bc 134 SUPERFAMILY SSF50104 1 121 3.11E-45 T 14-09-2016 IPR008991 Translation protein SH3-like domain AY555_RS01660 cf3ab22f4f0055db981b2c6f07c880bc 134 Pfam PF01245 Ribosomal protein L19 2 116 1.8E-47 T 14-09-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS01660 cf3ab22f4f0055db981b2c6f07c880bc 134 PANTHER PTHR15680 2 127 1.8E-56 T 14-09-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS01660 cf3ab22f4f0055db981b2c6f07c880bc 134 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 118 30.878 T 14-09-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS03085 0e702400f9a7b9a3545a8caf244feeff 271 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 265 2.6E-83 T 14-09-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AY555_RS03085 0e702400f9a7b9a3545a8caf244feeff 271 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 128 264 8.9E-43 T 14-09-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AY555_RS03085 0e702400f9a7b9a3545a8caf244feeff 271 SUPERFAMILY SSF51735 236 266 1.58E-46 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS03085 0e702400f9a7b9a3545a8caf244feeff 271 SUPERFAMILY SSF51735 1 126 1.58E-46 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS03085 0e702400f9a7b9a3545a8caf244feeff 271 PIRSF PIRSF000161 1 267 4.3E-84 T 14-09-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AY555_RS03085 0e702400f9a7b9a3545a8caf244feeff 271 PANTHER PTHR20836:SF0 1 271 1.1E-90 T 14-09-2016 AY555_RS03085 0e702400f9a7b9a3545a8caf244feeff 271 Gene3D G3DSA:3.40.50.720 1 163 8.6E-54 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS03085 0e702400f9a7b9a3545a8caf244feeff 271 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 1 125 1.2E-35 T 14-09-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AY555_RS03085 0e702400f9a7b9a3545a8caf244feeff 271 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 1 265 33.449 T 14-09-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AY555_RS03085 0e702400f9a7b9a3545a8caf244feeff 271 PANTHER PTHR20836 1 271 1.1E-90 T 14-09-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AY555_RS03085 0e702400f9a7b9a3545a8caf244feeff 271 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 14-09-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AY555_RS03085 0e702400f9a7b9a3545a8caf244feeff 271 SUPERFAMILY SSF55347 127 236 3.92E-34 T 14-09-2016 AY555_RS02850 33040a24dd8634f1e4c51d9937882afb 147 PANTHER PTHR41286 21 143 5.3E-15 T 14-09-2016 AY555_RS02850 33040a24dd8634f1e4c51d9937882afb 147 Pfam PF01844 HNH endonuclease 73 122 1.2E-5 T 14-09-2016 IPR002711 HNH endonuclease GO:0003676|GO:0004519 AY555_RS02850 33040a24dd8634f1e4c51d9937882afb 147 PANTHER PTHR41286:SF1 21 143 5.3E-15 T 14-09-2016 AY555_RS08350 65b58877d8f890cb6983cba1eb0f8f63 394 PANTHER PTHR32125:SF4 12 222 8.8E-58 T 14-09-2016 AY555_RS08350 65b58877d8f890cb6983cba1eb0f8f63 394 Gene3D G3DSA:3.90.550.10 10 224 1.2E-62 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AY555_RS08350 65b58877d8f890cb6983cba1eb0f8f63 394 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 11 237 27.333 T 14-09-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 AY555_RS08350 65b58877d8f890cb6983cba1eb0f8f63 394 Hamap MF_01520 Bifunctional enzyme IspD/IspF [ispDF]. 10 392 40.428 T 14-09-2016 IPR026596 Bifunctional enzyme IspD/IspF KEGG: 00900+4.6.1.12+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056|UniPathway: UPA00056 AY555_RS08350 65b58877d8f890cb6983cba1eb0f8f63 394 PANTHER PTHR32125 12 222 8.8E-58 T 14-09-2016 AY555_RS08350 65b58877d8f890cb6983cba1eb0f8f63 394 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 14 223 1.1E-64 T 14-09-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 AY555_RS08350 65b58877d8f890cb6983cba1eb0f8f63 394 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 12 223 9.8E-59 T 14-09-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 AY555_RS08350 65b58877d8f890cb6983cba1eb0f8f63 394 SUPERFAMILY SSF69765 235 390 2.75E-59 T 14-09-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 AY555_RS08350 65b58877d8f890cb6983cba1eb0f8f63 394 Gene3D G3DSA:3.30.1330.50 234 389 4.3E-62 T 14-09-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 AY555_RS08350 65b58877d8f890cb6983cba1eb0f8f63 394 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 236 391 30.024 T 14-09-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 AY555_RS08350 65b58877d8f890cb6983cba1eb0f8f63 394 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 108 115 - T 14-09-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 AY555_RS08350 65b58877d8f890cb6983cba1eb0f8f63 394 SUPERFAMILY SSF53448 11 224 1.69E-51 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AY555_RS08350 65b58877d8f890cb6983cba1eb0f8f63 394 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 237 389 4.0E-55 T 14-09-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 AY555_RS08350 65b58877d8f890cb6983cba1eb0f8f63 394 Pfam PF02542 YgbB family 237 389 1.1E-55 T 14-09-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 AY555_RS08350 65b58877d8f890cb6983cba1eb0f8f63 394 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 270 285 - T 14-09-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 AY555_RS00875 3bcdf7e007d2113c86c07999ac16aac2 62 Gene3D G3DSA:3.30.1390.20 4 61 1.1E-29 T 14-09-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AY555_RS00875 3bcdf7e007d2113c86c07999ac16aac2 62 Pfam PF00327 Ribosomal protein L30p/L7e 8 57 1.3E-17 T 14-09-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AY555_RS00875 3bcdf7e007d2113c86c07999ac16aac2 62 SUPERFAMILY SSF55129 5 61 3.4E-20 T 14-09-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AY555_RS00875 3bcdf7e007d2113c86c07999ac16aac2 62 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 7 61 2.6E-26 T 14-09-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 AY555_RS00875 3bcdf7e007d2113c86c07999ac16aac2 62 PANTHER PTHR15892:SF2 5 61 2.0E-21 T 14-09-2016 AY555_RS00875 3bcdf7e007d2113c86c07999ac16aac2 62 PIRSF PIRSF002211 1 62 1.9E-25 T 14-09-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 AY555_RS00875 3bcdf7e007d2113c86c07999ac16aac2 62 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 3 61 18.977 T 14-09-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 AY555_RS00875 3bcdf7e007d2113c86c07999ac16aac2 62 PANTHER PTHR15892 5 61 2.0E-21 T 14-09-2016 AY555_RS07590 62a012970e5bc277d6b637f6f3e7235f 251 SUPERFAMILY SSF52540 3 233 1.36E-43 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS07590 62a012970e5bc277d6b637f6f3e7235f 251 SMART SM00382 28 224 3.0E-5 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS07590 62a012970e5bc277d6b637f6f3e7235f 251 PANTHER PTHR24220 5 243 6.0E-121 T 14-09-2016 AY555_RS07590 62a012970e5bc277d6b637f6f3e7235f 251 Gene3D G3DSA:3.40.50.300 3 233 1.0E-45 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS07590 62a012970e5bc277d6b637f6f3e7235f 251 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 5 244 2.5E-105 T 14-09-2016 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 AY555_RS07590 62a012970e5bc277d6b637f6f3e7235f 251 PANTHER PTHR24220:SF85 5 243 6.0E-121 T 14-09-2016 AY555_RS07590 62a012970e5bc277d6b637f6f3e7235f 251 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AY555_RS07590 62a012970e5bc277d6b637f6f3e7235f 251 Pfam PF00005 ABC transporter 19 174 2.1E-18 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AY555_RS09050 f064e5199089ac74bfbe61079d827e01 272 PIRSF PIRSF029730 6 268 6.4E-84 T 14-09-2016 IPR011227 Uncharacterised conserved protein UCP029730 AY555_RS09050 f064e5199089ac74bfbe61079d827e01 272 Pfam PF05013 N-formylglutamate amidohydrolase 28 238 6.5E-39 T 14-09-2016 IPR007709 N-formylglutamate amidohydrolase AY555_RS09050 f064e5199089ac74bfbe61079d827e01 272 SUPERFAMILY SSF53187 12 261 2.79E-63 T 14-09-2016 AY555_RS09050 f064e5199089ac74bfbe61079d827e01 272 Gene3D G3DSA:3.40.630.40 18 260 3.2E-66 T 14-09-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 AY555_RS04030 f347e6d28f39999849d530b69590c8b0 89 Pfam PF00312 Ribosomal protein S15 8 88 2.7E-38 T 14-09-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS04030 f347e6d28f39999849d530b69590c8b0 89 SUPERFAMILY SSF47060 3 89 1.06E-36 T 14-09-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 AY555_RS04030 f347e6d28f39999849d530b69590c8b0 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 8.0E-21 T 14-09-2016 AY555_RS04030 f347e6d28f39999849d530b69590c8b0 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 14-09-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS04030 f347e6d28f39999849d530b69590c8b0 89 SMART SM01387 8 88 1.8E-52 T 14-09-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS04030 f347e6d28f39999849d530b69590c8b0 89 Gene3D G3DSA:1.10.287.10 3 89 8.4E-40 T 14-09-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 AY555_RS04030 f347e6d28f39999849d530b69590c8b0 89 PANTHER PTHR23321 1 88 1.1E-43 T 14-09-2016 AY555_RS04030 f347e6d28f39999849d530b69590c8b0 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.283 T 14-09-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 AY555_RS04030 f347e6d28f39999849d530b69590c8b0 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 7.7E-38 T 14-09-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 AY555_RS06175 cf113d7d26caa9b4ce885c5f22da924d 109 SMART SM00992 5 104 2.7E-51 T 14-09-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 AY555_RS06175 cf113d7d26caa9b4ce885c5f22da924d 109 PANTHER PTHR31350 1 104 3.6E-37 T 14-09-2016 AY555_RS06175 cf113d7d26caa9b4ce885c5f22da924d 109 Pfam PF08755 Hemimethylated DNA-binding protein YccV like 7 94 2.1E-23 T 14-09-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 AY555_RS06175 cf113d7d26caa9b4ce885c5f22da924d 109 TIGRFAM TIGR02097 yccV: hemimethylated DNA binding domain 5 104 1.5E-37 T 14-09-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 AY555_RS06175 cf113d7d26caa9b4ce885c5f22da924d 109 PANTHER PTHR31350:SF6 1 104 3.6E-37 T 14-09-2016 AY555_RS06175 cf113d7d26caa9b4ce885c5f22da924d 109 SUPERFAMILY SSF141255 6 97 9.68E-33 T 14-09-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 AY555_RS09005 a51f981317df18d72a0d49de86f3202d 511 SUPERFAMILY SSF52096 3 250 9.49E-76 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AY555_RS09005 a51f981317df18d72a0d49de86f3202d 511 PANTHER PTHR22855:SF40 1 511 0.0 T 14-09-2016 AY555_RS09005 a51f981317df18d72a0d49de86f3202d 511 SUPERFAMILY SSF52096 255 511 8.72E-88 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AY555_RS09005 a51f981317df18d72a0d49de86f3202d 511 Gene3D G3DSA:3.90.226.10 7 243 8.3E-80 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AY555_RS09005 a51f981317df18d72a0d49de86f3202d 511 Gene3D G3DSA:3.90.226.10 255 511 2.5E-99 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AY555_RS09005 a51f981317df18d72a0d49de86f3202d 511 Pfam PF01039 Carboxyl transferase domain 27 509 1.2E-194 T 14-09-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AY555_RS09005 a51f981317df18d72a0d49de86f3202d 511 PANTHER PTHR22855 1 511 0.0 T 14-09-2016 AY555_RS09065 ceebdad64819e81f9b5946430ce03629 184 Gene3D G3DSA:3.40.50.850 4 180 1.4E-48 T 14-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AY555_RS09065 ceebdad64819e81f9b5946430ce03629 184 PANTHER PTHR14119 6 176 3.8E-46 T 14-09-2016 AY555_RS09065 ceebdad64819e81f9b5946430ce03629 184 Pfam PF00857 Isochorismatase family 8 160 1.0E-25 T 14-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AY555_RS09065 ceebdad64819e81f9b5946430ce03629 184 SUPERFAMILY SSF52499 6 180 2.09E-43 T 14-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AY555_RS05755 8325ea4b42d688e4cdb86a451703b909 169 SUPERFAMILY SSF103642 148 168 2.13E-7 T 14-09-2016 AY555_RS05755 8325ea4b42d688e4cdb86a451703b909 169 Gene3D G3DSA:3.10.450.50 7 168 1.6E-55 T 14-09-2016 IPR032710 NTF2-like domain AY555_RS05755 8325ea4b42d688e4cdb86a451703b909 169 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 7 136 28.387 T 14-09-2016 IPR023006 Uncharacterised protein family UPF0225 AY555_RS05755 8325ea4b42d688e4cdb86a451703b909 169 SUPERFAMILY SSF54427 31 136 1.61E-34 T 14-09-2016 IPR032710 NTF2-like domain AY555_RS05755 8325ea4b42d688e4cdb86a451703b909 169 PANTHER PTHR33747 3 169 2.7E-35 T 14-09-2016 AY555_RS05755 8325ea4b42d688e4cdb86a451703b909 169 Pfam PF02810 SEC-C motif 151 167 2.8E-10 T 14-09-2016 IPR004027 SEC-C motif AY555_RS08620 9f06d65207b2e5acccef14435e236ec9 425 SUPERFAMILY SSF46589 1 112 1.1E-26 T 14-09-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 AY555_RS08620 9f06d65207b2e5acccef14435e236ec9 425 PIRSF PIRSF001529 1 424 5.7E-169 T 14-09-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 AY555_RS08620 9f06d65207b2e5acccef14435e236ec9 425 PRINTS PR00981 Seryl-tRNA synthetase signature 314 327 5.4E-32 T 14-09-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 AY555_RS08620 9f06d65207b2e5acccef14435e236ec9 425 PRINTS PR00981 Seryl-tRNA synthetase signature 331 347 5.4E-32 T 14-09-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 AY555_RS08620 9f06d65207b2e5acccef14435e236ec9 425 PRINTS PR00981 Seryl-tRNA synthetase signature 262 274 5.4E-32 T 14-09-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 AY555_RS08620 9f06d65207b2e5acccef14435e236ec9 425 PRINTS PR00981 Seryl-tRNA synthetase signature 274 287 5.4E-32 T 14-09-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 AY555_RS08620 9f06d65207b2e5acccef14435e236ec9 425 PRINTS PR00981 Seryl-tRNA synthetase signature 349 365 5.4E-32 T 14-09-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 AY555_RS08620 9f06d65207b2e5acccef14435e236ec9 425 Gene3D G3DSA:3.30.930.10 105 419 1.1E-139 T 14-09-2016 AY555_RS08620 9f06d65207b2e5acccef14435e236ec9 425 SUPERFAMILY SSF55681 116 417 4.42E-96 T 14-09-2016 AY555_RS08620 9f06d65207b2e5acccef14435e236ec9 425 PANTHER PTHR11778 1 421 8.3E-202 T 14-09-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 AY555_RS08620 9f06d65207b2e5acccef14435e236ec9 425 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 420 40.77 T 14-09-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 AY555_RS08620 9f06d65207b2e5acccef14435e236ec9 425 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 4.3E-28 T 14-09-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 AY555_RS08620 9f06d65207b2e5acccef14435e236ec9 425 Gene3D G3DSA:1.10.287.40 1 104 2.3E-25 T 14-09-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 AY555_RS08620 9f06d65207b2e5acccef14435e236ec9 425 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 223 398 4.4E-33 T 14-09-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS08620 9f06d65207b2e5acccef14435e236ec9 425 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 415 1.1E-158 T 14-09-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 AY555_RS09175 b9e211cd54a4ae553f74784217b77efe 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 3.4E-22 T 14-09-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS09175 b9e211cd54a4ae553f74784217b77efe 55 PANTHER PTHR15238 1 55 5.1E-24 T 14-09-2016 AY555_RS09175 b9e211cd54a4ae553f74784217b77efe 55 Pfam PF00471 Ribosomal protein L33 7 53 1.3E-16 T 14-09-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS09175 b9e211cd54a4ae553f74784217b77efe 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 2 53 13.638 T 14-09-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS09175 b9e211cd54a4ae553f74784217b77efe 55 SUPERFAMILY SSF57829 1 53 2.62E-18 T 14-09-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 AY555_RS00935 b39c5d6a9182c63db5d32e3c3fbfe327 225 SMART SM00322 59 124 1.5E-7 T 14-09-2016 IPR004087 K Homology domain GO:0003676 AY555_RS00935 b39c5d6a9182c63db5d32e3c3fbfe327 225 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 39.226 T 14-09-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AY555_RS00935 b39c5d6a9182c63db5d32e3c3fbfe327 225 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 7.4E-37 T 14-09-2016 AY555_RS00935 b39c5d6a9182c63db5d32e3c3fbfe327 225 Pfam PF07650 KH domain 38 109 1.1E-21 T 14-09-2016 IPR004044 K Homology domain, type 2 GO:0003723 AY555_RS00935 b39c5d6a9182c63db5d32e3c3fbfe327 225 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 8.5E-93 T 14-09-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AY555_RS00935 b39c5d6a9182c63db5d32e3c3fbfe327 225 Gene3D G3DSA:3.30.300.20 17 106 3.4E-34 T 14-09-2016 IPR015946 K homology domain-like, alpha/beta AY555_RS00935 b39c5d6a9182c63db5d32e3c3fbfe327 225 Gene3D G3DSA:3.30.1140.32 107 206 1.5E-44 T 14-09-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 AY555_RS00935 b39c5d6a9182c63db5d32e3c3fbfe327 225 SUPERFAMILY SSF54814 2 105 7.85E-40 T 14-09-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 AY555_RS00935 b39c5d6a9182c63db5d32e3c3fbfe327 225 PANTHER PTHR11760 2 225 5.0E-134 T 14-09-2016 AY555_RS00935 b39c5d6a9182c63db5d32e3c3fbfe327 225 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 14-09-2016 IPR018280 Ribosomal protein S3, conserved site AY555_RS00935 b39c5d6a9182c63db5d32e3c3fbfe327 225 PANTHER PTHR11760:SF19 2 225 5.0E-134 T 14-09-2016 AY555_RS00935 b39c5d6a9182c63db5d32e3c3fbfe327 225 SUPERFAMILY SSF54821 107 205 1.31E-38 T 14-09-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 AY555_RS05715 bdfcb9367bbf597267e2ba4cedf6f42f 236 PANTHER PTHR13136 36 225 1.7E-46 T 14-09-2016 IPR026555 KAT8 regulatory NSL complex subunit 3/Testis-expressed sequence 30 protein AY555_RS05715 bdfcb9367bbf597267e2ba4cedf6f42f 236 SUPERFAMILY SSF53474 26 203 2.1E-22 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AY555_RS05715 bdfcb9367bbf597267e2ba4cedf6f42f 236 Gene3D G3DSA:3.40.50.1820 31 201 2.2E-23 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AY555_RS05715 bdfcb9367bbf597267e2ba4cedf6f42f 236 PANTHER PTHR13136:SF4 36 225 1.7E-46 T 14-09-2016 AY555_RS03730 9088293b9819fc93b1f326c51b981a1b 129 SUPERFAMILY SSF47413 3 58 4.02E-12 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AY555_RS03730 9088293b9819fc93b1f326c51b981a1b 129 Pfam PF13560 Helix-turn-helix domain 4 64 4.9E-12 T 14-09-2016 AY555_RS03730 9088293b9819fc93b1f326c51b981a1b 129 Gene3D G3DSA:1.10.260.40 4 58 6.2E-13 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AY555_RS03730 9088293b9819fc93b1f326c51b981a1b 129 SMART SM00530 7 63 2.7E-9 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AY555_RS02300 cdd571779986776e5b15e3d1f52a896c 420 Pfam PF00675 Insulinase (Peptidase family M16) 13 160 3.8E-42 T 14-09-2016 IPR011765 Peptidase M16, N-terminal AY555_RS02300 cdd571779986776e5b15e3d1f52a896c 420 Gene3D G3DSA:3.30.830.10 12 222 1.3E-59 T 14-09-2016 IPR011237 Peptidase M16 domain GO:0046872 AY555_RS02300 cdd571779986776e5b15e3d1f52a896c 420 PANTHER PTHR11851 3 415 2.1E-131 T 14-09-2016 AY555_RS02300 cdd571779986776e5b15e3d1f52a896c 420 SUPERFAMILY SSF63411 220 412 1.59E-45 T 14-09-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AY555_RS02300 cdd571779986776e5b15e3d1f52a896c 420 Gene3D G3DSA:3.30.830.10 223 412 1.4E-58 T 14-09-2016 IPR011237 Peptidase M16 domain GO:0046872 AY555_RS02300 cdd571779986776e5b15e3d1f52a896c 420 SUPERFAMILY SSF63411 2 216 3.12E-61 T 14-09-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AY555_RS02300 cdd571779986776e5b15e3d1f52a896c 420 Pfam PF05193 Peptidase M16 inactive domain 166 338 9.8E-37 T 14-09-2016 IPR007863 Peptidase M16, C-terminal AY555_RS02300 cdd571779986776e5b15e3d1f52a896c 420 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 34 57 - T 14-09-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 AY555_RS06680 ecd1edde3d90aa6f5334f250cb9f2b5c 263 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AY555_RS06680 ecd1edde3d90aa6f5334f250cb9f2b5c 263 PANTHER PTHR24220 23 262 3.7E-161 T 14-09-2016 AY555_RS06680 ecd1edde3d90aa6f5334f250cb9f2b5c 263 Pfam PF00005 ABC transporter 37 185 6.3E-36 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AY555_RS06680 ecd1edde3d90aa6f5334f250cb9f2b5c 263 PANTHER PTHR24220:SF474 23 262 3.7E-161 T 14-09-2016 AY555_RS06680 ecd1edde3d90aa6f5334f250cb9f2b5c 263 SMART SM00382 46 233 3.3E-17 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS06680 ecd1edde3d90aa6f5334f250cb9f2b5c 263 Gene3D G3DSA:3.40.50.300 21 257 7.2E-84 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS06680 ecd1edde3d90aa6f5334f250cb9f2b5c 263 PIRSF PIRSF039085 18 261 1.4E-108 T 14-09-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AY555_RS06680 ecd1edde3d90aa6f5334f250cb9f2b5c 263 SUPERFAMILY SSF52540 21 255 2.54E-81 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS07260 fa3ac6b907ea695539a7530d55659c6b 413 TIGRFAM TIGR03862 flavo_PP4765: flavoprotein, TIGR03862 family 32 406 4.2E-156 T 14-09-2016 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 AY555_RS07260 fa3ac6b907ea695539a7530d55659c6b 413 SUPERFAMILY SSF51905 345 400 2.46E-39 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS07260 fa3ac6b907ea695539a7530d55659c6b 413 SUPERFAMILY SSF51905 7 196 2.46E-39 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS07260 fa3ac6b907ea695539a7530d55659c6b 413 PANTHER PTHR10617 338 410 5.9E-42 T 14-09-2016 AY555_RS07260 fa3ac6b907ea695539a7530d55659c6b 413 PANTHER PTHR10617 4 306 5.9E-42 T 14-09-2016 AY555_RS07260 fa3ac6b907ea695539a7530d55659c6b 413 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 10 398 1.4E-79 T 14-09-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like AY555_RS07260 fa3ac6b907ea695539a7530d55659c6b 413 PANTHER PTHR10617:SF103 338 410 5.9E-42 T 14-09-2016 AY555_RS07260 fa3ac6b907ea695539a7530d55659c6b 413 PANTHER PTHR10617:SF103 4 306 5.9E-42 T 14-09-2016 AY555_RS07260 fa3ac6b907ea695539a7530d55659c6b 413 Pfam PF03486 HI0933-like protein 9 399 1.5E-94 T 14-09-2016 AY555_RS07260 fa3ac6b907ea695539a7530d55659c6b 413 Gene3D G3DSA:3.50.50.60 279 280 9.8E-32 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS07260 fa3ac6b907ea695539a7530d55659c6b 413 Gene3D G3DSA:3.50.50.60 367 400 9.8E-32 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS07260 fa3ac6b907ea695539a7530d55659c6b 413 Gene3D G3DSA:3.50.50.60 8 194 9.8E-32 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS07260 fa3ac6b907ea695539a7530d55659c6b 413 SUPERFAMILY SSF160996 200 345 3.4E-9 T 14-09-2016 AY555_RS00855 68656c10901a4f221dce26e6cf058178 122 Gene3D G3DSA:1.10.8.50 2 72 2.5E-29 T 14-09-2016 AY555_RS00855 68656c10901a4f221dce26e6cf058178 122 PANTHER PTHR10871 1 122 4.1E-68 T 14-09-2016 AY555_RS00855 68656c10901a4f221dce26e6cf058178 122 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 3.6E-55 T 14-09-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00855 68656c10901a4f221dce26e6cf058178 122 PIRSF PIRSF002134 1 122 7.6E-47 T 14-09-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00855 68656c10901a4f221dce26e6cf058178 122 Gene3D G3DSA:4.10.910.10 73 122 4.5E-30 T 14-09-2016 IPR027437 30s ribosomal protein S13, C-terminal AY555_RS00855 68656c10901a4f221dce26e6cf058178 122 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 14-09-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 AY555_RS00855 68656c10901a4f221dce26e6cf058178 122 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 120 28.778 T 14-09-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00855 68656c10901a4f221dce26e6cf058178 122 Pfam PF00416 Ribosomal protein S13/S18 3 109 1.0E-32 T 14-09-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00855 68656c10901a4f221dce26e6cf058178 122 SUPERFAMILY SSF46946 2 121 1.91E-47 T 14-09-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AY555_RS01370 12ed52203742838a37057c79ef6d36e4 293 SUPERFAMILY SSF53850 8 188 1.74E-57 T 14-09-2016 AY555_RS01370 12ed52203742838a37057c79ef6d36e4 293 Gene3D G3DSA:3.40.190.10 94 172 3.9E-25 T 14-09-2016 AY555_RS01370 12ed52203742838a37057c79ef6d36e4 293 PIRSF PIRSF001500 2 279 3.6E-62 T 14-09-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 AY555_RS01370 12ed52203742838a37057c79ef6d36e4 293 Gene3D G3DSA:3.30.70.260 194 278 7.8E-22 T 14-09-2016 AY555_RS01370 12ed52203742838a37057c79ef6d36e4 293 Pfam PF00800 Prephenate dehydratase 10 185 1.5E-53 T 14-09-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 AY555_RS01370 12ed52203742838a37057c79ef6d36e4 293 Gene3D G3DSA:3.40.190.10 5 93 5.0E-30 T 14-09-2016 AY555_RS01370 12ed52203742838a37057c79ef6d36e4 293 PANTHER PTHR21022:SF0 2 293 7.3E-88 T 14-09-2016 AY555_RS01370 12ed52203742838a37057c79ef6d36e4 293 PANTHER PTHR21022 2 293 7.3E-88 T 14-09-2016 AY555_RS01370 12ed52203742838a37057c79ef6d36e4 293 SUPERFAMILY SSF55021 179 278 3.34E-20 T 14-09-2016 AY555_RS07850 4e91cd95e283c5f4c5f4c701462e3bf6 135 PRINTS PR00604 Class IA and IB cytochrome C signature 125 133 2.0E-10 T 14-09-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AY555_RS07850 4e91cd95e283c5f4c5f4c701462e3bf6 135 PRINTS PR00604 Class IA and IB cytochrome C signature 49 64 2.0E-10 T 14-09-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AY555_RS07850 4e91cd95e283c5f4c5f4c701462e3bf6 135 PRINTS PR00604 Class IA and IB cytochrome C signature 65 75 2.0E-10 T 14-09-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AY555_RS07850 4e91cd95e283c5f4c5f4c701462e3bf6 135 PRINTS PR00604 Class IA and IB cytochrome C signature 82 98 2.0E-10 T 14-09-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AY555_RS07850 4e91cd95e283c5f4c5f4c701462e3bf6 135 PRINTS PR00604 Class IA and IB cytochrome C signature 36 43 2.0E-10 T 14-09-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AY555_RS07850 4e91cd95e283c5f4c5f4c701462e3bf6 135 Gene3D G3DSA:1.10.760.10 24 134 2.4E-33 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AY555_RS07850 4e91cd95e283c5f4c5f4c701462e3bf6 135 Pfam PF00034 Cytochrome c 27 135 1.6E-9 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AY555_RS07850 4e91cd95e283c5f4c5f4c701462e3bf6 135 PANTHER PTHR11961 25 133 2.6E-17 T 14-09-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AY555_RS07850 4e91cd95e283c5f4c5f4c701462e3bf6 135 SUPERFAMILY SSF46626 23 135 1.22E-28 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AY555_RS06735 e7de39dbeb6fe83c41646cae087c0253 228 SUPERFAMILY SSF53328 13 206 2.49E-61 T 14-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AY555_RS06735 e7de39dbeb6fe83c41646cae087c0253 228 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 13 198 31.486 T 14-09-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 AY555_RS06735 e7de39dbeb6fe83c41646cae087c0253 228 Pfam PF00551 Formyl transferase 13 192 3.1E-56 T 14-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AY555_RS06735 e7de39dbeb6fe83c41646cae087c0253 228 PANTHER PTHR10520 1 204 1.1E-98 T 14-09-2016 AY555_RS06735 e7de39dbeb6fe83c41646cae087c0253 228 Gene3D G3DSA:3.40.50.170 12 207 1.8E-66 T 14-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AY555_RS06735 e7de39dbeb6fe83c41646cae087c0253 228 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 12 200 2.2E-71 T 14-09-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 AY555_RS07990 3a18bae2a46ae5f154c98c8c34b4e0cc 245 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 5 237 2.9E-97 T 14-09-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 AY555_RS07990 3a18bae2a46ae5f154c98c8c34b4e0cc 245 Gene3D G3DSA:3.20.20.70 4 241 4.8E-101 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS07990 3a18bae2a46ae5f154c98c8c34b4e0cc 245 PANTHER PTHR30456 2 244 1.2E-123 T 14-09-2016 AY555_RS07990 3a18bae2a46ae5f154c98c8c34b4e0cc 245 PANTHER PTHR30456:SF0 2 244 1.2E-123 T 14-09-2016 AY555_RS07990 3a18bae2a46ae5f154c98c8c34b4e0cc 245 SUPERFAMILY SSF63892 4 241 1.7E-93 T 14-09-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 AY555_RS07990 3a18bae2a46ae5f154c98c8c34b4e0cc 245 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 242 114.553 T 14-09-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 AY555_RS07990 3a18bae2a46ae5f154c98c8c34b4e0cc 245 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 5 238 5.1E-84 T 14-09-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 AY555_RS06230 713a51b01593ab3196cc68628c89df21 320 Pfam PF00472 RF-1 domain 173 282 4.5E-40 T 14-09-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AY555_RS06230 713a51b01593ab3196cc68628c89df21 320 SUPERFAMILY SSF75620 1 309 2.22E-123 T 14-09-2016 AY555_RS06230 713a51b01593ab3196cc68628c89df21 320 Pfam PF03462 PCRF domain 2 164 3.6E-52 T 14-09-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 AY555_RS06230 713a51b01593ab3196cc68628c89df21 320 Gene3D G3DSA:3.30.160.20 172 249 3.2E-37 T 14-09-2016 IPR014720 Double-stranded RNA-binding domain AY555_RS06230 713a51b01593ab3196cc68628c89df21 320 PANTHER PTHR11075 1 317 2.1E-152 T 14-09-2016 AY555_RS06230 713a51b01593ab3196cc68628c89df21 320 Gene3D G3DSA:1.20.58.410 1 56 1.4E-5 T 14-09-2016 AY555_RS06230 713a51b01593ab3196cc68628c89df21 320 SMART SM00937 29 139 1.6E-54 T 14-09-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 AY555_RS06230 713a51b01593ab3196cc68628c89df21 320 PANTHER PTHR11075:SF6 1 317 2.1E-152 T 14-09-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 AY555_RS06230 713a51b01593ab3196cc68628c89df21 320 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 189 205 - T 14-09-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AY555_RS06230 713a51b01593ab3196cc68628c89df21 320 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 309 9.7E-144 T 14-09-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 AY555_RS08135 792f5926a66f7e6266c88abefbb3686c 364 Gene3D G3DSA:1.10.12.10 280 336 1.3E-5 T 14-09-2016 IPR014748 Crontonase, C-terminal AY555_RS08135 792f5926a66f7e6266c88abefbb3686c 364 Pfam PF16113 Enoyl-CoA hydratase/isomerase 23 353 1.8E-119 T 14-09-2016 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 AY555_RS08135 792f5926a66f7e6266c88abefbb3686c 364 PANTHER PTHR11941 259 336 2.8E-121 T 14-09-2016 AY555_RS08135 792f5926a66f7e6266c88abefbb3686c 364 Gene3D G3DSA:3.90.226.10 12 207 8.1E-54 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AY555_RS08135 792f5926a66f7e6266c88abefbb3686c 364 SUPERFAMILY SSF52096 267 336 1.21E-63 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AY555_RS08135 792f5926a66f7e6266c88abefbb3686c 364 SUPERFAMILY SSF52096 12 204 1.21E-63 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AY555_RS08135 792f5926a66f7e6266c88abefbb3686c 364 PANTHER PTHR11941:SF53 2 196 2.8E-121 T 14-09-2016 AY555_RS08135 792f5926a66f7e6266c88abefbb3686c 364 PANTHER PTHR11941:SF53 259 336 2.8E-121 T 14-09-2016 AY555_RS08135 792f5926a66f7e6266c88abefbb3686c 364 PANTHER PTHR11941 2 196 2.8E-121 T 14-09-2016 AY555_RS03385 65fc1b8a1403f77d5080fcf2928e2ebb 261 PANTHER PTHR42208:SF1 21 260 4.0E-16 T 14-09-2016 AY555_RS03385 65fc1b8a1403f77d5080fcf2928e2ebb 261 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 31 242 2.5E-33 T 14-09-2016 AY555_RS03385 65fc1b8a1403f77d5080fcf2928e2ebb 261 PANTHER PTHR42208 21 260 4.0E-16 T 14-09-2016 AY555_RS09740 e045576d937540e8fdc25e39724bb2ce 334 PANTHER PTHR12001 18 334 5.0E-111 T 14-09-2016 IPR017446 Polyprenyl synthetase-related AY555_RS09740 e045576d937540e8fdc25e39724bb2ce 334 Pfam PF00348 Polyprenyl synthetase 42 286 6.0E-72 T 14-09-2016 IPR000092 Polyprenyl synthetase GO:0008299 AY555_RS09740 e045576d937540e8fdc25e39724bb2ce 334 PANTHER PTHR12001:SF47 18 334 5.0E-111 T 14-09-2016 AY555_RS09740 e045576d937540e8fdc25e39724bb2ce 334 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 91 105 - T 14-09-2016 IPR000092 Polyprenyl synthetase GO:0008299 AY555_RS09740 e045576d937540e8fdc25e39724bb2ce 334 Gene3D G3DSA:1.10.600.10 17 332 1.2E-101 T 14-09-2016 IPR008949 Isoprenoid synthase domain AY555_RS09740 e045576d937540e8fdc25e39724bb2ce 334 SUPERFAMILY SSF48576 17 333 1.76E-98 T 14-09-2016 IPR008949 Isoprenoid synthase domain AY555_RS02590 a5a88d0e450e792351a1e0afe202c66d 342 Gene3D G3DSA:3.40.50.2000 159 316 2.4E-22 T 14-09-2016 AY555_RS02590 a5a88d0e450e792351a1e0afe202c66d 342 Pfam PF13439 Glycosyltransferase Family 4 31 149 2.4E-12 T 14-09-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AY555_RS02590 a5a88d0e450e792351a1e0afe202c66d 342 Pfam PF00534 Glycosyl transferases group 1 157 311 2.3E-27 T 14-09-2016 IPR001296 Glycosyl transferase, family 1 AY555_RS02590 a5a88d0e450e792351a1e0afe202c66d 342 SUPERFAMILY SSF53756 23 335 8.52E-66 T 14-09-2016 AY555_RS02590 a5a88d0e450e792351a1e0afe202c66d 342 PANTHER PTHR12526 24 335 1.8E-51 T 14-09-2016 AY555_RS05515 e3cbe7ca6c51cb59f7701aaf5a851f22 336 Pfam PF04055 Radical SAM superfamily 32 181 2.9E-17 T 14-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AY555_RS05515 e3cbe7ca6c51cb59f7701aaf5a851f22 336 SMART SM00729 26 241 0.0013 T 14-09-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AY555_RS05515 e3cbe7ca6c51cb59f7701aaf5a851f22 336 SUPERFAMILY SSF102114 23 307 6.28E-45 T 14-09-2016 AY555_RS05515 e3cbe7ca6c51cb59f7701aaf5a851f22 336 PANTHER PTHR11228 25 214 2.2E-23 T 14-09-2016 AY555_RS05515 e3cbe7ca6c51cb59f7701aaf5a851f22 336 PANTHER PTHR11228:SF7 25 214 2.2E-23 T 14-09-2016 AY555_RS05515 e3cbe7ca6c51cb59f7701aaf5a851f22 336 Pfam PF13186 Iron-sulfur cluster-binding domain 240 307 1.0E-8 T 14-09-2016 IPR023885 4Fe4S-binding SPASM domain AY555_RS05515 e3cbe7ca6c51cb59f7701aaf5a851f22 336 Gene3D G3DSA:3.20.20.70 23 307 1.0E-40 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS01690 cf541e580cd135d16252e43b7384d65c 330 SMART SM00382 63 209 4.0E-4 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS01690 cf541e580cd135d16252e43b7384d65c 330 Gene3D G3DSA:3.40.50.300 56 229 1.8E-25 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS01690 cf541e580cd135d16252e43b7384d65c 330 Pfam PF07728 AAA domain (dynein-related subfamily) 67 189 2.1E-11 T 14-09-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AY555_RS01690 cf541e580cd135d16252e43b7384d65c 330 Pfam PF12556 Cobaltochelatase CobS subunit N terminal 10 40 1.1E-18 T 14-09-2016 IPR025865 Cobaltochelatase subunit CobS N-terminal domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 AY555_RS01690 cf541e580cd135d16252e43b7384d65c 330 TIGRFAM TIGR01650 PD_CobS: cobaltochelatase, CobS subunit 10 324 1.4E-180 T 14-09-2016 IPR006537 Cobaltochelatase subunit CobS KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 AY555_RS01690 cf541e580cd135d16252e43b7384d65c 330 SUPERFAMILY SSF52540 38 289 7.19E-32 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04205 aac38105a0ab5daed18ff04a248639de 601 Gene3D G3DSA:2.40.30.10 198 292 1.6E-24 T 14-09-2016 AY555_RS04205 aac38105a0ab5daed18ff04a248639de 601 Gene3D G3DSA:3.40.50.300 2 197 4.2E-55 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04205 aac38105a0ab5daed18ff04a248639de 601 PANTHER PTHR23115 1 376 0.0 T 14-09-2016 AY555_RS04205 aac38105a0ab5daed18ff04a248639de 601 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 14-09-2016 IPR031157 Tr-type G domain, conserved site AY555_RS04205 aac38105a0ab5daed18ff04a248639de 601 Pfam PF03144 Elongation factor Tu domain 2 208 278 4.9E-11 T 14-09-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 AY555_RS04205 aac38105a0ab5daed18ff04a248639de 601 Gene3D G3DSA:3.30.70.240 404 491 9.2E-21 T 14-09-2016 IPR000640 Translation elongation factor EFG, V domain AY555_RS04205 aac38105a0ab5daed18ff04a248639de 601 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 177 7.5E-18 T 14-09-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AY555_RS04205 aac38105a0ab5daed18ff04a248639de 601 Pfam PF00009 Elongation factor Tu GTP binding domain 6 184 4.1E-50 T 14-09-2016 AY555_RS04205 aac38105a0ab5daed18ff04a248639de 601 SUPERFAMILY SSF52540 1 233 5.32E-54 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04205 aac38105a0ab5daed18ff04a248639de 601 SUPERFAMILY SSF54980 402 496 1.2E-24 T 14-09-2016 IPR009022 Elongation factor G, III-V domain AY555_RS04205 aac38105a0ab5daed18ff04a248639de 601 Hamap MF_00071 Elongation factor 4 [lepA]. 1 600 304.954 T 14-09-2016 IPR006297 Elongation factor 4 GO:0005525 AY555_RS04205 aac38105a0ab5daed18ff04a248639de 601 PRINTS PR00315 GTP-binding elongation factor signature 129 138 3.2E-13 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AY555_RS04205 aac38105a0ab5daed18ff04a248639de 601 PRINTS PR00315 GTP-binding elongation factor signature 93 104 3.2E-13 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AY555_RS04205 aac38105a0ab5daed18ff04a248639de 601 PRINTS PR00315 GTP-binding elongation factor signature 52 60 3.2E-13 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AY555_RS04205 aac38105a0ab5daed18ff04a248639de 601 PRINTS PR00315 GTP-binding elongation factor signature 77 87 3.2E-13 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AY555_RS04205 aac38105a0ab5daed18ff04a248639de 601 PRINTS PR00315 GTP-binding elongation factor signature 9 22 3.2E-13 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AY555_RS04205 aac38105a0ab5daed18ff04a248639de 601 Pfam PF00679 Elongation factor G C-terminus 402 481 3.2E-20 T 14-09-2016 IPR000640 Translation elongation factor EFG, V domain AY555_RS04205 aac38105a0ab5daed18ff04a248639de 601 Gene3D G3DSA:3.30.70.870 296 372 7.7E-24 T 14-09-2016 AY555_RS04205 aac38105a0ab5daed18ff04a248639de 601 PANTHER PTHR23115:SF175 400 598 0.0 T 14-09-2016 AY555_RS04205 aac38105a0ab5daed18ff04a248639de 601 PANTHER PTHR23115:SF175 1 376 0.0 T 14-09-2016 AY555_RS04205 aac38105a0ab5daed18ff04a248639de 601 PANTHER PTHR23115 400 598 0.0 T 14-09-2016 AY555_RS04205 aac38105a0ab5daed18ff04a248639de 601 SUPERFAMILY SSF54980 296 373 6.47E-17 T 14-09-2016 IPR009022 Elongation factor G, III-V domain AY555_RS04205 aac38105a0ab5daed18ff04a248639de 601 Pfam PF06421 GTP-binding protein LepA C-terminus 490 595 1.8E-50 T 14-09-2016 IPR013842 GTP-binding protein LepA, C-terminal AY555_RS04205 aac38105a0ab5daed18ff04a248639de 601 TIGRFAM TIGR01393 lepA: elongation factor 4 6 597 2.0E-293 T 14-09-2016 IPR006297 Elongation factor 4 GO:0005525 AY555_RS01625 34e7eecaf1b310bf668db6dc524e625f 383 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 20 363 6.5E-115 T 14-09-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 AY555_RS01625 34e7eecaf1b310bf668db6dc524e625f 383 PIRSF PIRSF001455 12 374 1.9E-107 T 14-09-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 AY555_RS01625 34e7eecaf1b310bf668db6dc524e625f 383 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 9 371 40.695 T 14-09-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 AY555_RS01625 34e7eecaf1b310bf668db6dc524e625f 383 PANTHER PTHR21090 4 373 6.2E-163 T 14-09-2016 AY555_RS01625 34e7eecaf1b310bf668db6dc524e625f 383 SUPERFAMILY SSF56796 12 370 3.93E-113 T 14-09-2016 AY555_RS01625 34e7eecaf1b310bf668db6dc524e625f 383 Gene3D G3DSA:1.20.1090.10 181 369 2.6E-63 T 14-09-2016 AY555_RS01625 34e7eecaf1b310bf668db6dc524e625f 383 Pfam PF01761 3-dehydroquinate synthase 76 338 2.0E-101 T 14-09-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 AY555_RS01625 34e7eecaf1b310bf668db6dc524e625f 383 Gene3D G3DSA:3.40.50.1970 11 180 6.4E-67 T 14-09-2016 AY555_RS02725 03d856f56957e9b34a6bb7e2704a70eb 144 Pfam PF07409 Phage protein GP46 25 135 4.5E-35 T 14-09-2016 IPR010877 Bacteriophage Mu, Gp46 AY555_RS07080 fc00703ada54bde3096d5b6020c00f91 110 Pfam PF13466 STAS domain 17 94 6.5E-11 T 14-09-2016 IPR002645 STAS domain AY555_RS07080 fc00703ada54bde3096d5b6020c00f91 110 SUPERFAMILY SSF52091 1 103 7.46E-15 T 14-09-2016 IPR002645 STAS domain AY555_RS07080 fc00703ada54bde3096d5b6020c00f91 110 Gene3D G3DSA:3.30.750.24 2 102 7.0E-13 T 14-09-2016 IPR002645 STAS domain AY555_RS02100 5b54545509e46ebff489be2e21ecaf8a 192 PANTHER PTHR33602:SF1 13 179 3.3E-17 T 14-09-2016 AY555_RS02100 5b54545509e46ebff489be2e21ecaf8a 192 Pfam PF02631 RecX family 56 178 2.2E-21 T 14-09-2016 IPR003783 Regulatory protein RecX GO:0006282 AY555_RS02100 5b54545509e46ebff489be2e21ecaf8a 192 Hamap MF_01114 Regulatory protein RecX [recX]. 9 184 12.053 T 14-09-2016 IPR003783 Regulatory protein RecX GO:0006282 AY555_RS02100 5b54545509e46ebff489be2e21ecaf8a 192 Gene3D G3DSA:1.10.10.10 74 115 5.4E-9 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS02100 5b54545509e46ebff489be2e21ecaf8a 192 PANTHER PTHR33602 13 179 3.3E-17 T 14-09-2016 AY555_RS01455 bfdb3b99ed0722f0df1fbc2ea6238b0e 405 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 393 8.3E-72 T 14-09-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AY555_RS01455 bfdb3b99ed0722f0df1fbc2ea6238b0e 405 Gene3D G3DSA:3.40.718.10 3 403 3.3E-176 T 14-09-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AY555_RS01455 bfdb3b99ed0722f0df1fbc2ea6238b0e 405 SUPERFAMILY SSF53659 1 403 8.64E-156 T 14-09-2016 AY555_RS01455 bfdb3b99ed0722f0df1fbc2ea6238b0e 405 TIGRFAM TIGR00127 nadp_idh_euk: isocitrate dehydrogenase, NADP-dependent 2 403 5.7E-213 T 14-09-2016 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AY555_RS01455 bfdb3b99ed0722f0df1fbc2ea6238b0e 405 SMART SM01329 9 395 8.1E-136 T 14-09-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AY555_RS01455 bfdb3b99ed0722f0df1fbc2ea6238b0e 405 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 270 289 - T 14-09-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 AY555_RS01455 bfdb3b99ed0722f0df1fbc2ea6238b0e 405 PIRSF PIRSF000108 1 405 1.7E-224 T 14-09-2016 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AY555_RS01455 bfdb3b99ed0722f0df1fbc2ea6238b0e 405 PANTHER PTHR11822 1 404 0.0 T 14-09-2016 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AY555_RS06015 b81c6648ea8985bf01824a94b1766503 235 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 86 104 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS06015 b81c6648ea8985bf01824a94b1766503 235 SUPERFAMILY SSF51120 18 155 1.16E-24 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS06015 b81c6648ea8985bf01824a94b1766503 235 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 104 122 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS06015 b81c6648ea8985bf01824a94b1766503 235 PRINTS PR00313 NodO calcium binding signature 117 126 4.0E-8 T 14-09-2016 AY555_RS06015 b81c6648ea8985bf01824a94b1766503 235 PRINTS PR00313 NodO calcium binding signature 87 98 4.0E-8 T 14-09-2016 AY555_RS06015 b81c6648ea8985bf01824a94b1766503 235 PRINTS PR00313 NodO calcium binding signature 99 107 4.0E-8 T 14-09-2016 AY555_RS06015 b81c6648ea8985bf01824a94b1766503 235 PRINTS PR00313 NodO calcium binding signature 108 116 4.0E-8 T 14-09-2016 AY555_RS06015 b81c6648ea8985bf01824a94b1766503 235 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 95 113 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS06015 b81c6648ea8985bf01824a94b1766503 235 Gene3D G3DSA:2.150.10.10 24 155 1.6E-22 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS09035 94b6e9a6bb5b91001b164bdfcad8a740 584 Gene3D G3DSA:2.30.38.10 384 445 9.4E-23 T 14-09-2016 AY555_RS09035 94b6e9a6bb5b91001b164bdfcad8a740 584 SUPERFAMILY SSF56801 324 582 3.66E-121 T 14-09-2016 AY555_RS09035 94b6e9a6bb5b91001b164bdfcad8a740 584 SUPERFAMILY SSF56801 1 276 3.66E-121 T 14-09-2016 AY555_RS09035 94b6e9a6bb5b91001b164bdfcad8a740 584 Pfam PF00501 AMP-binding enzyme 17 453 2.8E-99 T 14-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AY555_RS09035 94b6e9a6bb5b91001b164bdfcad8a740 584 Gene3D G3DSA:3.40.50.980 321 383 9.8E-29 T 14-09-2016 AY555_RS09035 94b6e9a6bb5b91001b164bdfcad8a740 584 Gene3D G3DSA:3.40.50.980 178 271 9.8E-29 T 14-09-2016 AY555_RS09035 94b6e9a6bb5b91001b164bdfcad8a740 584 PANTHER PTHR24096 1 584 1.2E-171 T 14-09-2016 AY555_RS09035 94b6e9a6bb5b91001b164bdfcad8a740 584 Gene3D G3DSA:3.40.50.980 26 177 1.2E-32 T 14-09-2016 AY555_RS09035 94b6e9a6bb5b91001b164bdfcad8a740 584 PANTHER PTHR24096:SF193 1 584 1.2E-171 T 14-09-2016 AY555_RS09035 94b6e9a6bb5b91001b164bdfcad8a740 584 Gene3D G3DSA:3.30.300.30 452 572 3.2E-8 T 14-09-2016 AY555_RS05400 f860c5351f288349927693ae7417c8be 909 Pfam PF13709 Domain of unknown function (DUF4159) 693 889 1.3E-41 T 14-09-2016 IPR025297 Domain of unknown function DUF4159 AY555_RS05400 f860c5351f288349927693ae7417c8be 909 TIGRFAM TIGR02226 two_anch: N-terminal double-transmembrane domain 6 84 2.3E-14 T 14-09-2016 IPR011933 Double transmembrane domain AY555_RS05400 f860c5351f288349927693ae7417c8be 909 Pfam PF07584 Aerotolerance regulator N-terminal 9 80 4.9E-11 T 14-09-2016 IPR024163 Aerotolerance regulator, N-terminal AY555_RS05400 f860c5351f288349927693ae7417c8be 909 SUPERFAMILY SSF52317 346 518 9.15E-5 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AY555_RS07800 03e00d61e6bfc2a4ee1165c7b820e553 776 PANTHER PTHR12815 10 776 1.2E-170 T 14-09-2016 AY555_RS07800 03e00d61e6bfc2a4ee1165c7b820e553 776 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 5 776 23.739 T 14-09-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AY555_RS07800 03e00d61e6bfc2a4ee1165c7b820e553 776 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 39 776 3.6E-231 T 14-09-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AY555_RS07800 03e00d61e6bfc2a4ee1165c7b820e553 776 Pfam PF01103 Surface antigen 458 776 1.1E-71 T 14-09-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 AY555_RS07800 03e00d61e6bfc2a4ee1165c7b820e553 776 PANTHER PTHR12815:SF11 10 776 1.2E-170 T 14-09-2016 AY555_RS07800 03e00d61e6bfc2a4ee1165c7b820e553 776 PIRSF PIRSF006076 5 776 1.5E-243 T 14-09-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AY555_RS07800 03e00d61e6bfc2a4ee1165c7b820e553 776 Gene3D G3DSA:2.40.160.50 400 773 6.4E-12 T 14-09-2016 AY555_RS07800 03e00d61e6bfc2a4ee1165c7b820e553 776 Pfam PF07244 Surface antigen variable number repeat 357 431 3.5E-13 T 14-09-2016 IPR010827 Surface antigen variable number GO:0019867 AY555_RS07800 03e00d61e6bfc2a4ee1165c7b820e553 776 Pfam PF07244 Surface antigen variable number repeat 105 181 1.1E-14 T 14-09-2016 IPR010827 Surface antigen variable number GO:0019867 AY555_RS07800 03e00d61e6bfc2a4ee1165c7b820e553 776 Pfam PF07244 Surface antigen variable number repeat 39 98 1.7E-4 T 14-09-2016 IPR010827 Surface antigen variable number GO:0019867 AY555_RS07800 03e00d61e6bfc2a4ee1165c7b820e553 776 Pfam PF07244 Surface antigen variable number repeat 297 354 6.2E-8 T 14-09-2016 IPR010827 Surface antigen variable number GO:0019867 AY555_RS07800 03e00d61e6bfc2a4ee1165c7b820e553 776 Pfam PF07244 Surface antigen variable number repeat 185 272 7.8E-16 T 14-09-2016 IPR010827 Surface antigen variable number GO:0019867 AY555_RS09325 68cac461602fcf86659ce041e14bc144 90 PANTHER PTHR33175 1 89 5.5E-44 T 14-09-2016 AY555_RS09325 68cac461602fcf86659ce041e14bc144 90 Gene3D G3DSA:4.10.520.10 1 89 4.0E-38 T 14-09-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AY555_RS09325 68cac461602fcf86659ce041e14bc144 90 SMART SM00411 1 90 1.1E-44 T 14-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AY555_RS09325 68cac461602fcf86659ce041e14bc144 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 14-09-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AY555_RS09325 68cac461602fcf86659ce041e14bc144 90 Pfam PF00216 Bacterial DNA-binding protein 1 89 1.7E-36 T 14-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AY555_RS09325 68cac461602fcf86659ce041e14bc144 90 SUPERFAMILY SSF47729 1 89 1.02E-33 T 14-09-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AY555_RS09325 68cac461602fcf86659ce041e14bc144 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.2E-18 T 14-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AY555_RS09325 68cac461602fcf86659ce041e14bc144 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.2E-18 T 14-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AY555_RS09325 68cac461602fcf86659ce041e14bc144 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.2E-18 T 14-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AY555_RS03855 c6ec9f772aa022bb398ea8ad4849c0ec 115 PANTHER PTHR30041 1 112 6.9E-36 T 14-09-2016 AY555_RS03855 c6ec9f772aa022bb398ea8ad4849c0ec 115 PANTHER PTHR30041:SF4 1 112 6.9E-36 T 14-09-2016 AY555_RS03855 c6ec9f772aa022bb398ea8ad4849c0ec 115 Gene3D G3DSA:3.40.30.10 1 113 1.7E-38 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS03855 c6ec9f772aa022bb398ea8ad4849c0ec 115 SUPERFAMILY SSF52833 3 113 2.33E-29 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS03855 c6ec9f772aa022bb398ea8ad4849c0ec 115 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 113 7.3E-36 T 14-09-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 AY555_RS03855 c6ec9f772aa022bb398ea8ad4849c0ec 115 Pfam PF03960 ArsC family 59 111 1.7E-11 T 14-09-2016 IPR006660 Arsenate reductase-like AY555_RS09570 95d10ebc6934e372152c699d5838d0ac 142 Pfam PF01152 Bacterial-like globin 25 112 1.0E-5 T 14-09-2016 IPR001486 Truncated hemoglobin GO:0019825 AY555_RS09570 95d10ebc6934e372152c699d5838d0ac 142 SUPERFAMILY SSF46458 20 130 2.4E-28 T 14-09-2016 IPR009050 Globin-like AY555_RS09570 95d10ebc6934e372152c699d5838d0ac 142 Gene3D G3DSA:1.10.490.10 23 130 2.0E-22 T 14-09-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 AY555_RS08030 472a667633b3ca47ff409a1a96249fa1 328 PANTHER PTHR30329 104 324 3.0E-84 T 14-09-2016 AY555_RS08030 472a667633b3ca47ff409a1a96249fa1 328 Gene3D G3DSA:3.30.1330.60 195 299 1.3E-14 T 14-09-2016 IPR006665 OmpA-like domain AY555_RS08030 472a667633b3ca47ff409a1a96249fa1 328 PANTHER PTHR30329:SF2 104 324 3.0E-84 T 14-09-2016 AY555_RS08030 472a667633b3ca47ff409a1a96249fa1 328 SUPERFAMILY SSF103088 186 299 3.27E-17 T 14-09-2016 IPR006665 OmpA-like domain AY555_RS08030 472a667633b3ca47ff409a1a96249fa1 328 PANTHER PTHR30329 2 78 3.0E-84 T 14-09-2016 AY555_RS08030 472a667633b3ca47ff409a1a96249fa1 328 PANTHER PTHR30329:SF2 2 78 3.0E-84 T 14-09-2016 AY555_RS08030 472a667633b3ca47ff409a1a96249fa1 328 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 15 64 3.8E-18 T 14-09-2016 IPR025713 Motility protein B, N-terminal domain AY555_RS08030 472a667633b3ca47ff409a1a96249fa1 328 Pfam PF00691 OmpA family 196 292 2.1E-11 T 14-09-2016 IPR006665 OmpA-like domain AY555_RS04735 88d5a64dc3ced8d59330a17a9f12e0e5 133 Gene3D G3DSA:2.170.130.10 28 123 6.8E-21 T 14-09-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AY555_RS04735 88d5a64dc3ced8d59330a17a9f12e0e5 133 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 120 6.6E-14 T 14-09-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AY555_RS04735 88d5a64dc3ced8d59330a17a9f12e0e5 133 PANTHER PTHR32552 14 132 8.2E-21 T 14-09-2016 AY555_RS04735 88d5a64dc3ced8d59330a17a9f12e0e5 133 SUPERFAMILY SSF56935 29 117 7.78E-21 T 14-09-2016 AY555_RS04810 5618b5122aecba585dbdffb82b6cd0e9 220 SUPERFAMILY SSF51569 1 216 1.67E-73 T 14-09-2016 AY555_RS04810 5618b5122aecba585dbdffb82b6cd0e9 220 ProSitePatterns PS00958 Transaldolase active site. 80 97 - T 14-09-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 AY555_RS04810 5618b5122aecba585dbdffb82b6cd0e9 220 Hamap MF_00494 Probable transaldolase [tal]. 1 215 43.846 T 14-09-2016 IPR022999 Transaldolase type 3B, putative GO:0004801 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 AY555_RS04810 5618b5122aecba585dbdffb82b6cd0e9 220 Pfam PF00923 Transaldolase 3 203 3.0E-53 T 14-09-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 AY555_RS04810 5618b5122aecba585dbdffb82b6cd0e9 220 PANTHER PTHR10683 1 212 6.4E-70 T 14-09-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 AY555_RS04810 5618b5122aecba585dbdffb82b6cd0e9 220 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 212 3.1E-89 T 14-09-2016 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 AY555_RS04810 5618b5122aecba585dbdffb82b6cd0e9 220 Gene3D G3DSA:3.20.20.70 1 216 5.6E-69 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS04810 5618b5122aecba585dbdffb82b6cd0e9 220 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 14-09-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 AY555_RS08805 1feb8068ce6a13323bb205b5172e9cdf 295 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 14-09-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AY555_RS08805 1feb8068ce6a13323bb205b5172e9cdf 295 SMART SM01130 1 289 1.5E-139 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AY555_RS08805 1feb8068ce6a13323bb205b5172e9cdf 295 PANTHER PTHR12128 1 295 6.2E-125 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AY555_RS08805 1feb8068ce6a13323bb205b5172e9cdf 295 PIRSF PIRSF001365 1 295 3.8E-89 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AY555_RS08805 1feb8068ce6a13323bb205b5172e9cdf 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 5.7E-29 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AY555_RS08805 1feb8068ce6a13323bb205b5172e9cdf 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 5.7E-29 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AY555_RS08805 1feb8068ce6a13323bb205b5172e9cdf 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 5.7E-29 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AY555_RS08805 1feb8068ce6a13323bb205b5172e9cdf 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 5.7E-29 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AY555_RS08805 1feb8068ce6a13323bb205b5172e9cdf 295 Gene3D G3DSA:3.20.20.70 1 292 1.2E-116 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS08805 1feb8068ce6a13323bb205b5172e9cdf 295 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 287 62.395 T 14-09-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AY555_RS08805 1feb8068ce6a13323bb205b5172e9cdf 295 SUPERFAMILY SSF51569 2 289 6.07E-103 T 14-09-2016 AY555_RS08805 1feb8068ce6a13323bb205b5172e9cdf 295 Pfam PF00701 Dihydrodipicolinate synthetase family 2 286 1.1E-90 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AY555_RS08805 1feb8068ce6a13323bb205b5172e9cdf 295 PANTHER PTHR12128:SF34 1 295 6.2E-125 T 14-09-2016 AY555_RS08805 1feb8068ce6a13323bb205b5172e9cdf 295 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 5 286 5.4E-100 T 14-09-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AY555_RS01080 a84c5da2c0ffe8170c0593a70b86a84c 288 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 6 281 3.1E-76 T 14-09-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 AY555_RS01080 a84c5da2c0ffe8170c0593a70b86a84c 288 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 2 283 16.556 T 14-09-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 AY555_RS01080 a84c5da2c0ffe8170c0593a70b86a84c 288 PANTHER PTHR11048 6 284 2.7E-65 T 14-09-2016 AY555_RS01080 a84c5da2c0ffe8170c0593a70b86a84c 288 Pfam PF01040 UbiA prenyltransferase family 20 268 5.5E-48 T 14-09-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 AY555_RS01080 a84c5da2c0ffe8170c0593a70b86a84c 288 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 56 78 - T 14-09-2016 IPR030470 UbiA prenyltransferase conserved site AY555_RS03965 f11dfa245057d746bdacf5896d3bb515 145 Pfam PF01475 Ferric uptake regulator family 18 136 1.1E-32 T 14-09-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AY555_RS03965 f11dfa245057d746bdacf5896d3bb515 145 SUPERFAMILY SSF46785 10 138 1.29E-31 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS03965 f11dfa245057d746bdacf5896d3bb515 145 PANTHER PTHR33202 8 138 5.1E-28 T 14-09-2016 AY555_RS03965 f11dfa245057d746bdacf5896d3bb515 145 Gene3D G3DSA:1.10.10.10 9 87 4.3E-23 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS07855 bf9496bd03723124279a953a0f6a25ea 67 Pfam PF01165 Ribosomal protein S21 2 55 8.2E-18 T 14-09-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 AY555_RS07855 bf9496bd03723124279a953a0f6a25ea 67 PANTHER PTHR21109:SF3 2 67 7.2E-27 T 14-09-2016 AY555_RS07855 bf9496bd03723124279a953a0f6a25ea 67 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 1 56 3.1E-17 T 14-09-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 AY555_RS07855 bf9496bd03723124279a953a0f6a25ea 67 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 13 32 0.001 T 14-09-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 AY555_RS07855 bf9496bd03723124279a953a0f6a25ea 67 PANTHER PTHR21109 2 67 7.2E-27 T 14-09-2016 AY555_RS07855 bf9496bd03723124279a953a0f6a25ea 67 ProSitePatterns PS01181 Ribosomal protein S21 signature. 11 23 - T 14-09-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS01820 d08121e418eeaad1782bd19155670606 240 Pfam PF04028 Domain of unknown function (DUF374) 66 133 6.1E-25 T 14-09-2016 IPR007172 Domain of unknown function DUF374 AY555_RS01820 d08121e418eeaad1782bd19155670606 240 ProDom PD032436 LIPOPROTEIN UNCHARACTERIZED PROBABLE CJ0457C SIMILAR TRANSFERASE BACTERIA PRECURSOR SIGNAL CC0304 17 133 1.0E-14 T 14-09-2016 IPR007172 Domain of unknown function DUF374 AY555_RS09450 f901cef0d352ef414ccc8aaf5d72f0de 127 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 81 94 - T 14-09-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 AY555_RS09450 f901cef0d352ef414ccc8aaf5d72f0de 127 SUPERFAMILY SSF81343 5 121 9.37E-34 T 14-09-2016 AY555_RS09450 f901cef0d352ef414ccc8aaf5d72f0de 127 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 3 119 2.1E-31 T 14-09-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 AY555_RS09450 f901cef0d352ef414ccc8aaf5d72f0de 127 PANTHER PTHR10978 6 121 1.7E-33 T 14-09-2016 AY555_RS09450 f901cef0d352ef414ccc8aaf5d72f0de 127 Gene3D G3DSA:1.20.1300.10 3 122 1.3E-41 T 14-09-2016 AY555_RS09450 f901cef0d352ef414ccc8aaf5d72f0de 127 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 6 30 - T 14-09-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 AY555_RS09450 f901cef0d352ef414ccc8aaf5d72f0de 127 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 5 121 1.1E-38 T 14-09-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 AY555_RS09450 f901cef0d352ef414ccc8aaf5d72f0de 127 PIRSF PIRSF000178 1 124 2.0E-36 T 14-09-2016 AY555_RS09140 8199daf445430986357c31029ec586af 429 SUPERFAMILY SSF51556 60 371 2.58E-89 T 14-09-2016 IPR032466 Metal-dependent hydrolase AY555_RS09140 8199daf445430986357c31029ec586af 429 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 43 425 3.0E-94 T 14-09-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 AY555_RS09140 8199daf445430986357c31029ec586af 429 Gene3D G3DSA:3.20.20.140 61 380 2.3E-86 T 14-09-2016 AY555_RS09140 8199daf445430986357c31029ec586af 429 PANTHER PTHR11647 8 428 1.1E-117 T 14-09-2016 AY555_RS09140 8199daf445430986357c31029ec586af 429 Pfam PF01979 Amidohydrolase family 57 423 1.6E-23 T 14-09-2016 IPR006680 Amidohydrolase-related GO:0016787 AY555_RS09140 8199daf445430986357c31029ec586af 429 Gene3D G3DSA:2.30.40.10 381 425 2.8E-10 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AY555_RS09140 8199daf445430986357c31029ec586af 429 Gene3D G3DSA:2.30.40.10 2 60 2.8E-10 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AY555_RS09140 8199daf445430986357c31029ec586af 429 SUPERFAMILY SSF51338 2 59 1.11E-20 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AY555_RS09140 8199daf445430986357c31029ec586af 429 SUPERFAMILY SSF51338 370 428 1.11E-20 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AY555_RS09140 8199daf445430986357c31029ec586af 429 PANTHER PTHR11647:SF70 8 428 1.1E-117 T 14-09-2016 AY555_RS09140 8199daf445430986357c31029ec586af 429 Hamap MF_00220_B Dihydroorotase [pyrC]. 3 428 33.39 T 14-09-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 AY555_RS04855 ac4848a95118f248b78e3b41c7ee3764 169 Pfam PF10722 Putative bacterial sensory transduction regulator 19 145 4.5E-25 T 14-09-2016 IPR019660 Putative sensory transduction regulator YbjN AY555_RS09760 943fddda23f354fddde2c09de18bdb85 204 SMART SM01390 3 92 9.6E-42 T 14-09-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 AY555_RS09760 943fddda23f354fddde2c09de18bdb85 204 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 6 204 5.8E-76 T 14-09-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AY555_RS09760 943fddda23f354fddde2c09de18bdb85 204 SMART SM00363 93 157 9.3E-16 T 14-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 AY555_RS09760 943fddda23f354fddde2c09de18bdb85 204 PANTHER PTHR11831:SF4 1 204 5.5E-70 T 14-09-2016 AY555_RS09760 943fddda23f354fddde2c09de18bdb85 204 SUPERFAMILY SSF55174 7 204 4.58E-62 T 14-09-2016 AY555_RS09760 943fddda23f354fddde2c09de18bdb85 204 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 5 92 2.7E-23 T 14-09-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 AY555_RS09760 943fddda23f354fddde2c09de18bdb85 204 Pfam PF01479 S4 domain 93 140 8.3E-19 T 14-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 AY555_RS09760 943fddda23f354fddde2c09de18bdb85 204 PANTHER PTHR11831 1 204 5.5E-70 T 14-09-2016 IPR022801 Ribosomal protein S4/S9 AY555_RS09760 943fddda23f354fddde2c09de18bdb85 204 Gene3D G3DSA:1.10.1050.10 1 95 5.7E-34 T 14-09-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 AY555_RS09760 943fddda23f354fddde2c09de18bdb85 204 ProSitePatterns PS00632 Ribosomal protein S4 signature. 91 115 - T 14-09-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 AY555_RS09760 943fddda23f354fddde2c09de18bdb85 204 Gene3D G3DSA:3.10.290.10 96 193 2.0E-32 T 14-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 AY555_RS09760 943fddda23f354fddde2c09de18bdb85 204 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 204 32.827 T 14-09-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AY555_RS04590 ec010f7ea81aa23a98f2ca9946365f2a 274 SUPERFAMILY SSF81345 3 255 3.27E-29 T 14-09-2016 IPR029022 ABC transporter, BtuC-like AY555_RS04590 ec010f7ea81aa23a98f2ca9946365f2a 274 PANTHER PTHR30477:SF0 4 255 3.2E-66 T 14-09-2016 AY555_RS04590 ec010f7ea81aa23a98f2ca9946365f2a 274 Gene3D G3DSA:1.10.3470.10 40 245 2.8E-4 T 14-09-2016 IPR029022 ABC transporter, BtuC-like AY555_RS04590 ec010f7ea81aa23a98f2ca9946365f2a 274 PANTHER PTHR30477 4 255 3.2E-66 T 14-09-2016 AY555_RS04590 ec010f7ea81aa23a98f2ca9946365f2a 274 Pfam PF00950 ABC 3 transport family 2 259 3.9E-64 T 14-09-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 AY555_RS06880 81e269fd3229908d2d9e4572a2f75a1e 458 Pfam PF01551 Peptidase family M23 316 413 2.2E-33 T 14-09-2016 IPR016047 Peptidase M23 AY555_RS06880 81e269fd3229908d2d9e4572a2f75a1e 458 SUPERFAMILY SSF51261 172 414 1.73E-66 T 14-09-2016 IPR011055 Duplicated hybrid motif AY555_RS06880 81e269fd3229908d2d9e4572a2f75a1e 458 Gene3D G3DSA:2.70.70.10 270 415 2.0E-50 T 14-09-2016 AY555_RS06880 81e269fd3229908d2d9e4572a2f75a1e 458 PANTHER PTHR21666:SF207 201 428 6.3E-48 T 14-09-2016 AY555_RS06880 81e269fd3229908d2d9e4572a2f75a1e 458 PANTHER PTHR21666 201 428 6.3E-48 T 14-09-2016 AY555_RS07995 67e7520e668a8a2aff2fdd964ec0f159 143 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 103 1.0E-19 T 14-09-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AY555_RS07995 67e7520e668a8a2aff2fdd964ec0f159 143 Gene3D G3DSA:3.90.470.20 1 133 2.3E-32 T 14-09-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AY555_RS07995 67e7520e668a8a2aff2fdd964ec0f159 143 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 102 5.1E-18 T 14-09-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AY555_RS07995 67e7520e668a8a2aff2fdd964ec0f159 143 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 2 134 6.8E-21 T 14-09-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AY555_RS07995 67e7520e668a8a2aff2fdd964ec0f159 143 SUPERFAMILY SSF56214 1 133 6.54E-26 T 14-09-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AY555_RS07995 67e7520e668a8a2aff2fdd964ec0f159 143 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 134 24.105 T 14-09-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AY555_RS07995 67e7520e668a8a2aff2fdd964ec0f159 143 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 134 4.5E-25 T 14-09-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AY555_RS00970 fd41703bb977a6ce8ae92c5e05e8e8f9 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.135 T 14-09-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 AY555_RS00970 fd41703bb977a6ce8ae92c5e05e8e8f9 102 SUPERFAMILY SSF54999 6 102 1.15E-39 T 14-09-2016 IPR027486 Ribosomal protein S10 domain AY555_RS00970 fd41703bb977a6ce8ae92c5e05e8e8f9 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 14-09-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00970 fd41703bb977a6ce8ae92c5e05e8e8f9 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 7.1E-18 T 14-09-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 AY555_RS00970 fd41703bb977a6ce8ae92c5e05e8e8f9 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 7.1E-18 T 14-09-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 AY555_RS00970 fd41703bb977a6ce8ae92c5e05e8e8f9 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 7.1E-18 T 14-09-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 AY555_RS00970 fd41703bb977a6ce8ae92c5e05e8e8f9 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 7.0E-47 T 14-09-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 AY555_RS00970 fd41703bb977a6ce8ae92c5e05e8e8f9 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 8.2E-37 T 14-09-2016 IPR027486 Ribosomal protein S10 domain AY555_RS00970 fd41703bb977a6ce8ae92c5e05e8e8f9 102 PANTHER PTHR11700 1 102 7.5E-54 T 14-09-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 AY555_RS00970 fd41703bb977a6ce8ae92c5e05e8e8f9 102 Gene3D G3DSA:3.30.70.600 4 102 1.2E-44 T 14-09-2016 IPR027486 Ribosomal protein S10 domain AY555_RS00970 fd41703bb977a6ce8ae92c5e05e8e8f9 102 SMART SM01403 7 101 5.1E-59 T 14-09-2016 IPR027486 Ribosomal protein S10 domain AY555_RS00640 8c1a4ff26b6bbe48d41cfd73678cdbe8 233 PANTHER PTHR30471 5 233 4.3E-70 T 14-09-2016 AY555_RS00640 8c1a4ff26b6bbe48d41cfd73678cdbe8 233 TIGRFAM TIGR00608 radc: DNA repair protein RadC 20 233 9.0E-63 T 14-09-2016 IPR001405 RadC protein AY555_RS00640 8c1a4ff26b6bbe48d41cfd73678cdbe8 233 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 182 187 - T 14-09-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site AY555_RS00640 8c1a4ff26b6bbe48d41cfd73678cdbe8 233 PANTHER PTHR30471:SF3 5 233 4.3E-70 T 14-09-2016 AY555_RS00640 8c1a4ff26b6bbe48d41cfd73678cdbe8 233 Gene3D G3DSA:3.40.140.10 109 233 1.5E-48 T 14-09-2016 AY555_RS00640 8c1a4ff26b6bbe48d41cfd73678cdbe8 233 SUPERFAMILY SSF102712 123 199 6.02E-7 T 14-09-2016 AY555_RS00640 8c1a4ff26b6bbe48d41cfd73678cdbe8 233 Pfam PF04002 RadC-like JAB domain 113 231 1.4E-44 T 14-09-2016 IPR025657 RadC-like JAB domain AY555_RS00320 33fc6f3be0484f15d24fed0147742122 562 Gene3D G3DSA:1.10.287.950 328 525 1.8E-46 T 14-09-2016 AY555_RS00320 33fc6f3be0484f15d24fed0147742122 562 PANTHER PTHR32089:SF40 279 558 5.4E-134 T 14-09-2016 AY555_RS00320 33fc6f3be0484f15d24fed0147742122 562 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 263 558 0.003 T 14-09-2016 AY555_RS00320 33fc6f3be0484f15d24fed0147742122 562 SMART SM00304 211 264 5.8E-6 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AY555_RS00320 33fc6f3be0484f15d24fed0147742122 562 PANTHER PTHR32089:SF40 170 246 5.4E-134 T 14-09-2016 AY555_RS00320 33fc6f3be0484f15d24fed0147742122 562 SMART SM00283 301 555 5.5E-46 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AY555_RS00320 33fc6f3be0484f15d24fed0147742122 562 Pfam PF00672 HAMP domain 192 258 4.4E-11 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AY555_RS00320 33fc6f3be0484f15d24fed0147742122 562 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 377 554 1.4E-35 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AY555_RS00320 33fc6f3be0484f15d24fed0147742122 562 SUPERFAMILY SSF58104 307 554 1.7E-61 T 14-09-2016 AY555_RS00320 33fc6f3be0484f15d24fed0147742122 562 SUPERFAMILY SSF58104 239 266 1.7E-61 T 14-09-2016 AY555_RS00320 33fc6f3be0484f15d24fed0147742122 562 PANTHER PTHR32089 170 246 5.4E-134 T 14-09-2016 AY555_RS00320 33fc6f3be0484f15d24fed0147742122 562 PANTHER PTHR32089 279 558 5.4E-134 T 14-09-2016 AY555_RS00320 33fc6f3be0484f15d24fed0147742122 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 428 457 3.5E-22 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AY555_RS00320 33fc6f3be0484f15d24fed0147742122 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 399 426 3.5E-22 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AY555_RS00320 33fc6f3be0484f15d24fed0147742122 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 476 505 3.5E-22 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AY555_RS00320 33fc6f3be0484f15d24fed0147742122 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 318 347 3.5E-22 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AY555_RS00320 33fc6f3be0484f15d24fed0147742122 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 6 31 3.5E-22 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AY555_RS05765 cde120225932ce847d5ae699ea313fca 318 Pfam PF03741 Integral membrane protein TerC family 69 271 3.8E-57 T 14-09-2016 IPR005496 Integral membrane protein TerC GO:0016021 AY555_RS05765 cde120225932ce847d5ae699ea313fca 318 PANTHER PTHR30238:SF0 2 314 7.9E-149 T 14-09-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 AY555_RS05765 cde120225932ce847d5ae699ea313fca 318 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 5 302 1.1E-121 T 14-09-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 AY555_RS05765 cde120225932ce847d5ae699ea313fca 318 PANTHER PTHR30238 2 314 7.9E-149 T 14-09-2016 AY555_RS03415 028cad4ba24fd0fa6328f1619f8e2b2e 104 PANTHER PTHR12599 2 104 1.1E-46 T 14-09-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AY555_RS03415 028cad4ba24fd0fa6328f1619f8e2b2e 104 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 2 95 23.555 T 14-09-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AY555_RS03415 028cad4ba24fd0fa6328f1619f8e2b2e 104 Gene3D G3DSA:3.30.1360.20 3 95 2.7E-33 T 14-09-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AY555_RS03415 028cad4ba24fd0fa6328f1619f8e2b2e 104 SUPERFAMILY SSF55248 2 95 2.62E-32 T 14-09-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AY555_RS03415 028cad4ba24fd0fa6328f1619f8e2b2e 104 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 5 94 3.7E-29 T 14-09-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AY555_RS03415 028cad4ba24fd0fa6328f1619f8e2b2e 104 PANTHER PTHR12599:SF7 2 104 1.1E-46 T 14-09-2016 AY555_RS10340 1af9d01140d0394bc5f81d87fc008b2f 92 Gene3D G3DSA:1.10.287.500 39 81 1.2E-7 T 14-09-2016 AY555_RS10340 1af9d01140d0394bc5f81d87fc008b2f 92 SUPERFAMILY SSF75708 12 85 7.32E-15 T 14-09-2016 AY555_RS05055 c7c82644e9db2787493e7ce188c759a0 154 PANTHER PTHR34354 22 147 4.9E-51 T 14-09-2016 AY555_RS05055 c7c82644e9db2787493e7ce188c759a0 154 SUPERFAMILY SSF55620 25 136 4.52E-24 T 14-09-2016 AY555_RS05055 c7c82644e9db2787493e7ce188c759a0 154 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 154 67.878 T 14-09-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 AY555_RS05055 c7c82644e9db2787493e7ce188c759a0 154 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 24 132 2.3E-42 T 14-09-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 AY555_RS05055 c7c82644e9db2787493e7ce188c759a0 154 Gene3D G3DSA:3.30.1130.10 14 137 9.4E-44 T 14-09-2016 AY555_RS05055 c7c82644e9db2787493e7ce188c759a0 154 Pfam PF14489 QueF-like protein 58 134 3.9E-31 T 14-09-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 AY555_RS05055 c7c82644e9db2787493e7ce188c759a0 154 PANTHER PTHR34354:SF1 22 147 4.9E-51 T 14-09-2016 AY555_RS09715 5716abdece67d2b27b36a347f735f0e9 535 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 220 406 6.9E-40 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AY555_RS09715 5716abdece67d2b27b36a347f735f0e9 535 SMART SM00283 155 417 2.7E-42 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AY555_RS09715 5716abdece67d2b27b36a347f735f0e9 535 SUPERFAMILY SSF58104 164 410 3.27E-57 T 14-09-2016 AY555_RS09715 5716abdece67d2b27b36a347f735f0e9 535 Gene3D G3DSA:1.10.287.950 176 390 3.1E-48 T 14-09-2016 AY555_RS09715 5716abdece67d2b27b36a347f735f0e9 535 Pfam PF13682 Chemoreceptor zinc-binding domain 432 497 4.3E-12 T 14-09-2016 IPR025991 Chemoreceptor zinc-binding domain UniPathway: UPA00599 AY555_RS09715 5716abdece67d2b27b36a347f735f0e9 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 172 201 3.9E-5 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AY555_RS09715 5716abdece67d2b27b36a347f735f0e9 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 285 314 3.9E-5 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AY555_RS09715 5716abdece67d2b27b36a347f735f0e9 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 333 362 3.9E-5 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AY555_RS09715 5716abdece67d2b27b36a347f735f0e9 535 PANTHER PTHR32089 128 140 3.4E-57 T 14-09-2016 AY555_RS09715 5716abdece67d2b27b36a347f735f0e9 535 PANTHER PTHR32089 160 414 3.4E-57 T 14-09-2016 AY555_RS09810 98eb39d42d6ba8156bfe97122d733d18 214 Gene3D G3DSA:1.10.3720.10 12 208 4.2E-37 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS09810 98eb39d42d6ba8156bfe97122d733d18 214 SUPERFAMILY SSF161098 12 198 5.63E-33 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS09810 98eb39d42d6ba8156bfe97122d733d18 214 PANTHER PTHR30614 1 213 7.6E-56 T 14-09-2016 AY555_RS09810 98eb39d42d6ba8156bfe97122d733d18 214 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 25 208 8.3E-17 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS09810 98eb39d42d6ba8156bfe97122d733d18 214 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 104 4.7E-20 T 14-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AY555_RS07735 6a196641c6d936cb4a51527cd38ca814 415 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 6 415 7.2E-147 T 14-09-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 AY555_RS07735 6a196641c6d936cb4a51527cd38ca814 415 PANTHER PTHR30489 1 415 4.5E-79 T 14-09-2016 AY555_RS07735 6a196641c6d936cb4a51527cd38ca814 415 Pfam PF12704 MacB-like periplasmic core domain 30 241 2.0E-18 T 14-09-2016 IPR025857 MacB-like periplasmic core domain AY555_RS07735 6a196641c6d936cb4a51527cd38ca814 415 Pfam PF02687 FtsX-like permease family 275 408 5.8E-17 T 14-09-2016 IPR003838 ABC transporter permease protein domain GO:0016020 AY555_RS07735 6a196641c6d936cb4a51527cd38ca814 415 PANTHER PTHR30489:SF8 1 415 4.5E-79 T 14-09-2016 AY555_RS00575 bb347c16d56610f8d100e67faf0b51b8 327 PANTHER PTHR21535:SF37 21 327 1.2E-109 T 14-09-2016 AY555_RS00575 bb347c16d56610f8d100e67faf0b51b8 327 SUPERFAMILY SSF144083 262 325 3.27E-21 T 14-09-2016 AY555_RS00575 bb347c16d56610f8d100e67faf0b51b8 327 Gene3D G3DSA:3.30.460.20 24 125 4.8E-5 T 14-09-2016 AY555_RS00575 bb347c16d56610f8d100e67faf0b51b8 327 Gene3D G3DSA:1.20.58.340 251 327 5.9E-29 T 14-09-2016 AY555_RS00575 bb347c16d56610f8d100e67faf0b51b8 327 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 26 327 1.7E-63 T 14-09-2016 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 AY555_RS00575 bb347c16d56610f8d100e67faf0b51b8 327 PANTHER PTHR21535 21 327 1.2E-109 T 14-09-2016 AY555_RS00575 bb347c16d56610f8d100e67faf0b51b8 327 SUPERFAMILY SSF143865 24 266 1.96E-37 T 14-09-2016 AY555_RS00575 bb347c16d56610f8d100e67faf0b51b8 327 Pfam PF01544 CorA-like Mg2+ transporter protein 26 323 5.3E-55 T 14-09-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 AY555_RS07715 503eacde6bc2cbb945c108e8b39b5dff 143 PANTHER PTHR37164 1 136 2.1E-22 T 14-09-2016 AY555_RS07715 503eacde6bc2cbb945c108e8b39b5dff 143 Pfam PF01814 Hemerythrin HHE cation binding domain 5 120 2.3E-15 T 14-09-2016 IPR012312 Haemerythrin-like AY555_RS07715 503eacde6bc2cbb945c108e8b39b5dff 143 ProSitePatterns PS00550 Hemerythrin family signature. 49 72 - T 14-09-2016 IPR016131 Haemerythrin, iron-binding site GO:0046872 AY555_RS07715 503eacde6bc2cbb945c108e8b39b5dff 143 SUPERFAMILY SSF47188 2 119 1.7E-25 T 14-09-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AY555_RS07715 503eacde6bc2cbb945c108e8b39b5dff 143 Gene3D G3DSA:1.20.120.50 1 119 5.0E-29 T 14-09-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AY555_RS07715 503eacde6bc2cbb945c108e8b39b5dff 143 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 2 120 1.4E-31 T 14-09-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AY555_RS02710 0c46977760eb0dd337fc70f885a9ede1 270 Gene3D G3DSA:3.90.1340.10 126 191 1.3E-23 T 14-09-2016 IPR011083 Phage tail collar domain AY555_RS02710 0c46977760eb0dd337fc70f885a9ede1 270 Pfam PF07484 Phage Tail Collar Domain 129 186 6.1E-21 T 14-09-2016 IPR011083 Phage tail collar domain AY555_RS02710 0c46977760eb0dd337fc70f885a9ede1 270 SUPERFAMILY SSF88874 126 269 9.16E-42 T 14-09-2016 AY555_RS00800 39a1012df88ce46247e0a6819cad4a1f 186 PANTHER PTHR36917:SF1 2 175 4.3E-39 T 14-09-2016 AY555_RS00800 39a1012df88ce46247e0a6819cad4a1f 186 Pfam PF04279 Intracellular septation protein A 5 176 1.0E-50 T 14-09-2016 IPR006008 Intracellular septation protein A GO:0016021 AY555_RS00800 39a1012df88ce46247e0a6819cad4a1f 186 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 5 179 16.396 T 14-09-2016 IPR006008 Intracellular septation protein A GO:0016021 AY555_RS00800 39a1012df88ce46247e0a6819cad4a1f 186 PANTHER PTHR36917 2 175 4.3E-39 T 14-09-2016 AY555_RS06850 1480ac31e3d3c47061fb809d3d4377d3 417 SUPERFAMILY SSF55681 5 317 4.4E-93 T 14-09-2016 AY555_RS06850 1480ac31e3d3c47061fb809d3d4377d3 417 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 5 401 1.2E-135 T 14-09-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 AY555_RS06850 1480ac31e3d3c47061fb809d3d4377d3 417 Gene3D G3DSA:3.30.930.10 3 183 4.0E-85 T 14-09-2016 AY555_RS06850 1480ac31e3d3c47061fb809d3d4377d3 417 Gene3D G3DSA:3.30.930.10 219 315 4.0E-85 T 14-09-2016 AY555_RS06850 1480ac31e3d3c47061fb809d3d4377d3 417 Pfam PF03129 Anticodon binding domain 325 409 5.2E-11 T 14-09-2016 IPR004154 Anticodon-binding AY555_RS06850 1480ac31e3d3c47061fb809d3d4377d3 417 Gene3D G3DSA:3.40.50.800 324 410 8.5E-20 T 14-09-2016 IPR004154 Anticodon-binding AY555_RS06850 1480ac31e3d3c47061fb809d3d4377d3 417 Pfam PF13393 Histidyl-tRNA synthetase 9 310 1.7E-40 T 14-09-2016 AY555_RS06850 1480ac31e3d3c47061fb809d3d4377d3 417 SUPERFAMILY SSF52954 324 410 2.45E-16 T 14-09-2016 IPR004154 Anticodon-binding AY555_RS06850 1480ac31e3d3c47061fb809d3d4377d3 417 PIRSF PIRSF001549 1 412 1.7E-111 T 14-09-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 AY555_RS06850 1480ac31e3d3c47061fb809d3d4377d3 417 PANTHER PTHR11476 1 417 4.0E-180 T 14-09-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 AY555_RS06850 1480ac31e3d3c47061fb809d3d4377d3 417 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 2 411 30.764 T 14-09-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 AY555_RS06850 1480ac31e3d3c47061fb809d3d4377d3 417 PANTHER PTHR11476:SF9 1 417 4.0E-180 T 14-09-2016 AY555_RS01470 825ca1afafc213278bfd09dec5d15c60 236 PANTHER PTHR30485 10 211 6.3E-17 T 14-09-2016 AY555_RS01470 825ca1afafc213278bfd09dec5d15c60 236 SUPERFAMILY SSF81342 7 204 1.22E-39 T 14-09-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 AY555_RS01470 825ca1afafc213278bfd09dec5d15c60 236 Pfam PF01292 Prokaryotic cytochrome b561 10 196 6.7E-29 T 14-09-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AY555_RS01470 825ca1afafc213278bfd09dec5d15c60 236 Gene3D G3DSA:1.20.950.20 7 199 3.0E-17 T 14-09-2016 AY555_RS05485 a3dfa3c865816135f1565786188ea26e 246 PANTHER PTHR10108:SF779 2 135 2.4E-15 T 14-09-2016 AY555_RS05485 a3dfa3c865816135f1565786188ea26e 246 Pfam PF13489 Methyltransferase domain 37 190 4.2E-18 T 14-09-2016 AY555_RS05485 a3dfa3c865816135f1565786188ea26e 246 PANTHER PTHR10108 2 135 2.4E-15 T 14-09-2016 AY555_RS05485 a3dfa3c865816135f1565786188ea26e 246 Gene3D G3DSA:3.40.50.150 28 239 4.8E-32 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS05485 a3dfa3c865816135f1565786188ea26e 246 SUPERFAMILY SSF53335 31 239 1.0E-31 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS08405 178bff3b6b08b190ca09582bc9b55a3d 356 Pfam PF13481 AAA domain 5 188 1.6E-29 T 14-09-2016 AY555_RS08405 178bff3b6b08b190ca09582bc9b55a3d 356 SUPERFAMILY SSF52540 10 207 4.46E-15 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08405 178bff3b6b08b190ca09582bc9b55a3d 356 Gene3D G3DSA:3.40.50.300 8 207 2.6E-25 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS05350 465d6ad17f7afd5a3599e028b8a3959c 165 PANTHER PTHR33695:SF1 10 165 2.0E-40 T 14-09-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AY555_RS05350 465d6ad17f7afd5a3599e028b8a3959c 165 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 13 165 14.464 T 14-09-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AY555_RS05350 465d6ad17f7afd5a3599e028b8a3959c 165 TIGRFAM TIGR00077 lspA: signal peptidase II 17 163 3.2E-30 T 14-09-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AY555_RS05350 465d6ad17f7afd5a3599e028b8a3959c 165 Pfam PF01252 Signal peptidase (SPase) II 22 161 6.7E-34 T 14-09-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AY555_RS05350 465d6ad17f7afd5a3599e028b8a3959c 165 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 105 120 3.1E-15 T 14-09-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AY555_RS05350 465d6ad17f7afd5a3599e028b8a3959c 165 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 141 157 3.1E-15 T 14-09-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AY555_RS05350 465d6ad17f7afd5a3599e028b8a3959c 165 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 60 68 3.1E-15 T 14-09-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AY555_RS05350 465d6ad17f7afd5a3599e028b8a3959c 165 ProSitePatterns PS00855 Signal peptidases II signature. 108 120 - T 14-09-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AY555_RS05350 465d6ad17f7afd5a3599e028b8a3959c 165 PANTHER PTHR33695 10 165 2.0E-40 T 14-09-2016 AY555_RS04875 01b24a47a09ac095599a7d983e437c9f 364 PANTHER PTHR12049 14 363 7.5E-95 T 14-09-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA AY555_RS04875 01b24a47a09ac095599a7d983e437c9f 364 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 65 296 8.5E-63 T 14-09-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA AY555_RS04875 01b24a47a09ac095599a7d983e437c9f 364 SUPERFAMILY SSF53335 15 362 1.26E-101 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS04875 01b24a47a09ac095599a7d983e437c9f 364 PANTHER PTHR12049:SF7 14 363 7.5E-95 T 14-09-2016 AY555_RS00900 492a10df0a456c5546c2fa453e1f6b76 101 PANTHER PTHR19836 1 101 3.4E-53 T 14-09-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00900 492a10df0a456c5546c2fa453e1f6b76 101 Gene3D G3DSA:4.10.830.10 41 101 2.0E-29 T 14-09-2016 AY555_RS00900 492a10df0a456c5546c2fa453e1f6b76 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 4.6E-25 T 14-09-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00900 492a10df0a456c5546c2fa453e1f6b76 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.108 T 14-09-2016 IPR023036 Ribosomal protein S14, bacterial/plastid AY555_RS00900 492a10df0a456c5546c2fa453e1f6b76 101 SUPERFAMILY SSF57716 2 101 3.18E-36 T 14-09-2016 AY555_RS02820 e3e5904405142c5f75990deb48a210e2 528 Pfam PF03354 Phage Terminase 46 507 2.3E-94 T 14-09-2016 IPR005021 Phage terminase AY555_RS02820 e3e5904405142c5f75990deb48a210e2 528 PANTHER PTHR41287 1 527 2.6E-136 T 14-09-2016 AY555_RS07075 d248ce806851b329c9ff7caa919d8be8 139 Gene3D G3DSA:3.30.428.10 3 132 2.6E-35 T 14-09-2016 IPR011146 HIT-like domain GO:0003824 AY555_RS07075 d248ce806851b329c9ff7caa919d8be8 139 Pfam PF01230 HIT domain 9 98 6.3E-16 T 14-09-2016 IPR001310 Histidine triad (HIT) protein AY555_RS07075 d248ce806851b329c9ff7caa919d8be8 139 PIRSF PIRSF000714 1 138 3.5E-50 T 14-09-2016 IPR026026 Histidine triad hydrolase, Hint-type AY555_RS07075 d248ce806851b329c9ff7caa919d8be8 139 PANTHER PTHR23089:SF13 21 134 3.1E-27 T 14-09-2016 AY555_RS07075 d248ce806851b329c9ff7caa919d8be8 139 SUPERFAMILY SSF54197 2 132 4.95E-34 T 14-09-2016 IPR011146 HIT-like domain GO:0003824 AY555_RS07075 d248ce806851b329c9ff7caa919d8be8 139 PANTHER PTHR23089 21 134 3.1E-27 T 14-09-2016 IPR001310 Histidine triad (HIT) protein AY555_RS08970 e4fa3999b431c43d7fa99a5257d3ee80 470 PANTHER PTHR30023 4 454 1.3E-23 T 14-09-2016 AY555_RS08970 e4fa3999b431c43d7fa99a5257d3ee80 470 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 56 206 2.2E-17 T 14-09-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AY555_RS08970 e4fa3999b431c43d7fa99a5257d3ee80 470 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 225 429 1.3E-15 T 14-09-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AY555_RS08970 e4fa3999b431c43d7fa99a5257d3ee80 470 Gene3D G3DSA:3.40.710.10 225 427 3.2E-25 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AY555_RS08970 e4fa3999b431c43d7fa99a5257d3ee80 470 SUPERFAMILY SSF56601 55 429 3.2E-45 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AY555_RS08970 e4fa3999b431c43d7fa99a5257d3ee80 470 PANTHER PTHR30023:SF0 4 454 1.3E-23 T 14-09-2016 AY555_RS08970 e4fa3999b431c43d7fa99a5257d3ee80 470 Gene3D G3DSA:3.40.710.10 52 94 1.2E-4 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AY555_RS08770 4588a42e856cd07614bdedf0bb44b7ea 151 PANTHER PTHR12901 10 146 3.4E-24 T 14-09-2016 AY555_RS08770 4588a42e856cd07614bdedf0bb44b7ea 151 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 7.8E-22 T 14-09-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain AY555_RS08770 4588a42e856cd07614bdedf0bb44b7ea 151 Gene3D G3DSA:3.30.530.20 4 143 1.7E-33 T 14-09-2016 IPR023393 START-like domain AY555_RS08770 4588a42e856cd07614bdedf0bb44b7ea 151 SUPERFAMILY SSF55961 1 142 8.61E-26 T 14-09-2016 AY555_RS08770 4588a42e856cd07614bdedf0bb44b7ea 151 PANTHER PTHR12901:SF7 10 146 3.4E-24 T 14-09-2016 AY555_RS03050 9391544558bf3c1a2d8c929c6e1b7790 267 SMART SM00382 55 248 2.5E-8 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS03050 9391544558bf3c1a2d8c929c6e1b7790 267 PANTHER PTHR24220 32 264 2.0E-132 T 14-09-2016 AY555_RS03050 9391544558bf3c1a2d8c929c6e1b7790 267 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 241 262 2.2E-6 T 14-09-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AY555_RS03050 9391544558bf3c1a2d8c929c6e1b7790 267 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 31 267 3.1E-111 T 14-09-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 AY555_RS03050 9391544558bf3c1a2d8c929c6e1b7790 267 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AY555_RS03050 9391544558bf3c1a2d8c929c6e1b7790 267 PANTHER PTHR24220:SF497 32 264 2.0E-132 T 14-09-2016 AY555_RS03050 9391544558bf3c1a2d8c929c6e1b7790 267 Gene3D G3DSA:3.40.50.300 24 260 1.7E-69 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS03050 9391544558bf3c1a2d8c929c6e1b7790 267 SUPERFAMILY SSF52540 31 263 4.75E-65 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS03050 9391544558bf3c1a2d8c929c6e1b7790 267 Pfam PF00005 ABC transporter 46 191 5.4E-34 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AY555_RS00145 5d655d4925a3890c7265b4cc7dc69392 248 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 6 130 6.2E-32 T 14-09-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AY555_RS00145 5d655d4925a3890c7265b4cc7dc69392 248 PANTHER PTHR30435:SF18 1 241 3.1E-44 T 14-09-2016 AY555_RS00145 5d655d4925a3890c7265b4cc7dc69392 248 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 14-09-2016 IPR019776 Flagellar basal body rod protein, conserved site AY555_RS00145 5d655d4925a3890c7265b4cc7dc69392 248 Pfam PF00460 Flagella basal body rod protein 6 35 1.4E-9 T 14-09-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AY555_RS00145 5d655d4925a3890c7265b4cc7dc69392 248 SUPERFAMILY SSF117143 83 204 2.48E-15 T 14-09-2016 AY555_RS00145 5d655d4925a3890c7265b4cc7dc69392 248 PANTHER PTHR30435 1 241 3.1E-44 T 14-09-2016 AY555_RS00145 5d655d4925a3890c7265b4cc7dc69392 248 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 172 239 2.1E-12 T 14-09-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AY555_RS00145 5d655d4925a3890c7265b4cc7dc69392 248 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 6 223 2.0E-53 T 14-09-2016 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 AY555_RS05735 0d7b5792329f7b98dfba6e10b6dce4fa 140 SMART SM00562 3 140 1.5E-87 T 14-09-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AY555_RS05735 0d7b5792329f7b98dfba6e10b6dce4fa 140 PANTHER PTHR11349 1 139 2.4E-71 T 14-09-2016 AY555_RS05735 0d7b5792329f7b98dfba6e10b6dce4fa 140 Pfam PF00334 Nucleoside diphosphate kinase 4 138 6.9E-56 T 14-09-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AY555_RS05735 0d7b5792329f7b98dfba6e10b6dce4fa 140 SUPERFAMILY SSF54919 1 139 3.67E-58 T 14-09-2016 AY555_RS05735 0d7b5792329f7b98dfba6e10b6dce4fa 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 2.0E-39 T 14-09-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AY555_RS05735 0d7b5792329f7b98dfba6e10b6dce4fa 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 2.0E-39 T 14-09-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AY555_RS05735 0d7b5792329f7b98dfba6e10b6dce4fa 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 2.0E-39 T 14-09-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AY555_RS05735 0d7b5792329f7b98dfba6e10b6dce4fa 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 2.0E-39 T 14-09-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AY555_RS05735 0d7b5792329f7b98dfba6e10b6dce4fa 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 2.0E-39 T 14-09-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AY555_RS05735 0d7b5792329f7b98dfba6e10b6dce4fa 140 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 14-09-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AY555_RS05735 0d7b5792329f7b98dfba6e10b6dce4fa 140 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.737 T 14-09-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AY555_RS05735 0d7b5792329f7b98dfba6e10b6dce4fa 140 Gene3D G3DSA:3.30.70.141 1 139 7.1E-59 T 14-09-2016 AY555_RS09280 bbdbe4a407c3dd4f2a301bc7eef7c4f1 278 Pfam PF00582 Universal stress protein family 155 276 3.3E-10 T 14-09-2016 IPR006016 UspA GO:0006950 AY555_RS09280 bbdbe4a407c3dd4f2a301bc7eef7c4f1 278 PRINTS PR01438 Universal stress protein signature 238 250 2.1E-6 T 14-09-2016 IPR006015 Universal stress protein A AY555_RS09280 bbdbe4a407c3dd4f2a301bc7eef7c4f1 278 PRINTS PR01438 Universal stress protein signature 256 278 2.1E-6 T 14-09-2016 IPR006015 Universal stress protein A AY555_RS09280 bbdbe4a407c3dd4f2a301bc7eef7c4f1 278 Gene3D G3DSA:3.40.50.620 137 278 2.1E-17 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS09280 bbdbe4a407c3dd4f2a301bc7eef7c4f1 278 SUPERFAMILY SSF52402 2 143 7.79E-14 T 14-09-2016 AY555_RS09280 bbdbe4a407c3dd4f2a301bc7eef7c4f1 278 Gene3D G3DSA:3.40.50.620 3 115 3.8E-8 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS09280 bbdbe4a407c3dd4f2a301bc7eef7c4f1 278 SUPERFAMILY SSF52402 154 277 3.85E-19 T 14-09-2016 AY555_RS04055 f4c5d78dadc116c39d16789d6abae31e 456 PIRSF PIRSF006603 11 453 2.9E-64 T 14-09-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AY555_RS04055 f4c5d78dadc116c39d16789d6abae31e 456 PANTHER PTHR11206 5 448 1.3E-90 T 14-09-2016 AY555_RS04055 f4c5d78dadc116c39d16789d6abae31e 456 TIGRFAM TIGR00797 matE: MATE efflux family protein 19 426 4.5E-73 T 14-09-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AY555_RS04055 f4c5d78dadc116c39d16789d6abae31e 456 Pfam PF01554 MatE 19 180 2.1E-22 T 14-09-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AY555_RS04055 f4c5d78dadc116c39d16789d6abae31e 456 Pfam PF01554 MatE 247 412 3.8E-26 T 14-09-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AY555_RS00065 150742190a3af5c03789ebda53b6845b 136 PANTHER PTHR30435:SF2 1 136 4.7E-39 T 14-09-2016 AY555_RS00065 150742190a3af5c03789ebda53b6845b 136 PANTHER PTHR30435 1 136 4.7E-39 T 14-09-2016 AY555_RS00065 150742190a3af5c03789ebda53b6845b 136 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 9 136 9.3E-37 T 14-09-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 AY555_RS00065 150742190a3af5c03789ebda53b6845b 136 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 86 134 3.4E-9 T 14-09-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AY555_RS00065 150742190a3af5c03789ebda53b6845b 136 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 14 34 - T 14-09-2016 IPR019776 Flagellar basal body rod protein, conserved site AY555_RS06120 04758960c49b4ea86351ed2b94abb6bd 372 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 11 147 1.8E-28 T 14-09-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AY555_RS06120 04758960c49b4ea86351ed2b94abb6bd 372 PANTHER PTHR21015 10 366 4.9E-81 T 14-09-2016 AY555_RS06120 04758960c49b4ea86351ed2b94abb6bd 372 PANTHER PTHR21015:SF22 10 366 4.9E-81 T 14-09-2016 AY555_RS06120 04758960c49b4ea86351ed2b94abb6bd 372 Gene3D G3DSA:3.40.50.2000 10 195 1.1E-50 T 14-09-2016 AY555_RS06120 04758960c49b4ea86351ed2b94abb6bd 372 Gene3D G3DSA:3.40.50.2000 196 363 4.4E-25 T 14-09-2016 AY555_RS06120 04758960c49b4ea86351ed2b94abb6bd 372 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 11 366 31.717 T 14-09-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AY555_RS06120 04758960c49b4ea86351ed2b94abb6bd 372 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 192 355 1.2E-34 T 14-09-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AY555_RS06120 04758960c49b4ea86351ed2b94abb6bd 372 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 10 358 1.8E-82 T 14-09-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AY555_RS06120 04758960c49b4ea86351ed2b94abb6bd 372 SUPERFAMILY SSF53756 10 365 7.97E-96 T 14-09-2016 AY555_RS01890 746aae3ccd79575a258da98045a6c633 191 TIGRFAM TIGR01848 PHA_reg_PhaR: polyhydroxyalkanoate synthesis repressor PhaR 10 115 6.7E-44 T 14-09-2016 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR AY555_RS01890 746aae3ccd79575a258da98045a6c633 191 Pfam PF07879 PHB/PHA accumulation regulator DNA-binding domain 10 70 1.1E-29 T 14-09-2016 IPR012909 PHA accumulation regulator DNA-binding, N-terminal AY555_RS01890 746aae3ccd79575a258da98045a6c633 191 Pfam PF05233 PHB accumulation regulatory domain 75 114 1.6E-15 T 14-09-2016 IPR007897 PHB accumulation regulatory AY555_RS00375 7a13f1e5d45c7939a490054855f5f3f8 265 Pfam PF04344 Chemotaxis phosphatase, CheZ 175 263 1.7E-7 T 14-09-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- AY555_RS00375 7a13f1e5d45c7939a490054855f5f3f8 265 SUPERFAMILY SSF75708 96 265 1.7E-35 T 14-09-2016 AY555_RS00375 7a13f1e5d45c7939a490054855f5f3f8 265 Gene3D G3DSA:1.10.287.500 124 168 2.8E-4 T 14-09-2016 AY555_RS00375 7a13f1e5d45c7939a490054855f5f3f8 265 Gene3D G3DSA:1.10.287.500 175 217 1.5E-10 T 14-09-2016 AY555_RS00940 d515d205dba0a3781534ee5b23d687c4 126 Gene3D G3DSA:3.90.470.10 14 124 5.2E-37 T 14-09-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AY555_RS00940 d515d205dba0a3781534ee5b23d687c4 126 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 13 122 23.883 T 14-09-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 AY555_RS00940 d515d205dba0a3781534ee5b23d687c4 126 SUPERFAMILY SSF54843 11 124 1.15E-38 T 14-09-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AY555_RS00940 d515d205dba0a3781534ee5b23d687c4 126 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 18 119 1.4E-28 T 14-09-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 AY555_RS00940 d515d205dba0a3781534ee5b23d687c4 126 PANTHER PTHR13501 8 126 2.0E-37 T 14-09-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 AY555_RS00940 d515d205dba0a3781534ee5b23d687c4 126 ProSitePatterns PS00464 Ribosomal protein L22 signature. 95 119 - T 14-09-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00940 d515d205dba0a3781534ee5b23d687c4 126 Pfam PF00237 Ribosomal protein L22p/L17e 21 119 5.8E-27 T 14-09-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AY555_RS01385 5e706e27dc1e9639b620c84ae1152398 278 PANTHER PTHR10314:SF4 20 60 1.1E-23 T 14-09-2016 AY555_RS01385 5e706e27dc1e9639b620c84ae1152398 278 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 17 252 1.8E-73 T 14-09-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AY555_RS01385 5e706e27dc1e9639b620c84ae1152398 278 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 57 70 - T 14-09-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AY555_RS01385 5e706e27dc1e9639b620c84ae1152398 278 SUPERFAMILY SSF51366 11 254 8.63E-89 T 14-09-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AY555_RS01385 5e706e27dc1e9639b620c84ae1152398 278 PANTHER PTHR10314 20 60 1.1E-23 T 14-09-2016 AY555_RS01385 5e706e27dc1e9639b620c84ae1152398 278 PANTHER PTHR10314:SF4 83 139 1.1E-23 T 14-09-2016 AY555_RS01385 5e706e27dc1e9639b620c84ae1152398 278 Gene3D G3DSA:3.20.20.70 12 274 4.4E-99 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS01385 5e706e27dc1e9639b620c84ae1152398 278 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 23 272 35.011 T 14-09-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AY555_RS01385 5e706e27dc1e9639b620c84ae1152398 278 PANTHER PTHR10314 83 139 1.1E-23 T 14-09-2016 AY555_RS01385 5e706e27dc1e9639b620c84ae1152398 278 Pfam PF00290 Tryptophan synthase alpha chain 17 256 1.6E-91 T 14-09-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AY555_RS07350 9ff38c6d21039d9306fc3597969fb755 279 Gene3D G3DSA:3.40.50.150 1 274 4.1E-100 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS07350 9ff38c6d21039d9306fc3597969fb755 279 PANTHER PTHR37426 1 278 3.8E-110 T 14-09-2016 AY555_RS07350 9ff38c6d21039d9306fc3597969fb755 279 SUPERFAMILY SSF53335 8 274 3.33E-84 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS07350 9ff38c6d21039d9306fc3597969fb755 279 PANTHER PTHR37426:SF1 1 278 3.8E-110 T 14-09-2016 AY555_RS07350 9ff38c6d21039d9306fc3597969fb755 279 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 32 275 9.6E-80 T 14-09-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 AY555_RS07350 9ff38c6d21039d9306fc3597969fb755 279 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 1 264 40.113 T 14-09-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 AY555_RS08690 2ec36014ca3c032efa44d427923016c2 263 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 255 36.165 T 14-09-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 AY555_RS08690 2ec36014ca3c032efa44d427923016c2 263 PANTHER PTHR34265 1 255 1.5E-69 T 14-09-2016 AY555_RS08690 2ec36014ca3c032efa44d427923016c2 263 SUPERFAMILY SSF53067 1 122 8.92E-32 T 14-09-2016 AY555_RS08690 2ec36014ca3c032efa44d427923016c2 263 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 2 250 1.4E-68 T 14-09-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 AY555_RS08690 2ec36014ca3c032efa44d427923016c2 263 Gene3D G3DSA:3.30.420.40 96 258 5.5E-52 T 14-09-2016 AY555_RS08690 2ec36014ca3c032efa44d427923016c2 263 SUPERFAMILY SSF53067 125 254 6.91E-40 T 14-09-2016 AY555_RS08690 2ec36014ca3c032efa44d427923016c2 263 Pfam PF03309 Type III pantothenate kinase 2 206 2.7E-69 T 14-09-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 AY555_RS02305 9dd673402759b8a408489f60db3a50ea 237 Gene3D G3DSA:3.40.50.2300 5 127 3.5E-39 T 14-09-2016 AY555_RS02305 9dd673402759b8a408489f60db3a50ea 237 SMART SM00862 154 230 1.0E-22 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AY555_RS02305 9dd673402759b8a408489f60db3a50ea 237 SUPERFAMILY SSF46894 135 231 1.9E-22 T 14-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AY555_RS02305 9dd673402759b8a408489f60db3a50ea 237 Gene3D G3DSA:1.10.10.10 134 233 1.9E-25 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS02305 9dd673402759b8a408489f60db3a50ea 237 PANTHER PTHR26402 6 234 5.1E-78 T 14-09-2016 AY555_RS02305 9dd673402759b8a408489f60db3a50ea 237 PANTHER PTHR26402:SF292 6 234 5.1E-78 T 14-09-2016 AY555_RS02305 9dd673402759b8a408489f60db3a50ea 237 SMART SM00448 6 116 5.8E-41 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS02305 9dd673402759b8a408489f60db3a50ea 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 230 8.6E-21 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AY555_RS02305 9dd673402759b8a408489f60db3a50ea 237 SUPERFAMILY SSF52172 4 125 1.85E-39 T 14-09-2016 IPR011006 CheY-like superfamily AY555_RS02305 9dd673402759b8a408489f60db3a50ea 237 Pfam PF00072 Response regulator receiver domain 8 117 8.7E-29 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS09690 ef329d91357812ebfbe2b5ac5c237178 348 Gene3D G3DSA:3.40.50.2000 149 324 5.0E-37 T 14-09-2016 AY555_RS09690 ef329d91357812ebfbe2b5ac5c237178 348 Pfam PF00534 Glycosyl transferases group 1 172 324 3.2E-39 T 14-09-2016 IPR001296 Glycosyl transferase, family 1 AY555_RS09690 ef329d91357812ebfbe2b5ac5c237178 348 Pfam PF13439 Glycosyltransferase Family 4 16 158 1.8E-10 T 14-09-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AY555_RS09690 ef329d91357812ebfbe2b5ac5c237178 348 PANTHER PTHR12526 16 346 8.4E-57 T 14-09-2016 AY555_RS09690 ef329d91357812ebfbe2b5ac5c237178 348 SUPERFAMILY SSF53756 13 346 1.88E-76 T 14-09-2016 AY555_RS05520 909a2538a55021712ed8fa942742241f 256 Pfam PF05711 Macrocin-O-methyltransferase (TylF) 60 230 7.7E-16 T 14-09-2016 IPR008884 Macrocin-O-methyltransferase AY555_RS05520 909a2538a55021712ed8fa942742241f 256 PANTHER PTHR40036 1 228 1.3E-20 T 14-09-2016 AY555_RS05520 909a2538a55021712ed8fa942742241f 256 PANTHER PTHR40036:SF1 1 228 1.3E-20 T 14-09-2016 AY555_RS05520 909a2538a55021712ed8fa942742241f 256 SUPERFAMILY SSF53335 7 105 3.07E-13 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS05520 909a2538a55021712ed8fa942742241f 256 SUPERFAMILY SSF53335 149 216 3.07E-13 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS05520 909a2538a55021712ed8fa942742241f 256 Gene3D G3DSA:3.40.50.150 122 231 4.0E-10 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS05520 909a2538a55021712ed8fa942742241f 256 Gene3D G3DSA:3.40.50.150 62 83 4.0E-10 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS03250 1e1010b329cc0a9f4bf60b3c6ee6bd9a 460 SUPERFAMILY SSF48452 330 440 4.49E-13 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS03250 1e1010b329cc0a9f4bf60b3c6ee6bd9a 460 Gene3D G3DSA:1.25.40.10 134 253 4.5E-21 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS03250 1e1010b329cc0a9f4bf60b3c6ee6bd9a 460 Gene3D G3DSA:1.25.40.10 321 440 4.5E-21 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS03250 1e1010b329cc0a9f4bf60b3c6ee6bd9a 460 SUPERFAMILY SSF48452 150 255 2.28E-10 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS03250 1e1010b329cc0a9f4bf60b3c6ee6bd9a 460 Pfam PF13432 Tetratricopeptide repeat 215 267 7.2E-5 T 14-09-2016 AY555_RS03250 1e1010b329cc0a9f4bf60b3c6ee6bd9a 460 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 2 118 8.1E-23 T 14-09-2016 IPR017560 Cytochrome c-type biogenesis protein CcmI AY555_RS03250 1e1010b329cc0a9f4bf60b3c6ee6bd9a 460 SMART SM00028 408 441 150.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AY555_RS03250 1e1010b329cc0a9f4bf60b3c6ee6bd9a 460 SMART SM00028 333 366 9.2 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AY555_RS03250 1e1010b329cc0a9f4bf60b3c6ee6bd9a 460 SMART SM00028 161 194 91.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AY555_RS07520 9a5b8a236b36417bb5cbbc2a2ca0c3f6 262 Gene3D G3DSA:1.25.40.10 128 247 1.1E-10 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS07520 9a5b8a236b36417bb5cbbc2a2ca0c3f6 262 PANTHER PTHR26312:SF74 147 249 2.1E-13 T 14-09-2016 AY555_RS07520 9a5b8a236b36417bb5cbbc2a2ca0c3f6 262 PANTHER PTHR26312:SF74 33 45 2.1E-13 T 14-09-2016 AY555_RS07520 9a5b8a236b36417bb5cbbc2a2ca0c3f6 262 PANTHER PTHR26312 147 249 2.1E-13 T 14-09-2016 AY555_RS07520 9a5b8a236b36417bb5cbbc2a2ca0c3f6 262 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 136 247 9.8E-37 T 14-09-2016 IPR014162 Tol-Pal system, YbgF AY555_RS07520 9a5b8a236b36417bb5cbbc2a2ca0c3f6 262 Pfam PF13174 Tetratricopeptide repeat 212 241 9.3E-4 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AY555_RS07520 9a5b8a236b36417bb5cbbc2a2ca0c3f6 262 SUPERFAMILY SSF48452 132 248 1.11E-11 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS07520 9a5b8a236b36417bb5cbbc2a2ca0c3f6 262 Pfam PF13432 Tetratricopeptide repeat 145 205 7.9E-9 T 14-09-2016 AY555_RS07520 9a5b8a236b36417bb5cbbc2a2ca0c3f6 262 PANTHER PTHR26312 33 45 2.1E-13 T 14-09-2016 AY555_RS02395 3fca9c6f0e2657949db89d1b774a6a00 800 Gene3D G3DSA:3.50.40.10 227 397 4.9E-74 T 14-09-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AY555_RS02395 3fca9c6f0e2657949db89d1b774a6a00 800 PANTHER PTHR10947 2 799 3.5E-236 T 14-09-2016 AY555_RS02395 3fca9c6f0e2657949db89d1b774a6a00 800 SMART SM00874 405 473 5.4E-24 T 14-09-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 AY555_RS02395 3fca9c6f0e2657949db89d1b774a6a00 800 SUPERFAMILY SSF54991 704 799 2.88E-25 T 14-09-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 AY555_RS02395 3fca9c6f0e2657949db89d1b774a6a00 800 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 796 4.3E-211 T 14-09-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AY555_RS02395 3fca9c6f0e2657949db89d1b774a6a00 800 Pfam PF01588 Putative tRNA binding domain 46 144 2.5E-22 T 14-09-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 AY555_RS02395 3fca9c6f0e2657949db89d1b774a6a00 800 SUPERFAMILY SSF50249 35 189 2.86E-39 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS02395 3fca9c6f0e2657949db89d1b774a6a00 800 Gene3D G3DSA:3.30.56.20 405 476 6.8E-22 T 14-09-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 AY555_RS02395 3fca9c6f0e2657949db89d1b774a6a00 800 SMART SM00896 706 799 3.0E-34 T 14-09-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 AY555_RS02395 3fca9c6f0e2657949db89d1b774a6a00 800 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 793 39.681 T 14-09-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AY555_RS02395 3fca9c6f0e2657949db89d1b774a6a00 800 SUPERFAMILY SSF56037 213 402 3.4E-67 T 14-09-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AY555_RS02395 3fca9c6f0e2657949db89d1b774a6a00 800 Gene3D G3DSA:3.30.56.10 1 38 8.6E-24 T 14-09-2016 AY555_RS02395 3fca9c6f0e2657949db89d1b774a6a00 800 PANTHER PTHR10947:SF0 2 799 3.5E-236 T 14-09-2016 AY555_RS02395 3fca9c6f0e2657949db89d1b774a6a00 800 SUPERFAMILY SSF55681 469 689 2.19E-40 T 14-09-2016 AY555_RS02395 3fca9c6f0e2657949db89d1b774a6a00 800 Pfam PF03147 Ferredoxin-fold anticodon binding domain 706 799 1.6E-23 T 14-09-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 AY555_RS02395 3fca9c6f0e2657949db89d1b774a6a00 800 SMART SM00873 217 389 3.4E-80 T 14-09-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AY555_RS02395 3fca9c6f0e2657949db89d1b774a6a00 800 Pfam PF03483 B3/4 domain 217 389 2.1E-60 T 14-09-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AY555_RS02395 3fca9c6f0e2657949db89d1b774a6a00 800 Gene3D G3DSA:2.40.50.140 42 226 9.1E-44 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS02395 3fca9c6f0e2657949db89d1b774a6a00 800 Gene3D G3DSA:3.30.930.10 491 690 7.3E-57 T 14-09-2016 AY555_RS02395 3fca9c6f0e2657949db89d1b774a6a00 800 SUPERFAMILY SSF46955 406 477 1.46E-17 T 14-09-2016 IPR009061 Putative DNA-binding domain AY555_RS02395 3fca9c6f0e2657949db89d1b774a6a00 800 Pfam PF03484 tRNA synthetase B5 domain 408 473 1.6E-17 T 14-09-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 AY555_RS02395 3fca9c6f0e2657949db89d1b774a6a00 800 Gene3D G3DSA:3.30.70.380 708 799 9.8E-26 T 14-09-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 AY555_RS00525 6fbbd1a318a598a47f04d18ea8a771a0 295 SUPERFAMILY SSF56214 169 284 3.27E-18 T 14-09-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AY555_RS00525 6fbbd1a318a598a47f04d18ea8a771a0 295 PANTHER PTHR12215:SF10 83 242 1.1E-32 T 14-09-2016 AY555_RS00525 6fbbd1a318a598a47f04d18ea8a771a0 295 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 170 249 5.4E-11 T 14-09-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AY555_RS00525 6fbbd1a318a598a47f04d18ea8a771a0 295 Gene3D G3DSA:3.90.470.20 181 244 9.4E-14 T 14-09-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AY555_RS00525 6fbbd1a318a598a47f04d18ea8a771a0 295 Gene3D G3DSA:3.90.470.20 78 180 2.2E-22 T 14-09-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AY555_RS00525 6fbbd1a318a598a47f04d18ea8a771a0 295 PANTHER PTHR12215 83 242 1.1E-32 T 14-09-2016 AY555_RS00525 6fbbd1a318a598a47f04d18ea8a771a0 295 SUPERFAMILY SSF56214 79 156 9.16E-18 T 14-09-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AY555_RS05045 d44089c06f8da5e6a3f5f1563750a9db 253 SMART SM00271 185 250 1.7E-5 T 14-09-2016 IPR001623 DnaJ domain AY555_RS05045 d44089c06f8da5e6a3f5f1563750a9db 253 Pfam PF00226 DnaJ domain 187 242 2.3E-7 T 14-09-2016 IPR001623 DnaJ domain AY555_RS05045 d44089c06f8da5e6a3f5f1563750a9db 253 Gene3D G3DSA:1.10.287.110 184 244 6.0E-9 T 14-09-2016 IPR001623 DnaJ domain AY555_RS05045 d44089c06f8da5e6a3f5f1563750a9db 253 SUPERFAMILY SSF46565 186 245 1.57E-11 T 14-09-2016 IPR001623 DnaJ domain AY555_RS09550 98be64eb5d28aaec7159a01cb03b2d8e 80 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 2 79 6.2E-24 T 14-09-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AY555_RS09550 98be64eb5d28aaec7159a01cb03b2d8e 80 PANTHER PTHR34696 1 80 3.4E-29 T 14-09-2016 AY555_RS09550 98be64eb5d28aaec7159a01cb03b2d8e 80 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 9 78 4.0E-18 T 14-09-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AY555_RS09550 98be64eb5d28aaec7159a01cb03b2d8e 80 Gene3D G3DSA:3.30.1280.10 2 80 9.0E-33 T 14-09-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AY555_RS09550 98be64eb5d28aaec7159a01cb03b2d8e 80 SUPERFAMILY SSF82697 2 77 2.27E-27 T 14-09-2016 AY555_RS09550 98be64eb5d28aaec7159a01cb03b2d8e 80 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 2 78 4.6E-31 T 14-09-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AY555_RS09550 98be64eb5d28aaec7159a01cb03b2d8e 80 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 1 78 21.002 T 14-09-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AY555_RS04340 e024ded92657a08e0d3d5f636c3a8d05 161 Pfam PF00011 Hsp20/alpha crystallin family 44 134 1.0E-15 T 14-09-2016 IPR002068 Alpha crystallin/Hsp20 domain AY555_RS04340 e024ded92657a08e0d3d5f636c3a8d05 161 SUPERFAMILY SSF49764 30 134 3.84E-19 T 14-09-2016 IPR008978 HSP20-like chaperone AY555_RS04340 e024ded92657a08e0d3d5f636c3a8d05 161 PANTHER PTHR11527:SF127 3 142 6.2E-29 T 14-09-2016 AY555_RS04340 e024ded92657a08e0d3d5f636c3a8d05 161 Gene3D G3DSA:2.60.40.790 20 134 1.2E-14 T 14-09-2016 IPR008978 HSP20-like chaperone AY555_RS04340 e024ded92657a08e0d3d5f636c3a8d05 161 PANTHER PTHR11527 3 142 6.2E-29 T 14-09-2016 IPR031107 Small heat shock protein HSP20 AY555_RS02565 5f3da54aee9455227b8d90b2d94172f8 487 Pfam PF01050 Mannose-6-phosphate isomerase 326 476 2.5E-72 T 14-09-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 AY555_RS02565 5f3da54aee9455227b8d90b2d94172f8 487 SUPERFAMILY SSF51182 192 480 1.51E-80 T 14-09-2016 IPR011051 RmlC-like cupin domain AY555_RS02565 5f3da54aee9455227b8d90b2d94172f8 487 SUPERFAMILY SSF53448 7 290 1.43E-56 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AY555_RS02565 5f3da54aee9455227b8d90b2d94172f8 487 Gene3D G3DSA:3.90.550.10 6 282 6.8E-85 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AY555_RS02565 5f3da54aee9455227b8d90b2d94172f8 487 PANTHER PTHR12526 162 300 4.2E-96 T 14-09-2016 AY555_RS02565 5f3da54aee9455227b8d90b2d94172f8 487 PANTHER PTHR12526 363 481 4.2E-96 T 14-09-2016 AY555_RS02565 5f3da54aee9455227b8d90b2d94172f8 487 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 7 480 6.7E-190 T 14-09-2016 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 AY555_RS02565 5f3da54aee9455227b8d90b2d94172f8 487 Pfam PF00483 Nucleotidyl transferase 9 297 7.4E-54 T 14-09-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 AY555_RS02565 5f3da54aee9455227b8d90b2d94172f8 487 PANTHER PTHR12526:SF387 162 300 4.2E-96 T 14-09-2016 AY555_RS02565 5f3da54aee9455227b8d90b2d94172f8 487 PANTHER PTHR12526:SF387 363 481 4.2E-96 T 14-09-2016 AY555_RS02565 5f3da54aee9455227b8d90b2d94172f8 487 Gene3D G3DSA:2.60.120.10 368 480 4.0E-44 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AY555_RS04805 e2bbb52c619d0d3e7576efb4d8f57619 229 PANTHER PTHR38765 1 228 9.0E-14 T 14-09-2016 AY555_RS04805 e2bbb52c619d0d3e7576efb4d8f57619 229 Pfam PF04340 Protein of unknown function, DUF484 12 225 1.1E-28 T 14-09-2016 IPR007435 Protein of unknown function DUF484 AY555_RS04720 5e3ada93ee47a41d805416079ea7ca89 294 SUPERFAMILY SSF53807 32 283 1.14E-48 T 14-09-2016 AY555_RS04720 5e3ada93ee47a41d805416079ea7ca89 294 PANTHER PTHR30535 30 283 6.6E-75 T 14-09-2016 AY555_RS04720 5e3ada93ee47a41d805416079ea7ca89 294 PANTHER PTHR30535:SF4 30 283 6.6E-75 T 14-09-2016 AY555_RS04720 5e3ada93ee47a41d805416079ea7ca89 294 Pfam PF01497 Periplasmic binding protein 35 263 4.0E-32 T 14-09-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AY555_RS04720 5e3ada93ee47a41d805416079ea7ca89 294 Gene3D G3DSA:3.40.50.1980 32 151 7.6E-26 T 14-09-2016 AY555_RS04720 5e3ada93ee47a41d805416079ea7ca89 294 Gene3D G3DSA:3.40.50.1980 167 283 1.7E-16 T 14-09-2016 AY555_RS00365 c9ce65387d63e54e9c71f77d4dff967d 288 PANTHER PTHR23289 1 285 1.9E-86 T 14-09-2016 AY555_RS00365 c9ce65387d63e54e9c71f77d4dff967d 288 PANTHER PTHR23289:SF2 1 285 1.9E-86 T 14-09-2016 AY555_RS00365 c9ce65387d63e54e9c71f77d4dff967d 288 Pfam PF02628 Cytochrome oxidase assembly protein 1 279 8.6E-83 T 14-09-2016 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 UniPathway: UPA00269 AY555_RS04655 2749e442fd63002dc072f1b37b5a8620 109 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 43 95 1.2E-18 T 14-09-2016 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter AY555_RS04655 2749e442fd63002dc072f1b37b5a8620 109 PIRSF PIRSF032126 1 109 3.6E-25 T 14-09-2016 IPR016989 ATP synthase protein I, alphaproteobacterial AY555_RS07650 e14bdae836455eed87de136291dae656 264 PANTHER PTHR24220:SF534 3 251 2.5E-108 T 14-09-2016 AY555_RS07650 e14bdae836455eed87de136291dae656 264 Pfam PF00005 ABC transporter 22 177 9.3E-27 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AY555_RS07650 e14bdae836455eed87de136291dae656 264 PANTHER PTHR24220 3 251 2.5E-108 T 14-09-2016 AY555_RS07650 e14bdae836455eed87de136291dae656 264 SMART SM00382 31 235 1.5E-6 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS07650 e14bdae836455eed87de136291dae656 264 Gene3D G3DSA:3.40.50.300 1 231 2.7E-56 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS07650 e14bdae836455eed87de136291dae656 264 SUPERFAMILY SSF52540 2 232 2.55E-50 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS07740 9ba90685de3bcab88bf2f1ebe26bf8fa 234 Pfam PF00005 ABC transporter 31 179 8.9E-32 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AY555_RS07740 9ba90685de3bcab88bf2f1ebe26bf8fa 234 PANTHER PTHR24220 13 225 2.3E-85 T 14-09-2016 AY555_RS07740 9ba90685de3bcab88bf2f1ebe26bf8fa 234 SMART SM00382 40 227 1.1E-14 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS07740 9ba90685de3bcab88bf2f1ebe26bf8fa 234 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AY555_RS07740 9ba90685de3bcab88bf2f1ebe26bf8fa 234 SUPERFAMILY SSF52540 12 222 1.19E-62 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS07740 9ba90685de3bcab88bf2f1ebe26bf8fa 234 Gene3D G3DSA:3.40.50.300 9 226 4.1E-60 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS07740 9ba90685de3bcab88bf2f1ebe26bf8fa 234 PANTHER PTHR24220:SF111 13 225 2.3E-85 T 14-09-2016 AY555_RS06975 4809fca81ffeff240c515a5c4288f97b 449 PANTHER PTHR13932 1 445 8.6E-178 T 14-09-2016 AY555_RS06975 4809fca81ffeff240c515a5c4288f97b 449 Pfam PF06969 HemN C-terminal domain 359 424 6.8E-10 T 14-09-2016 IPR010723 HemN, C-terminal AY555_RS06975 4809fca81ffeff240c515a5c4288f97b 449 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 2 449 1.6E-137 T 14-09-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 AY555_RS06975 4809fca81ffeff240c515a5c4288f97b 449 SUPERFAMILY SSF102114 2 438 6.15E-121 T 14-09-2016 AY555_RS06975 4809fca81ffeff240c515a5c4288f97b 449 PANTHER PTHR13932:SF6 1 445 8.6E-178 T 14-09-2016 AY555_RS06975 4809fca81ffeff240c515a5c4288f97b 449 Gene3D G3DSA:3.80.30.20 47 242 2.4E-28 T 14-09-2016 IPR023404 Radical SAM, alpha/beta horseshoe AY555_RS06975 4809fca81ffeff240c515a5c4288f97b 449 PIRSF PIRSF000167 1 449 5.6E-164 T 14-09-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 AY555_RS06975 4809fca81ffeff240c515a5c4288f97b 449 SMART SM00729 46 267 1.6E-45 T 14-09-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AY555_RS06975 4809fca81ffeff240c515a5c4288f97b 449 Pfam PF04055 Radical SAM superfamily 53 222 1.6E-19 T 14-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AY555_RS04115 cfbfa3f31aef4ca41718f98ac898cee5 279 Gene3D G3DSA:1.25.40.10 203 259 2.1E-7 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS04115 cfbfa3f31aef4ca41718f98ac898cee5 279 SUPERFAMILY SSF48452 204 260 3.6E-8 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS04115 cfbfa3f31aef4ca41718f98ac898cee5 279 PANTHER PTHR31350 51 279 4.3E-31 T 14-09-2016 AY555_RS04115 cfbfa3f31aef4ca41718f98ac898cee5 279 PANTHER PTHR31350:SF1 51 279 4.3E-31 T 14-09-2016 AY555_RS04115 cfbfa3f31aef4ca41718f98ac898cee5 279 Pfam PF13369 Transglutaminase-like superfamily 47 197 3.9E-41 T 14-09-2016 IPR032698 Protein SirB1, N-terminal AY555_RS04115 cfbfa3f31aef4ca41718f98ac898cee5 279 Pfam PF13371 Tetratricopeptide repeat 200 270 1.7E-17 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS00955 9e396694541a07646c668b899e3b75ff 104 PANTHER PTHR11620 14 100 7.1E-23 T 14-09-2016 AY555_RS00955 9e396694541a07646c668b899e3b75ff 104 SUPERFAMILY SSF54189 13 102 3.6E-30 T 14-09-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00955 9e396694541a07646c668b899e3b75ff 104 Gene3D G3DSA:3.30.70.330 11 103 2.1E-32 T 14-09-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 AY555_RS00955 9e396694541a07646c668b899e3b75ff 104 Pfam PF00276 Ribosomal protein L23 15 100 2.8E-29 T 14-09-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AY555_RS00955 9e396694541a07646c668b899e3b75ff 104 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 14 103 20.28 T 14-09-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AY555_RS04800 93c2af9592e4446fba38f8d0b0cd0905 310 Gene3D G3DSA:1.10.443.10 139 301 1.5E-44 T 14-09-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AY555_RS04800 93c2af9592e4446fba38f8d0b0cd0905 310 PANTHER PTHR30349 15 310 1.5E-74 T 14-09-2016 AY555_RS04800 93c2af9592e4446fba38f8d0b0cd0905 310 PANTHER PTHR30349:SF5 15 310 1.5E-74 T 14-09-2016 AY555_RS04800 93c2af9592e4446fba38f8d0b0cd0905 310 Pfam PF00589 Phage integrase family 147 296 1.3E-32 T 14-09-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AY555_RS04800 93c2af9592e4446fba38f8d0b0cd0905 310 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 16 104 2.7E-18 T 14-09-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AY555_RS04800 93c2af9592e4446fba38f8d0b0cd0905 310 SUPERFAMILY SSF56349 13 301 2.15E-46 T 14-09-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AY555_RS04800 93c2af9592e4446fba38f8d0b0cd0905 310 Gene3D G3DSA:1.10.150.130 13 110 1.0E-22 T 14-09-2016 IPR023109 Integrase/recombinase, N-terminal AY555_RS04800 93c2af9592e4446fba38f8d0b0cd0905 310 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 12 310 30.323 T 14-09-2016 IPR023009 Tyrosine recombinase XerC/XerD AY555_RS08590 a2b71a841e7d64663f29fafff31546a5 917 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 38 502 2.8E-150 T 14-09-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS08590 a2b71a841e7d64663f29fafff31546a5 917 SUPERFAMILY SSF101904 529 741 1.7E-99 T 14-09-2016 AY555_RS08590 a2b71a841e7d64663f29fafff31546a5 917 SUPERFAMILY SSF101904 792 897 1.7E-99 T 14-09-2016 AY555_RS08590 a2b71a841e7d64663f29fafff31546a5 917 PANTHER PTHR10169:SF48 446 739 0.0 T 14-09-2016 AY555_RS08590 a2b71a841e7d64663f29fafff31546a5 917 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 14 891 0.0 T 14-09-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AY555_RS08590 a2b71a841e7d64663f29fafff31546a5 917 SMART SM00434 17 495 1.1E-278 T 14-09-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS08590 a2b71a841e7d64663f29fafff31546a5 917 Gene3D G3DSA:1.10.268.10 368 493 2.6E-40 T 14-09-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 AY555_RS08590 a2b71a841e7d64663f29fafff31546a5 917 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 893 28.825 T 14-09-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AY555_RS08590 a2b71a841e7d64663f29fafff31546a5 917 Gene3D G3DSA:2.120.10.90 792 891 3.6E-120 T 14-09-2016 AY555_RS08590 a2b71a841e7d64663f29fafff31546a5 917 Gene3D G3DSA:2.120.10.90 527 740 3.6E-120 T 14-09-2016 AY555_RS08590 a2b71a841e7d64663f29fafff31546a5 917 PANTHER PTHR10169 790 866 0.0 T 14-09-2016 AY555_RS08590 a2b71a841e7d64663f29fafff31546a5 917 PANTHER PTHR10169 11 419 0.0 T 14-09-2016 AY555_RS08590 a2b71a841e7d64663f29fafff31546a5 917 PANTHER PTHR10169 446 739 0.0 T 14-09-2016 AY555_RS08590 a2b71a841e7d64663f29fafff31546a5 917 SUPERFAMILY SSF56719 36 517 1.83E-177 T 14-09-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 AY555_RS08590 a2b71a841e7d64663f29fafff31546a5 917 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 688 1.8E-7 T 14-09-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AY555_RS08590 a2b71a841e7d64663f29fafff31546a5 917 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 795 840 3.9E-11 T 14-09-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AY555_RS08590 a2b71a841e7d64663f29fafff31546a5 917 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 586 633 1.1E-5 T 14-09-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AY555_RS08590 a2b71a841e7d64663f29fafff31546a5 917 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 534 581 1.0E-14 T 14-09-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AY555_RS08590 a2b71a841e7d64663f29fafff31546a5 917 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 845 891 1.3E-11 T 14-09-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AY555_RS08590 a2b71a841e7d64663f29fafff31546a5 917 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 739 1.7E-8 T 14-09-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AY555_RS08590 a2b71a841e7d64663f29fafff31546a5 917 Gene3D G3DSA:3.30.1360.40 242 338 2.2E-39 T 14-09-2016 IPR024946 Arginine repressor C-terminal-like domain AY555_RS08590 a2b71a841e7d64663f29fafff31546a5 917 PANTHER PTHR10169:SF48 790 866 0.0 T 14-09-2016 AY555_RS08590 a2b71a841e7d64663f29fafff31546a5 917 PANTHER PTHR10169:SF48 11 419 0.0 T 14-09-2016 AY555_RS08590 a2b71a841e7d64663f29fafff31546a5 917 Gene3D G3DSA:3.90.199.10 40 222 1.0E-83 T 14-09-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 AY555_RS00725 49db73f7084de3a5e8bf6fc5b48ec57c 118 Pfam PF05656 Protein of unknown function (DUF805) 10 112 1.5E-22 T 14-09-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 AY555_RS04320 504435c26a0ab6bf89d5d31f89923e5a 223 PIRSF PIRSF002764 1 221 6.6E-75 T 14-09-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AY555_RS04320 504435c26a0ab6bf89d5d31f89923e5a 223 PANTHER PTHR30070:SF1 1 221 1.3E-59 T 14-09-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AY555_RS04320 504435c26a0ab6bf89d5d31f89923e5a 223 PANTHER PTHR30070 1 221 1.3E-59 T 14-09-2016 AY555_RS04320 504435c26a0ab6bf89d5d31f89923e5a 223 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 8 217 1.9E-74 T 14-09-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AY555_RS04320 504435c26a0ab6bf89d5d31f89923e5a 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 157 176 4.2E-64 T 14-09-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AY555_RS04320 504435c26a0ab6bf89d5d31f89923e5a 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 102 120 4.2E-64 T 14-09-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AY555_RS04320 504435c26a0ab6bf89d5d31f89923e5a 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 77 100 4.2E-64 T 14-09-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AY555_RS04320 504435c26a0ab6bf89d5d31f89923e5a 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 28 49 4.2E-64 T 14-09-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AY555_RS04320 504435c26a0ab6bf89d5d31f89923e5a 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 54 71 4.2E-64 T 14-09-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AY555_RS04320 504435c26a0ab6bf89d5d31f89923e5a 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 194 217 4.2E-64 T 14-09-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AY555_RS04320 504435c26a0ab6bf89d5d31f89923e5a 223 Pfam PF03379 CcmB protein 6 217 4.3E-75 T 14-09-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AY555_RS04500 f06ddd587edbd1a1253c816631c162b7 139 TIGRFAM TIGR00632 vsr: DNA mismatch endonuclease Vsr 5 105 4.7E-40 T 14-09-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 AY555_RS04500 f06ddd587edbd1a1253c816631c162b7 139 Pfam PF03852 DNA mismatch endonuclease Vsr 1 60 9.5E-24 T 14-09-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 AY555_RS04500 f06ddd587edbd1a1253c816631c162b7 139 SUPERFAMILY SSF52980 1 131 1.07E-46 T 14-09-2016 IPR011335 Restriction endonuclease type II-like AY555_RS04500 f06ddd587edbd1a1253c816631c162b7 139 Gene3D G3DSA:3.40.960.10 8 126 4.9E-48 T 14-09-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 AY555_RS05090 961555a34bc9ffb2b3b2a4791afd4060 171 Gene3D G3DSA:1.20.1550.10 9 166 3.4E-18 T 14-09-2016 IPR023380 Disulphide bond formation protein DsbB-like domain AY555_RS05090 961555a34bc9ffb2b3b2a4791afd4060 171 Pfam PF02600 Disulfide bond formation protein DsbB 9 155 3.0E-27 T 14-09-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 AY555_RS05090 961555a34bc9ffb2b3b2a4791afd4060 171 SUPERFAMILY SSF158442 14 157 4.32E-25 T 14-09-2016 AY555_RS05090 961555a34bc9ffb2b3b2a4791afd4060 171 PIRSF PIRSF033913 5 168 1.3E-22 T 14-09-2016 IPR024199 Uncharacterised conserved protein, DsbB-like AY555_RS00210 f5b063ff6a60f83ba7d7575cef131ca5 643 Gene3D G3DSA:1.25.40.10 27 236 2.3E-17 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS00210 f5b063ff6a60f83ba7d7575cef131ca5 643 SUPERFAMILY SSF48452 56 236 6.41E-12 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS00210 f5b063ff6a60f83ba7d7575cef131ca5 643 Pfam PF13844 Glycosyl transferase family 41 543 632 1.1E-6 T 14-09-2016 IPR029489 O-GlcNAc transferase, C-terminal UniPathway: UPA00378 AY555_RS04350 2f908f7fb4fb41d458bac315004d218b 147 SUPERFAMILY SSF82649 2 136 3.45E-44 T 14-09-2016 AY555_RS04350 2f908f7fb4fb41d458bac315004d218b 147 PANTHER PTHR12735 4 138 1.5E-44 T 14-09-2016 AY555_RS04350 2f908f7fb4fb41d458bac315004d218b 147 PANTHER PTHR12735:SF26 4 138 1.5E-44 T 14-09-2016 AY555_RS04350 2f908f7fb4fb41d458bac315004d218b 147 Pfam PF02657 Fe-S metabolism associated domain 7 130 6.8E-45 T 14-09-2016 IPR003808 Fe-S metabolism associated domain, SufE-like UniPathway: UPA00266 AY555_RS04350 2f908f7fb4fb41d458bac315004d218b 147 Gene3D G3DSA:3.90.1010.10 2 138 1.9E-50 T 14-09-2016 AY555_RS00520 897c43306c9f58fae4abd6b9a09eae40 299 Pfam PF03755 YicC-like family, N-terminal region 3 162 1.2E-30 T 14-09-2016 IPR013527 YicC-like, N-terminal AY555_RS00520 897c43306c9f58fae4abd6b9a09eae40 299 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 3 299 3.2E-60 T 14-09-2016 IPR005229 Conserved hypothetical protein CHP00255 AY555_RS00520 897c43306c9f58fae4abd6b9a09eae40 299 Pfam PF08340 Domain of unknown function (DUF1732) 215 299 5.3E-34 T 14-09-2016 IPR013551 Domain of unknown function DUF1732 AY555_RS00520 897c43306c9f58fae4abd6b9a09eae40 299 PANTHER PTHR30636 3 299 5.9E-77 T 14-09-2016 AY555_RS05270 8d602fc2d93677b124f3d555aed79da8 245 PANTHER PTHR24567 14 239 9.7E-59 T 14-09-2016 AY555_RS05270 8d602fc2d93677b124f3d555aed79da8 245 SUPERFAMILY SSF51206 40 158 4.06E-24 T 14-09-2016 IPR018490 Cyclic nucleotide-binding-like AY555_RS05270 8d602fc2d93677b124f3d555aed79da8 245 SMART SM00100 24 146 9.9E-10 T 14-09-2016 IPR000595 Cyclic nucleotide-binding domain AY555_RS05270 8d602fc2d93677b124f3d555aed79da8 245 SUPERFAMILY SSF46785 160 239 4.76E-17 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS05270 8d602fc2d93677b124f3d555aed79da8 245 SMART SM00419 182 231 7.8E-15 T 14-09-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AY555_RS05270 8d602fc2d93677b124f3d555aed79da8 245 Gene3D G3DSA:2.60.120.10 47 164 2.0E-17 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AY555_RS05270 8d602fc2d93677b124f3d555aed79da8 245 Gene3D G3DSA:1.10.10.10 165 239 1.7E-23 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS05270 8d602fc2d93677b124f3d555aed79da8 245 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 188 204 8.5E-11 T 14-09-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AY555_RS05270 8d602fc2d93677b124f3d555aed79da8 245 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 204 219 8.5E-11 T 14-09-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AY555_RS05270 8d602fc2d93677b124f3d555aed79da8 245 Pfam PF13545 Crp-like helix-turn-helix domain 163 238 3.5E-19 T 14-09-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AY555_RS05270 8d602fc2d93677b124f3d555aed79da8 245 Pfam PF00027 Cyclic nucleotide-binding domain 49 125 5.2E-13 T 14-09-2016 IPR000595 Cyclic nucleotide-binding domain AY555_RS05270 8d602fc2d93677b124f3d555aed79da8 245 PANTHER PTHR24567:SF28 14 239 9.7E-59 T 14-09-2016 AY555_RS05270 8d602fc2d93677b124f3d555aed79da8 245 ProSitePatterns PS00042 Crp-type HTH domain signature. 190 213 - T 14-09-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 AY555_RS01365 945c8654f30ee040d19bc9210aaa189c 259 Gene3D G3DSA:3.90.550.10 15 256 3.8E-67 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AY555_RS01365 945c8654f30ee040d19bc9210aaa189c 259 SUPERFAMILY SSF53448 15 256 1.33E-52 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AY555_RS01365 945c8654f30ee040d19bc9210aaa189c 259 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 15 248 1.9E-53 T 14-09-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 AY555_RS01365 945c8654f30ee040d19bc9210aaa189c 259 Pfam PF02348 Cytidylyltransferase 16 229 1.9E-40 T 14-09-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 AY555_RS01365 945c8654f30ee040d19bc9210aaa189c 259 PANTHER PTHR21485 15 258 5.4E-77 T 14-09-2016 AY555_RS01365 945c8654f30ee040d19bc9210aaa189c 259 PANTHER PTHR21485:SF4 15 258 5.4E-77 T 14-09-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 AY555_RS07530 08b73f5bf1c7d4e07610bf3d05645681 648 SUPERFAMILY SSF52540 145 394 6.21E-75 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS07530 08b73f5bf1c7d4e07610bf3d05645681 648 Pfam PF01434 Peptidase family M41 385 593 5.9E-79 T 14-09-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 AY555_RS07530 08b73f5bf1c7d4e07610bf3d05645681 648 Gene3D G3DSA:3.40.50.300 146 334 1.1E-65 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS07530 08b73f5bf1c7d4e07610bf3d05645681 648 ProSitePatterns PS00674 AAA-protein family signature. 294 312 - T 14-09-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 AY555_RS07530 08b73f5bf1c7d4e07610bf3d05645681 648 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 5 607 37.76 T 14-09-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 AY555_RS07530 08b73f5bf1c7d4e07610bf3d05645681 648 SUPERFAMILY SSF140990 405 604 1.44E-74 T 14-09-2016 AY555_RS07530 08b73f5bf1c7d4e07610bf3d05645681 648 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 103 596 3.1E-237 T 14-09-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 AY555_RS07530 08b73f5bf1c7d4e07610bf3d05645681 648 PANTHER PTHR23076 6 604 0.0 T 14-09-2016 AY555_RS07530 08b73f5bf1c7d4e07610bf3d05645681 648 Pfam PF06480 FtsH Extracellular 7 87 4.0E-9 T 14-09-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 AY555_RS07530 08b73f5bf1c7d4e07610bf3d05645681 648 Gene3D G3DSA:1.10.8.60 335 408 6.1E-29 T 14-09-2016 AY555_RS07530 08b73f5bf1c7d4e07610bf3d05645681 648 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 191 323 1.4E-45 T 14-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AY555_RS07530 08b73f5bf1c7d4e07610bf3d05645681 648 SMART SM00382 187 326 1.7E-25 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS02365 87b55962c63db572809d763c73b7445a 119 ProSitePatterns PS01117 MarR-type HTH domain signature. 62 96 - T 14-09-2016 IPR023187 Transcriptional regulator MarR-type, conserved site AY555_RS02365 87b55962c63db572809d763c73b7445a 119 Gene3D G3DSA:1.10.10.10 22 113 1.4E-18 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS02365 87b55962c63db572809d763c73b7445a 119 SUPERFAMILY SSF46785 26 107 4.97E-18 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS02365 87b55962c63db572809d763c73b7445a 119 SMART SM00347 20 116 0.0022 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AY555_RS02365 87b55962c63db572809d763c73b7445a 119 Pfam PF01047 MarR family 29 88 9.7E-13 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AY555_RS07455 a333665c65da4f4d43481103e1ed55ea 196 SUPERFAMILY SSF102829 3 86 1.44E-13 T 14-09-2016 IPR007838 Cell division protein ZapA-like AY555_RS07455 a333665c65da4f4d43481103e1ed55ea 196 Pfam PF05164 Cell division protein ZapA 4 94 5.2E-15 T 14-09-2016 IPR007838 Cell division protein ZapA-like AY555_RS00565 2adab5f8d4944fb216e3800a95a9b376 500 Gene3D G3DSA:3.30.300.20 416 493 1.4E-30 T 14-09-2016 IPR015946 K homology domain-like, alpha/beta AY555_RS00565 2adab5f8d4944fb216e3800a95a9b376 500 Gene3D G3DSA:3.40.50.300 231 415 1.7E-48 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS00565 2adab5f8d4944fb216e3800a95a9b376 500 Gene3D G3DSA:3.40.50.300 3 167 3.2E-41 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS00565 2adab5f8d4944fb216e3800a95a9b376 500 PIRSF PIRSF006485 1 499 3.5E-160 T 14-09-2016 IPR016484 GTP-binding protein EngA GO:0005525 AY555_RS00565 2adab5f8d4944fb216e3800a95a9b376 500 SUPERFAMILY SSF52540 3 165 3.52E-41 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS00565 2adab5f8d4944fb216e3800a95a9b376 500 PANTHER PTHR11649 215 495 5.4E-168 T 14-09-2016 AY555_RS00565 2adab5f8d4944fb216e3800a95a9b376 500 Hamap MF_00195 GTPase Der [der]. 2 494 37.068 T 14-09-2016 IPR016484 GTP-binding protein EngA GO:0005525 AY555_RS00565 2adab5f8d4944fb216e3800a95a9b376 500 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 410 491 6.6E-30 T 14-09-2016 IPR032859 GTPase Der, C-terminal KH-domain-like AY555_RS00565 2adab5f8d4944fb216e3800a95a9b376 500 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 156 6.0E-22 T 14-09-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AY555_RS00565 2adab5f8d4944fb216e3800a95a9b376 500 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 234 399 1.3E-27 T 14-09-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AY555_RS00565 2adab5f8d4944fb216e3800a95a9b376 500 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 235 255 3.6E-6 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AY555_RS00565 2adab5f8d4944fb216e3800a95a9b376 500 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 305 323 3.6E-6 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AY555_RS00565 2adab5f8d4944fb216e3800a95a9b376 500 PANTHER PTHR11649:SF68 1 168 5.4E-168 T 14-09-2016 AY555_RS00565 2adab5f8d4944fb216e3800a95a9b376 500 PANTHER PTHR11649:SF68 215 495 5.4E-168 T 14-09-2016 AY555_RS00565 2adab5f8d4944fb216e3800a95a9b376 500 PANTHER PTHR11649 1 168 5.4E-168 T 14-09-2016 AY555_RS00565 2adab5f8d4944fb216e3800a95a9b376 500 Pfam PF01926 50S ribosome-binding GTPase 235 352 1.4E-22 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AY555_RS00565 2adab5f8d4944fb216e3800a95a9b376 500 Pfam PF01926 50S ribosome-binding GTPase 5 120 9.1E-27 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AY555_RS00565 2adab5f8d4944fb216e3800a95a9b376 500 SUPERFAMILY SSF52540 138 167 2.8E-59 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS00565 2adab5f8d4944fb216e3800a95a9b376 500 SUPERFAMILY SSF52540 230 497 2.8E-59 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS00565 2adab5f8d4944fb216e3800a95a9b376 500 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 490 7.7E-164 T 14-09-2016 IPR016484 GTP-binding protein EngA GO:0005525 AY555_RS05680 3ffec7252c16a11a48a5d4a6793863f8 322 PIRSF PIRSF006621 1 322 4.3E-68 T 14-09-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AY555_RS05680 3ffec7252c16a11a48a5d4a6793863f8 322 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 315 43.757 T 14-09-2016 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 AY555_RS05680 3ffec7252c16a11a48a5d4a6793863f8 322 Pfam PF01207 Dihydrouridine synthase (Dus) 4 258 7.5E-68 T 14-09-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AY555_RS05680 3ffec7252c16a11a48a5d4a6793863f8 322 SUPERFAMILY SSF51395 1 273 1.46E-63 T 14-09-2016 AY555_RS05680 3ffec7252c16a11a48a5d4a6793863f8 322 Gene3D G3DSA:3.20.20.70 2 238 5.8E-60 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS05680 3ffec7252c16a11a48a5d4a6793863f8 322 PANTHER PTHR11082:SF26 1 314 4.5E-115 T 14-09-2016 AY555_RS05680 3ffec7252c16a11a48a5d4a6793863f8 322 PANTHER PTHR11082 1 314 4.5E-115 T 14-09-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AY555_RS05680 3ffec7252c16a11a48a5d4a6793863f8 322 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 14-09-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AY555_RS05885 31c4d795b6b3fe40ff704d353c816706 338 Pfam PF02618 YceG-like family 46 323 1.7E-76 T 14-09-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like AY555_RS05885 31c4d795b6b3fe40ff704d353c816706 338 PANTHER PTHR30518 17 336 1.1E-75 T 14-09-2016 AY555_RS05885 31c4d795b6b3fe40ff704d353c816706 338 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 150 327 6.4E-55 T 14-09-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like AY555_RS05885 31c4d795b6b3fe40ff704d353c816706 338 Gene3D G3DSA:3.30.160.60 298 332 3.4E-19 T 14-09-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 AY555_RS05885 31c4d795b6b3fe40ff704d353c816706 338 PANTHER PTHR30518:SF2 17 336 1.1E-75 T 14-09-2016 AY555_RS03175 abdd0fe0bede4c2f927ccb3b8ac24cdb 556 Gene3D G3DSA:3.30.750.24 456 543 1.1E-13 T 14-09-2016 IPR002645 STAS domain AY555_RS03175 abdd0fe0bede4c2f927ccb3b8ac24cdb 556 PANTHER PTHR11814:SF112 24 551 3.5E-210 T 14-09-2016 AY555_RS03175 abdd0fe0bede4c2f927ccb3b8ac24cdb 556 SUPERFAMILY SSF52091 457 543 4.12E-13 T 14-09-2016 IPR002645 STAS domain AY555_RS03175 abdd0fe0bede4c2f927ccb3b8ac24cdb 556 PANTHER PTHR11814 24 551 3.5E-210 T 14-09-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 AY555_RS03175 abdd0fe0bede4c2f927ccb3b8ac24cdb 556 Pfam PF01740 STAS domain 456 542 7.3E-13 T 14-09-2016 IPR002645 STAS domain AY555_RS03175 abdd0fe0bede4c2f927ccb3b8ac24cdb 556 Pfam PF00916 Sulfate permease family 29 392 1.8E-77 T 14-09-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AY555_RS06010 5795b894b76cc21021466bf454122c09 224 PRINTS PR00313 NodO calcium binding signature 87 95 1.5E-10 T 14-09-2016 AY555_RS06010 5795b894b76cc21021466bf454122c09 224 PRINTS PR00313 NodO calcium binding signature 96 104 1.5E-10 T 14-09-2016 AY555_RS06010 5795b894b76cc21021466bf454122c09 224 PRINTS PR00313 NodO calcium binding signature 75 86 1.5E-10 T 14-09-2016 AY555_RS06010 5795b894b76cc21021466bf454122c09 224 PRINTS PR00313 NodO calcium binding signature 105 114 1.5E-10 T 14-09-2016 AY555_RS06010 5795b894b76cc21021466bf454122c09 224 Gene3D G3DSA:2.150.10.10 6 142 8.3E-25 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS06010 5795b894b76cc21021466bf454122c09 224 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 92 110 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS06010 5795b894b76cc21021466bf454122c09 224 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 78 94 2.8E-4 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS06010 5795b894b76cc21021466bf454122c09 224 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 59 76 1.7 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS06010 5795b894b76cc21021466bf454122c09 224 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 95 111 0.0013 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS06010 5795b894b76cc21021466bf454122c09 224 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 83 101 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS06010 5795b894b76cc21021466bf454122c09 224 SUPERFAMILY SSF51120 5 138 4.58E-26 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS06010 5795b894b76cc21021466bf454122c09 224 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 74 92 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS08305 0f54e7d0580aff70dd043813cf8ece8c 232 Pfam PF13419 Haloacid dehalogenase-like hydrolase 16 188 3.6E-28 T 14-09-2016 IPR023214 HAD-like domain AY555_RS08305 0f54e7d0580aff70dd043813cf8ece8c 232 Gene3D G3DSA:1.10.150.240 32 84 9.7E-4 T 14-09-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 AY555_RS08305 0f54e7d0580aff70dd043813cf8ece8c 232 Gene3D G3DSA:3.40.50.1000 6 31 8.4E-29 T 14-09-2016 IPR023214 HAD-like domain AY555_RS08305 0f54e7d0580aff70dd043813cf8ece8c 232 Gene3D G3DSA:3.40.50.1000 86 221 8.4E-29 T 14-09-2016 IPR023214 HAD-like domain AY555_RS08305 0f54e7d0580aff70dd043813cf8ece8c 232 SUPERFAMILY SSF56784 12 221 5.56E-41 T 14-09-2016 IPR023214 HAD-like domain AY555_RS08305 0f54e7d0580aff70dd043813cf8ece8c 232 PANTHER PTHR18901 11 187 1.8E-29 T 14-09-2016 AY555_RS05530 9073cbce8b143d8e6753d8f03dfe9ade 403 SUPERFAMILY SSF53756 11 401 1.97E-17 T 14-09-2016 AY555_RS00120 2e2a1b16b229a5d3ed81611eb1f0a60b 129 SMART SM00448 7 122 1.2E-33 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS00120 2e2a1b16b229a5d3ed81611eb1f0a60b 129 SUPERFAMILY SSF52172 5 126 5.83E-34 T 14-09-2016 IPR011006 CheY-like superfamily AY555_RS00120 2e2a1b16b229a5d3ed81611eb1f0a60b 129 PANTHER PTHR26402 7 126 1.0E-37 T 14-09-2016 AY555_RS00120 2e2a1b16b229a5d3ed81611eb1f0a60b 129 Pfam PF00072 Response regulator receiver domain 9 121 1.1E-27 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS00120 2e2a1b16b229a5d3ed81611eb1f0a60b 129 Gene3D G3DSA:3.40.50.2300 5 126 1.0E-35 T 14-09-2016 AY555_RS06360 ce9511b2930813152fd4d91597c0db85 488 PANTHER PTHR11709 75 487 1.8E-55 T 14-09-2016 AY555_RS06360 ce9511b2930813152fd4d91597c0db85 488 Pfam PF07732 Multicopper oxidase 73 164 6.0E-29 T 14-09-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 AY555_RS06360 ce9511b2930813152fd4d91597c0db85 488 PANTHER PTHR11709:SF33 75 487 1.8E-55 T 14-09-2016 AY555_RS06360 ce9511b2930813152fd4d91597c0db85 488 Gene3D G3DSA:2.60.40.420 324 487 1.8E-35 T 14-09-2016 IPR008972 Cupredoxin AY555_RS06360 ce9511b2930813152fd4d91597c0db85 488 Pfam PF07731 Multicopper oxidase 397 487 9.2E-21 T 14-09-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 AY555_RS06360 ce9511b2930813152fd4d91597c0db85 488 SUPERFAMILY SSF49503 168 289 1.6E-12 T 14-09-2016 IPR008972 Cupredoxin AY555_RS06360 ce9511b2930813152fd4d91597c0db85 488 SUPERFAMILY SSF49503 319 486 8.4E-27 T 14-09-2016 IPR008972 Cupredoxin AY555_RS06360 ce9511b2930813152fd4d91597c0db85 488 ProSitePatterns PS00080 Multicopper oxidases signature 2. 469 480 - T 14-09-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 AY555_RS06360 ce9511b2930813152fd4d91597c0db85 488 Gene3D G3DSA:2.60.40.420 165 303 2.6E-19 T 14-09-2016 IPR008972 Cupredoxin AY555_RS06360 ce9511b2930813152fd4d91597c0db85 488 Gene3D G3DSA:2.60.40.420 51 164 6.6E-27 T 14-09-2016 IPR008972 Cupredoxin AY555_RS06360 ce9511b2930813152fd4d91597c0db85 488 SUPERFAMILY SSF49503 73 187 3.51E-29 T 14-09-2016 IPR008972 Cupredoxin AY555_RS00560 5244d457a942bfb6b8f0c80b8e2363cd 449 Gene3D G3DSA:2.140.10.10 68 448 2.0E-70 T 14-09-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain AY555_RS00560 5244d457a942bfb6b8f0c80b8e2363cd 449 Gene3D G3DSA:2.140.10.10 13 27 2.0E-70 T 14-09-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain AY555_RS00560 5244d457a942bfb6b8f0c80b8e2363cd 449 Pfam PF13360 PQQ-like domain 132 368 2.5E-54 T 14-09-2016 IPR002372 Pyrrolo-quinoline quinone repeat AY555_RS00560 5244d457a942bfb6b8f0c80b8e2363cd 449 PANTHER PTHR34512 95 448 5.1E-22 T 14-09-2016 AY555_RS00560 5244d457a942bfb6b8f0c80b8e2363cd 449 SMART SM00564 250 281 410.0 T 14-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AY555_RS00560 5244d457a942bfb6b8f0c80b8e2363cd 449 SMART SM00564 164 196 46.0 T 14-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AY555_RS00560 5244d457a942bfb6b8f0c80b8e2363cd 449 SMART SM00564 339 370 33.0 T 14-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AY555_RS00560 5244d457a942bfb6b8f0c80b8e2363cd 449 SMART SM00564 118 149 0.7 T 14-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AY555_RS00560 5244d457a942bfb6b8f0c80b8e2363cd 449 SMART SM00564 205 236 0.029 T 14-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AY555_RS00560 5244d457a942bfb6b8f0c80b8e2363cd 449 SMART SM00564 301 332 17.0 T 14-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AY555_RS00560 5244d457a942bfb6b8f0c80b8e2363cd 449 PANTHER PTHR34512:SF1 95 448 5.1E-22 T 14-09-2016 AY555_RS00560 5244d457a942bfb6b8f0c80b8e2363cd 449 SUPERFAMILY SSF50998 66 440 7.06E-75 T 14-09-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AY555_RS07820 823bc47c60be96122013b51033431568 267 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 176 261 8.0E-22 T 14-09-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 AY555_RS07820 823bc47c60be96122013b51033431568 267 Gene3D G3DSA:1.20.1180.10 193 262 6.6E-16 T 14-09-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 AY555_RS07820 823bc47c60be96122013b51033431568 267 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 4 261 9.0E-97 T 14-09-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 AY555_RS07820 823bc47c60be96122013b51033431568 267 PANTHER PTHR23416 1 253 3.6E-108 T 14-09-2016 AY555_RS07820 823bc47c60be96122013b51033431568 267 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 262 42.512 T 14-09-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 AY555_RS07820 823bc47c60be96122013b51033431568 267 PANTHER PTHR23416:SF8 1 253 3.6E-108 T 14-09-2016 AY555_RS07820 823bc47c60be96122013b51033431568 267 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 10 38 - T 14-09-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 AY555_RS07820 823bc47c60be96122013b51033431568 267 Gene3D G3DSA:2.160.10.10 3 189 3.5E-45 T 14-09-2016 AY555_RS07820 823bc47c60be96122013b51033431568 267 SUPERFAMILY SSF51161 3 244 2.75E-67 T 14-09-2016 IPR011004 Trimeric LpxA-like AY555_RS07820 823bc47c60be96122013b51033431568 267 PIRSF PIRSF000456 1 267 2.8E-95 T 14-09-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 AY555_RS07820 823bc47c60be96122013b51033431568 267 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 17 48 3.4E-7 T 14-09-2016 IPR001451 Hexapeptide repeat AY555_RS07820 823bc47c60be96122013b51033431568 267 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 105 139 9.4E-5 T 14-09-2016 IPR001451 Hexapeptide repeat AY555_RS07820 823bc47c60be96122013b51033431568 267 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 149 177 - T 14-09-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 AY555_RS03100 55cb38b0762fbac21826d73240c0ff3a 182 PANTHER PTHR11178 1 181 1.7E-94 T 14-09-2016 AY555_RS03100 55cb38b0762fbac21826d73240c0ff3a 182 Pfam PF01106 NifU-like domain 113 179 3.0E-28 T 14-09-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AY555_RS03100 55cb38b0762fbac21826d73240c0ff3a 182 PIRSF PIRSF036773 1 182 1.1E-73 T 14-09-2016 AY555_RS03100 55cb38b0762fbac21826d73240c0ff3a 182 Gene3D G3DSA:3.30.1370.70 1 91 2.3E-34 T 14-09-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal AY555_RS03100 55cb38b0762fbac21826d73240c0ff3a 182 Pfam PF08712 Scaffold protein Nfu/NifU N terminal 3 89 1.0E-30 T 14-09-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal AY555_RS03100 55cb38b0762fbac21826d73240c0ff3a 182 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 117 181 1.0E-25 T 14-09-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AY555_RS03100 55cb38b0762fbac21826d73240c0ff3a 182 SUPERFAMILY SSF110836 1 91 1.18E-30 T 14-09-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal AY555_RS03100 55cb38b0762fbac21826d73240c0ff3a 182 PANTHER PTHR11178:SF1 1 181 1.7E-94 T 14-09-2016 IPR017065 NFU1 iron-sulfur cluster scaffold homologue GO:0016226 AY555_RS03100 55cb38b0762fbac21826d73240c0ff3a 182 SUPERFAMILY SSF117916 103 181 2.83E-27 T 14-09-2016 AY555_RS03100 55cb38b0762fbac21826d73240c0ff3a 182 SMART SM00932 3 89 1.7E-47 T 14-09-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal AY555_RS02125 4b77689ed012a24cd2992317e5c4294d 117 Pfam PF10056 Uncharacterized conserved protein (DUF2293) 14 92 2.2E-14 T 14-09-2016 IPR018744 Domain of unknown function DUF2293 AY555_RS03440 7203b700dcc074bba1444cf9c5aeb4c4 228 SUPERFAMILY SSF56529 21 225 1.44E-62 T 14-09-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AY555_RS03440 7203b700dcc074bba1444cf9c5aeb4c4 228 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 26 225 2.0E-46 T 14-09-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AY555_RS03440 7203b700dcc074bba1444cf9c5aeb4c4 228 PANTHER PTHR11820 24 228 9.9E-73 T 14-09-2016 AY555_RS03440 7203b700dcc074bba1444cf9c5aeb4c4 228 Gene3D G3DSA:3.90.850.10 22 225 1.6E-67 T 14-09-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AY555_RS03440 7203b700dcc074bba1444cf9c5aeb4c4 228 PANTHER PTHR11820:SF7 24 228 9.9E-73 T 14-09-2016 AY555_RS08815 2d70e8ac317aa5c0670188d002bf51d3 265 PANTHER PTHR10992 140 263 9.5E-25 T 14-09-2016 AY555_RS08815 2d70e8ac317aa5c0670188d002bf51d3 265 PANTHER PTHR10992 1 124 9.5E-25 T 14-09-2016 AY555_RS08815 2d70e8ac317aa5c0670188d002bf51d3 265 Gene3D G3DSA:3.40.50.1820 1 262 5.5E-64 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AY555_RS08815 2d70e8ac317aa5c0670188d002bf51d3 265 SUPERFAMILY SSF53474 2 261 8.47E-37 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AY555_RS08815 2d70e8ac317aa5c0670188d002bf51d3 265 Pfam PF12697 Alpha/beta hydrolase family 14 257 1.2E-15 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AY555_RS09255 e79e95ae799a44efe6b9de82424922c6 164 Pfam PF02470 MlaD protein 36 113 2.7E-19 T 14-09-2016 IPR003399 Mce/MlaD AY555_RS09255 e79e95ae799a44efe6b9de82424922c6 164 PANTHER PTHR33371 1 145 2.8E-26 T 14-09-2016 AY555_RS08765 b436ecd95bb49a82c3c48582bad0c6a1 121 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 24 120 2.3E-41 T 14-09-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 AY555_RS08765 b436ecd95bb49a82c3c48582bad0c6a1 121 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 4 121 20.498 T 14-09-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 AY555_RS08765 b436ecd95bb49a82c3c48582bad0c6a1 121 PANTHER PTHR11058 1 121 1.8E-70 T 14-09-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 AY555_RS08765 b436ecd95bb49a82c3c48582bad0c6a1 121 PANTHER PTHR11058:SF10 1 121 1.8E-70 T 14-09-2016 AY555_RS00840 d5ea13f21db01100171ccdfa77925b13 141 SUPERFAMILY SSF64263 1 119 1.31E-52 T 14-09-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00840 d5ea13f21db01100171ccdfa77925b13 141 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 14-09-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00840 d5ea13f21db01100171ccdfa77925b13 141 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 27.083 T 14-09-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00840 d5ea13f21db01100171ccdfa77925b13 141 PANTHER PTHR14413 1 119 4.7E-69 T 14-09-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00840 d5ea13f21db01100171ccdfa77925b13 141 Pfam PF01196 Ribosomal protein L17 20 116 7.5E-37 T 14-09-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00840 d5ea13f21db01100171ccdfa77925b13 141 Gene3D G3DSA:3.90.1030.10 1 117 3.0E-52 T 14-09-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00840 d5ea13f21db01100171ccdfa77925b13 141 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 1.8E-45 T 14-09-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00840 d5ea13f21db01100171ccdfa77925b13 141 PANTHER PTHR14413:SF5 1 119 4.7E-69 T 14-09-2016 AY555_RS02460 74eda7725835a9125de033f1240f5a4e 299 Pfam PF02687 FtsX-like permease family 179 292 9.8E-8 T 14-09-2016 IPR003838 ABC transporter permease protein domain GO:0016020 AY555_RS00405 27abac402454f43caf0d8056d3055b26 260 Pfam PF13353 4Fe-4S single cluster domain 32 124 1.5E-17 T 14-09-2016 AY555_RS00405 27abac402454f43caf0d8056d3055b26 260 SUPERFAMILY SSF102114 41 231 2.22E-27 T 14-09-2016 AY555_RS00405 27abac402454f43caf0d8056d3055b26 260 PANTHER PTHR30352:SF9 21 259 4.0E-86 T 14-09-2016 AY555_RS00405 27abac402454f43caf0d8056d3055b26 260 Gene3D G3DSA:3.80.30.10 86 260 4.9E-61 T 14-09-2016 AY555_RS00405 27abac402454f43caf0d8056d3055b26 260 ProSitePatterns PS01087 Radical activating enzymes signature. 34 55 - T 14-09-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 AY555_RS00405 27abac402454f43caf0d8056d3055b26 260 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 23 252 3.5E-84 T 14-09-2016 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 AY555_RS00405 27abac402454f43caf0d8056d3055b26 260 Pfam PF04055 Radical SAM superfamily 41 191 6.8E-23 T 14-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AY555_RS00405 27abac402454f43caf0d8056d3055b26 260 PANTHER PTHR30352 21 259 4.0E-86 T 14-09-2016 AY555_RS03035 0a78837851b439d12ea2b4adcdd3f255 587 SUPERFAMILY SSF47831 39 158 1.57E-26 T 14-09-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AY555_RS03035 0a78837851b439d12ea2b4adcdd3f255 587 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 16 578 2.1E-161 T 14-09-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AY555_RS03035 0a78837851b439d12ea2b4adcdd3f255 587 SUPERFAMILY SSF51621 269 559 9.16E-96 T 14-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AY555_RS03035 0a78837851b439d12ea2b4adcdd3f255 587 Gene3D G3DSA:3.20.20.60 273 585 5.8E-98 T 14-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AY555_RS03035 0a78837851b439d12ea2b4adcdd3f255 587 Pfam PF00391 PEP-utilising enzyme, mobile domain 169 242 7.0E-22 T 14-09-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AY555_RS03035 0a78837851b439d12ea2b4adcdd3f255 587 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 482 497 1.6E-25 T 14-09-2016 AY555_RS03035 0a78837851b439d12ea2b4adcdd3f255 587 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 465 480 1.6E-25 T 14-09-2016 AY555_RS03035 0a78837851b439d12ea2b4adcdd3f255 587 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 310 329 1.6E-25 T 14-09-2016 AY555_RS03035 0a78837851b439d12ea2b4adcdd3f255 587 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 518 530 1.6E-25 T 14-09-2016 AY555_RS03035 0a78837851b439d12ea2b4adcdd3f255 587 Gene3D G3DSA:3.50.30.10 149 272 8.2E-39 T 14-09-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AY555_RS03035 0a78837851b439d12ea2b4adcdd3f255 587 SUPERFAMILY SSF52009 142 263 9.94E-34 T 14-09-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AY555_RS03035 0a78837851b439d12ea2b4adcdd3f255 587 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 465 483 - T 14-09-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AY555_RS03035 0a78837851b439d12ea2b4adcdd3f255 587 Pfam PF05524 PEP-utilising enzyme, N-terminal 17 143 1.5E-25 T 14-09-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AY555_RS03035 0a78837851b439d12ea2b4adcdd3f255 587 PIRSF PIRSF000732 12 586 6.2E-197 T 14-09-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 AY555_RS03035 0a78837851b439d12ea2b4adcdd3f255 587 PANTHER PTHR22931 89 568 7.6E-158 T 14-09-2016 AY555_RS03035 0a78837851b439d12ea2b4adcdd3f255 587 Gene3D G3DSA:1.10.274.10 41 148 7.0E-32 T 14-09-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AY555_RS03035 0a78837851b439d12ea2b4adcdd3f255 587 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 270 558 2.5E-96 T 14-09-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AY555_RS03035 0a78837851b439d12ea2b4adcdd3f255 587 PANTHER PTHR22931:SF28 89 568 7.6E-158 T 14-09-2016 AY555_RS09680 d21c413eac03880ef49f9c080b605afd 453 Pfam PF01979 Amidohydrolase family 55 421 6.6E-26 T 14-09-2016 IPR006680 Amidohydrolase-related GO:0016787 AY555_RS09680 d21c413eac03880ef49f9c080b605afd 453 PANTHER PTHR11647 9 440 1.3E-130 T 14-09-2016 AY555_RS09680 d21c413eac03880ef49f9c080b605afd 453 ProSitePatterns PS00483 Dihydroorotase signature 2. 306 317 - T 14-09-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 AY555_RS09680 d21c413eac03880ef49f9c080b605afd 453 SUPERFAMILY SSF51556 59 371 6.13E-95 T 14-09-2016 IPR032466 Metal-dependent hydrolase AY555_RS09680 d21c413eac03880ef49f9c080b605afd 453 SUPERFAMILY SSF51338 370 431 4.74E-30 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AY555_RS09680 d21c413eac03880ef49f9c080b605afd 453 SUPERFAMILY SSF51338 8 58 4.74E-30 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AY555_RS09680 d21c413eac03880ef49f9c080b605afd 453 Gene3D G3DSA:2.30.40.10 9 72 1.5E-17 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AY555_RS09680 d21c413eac03880ef49f9c080b605afd 453 Gene3D G3DSA:3.20.20.140 73 409 7.3E-99 T 14-09-2016 AY555_RS09680 d21c413eac03880ef49f9c080b605afd 453 PANTHER PTHR11647:SF1 9 440 1.3E-130 T 14-09-2016 AY555_RS09680 d21c413eac03880ef49f9c080b605afd 453 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 26 427 6.8E-95 T 14-09-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 AY555_RS05580 8db777f6907fdf4b9db0a21dba360bea 292 Pfam PF01063 Amino-transferase class IV 40 261 3.7E-39 T 14-09-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 AY555_RS05580 8db777f6907fdf4b9db0a21dba360bea 292 ProSitePatterns PS00770 Aminotransferases class-IV signature. 188 217 - T 14-09-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 AY555_RS05580 8db777f6907fdf4b9db0a21dba360bea 292 Gene3D G3DSA:3.30.470.10 13 118 6.0E-15 T 14-09-2016 AY555_RS05580 8db777f6907fdf4b9db0a21dba360bea 292 Gene3D G3DSA:3.20.10.10 129 283 5.5E-40 T 14-09-2016 AY555_RS05580 8db777f6907fdf4b9db0a21dba360bea 292 SUPERFAMILY SSF56752 12 286 5.76E-65 T 14-09-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 AY555_RS05580 8db777f6907fdf4b9db0a21dba360bea 292 PANTHER PTHR11825 12 282 1.5E-40 T 14-09-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 AY555_RS07660 e23feeae6d0609d9ba63bf200f33dc7c 313 SUPERFAMILY SSF53822 28 284 1.38E-16 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AY555_RS07660 e23feeae6d0609d9ba63bf200f33dc7c 313 Gene3D G3DSA:3.40.50.2300 148 278 1.9E-42 T 14-09-2016 AY555_RS07660 e23feeae6d0609d9ba63bf200f33dc7c 313 PANTHER PTHR35271 1 313 2.3E-63 T 14-09-2016 AY555_RS07660 e23feeae6d0609d9ba63bf200f33dc7c 313 Gene3D G3DSA:3.40.50.2300 22 147 8.2E-43 T 14-09-2016 AY555_RS07660 e23feeae6d0609d9ba63bf200f33dc7c 313 Pfam PF04392 ABC transporter substrate binding protein 22 311 6.0E-91 T 14-09-2016 IPR007487 ABC transporter, substrate-binding protein AY555_RS09075 de018a41d4dd49c77effafade4eb5fc1 246 SUPERFAMILY SSF53474 11 227 2.01E-38 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AY555_RS09075 de018a41d4dd49c77effafade4eb5fc1 246 Gene3D G3DSA:3.40.50.1820 5 228 5.2E-42 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AY555_RS09075 de018a41d4dd49c77effafade4eb5fc1 246 PANTHER PTHR10655 17 227 2.0E-38 T 14-09-2016 AY555_RS09075 de018a41d4dd49c77effafade4eb5fc1 246 Pfam PF02230 Phospholipase/Carboxylesterase 14 227 2.7E-36 T 14-09-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 AY555_RS02630 3171e223bd3b91ce7aabd9dc9ea5409c 621 PIRSF PIRSF001589 1 619 9.6E-135 T 14-09-2016 AY555_RS02630 3171e223bd3b91ce7aabd9dc9ea5409c 621 SUPERFAMILY SSF52402 462 593 8.82E-59 T 14-09-2016 AY555_RS02630 3171e223bd3b91ce7aabd9dc9ea5409c 621 SUPERFAMILY SSF52402 237 381 8.82E-59 T 14-09-2016 AY555_RS02630 3171e223bd3b91ce7aabd9dc9ea5409c 621 PANTHER PTHR11772 459 587 4.8E-132 T 14-09-2016 AY555_RS02630 3171e223bd3b91ce7aabd9dc9ea5409c 621 PANTHER PTHR11772:SF10 2 383 4.8E-132 T 14-09-2016 AY555_RS02630 3171e223bd3b91ce7aabd9dc9ea5409c 621 PANTHER PTHR11772:SF10 459 587 4.8E-132 T 14-09-2016 AY555_RS02630 3171e223bd3b91ce7aabd9dc9ea5409c 621 Gene3D G3DSA:3.40.50.620 458 610 3.7E-62 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS02630 3171e223bd3b91ce7aabd9dc9ea5409c 621 Gene3D G3DSA:3.40.50.620 228 377 3.7E-62 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS02630 3171e223bd3b91ce7aabd9dc9ea5409c 621 Pfam PF13537 Glutamine amidotransferase domain 50 169 7.0E-45 T 14-09-2016 IPR017932 Glutamine amidotransferase type 2 domain AY555_RS02630 3171e223bd3b91ce7aabd9dc9ea5409c 621 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 546 6.2E-126 T 14-09-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 AY555_RS02630 3171e223bd3b91ce7aabd9dc9ea5409c 621 SUPERFAMILY SSF56235 1 227 4.72E-63 T 14-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AY555_RS02630 3171e223bd3b91ce7aabd9dc9ea5409c 621 Gene3D G3DSA:3.60.20.10 1 227 1.7E-72 T 14-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AY555_RS02630 3171e223bd3b91ce7aabd9dc9ea5409c 621 PANTHER PTHR11772 2 383 4.8E-132 T 14-09-2016 AY555_RS02630 3171e223bd3b91ce7aabd9dc9ea5409c 621 Pfam PF00733 Asparagine synthase 241 610 5.3E-72 T 14-09-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 AY555_RS02045 dde2f55800fd88798cbb0de388f3e23d 208 SUPERFAMILY SSF109604 14 203 2.15E-49 T 14-09-2016 AY555_RS02045 dde2f55800fd88798cbb0de388f3e23d 208 Gene3D G3DSA:1.10.3210.10 13 206 3.4E-56 T 14-09-2016 IPR006674 HD domain AY555_RS05265 f9341ff38dec82e6fc2249fc0406f8c3 67 PANTHER PTHR41532 2 52 3.6E-15 T 14-09-2016 AY555_RS05265 f9341ff38dec82e6fc2249fc0406f8c3 67 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 3.0E-22 T 14-09-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type AY555_RS05265 f9341ff38dec82e6fc2249fc0406f8c3 67 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 47 2.2E-23 T 14-09-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type AY555_RS01710 05d631322c67a4fad1774d3a1e4fd3ac 243 Gene3D G3DSA:1.10.287.500 40 85 4.3E-5 T 14-09-2016 AY555_RS01710 05d631322c67a4fad1774d3a1e4fd3ac 243 Gene3D G3DSA:1.10.287.500 99 136 2.9E-10 T 14-09-2016 AY555_RS01710 05d631322c67a4fad1774d3a1e4fd3ac 243 SUPERFAMILY SSF75708 12 181 2.75E-36 T 14-09-2016 AY555_RS01710 05d631322c67a4fad1774d3a1e4fd3ac 243 Pfam PF04344 Chemotaxis phosphatase, CheZ 102 180 6.8E-8 T 14-09-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- AY555_RS08130 cb8f1bfc8cbf111af03524819e951136 337 PANTHER PTHR11458 7 337 4.3E-170 T 14-09-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AY555_RS08130 cb8f1bfc8cbf111af03524819e951136 337 SUPERFAMILY SSF51569 9 334 1.76E-137 T 14-09-2016 AY555_RS08130 cb8f1bfc8cbf111af03524819e951136 337 Gene3D G3DSA:3.20.20.70 10 334 1.0E-144 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS08130 cb8f1bfc8cbf111af03524819e951136 337 PIRSF PIRSF001415 4 336 6.6E-145 T 14-09-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AY555_RS08130 cb8f1bfc8cbf111af03524819e951136 337 Pfam PF00490 Delta-aminolevulinic acid dehydratase 14 331 3.6E-138 T 14-09-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AY555_RS08130 cb8f1bfc8cbf111af03524819e951136 337 SMART SM01004 10 333 1.3E-223 T 14-09-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AY555_RS08130 cb8f1bfc8cbf111af03524819e951136 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 3.2E-55 T 14-09-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AY555_RS08130 cb8f1bfc8cbf111af03524819e951136 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 130 144 3.2E-55 T 14-09-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AY555_RS08130 cb8f1bfc8cbf111af03524819e951136 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 3.2E-55 T 14-09-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AY555_RS08130 cb8f1bfc8cbf111af03524819e951136 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 3.2E-55 T 14-09-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AY555_RS08130 cb8f1bfc8cbf111af03524819e951136 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 3.2E-55 T 14-09-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AY555_RS08130 cb8f1bfc8cbf111af03524819e951136 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 3.2E-55 T 14-09-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AY555_RS08130 cb8f1bfc8cbf111af03524819e951136 337 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 14-09-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AY555_RS04070 7a0c143af1eb2ca3465d5ba9d2d96bdd 423 Gene3D G3DSA:3.40.50.10300 194 409 2.3E-75 T 14-09-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 AY555_RS04070 7a0c143af1eb2ca3465d5ba9d2d96bdd 423 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 10 405 3.2E-124 T 14-09-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 AY555_RS04070 7a0c143af1eb2ca3465d5ba9d2d96bdd 423 PANTHER PTHR14359 10 409 3.9E-155 T 14-09-2016 AY555_RS04070 7a0c143af1eb2ca3465d5ba9d2d96bdd 423 SUPERFAMILY SSF52507 10 184 4.97E-59 T 14-09-2016 IPR003382 Flavoprotein GO:0003824 AY555_RS04070 7a0c143af1eb2ca3465d5ba9d2d96bdd 423 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 194 380 2.3E-63 T 14-09-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 AY555_RS04070 7a0c143af1eb2ca3465d5ba9d2d96bdd 423 PANTHER PTHR14359:SF20 10 409 3.9E-155 T 14-09-2016 AY555_RS04070 7a0c143af1eb2ca3465d5ba9d2d96bdd 423 Pfam PF02441 Flavoprotein 12 139 4.5E-34 T 14-09-2016 IPR003382 Flavoprotein GO:0003824 AY555_RS04070 7a0c143af1eb2ca3465d5ba9d2d96bdd 423 Gene3D G3DSA:3.40.50.1950 9 186 5.8E-65 T 14-09-2016 IPR003382 Flavoprotein GO:0003824 AY555_RS04070 7a0c143af1eb2ca3465d5ba9d2d96bdd 423 SUPERFAMILY SSF102645 194 409 7.98E-69 T 14-09-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 AY555_RS00050 f9050449b35f2eb27aa8469afc04402e 254 PANTHER PTHR30065 1 251 2.4E-40 T 14-09-2016 AY555_RS00050 f9050449b35f2eb27aa8469afc04402e 254 Pfam PF01311 Bacterial export proteins, family 1 13 245 2.0E-52 T 14-09-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AY555_RS00050 f9050449b35f2eb27aa8469afc04402e 254 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 1.1E-17 T 14-09-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AY555_RS00050 f9050449b35f2eb27aa8469afc04402e 254 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 20 41 1.1E-17 T 14-09-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AY555_RS00050 f9050449b35f2eb27aa8469afc04402e 254 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 1.1E-17 T 14-09-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AY555_RS00050 f9050449b35f2eb27aa8469afc04402e 254 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 1.1E-17 T 14-09-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AY555_RS00050 f9050449b35f2eb27aa8469afc04402e 254 PANTHER PTHR30065:SF1 1 251 2.4E-40 T 14-09-2016 AY555_RS09305 ad79e26a35f8b33b734e8d2ed129b1fa 659 TIGRFAM TIGR00232 tktlase_bact: transketolase 8 657 4.4E-250 T 14-09-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 AY555_RS09305 ad79e26a35f8b33b734e8d2ed129b1fa 659 PANTHER PTHR11624:SF1 333 659 0.0 T 14-09-2016 AY555_RS09305 ad79e26a35f8b33b734e8d2ed129b1fa 659 PANTHER PTHR11624:SF1 2 309 0.0 T 14-09-2016 AY555_RS09305 ad79e26a35f8b33b734e8d2ed129b1fa 659 Pfam PF02779 Transketolase, pyrimidine binding domain 350 521 5.3E-47 T 14-09-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AY555_RS09305 ad79e26a35f8b33b734e8d2ed129b1fa 659 Gene3D G3DSA:3.40.50.920 534 658 2.1E-45 T 14-09-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AY555_RS09305 ad79e26a35f8b33b734e8d2ed129b1fa 659 SMART SM00861 351 522 1.3E-70 T 14-09-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AY555_RS09305 ad79e26a35f8b33b734e8d2ed129b1fa 659 SUPERFAMILY SSF52518 6 314 2.27E-109 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AY555_RS09305 ad79e26a35f8b33b734e8d2ed129b1fa 659 Gene3D G3DSA:3.40.50.970 325 527 1.1E-77 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AY555_RS09305 ad79e26a35f8b33b734e8d2ed129b1fa 659 SUPERFAMILY SSF52922 529 658 1.83E-40 T 14-09-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AY555_RS09305 ad79e26a35f8b33b734e8d2ed129b1fa 659 PANTHER PTHR11624 333 659 0.0 T 14-09-2016 IPR033247 Transketolase family AY555_RS09305 ad79e26a35f8b33b734e8d2ed129b1fa 659 PANTHER PTHR11624 2 309 0.0 T 14-09-2016 IPR033247 Transketolase family AY555_RS09305 ad79e26a35f8b33b734e8d2ed129b1fa 659 Pfam PF02780 Transketolase, C-terminal domain 547 650 6.4E-15 T 14-09-2016 IPR033248 Transketolase, C-terminal domain AY555_RS09305 ad79e26a35f8b33b734e8d2ed129b1fa 659 SUPERFAMILY SSF52518 340 524 4.98E-70 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AY555_RS09305 ad79e26a35f8b33b734e8d2ed129b1fa 659 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 7 314 2.9E-129 T 14-09-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 AY555_RS09305 ad79e26a35f8b33b734e8d2ed129b1fa 659 ProSitePatterns PS00801 Transketolase signature 1. 14 34 - T 14-09-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 AY555_RS09305 ad79e26a35f8b33b734e8d2ed129b1fa 659 Gene3D G3DSA:3.40.50.970 7 317 1.7E-114 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AY555_RS03245 961e3c7064cf43b73761aef273fb0fc7 460 SUPERFAMILY SSF141868 213 388 1.96E-8 T 14-09-2016 IPR001633 EAL domain AY555_RS03245 961e3c7064cf43b73761aef273fb0fc7 460 Gene3D G3DSA:3.20.20.450 217 330 9.1E-4 T 14-09-2016 IPR001633 EAL domain AY555_RS03245 961e3c7064cf43b73761aef273fb0fc7 460 Pfam PF00563 EAL domain 226 387 8.1E-6 T 14-09-2016 IPR001633 EAL domain AY555_RS07700 168ffbdc0cc2a2909dd87757f9e5e016 203 SUPERFAMILY SSF52507 6 188 1.83E-58 T 14-09-2016 IPR003382 Flavoprotein GO:0003824 AY555_RS07700 168ffbdc0cc2a2909dd87757f9e5e016 203 PANTHER PTHR30108 6 190 1.8E-88 T 14-09-2016 AY555_RS07700 168ffbdc0cc2a2909dd87757f9e5e016 203 Gene3D G3DSA:3.40.50.1950 6 188 7.2E-76 T 14-09-2016 IPR003382 Flavoprotein GO:0003824 AY555_RS07700 168ffbdc0cc2a2909dd87757f9e5e016 203 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 5 188 35.646 T 14-09-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 AY555_RS07700 168ffbdc0cc2a2909dd87757f9e5e016 203 Pfam PF02441 Flavoprotein 6 129 1.1E-24 T 14-09-2016 IPR003382 Flavoprotein GO:0003824 AY555_RS07700 168ffbdc0cc2a2909dd87757f9e5e016 203 PANTHER PTHR30108:SF10 6 190 1.8E-88 T 14-09-2016 AY555_RS07700 168ffbdc0cc2a2909dd87757f9e5e016 203 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 6 186 1.5E-69 T 14-09-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 AY555_RS00125 96f8e77f7dadfcf7905331de6b5babb4 243 Gene3D G3DSA:1.25.60.10 165 228 3.4E-5 T 14-09-2016 AY555_RS00125 96f8e77f7dadfcf7905331de6b5babb4 243 SUPERFAMILY SSF158791 170 227 3.92E-6 T 14-09-2016 AY555_RS03015 9a776fa8bfee72685c8f62cf0a5ac676 144 Pfam PF07475 HPr Serine kinase C-terminal domain 3 77 8.2E-21 T 14-09-2016 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 AY555_RS03015 9a776fa8bfee72685c8f62cf0a5ac676 144 PANTHER PTHR30305 3 77 3.2E-14 T 14-09-2016 AY555_RS03015 9a776fa8bfee72685c8f62cf0a5ac676 144 PANTHER PTHR30305:SF1 3 77 3.2E-14 T 14-09-2016 AY555_RS03015 9a776fa8bfee72685c8f62cf0a5ac676 144 SUPERFAMILY SSF53795 3 89 6.71E-19 T 14-09-2016 AY555_RS03015 9a776fa8bfee72685c8f62cf0a5ac676 144 Gene3D G3DSA:3.40.50.300 3 132 4.0E-35 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS05860 3f0f8de50676d81498e29b325a6c0d6c 155 TIGRFAM TIGR00166 S6: ribosomal protein bS6 2 94 3.1E-21 T 14-09-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 AY555_RS05860 3f0f8de50676d81498e29b325a6c0d6c 155 Gene3D G3DSA:3.30.70.60 1 103 1.3E-33 T 14-09-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AY555_RS05860 3f0f8de50676d81498e29b325a6c0d6c 155 SUPERFAMILY SSF54995 1 103 9.29E-33 T 14-09-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 AY555_RS05860 3f0f8de50676d81498e29b325a6c0d6c 155 PANTHER PTHR21011 1 94 1.9E-24 T 14-09-2016 AY555_RS05860 3f0f8de50676d81498e29b325a6c0d6c 155 Pfam PF01250 Ribosomal protein S6 4 92 9.1E-27 T 14-09-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 AY555_RS05860 3f0f8de50676d81498e29b325a6c0d6c 155 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 20.834 T 14-09-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 AY555_RS07575 cbd45b2a57ed41355ec41efac12dbae6 392 PANTHER PTHR10066:SF73 26 230 4.6E-22 T 14-09-2016 AY555_RS07575 cbd45b2a57ed41355ec41efac12dbae6 392 Gene3D G3DSA:3.20.20.80 28 268 4.8E-28 T 14-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AY555_RS07575 cbd45b2a57ed41355ec41efac12dbae6 392 PANTHER PTHR10066 26 230 4.6E-22 T 14-09-2016 AY555_RS07575 cbd45b2a57ed41355ec41efac12dbae6 392 SUPERFAMILY SSF51445 27 273 2.88E-33 T 14-09-2016 IPR017853 Glycoside hydrolase superfamily AY555_RS07575 cbd45b2a57ed41355ec41efac12dbae6 392 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 38 146 1.6E-6 T 14-09-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AY555_RS06495 246d39f399cda963c639e3c5b72e811c 169 Pfam PF04985 Phage tail tube protein FII 6 168 3.8E-55 T 14-09-2016 IPR006498 Tail tube protein AY555_RS06495 246d39f399cda963c639e3c5b72e811c 169 PANTHER PTHR35861 2 169 8.6E-29 T 14-09-2016 AY555_RS06495 246d39f399cda963c639e3c5b72e811c 169 PANTHER PTHR35861:SF2 2 169 8.6E-29 T 14-09-2016 AY555_RS06495 246d39f399cda963c639e3c5b72e811c 169 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 5 168 7.6E-55 T 14-09-2016 IPR006498 Tail tube protein AY555_RS03505 e8c1ca747edad57cbc5ce8dfdc9f54eb 120 PANTHER PTHR23089 3 110 6.8E-36 T 14-09-2016 IPR001310 Histidine triad (HIT) protein AY555_RS03505 e8c1ca747edad57cbc5ce8dfdc9f54eb 120 SUPERFAMILY SSF54197 1 110 8.66E-31 T 14-09-2016 IPR011146 HIT-like domain GO:0003824 AY555_RS03505 e8c1ca747edad57cbc5ce8dfdc9f54eb 120 Pfam PF01230 HIT domain 14 110 7.0E-26 T 14-09-2016 IPR001310 Histidine triad (HIT) protein AY555_RS03505 e8c1ca747edad57cbc5ce8dfdc9f54eb 120 Gene3D G3DSA:3.30.428.10 2 112 3.7E-31 T 14-09-2016 IPR011146 HIT-like domain GO:0003824 AY555_RS03505 e8c1ca747edad57cbc5ce8dfdc9f54eb 120 PRINTS PR00332 Histidine triad family signature 29 47 1.2E-18 T 14-09-2016 IPR001310 Histidine triad (HIT) protein AY555_RS03505 e8c1ca747edad57cbc5ce8dfdc9f54eb 120 PRINTS PR00332 Histidine triad family signature 98 108 1.2E-18 T 14-09-2016 IPR001310 Histidine triad (HIT) protein AY555_RS03505 e8c1ca747edad57cbc5ce8dfdc9f54eb 120 PRINTS PR00332 Histidine triad family signature 8 24 1.2E-18 T 14-09-2016 IPR001310 Histidine triad (HIT) protein AY555_RS03505 e8c1ca747edad57cbc5ce8dfdc9f54eb 120 ProSitePatterns PS00892 HIT domain signature. 91 109 - T 14-09-2016 IPR019808 Histidine triad, conserved site AY555_RS08435 9701f827dce82326ed0a588176ea9365 197 Pfam PF13384 Homeodomain-like domain 19 56 5.1E-6 T 14-09-2016 AY555_RS08435 9701f827dce82326ed0a588176ea9365 197 SUPERFAMILY SSF88659 22 70 7.48E-6 T 14-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AY555_RS03510 bfcd6b5ad4b19ac67864c5349b2aa517 109 SUPERFAMILY SSF101386 7 96 1.57E-23 T 14-09-2016 AY555_RS03510 bfcd6b5ad4b19ac67864c5349b2aa517 109 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 6 92 19.354 T 14-09-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 AY555_RS03510 bfcd6b5ad4b19ac67864c5349b2aa517 109 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 12 95 2.9E-16 T 14-09-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 AY555_RS03510 bfcd6b5ad4b19ac67864c5349b2aa517 109 PANTHER PTHR21256 7 108 2.5E-39 T 14-09-2016 AY555_RS03510 bfcd6b5ad4b19ac67864c5349b2aa517 109 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 9 91 1.7E-29 T 14-09-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 AY555_RS06305 e5285089ece56bd7b49fa83fdb78478f 451 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 224 238 2.6E-29 T 14-09-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AY555_RS06305 e5285089ece56bd7b49fa83fdb78478f 451 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 372 388 2.6E-29 T 14-09-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AY555_RS06305 e5285089ece56bd7b49fa83fdb78478f 451 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 428 445 2.6E-29 T 14-09-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AY555_RS06305 e5285089ece56bd7b49fa83fdb78478f 451 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 253 263 2.6E-29 T 14-09-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AY555_RS06305 e5285089ece56bd7b49fa83fdb78478f 451 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 322 334 2.6E-29 T 14-09-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AY555_RS06305 e5285089ece56bd7b49fa83fdb78478f 451 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 321 332 - T 14-09-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AY555_RS06305 e5285089ece56bd7b49fa83fdb78478f 451 PANTHER PTHR22807:SF33 133 445 1.6E-92 T 14-09-2016 AY555_RS06305 e5285089ece56bd7b49fa83fdb78478f 451 Gene3D G3DSA:3.30.70.1170 175 232 4.5E-10 T 14-09-2016 AY555_RS06305 e5285089ece56bd7b49fa83fdb78478f 451 Gene3D G3DSA:3.40.50.150 234 445 1.3E-56 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS06305 e5285089ece56bd7b49fa83fdb78478f 451 Pfam PF01189 16S rRNA methyltransferase RsmB/F 246 443 1.9E-45 T 14-09-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AY555_RS06305 e5285089ece56bd7b49fa83fdb78478f 451 PANTHER PTHR22807 133 445 1.6E-92 T 14-09-2016 AY555_RS06305 e5285089ece56bd7b49fa83fdb78478f 451 SUPERFAMILY SSF53335 141 445 1.56E-70 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS09905 4080f82d43921aec8b8fb4ce25fc32c0 306 PANTHER PTHR10859:SF81 19 299 1.3E-120 T 14-09-2016 AY555_RS09905 4080f82d43921aec8b8fb4ce25fc32c0 306 SUPERFAMILY SSF53448 8 233 1.13E-34 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AY555_RS09905 4080f82d43921aec8b8fb4ce25fc32c0 306 Gene3D G3DSA:3.90.550.10 7 116 3.5E-19 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AY555_RS09905 4080f82d43921aec8b8fb4ce25fc32c0 306 Pfam PF00535 Glycosyl transferase family 2 5 150 1.7E-26 T 14-09-2016 IPR001173 Glycosyltransferase 2-like AY555_RS09905 4080f82d43921aec8b8fb4ce25fc32c0 306 PANTHER PTHR10859 19 299 1.3E-120 T 14-09-2016 AY555_RS02685 93d027e0bead8c9694ee5b9a832256a6 271 Gene3D G3DSA:3.40.190.10 38 126 1.2E-13 T 14-09-2016 AY555_RS02685 93d027e0bead8c9694ee5b9a832256a6 271 Gene3D G3DSA:3.40.190.10 235 270 1.2E-13 T 14-09-2016 AY555_RS02685 93d027e0bead8c9694ee5b9a832256a6 271 PANTHER PTHR35936 3 203 4.4E-32 T 14-09-2016 AY555_RS02685 93d027e0bead8c9694ee5b9a832256a6 271 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 45 270 2.4E-19 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AY555_RS02685 93d027e0bead8c9694ee5b9a832256a6 271 PANTHER PTHR35936:SF1 3 203 4.4E-32 T 14-09-2016 AY555_RS02685 93d027e0bead8c9694ee5b9a832256a6 271 SUPERFAMILY SSF53850 31 271 7.93E-25 T 14-09-2016 AY555_RS02585 a53319b2c5ad01685e2e53bafe2e6b76 149 Gene3D G3DSA:3.40.50.150 1 106 5.3E-17 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS02585 a53319b2c5ad01685e2e53bafe2e6b76 149 SUPERFAMILY SSF53335 1 146 1.4E-18 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS02585 a53319b2c5ad01685e2e53bafe2e6b76 149 Pfam PF13489 Methyltransferase domain 4 79 1.5E-9 T 14-09-2016 AY555_RS01350 a129a84ca15c6f6a7e4f790d47b28ff2 158 Pfam PF00588 SpoU rRNA Methylase family 2 139 1.0E-24 T 14-09-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AY555_RS01350 a129a84ca15c6f6a7e4f790d47b28ff2 158 PIRSF PIRSF029256 1 152 1.4E-50 T 14-09-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AY555_RS01350 a129a84ca15c6f6a7e4f790d47b28ff2 158 SUPERFAMILY SSF75217 2 147 3.2E-33 T 14-09-2016 IPR029028 Alpha/beta knot methyltransferases AY555_RS01350 a129a84ca15c6f6a7e4f790d47b28ff2 158 PANTHER PTHR12029:SF31 1 148 3.3E-43 T 14-09-2016 AY555_RS01350 a129a84ca15c6f6a7e4f790d47b28ff2 158 Gene3D G3DSA:3.40.1280.10 2 148 5.0E-42 T 14-09-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AY555_RS01350 a129a84ca15c6f6a7e4f790d47b28ff2 158 PANTHER PTHR12029 1 148 3.3E-43 T 14-09-2016 AY555_RS01350 a129a84ca15c6f6a7e4f790d47b28ff2 158 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 1 150 27.849 T 14-09-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AY555_RS09695 cca238dad52fe227ebf55239bb4edfdd 255 PANTHER PTHR10859 4 106 3.7E-15 T 14-09-2016 AY555_RS09695 cca238dad52fe227ebf55239bb4edfdd 255 SUPERFAMILY SSF53448 1 140 1.78E-20 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AY555_RS09695 cca238dad52fe227ebf55239bb4edfdd 255 Pfam PF00535 Glycosyl transferase family 2 8 91 2.6E-11 T 14-09-2016 IPR001173 Glycosyltransferase 2-like AY555_RS09695 cca238dad52fe227ebf55239bb4edfdd 255 Gene3D G3DSA:3.90.550.10 2 100 1.2E-12 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AY555_RS09880 f9fea7af5bec1fd29cb2782c9492282e 506 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 14-09-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 AY555_RS09880 f9fea7af5bec1fd29cb2782c9492282e 506 Pfam PF00474 Sodium:solute symporter family 35 437 4.6E-126 T 14-09-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AY555_RS09880 f9fea7af5bec1fd29cb2782c9492282e 506 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 437 4.1E-111 T 14-09-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AY555_RS09880 f9fea7af5bec1fd29cb2782c9492282e 506 PANTHER PTHR11819:SF148 4 476 7.6E-177 T 14-09-2016 AY555_RS09880 f9fea7af5bec1fd29cb2782c9492282e 506 PANTHER PTHR11819 4 476 7.6E-177 T 14-09-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AY555_RS09880 f9fea7af5bec1fd29cb2782c9492282e 506 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 7 498 3.6E-207 T 14-09-2016 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 AY555_RS03125 dd5383d8ba1b1fb0ee0684a08a873d37 517 PIRSF PIRSF002869 1 512 3.0E-154 T 14-09-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AY555_RS03125 dd5383d8ba1b1fb0ee0684a08a873d37 517 PANTHER PTHR11206:SF90 215 443 1.0E-62 T 14-09-2016 AY555_RS03125 dd5383d8ba1b1fb0ee0684a08a873d37 517 PANTHER PTHR11206:SF90 501 512 1.0E-62 T 14-09-2016 AY555_RS03125 dd5383d8ba1b1fb0ee0684a08a873d37 517 PANTHER PTHR11206:SF90 73 85 1.0E-62 T 14-09-2016 AY555_RS03125 dd5383d8ba1b1fb0ee0684a08a873d37 517 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 3 497 5.4E-127 T 14-09-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AY555_RS03125 dd5383d8ba1b1fb0ee0684a08a873d37 517 PRINTS PR01806 Virulence factor MviN signature 33 52 2.5E-70 T 14-09-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AY555_RS03125 dd5383d8ba1b1fb0ee0684a08a873d37 517 PRINTS PR01806 Virulence factor MviN signature 157 178 2.5E-70 T 14-09-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AY555_RS03125 dd5383d8ba1b1fb0ee0684a08a873d37 517 PRINTS PR01806 Virulence factor MviN signature 133 157 2.5E-70 T 14-09-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AY555_RS03125 dd5383d8ba1b1fb0ee0684a08a873d37 517 PRINTS PR01806 Virulence factor MviN signature 52 68 2.5E-70 T 14-09-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AY555_RS03125 dd5383d8ba1b1fb0ee0684a08a873d37 517 PRINTS PR01806 Virulence factor MviN signature 409 426 2.5E-70 T 14-09-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AY555_RS03125 dd5383d8ba1b1fb0ee0684a08a873d37 517 PRINTS PR01806 Virulence factor MviN signature 357 376 2.5E-70 T 14-09-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AY555_RS03125 dd5383d8ba1b1fb0ee0684a08a873d37 517 PRINTS PR01806 Virulence factor MviN signature 259 285 2.5E-70 T 14-09-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AY555_RS03125 dd5383d8ba1b1fb0ee0684a08a873d37 517 Pfam PF03023 MviN-like protein 28 462 8.0E-114 T 14-09-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AY555_RS03125 dd5383d8ba1b1fb0ee0684a08a873d37 517 PANTHER PTHR11206 215 443 1.0E-62 T 14-09-2016 AY555_RS03125 dd5383d8ba1b1fb0ee0684a08a873d37 517 PANTHER PTHR11206 501 512 1.0E-62 T 14-09-2016 AY555_RS03125 dd5383d8ba1b1fb0ee0684a08a873d37 517 PANTHER PTHR11206 73 85 1.0E-62 T 14-09-2016 AY555_RS06300 d3d66017a0677d6afeb7335d4ce88c8d 487 Gene3D G3DSA:3.20.20.70 4 484 2.0E-196 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS06300 d3d66017a0677d6afeb7335d4ce88c8d 487 SMART SM00116 156 204 0.014 T 14-09-2016 IPR000644 CBS domain AY555_RS06300 d3d66017a0677d6afeb7335d4ce88c8d 487 SMART SM00116 94 143 1.9E-12 T 14-09-2016 IPR000644 CBS domain AY555_RS06300 d3d66017a0677d6afeb7335d4ce88c8d 487 PIRSF PIRSF000130 1 487 1.8E-201 T 14-09-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 AY555_RS06300 d3d66017a0677d6afeb7335d4ce88c8d 487 SUPERFAMILY SSF51412 215 476 6.02E-122 T 14-09-2016 AY555_RS06300 d3d66017a0677d6afeb7335d4ce88c8d 487 SUPERFAMILY SSF51412 3 88 6.02E-122 T 14-09-2016 AY555_RS06300 d3d66017a0677d6afeb7335d4ce88c8d 487 PANTHER PTHR11911 298 484 2.7E-229 T 14-09-2016 AY555_RS06300 d3d66017a0677d6afeb7335d4ce88c8d 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 293 305 - T 14-09-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 AY555_RS06300 d3d66017a0677d6afeb7335d4ce88c8d 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 6 485 82.624 T 14-09-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 AY555_RS06300 d3d66017a0677d6afeb7335d4ce88c8d 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 6 453 1.0E-192 T 14-09-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 AY555_RS06300 d3d66017a0677d6afeb7335d4ce88c8d 487 Pfam PF00571 CBS domain 91 139 1.6E-10 T 14-09-2016 IPR000644 CBS domain AY555_RS06300 d3d66017a0677d6afeb7335d4ce88c8d 487 Pfam PF00571 CBS domain 148 199 7.0E-4 T 14-09-2016 IPR000644 CBS domain AY555_RS06300 d3d66017a0677d6afeb7335d4ce88c8d 487 PANTHER PTHR11911:SF6 298 484 2.7E-229 T 14-09-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 AY555_RS06300 d3d66017a0677d6afeb7335d4ce88c8d 487 SUPERFAMILY SSF54631 91 202 4.93E-29 T 14-09-2016 AY555_RS06300 d3d66017a0677d6afeb7335d4ce88c8d 487 PANTHER PTHR11911 1 280 2.7E-229 T 14-09-2016 AY555_RS06300 d3d66017a0677d6afeb7335d4ce88c8d 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 6 472 1.0E-157 T 14-09-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 AY555_RS06300 d3d66017a0677d6afeb7335d4ce88c8d 487 SMART SM01240 5 472 0.0 T 14-09-2016 AY555_RS06300 d3d66017a0677d6afeb7335d4ce88c8d 487 PANTHER PTHR11911:SF6 1 280 2.7E-229 T 14-09-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 AY555_RS07565 979e95cfd8cbc5272a765509d5a051c8 157 SUPERFAMILY SSF55298 6 155 1.45E-55 T 14-09-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AY555_RS07565 979e95cfd8cbc5272a765509d5a051c8 157 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 10 149 1.8E-44 T 14-09-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AY555_RS07565 979e95cfd8cbc5272a765509d5a051c8 157 PANTHER PTHR11803:SF2 10 155 8.1E-46 T 14-09-2016 AY555_RS07565 979e95cfd8cbc5272a765509d5a051c8 157 PANTHER PTHR11803 10 155 8.1E-46 T 14-09-2016 IPR006175 YjgF/YER057c/UK114 family AY555_RS07565 979e95cfd8cbc5272a765509d5a051c8 157 Gene3D G3DSA:3.30.1330.40 6 155 5.5E-63 T 14-09-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AY555_RS05545 833624fb97c652a157abf6f4430aeb40 236 PANTHER PTHR12677 14 236 6.1E-19 T 14-09-2016 IPR015414 Transmembrane protein TMEM64/TMEM41 GO:0016021 AY555_RS05545 833624fb97c652a157abf6f4430aeb40 236 Pfam PF09335 SNARE associated Golgi protein 84 200 1.5E-22 T 14-09-2016 IPR032816 SNARE associated Golgi protein AY555_RS09455 fde0a0ea3fe0b25db7f0f9e5d5fe1287 128 Gene3D G3DSA:1.20.1300.10 10 120 4.7E-26 T 14-09-2016 AY555_RS09455 fde0a0ea3fe0b25db7f0f9e5d5fe1287 128 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 16 119 1.0E-26 T 14-09-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 AY555_RS09455 fde0a0ea3fe0b25db7f0f9e5d5fe1287 128 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 1 113 2.0E-19 T 14-09-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 AY555_RS09455 fde0a0ea3fe0b25db7f0f9e5d5fe1287 128 SUPERFAMILY SSF81343 11 120 3.43E-28 T 14-09-2016 AY555_RS00075 c0ee81d689d47c307c07a8536129a5f0 95 SUPERFAMILY SSF160544 1 78 2.75E-19 T 14-09-2016 IPR029025 Type III secretion system substrate exporter, C-terminal AY555_RS00075 c0ee81d689d47c307c07a8536129a5f0 95 Pfam PF01312 FlhB HrpN YscU SpaS Family 1 74 2.0E-15 T 14-09-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AY555_RS00075 c0ee81d689d47c307c07a8536129a5f0 95 Gene3D G3DSA:3.40.1690.10 1 77 2.2E-20 T 14-09-2016 IPR029025 Type III secretion system substrate exporter, C-terminal AY555_RS00075 c0ee81d689d47c307c07a8536129a5f0 95 PANTHER PTHR30531 1 88 9.5E-24 T 14-09-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AY555_RS09425 7d7f6e8c2927fff502550d0691d8182b 448 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 24 85 5.6E-4 T 14-09-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AY555_RS09425 7d7f6e8c2927fff502550d0691d8182b 448 Gene3D G3DSA:3.40.50.300 126 407 1.0E-79 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS09425 7d7f6e8c2927fff502550d0691d8182b 448 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 7 437 2.7E-147 T 14-09-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AY555_RS09425 7d7f6e8c2927fff502550d0691d8182b 448 TIGRFAM TIGR03498 FliI_clade3: flagellar protein export ATPase FliI 22 438 2.0E-191 T 14-09-2016 IPR022426 Flagellum-specific ATP synthase FliI, clade 3 GO:0009288|GO:0016887|GO:0030257|GO:0044781 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AY555_RS09425 7d7f6e8c2927fff502550d0691d8182b 448 SUPERFAMILY SSF52540 95 363 1.26E-84 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS09425 7d7f6e8c2927fff502550d0691d8182b 448 PANTHER PTHR15184:SF9 1 437 2.6E-183 T 14-09-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AY555_RS09425 7d7f6e8c2927fff502550d0691d8182b 448 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 148 359 5.9E-72 T 14-09-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AY555_RS09425 7d7f6e8c2927fff502550d0691d8182b 448 SMART SM00382 160 344 3.5E-5 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS09425 7d7f6e8c2927fff502550d0691d8182b 448 PANTHER PTHR15184 1 437 2.6E-183 T 14-09-2016 AY555_RS02530 77e41211dc57e193136f0103622ccf58 450 Gene3D G3DSA:1.25.40.10 126 374 3.0E-10 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS02530 77e41211dc57e193136f0103622ccf58 450 SUPERFAMILY SSF48452 153 279 2.94E-5 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS02530 77e41211dc57e193136f0103622ccf58 450 Pfam PF07219 HemY protein N-terminus 27 133 3.7E-16 T 14-09-2016 IPR010817 HemY, N-terminal UniPathway: UPA00252 AY555_RS08755 02b95cbe4cc22603fbec4d3716a3bb33 215 PANTHER PTHR10884:SF10 9 205 1.9E-107 T 14-09-2016 AY555_RS08755 02b95cbe4cc22603fbec4d3716a3bb33 215 SUPERFAMILY SSF143243 13 193 7.06E-64 T 14-09-2016 AY555_RS08755 02b95cbe4cc22603fbec4d3716a3bb33 215 PANTHER PTHR10884 9 205 1.9E-107 T 14-09-2016 AY555_RS08755 02b95cbe4cc22603fbec4d3716a3bb33 215 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 119 140 - T 14-09-2016 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 AY555_RS08755 02b95cbe4cc22603fbec4d3716a3bb33 215 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 14 166 31.248 T 14-09-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 AY555_RS08755 02b95cbe4cc22603fbec4d3716a3bb33 215 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 37 158 2.9E-48 T 14-09-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 AY555_RS08755 02b95cbe4cc22603fbec4d3716a3bb33 215 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 90 145 2.0E-19 T 14-09-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 AY555_RS08755 02b95cbe4cc22603fbec4d3716a3bb33 215 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 39 159 1.1E-45 T 14-09-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 AY555_RS01095 7f08672d5b4e585a7edabb32471278df 88 SUPERFAMILY SSF64307 5 75 6.28E-18 T 14-09-2016 IPR001455 TusA-like domain AY555_RS01095 7f08672d5b4e585a7edabb32471278df 88 Gene3D G3DSA:3.30.110.40 7 76 1.3E-18 T 14-09-2016 IPR001455 TusA-like domain AY555_RS01095 7f08672d5b4e585a7edabb32471278df 88 PANTHER PTHR33279 8 78 5.1E-13 T 14-09-2016 AY555_RS01095 7f08672d5b4e585a7edabb32471278df 88 Pfam PF01206 Sulfurtransferase TusA 7 75 5.2E-18 T 14-09-2016 IPR001455 TusA-like domain AY555_RS01095 7f08672d5b4e585a7edabb32471278df 88 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 9 33 - T 14-09-2016 IPR001455 TusA-like domain AY555_RS02470 5a84541cc95da456228b3a4bd5e897d7 240 PANTHER PTHR10434 2 233 6.5E-42 T 14-09-2016 AY555_RS02470 5a84541cc95da456228b3a4bd5e897d7 240 Pfam PF01553 Acyltransferase 63 187 3.5E-24 T 14-09-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AY555_RS02470 5a84541cc95da456228b3a4bd5e897d7 240 SMART SM00563 74 190 3.0E-31 T 14-09-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AY555_RS02470 5a84541cc95da456228b3a4bd5e897d7 240 SUPERFAMILY SSF69593 5 232 1.96E-38 T 14-09-2016 AY555_RS02470 5a84541cc95da456228b3a4bd5e897d7 240 PANTHER PTHR10434:SF11 2 233 6.5E-42 T 14-09-2016 AY555_RS02470 5a84541cc95da456228b3a4bd5e897d7 240 Gene3D G3DSA:3.40.1130.10 61 195 8.4E-18 T 14-09-2016 AY555_RS07795 1588ca17a5cf99d7310866bdbe92701c 368 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 137 176 1.5E-7 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AY555_RS07795 1588ca17a5cf99d7310866bdbe92701c 368 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 136 366 3.9E-53 T 14-09-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 AY555_RS07795 1588ca17a5cf99d7310866bdbe92701c 368 Gene3D G3DSA:2.30.42.10 104 204 3.0E-24 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AY555_RS07795 1588ca17a5cf99d7310866bdbe92701c 368 Pfam PF02163 Peptidase family M50 14 353 1.1E-79 T 14-09-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 AY555_RS07795 1588ca17a5cf99d7310866bdbe92701c 368 SUPERFAMILY SSF50156 98 202 1.06E-18 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AY555_RS07795 1588ca17a5cf99d7310866bdbe92701c 368 PANTHER PTHR22939 139 367 3.5E-68 T 14-09-2016 AY555_RS07795 1588ca17a5cf99d7310866bdbe92701c 368 PANTHER PTHR22939:SF78 139 367 3.5E-68 T 14-09-2016 AY555_RS07795 1588ca17a5cf99d7310866bdbe92701c 368 SMART SM00228 125 195 2.0E-8 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AY555_RS00805 d434a8e2d6cb17fe0a6b266b885b3d28 241 SUPERFAMILY SSF160909 8 226 6.02E-64 T 14-09-2016 AY555_RS00805 d434a8e2d6cb17fe0a6b266b885b3d28 241 Pfam PF07542 ATP12 chaperone protein 10 128 1.1E-28 T 14-09-2016 IPR011419 ATP12, ATPase F1F0-assembly protein GO:0043461 AY555_RS00805 d434a8e2d6cb17fe0a6b266b885b3d28 241 Gene3D G3DSA:1.10.3580.10 70 225 5.2E-41 T 14-09-2016 IPR023335 Orthogonal Bundle domain in ATP12 AY555_RS00805 d434a8e2d6cb17fe0a6b266b885b3d28 241 PANTHER PTHR21013 8 213 4.7E-47 T 14-09-2016 IPR011419 ATP12, ATPase F1F0-assembly protein GO:0043461 AY555_RS00805 d434a8e2d6cb17fe0a6b266b885b3d28 241 Gene3D G3DSA:3.30.2180.10 7 66 7.4E-16 T 14-09-2016 AY555_RS06385 8ea9a0e6e4b0d9588c67c15b055cf831 368 PANTHER PTHR30349:SF20 52 360 6.0E-22 T 14-09-2016 AY555_RS06385 8ea9a0e6e4b0d9588c67c15b055cf831 368 SUPERFAMILY SSF56349 60 356 4.12E-33 T 14-09-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AY555_RS06385 8ea9a0e6e4b0d9588c67c15b055cf831 368 Pfam PF00589 Phage integrase family 170 347 1.0E-18 T 14-09-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AY555_RS06385 8ea9a0e6e4b0d9588c67c15b055cf831 368 PANTHER PTHR30349 52 360 6.0E-22 T 14-09-2016 AY555_RS06385 8ea9a0e6e4b0d9588c67c15b055cf831 368 Gene3D G3DSA:1.10.443.10 167 360 1.2E-26 T 14-09-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AY555_RS06375 bdc508fae3937126089702908b9ad35d 440 Pfam PF00375 Sodium:dicarboxylate symporter family 12 397 3.7E-113 T 14-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AY555_RS06375 bdc508fae3937126089702908b9ad35d 440 Gene3D G3DSA:1.10.3860.10 5 400 3.6E-112 T 14-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AY555_RS06375 bdc508fae3937126089702908b9ad35d 440 SUPERFAMILY SSF118215 12 399 9.55E-104 T 14-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AY555_RS06375 bdc508fae3937126089702908b9ad35d 440 PANTHER PTHR11958 3 408 4.0E-159 T 14-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AY555_RS06375 bdc508fae3937126089702908b9ad35d 440 PRINTS PR00173 Glutamate-aspartate symporter signature 325 344 7.5E-20 T 14-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AY555_RS06375 bdc508fae3937126089702908b9ad35d 440 PRINTS PR00173 Glutamate-aspartate symporter signature 78 103 7.5E-20 T 14-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AY555_RS06375 bdc508fae3937126089702908b9ad35d 440 PRINTS PR00173 Glutamate-aspartate symporter signature 10 30 7.5E-20 T 14-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AY555_RS06375 bdc508fae3937126089702908b9ad35d 440 PRINTS PR00173 Glutamate-aspartate symporter signature 352 372 7.5E-20 T 14-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AY555_RS06375 bdc508fae3937126089702908b9ad35d 440 PRINTS PR00173 Glutamate-aspartate symporter signature 188 207 7.5E-20 T 14-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AY555_RS06375 bdc508fae3937126089702908b9ad35d 440 PRINTS PR00173 Glutamate-aspartate symporter signature 290 316 7.5E-20 T 14-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AY555_RS06375 bdc508fae3937126089702908b9ad35d 440 PANTHER PTHR11958:SF59 3 408 4.0E-159 T 14-09-2016 AY555_RS00230 79c2991df686f58008b2d23d49adc380 370 Pfam PF01555 DNA methylase 34 255 7.6E-56 T 14-09-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 AY555_RS00230 79c2991df686f58008b2d23d49adc380 370 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 37 43 - T 14-09-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AY555_RS00230 79c2991df686f58008b2d23d49adc380 370 PANTHER PTHR13370 17 278 8.3E-51 T 14-09-2016 AY555_RS00230 79c2991df686f58008b2d23d49adc380 370 PANTHER PTHR13370:SF8 17 278 8.3E-51 T 14-09-2016 AY555_RS00230 79c2991df686f58008b2d23d49adc380 370 SUPERFAMILY SSF53335 15 261 1.25E-72 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS00230 79c2991df686f58008b2d23d49adc380 370 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 82 102 5.6E-38 T 14-09-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AY555_RS00230 79c2991df686f58008b2d23d49adc380 370 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 239 259 5.6E-38 T 14-09-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AY555_RS00230 79c2991df686f58008b2d23d49adc380 370 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 216 234 5.6E-38 T 14-09-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AY555_RS00230 79c2991df686f58008b2d23d49adc380 370 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 197 214 5.6E-38 T 14-09-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AY555_RS00230 79c2991df686f58008b2d23d49adc380 370 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 33 47 5.6E-38 T 14-09-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AY555_RS00230 79c2991df686f58008b2d23d49adc380 370 Gene3D G3DSA:3.40.50.150 13 261 9.0E-76 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS08235 c58a0e698a24ebb119dc2827b5924092 143 SMART SM00422 18 87 1.9E-4 T 14-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AY555_RS08235 c58a0e698a24ebb119dc2827b5924092 143 Gene3D G3DSA:1.10.1660.10 18 137 1.9E-16 T 14-09-2016 AY555_RS08235 c58a0e698a24ebb119dc2827b5924092 143 PANTHER PTHR30204 9 84 1.0E-19 T 14-09-2016 AY555_RS08235 c58a0e698a24ebb119dc2827b5924092 143 PANTHER PTHR30204:SF15 9 84 1.0E-19 T 14-09-2016 AY555_RS08235 c58a0e698a24ebb119dc2827b5924092 143 Pfam PF13411 MerR HTH family regulatory protein 18 84 4.7E-23 T 14-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AY555_RS08235 c58a0e698a24ebb119dc2827b5924092 143 SUPERFAMILY SSF46955 18 137 1.51E-16 T 14-09-2016 IPR009061 Putative DNA-binding domain AY555_RS06510 7bf21a6f9db28b7e121384e8cc6d65a9 393 Pfam PF12571 Phage tail-collar fibre protein 5 151 2.0E-55 T 14-09-2016 IPR022225 Phage tail fibre protein AY555_RS06510 7bf21a6f9db28b7e121384e8cc6d65a9 393 PANTHER PTHR35191 1 162 1.4E-46 T 14-09-2016 AY555_RS06510 7bf21a6f9db28b7e121384e8cc6d65a9 393 Gene3D G3DSA:3.90.1340.10 249 314 4.8E-24 T 14-09-2016 IPR011083 Phage tail collar domain AY555_RS06510 7bf21a6f9db28b7e121384e8cc6d65a9 393 Pfam PF07484 Phage Tail Collar Domain 252 309 1.5E-21 T 14-09-2016 IPR011083 Phage tail collar domain AY555_RS06510 7bf21a6f9db28b7e121384e8cc6d65a9 393 SUPERFAMILY SSF88874 249 392 1.44E-42 T 14-09-2016 AY555_RS05215 fe35fbb970ce2b0b128c0be17138ba9b 568 Pfam PF02096 60Kd inner membrane protein 359 556 4.5E-60 T 14-09-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AY555_RS05215 fe35fbb970ce2b0b128c0be17138ba9b 568 PRINTS PR00701 60kDa inner membrane protein signature 77 98 2.2E-18 T 14-09-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AY555_RS05215 fe35fbb970ce2b0b128c0be17138ba9b 568 PRINTS PR00701 60kDa inner membrane protein signature 329 349 2.2E-18 T 14-09-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AY555_RS05215 fe35fbb970ce2b0b128c0be17138ba9b 568 PRINTS PR00701 60kDa inner membrane protein signature 249 264 2.2E-18 T 14-09-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AY555_RS05215 fe35fbb970ce2b0b128c0be17138ba9b 568 PRINTS PR00701 60kDa inner membrane protein signature 420 443 2.2E-18 T 14-09-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AY555_RS05215 fe35fbb970ce2b0b128c0be17138ba9b 568 PANTHER PTHR12428 330 468 1.1E-74 T 14-09-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AY555_RS05215 fe35fbb970ce2b0b128c0be17138ba9b 568 PANTHER PTHR12428:SF14 330 468 1.1E-74 T 14-09-2016 AY555_RS05215 fe35fbb970ce2b0b128c0be17138ba9b 568 Pfam PF14849 YidC periplasmic domain 71 347 1.4E-76 T 14-09-2016 IPR028053 Membrane insertase YidC, N-terminal AY555_RS05215 fe35fbb970ce2b0b128c0be17138ba9b 568 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 358 556 3.5E-71 T 14-09-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal AY555_RS05215 fe35fbb970ce2b0b128c0be17138ba9b 568 PANTHER PTHR12428:SF14 488 556 1.1E-74 T 14-09-2016 AY555_RS05215 fe35fbb970ce2b0b128c0be17138ba9b 568 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 357 4.1E-83 T 14-09-2016 IPR028053 Membrane insertase YidC, N-terminal AY555_RS05215 fe35fbb970ce2b0b128c0be17138ba9b 568 PANTHER PTHR12428 488 556 1.1E-74 T 14-09-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AY555_RS05215 fe35fbb970ce2b0b128c0be17138ba9b 568 PRINTS PR01900 YidC translocation/secretion protein signature 344 360 4.4E-23 T 14-09-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AY555_RS05215 fe35fbb970ce2b0b128c0be17138ba9b 568 PRINTS PR01900 YidC translocation/secretion protein signature 492 507 4.4E-23 T 14-09-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AY555_RS05215 fe35fbb970ce2b0b128c0be17138ba9b 568 PRINTS PR01900 YidC translocation/secretion protein signature 511 535 4.4E-23 T 14-09-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AY555_RS05215 fe35fbb970ce2b0b128c0be17138ba9b 568 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 5 558 22.149 T 14-09-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 AY555_RS08840 597f0b19bab7bed23e5dd6599918b901 198 PANTHER PTHR35458 4 58 2.7E-75 T 14-09-2016 AY555_RS08840 597f0b19bab7bed23e5dd6599918b901 198 PANTHER PTHR35458 76 197 2.7E-75 T 14-09-2016 AY555_RS08840 597f0b19bab7bed23e5dd6599918b901 198 Pfam PF01936 NYN domain 8 183 1.8E-33 T 14-09-2016 IPR021139 NYN domain, limkain-b1-type AY555_RS08840 597f0b19bab7bed23e5dd6599918b901 198 Gene3D G3DSA:3.40.50.1010 4 186 2.9E-40 T 14-09-2016 IPR029060 PIN domain-like AY555_RS08840 597f0b19bab7bed23e5dd6599918b901 198 PANTHER PTHR35458:SF1 4 58 2.7E-75 T 14-09-2016 AY555_RS08840 597f0b19bab7bed23e5dd6599918b901 198 PANTHER PTHR35458:SF1 76 197 2.7E-75 T 14-09-2016 AY555_RS04820 d32057c6c6ffe79c992125e5de66d5c4 186 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 12 180 6.1E-37 T 14-09-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AY555_RS04820 d32057c6c6ffe79c992125e5de66d5c4 186 Hamap MF_01416 ATP synthase subunit delta [atpD]. 7 184 19.589 T 14-09-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AY555_RS04820 d32057c6c6ffe79c992125e5de66d5c4 186 Gene3D G3DSA:1.10.520.20 9 113 1.3E-20 T 14-09-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain AY555_RS04820 d32057c6c6ffe79c992125e5de66d5c4 186 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 144 163 - T 14-09-2016 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 AY555_RS04820 d32057c6c6ffe79c992125e5de66d5c4 186 Pfam PF00213 ATP synthase delta (OSCP) subunit 11 181 7.1E-49 T 14-09-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AY555_RS04820 d32057c6c6ffe79c992125e5de66d5c4 186 PANTHER PTHR11910 10 186 4.7E-55 T 14-09-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AY555_RS04820 d32057c6c6ffe79c992125e5de66d5c4 186 SUPERFAMILY SSF47928 10 112 2.35E-21 T 14-09-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain AY555_RS04820 d32057c6c6ffe79c992125e5de66d5c4 186 PRINTS PR00125 ATP synthase delta subunit signature 81 92 1.1E-25 T 14-09-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AY555_RS04820 d32057c6c6ffe79c992125e5de66d5c4 186 PRINTS PR00125 ATP synthase delta subunit signature 157 175 1.1E-25 T 14-09-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AY555_RS04820 d32057c6c6ffe79c992125e5de66d5c4 186 PRINTS PR00125 ATP synthase delta subunit signature 142 157 1.1E-25 T 14-09-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AY555_RS04820 d32057c6c6ffe79c992125e5de66d5c4 186 PRINTS PR00125 ATP synthase delta subunit signature 92 106 1.1E-25 T 14-09-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AY555_RS04820 d32057c6c6ffe79c992125e5de66d5c4 186 PRINTS PR00125 ATP synthase delta subunit signature 11 30 1.1E-25 T 14-09-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AY555_RS04255 588d0d2419672a34b0c4fd7e2f66b2d3 241 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 46 222 3.9E-16 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS04255 588d0d2419672a34b0c4fd7e2f66b2d3 241 SUPERFAMILY SSF161098 13 215 3.66E-39 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS04255 588d0d2419672a34b0c4fd7e2f66b2d3 241 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 119 3.4E-20 T 14-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AY555_RS04255 588d0d2419672a34b0c4fd7e2f66b2d3 241 PANTHER PTHR30450:SF7 1 231 2.3E-86 T 14-09-2016 AY555_RS04255 588d0d2419672a34b0c4fd7e2f66b2d3 241 PANTHER PTHR30450 1 231 2.3E-86 T 14-09-2016 AY555_RS04255 588d0d2419672a34b0c4fd7e2f66b2d3 241 Gene3D G3DSA:1.10.3720.10 12 224 2.0E-42 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS09860 2c1fdc5b00d9280a43aace79f9acefc3 447 Pfam PF04932 O-Antigen ligase 217 347 6.5E-13 T 14-09-2016 IPR007016 O-antigen ligase-related AY555_RS07195 617cc82aeb9376d620f6f4b51319f385 256 PANTHER PTHR30283 2 253 2.3E-88 T 14-09-2016 AY555_RS07195 617cc82aeb9376d620f6f4b51319f385 256 Pfam PF03883 Protein of unknown function (DUF328) 1 242 9.1E-79 T 14-09-2016 IPR005583 Peroxide stress protein YaaA AY555_RS07195 617cc82aeb9376d620f6f4b51319f385 256 PANTHER PTHR30283:SF3 2 253 2.3E-88 T 14-09-2016 AY555_RS07195 617cc82aeb9376d620f6f4b51319f385 256 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 254 32.734 T 14-09-2016 IPR005583 Peroxide stress protein YaaA AY555_RS09400 77d4fc0f39ab2ae53d34184809659452 302 PANTHER PTHR30572:SF11 53 281 7.1E-48 T 14-09-2016 AY555_RS09400 77d4fc0f39ab2ae53d34184809659452 302 PANTHER PTHR30572 53 281 7.1E-48 T 14-09-2016 AY555_RS09400 77d4fc0f39ab2ae53d34184809659452 302 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 64 269 2.0E-88 T 14-09-2016 IPR014164 TonB-system energizer ExbB type-1 GO:0006810|GO:0016020 AY555_RS09400 77d4fc0f39ab2ae53d34184809659452 302 Pfam PF01618 MotA/TolQ/ExbB proton channel family 153 250 3.3E-33 T 14-09-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AY555_RS03555 216a2e9b9d6c0b05db653f90261f4e51 260 Pfam PF03472 Autoinducer binding domain 48 186 1.1E-22 T 14-09-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AY555_RS03555 216a2e9b9d6c0b05db653f90261f4e51 260 Gene3D G3DSA:1.10.10.10 200 237 1.3E-4 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS03555 216a2e9b9d6c0b05db653f90261f4e51 260 SUPERFAMILY SSF75516 35 178 3.79E-26 T 14-09-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AY555_RS03555 216a2e9b9d6c0b05db653f90261f4e51 260 Gene3D G3DSA:3.30.450.80 38 184 5.4E-25 T 14-09-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AY555_RS03495 c94436498d33416c39bc5c01c06ff04f 381 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 187 381 37.165 T 14-09-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 AY555_RS03495 c94436498d33416c39bc5c01c06ff04f 381 SUPERFAMILY SSF55821 17 182 7.78E-5 T 14-09-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain AY555_RS03495 c94436498d33416c39bc5c01c06ff04f 381 Pfam PF00925 GTP cyclohydrolase II 194 356 9.6E-59 T 14-09-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 AY555_RS03495 c94436498d33416c39bc5c01c06ff04f 381 PANTHER PTHR21327:SF6 136 381 6.9E-85 T 14-09-2016 AY555_RS03495 c94436498d33416c39bc5c01c06ff04f 381 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 205 381 5.1E-64 T 14-09-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 AY555_RS03495 c94436498d33416c39bc5c01c06ff04f 381 SUPERFAMILY SSF142695 192 358 1.29E-56 T 14-09-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 AY555_RS03495 c94436498d33416c39bc5c01c06ff04f 381 PANTHER PTHR21327 136 381 6.9E-85 T 14-09-2016 AY555_RS00625 be283a1b391853d86b0d7c2bc57b549e 306 Gene3D G3DSA:3.40.50.150 34 270 4.0E-32 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS00625 be283a1b391853d86b0d7c2bc57b549e 306 PANTHER PTHR13090 8 292 3.6E-118 T 14-09-2016 AY555_RS00625 be283a1b391853d86b0d7c2bc57b549e 306 SUPERFAMILY SSF53335 36 223 5.58E-29 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS00625 be283a1b391853d86b0d7c2bc57b549e 306 Pfam PF08241 Methyltransferase domain 54 144 1.5E-14 T 14-09-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AY555_RS07705 076f0b4c33f0a959e325f9ba9f50a241 107 Gene3D G3DSA:3.10.50.40 2 106 3.3E-34 T 14-09-2016 AY555_RS07705 076f0b4c33f0a959e325f9ba9f50a241 107 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 47 67 - T 14-09-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site AY555_RS07705 076f0b4c33f0a959e325f9ba9f50a241 107 SUPERFAMILY SSF54534 2 106 2.09E-28 T 14-09-2016 AY555_RS07705 076f0b4c33f0a959e325f9ba9f50a241 107 Pfam PF00639 PPIC-type PPIASE domain 9 106 1.9E-25 T 14-09-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 AY555_RS07705 076f0b4c33f0a959e325f9ba9f50a241 107 PANTHER PTHR10657 1 106 1.6E-36 T 14-09-2016 AY555_RS00615 d287afff5e71b5318cb968c7e3e27efe 250 PANTHER PTHR11907 10 248 2.8E-42 T 14-09-2016 AY555_RS00615 d287afff5e71b5318cb968c7e3e27efe 250 Gene3D G3DSA:3.40.50.2020 79 245 7.1E-33 T 14-09-2016 IPR029057 Phosphoribosyltransferase-like AY555_RS00615 d287afff5e71b5318cb968c7e3e27efe 250 Pfam PF00156 Phosphoribosyl transferase domain 189 244 5.7E-10 T 14-09-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 AY555_RS00615 d287afff5e71b5318cb968c7e3e27efe 250 SUPERFAMILY SSF53271 76 244 8.92E-30 T 14-09-2016 IPR029057 Phosphoribosyltransferase-like AY555_RS00615 d287afff5e71b5318cb968c7e3e27efe 250 PANTHER PTHR11907:SF9 10 248 2.8E-42 T 14-09-2016 AY555_RS07680 69bb1628e8db2bed15d6d77541fb8db5 173 SMART SM01001 13 164 2.7E-97 T 14-09-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 AY555_RS07680 69bb1628e8db2bed15d6d77541fb8db5 173 Pfam PF00731 AIR carboxylase 16 161 1.3E-62 T 14-09-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 AY555_RS07680 69bb1628e8db2bed15d6d77541fb8db5 173 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 16 166 8.1E-64 T 14-09-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 AY555_RS07680 69bb1628e8db2bed15d6d77541fb8db5 173 PANTHER PTHR11609:SF5 10 166 3.4E-81 T 14-09-2016 AY555_RS07680 69bb1628e8db2bed15d6d77541fb8db5 173 SUPERFAMILY SSF52255 14 170 1.05E-64 T 14-09-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 AY555_RS07680 69bb1628e8db2bed15d6d77541fb8db5 173 PIRSF PIRSF001338 10 172 1.4E-65 T 14-09-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 AY555_RS07680 69bb1628e8db2bed15d6d77541fb8db5 173 PANTHER PTHR11609 10 166 3.4E-81 T 14-09-2016 AY555_RS07680 69bb1628e8db2bed15d6d77541fb8db5 173 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 15 168 31.654 T 14-09-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 AY555_RS07680 69bb1628e8db2bed15d6d77541fb8db5 173 Gene3D G3DSA:3.40.50.7700 11 166 1.5E-72 T 14-09-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 AY555_RS02990 5d7718cda5cc630e0dc73d8b3cd8efa1 254 PANTHER PTHR24322 138 144 2.3E-47 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS02990 5d7718cda5cc630e0dc73d8b3cd8efa1 254 PANTHER PTHR24322 160 191 2.3E-47 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS02990 5d7718cda5cc630e0dc73d8b3cd8efa1 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 3.4E-24 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS02990 5d7718cda5cc630e0dc73d8b3cd8efa1 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.4E-24 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS02990 5d7718cda5cc630e0dc73d8b3cd8efa1 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 3.4E-24 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS02990 5d7718cda5cc630e0dc73d8b3cd8efa1 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 3.4E-24 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS02990 5d7718cda5cc630e0dc73d8b3cd8efa1 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 3.4E-24 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS02990 5d7718cda5cc630e0dc73d8b3cd8efa1 254 PANTHER PTHR24322 10 120 2.3E-47 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS02990 5d7718cda5cc630e0dc73d8b3cd8efa1 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 14-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AY555_RS02990 5d7718cda5cc630e0dc73d8b3cd8efa1 254 PANTHER PTHR24322:SF356 138 144 2.3E-47 T 14-09-2016 AY555_RS02990 5d7718cda5cc630e0dc73d8b3cd8efa1 254 PANTHER PTHR24322:SF356 160 191 2.3E-47 T 14-09-2016 AY555_RS02990 5d7718cda5cc630e0dc73d8b3cd8efa1 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 4.9E-7 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS02990 5d7718cda5cc630e0dc73d8b3cd8efa1 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 4.9E-7 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS02990 5d7718cda5cc630e0dc73d8b3cd8efa1 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 4.9E-7 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS02990 5d7718cda5cc630e0dc73d8b3cd8efa1 254 PANTHER PTHR24322:SF356 10 120 2.3E-47 T 14-09-2016 AY555_RS02990 5d7718cda5cc630e0dc73d8b3cd8efa1 254 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 191 0.0023 T 14-09-2016 AY555_RS02990 5d7718cda5cc630e0dc73d8b3cd8efa1 254 Pfam PF00106 short chain dehydrogenase 7 200 2.5E-45 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS02990 5d7718cda5cc630e0dc73d8b3cd8efa1 254 SUPERFAMILY SSF51735 3 248 8.63E-60 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS02990 5d7718cda5cc630e0dc73d8b3cd8efa1 254 Gene3D G3DSA:3.40.50.720 2 249 6.5E-65 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS07055 c45732bac98862d686a26ffc1e43a7f4 281 PANTHER PTHR30269:SF18 14 279 7.5E-65 T 14-09-2016 AY555_RS07055 c45732bac98862d686a26ffc1e43a7f4 281 PANTHER PTHR30269 14 279 7.5E-65 T 14-09-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 AY555_RS07055 c45732bac98862d686a26ffc1e43a7f4 281 Pfam PF01925 Sulfite exporter TauE/SafE 23 275 5.7E-49 T 14-09-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 AY555_RS08505 b4491a5a6e394636bf5e24cf884c2ee0 376 PANTHER PTHR40253 1 374 8.4E-35 T 14-09-2016 AY555_RS08505 b4491a5a6e394636bf5e24cf884c2ee0 376 Pfam PF10098 Uncharacterised protein conserved in bacteria (DUF2336) 96 349 1.4E-48 T 14-09-2016 IPR019285 Protein of unknown function DUF2336 AY555_RS08540 276c33ae60c45f7622963e5e660e7517 223 PANTHER PTHR22939 33 205 3.0E-38 T 14-09-2016 AY555_RS08540 276c33ae60c45f7622963e5e660e7517 223 PANTHER PTHR22939:SF104 33 205 3.0E-38 T 14-09-2016 AY555_RS03180 32e7739489a7b6d4008c215a2093a040 230 Gene3D G3DSA:3.40.30.10 11 101 1.0E-26 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS03180 32e7739489a7b6d4008c215a2093a040 230 SUPERFAMILY SSF52833 10 110 6.6E-22 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS03180 32e7739489a7b6d4008c215a2093a040 230 PANTHER PTHR11260 10 214 5.8E-62 T 14-09-2016 AY555_RS03180 32e7739489a7b6d4008c215a2093a040 230 Gene3D G3DSA:1.20.1050.10 102 226 7.2E-34 T 14-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like AY555_RS03180 32e7739489a7b6d4008c215a2093a040 230 PANTHER PTHR11260:SF286 10 214 5.8E-62 T 14-09-2016 AY555_RS03180 32e7739489a7b6d4008c215a2093a040 230 Pfam PF00043 Glutathione S-transferase, C-terminal domain 153 206 3.4E-6 T 14-09-2016 IPR004046 Glutathione S-transferase, C-terminal AY555_RS03180 32e7739489a7b6d4008c215a2093a040 230 SUPERFAMILY SSF47616 78 224 3.27E-25 T 14-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like AY555_RS03180 32e7739489a7b6d4008c215a2093a040 230 Pfam PF13417 Glutathione S-transferase, N-terminal domain 12 85 6.9E-17 T 14-09-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AY555_RS02055 a2660d28d7702dc608a772e00bdc1bfe 535 SUPERFAMILY SSF52540 40 214 9.82E-13 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS02055 a2660d28d7702dc608a772e00bdc1bfe 535 PANTHER PTHR34383 2 242 1.8E-211 T 14-09-2016 AY555_RS02055 a2660d28d7702dc608a772e00bdc1bfe 535 PANTHER PTHR34383:SF3 2 242 1.8E-211 T 14-09-2016 AY555_RS02055 a2660d28d7702dc608a772e00bdc1bfe 535 Gene3D G3DSA:3.40.50.300 284 524 5.8E-97 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS02055 a2660d28d7702dc608a772e00bdc1bfe 535 Gene3D G3DSA:3.40.50.300 1 238 2.9E-72 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS02055 a2660d28d7702dc608a772e00bdc1bfe 535 PANTHER PTHR34383:SF3 274 520 1.8E-211 T 14-09-2016 AY555_RS02055 a2660d28d7702dc608a772e00bdc1bfe 535 PANTHER PTHR34383 274 520 1.8E-211 T 14-09-2016 AY555_RS02055 a2660d28d7702dc608a772e00bdc1bfe 535 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 11 231 3.5E-49 T 14-09-2016 IPR022488 Polyphosphate kinase-2-related AY555_RS02055 a2660d28d7702dc608a772e00bdc1bfe 535 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 301 520 1.3E-82 T 14-09-2016 IPR022488 Polyphosphate kinase-2-related AY555_RS02055 a2660d28d7702dc608a772e00bdc1bfe 535 SUPERFAMILY SSF52540 330 518 2.97E-23 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS03095 d2d04a4cb4311f1053f4a7d13f068f3f 360 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 198 326 6.6E-16 T 14-09-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AY555_RS03095 d2d04a4cb4311f1053f4a7d13f068f3f 360 PANTHER PTHR40572 72 334 5.3E-51 T 14-09-2016 AY555_RS02830 820ad2586adcb912a69fc1375fbf18ae 260 PANTHER PTHR36180:SF2 1 126 2.6E-28 T 14-09-2016 AY555_RS02830 820ad2586adcb912a69fc1375fbf18ae 260 Pfam PF03288 Poxvirus D5 protein-like 191 236 4.3E-5 T 14-09-2016 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal AY555_RS02830 820ad2586adcb912a69fc1375fbf18ae 260 PANTHER PTHR36180 1 126 2.6E-28 T 14-09-2016 AY555_RS02830 820ad2586adcb912a69fc1375fbf18ae 260 Pfam PF02498 BRO family, N-terminal domain 24 115 3.3E-29 T 14-09-2016 IPR003497 BRO N-terminal domain AY555_RS02830 820ad2586adcb912a69fc1375fbf18ae 260 SMART SM01040 24 115 3.1E-40 T 14-09-2016 IPR003497 BRO N-terminal domain AY555_RS02985 0cdde18221f1b51cd1bd9cd6df5e722e 669 Gene3D G3DSA:3.30.300.30 544 647 1.6E-17 T 14-09-2016 AY555_RS02985 0cdde18221f1b51cd1bd9cd6df5e722e 669 Gene3D G3DSA:3.40.50.980 117 293 2.2E-28 T 14-09-2016 AY555_RS02985 0cdde18221f1b51cd1bd9cd6df5e722e 669 Pfam PF13193 AMP-binding enzyme C-terminal domain 561 631 2.1E-6 T 14-09-2016 IPR025110 AMP-binding enzyme C-terminal domain AY555_RS02985 0cdde18221f1b51cd1bd9cd6df5e722e 669 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 23 667 4.5E-288 T 14-09-2016 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16 AY555_RS02985 0cdde18221f1b51cd1bd9cd6df5e722e 669 ProSitePatterns PS00455 Putative AMP-binding domain signature. 287 298 - T 14-09-2016 IPR020845 AMP-binding, conserved site AY555_RS02985 0cdde18221f1b51cd1bd9cd6df5e722e 669 PANTHER PTHR24095:SF46 23 663 1.6E-285 T 14-09-2016 AY555_RS02985 0cdde18221f1b51cd1bd9cd6df5e722e 669 SUPERFAMILY SSF56801 39 658 3.53E-126 T 14-09-2016 AY555_RS02985 0cdde18221f1b51cd1bd9cd6df5e722e 669 Pfam PF00501 AMP-binding enzyme 116 543 2.5E-45 T 14-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AY555_RS02985 0cdde18221f1b51cd1bd9cd6df5e722e 669 PANTHER PTHR24095 23 663 1.6E-285 T 14-09-2016 AY555_RS02985 0cdde18221f1b51cd1bd9cd6df5e722e 669 Gene3D G3DSA:3.40.50.980 294 446 4.2E-13 T 14-09-2016 AY555_RS02985 0cdde18221f1b51cd1bd9cd6df5e722e 669 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 55 110 5.0E-8 T 14-09-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 AY555_RS07095 22871a9e20b165db72196e975f16ab99 188 PIRSF PIRSF036158 4 188 1.7E-58 T 14-09-2016 IPR014601 Transcriptional regulator with MarR-type HTH domain AY555_RS07095 22871a9e20b165db72196e975f16ab99 188 SUPERFAMILY SSF46785 45 175 7.1E-13 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS07095 22871a9e20b165db72196e975f16ab99 188 Gene3D G3DSA:1.10.10.10 70 149 4.0E-9 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS07095 22871a9e20b165db72196e975f16ab99 188 Pfam PF13463 Winged helix DNA-binding domain 71 135 3.2E-17 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AY555_RS08630 98f133a483a8ea99a6a3f740206d7575 96 Pfam PF02416 mttA/Hcf106 family 5 47 2.1E-4 T 14-09-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AY555_RS08630 98f133a483a8ea99a6a3f740206d7575 96 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 2.9E-9 T 14-09-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 AY555_RS08630 98f133a483a8ea99a6a3f740206d7575 96 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 2.9E-9 T 14-09-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 AY555_RS07550 be926602d974233857781a5e323db056 591 SUPERFAMILY SSF51120 123 255 6.15E-21 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS07550 be926602d974233857781a5e323db056 591 SUPERFAMILY SSF51120 41 71 6.15E-21 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS07550 be926602d974233857781a5e323db056 591 PRINTS PR00313 NodO calcium binding signature 422 431 1.3E-10 T 14-09-2016 AY555_RS07550 be926602d974233857781a5e323db056 591 PRINTS PR00313 NodO calcium binding signature 413 421 1.3E-10 T 14-09-2016 AY555_RS07550 be926602d974233857781a5e323db056 591 PRINTS PR00313 NodO calcium binding signature 187 198 1.3E-10 T 14-09-2016 AY555_RS07550 be926602d974233857781a5e323db056 591 PRINTS PR00313 NodO calcium binding signature 404 412 1.3E-10 T 14-09-2016 AY555_RS07550 be926602d974233857781a5e323db056 591 Gene3D G3DSA:2.150.10.10 44 70 5.3E-18 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS07550 be926602d974233857781a5e323db056 591 Gene3D G3DSA:2.150.10.10 122 248 5.3E-18 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS07550 be926602d974233857781a5e323db056 591 Gene3D G3DSA:2.150.10.10 322 466 8.4E-20 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS07550 be926602d974233857781a5e323db056 591 Pfam PF08548 Peptidase M10 serralysin C terminal 127 252 1.3E-4 T 14-09-2016 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 AY555_RS07550 be926602d974233857781a5e323db056 591 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 409 427 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS07550 be926602d974233857781a5e323db056 591 SUPERFAMILY SSF51120 320 465 2.35E-25 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS06095 8d1cf6404f3191d903079f18c9d868a0 425 Pfam PF14450 Cell division protein FtsA 13 194 2.6E-8 T 14-09-2016 AY555_RS06095 8d1cf6404f3191d903079f18c9d868a0 425 Pfam PF14450 Cell division protein FtsA 211 379 3.3E-20 T 14-09-2016 AY555_RS06095 8d1cf6404f3191d903079f18c9d868a0 425 Gene3D G3DSA:3.90.640.10 238 303 3.2E-17 T 14-09-2016 AY555_RS06095 8d1cf6404f3191d903079f18c9d868a0 425 PANTHER PTHR32432 1 400 4.9E-101 T 14-09-2016 AY555_RS06095 8d1cf6404f3191d903079f18c9d868a0 425 Pfam PF02491 SHS2 domain inserted in FTSA 86 164 7.8E-20 T 14-09-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 AY555_RS06095 8d1cf6404f3191d903079f18c9d868a0 425 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 11 384 5.6E-105 T 14-09-2016 IPR020823 Cell division protein FtsA GO:0007049 AY555_RS06095 8d1cf6404f3191d903079f18c9d868a0 425 Gene3D G3DSA:3.30.420.40 202 237 5.6E-24 T 14-09-2016 AY555_RS06095 8d1cf6404f3191d903079f18c9d868a0 425 Gene3D G3DSA:3.30.420.40 304 358 5.6E-24 T 14-09-2016 AY555_RS06095 8d1cf6404f3191d903079f18c9d868a0 425 SMART SM00842 11 199 9.8E-72 T 14-09-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 AY555_RS06095 8d1cf6404f3191d903079f18c9d868a0 425 SUPERFAMILY SSF53067 12 199 2.28E-42 T 14-09-2016 AY555_RS06095 8d1cf6404f3191d903079f18c9d868a0 425 PIRSF PIRSF003101 2 425 2.7E-125 T 14-09-2016 IPR020823 Cell division protein FtsA GO:0007049 AY555_RS06095 8d1cf6404f3191d903079f18c9d868a0 425 Hamap MF_02033 Cell division protein FtsA [ftsA]. 7 425 25.757 T 14-09-2016 IPR020823 Cell division protein FtsA GO:0007049 AY555_RS06095 8d1cf6404f3191d903079f18c9d868a0 425 Gene3D G3DSA:3.30.420.40 7 142 2.0E-27 T 14-09-2016 AY555_RS06095 8d1cf6404f3191d903079f18c9d868a0 425 PANTHER PTHR32432:SF4 1 400 4.9E-101 T 14-09-2016 AY555_RS06095 8d1cf6404f3191d903079f18c9d868a0 425 SUPERFAMILY SSF53067 202 383 2.07E-41 T 14-09-2016 AY555_RS06095 8d1cf6404f3191d903079f18c9d868a0 425 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 211 224 - T 14-09-2016 IPR018181 Heat shock protein 70, conserved site AY555_RS02130 19e516d8d6665f9dee8e048b961c0a60 317 SUPERFAMILY SSF51735 2 313 8.59E-65 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS02130 19e516d8d6665f9dee8e048b961c0a60 317 PANTHER PTHR10366:SF329 2 310 1.3E-96 T 14-09-2016 AY555_RS02130 19e516d8d6665f9dee8e048b961c0a60 317 PANTHER PTHR10366 2 310 1.3E-96 T 14-09-2016 AY555_RS02130 19e516d8d6665f9dee8e048b961c0a60 317 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 224 3.1E-27 T 14-09-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AY555_RS02130 19e516d8d6665f9dee8e048b961c0a60 317 Gene3D G3DSA:3.40.50.720 2 310 1.1E-51 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS00885 b7255ec04bfbc05048ad8cff2f4ad0c5 120 PANTHER PTHR12899 4 120 5.8E-45 T 14-09-2016 AY555_RS00885 b7255ec04bfbc05048ad8cff2f4ad0c5 120 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 9 120 4.0E-40 T 14-09-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00885 b7255ec04bfbc05048ad8cff2f4ad0c5 120 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 3 120 27.761 T 14-09-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS00885 b7255ec04bfbc05048ad8cff2f4ad0c5 120 SUPERFAMILY SSF53137 9 118 1.5E-49 T 14-09-2016 AY555_RS00885 b7255ec04bfbc05048ad8cff2f4ad0c5 120 Gene3D G3DSA:3.30.420.100 24 120 2.4E-39 T 14-09-2016 AY555_RS00885 b7255ec04bfbc05048ad8cff2f4ad0c5 120 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 9 120 1.2E-41 T 14-09-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS05470 43c65ec009885640a5722b3ef7d07bbe 117 SUPERFAMILY SSF53335 1 86 2.67E-8 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS05470 43c65ec009885640a5722b3ef7d07bbe 117 Gene3D G3DSA:3.40.50.150 1 115 5.5E-8 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS04275 911cb173e2b6f84c67e86f03696c8ed4 354 Pfam PF01212 Beta-eliminating lyase 6 297 1.1E-58 T 14-09-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 AY555_RS04275 911cb173e2b6f84c67e86f03696c8ed4 354 Gene3D G3DSA:3.40.640.10 3 253 6.7E-59 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AY555_RS04275 911cb173e2b6f84c67e86f03696c8ed4 354 SUPERFAMILY SSF53383 4 344 4.73E-95 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AY555_RS04275 911cb173e2b6f84c67e86f03696c8ed4 354 PANTHER PTHR10289:SF8 2 347 8.3E-116 T 14-09-2016 AY555_RS04275 911cb173e2b6f84c67e86f03696c8ed4 354 Gene3D G3DSA:3.90.1150.10 257 346 5.9E-20 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AY555_RS04275 911cb173e2b6f84c67e86f03696c8ed4 354 PIRSF PIRSF038940 3 350 2.4E-136 T 14-09-2016 IPR026273 Low specificity L-threonine aldolase GO:0004793|GO:0006567 KEGG: 00260+4.1.2.48 AY555_RS04275 911cb173e2b6f84c67e86f03696c8ed4 354 PANTHER PTHR10289 2 347 8.3E-116 T 14-09-2016 AY555_RS03595 c9414a749e47bf76b4f116d7e69e16e5 164 PANTHER PTHR11717:SF7 3 155 1.0E-56 T 14-09-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AY555_RS03595 c9414a749e47bf76b4f116d7e69e16e5 164 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 3 20 1.3E-22 T 14-09-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AY555_RS03595 c9414a749e47bf76b4f116d7e69e16e5 164 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 46 62 1.3E-22 T 14-09-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AY555_RS03595 c9414a749e47bf76b4f116d7e69e16e5 164 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 123 138 1.3E-22 T 14-09-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AY555_RS03595 c9414a749e47bf76b4f116d7e69e16e5 164 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 80 95 1.3E-22 T 14-09-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AY555_RS03595 c9414a749e47bf76b4f116d7e69e16e5 164 SMART SM00226 1 151 1.4E-45 T 14-09-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily AY555_RS03595 c9414a749e47bf76b4f116d7e69e16e5 164 PANTHER PTHR11717 3 155 1.0E-56 T 14-09-2016 AY555_RS03595 c9414a749e47bf76b4f116d7e69e16e5 164 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 3 149 9.2E-41 T 14-09-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily AY555_RS03595 c9414a749e47bf76b4f116d7e69e16e5 164 SUPERFAMILY SSF52788 3 152 6.67E-49 T 14-09-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily AY555_RS03595 c9414a749e47bf76b4f116d7e69e16e5 164 Gene3D G3DSA:3.40.50.270 3 156 1.1E-53 T 14-09-2016 AY555_RS00915 7aeadcd601b592d05f27907d1e7b8340 122 SMART SM01374 1 122 1.0E-75 T 14-09-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AY555_RS00915 7aeadcd601b592d05f27907d1e7b8340 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 25.774 T 14-09-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AY555_RS00915 7aeadcd601b592d05f27907d1e7b8340 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 3.8E-52 T 14-09-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 AY555_RS00915 7aeadcd601b592d05f27907d1e7b8340 122 PANTHER PTHR11761 1 122 5.3E-65 T 14-09-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AY555_RS00915 7aeadcd601b592d05f27907d1e7b8340 122 SUPERFAMILY SSF50193 1 122 5.36E-48 T 14-09-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AY555_RS00915 7aeadcd601b592d05f27907d1e7b8340 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 6.8E-51 T 14-09-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AY555_RS00915 7aeadcd601b592d05f27907d1e7b8340 122 Gene3D G3DSA:2.40.150.20 1 122 2.9E-51 T 14-09-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AY555_RS00915 7aeadcd601b592d05f27907d1e7b8340 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 14-09-2016 IPR019972 Ribosomal protein L14P, conserved site AY555_RS06595 f413435159c776edcc30627c2cbba9c9 165 SUPERFAMILY SSF47413 1 70 3.92E-11 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AY555_RS06595 f413435159c776edcc30627c2cbba9c9 165 Pfam PF08965 Domain of unknown function (DUF1870) 1 113 9.8E-6 T 14-09-2016 IPR015060 Protein of unknown function DUF1870 AY555_RS06595 f413435159c776edcc30627c2cbba9c9 165 Gene3D G3DSA:1.10.260.40 5 55 6.3E-8 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AY555_RS07730 0344da0830bbeb65c2a0dd802e6831e5 438 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.4E-15 T 14-09-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AY555_RS07730 0344da0830bbeb65c2a0dd802e6831e5 438 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.4E-15 T 14-09-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AY555_RS07730 0344da0830bbeb65c2a0dd802e6831e5 438 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.4E-15 T 14-09-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AY555_RS07730 0344da0830bbeb65c2a0dd802e6831e5 438 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.4E-15 T 14-09-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AY555_RS07730 0344da0830bbeb65c2a0dd802e6831e5 438 PANTHER PTHR11451:SF3 4 216 1.0E-137 T 14-09-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AY555_RS07730 0344da0830bbeb65c2a0dd802e6831e5 438 Pfam PF03129 Anticodon binding domain 345 434 9.6E-17 T 14-09-2016 IPR004154 Anticodon-binding AY555_RS07730 0344da0830bbeb65c2a0dd802e6831e5 438 SUPERFAMILY SSF52954 332 436 2.78E-28 T 14-09-2016 IPR004154 Anticodon-binding AY555_RS07730 0344da0830bbeb65c2a0dd802e6831e5 438 Gene3D G3DSA:3.40.50.800 339 436 4.6E-25 T 14-09-2016 IPR004154 Anticodon-binding AY555_RS07730 0344da0830bbeb65c2a0dd802e6831e5 438 Hamap MF_01570 Proline--tRNA ligase [proS]. 1 437 61.24 T 14-09-2016 IPR023716 Proline-tRNA ligase, class IIa, type 2 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AY555_RS07730 0344da0830bbeb65c2a0dd802e6831e5 438 PANTHER PTHR11451:SF3 240 438 1.0E-137 T 14-09-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AY555_RS07730 0344da0830bbeb65c2a0dd802e6831e5 438 PANTHER PTHR11451 4 216 1.0E-137 T 14-09-2016 AY555_RS07730 0344da0830bbeb65c2a0dd802e6831e5 438 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 96 327 3.2E-33 T 14-09-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS07730 0344da0830bbeb65c2a0dd802e6831e5 438 SUPERFAMILY SSF55681 10 236 4.61E-93 T 14-09-2016 AY555_RS07730 0344da0830bbeb65c2a0dd802e6831e5 438 SUPERFAMILY SSF55681 276 347 4.61E-93 T 14-09-2016 AY555_RS07730 0344da0830bbeb65c2a0dd802e6831e5 438 Gene3D G3DSA:3.30.930.10 6 204 6.8E-94 T 14-09-2016 AY555_RS07730 0344da0830bbeb65c2a0dd802e6831e5 438 Gene3D G3DSA:3.30.930.10 257 337 6.8E-94 T 14-09-2016 AY555_RS07730 0344da0830bbeb65c2a0dd802e6831e5 438 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 223 3.9E-98 T 14-09-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AY555_RS07730 0344da0830bbeb65c2a0dd802e6831e5 438 PANTHER PTHR11451 240 438 1.0E-137 T 14-09-2016 AY555_RS07220 d593838274ca7699d26af68b1edba56f 258 Pfam PF09836 Putative DNA-binding domain 15 102 8.5E-15 T 14-09-2016 IPR018640 Putative DNA-binding domain, bacteria AY555_RS03960 858e8849571fb8f9715bccf2de5c5be3 271 Gene3D G3DSA:3.40.630.30 15 157 6.2E-24 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AY555_RS03960 858e8849571fb8f9715bccf2de5c5be3 271 PANTHER PTHR37323 1 256 1.8E-45 T 14-09-2016 AY555_RS03960 858e8849571fb8f9715bccf2de5c5be3 271 SUPERFAMILY SSF55729 13 232 1.03E-39 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AY555_RS03960 858e8849571fb8f9715bccf2de5c5be3 271 PANTHER PTHR37323:SF1 1 256 1.8E-45 T 14-09-2016 AY555_RS03960 858e8849571fb8f9715bccf2de5c5be3 271 Pfam PF13444 Acetyltransferase (GNAT) domain 29 136 7.4E-35 T 14-09-2016 AY555_RS01900 2f3a2e09c7be772f66f105eaf2efd7da 264 SUPERFAMILY SSF53474 2 256 2.18E-27 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AY555_RS01900 2f3a2e09c7be772f66f105eaf2efd7da 264 Pfam PF12697 Alpha/beta hydrolase family 4 246 1.2E-7 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AY555_RS01900 2f3a2e09c7be772f66f105eaf2efd7da 264 Gene3D G3DSA:3.40.50.1820 1 256 1.0E-21 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AY555_RS01900 2f3a2e09c7be772f66f105eaf2efd7da 264 PANTHER PTHR36837 3 256 7.3E-32 T 14-09-2016 AY555_RS06640 5659ccd8412d45f89369ac0cc9174711 522 SUPERFAMILY SSF109604 317 508 1.16E-38 T 14-09-2016 AY555_RS06640 5659ccd8412d45f89369ac0cc9174711 522 SUPERFAMILY SSF52172 24 164 1.37E-11 T 14-09-2016 IPR011006 CheY-like superfamily AY555_RS06640 5659ccd8412d45f89369ac0cc9174711 522 Gene3D G3DSA:3.40.50.2300 26 159 2.1E-12 T 14-09-2016 AY555_RS06640 5659ccd8412d45f89369ac0cc9174711 522 Pfam PF00072 Response regulator receiver domain 28 137 1.5E-6 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS06640 5659ccd8412d45f89369ac0cc9174711 522 SMART SM00471 340 477 3.6E-6 T 14-09-2016 IPR003607 HD/PDEase domain AY555_RS06640 5659ccd8412d45f89369ac0cc9174711 522 Pfam PF13487 HD domain 395 458 2.3E-16 T 14-09-2016 AY555_RS06640 5659ccd8412d45f89369ac0cc9174711 522 Gene3D G3DSA:1.10.3210.10 331 510 4.8E-20 T 14-09-2016 IPR006674 HD domain AY555_RS06640 5659ccd8412d45f89369ac0cc9174711 522 Pfam PF11849 Domain of unknown function (DUF3369) 149 319 4.1E-22 T 14-09-2016 IPR021800 Domain of unknown function DUF3369 AY555_RS01425 197c54ee620b275216ad6dc821341ecd 335 SUPERFAMILY SSF55811 2 146 3.04E-11 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AY555_RS01425 197c54ee620b275216ad6dc821341ecd 335 PIRSF PIRSF019423 1 332 1.7E-110 T 14-09-2016 IPR011213 Nicotinic acid mononucleotide biosynthesis protein AY555_RS01425 197c54ee620b275216ad6dc821341ecd 335 Gene3D G3DSA:3.90.79.10 2 121 1.2E-10 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AY555_RS01425 197c54ee620b275216ad6dc821341ecd 335 Gene3D G3DSA:3.90.79.10 221 254 1.2E-10 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AY555_RS01425 197c54ee620b275216ad6dc821341ecd 335 SUPERFAMILY SSF46785 250 321 4.35E-21 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS01425 197c54ee620b275216ad6dc821341ecd 335 Gene3D G3DSA:1.10.10.10 255 319 2.9E-28 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS02190 4b7ccc6c9f71e6d17471e40a896d37ca 260 SUPERFAMILY SSF50199 49 148 1.16E-7 T 14-09-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AY555_RS07060 ad9166554b92629d6fe58461dec754ee 340 SUPERFAMILY SSF56801 13 327 1.57E-50 T 14-09-2016 AY555_RS07060 ad9166554b92629d6fe58461dec754ee 340 Gene3D G3DSA:3.40.50.980 23 167 2.0E-24 T 14-09-2016 AY555_RS07060 ad9166554b92629d6fe58461dec754ee 340 PANTHER PTHR24096:SF206 33 327 8.4E-53 T 14-09-2016 AY555_RS07060 ad9166554b92629d6fe58461dec754ee 340 Pfam PF00501 AMP-binding enzyme 26 330 7.9E-44 T 14-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AY555_RS07060 ad9166554b92629d6fe58461dec754ee 340 PANTHER PTHR24096 33 327 8.4E-53 T 14-09-2016 AY555_RS07060 ad9166554b92629d6fe58461dec754ee 340 Gene3D G3DSA:3.40.50.980 168 326 1.3E-21 T 14-09-2016 AY555_RS03705 2139dadb81393ff0126326a277f3686a 240 PANTHER PTHR11953:SF0 1 236 4.1E-83 T 14-09-2016 AY555_RS03705 2139dadb81393ff0126326a277f3686a 240 SUPERFAMILY SSF55666 152 235 2.36E-23 T 14-09-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 AY555_RS03705 2139dadb81393ff0126326a277f3686a 240 Pfam PF03725 3' exoribonuclease family, domain 2 158 223 2.8E-11 T 14-09-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 AY555_RS03705 2139dadb81393ff0126326a277f3686a 240 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 3.0E-27 T 14-09-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 AY555_RS03705 2139dadb81393ff0126326a277f3686a 240 Gene3D G3DSA:3.30.230.70 8 235 1.8E-34 T 14-09-2016 IPR027408 PNPase/RNase PH domain AY555_RS03705 2139dadb81393ff0126326a277f3686a 240 SUPERFAMILY SSF54211 1 181 3.95E-47 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AY555_RS03705 2139dadb81393ff0126326a277f3686a 240 PANTHER PTHR11953 1 236 4.1E-83 T 14-09-2016 AY555_RS03705 2139dadb81393ff0126326a277f3686a 240 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 48.202 T 14-09-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 AY555_RS03705 2139dadb81393ff0126326a277f3686a 240 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 14-09-2016 IPR018336 Ribonuclease PH, conserved site AY555_RS03705 2139dadb81393ff0126326a277f3686a 240 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 5.4E-114 T 14-09-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 AY555_RS00390 962cb6974921e876249c1ab37cfb95b0 197 Pfam PF08212 Lipocalin-like domain 51 193 1.7E-46 T 14-09-2016 IPR000566 Lipocalin/cytosolic fatty-acid binding domain AY555_RS00390 962cb6974921e876249c1ab37cfb95b0 197 PRINTS PR01171 Bacterial lipocalin signature 155 166 4.3E-14 T 14-09-2016 IPR002446 Lipocalin, bacterial GO:0005215 AY555_RS00390 962cb6974921e876249c1ab37cfb95b0 197 PRINTS PR01171 Bacterial lipocalin signature 51 65 4.3E-14 T 14-09-2016 IPR002446 Lipocalin, bacterial GO:0005215 AY555_RS00390 962cb6974921e876249c1ab37cfb95b0 197 PRINTS PR01171 Bacterial lipocalin signature 68 84 4.3E-14 T 14-09-2016 IPR002446 Lipocalin, bacterial GO:0005215 AY555_RS00390 962cb6974921e876249c1ab37cfb95b0 197 PRINTS PR01171 Bacterial lipocalin signature 123 137 4.3E-14 T 14-09-2016 IPR002446 Lipocalin, bacterial GO:0005215 AY555_RS00390 962cb6974921e876249c1ab37cfb95b0 197 PRINTS PR01171 Bacterial lipocalin signature 87 96 4.3E-14 T 14-09-2016 IPR002446 Lipocalin, bacterial GO:0005215 AY555_RS00390 962cb6974921e876249c1ab37cfb95b0 197 PRINTS PR01171 Bacterial lipocalin signature 182 192 4.3E-14 T 14-09-2016 IPR002446 Lipocalin, bacterial GO:0005215 AY555_RS00390 962cb6974921e876249c1ab37cfb95b0 197 SUPERFAMILY SSF50814 32 193 1.03E-38 T 14-09-2016 IPR011038 Calycin-like AY555_RS00390 962cb6974921e876249c1ab37cfb95b0 197 PIRSF PIRSF036893 17 196 3.9E-50 T 14-09-2016 IPR022271 Lipocalin, ApoD type AY555_RS00390 962cb6974921e876249c1ab37cfb95b0 197 PANTHER PTHR10612 45 193 6.6E-38 T 14-09-2016 AY555_RS00390 962cb6974921e876249c1ab37cfb95b0 197 ProSitePatterns PS00213 Lipocalin signature. 52 63 - T 14-09-2016 IPR022272 Lipocalin family conserved site AY555_RS00390 962cb6974921e876249c1ab37cfb95b0 197 Gene3D G3DSA:2.40.128.20 23 193 5.0E-49 T 14-09-2016 IPR012674 Calycin AY555_RS00310 b14dbc2e6337820721646781cef0ea0a 297 SUPERFAMILY SSF53474 94 279 1.79E-15 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AY555_RS00310 b14dbc2e6337820721646781cef0ea0a 297 Gene3D G3DSA:3.40.50.1820 145 274 3.3E-13 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AY555_RS05010 fe7a3f29d96318dfe5eb31f401ca053f 106 PANTHER PTHR30561:SF0 1 106 2.3E-27 T 14-09-2016 AY555_RS05010 fe7a3f29d96318dfe5eb31f401ca053f 106 SUPERFAMILY SSF103481 8 104 6.67E-14 T 14-09-2016 AY555_RS05010 fe7a3f29d96318dfe5eb31f401ca053f 106 Pfam PF00893 Small Multidrug Resistance protein 4 95 1.2E-19 T 14-09-2016 IPR000390 Small multidrug resistance protein family GO:0016021 AY555_RS05010 fe7a3f29d96318dfe5eb31f401ca053f 106 PANTHER PTHR30561 1 106 2.3E-27 T 14-09-2016 AY555_RS01160 81118a1c1cff0a7934a79a0d078abd6b 757 Gene3D G3DSA:3.40.50.300 312 415 3.9E-61 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS01160 81118a1c1cff0a7934a79a0d078abd6b 757 Gene3D G3DSA:3.40.50.300 571 663 3.9E-61 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS01160 81118a1c1cff0a7934a79a0d078abd6b 757 Gene3D G3DSA:1.10.10.160 138 216 2.4E-16 T 14-09-2016 IPR013986 DExx box DNA helicase domain AY555_RS01160 81118a1c1cff0a7934a79a0d078abd6b 757 Pfam PF00580 UvrD/REP helicase N-terminal domain 34 298 5.4E-69 T 14-09-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 AY555_RS01160 81118a1c1cff0a7934a79a0d078abd6b 757 PANTHER PTHR11070 31 725 4.6E-206 T 14-09-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 AY555_RS01160 81118a1c1cff0a7934a79a0d078abd6b 757 Pfam PF13361 UvrD-like helicase C-terminal domain 303 637 2.2E-62 T 14-09-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AY555_RS01160 81118a1c1cff0a7934a79a0d078abd6b 757 SUPERFAMILY SSF52540 29 663 4.21E-170 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS01160 81118a1c1cff0a7934a79a0d078abd6b 757 Gene3D G3DSA:1.10.486.10 416 560 3.7E-45 T 14-09-2016 AY555_RS01160 81118a1c1cff0a7934a79a0d078abd6b 757 PANTHER PTHR11070:SF7 31 725 4.6E-206 T 14-09-2016 AY555_RS01160 81118a1c1cff0a7934a79a0d078abd6b 757 Gene3D G3DSA:3.40.50.300 217 311 5.1E-68 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS01160 81118a1c1cff0a7934a79a0d078abd6b 757 Gene3D G3DSA:3.40.50.300 30 134 5.1E-68 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS09785 1952d22c0c6023dbf72a5b7267410bfb 272 Pfam PF11150 Protein of unknown function (DUF2927) 47 260 6.1E-10 T 14-09-2016 IPR021323 Protein of unknown function DUF2927 AY555_RS05335 dd99ee51544ae1e88cf3f519350adc41 230 Pfam PF03458 UPF0126 domain 107 178 1.3E-17 T 14-09-2016 IPR005115 Uncharacterised domain UPF0126 AY555_RS05335 dd99ee51544ae1e88cf3f519350adc41 230 Pfam PF03458 UPF0126 domain 21 95 3.7E-19 T 14-09-2016 IPR005115 Uncharacterised domain UPF0126 AY555_RS05335 dd99ee51544ae1e88cf3f519350adc41 230 PANTHER PTHR30506 13 225 1.5E-59 T 14-09-2016 AY555_RS04860 7f38015840c7ccbab8a2fc831527720f 111 Pfam PF04380 Membrane fusogenic activity 2 77 5.0E-23 T 14-09-2016 IPR007475 Membrane fusogenic activity AY555_RS04860 7f38015840c7ccbab8a2fc831527720f 111 Pfam PF12126 Protein of unknown function (DUF3583) 2 81 4.7E-6 T 14-09-2016 IPR021978 Protein of unknown function DUF3583 AY555_RS04175 7e8bc168bae232ce47bd24440ebb3970 175 Pfam PF01381 Helix-turn-helix 34 83 1.2E-12 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AY555_RS04175 7e8bc168bae232ce47bd24440ebb3970 175 SMART SM00530 30 85 7.1E-12 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AY555_RS04175 7e8bc168bae232ce47bd24440ebb3970 175 PANTHER PTHR10245 1 174 7.4E-29 T 14-09-2016 AY555_RS04175 7e8bc168bae232ce47bd24440ebb3970 175 SUPERFAMILY SSF47413 14 99 1.34E-28 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AY555_RS04175 7e8bc168bae232ce47bd24440ebb3970 175 Gene3D G3DSA:1.10.260.40 27 88 4.5E-17 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AY555_RS04175 7e8bc168bae232ce47bd24440ebb3970 175 PANTHER PTHR10245:SF38 1 174 7.4E-29 T 14-09-2016 AY555_RS00160 192159cd1c22bef4fecda9fee89ddab5 254 PRINTS PR01008 Flagellar L-ring protein signature 231 245 2.0E-23 T 14-09-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AY555_RS00160 192159cd1c22bef4fecda9fee89ddab5 254 PRINTS PR01008 Flagellar L-ring protein signature 86 98 2.0E-23 T 14-09-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AY555_RS00160 192159cd1c22bef4fecda9fee89ddab5 254 PRINTS PR01008 Flagellar L-ring protein signature 215 229 2.0E-23 T 14-09-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AY555_RS00160 192159cd1c22bef4fecda9fee89ddab5 254 PRINTS PR01008 Flagellar L-ring protein signature 168 183 2.0E-23 T 14-09-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AY555_RS00160 192159cd1c22bef4fecda9fee89ddab5 254 PRINTS PR01008 Flagellar L-ring protein signature 194 210 2.0E-23 T 14-09-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AY555_RS00160 192159cd1c22bef4fecda9fee89ddab5 254 PANTHER PTHR34933:SF1 39 254 3.6E-53 T 14-09-2016 AY555_RS00160 192159cd1c22bef4fecda9fee89ddab5 254 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 252 23.605 T 14-09-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AY555_RS00160 192159cd1c22bef4fecda9fee89ddab5 254 Pfam PF02107 Flagellar L-ring protein 66 253 2.3E-51 T 14-09-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AY555_RS00160 192159cd1c22bef4fecda9fee89ddab5 254 PANTHER PTHR34933 39 254 3.6E-53 T 14-09-2016 AY555_RS00545 ed4de0ff2b61b9895055d1a647ec6e3c 110 Pfam PF10984 Protein of unknown function (DUF2794) 19 77 3.3E-12 T 14-09-2016 IPR021252 Protein of unknown function DUF2794 AY555_RS03220 283a9f3e7d6c038ea68c96300f3b2f55 101 SUPERFAMILY SSF54909 1 92 1.57E-22 T 14-09-2016 IPR011008 Dimeric alpha-beta barrel AY555_RS03220 283a9f3e7d6c038ea68c96300f3b2f55 101 PANTHER PTHR33606 1 93 8.3E-19 T 14-09-2016 AY555_RS03220 283a9f3e7d6c038ea68c96300f3b2f55 101 Gene3D G3DSA:3.30.70.1060 1 92 9.2E-25 T 14-09-2016 AY555_RS03220 283a9f3e7d6c038ea68c96300f3b2f55 101 Pfam PF03795 YCII-related domain 3 87 2.3E-15 T 14-09-2016 IPR005545 YCII-related AY555_RS08410 10e3a0585574192b1aa77cec2f257384 684 PANTHER PTHR23028 20 475 2.8E-81 T 14-09-2016 AY555_RS08410 10e3a0585574192b1aa77cec2f257384 684 Pfam PF01757 Acyltransferase family 25 370 1.9E-19 T 14-09-2016 IPR002656 Acyltransferase 3 GO:0016747 AY555_RS08410 10e3a0585574192b1aa77cec2f257384 684 PANTHER PTHR23028:SF53 20 475 2.8E-81 T 14-09-2016 AY555_RS05805 ab512ac55b3c4a48c1d6de24f1644cb2 212 PANTHER PTHR30353 42 186 1.8E-13 T 14-09-2016 IPR032818 DedA family AY555_RS05805 ab512ac55b3c4a48c1d6de24f1644cb2 212 Pfam PF09335 SNARE associated Golgi protein 72 173 3.4E-8 T 14-09-2016 IPR032816 SNARE associated Golgi protein AY555_RS05805 ab512ac55b3c4a48c1d6de24f1644cb2 212 PANTHER PTHR30353:SF4 42 186 1.8E-13 T 14-09-2016 AY555_RS03570 f01b874545c645cc0273bab110954cee 136 SUPERFAMILY SSF47413 17 91 1.5E-26 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AY555_RS03570 f01b874545c645cc0273bab110954cee 136 Gene3D G3DSA:1.10.260.40 22 90 1.1E-16 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AY555_RS03570 f01b874545c645cc0273bab110954cee 136 SMART SM00530 28 83 4.4E-9 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AY555_RS03570 f01b874545c645cc0273bab110954cee 136 PANTHER PTHR10245:SF38 1 135 2.6E-27 T 14-09-2016 AY555_RS03570 f01b874545c645cc0273bab110954cee 136 PANTHER PTHR10245 1 135 2.6E-27 T 14-09-2016 AY555_RS03570 f01b874545c645cc0273bab110954cee 136 Pfam PF01381 Helix-turn-helix 38 83 7.5E-12 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AY555_RS02335 92b50d4e193f9e3bb5a81c5fd8d7429c 389 Pfam PF13401 AAA domain 40 168 7.6E-13 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS02335 92b50d4e193f9e3bb5a81c5fd8d7429c 389 PANTHER PTHR35894:SF1 4 256 1.3E-28 T 14-09-2016 AY555_RS02335 92b50d4e193f9e3bb5a81c5fd8d7429c 389 SMART SM00382 40 310 8.6E-5 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS02335 92b50d4e193f9e3bb5a81c5fd8d7429c 389 Gene3D G3DSA:3.40.50.300 31 163 2.4E-9 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS02335 92b50d4e193f9e3bb5a81c5fd8d7429c 389 PANTHER PTHR35894 4 256 1.3E-28 T 14-09-2016 AY555_RS02335 92b50d4e193f9e3bb5a81c5fd8d7429c 389 SUPERFAMILY SSF52540 5 251 9.83E-19 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS01500 703e9cea510012101b603ee2122b1872 423 PANTHER PTHR13847:SF210 4 416 1.1E-140 T 14-09-2016 AY555_RS01500 703e9cea510012101b603ee2122b1872 423 SUPERFAMILY SSF51905 343 417 3.11E-42 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS01500 703e9cea510012101b603ee2122b1872 423 SUPERFAMILY SSF51905 27 251 3.11E-42 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS01500 703e9cea510012101b603ee2122b1872 423 Pfam PF01266 FAD dependent oxidoreductase 29 379 3.4E-56 T 14-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AY555_RS01500 703e9cea510012101b603ee2122b1872 423 Gene3D G3DSA:3.50.50.60 343 390 2.1E-51 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS01500 703e9cea510012101b603ee2122b1872 423 Gene3D G3DSA:3.50.50.60 171 250 2.1E-51 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS01500 703e9cea510012101b603ee2122b1872 423 Gene3D G3DSA:3.50.50.60 17 118 2.1E-51 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS01500 703e9cea510012101b603ee2122b1872 423 PANTHER PTHR13847 4 416 1.1E-140 T 14-09-2016 AY555_RS09100 aef809554d021ea89b6ea7c36aacb7df 202 Gene3D G3DSA:3.20.20.370 1 188 2.4E-22 T 14-09-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AY555_RS09100 aef809554d021ea89b6ea7c36aacb7df 202 Pfam PF01522 Polysaccharide deacetylase 1 90 8.4E-14 T 14-09-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AY555_RS09100 aef809554d021ea89b6ea7c36aacb7df 202 SUPERFAMILY SSF88713 1 191 1.97E-24 T 14-09-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AY555_RS09100 aef809554d021ea89b6ea7c36aacb7df 202 PANTHER PTHR10587 1 191 1.9E-15 T 14-09-2016 AY555_RS01570 eeaf21bc4a81ea5b239cbade56fb243c 279 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 273 2.0E-46 T 14-09-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 AY555_RS01570 eeaf21bc4a81ea5b239cbade56fb243c 279 Gene3D G3DSA:3.90.800.10 67 188 5.7E-22 T 14-09-2016 AY555_RS01570 eeaf21bc4a81ea5b239cbade56fb243c 279 Gene3D G3DSA:3.40.50.620 192 241 2.7E-39 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS01570 eeaf21bc4a81ea5b239cbade56fb243c 279 Gene3D G3DSA:3.40.50.620 4 66 2.7E-39 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS01570 eeaf21bc4a81ea5b239cbade56fb243c 279 PANTHER PTHR11451:SF35 1 276 4.8E-42 T 14-09-2016 AY555_RS01570 eeaf21bc4a81ea5b239cbade56fb243c 279 SUPERFAMILY SSF52374 4 275 1.05E-77 T 14-09-2016 AY555_RS01570 eeaf21bc4a81ea5b239cbade56fb243c 279 PRINTS PR00987 Glutamyl-tRNA synthetase signature 206 214 6.9E-14 T 14-09-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AY555_RS01570 eeaf21bc4a81ea5b239cbade56fb243c 279 PRINTS PR00987 Glutamyl-tRNA synthetase signature 34 47 6.9E-14 T 14-09-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AY555_RS01570 eeaf21bc4a81ea5b239cbade56fb243c 279 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 6.9E-14 T 14-09-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AY555_RS01570 eeaf21bc4a81ea5b239cbade56fb243c 279 PRINTS PR00987 Glutamyl-tRNA synthetase signature 190 200 6.9E-14 T 14-09-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AY555_RS01570 eeaf21bc4a81ea5b239cbade56fb243c 279 PANTHER PTHR11451 1 276 4.8E-42 T 14-09-2016 AY555_RS01570 eeaf21bc4a81ea5b239cbade56fb243c 279 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 14-09-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS09625 d42db7869325407073b1e7758f0b040a 206 Pfam PF12697 Alpha/beta hydrolase family 14 198 2.6E-6 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AY555_RS09625 d42db7869325407073b1e7758f0b040a 206 Gene3D G3DSA:3.40.50.1820 52 204 3.6E-8 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AY555_RS09625 d42db7869325407073b1e7758f0b040a 206 SUPERFAMILY SSF53474 4 205 2.05E-17 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AY555_RS09625 d42db7869325407073b1e7758f0b040a 206 Gene3D G3DSA:3.40.50.1820 3 41 4.1E-4 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AY555_RS03830 398be5e7e95bf4469df96bac8836d4ef 275 Pfam PF03618 Kinase/pyrophosphorylase 9 265 2.3E-84 T 14-09-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 AY555_RS03830 398be5e7e95bf4469df96bac8836d4ef 275 PANTHER PTHR31756:SF3 9 272 9.2E-90 T 14-09-2016 AY555_RS03830 398be5e7e95bf4469df96bac8836d4ef 275 PANTHER PTHR31756 9 272 9.2E-90 T 14-09-2016 AY555_RS03830 398be5e7e95bf4469df96bac8836d4ef 275 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 7 271 51.453 T 14-09-2016 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein AY555_RS02210 eafbc6483c479d72d5d164a53784dce2 213 SUPERFAMILY SSF102114 45 141 3.34E-7 T 14-09-2016 AY555_RS02210 eafbc6483c479d72d5d164a53784dce2 213 Gene3D G3DSA:3.80.30.10 90 125 1.8E-7 T 14-09-2016 AY555_RS02210 eafbc6483c479d72d5d164a53784dce2 213 PIRSF PIRSF000370 1 213 1.3E-34 T 14-09-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 AY555_RS02210 eafbc6483c479d72d5d164a53784dce2 213 PANTHER PTHR11228 1 173 2.4E-23 T 14-09-2016 AY555_RS02210 eafbc6483c479d72d5d164a53784dce2 213 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 213 31.233 T 14-09-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 AY555_RS02210 eafbc6483c479d72d5d164a53784dce2 213 TIGRFAM TIGR04508 queE_Cx14CxxC: 7-carboxy-7-deazaguanine synthase 3 213 2.4E-101 T 14-09-2016 IPR030977 7-carboxy-7-deazaguanine synthase, Cx14CxxC-type GO:0008616|GO:0046872 KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 AY555_RS02210 eafbc6483c479d72d5d164a53784dce2 213 PANTHER PTHR11228:SF6 1 173 2.4E-23 T 14-09-2016 AY555_RS04285 72335d1d00282594e30887e60b09684b 113 Pfam PF09361 Phasin protein 8 105 6.2E-21 T 14-09-2016 IPR018968 Phasin AY555_RS04285 72335d1d00282594e30887e60b09684b 113 TIGRFAM TIGR01841 phasin: phasin family protein 27 111 7.4E-9 T 14-09-2016 IPR010127 Phasin, subfamily 1 AY555_RS04870 e2d8bcddd74c0f82fa22a435648c14c4 273 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 9 272 18.711 T 14-09-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 AY555_RS04870 e2d8bcddd74c0f82fa22a435648c14c4 273 PANTHER PTHR30589 1 271 3.5E-90 T 14-09-2016 AY555_RS04870 e2d8bcddd74c0f82fa22a435648c14c4 273 PANTHER PTHR30589:SF0 1 271 3.5E-90 T 14-09-2016 AY555_RS04870 e2d8bcddd74c0f82fa22a435648c14c4 273 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 145 157 - T 14-09-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 AY555_RS04870 e2d8bcddd74c0f82fa22a435648c14c4 273 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 2 271 6.5E-68 T 14-09-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 AY555_RS04870 e2d8bcddd74c0f82fa22a435648c14c4 273 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 12 267 1.8E-72 T 14-09-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 AY555_RS04085 42c2d1166ec3831486501428029014c9 319 PANTHER PTHR10314 9 318 7.2E-153 T 14-09-2016 AY555_RS04085 42c2d1166ec3831486501428029014c9 319 TIGRFAM TIGR01139 cysK: cysteine synthase A 17 316 1.2E-128 T 14-09-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 AY555_RS04085 42c2d1166ec3831486501428029014c9 319 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 18 304 1.0E-68 T 14-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AY555_RS04085 42c2d1166ec3831486501428029014c9 319 TIGRFAM TIGR01136 cysKM: cysteine synthase 17 316 1.2E-124 T 14-09-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 AY555_RS04085 42c2d1166ec3831486501428029014c9 319 PANTHER PTHR10314:SF110 9 318 7.2E-153 T 14-09-2016 AY555_RS04085 42c2d1166ec3831486501428029014c9 319 Gene3D G3DSA:3.40.50.1100 147 318 1.0E-71 T 14-09-2016 AY555_RS04085 42c2d1166ec3831486501428029014c9 319 SUPERFAMILY SSF53686 11 316 2.36E-99 T 14-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AY555_RS04085 42c2d1166ec3831486501428029014c9 319 Gene3D G3DSA:3.40.50.1100 49 146 3.1E-37 T 14-09-2016 AY555_RS04995 7ffaf94fcd6a66a49178e7dfd8c7c5e6 405 SUPERFAMILY SSF53383 6 399 1.83E-93 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AY555_RS04995 7ffaf94fcd6a66a49178e7dfd8c7c5e6 405 TIGRFAM TIGR03588 PseC: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 6 399 1.3E-133 T 14-09-2016 IPR020026 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase AY555_RS04995 7ffaf94fcd6a66a49178e7dfd8c7c5e6 405 Gene3D G3DSA:3.40.640.10 7 273 5.3E-64 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AY555_RS04995 7ffaf94fcd6a66a49178e7dfd8c7c5e6 405 PIRSF PIRSF000390 3 404 4.0E-97 T 14-09-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AY555_RS04995 7ffaf94fcd6a66a49178e7dfd8c7c5e6 405 PANTHER PTHR30244:SF3 1 228 8.9E-107 T 14-09-2016 AY555_RS04995 7ffaf94fcd6a66a49178e7dfd8c7c5e6 405 PANTHER PTHR30244:SF3 247 404 8.9E-107 T 14-09-2016 AY555_RS04995 7ffaf94fcd6a66a49178e7dfd8c7c5e6 405 Gene3D G3DSA:3.90.1150.10 276 400 7.1E-34 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AY555_RS04995 7ffaf94fcd6a66a49178e7dfd8c7c5e6 405 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 14 397 3.6E-97 T 14-09-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AY555_RS04995 7ffaf94fcd6a66a49178e7dfd8c7c5e6 405 PANTHER PTHR30244 1 228 8.9E-107 T 14-09-2016 AY555_RS04995 7ffaf94fcd6a66a49178e7dfd8c7c5e6 405 PANTHER PTHR30244 247 404 8.9E-107 T 14-09-2016 AY555_RS02105 0f61c6cf80354bc76e01bbd641fcbd58 271 PANTHER PTHR30413:SF2 18 271 2.0E-59 T 14-09-2016 AY555_RS02105 0f61c6cf80354bc76e01bbd641fcbd58 271 Pfam PF01061 ABC-2 type transporter 24 233 9.5E-31 T 14-09-2016 IPR013525 ABC-2 type transporter GO:0016020 AY555_RS02105 0f61c6cf80354bc76e01bbd641fcbd58 271 PIRSF PIRSF006648 3 266 3.3E-21 T 14-09-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AY555_RS02105 0f61c6cf80354bc76e01bbd641fcbd58 271 PRINTS PR00164 ABC-2 type transport system membrane protein signature 191 210 1.5E-7 T 14-09-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AY555_RS02105 0f61c6cf80354bc76e01bbd641fcbd58 271 PRINTS PR00164 ABC-2 type transport system membrane protein signature 211 230 1.5E-7 T 14-09-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AY555_RS02105 0f61c6cf80354bc76e01bbd641fcbd58 271 PRINTS PR00164 ABC-2 type transport system membrane protein signature 73 95 1.5E-7 T 14-09-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AY555_RS02105 0f61c6cf80354bc76e01bbd641fcbd58 271 PANTHER PTHR30413 18 271 2.0E-59 T 14-09-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AY555_RS08940 42a53dbb26eb5d8c9726b4cba849f2af 740 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 280 477 4.2E-24 T 14-09-2016 IPR004477 ComEC/Rec2-related protein AY555_RS08940 42a53dbb26eb5d8c9726b4cba849f2af 740 Pfam PF13567 Domain of unknown function (DUF4131) 53 213 1.3E-13 T 14-09-2016 IPR025405 Domain of unknown function DUF4131 AY555_RS08940 42a53dbb26eb5d8c9726b4cba849f2af 740 PANTHER PTHR30619 42 591 6.1E-62 T 14-09-2016 AY555_RS08940 42a53dbb26eb5d8c9726b4cba849f2af 740 PANTHER PTHR30619:SF2 42 591 6.1E-62 T 14-09-2016 AY555_RS08940 42a53dbb26eb5d8c9726b4cba849f2af 740 Pfam PF03772 Competence protein 258 545 2.4E-60 T 14-09-2016 IPR004477 ComEC/Rec2-related protein AY555_RS08345 7cef555abced851b1475f8182f793420 128 SUPERFAMILY SSF64076 4 128 1.57E-36 T 14-09-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein AY555_RS08345 7cef555abced851b1475f8182f793420 128 Gene3D G3DSA:3.40.1230.10 3 127 9.7E-38 T 14-09-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein AY555_RS08345 7cef555abced851b1475f8182f793420 128 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 18 125 4.1E-28 T 14-09-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein AY555_RS08345 7cef555abced851b1475f8182f793420 128 PANTHER PTHR21192 5 127 1.1E-24 T 14-09-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein AY555_RS04730 664ed6210e02cc19d9e9da4f3695a191 529 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 512 529 - T 14-09-2016 IPR010917 TonB-dependent receptor, conserved site AY555_RS04730 664ed6210e02cc19d9e9da4f3695a191 529 PANTHER PTHR32552:SF27 1 529 3.2E-49 T 14-09-2016 AY555_RS04730 664ed6210e02cc19d9e9da4f3695a191 529 Gene3D G3DSA:2.40.170.20 19 529 1.9E-94 T 14-09-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AY555_RS04730 664ed6210e02cc19d9e9da4f3695a191 529 Gene3D G3DSA:2.170.130.10 1 18 1.3E-4 T 14-09-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AY555_RS04730 664ed6210e02cc19d9e9da4f3695a191 529 PANTHER PTHR32552 1 529 3.2E-49 T 14-09-2016 AY555_RS04730 664ed6210e02cc19d9e9da4f3695a191 529 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 1 529 3.1E-131 T 14-09-2016 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 AY555_RS04730 664ed6210e02cc19d9e9da4f3695a191 529 Pfam PF00593 TonB dependent receptor 287 525 4.1E-35 T 14-09-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AY555_RS04730 664ed6210e02cc19d9e9da4f3695a191 529 SUPERFAMILY SSF56935 1 529 1.83E-87 T 14-09-2016 AY555_RS02450 32f2cbc673657f02a5e6ec8212e6664a 320 Pfam PF11906 Protein of unknown function (DUF3426) 165 296 8.1E-12 T 14-09-2016 IPR021834 Protein of unknown function DUF3426 AY555_RS00260 78e51367a6a4f249856b4670628be653 545 Gene3D G3DSA:3.50.50.60 6 278 3.5E-42 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS00260 78e51367a6a4f249856b4670628be653 545 PANTHER PTHR10617 1 467 1.6E-294 T 14-09-2016 AY555_RS00260 78e51367a6a4f249856b4670628be653 545 SUPERFAMILY SSF54862 444 545 3.05E-28 T 14-09-2016 AY555_RS00260 78e51367a6a4f249856b4670628be653 545 SUPERFAMILY SSF51905 2 206 2.39E-57 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS00260 78e51367a6a4f249856b4670628be653 545 SUPERFAMILY SSF51905 303 442 2.39E-57 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS00260 78e51367a6a4f249856b4670628be653 545 PANTHER PTHR10617:SF107 1 467 1.6E-294 T 14-09-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 AY555_RS00260 78e51367a6a4f249856b4670628be653 545 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 440 542 2.3E-49 T 14-09-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 AY555_RS00260 78e51367a6a4f249856b4670628be653 545 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 57 2.7E-6 T 14-09-2016 AY555_RS00260 78e51367a6a4f249856b4670628be653 545 SUPERFAMILY SSF54373 207 303 2.0E-37 T 14-09-2016 AY555_RS05145 7636180e802232820761c8ab57c08590 307 PANTHER PTHR10366:SF430 3 299 5.2E-72 T 14-09-2016 AY555_RS05145 7636180e802232820761c8ab57c08590 307 Gene3D G3DSA:3.40.50.720 5 286 4.8E-28 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS05145 7636180e802232820761c8ab57c08590 307 SUPERFAMILY SSF51735 9 292 2.99E-35 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS05145 7636180e802232820761c8ab57c08590 307 PANTHER PTHR10366 3 299 5.2E-72 T 14-09-2016 AY555_RS05760 cc2d5ee1d2a3f5d8f153609dcdb5e70c 526 Pfam PF01636 Phosphotransferase enzyme family 132 262 7.6E-8 T 14-09-2016 IPR002575 Aminoglycoside phosphotransferase AY555_RS05760 cc2d5ee1d2a3f5d8f153609dcdb5e70c 526 PANTHER PTHR12083 404 485 4.3E-106 T 14-09-2016 AY555_RS05760 cc2d5ee1d2a3f5d8f153609dcdb5e70c 526 PANTHER PTHR12083 15 379 4.3E-106 T 14-09-2016 AY555_RS05760 cc2d5ee1d2a3f5d8f153609dcdb5e70c 526 Gene3D G3DSA:3.40.50.300 340 481 6.3E-16 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS05760 cc2d5ee1d2a3f5d8f153609dcdb5e70c 526 Pfam PF13671 AAA domain 343 485 2.8E-20 T 14-09-2016 AY555_RS05760 cc2d5ee1d2a3f5d8f153609dcdb5e70c 526 SUPERFAMILY SSF56112 7 337 3.06E-23 T 14-09-2016 IPR011009 Protein kinase-like domain AY555_RS05760 cc2d5ee1d2a3f5d8f153609dcdb5e70c 526 PANTHER PTHR12083:SF8 15 379 4.3E-106 T 14-09-2016 AY555_RS05760 cc2d5ee1d2a3f5d8f153609dcdb5e70c 526 PANTHER PTHR12083:SF8 404 485 4.3E-106 T 14-09-2016 AY555_RS05760 cc2d5ee1d2a3f5d8f153609dcdb5e70c 526 SUPERFAMILY SSF52540 340 470 6.59E-18 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS05760 cc2d5ee1d2a3f5d8f153609dcdb5e70c 526 Gene3D G3DSA:3.90.1200.10 185 289 4.2E-7 T 14-09-2016 AY555_RS09445 b7aa4b9e65b0889b6a0a8f61b14c6b2e 515 Gene3D G3DSA:3.40.50.300 8 249 4.7E-32 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS09445 b7aa4b9e65b0889b6a0a8f61b14c6b2e 515 Gene3D G3DSA:1.10.10.10 449 497 5.1E-4 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS09445 b7aa4b9e65b0889b6a0a8f61b14c6b2e 515 SUPERFAMILY SSF52540 7 251 2.49E-28 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS09445 b7aa4b9e65b0889b6a0a8f61b14c6b2e 515 Pfam PF01935 Domain of unknown function DUF87 9 75 1.4E-10 T 14-09-2016 IPR002789 Helicase HerA, central domain AY555_RS09445 b7aa4b9e65b0889b6a0a8f61b14c6b2e 515 PIRSF PIRSF034081 1 515 2.4E-218 T 14-09-2016 IPR014588 ATPase, Atu1862 type, predicted AY555_RS05990 3d367bf606d9beb2ae6e734469655a41 328 SUPERFAMILY SSF158682 223 324 9.81E-8 T 14-09-2016 IPR029024 TerB-like AY555_RS05990 3d367bf606d9beb2ae6e734469655a41 328 Gene3D G3DSA:1.10.3680.10 223 321 4.4E-4 T 14-09-2016 IPR029024 TerB-like AY555_RS09210 80caa51ea5f7cdc83c4cc25a6019cda0 93 Pfam PF06568 Domain of unknown function (DUF1127) 58 81 1.3E-4 T 14-09-2016 IPR009506 Protein of unknown function DUF1127 AY555_RS03025 7da2228edc205cfa74522f1abf6dd321 133 SUPERFAMILY SSF53062 1 130 4.84E-37 T 14-09-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AY555_RS03025 7da2228edc205cfa74522f1abf6dd321 133 PANTHER PTHR33799 2 132 3.2E-41 T 14-09-2016 AY555_RS03025 7da2228edc205cfa74522f1abf6dd321 133 Gene3D G3DSA:3.40.50.510 1 130 2.1E-41 T 14-09-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AY555_RS03025 7da2228edc205cfa74522f1abf6dd321 133 Pfam PF03610 PTS system fructose IIA component 3 112 1.1E-27 T 14-09-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AY555_RS08115 870de49e9d45bdbc10109857d2534a66 167 Pfam PF04608 Phosphatidylglycerophosphatase A 16 158 2.7E-46 T 14-09-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 AY555_RS08115 870de49e9d45bdbc10109857d2534a66 167 PIRSF PIRSF006162 4 166 4.0E-45 T 14-09-2016 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 AY555_RS08115 870de49e9d45bdbc10109857d2534a66 167 SUPERFAMILY SSF101307 14 160 2.88E-35 T 14-09-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 AY555_RS08115 870de49e9d45bdbc10109857d2534a66 167 PANTHER PTHR36305 1 165 1.3E-47 T 14-09-2016 AY555_RS04270 dcb9b2d1f6692803787c7b5e0d7705e5 260 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AY555_RS04270 dcb9b2d1f6692803787c7b5e0d7705e5 260 Pfam PF00005 ABC transporter 25 184 9.3E-33 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AY555_RS04270 dcb9b2d1f6692803787c7b5e0d7705e5 260 SUPERFAMILY SSF52540 11 254 3.19E-73 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04270 dcb9b2d1f6692803787c7b5e0d7705e5 260 SMART SM00382 34 232 1.2E-12 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS04270 dcb9b2d1f6692803787c7b5e0d7705e5 260 PANTHER PTHR24220:SF472 11 258 4.7E-137 T 14-09-2016 AY555_RS04270 dcb9b2d1f6692803787c7b5e0d7705e5 260 PIRSF PIRSF039085 6 260 2.9E-112 T 14-09-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AY555_RS04270 dcb9b2d1f6692803787c7b5e0d7705e5 260 Gene3D G3DSA:3.40.50.300 10 256 8.8E-80 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04270 dcb9b2d1f6692803787c7b5e0d7705e5 260 PANTHER PTHR24220 11 258 4.7E-137 T 14-09-2016 AY555_RS04165 e7fe454d9bdaead2db2827ad8a79d973 232 Pfam PF02390 Putative methyltransferase 56 219 1.6E-33 T 14-09-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 AY555_RS04165 e7fe454d9bdaead2db2827ad8a79d973 232 SUPERFAMILY SSF53335 53 227 1.49E-22 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS04165 e7fe454d9bdaead2db2827ad8a79d973 232 PANTHER PTHR23417 7 219 2.8E-39 T 14-09-2016 AY555_RS04165 e7fe454d9bdaead2db2827ad8a79d973 232 Gene3D G3DSA:3.40.50.150 56 226 4.4E-5 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS04165 e7fe454d9bdaead2db2827ad8a79d973 232 PANTHER PTHR23417:SF14 7 219 2.8E-39 T 14-09-2016 AY555_RS04165 e7fe454d9bdaead2db2827ad8a79d973 232 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 11 229 25.412 T 14-09-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 AY555_RS09130 9de0a1568bd3f4acb3a466dc00e5ae70 153 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 9 149 24.135 T 14-09-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AY555_RS09130 9de0a1568bd3f4acb3a466dc00e5ae70 153 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 13 146 3.9E-33 T 14-09-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AY555_RS09130 9de0a1568bd3f4acb3a466dc00e5ae70 153 PANTHER PTHR33317 9 148 1.9E-36 T 14-09-2016 AY555_RS09130 9de0a1568bd3f4acb3a466dc00e5ae70 153 Gene3D G3DSA:3.30.420.140 9 148 2.0E-44 T 14-09-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 AY555_RS09130 9de0a1568bd3f4acb3a466dc00e5ae70 153 PANTHER PTHR33317:SF1 9 148 1.9E-36 T 14-09-2016 AY555_RS09130 9de0a1568bd3f4acb3a466dc00e5ae70 153 SMART SM00732 9 113 2.8E-34 T 14-09-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 AY555_RS09130 9de0a1568bd3f4acb3a466dc00e5ae70 153 SUPERFAMILY SSF53098 9 147 5.61E-37 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AY555_RS09130 9de0a1568bd3f4acb3a466dc00e5ae70 153 Pfam PF03652 Holliday junction resolvase 10 146 1.6E-39 T 14-09-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AY555_RS04845 b4cf7db143d657d9b2f7266fa038732e 134 Pfam PF09361 Phasin protein 30 127 1.3E-21 T 14-09-2016 IPR018968 Phasin AY555_RS04845 b4cf7db143d657d9b2f7266fa038732e 134 TIGRFAM TIGR01841 phasin: phasin family protein 49 134 4.3E-24 T 14-09-2016 IPR010127 Phasin, subfamily 1 AY555_RS04775 59cbd2f5101efd8f07525b171b5f7f4f 973 Pfam PF02779 Transketolase, pyrimidine binding domain 606 801 5.0E-63 T 14-09-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AY555_RS04775 59cbd2f5101efd8f07525b171b5f7f4f 973 PANTHER PTHR23152:SF4 4 961 0.0 T 14-09-2016 AY555_RS04775 59cbd2f5101efd8f07525b171b5f7f4f 973 Gene3D G3DSA:3.40.50.970 661 806 1.0E-21 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AY555_RS04775 59cbd2f5101efd8f07525b171b5f7f4f 973 Gene3D G3DSA:3.40.50.970 169 558 4.2E-77 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AY555_RS04775 59cbd2f5101efd8f07525b171b5f7f4f 973 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 805 952 2.3E-50 T 14-09-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AY555_RS04775 59cbd2f5101efd8f07525b171b5f7f4f 973 PIRSF PIRSF000157 1 954 0.0 T 14-09-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AY555_RS04775 59cbd2f5101efd8f07525b171b5f7f4f 973 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 4 41 1.5E-15 T 14-09-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AY555_RS04775 59cbd2f5101efd8f07525b171b5f7f4f 973 SUPERFAMILY SSF52518 592 806 7.57E-50 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AY555_RS04775 59cbd2f5101efd8f07525b171b5f7f4f 973 SMART SM00861 607 800 1.2E-59 T 14-09-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AY555_RS04775 59cbd2f5101efd8f07525b171b5f7f4f 973 SUPERFAMILY SSF52518 128 555 1.41E-86 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AY555_RS04775 59cbd2f5101efd8f07525b171b5f7f4f 973 PANTHER PTHR23152 4 961 0.0 T 14-09-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AY555_RS04775 59cbd2f5101efd8f07525b171b5f7f4f 973 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 5 951 0.0 T 14-09-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AY555_RS04775 59cbd2f5101efd8f07525b171b5f7f4f 973 Pfam PF00676 Dehydrogenase E1 component 221 538 2.2E-59 T 14-09-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 AY555_RS01750 e7b6b80c13cf5538881ac1bfc5484095 382 SUPERFAMILY SSF117892 153 269 2.62E-22 T 14-09-2016 IPR001107 Band 7 domain AY555_RS01750 e7b6b80c13cf5538881ac1bfc5484095 382 PANTHER PTHR10264:SF51 156 376 2.8E-106 T 14-09-2016 IPR010201 HflK GO:0016021 AY555_RS01750 e7b6b80c13cf5538881ac1bfc5484095 382 SMART SM00244 78 262 6.7E-26 T 14-09-2016 IPR001107 Band 7 domain AY555_RS01750 e7b6b80c13cf5538881ac1bfc5484095 382 PANTHER PTHR10264 156 376 2.8E-106 T 14-09-2016 IPR001972 Stomatin family GO:0016020 AY555_RS01750 e7b6b80c13cf5538881ac1bfc5484095 382 PANTHER PTHR10264 6 133 2.8E-106 T 14-09-2016 IPR001972 Stomatin family GO:0016020 AY555_RS01750 e7b6b80c13cf5538881ac1bfc5484095 382 Pfam PF01145 SPFH domain / Band 7 family 82 277 2.0E-28 T 14-09-2016 IPR001107 Band 7 domain AY555_RS01750 e7b6b80c13cf5538881ac1bfc5484095 382 PANTHER PTHR10264:SF51 6 133 2.8E-106 T 14-09-2016 IPR010201 HflK GO:0016021 AY555_RS01750 e7b6b80c13cf5538881ac1bfc5484095 382 TIGRFAM TIGR01933 hflK: HflK protein 81 355 9.6E-82 T 14-09-2016 IPR010201 HflK GO:0016021 AY555_RS01750 e7b6b80c13cf5538881ac1bfc5484095 382 Pfam PF12221 Bacterial membrane protein N terminal 1 57 6.7E-5 T 14-09-2016 IPR020980 Menbrane protein HflK, N-terminal AY555_RS02775 bec8d33fd74930da991a387f28644af8 498 Pfam PF04984 Phage tail sheath protein 11 490 3.9E-60 T 14-09-2016 IPR007067 Tail sheath protein AY555_RS02775 bec8d33fd74930da991a387f28644af8 498 PIRSF PIRSF007349 1 492 7.6E-180 T 14-09-2016 IPR007067 Tail sheath protein AY555_RS03520 c6339863b6505ede84778226abde7321 233 Gene3D G3DSA:1.20.144.10 60 216 2.1E-14 T 14-09-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AY555_RS03520 c6339863b6505ede84778226abde7321 233 SUPERFAMILY SSF48317 13 220 5.49E-17 T 14-09-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AY555_RS03520 c6339863b6505ede84778226abde7321 233 Pfam PF01569 PAP2 superfamily 97 220 4.0E-15 T 14-09-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AY555_RS08595 dc646b86439868f141a30118739c441a 178 Pfam PF00436 Single-strand binding protein family 5 105 5.7E-40 T 14-09-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 AY555_RS08595 dc646b86439868f141a30118739c441a 178 SUPERFAMILY SSF50249 4 178 7.54E-52 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS08595 dc646b86439868f141a30118739c441a 178 PANTHER PTHR10302 1 178 7.9E-48 T 14-09-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 AY555_RS08595 dc646b86439868f141a30118739c441a 178 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 178 8.3E-49 T 14-09-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 AY555_RS08595 dc646b86439868f141a30118739c441a 178 Gene3D G3DSA:2.40.50.140 2 178 3.0E-53 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS08595 dc646b86439868f141a30118739c441a 178 Hamap MF_00984 Single-stranded DNA-binding protein. 5 118 36.232 T 14-09-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 AY555_RS11170 f2531efaf1b115df4dc75fd6a68a4705 220 Pfam PF01619 Proline dehydrogenase 6 43 2.6E-11 T 14-09-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|UniPathway: UPA00261 AY555_RS11170 f2531efaf1b115df4dc75fd6a68a4705 220 Gene3D G3DSA:3.20.20.220 6 84 3.4E-18 T 14-09-2016 IPR029041 FAD-linked oxidoreductase-like AY555_RS11170 f2531efaf1b115df4dc75fd6a68a4705 220 Gene3D G3DSA:3.40.605.10 99 220 2.2E-25 T 14-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AY555_RS11170 f2531efaf1b115df4dc75fd6a68a4705 220 SUPERFAMILY SSF53720 100 220 8.77E-22 T 14-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AY555_RS11170 f2531efaf1b115df4dc75fd6a68a4705 220 PANTHER PTHR11699 95 220 3.4E-30 T 14-09-2016 AY555_RS11170 f2531efaf1b115df4dc75fd6a68a4705 220 Pfam PF00171 Aldehyde dehydrogenase family 127 220 8.5E-20 T 14-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AY555_RS11170 f2531efaf1b115df4dc75fd6a68a4705 220 SUPERFAMILY SSF51730 6 85 4.71E-22 T 14-09-2016 IPR029041 FAD-linked oxidoreductase-like AY555_RS06240 c57277892f9ecc49d5778c12b9661c90 416 Pfam PF11741 AMIN domain 33 128 2.5E-13 T 14-09-2016 IPR021731 AMIN domain AY555_RS06240 c57277892f9ecc49d5778c12b9661c90 416 PANTHER PTHR30404:SF0 34 408 4.6E-82 T 14-09-2016 AY555_RS06240 c57277892f9ecc49d5778c12b9661c90 416 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 190 404 1.0E-46 T 14-09-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 AY555_RS06240 c57277892f9ecc49d5778c12b9661c90 416 Gene3D G3DSA:3.40.630.40 188 285 3.3E-56 T 14-09-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 AY555_RS06240 c57277892f9ecc49d5778c12b9661c90 416 Gene3D G3DSA:3.40.630.40 332 408 3.3E-56 T 14-09-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 AY555_RS06240 c57277892f9ecc49d5778c12b9661c90 416 SMART SM00646 250 404 1.6E-42 T 14-09-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 AY555_RS06240 c57277892f9ecc49d5778c12b9661c90 416 PANTHER PTHR30404 34 408 4.6E-82 T 14-09-2016 AY555_RS06240 c57277892f9ecc49d5778c12b9661c90 416 SUPERFAMILY SSF53187 188 284 1.44E-51 T 14-09-2016 AY555_RS06240 c57277892f9ecc49d5778c12b9661c90 416 SUPERFAMILY SSF53187 331 407 1.44E-51 T 14-09-2016 AY555_RS00070 1511a5a4e9717c0f0f341ca171d02226 135 PIRSF PIRSF002889 1 135 1.1E-17 T 14-09-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 AY555_RS00070 1511a5a4e9717c0f0f341ca171d02226 135 PANTHER PTHR30435:SF12 3 132 1.1E-17 T 14-09-2016 AY555_RS00070 1511a5a4e9717c0f0f341ca171d02226 135 PANTHER PTHR30435 3 132 1.1E-17 T 14-09-2016 AY555_RS00500 e9a5fe9ffec046e916cded6ede67929c 436 Gene3D G3DSA:3.10.50.40 189 301 2.6E-25 T 14-09-2016 AY555_RS00500 e9a5fe9ffec046e916cded6ede67929c 436 Gene3D G3DSA:3.10.50.40 302 412 2.2E-8 T 14-09-2016 AY555_RS00500 e9a5fe9ffec046e916cded6ede67929c 436 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 226 246 - T 14-09-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site AY555_RS00500 e9a5fe9ffec046e916cded6ede67929c 436 SUPERFAMILY SSF54534 300 396 4.38E-8 T 14-09-2016 AY555_RS00500 e9a5fe9ffec046e916cded6ede67929c 436 SUPERFAMILY SSF54534 188 289 5.3E-22 T 14-09-2016 AY555_RS00500 e9a5fe9ffec046e916cded6ede67929c 436 PANTHER PTHR10657 46 305 4.6E-30 T 14-09-2016 AY555_RS00500 e9a5fe9ffec046e916cded6ede67929c 436 Pfam PF13624 SurA N-terminal domain 38 155 5.4E-11 T 14-09-2016 AY555_RS00500 e9a5fe9ffec046e916cded6ede67929c 436 Pfam PF00639 PPIC-type PPIASE domain 200 285 7.2E-18 T 14-09-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 AY555_RS00500 e9a5fe9ffec046e916cded6ede67929c 436 SUPERFAMILY SSF109998 46 214 5.49E-25 T 14-09-2016 IPR027304 Trigger factor/SurA domain AY555_RS00500 e9a5fe9ffec046e916cded6ede67929c 436 PANTHER PTHR10657:SF11 46 305 4.6E-30 T 14-09-2016 AY555_RS05465 2f619b28b7ba7f66021e24487ed6f0be 96 SUPERFAMILY SSF53335 14 91 2.58E-5 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS05465 2f619b28b7ba7f66021e24487ed6f0be 96 Gene3D G3DSA:3.40.50.150 20 91 1.2E-4 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS05620 cebf62c3733f2c4144426e13c1db8f20 297 SUPERFAMILY SSF58104 146 286 2.96E-9 T 14-09-2016 AY555_RS05620 cebf62c3733f2c4144426e13c1db8f20 297 Gene3D G3DSA:1.10.287.950 145 265 3.7E-8 T 14-09-2016 AY555_RS08775 a70d11ad7c08f6b8db02832a56edfaf8 233 Gene3D G3DSA:3.40.50.150 63 180 7.8E-14 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS08775 a70d11ad7c08f6b8db02832a56edfaf8 233 Pfam PF13649 Methyltransferase domain 76 166 1.2E-6 T 14-09-2016 AY555_RS08775 a70d11ad7c08f6b8db02832a56edfaf8 233 SUPERFAMILY SSF53335 38 188 3.95E-18 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS06630 a1e57cea756044dd72a4f486e9caacbe 174 PIRSF PIRSF032146 14 174 3.8E-58 T 14-09-2016 IPR008321 Uncharacterised conserved protein UCP032146 AY555_RS06630 a1e57cea756044dd72a4f486e9caacbe 174 Pfam PF06793 Uncharacterised protein family (UPF0262) 20 173 3.2E-61 T 14-09-2016 IPR008321 Uncharacterised conserved protein UCP032146 AY555_RS00870 402953d7f1e90b059484614340742535 161 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 148 8.6E-47 T 14-09-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 AY555_RS00870 402953d7f1e90b059484614340742535 161 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 151 20.496 T 14-09-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 AY555_RS00870 402953d7f1e90b059484614340742535 161 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 27 149 1.6E-36 T 14-09-2016 IPR021131 Ribosomal protein L18e/L15P AY555_RS00870 402953d7f1e90b059484614340742535 161 PANTHER PTHR12934 1 151 5.2E-69 T 14-09-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 AY555_RS00870 402953d7f1e90b059484614340742535 161 SUPERFAMILY SSF52080 4 149 1.57E-44 T 14-09-2016 IPR021131 Ribosomal protein L18e/L15P AY555_RS00870 402953d7f1e90b059484614340742535 161 Gene3D G3DSA:3.100.10.10 32 151 3.7E-26 T 14-09-2016 AY555_RS08780 c5bed92951480dce80cfdf5b18dfc408 68 Gene3D G3DSA:1.20.5.300 2 51 6.2E-7 T 14-09-2016 AY555_RS08780 c5bed92951480dce80cfdf5b18dfc408 68 Pfam PF04102 SlyX 9 68 7.4E-17 T 14-09-2016 IPR007236 SlyX AY555_RS05980 525666111b6fbfa24f1c909120f9422c 386 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 331 355 - T 14-09-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 AY555_RS05980 525666111b6fbfa24f1c909120f9422c 386 PANTHER PTHR30474:SF1 5 374 1.0E-139 T 14-09-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 AY555_RS05980 525666111b6fbfa24f1c909120f9422c 386 Pfam PF01098 Cell cycle protein 27 373 5.3E-102 T 14-09-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 AY555_RS05980 525666111b6fbfa24f1c909120f9422c 386 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 26 373 7.1E-131 T 14-09-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 AY555_RS05980 525666111b6fbfa24f1c909120f9422c 386 PANTHER PTHR30474 5 374 1.0E-139 T 14-09-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 AY555_RS06925 dae5636cf71136ea19b5867322da3b85 297 Pfam PF00753 Metallo-beta-lactamase superfamily 39 225 1.8E-9 T 14-09-2016 IPR001279 Metallo-beta-lactamase AY555_RS06925 dae5636cf71136ea19b5867322da3b85 297 Gene3D G3DSA:3.60.15.10 30 254 2.3E-36 T 14-09-2016 IPR001279 Metallo-beta-lactamase AY555_RS06925 dae5636cf71136ea19b5867322da3b85 297 PANTHER PTHR11935 1 295 1.1E-87 T 14-09-2016 AY555_RS06925 dae5636cf71136ea19b5867322da3b85 297 PANTHER PTHR11935:SF5 1 295 1.1E-87 T 14-09-2016 AY555_RS06925 dae5636cf71136ea19b5867322da3b85 297 SUPERFAMILY SSF56281 25 249 1.02E-39 T 14-09-2016 IPR001279 Metallo-beta-lactamase AY555_RS06925 dae5636cf71136ea19b5867322da3b85 297 SMART SM00849 40 225 1.1E-18 T 14-09-2016 IPR001279 Metallo-beta-lactamase AY555_RS03455 35195504cb1c98f1abb6fd31f5d05dba 162 PANTHER PTHR30295:SF9 1 154 2.2E-48 T 14-09-2016 AY555_RS03455 35195504cb1c98f1abb6fd31f5d05dba 162 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 14-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AY555_RS03455 35195504cb1c98f1abb6fd31f5d05dba 162 PANTHER PTHR30295 1 154 2.2E-48 T 14-09-2016 AY555_RS03455 35195504cb1c98f1abb6fd31f5d05dba 162 TIGRFAM TIGR00754 bfr: bacterioferritin 1 155 1.5E-68 T 14-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AY555_RS03455 35195504cb1c98f1abb6fd31f5d05dba 162 PIRSF PIRSF002560 1 157 2.9E-66 T 14-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AY555_RS03455 35195504cb1c98f1abb6fd31f5d05dba 162 Pfam PF00210 Ferritin-like domain 8 143 2.5E-30 T 14-09-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AY555_RS03455 35195504cb1c98f1abb6fd31f5d05dba 162 Gene3D G3DSA:1.20.1260.10 1 155 9.8E-55 T 14-09-2016 IPR012347 Ferritin-related AY555_RS03455 35195504cb1c98f1abb6fd31f5d05dba 162 PRINTS PR00601 Bacterioferritin signature 65 85 3.6E-61 T 14-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AY555_RS03455 35195504cb1c98f1abb6fd31f5d05dba 162 PRINTS PR00601 Bacterioferritin signature 128 149 3.6E-61 T 14-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AY555_RS03455 35195504cb1c98f1abb6fd31f5d05dba 162 PRINTS PR00601 Bacterioferritin signature 107 127 3.6E-61 T 14-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AY555_RS03455 35195504cb1c98f1abb6fd31f5d05dba 162 PRINTS PR00601 Bacterioferritin signature 44 64 3.6E-61 T 14-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AY555_RS03455 35195504cb1c98f1abb6fd31f5d05dba 162 PRINTS PR00601 Bacterioferritin signature 86 106 3.6E-61 T 14-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AY555_RS03455 35195504cb1c98f1abb6fd31f5d05dba 162 PRINTS PR00601 Bacterioferritin signature 3 22 3.6E-61 T 14-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AY555_RS03455 35195504cb1c98f1abb6fd31f5d05dba 162 PRINTS PR00601 Bacterioferritin signature 23 43 3.6E-61 T 14-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AY555_RS03455 35195504cb1c98f1abb6fd31f5d05dba 162 SUPERFAMILY SSF47240 1 154 1.16E-46 T 14-09-2016 IPR009078 Ferritin-like superfamily AY555_RS08160 72846a18ee86fa3abb51b51b2eebf31c 156 Pfam PF03477 ATP cone domain 50 136 1.3E-16 T 14-09-2016 IPR005144 ATP-cone domain AY555_RS08160 72846a18ee86fa3abb51b51b2eebf31c 156 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 154 83.156 T 14-09-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AY555_RS08160 72846a18ee86fa3abb51b51b2eebf31c 156 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 146 2.4E-50 T 14-09-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AY555_RS08160 72846a18ee86fa3abb51b51b2eebf31c 156 PANTHER PTHR30455 2 156 4.9E-60 T 14-09-2016 AY555_RS08160 72846a18ee86fa3abb51b51b2eebf31c 156 PANTHER PTHR30455:SF2 2 156 4.9E-60 T 14-09-2016 AY555_RS04410 05e323bdbddabe1fe7fb75935e8dd1b9 514 SUPERFAMILY SSF56112 190 429 1.05E-40 T 14-09-2016 IPR011009 Protein kinase-like domain AY555_RS04410 05e323bdbddabe1fe7fb75935e8dd1b9 514 SUPERFAMILY SSF56112 92 155 1.05E-40 T 14-09-2016 IPR011009 Protein kinase-like domain AY555_RS04410 05e323bdbddabe1fe7fb75935e8dd1b9 514 Pfam PF03109 ABC1 family 110 227 3.9E-34 T 14-09-2016 IPR004147 UbiB domain AY555_RS04410 05e323bdbddabe1fe7fb75935e8dd1b9 514 PANTHER PTHR10566 42 435 5.5E-160 T 14-09-2016 AY555_RS04410 05e323bdbddabe1fe7fb75935e8dd1b9 514 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 9 437 1.5E-168 T 14-09-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 AY555_RS04410 05e323bdbddabe1fe7fb75935e8dd1b9 514 Gene3D G3DSA:3.90.1200.10 257 309 1.9E-7 T 14-09-2016 AY555_RS04410 05e323bdbddabe1fe7fb75935e8dd1b9 514 PANTHER PTHR10566:SF79 42 435 5.5E-160 T 14-09-2016 AY555_RS10855 45768de6b69c6514d1b3b6a1b6daf45c 134 SUPERFAMILY SSF52540 4 126 1.2E-8 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS10855 45768de6b69c6514d1b3b6a1b6daf45c 134 Pfam PF16193 AAA C-terminal domain 56 129 1.2E-17 T 14-09-2016 IPR032423 AAA ATPase, C-terminal domain AY555_RS10855 45768de6b69c6514d1b3b6a1b6daf45c 134 Gene3D G3DSA:1.10.8.60 16 87 3.6E-5 T 14-09-2016 AY555_RS10855 45768de6b69c6514d1b3b6a1b6daf45c 134 PANTHER PTHR13779:SF7 1 134 2.6E-40 T 14-09-2016 AY555_RS10855 45768de6b69c6514d1b3b6a1b6daf45c 134 Gene3D G3DSA:1.20.272.10 111 134 1.1E-6 T 14-09-2016 AY555_RS10855 45768de6b69c6514d1b3b6a1b6daf45c 134 PANTHER PTHR13779 1 134 2.6E-40 T 14-09-2016 AY555_RS07025 86df6633492ce4170f43396ce57c576b 177 Pfam PF00583 Acetyltransferase (GNAT) family 77 131 1.0E-7 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AY555_RS07025 86df6633492ce4170f43396ce57c576b 177 Gene3D G3DSA:3.40.630.30 7 138 2.6E-14 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AY555_RS07025 86df6633492ce4170f43396ce57c576b 177 SUPERFAMILY SSF55729 9 138 1.54E-12 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AY555_RS00730 860e825c5f288fabfd27fffa37609a21 176 Gene3D G3DSA:1.20.120.160 50 142 6.7E-7 T 14-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AY555_RS00730 860e825c5f288fabfd27fffa37609a21 176 Pfam PF01627 Hpt domain 54 122 1.3E-4 T 14-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AY555_RS00730 860e825c5f288fabfd27fffa37609a21 176 SUPERFAMILY SSF47226 50 156 3.01E-11 T 14-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AY555_RS08895 e51d33cdd516256547532d48dec5f62b 624 PANTHER PTHR10657 242 506 4.0E-55 T 14-09-2016 AY555_RS08895 e51d33cdd516256547532d48dec5f62b 624 PANTHER PTHR10657 1 174 4.0E-55 T 14-09-2016 AY555_RS08895 e51d33cdd516256547532d48dec5f62b 624 PANTHER PTHR10657:SF13 242 506 4.0E-55 T 14-09-2016 AY555_RS08895 e51d33cdd516256547532d48dec5f62b 624 PANTHER PTHR10657:SF13 1 174 4.0E-55 T 14-09-2016 AY555_RS08895 e51d33cdd516256547532d48dec5f62b 624 SUPERFAMILY SSF54534 260 348 1.1E-10 T 14-09-2016 AY555_RS08895 e51d33cdd516256547532d48dec5f62b 624 Pfam PF13145 PPIC-type PPIASE domain 248 365 4.7E-17 T 14-09-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 AY555_RS08895 e51d33cdd516256547532d48dec5f62b 624 Pfam PF13145 PPIC-type PPIASE domain 487 576 5.2E-6 T 14-09-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 AY555_RS08895 e51d33cdd516256547532d48dec5f62b 624 SUPERFAMILY SSF109998 242 291 2.24E-17 T 14-09-2016 IPR027304 Trigger factor/SurA domain AY555_RS08895 e51d33cdd516256547532d48dec5f62b 624 SUPERFAMILY SSF109998 40 168 2.24E-17 T 14-09-2016 IPR027304 Trigger factor/SurA domain AY555_RS08895 e51d33cdd516256547532d48dec5f62b 624 Pfam PF13624 SurA N-terminal domain 1 164 7.0E-34 T 14-09-2016 AY555_RS08895 e51d33cdd516256547532d48dec5f62b 624 Gene3D G3DSA:3.10.50.40 385 484 3.6E-5 T 14-09-2016 AY555_RS08895 e51d33cdd516256547532d48dec5f62b 624 Gene3D G3DSA:3.10.50.40 260 377 4.3E-15 T 14-09-2016 AY555_RS03760 0d1fb3694e64c53b31a0f68d0630d68b 186 PANTHER PTHR31760 1 157 3.0E-35 T 14-09-2016 AY555_RS03760 0d1fb3694e64c53b31a0f68d0630d68b 186 Gene3D G3DSA:3.40.50.150 2 181 5.2E-45 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS03760 0d1fb3694e64c53b31a0f68d0630d68b 186 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 5 162 1.7E-40 T 14-09-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AY555_RS03760 0d1fb3694e64c53b31a0f68d0630d68b 186 PIRSF PIRSF003078 1 178 2.1E-44 T 14-09-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AY555_RS03760 0d1fb3694e64c53b31a0f68d0630d68b 186 SUPERFAMILY SSF53335 2 162 5.79E-28 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS03760 0d1fb3694e64c53b31a0f68d0630d68b 186 Pfam PF02527 rRNA small subunit methyltransferase G 2 165 9.6E-43 T 14-09-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AY555_RS03760 0d1fb3694e64c53b31a0f68d0630d68b 186 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 1 177 22.354 T 14-09-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AY555_RS03760 0d1fb3694e64c53b31a0f68d0630d68b 186 PANTHER PTHR31760:SF0 1 157 3.0E-35 T 14-09-2016 AY555_RS03040 aea4ed4ae58aad62667ad281f9042983 153 Gene3D G3DSA:3.40.930.10 1 149 5.5E-45 T 14-09-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AY555_RS03040 aea4ed4ae58aad62667ad281f9042983 153 PANTHER PTHR30505 1 153 3.2E-53 T 14-09-2016 AY555_RS03040 aea4ed4ae58aad62667ad281f9042983 153 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 14-09-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AY555_RS03040 aea4ed4ae58aad62667ad281f9042983 153 PANTHER PTHR30505:SF6 1 153 3.2E-53 T 14-09-2016 AY555_RS03040 aea4ed4ae58aad62667ad281f9042983 153 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 3 146 1.2E-46 T 14-09-2016 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AY555_RS03040 aea4ed4ae58aad62667ad281f9042983 153 SUPERFAMILY SSF55804 1 146 4.45E-41 T 14-09-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 AY555_RS03040 aea4ed4ae58aad62667ad281f9042983 153 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 147 7.5E-34 T 14-09-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AY555_RS06615 d122ff4b62ed7a5843dbf18ff95d7e32 184 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 6 183 4.9E-48 T 14-09-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 AY555_RS06615 d122ff4b62ed7a5843dbf18ff95d7e32 184 Gene3D G3DSA:2.70.40.10 3 183 3.5E-63 T 14-09-2016 IPR029054 dUTPase-like AY555_RS06615 d122ff4b62ed7a5843dbf18ff95d7e32 184 SUPERFAMILY SSF51283 3 183 3.01E-50 T 14-09-2016 IPR029054 dUTPase-like AY555_RS06615 d122ff4b62ed7a5843dbf18ff95d7e32 184 PANTHER PTHR11241 1 184 1.3E-68 T 14-09-2016 AY555_RS06615 d122ff4b62ed7a5843dbf18ff95d7e32 184 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 184 28.671 T 14-09-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 AY555_RS06615 d122ff4b62ed7a5843dbf18ff95d7e32 184 Pfam PF00692 dUTPase 77 179 9.1E-5 T 14-09-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 AY555_RS06615 d122ff4b62ed7a5843dbf18ff95d7e32 184 PANTHER PTHR11241:SF1 1 184 1.3E-68 T 14-09-2016 AY555_RS01220 ee470c9d4c79d62289458ca5d33480c7 473 Gene3D G3DSA:1.25.40.10 44 114 1.3E-7 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS01220 ee470c9d4c79d62289458ca5d33480c7 473 SUPERFAMILY SSF110997 391 470 6.67E-5 T 14-09-2016 IPR007730 Sporulation-related domain GO:0042834 AY555_RS01220 ee470c9d4c79d62289458ca5d33480c7 473 Pfam PF05036 Sporulation related domain 393 466 9.4E-6 T 14-09-2016 IPR007730 Sporulation-related domain GO:0042834 AY555_RS01220 ee470c9d4c79d62289458ca5d33480c7 473 SUPERFAMILY SSF48452 43 116 1.97E-7 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS04250 18e70669a98dc48265e905e1cf7fbfef 177 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.34 T 14-09-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 AY555_RS04250 18e70669a98dc48265e905e1cf7fbfef 177 SUPERFAMILY SSF50324 4 174 2.35E-66 T 14-09-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 AY555_RS04250 18e70669a98dc48265e905e1cf7fbfef 177 PANTHER PTHR10286 6 175 2.3E-68 T 14-09-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 AY555_RS04250 18e70669a98dc48265e905e1cf7fbfef 177 Gene3D G3DSA:3.90.80.10 4 175 5.6E-60 T 14-09-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 AY555_RS04250 18e70669a98dc48265e905e1cf7fbfef 177 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 14-09-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 AY555_RS04250 18e70669a98dc48265e905e1cf7fbfef 177 Pfam PF00719 Inorganic pyrophosphatase 18 173 3.7E-53 T 14-09-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 AY555_RS06720 2a0e32728d9c11927dcc924daebbe5e9 342 Pfam PF01594 Domain of unknown function DUF20 1 323 2.0E-55 T 14-09-2016 IPR002549 Transmembrane protein TqsA-like AY555_RS06720 2a0e32728d9c11927dcc924daebbe5e9 342 PANTHER PTHR21716 1 319 1.4E-59 T 14-09-2016 IPR002549 Transmembrane protein TqsA-like AY555_RS02200 3732bd6b5880dc3e4d156405c2422e04 87 Gene3D G3DSA:3.30.70.920 5 78 2.4E-19 T 14-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AY555_RS02200 3732bd6b5880dc3e4d156405c2422e04 87 Pfam PF01037 Lrp/AsnC ligand binding domain 6 76 3.0E-14 T 14-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AY555_RS02200 3732bd6b5880dc3e4d156405c2422e04 87 SUPERFAMILY SSF54909 4 78 1.47E-15 T 14-09-2016 IPR011008 Dimeric alpha-beta barrel AY555_RS07535 75aa6e9fa58591d4c5a1d27f64e8365c 370 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 144 157 - T 14-09-2016 IPR000489 Pterin-binding domain GO:0042558 AY555_RS07535 75aa6e9fa58591d4c5a1d27f64e8365c 370 PANTHER PTHR20941 108 370 1.4E-104 T 14-09-2016 AY555_RS07535 75aa6e9fa58591d4c5a1d27f64e8365c 370 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 110 125 - T 14-09-2016 IPR000489 Pterin-binding domain GO:0042558 AY555_RS07535 75aa6e9fa58591d4c5a1d27f64e8365c 370 SUPERFAMILY SSF51717 104 367 5.23E-92 T 14-09-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 AY555_RS07535 75aa6e9fa58591d4c5a1d27f64e8365c 370 Gene3D G3DSA:3.20.20.20 108 367 2.8E-99 T 14-09-2016 IPR000489 Pterin-binding domain GO:0042558 AY555_RS07535 75aa6e9fa58591d4c5a1d27f64e8365c 370 Pfam PF00809 Pterin binding enzyme 111 350 3.0E-72 T 14-09-2016 IPR000489 Pterin-binding domain GO:0042558 AY555_RS07535 75aa6e9fa58591d4c5a1d27f64e8365c 370 PANTHER PTHR20941:SF1 108 370 1.4E-104 T 14-09-2016 AY555_RS07535 75aa6e9fa58591d4c5a1d27f64e8365c 370 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 110 364 1.3E-86 T 14-09-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 AY555_RS06290 163a2eee0904e4e50334c4ed4c4e0159 334 PANTHER PTHR30005 7 316 1.1E-69 T 14-09-2016 AY555_RS06290 163a2eee0904e4e50334c4ed4c4e0159 334 Pfam PF02541 Ppx/GppA phosphatase family 22 316 2.4E-42 T 14-09-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 AY555_RS06290 163a2eee0904e4e50334c4ed4c4e0159 334 Gene3D G3DSA:3.30.420.40 5 126 6.2E-40 T 14-09-2016 AY555_RS06290 163a2eee0904e4e50334c4ed4c4e0159 334 SUPERFAMILY SSF53067 133 317 1.74E-33 T 14-09-2016 AY555_RS06290 163a2eee0904e4e50334c4ed4c4e0159 334 Gene3D G3DSA:3.30.420.150 131 317 5.6E-45 T 14-09-2016 AY555_RS06290 163a2eee0904e4e50334c4ed4c4e0159 334 SUPERFAMILY SSF53067 8 128 7.99E-33 T 14-09-2016 AY555_RS00285 b07919585694968c011b0ff714ee538e 331 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 26 324 4.9E-77 T 14-09-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 AY555_RS00285 b07919585694968c011b0ff714ee538e 331 SUPERFAMILY SSF51556 10 327 6.6E-59 T 14-09-2016 IPR032466 Metal-dependent hydrolase AY555_RS00285 b07919585694968c011b0ff714ee538e 331 PANTHER PTHR10443 64 252 5.4E-39 T 14-09-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 AY555_RS00285 b07919585694968c011b0ff714ee538e 331 Gene3D G3DSA:3.20.20.140 37 328 2.2E-74 T 14-09-2016 AY555_RS03530 75ec975f8bfa4bc03099f189fba05425 369 Pfam PF03739 Predicted permease YjgP/YjgQ family 11 363 2.3E-55 T 14-09-2016 IPR005495 Permease LptG/LptF-related GO:0016021 AY555_RS03530 75ec975f8bfa4bc03099f189fba05425 369 PANTHER PTHR33529:SF1 3 368 1.0E-44 T 14-09-2016 AY555_RS03530 75ec975f8bfa4bc03099f189fba05425 369 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 7 366 5.3E-74 T 14-09-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 AY555_RS03530 75ec975f8bfa4bc03099f189fba05425 369 PANTHER PTHR33529 3 368 1.0E-44 T 14-09-2016 AY555_RS02615 dade8f7e361562c75b62468314e2ccc2 190 Gene3D G3DSA:3.40.50.150 10 126 1.7E-18 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS02615 dade8f7e361562c75b62468314e2ccc2 190 SUPERFAMILY SSF53335 2 129 2.52E-20 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS02615 dade8f7e361562c75b62468314e2ccc2 190 PANTHER PTHR10108 1 73 5.3E-14 T 14-09-2016 AY555_RS02615 dade8f7e361562c75b62468314e2ccc2 190 Pfam PF08241 Methyltransferase domain 8 60 4.1E-13 T 14-09-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AY555_RS06320 010dfdf9a5c7f0cb96974aab3121ebe0 350 Pfam PF08666 SAF domain 291 347 1.7E-12 T 14-09-2016 IPR013974 SAF domain AY555_RS06320 010dfdf9a5c7f0cb96974aab3121ebe0 350 Gene3D G3DSA:3.90.1210.10 291 348 1.1E-21 T 14-09-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal AY555_RS06320 010dfdf9a5c7f0cb96974aab3121ebe0 350 TIGRFAM TIGR03586 PseI: pseudaminic acid synthase 16 342 1.8E-148 T 14-09-2016 IPR020030 Pseudaminic acid biosynthesis, PseI KEGG: 00520+2.5.1.97|MetaCyc: PWY-6143 AY555_RS06320 010dfdf9a5c7f0cb96974aab3121ebe0 350 SMART SM00858 290 348 5.8E-13 T 14-09-2016 IPR013974 SAF domain AY555_RS06320 010dfdf9a5c7f0cb96974aab3121ebe0 350 SUPERFAMILY SSF51269 285 348 8.77E-19 T 14-09-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal AY555_RS06320 010dfdf9a5c7f0cb96974aab3121ebe0 350 Pfam PF03102 NeuB family 38 275 2.6E-90 T 14-09-2016 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 AY555_RS06320 010dfdf9a5c7f0cb96974aab3121ebe0 350 PANTHER PTHR23416 1 300 1.9E-95 T 14-09-2016 AY555_RS06320 010dfdf9a5c7f0cb96974aab3121ebe0 350 SUPERFAMILY SSF51569 5 302 2.44E-93 T 14-09-2016 AY555_RS06320 010dfdf9a5c7f0cb96974aab3121ebe0 350 PANTHER PTHR23416:SF62 1 300 1.9E-95 T 14-09-2016 AY555_RS06320 010dfdf9a5c7f0cb96974aab3121ebe0 350 Gene3D G3DSA:3.20.20.70 5 275 1.5E-107 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS02805 5940ccbb9727f5589a43caf4aa13a0c2 407 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 18 402 2.7E-64 T 14-09-2016 IPR006444 Phage major capsid protein, HK97 AY555_RS02805 5940ccbb9727f5589a43caf4aa13a0c2 407 SUPERFAMILY SSF56563 128 403 9.81E-83 T 14-09-2016 AY555_RS02805 5940ccbb9727f5589a43caf4aa13a0c2 407 Pfam PF05065 Phage capsid family 135 403 6.6E-61 T 14-09-2016 IPR024455 Phage capsid AY555_RS06125 27a80a5e04c884fb233b1a281465260f 379 Pfam PF01098 Cell cycle protein 24 368 1.3E-72 T 14-09-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 AY555_RS06125 27a80a5e04c884fb233b1a281465260f 379 PANTHER PTHR30474:SF2 1 368 2.9E-96 T 14-09-2016 AY555_RS06125 27a80a5e04c884fb233b1a281465260f 379 PANTHER PTHR30474 1 368 2.9E-96 T 14-09-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 AY555_RS06420 b60202d9751bd02d062899f4c71f4ea6 426 Pfam PF10926 Protein of unknown function (DUF2800) 9 405 4.8E-64 T 14-09-2016 IPR021229 Protein of unknown function DUF2800 AY555_RS06420 b60202d9751bd02d062899f4c71f4ea6 426 Gene3D G3DSA:3.90.180.10 64 161 1.3E-4 T 14-09-2016 IPR011032 GroES-like AY555_RS07135 6f8ed6ba0f0929f30f6bae542c3bbcdb 320 PIRSF PIRSF004911 1 319 4.6E-110 T 14-09-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase AY555_RS07135 6f8ed6ba0f0929f30f6bae542c3bbcdb 320 Gene3D G3DSA:3.20.20.70 73 286 2.2E-20 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS07135 6f8ed6ba0f0929f30f6bae542c3bbcdb 320 Pfam PF13353 4Fe-4S single cluster domain 87 141 2.2E-6 T 14-09-2016 AY555_RS07135 6f8ed6ba0f0929f30f6bae542c3bbcdb 320 PANTHER PTHR30538:SF1 8 311 1.9E-99 T 14-09-2016 AY555_RS07135 6f8ed6ba0f0929f30f6bae542c3bbcdb 320 Pfam PF04055 Radical SAM superfamily 86 233 8.9E-8 T 14-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AY555_RS07135 6f8ed6ba0f0929f30f6bae542c3bbcdb 320 TIGRFAM TIGR03822 AblA_like_2: lysine-2,3-aminomutase-related protein 8 310 2.7E-127 T 14-09-2016 IPR022447 Lysine-2,3-aminomutase-related AY555_RS07135 6f8ed6ba0f0929f30f6bae542c3bbcdb 320 TIGRFAM TIGR00238 TIGR00238: KamA family protein 23 300 1.4E-73 T 14-09-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase AY555_RS07135 6f8ed6ba0f0929f30f6bae542c3bbcdb 320 PANTHER PTHR30538 8 311 1.9E-99 T 14-09-2016 AY555_RS07135 6f8ed6ba0f0929f30f6bae542c3bbcdb 320 SUPERFAMILY SSF102114 71 311 1.31E-30 T 14-09-2016 AY555_RS02370 88458ccb8b0082f2e473a0ed5b8579c5 459 PANTHER PTHR11963 102 454 2.3E-132 T 14-09-2016 AY555_RS02370 88458ccb8b0082f2e473a0ed5b8579c5 459 Gene3D G3DSA:3.40.630.10 142 454 3.2E-111 T 14-09-2016 AY555_RS02370 88458ccb8b0082f2e473a0ed5b8579c5 459 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 145 432 1.0E-99 T 14-09-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AY555_RS02370 88458ccb8b0082f2e473a0ed5b8579c5 459 PANTHER PTHR11963:SF13 102 454 2.3E-132 T 14-09-2016 AY555_RS02370 88458ccb8b0082f2e473a0ed5b8579c5 459 SUPERFAMILY SSF53187 141 454 2.54E-102 T 14-09-2016 AY555_RS02370 88458ccb8b0082f2e473a0ed5b8579c5 459 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 304 311 - T 14-09-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AY555_RS02370 88458ccb8b0082f2e473a0ed5b8579c5 459 PRINTS PR00481 Cytosol aminopeptidase signature 278 299 2.7E-42 T 14-09-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AY555_RS02370 88458ccb8b0082f2e473a0ed5b8579c5 459 PRINTS PR00481 Cytosol aminopeptidase signature 219 236 2.7E-42 T 14-09-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AY555_RS02370 88458ccb8b0082f2e473a0ed5b8579c5 459 PRINTS PR00481 Cytosol aminopeptidase signature 241 262 2.7E-42 T 14-09-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AY555_RS02370 88458ccb8b0082f2e473a0ed5b8579c5 459 PRINTS PR00481 Cytosol aminopeptidase signature 328 343 2.7E-42 T 14-09-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AY555_RS02370 88458ccb8b0082f2e473a0ed5b8579c5 459 PRINTS PR00481 Cytosol aminopeptidase signature 300 320 2.7E-42 T 14-09-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AY555_RS07785 740b88c8232fa6aef854f8c475cdfced 254 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 205 231 - T 14-09-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 AY555_RS07785 740b88c8232fa6aef854f8c475cdfced 254 Pfam PF01148 Cytidylyltransferase family 4 244 3.6E-54 T 14-09-2016 AY555_RS07785 740b88c8232fa6aef854f8c475cdfced 254 PANTHER PTHR13773 5 240 3.5E-54 T 14-09-2016 AY555_RS01950 a0e88d71895b5eaf42b38b8c8bad3374 405 PANTHER PTHR11986:SF79 2 405 1.1E-155 T 14-09-2016 AY555_RS01950 a0e88d71895b5eaf42b38b8c8bad3374 405 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 13 402 40.151 T 14-09-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AY555_RS01950 a0e88d71895b5eaf42b38b8c8bad3374 405 PANTHER PTHR11986 2 405 1.1E-155 T 14-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AY555_RS01950 a0e88d71895b5eaf42b38b8c8bad3374 405 SUPERFAMILY SSF53383 11 403 4.21E-117 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AY555_RS01950 a0e88d71895b5eaf42b38b8c8bad3374 405 Pfam PF00202 Aminotransferase class-III 24 401 9.3E-114 T 14-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AY555_RS01950 a0e88d71895b5eaf42b38b8c8bad3374 405 Gene3D G3DSA:3.40.640.10 59 295 8.6E-82 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AY555_RS01950 a0e88d71895b5eaf42b38b8c8bad3374 405 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 400 1.6E-130 T 14-09-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AY555_RS01950 a0e88d71895b5eaf42b38b8c8bad3374 405 Gene3D G3DSA:3.90.1150.10 296 403 1.1E-35 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AY555_RS09090 359bbce846994359478fa5f2744cdb44 394 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 9 381 8.7E-142 T 14-09-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AY555_RS09090 359bbce846994359478fa5f2744cdb44 394 Pfam PF06965 Na+/H+ antiporter 1 8 381 6.0E-142 T 14-09-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AY555_RS09090 359bbce846994359478fa5f2744cdb44 394 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 6 389 22.774 T 14-09-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AY555_RS09090 359bbce846994359478fa5f2744cdb44 394 PANTHER PTHR30341:SF0 3 392 9.4E-162 T 14-09-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AY555_RS09090 359bbce846994359478fa5f2744cdb44 394 PANTHER PTHR30341 3 392 9.4E-162 T 14-09-2016 AY555_RS09090 359bbce846994359478fa5f2744cdb44 394 Gene3D G3DSA:1.20.1530.10 5 385 5.3E-146 T 14-09-2016 IPR023171 Na/H antiporter domain AY555_RS09830 d3e7712e488939de81359c85ebc7ac32 375 Pfam PF13692 Glycosyl transferases group 1 199 326 2.0E-27 T 14-09-2016 AY555_RS09830 d3e7712e488939de81359c85ebc7ac32 375 Pfam PF13579 Glycosyl transferase 4-like domain 24 184 2.7E-9 T 14-09-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AY555_RS09830 d3e7712e488939de81359c85ebc7ac32 375 SUPERFAMILY SSF53756 8 359 3.45E-55 T 14-09-2016 AY555_RS09830 d3e7712e488939de81359c85ebc7ac32 375 PANTHER PTHR12526 1 363 4.0E-39 T 14-09-2016 AY555_RS09830 d3e7712e488939de81359c85ebc7ac32 375 Gene3D G3DSA:3.40.50.2000 197 328 1.8E-28 T 14-09-2016 AY555_RS08500 cef74e9844bb6d6c06392b03f5699a13 281 PANTHER PTHR21181 7 264 1.1E-29 T 14-09-2016 AY555_RS08500 cef74e9844bb6d6c06392b03f5699a13 281 SUPERFAMILY SSF48576 11 280 2.3E-39 T 14-09-2016 IPR008949 Isoprenoid synthase domain AY555_RS08500 cef74e9844bb6d6c06392b03f5699a13 281 Pfam PF00494 Squalene/phytoene synthase 15 259 2.6E-36 T 14-09-2016 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 AY555_RS08500 cef74e9844bb6d6c06392b03f5699a13 281 Gene3D G3DSA:1.10.600.10 23 277 2.9E-9 T 14-09-2016 IPR008949 Isoprenoid synthase domain AY555_RS08500 cef74e9844bb6d6c06392b03f5699a13 281 PANTHER PTHR21181:SF13 7 264 1.1E-29 T 14-09-2016 AY555_RS00745 ecd81bdf1fbd2ca3d0194c5f58f719f4 132 Pfam PF00581 Rhodanese-like domain 24 121 8.5E-12 T 14-09-2016 IPR001763 Rhodanese-like domain AY555_RS00745 ecd81bdf1fbd2ca3d0194c5f58f719f4 132 SUPERFAMILY SSF52821 3 129 4.58E-26 T 14-09-2016 IPR001763 Rhodanese-like domain AY555_RS00745 ecd81bdf1fbd2ca3d0194c5f58f719f4 132 Gene3D G3DSA:3.40.250.10 3 127 3.0E-25 T 14-09-2016 IPR001763 Rhodanese-like domain AY555_RS00745 ecd81bdf1fbd2ca3d0194c5f58f719f4 132 SMART SM00450 21 125 4.9E-15 T 14-09-2016 IPR001763 Rhodanese-like domain AY555_RS03330 b78fe50ffc44f74b891b57222fd65ce6 902 SUPERFAMILY SSF53448 24 250 1.58E-8 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AY555_RS07365 9f9ebb84e39c262c505409c91bd47155 330 SUPERFAMILY SSF52540 7 328 8.86E-84 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS07365 9f9ebb84e39c262c505409c91bd47155 330 PANTHER PTHR23408 7 329 4.7E-139 T 14-09-2016 AY555_RS07365 9f9ebb84e39c262c505409c91bd47155 330 Gene3D G3DSA:1.20.5.170 6 57 1.3E-18 T 14-09-2016 AY555_RS07365 9f9ebb84e39c262c505409c91bd47155 330 Pfam PF03308 ArgK protein 25 295 1.7E-100 T 14-09-2016 AY555_RS07365 9f9ebb84e39c262c505409c91bd47155 330 PANTHER PTHR23408:SF17 7 329 4.7E-139 T 14-09-2016 AY555_RS07365 9f9ebb84e39c262c505409c91bd47155 330 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 19 325 1.6E-98 T 14-09-2016 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 AY555_RS07365 9f9ebb84e39c262c505409c91bd47155 330 Gene3D G3DSA:3.40.50.300 58 260 1.2E-47 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04675 9f7c39f7b43bb8e83030329b160d8600 176 Pfam PF00430 ATP synthase B/B' CF(0) 23 151 4.3E-22 T 14-09-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AY555_RS04675 9f7c39f7b43bb8e83030329b160d8600 176 Hamap MF_01398 ATP synthase subunit b [atpF]. 2 171 10.307 T 14-09-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AY555_RS02315 bb7d02a0359535b5e3450dbfc8edc022 532 SUPERFAMILY SSF51445 36 303 1.64E-45 T 14-09-2016 IPR017853 Glycoside hydrolase superfamily AY555_RS02315 bb7d02a0359535b5e3450dbfc8edc022 532 PANTHER PTHR16631 27 315 7.1E-74 T 14-09-2016 AY555_RS02315 bb7d02a0359535b5e3450dbfc8edc022 532 Gene3D G3DSA:3.20.20.80 60 302 2.8E-25 T 14-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AY555_RS02315 bb7d02a0359535b5e3450dbfc8edc022 532 PANTHER PTHR16631:SF5 27 315 7.1E-74 T 14-09-2016 AY555_RS00140 5afee1b628f3be086b9124a5268dd3cf 197 Pfam PF03748 Flagellar basal body-associated protein FliL 100 197 5.5E-18 T 14-09-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 AY555_RS00140 5afee1b628f3be086b9124a5268dd3cf 197 PANTHER PTHR35091 86 197 3.7E-27 T 14-09-2016 AY555_RS00140 5afee1b628f3be086b9124a5268dd3cf 197 PANTHER PTHR35091 14 67 3.7E-27 T 14-09-2016 AY555_RS06940 0f364a75ae549d37db1858d8519fa987 258 Pfam PF03476 MOSC N-terminal beta barrel domain 3 97 6.9E-9 T 14-09-2016 IPR005303 MOSC, N-terminal beta barrel AY555_RS06940 0f364a75ae549d37db1858d8519fa987 258 Pfam PF03473 MOSC domain 140 250 1.0E-9 T 14-09-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 AY555_RS06940 0f364a75ae549d37db1858d8519fa987 258 SUPERFAMILY SSF50800 2 47 2.2E-17 T 14-09-2016 IPR011037 Pyruvate kinase-like, insert domain AY555_RS06940 0f364a75ae549d37db1858d8519fa987 258 SUPERFAMILY SSF50800 140 250 2.2E-17 T 14-09-2016 IPR011037 Pyruvate kinase-like, insert domain AY555_RS06940 0f364a75ae549d37db1858d8519fa987 258 Gene3D G3DSA:2.40.33.20 141 252 2.4E-4 T 14-09-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like AY555_RS06940 0f364a75ae549d37db1858d8519fa987 258 SUPERFAMILY SSF141673 5 116 9.94E-6 T 14-09-2016 AY555_RS09030 e0bceba8aa59e4313cc9c54f7f558a77 604 PANTHER PTHR11804 200 604 3.7E-58 T 14-09-2016 AY555_RS09030 e0bceba8aa59e4313cc9c54f7f558a77 604 Gene3D G3DSA:3.40.390.10 353 431 5.9E-6 T 14-09-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AY555_RS09030 e0bceba8aa59e4313cc9c54f7f558a77 604 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 22 602 8.4E-187 T 14-09-2016 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 AY555_RS09030 e0bceba8aa59e4313cc9c54f7f558a77 604 Pfam PF01432 Peptidase family M3 347 589 6.2E-31 T 14-09-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 AY555_RS09030 e0bceba8aa59e4313cc9c54f7f558a77 604 Pfam PF08439 Oligopeptidase F 125 194 2.1E-17 T 14-09-2016 IPR013647 Oligopeptidase F, N-terminal domain AY555_RS09030 e0bceba8aa59e4313cc9c54f7f558a77 604 SUPERFAMILY SSF55486 21 587 1.19E-111 T 14-09-2016 AY555_RS09030 e0bceba8aa59e4313cc9c54f7f558a77 604 PANTHER PTHR11804:SF8 200 604 3.7E-58 T 14-09-2016 AY555_RS03925 a33082778754153919b365038786bc9b 107 ProSitePatterns PS00194 Thioredoxin family active site. 21 39 - T 14-09-2016 IPR017937 Thioredoxin, conserved site GO:0045454 AY555_RS03925 a33082778754153919b365038786bc9b 107 PIRSF PIRSF000077 1 104 1.1E-39 T 14-09-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AY555_RS03925 a33082778754153919b365038786bc9b 107 PANTHER PTHR10438 1 102 4.9E-34 T 14-09-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AY555_RS03925 a33082778754153919b365038786bc9b 107 PRINTS PR00421 Thioredoxin family signature 28 37 3.1E-9 T 14-09-2016 AY555_RS03925 a33082778754153919b365038786bc9b 107 PRINTS PR00421 Thioredoxin family signature 68 79 3.1E-9 T 14-09-2016 AY555_RS03925 a33082778754153919b365038786bc9b 107 PRINTS PR00421 Thioredoxin family signature 20 28 3.1E-9 T 14-09-2016 AY555_RS03925 a33082778754153919b365038786bc9b 107 TIGRFAM TIGR01068 thioredoxin: thioredoxin 5 103 1.3E-34 T 14-09-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AY555_RS03925 a33082778754153919b365038786bc9b 107 Gene3D G3DSA:3.40.30.10 1 103 7.8E-35 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS03925 a33082778754153919b365038786bc9b 107 Pfam PF00085 Thioredoxin 2 102 1.0E-30 T 14-09-2016 IPR013766 Thioredoxin domain GO:0045454 AY555_RS03925 a33082778754153919b365038786bc9b 107 SUPERFAMILY SSF52833 2 102 2.71E-34 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS03600 b0d531ee48fc98ef923e1f27bc594062 231 Gene3D G3DSA:3.40.50.150 38 149 2.7E-10 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS03600 b0d531ee48fc98ef923e1f27bc594062 231 Pfam PF13649 Methyltransferase domain 64 132 3.6E-7 T 14-09-2016 AY555_RS03600 b0d531ee48fc98ef923e1f27bc594062 231 SUPERFAMILY SSF53335 42 136 6.93E-12 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS09085 8b3da75db3808e02adc2dc7f6790a448 288 SUPERFAMILY SSF52317 8 284 2.16E-49 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AY555_RS09085 8b3da75db3808e02adc2dc7f6790a448 288 PANTHER PTHR11019 1 115 5.2E-82 T 14-09-2016 AY555_RS09085 8b3da75db3808e02adc2dc7f6790a448 288 PANTHER PTHR11019:SF109 133 274 5.2E-82 T 14-09-2016 AY555_RS09085 8b3da75db3808e02adc2dc7f6790a448 288 PANTHER PTHR11019:SF109 1 115 5.2E-82 T 14-09-2016 AY555_RS09085 8b3da75db3808e02adc2dc7f6790a448 288 PIRSF PIRSF037798 1 287 5.2E-135 T 14-09-2016 IPR017283 Molecular chaperone Hsp31 and glyoxalase 3 GO:0016829|GO:0042026 KEGG: 00620+4.2.1.130|MetaCyc: PWY-901 AY555_RS09085 8b3da75db3808e02adc2dc7f6790a448 288 PANTHER PTHR11019 133 274 5.2E-82 T 14-09-2016 AY555_RS09085 8b3da75db3808e02adc2dc7f6790a448 288 Gene3D G3DSA:3.40.50.880 6 281 1.1E-68 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AY555_RS09120 6d270e702a469dc214223de2285ac972 490 PANTHER PTHR11895:SF7 2 486 1.0E-210 T 14-09-2016 AY555_RS09120 6d270e702a469dc214223de2285ac972 490 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 13 478 1.6E-171 T 14-09-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AY555_RS09120 6d270e702a469dc214223de2285ac972 490 Gene3D G3DSA:3.90.1300.10 2 483 5.7E-176 T 14-09-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AY555_RS09120 6d270e702a469dc214223de2285ac972 490 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 11 480 91.519 T 14-09-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AY555_RS09120 6d270e702a469dc214223de2285ac972 490 PANTHER PTHR11895 2 486 1.0E-210 T 14-09-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AY555_RS09120 6d270e702a469dc214223de2285ac972 490 SUPERFAMILY SSF75304 1 483 1.05E-158 T 14-09-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AY555_RS09120 6d270e702a469dc214223de2285ac972 490 Pfam PF01425 Amidase 24 469 6.5E-153 T 14-09-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AY555_RS09120 6d270e702a469dc214223de2285ac972 490 ProSitePatterns PS00571 Amidases signature. 155 186 - T 14-09-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AY555_RS01850 c3fce3671e44e475fe999eeb7e13eaec 222 Pfam PF08241 Methyltransferase domain 56 155 4.0E-8 T 14-09-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AY555_RS01850 c3fce3671e44e475fe999eeb7e13eaec 222 PIRSF PIRSF011491 2 221 5.7E-81 T 14-09-2016 IPR016584 S-adenosyl-L-methionine dependent methyltransferase, YbcY, predicted AY555_RS01850 c3fce3671e44e475fe999eeb7e13eaec 222 SUPERFAMILY SSF53335 43 209 3.31E-16 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS01850 c3fce3671e44e475fe999eeb7e13eaec 222 Gene3D G3DSA:3.40.50.150 49 208 1.5E-12 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS08615 33efb046d7a715c6f0a0fe1ecc2ac183 261 Pfam PF01975 Survival protein SurE 13 194 4.9E-55 T 14-09-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 AY555_RS08615 33efb046d7a715c6f0a0fe1ecc2ac183 261 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 12 247 1.0E-64 T 14-09-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 AY555_RS08615 33efb046d7a715c6f0a0fe1ecc2ac183 261 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 11 261 36.786 T 14-09-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 AY555_RS08615 33efb046d7a715c6f0a0fe1ecc2ac183 261 Gene3D G3DSA:3.40.1210.10 12 257 9.5E-83 T 14-09-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 AY555_RS08615 33efb046d7a715c6f0a0fe1ecc2ac183 261 PANTHER PTHR30457 12 255 2.1E-78 T 14-09-2016 AY555_RS08615 33efb046d7a715c6f0a0fe1ecc2ac183 261 SUPERFAMILY SSF64167 12 258 1.06E-81 T 14-09-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 AY555_RS00355 fbf14de7eba080bc9b11d42c0a066967 476 Pfam PF01523 Putative modulator of DNA gyrase 37 326 5.1E-57 T 14-09-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AY555_RS00355 fbf14de7eba080bc9b11d42c0a066967 476 PANTHER PTHR30624 13 476 6.0E-203 T 14-09-2016 AY555_RS00355 fbf14de7eba080bc9b11d42c0a066967 476 PIRSF PIRSF004919 16 475 3.9E-127 T 14-09-2016 IPR025502 TldD KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AY555_RS00355 fbf14de7eba080bc9b11d42c0a066967 476 SUPERFAMILY SSF111283 28 474 2.09E-121 T 14-09-2016 AY555_RS00355 fbf14de7eba080bc9b11d42c0a066967 476 PANTHER PTHR30624:SF4 13 476 6.0E-203 T 14-09-2016 AY555_RS03280 3a6d2a24fc25b9f836e74f12703cdca0 239 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 41 222 1.5E-82 T 14-09-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AY555_RS03280 3a6d2a24fc25b9f836e74f12703cdca0 239 PANTHER PTHR30071 1 220 1.3E-79 T 14-09-2016 AY555_RS03280 3a6d2a24fc25b9f836e74f12703cdca0 239 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 117 137 1.5E-55 T 14-09-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AY555_RS03280 3a6d2a24fc25b9f836e74f12703cdca0 239 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 200 224 1.5E-55 T 14-09-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AY555_RS03280 3a6d2a24fc25b9f836e74f12703cdca0 239 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 152 178 1.5E-55 T 14-09-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AY555_RS03280 3a6d2a24fc25b9f836e74f12703cdca0 239 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 58 78 1.5E-55 T 14-09-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AY555_RS03280 3a6d2a24fc25b9f836e74f12703cdca0 239 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 96 116 1.5E-55 T 14-09-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AY555_RS03280 3a6d2a24fc25b9f836e74f12703cdca0 239 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 41 58 1.5E-55 T 14-09-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AY555_RS03280 3a6d2a24fc25b9f836e74f12703cdca0 239 Pfam PF01578 Cytochrome C assembly protein 22 180 9.4E-35 T 14-09-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AY555_RS09635 4ac8950b6d8f5bd6fc87f70d1a71e953 213 SUPERFAMILY SSF52540 6 204 5.49E-41 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS09635 4ac8950b6d8f5bd6fc87f70d1a71e953 213 PANTHER PTHR21343:SF0 4 193 4.0E-51 T 14-09-2016 AY555_RS09635 4ac8950b6d8f5bd6fc87f70d1a71e953 213 Pfam PF13500 AAA domain 6 196 1.4E-49 T 14-09-2016 AY555_RS09635 4ac8950b6d8f5bd6fc87f70d1a71e953 213 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 9 164 5.0E-40 T 14-09-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 AY555_RS09635 4ac8950b6d8f5bd6fc87f70d1a71e953 213 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 5 192 26.674 T 14-09-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 AY555_RS09635 4ac8950b6d8f5bd6fc87f70d1a71e953 213 PANTHER PTHR21343 4 193 4.0E-51 T 14-09-2016 AY555_RS09635 4ac8950b6d8f5bd6fc87f70d1a71e953 213 PIRSF PIRSF006755 4 213 3.0E-51 T 14-09-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 AY555_RS09635 4ac8950b6d8f5bd6fc87f70d1a71e953 213 Gene3D G3DSA:3.40.50.300 6 199 1.0E-58 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08175 e3c308928247dec983fd55b1fe2ef32e 374 Pfam PF00925 GTP cyclohydrolase II 214 364 8.6E-29 T 14-09-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 AY555_RS08175 e3c308928247dec983fd55b1fe2ef32e 374 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 13 203 3.0E-83 T 14-09-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AY555_RS08175 e3c308928247dec983fd55b1fe2ef32e 374 PANTHER PTHR21327:SF6 13 368 8.0E-136 T 14-09-2016 AY555_RS08175 e3c308928247dec983fd55b1fe2ef32e 374 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 7 209 37.762 T 14-09-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AY555_RS08175 e3c308928247dec983fd55b1fe2ef32e 374 PIRSF PIRSF001259 8 373 5.3E-115 T 14-09-2016 AY555_RS08175 e3c308928247dec983fd55b1fe2ef32e 374 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 12 204 1.4E-71 T 14-09-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AY555_RS08175 e3c308928247dec983fd55b1fe2ef32e 374 PANTHER PTHR21327 13 368 8.0E-136 T 14-09-2016 AY555_RS08175 e3c308928247dec983fd55b1fe2ef32e 374 SUPERFAMILY SSF55821 5 209 9.61E-86 T 14-09-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain AY555_RS08175 e3c308928247dec983fd55b1fe2ef32e 374 Gene3D G3DSA:3.90.870.10 8 217 5.9E-97 T 14-09-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain AY555_RS08175 e3c308928247dec983fd55b1fe2ef32e 374 SUPERFAMILY SSF142695 210 368 4.45E-38 T 14-09-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 AY555_RS00370 1a887748929c4274853b3d879076144a 227 Pfam PF13189 Cytidylate kinase-like family 30 200 2.6E-32 T 14-09-2016 IPR026865 Cytidylate kinase-like family MetaCyc: PWY-7205 AY555_RS00370 1a887748929c4274853b3d879076144a 227 Gene3D G3DSA:3.40.50.300 29 217 4.3E-34 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS07185 2289a1a934d302b76255f92043fa53e3 681 Pfam PF09397 Ftsk gamma domain 606 665 1.9E-25 T 14-09-2016 IPR018541 FtsK gamma domain AY555_RS07185 2289a1a934d302b76255f92043fa53e3 681 PANTHER PTHR22683:SF41 162 671 3.8E-228 T 14-09-2016 AY555_RS07185 2289a1a934d302b76255f92043fa53e3 681 SUPERFAMILY SSF46785 603 667 4.94E-21 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS07185 2289a1a934d302b76255f92043fa53e3 681 PANTHER PTHR22683 162 671 3.8E-228 T 14-09-2016 AY555_RS07185 2289a1a934d302b76255f92043fa53e3 681 SUPERFAMILY SSF52540 252 563 3.19E-50 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS07185 2289a1a934d302b76255f92043fa53e3 681 Pfam PF01580 FtsK/SpoIIIE family 273 492 6.3E-62 T 14-09-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AY555_RS07185 2289a1a934d302b76255f92043fa53e3 681 Gene3D G3DSA:3.40.50.300 250 557 1.2E-94 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS07185 2289a1a934d302b76255f92043fa53e3 681 SMART SM00843 603 668 3.6E-35 T 14-09-2016 IPR018541 FtsK gamma domain AY555_RS04955 0c7314f7843b83db0bf0d489d000e636 215 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 158 189 0.0011 T 14-09-2016 IPR001451 Hexapeptide repeat AY555_RS04955 0c7314f7843b83db0bf0d489d000e636 215 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 121 155 4.1E-5 T 14-09-2016 IPR001451 Hexapeptide repeat AY555_RS04955 0c7314f7843b83db0bf0d489d000e636 215 Gene3D G3DSA:3.40.50.20 1 86 1.2E-7 T 14-09-2016 IPR016185 Pre-ATP-grasp domain AY555_RS04955 0c7314f7843b83db0bf0d489d000e636 215 SUPERFAMILY SSF51161 3 205 2.5E-32 T 14-09-2016 IPR011004 Trimeric LpxA-like AY555_RS04955 0c7314f7843b83db0bf0d489d000e636 215 Gene3D G3DSA:2.160.10.10 92 206 6.2E-27 T 14-09-2016 AY555_RS04955 0c7314f7843b83db0bf0d489d000e636 215 PANTHER PTHR23416 93 205 1.5E-12 T 14-09-2016 AY555_RS09045 1bc6b729077a79957da5b75babdec487 80 Pfam PF10073 Uncharacterized protein conserved in bacteria (DUF2312) 8 79 2.8E-31 T 14-09-2016 IPR018753 Azospirillum phage Cd, Gp10 AY555_RS00445 dedf3ae9ad317b5a5643563dab78f6fb 81 Pfam PF09834 Predicted membrane protein (DUF2061) 4 55 1.4E-20 T 14-09-2016 IPR018638 Domain of unknown function DUF2061, membrane AY555_RS01325 e34a483ef7616bd1a4e3f0c40a063c01 98 Pfam PF11625 Protein of unknown function (DUF3253) 18 96 1.2E-15 T 14-09-2016 IPR021660 Protein of unknown function DUF3253 AY555_RS01325 e34a483ef7616bd1a4e3f0c40a063c01 98 Gene3D G3DSA:1.10.10.10 14 97 1.1E-15 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS01325 e34a483ef7616bd1a4e3f0c40a063c01 98 SUPERFAMILY SSF46785 19 96 4.35E-12 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS01275 6c85646bf4c910842658618f74aebc32 151 Gene3D G3DSA:1.10.1510.10 2 94 1.0E-27 T 14-09-2016 AY555_RS01275 6c85646bf4c910842658618f74aebc32 151 Gene3D G3DSA:1.10.10.410 95 151 3.1E-18 T 14-09-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal AY555_RS01275 6c85646bf4c910842658618f74aebc32 151 SUPERFAMILY SSF89095 2 150 1.94E-36 T 14-09-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 AY555_RS01275 6c85646bf4c910842658618f74aebc32 151 PANTHER PTHR28055:SF1 1 151 4.3E-38 T 14-09-2016 AY555_RS01275 6c85646bf4c910842658618f74aebc32 151 PANTHER PTHR28055 1 151 4.3E-38 T 14-09-2016 AY555_RS01275 6c85646bf4c910842658618f74aebc32 151 Pfam PF09424 Yqey-like protein 4 150 1.9E-46 T 14-09-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial AY555_RS08870 c6ca441e2d398d96bef882d179f41ac0 286 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 23 279 6.8E-118 T 14-09-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 AY555_RS08870 c6ca441e2d398d96bef882d179f41ac0 286 SUPERFAMILY SSF51569 9 282 1.47E-102 T 14-09-2016 AY555_RS08870 c6ca441e2d398d96bef882d179f41ac0 286 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 18 281 52.106 T 14-09-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 AY555_RS08870 c6ca441e2d398d96bef882d179f41ac0 286 PANTHER PTHR21057 9 286 4.6E-153 T 14-09-2016 AY555_RS08870 c6ca441e2d398d96bef882d179f41ac0 286 Pfam PF00793 DAHP synthetase I family 16 269 1.4E-64 T 14-09-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 AY555_RS08870 c6ca441e2d398d96bef882d179f41ac0 286 PANTHER PTHR21057:SF2 9 286 4.6E-153 T 14-09-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 AY555_RS08870 c6ca441e2d398d96bef882d179f41ac0 286 Gene3D G3DSA:3.20.20.70 23 280 3.9E-107 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS02420 b6b9a061bac00846413543c72658ad08 339 PANTHER PTHR22926:SF3 16 336 6.6E-47 T 14-09-2016 AY555_RS02420 b6b9a061bac00846413543c72658ad08 339 Pfam PF00953 Glycosyl transferase family 4 82 235 3.9E-26 T 14-09-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AY555_RS02420 b6b9a061bac00846413543c72658ad08 339 PANTHER PTHR22926 16 336 6.6E-47 T 14-09-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AY555_RS07975 a1f5e59dc68f06f770850eaed54bcd1c 151 Gene3D G3DSA:3.40.630.30 16 149 3.4E-21 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AY555_RS07975 a1f5e59dc68f06f770850eaed54bcd1c 151 Pfam PF00583 Acetyltransferase (GNAT) family 52 125 6.7E-12 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AY555_RS07975 a1f5e59dc68f06f770850eaed54bcd1c 151 PANTHER PTHR23091 41 151 6.1E-14 T 14-09-2016 AY555_RS07975 a1f5e59dc68f06f770850eaed54bcd1c 151 SUPERFAMILY SSF55729 41 148 8.02E-21 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AY555_RS06980 4bf2b4fdcacf16bc474a6e126b789716 263 SUPERFAMILY SSF51658 1 259 1.57E-77 T 14-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AY555_RS06980 4bf2b4fdcacf16bc474a6e126b789716 263 Pfam PF01261 Xylose isomerase-like TIM barrel 21 209 1.8E-31 T 14-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AY555_RS06980 4bf2b4fdcacf16bc474a6e126b789716 263 PIRSF PIRSF006241 1 260 4.9E-91 T 14-09-2016 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 AY555_RS06980 4bf2b4fdcacf16bc474a6e126b789716 263 Gene3D G3DSA:3.20.20.150 1 259 2.0E-82 T 14-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AY555_RS06980 4bf2b4fdcacf16bc474a6e126b789716 263 PANTHER PTHR12110 1 262 3.2E-99 T 14-09-2016 AY555_RS06980 4bf2b4fdcacf16bc474a6e126b789716 263 PANTHER PTHR12110:SF22 1 262 3.2E-99 T 14-09-2016 AY555_RS06570 17feeb98973f6ca1ca30d7a2eaf8856a 621 Pfam PF05876 Phage terminase large subunit (GpA) 43 581 8.3E-176 T 14-09-2016 IPR008866 Bacteriophage lambda, GpA AY555_RS06570 17feeb98973f6ca1ca30d7a2eaf8856a 621 Gene3D G3DSA:2.20.25.10 236 280 4.2E-4 T 14-09-2016 AY555_RS08325 9d2583e7090f1be3a3f23a9399e22f0a 457 PANTHER PTHR11806 11 454 5.9E-217 T 14-09-2016 AY555_RS08325 9d2583e7090f1be3a3f23a9399e22f0a 457 Pfam PF01134 Glucose inhibited division protein A 11 379 8.2E-111 T 14-09-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 AY555_RS08325 9d2583e7090f1be3a3f23a9399e22f0a 457 PANTHER PTHR11806:SF2 11 454 5.9E-217 T 14-09-2016 AY555_RS08325 9d2583e7090f1be3a3f23a9399e22f0a 457 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 349 372 - T 14-09-2016 IPR020595 MnmG-related, conserved site AY555_RS08325 9d2583e7090f1be3a3f23a9399e22f0a 457 TIGRFAM TIGR00137 gid_trmFO: tRNA:m(5)U-54 methyltransferase 10 452 3.2E-181 T 14-09-2016 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 AY555_RS08325 9d2583e7090f1be3a3f23a9399e22f0a 457 SUPERFAMILY SSF51905 7 378 4.36E-30 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS08325 9d2583e7090f1be3a3f23a9399e22f0a 457 Gene3D G3DSA:3.50.50.60 9 127 3.8E-9 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AY555_RS08325 9d2583e7090f1be3a3f23a9399e22f0a 457 Hamap MF_01037 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO [trmFO]. 11 453 35.988 T 14-09-2016 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 AY555_RS01090 6685192918d8b7aacdb428b335267a94 243 Pfam PF09955 Predicted integral membrane protein (DUF2189) 54 178 1.1E-34 T 14-09-2016 IPR018692 Predicted integral membrane protein DUF2189 AY555_RS03190 0d9da75b070f157f043db8526f7ebe53 194 SUPERFAMILY SSF53955 4 188 2.36E-33 T 14-09-2016 IPR023346 Lysozyme-like domain AY555_RS03190 0d9da75b070f157f043db8526f7ebe53 194 Pfam PF05838 Glycosyl hydrolase 108 10 108 1.2E-18 T 14-09-2016 IPR008565 Protein of unknown function DUF847 AY555_RS03190 0d9da75b070f157f043db8526f7ebe53 194 Pfam PF09374 Predicted Peptidoglycan domain 112 186 2.3E-15 T 14-09-2016 IPR018537 Peptidoglycan binding domain AY555_RS03190 0d9da75b070f157f043db8526f7ebe53 194 Gene3D G3DSA:1.20.141.10 1 189 6.5E-42 T 14-09-2016 AY555_RS00090 fdcea58dbaee2f00d47d0fddd4cc1f3f 254 Pfam PF00813 FliP family 54 246 1.7E-77 T 14-09-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AY555_RS00090 fdcea58dbaee2f00d47d0fddd4cc1f3f 254 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 71 91 3.4E-64 T 14-09-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AY555_RS00090 fdcea58dbaee2f00d47d0fddd4cc1f3f 254 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 179 199 3.4E-64 T 14-09-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AY555_RS00090 fdcea58dbaee2f00d47d0fddd4cc1f3f 254 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 224 249 3.4E-64 T 14-09-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AY555_RS00090 fdcea58dbaee2f00d47d0fddd4cc1f3f 254 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 200 221 3.4E-64 T 14-09-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AY555_RS00090 fdcea58dbaee2f00d47d0fddd4cc1f3f 254 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 52 71 3.4E-64 T 14-09-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AY555_RS00090 fdcea58dbaee2f00d47d0fddd4cc1f3f 254 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 91 110 3.4E-64 T 14-09-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AY555_RS00090 fdcea58dbaee2f00d47d0fddd4cc1f3f 254 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 179 194 - T 14-09-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AY555_RS00090 fdcea58dbaee2f00d47d0fddd4cc1f3f 254 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 227 239 - T 14-09-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AY555_RS00090 fdcea58dbaee2f00d47d0fddd4cc1f3f 254 PANTHER PTHR30587:SF0 1 252 3.1E-105 T 14-09-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AY555_RS00090 fdcea58dbaee2f00d47d0fddd4cc1f3f 254 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 54 250 3.2E-86 T 14-09-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AY555_RS00090 fdcea58dbaee2f00d47d0fddd4cc1f3f 254 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 150 162 9.3E-26 T 14-09-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AY555_RS00090 fdcea58dbaee2f00d47d0fddd4cc1f3f 254 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 172 184 9.3E-26 T 14-09-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AY555_RS00090 fdcea58dbaee2f00d47d0fddd4cc1f3f 254 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 50 59 9.3E-26 T 14-09-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AY555_RS00090 fdcea58dbaee2f00d47d0fddd4cc1f3f 254 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 240 250 9.3E-26 T 14-09-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AY555_RS00090 fdcea58dbaee2f00d47d0fddd4cc1f3f 254 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 122 136 9.3E-26 T 14-09-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AY555_RS00090 fdcea58dbaee2f00d47d0fddd4cc1f3f 254 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 110 122 9.3E-26 T 14-09-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AY555_RS00090 fdcea58dbaee2f00d47d0fddd4cc1f3f 254 PANTHER PTHR30587 1 252 3.1E-105 T 14-09-2016 AY555_RS07600 02c1a268eae4f7d173084bc7e05bccaa 418 SUPERFAMILY SSF53383 15 410 3.71E-122 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AY555_RS07600 02c1a268eae4f7d173084bc7e05bccaa 418 PANTHER PTHR11601:SF17 3 410 3.3E-182 T 14-09-2016 AY555_RS07600 02c1a268eae4f7d173084bc7e05bccaa 418 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 229 248 - T 14-09-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AY555_RS07600 02c1a268eae4f7d173084bc7e05bccaa 418 Pfam PF00266 Aminotransferase class-V 38 406 5.9E-140 T 14-09-2016 IPR000192 Aminotransferase class V domain AY555_RS07600 02c1a268eae4f7d173084bc7e05bccaa 418 Gene3D G3DSA:3.40.640.10 49 295 2.0E-86 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AY555_RS07600 02c1a268eae4f7d173084bc7e05bccaa 418 PANTHER PTHR11601 3 410 3.3E-182 T 14-09-2016 AY555_RS07600 02c1a268eae4f7d173084bc7e05bccaa 418 Gene3D G3DSA:3.90.1150.10 296 410 1.2E-23 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AY555_RS07600 02c1a268eae4f7d173084bc7e05bccaa 418 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 19 417 4.0E-169 T 14-09-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AY555_RS09220 9e88f699e5d06f7a150ca8dde3a68cb5 264 PANTHER PTHR34266:SF2 8 264 1.7E-147 T 14-09-2016 AY555_RS09220 9e88f699e5d06f7a150ca8dde3a68cb5 264 Gene3D G3DSA:3.20.20.70 21 240 6.7E-55 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS09220 9e88f699e5d06f7a150ca8dde3a68cb5 264 Pfam PF05690 Thiazole biosynthesis protein ThiG 15 259 4.5E-108 T 14-09-2016 AY555_RS09220 9e88f699e5d06f7a150ca8dde3a68cb5 264 SUPERFAMILY SSF110399 11 251 1.44E-89 T 14-09-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 AY555_RS09220 9e88f699e5d06f7a150ca8dde3a68cb5 264 Hamap MF_00443 Thiazole synthase [thiG]. 12 264 41.451 T 14-09-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 AY555_RS09220 9e88f699e5d06f7a150ca8dde3a68cb5 264 PANTHER PTHR34266 8 264 1.7E-147 T 14-09-2016 AY555_RS04715 a0932da950dc7b046814fb6eb1e1bbb5 354 SUPERFAMILY SSF81345 16 345 6.93E-77 T 14-09-2016 IPR029022 ABC transporter, BtuC-like AY555_RS04715 a0932da950dc7b046814fb6eb1e1bbb5 354 Pfam PF01032 FecCD transport family 27 344 6.1E-88 T 14-09-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 AY555_RS04715 a0932da950dc7b046814fb6eb1e1bbb5 354 Gene3D G3DSA:1.10.3470.10 17 350 7.2E-101 T 14-09-2016 IPR029022 ABC transporter, BtuC-like AY555_RS04715 a0932da950dc7b046814fb6eb1e1bbb5 354 PANTHER PTHR30472:SF3 11 352 4.3E-128 T 14-09-2016 AY555_RS04715 a0932da950dc7b046814fb6eb1e1bbb5 354 PANTHER PTHR30472 11 352 4.3E-128 T 14-09-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 AY555_RS01940 7b285436472e1d89e2485f0590e363e7 341 PANTHER PTHR32338 1 341 5.6E-104 T 14-09-2016 AY555_RS01940 7b285436472e1d89e2485f0590e363e7 341 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 6 336 1.2E-89 T 14-09-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AY555_RS01940 7b285436472e1d89e2485f0590e363e7 341 SMART SM00859 7 143 1.2E-40 T 14-09-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AY555_RS01940 7b285436472e1d89e2485f0590e363e7 341 PANTHER PTHR32338:SF8 1 341 5.6E-104 T 14-09-2016 AY555_RS01940 7b285436472e1d89e2485f0590e363e7 341 SUPERFAMILY SSF51735 4 169 1.75E-41 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS01940 7b285436472e1d89e2485f0590e363e7 341 Gene3D G3DSA:3.40.50.720 4 157 1.5E-45 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS01940 7b285436472e1d89e2485f0590e363e7 341 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 8 138 1.5E-24 T 14-09-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AY555_RS01940 7b285436472e1d89e2485f0590e363e7 341 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 6 334 32.122 T 14-09-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AY555_RS01940 7b285436472e1d89e2485f0590e363e7 341 SUPERFAMILY SSF55347 152 308 9.48E-23 T 14-09-2016 AY555_RS01940 7b285436472e1d89e2485f0590e363e7 341 Gene3D G3DSA:3.30.360.10 158 308 3.8E-26 T 14-09-2016 AY555_RS00850 081539c7443788baaec5cedb2e5f0223 130 SUPERFAMILY SSF53137 15 130 2.22E-49 T 14-09-2016 AY555_RS00850 081539c7443788baaec5cedb2e5f0223 130 Gene3D G3DSA:3.30.420.80 10 130 2.2E-55 T 14-09-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AY555_RS00850 081539c7443788baaec5cedb2e5f0223 130 PIRSF PIRSF002131 1 130 7.1E-53 T 14-09-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AY555_RS00850 081539c7443788baaec5cedb2e5f0223 130 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 130 33.642 T 14-09-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AY555_RS00850 081539c7443788baaec5cedb2e5f0223 130 ProSitePatterns PS00054 Ribosomal protein S11 signature. 98 120 - T 14-09-2016 IPR018102 Ribosomal S11, conserved site AY555_RS00850 081539c7443788baaec5cedb2e5f0223 130 Pfam PF00411 Ribosomal protein S11 20 129 3.3E-50 T 14-09-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AY555_RS00850 081539c7443788baaec5cedb2e5f0223 130 PANTHER PTHR11759 11 130 1.9E-71 T 14-09-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AY555_RS00850 081539c7443788baaec5cedb2e5f0223 130 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 11 127 1.9E-57 T 14-09-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS05110 164f5d7a3e998d300b52e5553d7c0a56 520 Pfam PF13742 OB-fold nucleic acid binding domain 20 111 1.5E-23 T 14-09-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 AY555_RS05110 164f5d7a3e998d300b52e5553d7c0a56 520 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 20 362 1.1E-113 T 14-09-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AY555_RS05110 164f5d7a3e998d300b52e5553d7c0a56 520 PANTHER PTHR30008:SF0 360 510 8.6E-139 T 14-09-2016 AY555_RS05110 164f5d7a3e998d300b52e5553d7c0a56 520 PANTHER PTHR30008:SF0 13 318 8.6E-139 T 14-09-2016 AY555_RS05110 164f5d7a3e998d300b52e5553d7c0a56 520 Pfam PF02601 Exonuclease VII, large subunit 135 493 1.2E-89 T 14-09-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 AY555_RS05110 164f5d7a3e998d300b52e5553d7c0a56 520 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 16 498 26.783 T 14-09-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AY555_RS05110 164f5d7a3e998d300b52e5553d7c0a56 520 PANTHER PTHR30008 360 510 8.6E-139 T 14-09-2016 AY555_RS05110 164f5d7a3e998d300b52e5553d7c0a56 520 PANTHER PTHR30008 13 318 8.6E-139 T 14-09-2016 AY555_RS01410 3d1178f7ce635eb01d8612973d23ddc1 112 Gene3D G3DSA:3.30.160.100 5 110 3.8E-17 T 14-09-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AY555_RS01410 3d1178f7ce635eb01d8612973d23ddc1 112 SUPERFAMILY SSF69754 5 111 1.22E-17 T 14-09-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AY555_RS01410 3d1178f7ce635eb01d8612973d23ddc1 112 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 5 111 8.4E-13 T 14-09-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AY555_RS05125 8bcffc5a805794869ee5072522c3da9b 389 Pfam PF13439 Glycosyltransferase Family 4 27 183 8.0E-29 T 14-09-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AY555_RS05125 8bcffc5a805794869ee5072522c3da9b 389 Gene3D G3DSA:3.40.50.2000 163 362 2.9E-26 T 14-09-2016 AY555_RS05125 8bcffc5a805794869ee5072522c3da9b 389 SUPERFAMILY SSF53756 16 388 1.88E-85 T 14-09-2016 AY555_RS05125 8bcffc5a805794869ee5072522c3da9b 389 Pfam PF00534 Glycosyl transferases group 1 198 357 3.1E-26 T 14-09-2016 IPR001296 Glycosyl transferase, family 1 AY555_RS05125 8bcffc5a805794869ee5072522c3da9b 389 PANTHER PTHR12526 15 389 5.5E-60 T 14-09-2016 AY555_RS01235 8f891361c4b29cf0c8942c31ff7470ba 294 PANTHER PTHR12862 4 288 1.6E-51 T 14-09-2016 AY555_RS01235 8f891361c4b29cf0c8942c31ff7470ba 294 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 11 288 4.0E-36 T 14-09-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type AY555_RS01235 8f891361c4b29cf0c8942c31ff7470ba 294 Gene3D G3DSA:3.30.420.40 144 272 3.2E-4 T 14-09-2016 AY555_RS01235 8f891361c4b29cf0c8942c31ff7470ba 294 SUPERFAMILY SSF53067 120 288 1.88E-43 T 14-09-2016 AY555_RS01235 8f891361c4b29cf0c8942c31ff7470ba 294 PANTHER PTHR12862:SF5 4 288 1.6E-51 T 14-09-2016 AY555_RS01235 8f891361c4b29cf0c8942c31ff7470ba 294 SUPERFAMILY SSF53067 7 116 4.53E-17 T 14-09-2016 AY555_RS03120 c613572e0d966f51db972d46038af962 333 Gene3D G3DSA:1.10.240.10 206 297 5.4E-14 T 14-09-2016 AY555_RS03120 c613572e0d966f51db972d46038af962 333 PANTHER PTHR10055 1 333 1.2E-167 T 14-09-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 AY555_RS03120 c613572e0d966f51db972d46038af962 333 Gene3D G3DSA:3.40.50.620 2 205 7.2E-87 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS03120 c613572e0d966f51db972d46038af962 333 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 19 - T 14-09-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS03120 c613572e0d966f51db972d46038af962 333 Pfam PF00579 tRNA synthetases class I (W and Y) 3 258 4.6E-77 T 14-09-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AY555_RS03120 c613572e0d966f51db972d46038af962 333 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 14 30 2.7E-28 T 14-09-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 AY555_RS03120 c613572e0d966f51db972d46038af962 333 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 195 205 2.7E-28 T 14-09-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 AY555_RS03120 c613572e0d966f51db972d46038af962 333 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 65 84 2.7E-28 T 14-09-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 AY555_RS03120 c613572e0d966f51db972d46038af962 333 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 141 162 2.7E-28 T 14-09-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 AY555_RS03120 c613572e0d966f51db972d46038af962 333 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 2 330 3.0E-94 T 14-09-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 AY555_RS03120 c613572e0d966f51db972d46038af962 333 PANTHER PTHR10055:SF10 1 333 1.2E-167 T 14-09-2016 AY555_RS03120 c613572e0d966f51db972d46038af962 333 SUPERFAMILY SSF52374 1 330 2.55E-91 T 14-09-2016 AY555_RS03120 c613572e0d966f51db972d46038af962 333 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 1 331 39.497 T 14-09-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 AY555_RS08845 27e546395affd00a418f2058feeae93b 224 PANTHER PTHR33693 11 216 7.5E-62 T 14-09-2016 AY555_RS08845 27e546395affd00a418f2058feeae93b 224 Gene3D G3DSA:3.40.470.10 21 219 2.8E-50 T 14-09-2016 IPR005122 Uracil-DNA glycosylase-like AY555_RS08845 27e546395affd00a418f2058feeae93b 224 SMART SM00987 48 215 1.1E-29 T 14-09-2016 AY555_RS08845 27e546395affd00a418f2058feeae93b 224 Pfam PF03167 Uracil DNA glycosylase superfamily 49 218 4.7E-28 T 14-09-2016 IPR005122 Uracil-DNA glycosylase-like AY555_RS08845 27e546395affd00a418f2058feeae93b 224 SMART SM00986 48 215 1.1E-29 T 14-09-2016 IPR005122 Uracil-DNA glycosylase-like AY555_RS08845 27e546395affd00a418f2058feeae93b 224 PANTHER PTHR33693:SF2 11 216 7.5E-62 T 14-09-2016 AY555_RS08845 27e546395affd00a418f2058feeae93b 224 SUPERFAMILY SSF52141 22 221 1.34E-43 T 14-09-2016 IPR005122 Uracil-DNA glycosylase-like AY555_RS01930 0cdbcd483a6d9015e061478ca57e8c35 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 213 1.1E-20 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS01930 0cdbcd483a6d9015e061478ca57e8c35 225 Gene3D G3DSA:1.10.3720.10 9 213 4.9E-41 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS01930 0cdbcd483a6d9015e061478ca57e8c35 225 PANTHER PTHR30614 2 218 4.9E-55 T 14-09-2016 AY555_RS01930 0cdbcd483a6d9015e061478ca57e8c35 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 107 3.8E-22 T 14-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AY555_RS01930 0cdbcd483a6d9015e061478ca57e8c35 225 SUPERFAMILY SSF161098 11 198 2.75E-37 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS03345 5c984f9539b671b10a7ae8712911a6be 337 SUPERFAMILY SSF51735 9 326 2.78E-67 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS03345 5c984f9539b671b10a7ae8712911a6be 337 PANTHER PTHR10366 9 325 1.9E-103 T 14-09-2016 AY555_RS03345 5c984f9539b671b10a7ae8712911a6be 337 PANTHER PTHR10366:SF234 9 325 1.9E-103 T 14-09-2016 AY555_RS03345 5c984f9539b671b10a7ae8712911a6be 337 Gene3D G3DSA:3.40.50.720 9 238 7.3E-47 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS03345 5c984f9539b671b10a7ae8712911a6be 337 Gene3D G3DSA:3.90.25.10 297 323 1.9E-9 T 14-09-2016 AY555_RS03345 5c984f9539b671b10a7ae8712911a6be 337 Pfam PF01370 NAD dependent epimerase/dehydratase family 10 246 1.7E-37 T 14-09-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AY555_RS01790 7adda8ffb2f172245090bae7e3af2fb8 249 PANTHER PTHR32119:SF2 1 245 2.0E-84 T 14-09-2016 AY555_RS01790 7adda8ffb2f172245090bae7e3af2fb8 249 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 4 238 33.699 T 14-09-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 AY555_RS01790 7adda8ffb2f172245090bae7e3af2fb8 249 SUPERFAMILY SSF51366 4 237 5.6E-64 T 14-09-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AY555_RS01790 7adda8ffb2f172245090bae7e3af2fb8 249 Gene3D G3DSA:3.20.20.70 5 237 5.6E-75 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS01790 7adda8ffb2f172245090bae7e3af2fb8 249 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 7 233 3.7E-45 T 14-09-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 AY555_RS01790 7adda8ffb2f172245090bae7e3af2fb8 249 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 60 73 - T 14-09-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 AY555_RS01790 7adda8ffb2f172245090bae7e3af2fb8 249 SMART SM00934 6 233 6.9E-80 T 14-09-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 AY555_RS01790 7adda8ffb2f172245090bae7e3af2fb8 249 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 6 233 2.1E-38 T 14-09-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 AY555_RS01790 7adda8ffb2f172245090bae7e3af2fb8 249 PANTHER PTHR32119 1 245 2.0E-84 T 14-09-2016 AY555_RS05970 5dd4e2be72d4a8a00b9ce298a293a000 163 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 11 150 3.7E-15 T 14-09-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 AY555_RS05970 5dd4e2be72d4a8a00b9ce298a293a000 163 Pfam PF04093 rod shape-determining protein MreD 8 149 6.1E-13 T 14-09-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 AY555_RS05475 158d2f180c1b8326ed6639355702ebc3 124 Pfam PF13649 Methyltransferase domain 35 100 2.7E-11 T 14-09-2016 AY555_RS05475 158d2f180c1b8326ed6639355702ebc3 124 Gene3D G3DSA:3.40.50.150 5 94 3.0E-16 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS05475 158d2f180c1b8326ed6639355702ebc3 124 PANTHER PTHR10108 35 99 2.8E-12 T 14-09-2016 AY555_RS05475 158d2f180c1b8326ed6639355702ebc3 124 SUPERFAMILY SSF53335 33 97 6.63E-18 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS05385 5556c13f9ad344696d5386276c358481 496 SUPERFAMILY SSF55486 5 495 5.06E-105 T 14-09-2016 AY555_RS05385 5556c13f9ad344696d5386276c358481 496 PIRSF PIRSF006615 3 496 7.1E-170 T 14-09-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 AY555_RS05385 5556c13f9ad344696d5386276c358481 496 PANTHER PTHR34217:SF1 1 496 3.6E-205 T 14-09-2016 AY555_RS05385 5556c13f9ad344696d5386276c358481 496 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 15 491 5.8E-79 T 14-09-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 AY555_RS05385 5556c13f9ad344696d5386276c358481 496 PANTHER PTHR34217 1 496 3.6E-205 T 14-09-2016 AY555_RS05385 5556c13f9ad344696d5386276c358481 496 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 244 263 9.0E-44 T 14-09-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 AY555_RS05385 5556c13f9ad344696d5386276c358481 496 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 378 395 9.0E-44 T 14-09-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 AY555_RS05385 5556c13f9ad344696d5386276c358481 496 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 149 169 9.0E-44 T 14-09-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 AY555_RS05385 5556c13f9ad344696d5386276c358481 496 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 446 464 9.0E-44 T 14-09-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 AY555_RS05385 5556c13f9ad344696d5386276c358481 496 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 264 283 9.0E-44 T 14-09-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 AY555_RS05385 5556c13f9ad344696d5386276c358481 496 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 401 422 9.0E-44 T 14-09-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 AY555_RS05385 5556c13f9ad344696d5386276c358481 496 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 291 307 9.0E-44 T 14-09-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 AY555_RS05385 5556c13f9ad344696d5386276c358481 496 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 332 351 9.0E-44 T 14-09-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 AY555_RS06780 69cb77d202eea36d58f923e08e1df4a8 593 Pfam PF01343 Peptidase family S49 118 272 8.2E-27 T 14-09-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AY555_RS06780 69cb77d202eea36d58f923e08e1df4a8 593 Pfam PF01343 Peptidase family S49 369 519 1.2E-44 T 14-09-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AY555_RS06780 69cb77d202eea36d58f923e08e1df4a8 593 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 17 528 4.3E-98 T 14-09-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 AY555_RS06780 69cb77d202eea36d58f923e08e1df4a8 593 Gene3D G3DSA:3.90.226.10 72 153 2.6E-28 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AY555_RS06780 69cb77d202eea36d58f923e08e1df4a8 593 Gene3D G3DSA:3.90.226.10 236 278 2.6E-28 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AY555_RS06780 69cb77d202eea36d58f923e08e1df4a8 593 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 324 517 5.3E-49 T 14-09-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 AY555_RS06780 69cb77d202eea36d58f923e08e1df4a8 593 Gene3D G3DSA:3.90.226.10 447 523 3.2E-54 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AY555_RS06780 69cb77d202eea36d58f923e08e1df4a8 593 Gene3D G3DSA:3.90.226.10 286 409 3.2E-54 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AY555_RS06780 69cb77d202eea36d58f923e08e1df4a8 593 SUPERFAMILY SSF52096 74 170 3.07E-19 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AY555_RS06780 69cb77d202eea36d58f923e08e1df4a8 593 SUPERFAMILY SSF52096 203 264 3.07E-19 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AY555_RS06780 69cb77d202eea36d58f923e08e1df4a8 593 Gene3D G3DSA:3.40.1750.10 154 231 2.5E-15 T 14-09-2016 AY555_RS06780 69cb77d202eea36d58f923e08e1df4a8 593 PIRSF PIRSF001217 2 579 3.7E-147 T 14-09-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 AY555_RS06780 69cb77d202eea36d58f923e08e1df4a8 593 PANTHER PTHR33209 69 529 5.3E-160 T 14-09-2016 AY555_RS06780 69cb77d202eea36d58f923e08e1df4a8 593 PANTHER PTHR33209:SF1 69 529 5.3E-160 T 14-09-2016 AY555_RS06780 69cb77d202eea36d58f923e08e1df4a8 593 SUPERFAMILY SSF52096 446 506 9.95E-37 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AY555_RS06780 69cb77d202eea36d58f923e08e1df4a8 593 SUPERFAMILY SSF52096 295 417 9.95E-37 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AY555_RS01760 f34b75c4e1d76f498ffc3c3222cd5624 480 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 13 480 3.2E-171 T 14-09-2016 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 AY555_RS01760 f34b75c4e1d76f498ffc3c3222cd5624 480 TIGRFAM TIGR03810 arg_ornith_anti: arginine-ornithine antiporter 12 479 7.8E-187 T 14-09-2016 IPR022461 Arginine/ornithine antiporter GO:0005887|GO:0006527|GO:0043858 AY555_RS01760 f34b75c4e1d76f498ffc3c3222cd5624 480 PANTHER PTHR11785 13 471 1.6E-195 T 14-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AY555_RS01760 f34b75c4e1d76f498ffc3c3222cd5624 480 PIRSF PIRSF006060 2 477 1.6E-40 T 14-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AY555_RS01760 f34b75c4e1d76f498ffc3c3222cd5624 480 PANTHER PTHR11785:SF77 13 471 1.6E-195 T 14-09-2016 AY555_RS01760 f34b75c4e1d76f498ffc3c3222cd5624 480 Pfam PF13520 Amino acid permease 17 420 5.3E-63 T 14-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AY555_RS03995 63971eacd698d0c9771c6421e6fcb0ad 153 Pfam PF06347 Bacterial SH3 domain 28 82 3.3E-19 T 14-09-2016 IPR010466 Protein of unknown function DUF1058 AY555_RS03995 63971eacd698d0c9771c6421e6fcb0ad 153 Pfam PF06347 Bacterial SH3 domain 92 145 1.0E-8 T 14-09-2016 IPR010466 Protein of unknown function DUF1058 AY555_RS02525 fb3570a12701beb61300547faf81f107 501 Pfam PF00266 Aminotransferase class-V 160 285 3.4E-8 T 14-09-2016 IPR000192 Aminotransferase class V domain AY555_RS02525 fb3570a12701beb61300547faf81f107 501 Gene3D G3DSA:3.40.640.10 104 304 1.5E-29 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AY555_RS02525 fb3570a12701beb61300547faf81f107 501 Gene3D G3DSA:3.40.640.10 337 362 1.5E-29 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AY555_RS02525 fb3570a12701beb61300547faf81f107 501 SUPERFAMILY SSF53383 42 497 1.18E-93 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AY555_RS02525 fb3570a12701beb61300547faf81f107 501 PANTHER PTHR11773 17 497 1.0E-184 T 14-09-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 AY555_RS09790 57e8c2732945cc08ac7a81d685e527e6 257 PANTHER PTHR40041:SF2 38 257 2.8E-28 T 14-09-2016 AY555_RS09790 57e8c2732945cc08ac7a81d685e527e6 257 PANTHER PTHR40041 38 257 2.8E-28 T 14-09-2016 AY555_RS09790 57e8c2732945cc08ac7a81d685e527e6 257 Pfam PF02517 CAAX protease self-immunity 149 243 9.0E-15 T 14-09-2016 IPR003675 CAAX amino terminal protease GO:0016020 AY555_RS03230 5130224216ea4c2c6a4dda36b1dac76e 268 Pfam PF01061 ABC-2 type transporter 31 223 1.6E-11 T 14-09-2016 IPR013525 ABC-2 type transporter GO:0016020 AY555_RS04050 fa3e49d98d1ec47d98b7107acf1ef76e 141 PANTHER PTHR33202:SF3 14 140 1.5E-40 T 14-09-2016 AY555_RS04050 fa3e49d98d1ec47d98b7107acf1ef76e 141 PANTHER PTHR33202 14 140 1.5E-40 T 14-09-2016 AY555_RS04050 fa3e49d98d1ec47d98b7107acf1ef76e 141 SUPERFAMILY SSF46785 13 124 9.72E-27 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS04050 fa3e49d98d1ec47d98b7107acf1ef76e 141 Pfam PF01475 Ferric uptake regulator family 19 116 5.4E-20 T 14-09-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AY555_RS04050 fa3e49d98d1ec47d98b7107acf1ef76e 141 Gene3D G3DSA:1.10.10.10 12 93 1.2E-24 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS01745 2a62a79a4a6c29d21acf599fc03348ff 294 PANTHER PTHR10264 11 286 7.5E-73 T 14-09-2016 IPR001972 Stomatin family GO:0016020 AY555_RS01745 2a62a79a4a6c29d21acf599fc03348ff 294 PANTHER PTHR10264:SF80 11 286 7.5E-73 T 14-09-2016 AY555_RS01745 2a62a79a4a6c29d21acf599fc03348ff 294 SUPERFAMILY SSF117892 54 190 3.66E-21 T 14-09-2016 IPR001107 Band 7 domain AY555_RS01745 2a62a79a4a6c29d21acf599fc03348ff 294 Pfam PF01145 SPFH domain / Band 7 family 26 201 1.3E-28 T 14-09-2016 IPR001107 Band 7 domain AY555_RS01745 2a62a79a4a6c29d21acf599fc03348ff 294 PIRSF PIRSF005651 3 292 2.1E-87 T 14-09-2016 IPR010200 HflC GO:0016021|GO:0052547 AY555_RS01745 2a62a79a4a6c29d21acf599fc03348ff 294 SMART SM00244 22 184 1.0E-22 T 14-09-2016 IPR001107 Band 7 domain AY555_RS04945 3144b0fa3bc767462ea893aadc2d30cd 98 SUPERFAMILY SSF46785 21 95 9.78E-12 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS04945 3144b0fa3bc767462ea893aadc2d30cd 98 Gene3D G3DSA:1.10.10.10 21 95 9.0E-13 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS04155 389211501310de325b63682ea2c03593 341 PANTHER PTHR33540 21 335 6.3E-49 T 14-09-2016 AY555_RS04155 389211501310de325b63682ea2c03593 341 SUPERFAMILY SSF56112 19 325 2.33E-43 T 14-09-2016 IPR011009 Protein kinase-like domain AY555_RS04155 389211501310de325b63682ea2c03593 341 Gene3D G3DSA:3.90.1200.10 105 336 1.9E-55 T 14-09-2016 AY555_RS04155 389211501310de325b63682ea2c03593 341 Pfam PF01636 Phosphotransferase enzyme family 35 266 6.1E-27 T 14-09-2016 IPR002575 Aminoglycoside phosphotransferase AY555_RS04155 389211501310de325b63682ea2c03593 341 PANTHER PTHR33540:SF1 21 335 6.3E-49 T 14-09-2016 AY555_RS04155 389211501310de325b63682ea2c03593 341 Gene3D G3DSA:3.30.200.20 14 103 2.1E-29 T 14-09-2016 AY555_RS03130 19e221feee30a08e968ee12fec393721 247 PANTHER PTHR23291 5 247 5.2E-70 T 14-09-2016 IPR006214 Bax inhibitor 1-related AY555_RS03130 19e221feee30a08e968ee12fec393721 247 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 26 242 7.8E-60 T 14-09-2016 AY555_RS03130 19e221feee30a08e968ee12fec393721 247 PANTHER PTHR23291:SF42 5 247 5.2E-70 T 14-09-2016 AY555_RS03235 36076affed24a089ce4558ebbecad817 258 Gene3D G3DSA:3.40.50.300 7 236 4.8E-58 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS03235 36076affed24a089ce4558ebbecad817 258 Pfam PF00005 ABC transporter 30 171 1.1E-25 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AY555_RS03235 36076affed24a089ce4558ebbecad817 258 SUPERFAMILY SSF52540 8 236 7.04E-57 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS03235 36076affed24a089ce4558ebbecad817 258 SMART SM00382 38 228 2.3E-14 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS03235 36076affed24a089ce4558ebbecad817 258 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AY555_RS03235 36076affed24a089ce4558ebbecad817 258 PANTHER PTHR24220 11 248 1.0E-71 T 14-09-2016 AY555_RS08955 9e5342ffa3a3a3245411184b2c95e3aa 238 Gene3D G3DSA:3.40.190.10 26 108 1.7E-6 T 14-09-2016 AY555_RS08955 9e5342ffa3a3a3245411184b2c95e3aa 238 Gene3D G3DSA:3.40.190.10 199 234 1.7E-6 T 14-09-2016 AY555_RS08955 9e5342ffa3a3a3245411184b2c95e3aa 238 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 234 1.8E-11 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AY555_RS08955 9e5342ffa3a3a3245411184b2c95e3aa 238 Gene3D G3DSA:3.40.190.10 110 187 8.9E-5 T 14-09-2016 AY555_RS08955 9e5342ffa3a3a3245411184b2c95e3aa 238 SUPERFAMILY SSF53850 24 236 2.76E-27 T 14-09-2016 AY555_RS08955 9e5342ffa3a3a3245411184b2c95e3aa 238 PANTHER PTHR38834 1 235 2.5E-30 T 14-09-2016 AY555_RS00275 2e5b9f23f6216018d9f829673d5bc518 192 SUPERFAMILY SSF55729 25 171 9.53E-18 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AY555_RS00275 2e5b9f23f6216018d9f829673d5bc518 192 Pfam PF13673 Acetyltransferase (GNAT) domain 57 173 3.8E-16 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AY555_RS00275 2e5b9f23f6216018d9f829673d5bc518 192 Gene3D G3DSA:3.40.630.30 25 180 8.5E-22 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AY555_RS04530 a6c91a1595d50c93d1a0555d22e9e7ea 183 Gene3D G3DSA:1.10.3210.10 47 173 4.3E-6 T 14-09-2016 IPR006674 HD domain AY555_RS04220 7211bc9b6a26d886b0e406fafe5d5dc6 146 SUPERFAMILY SSF55729 6 134 1.45E-26 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AY555_RS04220 7211bc9b6a26d886b0e406fafe5d5dc6 146 Gene3D G3DSA:3.40.630.30 7 145 5.8E-26 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AY555_RS04220 7211bc9b6a26d886b0e406fafe5d5dc6 146 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 15 146 2.2E-25 T 14-09-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 AY555_RS04220 7211bc9b6a26d886b0e406fafe5d5dc6 146 PANTHER PTHR23091 5 146 9.8E-21 T 14-09-2016 AY555_RS04220 7211bc9b6a26d886b0e406fafe5d5dc6 146 Pfam PF00583 Acetyltransferase (GNAT) family 51 122 1.1E-13 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AY555_RS05035 25c7ee829263fea3db6deee1a70aada5 102 PANTHER PTHR38598 2 102 3.8E-42 T 14-09-2016 AY555_RS05035 25c7ee829263fea3db6deee1a70aada5 102 Pfam PF04341 Protein of unknown function, DUF485 11 99 7.2E-34 T 14-09-2016 IPR007436 Protein of unknown function DUF485 AY555_RS06970 b8657f921b93cd65ddf0cec5ec244432 624 Gene3D G3DSA:3.30.450.20 474 590 1.4E-18 T 14-09-2016 AY555_RS06970 b8657f921b93cd65ddf0cec5ec244432 624 Pfam PF08447 PAS fold 506 588 1.3E-10 T 14-09-2016 IPR013655 PAS fold-3 GO:0005515 AY555_RS06970 b8657f921b93cd65ddf0cec5ec244432 624 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 481 584 3.9E-10 T 14-09-2016 IPR000014 PAS domain AY555_RS06970 b8657f921b93cd65ddf0cec5ec244432 624 Pfam PF13426 PAS domain 376 468 7.3E-4 T 14-09-2016 IPR000014 PAS domain AY555_RS06970 b8657f921b93cd65ddf0cec5ec244432 624 Gene3D G3DSA:3.30.450.20 380 468 8.3E-10 T 14-09-2016 AY555_RS06970 b8657f921b93cd65ddf0cec5ec244432 624 PANTHER PTHR24423 331 607 7.7E-14 T 14-09-2016 AY555_RS06970 b8657f921b93cd65ddf0cec5ec244432 624 SUPERFAMILY SSF55785 472 592 1.29E-15 T 14-09-2016 IPR000014 PAS domain AY555_RS06970 b8657f921b93cd65ddf0cec5ec244432 624 SUPERFAMILY SSF55785 372 468 3.49E-8 T 14-09-2016 IPR000014 PAS domain AY555_RS00810 65c4846cd88aebf864f30ca5f5f3e321 716 PANTHER PTHR30441 10 702 1.4E-23 T 14-09-2016 AY555_RS00810 65c4846cd88aebf864f30ca5f5f3e321 716 Pfam PF05170 AsmA family 8 183 5.1E-21 T 14-09-2016 IPR007844 AsmA AY555_RS00810 65c4846cd88aebf864f30ca5f5f3e321 716 Pfam PF05170 AsmA family 328 564 6.4E-18 T 14-09-2016 IPR007844 AsmA AY555_RS02740 e566ad3d4e3e788131a6866ecf4f475f 163 Pfam PF06890 Bacteriophage Mu Gp45 protein 22 139 1.8E-23 T 14-09-2016 IPR014462 Phage-associated protein Gp45 AY555_RS02740 e566ad3d4e3e788131a6866ecf4f475f 163 PIRSF PIRSF012337 1 155 4.2E-31 T 14-09-2016 IPR014462 Phage-associated protein Gp45 AY555_RS02740 e566ad3d4e3e788131a6866ecf4f475f 163 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 13 143 1.0E-14 T 14-09-2016 IPR013046 Phage baseplate assembly protein V/Gp45 AY555_RS07970 16ae589c3b88f57710ada87ca738e05b 127 Pfam PF07007 Protein of unknown function (DUF1311) 37 120 7.3E-15 T 14-09-2016 IPR009739 Protein of unknown function DUF1311 AY555_RS07555 26a081d58bc71157a4b9a09a13513d7b 387 Pfam PF08548 Peptidase M10 serralysin C terminal 37 99 3.4E-5 T 14-09-2016 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 AY555_RS07555 26a081d58bc71157a4b9a09a13513d7b 387 Pfam PF08548 Peptidase M10 serralysin C terminal 183 309 1.4E-11 T 14-09-2016 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 AY555_RS07555 26a081d58bc71157a4b9a09a13513d7b 387 Gene3D G3DSA:2.150.10.10 227 305 5.3E-27 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS07555 26a081d58bc71157a4b9a09a13513d7b 387 Gene3D G3DSA:2.150.10.10 173 188 5.3E-27 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS07555 26a081d58bc71157a4b9a09a13513d7b 387 Gene3D G3DSA:2.150.10.10 8 108 5.3E-27 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS07555 26a081d58bc71157a4b9a09a13513d7b 387 PRINTS PR00313 NodO calcium binding signature 155 163 1.1E-11 T 14-09-2016 AY555_RS07555 26a081d58bc71157a4b9a09a13513d7b 387 PRINTS PR00313 NodO calcium binding signature 79 90 1.1E-11 T 14-09-2016 AY555_RS07555 26a081d58bc71157a4b9a09a13513d7b 387 PRINTS PR00313 NodO calcium binding signature 247 255 1.1E-11 T 14-09-2016 AY555_RS07555 26a081d58bc71157a4b9a09a13513d7b 387 PRINTS PR00313 NodO calcium binding signature 265 274 1.1E-11 T 14-09-2016 AY555_RS07555 26a081d58bc71157a4b9a09a13513d7b 387 SUPERFAMILY SSF51120 6 105 1.57E-15 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS07555 26a081d58bc71157a4b9a09a13513d7b 387 SUPERFAMILY SSF51120 152 191 1.57E-15 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS07555 26a081d58bc71157a4b9a09a13513d7b 387 SUPERFAMILY SSF51120 152 312 6.63E-28 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS07555 26a081d58bc71157a4b9a09a13513d7b 387 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 27 42 38.0 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS07555 26a081d58bc71157a4b9a09a13513d7b 387 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 247 263 0.08 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS07555 26a081d58bc71157a4b9a09a13513d7b 387 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 154 166 6.7 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS07555 26a081d58bc71157a4b9a09a13513d7b 387 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 81 93 0.7 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS07555 26a081d58bc71157a4b9a09a13513d7b 387 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 100 111 13.0 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS07555 26a081d58bc71157a4b9a09a13513d7b 387 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 172 189 0.38 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS07555 26a081d58bc71157a4b9a09a13513d7b 387 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 228 240 1.7 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS07880 3cec2bf5b9b36597814c75bd8065c378 338 PANTHER PTHR11082 11 315 6.9E-144 T 14-09-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AY555_RS07880 3cec2bf5b9b36597814c75bd8065c378 338 SUPERFAMILY SSF51395 11 321 1.42E-66 T 14-09-2016 AY555_RS07880 3cec2bf5b9b36597814c75bd8065c378 338 Gene3D G3DSA:3.20.20.70 11 252 9.8E-66 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS07880 3cec2bf5b9b36597814c75bd8065c378 338 Pfam PF01207 Dihydrouridine synthase (Dus) 14 314 6.6E-75 T 14-09-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AY555_RS07880 3cec2bf5b9b36597814c75bd8065c378 338 PIRSF PIRSF006621 1 330 2.7E-67 T 14-09-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AY555_RS07880 3cec2bf5b9b36597814c75bd8065c378 338 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 93 111 - T 14-09-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AY555_RS07880 3cec2bf5b9b36597814c75bd8065c378 338 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 11 326 2.9E-129 T 14-09-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 AY555_RS07880 3cec2bf5b9b36597814c75bd8065c378 338 PANTHER PTHR11082:SF29 11 315 6.9E-144 T 14-09-2016 AY555_RS07880 3cec2bf5b9b36597814c75bd8065c378 338 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 6 328 49.458 T 14-09-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 AY555_RS02795 6c918891ef09a2ebcf2f08048c8d230c 189 TIGRFAM TIGR02215 phage_chp_gp8: phage conserved hypothetical protein, phiE125 gp8 family 1 184 3.6E-34 T 14-09-2016 IPR011738 Phage conserved hypothetical protein AY555_RS02795 6c918891ef09a2ebcf2f08048c8d230c 189 Pfam PF05135 Phage gp6-like head-tail connector protein 13 71 5.1E-9 T 14-09-2016 IPR021146 Phage gp6-like head-tail connector protein AY555_RS03145 8be30e97278765f5c7cc47ff63e3e401 218 Gene3D G3DSA:3.40.50.1110 24 201 3.0E-55 T 14-09-2016 IPR013830 SGNH hydrolase-type esterase domain AY555_RS03145 8be30e97278765f5c7cc47ff63e3e401 218 PANTHER PTHR30383 25 201 7.4E-40 T 14-09-2016 AY555_RS03145 8be30e97278765f5c7cc47ff63e3e401 218 SUPERFAMILY SSF52266 21 200 1.27E-49 T 14-09-2016 IPR013830 SGNH hydrolase-type esterase domain AY555_RS03145 8be30e97278765f5c7cc47ff63e3e401 218 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 28 188 2.7E-24 T 14-09-2016 IPR013830 SGNH hydrolase-type esterase domain AY555_RS01805 cd141a64d9432546c2af0500b0c8b411 325 Gene3D G3DSA:3.30.200.20 1 104 1.1E-38 T 14-09-2016 AY555_RS01805 cd141a64d9432546c2af0500b0c8b411 325 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 307 5.1E-113 T 14-09-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 AY555_RS01805 cd141a64d9432546c2af0500b0c8b411 325 Gene3D G3DSA:3.90.1200.10 107 311 3.0E-61 T 14-09-2016 AY555_RS01805 cd141a64d9432546c2af0500b0c8b411 325 Hamap MF_00301 Homoserine kinase [thrB]. 1 325 155.695 T 14-09-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 AY555_RS01805 cd141a64d9432546c2af0500b0c8b411 325 PANTHER PTHR21064 7 305 7.2E-50 T 14-09-2016 AY555_RS01805 cd141a64d9432546c2af0500b0c8b411 325 SUPERFAMILY SSF56112 5 309 8.28E-83 T 14-09-2016 IPR011009 Protein kinase-like domain AY555_RS01805 cd141a64d9432546c2af0500b0c8b411 325 Pfam PF01636 Phosphotransferase enzyme family 28 257 2.0E-37 T 14-09-2016 IPR002575 Aminoglycoside phosphotransferase AY555_RS06190 eccb60fa1d505fca36ec54779cbb2005 431 PANTHER PTHR11686 44 267 3.7E-49 T 14-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AY555_RS06190 eccb60fa1d505fca36ec54779cbb2005 431 Pfam PF01019 Gamma-glutamyltranspeptidase 112 266 8.1E-27 T 14-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AY555_RS06190 eccb60fa1d505fca36ec54779cbb2005 431 Pfam PF01019 Gamma-glutamyltranspeptidase 59 109 1.2E-12 T 14-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AY555_RS06190 eccb60fa1d505fca36ec54779cbb2005 431 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 66 91 1.5E-14 T 14-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AY555_RS06190 eccb60fa1d505fca36ec54779cbb2005 431 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 231 247 1.5E-14 T 14-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AY555_RS06190 eccb60fa1d505fca36ec54779cbb2005 431 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 133 152 1.5E-14 T 14-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AY555_RS06190 eccb60fa1d505fca36ec54779cbb2005 431 SUPERFAMILY SSF56235 38 324 5.66E-57 T 14-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AY555_RS00290 43e651df809c4c13218ed25a72c5b2ee 77 SMART SM00899 1 74 2.2E-21 T 14-09-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AY555_RS00290 43e651df809c4c13218ed25a72c5b2ee 77 Pfam PF04023 FeoA domain 1 73 5.8E-17 T 14-09-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AY555_RS00290 43e651df809c4c13218ed25a72c5b2ee 77 PANTHER PTHR33238 1 77 8.8E-23 T 14-09-2016 AY555_RS00290 43e651df809c4c13218ed25a72c5b2ee 77 SUPERFAMILY SSF50037 5 75 1.63E-19 T 14-09-2016 IPR008988 Transcriptional repressor, C-terminal AY555_RS01185 f749e5e71a7c66e3ae3a30db11c2970f 211 Gene3D G3DSA:1.10.10.640 172 206 1.5E-13 T 14-09-2016 IPR023094 Toluene tolerance protein, alpha-helical AY555_RS01185 f749e5e71a7c66e3ae3a30db11c2970f 211 Gene3D G3DSA:1.10.10.640 75 114 1.5E-13 T 14-09-2016 IPR023094 Toluene tolerance protein, alpha-helical AY555_RS01185 f749e5e71a7c66e3ae3a30db11c2970f 211 PANTHER PTHR36573 4 210 4.3E-22 T 14-09-2016 AY555_RS01185 f749e5e71a7c66e3ae3a30db11c2970f 211 Gene3D G3DSA:3.10.450.50 117 171 5.7E-10 T 14-09-2016 IPR032710 NTF2-like domain AY555_RS01185 f749e5e71a7c66e3ae3a30db11c2970f 211 Gene3D G3DSA:3.10.450.50 34 73 5.7E-10 T 14-09-2016 IPR032710 NTF2-like domain AY555_RS01185 f749e5e71a7c66e3ae3a30db11c2970f 211 Pfam PF05494 MlaC protein 57 188 1.2E-37 T 14-09-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC AY555_RS06405 d0687820c5816f09f37ca19329b51f25 175 SUPERFAMILY SSF53098 1 151 1.37E-7 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AY555_RS06405 d0687820c5816f09f37ca19329b51f25 175 PANTHER PTHR36015 3 174 1.2E-28 T 14-09-2016 AY555_RS06405 d0687820c5816f09f37ca19329b51f25 175 Gene3D G3DSA:3.30.420.10 2 120 2.9E-5 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AY555_RS01175 6724b07b7b48029fabeb1db4df7aa713 323 SMART SM00418 6 85 2.6E-15 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AY555_RS01175 6724b07b7b48029fabeb1db4df7aa713 323 Gene3D G3DSA:1.10.10.10 4 77 5.7E-20 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS01175 6724b07b7b48029fabeb1db4df7aa713 323 Pfam PF08241 Methyltransferase domain 154 250 4.1E-23 T 14-09-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AY555_RS01175 6724b07b7b48029fabeb1db4df7aa713 323 Pfam PF01022 Bacterial regulatory protein, arsR family 14 58 6.1E-12 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AY555_RS01175 6724b07b7b48029fabeb1db4df7aa713 323 PANTHER PTHR10108 101 300 1.7E-27 T 14-09-2016 AY555_RS01175 6724b07b7b48029fabeb1db4df7aa713 323 SUPERFAMILY SSF53335 114 301 2.98E-36 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS01175 6724b07b7b48029fabeb1db4df7aa713 323 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 7.3E-9 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AY555_RS01175 6724b07b7b48029fabeb1db4df7aa713 323 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 7.3E-9 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AY555_RS01175 6724b07b7b48029fabeb1db4df7aa713 323 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 7.3E-9 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AY555_RS01175 6724b07b7b48029fabeb1db4df7aa713 323 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 7.3E-9 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AY555_RS01175 6724b07b7b48029fabeb1db4df7aa713 323 SUPERFAMILY SSF46785 1 115 2.64E-20 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS01175 6724b07b7b48029fabeb1db4df7aa713 323 Gene3D G3DSA:3.40.50.150 113 296 2.0E-33 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS00425 359d469bb130fe8d8563b2b0385fbe5a 560 PANTHER PTHR34220:SF3 2 550 1.4E-62 T 14-09-2016 AY555_RS00425 359d469bb130fe8d8563b2b0385fbe5a 560 SUPERFAMILY SSF55874 413 543 1.37E-12 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS00425 359d469bb130fe8d8563b2b0385fbe5a 560 PANTHER PTHR34220 2 550 1.4E-62 T 14-09-2016 AY555_RS00425 359d469bb130fe8d8563b2b0385fbe5a 560 Pfam PF06580 Histidine kinase 361 436 2.0E-20 T 14-09-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 AY555_RS00425 359d469bb130fe8d8563b2b0385fbe5a 560 Gene3D G3DSA:3.30.565.10 410 545 8.4E-11 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AY555_RS05795 f82b75d28fe8f19293740b5e893e5b7f 247 PANTHER PTHR38834:SF1 30 241 6.7E-44 T 14-09-2016 AY555_RS05795 f82b75d28fe8f19293740b5e893e5b7f 247 SMART SM00062 30 246 0.0063 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AY555_RS05795 f82b75d28fe8f19293740b5e893e5b7f 247 Gene3D G3DSA:3.40.190.10 105 178 1.1E-5 T 14-09-2016 AY555_RS05795 f82b75d28fe8f19293740b5e893e5b7f 247 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 238 3.9E-19 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AY555_RS05795 f82b75d28fe8f19293740b5e893e5b7f 247 Gene3D G3DSA:3.40.190.10 203 239 6.2E-13 T 14-09-2016 AY555_RS05795 f82b75d28fe8f19293740b5e893e5b7f 247 Gene3D G3DSA:3.40.190.10 31 104 6.2E-13 T 14-09-2016 AY555_RS05795 f82b75d28fe8f19293740b5e893e5b7f 247 PANTHER PTHR38834 30 241 6.7E-44 T 14-09-2016 AY555_RS05795 f82b75d28fe8f19293740b5e893e5b7f 247 SUPERFAMILY SSF53850 23 240 2.33E-31 T 14-09-2016 AY555_RS00215 5348303fa53a4b3fe023b1f8830256d5 130 Pfam PF07309 Flagellar protein FlaF 5 104 2.9E-27 T 14-09-2016 IPR010845 Flagellar FlaF GO:0044781 AY555_RS05160 4ced17fa74cb24dfdbb3d9dfd58d2406 166 Gene3D G3DSA:2.150.10.10 54 155 2.2E-7 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05160 4ced17fa74cb24dfdbb3d9dfd58d2406 166 SUPERFAMILY SSF51120 56 155 3.56E-8 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS03055 e41a364948332154da97dda8db94192f 294 Pfam PF03968 OstA-like protein 42 139 2.1E-5 T 14-09-2016 IPR005653 Organic solvent tolerance-like, N-terminal AY555_RS03055 e41a364948332154da97dda8db94192f 294 Pfam PF03968 OstA-like protein 154 257 2.2E-10 T 14-09-2016 IPR005653 Organic solvent tolerance-like, N-terminal AY555_RS03055 e41a364948332154da97dda8db94192f 294 Gene3D G3DSA:2.60.450.10 154 271 1.9E-21 T 14-09-2016 AY555_RS03055 e41a364948332154da97dda8db94192f 294 Gene3D G3DSA:2.60.450.10 34 153 3.4E-15 T 14-09-2016 AY555_RS06560 90ad2aed6e7d1794c01417144eb2ce70 505 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 31 481 7.6E-122 T 14-09-2016 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 AY555_RS06560 90ad2aed6e7d1794c01417144eb2ce70 505 Pfam PF05136 Phage portal protein, lambda family 34 374 8.7E-94 T 14-09-2016 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 AY555_RS07180 d7b787bb299e5a0b8ddffb8477286475 157 Pfam PF07310 PAS domain 9 142 7.2E-7 T 14-09-2016 IPR009922 Protein of unknown function DUF1457 AY555_RS00815 c8b148d5e0c5a9e24899d9e345f7fb27 227 PANTHER PTHR18901 1 209 2.8E-34 T 14-09-2016 AY555_RS00815 c8b148d5e0c5a9e24899d9e345f7fb27 227 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 189 5.7E-28 T 14-09-2016 IPR023214 HAD-like domain AY555_RS00815 c8b148d5e0c5a9e24899d9e345f7fb27 227 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 104 183 9.0E-9 T 14-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AY555_RS00815 c8b148d5e0c5a9e24899d9e345f7fb27 227 SUPERFAMILY SSF56784 3 218 2.27E-47 T 14-09-2016 IPR023214 HAD-like domain AY555_RS00815 c8b148d5e0c5a9e24899d9e345f7fb27 227 ProSitePatterns PS01228 Hypothetical cof family signature 1. 7 18 - T 14-09-2016 IPR000150 Cof protein GO:0016787 AY555_RS00815 c8b148d5e0c5a9e24899d9e345f7fb27 227 Gene3D G3DSA:3.40.50.1000 71 221 3.2E-35 T 14-09-2016 IPR023214 HAD-like domain AY555_RS03770 7838e50600f0e5cabcf79201721ed135 303 Pfam PF02195 ParB-like nuclease domain 45 134 9.2E-25 T 14-09-2016 IPR003115 ParB/Sulfiredoxin AY555_RS03770 7838e50600f0e5cabcf79201721ed135 303 SUPERFAMILY SSF110849 45 186 6.28E-33 T 14-09-2016 IPR003115 ParB/Sulfiredoxin AY555_RS03770 7838e50600f0e5cabcf79201721ed135 303 PANTHER PTHR33375 1 301 3.6E-88 T 14-09-2016 AY555_RS03770 7838e50600f0e5cabcf79201721ed135 303 SMART SM00470 43 135 1.7E-34 T 14-09-2016 IPR003115 ParB/Sulfiredoxin AY555_RS03770 7838e50600f0e5cabcf79201721ed135 303 Gene3D G3DSA:3.90.1530.10 39 140 3.9E-37 T 14-09-2016 AY555_RS03770 7838e50600f0e5cabcf79201721ed135 303 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 42 209 2.2E-59 T 14-09-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 AY555_RS08205 789c04e4f161bde6a436e8391b757e42 161 Pfam PF04355 SmpA / OmlA family 30 105 3.9E-13 T 14-09-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 AY555_RS04725 fd7fceb72803099018416c1f1ac82d14 355 Pfam PF05171 Haemin-degrading HemS.ChuX domain 213 345 1.3E-31 T 14-09-2016 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 AY555_RS04725 fd7fceb72803099018416c1f1ac82d14 355 Pfam PF05171 Haemin-degrading HemS.ChuX domain 36 162 2.8E-40 T 14-09-2016 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 AY555_RS04725 fd7fceb72803099018416c1f1ac82d14 355 Gene3D G3DSA:3.40.1570.10 8 149 3.4E-6 T 14-09-2016 AY555_RS04725 fd7fceb72803099018416c1f1ac82d14 355 Gene3D G3DSA:3.40.1570.10 203 321 6.2E-9 T 14-09-2016 AY555_RS04725 fd7fceb72803099018416c1f1ac82d14 355 SUPERFAMILY SSF144064 12 346 3.04E-116 T 14-09-2016 AY555_RS00700 74bcd619601efbd5d8c94e74d8c4d52e 268 Gene3D G3DSA:3.40.50.300 5 259 2.9E-23 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS00700 74bcd619601efbd5d8c94e74d8c4d52e 268 Pfam PF09140 ATPase MipZ 7 260 1.2E-102 T 14-09-2016 IPR015223 ATPase MipZ AY555_RS00700 74bcd619601efbd5d8c94e74d8c4d52e 268 PANTHER PTHR13696:SF54 3 259 1.8E-23 T 14-09-2016 AY555_RS00700 74bcd619601efbd5d8c94e74d8c4d52e 268 PANTHER PTHR13696 3 259 1.8E-23 T 14-09-2016 AY555_RS00700 74bcd619601efbd5d8c94e74d8c4d52e 268 SUPERFAMILY SSF52540 6 241 7.78E-26 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS01475 22628c191099af991cbf6d2bee891206 162 Gene3D G3DSA:2.60.40.790 5 152 1.5E-17 T 14-09-2016 IPR008978 HSP20-like chaperone AY555_RS01475 22628c191099af991cbf6d2bee891206 162 PANTHER PTHR11527 1 159 2.0E-43 T 14-09-2016 IPR031107 Small heat shock protein HSP20 AY555_RS01475 22628c191099af991cbf6d2bee891206 162 PANTHER PTHR11527:SF145 1 159 2.0E-43 T 14-09-2016 AY555_RS01475 22628c191099af991cbf6d2bee891206 162 Pfam PF00011 Hsp20/alpha crystallin family 45 151 5.0E-17 T 14-09-2016 IPR002068 Alpha crystallin/Hsp20 domain AY555_RS01475 22628c191099af991cbf6d2bee891206 162 SUPERFAMILY SSF49764 34 151 6.63E-21 T 14-09-2016 IPR008978 HSP20-like chaperone AY555_RS04470 79c29d3dd5fbdeac5d896426a57398cf 396 SUPERFAMILY SSF53720 76 261 9.82E-6 T 14-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AY555_RS04470 79c29d3dd5fbdeac5d896426a57398cf 396 Pfam PF05893 Acyl-CoA reductase (LuxC) 77 391 1.9E-32 T 14-09-2016 IPR008670 Acyl-CoA reductase, LuxC GO:0003995|GO:0008218|GO:0055114 KEGG: 00073+1.2.1.50|MetaCyc: PWY-7723|UniPathway: UPA00569 AY555_RS05780 ed076bd7957f7c3c073ceb4a87d9466d 236 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 232 6.7E-20 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AY555_RS05780 ed076bd7957f7c3c073ceb4a87d9466d 236 Gene3D G3DSA:3.40.190.10 197 232 9.6E-14 T 14-09-2016 AY555_RS05780 ed076bd7957f7c3c073ceb4a87d9466d 236 Gene3D G3DSA:3.40.190.10 28 97 9.6E-14 T 14-09-2016 AY555_RS05780 ed076bd7957f7c3c073ceb4a87d9466d 236 Gene3D G3DSA:3.40.190.10 98 186 3.1E-6 T 14-09-2016 AY555_RS05780 ed076bd7957f7c3c073ceb4a87d9466d 236 PANTHER PTHR38834:SF1 1 236 2.9E-43 T 14-09-2016 AY555_RS05780 ed076bd7957f7c3c073ceb4a87d9466d 236 SMART SM00062 23 235 0.0027 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AY555_RS05780 ed076bd7957f7c3c073ceb4a87d9466d 236 SUPERFAMILY SSF53850 22 232 5.97E-33 T 14-09-2016 AY555_RS05780 ed076bd7957f7c3c073ceb4a87d9466d 236 PANTHER PTHR38834 1 236 2.9E-43 T 14-09-2016 AY555_RS01520 bc1a173e9d87a9d5502676876415947c 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 286 1.8E-14 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS01520 bc1a173e9d87a9d5502676876415947c 303 SUPERFAMILY SSF161098 11 292 8.78E-58 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS01520 bc1a173e9d87a9d5502676876415947c 303 PANTHER PTHR30193:SF5 13 303 6.9E-127 T 14-09-2016 AY555_RS01520 bc1a173e9d87a9d5502676876415947c 303 Gene3D G3DSA:1.10.3720.10 10 289 4.1E-56 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS01520 bc1a173e9d87a9d5502676876415947c 303 PANTHER PTHR30193 13 303 6.9E-127 T 14-09-2016 AY555_RS08375 c320e7f620ac9c4da4fd8756eb007d4e 427 SUPERFAMILY SSF56954 2 399 7.85E-80 T 14-09-2016 AY555_RS08375 c320e7f620ac9c4da4fd8756eb007d4e 427 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 2 406 5.2E-97 T 14-09-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 AY555_RS08375 c320e7f620ac9c4da4fd8756eb007d4e 427 Pfam PF02321 Outer membrane efflux protein 3 193 2.9E-33 T 14-09-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AY555_RS08375 c320e7f620ac9c4da4fd8756eb007d4e 427 Pfam PF02321 Outer membrane efflux protein 212 397 7.2E-26 T 14-09-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AY555_RS08375 c320e7f620ac9c4da4fd8756eb007d4e 427 PANTHER PTHR30026 1 423 1.4E-93 T 14-09-2016 AY555_RS08375 c320e7f620ac9c4da4fd8756eb007d4e 427 PANTHER PTHR30026:SF3 1 423 1.4E-93 T 14-09-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 AY555_RS08375 c320e7f620ac9c4da4fd8756eb007d4e 427 Gene3D G3DSA:1.20.1600.10 2 399 7.5E-70 T 14-09-2016 AY555_RS08200 14c52b3192627f92b2b133671c176926 694 Pfam PF03030 Inorganic H+ pyrophosphatase 14 687 2.0E-256 T 14-09-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 AY555_RS08200 14c52b3192627f92b2b133671c176926 694 PANTHER PTHR31998:SF0 6 693 0.0 T 14-09-2016 AY555_RS08200 14c52b3192627f92b2b133671c176926 694 PIRSF PIRSF001265 1 694 8.4E-243 T 14-09-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 AY555_RS08200 14c52b3192627f92b2b133671c176926 694 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 2 693 24.873 T 14-09-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 AY555_RS08200 14c52b3192627f92b2b133671c176926 694 PANTHER PTHR31998 6 693 0.0 T 14-09-2016 AY555_RS08200 14c52b3192627f92b2b133671c176926 694 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 6 693 4.1E-261 T 14-09-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 AY555_RS06180 b1799e5ea23639eacab032f6c98a3b59 251 PANTHER PTHR13887:SF25 22 250 2.1E-63 T 14-09-2016 AY555_RS06180 b1799e5ea23639eacab032f6c98a3b59 251 PANTHER PTHR13887 22 250 2.1E-63 T 14-09-2016 AY555_RS06180 b1799e5ea23639eacab032f6c98a3b59 251 Gene3D G3DSA:3.40.30.10 82 249 5.6E-48 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS06180 b1799e5ea23639eacab032f6c98a3b59 251 SUPERFAMILY SSF52833 84 245 3.89E-43 T 14-09-2016 IPR012336 Thioredoxin-like fold AY555_RS06180 b1799e5ea23639eacab032f6c98a3b59 251 Pfam PF01323 DSBA-like thioredoxin domain 101 244 4.2E-25 T 14-09-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 AY555_RS02910 fc0172aeb9d2fadc329a2b7674435830 227 Gene3D G3DSA:1.10.3210.10 98 217 2.1E-20 T 14-09-2016 IPR006674 HD domain AY555_RS02910 fc0172aeb9d2fadc329a2b7674435830 227 Gene3D G3DSA:1.10.3210.10 3 66 2.1E-20 T 14-09-2016 IPR006674 HD domain AY555_RS02910 fc0172aeb9d2fadc329a2b7674435830 227 SUPERFAMILY SSF109604 3 62 7.85E-15 T 14-09-2016 AY555_RS02910 fc0172aeb9d2fadc329a2b7674435830 227 SUPERFAMILY SSF109604 94 217 7.85E-15 T 14-09-2016 AY555_RS08395 78db6671d1d2ed84900fdbe74f10ab22 79 Pfam PF12728 Helix-turn-helix domain 7 61 4.5E-7 T 14-09-2016 AY555_RS08395 78db6671d1d2ed84900fdbe74f10ab22 79 Gene3D G3DSA:1.10.10.10 7 64 8.2E-9 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS08395 78db6671d1d2ed84900fdbe74f10ab22 79 SUPERFAMILY SSF46955 6 67 1.28E-7 T 14-09-2016 IPR009061 Putative DNA-binding domain AY555_RS09225 4f381b1a3fca3da44ddff4541fec779e 66 Pfam PF02597 ThiS family 8 66 8.0E-13 T 14-09-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 AY555_RS09225 4f381b1a3fca3da44ddff4541fec779e 66 PANTHER PTHR34472 1 66 1.3E-22 T 14-09-2016 AY555_RS09225 4f381b1a3fca3da44ddff4541fec779e 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 2.2E-23 T 14-09-2016 IPR010035 ThiS, thiamine-biosynthesis AY555_RS09225 4f381b1a3fca3da44ddff4541fec779e 66 PANTHER PTHR34472:SF1 1 66 1.3E-22 T 14-09-2016 AY555_RS09225 4f381b1a3fca3da44ddff4541fec779e 66 SUPERFAMILY SSF54285 3 65 9.0E-19 T 14-09-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AY555_RS09225 4f381b1a3fca3da44ddff4541fec779e 66 Gene3D G3DSA:3.10.20.30 3 66 1.6E-26 T 14-09-2016 IPR012675 Beta-grasp domain AY555_RS09105 9c96ef97c86cf25efccc6a4f8a9d2954 341 SUPERFAMILY SSF53756 20 319 5.97E-35 T 14-09-2016 AY555_RS09105 9c96ef97c86cf25efccc6a4f8a9d2954 341 Pfam PF00534 Glycosyl transferases group 1 224 313 8.2E-14 T 14-09-2016 IPR001296 Glycosyl transferase, family 1 AY555_RS09105 9c96ef97c86cf25efccc6a4f8a9d2954 341 PANTHER PTHR12526 23 316 1.3E-23 T 14-09-2016 AY555_RS09105 9c96ef97c86cf25efccc6a4f8a9d2954 341 Gene3D G3DSA:3.40.50.2000 212 318 8.1E-13 T 14-09-2016 AY555_RS05725 9b9cff09272532c27b8f8f25abcd331d 155 SUPERFAMILY SSF102400 1 139 3.14E-34 T 14-09-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AY555_RS05725 9b9cff09272532c27b8f8f25abcd331d 155 Gene3D G3DSA:3.40.50.10110 1 139 4.0E-31 T 14-09-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AY555_RS05725 9b9cff09272532c27b8f8f25abcd331d 155 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 134 6.5E-31 T 14-09-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AY555_RS03390 5ffdefeeb9b68b3531f7970e77aee3ae 330 PANTHER PTHR24198 184 326 1.5E-29 T 14-09-2016 AY555_RS03390 5ffdefeeb9b68b3531f7970e77aee3ae 330 SMART SM00248 240 269 2.3E-5 T 14-09-2016 IPR002110 Ankyrin repeat GO:0005515 AY555_RS03390 5ffdefeeb9b68b3531f7970e77aee3ae 330 SMART SM00248 207 236 880.0 T 14-09-2016 IPR002110 Ankyrin repeat GO:0005515 AY555_RS03390 5ffdefeeb9b68b3531f7970e77aee3ae 330 SMART SM00248 273 302 0.0084 T 14-09-2016 IPR002110 Ankyrin repeat GO:0005515 AY555_RS03390 5ffdefeeb9b68b3531f7970e77aee3ae 330 Gene3D G3DSA:1.25.40.20 200 327 1.7E-32 T 14-09-2016 IPR020683 Ankyrin repeat-containing domain AY555_RS03390 5ffdefeeb9b68b3531f7970e77aee3ae 330 SUPERFAMILY SSF48403 198 327 3.26E-30 T 14-09-2016 IPR020683 Ankyrin repeat-containing domain AY555_RS03390 5ffdefeeb9b68b3531f7970e77aee3ae 330 Pfam PF13857 Ankyrin repeats (many copies) 260 314 1.7E-13 T 14-09-2016 AY555_RS02240 f476c43844649f3c953dc9c7370b5afd 234 SUPERFAMILY SSF53850 7 213 4.56E-23 T 14-09-2016 AY555_RS02240 f476c43844649f3c953dc9c7370b5afd 234 SMART SM00062 15 217 2.7E-7 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AY555_RS02240 f476c43844649f3c953dc9c7370b5afd 234 Gene3D G3DSA:3.40.190.10 109 171 2.1E-5 T 14-09-2016 AY555_RS02240 f476c43844649f3c953dc9c7370b5afd 234 Gene3D G3DSA:3.40.190.10 3 108 3.8E-7 T 14-09-2016 AY555_RS02240 f476c43844649f3c953dc9c7370b5afd 234 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 211 1.1E-15 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AY555_RS09530 b7ab756e2fdd1173dac1a989913e05df 123 Pfam PF13629 Pilus formation protein N terminal region 49 116 2.5E-6 T 14-09-2016 IPR032789 Pilus formation protein, N-terminal AY555_RS07750 b70c483ced816fd16cc98229679c7502 441 PANTHER PTHR36106:SF3 3 441 8.4E-235 T 14-09-2016 AY555_RS07750 b70c483ced816fd16cc98229679c7502 441 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 7 440 1.1E-142 T 14-09-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AY555_RS07750 b70c483ced816fd16cc98229679c7502 441 PANTHER PTHR36106 3 441 8.4E-235 T 14-09-2016 AY555_RS07750 b70c483ced816fd16cc98229679c7502 441 PIRSF PIRSF004539 2 441 1.3E-159 T 14-09-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AY555_RS07750 b70c483ced816fd16cc98229679c7502 441 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 7 372 2.7E-135 T 14-09-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AY555_RS00430 7872b6c01fb557be4036bc03991a5f0d 322 Pfam PF04392 ABC transporter substrate binding protein 63 315 1.4E-30 T 14-09-2016 IPR007487 ABC transporter, substrate-binding protein AY555_RS00430 7872b6c01fb557be4036bc03991a5f0d 322 PANTHER PTHR35271 1 302 3.3E-28 T 14-09-2016 AY555_RS00430 7872b6c01fb557be4036bc03991a5f0d 322 Gene3D G3DSA:3.40.50.2300 38 158 1.1E-21 T 14-09-2016 AY555_RS00430 7872b6c01fb557be4036bc03991a5f0d 322 Gene3D G3DSA:3.40.50.2300 159 293 1.2E-20 T 14-09-2016 AY555_RS03720 0df36005f2f971eef301b26d0dd063de 157 PANTHER PTHR35335:SF1 1 113 1.7E-15 T 14-09-2016 AY555_RS03720 0df36005f2f971eef301b26d0dd063de 157 PANTHER PTHR35335 1 113 1.7E-15 T 14-09-2016 AY555_RS03720 0df36005f2f971eef301b26d0dd063de 157 Pfam PF04186 FxsA cytoplasmic membrane protein 7 112 3.0E-22 T 14-09-2016 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 AY555_RS06845 ac4ba6643f33778ce5a79d1b56f26ebb 376 PANTHER PTHR30454 9 364 4.4E-179 T 14-09-2016 AY555_RS06845 ac4ba6643f33778ce5a79d1b56f26ebb 376 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 9 359 33.094 T 14-09-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 AY555_RS06845 ac4ba6643f33778ce5a79d1b56f26ebb 376 SUPERFAMILY SSF51717 37 210 1.18E-9 T 14-09-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 AY555_RS06845 ac4ba6643f33778ce5a79d1b56f26ebb 376 SUPERFAMILY SSF56014 269 352 6.54E-13 T 14-09-2016 AY555_RS06845 ac4ba6643f33778ce5a79d1b56f26ebb 376 PIRSF PIRSF004640 3 365 9.3E-147 T 14-09-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 AY555_RS06845 ac4ba6643f33778ce5a79d1b56f26ebb 376 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 11 355 4.7E-135 T 14-09-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 AY555_RS06845 ac4ba6643f33778ce5a79d1b56f26ebb 376 Pfam PF04551 GcpE protein 15 356 2.7E-130 T 14-09-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 AY555_RS06845 ac4ba6643f33778ce5a79d1b56f26ebb 376 Gene3D G3DSA:3.20.20.70 9 132 2.2E-7 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AY555_RS03165 21dfcce8d134ec766c99bf7cea962dd7 308 Pfam PF00551 Formyl transferase 1 179 2.7E-41 T 14-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AY555_RS03165 21dfcce8d134ec766c99bf7cea962dd7 308 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 131 154 - T 14-09-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AY555_RS03165 21dfcce8d134ec766c99bf7cea962dd7 308 SUPERFAMILY SSF50486 203 302 2.83E-27 T 14-09-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 AY555_RS03165 21dfcce8d134ec766c99bf7cea962dd7 308 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 297 34.454 T 14-09-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AY555_RS03165 21dfcce8d134ec766c99bf7cea962dd7 308 PANTHER PTHR11138 1 294 9.4E-106 T 14-09-2016 AY555_RS03165 21dfcce8d134ec766c99bf7cea962dd7 308 Gene3D G3DSA:3.10.25.10 205 303 8.0E-28 T 14-09-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AY555_RS03165 21dfcce8d134ec766c99bf7cea962dd7 308 Pfam PF02911 Formyl transferase, C-terminal domain 202 294 7.2E-23 T 14-09-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AY555_RS03165 21dfcce8d134ec766c99bf7cea962dd7 308 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 293 1.4E-84 T 14-09-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AY555_RS03165 21dfcce8d134ec766c99bf7cea962dd7 308 SUPERFAMILY SSF53328 1 205 3.92E-65 T 14-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AY555_RS03165 21dfcce8d134ec766c99bf7cea962dd7 308 Gene3D G3DSA:3.40.50.170 1 203 1.5E-70 T 14-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AY555_RS05355 1f16446a8c17cfcc22f9b740b6246003 185 Pfam PF11233 Protein of unknown function (DUF3035) 19 166 2.2E-43 T 14-09-2016 IPR021395 Protein of unknown function DUF3035 AY555_RS04315 b3f848662fe820ed40ae7c241063a18f 238 SUPERFAMILY SSF52540 25 208 4.37E-38 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04315 b3f848662fe820ed40ae7c241063a18f 238 SMART SM00382 46 235 3.6E-8 T 14-09-2016 IPR003593 AAA+ ATPase domain AY555_RS04315 b3f848662fe820ed40ae7c241063a18f 238 PANTHER PTHR24220:SF508 23 212 2.1E-62 T 14-09-2016 AY555_RS04315 b3f848662fe820ed40ae7c241063a18f 238 Gene3D G3DSA:3.40.50.300 20 208 9.3E-36 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS04315 b3f848662fe820ed40ae7c241063a18f 238 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 25 219 2.4E-60 T 14-09-2016 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 AY555_RS04315 b3f848662fe820ed40ae7c241063a18f 238 Pfam PF00005 ABC transporter 38 177 1.5E-19 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AY555_RS04315 b3f848662fe820ed40ae7c241063a18f 238 PANTHER PTHR24220 23 212 2.1E-62 T 14-09-2016 AY555_RS05820 f743596dd11c6b6e8fb631640af8d9f0 245 PANTHER PTHR36926:SF1 6 164 2.9E-22 T 14-09-2016 AY555_RS05820 f743596dd11c6b6e8fb631640af8d9f0 245 Pfam PF02674 Colicin V production protein 10 152 3.8E-27 T 14-09-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 AY555_RS05820 f743596dd11c6b6e8fb631640af8d9f0 245 PANTHER PTHR36926 6 164 2.9E-22 T 14-09-2016 AY555_RS02950 208104869deb598f064934afc5e61f96 430 Pfam PF00589 Phage integrase family 273 405 7.6E-12 T 14-09-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AY555_RS02950 208104869deb598f064934afc5e61f96 430 SUPERFAMILY SSF56349 160 405 3.06E-26 T 14-09-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AY555_RS02950 208104869deb598f064934afc5e61f96 430 Gene3D G3DSA:1.10.443.10 271 405 3.1E-16 T 14-09-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AY555_RS07640 b6af03e211e255a6750f5f80ce42b059 266 PANTHER PTHR30622 1 262 2.4E-101 T 14-09-2016 AY555_RS07640 b6af03e211e255a6750f5f80ce42b059 266 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 2 262 16.724 T 14-09-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AY555_RS07640 b6af03e211e255a6750f5f80ce42b059 266 Pfam PF02673 Bacitracin resistance protein BacA 7 256 4.1E-73 T 14-09-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AY555_RS07640 b6af03e211e255a6750f5f80ce42b059 266 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 7 255 3.9E-67 T 14-09-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AY555_RS07640 b6af03e211e255a6750f5f80ce42b059 266 PANTHER PTHR30622:SF3 1 262 2.4E-101 T 14-09-2016 AY555_RS06810 9be1712e476671c324daf145823514c4 163 Pfam PF06676 Protein of unknown function (DUF1178) 1 159 4.9E-46 T 14-09-2016 IPR009562 Protein of unknown function DUF1178 AY555_RS06810 9be1712e476671c324daf145823514c4 163 PIRSF PIRSF032131 1 163 3.1E-39 T 14-09-2016 IPR009562 Protein of unknown function DUF1178 AY555_RS05790 9f5025270f0a6ba43cc804bc4adb6289 236 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 233 1.4E-21 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AY555_RS05790 9f5025270f0a6ba43cc804bc4adb6289 236 Gene3D G3DSA:3.40.190.10 29 130 1.0E-15 T 14-09-2016 AY555_RS05790 9f5025270f0a6ba43cc804bc4adb6289 236 Gene3D G3DSA:3.40.190.10 131 183 4.8E-5 T 14-09-2016 AY555_RS05790 9f5025270f0a6ba43cc804bc4adb6289 236 PANTHER PTHR38834 25 235 2.9E-53 T 14-09-2016 AY555_RS05790 9f5025270f0a6ba43cc804bc4adb6289 236 SMART SM00062 24 235 0.0019 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AY555_RS05790 9f5025270f0a6ba43cc804bc4adb6289 236 PANTHER PTHR38834:SF1 25 235 2.9E-53 T 14-09-2016 AY555_RS05790 9f5025270f0a6ba43cc804bc4adb6289 236 SUPERFAMILY SSF53850 22 233 3.98E-34 T 14-09-2016 AY555_RS06515 5420ac9a10c1ae1a2296cab9e6479298 209 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 6 119 2.1E-37 T 14-09-2016 IPR006521 Tail protein I AY555_RS06515 5420ac9a10c1ae1a2296cab9e6479298 209 Pfam PF09684 Phage tail protein (Tail_P2_I) 6 143 1.8E-43 T 14-09-2016 IPR006521 Tail protein I AY555_RS06770 bb6f1c011f16784317e0c09a7374e04a 285 Pfam PF08904 Domain of unknown function (DUF1849) 38 276 9.2E-58 T 14-09-2016 IPR015000 Protein of unknown function DUF1849 AY555_RS09195 8831b30ef02a9401d7e0ca677190c239 670 Gene3D G3DSA:1.10.510.10 122 302 1.7E-8 T 14-09-2016 AY555_RS09195 8831b30ef02a9401d7e0ca677190c239 670 SUPERFAMILY SSF56112 65 305 1.23E-11 T 14-09-2016 IPR011009 Protein kinase-like domain AY555_RS03575 34ede1dce1eb4d818ccf23e164780e45 549 PANTHER PTHR33908:SF3 14 442 3.5E-60 T 14-09-2016 AY555_RS03575 34ede1dce1eb4d818ccf23e164780e45 549 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 64 233 6.6E-12 T 14-09-2016 AY555_RS03575 34ede1dce1eb4d818ccf23e164780e45 549 PANTHER PTHR33908 14 442 3.5E-60 T 14-09-2016 AY555_RS06965 b510086df1fc4890a4e2f99c84856b00 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 14-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AY555_RS06965 b510086df1fc4890a4e2f99c84856b00 251 SUPERFAMILY SSF51735 5 248 3.64E-73 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS06965 b510086df1fc4890a4e2f99c84856b00 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 3.9E-12 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS06965 b510086df1fc4890a4e2f99c84856b00 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 3.9E-12 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS06965 b510086df1fc4890a4e2f99c84856b00 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 3.9E-12 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS06965 b510086df1fc4890a4e2f99c84856b00 251 PANTHER PTHR24322 155 187 2.6E-47 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS06965 b510086df1fc4890a4e2f99c84856b00 251 PANTHER PTHR24322 15 139 2.6E-47 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS06965 b510086df1fc4890a4e2f99c84856b00 251 Gene3D G3DSA:3.40.50.720 5 248 5.4E-78 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS06965 b510086df1fc4890a4e2f99c84856b00 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 5.6E-41 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS06965 b510086df1fc4890a4e2f99c84856b00 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 5.6E-41 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS06965 b510086df1fc4890a4e2f99c84856b00 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 5.6E-41 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS06965 b510086df1fc4890a4e2f99c84856b00 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 5.6E-41 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS06965 b510086df1fc4890a4e2f99c84856b00 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 5.6E-41 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS06965 b510086df1fc4890a4e2f99c84856b00 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 5.6E-41 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AY555_RS06965 b510086df1fc4890a4e2f99c84856b00 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 247 5.2E-56 T 14-09-2016 AY555_RS01755 83a2b11a395167fe39d83afd70475483 346 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 101 343 1.8E-98 T 14-09-2016 IPR019591 Mrp/NBP35 ATP-binding protein AY555_RS01755 83a2b11a395167fe39d83afd70475483 346 SUPERFAMILY SSF117916 4 87 1.9E-12 T 14-09-2016 AY555_RS01755 83a2b11a395167fe39d83afd70475483 346 Pfam PF01883 Domain of unknown function DUF59 7 76 1.3E-10 T 14-09-2016 IPR002744 Domain of unknown function DUF59 AY555_RS01755 83a2b11a395167fe39d83afd70475483 346 SUPERFAMILY SSF52540 102 344 1.96E-54 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS01755 83a2b11a395167fe39d83afd70475483 346 Hamap MF_02040 Iron-sulfur cluster carrier protein. 96 344 36.081 T 14-09-2016 IPR019591 Mrp/NBP35 ATP-binding protein AY555_RS01755 83a2b11a395167fe39d83afd70475483 346 Gene3D G3DSA:3.40.50.300 97 343 1.5E-102 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS01755 83a2b11a395167fe39d83afd70475483 346 PANTHER PTHR23264 1 344 7.9E-143 T 14-09-2016 IPR019591 Mrp/NBP35 ATP-binding protein AY555_RS02310 cd89107b2646cc6aa250fc845fa743e1 254 PANTHER PTHR30473 51 248 1.7E-100 T 14-09-2016 AY555_RS02310 cd89107b2646cc6aa250fc845fa743e1 254 SUPERFAMILY SSF52540 52 234 4.86E-34 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS02310 cd89107b2646cc6aa250fc845fa743e1 254 Pfam PF02562 PhoH-like protein 53 252 2.4E-79 T 14-09-2016 IPR003714 PhoH-like protein GO:0005524 AY555_RS02310 cd89107b2646cc6aa250fc845fa743e1 254 PANTHER PTHR30473:SF1 51 248 1.7E-100 T 14-09-2016 AY555_RS02310 cd89107b2646cc6aa250fc845fa743e1 254 Gene3D G3DSA:3.40.50.300 52 251 1.0E-72 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS02260 567fa4fe35d563c13a1affd1a6bc163d 107 SUPERFAMILY SSF82607 8 101 3.79E-32 T 14-09-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family AY555_RS02260 567fa4fe35d563c13a1affd1a6bc163d 107 PANTHER PTHR33449:SF1 1 107 1.9E-44 T 14-09-2016 AY555_RS02260 567fa4fe35d563c13a1affd1a6bc163d 107 Pfam PF02575 YbaB/EbfC DNA-binding family 8 98 8.7E-33 T 14-09-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family AY555_RS02260 567fa4fe35d563c13a1affd1a6bc163d 107 PIRSF PIRSF004555 1 107 2.0E-36 T 14-09-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family AY555_RS02260 567fa4fe35d563c13a1affd1a6bc163d 107 PANTHER PTHR33449 1 107 1.9E-44 T 14-09-2016 AY555_RS02260 567fa4fe35d563c13a1affd1a6bc163d 107 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 2 96 21.64 T 14-09-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family AY555_RS02260 567fa4fe35d563c13a1affd1a6bc163d 107 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 103 1.1E-28 T 14-09-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family AY555_RS02260 567fa4fe35d563c13a1affd1a6bc163d 107 Gene3D G3DSA:3.30.1310.10 1 107 2.6E-41 T 14-09-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family AY555_RS03080 4ffea40c2776fee7fbc76c31f63ccc20 339 PANTHER PTHR12126 4 334 9.4E-88 T 14-09-2016 AY555_RS03080 4ffea40c2776fee7fbc76c31f63ccc20 339 Pfam PF13460 NAD(P)H-binding 10 131 1.2E-16 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS03080 4ffea40c2776fee7fbc76c31f63ccc20 339 Gene3D G3DSA:3.40.50.720 2 250 1.4E-50 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS03080 4ffea40c2776fee7fbc76c31f63ccc20 339 SUPERFAMILY SSF51735 1 301 4.84E-51 T 14-09-2016 IPR016040 NAD(P)-binding domain AY555_RS01725 47e870c63f30fd13e96d648d1ec7c757 288 PANTHER PTHR13622:SF8 39 288 1.6E-57 T 14-09-2016 AY555_RS01725 47e870c63f30fd13e96d648d1ec7c757 288 Gene3D G3DSA:3.90.79.10 85 264 7.2E-41 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AY555_RS01725 47e870c63f30fd13e96d648d1ec7c757 288 SUPERFAMILY SSF55811 92 259 1.15E-13 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AY555_RS01725 47e870c63f30fd13e96d648d1ec7c757 288 Pfam PF15916 Domain of unknown function (DUF4743) 4 114 2.3E-24 T 14-09-2016 IPR031804 Domain of unknown function DUF4743 AY555_RS01725 47e870c63f30fd13e96d648d1ec7c757 288 PANTHER PTHR13622 39 288 1.6E-57 T 14-09-2016 AY555_RS07385 14af90e8c7b689c31e6cb22ef7af5c8a 204 PANTHER PTHR30055 2 111 4.0E-23 T 14-09-2016 AY555_RS07385 14af90e8c7b689c31e6cb22ef7af5c8a 204 SUPERFAMILY SSF48498 91 195 6.56E-5 T 14-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AY555_RS07385 14af90e8c7b689c31e6cb22ef7af5c8a 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 2.8E-7 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AY555_RS07385 14af90e8c7b689c31e6cb22ef7af5c8a 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 2.8E-7 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AY555_RS07385 14af90e8c7b689c31e6cb22ef7af5c8a 204 PANTHER PTHR30055:SF47 2 111 4.0E-23 T 14-09-2016 AY555_RS07385 14af90e8c7b689c31e6cb22ef7af5c8a 204 Gene3D G3DSA:1.10.357.10 14 171 1.9E-27 T 14-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AY555_RS07385 14af90e8c7b689c31e6cb22ef7af5c8a 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 68 4.9E-14 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AY555_RS07385 14af90e8c7b689c31e6cb22ef7af5c8a 204 SUPERFAMILY SSF46689 12 82 1.15E-17 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AY555_RS02865 79e41e684b54bd352044f8113106d556 354 Gene3D G3DSA:3.90.580.10 4 97 5.2E-27 T 14-09-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AY555_RS02865 79e41e684b54bd352044f8113106d556 354 Pfam PF01807 CHC2 zinc finger 8 97 1.4E-26 T 14-09-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AY555_RS02865 79e41e684b54bd352044f8113106d556 354 PANTHER PTHR30313 3 158 5.1E-33 T 14-09-2016 AY555_RS02865 79e41e684b54bd352044f8113106d556 354 SMART SM00400 36 89 6.2E-23 T 14-09-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AY555_RS02865 79e41e684b54bd352044f8113106d556 354 SUPERFAMILY SSF57783 4 97 1.5E-26 T 14-09-2016 AY555_RS04430 05a126c1f866137a4aaf92dd7f864a8f 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 257 8.5E-88 T 14-09-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AY555_RS04430 05a126c1f866137a4aaf92dd7f864a8f 258 Gene3D G3DSA:3.90.226.10 1 256 1.2E-99 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AY555_RS04430 05a126c1f866137a4aaf92dd7f864a8f 258 PANTHER PTHR11941:SF54 1 255 2.0E-122 T 14-09-2016 AY555_RS04430 05a126c1f866137a4aaf92dd7f864a8f 258 PANTHER PTHR11941 1 255 2.0E-122 T 14-09-2016 AY555_RS04430 05a126c1f866137a4aaf92dd7f864a8f 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 14-09-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AY555_RS04430 05a126c1f866137a4aaf92dd7f864a8f 258 SUPERFAMILY SSF52096 1 258 5.83E-90 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AY555_RS03360 aac95647a2969ba38fb50f8931622d44 257 Gene3D G3DSA:3.40.50.1000 124 233 4.1E-11 T 14-09-2016 IPR023214 HAD-like domain AY555_RS03360 aac95647a2969ba38fb50f8931622d44 257 Gene3D G3DSA:3.40.50.1000 19 37 4.1E-11 T 14-09-2016 IPR023214 HAD-like domain AY555_RS03360 aac95647a2969ba38fb50f8931622d44 257 SUPERFAMILY SSF56784 20 237 6.06E-12 T 14-09-2016 IPR023214 HAD-like domain AY555_RS04450 9372c15f8408729f53c72343ad0aecfb 314 SUPERFAMILY SSF51120 87 273 1.07E-24 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS04450 9372c15f8408729f53c72343ad0aecfb 314 SUPERFAMILY SSF51120 22 121 9.77E-11 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS04450 9372c15f8408729f53c72343ad0aecfb 314 Gene3D G3DSA:2.150.10.10 24 244 1.5E-25 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS04450 9372c15f8408729f53c72343ad0aecfb 314 Pfam PF08548 Peptidase M10 serralysin C terminal 179 254 4.1E-7 T 14-09-2016 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 AY555_RS04450 9372c15f8408729f53c72343ad0aecfb 314 PRINTS PR00313 NodO calcium binding signature 107 115 1.8E-8 T 14-09-2016 AY555_RS04450 9372c15f8408729f53c72343ad0aecfb 314 PRINTS PR00313 NodO calcium binding signature 86 97 1.8E-8 T 14-09-2016 AY555_RS04450 9372c15f8408729f53c72343ad0aecfb 314 PRINTS PR00313 NodO calcium binding signature 180 188 1.8E-8 T 14-09-2016 AY555_RS04450 9372c15f8408729f53c72343ad0aecfb 314 PRINTS PR00313 NodO calcium binding signature 198 207 1.8E-8 T 14-09-2016 AY555_RS04450 9372c15f8408729f53c72343ad0aecfb 314 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 185 203 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05170 445fef5a1fa7264ad59a60e321aa56a1 718 Gene3D G3DSA:2.150.10.10 301 356 1.6E-27 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05170 445fef5a1fa7264ad59a60e321aa56a1 718 Gene3D G3DSA:2.150.10.10 576 661 5.6E-15 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05170 445fef5a1fa7264ad59a60e321aa56a1 718 Gene3D G3DSA:2.150.10.10 230 267 1.6E-27 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05170 445fef5a1fa7264ad59a60e321aa56a1 718 Gene3D G3DSA:2.150.10.10 394 469 1.6E-27 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05170 445fef5a1fa7264ad59a60e321aa56a1 718 SUPERFAMILY SSF51120 349 471 2.09E-12 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05170 445fef5a1fa7264ad59a60e321aa56a1 718 SUPERFAMILY SSF51120 546 716 5.76E-19 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05170 445fef5a1fa7264ad59a60e321aa56a1 718 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 249 264 1.7 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05170 445fef5a1fa7264ad59a60e321aa56a1 718 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 341 355 0.024 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05170 445fef5a1fa7264ad59a60e321aa56a1 718 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 414 429 16.0 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05170 445fef5a1fa7264ad59a60e321aa56a1 718 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 599 615 0.61 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05170 445fef5a1fa7264ad59a60e321aa56a1 718 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 396 410 1.6 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05170 445fef5a1fa7264ad59a60e321aa56a1 718 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 581 597 2.5 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05170 445fef5a1fa7264ad59a60e321aa56a1 718 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 322 339 0.93 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AY555_RS05170 445fef5a1fa7264ad59a60e321aa56a1 718 SUPERFAMILY SSF51120 228 363 1.94E-17 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AY555_RS05170 445fef5a1fa7264ad59a60e321aa56a1 718 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 328 346 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05170 445fef5a1fa7264ad59a60e321aa56a1 718 PRINTS PR00313 NodO calcium binding signature 183 194 1.7E-9 T 14-09-2016 AY555_RS05170 445fef5a1fa7264ad59a60e321aa56a1 718 PRINTS PR00313 NodO calcium binding signature 617 626 1.7E-9 T 14-09-2016 AY555_RS05170 445fef5a1fa7264ad59a60e321aa56a1 718 PRINTS PR00313 NodO calcium binding signature 608 616 1.7E-9 T 14-09-2016 AY555_RS05170 445fef5a1fa7264ad59a60e321aa56a1 718 PRINTS PR00313 NodO calcium binding signature 396 404 1.7E-9 T 14-09-2016 AY555_RS05170 445fef5a1fa7264ad59a60e321aa56a1 718 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 604 622 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS05170 445fef5a1fa7264ad59a60e321aa56a1 718 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 337 355 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AY555_RS09265 eb153adcfe744e497e28826a726e24f6 116 PANTHER PTHR12910 13 95 4.4E-26 T 14-09-2016 IPR007763 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 GO:0008137|GO:0009055|GO:0016020 AY555_RS09265 eb153adcfe744e497e28826a726e24f6 116 PANTHER PTHR12910:SF2 13 95 4.4E-26 T 14-09-2016 AY555_RS09265 eb153adcfe744e497e28826a726e24f6 116 Pfam PF05071 NADH ubiquinone oxidoreductase subunit NDUFA12 13 115 3.4E-25 T 14-09-2016 IPR007763 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 GO:0008137|GO:0009055|GO:0016020 AY555_RS09705 96b965e5d2404bb647093b70c01662c9 342 SUPERFAMILY SSF53756 17 331 6.91E-22 T 14-09-2016 AY555_RS09705 96b965e5d2404bb647093b70c01662c9 342 Pfam PF13692 Glycosyl transferases group 1 166 306 3.6E-9 T 14-09-2016 AY555_RS09705 96b965e5d2404bb647093b70c01662c9 342 Gene3D G3DSA:3.40.50.2000 166 303 4.6E-4 T 14-09-2016 AY555_RS06155 cb55601754e48f4faf69a2015adbcb86 131 ProDom PD201674 DIVISION CELL RP568 MEMBRANE TRANSMEMBRANE FTSL 11 84 6.0E-4 T 14-09-2016 AY555_RS04145 62013d735b8ff6a2c929e73752a830e8 997 Pfam PF12705 PD-(D/E)XK nuclease superfamily 724 929 1.4E-24 T 14-09-2016 AY555_RS04145 62013d735b8ff6a2c929e73752a830e8 997 TIGRFAM TIGR02786 addB_alphas: double-strand break repair protein AddB 14 986 6.4E-299 T 14-09-2016 IPR014153 Double-strand break repair protein AddB AY555_RS04145 62013d735b8ff6a2c929e73752a830e8 997 SUPERFAMILY SSF52540 334 682 2.12E-27 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS01010 ceca6f8dbe812716541d69f030d55c36 172 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 158 25.726 T 14-09-2016 IPR022973 Ribosomal protein L10 AY555_RS01010 ceca6f8dbe812716541d69f030d55c36 172 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 2 164 1.0E-6 T 14-09-2016 AY555_RS01010 ceca6f8dbe812716541d69f030d55c36 172 ProSitePatterns PS01109 Ribosomal protein L10 signature. 6 40 - T 14-09-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AY555_RS01010 ceca6f8dbe812716541d69f030d55c36 172 PANTHER PTHR11560 1 170 1.0E-53 T 14-09-2016 AY555_RS01010 ceca6f8dbe812716541d69f030d55c36 172 Pfam PF00466 Ribosomal protein L10 2 98 1.8E-25 T 14-09-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 AY555_RS01010 ceca6f8dbe812716541d69f030d55c36 172 SUPERFAMILY SSF160369 2 168 8.5E-57 T 14-09-2016 AY555_RS06555 6abe0b4925c84af8e4f4efe2350df965 620 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 330 617 3.8E-32 T 14-09-2016 IPR006444 Phage major capsid protein, HK97 AY555_RS06555 6abe0b4925c84af8e4f4efe2350df965 620 Pfam PF05065 Phage capsid family 355 619 4.6E-43 T 14-09-2016 IPR024455 Phage capsid AY555_RS06555 6abe0b4925c84af8e4f4efe2350df965 620 SUPERFAMILY SSF56563 353 619 4.71E-40 T 14-09-2016 AY555_RS06555 6abe0b4925c84af8e4f4efe2350df965 620 Pfam PF04586 Caudovirus prohead serine protease 42 168 1.7E-9 T 14-09-2016 IPR006433 Prohead protease AY555_RS06235 3354fcd68a3a056b3ea44aa44b619689 825 Gene3D G3DSA:1.10.3810.10 57 235 3.3E-66 T 14-09-2016 AY555_RS06235 3354fcd68a3a056b3ea44aa44b619689 825 Pfam PF00905 Penicillin binding protein transpeptidase domain 421 714 1.4E-35 T 14-09-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AY555_RS06235 3354fcd68a3a056b3ea44aa44b619689 825 SUPERFAMILY SSF56601 267 319 1.0E-128 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AY555_RS06235 3354fcd68a3a056b3ea44aa44b619689 825 SUPERFAMILY SSF56601 416 764 1.0E-128 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AY555_RS06235 3354fcd68a3a056b3ea44aa44b619689 825 SUPERFAMILY SSF56601 215 237 1.0E-128 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AY555_RS06235 3354fcd68a3a056b3ea44aa44b619689 825 Pfam PF17092 Penicillin-binding protein OB-like domain 322 419 1.1E-15 T 14-09-2016 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00230+2.4.2.-|KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00514+2.4.2.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00219 AY555_RS06235 3354fcd68a3a056b3ea44aa44b619689 825 Pfam PF00912 Transglycosylase 56 233 7.2E-59 T 14-09-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 AY555_RS06235 3354fcd68a3a056b3ea44aa44b619689 825 SUPERFAMILY SSF53955 43 255 7.87E-70 T 14-09-2016 IPR023346 Lysozyme-like domain AY555_RS06235 3354fcd68a3a056b3ea44aa44b619689 825 Gene3D G3DSA:3.40.710.10 236 319 3.8E-134 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AY555_RS06235 3354fcd68a3a056b3ea44aa44b619689 825 Gene3D G3DSA:3.40.710.10 416 762 3.8E-134 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AY555_RS06235 3354fcd68a3a056b3ea44aa44b619689 825 PANTHER PTHR32282:SF5 415 605 1.2E-237 T 14-09-2016 AY555_RS06235 3354fcd68a3a056b3ea44aa44b619689 825 PANTHER PTHR32282:SF5 625 823 1.2E-237 T 14-09-2016 AY555_RS06235 3354fcd68a3a056b3ea44aa44b619689 825 PANTHER PTHR32282:SF5 1 316 1.2E-237 T 14-09-2016 AY555_RS06235 3354fcd68a3a056b3ea44aa44b619689 825 Gene3D G3DSA:2.40.50.140 355 415 8.0E-6 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AY555_RS06235 3354fcd68a3a056b3ea44aa44b619689 825 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 66 718 1.3E-181 T 14-09-2016 AY555_RS06235 3354fcd68a3a056b3ea44aa44b619689 825 PANTHER PTHR32282 415 605 1.2E-237 T 14-09-2016 AY555_RS06235 3354fcd68a3a056b3ea44aa44b619689 825 PANTHER PTHR32282 625 823 1.2E-237 T 14-09-2016 AY555_RS06235 3354fcd68a3a056b3ea44aa44b619689 825 PANTHER PTHR32282 1 316 1.2E-237 T 14-09-2016 AY555_RS02140 0bf426c4dd5cca0abf0546def692295f 194 SMART SM00421 129 186 0.0072 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AY555_RS02140 0bf426c4dd5cca0abf0546def692295f 194 Pfam PF03472 Autoinducer binding domain 14 111 5.6E-15 T 14-09-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AY555_RS02140 0bf426c4dd5cca0abf0546def692295f 194 Gene3D G3DSA:3.30.450.80 16 126 3.4E-16 T 14-09-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AY555_RS02140 0bf426c4dd5cca0abf0546def692295f 194 SUPERFAMILY SSF75516 13 122 2.09E-18 T 14-09-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AY555_RS02140 0bf426c4dd5cca0abf0546def692295f 194 SUPERFAMILY SSF46894 120 192 3.13E-9 T 14-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AY555_RS02140 0bf426c4dd5cca0abf0546def692295f 194 Gene3D G3DSA:1.10.10.10 127 192 8.8E-9 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AY555_RS02140 0bf426c4dd5cca0abf0546def692295f 194 Pfam PF00196 Bacterial regulatory proteins, luxR family 132 182 3.1E-5 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AY555_RS00100 d269fb343874432d2e30b1e6ca74aea5 1174 Gene3D G3DSA:1.25.40.10 685 740 8.0E-9 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS00100 d269fb343874432d2e30b1e6ca74aea5 1174 Gene3D G3DSA:1.25.40.10 865 898 8.0E-9 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS00100 d269fb343874432d2e30b1e6ca74aea5 1174 Gene3D G3DSA:1.25.40.10 984 1041 8.0E-9 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS00100 d269fb343874432d2e30b1e6ca74aea5 1174 Gene3D G3DSA:1.25.40.10 773 823 8.0E-9 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS00100 d269fb343874432d2e30b1e6ca74aea5 1174 SUPERFAMILY SSF48452 647 747 6.83E-7 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS00100 d269fb343874432d2e30b1e6ca74aea5 1174 SUPERFAMILY SSF48452 787 896 6.83E-7 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS09610 504b058c9e47eefa4512d9cc82658442 210 Pfam PF10090 Histidine phosphotransferase 23 203 1.1E-31 T 14-09-2016 IPR018762 Histidine phosphotransferase AY555_RS06355 c836505d5f3f13caef0a7db1884f21d9 425 Pfam PF09375 Imelysin 41 395 3.7E-86 T 14-09-2016 AY555_RS06280 d2da556e9e1143b273308a8dfbbb4554 214 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 40 138 1.5E-9 T 14-09-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 AY555_RS06280 d2da556e9e1143b273308a8dfbbb4554 214 Gene3D G3DSA:3.40.50.1820 3 209 5.0E-62 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AY555_RS06280 d2da556e9e1143b273308a8dfbbb4554 214 PANTHER PTHR12277:SF79 27 207 9.1E-52 T 14-09-2016 AY555_RS06280 d2da556e9e1143b273308a8dfbbb4554 214 PANTHER PTHR12277 27 207 9.1E-52 T 14-09-2016 AY555_RS06280 d2da556e9e1143b273308a8dfbbb4554 214 SUPERFAMILY SSF53474 4 209 3.44E-52 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AY555_RS02975 cdfdac0dc23bcecc6dca8ccd86a3355e 250 Gene3D G3DSA:3.40.190.10 30 108 5.6E-11 T 14-09-2016 AY555_RS02975 cdfdac0dc23bcecc6dca8ccd86a3355e 250 Gene3D G3DSA:3.40.190.10 204 245 5.6E-11 T 14-09-2016 AY555_RS02975 cdfdac0dc23bcecc6dca8ccd86a3355e 250 PANTHER PTHR35936:SF3 11 247 5.7E-27 T 14-09-2016 AY555_RS02975 cdfdac0dc23bcecc6dca8ccd86a3355e 250 PANTHER PTHR35936 11 247 5.7E-27 T 14-09-2016 AY555_RS02975 cdfdac0dc23bcecc6dca8ccd86a3355e 250 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 244 3.6E-19 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AY555_RS02975 cdfdac0dc23bcecc6dca8ccd86a3355e 250 SUPERFAMILY SSF53850 24 244 3.37E-28 T 14-09-2016 AY555_RS10135 e2e1ad910fcf77311b089ff397af9a74 84 SUPERFAMILY SSF158791 16 73 3.4E-7 T 14-09-2016 AY555_RS10135 e2e1ad910fcf77311b089ff397af9a74 84 Gene3D G3DSA:1.25.60.10 11 74 2.5E-6 T 14-09-2016 AY555_RS07830 35bcf6d746c6c3f412e346476e8ecd67 392 Gene3D G3DSA:3.40.50.2000 164 355 5.8E-8 T 14-09-2016 AY555_RS07830 35bcf6d746c6c3f412e346476e8ecd67 392 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 1 384 9.0E-78 T 14-09-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 AY555_RS07830 35bcf6d746c6c3f412e346476e8ecd67 392 PANTHER PTHR30372 9 355 8.7E-91 T 14-09-2016 AY555_RS07830 35bcf6d746c6c3f412e346476e8ecd67 392 SUPERFAMILY SSF53756 10 383 1.49E-21 T 14-09-2016 AY555_RS07830 35bcf6d746c6c3f412e346476e8ecd67 392 PANTHER PTHR30372:SF3 9 355 8.7E-91 T 14-09-2016 AY555_RS07830 35bcf6d746c6c3f412e346476e8ecd67 392 Pfam PF02684 Lipid-A-disaccharide synthetase 9 356 3.1E-87 T 14-09-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 AY555_RS00250 bd4622be5144a3ad07fdb99f7b2f0355 624 PANTHER PTHR21666 432 598 1.3E-32 T 14-09-2016 AY555_RS00250 bd4622be5144a3ad07fdb99f7b2f0355 624 SUPERFAMILY SSF53955 432 580 1.23E-42 T 14-09-2016 IPR023346 Lysozyme-like domain AY555_RS00250 bd4622be5144a3ad07fdb99f7b2f0355 624 SUPERFAMILY SSF48435 191 406 1.83E-17 T 14-09-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 AY555_RS00250 bd4622be5144a3ad07fdb99f7b2f0355 624 Gene3D G3DSA:1.10.530.10 433 575 2.4E-40 T 14-09-2016 AY555_RS00250 bd4622be5144a3ad07fdb99f7b2f0355 624 Pfam PF01464 Transglycosylase SLT domain 432 537 5.3E-25 T 14-09-2016 IPR008258 Transglycosylase SLT domain 1 AY555_RS03060 0bc1fa8c351f12d90ad07ffa0bf0e318 209 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 66 200 9.0E-6 T 14-09-2016 IPR010664 Lipopolysaccharide assembly, LptC-related AY555_RS08465 b5145e56048edfe0bc11db7553fe5518 344 Pfam PF13177 DNA polymerase III, delta subunit 19 189 2.4E-37 T 14-09-2016 AY555_RS08465 b5145e56048edfe0bc11db7553fe5518 344 SUPERFAMILY SSF52540 16 229 9.0E-44 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08465 b5145e56048edfe0bc11db7553fe5518 344 PANTHER PTHR11669:SF8 1 251 3.5E-51 T 14-09-2016 AY555_RS08465 b5145e56048edfe0bc11db7553fe5518 344 PANTHER PTHR11669 1 251 3.5E-51 T 14-09-2016 AY555_RS08465 b5145e56048edfe0bc11db7553fe5518 344 Gene3D G3DSA:3.40.50.300 16 188 1.1E-47 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS08550 024e15eb837fc054b6430aa6fc2ea4b8 456 SUPERFAMILY SSF55073 306 447 6.28E-12 T 14-09-2016 IPR029787 Nucleotide cyclase AY555_RS08550 024e15eb837fc054b6430aa6fc2ea4b8 456 Pfam PF00990 Diguanylate cyclase, GGDEF domain 304 447 5.5E-12 T 14-09-2016 IPR000160 GGDEF domain AY555_RS08550 024e15eb837fc054b6430aa6fc2ea4b8 456 SMART SM00267 308 451 0.0059 T 14-09-2016 IPR000160 GGDEF domain AY555_RS08550 024e15eb837fc054b6430aa6fc2ea4b8 456 Gene3D G3DSA:3.40.50.2300 13 128 1.5E-8 T 14-09-2016 AY555_RS08550 024e15eb837fc054b6430aa6fc2ea4b8 456 Gene3D G3DSA:3.30.70.270 305 447 8.2E-15 T 14-09-2016 AY555_RS08550 024e15eb837fc054b6430aa6fc2ea4b8 456 SUPERFAMILY SSF52172 13 138 1.76E-11 T 14-09-2016 IPR011006 CheY-like superfamily AY555_RS01615 e08d083ac3dffd36ff5362725fee2d88 193 Pfam PF00161 Ribosome inactivating protein 4 70 1.5E-4 T 14-09-2016 IPR001574 Ribosome-inactivating protein GO:0017148|GO:0030598 AY555_RS01615 e08d083ac3dffd36ff5362725fee2d88 193 SUPERFAMILY SSF56371 12 95 1.7E-6 T 14-09-2016 IPR001574 Ribosome-inactivating protein GO:0017148|GO:0030598 AY555_RS03640 2361350bb4015ed89909f4b0cd4de746 195 Pfam PF04390 Lipopolysaccharide-assembly 15 178 4.7E-14 T 14-09-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 AY555_RS09580 590252919aed6f9803dbdf55fae49040 378 PIRSF PIRSF035865 1 369 4.8E-85 T 14-09-2016 IPR014598 Uncharacterised conserved protein UCP035865 AY555_RS09580 590252919aed6f9803dbdf55fae49040 378 Pfam PF10098 Uncharacterised protein conserved in bacteria (DUF2336) 91 348 4.0E-72 T 14-09-2016 IPR019285 Protein of unknown function DUF2336 AY555_RS09580 590252919aed6f9803dbdf55fae49040 378 PANTHER PTHR40253 1 378 6.0E-18 T 14-09-2016 AY555_RS06960 5a72b31cccd9754297be07b49f5eafe9 336 PANTHER PTHR33986 75 335 1.9E-38 T 14-09-2016 AY555_RS06960 5a72b31cccd9754297be07b49f5eafe9 336 Pfam PF06258 Mitochondrial fission ELM1 17 326 1.8E-86 T 14-09-2016 IPR009367 Mitochondrial fission protein ELM1-like AY555_RS07230 1eacd7dec63d151170f5e65ceb5dd337 129 SMART SM00448 5 119 9.3E-29 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS07230 1eacd7dec63d151170f5e65ceb5dd337 129 SUPERFAMILY SSF52172 5 126 3.13E-32 T 14-09-2016 IPR011006 CheY-like superfamily AY555_RS07230 1eacd7dec63d151170f5e65ceb5dd337 129 Gene3D G3DSA:3.40.50.2300 5 125 1.8E-32 T 14-09-2016 AY555_RS07230 1eacd7dec63d151170f5e65ceb5dd337 129 PANTHER PTHR26402 5 125 6.6E-31 T 14-09-2016 AY555_RS07230 1eacd7dec63d151170f5e65ceb5dd337 129 Pfam PF00072 Response regulator receiver domain 7 119 7.2E-24 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AY555_RS00005 6490dabffd1c41ca36c906949475a839 133 Pfam PF11351 Holin of 3TMs, for gene-transfer release 17 120 6.2E-22 T 14-09-2016 IPR021497 Holin of 3TMs, for gene-transfer release AY555_RS00205 5a972121363ff6a8f6cd79273d8df882 658 Pfam PF01973 Protein of unknown function DUF115 249 418 8.1E-28 T 14-09-2016 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like AY555_RS00205 5a972121363ff6a8f6cd79273d8df882 658 Gene3D G3DSA:3.90.1480.10 273 509 2.0E-8 T 14-09-2016 AY555_RS09490 c5bdaf8cb3fea9713ec10888942afd34 269 Gene3D G3DSA:3.30.1330.60 158 240 4.1E-6 T 14-09-2016 IPR006665 OmpA-like domain AY555_RS09490 c5bdaf8cb3fea9713ec10888942afd34 269 SUPERFAMILY SSF103088 161 239 1.14E-6 T 14-09-2016 IPR006665 OmpA-like domain AY555_RS09490 c5bdaf8cb3fea9713ec10888942afd34 269 Pfam PF00691 OmpA family 173 245 8.8E-5 T 14-09-2016 IPR006665 OmpA-like domain AY555_RS02770 1ef055640295ec00eb7ec80fd86456ca 116 Pfam PF10618 Phage tail tube protein 4 115 6.1E-22 T 14-09-2016 IPR019596 Bacteriophage Mu, GpM, tail tube AY555_RS08285 96c821b4b544a86a5cd4caedb0d3e380 132 Pfam PF02954 Bacterial regulatory protein, Fis family 83 122 2.4E-13 T 14-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AY555_RS08285 96c821b4b544a86a5cd4caedb0d3e380 132 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 89 106 5.8E-12 T 14-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AY555_RS08285 96c821b4b544a86a5cd4caedb0d3e380 132 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 106 126 5.8E-12 T 14-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AY555_RS08285 96c821b4b544a86a5cd4caedb0d3e380 132 SUPERFAMILY SSF46689 56 125 1.33E-16 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AY555_RS08285 96c821b4b544a86a5cd4caedb0d3e380 132 Gene3D G3DSA:1.10.10.60 58 125 3.7E-20 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AY555_RS08285 96c821b4b544a86a5cd4caedb0d3e380 132 PANTHER PTHR32071 54 126 9.6E-14 T 14-09-2016 AY555_RS07900 e582a3285b066bad91f41b39244bcb83 176 PANTHER PTHR37953 1 165 9.5E-32 T 14-09-2016 AY555_RS07900 e582a3285b066bad91f41b39244bcb83 176 PANTHER PTHR37953:SF1 1 165 9.5E-32 T 14-09-2016 AY555_RS07900 e582a3285b066bad91f41b39244bcb83 176 Pfam PF02643 Uncharacterized ACR, COG1430 55 157 9.7E-29 T 14-09-2016 IPR003795 Protein of unknown function DUF192 AY555_RS10520 0c9e8696f7eb42aa0296aa13978dd849 252 PANTHER PTHR35334:SF2 2 252 2.1E-128 T 14-09-2016 AY555_RS10520 0c9e8696f7eb42aa0296aa13978dd849 252 PANTHER PTHR35334 2 252 2.1E-128 T 14-09-2016 AY555_RS09500 59dc5dcc6304338f2bdde71c5a2363f6 178 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 96 126 0.0023 T 14-09-2016 IPR001451 Hexapeptide repeat AY555_RS09500 59dc5dcc6304338f2bdde71c5a2363f6 178 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 21 49 2.1E-4 T 14-09-2016 IPR001451 Hexapeptide repeat AY555_RS09500 59dc5dcc6304338f2bdde71c5a2363f6 178 Gene3D G3DSA:2.160.10.10 15 174 1.5E-44 T 14-09-2016 AY555_RS09500 59dc5dcc6304338f2bdde71c5a2363f6 178 PANTHER PTHR13061 5 173 9.7E-76 T 14-09-2016 AY555_RS09500 59dc5dcc6304338f2bdde71c5a2363f6 178 SUPERFAMILY SSF51161 10 173 1.66E-42 T 14-09-2016 IPR011004 Trimeric LpxA-like AY555_RS02750 cc76c08aa0b5a45b01aa2abdbb66d67b 385 ProDom PD332323 CIRCULATION DNA PROTEIN TAIL/DNA PHAGE PROPHAGE VIRION FLUMU BACTERIOPHAGE MU-LIKE 3 124 2.0E-36 T 14-09-2016 IPR009826 DNA circulation, N-terminal AY555_RS02750 cc76c08aa0b5a45b01aa2abdbb66d67b 385 Pfam PF07157 DNA circularisation protein N-terminus 8 95 9.0E-34 T 14-09-2016 IPR009826 DNA circulation, N-terminal AY555_RS00270 039b2b3369501399e0af4544b3577f02 309 PIRSF PIRSF010376 6 296 7.7E-73 T 14-09-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 AY555_RS00270 039b2b3369501399e0af4544b3577f02 309 SUPERFAMILY SSF55060 169 286 5.76E-25 T 14-09-2016 IPR013750 GHMP kinase, C-terminal domain AY555_RS00270 039b2b3369501399e0af4544b3577f02 309 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 8 290 29.508 T 14-09-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 AY555_RS00270 039b2b3369501399e0af4544b3577f02 309 PANTHER PTHR20861:SF2 12 285 1.4E-56 T 14-09-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 AY555_RS00270 039b2b3369501399e0af4544b3577f02 309 Gene3D G3DSA:3.30.70.890 169 287 7.4E-25 T 14-09-2016 IPR013750 GHMP kinase, C-terminal domain AY555_RS00270 039b2b3369501399e0af4544b3577f02 309 SUPERFAMILY SSF54211 7 163 9.87E-38 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AY555_RS00270 039b2b3369501399e0af4544b3577f02 309 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 9 271 2.0E-50 T 14-09-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 AY555_RS00270 039b2b3369501399e0af4544b3577f02 309 Pfam PF00288 GHMP kinases N terminal domain 94 151 1.7E-7 T 14-09-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 AY555_RS00270 039b2b3369501399e0af4544b3577f02 309 Gene3D G3DSA:3.30.230.10 9 165 4.7E-44 T 14-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AY555_RS00270 039b2b3369501399e0af4544b3577f02 309 Pfam PF08544 GHMP kinases C terminal 222 278 1.4E-6 T 14-09-2016 IPR013750 GHMP kinase, C-terminal domain AY555_RS00270 039b2b3369501399e0af4544b3577f02 309 PANTHER PTHR20861 12 285 1.4E-56 T 14-09-2016 AY555_RS03410 8cd6c9d8f1c3449fee60c3d3061aa3db 243 Gene3D G3DSA:1.10.287.110 183 239 5.7E-9 T 14-09-2016 IPR001623 DnaJ domain AY555_RS03410 8cd6c9d8f1c3449fee60c3d3061aa3db 243 SUPERFAMILY SSF46565 184 239 1.2E-9 T 14-09-2016 IPR001623 DnaJ domain AY555_RS04375 2d7ea5286e861734ac1c008c0c68297d 242 PANTHER PTHR35936 20 230 4.3E-39 T 14-09-2016 AY555_RS04375 2d7ea5286e861734ac1c008c0c68297d 242 PANTHER PTHR35936:SF3 20 230 4.3E-39 T 14-09-2016 AY555_RS04375 2d7ea5286e861734ac1c008c0c68297d 242 SUPERFAMILY SSF53850 16 233 1.52E-18 T 14-09-2016 AY555_RS08835 a7a26eae13957051035613226dcac983 168 SUPERFAMILY SSF55083 3 160 5.62E-44 T 14-09-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 AY555_RS08835 a7a26eae13957051035613226dcac983 168 Gene3D G3DSA:3.30.70.560 3 160 9.9E-47 T 14-09-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 AY555_RS08835 a7a26eae13957051035613226dcac983 168 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 138 1.7E-34 T 14-09-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 AY555_RS08835 a7a26eae13957051035613226dcac983 168 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 4 138 9.7E-32 T 14-09-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 AY555_RS08835 a7a26eae13957051035613226dcac983 168 PANTHER PTHR20941 3 163 9.7E-47 T 14-09-2016 AY555_RS09630 932839a7e7597c5f5abb3828056aa7d1 255 PANTHER PTHR10108 27 162 4.9E-19 T 14-09-2016 AY555_RS09630 932839a7e7597c5f5abb3828056aa7d1 255 Pfam PF13649 Methyltransferase domain 50 144 1.6E-15 T 14-09-2016 AY555_RS09630 932839a7e7597c5f5abb3828056aa7d1 255 Gene3D G3DSA:3.40.50.150 8 158 1.9E-27 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS09630 932839a7e7597c5f5abb3828056aa7d1 255 SUPERFAMILY SSF53335 1 168 3.92E-33 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS05605 730313b08972f8b3684fe1266b30b2a8 523 Pfam PF12236 Bacteriophage head to tail connecting protein 30 498 4.1E-137 T 14-09-2016 IPR020991 Head-to-tail joining protein, podovirus-type AY555_RS05130 48bcdd9b732a314644488b82ce8d71cf 312 PANTHER PTHR30160 3 294 1.3E-22 T 14-09-2016 AY555_RS05130 48bcdd9b732a314644488b82ce8d71cf 312 Gene3D G3DSA:3.40.50.2000 159 292 1.9E-31 T 14-09-2016 AY555_RS05130 48bcdd9b732a314644488b82ce8d71cf 312 SUPERFAMILY SSF53756 2 303 2.41E-63 T 14-09-2016 AY555_RS05130 48bcdd9b732a314644488b82ce8d71cf 312 Gene3D G3DSA:3.40.50.2000 2 143 3.1E-24 T 14-09-2016 AY555_RS05130 48bcdd9b732a314644488b82ce8d71cf 312 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 71 290 1.3E-22 T 14-09-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 AY555_RS01105 a565a9947967ff709cb62ded59cefeed 187 SUPERFAMILY SSF52402 41 175 3.77E-9 T 14-09-2016 AY555_RS01105 a565a9947967ff709cb62ded59cefeed 187 Gene3D G3DSA:3.40.50.620 41 175 1.1E-9 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS01105 a565a9947967ff709cb62ded59cefeed 187 Pfam PF00582 Universal stress protein family 42 163 1.4E-7 T 14-09-2016 IPR006016 UspA GO:0006950 AY555_RS01595 ad54a2c7f6cb26e0c293bb113e5218bb 236 PANTHER PTHR35809 4 228 5.7E-67 T 14-09-2016 AY555_RS01595 ad54a2c7f6cb26e0c293bb113e5218bb 236 Pfam PF02666 Phosphatidylserine decarboxylase 52 221 4.6E-27 T 14-09-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 AY555_RS01595 ad54a2c7f6cb26e0c293bb113e5218bb 236 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 23 225 3.5E-47 T 14-09-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 AY555_RS01595 ad54a2c7f6cb26e0c293bb113e5218bb 236 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 15 225 35.156 T 14-09-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 AY555_RS05420 e4e35fe78a58eda296d9fea456c37eb6 210 PANTHER PTHR12992 38 195 5.5E-51 T 14-09-2016 AY555_RS05420 e4e35fe78a58eda296d9fea456c37eb6 210 SUPERFAMILY SSF55811 37 191 1.33E-34 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AY555_RS05420 e4e35fe78a58eda296d9fea456c37eb6 210 Gene3D G3DSA:3.90.79.10 37 195 1.6E-41 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AY555_RS05420 e4e35fe78a58eda296d9fea456c37eb6 210 Pfam PF00293 NUDIX domain 39 150 7.5E-13 T 14-09-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AY555_RS05550 025e928b9ea7225bc2838df4d3da6454 250 PANTHER PTHR10859:SF49 3 246 3.4E-75 T 14-09-2016 AY555_RS05550 025e928b9ea7225bc2838df4d3da6454 250 PANTHER PTHR10859 3 246 3.4E-75 T 14-09-2016 AY555_RS05550 025e928b9ea7225bc2838df4d3da6454 250 Pfam PF00535 Glycosyl transferase family 2 10 121 2.6E-23 T 14-09-2016 IPR001173 Glycosyltransferase 2-like AY555_RS05550 025e928b9ea7225bc2838df4d3da6454 250 SUPERFAMILY SSF53448 5 234 1.61E-39 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AY555_RS05550 025e928b9ea7225bc2838df4d3da6454 250 Gene3D G3DSA:3.90.550.10 6 187 6.4E-23 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AY555_RS07825 81d15991cca2421f39f3dad9b75121e0 280 PANTHER PTHR39962 8 275 7.0E-58 T 14-09-2016 AY555_RS07825 81d15991cca2421f39f3dad9b75121e0 280 PANTHER PTHR39962:SF1 8 275 7.0E-58 T 14-09-2016 AY555_RS07825 81d15991cca2421f39f3dad9b75121e0 280 Pfam PF06230 Protein of unknown function (DUF1009) 63 270 1.0E-71 T 14-09-2016 IPR010415 Protein of unknown function DUF1009 AY555_RS08695 e3b5817135275c00decbe6e11b6a0616 249 Pfam PF02237 Biotin protein ligase C terminal domain 207 249 2.0E-5 T 14-09-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 AY555_RS08695 e3b5817135275c00decbe6e11b6a0616 249 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 18 246 2.4E-47 T 14-09-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 AY555_RS08695 e3b5817135275c00decbe6e11b6a0616 249 Pfam PF03099 Biotin/lipoate A/B protein ligase family 22 139 7.2E-12 T 14-09-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 AY555_RS08695 e3b5817135275c00decbe6e11b6a0616 249 PANTHER PTHR12835 13 245 2.9E-56 T 14-09-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 AY555_RS08695 e3b5817135275c00decbe6e11b6a0616 249 SUPERFAMILY SSF55681 11 198 1.37E-47 T 14-09-2016 AY555_RS08695 e3b5817135275c00decbe6e11b6a0616 249 Gene3D G3DSA:3.30.930.10 10 198 7.1E-54 T 14-09-2016 AY555_RS01130 605c427a4633513d93e3a04d78e8b2e5 151 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 21 147 3.4E-43 T 14-09-2016 IPR003791 Protein of unknown function UPF0178 AY555_RS01130 605c427a4633513d93e3a04d78e8b2e5 151 PANTHER PTHR35146:SF1 2 148 3.6E-37 T 14-09-2016 AY555_RS01130 605c427a4633513d93e3a04d78e8b2e5 151 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 5 149 28.654 T 14-09-2016 IPR003791 Protein of unknown function UPF0178 AY555_RS01130 605c427a4633513d93e3a04d78e8b2e5 151 PANTHER PTHR35146 2 148 3.6E-37 T 14-09-2016 AY555_RS02700 6176555a1f71c9d660a79e3f97480289 189 Gene3D G3DSA:3.30.450.20 70 134 2.5E-5 T 14-09-2016 AY555_RS02700 6176555a1f71c9d660a79e3f97480289 189 SUPERFAMILY SSF55785 70 169 1.88E-7 T 14-09-2016 IPR000014 PAS domain AY555_RS08965 a1866d72310126dfcf09cbe0840bf334 233 Pfam PF06904 Extensin-like protein C-terminus 61 231 1.8E-49 T 14-09-2016 IPR009683 Extensin-like, C-terminal AY555_RS06910 4fb8172a35458be5b9e8ebc5e9ff1b4c 133 Pfam PF11351 Holin of 3TMs, for gene-transfer release 14 120 3.6E-22 T 14-09-2016 IPR021497 Holin of 3TMs, for gene-transfer release AY555_RS08125 77ded12f8739d1715ce546de5e56eb45 163 PANTHER PTHR35024 22 116 5.2E-14 T 14-09-2016 AY555_RS08125 77ded12f8739d1715ce546de5e56eb45 163 Pfam PF04519 Polymer-forming cytoskeletal 22 116 2.0E-23 T 14-09-2016 IPR007607 Protein of unknown function DUF583 AY555_RS00200 d7840b5356c14ab81efb80553d586e38 536 Pfam PF00700 Bacterial flagellin C-terminal helical region 457 535 1.4E-9 T 14-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AY555_RS00200 d7840b5356c14ab81efb80553d586e38 536 SUPERFAMILY SSF64518 268 379 9.94E-20 T 14-09-2016 AY555_RS00200 d7840b5356c14ab81efb80553d586e38 536 SUPERFAMILY SSF64518 461 532 9.94E-20 T 14-09-2016 AY555_RS00200 d7840b5356c14ab81efb80553d586e38 536 SUPERFAMILY SSF64518 1 237 9.94E-20 T 14-09-2016 AY555_RS00220 dcd74372720c6f350ef7174238d98a4a 158 Pfam PF07378 Flagellar protein FlbT 17 140 5.4E-33 T 14-09-2016 IPR009967 Flagellum biosynthesis repressor FlbT GO:0006402|GO:0048027|GO:1902209 AY555_RS08105 0770a804a4c2090090a5c1ab62fef544 150 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 136 1.7E-29 T 14-09-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain AY555_RS08105 0770a804a4c2090090a5c1ab62fef544 150 Gene3D G3DSA:3.30.530.20 1 144 9.9E-50 T 14-09-2016 IPR023393 START-like domain AY555_RS08105 0770a804a4c2090090a5c1ab62fef544 150 PANTHER PTHR12901 6 148 9.5E-55 T 14-09-2016 AY555_RS08105 0770a804a4c2090090a5c1ab62fef544 150 SUPERFAMILY SSF55961 1 144 2.33E-32 T 14-09-2016 AY555_RS02720 88c3655e151bf972cbc153196d00ecaa 358 PANTHER PTHR37829 5 358 3.8E-59 T 14-09-2016 AY555_RS02720 88c3655e151bf972cbc153196d00ecaa 358 Pfam PF04865 Baseplate J-like protein 68 323 8.8E-58 T 14-09-2016 IPR006949 Baseplate protein J-like AY555_RS09765 aa5d317083beac165823bae94b41734f 292 PANTHER PTHR30520 251 284 9.3E-71 T 14-09-2016 AY555_RS09765 aa5d317083beac165823bae94b41734f 292 PANTHER PTHR30520 2 235 9.3E-71 T 14-09-2016 AY555_RS09765 aa5d317083beac165823bae94b41734f 292 Gene3D G3DSA:1.20.1080.10 36 284 9.2E-71 T 14-09-2016 IPR023271 Aquaporin-like AY555_RS09765 aa5d317083beac165823bae94b41734f 292 Pfam PF01226 Formate/nitrite transporter 20 280 3.0E-67 T 14-09-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 AY555_RS06480 2c42ab8474c4499ba7deb1432b6b5ee7 135 Pfam PF06995 Phage P2 GpU 9 128 2.0E-42 T 14-09-2016 IPR009734 Myoviridae, GpU AY555_RS06480 2c42ab8474c4499ba7deb1432b6b5ee7 135 PIRSF PIRSF029208 1 134 6.4E-47 T 14-09-2016 IPR016912 Bacteriophage P2, GpU AY555_RS02235 bd2344ea3da7058d9b8420f0ddb5e921 292 Pfam PF04366 Las17-binding protein actin regulator 121 241 2.8E-24 T 14-09-2016 IPR007461 Ysc84 actin-binding domain AY555_RS02235 bd2344ea3da7058d9b8420f0ddb5e921 292 PANTHER PTHR15629 74 240 1.6E-24 T 14-09-2016 AY555_RS02350 9304567a65b2ad1ce7529232b19fc67d 347 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 159 340 8.5E-25 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS02350 9304567a65b2ad1ce7529232b19fc67d 347 Gene3D G3DSA:1.10.3720.10 135 338 5.2E-21 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS02350 9304567a65b2ad1ce7529232b19fc67d 347 PANTHER PTHR30325 2 345 5.1E-142 T 14-09-2016 AY555_RS02350 9304567a65b2ad1ce7529232b19fc67d 347 SUPERFAMILY SSF161098 142 323 3.53E-22 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AY555_RS08635 45e523d4391052b1be4177fc1eb97419 90 Pfam PF02416 mttA/Hcf106 family 5 57 1.1E-7 T 14-09-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AY555_RS08635 45e523d4391052b1be4177fc1eb97419 90 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 4 48 1.7E-16 T 14-09-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AY555_RS08635 45e523d4391052b1be4177fc1eb97419 90 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 75 18.722 T 14-09-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AY555_RS08860 dea4376c24096cb850769cb298f7c225 119 Pfam PF04977 Septum formation initiator 23 102 1.4E-18 T 14-09-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 AY555_RS04130 5f33c0db90ab63b51cd9abdf6232c5fe 97 Pfam PF06233 Usg-like family 17 96 5.9E-38 T 14-09-2016 IPR009354 Usg-like UniPathway: UPA00035 AY555_RS06530 04be75baebcf7161929302d3cd3db227 223 Pfam PF04717 Type VI secretion system, phage-baseplate injector 7 117 8.9E-42 T 14-09-2016 IPR006531 Gp5 N-terminal AY555_RS06530 04be75baebcf7161929302d3cd3db227 223 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 9 220 2.8E-50 T 14-09-2016 IPR013046 Phage baseplate assembly protein V/Gp45 AY555_RS04880 2a1a7662aea14de3e247fed987023798 257 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 19 252 3.4E-66 T 14-09-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase AY555_RS04880 2a1a7662aea14de3e247fed987023798 257 Gene3D G3DSA:3.60.140.10 3 254 6.3E-84 T 14-09-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase AY555_RS04880 2a1a7662aea14de3e247fed987023798 257 PANTHER PTHR30616 1 255 1.8E-72 T 14-09-2016 AY555_RS04880 2a1a7662aea14de3e247fed987023798 257 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 24 252 2.1E-49 T 14-09-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase AY555_RS04880 2a1a7662aea14de3e247fed987023798 257 SUPERFAMILY SSF64438 5 253 1.5E-78 T 14-09-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic AY555_RS09470 0742ee75a01e020e6b279ddeb849cbf5 589 Pfam PF02272 DHHA1 domain 395 457 1.3E-8 T 14-09-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 AY555_RS09470 0742ee75a01e020e6b279ddeb849cbf5 589 Pfam PF01368 DHH family 91 215 5.7E-10 T 14-09-2016 IPR001667 DDH domain AY555_RS09470 0742ee75a01e020e6b279ddeb849cbf5 589 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 37 585 1.6E-166 T 14-09-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 AY555_RS09470 0742ee75a01e020e6b279ddeb849cbf5 589 PANTHER PTHR30255 10 589 7.7E-195 T 14-09-2016 AY555_RS09470 0742ee75a01e020e6b279ddeb849cbf5 589 SUPERFAMILY SSF64182 65 472 1.01E-115 T 14-09-2016 AY555_RS09470 0742ee75a01e020e6b279ddeb849cbf5 589 PANTHER PTHR30255:SF2 10 589 7.7E-195 T 14-09-2016 AY555_RS09015 6acb90ea27da2e3ef5656a65c1a8171f 85 Pfam PF06698 Protein of unknown function (DUF1192) 15 59 2.2E-12 T 14-09-2016 IPR009579 Protein of unknown function DUF1192 AY555_RS08880 88ad994ab95105b6184b06ec88d9bed8 103 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 69 6.7E-17 T 14-09-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AY555_RS08880 88ad994ab95105b6184b06ec88d9bed8 103 Pfam PF03840 Preprotein translocase SecG subunit 4 68 2.3E-15 T 14-09-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AY555_RS08880 88ad994ab95105b6184b06ec88d9bed8 103 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 1.1E-9 T 14-09-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AY555_RS08880 88ad994ab95105b6184b06ec88d9bed8 103 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 1.1E-9 T 14-09-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AY555_RS06725 5819b18a035107da9f25ef138e878f7f 415 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 82 269 3.4E-16 T 14-09-2016 IPR018642 Protein of unknown function DUF2066 AY555_RS09870 4ed2d0cb9b3e4272365e91a6c75ee8a9 432 Pfam PF10082 Putative beta-barrel porin 2 144 431 1.8E-27 T 14-09-2016 IPR018759 Putative beta-barrel porin 2 AY555_RS09895 98f5b0ace4a2ce9501b225344828f00c 119 Pfam PF04138 GtrA-like protein 3 116 4.0E-20 T 14-09-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 AY555_RS07870 1d9c83a4f6f6def724c21e30973ce61a 99 Gene3D G3DSA:3.30.1050.10 14 99 1.7E-21 T 14-09-2016 IPR003033 SCP2 sterol-binding domain AY555_RS07870 1d9c83a4f6f6def724c21e30973ce61a 99 SUPERFAMILY SSF55718 16 99 1.14E-18 T 14-09-2016 IPR003033 SCP2 sterol-binding domain AY555_RS07870 1d9c83a4f6f6def724c21e30973ce61a 99 Pfam PF02036 SCP-2 sterol transfer family 13 99 2.8E-16 T 14-09-2016 IPR003033 SCP2 sterol-binding domain AY555_RS02900 1c2fe479460532acb04a1212598d5776 200 Gene3D G3DSA:3.40.50.150 22 135 3.5E-4 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS02880 bbac0ddbb80ec6a9fa55b97f5c8c0375 71 Gene3D G3DSA:1.10.260.40 13 58 3.9E-8 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AY555_RS04510 bbac0ddbb80ec6a9fa55b97f5c8c0375 71 Gene3D G3DSA:1.10.260.40 13 58 3.9E-8 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AY555_RS01835 cea44745712a60f67bc6c46b8a2fe602 292 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 8 289 1.1E-46 T 14-09-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AY555_RS01835 cea44745712a60f67bc6c46b8a2fe602 292 PANTHER PTHR30606 18 289 3.2E-60 T 14-09-2016 AY555_RS03110 70fe10987fb32366dbcee8dd399c870d 253 Pfam PF09608 Putative transmembrane protein (Alph_Pro_TM) 30 252 4.4E-75 T 14-09-2016 IPR019088 Conserved hypothetical protein CHP02186-related, transmembrane AY555_RS07495 c2379220f93596680611535074f2a705 239 Pfam PF01618 MotA/TolQ/ExbB proton channel family 88 221 5.1E-40 T 14-09-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AY555_RS07495 c2379220f93596680611535074f2a705 239 PANTHER PTHR30625:SF3 19 238 1.7E-60 T 14-09-2016 AY555_RS07495 c2379220f93596680611535074f2a705 239 TIGRFAM TIGR02796 tolQ: protein TolQ 19 233 1.3E-84 T 14-09-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 AY555_RS07495 c2379220f93596680611535074f2a705 239 PANTHER PTHR30625 19 238 1.7E-60 T 14-09-2016 AY555_RS09510 e66dfa4f18ac702cfa8bd66f7c9a09c8 383 PIRSF PIRSF028704 2 383 8.6E-76 T 14-09-2016 IPR014550 Uncharacterised conserved protein UCP028704, OpgC AY555_RS09510 e66dfa4f18ac702cfa8bd66f7c9a09c8 383 PANTHER PTHR38592 14 359 6.4E-49 T 14-09-2016 AY555_RS09510 e66dfa4f18ac702cfa8bd66f7c9a09c8 383 Pfam PF10129 OpgC protein 14 361 3.1E-80 T 14-09-2016 IPR014550 Uncharacterised conserved protein UCP028704, OpgC AY555_RS02465 8bdc184da3a3c7ada63d58f9e71af85c 195 Pfam PF02698 DUF218 domain 48 165 4.2E-11 T 14-09-2016 IPR003848 Domain of unknown function DUF218 AY555_RS02465 8bdc184da3a3c7ada63d58f9e71af85c 195 Gene3D G3DSA:3.40.50.620 39 161 1.4E-9 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS02465 8bdc184da3a3c7ada63d58f9e71af85c 195 ProDom PD207074 TRANSMEMBRANE MEMBRANE UNCHARACTERIZED RC1356 RP875 16 164 2.0E-10 T 14-09-2016 AY555_RS01935 d8ed925f08179898c96bd5fd36b0afed 349 Gene3D G3DSA:3.40.50.300 146 250 1.6E-6 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AY555_RS07620 ef73bd07a62b25a05fd3d4f93d16cb3a 136 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 50 133 3.0E-35 T 14-09-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2 AY555_RS07620 ef73bd07a62b25a05fd3d4f93d16cb3a 136 PANTHER PTHR10160 1 135 4.8E-35 T 14-09-2016 AY555_RS09330 0bd8315388abd89796b8b0aa1e48e08b 523 Pfam PF02120 Flagellar hook-length control protein FliK 396 470 5.0E-17 T 14-09-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal AY555_RS06475 6f5592db8c5385aaf9e006766674b0b8 69 Pfam PF05489 Phage Tail Protein X 6 58 1.4E-20 T 14-09-2016 IPR008861 Phage Tail Protein X-like AY555_RS02695 f384e218239c304c32154dc790bf8b03 132 Pfam PF11351 Holin of 3TMs, for gene-transfer release 10 120 7.9E-19 T 14-09-2016 IPR021497 Holin of 3TMs, for gene-transfer release AY555_RS07685 b8fb7a42ba6d067da990eb13a3fbb8fa 253 Gene3D G3DSA:3.30.70.270 97 241 6.3E-8 T 14-09-2016 AY555_RS07685 b8fb7a42ba6d067da990eb13a3fbb8fa 253 SUPERFAMILY SSF55073 101 240 4.16E-7 T 14-09-2016 IPR029787 Nucleotide cyclase AY555_RS07685 b8fb7a42ba6d067da990eb13a3fbb8fa 253 Pfam PF00990 Diguanylate cyclase, GGDEF domain 97 241 1.9E-6 T 14-09-2016 IPR000160 GGDEF domain AY555_RS01085 b61ccda8f6fb589f8c09146318408555 463 SUPERFAMILY SSF81442 12 449 1.96E-22 T 14-09-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AY555_RS01085 b61ccda8f6fb589f8c09146318408555 463 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 14 406 6.6E-13 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AY555_RS03215 ce4d4dda973bbaf7a77a73d7b8279db6 139 PANTHER PTHR14087 1 134 4.0E-53 T 14-09-2016 AY555_RS03215 ce4d4dda973bbaf7a77a73d7b8279db6 139 Gene3D G3DSA:3.10.590.10 1 132 3.0E-26 T 14-09-2016 IPR002740 EVE domain AY555_RS03215 ce4d4dda973bbaf7a77a73d7b8279db6 139 SUPERFAMILY SSF88697 1 134 9.11E-49 T 14-09-2016 IPR015947 PUA-like domain AY555_RS03215 ce4d4dda973bbaf7a77a73d7b8279db6 139 Pfam PF01878 EVE domain 3 132 1.5E-40 T 14-09-2016 IPR002740 EVE domain AY555_RS00380 21981547fa344b6cae58bad1fb67bf84 118 PANTHER PTHR33931:SF2 6 117 2.3E-21 T 14-09-2016 AY555_RS00380 21981547fa344b6cae58bad1fb67bf84 118 Pfam PF03788 LrgA family 13 116 1.4E-24 T 14-09-2016 IPR005538 LrgA/CidA family GO:0016021 AY555_RS00380 21981547fa344b6cae58bad1fb67bf84 118 PANTHER PTHR33931 6 117 2.3E-21 T 14-09-2016 AY555_RS03650 e5c9ec46e5a9e2d6ad504c61043f11c8 176 Pfam PF12100 Domain of unknown function (DUF3576) 72 171 1.3E-44 T 14-09-2016 IPR021959 Protein of unknown function DUF3576 AY555_RS03970 c4bd52599c46a404cc73e750230a9755 138 Pfam PF05443 ROS/MUCR transcriptional regulator protein 10 129 1.5E-49 T 14-09-2016 IPR008807 ROSMUCR transcriptional regulator GO:0003677|GO:0006355|GO:0008270 AY555_RS00245 0c77ab1ac1d98b55dcbf9d6d231339ec 331 Pfam PF03601 Conserved hypothetical protein 698 12 311 1.9E-69 T 14-09-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 AY555_RS00245 0c77ab1ac1d98b55dcbf9d6d231339ec 331 PANTHER PTHR30106 11 331 9.3E-62 T 14-09-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 AY555_RS06470 cb595f1a6af3cbd95f7e8cd6646efb15 337 SUPERFAMILY SSF69279 8 190 2.38E-17 T 14-09-2016 AY555_RS06470 cb595f1a6af3cbd95f7e8cd6646efb15 337 Pfam PF05954 Phage late control gene D protein (GPD) 117 323 2.7E-16 T 14-09-2016 AY555_RS02945 5c2c95212e01687e21df17a2ce3921ed 93 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 17 80 5.6E-19 T 14-09-2016 IPR025528 BrnA antitoxin of type II toxin-antitoxin system AY555_RS04550 5c2c95212e01687e21df17a2ce3921ed 93 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 17 80 5.6E-19 T 14-09-2016 IPR025528 BrnA antitoxin of type II toxin-antitoxin system AY555_RS00175 23376dc731ed897bd1ad278b7546c43f 175 Pfam PF10768 Class II flagellar assembly regulator 19 158 4.3E-35 T 14-09-2016 IPR019704 Flagellar assembly regulator FliX, class II AY555_RS08275 a45b93cc9d4e7d96d9953fe6b4f90fa6 272 Pfam PF01578 Cytochrome C assembly protein 67 271 8.2E-12 T 14-09-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AY555_RS08275 a45b93cc9d4e7d96d9953fe6b4f90fa6 272 PANTHER PTHR38034 1 272 2.4E-13 T 14-09-2016 AY555_RS02675 c79af353d9badbbd6d64fc839f6ae606 111 Pfam PF06305 Protein of unknown function (DUF1049) 24 86 2.1E-7 T 14-09-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 AY555_RS09415 317b5298499b1af61d37714bc62d2910 303 SUPERFAMILY SSF53850 85 265 1.3E-12 T 14-09-2016 AY555_RS06500 059785f05a21cd7b19990219b588a769 392 Pfam PF04984 Phage tail sheath protein 91 380 3.3E-53 T 14-09-2016 IPR007067 Tail sheath protein AY555_RS06500 059785f05a21cd7b19990219b588a769 392 Pfam PF04984 Phage tail sheath protein 3 91 1.1E-11 T 14-09-2016 IPR007067 Tail sheath protein AY555_RS06500 059785f05a21cd7b19990219b588a769 392 PANTHER PTHR35861 1 389 1.5E-87 T 14-09-2016 AY555_RS06500 059785f05a21cd7b19990219b588a769 392 PANTHER PTHR35861:SF1 1 389 1.5E-87 T 14-09-2016 AY555_RS07720 095d5df19ceeafd708b3dd28419729fb 134 Pfam PF07750 GcrA cell cycle regulator 60 122 1.5E-18 T 14-09-2016 IPR011681 GcrA cell cycle regulator AY555_RS08215 6f9e441b089f211548096ef3dd6cd8a0 182 Pfam PF02620 Uncharacterized ACR, COG1399 71 179 4.1E-10 T 14-09-2016 IPR003772 Protein of unknown function DUF177 AY555_RS01225 d0dfd987ab41f1cc3366c893fa5140ed 72 Pfam PF13770 Domain of unknown function (DUF4169) 2 56 1.4E-14 T 14-09-2016 IPR025227 Protein of unknown function DUF4169 AY555_RS08530 c4d6ee1bf36249350597ae325b2081d6 403 Pfam PF05036 Sporulation related domain 321 401 2.2E-11 T 14-09-2016 IPR007730 Sporulation-related domain GO:0042834 AY555_RS08530 c4d6ee1bf36249350597ae325b2081d6 403 SUPERFAMILY SSF110997 321 401 1.57E-6 T 14-09-2016 IPR007730 Sporulation-related domain GO:0042834 AY555_RS08530 c4d6ee1bf36249350597ae325b2081d6 403 Gene3D G3DSA:3.30.70.1070 320 400 2.9E-4 T 14-09-2016 IPR007730 Sporulation-related domain GO:0042834 AY555_RS08120 9b94312e0ed34c3537b08e9ee650511f 430 PANTHER PTHR21666 298 423 4.6E-40 T 14-09-2016 AY555_RS08120 9b94312e0ed34c3537b08e9ee650511f 430 Pfam PF01551 Peptidase family M23 323 417 2.2E-27 T 14-09-2016 IPR016047 Peptidase M23 AY555_RS08120 9b94312e0ed34c3537b08e9ee650511f 430 SUPERFAMILY SSF51261 291 421 1.2E-47 T 14-09-2016 IPR011055 Duplicated hybrid motif AY555_RS08120 9b94312e0ed34c3537b08e9ee650511f 430 Gene3D G3DSA:2.70.70.10 292 422 4.0E-42 T 14-09-2016 AY555_RS10445 14eb38183af2bc59a89c4da2aff1c9bc 235 Gene3D G3DSA:1.25.40.10 119 213 7.7E-4 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS10445 14eb38183af2bc59a89c4da2aff1c9bc 235 SUPERFAMILY SSF48452 117 214 2.82E-5 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS04335 6e38d039ca7f0027845f189ec7335a08 74 Pfam PF06620 Protein of unknown function (DUF1150) 36 74 4.6E-10 T 14-09-2016 IPR009531 Protein of unknown function DUF1150 AY555_RS01190 2e231269183f2f92a58374542228a527 94 Pfam PF11351 Holin of 3TMs, for gene-transfer release 7 81 1.0E-16 T 14-09-2016 IPR021497 Holin of 3TMs, for gene-transfer release AY555_RS07420 1ad84d15df0320b5cea1d74730e51e7c 269 SUPERFAMILY SSF103088 167 258 3.53E-10 T 14-09-2016 IPR006665 OmpA-like domain AY555_RS07420 1ad84d15df0320b5cea1d74730e51e7c 269 Gene3D G3DSA:3.30.1330.60 171 255 1.5E-10 T 14-09-2016 IPR006665 OmpA-like domain AY555_RS07420 1ad84d15df0320b5cea1d74730e51e7c 269 Pfam PF00691 OmpA family 174 255 2.1E-9 T 14-09-2016 IPR006665 OmpA-like domain AY555_RS00715 b16e3c9ed735a51ec5e356cc2aa063ea 368 PRINTS PR01545 Thermotoga maritima hypothetical protein TM1410 signature 303 320 5.5E-11 T 14-09-2016 IPR016062 Hypothetical protein TM1410-related AY555_RS00715 b16e3c9ed735a51ec5e356cc2aa063ea 368 PRINTS PR01545 Thermotoga maritima hypothetical protein TM1410 signature 280 299 5.5E-11 T 14-09-2016 IPR016062 Hypothetical protein TM1410-related AY555_RS00715 b16e3c9ed735a51ec5e356cc2aa063ea 368 PRINTS PR01545 Thermotoga maritima hypothetical protein TM1410 signature 322 340 5.5E-11 T 14-09-2016 IPR016062 Hypothetical protein TM1410-related AY555_RS00715 b16e3c9ed735a51ec5e356cc2aa063ea 368 PRINTS PR01545 Thermotoga maritima hypothetical protein TM1410 signature 340 359 5.5E-11 T 14-09-2016 IPR016062 Hypothetical protein TM1410-related AY555_RS00715 b16e3c9ed735a51ec5e356cc2aa063ea 368 SUPERFAMILY SSF51445 245 359 6.67E-12 T 14-09-2016 IPR017853 Glycoside hydrolase superfamily AY555_RS04560 dc7320978e35962f1d091f6894ab9af1 154 Pfam PF02498 BRO family, N-terminal domain 56 136 4.4E-5 T 14-09-2016 IPR003497 BRO N-terminal domain AY555_RS03920 bca3818d6c3d7519243c4e432528cd47 300 Pfam PF08902 Domain of unknown function (DUF1848) 13 279 6.1E-81 T 14-09-2016 IPR014998 Protein of unknown function DUF1848 AY555_RS06750 2715db560460b1cdf785e4483c0ca2ac 1099 Pfam PF13116 Protein of unknown function 400 629 3.1E-15 T 14-09-2016 IPR025263 Domain of unknown function DUF3971 AY555_RS06750 2715db560460b1cdf785e4483c0ca2ac 1099 Pfam PF13502 AsmA-like C-terminal region 849 1061 3.1E-10 T 14-09-2016 IPR032712 AsmA-like, C-terminal AY555_RS05015 e8e6e86e4de01edb008cf07e9fae88bb 75 Pfam PF11127 Protein of unknown function (DUF2892) 1 61 1.1E-21 T 14-09-2016 IPR021309 Protein of unknown function DUF2892 AY555_RS03240 b00a5585029426edf9394361ad43e242 415 SUPERFAMILY SSF141868 238 410 1.44E-7 T 14-09-2016 IPR001633 EAL domain AY555_RS06440 617851f649eee699ed6727b8d5bf3da1 307 Gene3D G3DSA:3.40.50.150 2 176 1.8E-23 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS06440 617851f649eee699ed6727b8d5bf3da1 307 SUPERFAMILY SSF53335 4 180 3.99E-31 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS06440 617851f649eee699ed6727b8d5bf3da1 307 SUPERFAMILY SSF53335 248 302 3.99E-31 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS06440 617851f649eee699ed6727b8d5bf3da1 307 Pfam PF00145 C-5 cytosine-specific DNA methylase 75 172 2.5E-13 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AY555_RS07710 5df33606ca75c43c3a7916140c208db0 114 Pfam PF07372 Protein of unknown function (DUF1491) 7 108 2.2E-31 T 14-09-2016 IPR009964 Protein of unknown function DUF1491 AY555_RS06345 984edce939dc4347b94dcb35ffd2be38 354 Pfam PF09375 Imelysin 38 320 9.4E-38 T 14-09-2016 AY555_RS05240 de103b34233dacf5d223819500dfb376 61 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 2 50 8.1E-17 T 14-09-2016 IPR008621 Cbb3-type cytochrome oxidase component AY555_RS08380 0963a2a95a7af4b6ee9bf326ef959eb9 184 Pfam PF10691 Protein of unknown function (DUF2497) 107 178 3.5E-25 T 14-09-2016 IPR019632 Protein of unknown function DUF2497 AY555_RS03195 8c2eca2b601dc28f077a6e817ed7faea 149 Pfam PF11351 Holin of 3TMs, for gene-transfer release 32 105 8.3E-12 T 14-09-2016 IPR021497 Holin of 3TMs, for gene-transfer release AY555_RS06490 86fd1634dbfdc9b2f3b9d4b6e33b1fb6 85 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 10 84 2.5E-18 T 14-09-2016 IPR019289 Bacteriophage tail protein Gp41, putative AY555_RS03780 b460ab49eb8d464c6749ccf46b1ae884 467 Gene3D G3DSA:1.25.40.10 221 427 1.6E-6 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS04065 3d72ebba200318214b041ea7dfcb6b6a 146 Pfam PF06170 Protein of unknown function (DUF983) 53 135 9.6E-23 T 14-09-2016 IPR009325 Protein of unknown function DUF983 AY555_RS03485 7f9ded0a3d9e4181ef15421f7ba26bcc 803 Pfam PF13779 Domain of unknown function (DUF4175) 24 801 5.5E-142 T 14-09-2016 IPR012683 Conserved hypothetical protein CHP02302, transmembrane AY555_RS01780 2c39a875abd0f940f3889c124f27f9aa 276 Gene3D G3DSA:1.10.620.20 3 177 1.1E-18 T 14-09-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 AY555_RS01780 2c39a875abd0f940f3889c124f27f9aa 276 SUPERFAMILY SSF47240 2 243 2.47E-41 T 14-09-2016 IPR009078 Ferritin-like superfamily AY555_RS05670 114470ffd2f0fe215424147c816f025f 146 Pfam PF07486 Cell Wall Hydrolase 29 142 5.6E-21 T 14-09-2016 IPR011105 Cell wall hydrolase, SleB GO:0016787 AY555_RS06875 4547839ab76dc2b97255d88c5897e8ed 232 Pfam PF13763 Domain of unknown function (DUF4167) 1 47 2.6E-20 T 14-09-2016 IPR025430 Domain of unknown function DUF4167 AY555_RS10100 f20b5d56b7a136c2e9ebfe8bd902455d 95 SUPERFAMILY SSF48452 29 94 9.11E-5 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AY555_RS09185 48e36f174907d3cad10e03047933f878 142 Pfam PF04241 Protein of unknown function (DUF423) 18 100 3.8E-13 T 14-09-2016 IPR006696 Protein of unknown function DUF423 AY555_RS06590 557b7af20948e17c5e6cf55da38e0053 132 SUPERFAMILY SSF46689 51 127 2.41E-7 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AY555_RS06590 557b7af20948e17c5e6cf55da38e0053 132 SUPERFAMILY SSF46689 7 21 2.41E-7 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AY555_RS00085 4e965a2e3507152455f583a9edd55a3e 115 Pfam PF04347 Flagellar biosynthesis protein, FliO 34 77 1.9E-5 T 14-09-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 AY555_RS07015 7081e8a7b428882bd89234c3fd7e6455 266 SUPERFAMILY SSF110710 17 253 5.75E-41 T 14-09-2016 AY555_RS07015 7081e8a7b428882bd89234c3fd7e6455 266 Pfam PF02522 Aminoglycoside 3-N-acetyltransferase 28 250 2.1E-30 T 14-09-2016 IPR003679 Aminoglycoside N(3)-acetyltransferase GO:0046353|GO:0046677 AY555_RS00185 7833e38d2eb5e11ac6adb162727af21a 109 Pfam PF10135 Rod binding protein 53 99 8.8E-10 T 14-09-2016 IPR019301 Flagellar protein FlgJ, N-terminal AY555_RS07570 c14dcd763d7c9729f2e348c2c57756aa 259 SUPERFAMILY SSF47188 25 153 5.23E-5 T 14-09-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AY555_RS09315 78f953734a960111f1165d453b90c97b 173 Pfam PF06776 Invasion associated locus B (IalB) protein 38 168 2.0E-30 T 14-09-2016 IPR010642 Invasion protein B AY555_RS02765 cdb4182836d3e653056e7183698a3ff7 100 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 8 89 1.0E-12 T 14-09-2016 IPR019289 Bacteriophage tail protein Gp41, putative AY555_RS00665 45047ff0702492bea1523d7b60effed8 194 Pfam PF09361 Phasin protein 97 184 2.7E-15 T 14-09-2016 IPR018968 Phasin AY555_RS09355 e8ba249ad3c66430ced96135d3f493fe 339 Pfam PF02108 Flagellar assembly protein FliH 90 214 8.8E-11 T 14-09-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE AY555_RS08570 f77f9117f479420a3769d9f2e31db6f9 131 Pfam PF13773 Domain of unknown function (DUF4170) 6 67 6.9E-8 T 14-09-2016 IPR025226 Protein of unknown function DUF4170 AY555_RS06550 c2651e62cfdf8dbc10c668f5eedc0d85 63 Gene3D G3DSA:3.40.5.10 28 55 2.9E-4 T 14-09-2016 IPR020070 Ribosomal protein L9, N-terminal AY555_RS05460 0b1fb77142f3863171caf6803d32b6a1 132 Gene3D G3DSA:3.40.50.620 49 112 8.2E-4 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AY555_RS04475 0066b6441612f867e63ca070d7d1631c 359 Pfam PF04443 Acyl-protein synthetase, LuxE 9 358 6.6E-44 T 14-09-2016 IPR007534 Acyl-protein synthetase, LuxE GO:0008218|GO:0047474 MetaCyc: PWY-7723|UniPathway: UPA00569 AY555_RS00325 2b7c7af7f9a6ba4bf09d0ab8bf1a438b 405 Pfam PF10087 Uncharacterized protein conserved in bacteria (DUF2325) 306 398 3.7E-20 T 14-09-2016 IPR016772 Uncharacterised conserved protein UCP020408 AY555_RS00555 0d814ebb8f137b30e38ab181ed35aa94 231 Pfam PF09976 Tetratricopeptide repeat-like domain 29 200 8.9E-15 T 14-09-2016 IPR018704 Tetratricopeptide repeat-like domain AY555_RS05255 d6b9484fe15a708ddd83bc45f2c73d4a 170 Pfam PF05751 FixH 15 167 2.8E-27 T 14-09-2016 IPR008620 Nitrogen fixation protein FixH AY555_RS03355 d6c33b32fec865987f20a9d3635d6cc7 784 SUPERFAMILY SSF53448 35 252 5.44E-6 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AY555_RS05720 7632a2ebd3d1e4efb57e7fb4e1122418 102 Pfam PF13467 Ribbon-helix-helix domain 21 86 3.5E-26 T 14-09-2016 IPR027373 Ribbon-helix-helix domain