locus-tag class description DLK00_RS00015 PF03459 TOBE domain DLK00_RS00020 PF04358 DsrC like protein DLK00_RS00025 PF01171 PP-loop family DLK00_RS00030 PF03882 MukF winged-helix domain DLK00_RS00030 PF17193 MukF C-terminal domain DLK00_RS00030 PF17192 MukF middle domain DLK00_RS00035 PF04288 MukE-like family DLK00_RS00040 PF04310 MukB N-terminal DLK00_RS00040 PF16330 MukB hinge domain DLK00_RS00060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DLK00_RS00060 PF00512 His Kinase A (phospho-acceptor) domain DLK00_RS00065 PF00486 Transcriptional regulatory protein, C terminal DLK00_RS00065 PF00072 Response regulator receiver domain DLK00_RS00070 PF00005 ABC transporter DLK00_RS00085 PF12849 PBP superfamily domain DLK00_RS00090 PF00210 Ferritin-like domain DLK00_RS00095 PF00210 Ferritin-like domain DLK00_RS00110 PF04715 Anthranilate synthase component I, N terminal region DLK00_RS00110 PF00425 chorismate binding enzyme DLK00_RS00115 PF00117 Glutamine amidotransferase class-I DLK00_RS00120 PF14552 Tautomerase enzyme DLK00_RS00125 PF02885 Glycosyl transferase family, helical bundle domain DLK00_RS00125 PF00591 Glycosyl transferase family, a/b domain DLK00_RS00130 PF00218 Indole-3-glycerol phosphate synthase DLK00_RS00130 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DLK00_RS00135 PF01455 HupF/HypC family DLK00_RS00150 PF04266 ASCH domain DLK00_RS00160 PF06414 Zeta toxin DLK00_RS00165 PF04364 DNA polymerase III chi subunit, HolC DLK00_RS00180 PF13276 HTH-like domain DLK00_RS00180 PF00665 Integrase core domain DLK00_RS00180 PF13333 Integrase core domain DLK00_RS00190 PF00206 Lyase DLK00_RS00190 PF10415 Fumarase C C-terminus DLK00_RS00195 PF16036 Chalcone isomerase-like DLK00_RS00200 PF02811 PHP domain DLK00_RS00205 PF01180 Dihydroorotate dehydrogenase DLK00_RS00210 PF03406 Phage tail fibre repeat DLK00_RS00225 PF03592 Terminase small subunit DLK00_RS00235 PF10828 Protein of unknown function (DUF2570) DLK00_RS00245 PF05106 Phage holin family (Lysis protein S) DLK00_RS00345 PF08346 AntA/AntB antirepressor DLK00_RS00345 PF10548 P22AR C-terminal domain DLK00_RS00350 PF00589 Phage integrase family DLK00_RS00360 PF13545 Crp-like helix-turn-helix domain DLK00_RS00360 PF00027 Cyclic nucleotide-binding domain DLK00_RS00365 PF00582 Universal stress protein family DLK00_RS00370 PF10670 Domain of unknown function (DUF4198) DLK00_RS00375 PF00551 Formyl transferase DLK00_RS00380 PF00586 AIR synthase related protein, N-terminal domain DLK00_RS00380 PF02769 AIR synthase related protein, C-terminal domain DLK00_RS00385 PF00106 short chain dehydrogenase DLK00_RS00405 PF04073 Aminoacyl-tRNA editing domain DLK00_RS00410 PF00313 'Cold-shock' DNA-binding domain DLK00_RS00415 PF03701 Uncharacterised protein family (UPF0181) DLK00_RS00420 PF00849 RNA pseudouridylate synthase DLK00_RS00425 PF04287 tRNA pseudouridine synthase C DLK00_RS00430 PF02926 THUMP domain DLK00_RS00430 PF02568 Thiamine biosynthesis protein (ThiI) DLK00_RS00435 PF02609 Exonuclease VII small subunit DLK00_RS00440 PF00348 Polyprenyl synthetase DLK00_RS00450 PF04386 Stringent starvation protein B DLK00_RS00455 PF02798 Glutathione S-transferase, N-terminal domain DLK00_RS00455 PF00043 Glutathione S-transferase, C-terminal domain DLK00_RS00460 PF00380 Ribosomal protein S9/S16 DLK00_RS00465 PF00572 Ribosomal protein L13 DLK00_RS00470 PF02219 Methylenetetrahydrofolate reductase DLK00_RS00480 PF05166 YcgL domain DLK00_RS00485 PF01227 GTP cyclohydrolase I DLK00_RS00490 PF03453 MoeA N-terminal region (domain I and II) DLK00_RS00490 PF03454 MoeA C-terminal region (domain IV) DLK00_RS00490 PF00994 Probable molybdopterin binding domain DLK00_RS00495 PF00899 ThiF family DLK00_RS00500 PF04269 Protein of unknown function, DUF440 DLK00_RS00505 PF03956 Lysine exporter LysO DLK00_RS00510 PF08534 Redoxin DLK00_RS00515 PF02683 Cytochrome C biogenesis protein transmembrane region DLK00_RS00535 PF04542 Sigma-70 region 2 DLK00_RS00535 PF08281 Sigma-70, region 4 DLK00_RS00550 PF02321 Outer membrane efflux protein DLK00_RS00570 PF00809 Pterin binding enzyme DLK00_RS00575 PF00004 ATPase family associated with various cellular activities (AAA) DLK00_RS00575 PF17862 AAA+ lid domain DLK00_RS00575 PF06480 FtsH Extracellular DLK00_RS00575 PF01434 Peptidase family M41 DLK00_RS00580 PF01728 FtsJ-like methyltransferase DLK00_RS00595 PF13333 Integrase core domain DLK00_RS00595 PF00665 Integrase core domain DLK00_RS00595 PF13276 HTH-like domain DLK00_RS00605 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family DLK00_RS00610 PF00593 TonB dependent receptor DLK00_RS00615 PF00665 Integrase core domain DLK00_RS00615 PF13333 Integrase core domain DLK00_RS00615 PF13276 HTH-like domain DLK00_RS00625 PF00005 ABC transporter DLK00_RS00625 PF06472 ABC transporter transmembrane region 2 DLK00_RS00630 PF00312 Ribosomal protein S15 DLK00_RS00645 PF07977 FabA-like domain DLK00_RS00660 PF13538 UvrD-like helicase C-terminal domain DLK00_RS00665 PF13361 UvrD-like helicase C-terminal domain DLK00_RS00665 PF00580 UvrD/REP helicase N-terminal domain DLK00_RS00665 PF12705 PD-(D/E)XK nuclease superfamily DLK00_RS00670 PF00453 Ribosomal protein L20 DLK00_RS00675 PF01632 Ribosomal protein L35 DLK00_RS00680 PF00707 Translation initiation factor IF-3, C-terminal domain DLK00_RS00680 PF05198 Translation initiation factor IF-3, N-terminal domain DLK00_RS00685 PF01263 Aldose 1-epimerase DLK00_RS00690 PF16347 Domain of unknown function (DUF4976) DLK00_RS00695 PF02190 ATP-dependent protease La (LON) substrate-binding domain DLK00_RS00695 PF00004 ATPase family associated with various cellular activities (AAA) DLK00_RS00695 PF05362 Lon protease (S16) C-terminal proteolytic domain DLK00_RS00715 PF02146 Sir2 family DLK00_RS00720 PF01580 FtsK/SpoIIIE family DLK00_RS00720 PF09397 Ftsk gamma domain DLK00_RS00720 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DLK00_RS00720 PF17854 FtsK alpha domain DLK00_RS00730 PF02146 Sir2 family DLK00_RS00735 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) DLK00_RS00745 PF00877 NlpC/P60 family DLK00_RS00750 PF00216 Bacterial DNA-binding protein DLK00_RS00760 PF01409 tRNA synthetases class II core domain (F) DLK00_RS00760 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DLK00_RS00770 PF00111 2Fe-2S iron-sulfur cluster binding domain DLK00_RS00780 PF01810 LysE type translocator DLK00_RS00795 PF01029 NusB family DLK00_RS00800 PF00885 6,7-dimethyl-8-ribityllumazine synthase DLK00_RS00805 PF00152 tRNA synthetases class II (D, K and N) DLK00_RS00805 PF01336 OB-fold nucleic acid binding domain DLK00_RS00810 PF00484 Carbonic anhydrase DLK00_RS00815 PF12848 ABC transporter DLK00_RS00815 PF16326 ABC transporter C-terminal domain DLK00_RS00815 PF00005 ABC transporter DLK00_RS00820 PF12848 ABC transporter DLK00_RS00820 PF16326 ABC transporter C-terminal domain DLK00_RS00820 PF00005 ABC transporter DLK00_RS00825 PF13286 Phosphohydrolase-associated domain DLK00_RS00825 PF01966 HD domain DLK00_RS00830 PF04172 LrgB-like family DLK00_RS00835 PF03788 LrgA family DLK00_RS00840 PF00565 Staphylococcal nuclease homologue DLK00_RS00845 PF00266 Aminotransferase class-V DLK00_RS00850 PF02657 Fe-S metabolism associated domain DLK00_RS00855 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) DLK00_RS00860 PF14489 QueF-like protein DLK00_RS00860 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term DLK00_RS00865 PF02153 Prephenate dehydrogenase DLK00_RS00865 PF01817 Chorismate mutase type II DLK00_RS00870 PF09157 Pseudouridine synthase II TruB, C-terminal DLK00_RS00870 PF16198 tRNA pseudouridylate synthase B C-terminal domain DLK00_RS00870 PF01509 TruB family pseudouridylate synthase (N terminal domain) DLK00_RS00875 PF02033 Ribosome-binding factor A DLK00_RS00885 PF01420 Type I restriction modification DNA specificity domain DLK00_RS00905 PF11867 Domain of unknown function (DUF3387) DLK00_RS00905 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DLK00_RS00905 PF18766 SWI2/SNF2 ATPase DLK00_RS00910 PF04760 Translation initiation factor IF-2, N-terminal region DLK00_RS00910 PF08364 Bacterial translation initiation factor IF-2 associated region DLK00_RS00910 PF11987 Translation-initiation factor 2 DLK00_RS00910 PF00009 Elongation factor Tu GTP binding domain DLK00_RS00920 PF17384 RimP C-terminal SH3 domain DLK00_RS00920 PF02576 RimP N-terminal domain DLK00_RS00945 PF05930 Prophage CP4-57 regulatory protein (AlpA) DLK00_RS01015 PF10609 NUBPL iron-transfer P-loop NTPase DLK00_RS01020 PF09334 tRNA synthetases class I (M) DLK00_RS01020 PF08264 Anticodon-binding domain of tRNA DLK00_RS01020 PF01588 Putative tRNA binding domain DLK00_RS01030 PF12706 Beta-lactamase superfamily domain DLK00_RS01030 PF16123 Hydroxyacylglutathione hydrolase C-terminus DLK00_RS01035 PF13649 Methyltransferase domain DLK00_RS01080 PF00561 alpha/beta hydrolase fold DLK00_RS01085 PF02698 DUF218 domain DLK00_RS01100 PF00595 PDZ domain DLK00_RS01105 PF00271 Helicase conserved C-terminal domain DLK00_RS01105 PF02559 CarD-like/TRCF domain DLK00_RS01105 PF03461 TRCF domain DLK00_RS01105 PF17757 UvrB interaction domain DLK00_RS01105 PF00270 DEAD/DEAH box helicase DLK00_RS01120 PF04247 Invasion gene expression up-regulator, SirB DLK00_RS01125 PF12848 ABC transporter DLK00_RS01125 PF00005 ABC transporter DLK00_RS01130 PF01381 Helix-turn-helix DLK00_RS01135 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB DLK00_RS01140 PF06226 Protein of unknown function (DUF1007) DLK00_RS01145 PF03824 High-affinity nickel-transport protein DLK00_RS01165 PF03949 Malic enzyme, NAD binding domain DLK00_RS01165 PF00390 Malic enzyme, N-terminal domain DLK00_RS01165 PF01515 Phosphate acetyl/butaryl transferase DLK00_RS01170 PF08942 Domain of unknown function (DUF1919) DLK00_RS01175 PF00849 RNA pseudouridylate synthase DLK00_RS01175 PF01479 S4 domain DLK00_RS01180 PF07690 Major Facilitator Superfamily DLK00_RS01190 PF03458 UPF0126 domain DLK00_RS01195 PF00171 Aldehyde dehydrogenase family DLK00_RS01210 PF06097 Bacterial protein of unknown function (DUF945) DLK00_RS01215 PF02142 MGS-like domain DLK00_RS01220 PF00456 Transketolase, thiamine diphosphate binding domain DLK00_RS01220 PF17831 Pyruvate dehydrogenase E1 component middle domain DLK00_RS01225 PF00364 Biotin-requiring enzyme DLK00_RS01225 PF02817 e3 binding domain DLK00_RS01225 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DLK00_RS01230 PF07992 Pyridine nucleotide-disulphide oxidoreductase DLK00_RS01230 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DLK00_RS01235 PF00156 Phosphoribosyl transferase domain DLK00_RS01240 PF12170 DNA polymerase III tau subunit V interacting with alpha DLK00_RS01240 PF12169 DNA polymerase III subunits gamma and tau domain III DLK00_RS01250 PF00860 Permease family DLK00_RS01255 PF00308 Bacterial dnaA protein DLK00_RS01260 PF01253 Translation initiation factor SUI1 DLK00_RS01270 PF18073 Rubredoxin metal binding domain DLK00_RS01275 PF06305 Lipopolysaccharide assembly protein A domain DLK00_RS01280 PF00216 Bacterial DNA-binding protein DLK00_RS01285 PF00575 S1 RNA binding domain DLK00_RS01290 PF02224 Cytidylate kinase DLK00_RS01295 PF01680 SOR/SNZ family DLK00_RS01300 PF01174 SNO glutamine amidotransferase family DLK00_RS01305 PF09330 D-lactate dehydrogenase, membrane binding DLK00_RS01305 PF01565 FAD binding domain DLK00_RS01320 PF00877 NlpC/P60 family DLK00_RS01325 PF01523 Putative modulator of DNA gyrase DLK00_RS01330 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DLK00_RS01340 PF02021 Uncharacterised protein family UPF0102 DLK00_RS01345 PF13580 SIS domain DLK00_RS01350 PF04972 BON domain DLK00_RS01365 PF00268 Ribonucleotide reductase, small chain DLK00_RS01370 PF02817 e3 binding domain DLK00_RS01370 PF00364 Biotin-requiring enzyme DLK00_RS01370 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DLK00_RS01380 PF00753 Metallo-beta-lactamase superfamily DLK00_RS01390 PF05951 Bacterial protein of unknown function (DUF882) DLK00_RS01395 PF03734 L,D-transpeptidase catalytic domain DLK00_RS01420 PF02391 MoaE protein DLK00_RS01425 PF02597 ThiS family DLK00_RS01430 PF01967 MoaC family DLK00_RS01435 PF06463 Molybdenum Cofactor Synthesis C DLK00_RS01435 PF04055 Radical SAM superfamily DLK00_RS01440 PF01814 Hemerythrin HHE cation binding domain DLK00_RS01440 PF04405 Domain of Unknown function (DUF542) DLK00_RS01450 PF00571 CBS domain DLK00_RS01450 PF01380 SIS domain DLK00_RS01470 PF18254 HMW1 domain 2 DLK00_RS01470 PF18071 HMW1C N-terminal DLK00_RS01490 PF08765 Mor transcription activator family DLK00_RS01495 PF09836 Putative DNA-binding domain DLK00_RS01510 PF07681 DoxX DLK00_RS01515 PF01865 Protein of unknown function DUF47 DLK00_RS01520 PF01384 Phosphate transporter family DLK00_RS01525 PF08239 Bacterial SH3 domain DLK00_RS01535 PF03550 Outer membrane lipoprotein LolB DLK00_RS01540 PF08544 GHMP kinases C terminal DLK00_RS01540 PF00288 GHMP kinases N terminal domain DLK00_RS01545 PF14572 Phosphoribosyl synthetase-associated domain DLK00_RS01545 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DLK00_RS01550 PF01479 S4 domain DLK00_RS01550 PF00579 tRNA synthetases class I (W and Y) DLK00_RS01555 PF03749 Sugar fermentation stimulation protein RE domain DLK00_RS01555 PF17746 SfsA N-terminal OB domain DLK00_RS01560 PF01554 MatE DLK00_RS01585 PF00731 AIR carboxylase DLK00_RS01590 PF02222 ATP-grasp domain DLK00_RS01590 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DLK00_RS01595 PF00155 Aminotransferase class I and II DLK00_RS01600 PF00005 ABC transporter DLK00_RS01620 PF10670 Domain of unknown function (DUF4198) DLK00_RS01635 PF14256 YwiC-like protein DLK00_RS01640 PF01042 Endoribonuclease L-PSP DLK00_RS01645 PF06295 Protein of unknown function (DUF1043) DLK00_RS01655 PF01386 Ribosomal L25p family DLK00_RS01680 PF00696 Amino acid kinase family DLK00_RS01685 PF00709 Adenylosuccinate synthetase DLK00_RS01690 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal DLK00_RS01690 PF14602 Hexapeptide repeat of succinyl-transferase DLK00_RS01690 PF00132 Bacterial transferase hexapeptide (six repeats) DLK00_RS01695 PF00356 Bacterial regulatory proteins, lacI family DLK00_RS01705 PF04317 YcjX-like family, DUF463 DLK00_RS01710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DLK00_RS01720 PF00528 Binding-protein-dependent transport system inner membrane component DLK00_RS01720 PF12911 N-terminal TM domain of oligopeptide transport permease C DLK00_RS01725 PF00005 ABC transporter DLK00_RS01725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DLK00_RS01730 PF00005 ABC transporter DLK00_RS01740 PF01416 tRNA pseudouridine synthase DLK00_RS01745 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain DLK00_RS01755 PF02652 L-lactate permease DLK00_RS01765 PF01048 Phosphorylase superfamily DLK00_RS01780 PF13098 Thioredoxin-like domain DLK00_RS01780 PF10411 Disulfide bond isomerase protein N-terminus DLK00_RS01785 PF03462 PCRF domain DLK00_RS01785 PF00472 RF-1 domain DLK00_RS01795 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DLK00_RS01795 PF00056 lactate/malate dehydrogenase, NAD binding domain DLK00_RS01800 PF01316 Arginine repressor, DNA binding domain DLK00_RS01800 PF02863 Arginine repressor, C-terminal domain DLK00_RS01805 PF08338 Domain of unknown function (DUF1731) DLK00_RS01805 PF01370 NAD dependent epimerase/dehydratase family DLK00_RS01810 PF00156 Phosphoribosyl transferase domain DLK00_RS01815 PF02674 Colicin V production protein DLK00_RS01820 PF04217 Protein of unknown function, DUF412 DLK00_RS01825 PF00871 Acetokinase family DLK00_RS01830 PF01515 Phosphate acetyl/butaryl transferase DLK00_RS01830 PF07085 DRTGG domain DLK00_RS01835 PF01713 Smr domain DLK00_RS01845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLK00_RS01845 PF03466 LysR substrate binding domain DLK00_RS01850 PF01479 S4 domain DLK00_RS01850 PF00849 RNA pseudouridylate synthase DLK00_RS01855 PF01300 Telomere recombination DLK00_RS01860 PF02629 CoA binding domain DLK00_RS01860 PF00549 CoA-ligase DLK00_RS01865 PF08442 ATP-grasp domain DLK00_RS01865 PF00549 CoA-ligase DLK00_RS01870 PF01728 FtsJ-like methyltransferase DLK00_RS01870 PF18125 RlmM ferredoxin-like domain DLK00_RS01875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLK00_RS01875 PF03466 LysR substrate binding domain DLK00_RS01880 PF01063 Amino-transferase class IV DLK00_RS01890 PF06508 Queuosine biosynthesis protein QueC DLK00_RS01895 PF01242 6-pyruvoyl tetrahydropterin synthase DLK00_RS01900 PF04055 Radical SAM superfamily DLK00_RS01910 PF00580 UvrD/REP helicase N-terminal domain DLK00_RS01910 PF13361 UvrD-like helicase C-terminal domain DLK00_RS01920 PF12911 N-terminal TM domain of oligopeptide transport permease C DLK00_RS01920 PF00528 Binding-protein-dependent transport system inner membrane component DLK00_RS01930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DLK00_RS01930 PF00005 ABC transporter DLK00_RS01940 PF13580 SIS domain DLK00_RS01945 PF00005 ABC transporter DLK00_RS01950 PF00497 Bacterial extracellular solute-binding proteins, family 3 DLK00_RS01955 PF00528 Binding-protein-dependent transport system inner membrane component DLK00_RS01960 PF00528 Binding-protein-dependent transport system inner membrane component DLK00_RS01970 PF02462 Opacity family porin protein DLK00_RS01975 PF17283 SprT-like zinc ribbon domain DLK00_RS01975 PF10263 SprT-like family DLK00_RS01980 PF02773 S-adenosylmethionine synthetase, C-terminal domain DLK00_RS01980 PF00438 S-adenosylmethionine synthetase, N-terminal domain DLK00_RS01980 PF02772 S-adenosylmethionine synthetase, central domain DLK00_RS01985 PF00117 Glutamine amidotransferase class-I DLK00_RS01995 PF01063 Amino-transferase class IV DLK00_RS02000 PF04363 Protein of unknown function (DUF496) DLK00_RS02005 PF00266 Aminotransferase class-V DLK00_RS02010 PF00155 Aminotransferase class I and II DLK00_RS02015 PF00462 Glutaredoxin DLK00_RS02020 PF01389 OmpA-like transmembrane domain DLK00_RS02020 PF00691 OmpA family DLK00_RS02025 PF02913 FAD linked oxidases, C-terminal domain DLK00_RS02025 PF13183 4Fe-4S dicluster domain DLK00_RS02025 PF01565 FAD binding domain DLK00_RS02035 PF04480 Protein of unknown function (DUF559) DLK00_RS02045 PF03061 Thioesterase superfamily DLK00_RS02050 PF00762 Ferrochelatase DLK00_RS02060 PF07992 Pyridine nucleotide-disulphide oxidoreductase DLK00_RS02065 PF00005 ABC transporter DLK00_RS02065 PF00664 ABC transporter transmembrane region DLK00_RS02070 PF00664 ABC transporter transmembrane region DLK00_RS02070 PF00005 ABC transporter DLK00_RS02085 PF00375 Sodium:dicarboxylate symporter family DLK00_RS02095 PF00156 Phosphoribosyl transferase domain DLK00_RS02100 PF01523 Putative modulator of DNA gyrase DLK00_RS02105 PF04751 Protein of unknown function (DUF615) DLK00_RS02110 PF06835 Lipopolysaccharide-assembly, LptC-related DLK00_RS02115 PF03968 OstA-like protein DLK00_RS02120 PF12399 Branched-chain amino acid ATP-binding cassette transporter DLK00_RS02120 PF00005 ABC transporter DLK00_RS02125 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DLK00_RS02130 PF03668 P-loop ATPase protein family DLK00_RS02135 PF01817 Chorismate mutase type II DLK00_RS02135 PF00800 Prephenate dehydratase DLK00_RS02140 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DLK00_RS02145 PF12327 FtsZ family, C-terminal domain DLK00_RS02145 PF00091 Tubulin/FtsZ family, GTPase domain DLK00_RS02150 PF02491 SHS2 domain inserted in FTSA DLK00_RS02160 PF01820 D-ala D-ala ligase N-terminus DLK00_RS02160 PF07478 D-ala D-ala ligase C-terminus DLK00_RS02170 PF03033 Glycosyltransferase family 28 N-terminal domain DLK00_RS02170 PF04101 Glycosyltransferase family 28 C-terminal domain DLK00_RS02175 PF01098 Cell cycle protein DLK00_RS02180 PF08245 Mur ligase middle domain DLK00_RS02180 PF02875 Mur ligase family, glutamate ligase domain DLK00_RS02195 PF01225 Mur ligase family, catalytic domain DLK00_RS02195 PF02875 Mur ligase family, glutamate ligase domain DLK00_RS02195 PF08245 Mur ligase middle domain DLK00_RS02200 PF03717 Penicillin-binding Protein dimerisation domain DLK00_RS02200 PF00905 Penicillin binding protein transpeptidase domain DLK00_RS02205 PF04999 Cell division protein FtsL DLK00_RS02210 PF01795 MraW methylase family DLK00_RS02215 PF02381 MraZ protein, putative antitoxin-like DLK00_RS02220 PF02554 Carbon starvation protein CstA DLK00_RS02225 PF10571 Uncharacterised protein family UPF0547 DLK00_RS02230 PF00923 Transaldolase/Fructose-6-phosphate aldolase DLK00_RS02235 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DLK00_RS02240 PF00528 Binding-protein-dependent transport system inner membrane component DLK00_RS02250 PF00005 ABC transporter DLK00_RS02250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DLK00_RS02255 PF00005 ABC transporter DLK00_RS02255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DLK00_RS02260 PF04393 Protein of unknown function (DUF535) DLK00_RS02265 PF01926 50S ribosome-binding GTPase DLK00_RS02275 PF01791 DeoC/LacD family aldolase DLK00_RS02295 PF10122 Mu-like prophage protein Com DLK00_RS02430 PF03237 Terminase-like family DLK00_RS02435 PF11985 Protein of unknown function (DUF3486) DLK00_RS02520 PF13401 AAA domain DLK00_RS02520 PF01471 Putative peptidoglycan binding domain DLK00_RS02530 PF07352 Bacteriophage Mu Gam like protein DLK00_RS02555 PF06252 Protein of unknown function (DUF1018) DLK00_RS02560 PF08765 Mor transcription activator family DLK00_RS02565 PF04575 Protein of unknown function (DUF560) DLK00_RS02575 PF00578 AhpC/TSA family DLK00_RS02580 PF01370 NAD dependent epimerase/dehydratase family DLK00_RS02590 PF07690 Major Facilitator Superfamily DLK00_RS02595 PF00291 Pyridoxal-phosphate dependent enzyme DLK00_RS02605 PF04354 ZipA, C-terminal FtsZ-binding domain DLK00_RS02610 PF00533 BRCA1 C Terminus (BRCT) domain DLK00_RS02610 PF01653 NAD-dependent DNA ligase adenylation domain DLK00_RS02610 PF12826 Helix-hairpin-helix motif DLK00_RS02610 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DLK00_RS02610 PF03120 NAD-dependent DNA ligase OB-fold domain DLK00_RS02625 PF03918 Cytochrome C biogenesis protein DLK00_RS02635 PF08534 Redoxin DLK00_RS02640 PF01578 Cytochrome C assembly protein DLK00_RS02640 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DLK00_RS02645 PF03100 CcmE DLK00_RS02650 PF04995 Heme exporter protein D (CcmD) DLK00_RS02655 PF01578 Cytochrome C assembly protein DLK00_RS02660 PF03379 CcmB protein DLK00_RS02665 PF00005 ABC transporter DLK00_RS02670 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DLK00_RS02670 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DLK00_RS02680 PF02405 Permease MlaE DLK00_RS02685 PF02470 MlaD protein DLK00_RS02690 PF05494 MlaC protein DLK00_RS02695 PF13466 STAS domain DLK00_RS02700 PF01722 BolA-like protein DLK00_RS02705 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DLK00_RS02710 PF00497 Bacterial extracellular solute-binding proteins, family 3 DLK00_RS02715 PF00528 Binding-protein-dependent transport system inner membrane component DLK00_RS02720 PF00005 ABC transporter DLK00_RS02725 PF04973 Nicotinamide mononucleotide transporter DLK00_RS02740 PF01654 Cytochrome bd terminal oxidase subunit I DLK00_RS02745 PF02322 Cytochrome bd terminal oxidase subunit II DLK00_RS02750 PF04284 Protein of unknown function (DUF441) DLK00_RS02755 PF04241 Protein of unknown function (DUF423) DLK00_RS02760 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DLK00_RS02760 PF00271 Helicase conserved C-terminal domain DLK00_RS02760 PF04408 Helicase associated domain (HA2) DLK00_RS02760 PF11898 Domain of unknown function (DUF3418) DLK00_RS02760 PF00270 DEAD/DEAH box helicase DLK00_RS02775 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DLK00_RS02775 PF04408 Helicase associated domain (HA2) DLK00_RS02775 PF00270 DEAD/DEAH box helicase DLK00_RS02775 PF11898 Domain of unknown function (DUF3418) DLK00_RS02775 PF00271 Helicase conserved C-terminal domain DLK00_RS02780 PF02335 Cytochrome c552 DLK00_RS02800 PF00696 Amino acid kinase family DLK00_RS02805 PF00884 Sulfatase DLK00_RS02810 PF07977 FabA-like domain DLK00_RS02815 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DLK00_RS02815 PF00132 Bacterial transferase hexapeptide (six repeats) DLK00_RS02825 PF01351 Ribonuclease HII DLK00_RS02835 PF04851 Type III restriction enzyme, res subunit DLK00_RS02840 PF02627 Carboxymuconolactone decarboxylase family DLK00_RS02845 PF02311 AraC-like ligand binding domain DLK00_RS02845 PF12833 Helix-turn-helix domain DLK00_RS02850 PF00664 ABC transporter transmembrane region DLK00_RS02850 PF00005 ABC transporter DLK00_RS02855 PF00403 Heavy-metal-associated domain DLK00_RS02875 PF12800 4Fe-4S binding domain DLK00_RS02875 PF13247 4Fe-4S dicluster domain DLK00_RS02880 PF04976 DMSO reductase anchor subunit (DmsC) DLK00_RS02885 PF02613 Nitrate reductase delta subunit DLK00_RS02890 PF12838 4Fe-4S dicluster domain DLK00_RS02890 PF00037 4Fe-4S binding domain DLK00_RS02895 PF02310 B12 binding domain DLK00_RS02895 PF02965 Vitamin B12 dependent methionine synthase, activation domain DLK00_RS02895 PF02607 B12 binding domain DLK00_RS02905 PF13173 AAA domain DLK00_RS02905 PF13635 Domain of unknown function (DUF4143) DLK00_RS02915 PF02325 YGGT family DLK00_RS02920 PF01544 CorA-like Mg2+ transporter protein DLK00_RS02925 PF04461 Protein of unknown function (DUF520) DLK00_RS02930 PF18429 Domain of unknown function (DUF5609) DLK00_RS02940 PF00456 Transketolase, thiamine diphosphate binding domain DLK00_RS02940 PF02780 Transketolase, C-terminal domain DLK00_RS02940 PF02779 Transketolase, pyrimidine binding domain DLK00_RS02955 PF00528 Binding-protein-dependent transport system inner membrane component DLK00_RS02975 PF01252 Signal peptidase (SPase) II DLK00_RS02980 PF00884 Sulfatase DLK00_RS02990 PF13276 HTH-like domain DLK00_RS02990 PF00665 Integrase core domain DLK00_RS02990 PF13333 Integrase core domain DLK00_RS02995 PF13145 PPIC-type PPIASE domain DLK00_RS03000 PF10396 GTP-binding protein TrmE N-terminus DLK00_RS03000 PF12631 MnmE helical domain DLK00_RS03000 PF01926 50S ribosome-binding GTPase DLK00_RS03005 PF02096 60Kd inner membrane protein DLK00_RS03005 PF14849 YidC periplasmic domain DLK00_RS03010 PF01809 Putative membrane protein insertion efficiency factor DLK00_RS03015 PF00825 Ribonuclease P DLK00_RS03020 PF00468 Ribosomal protein L34 DLK00_RS03035 PF07715 TonB-dependent Receptor Plug Domain DLK00_RS03035 PF00593 TonB dependent receptor DLK00_RS03040 PF00308 Bacterial dnaA protein DLK00_RS03040 PF11638 DnaA N-terminal domain DLK00_RS03040 PF08299 Bacterial dnaA protein helix-turn-helix DLK00_RS03045 PF02768 DNA polymerase III beta subunit, C-terminal domain DLK00_RS03045 PF00712 DNA polymerase III beta subunit, N-terminal domain DLK00_RS03045 PF02767 DNA polymerase III beta subunit, central domain DLK00_RS03050 PF02463 RecF/RecN/SMC N terminal domain DLK00_RS03055 PF03212 Pertactin DLK00_RS03055 PF02395 Immunoglobulin A1 protease DLK00_RS03055 PF03797 Autotransporter beta-domain DLK00_RS03060 PF00694 Aconitase C-terminal domain DLK00_RS03075 PF08502 LeuA allosteric (dimerisation) domain DLK00_RS03075 PF00682 HMGL-like DLK00_RS03080 PF02481 DNA recombination-mediator protein A DLK00_RS03080 PF17782 DprA winged helix domain DLK00_RS03085 PF03883 Peroxide stress protein YaaA DLK00_RS03095 PF00365 Phosphofructokinase DLK00_RS03100 PF01668 SmpB protein DLK00_RS03105 PF02954 Bacterial regulatory protein, Fis family DLK00_RS03110 PF01207 Dihydrouridine synthase (Dus) DLK00_RS03120 PF00892 EamA-like transporter family DLK00_RS03125 PF00474 Sodium:solute symporter family DLK00_RS03130 PF06196 Protein of unknown function (DUF997) DLK00_RS03135 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DLK00_RS03135 PF00289 Biotin carboxylase, N-terminal domain DLK00_RS03135 PF02785 Biotin carboxylase C-terminal domain DLK00_RS03140 PF00364 Biotin-requiring enzyme DLK00_RS03145 PF01220 Dehydroquinase class II DLK00_RS03150 PF13378 Enolase C-terminal domain-like DLK00_RS03155 PF00378 Enoyl-CoA hydratase/isomerase DLK00_RS03165 PF17311 Family of unknown function (DUF5358) DLK00_RS03170 PF01649 Ribosomal protein S20 DLK00_RS03190 PF06827 Zinc finger found in FPG and IleRS DLK00_RS03190 PF00133 tRNA synthetases class I (I, L, M and V) DLK00_RS03190 PF08264 Anticodon-binding domain of tRNA DLK00_RS03195 PF01230 HIT domain DLK00_RS03200 PF07233 Protein of unknown function (DUF1425) DLK00_RS03205 PF00933 Glycosyl hydrolase family 3 N terminal domain DLK00_RS03215 PF13545 Crp-like helix-turn-helix domain DLK00_RS03215 PF00027 Cyclic nucleotide-binding domain DLK00_RS03220 PF06794 Uncharacterised protein family (UPF0270) DLK00_RS03225 PF00440 Bacterial regulatory proteins, tetR family DLK00_RS03230 PF00692 dUTPase DLK00_RS03240 PF04002 RadC-like JAB domain DLK00_RS03245 PF00830 Ribosomal L28 family DLK00_RS03250 PF00471 Ribosomal protein L33 DLK00_RS03260 PF00282 Pyridoxal-dependent decarboxylase conserved domain DLK00_RS03265 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DLK00_RS03265 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DLK00_RS03265 PF06827 Zinc finger found in FPG and IleRS DLK00_RS03280 PF03477 ATP cone domain DLK00_RS03285 PF17946 RecC C-terminal domain DLK00_RS03290 PF17344 Family of unknown function (DUF5374) DLK00_RS03295 PF10833 Protein of unknown function (DUF2572) DLK00_RS03305 PF07963 Prokaryotic N-terminal methylation motif DLK00_RS03310 PF00459 Inositol monophosphatase family DLK00_RS03320 PF08534 Redoxin DLK00_RS03335 PF00113 Enolase, C-terminal TIM barrel domain DLK00_RS03335 PF03952 Enolase, N-terminal domain DLK00_RS03340 PF10008 Uncharacterized protein conserved in bacteria (DUF2251) DLK00_RS03350 PF03738 Glutathionylspermidine synthase preATP-grasp DLK00_RS03355 PF06628 Catalase-related immune-responsive DLK00_RS03355 PF00199 Catalase DLK00_RS03360 PF02091 Glycyl-tRNA synthetase alpha subunit DLK00_RS03370 PF04480 Protein of unknown function (DUF559) DLK00_RS03375 PF02092 Glycyl-tRNA synthetase beta subunit DLK00_RS03375 PF05746 DALR anticodon binding domain DLK00_RS03405 PF05016 ParE toxin of type II toxin-antitoxin system, parDE DLK00_RS03415 PF14840 Processivity clamp loader gamma complex DNA pol III C-term DLK00_RS03415 PF06144 DNA polymerase III, delta subunit DLK00_RS03420 PF04390 Lipopolysaccharide-assembly DLK00_RS03430 PF01255 Putative undecaprenyl diphosphate synthase DLK00_RS03450 PF03938 Outer membrane protein (OmpH-like) DLK00_RS03455 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DLK00_RS03455 PF00132 Bacterial transferase hexapeptide (six repeats) DLK00_RS03460 PF00889 Elongation factor TS DLK00_RS03465 PF00318 Ribosomal protein S2 DLK00_RS03470 PF08241 Methyltransferase domain DLK00_RS03475 PF00999 Sodium/hydrogen exchanger family DLK00_RS03475 PF02254 TrkA-N domain DLK00_RS03490 PF10818 Protein of unknown function (DUF2547) DLK00_RS03495 PF05258 Dna[CI] antecedent, DciA DLK00_RS03500 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DLK00_RS03515 PF01925 Sulfite exporter TauE/SafE DLK00_RS03520 PF00293 NUDIX domain DLK00_RS03525 PF01472 PUA domain DLK00_RS03525 PF00696 Amino acid kinase family DLK00_RS03535 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DLK00_RS03535 PF00529 HlyD membrane-fusion protein of T1SS DLK00_RS03540 PF07690 Major Facilitator Superfamily DLK00_RS03545 PF05036 Sporulation related domain DLK00_RS03550 PF00873 AcrB/AcrD/AcrF family DLK00_RS03555 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DLK00_RS03560 PF00440 Bacterial regulatory proteins, tetR family DLK00_RS03565 PF00665 Integrase core domain DLK00_RS03565 PF13333 Integrase core domain DLK00_RS03565 PF13276 HTH-like domain DLK00_RS03575 PF00271 Helicase conserved C-terminal domain DLK00_RS03575 PF00270 DEAD/DEAH box helicase DLK00_RS03580 PF03884 DNA gyrase inhibitor YacG DLK00_RS03590 PF00464 Serine hydroxymethyltransferase DLK00_RS03610 PF07681 DoxX DLK00_RS03615 PF11412 Disulphide bond corrector protein DsbC DLK00_RS03615 PF00085 Thioredoxin DLK00_RS03615 PF02683 Cytochrome C biogenesis protein transmembrane region DLK00_RS03620 PF00486 Transcriptional regulatory protein, C terminal DLK00_RS03620 PF00072 Response regulator receiver domain DLK00_RS03630 PF02677 Epoxyqueuosine reductase QueH DLK00_RS03635 PF00348 Polyprenyl synthetase DLK00_RS03640 PF00829 Ribosomal prokaryotic L21 protein DLK00_RS03645 PF01016 Ribosomal L27 protein DLK00_RS03650 PF00892 EamA-like transporter family DLK00_RS03660 PF00334 Nucleoside diphosphate kinase DLK00_RS03665 PF12404 Peptidase DLK00_RS03665 PF00883 Cytosol aminopeptidase family, catalytic domain DLK00_RS03670 PF04932 O-Antigen ligase DLK00_RS03675 PF16363 GDP-mannose 4,6 dehydratase DLK00_RS03680 PF02397 Bacterial sugar transferase DLK00_RS03700 PF00535 Glycosyl transferase family 2 DLK00_RS03720 PF00120 Glutamine synthetase, catalytic domain DLK00_RS03720 PF03951 Glutamine synthetase, beta-Grasp domain DLK00_RS03730 PF00679 Elongation factor G C-terminus DLK00_RS03730 PF00009 Elongation factor Tu GTP binding domain DLK00_RS03730 PF03144 Elongation factor Tu domain 2 DLK00_RS03735 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DLK00_RS03735 PF01243 Pyridoxamine 5'-phosphate oxidase DLK00_RS03740 PF02592 Putative vitamin uptake transporter DLK00_RS03755 PF00588 SpoU rRNA Methylase family DLK00_RS03755 PF08032 RNA 2'-O ribose methyltransferase substrate binding DLK00_RS03760 PF17871 AAA lid domain DLK00_RS03760 PF02861 Clp amino terminal domain, pathogenicity island component DLK00_RS03760 PF00004 ATPase family associated with various cellular activities (AAA) DLK00_RS03760 PF10431 C-terminal, D2-small domain, of ClpB protein DLK00_RS03760 PF07724 AAA domain (Cdc48 subfamily) DLK00_RS03775 PF05164 Cell division protein ZapA DLK00_RS03780 PF01367 5'-3' exonuclease, C-terminal SAM fold DLK00_RS03780 PF01612 3'-5' exonuclease DLK00_RS03780 PF00476 DNA polymerase family A DLK00_RS03780 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DLK00_RS03795 PF03741 Integral membrane protein TerC family DLK00_RS03805 PF00092 von Willebrand factor type A domain DLK00_RS03830 PF02342 TerD domain DLK00_RS03840 PF01243 Pyridoxamine 5'-phosphate oxidase DLK00_RS03840 PF10615 Protein of unknown function (DUF2470) DLK00_RS03845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DLK00_RS03850 PF07690 Major Facilitator Superfamily DLK00_RS03855 PF03205 Molybdopterin guanine dinucleotide synthesis protein B DLK00_RS03875 PF05958 tRNA (Uracil-5-)-methyltransferase DLK00_RS03880 PF04219 Protein of unknown function, DUF DLK00_RS03885 PF01323 DSBA-like thioredoxin domain DLK00_RS03890 PF06288 Protein of unknown function (DUF1040) DLK00_RS03895 PF12804 MobA-like NTP transferase domain DLK00_RS03905 PF11893 Domain of unknown function (DUF3413) DLK00_RS03905 PF00884 Sulfatase DLK00_RS03910 PF07208 Protein of unknown function (DUF1414) DLK00_RS03915 PF04245 37-kD nucleoid-associated bacterial protein DLK00_RS03920 PF04355 SmpA / OmlA family DLK00_RS03925 PF00072 Response regulator receiver domain DLK00_RS03925 PF00486 Transcriptional regulatory protein, C terminal DLK00_RS03930 PF00152 tRNA synthetases class II (D, K and N) DLK00_RS03935 PF00890 FAD binding domain DLK00_RS03935 PF02910 Fumarate reductase flavoprotein C-term DLK00_RS03940 PF13183 4Fe-4S dicluster domain DLK00_RS03940 PF13085 2Fe-2S iron-sulfur cluster binding domain DLK00_RS03945 PF02300 Fumarate reductase subunit C DLK00_RS03950 PF02313 Fumarate reductase subunit D DLK00_RS03955 PF00912 Transglycosylase DLK00_RS03960 PF01371 Trp repressor protein DLK00_RS03965 PF01464 Transglycosylase SLT domain DLK00_RS03965 PF14718 Soluble lytic murein transglycosylase L domain DLK00_RS03970 PF03795 YCII-related domain DLK00_RS03975 PF03061 Thioesterase superfamily DLK00_RS03980 PF04279 Intracellular septation protein A DLK00_RS03990 PF02653 Branched-chain amino acid transport system / permease component DLK00_RS03995 PF00005 ABC transporter DLK00_RS04000 PF13407 Periplasmic binding protein domain DLK00_RS04005 PF00356 Bacterial regulatory proteins, lacI family DLK00_RS04010 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain DLK00_RS04010 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain DLK00_RS04015 PF08544 GHMP kinases C terminal DLK00_RS04015 PF00288 GHMP kinases N terminal domain DLK00_RS04015 PF10509 Galactokinase galactose-binding signature DLK00_RS04020 PF01263 Aldose 1-epimerase DLK00_RS04025 PF03695 Uncharacterised protein family (UPF0149) DLK00_RS04030 PF05195 Aminopeptidase P, N-terminal domain DLK00_RS04030 PF00557 Metallopeptidase family M24 DLK00_RS04035 PF00582 Universal stress protein family DLK00_RS04040 PF02272 DHHA1 domain DLK00_RS04040 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DLK00_RS04040 PF01411 tRNA synthetases class II (A) DLK00_RS04045 PF02599 Global regulator protein family DLK00_RS04050 PF00483 Nucleotidyl transferase DLK00_RS04055 PF00206 Lyase DLK00_RS04055 PF14698 Argininosuccinate lyase C-terminal DLK00_RS04060 PF01430 Hsp33 protein DLK00_RS04065 PF01293 Phosphoenolpyruvate carboxykinase DLK00_RS04070 PF01765 Ribosome recycling factor DLK00_RS04075 PF13288 DXP reductoisomerase C-terminal domain DLK00_RS04075 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DLK00_RS04075 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DLK00_RS04085 PF04055 Radical SAM superfamily DLK00_RS04085 PF13186 Iron-sulfur cluster-binding domain DLK00_RS04095 PF01196 Ribosomal protein L17 DLK00_RS04100 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DLK00_RS04100 PF01000 RNA polymerase Rpb3/RpoA insert domain DLK00_RS04100 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DLK00_RS04105 PF01479 S4 domain DLK00_RS04105 PF00163 Ribosomal protein S4/S9 N-terminal domain DLK00_RS04110 PF00411 Ribosomal protein S11 DLK00_RS04115 PF00416 Ribosomal protein S13/S18 DLK00_RS04120 PF00444 Ribosomal protein L36 DLK00_RS04125 PF00344 SecY translocase DLK00_RS04130 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DLK00_RS04135 PF00327 Ribosomal protein L30p/L7e DLK00_RS04140 PF03719 Ribosomal protein S5, C-terminal domain DLK00_RS04140 PF00333 Ribosomal protein S5, N-terminal domain DLK00_RS04145 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DLK00_RS04150 PF00347 Ribosomal protein L6 DLK00_RS04155 PF00410 Ribosomal protein S8 DLK00_RS04160 PF00253 Ribosomal protein S14p/S29e DLK00_RS04165 PF00281 Ribosomal protein L5 DLK00_RS04165 PF00673 ribosomal L5P family C-terminus DLK00_RS04170 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DLK00_RS04170 PF00467 KOW motif DLK00_RS04175 PF00238 Ribosomal protein L14p/L23e DLK00_RS04185 PF00366 Ribosomal protein S17 DLK00_RS04190 PF00831 Ribosomal L29 protein DLK00_RS04195 PF00252 Ribosomal protein L16p/L10e DLK00_RS04200 PF00189 Ribosomal protein S3, C-terminal domain DLK00_RS04200 PF07650 KH domain DLK00_RS04205 PF00237 Ribosomal protein L22p/L17e DLK00_RS04210 PF00203 Ribosomal protein S19 DLK00_RS04215 PF00181 Ribosomal Proteins L2, RNA binding domain DLK00_RS04215 PF03947 Ribosomal Proteins L2, C-terminal domain DLK00_RS04220 PF00276 Ribosomal protein L23 DLK00_RS04225 PF00573 Ribosomal protein L4/L1 family DLK00_RS04230 PF00297 Ribosomal protein L3 DLK00_RS04235 PF00338 Ribosomal protein S10p/S20e DLK00_RS04240 PF03466 LysR substrate binding domain DLK00_RS04240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLK00_RS04245 PF01144 Coenzyme A transferase DLK00_RS04250 PF01144 Coenzyme A transferase DLK00_RS04255 PF02667 Short chain fatty acid transporter DLK00_RS04260 PF00108 Thiolase, N-terminal domain DLK00_RS04260 PF02803 Thiolase, C-terminal domain DLK00_RS04265 PF18075 FtsX extracellular domain DLK00_RS04270 PF00005 ABC transporter DLK00_RS04300 PF01467 Cytidylyltransferase-like DLK00_RS04300 PF13521 AAA domain DLK00_RS04320 PF01464 Transglycosylase SLT domain DLK00_RS04320 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain DLK00_RS04325 PF04362 Bacterial Fe(2+) trafficking DLK00_RS04330 PF00730 HhH-GPD superfamily base excision DNA repair protein DLK00_RS04330 PF14815 NUDIX domain DLK00_RS04335 PF01197 Ribosomal protein L31 DLK00_RS04340 PF00300 Histidine phosphatase superfamily (branch 1) DLK00_RS04345 PF01551 Peptidase family M23 DLK00_RS04350 PF04748 Divergent polysaccharide deacetylase DLK00_RS04365 PF02769 AIR synthase related protein, C-terminal domain DLK00_RS04365 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal DLK00_RS04365 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DLK00_RS04375 PF08534 Redoxin DLK00_RS04380 PF01678 Diaminopimelate epimerase DLK00_RS04385 PF00717 Peptidase S24-like DLK00_RS04385 PF01726 LexA DNA binding domain DLK00_RS04400 PF03605 Anaerobic c4-dicarboxylate membrane transporter DLK00_RS04405 PF00581 Rhodanese-like domain DLK00_RS04410 PF02556 Preprotein translocase subunit SecB DLK00_RS04425 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DLK00_RS04425 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DLK00_RS04425 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DLK00_RS04425 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DLK00_RS04435 PF00291 Pyridoxal-phosphate dependent enzyme DLK00_RS04435 PF00585 C-terminal regulatory domain of Threonine dehydratase DLK00_RS04440 PF00920 Dehydratase family DLK00_RS04445 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DLK00_RS04460 PF00149 Calcineurin-like phosphoesterase DLK00_RS04465 PF01553 Acyltransferase DLK00_RS04470 PF07732 Multicopper oxidase DLK00_RS04470 PF07731 Multicopper oxidase DLK00_RS04470 PF00394 Multicopper oxidase DLK00_RS04480 PF04073 Aminoacyl-tRNA editing domain DLK00_RS04480 PF03129 Anticodon binding domain DLK00_RS04480 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DLK00_RS04490 PF01491 Frataxin-like domain DLK00_RS04495 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DLK00_RS04495 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DLK00_RS04500 PF00072 Response regulator receiver domain DLK00_RS04500 PF00196 Bacterial regulatory proteins, luxR family DLK00_RS04505 PF10675 Protein of unknown function (DUF2489) DLK00_RS04510 PF04220 Der GTPase activator (YihI) DLK00_RS04535 PF02386 Cation transport protein DLK00_RS04540 PF09186 Domain of unknown function (DUF1949) DLK00_RS04540 PF01205 Uncharacterized protein family UPF0029 DLK00_RS04545 PF01206 Sulfurtransferase TusA DLK00_RS04550 PF01435 Peptidase family M48 DLK00_RS04555 PF13276 HTH-like domain DLK00_RS04555 PF13333 Integrase core domain DLK00_RS04555 PF00665 Integrase core domain DLK00_RS04570 PF00581 Rhodanese-like domain DLK00_RS04575 PF00892 EamA-like transporter family DLK00_RS04580 PF03466 LysR substrate binding domain DLK00_RS04580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLK00_RS04585 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DLK00_RS04585 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DLK00_RS04595 PF00890 FAD binding domain DLK00_RS04605 PF07690 Major Facilitator Superfamily DLK00_RS04610 PF03009 Glycerophosphoryl diester phosphodiesterase family DLK00_RS04615 PF00230 Major intrinsic protein DLK00_RS04620 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DLK00_RS04620 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DLK00_RS04625 PF00156 Phosphoribosyl transferase domain DLK00_RS04630 PF03009 Glycerophosphoryl diester phosphodiesterase family DLK00_RS04635 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) DLK00_RS04650 PF00665 Integrase core domain DLK00_RS04650 PF13333 Integrase core domain DLK00_RS04650 PF13276 HTH-like domain DLK00_RS04655 PF00849 RNA pseudouridylate synthase DLK00_RS04670 PF17243 POTRA domain TamA domain 1 DLK00_RS04670 PF01103 Surface antigen DLK00_RS04675 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DLK00_RS04680 PF06877 Regulator of ribonuclease activity B DLK00_RS04685 PF01142 tRNA pseudouridine synthase D (TruD) DLK00_RS04690 PF01975 Survival protein SurE DLK00_RS04695 PF09335 SNARE associated Golgi protein DLK00_RS04705 PF01476 LysM domain DLK00_RS04705 PF01551 Peptidase family M23 DLK00_RS04715 PF01212 Beta-eliminating lyase DLK00_RS04735 PF12390 Selenocysteine synthase N terminal DLK00_RS04735 PF03841 L-seryl-tRNA selenium transferase DLK00_RS04740 PF09106 Elongation factor SelB, winged helix DLK00_RS04740 PF09107 Elongation factor SelB, winged helix DLK00_RS04740 PF00009 Elongation factor Tu GTP binding domain DLK00_RS04740 PF03144 Elongation factor Tu domain 2 DLK00_RS04750 PF04221 RelB antitoxin DLK00_RS04755 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ DLK00_RS04765 PF07715 TonB-dependent Receptor Plug Domain DLK00_RS04765 PF00593 TonB dependent receptor DLK00_RS04765 PF04886 PT repeat DLK00_RS04770 PF05698 Bacterial trigger factor protein (TF) C-terminus DLK00_RS04770 PF05697 Bacterial trigger factor protein (TF) DLK00_RS04770 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DLK00_RS04775 PF00574 Clp protease DLK00_RS04780 PF06689 ClpX C4-type zinc finger DLK00_RS04780 PF10431 C-terminal, D2-small domain, of ClpB protein DLK00_RS04780 PF07724 AAA domain (Cdc48 subfamily) DLK00_RS04785 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DLK00_RS04790 PF02357 Transcription termination factor nusG DLK00_RS04790 PF00467 KOW motif DLK00_RS04795 PF04333 MlaA lipoprotein DLK00_RS04800 PF01042 Endoribonuclease L-PSP DLK00_RS04810 PF13276 HTH-like domain DLK00_RS04810 PF13333 Integrase core domain DLK00_RS04810 PF00665 Integrase core domain DLK00_RS04815 PF02899 Phage integrase, N-terminal SAM-like domain DLK00_RS04815 PF00589 Phage integrase family DLK00_RS04845 PF10122 Mu-like prophage protein Com DLK00_RS04915 PF17482 Phage tail sheath C-terminal domain DLK00_RS04915 PF04984 Phage tail sheath protein subtilisin-like domain DLK00_RS04940 PF10124 Mu-like prophage major head subunit gpT DLK00_RS04945 PF10123 Mu-like prophage I protein DLK00_RS05025 PF08346 AntA/AntB antirepressor DLK00_RS05025 PF10548 P22AR C-terminal domain DLK00_RS05050 PF17457 Family of unknown function (DUF5420) DLK00_RS05105 PF13276 HTH-like domain DLK00_RS05105 PF13333 Integrase core domain DLK00_RS05105 PF00665 Integrase core domain DLK00_RS05115 PF07687 Peptidase dimerisation domain DLK00_RS05115 PF01546 Peptidase family M20/M25/M40 DLK00_RS05120 PF00156 Phosphoribosyl transferase domain DLK00_RS05125 PF04977 Septum formation initiator DLK00_RS05130 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DLK00_RS05140 PF02580 D-Tyr-tRNA(Tyr) deacylase DLK00_RS05145 PF00258 Flavodoxin DLK00_RS05150 PF06005 Cell division protein ZapB DLK00_RS05155 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DLK00_RS05160 PF01381 Helix-turn-helix DLK00_RS05165 PF13657 HipA N-terminal domain DLK00_RS05170 PF07804 HipA-like C-terminal domain DLK00_RS05175 PF00664 ABC transporter transmembrane region DLK00_RS05175 PF00005 ABC transporter DLK00_RS05180 PF00664 ABC transporter transmembrane region DLK00_RS05180 PF00005 ABC transporter DLK00_RS05185 PF07715 TonB-dependent Receptor Plug Domain DLK00_RS05185 PF04886 PT repeat DLK00_RS05185 PF00593 TonB dependent receptor DLK00_RS05195 PF13333 Integrase core domain DLK00_RS05195 PF00665 Integrase core domain DLK00_RS05195 PF13276 HTH-like domain DLK00_RS05200 PF05973 Phage derived protein Gp49-like (DUF891) DLK00_RS05205 PF01381 Helix-turn-helix DLK00_RS05210 PF00005 ABC transporter DLK00_RS05210 PF12848 ABC transporter DLK00_RS05215 PF01396 Topoisomerase DNA binding C4 zinc finger DLK00_RS05220 PF01300 Telomere recombination DLK00_RS05225 PF08501 Shikimate dehydrogenase substrate binding domain DLK00_RS05225 PF01488 Shikimate / quinate 5-dehydrogenase DLK00_RS05225 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DLK00_RS05240 PF00535 Glycosyl transferase family 2 DLK00_RS05250 PF01467 Cytidylyltransferase-like DLK00_RS05260 PF13361 UvrD-like helicase C-terminal domain DLK00_RS05260 PF00580 UvrD/REP helicase N-terminal domain DLK00_RS05265 PF02525 Flavodoxin-like fold DLK00_RS05270 PF02308 MgtC family DLK00_RS05275 PF02774 Semialdehyde dehydrogenase, dimerisation domain DLK00_RS05275 PF01118 Semialdehyde dehydrogenase, NAD binding domain DLK00_RS05280 PF12146 Serine aminopeptidase, S33 DLK00_RS05305 PF10122 Mu-like prophage protein Com DLK00_RS05325 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) DLK00_RS05330 PF04865 Baseplate J-like protein DLK00_RS05335 PF07409 Phage protein GP46 DLK00_RS05340 PF06890 Bacteriophage Mu Gp45 protein DLK00_RS05355 PF07157 DNA circularisation protein N-terminus DLK00_RS05365 PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 DLK00_RS05370 PF10618 Phage tail tube protein DLK00_RS05380 PF10948 Protein of unknown function (DUF2635) DLK00_RS05390 PF07030 Protein of unknown function (DUF1320) DLK00_RS05395 PF17891 Mu-like prophage FluMu N-terminal domain DLK00_RS05395 PF12949 HeH/LEM domain DLK00_RS05400 PF10124 Mu-like prophage major head subunit gpT DLK00_RS05415 PF05069 Phage virion morphogenesis family DLK00_RS05420 PF04233 Phage Mu protein F like protein DLK00_RS05425 PF06074 Protein of unknown function (DUF935) DLK00_RS05430 PF03237 Terminase-like family DLK00_RS05440 PF08461 Ribonuclease R winged-helix domain DLK00_RS05465 PF10841 Protein of unknown function (DUF2644) DLK00_RS05480 PF08765 Mor transcription activator family DLK00_RS05490 PF10548 P22AR C-terminal domain DLK00_RS05490 PF08346 AntA/AntB antirepressor DLK00_RS05500 PF06252 Protein of unknown function (DUF1018) DLK00_RS05515 PF07352 Bacteriophage Mu Gam like protein DLK00_RS05525 PF13401 AAA domain DLK00_RS05525 PF09077 Mu B transposition protein, C terminal DLK00_RS05530 PF09299 Mu transposase, C-terminal DLK00_RS05530 PF09039 Mu DNA binding, I gamma subdomain DLK00_RS05530 PF02316 Mu DNA-binding domain DLK00_RS05530 PF02914 Bacteriophage Mu transposase DLK00_RS05540 PF01381 Helix-turn-helix DLK00_RS05540 PF00717 Peptidase S24-like DLK00_RS05575 PF00132 Bacterial transferase hexapeptide (six repeats) DLK00_RS05575 PF12804 MobA-like NTP transferase domain DLK00_RS05580 PF00542 Ribosomal protein L7/L12 C-terminal domain DLK00_RS05580 PF16320 Ribosomal protein L7/L12 dimerisation domain DLK00_RS05585 PF00466 Ribosomal protein L10 DLK00_RS05590 PF00206 Lyase DLK00_RS05590 PF08328 Adenylosuccinate lyase C-terminal DLK00_RS05595 PF04356 Protein of unknown function (DUF489) DLK00_RS05600 PF00579 tRNA synthetases class I (W and Y) DLK00_RS05605 PF04175 Protein of unknown function (DUF406) DLK00_RS05630 PF01207 Dihydrouridine synthase (Dus) DLK00_RS05635 PF00654 Voltage gated chloride channel DLK00_RS05640 PF03144 Elongation factor Tu domain 2 DLK00_RS05640 PF00009 Elongation factor Tu GTP binding domain DLK00_RS05640 PF03143 Elongation factor Tu C-terminal domain DLK00_RS05665 PF00485 Phosphoribulokinase / Uridine kinase family DLK00_RS05675 PF03872 Anti sigma-E protein RseA, N-terminal domain DLK00_RS05675 PF03873 Anti sigma-E protein RseA, C-terminal domain DLK00_RS05680 PF08281 Sigma-70, region 4 DLK00_RS05680 PF04542 Sigma-70 region 2 DLK00_RS05685 PF03937 Flavinator of succinate dehydrogenase DLK00_RS05690 PF01741 Large-conductance mechanosensitive channel, MscL DLK00_RS05700 PF01029 NusB family DLK00_RS05700 PF01189 16S rRNA methyltransferase RsmB/F DLK00_RS05705 PF02911 Formyl transferase, C-terminal domain DLK00_RS05705 PF00551 Formyl transferase DLK00_RS05740 PF04993 TfoX N-terminal domain DLK00_RS05740 PF04994 TfoX C-terminal domain DLK00_RS05745 PF00154 recA bacterial DNA recombination protein DLK00_RS05750 PF02631 RecX family DLK00_RS05765 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DLK00_RS05765 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DLK00_RS05805 PF03606 C4-dicarboxylate anaerobic carrier DLK00_RS05815 PF02872 5'-nucleotidase, C-terminal domain DLK00_RS05815 PF00149 Calcineurin-like phosphoesterase DLK00_RS05825 PF13932 GidA associated domain DLK00_RS05825 PF01134 Glucose inhibited division protein A DLK00_RS05830 PF00164 Ribosomal protein S12/S23 DLK00_RS05835 PF00177 Ribosomal protein S7p/S5e DLK00_RS05840 PF00679 Elongation factor G C-terminus DLK00_RS05840 PF14492 Elongation Factor G, domain II DLK00_RS05840 PF00009 Elongation factor Tu GTP binding domain DLK00_RS05840 PF03144 Elongation factor Tu domain 2 DLK00_RS05840 PF03764 Elongation factor G, domain IV DLK00_RS05845 PF00009 Elongation factor Tu GTP binding domain DLK00_RS05845 PF03143 Elongation factor Tu C-terminal domain DLK00_RS05845 PF03144 Elongation factor Tu domain 2 DLK00_RS05850 PF04077 DsrH like protein DLK00_RS05855 PF02635 DsrE/DsrF-like family DLK00_RS05860 PF02635 DsrE/DsrF-like family DLK00_RS05865 PF08348 YheO-like PAS domain DLK00_RS05865 PF13309 HTH domain DLK00_RS05870 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DLK00_RS05870 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DLK00_RS05875 PF04102 SlyX DLK00_RS05880 PF00462 Glutaredoxin DLK00_RS05880 PF08534 Redoxin DLK00_RS05885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLK00_RS05885 PF03466 LysR substrate binding domain DLK00_RS05890 PF00440 Bacterial regulatory proteins, tetR family DLK00_RS05895 PF01272 Transcription elongation factor, GreA/GreB, C-term DLK00_RS05895 PF03449 Transcription elongation factor, N-terminal DLK00_RS05900 PF17674 HHH domain DLK00_RS05900 PF16921 Tex protein YqgF-like domain DLK00_RS05900 PF09371 Tex-like protein N-terminal domain DLK00_RS05900 PF00575 S1 RNA binding domain DLK00_RS05910 PF00834 Ribulose-phosphate 3 epimerase family DLK00_RS05915 PF13419 Haloacid dehalogenase-like hydrolase DLK00_RS05925 PF13276 HTH-like domain DLK00_RS05925 PF00665 Integrase core domain DLK00_RS05925 PF13333 Integrase core domain DLK00_RS05930 PF03590 Aspartate-ammonia ligase DLK00_RS05935 PF01037 Lrp/AsnC ligand binding domain DLK00_RS05935 PF13404 AsnC-type helix-turn-helix domain DLK00_RS05940 PF01479 S4 domain DLK00_RS05945 PF03169 OPT oligopeptide transporter protein DLK00_RS05955 PF00459 Inositol monophosphatase family DLK00_RS05960 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DLK00_RS05960 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DLK00_RS05965 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DLK00_RS05980 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DLK00_RS05980 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DLK00_RS05985 PF10786 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) DLK00_RS05990 PF00149 Calcineurin-like phosphoesterase DLK00_RS06000 PF00398 Ribosomal RNA adenine dimethylase DLK00_RS06005 PF13439 Glycosyltransferase Family 4 DLK00_RS06005 PF00534 Glycosyl transferases group 1 DLK00_RS06010 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) DLK00_RS06015 PF01176 Translation initiation factor 1A / IF-1 DLK00_RS06020 PF01250 Ribosomal protein S6 DLK00_RS06025 PF00436 Single-strand binding protein family DLK00_RS06030 PF01084 Ribosomal protein S18 DLK00_RS06035 PF03948 Ribosomal protein L9, C-terminal domain DLK00_RS06035 PF01281 Ribosomal protein L9, N-terminal domain DLK00_RS06045 PF00166 Chaperonin 10 Kd subunit DLK00_RS06050 PF00547 Urease, gamma subunit DLK00_RS06055 PF00699 Urease beta subunit DLK00_RS06060 PF01979 Amidohydrolase family DLK00_RS06060 PF00449 Urease alpha-subunit, N-terminal domain DLK00_RS06070 PF01730 UreF DLK00_RS06075 PF02492 CobW/HypB/UreG, nucleotide-binding domain DLK00_RS06080 PF01774 UreD urease accessory protein DLK00_RS06085 PF10415 Fumarase C C-terminus DLK00_RS06085 PF00206 Lyase DLK00_RS06090 PF04545 Sigma-70, region 4 DLK00_RS06090 PF04542 Sigma-70 region 2 DLK00_RS06090 PF04539 Sigma-70 region 3 DLK00_RS06090 PF03979 Sigma-70 factor, region 1.1 DLK00_RS06090 PF00140 Sigma-70 factor, region 1.2 DLK00_RS06090 PF04546 Sigma-70, non-essential region DLK00_RS06100 PF01165 Ribosomal protein S21 DLK00_RS06105 PF00814 Glycoprotease family DLK00_RS06110 PF00265 Thymidine kinase DLK00_RS06120 PF00037 4Fe-4S binding domain DLK00_RS06125 PF00445 Ribonuclease T2 family DLK00_RS06130 PF00162 Phosphoglycerate kinase DLK00_RS06135 PF01116 Fructose-bisphosphate aldolase class-II DLK00_RS06150 PF11230 Protein of unknown function (DUF3029) DLK00_RS06155 PF04055 Radical SAM superfamily DLK00_RS06160 PF07670 Nucleoside recognition DLK00_RS06160 PF01773 Na+ dependent nucleoside transporter N-terminus DLK00_RS06160 PF07662 Na+ dependent nucleoside transporter C-terminus DLK00_RS06165 PF01048 Phosphorylase superfamily DLK00_RS06170 PF03946 Ribosomal protein L11, N-terminal domain DLK00_RS06170 PF00298 Ribosomal protein L11, RNA binding domain DLK00_RS06175 PF00687 Ribosomal protein L1p/L10e family DLK00_RS06190 PF00623 RNA polymerase Rpb1, domain 2 DLK00_RS06190 PF04998 RNA polymerase Rpb1, domain 5 DLK00_RS06190 PF04983 RNA polymerase Rpb1, domain 3 DLK00_RS06190 PF04997 RNA polymerase Rpb1, domain 1 DLK00_RS06190 PF05000 RNA polymerase Rpb1, domain 4 DLK00_RS06195 PF03595 Voltage-dependent anion channel DLK00_RS06200 PF18389 TrmO C-terminal domain DLK00_RS06200 PF01980 tRNA-methyltransferase O DLK00_RS06205 PF01040 UbiA prenyltransferase family DLK00_RS06210 PF03737 Aldolase/RraA DLK00_RS06215 PF03350 Uncharacterized protein family, UPF0114 DLK00_RS06220 PF00356 Bacterial regulatory proteins, lacI family DLK00_RS06230 PF13407 Periplasmic binding protein domain DLK00_RS06240 PF00005 ABC transporter DLK00_RS06245 PF05025 RbsD / FucU transport protein family DLK00_RS06270 PF00227 Proteasome subunit DLK00_RS06275 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) DLK00_RS06285 PF02664 S-Ribosylhomocysteinase (LuxS) DLK00_RS06300 PF00874 PRD domain DLK00_RS06305 PF02527 rRNA small subunit methyltransferase G DLK00_RS06315 PF00119 ATP synthase A chain DLK00_RS06320 PF00137 ATP synthase subunit C DLK00_RS06325 PF00430 ATP synthase B/B' CF(0) DLK00_RS06330 PF00213 ATP synthase delta (OSCP) subunit DLK00_RS06335 PF00306 ATP synthase alpha/beta chain, C terminal domain DLK00_RS06335 PF02874 ATP synthase alpha/beta family, beta-barrel domain DLK00_RS06335 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DLK00_RS06340 PF00231 ATP synthase DLK00_RS06345 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DLK00_RS06345 PF02874 ATP synthase alpha/beta family, beta-barrel domain DLK00_RS06350 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DLK00_RS06355 PF03222 Tryptophan/tyrosine permease family DLK00_RS06365 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DLK00_RS06365 PF01502 Phosphoribosyl-AMP cyclohydrolase DLK00_RS06370 PF00977 Histidine biosynthesis protein DLK00_RS06375 PF00977 Histidine biosynthesis protein DLK00_RS06380 PF00117 Glutamine amidotransferase class-I DLK00_RS06405 PF03755 YicC-like family, N-terminal region DLK00_RS06405 PF08340 Domain of unknown function (DUF1732) DLK00_RS06410 PF01571 Aminomethyltransferase folate-binding domain DLK00_RS06415 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DLK00_RS06415 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DLK00_RS06420 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DLK00_RS06425 PF04055 Radical SAM superfamily DLK00_RS06425 PF06969 HemN C-terminal domain DLK00_RS06430 PF00004 ATPase family associated with various cellular activities (AAA) DLK00_RS06430 PF05362 Lon protease (S16) C-terminal proteolytic domain DLK00_RS06430 PF02190 ATP-dependent protease La (LON) substrate-binding domain DLK00_RS06435 PF04393 Protein of unknown function (DUF535) DLK00_RS06440 PF03819 MazG nucleotide pyrophosphohydrolase domain DLK00_RS06445 PF00156 Phosphoribosyl transferase domain DLK00_RS06455 PF02618 YceG-like family DLK00_RS06460 PF02223 Thymidylate kinase DLK00_RS06465 PF09115 DNA polymerase III, delta subunit, C terminal DLK00_RS06470 PF01026 TatD related DNase DLK00_RS06475 PF07509 Protein of unknown function (DUF1523) DLK00_RS06485 PF17375 Family of unknown function (DUF5397) DLK00_RS06490 PF09827 CRISPR associated protein Cas2 DLK00_RS06500 PF00381 PTS HPr component phosphorylation site DLK00_RS06500 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DLK00_RS06505 PF00294 pfkB family carbohydrate kinase DLK00_RS06510 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DLK00_RS06520 PF03840 Preprotein translocase SecG subunit DLK00_RS06530 PF02132 RecR protein DLK00_RS06530 PF13662 Toprim domain DLK00_RS06535 PF02575 YbaB/EbfC DNA-binding family DLK00_RS06545 PF17092 Penicillin-binding protein OB-like domain DLK00_RS06545 PF00912 Transglycosylase DLK00_RS06545 PF00905 Penicillin binding protein transpeptidase domain DLK00_RS06550 PF11104 Type IV pilus assembly protein PilM; DLK00_RS06565 PF04351 Pilus assembly protein, PilP DLK00_RS06570 PF00263 Bacterial type II and III secretion system protein DLK00_RS06570 PF03958 Bacterial type II/III secretion system short domain DLK00_RS06575 PF00156 Phosphoribosyl transferase domain DLK00_RS06585 PF00293 NUDIX domain DLK00_RS06585 PF09297 NADH pyrophosphatase zinc ribbon domain DLK00_RS06590 PF04222 Protein of unknown function (DUF416) DLK00_RS06595 PF00216 Bacterial DNA-binding protein DLK00_RS06600 PF01380 SIS domain DLK00_RS06605 PF02600 Disulfide bond formation protein DsbB DLK00_RS06610 PF06450 Bacterial Na+/H+ antiporter B (NhaB) DLK00_RS06615 PF00392 Bacterial regulatory proteins, gntR family DLK00_RS06615 PF07840 FadR C-terminal domain DLK00_RS06625 PF00588 SpoU rRNA Methylase family DLK00_RS06625 PF08032 RNA 2'-O ribose methyltransferase substrate binding DLK00_RS06630 PF05175 Methyltransferase small domain DLK00_RS06635 PF00270 DEAD/DEAH box helicase DLK00_RS06635 PF00271 Helicase conserved C-terminal domain DLK00_RS06640 PF16325 Peptidase family U32 C-terminal domain DLK00_RS06640 PF01136 Peptidase family U32 DLK00_RS06645 PF00083 Sugar (and other) transporter DLK00_RS06650 PF02581 Thiamine monophosphate synthase DLK00_RS06655 PF08543 Phosphomethylpyrimidine kinase DLK00_RS06660 PF02110 Hydroxyethylthiazole kinase family DLK00_RS06665 PF02462 Opacity family porin protein DLK00_RS06670 PF10150 Ribonuclease E/G family DLK00_RS06670 PF00575 S1 RNA binding domain DLK00_RS06670 PF12111 Polyribonucleotide phosphorylase C terminal DLK00_RS06675 PF00849 RNA pseudouridylate synthase DLK00_RS06675 PF01479 S4 domain DLK00_RS06680 PF17209 Hfq protein DLK00_RS06685 PF00158 Sigma-54 interaction domain DLK00_RS06685 PF18024 Helix-turn-helix domain DLK00_RS06695 PF00005 ABC transporter DLK00_RS06700 PF00950 ABC 3 transport family DLK00_RS06705 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DLK00_RS06710 PF08543 Phosphomethylpyrimidine kinase DLK00_RS06715 PF01171 PP-loop family DLK00_RS06715 PF09179 TilS substrate binding domain DLK00_RS06715 PF11734 TilS substrate C-terminal domain DLK00_RS06720 PF02976 DNA mismatch repair enzyme MutH DLK00_RS06725 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DLK00_RS06725 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DLK00_RS06735 PF04175 Protein of unknown function (DUF406) DLK00_RS06740 PF00149 Calcineurin-like phosphoesterase DLK00_RS06745 PF00293 NUDIX domain DLK00_RS06750 PF02601 Exonuclease VII, large subunit DLK00_RS06750 PF13742 OB-fold nucleic acid binding domain DLK00_RS06755 PF08007 Cupin superfamily protein DLK00_RS06760 PF03658 RnfH family Ubiquitin DLK00_RS06765 PF01195 Peptidyl-tRNA hydrolase DLK00_RS06770 PF01926 50S ribosome-binding GTPase DLK00_RS06770 PF06071 Protein of unknown function (DUF933) DLK00_RS06775 PF01757 Acyltransferase family DLK00_RS06780 PF00570 HRDC domain DLK00_RS06780 PF01612 3'-5' exonuclease DLK00_RS06785 PF13193 AMP-binding enzyme C-terminal domain DLK00_RS06785 PF00501 AMP-binding enzyme DLK00_RS06790 PF03843 Outer membrane lipoprotein Slp family DLK00_RS06795 PF00814 Glycoprotease family DLK00_RS06805 PF03061 Thioesterase superfamily DLK00_RS06815 PF02472 Biopolymer transport protein ExbD/TolR DLK00_RS06820 PF06519 TolA C-terminal DLK00_RS06825 PF04052 TolB amino-terminal domain DLK00_RS06825 PF07676 WD40-like Beta Propeller Repeat DLK00_RS06830 PF00691 OmpA family DLK00_RS06840 PF00589 Phage integrase family DLK00_RS06850 PF10548 P22AR C-terminal domain DLK00_RS06850 PF02498 BRO family, N-terminal domain DLK00_RS06885 PF00436 Single-strand binding protein family DLK00_RS06910 PF01555 DNA methylase DLK00_RS06930 PF07411 Domain of unknown function (DUF1508) DLK00_RS06975 PF03796 DnaB-like helicase C terminal domain DLK00_RS06975 PF00772 DnaB-like helicase N terminal domain DLK00_RS07035 PF10828 Protein of unknown function (DUF2570) DLK00_RS07055 PF03592 Terminase small subunit DLK00_RS07060 PF17288 Terminase RNAseH like domain DLK00_RS07060 PF04466 Phage terminase large subunit DLK00_RS07185 PF10122 Mu-like prophage protein Com DLK00_RS07205 PF02082 Transcriptional regulator DLK00_RS07210 PF00266 Aminotransferase class-V DLK00_RS07215 PF01592 NifU-like N terminal domain DLK00_RS07220 PF01521 Iron-sulphur cluster biosynthesis DLK00_RS07225 PF07743 HSCB C-terminal oligomerisation domain DLK00_RS07230 PF10946 Protein of unknown function DUF2625 DLK00_RS07245 PF04384 Iron-sulphur cluster assembly DLK00_RS07250 PF09976 Tetratricopeptide repeat-like domain DLK00_RS07265 PF13464 Domain of unknown function (DUF4115) DLK00_RS07275 PF04055 Radical SAM superfamily DLK00_RS07280 PF00768 D-alanyl-D-alanine carboxypeptidase DLK00_RS07290 PF01297 Zinc-uptake complex component A periplasmic DLK00_RS07300 PF00950 ABC 3 transport family DLK00_RS07305 PF00950 ABC 3 transport family DLK00_RS07310 PF03070 TENA/THI-4/PQQC family DLK00_RS07315 PF09084 NMT1/THI5 like DLK00_RS07320 PF00528 Binding-protein-dependent transport system inner membrane component DLK00_RS07325 PF00005 ABC transporter DLK00_RS07330 PF06002 Alpha-2,3-sialyltransferase (CST-I) DLK00_RS07335 PF01370 NAD dependent epimerase/dehydratase family DLK00_RS07345 PF05191 Adenylate kinase, active site lid DLK00_RS07355 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) DLK00_RS07360 PF12801 4Fe-4S binding domain DLK00_RS07360 PF12837 4Fe-4S binding domain DLK00_RS07370 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DLK00_RS07370 PF00384 Molybdopterin oxidoreductase DLK00_RS07370 PF01568 Molydopterin dinucleotide binding domain DLK00_RS07370 PF10518 TAT (twin-arginine translocation) pathway signal sequence DLK00_RS07375 PF03927 NapD protein DLK00_RS07380 PF13187 4Fe-4S dicluster domain DLK00_RS07380 PF12838 4Fe-4S dicluster domain DLK00_RS07385 PF04320 Protein with unknown function (DUF469) DLK00_RS07390 PF02390 Putative methyltransferase DLK00_RS07405 PF00543 Nitrogen regulatory protein P-II DLK00_RS07410 PF00994 Probable molybdopterin binding domain DLK00_RS07415 PF01219 Prokaryotic diacylglycerol kinase DLK00_RS07420 PF13291 ACT domain DLK00_RS07420 PF02824 TGS domain DLK00_RS07420 PF04607 Region found in RelA / SpoT proteins DLK00_RS07430 PF02565 Recombination protein O C terminal DLK00_RS07430 PF11967 Recombination protein O N terminal DLK00_RS07440 PF08525 Opacity-associated protein A N-terminal motif DLK00_RS07440 PF04225 Opacity-associated protein A LysM-like domain DLK00_RS07445 PF04055 Radical SAM superfamily DLK00_RS07450 PF08207 Elongation factor P (EF-P) KOW-like domain DLK00_RS07450 PF01132 Elongation factor P (EF-P) OB domain DLK00_RS07450 PF09285 Elongation factor P, C-terminal DLK00_RS07460 PF07445 Primosomal replication protein priC DLK00_RS07465 PF13726 Na+-H+ antiporter family DLK00_RS07465 PF03553 Na+/H+ antiporter family DLK00_RS07470 PF00929 Exonuclease DLK00_RS07475 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DLK00_RS07480 PF01850 PIN domain DLK00_RS07485 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DLK00_RS07490 PF13649 Methyltransferase domain DLK00_RS07495 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family DLK00_RS07500 PF02938 GAD domain DLK00_RS07500 PF01336 OB-fold nucleic acid binding domain DLK00_RS07500 PF00152 tRNA synthetases class II (D, K and N) DLK00_RS07505 PF00293 NUDIX domain DLK00_RS07510 PF01709 Transcriptional regulator DLK00_RS07515 PF02075 Crossover junction endodeoxyribonuclease RuvC DLK00_RS07520 PF01330 RuvA N terminal domain DLK00_RS07520 PF07499 RuvA, C-terminal domain DLK00_RS07530 PF17274 Family of unknown function (DUF5339) DLK00_RS07550 PF04381 Putative exonuclease, RdgC DLK00_RS07555 PF03652 Holliday junction resolvase DLK00_RS07565 PF04452 RNA methyltransferase DLK00_RS07575 PF03471 Transporter associated domain DLK00_RS07575 PF00571 CBS domain DLK00_RS07580 PF01510 N-acetylmuramoyl-L-alanine amidase DLK00_RS07585 PF07963 Prokaryotic N-terminal methylation motif DLK00_RS07590 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DLK00_RS07590 PF00437 Type II/IV secretion system protein DLK00_RS07600 PF01478 Type IV leader peptidase family DLK00_RS07605 PF07498 Rho termination factor, N-terminal domain DLK00_RS07605 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DLK00_RS07605 PF07497 Rho termination factor, RNA-binding domain DLK00_RS07610 PF01340 Met Apo-repressor, MetJ DLK00_RS07615 PF09278 MerR, DNA binding DLK00_RS07615 PF00376 MerR family regulatory protein DLK00_RS07620 PF00403 Heavy-metal-associated domain DLK00_RS07625 PF00403 Heavy-metal-associated domain DLK00_RS07630 PF00403 Heavy-metal-associated domain DLK00_RS07635 PF00403 Heavy-metal-associated domain DLK00_RS07640 PF00403 Heavy-metal-associated domain DLK00_RS07650 PF03222 Tryptophan/tyrosine permease family DLK00_RS07660 PF03222 Tryptophan/tyrosine permease family DLK00_RS07665 PF00155 Aminotransferase class I and II DLK00_RS07675 PF00425 chorismate binding enzyme DLK00_RS07680 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DLK00_RS07680 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DLK00_RS07680 PF16582 Middle domain of thiamine pyrophosphate DLK00_RS07685 PF00561 alpha/beta hydrolase fold DLK00_RS07690 PF07690 Major Facilitator Superfamily DLK00_RS07695 PF01048 Phosphorylase superfamily DLK00_RS07700 PF03473 MOSC domain DLK00_RS07705 PF02810 SEC-C motif DLK00_RS07710 PF03631 Virulence factor BrkB DLK00_RS07715 PF00884 Sulfatase DLK00_RS07740 PF00749 tRNA synthetases class I (E and Q), catalytic domain DLK00_RS07750 PF03725 3' exoribonuclease family, domain 2 DLK00_RS07750 PF01138 3' exoribonuclease family, domain 1 DLK00_RS07755 PF00156 Phosphoribosyl transferase domain DLK00_RS07760 PF05099 Tellurite resistance protein TerB DLK00_RS07760 PF00226 DnaJ domain DLK00_RS07765 PF01207 Dihydrouridine synthase (Dus) DLK00_RS07770 PF04545 Sigma-70, region 4 DLK00_RS07770 PF00140 Sigma-70 factor, region 1.2 DLK00_RS07770 PF04542 Sigma-70 region 2 DLK00_RS07780 PF01565 FAD binding domain DLK00_RS07780 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DLK00_RS07785 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DLK00_RS07785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DLK00_RS07785 PF07730 Histidine kinase DLK00_RS07785 PF00672 HAMP domain DLK00_RS07790 PF02660 Glycerol-3-phosphate acyltransferase DLK00_RS07795 PF02152 Dihydroneopterin aldolase DLK00_RS07815 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DLK00_RS07825 PF01725 Ham1 family DLK00_RS07840 PF00589 Phage integrase family DLK00_RS07840 PF13356 Arm DNA-binding domain DLK00_RS07850 PF05930 Prophage CP4-57 regulatory protein (AlpA) DLK00_RS07915 PF05016 ParE toxin of type II toxin-antitoxin system, parDE DLK00_RS07925 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DLK00_RS07930 PF06804 NlpB/DapX lipoprotein DLK00_RS07935 PF00701 Dihydrodipicolinate synthetase family DLK00_RS07940 PF00578 AhpC/TSA family DLK00_RS07945 PF01618 MotA/TolQ/ExbB proton channel family DLK00_RS07950 PF02472 Biopolymer transport protein ExbD/TolR DLK00_RS07955 PF03544 Gram-negative bacterial TonB protein C-terminal DLK00_RS07960 PF00436 Single-strand binding protein family DLK00_RS07985 PF01702 Queuine tRNA-ribosyltransferase DLK00_RS07990 PF01814 Hemerythrin HHE cation binding domain DLK00_RS07995 PF01206 Sulfurtransferase TusA DLK00_RS08000 PF02699 Preprotein translocase subunit DLK00_RS08010 PF02355 Protein export membrane protein DLK00_RS08010 PF07549 SecD/SecF GG Motif DLK00_RS08015 PF01594 AI-2E family transporter DLK00_RS08020 PF03960 ArsC family DLK00_RS08025 PF03889 Alternative ribosome-rescue factor A DLK00_RS08030 PF17347 Family of unknown function (DUF5377) DLK00_RS08040 PF00270 DEAD/DEAH box helicase DLK00_RS08040 PF00271 Helicase conserved C-terminal domain DLK00_RS08040 PF03880 DbpA RNA binding domain DLK00_RS08060 PF04074 YhcH/YjgK/YiaL DLK00_RS08065 PF05525 Branched-chain amino acid transport protein DLK00_RS08070 PF06965 Na+/H+ antiporter 1 DLK00_RS08075 PF01037 Lrp/AsnC ligand binding domain DLK00_RS08080 PF00892 EamA-like transporter family DLK00_RS08085 PF00117 Glutamine amidotransferase class-I DLK00_RS08085 PF02540 NAD synthase DLK00_RS08085 PF00958 GMP synthase C terminal domain DLK00_RS08090 PF00571 CBS domain DLK00_RS08090 PF00478 IMP dehydrogenase / GMP reductase domain DLK00_RS08095 PF03099 Biotin/lipoate A/B protein ligase family DLK00_RS08095 PF02237 Biotin protein ligase C terminal domain DLK00_RS08120 PF03167 Uracil DNA glycosylase superfamily DLK00_RS08125 PF00512 His Kinase A (phospho-acceptor) domain DLK00_RS08125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DLK00_RS08125 PF18415 Histidine kinase receptor ArcB trans-membrane domain DLK00_RS08130 PF04224 Protein of unknown function, DUF417 DLK00_RS08140 PF01432 Peptidase family M3 DLK00_RS08145 PF04304 Protein of unknown function (DUF454) DLK00_RS08150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DLK00_RS08155 PF00925 GTP cyclohydrolase II DLK00_RS08160 PF01569 PAP2 superfamily DLK00_RS08170 PF01761 3-dehydroquinate synthase DLK00_RS08175 PF01202 Shikimate kinase DLK00_RS08180 PF00149 Calcineurin-like phosphoesterase DLK00_RS08180 PF02872 5'-nucleotidase, C-terminal domain DLK00_RS08190 PF00886 Ribosomal protein S16 DLK00_RS08195 PF05239 PRC-barrel domain DLK00_RS08195 PF01782 RimM N-terminal domain DLK00_RS08200 PF01746 tRNA (Guanine-1)-methyltransferase DLK00_RS08205 PF01245 Ribosomal protein L19 DLK00_RS08215 PF03279 Bacterial lipid A biosynthesis acyltransferase DLK00_RS08220 PF01925 Sulfite exporter TauE/SafE DLK00_RS08230 PF01264 Chorismate synthase DLK00_RS08245 PF17206 SeqA protein N-terminal domain DLK00_RS08245 PF03925 SeqA protein C-terminal domain DLK00_RS08255 PF00258 Flavodoxin DLK00_RS08260 PF01475 Ferric uptake regulator family DLK00_RS08265 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DLK00_RS08265 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DLK00_RS08270 PF00902 Sec-independent protein translocase protein (TatC) DLK00_RS08285 PF13411 MerR HTH family regulatory protein DLK00_RS08290 PF08240 Alcohol dehydrogenase GroES-like domain DLK00_RS08290 PF00107 Zinc-binding dehydrogenase DLK00_RS08295 PF00756 Putative esterase DLK00_RS08305 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) DLK00_RS08305 PF11973 NQRA C-terminal domain DLK00_RS08310 PF03116 NQR2, RnfD, RnfE family DLK00_RS08315 PF04205 FMN-binding domain DLK00_RS08320 PF02508 Rnf-Nqr subunit, membrane protein DLK00_RS08325 PF02508 Rnf-Nqr subunit, membrane protein DLK00_RS08330 PF00970 Oxidoreductase FAD-binding domain DLK00_RS08330 PF00111 2Fe-2S iron-sulfur cluster binding domain DLK00_RS08330 PF00175 Oxidoreductase NAD-binding domain DLK00_RS08340 PF04400 (Na+)-NQR maturation NqrM DLK00_RS08355 PF01479 S4 domain DLK00_RS08355 PF00849 RNA pseudouridylate synthase DLK00_RS08360 PF13525 Outer membrane lipoprotein DLK00_RS08365 PF16747 Surface-adhesin protein E DLK00_RS08370 PF04055 Radical SAM superfamily DLK00_RS08375 PF01228 Glycine radical DLK00_RS08375 PF02901 Pyruvate formate lyase-like DLK00_RS08385 PF00480 ROK family DLK00_RS08390 PF01235 Sodium:alanine symporter family DLK00_RS08395 PF01722 BolA-like protein DLK00_RS08400 PF13333 Integrase core domain DLK00_RS08400 PF00665 Integrase core domain DLK00_RS08400 PF13276 HTH-like domain DLK00_RS08410 PF03923 Uncharacterized lipoprotein DLK00_RS08415 PF07992 Pyridine nucleotide-disulphide oxidoreductase DLK00_RS08415 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DLK00_RS08420 PF02666 Phosphatidylserine decarboxylase DLK00_RS08425 PF02620 Large ribosomal RNA subunit accumulation protein YceD DLK00_RS08430 PF01783 Ribosomal L32p protein family DLK00_RS08435 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DLK00_RS08435 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DLK00_RS08450 PF00698 Acyl transferase domain DLK00_RS08460 PF00550 Phosphopantetheine attachment site DLK00_RS08465 PF03605 Anaerobic c4-dicarboxylate membrane transporter DLK00_RS08470 PF01648 4'-phosphopantetheinyl transferase superfamily DLK00_RS08475 PF01145 SPFH domain / Band 7 family DLK00_RS08480 PF01145 SPFH domain / Band 7 family DLK00_RS08500 PF03480 Bacterial extracellular solute-binding protein, family 7 DLK00_RS08505 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase DLK00_RS08510 PF00480 ROK family DLK00_RS08520 PF00701 Dihydrodipicolinate synthetase family DLK00_RS08530 PF01979 Amidohydrolase family DLK00_RS08535 PF13609 Gram-negative porin DLK00_RS08545 PF00075 RNase H DLK00_RS08560 PF01926 50S ribosome-binding GTPase DLK00_RS08560 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DLK00_RS08565 PF07690 Major Facilitator Superfamily DLK00_RS08580 PF00485 Phosphoribulokinase / Uridine kinase family DLK00_RS08585 PF00860 Permease family DLK00_RS08590 PF00719 Inorganic pyrophosphatase DLK00_RS08610 PF01066 CDP-alcohol phosphatidyltransferase DLK00_RS08620 PF01225 Mur ligase family, catalytic domain DLK00_RS08620 PF02875 Mur ligase family, glutamate ligase domain DLK00_RS08620 PF08245 Mur ligase middle domain DLK00_RS08625 PF10063 Uncharacterized integral membrane protein (DUF2301) DLK00_RS08630 PF01297 Zinc-uptake complex component A periplasmic DLK00_RS08635 PF00899 ThiF family DLK00_RS08720 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase DLK00_RS08735 PF00132 Bacterial transferase hexapeptide (six repeats) DLK00_RS08735 PF06426 Serine acetyltransferase, N-terminal DLK00_RS08745 PF00939 Sodium:sulfate symporter transmembrane region DLK00_RS08750 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DLK00_RS08750 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DLK00_RS08765 PF07690 Major Facilitator Superfamily DLK00_RS08770 PF00596 Class II Aldolase and Adducin N-terminal domain DLK00_RS08775 PF05025 RbsD / FucU transport protein family DLK00_RS08780 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DLK00_RS08780 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DLK00_RS08790 PF08220 DeoR-like helix-turn-helix domain DLK00_RS08790 PF00455 DeoR C terminal sensor domain DLK00_RS08795 PF18339 RapA N-terminal Tudor like domain 1 DLK00_RS08795 PF00271 Helicase conserved C-terminal domain DLK00_RS08795 PF04851 Type III restriction enzyme, res subunit DLK00_RS08795 PF12137 RNA polymerase recycling family C-terminal DLK00_RS08795 PF18337 RapA N-terminal Tudor like domain DLK00_RS08800 PF00849 RNA pseudouridylate synthase DLK00_RS08805 PF01694 Rhomboid family DLK00_RS08810 PF00455 DeoR C terminal sensor domain DLK00_RS08810 PF08220 DeoR-like helix-turn-helix domain DLK00_RS08815 PF03180 NLPA lipoprotein DLK00_RS08825 PF00005 ABC transporter DLK00_RS08825 PF09383 NIL domain DLK00_RS08865 PF02798 Glutathione S-transferase, N-terminal domain DLK00_RS08865 PF00043 Glutathione S-transferase, C-terminal domain DLK00_RS08870 PF02403 Seryl-tRNA synthetase N-terminal domain DLK00_RS08870 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DLK00_RS08880 PF06738 Putative threonine/serine exporter DLK00_RS08880 PF12821 Threonine/Serine exporter, ThrE DLK00_RS08885 PF01595 Cyclin M transmembrane N-terminal domain DLK00_RS08885 PF00571 CBS domain DLK00_RS08885 PF03471 Transporter associated domain DLK00_RS08890 PF02978 Signal peptide binding domain DLK00_RS08890 PF00448 SRP54-type protein, GTPase domain DLK00_RS08890 PF02881 SRP54-type protein, helical bundle domain DLK00_RS08905 PF12161 HsdM N-terminal domain DLK00_RS08905 PF02384 N-6 DNA Methylase DLK00_RS08910 PF01784 NIF3 (NGG1p interacting factor 3) DLK00_RS08915 PF00183 Hsp90 protein DLK00_RS08915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DLK00_RS08925 PF03960 ArsC family DLK00_RS08930 PF01546 Peptidase family M20/M25/M40 DLK00_RS08930 PF07687 Peptidase dimerisation domain DLK00_RS08935 PF02557 D-alanyl-D-alanine carboxypeptidase DLK00_RS08945 PF00528 Binding-protein-dependent transport system inner membrane component DLK00_RS08950 PF01547 Bacterial extracellular solute-binding protein DLK00_RS08960 PF01168 Alanine racemase, N-terminal domain DLK00_RS08965 PF03447 Homoserine dehydrogenase, NAD binding domain DLK00_RS08965 PF00742 Homoserine dehydrogenase DLK00_RS08965 PF13840 ACT domain DLK00_RS08965 PF01842 ACT domain DLK00_RS08965 PF00696 Amino acid kinase family DLK00_RS08970 PF08544 GHMP kinases C terminal DLK00_RS08970 PF00288 GHMP kinases N terminal domain DLK00_RS09000 PF01053 Cys/Met metabolism PLP-dependent enzyme DLK00_RS09010 PF00085 Thioredoxin DLK00_RS09020 PF01026 TatD related DNase DLK00_RS09030 PF01406 tRNA synthetases class I (C) catalytic domain DLK00_RS09030 PF09190 DALR domain DLK00_RS09035 PF04305 Protein of unknown function (DUF455) DLK00_RS09040 PF02551 Acyl-CoA thioesterase DLK00_RS09045 PF03477 ATP cone domain DLK00_RS09045 PF13597 Anaerobic ribonucleoside-triphosphate reductase DLK00_RS09055 PF17954 Quercetinase C-terminal cupin domain DLK00_RS09055 PF02678 Pirin DLK00_RS09090 PF10122 Mu-like prophage protein Com DLK00_RS09245 PF10883 Protein of unknown function (DUF2681) DLK00_RS09270 PF08765 Mor transcription activator family DLK00_RS09275 PF06252 Protein of unknown function (DUF1018) DLK00_RS09295 PF07352 Bacteriophage Mu Gam like protein DLK00_RS09310 PF09299 Mu transposase, C-terminal DLK00_RS09310 PF02914 Bacteriophage Mu transposase DLK00_RS09310 PF02316 Mu DNA-binding domain DLK00_RS09310 PF09039 Mu DNA binding, I gamma subdomain DLK00_RS09315 PF13693 Winged helix-turn-helix DNA-binding DLK00_RS09330 PF04224 Protein of unknown function, DUF417 DLK00_RS09335 PF01025 GrpE DLK00_RS09340 PF01513 ATP-NAD kinase DLK00_RS09345 PF02463 RecF/RecN/SMC N terminal domain DLK00_RS09365 PF01476 LysM domain DLK00_RS09365 PF01520 N-acetylmuramoyl-L-alanine amidase DLK00_RS09370 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DLK00_RS09375 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DLK00_RS09380 PF12627 Probable RNA and SrmB- binding site of polymerase A DLK00_RS09380 PF12626 Polymerase A arginine-rich C-terminus DLK00_RS09380 PF01743 Poly A polymerase head domain DLK00_RS09385 PF01258 Prokaryotic dksA/traR C4-type zinc finger DLK00_RS09390 PF03772 Competence protein DLK00_RS09390 PF00753 Metallo-beta-lactamase superfamily DLK00_RS09390 PF13567 Domain of unknown function (DUF4131) DLK00_RS09395 PF00664 ABC transporter transmembrane region DLK00_RS09395 PF00005 ABC transporter DLK00_RS09400 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DLK00_RS09405 PF02348 Cytidylyltransferase DLK00_RS09410 PF01541 GIY-YIG catalytic domain DLK00_RS09410 PF02151 UvrB/uvrC motif DLK00_RS09410 PF08459 UvrC Helix-hairpin-helix N-terminal DLK00_RS09420 PF03786 D-mannonate dehydratase (UxuA) DLK00_RS09425 PF00392 Bacterial regulatory proteins, gntR family DLK00_RS09425 PF07729 FCD domain DLK00_RS09435 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DLK00_RS09440 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DLK00_RS09445 PF03480 Bacterial extracellular solute-binding protein, family 7 DLK00_RS09465 PF01081 KDPG and KHG aldolase DLK00_RS09470 PF03831 PhnA domain DLK00_RS09470 PF08274 PhnA Zinc-Ribbon DLK00_RS09475 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) DLK00_RS09485 PF01027 Inhibitor of apoptosis-promoting Bax1 DLK00_RS09490 PF05128 Domain of unknown function (DUF697) DLK00_RS09510 PF04093 rod shape-determining protein MreD DLK00_RS09515 PF04085 rod shape-determining protein MreC DLK00_RS09540 PF02590 Predicted SPOUT methyltransferase DLK00_RS09545 PF00905 Penicillin binding protein transpeptidase domain DLK00_RS09545 PF03717 Penicillin-binding Protein dimerisation domain DLK00_RS09550 PF01098 Cell cycle protein DLK00_RS09555 PF05036 Sporulation related domain DLK00_RS09555 PF03330 Lytic transglycolase DLK00_RS09560 PF07943 Penicillin-binding protein 5, C-terminal domain DLK00_RS09560 PF00768 D-alanyl-D-alanine carboxypeptidase DLK00_RS09565 PF04359 Protein of unknown function (DUF493) DLK00_RS09570 PF03099 Biotin/lipoate A/B protein ligase family DLK00_RS09575 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DLK00_RS09575 PF04055 Radical SAM superfamily DLK00_RS09580 PF08218 Citrate lyase ligase C-terminal domain DLK00_RS09585 PF06857 Malonate decarboxylase delta subunit (MdcD) DLK00_RS09590 PF03328 HpcH/HpaI aldolase/citrate lyase family DLK00_RS09600 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase DLK00_RS09600 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase DLK00_RS09605 PF00939 Sodium:sulfate symporter transmembrane region DLK00_RS09610 PF04055 Radical SAM superfamily DLK00_RS09610 PF00919 Uncharacterized protein family UPF0004 DLK00_RS09610 PF01938 TRAM domain DLK00_RS09615 PF03167 Uracil DNA glycosylase superfamily DLK00_RS09620 PF01228 Glycine radical DLK00_RS09625 PF00009 Elongation factor Tu GTP binding domain DLK00_RS09625 PF00679 Elongation factor G C-terminus DLK00_RS09625 PF03144 Elongation factor Tu domain 2 DLK00_RS09625 PF06421 GTP-binding protein LepA C-terminus DLK00_RS09635 PF00035 Double-stranded RNA binding motif DLK00_RS09635 PF14622 Ribonuclease-III-like DLK00_RS09640 PF07650 KH domain DLK00_RS09640 PF01926 50S ribosome-binding GTPase DLK00_RS09645 PF05175 Methyltransferase small domain DLK00_RS09645 PF08468 Methyltransferase small domain N-terminal DLK00_RS09650 PF03603 DNA polymerase III psi subunit DLK00_RS09655 PF00583 Acetyltransferase (GNAT) family DLK00_RS09660 PF04216 Protein involved in formate dehydrogenase formation DLK00_RS09670 PF13247 4Fe-4S dicluster domain DLK00_RS09670 PF09163 Formate dehydrogenase N, transmembrane DLK00_RS09675 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DLK00_RS09675 PF01568 Molydopterin dinucleotide binding domain DLK00_RS09675 PF00384 Molybdopterin oxidoreductase DLK00_RS09680 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DLK00_RS09680 PF00384 Molybdopterin oxidoreductase DLK00_RS09680 PF01568 Molydopterin dinucleotide binding domain DLK00_RS09685 PF02634 FdhD/NarQ family DLK00_RS09690 PF02130 Uncharacterized protein family UPF0054 DLK00_RS09705 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DLK00_RS09705 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DLK00_RS09710 PF00625 Guanylate kinase DLK00_RS09715 PF01192 RNA polymerase Rpb6 DLK00_RS09720 PF13291 ACT domain DLK00_RS09720 PF02824 TGS domain DLK00_RS09720 PF04607 Region found in RelA / SpoT proteins DLK00_RS09730 PF01177 Asp/Glu/Hydantoin racemase DLK00_RS09780 PF03591 AzlC protein DLK00_RS09785 PF05437 Branched-chain amino acid transport protein (AzlD) DLK00_RS09790 PF10688 Bacterial inner membrane protein DLK00_RS09805 PF08206 Ribonuclease B OB domain DLK00_RS09805 PF00773 RNB domain DLK00_RS09805 PF00575 S1 RNA binding domain DLK00_RS09835 PF00764 Arginosuccinate synthase DLK00_RS09850 PF06062 Uncharacterised protein family (UPF0231) DLK00_RS09860 PF00557 Metallopeptidase family M24 DLK00_RS09880 PF00929 Exonuclease DLK00_RS09885 PF03193 RsgA GTPase DLK00_RS09890 PF00381 PTS HPr component phosphorylation site DLK00_RS09895 PF05524 PEP-utilising enzyme, N-terminal DLK00_RS09895 PF00391 PEP-utilising enzyme, mobile domain DLK00_RS09895 PF02896 PEP-utilising enzyme, TIM barrel domain DLK00_RS09900 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DLK00_RS09910 PF04076 Bacterial OB fold (BOF) protein DLK00_RS09915 PF00072 Response regulator receiver domain DLK00_RS09915 PF00486 Transcriptional regulatory protein, C terminal DLK00_RS09925 PF02028 BCCT, betaine/carnitine/choline family transporter DLK00_RS09935 PF03739 Lipopolysaccharide export system permease LptF/LptG DLK00_RS09945 PF08267 Cobalamin-independent synthase, N-terminal domain DLK00_RS09945 PF01717 Cobalamin-independent synthase, Catalytic domain DLK00_RS09950 PF02698 DUF218 domain DLK00_RS09960 PF07922 Glycosyltransferase family 52 DLK00_RS09970 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) DLK00_RS09980 PF00535 Glycosyl transferase family 2 DLK00_RS09985 PF03459 TOBE domain DLK00_RS09985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLK00_RS10000 PF03459 TOBE domain DLK00_RS10000 PF00005 ABC transporter DLK00_RS10010 PF00633 Helix-hairpin-helix motif DLK00_RS10010 PF00730 HhH-GPD superfamily base excision DNA repair protein DLK00_RS10010 PF10576 Iron-sulfur binding domain of endonuclease III DLK00_RS10015 PF02508 Rnf-Nqr subunit, membrane protein DLK00_RS10025 PF03116 NQR2, RnfD, RnfE family DLK00_RS10030 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DLK00_RS10030 PF12838 4Fe-4S dicluster domain DLK00_RS10030 PF13375 RnfC Barrel sandwich hybrid domain DLK00_RS10030 PF10531 SLBB domain DLK00_RS10035 PF04060 Putative Fe-S cluster DLK00_RS10040 PF02508 Rnf-Nqr subunit, membrane protein DLK00_RS10045 PF08496 Peptidase family S49 N-terminal DLK00_RS10045 PF01343 Peptidase family S49 DLK00_RS10050 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) DLK00_RS10055 PF12805 FUSC-like inner membrane protein yccS DLK00_RS10075 PF01928 CYTH domain DLK00_RS10080 PF18073 Rubredoxin metal binding domain DLK00_RS10085 PF01037 Lrp/AsnC ligand binding domain DLK00_RS10095 PF03548 Outer membrane lipoprotein carrier protein LolA DLK00_RS10110 PF01842 ACT domain DLK00_RS10110 PF00551 Formyl transferase DLK00_RS10115 PF00816 H-NS histone family DLK00_RS10135 PF10369 Small subunit of acetolactate synthase DLK00_RS10150 PF06185 YecM protein DLK00_RS10160 PF05433 Glycine zipper 2TM domain DLK00_RS10165 PF00535 Glycosyl transferase family 2 DLK00_RS10175 PF00342 Phosphoglucose isomerase DLK00_RS10180 PF01168 Alanine racemase, N-terminal domain DLK00_RS10180 PF00842 Alanine racemase, C-terminal domain DLK00_RS10185 PF00772 DnaB-like helicase N terminal domain DLK00_RS10185 PF03796 DnaB-like helicase C terminal domain DLK00_RS10190 PF02887 Pyruvate kinase, alpha/beta domain DLK00_RS10190 PF00224 Pyruvate kinase, barrel domain DLK00_RS10200 PF00589 Phage integrase family DLK00_RS10210 PF06074 Protein of unknown function (DUF935) DLK00_RS10220 PF05069 Phage virion morphogenesis family DLK00_RS10245 PF04315 Elongation factor P hydroxylase DLK00_RS10250 PF00472 RF-1 domain DLK00_RS10250 PF03462 PCRF domain DLK00_RS10260 PF17827 PrmC N-terminal domain DLK00_RS10260 PF13847 Methyltransferase domain DLK00_RS10265 PF13369 Transglutaminase-like superfamily DLK00_RS10275 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DLK00_RS10275 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DLK00_RS10280 PF02687 FtsX-like permease family DLK00_RS10280 PF12704 MacB-like periplasmic core domain DLK00_RS10285 PF00202 Aminotransferase class-III DLK00_RS10295 PF04301 Protein of unknown function (DUF452) DLK00_RS10300 PF08241 Methyltransferase domain DLK00_RS10310 PF00005 ABC transporter DLK00_RS10325 PF00717 Peptidase S24-like DLK00_RS10330 PF00375 Sodium:dicarboxylate symporter family DLK00_RS10335 PF02525 Flavodoxin-like fold DLK00_RS10345 PF00881 Nitroreductase family DLK00_RS10355 PF04991 LicD family DLK00_RS10360 PF12804 MobA-like NTP transferase domain DLK00_RS10380 PF02801 Beta-ketoacyl synthase, C-terminal domain DLK00_RS10380 PF00109 Beta-ketoacyl synthase, N-terminal domain DLK00_RS10385 PF00462 Glutaredoxin DLK00_RS10390 PF18030 RimK PreATP-grasp domain DLK00_RS10390 PF08443 RimK-like ATP-grasp domain DLK00_RS10395 PF03616 Sodium/glutamate symporter DLK00_RS10405 PF01751 Toprim domain DLK00_RS10405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DLK00_RS10405 PF00986 DNA gyrase B subunit, carboxyl terminus DLK00_RS10405 PF00204 DNA gyrase B DLK00_RS10410 PF03279 Bacterial lipid A biosynthesis acyltransferase DLK00_RS10415 PF01467 Cytidylyltransferase-like DLK00_RS10415 PF00294 pfkB family carbohydrate kinase DLK00_RS10435 PF16326 ABC transporter C-terminal domain DLK00_RS10435 PF00005 ABC transporter DLK00_RS10435 PF12848 ABC transporter DLK00_RS10440 PF13416 Bacterial extracellular solute-binding protein DLK00_RS10445 PF00528 Binding-protein-dependent transport system inner membrane component DLK00_RS10450 PF00528 Binding-protein-dependent transport system inner membrane component DLK00_RS10465 PF00210 Ferritin-like domain DLK00_RS10470 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region DLK00_RS10470 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DLK00_RS10475 PF08003 Protein of unknown function (DUF1698) DLK00_RS10490 PF00749 tRNA synthetases class I (E and Q), catalytic domain DLK00_RS10490 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DLK00_RS10495 PF03692 Putative zinc- or iron-chelating domain DLK00_RS10515 PF00483 Nucleotidyl transferase DLK00_RS10520 PF00534 Glycosyl transferases group 1 DLK00_RS10520 PF08323 Starch synthase catalytic domain DLK00_RS10525 PF00343 Carbohydrate phosphorylase DLK00_RS10530 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DLK00_RS10530 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DLK00_RS10530 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DLK00_RS10535 PF02233 NAD(P) transhydrogenase beta subunit DLK00_RS10540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DLK00_RS10540 PF03466 LysR substrate binding domain DLK00_RS10545 PF01396 Topoisomerase DNA binding C4 zinc finger DLK00_RS10545 PF01751 Toprim domain DLK00_RS10545 PF01131 DNA topoisomerase DLK00_RS10545 PF08272 Topoisomerase I zinc-ribbon-like DLK00_RS10550 PF02525 Flavodoxin-like fold DLK00_RS10555 PF03129 Anticodon binding domain DLK00_RS10555 PF02824 TGS domain DLK00_RS10555 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DLK00_RS10555 PF00587 tRNA synthetase class II core domain (G, H, P, S and T)