locus-tag class description HI0001 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HI0001 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HI0002 PF00501 AMP-binding enzyme HI0004 PF02130 Uncharacterized protein family UPF0054 HI0005 PF02634 FdhD/NarQ family HI0007 PF13247 4Fe-4S dicluster domain HI0007 PF09163 Formate dehydrogenase N, transmembrane HI0008 PF01292 Prokaryotic cytochrome b561 HI0009 PF04216 Protein involved in formate dehydrogenase formation HI0010 PF00583 Acetyltransferase (GNAT) family HI0011 PF03603 DNA polymerase III psi subunit HI0012 PF08468 Methyltransferase small domain N-terminal HI0012 PF05175 Methyltransferase small domain HI0013 PF07650 KH domain HI0013 PF01926 50S ribosome-binding GTPase HI0014 PF14622 Ribonuclease-III-like HI0014 PF00035 Double-stranded RNA binding motif HI0015 PF10502 Signal peptidase, peptidase S26 HI0016 PF00009 Elongation factor Tu GTP binding domain HI0016 PF00679 Elongation factor G C-terminus HI0016 PF06421 GTP-binding protein LepA C-terminus HI0016 PF03144 Elongation factor Tu domain 2 HI0017 PF01228 Glycine radical HI0018 PF03167 Uracil DNA glycosylase superfamily HI0019 PF00919 Uncharacterized protein family UPF0004 HI0019 PF01938 TRAM domain HI0019 PF04055 Radical SAM superfamily HI0020 PF00939 Sodium:sulfate symporter transmembrane region HI0021 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase HI0021 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase HI0022 PF04223 Citrate lyase, alpha subunit (CitF) HI0023 PF03328 HpcH/HpaI aldolase/citrate lyase family HI0024 PF06857 Malonate decarboxylase delta subunit (MdcD) HI0025 PF08218 Citrate lyase ligase C-terminal domain HI0026 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family HI0026 PF04055 Radical SAM superfamily HI0027 PF03099 Biotin/lipoate A/B protein ligase family HI0028 PF04359 Protein of unknown function (DUF493) HI0029 PF00768 D-alanyl-D-alanine carboxypeptidase HI0029 PF07943 Penicillin-binding protein 5, C-terminal domain HI0030 PF03330 Lytic transglycolase HI0030 PF05036 Sporulation related domain HI0031 PF01098 Cell cycle protein HI0032 PF00905 Penicillin binding protein transpeptidase domain HI0032 PF03717 Penicillin-binding Protein dimerisation domain HI0033 PF02590 Predicted SPOUT methyltransferase HI0035 PF02080 TrkA-C domain HI0035 PF06826 Predicted Permease Membrane Region HI0036 PF06472 ABC transporter transmembrane region 2 HI0036 PF00005 ABC transporter HI0038 PF04085 rod shape-determining protein MreC HI0039 PF04093 rod shape-determining protein MreD HI0040 PF05117 Family of unknown function (DUF695) HI0040 PF06877 Regulator of ribonuclease activity B HI0041 PF03372 Endonuclease/Exonuclease/phosphatase family HI0042 PF00849 RNA pseudouridylate synthase HI0043 PF05128 Domain of unknown function (DUF697) HI0044 PF01027 Inhibitor of apoptosis-promoting Bax1 HI0045 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) HI0046 PF08274 PhnA Zinc-Ribbon HI0046 PF03831 PhnA domain HI0047 PF01081 KDPG and KHG aldolase HI0048 PF00106 short chain dehydrogenase HI0049 PF00294 pfkB family carbohydrate kinase HI0050m PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HI0051 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HI0052 PF03480 Bacterial extracellular solute-binding protein, family 7 HI0053 PF08240 Alcohol dehydrogenase GroES-like domain HI0053 PF00107 Zinc-binding dehydrogenase HI0054 PF07729 FCD domain HI0054 PF00392 Bacterial regulatory proteins, gntR family HI0055 PF03786 D-mannonate dehydratase (UxuA) HI0056 PF03741 Integral membrane protein TerC family HI0057 PF02151 UvrB/uvrC motif HI0057 PF01541 GIY-YIG catalytic domain HI0057 PF08459 UvrC Helix-hairpin-helix N-terminal HI0058 PF02348 Cytidylyltransferase HI0059 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HI0060 PF00005 ABC transporter HI0060 PF00664 ABC transporter transmembrane region HI0061 PF03772 Competence protein HI0061 PF13567 Domain of unknown function (DUF4131) HI0061 PF00753 Metallo-beta-lactamase superfamily HI0062 PF01258 Prokaryotic dksA/traR C4-type zinc finger HI0063 PF12626 Polymerase A arginine-rich C-terminus HI0063 PF12627 Probable RNA and SrmB- binding site of polymerase A HI0063 PF01743 Poly A polymerase head domain HI0064 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HI0065 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HI0066 PF01520 N-acetylmuramoyl-L-alanine amidase HI0066 PF01476 LysM domain HI0067 PF01119 DNA mismatch repair protein, C-terminal domain HI0067 PF08676 MutL C terminal dimerisation domain HI0069 PF03710 Glutamate-ammonia ligase adenylyltransferase HI0069 PF08335 GlnD PII-uridylyltransferase HI0070 PF02463 RecF/RecN/SMC N terminal domain HI0071 PF01025 GrpE HI0072 PF01513 ATP-NAD kinase HI0073 PF01909 Nucleotidyltransferase domain HI0074 PF08780 Nucleotidyltransferase substrate binding protein like HI0075 PF13597 Anaerobic ribonucleoside-triphosphate reductase HI0075 PF03477 ATP cone domain HI0076 PF02551 Acyl-CoA thioesterase HI0077 PF04305 Protein of unknown function (DUF455) HI0078 PF09190 DALR domain HI0078 PF01406 tRNA synthetases class I (C) catalytic domain HI0079 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HI0080 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system HI0081 PF01026 TatD related DNase HI0084 PF00085 Thioredoxin HI0085 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HI0085 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HI0086 PF01053 Cys/Met metabolism PLP-dependent enzyme HI0087 PF14821 Threonine synthase N terminus HI0087 PF00291 Pyridoxal-phosphate dependent enzyme HI0088 PF00288 GHMP kinases N terminal domain HI0088 PF08544 GHMP kinases C terminal HI0089 PF13840 ACT domain HI0089 PF03447 Homoserine dehydrogenase, NAD binding domain HI0089 PF00696 Amino acid kinase family HI0089 PF01842 ACT domain HI0089 PF00742 Homoserine dehydrogenase HI0090 PF01168 Alanine racemase, N-terminal domain HI0091 PF02595 Glycerate kinase family HI0092 PF02447 GntP family permease HI0093 PF05651 Putative sugar diacid recognition HI0093 PF17853 GGDEF-like domain HI0093 PF13556 PucR C-terminal helix-turn-helix domain HI0094 PF02447 GntP family permease HI0095 PF13649 Methyltransferase domain HI0098 PF00528 Binding-protein-dependent transport system inner membrane component HI0099 PF00005 ABC transporter HI0102 PF07687 Peptidase dimerisation domain HI0102 PF01546 Peptidase family M20/M25/M40 HI0103 PF03960 ArsC family HI0104 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HI0104 PF00183 Hsp90 protein HI0105 PF01784 NIF3 (NGG1p interacting factor 3) HI0106 PF02881 SRP54-type protein, helical bundle domain HI0106 PF00448 SRP54-type protein, GTPase domain HI0106 PF02978 Signal peptide binding domain HI0107 PF00571 CBS domain HI0107 PF03471 Transporter associated domain HI0107 PF01595 Cyclin M transmembrane N-terminal domain HI0108 PF06738 Putative threonine/serine exporter HI0108 PF12821 Threonine/Serine exporter, ThrE HI0110 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HI0110 PF02403 Seryl-tRNA synthetase N-terminal domain HI0111 PF02798 Glutathione S-transferase, N-terminal domain HI0111 PF00043 Glutathione S-transferase, C-terminal domain HI0113 PF00593 TonB dependent receptor HI0113 PF07715 TonB-dependent Receptor Plug Domain HI0117 PF03562 MltA specific insert domain HI0117 PF06725 3D domain HI0118 PF00899 ThiF family HI0119 PF01297 Zinc-uptake complex component A periplasmic HI0120 PF10063 Uncharacterized integral membrane protein (DUF2301) HI0121 PF01225 Mur ligase family, catalytic domain HI0121 PF02875 Mur ligase family, glutamate ligase domain HI0121 PF08245 Mur ligase middle domain HI0122 PF01053 Cys/Met metabolism PLP-dependent enzyme HI0123 PF01066 CDP-alcohol phosphatidyltransferase HI0124 PF00719 Inorganic pyrophosphatase HI0125 PF00860 Permease family HI0126 PF00005 ABC transporter HI0129 PF00528 Binding-protein-dependent transport system inner membrane component HI0132 PF00485 Phosphoribulokinase / Uridine kinase family HI0133 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) HI0135 PF07690 Major Facilitator Superfamily HI0136 PF01926 50S ribosome-binding GTPase HI0136 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HI0137 PF00929 Exonuclease HI0138 PF00075 RNase H HI0139 PF13609 Gram-negative porin HI0140 PF01979 Amidohydrolase family HI0141 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HI0142 PF00701 Dihydrodipicolinate synthetase family HI0143 PF01380 SIS domain HI0143 PF01418 Helix-turn-helix domain, rpiR family HI0144 PF00480 ROK family HI0145 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase HI0146 PF03480 Bacterial extracellular solute-binding protein, family 7 HI0147 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HI0147 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HI0148 PF01344 Kelch motif HI0150 PF01145 SPFH domain / Band 7 family HI0151 PF01145 SPFH domain / Band 7 family HI0152 PF01648 4'-phosphopantetheinyl transferase superfamily HI0154 PF00550 Phosphopantetheine attachment site HI0156 PF00698 Acyl transferase domain HI0157 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HI0157 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HI0158 PF01783 Ribosomal L32p protein family HI0159 PF02620 Large ribosomal RNA subunit accumulation protein YceD HI0160 PF02666 Phosphatidylserine decarboxylase HI0161 PF07992 Pyridine nucleotide-disulphide oxidoreductase HI0161 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HI0162 PF03923 Uncharacterized lipoprotein HI0163 PF01722 BolA-like protein HI0164 PF11973 NQRA C-terminal domain HI0164 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) HI0166 PF03116 NQR2, RnfD, RnfE family HI0167 PF04205 FMN-binding domain HI0168 PF02508 Rnf-Nqr subunit, membrane protein HI0170 PF02508 Rnf-Nqr subunit, membrane protein HI0171 PF00175 Oxidoreductase NAD-binding domain HI0171 PF00111 2Fe-2S iron-sulfur cluster binding domain HI0171 PF00970 Oxidoreductase FAD-binding domain HI0172 PF02424 ApbE family HI0173 PF04400 (Na+)-NQR maturation NqrM HI0175 PF02578 Multi-copper polyphenol oxidoreductase laccase HI0176 PF00849 RNA pseudouridylate synthase HI0176 PF01479 S4 domain HI0177 PF13525 Outer membrane lipoprotein HI0178 PF16747 Surface-adhesin protein E HI0179 PF04055 Radical SAM superfamily HI0180 PF02901 Pyruvate formate lyase-like HI0180 PF01228 Glycine radical HI0181 PF01226 Formate/nitrite transporter HI0182 PF00480 ROK family HI0183 PF01235 Sodium:alanine symporter family HI0184 PF00756 Putative esterase HI0185 PF08240 Alcohol dehydrogenase GroES-like domain HI0185 PF00107 Zinc-binding dehydrogenase HI0186 PF13411 MerR HTH family regulatory protein HI0187a PF02416 mttA/Hcf106 family HI0188 PF00902 Sec-independent protein translocase protein (TatC) HI0189 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HI0189 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HI0190 PF01475 Ferric uptake regulator family HI0191 PF00258 Flavodoxin HI0192 PF03925 SeqA protein C-terminal domain HI0192 PF17206 SeqA protein N-terminal domain HI0193 PF00561 alpha/beta hydrolase fold HI0194 PF00501 AMP-binding enzyme HI0195.1 PF12794 Mechanosensitive ion channel inner membrane domain 1 HI0195.1 PF12795 Mechanosensitive ion channel porin domain HI0195.1 PF00924 Mechanosensitive ion channel HI0196 PF01264 Chorismate synthase HI0197 PF03411 Penicillin-insensitive murein endopeptidase HI0198 PF01925 Sulfite exporter TauE/SafE HI0199 PF03279 Bacterial lipid A biosynthesis acyltransferase HI0201 PF01245 Ribosomal protein L19 HI0202 PF01746 tRNA (Guanine-1)-methyltransferase HI0203 PF01782 RimM N-terminal domain HI0203 PF05239 PRC-barrel domain HI0204 PF00886 Ribosomal protein S16 HI0206 PF00149 Calcineurin-like phosphoesterase HI0206 PF02872 5'-nucleotidase, C-terminal domain HI0207 PF01202 Shikimate kinase HI0208 PF01761 3-dehydroquinate synthase HI0209 PF02086 D12 class N6 adenine-specific DNA methyltransferase HI0211 PF01569 PAP2 superfamily HI0212 PF00925 GTP cyclohydrolase II HI0213 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HI0214 PF01432 Peptidase family M3 HI0216 PF01420 Type I restriction modification DNA specificity domain HI0217 PF01797 Transposase IS200 like HI0219 PF04224 Protein of unknown function, DUF417 HI0219a PF00512 His Kinase A (phospho-acceptor) domain HI0219a PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HI0219a PF18415 Histidine kinase receptor ArcB trans-membrane domain HI0219a PF00072 Response regulator receiver domain HI0219a PF00989 PAS fold HI0219a PF01627 Hpt domain HI0220.1 PF02237 Biotin protein ligase C terminal domain HI0220.1 PF03099 Biotin/lipoate A/B protein ligase family HI0220.2 PF03167 Uracil DNA glycosylase superfamily HI0221 PF00571 CBS domain HI0221 PF00478 IMP dehydrogenase / GMP reductase domain HI0221.1 PF00478 IMP dehydrogenase / GMP reductase domain HI0222 PF02540 NAD synthase HI0222 PF00958 GMP synthase C terminal domain HI0222 PF00117 Glutamine amidotransferase class-I HI0223 PF00892 EamA-like transporter family HI0224 PF01037 Lrp/AsnC ligand binding domain HI0225 PF06965 Na+/H+ antiporter 1 HI0226 PF05525 Branched-chain amino acid transport protein HI0227 PF04074 YhcH/YjgK/YiaL HI0229 PF00013 KH domain HI0229 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HI0229 PF01138 3' exoribonuclease family, domain 1 HI0229 PF00575 S1 RNA binding domain HI0229 PF03725 3' exoribonuclease family, domain 2 HI0231 PF03880 DbpA RNA binding domain HI0231 PF00270 DEAD/DEAH box helicase HI0231 PF00271 Helicase conserved C-terminal domain HI0232 PF01464 Transglycosylase SLT domain HI0232 PF00497 Bacterial extracellular solute-binding proteins, family 3 HI0235 PF03889 Alternative ribosome-rescue factor A HI0236 PF03960 ArsC family HI0239 PF02355 Protein export membrane protein HI0239 PF07549 SecD/SecF GG Motif HI0240 PF13721 SecD export protein N-terminal TM region HI0240 PF02355 Protein export membrane protein HI0240 PF07549 SecD/SecF GG Motif HI0241 PF02699 Preprotein translocase subunit HI0242 PF01206 Sulfurtransferase TusA HI0243 PF01814 Hemerythrin HHE cation binding domain HI0244 PF01702 Queuine tRNA-ribosyltransferase HI0245 PF02547 Queuosine biosynthesis protein HI0249 PF17760 UvrA interaction domain HI0249 PF17755 UvrA DNA-binding domain HI0250 PF00436 Single-strand binding protein family HI0251 PF03544 Gram-negative bacterial TonB protein C-terminal HI0252 PF02472 Biopolymer transport protein ExbD/TolR HI0253 PF01618 MotA/TolQ/ExbB proton channel family HI0254 PF00578 AhpC/TSA family HI0255 PF00701 Dihydrodipicolinate synthetase family HI0256 PF06804 NlpB/DapX lipoprotein HI0257 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HI0258 PF01501 Glycosyl transferase family 8 HI0260 PF01725 Ham1 family HI0261 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HI0262 PF07715 TonB-dependent Receptor Plug Domain HI0262 PF00593 TonB dependent receptor HI0263 PF08479 POTRA domain, ShlB-type HI0263 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB HI0264 PF05860 haemagglutination activity domain HI0265 PF02152 Dihydroneopterin aldolase HI0266 PF02660 Glycerol-3-phosphate acyltransferase HI0267 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HI0267 PF00672 HAMP domain HI0267 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HI0267 PF07730 Histidine kinase HI0268 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HI0268 PF01565 FAD binding domain HI0269 PF00140 Sigma-70 factor, region 1.2 HI0269 PF04545 Sigma-70, region 4 HI0269 PF04542 Sigma-70 region 2 HI0270 PF01207 Dihydrouridine synthase (Dus) HI0271 PF00226 DnaJ domain HI0271 PF05099 Tellurite resistance protein TerB HI0272 PF00156 Phosphoribosyl transferase domain HI0273 PF03725 3' exoribonuclease family, domain 2 HI0273 PF01138 3' exoribonuclease family, domain 1 HI0274 PF00749 tRNA synthetases class I (E and Q), catalytic domain HI0275 PF00884 Sulfatase HI0276 PF03631 Virulence factor BrkB HI0277 PF02810 SEC-C motif HI0280 PF01048 Phosphorylase superfamily HI0281 PF07690 Major Facilitator Superfamily HI0282 PF00561 alpha/beta hydrolase fold HI0283 PF16582 Middle domain of thiamine pyrophosphate HI0283 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HI0283 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HI0285 PF00425 chorismate binding enzyme HI0286 PF00155 Aminotransferase class I and II HI0287 PF03222 Tryptophan/tyrosine permease family HI0288 PF03313 Serine dehydratase alpha chain HI0288 PF03315 Serine dehydratase beta chain HI0289 PF03222 Tryptophan/tyrosine permease family HI0290 PF00403 Heavy-metal-associated domain HI0291 PF00403 Heavy-metal-associated domain HI0292 PF00403 Heavy-metal-associated domain HI0293 PF00376 MerR family regulatory protein HI0293 PF09278 MerR, DNA binding HI0294 PF01340 Met Apo-repressor, MetJ HI0295 PF07498 Rho termination factor, N-terminal domain HI0295 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HI0295 PF07497 Rho termination factor, RNA-binding domain HI0296 PF01478 Type IV leader peptidase family HI0297 PF00482 Type II secretion system (T2SS), protein F HI0298 PF00437 Type II/IV secretion system protein HI0298 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HI0299 PF07963 Prokaryotic N-terminal methylation motif HI0300 PF01510 N-acetylmuramoyl-L-alanine amidase HI0301 PF03471 Transporter associated domain HI0301 PF00571 CBS domain HI0302 PF00795 Carbon-nitrogen hydrolase HI0303 PF04452 RNA methyltransferase HI0304 PF02622 Uncharacterized ACR, COG1678 HI0305 PF03652 Holliday junction resolvase HI0306 PF04381 Putative exonuclease, RdgC HI0307 PF14748 Pyrroline-5-carboxylate reductase dimerisation HI0307 PF03807 NADP oxidoreductase coenzyme F420-dependent HI0308 PF12832 MFS_1 like family HI0309 PF00589 Phage integrase family HI0309 PF02899 Phage integrase, N-terminal SAM-like domain HI0310 PF17274 Family of unknown function (DUF5339) HI0312 PF05496 Holliday junction DNA helicase RuvB P-loop domain HI0312 PF17864 RuvB AAA lid domain HI0312 PF05491 RuvB C-terminal winged helix domain HI0313 PF07499 RuvA, C-terminal domain HI0313 PF01330 RuvA N terminal domain HI0314 PF02075 Crossover junction endodeoxyribonuclease RuvC HI0315 PF01709 Transcriptional regulator HI0316 PF00293 NUDIX domain HI0317 PF01336 OB-fold nucleic acid binding domain HI0317 PF00152 tRNA synthetases class II (D, K and N) HI0317 PF02938 GAD domain HI0318 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family HI0319 PF13649 Methyltransferase domain HI0321 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HI0322 PF01850 PIN domain HI0323 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HI0324 PF00929 Exonuclease HI0325 PF13726 Na+-H+ antiporter family HI0325 PF03553 Na+/H+ antiporter family HI0328 PF09285 Elongation factor P, C-terminal HI0328 PF01132 Elongation factor P (EF-P) OB domain HI0328 PF08207 Elongation factor P (EF-P) KOW-like domain HI0329 PF04055 Radical SAM superfamily HI0330 PF04225 Opacity-associated protein A LysM-like domain HI0330 PF08525 Opacity-associated protein A N-terminal motif HI0331 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme HI0332 PF02565 Recombination protein O C terminal HI0332 PF11967 Recombination protein O N terminal HI0333 PF05958 tRNA (Uracil-5-)-methyltransferase HI0333 PF01938 TRAM domain HI0334 PF13291 ACT domain HI0334 PF04607 Region found in RelA / SpoT proteins HI0334 PF02824 TGS domain HI0335 PF01219 Prokaryotic diacylglycerol kinase HI0336 PF00994 Probable molybdopterin binding domain HI0337 PF00543 Nitrogen regulatory protein P-II HI0338 PF01594 AI-2E family transporter HI0339 PF17764 3′ DNA-binding domain (3′BD) HI0339 PF00271 Helicase conserved C-terminal domain HI0339 PF00270 DEAD/DEAH box helicase HI0339 PF18074 Primosomal protein N C-terminal domain HI0339 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HI0340 PF02390 Putative methyltransferase HI0341 PF04320 Protein with unknown function (DUF469) HI0343 PF03927 NapD protein HI0345 PF12800 4Fe-4S binding domain HI0345 PF12838 4Fe-4S dicluster domain HI0346 PF12801 4Fe-4S binding domain HI0346 PF12837 4Fe-4S binding domain HI0347 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) HI0348 PF03264 NapC/NirT cytochrome c family, N-terminal region HI0349 PF05191 Adenylate kinase, active site lid HI0350 PF07690 Major Facilitator Superfamily HI0351 PF01370 NAD dependent epimerase/dehydratase family HI0352 PF06002 Alpha-2,3-sialyltransferase (CST-I) HI0354 PF00005 ABC transporter HI0355 PF00528 Binding-protein-dependent transport system inner membrane component HI0357 PF09084 NMT1/THI5 like HI0358 PF03070 TENA/THI-4/PQQC family HI0359 PF00950 ABC 3 transport family HI0360 PF00950 ABC 3 transport family HI0361 PF00005 ABC transporter HI0362 PF01297 Zinc-uptake complex component A periplasmic HI0364 PF00768 D-alanyl-D-alanine carboxypeptidase HI0365 PF04055 Radical SAM superfamily HI0367 PF13464 Domain of unknown function (DUF4115) HI0368 PF04551 GcpE protein HI0369 PF03129 Anticodon binding domain HI0369 PF13393 Histidyl-tRNA synthetase HI0370 PF09976 Tetratricopeptide repeat-like domain HI0371 PF04384 Iron-sulphur cluster assembly HI0372 PF00111 2Fe-2S iron-sulfur cluster binding domain HI0373 PF00012 Hsp70 protein HI0374 PF10946 Protein of unknown function DUF2625 HI0375 PF07743 HSCB C-terminal oligomerisation domain HI0376 PF01521 Iron-sulphur cluster biosynthesis HI0377 PF01592 NifU-like N terminal domain HI0378 PF00266 Aminotransferase class-V HI0379 PF02082 Transcriptional regulator HI0380 PF00588 SpoU rRNA Methylase family HI0381 PF00691 OmpA family HI0382 PF07676 WD40-like Beta Propeller Repeat HI0382 PF04052 TolB amino-terminal domain HI0383 PF06519 TolA C-terminal HI0384 PF02472 Biopolymer transport protein ExbD/TolR HI0385 PF01618 MotA/TolQ/ExbB proton channel family HI0386 PF03061 Thioesterase superfamily HI0387 PF06733 DEAD_2 HI0387 PF13307 Helicase C-terminal domain HI0388 PF00814 Glycoprotease family HI0389 PF03843 Outer membrane lipoprotein Slp family HI0390 PF01612 3'-5' exonuclease HI0390 PF00570 HRDC domain HI0390.1 PF13193 AMP-binding enzyme C-terminal domain HI0390.1 PF00501 AMP-binding enzyme HI0393 PF01926 50S ribosome-binding GTPase HI0393 PF06071 Protein of unknown function (DUF933) HI0394 PF01195 Peptidyl-tRNA hydrolase HI0395 PF03658 RnfH family Ubiquitin HI0396 PF08007 Cupin superfamily protein HI0397 PF13742 OB-fold nucleic acid binding domain HI0397 PF02601 Exonuclease VII, large subunit HI0398 PF00293 NUDIX domain HI0399 PF00149 Calcineurin-like phosphoesterase HI0400 PF04175 Protein of unknown function (DUF406) HI0401 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HI0402 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HI0402 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HI0403 PF02976 DNA mismatch repair enzyme MutH HI0404 PF11734 TilS substrate C-terminal domain HI0404 PF09179 TilS substrate binding domain HI0404 PF01171 PP-loop family HI0405 PF08543 Phosphomethylpyrimidine kinase HI0406 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HI0407 PF00950 ABC 3 transport family HI0408 PF00005 ABC transporter HI0409 PF04225 Opacity-associated protein A LysM-like domain HI0409 PF01551 Peptidase family M23 HI0410 PF18024 Helix-turn-helix domain HI0410 PF00158 Sigma-54 interaction domain HI0411 PF17209 Hfq protein HI0412 PF00849 RNA pseudouridylate synthase HI0412 PF01479 S4 domain HI0413 PF12111 Polyribonucleotide phosphorylase C terminal HI0413 PF00575 S1 RNA binding domain HI0413 PF10150 Ribonuclease E/G family HI0414 PF02462 Opacity family porin protein HI0415 PF02110 Hydroxyethylthiazole kinase family HI0416 PF08543 Phosphomethylpyrimidine kinase HI0417 PF02581 Thiamine monophosphate synthase HI0418 PF00083 Sugar (and other) transporter HI0419 PF16325 Peptidase family U32 C-terminal domain HI0419 PF01136 Peptidase family U32 HI0420 PF08681 Protein of unknown function (DUF1778) HI0422 PF00271 Helicase conserved C-terminal domain HI0422 PF00270 DEAD/DEAH box helicase HI0423 PF05175 Methyltransferase small domain HI0424 PF08032 RNA 2'-O ribose methyltransferase substrate binding HI0424 PF00588 SpoU rRNA Methylase family HI0425 PF13091 PLD-like domain HI0426 PF07840 FadR C-terminal domain HI0426 PF00392 Bacterial regulatory proteins, gntR family HI0427 PF06450 Bacterial Na+/H+ antiporter B (NhaB) HI0428 PF02600 Disulfide bond formation protein DsbB HI0429 PF01380 SIS domain HI0430 PF00216 Bacterial DNA-binding protein HI0431 PF04222 Protein of unknown function (DUF416) HI0432 PF00293 NUDIX domain HI0432 PF09297 NADH pyrophosphatase zinc ribbon domain HI0433 PF01521 Iron-sulphur cluster biosynthesis HI0433 PF01106 NifU-like domain HI0434 PF00156 Phosphoribosyl transferase domain HI0435 PF03958 Bacterial type II/III secretion system short domain HI0435 PF00263 Bacterial type II and III secretion system protein HI0436 PF04351 Pilus assembly protein, PilP HI0439 PF11104 Type IV pilus assembly protein PilM; HI0440 PF00905 Penicillin binding protein transpeptidase domain HI0440 PF00912 Transglycosylase HI0440 PF17092 Penicillin-binding protein OB-like domain HI0441 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ HI0442 PF02575 YbaB/EbfC DNA-binding family HI0443 PF13662 Toprim domain HI0443 PF02132 RecR protein HI0444 PF01131 DNA topoisomerase HI0444 PF01751 Toprim domain HI0445 PF03840 Preprotein translocase SecG subunit HI0446 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HI0447 PF00294 pfkB family carbohydrate kinase HI0448 PF00381 PTS HPr component phosphorylation site HI0448 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HI0450 PF09827 CRISPR associated protein Cas2 HI0451 PF17375 Family of unknown function (DUF5397) HI0452 PF01595 Cyclin M transmembrane N-terminal domain HI0452 PF03471 Transporter associated domain HI0452 PF00571 CBS domain HI0453 PF07509 Protein of unknown function (DUF1523) HI0454 PF01026 TatD related DNase HI0455 PF09115 DNA polymerase III, delta subunit, C terminal HI0456 PF02223 Thymidylate kinase HI0457 PF02618 YceG-like family HI0458 PF09312 SurA N-terminal domain HI0458 PF00639 PPIC-type PPIASE domain HI0459 PF00156 Phosphoribosyl transferase domain HI0460 PF03819 MazG nucleotide pyrophosphohydrolase domain HI0461 PF04393 Protein of unknown function (DUF535) HI0462 PF02190 ATP-dependent protease La (LON) substrate-binding domain HI0462 PF05362 Lon protease (S16) C-terminal proteolytic domain HI0462 PF00004 ATPase family associated with various cellular activities (AAA) HI0463 PF06969 HemN C-terminal domain HI0463 PF04055 Radical SAM superfamily HI0464 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HI0465 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HI0465 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HI0466 PF01571 Aminomethyltransferase folate-binding domain HI0467 PF08340 Domain of unknown function (DUF1732) HI0467 PF03755 YicC-like family, N-terminal region HI0468 PF08029 HisG, C-terminal domain HI0468 PF01634 ATP phosphoribosyltransferase HI0469 PF00815 Histidinol dehydrogenase HI0470 PF00155 Aminotransferase class I and II HI0471 PF00475 Imidazoleglycerol-phosphate dehydratase HI0472 PF00117 Glutamine amidotransferase class-I HI0473 PF00977 Histidine biosynthesis protein HI0474 PF00977 Histidine biosynthesis protein HI0475 PF01502 Phosphoribosyl-AMP cyclohydrolase HI0475 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HI0477 PF03222 Tryptophan/tyrosine permease family HI0478 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HI0479 PF02874 ATP synthase alpha/beta family, beta-barrel domain HI0479 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HI0480 PF00231 ATP synthase HI0481 PF00306 ATP synthase alpha/beta chain, C terminal domain HI0481 PF02874 ATP synthase alpha/beta family, beta-barrel domain HI0481 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HI0482 PF00213 ATP synthase delta (OSCP) subunit HI0483 PF00430 ATP synthase B/B' CF(0) HI0484 PF00137 ATP synthase subunit C HI0485 PF00119 ATP synthase A chain HI0485.1 PF03899 ATP synthase I chain HI0486 PF02527 rRNA small subunit methyltransferase G HI0487 PF00874 PRD domain HI0488 PF13419 Haloacid dehalogenase-like hydrolase HI0491 PF02664 S-Ribosylhomocysteinase (LuxS) HI0493 PF13333 Integrase core domain HI0496 PF00227 Proteasome subunit HI0497 PF00004 ATPase family associated with various cellular activities (AAA) HI0497 PF10431 C-terminal, D2-small domain, of ClpB protein HI0497 PF07724 AAA domain (Cdc48 subfamily) HI0498 PF13416 Bacterial extracellular solute-binding protein HI0499 PF01266 FAD dependent oxidoreductase HI0500 PF02646 RmuC family HI0501 PF05025 RbsD / FucU transport protein family HI0502 PF00005 ABC transporter HI0503 PF02653 Branched-chain amino acid transport system / permease component HI0504 PF13407 Periplasmic binding protein domain HI0505 PF00294 pfkB family carbohydrate kinase HI0506 PF00356 Bacterial regulatory proteins, lacI family HI0507 PF03350 Uncharacterized protein family, UPF0114 HI0508 PF03737 Aldolase/RraA HI0509 PF01040 UbiA prenyltransferase family HI0510 PF01980 tRNA-methyltransferase O HI0510 PF18389 TrmO C-terminal domain HI0511 PF03595 Voltage-dependent anion channel HI0512 PF09226 Restriction endonuclease HincII HI0513 PF07669 Eco57I restriction-modification methylase HI0513 PF02384 N-6 DNA Methylase HI0514 PF04983 RNA polymerase Rpb1, domain 3 HI0514 PF04997 RNA polymerase Rpb1, domain 1 HI0514 PF00623 RNA polymerase Rpb1, domain 2 HI0514 PF05000 RNA polymerase Rpb1, domain 4 HI0514 PF04998 RNA polymerase Rpb1, domain 5 HI0515 PF10385 RNA polymerase beta subunit external 1 domain HI0515 PF04565 RNA polymerase Rpb2, domain 3 HI0515 PF04561 RNA polymerase Rpb2, domain 2 HI0515 PF04563 RNA polymerase beta subunit HI0515 PF04560 RNA polymerase Rpb2, domain 7 HI0515 PF00562 RNA polymerase Rpb2, domain 6 HI0516 PF00687 Ribosomal protein L1p/L10e family HI0517 PF03946 Ribosomal protein L11, N-terminal domain HI0517 PF00298 Ribosomal protein L11, RNA binding domain HI0518 PF01048 Phosphorylase superfamily HI0519 PF01773 Na+ dependent nucleoside transporter N-terminus HI0519 PF07662 Na+ dependent nucleoside transporter C-terminus HI0519 PF07670 Nucleoside recognition HI0520 PF04055 Radical SAM superfamily HI0521 PF11230 Protein of unknown function (DUF3029) HI0523 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HI0524 PF01116 Fructose-bisphosphate aldolase class-II HI0525 PF00162 Phosphoglycerate kinase HI0526 PF00445 Ribonuclease T2 family HI0527 PF00037 4Fe-4S binding domain HI0528 PF03222 Tryptophan/tyrosine permease family HI0529 PF00265 Thymidine kinase HI0530 PF00814 Glycoprotease family HI0531 PF01165 Ribosomal protein S21 HI0532 PF08275 DNA primase catalytic core, N-terminal domain HI0532 PF08278 DNA primase DnaG DnaB-binding HI0532 PF01807 CHC2 zinc finger HI0532 PF10410 DnaB-helicase binding domain of primase HI0533 PF04545 Sigma-70, region 4 HI0533 PF04539 Sigma-70 region 3 HI0533 PF00140 Sigma-70 factor, region 1.2 HI0533 PF04542 Sigma-70 region 2 HI0533 PF03979 Sigma-70 factor, region 1.1 HI0533 PF04546 Sigma-70, non-essential region HI0534 PF10415 Fumarase C C-terminus HI0534 PF00206 Lyase HI0535 PF01774 UreD urease accessory protein HI0536 PF02492 CobW/HypB/UreG, nucleotide-binding domain HI0537 PF01730 UreF HI0538 PF05194 UreE urease accessory protein, C-terminal domain HI0538 PF02814 UreE urease accessory protein, N-terminal domain HI0539 PF00449 Urease alpha-subunit, N-terminal domain HI0539 PF01979 Amidohydrolase family HI0540 PF00699 Urease beta subunit HI0541 PF00547 Urease, gamma subunit HI0542 PF00166 Chaperonin 10 Kd subunit HI0543 PF00118 TCP-1/cpn60 chaperonin family HI0544 PF03948 Ribosomal protein L9, C-terminal domain HI0544 PF01281 Ribosomal protein L9, N-terminal domain HI0545 PF01084 Ribosomal protein S18 HI0546 PF00436 Single-strand binding protein family HI0547 PF01250 Ribosomal protein S6 HI0548 PF01176 Translation initiation factor 1A / IF-1 HI0549 PF00398 Ribosomal RNA adenine dimethylase HI0550 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) HI0551 PF00149 Calcineurin-like phosphoesterase HI0552 PF10786 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) HI0553 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HI0553 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HI0558 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain HI0558 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain HI0559 PF00459 Inositol monophosphatase family HI0561 PF03169 OPT oligopeptide transporter protein HI0562 PF01479 S4 domain HI0563 PF01037 Lrp/AsnC ligand binding domain HI0563 PF13404 AsnC-type helix-turn-helix domain HI0564 PF03590 Aspartate-ammonia ligase HI0565 PF13419 Haloacid dehalogenase-like hydrolase HI0566 PF00834 Ribulose-phosphate 3 epimerase family HI0567 PF00986 DNA gyrase B subunit, carboxyl terminus HI0567 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HI0567 PF01751 Toprim domain HI0567 PF00204 DNA gyrase B HI0567 PF18053 DNA gyrase B subunit insert domain HI0568 PF09371 Tex-like protein N-terminal domain HI0568 PF17674 HHH domain HI0568 PF00575 S1 RNA binding domain HI0568 PF16921 Tex protein YqgF-like domain HI0569 PF01272 Transcription elongation factor, GreA/GreB, C-term HI0569 PF03449 Transcription elongation factor, N-terminal HI0570 PF00440 Bacterial regulatory proteins, tetR family HI0571 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HI0571 PF03466 LysR substrate binding domain HI0572 PF00462 Glutaredoxin HI0572 PF08534 Redoxin HI0573 PF04102 SlyX HI0574 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HI0574 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HI0575 PF13309 HTH domain HI0575 PF08348 YheO-like PAS domain HI0576 PF02635 DsrE/DsrF-like family HI0576.1 PF02635 DsrE/DsrF-like family HI0577 PF04077 DsrH like protein HI0578 PF03144 Elongation factor Tu domain 2 HI0578 PF00009 Elongation factor Tu GTP binding domain HI0578 PF03143 Elongation factor Tu C-terminal domain HI0579 PF00009 Elongation factor Tu GTP binding domain HI0579 PF03764 Elongation factor G, domain IV HI0579 PF14492 Elongation Factor G, domain II HI0579 PF03144 Elongation factor Tu domain 2 HI0579 PF00679 Elongation factor G C-terminus HI0580 PF00177 Ribosomal protein S7p/S5e HI0581 PF00164 Ribosomal protein S12/S23 HI0582 PF13932 GidA associated domain HI0582 PF01134 Glucose inhibited division protein A HI0583 PF00149 Calcineurin-like phosphoesterase HI0583 PF02872 5'-nucleotidase, C-terminal domain HI0584 PF01546 Peptidase family M20/M25/M40 HI0584 PF07687 Peptidase dimerisation domain HI0587 PF03575 Peptidase family S51 HI0588 PF07687 Peptidase dimerisation domain HI0588 PF01546 Peptidase family M20/M25/M40 HI0590 PF13520 Amino acid permease HI0591 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HI0591 PF01276 Orn/Lys/Arg decarboxylase, major domain HI0591 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HI0594 PF03606 C4-dicarboxylate anaerobic carrier HI0595 PF00696 Amino acid kinase family HI0596 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HI0596 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HI0597.1 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HI0599 PF02631 RecX family HI0600 PF00154 recA bacterial DNA recombination protein HI0601 PF04994 TfoX C-terminal domain HI0601 PF04993 TfoX N-terminal domain HI0602 PF07219 HemY protein N-terminus HI0604 PF01295 Adenylate cyclase, class-I HI0604 PF12633 Adenylate cyclase NT domain HI0605 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HI0605 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HI0606 PF06426 Serine acetyltransferase, N-terminal HI0606 PF00132 Bacterial transferase hexapeptide (six repeats) HI0607 PF08501 Shikimate dehydrogenase substrate binding domain HI0608 PF00939 Sodium:sulfate symporter transmembrane region HI0609 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HI0609 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HI0610 PF07690 Major Facilitator Superfamily HI0611 PF00596 Class II Aldolase and Adducin N-terminal domain HI0612 PF05025 RbsD / FucU transport protein family HI0613 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HI0613 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HI0614 PF07881 L-fucose isomerase, first N-terminal domain HI0614 PF07882 L-fucose isomerase, second N-terminal domain HI0614 PF02952 L-fucose isomerase, C-terminal domain HI0615 PF08220 DeoR-like helix-turn-helix domain HI0615 PF00455 DeoR C terminal sensor domain HI0616 PF18339 RapA N-terminal Tudor like domain 1 HI0616 PF12137 RNA polymerase recycling family C-terminal HI0616 PF18337 RapA N-terminal Tudor like domain HI0616 PF00271 Helicase conserved C-terminal domain HI0616 PF04851 Type III restriction enzyme, res subunit HI0617 PF00849 RNA pseudouridylate synthase HI0618 PF01694 Rhomboid family HI0619 PF08220 DeoR-like helix-turn-helix domain HI0619 PF00455 DeoR C terminal sensor domain HI0620 PF03180 NLPA lipoprotein HI0621 PF00005 ABC transporter HI0621 PF09383 NIL domain HI0622 PF01327 Polypeptide deformylase HI0623 PF02911 Formyl transferase, C-terminal domain HI0623 PF00551 Formyl transferase HI0624 PF01189 16S rRNA methyltransferase RsmB/F HI0624 PF01029 NusB family HI0625 PF02254 TrkA-N domain HI0625 PF02080 TrkA-C domain HI0626 PF01741 Large-conductance mechanosensitive channel, MscL HI0627 PF03937 Flavinator of succinate dehydrogenase HI0628 PF04542 Sigma-70 region 2 HI0628 PF08281 Sigma-70, region 4 HI0629 PF03872 Anti sigma-E protein RseA, N-terminal domain HI0629 PF03873 Anti sigma-E protein RseA, C-terminal domain HI0630 PF17188 MucB/RseB C-terminal domain HI0630 PF03888 MucB/RseB N-terminal domain HI0631 PF00485 Phosphoribulokinase / Uridine kinase family HI0632 PF03143 Elongation factor Tu C-terminal domain HI0632 PF03144 Elongation factor Tu domain 2 HI0632 PF00009 Elongation factor Tu GTP binding domain HI0633 PF00654 Voltage gated chloride channel HI0634 PF01207 Dihydrouridine synthase (Dus) HI0635 PF00593 TonB dependent receptor HI0635 PF04886 PT repeat HI0635 PF07715 TonB-dependent Receptor Plug Domain HI0636 PF04175 Protein of unknown function (DUF406) HI0637 PF00579 tRNA synthetases class I (W and Y) HI0638 PF04356 Protein of unknown function (DUF489) HI0639 PF00206 Lyase HI0639 PF08328 Adenylosuccinate lyase C-terminal HI0640 PF00466 Ribosomal protein L10 HI0641 PF00542 Ribosomal protein L7/L12 C-terminal domain HI0641 PF16320 Ribosomal protein L7/L12 dimerisation domain HI0642 PF00132 Bacterial transferase hexapeptide (six repeats) HI0642 PF12804 MobA-like NTP transferase domain HI0642a PF17364 Family of unknown function (DUF5389) HI0643 PF00384 Molybdopterin oxidoreductase HI0643 PF18364 Molybdopterin oxidoreductase N-terminal domain HI0643 PF01568 Molydopterin dinucleotide binding domain HI0644 PF03264 NapC/NirT cytochrome c family, N-terminal region HI0645 PF12146 Serine aminopeptidase, S33 HI0646 PF02774 Semialdehyde dehydrogenase, dimerisation domain HI0646 PF01118 Semialdehyde dehydrogenase, NAD binding domain HI0647 PF02308 MgtC family HI0648 PF02525 Flavodoxin-like fold HI0649 PF13361 UvrD-like helicase C-terminal domain HI0649 PF00580 UvrD/REP helicase N-terminal domain HI0650 PF07119 Protein of unknown function (DUF1375) HI0651 PF01467 Cytidylyltransferase-like HI0652 PF00534 Glycosyl transferases group 1 HI0652 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HI0653 PF00535 Glycosyl transferase family 2 HI0654 PF03352 Methyladenine glycosylase HI0655 PF01488 Shikimate / quinate 5-dehydrogenase HI0655 PF08501 Shikimate dehydrogenase substrate binding domain HI0655 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HI0656 PF01300 Telomere recombination HI0656.1 PF01396 Topoisomerase DNA binding C4 zinc finger HI0658 PF00005 ABC transporter HI0658 PF12848 ABC transporter HI0659 PF01381 Helix-turn-helix HI0660 PF05973 Phage derived protein Gp49-like (DUF891) HI0661 PF04886 PT repeat HI0661 PF07715 TonB-dependent Receptor Plug Domain HI0661 PF00593 TonB dependent receptor HI0663m PF00005 ABC transporter HI0663m PF00664 ABC transporter transmembrane region HI0664 PF00664 ABC transporter transmembrane region HI0664 PF00005 ABC transporter HI0665 PF07804 HipA-like C-terminal domain HI0666 PF13657 HipA N-terminal domain HI0666.1 PF01381 Helix-turn-helix HI0667 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded HI0668 PF06005 Cell division protein ZapB HI0669 PF00258 Flavodoxin HI0670 PF02580 D-Tyr-tRNA(Tyr) deacylase HI0671 PF02542 YgbB family HI0672 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HI0673 PF04977 Septum formation initiator HI0674 PF00156 Phosphoribosyl transferase domain HI0675 PF07687 Peptidase dimerisation domain HI0675 PF01546 Peptidase family M20/M25/M40 HI0676 PF00589 Phage integrase family HI0676 PF02899 Phage integrase, N-terminal SAM-like domain HI0678 PF00121 Triosephosphate isomerase HI0679 PF00581 Rhodanese-like domain HI0680 PF00892 EamA-like transporter family HI0681 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HI0681 PF03466 LysR substrate binding domain HI0682 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HI0682 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HI0683 PF02754 Cysteine-rich domain HI0683 PF13183 4Fe-4S dicluster domain HI0684 PF00890 FAD binding domain HI0685 PF01266 FAD dependent oxidoreductase HI0685 PF04324 BFD-like [2Fe-2S] binding domain HI0686 PF07690 Major Facilitator Superfamily HI0687 PF00892 EamA-like transporter family HI0689 PF03009 Glycerophosphoryl diester phosphodiesterase family HI0690 PF00230 Major intrinsic protein HI0691 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HI0691 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HI0692 PF00156 Phosphoribosyl transferase domain HI0693 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) HI0694 PF00849 RNA pseudouridylate synthase HI0695 PF02541 Ppx/GppA phosphatase family HI0696 PF04357 TamB, inner membrane protein subunit of TAM complex HI0698 PF17243 POTRA domain TamA domain 1 HI0698 PF01103 Surface antigen HI0699 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HI0700 PF06877 Regulator of ribonuclease activity B HI0701 PF01142 tRNA pseudouridine synthase D (TruD) HI0702 PF01975 Survival protein SurE HI0703 PF09335 SNARE associated Golgi protein HI0706 PF01551 Peptidase family M23 HI0706 PF01476 LysM domain HI0707 PF00488 MutS domain V HI0707 PF05190 MutS family domain IV HI0707 PF05192 MutS domain III HI0707 PF05188 MutS domain II HI0707 PF01624 MutS domain I HI0708 PF12390 Selenocysteine synthase N terminal HI0708 PF03841 L-seryl-tRNA selenium transferase HI0709 PF00009 Elongation factor Tu GTP binding domain HI0709 PF03144 Elongation factor Tu domain 2 HI0709 PF09106 Elongation factor SelB, winged helix HI0709 PF09107 Elongation factor SelB, winged helix HI0710 PF04221 RelB antitoxin HI0711 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ HI0712 PF07715 TonB-dependent Receptor Plug Domain HI0712 PF04886 PT repeat HI0712 PF00593 TonB dependent receptor HI0713 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HI0713 PF05698 Bacterial trigger factor protein (TF) C-terminus HI0713 PF05697 Bacterial trigger factor protein (TF) HI0714 PF00574 Clp protease HI0715 PF10431 C-terminal, D2-small domain, of ClpB protein HI0715 PF06689 ClpX C4-type zinc finger HI0715 PF07724 AAA domain (Cdc48 subfamily) HI0716 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HI0717 PF02357 Transcription termination factor nusG HI0717 PF00467 KOW motif HI0718 PF04333 MlaA lipoprotein HI0719 PF01042 Endoribonuclease L-PSP HI0720 PF01435 Peptidase family M48 HI0721 PF01206 Sulfurtransferase TusA HI0722 PF01205 Uncharacterized protein family UPF0029 HI0722 PF09186 Domain of unknown function (DUF1949) HI0723 PF02386 Cation transport protein HI0724 PF04220 Der GTPase activator (YihI) HI0725 PF10675 Protein of unknown function (DUF2489) HI0726 PF00072 Response regulator receiver domain HI0726 PF00196 Bacterial regulatory proteins, luxR family HI0727 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HI0727 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HI0727.1 PF01491 Frataxin-like domain HI0728 PF16124 RecQ zinc-binding HI0728 PF00570 HRDC domain HI0728 PF00271 Helicase conserved C-terminal domain HI0728 PF09382 RQC domain HI0728 PF00270 DEAD/DEAH box helicase HI0729 PF04073 Aminoacyl-tRNA editing domain HI0729 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HI0729 PF03129 Anticodon binding domain HI0730 PF03968 OstA-like protein HI0730 PF04453 LPS transport system D HI0734 PF01553 Acyltransferase HI0735 PF00149 Calcineurin-like phosphoesterase HI0736 PF00209 Sodium:neurotransmitter symporter family HI0737 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HI0738 PF00920 Dehydratase family HI0738.1 PF00585 C-terminal regulatory domain of Threonine dehydratase HI0738.1 PF00291 Pyridoxal-phosphate dependent enzyme HI0739 PF01336 OB-fold nucleic acid binding domain HI0739 PF02811 PHP domain HI0739 PF07733 Bacterial DNA polymerase III alpha NTPase domain HI0739 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HI0739 PF14579 Helix-hairpin-helix motif HI0740 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HI0740 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HI0740 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HI0740 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HI0743 PF02556 Preprotein translocase subunit SecB HI0744 PF00581 Rhodanese-like domain HI0745 PF17763 Glutaminase/Asparaginase C-terminal domain HI0745 PF00710 Asparaginase, N-terminal HI0746 PF03605 Anaerobic c4-dicarboxylate membrane transporter HI0747 PF07992 Pyridine nucleotide-disulphide oxidoreductase HI0748 PF01553 Acyltransferase HI0749 PF01726 LexA DNA binding domain HI0749 PF00717 Peptidase S24-like HI0750 PF01678 Diaminopimelate epimerase HI0751 PF08534 Redoxin HI0752 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HI0752 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal HI0752 PF02769 AIR synthase related protein, C-terminal domain HI0753 PF03702 Anhydro-N-acetylmuramic acid kinase HI0754 PF01380 SIS domain HI0755 PF04748 Divergent polysaccharide deacetylase HI0756 PF01551 Peptidase family M23 HI0757 PF00300 Histidine phosphatase superfamily (branch 1) HI0758 PF01197 Ribosomal protein L31 HI0759 PF00730 HhH-GPD superfamily base excision DNA repair protein HI0759 PF14815 NUDIX domain HI0760 PF04362 Bacterial Fe(2+) trafficking HI0761 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain HI0761 PF01464 Transglycosylase SLT domain HI0762 PF00149 Calcineurin-like phosphoesterase HI0763 PF13521 AAA domain HI0763 PF01467 Cytidylyltransferase-like HI0764 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HI0765 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) HI0766 PF00588 SpoU rRNA Methylase family HI0768 PF00448 SRP54-type protein, GTPase domain HI0768 PF02881 SRP54-type protein, helical bundle domain HI0769 PF00005 ABC transporter HI0770 PF18075 FtsX extracellular domain HI0771 PF02803 Thiolase, C-terminal domain HI0771 PF00108 Thiolase, N-terminal domain HI0772 PF02667 Short chain fatty acid transporter HI0773 PF01144 Coenzyme A transferase HI0774 PF01144 Coenzyme A transferase HI0775 PF03466 LysR substrate binding domain HI0775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HI0776 PF00338 Ribosomal protein S10p/S20e HI0777 PF00297 Ribosomal protein L3 HI0778 PF00573 Ribosomal protein L4/L1 family HI0779 PF00276 Ribosomal protein L23 HI0780 PF03947 Ribosomal Proteins L2, C-terminal domain HI0780 PF00181 Ribosomal Proteins L2, RNA binding domain HI0781 PF00203 Ribosomal protein S19 HI0782 PF00237 Ribosomal protein L22p/L17e HI0783 PF07650 KH domain HI0783 PF00189 Ribosomal protein S3, C-terminal domain HI0784 PF00252 Ribosomal protein L16p/L10e HI0785 PF00831 Ribosomal L29 protein HI0786 PF00366 Ribosomal protein S17 HI0788 PF00238 Ribosomal protein L14p/L23e HI0789 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HI0789 PF00467 KOW motif HI0790 PF00673 ribosomal L5P family C-terminus HI0790 PF00281 Ribosomal protein L5 HI0791 PF00253 Ribosomal protein S14p/S29e HI0792 PF00410 Ribosomal protein S8 HI0793 PF00347 Ribosomal protein L6 HI0794 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HI0795 PF00333 Ribosomal protein S5, N-terminal domain HI0795 PF03719 Ribosomal protein S5, C-terminal domain HI0796 PF00327 Ribosomal protein L30p/L7e HI0797 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HI0798 PF00344 SecY translocase HI0798.1 PF00444 Ribosomal protein L36 HI0799 PF00416 Ribosomal protein S13/S18 HI0800 PF00411 Ribosomal protein S11 HI0801 PF01479 S4 domain HI0801 PF00163 Ribosomal protein S4/S9 N-terminal domain HI0802 PF01000 RNA polymerase Rpb3/RpoA insert domain HI0802 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HI0802 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HI0803 PF01196 Ribosomal protein L17 HI0806 PF01925 Sulfite exporter TauE/SafE HI0807 PF13288 DXP reductoisomerase C-terminal domain HI0807 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HI0807 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HI0808 PF01765 Ribosome recycling factor HI0809 PF01293 Phosphoenolpyruvate carboxykinase HI0810 PF01430 Hsp33 protein HI0811 PF14698 Argininosuccinate lyase C-terminal HI0811 PF00206 Lyase HI0812 PF00483 Nucleotidyl transferase HI0813 PF02599 Global regulator protein family HI0814 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HI0814 PF01411 tRNA synthetases class II (A) HI0814 PF02272 DHHA1 domain HI0815 PF00582 Universal stress protein family HI0816 PF00557 Metallopeptidase family M24 HI0816 PF05195 Aminopeptidase P, N-terminal domain HI0817 PF03695 Uncharacterised protein family (UPF0149) HI0818 PF01263 Aldose 1-epimerase HI0819 PF10509 Galactokinase galactose-binding signature HI0819 PF08544 GHMP kinases C terminal HI0819 PF00288 GHMP kinases N terminal domain HI0820 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain HI0820 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain HI0821 PF00356 Bacterial regulatory proteins, lacI family HI0822 PF13407 Periplasmic binding protein domain HI0823 PF00005 ABC transporter HI0824 PF02653 Branched-chain amino acid transport system / permease component HI0826 PF04279 Intracellular septation protein A HI0827 PF03061 Thioesterase superfamily HI0828 PF03795 YCII-related domain HI0829 PF01464 Transglycosylase SLT domain HI0829 PF14718 Soluble lytic murein transglycosylase L domain HI0830 PF01371 Trp repressor protein HI0831 PF00912 Transglycosylase HI0832 PF02313 Fumarate reductase subunit D HI0833 PF02300 Fumarate reductase subunit C HI0834 PF13183 4Fe-4S dicluster domain HI0834 PF13085 2Fe-2S iron-sulfur cluster binding domain HI0835 PF02910 Fumarate reductase flavoprotein C-term HI0835 PF00890 FAD binding domain HI0836 PF00152 tRNA synthetases class II (D, K and N) HI0837 PF00072 Response regulator receiver domain HI0837 PF00486 Transcriptional regulatory protein, C terminal HI0838 PF04355 SmpA / OmlA family HI0839 PF04245 37-kD nucleoid-associated bacterial protein HI0840 PF07208 Protein of unknown function (DUF1414) HI0841 PF00884 Sulfatase HI0841 PF11893 Domain of unknown function (DUF3413) HI0844 PF12804 MobA-like NTP transferase domain HI0845 PF06288 Protein of unknown function (DUF1040) HI0846 PF01323 DSBA-like thioredoxin domain HI0847 PF04219 Protein of unknown function, DUF HI0848 PF05958 tRNA (Uracil-5-)-methyltransferase HI0849m PF04445 Putative SAM-dependent methyltransferase HI0851 PF03205 Molybdopterin guanine dinucleotide synthesis protein B HI0852 PF07690 Major Facilitator Superfamily HI0853 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HI0854 PF01243 Pyridoxamine 5'-phosphate oxidase HI0854 PF10615 Protein of unknown function (DUF2470) HI0856 PF01367 5'-3' exonuclease, C-terminal SAM fold HI0856 PF00476 DNA polymerase family A HI0856 PF01612 3'-5' exonuclease HI0856 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HI0857 PF05164 Cell division protein ZapA HI0858 PF01812 5-formyltetrahydrofolate cyclo-ligase family HI0859 PF00004 ATPase family associated with various cellular activities (AAA) HI0859 PF07724 AAA domain (Cdc48 subfamily) HI0859 PF17871 AAA lid domain HI0859 PF02861 Clp amino terminal domain, pathogenicity island component HI0859 PF10431 C-terminal, D2-small domain, of ClpB protein HI0860 PF08032 RNA 2'-O ribose methyltransferase substrate binding HI0860 PF00588 SpoU rRNA Methylase family HI0861 PF08461 Ribonuclease R winged-helix domain HI0861 PF17876 Cold shock domain HI0861 PF00773 RNB domain HI0861 PF00575 S1 RNA binding domain HI0861 PF08206 Ribonuclease B OB domain HI0862 PF02592 Putative vitamin uptake transporter HI0863 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HI0863 PF01243 Pyridoxamine 5'-phosphate oxidase HI0864 PF00679 Elongation factor G C-terminus HI0864 PF00009 Elongation factor Tu GTP binding domain HI0864 PF03144 Elongation factor Tu domain 2 HI0865 PF00120 Glutamine synthetase, catalytic domain HI0865 PF03951 Glutamine synthetase, beta-Grasp domain HI0867 PF01943 Polysaccharide biosynthesis protein HI0868 PF00535 Glycosyl transferase family 2 HI0871 PF07922 Glycosyltransferase family 52 HI0872 PF02397 Bacterial sugar transferase HI0873 PF16363 GDP-mannose 4,6 dehydratase HI0874 PF04932 O-Antigen ligase HI0876 PF00334 Nucleoside diphosphate kinase HI0877 PF01018 GTP1/OBG HI0877 PF01926 50S ribosome-binding GTPase HI0878 PF00892 EamA-like transporter family HI0879 PF01016 Ribosomal L27 protein HI0880 PF00829 Ribosomal prokaryotic L21 protein HI0881 PF00348 Polyprenyl synthetase HI0882 PF02677 Epoxyqueuosine reductase QueH HI0883 PF01235 Sodium:alanine symporter family HI0884 PF00072 Response regulator receiver domain HI0884 PF00486 Transcriptional regulatory protein, C terminal HI0885 PF13098 Thioredoxin-like domain HI0885 PF02683 Cytochrome C biogenesis protein transmembrane region HI0885 PF11412 Disulphide bond corrector protein DsbC HI0886 PF07681 DoxX HI0887 PF02142 MGS-like domain HI0887 PF01808 AICARFT/IMPCHase bienzyme HI0888 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HI0888 PF02843 Phosphoribosylglycinamide synthetase, C domain HI0888 PF02844 Phosphoribosylglycinamide synthetase, N domain HI0889 PF00464 Serine hydroxymethyltransferase HI0890m PF01121 Dephospho-CoA kinase HI0891m PF03884 DNA gyrase inhibitor YacG HI0892 PF00270 DEAD/DEAH box helicase HI0892 PF00271 Helicase conserved C-terminal domain HI0893 PF00440 Bacterial regulatory proteins, tetR family HI0894 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HI0895 PF00873 AcrB/AcrD/AcrF family HI0896 PF05036 Sporulation related domain HI0897 PF07690 Major Facilitator Superfamily HI0898 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HI0898 PF00529 HlyD membrane-fusion protein of T1SS HI0899 PF00186 Dihydrofolate reductase HI0900 PF01472 PUA domain HI0900 PF00696 Amino acid kinase family HI0901 PF00293 NUDIX domain HI0902 PF01925 Sulfite exporter TauE/SafE HI0904 PF01790 Prolipoprotein diacylglyceryl transferase HI0905 PF00303 Thymidylate synthase HI0906 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HI0907 PF05258 Dna[CI] antecedent, DciA HI0908 PF10818 Protein of unknown function (DUF2547) HI0909 PF02810 SEC-C motif HI0909 PF07517 SecA DEAD-like domain HI0909 PF01043 SecA preprotein cross-linking domain HI0909 PF07516 SecA Wing and Scaffold domain HI0910 PF00293 NUDIX domain HI0911 PF02254 TrkA-N domain HI0911 PF00999 Sodium/hydrogen exchanger family HI0912 PF08241 Methyltransferase domain HI0913 PF00318 Ribosomal protein S2 HI0914 PF00889 Elongation factor TS HI0915 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HI0915 PF00132 Bacterial transferase hexapeptide (six repeats) HI0916 PF03938 Outer membrane protein (OmpH-like) HI0917 PF07244 Surface antigen variable number repeat HI0917 PF01103 Surface antigen HI0918 PF02163 Peptidase family M50 HI0920 PF01255 Putative undecaprenyl diphosphate synthase HI0921 PF08264 Anticodon-binding domain of tRNA HI0921 PF00133 tRNA synthetases class I (I, L, M and V) HI0921 PF13603 Leucyl-tRNA synthetase, Domain 2 HI0922 PF04390 Lipopolysaccharide-assembly HI0923 PF06144 DNA polymerase III, delta subunit HI0923 PF14840 Processivity clamp loader gamma complex DNA pol III C-term HI0924 PF05746 DALR anticodon binding domain HI0924 PF02092 Glycyl-tRNA synthetase beta subunit HI0925 PF04480 Protein of unknown function (DUF559) HI0927 PF02091 Glycyl-tRNA synthetase alpha subunit HI0928 PF06628 Catalase-related immune-responsive HI0928 PF00199 Catalase HI0929 PF03738 Glutathionylspermidine synthase preATP-grasp HI0931 PF10008 Uncharacterized protein conserved in bacteria (DUF2251) HI0932 PF00113 Enolase, C-terminal TIM barrel domain HI0932 PF03952 Enolase, N-terminal domain HI0934 PF03918 Cytochrome C biogenesis protein HI0935 PF08534 Redoxin HI0936 PF01578 Cytochrome C assembly protein HI0936 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal HI0937 PF00459 Inositol monophosphatase family HI0938 PF07963 Prokaryotic N-terminal methylation motif HI0940 PF10833 Protein of unknown function (DUF2572) HI0941 PF17344 Family of unknown function (DUF5374) HI0942 PF17946 RecC C-terminal domain HI0943 PF03477 ATP cone domain HI0944 PF01872 RibD C-terminal domain HI0944 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HI0945 PF13180 PDZ domain HI0946 PF06827 Zinc finger found in FPG and IleRS HI0946 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HI0946 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HI0946.1 PF00282 Pyridoxal-dependent decarboxylase conserved domain HI0947 PF01850 PIN domain HI0948 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HI0949 PF00202 Aminotransferase class-III HI0950 PF00471 Ribosomal protein L33 HI0951 PF00830 Ribosomal L28 family HI0952 PF04002 RadC-like JAB domain HI0953 PF04127 DNA / pantothenate metabolism flavoprotein HI0953 PF02441 Flavoprotein HI0954 PF00692 dUTPase HI0955 PF00440 Bacterial regulatory proteins, tetR family HI0957 PF13545 Crp-like helix-turn-helix domain HI0957 PF00027 Cyclic nucleotide-binding domain HI0958 PF05958 tRNA (Uracil-5-)-methyltransferase HI0959 PF00933 Glycosyl hydrolase family 3 N terminal domain HI0960 PF07233 Protein of unknown function (DUF1425) HI0961 PF01230 HIT domain HI0963 PF01687 Riboflavin kinase HI0963 PF06574 FAD synthetase HI0964 PF03023 Lipid II flippase MurJ HI0965 PF01649 Ribosomal protein S20 HI0966 PF17311 Family of unknown function (DUF5358) HI0968 PF00378 Enoyl-CoA hydratase/isomerase HI0969 PF13378 Enolase C-terminal domain-like HI0970 PF01220 Dehydroquinase class II HI0971 PF00364 Biotin-requiring enzyme HI0972 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HI0972 PF00289 Biotin carboxylase, N-terminal domain HI0972 PF02785 Biotin carboxylase C-terminal domain HI0973 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B HI0974.1 PF06196 Protein of unknown function (DUF997) HI0975 PF00474 Sodium:solute symporter family HI0977 PF02661 Fic/DOC family HI0979 PF01207 Dihydrouridine synthase (Dus) HI0980 PF02954 Bacterial regulatory protein, Fis family HI0981 PF01668 SmpB protein HI0982 PF00365 Phosphofructokinase HI0984 PF03883 Peroxide stress protein YaaA HI0985 PF17782 DprA winged helix domain HI0985 PF02481 DNA recombination-mediator protein A HI0986 PF00682 HMGL-like HI0986 PF08502 LeuA allosteric (dimerisation) domain HI0987 PF00180 Isocitrate/isopropylmalate dehydrogenase HI0988 PF00330 Aconitase family (aconitate hydratase) HI0989 PF00694 Aconitase C-terminal domain HI0990 PF03212 Pertactin HI0990 PF02395 Immunoglobulin A1 protease HI0990 PF03797 Autotransporter beta-domain HI0991 PF02463 RecF/RecN/SMC N terminal domain HI0992 PF00712 DNA polymerase III beta subunit, N-terminal domain HI0992 PF02767 DNA polymerase III beta subunit, central domain HI0992 PF02768 DNA polymerase III beta subunit, C-terminal domain HI0993 PF11638 DnaA N-terminal domain HI0993 PF08299 Bacterial dnaA protein helix-turn-helix HI0993 PF00308 Bacterial dnaA protein HI0994 PF07715 TonB-dependent Receptor Plug Domain HI0994 PF00593 TonB dependent receptor HI0995 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B HI0995 PF17484 N-Lobe handle Tf-binding protein B HI0995 PF17483 C-lobe handle domain of Tf-binding protein B HI0998 PF00468 Ribosomal protein L34 HI0999 PF00825 Ribonuclease P HI1000 PF01809 Putative membrane protein insertion efficiency factor HI1001 PF02096 60Kd inner membrane protein HI1001 PF14849 YidC periplasmic domain HI1002 PF12631 MnmE helical domain HI1002 PF10396 GTP-binding protein TrmE N-terminus HI1002 PF01926 50S ribosome-binding GTPase HI1005 PF00884 Sulfatase HI1006 PF01252 Signal peptidase (SPase) II HI1007 PF02401 LytB protein HI1009 PF00455 DeoR C terminal sensor domain HI1009 PF08220 DeoR-like helix-turn-helix domain HI1010 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HI1010 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HI1011 PF17042 Nucleotide-binding C-terminal domain HI1011 PF07005 Sugar-binding N-terminal domain HI1012 PF00596 Class II Aldolase and Adducin N-terminal domain HI1013 PF01261 Xylose isomerase-like TIM barrel HI1014 PF01370 NAD dependent epimerase/dehydratase family HI1015 PF02447 GntP family permease HI1016 PF04199 Putative cyclase HI1017 PF00230 Major intrinsic protein HI1020 PF00528 Binding-protein-dependent transport system inner membrane component HI1021 PF00005 ABC transporter HI1022 PF04055 Radical SAM superfamily HI1022 PF06968 Biotin and Thiamin Synthesis associated domain HI1023 PF02779 Transketolase, pyrimidine binding domain HI1023 PF02780 Transketolase, C-terminal domain HI1023 PF00456 Transketolase, thiamine diphosphate binding domain HI1024 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HI1025 PF00596 Class II Aldolase and Adducin N-terminal domain HI1026 PF01261 Xylose isomerase-like TIM barrel HI1027 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HI1027 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HI1028 PF03480 Bacterial extracellular solute-binding protein, family 7 HI1029 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HI1030 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HI1031 PF02615 Malate/L-lactate dehydrogenase HI1032 PF01614 Bacterial transcriptional regulator HI1032 PF09339 IclR helix-turn-helix domain HI1033 PF18429 Domain of unknown function (DUF5609) HI1034 PF04461 Protein of unknown function (DUF520) HI1035 PF01544 CorA-like Mg2+ transporter protein HI1036 PF02325 YGGT family HI1037 PF13230 Glutamine amidotransferases class-II HI1038 PF13635 Domain of unknown function (DUF4143) HI1038 PF13173 AAA domain HI1040 PF09519 HindVP restriction endonuclease HI1041 PF00145 C-5 cytosine-specific DNA methylase HI1043 PF12838 4Fe-4S dicluster domain HI1043 PF00037 4Fe-4S binding domain HI1044 PF02613 Nitrate reductase delta subunit HI1045 PF04976 DMSO reductase anchor subunit (DmsC) HI1046 PF12800 4Fe-4S binding domain HI1046 PF13247 4Fe-4S dicluster domain HI1047 PF01568 Molydopterin dinucleotide binding domain HI1047 PF00384 Molybdopterin oxidoreductase HI1047 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HI1048 PF01841 Transglutaminase-like superfamily HI1050 PF00403 Heavy-metal-associated domain HI1051 PF00664 ABC transporter transmembrane region HI1051 PF00005 ABC transporter HI1052 PF12833 Helix-turn-helix domain HI1052 PF02311 AraC-like ligand binding domain HI1053 PF02627 Carboxymuconolactone decarboxylase family HI1056 PF01555 DNA methylase HI1058 PF12564 Type III restriction/modification enzyme methylation subunit HI1059 PF01351 Ribonuclease HII HI1060 PF02684 Lipid-A-disaccharide synthetase HI1061 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HI1061 PF00132 Bacterial transferase hexapeptide (six repeats) HI1062 PF07977 FabA-like domain HI1065 PF00696 Amino acid kinase family HI1066 PF03916 Polysulphide reductase, NrfD HI1067 PF13247 4Fe-4S dicluster domain HI1069 PF02335 Cytochrome c552 HI1070 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HI1070 PF00270 DEAD/DEAH box helicase HI1070 PF11898 Domain of unknown function (DUF3418) HI1070 PF04408 Helicase associated domain (HA2) HI1070 PF00271 Helicase conserved C-terminal domain HI1073 PF04241 Protein of unknown function (DUF423) HI1074 PF04284 Protein of unknown function (DUF441) HI1075 PF02322 Cytochrome bd terminal oxidase subunit II HI1076 PF01654 Cytochrome bd terminal oxidase subunit I HI1077 PF00117 Glutamine amidotransferase class-I HI1077 PF06418 CTP synthase N-terminus HI1078 PF00005 ABC transporter HI1079m PF00528 Binding-protein-dependent transport system inner membrane component HI1080 PF00497 Bacterial extracellular solute-binding proteins, family 3 HI1081 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HI1082 PF01722 BolA-like protein HI1083 PF13466 STAS domain HI1084 PF05494 MlaC protein HI1085 PF02470 MlaD protein HI1086 PF02405 Permease MlaE HI1087 PF00005 ABC transporter HI1088 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HI1088 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HI1089 PF00005 ABC transporter HI1090 PF03379 CcmB protein HI1091 PF01578 Cytochrome C assembly protein HI1092 PF04995 Heme exporter protein D (CcmD) HI1093 PF03100 CcmE HI1094 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal HI1094 PF01578 Cytochrome C assembly protein HI1095 PF08534 Redoxin HI1096m PF03918 Cytochrome C biogenesis protein HI1097m PF03918 Cytochrome C biogenesis protein HI1100 PF01653 NAD-dependent DNA ligase adenylation domain HI1100 PF00533 BRCA1 C Terminus (BRCT) domain HI1100 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HI1100 PF12826 Helix-hairpin-helix motif HI1100 PF03120 NAD-dependent DNA ligase OB-fold domain HI1101 PF04354 ZipA, C-terminal FtsZ-binding domain HI1103 PF00291 Pyridoxal-phosphate dependent enzyme HI1104 PF07690 Major Facilitator Superfamily HI1105 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HI1106 PF12833 Helix-turn-helix domain HI1107 PF03553 Na+/H+ antiporter family HI1109 PF02653 Branched-chain amino acid transport system / permease component HI1110 PF00005 ABC transporter HI1111 PF13407 Periplasmic binding protein domain HI1113 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HI1113 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HI1114 PF01370 NAD dependent epimerase/dehydratase family HI1115 PF00578 AhpC/TSA family HI1116 PF01791 DeoC/LacD family aldolase HI1117 PF13335 Magnesium chelatase, subunit ChlI C-terminal HI1117 PF01078 Magnesium chelatase, subunit ChlI HI1118 PF01926 50S ribosome-binding GTPase HI1119 PF04393 Protein of unknown function (DUF535) HI1120 PF00005 ABC transporter HI1120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HI1121 PF00005 ABC transporter HI1121 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HI1122 PF12911 N-terminal TM domain of oligopeptide transport permease C HI1122 PF00528 Binding-protein-dependent transport system inner membrane component HI1123 PF00528 Binding-protein-dependent transport system inner membrane component HI1124 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HI1125 PF00923 Transaldolase/Fructose-6-phosphate aldolase HI1129 PF02381 MraZ protein, putative antitoxin-like HI1130 PF01795 MraW methylase family HI1131 PF04999 Cell division protein FtsL HI1132 PF03717 Penicillin-binding Protein dimerisation domain HI1132 PF00905 Penicillin binding protein transpeptidase domain HI1133 PF08245 Mur ligase middle domain HI1133 PF01225 Mur ligase family, catalytic domain HI1133 PF02875 Mur ligase family, glutamate ligase domain HI1134 PF02875 Mur ligase family, glutamate ligase domain HI1134 PF08245 Mur ligase middle domain HI1134 PF01225 Mur ligase family, catalytic domain HI1135 PF00953 Glycosyl transferase family 4 HI1135 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HI1136 PF02875 Mur ligase family, glutamate ligase domain HI1136 PF08245 Mur ligase middle domain HI1137 PF01098 Cell cycle protein HI1138 PF04101 Glycosyltransferase family 28 C-terminal domain HI1138 PF03033 Glycosyltransferase family 28 N-terminal domain HI1139 PF01225 Mur ligase family, catalytic domain HI1139 PF02875 Mur ligase family, glutamate ligase domain HI1139 PF08245 Mur ligase middle domain HI1140 PF07478 D-ala D-ala ligase C-terminus HI1140 PF01820 D-ala D-ala ligase N-terminus HI1141 PF08478 POTRA domain, FtsQ-type HI1141 PF03799 Cell division protein FtsQ HI1142 PF02491 SHS2 domain inserted in FTSA HI1143 PF00091 Tubulin/FtsZ family, GTPase domain HI1143 PF12327 FtsZ family, C-terminal domain HI1144 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HI1145 PF00800 Prephenate dehydratase HI1145 PF01817 Chorismate mutase type II HI1146 PF03668 P-loop ATPase protein family HI1147 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HI1148 PF00005 ABC transporter HI1148 PF12399 Branched-chain amino acid ATP-binding cassette transporter HI1149m PF03968 OstA-like protein HI1150 PF06835 Lipopolysaccharide-assembly, LptC-related HI1151 PF04751 Protein of unknown function (DUF615) HI1152 PF01523 Putative modulator of DNA gyrase HI1153 PF00156 Phosphoribosyl transferase domain HI1154 PF00375 Sodium:dicarboxylate symporter family HI1156 PF00005 ABC transporter HI1156 PF00664 ABC transporter transmembrane region HI1157 PF00005 ABC transporter HI1157 PF00664 ABC transporter transmembrane region HI1158 PF07992 Pyridine nucleotide-disulphide oxidoreductase HI1160 PF00762 Ferrochelatase HI1161 PF03061 Thioesterase superfamily HI1162 PF04480 Protein of unknown function (DUF559) HI1163 PF13183 4Fe-4S dicluster domain HI1163 PF01565 FAD binding domain HI1163 PF02913 FAD linked oxidases, C-terminal domain HI1164 PF00691 OmpA family HI1164 PF01389 OmpA-like transmembrane domain HI1165 PF00462 Glutaredoxin HI1166 PF00155 Aminotransferase class I and II HI1167 PF00266 Aminotransferase class-V HI1168 PF04363 Protein of unknown function (DUF496) HI1168a PF01063 Amino-transferase class IV HI1169 PF00425 chorismate binding enzyme HI1171 PF00117 Glutamine amidotransferase class-I HI1172 PF02772 S-adenosylmethionine synthetase, central domain HI1172 PF00438 S-adenosylmethionine synthetase, N-terminal domain HI1172 PF02773 S-adenosylmethionine synthetase, C-terminal domain HI1173 PF17283 SprT-like zinc ribbon domain HI1173 PF10263 SprT-like family HI1174 PF02462 Opacity family porin protein HI1177 PF00528 Binding-protein-dependent transport system inner membrane component HI1178 PF00528 Binding-protein-dependent transport system inner membrane component HI1179 PF00497 Bacterial extracellular solute-binding proteins, family 3 HI1180 PF00005 ABC transporter HI1181 PF13580 SIS domain HI1184 PF00005 ABC transporter HI1184 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HI1185 PF00005 ABC transporter HI1185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HI1186 PF12911 N-terminal TM domain of oligopeptide transport permease C HI1186 PF00528 Binding-protein-dependent transport system inner membrane component HI1187 PF00528 Binding-protein-dependent transport system inner membrane component HI1188 PF00580 UvrD/REP helicase N-terminal domain HI1188 PF13361 UvrD-like helicase C-terminal domain HI1189 PF04055 Radical SAM superfamily HI1190 PF01242 6-pyruvoyl tetrahydropterin synthase HI1193 PF01063 Amino-transferase class IV HI1194m PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HI1194m PF03466 LysR substrate binding domain HI1195m PF18125 RlmM ferredoxin-like domain HI1195m PF01728 FtsJ-like methyltransferase HI1196 PF08442 ATP-grasp domain HI1196 PF00549 CoA-ligase HI1197 PF00549 CoA-ligase HI1197 PF02629 CoA binding domain HI1198 PF01300 Telomere recombination HI1199 PF00849 RNA pseudouridylate synthase HI1199 PF01479 S4 domain HI1200 PF03466 LysR substrate binding domain HI1200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HI1201 PF05175 Methyltransferase small domain HI1202 PF01713 Smr domain HI1203 PF01515 Phosphate acetyl/butaryl transferase HI1203 PF07085 DRTGG domain HI1204 PF00871 Acetokinase family HI1205 PF04217 Protein of unknown function, DUF412 HI1206 PF02674 Colicin V production protein HI1207 PF00156 Phosphoribosyl transferase domain HI1208 PF08338 Domain of unknown function (DUF1731) HI1208 PF01370 NAD dependent epimerase/dehydratase family HI1209 PF02863 Arginine repressor, C-terminal domain HI1209 PF01316 Arginine repressor, DNA binding domain HI1210 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HI1210 PF00056 lactate/malate dehydrogenase, NAD binding domain HI1211 PF01336 OB-fold nucleic acid binding domain HI1211 PF00152 tRNA synthetases class II (D, K and N) HI1212 PF00472 RF-1 domain HI1212 PF03462 PCRF domain HI1213 PF13098 Thioredoxin-like domain HI1213 PF10411 Disulfide bond isomerase protein N-terminus HI1214 PF17768 RecJ OB domain HI1214 PF01368 DHH family HI1214 PF02272 DHHA1 domain HI1216 PF01048 Phosphorylase superfamily HI1217 PF00593 TonB dependent receptor HI1217 PF07715 TonB-dependent Receptor Plug Domain HI1218 PF02652 L-lactate permease HI1219 PF02224 Cytidylate kinase HI1220 PF00575 S1 RNA binding domain HI1221 PF00216 Bacterial DNA-binding protein HI1222 PF06305 Lipopolysaccharide assembly protein A domain HI1223 PF18073 Rubredoxin metal binding domain HI1224 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HI1225 PF01253 Translation initiation factor SUI1 HI1225.1 PF00308 Bacterial dnaA protein HI1227 PF00860 Permease family HI1229 PF12170 DNA polymerase III tau subunit V interacting with alpha HI1229 PF12169 DNA polymerase III subunits gamma and tau domain III HI1230 PF00156 Phosphoribosyl transferase domain HI1231 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HI1231 PF07992 Pyridine nucleotide-disulphide oxidoreductase HI1232 PF02817 e3 binding domain HI1232 PF00364 Biotin-requiring enzyme HI1232 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HI1233 PF00456 Transketolase, thiamine diphosphate binding domain HI1233 PF17831 Pyruvate dehydrogenase E1 component middle domain HI1234 PF02142 MGS-like domain HI1237 PF00012 Hsp70 protein HI1238 PF00226 DnaJ domain HI1238 PF01556 DnaJ C terminal domain HI1238 PF00684 DnaJ central domain HI1239 PF00171 Aldehyde dehydrogenase family HI1240 PF03458 UPF0126 domain HI1242 PF07690 Major Facilitator Superfamily HI1243 PF00849 RNA pseudouridylate synthase HI1243 PF01479 S4 domain HI1244 PF08942 Domain of unknown function (DUF1919) HI1245 PF01515 Phosphate acetyl/butaryl transferase HI1245 PF03949 Malic enzyme, NAD binding domain HI1245 PF00390 Malic enzyme, N-terminal domain HI1246 PF00884 Sulfatase HI1247 PF12344 Ultra-violet resistance protein B HI1247 PF17757 UvrB interaction domain HI1247 PF04851 Type III restriction enzyme, res subunit HI1247 PF00271 Helicase conserved C-terminal domain HI1247 PF02151 UvrB/uvrC motif HI1248 PF03824 High-affinity nickel-transport protein HI1249 PF06226 Protein of unknown function (DUF1007) HI1250 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB HI1251 PF01381 Helix-turn-helix HI1252 PF12848 ABC transporter HI1252 PF00005 ABC transporter HI1253 PF04247 Invasion gene expression up-regulator, SirB HI1258 PF00271 Helicase conserved C-terminal domain HI1258 PF17757 UvrB interaction domain HI1258 PF03461 TRCF domain HI1258 PF02559 CarD-like/TRCF domain HI1258 PF00270 DEAD/DEAH box helicase HI1259 PF00595 PDZ domain HI1260 PF17848 Acetyl-coA carboxylase zinc finger domain HI1260 PF01039 Carboxyl transferase domain HI1261 PF08245 Mur ligase middle domain HI1262 PF02698 DUF218 domain HI1263 PF00561 alpha/beta hydrolase fold HI1264 PF03989 DNA gyrase C-terminal domain, beta-propeller HI1264 PF00521 DNA gyrase/topoisomerase IV, subunit A HI1265 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding HI1265 PF18381 YcaO cyclodehydratase C-terminal domain HI1272 PF00005 ABC transporter HI1273 PF13649 Methyltransferase domain HI1274 PF16123 Hydroxyacylglutathione hydrolase C-terminus HI1274 PF12706 Beta-lactamase superfamily domain HI1275 PF03848 Tellurite resistance protein TehB HI1275 PF09313 Domain of unknown function (DUF1971) HI1276 PF01588 Putative tRNA binding domain HI1276 PF09334 tRNA synthetases class I (M) HI1277 PF10609 NUBPL iron-transfer P-loop NTPase HI1278 PF00881 Nitroreductase family HI1279 PF02348 Cytidylyltransferase HI1282 PF17384 RimP C-terminal SH3 domain HI1282 PF02576 RimP N-terminal domain HI1283 PF13184 NusA-like KH domain HI1283 PF00575 S1 RNA binding domain HI1283 PF08529 NusA N-terminal domain HI1284 PF08364 Bacterial translation initiation factor IF-2 associated region HI1284 PF04760 Translation initiation factor IF-2, N-terminal region HI1284 PF00009 Elongation factor Tu GTP binding domain HI1284 PF11987 Translation-initiation factor 2 HI1285 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HI1285 PF18766 SWI2/SNF2 ATPase HI1285 PF11867 Domain of unknown function (DUF3387) HI1286 PF01420 Type I restriction modification DNA specificity domain HI1287 PF02384 N-6 DNA Methylase HI1288 PF02033 Ribosome-binding factor A HI1289 PF01509 TruB family pseudouridylate synthase (N terminal domain) HI1289 PF16198 tRNA pseudouridylate synthase B C-terminal domain HI1289 PF09157 Pseudouridine synthase II TruB, C-terminal HI1290 PF02153 Prephenate dehydrogenase HI1290 PF01817 Chorismate mutase type II HI1291 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term HI1291 PF14489 QueF-like protein HI1292 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) HI1293 PF02657 Fe-S metabolism associated domain HI1295 PF00266 Aminotransferase class-V HI1296 PF00565 Staphylococcal nuclease homologue HI1297 PF03788 LrgA family HI1298 PF04172 LrgB-like family HI1300 PF00005 ABC transporter HI1300 PF12848 ABC transporter HI1300 PF16326 ABC transporter C-terminal domain HI1301 PF00484 Carbonic anhydrase HI1302 PF00152 tRNA synthetases class II (D, K and N) HI1302 PF01336 OB-fold nucleic acid binding domain HI1303 PF00885 6,7-dimethyl-8-ribityllumazine synthase HI1304 PF01029 NusB family HI1305 PF02769 AIR synthase related protein, C-terminal domain HI1305 PF00586 AIR synthase related protein, N-terminal domain HI1306 PF04608 Phosphatidylglycerophosphatase A HI1307 PF01810 LysE type translocator HI1308 PF01113 Dihydrodipicolinate reductase, N-terminus HI1308 PF05173 Dihydrodipicolinate reductase, C-terminus HI1309 PF00111 2Fe-2S iron-sulfur cluster binding domain HI1311 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HI1311 PF01409 tRNA synthetases class II core domain (F) HI1312 PF03483 B3/4 domain HI1312 PF03484 tRNA synthetase B5 domain HI1312 PF03147 Ferredoxin-fold anticodon binding domain HI1312 PF01588 Putative tRNA binding domain HI1312 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HI1313 PF00216 Bacterial DNA-binding protein HI1314 PF00877 NlpC/P60 family HI1316 PF16347 Domain of unknown function (DUF4976) HI1317 PF01263 Aldose 1-epimerase HI1318m PF05198 Translation initiation factor IF-3, N-terminal domain HI1318m PF00707 Translation initiation factor IF-3, C-terminal domain HI1319m PF01632 Ribosomal protein L35 HI1320 PF00453 Ribosomal protein L20 HI1321 PF13361 UvrD-like helicase C-terminal domain HI1321 PF12705 PD-(D/E)XK nuclease superfamily HI1321 PF00580 UvrD/REP helicase N-terminal domain HI1322 PF13538 UvrD-like helicase C-terminal domain HI1323 PF06303 MatP N-terminal domain HI1323 PF17414 MatP C-terminal ribbon-helix-helix domain HI1324 PF13654 AAA domain HI1324 PF05362 Lon protease (S16) C-terminal proteolytic domain HI1325 PF07977 FabA-like domain HI1328 PF00312 Ribosomal protein S15 HI1330 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family HI1331 PF03449 Transcription elongation factor, N-terminal HI1331 PF01272 Transcription elongation factor, GreA/GreB, C-term HI1333 PF01985 CRS1 / YhbY (CRM) domain HI1334 PF01728 FtsJ-like methyltransferase HI1335 PF00004 ATPase family associated with various cellular activities (AAA) HI1335 PF17862 AAA+ lid domain HI1335 PF01434 Peptidase family M41 HI1335 PF06480 FtsH Extracellular HI1336 PF00809 Pterin binding enzyme HI1337 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HI1337 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HI1337 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HI1337 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HI1338 PF00300 Histidine phosphatase superfamily (branch 1) HI1340 PF02321 Outer membrane efflux protein HI1340 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term HI1341 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) HI1342 PF12848 ABC transporter HI1342 PF16326 ABC transporter C-terminal domain HI1342 PF00005 ABC transporter HI1343 PF00266 Aminotransferase class-V HI1344 PF13416 Bacterial extracellular solute-binding protein HI1345 PF00528 Binding-protein-dependent transport system inner membrane component HI1346 PF00528 Binding-protein-dependent transport system inner membrane component HI1347 PF00005 ABC transporter HI1347 PF08402 TOBE domain HI1348 PF01546 Peptidase family M20/M25/M40 HI1348 PF07687 Peptidase dimerisation domain HI1349 PF00210 Ferritin-like domain HI1350 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region HI1350 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HI1351 PF08003 Protein of unknown function (DUF1698) HI1352 PF00474 Sodium:solute symporter family HI1353 PF00575 S1 RNA binding domain HI1353 PF10150 Ribonuclease E/G family HI1354 PF00749 tRNA synthetases class I (E and Q), catalytic domain HI1354 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain HI1355 PF03692 Putative zinc- or iron-chelating domain HI1356 PF02446 4-alpha-glucanotransferase HI1357 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HI1357 PF02806 Alpha amylase, C-terminal all-beta domain HI1357 PF00128 Alpha amylase, catalytic domain HI1358 PF18390 Glycogen debranching enzyme C-terminal domain HI1358 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HI1358 PF00128 Alpha amylase, catalytic domain HI1359 PF00483 Nucleotidyl transferase HI1360 PF00534 Glycosyl transferases group 1 HI1360 PF08323 Starch synthase catalytic domain HI1361 PF00343 Carbohydrate phosphorylase HI1362 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HI1362 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HI1362 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch HI1363 PF02233 NAD(P) transhydrogenase beta subunit HI1364 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HI1364 PF03466 LysR substrate binding domain HI1365 PF08272 Topoisomerase I zinc-ribbon-like HI1365 PF01396 Topoisomerase DNA binding C4 zinc finger HI1365 PF01751 Toprim domain HI1365 PF01131 DNA topoisomerase HI1366 PF02525 Flavodoxin-like fold HI1367 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HI1367 PF02824 TGS domain HI1367 PF03129 Anticodon binding domain HI1367 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HI1368 PF05193 Peptidase M16 inactive domain HI1368 PF00675 Insulinase (Peptidase family M16) HI1369 PF07715 TonB-dependent Receptor Plug Domain HI1370 PF03459 TOBE domain HI1371 PF04358 DsrC like protein HI1371.1 PF01171 PP-loop family HI1372 PF03882 MukF winged-helix domain HI1372 PF17192 MukF middle domain HI1372 PF17193 MukF C-terminal domain HI1373 PF04288 MukE-like family HI1374 PF16330 MukB hinge domain HI1374 PF04310 MukB N-terminal HI1377 PF08411 Exonuclease C-terminal HI1377 PF00929 Exonuclease HI1378 PF00512 His Kinase A (phospho-acceptor) domain HI1378 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HI1379 PF00486 Transcriptional regulatory protein, C terminal HI1379 PF00072 Response regulator receiver domain HI1381 PF00528 Binding-protein-dependent transport system inner membrane component HI1382 PF00528 Binding-protein-dependent transport system inner membrane component HI1384 PF00210 Ferritin-like domain HI1385 PF00210 Ferritin-like domain HI1387 PF04715 Anthranilate synthase component I, N terminal region HI1387 PF00425 chorismate binding enzyme HI1388 PF00117 Glutamine amidotransferase class-I HI1388.1 PF14552 Tautomerase enzyme HI1389 PF02885 Glycosyl transferase family, helical bundle domain HI1389 PF00591 Glycosyl transferase family, a/b domain HI1389.1 PF00218 Indole-3-glycerol phosphate synthase HI1389.1 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HI1391 PF08264 Anticodon-binding domain of tRNA HI1391 PF00133 tRNA synthetases class I (I, L, M and V) HI1391 PF10458 Valyl tRNA synthetase tRNA binding arm HI1392 PF01555 DNA methylase HI1393 PF09518 HindIII restriction endonuclease HI1394 PF04266 ASCH domain HI1397 PF04364 DNA polymerase III chi subunit, HolC HI1398 PF00206 Lyase HI1398 PF10415 Fumarase C C-terminus HI1399 PF16036 Chalcone isomerase-like HI1400 PF02811 PHP domain HI1401 PF01180 Dihydroorotate dehydrogenase HI1403 PF03406 Phage tail fibre repeat HI1405 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) HI1406 PF10711 Hypothetical protein (DUF2513) HI1407 PF04233 Phage Mu protein F like protein HI1409 PF06381 Protein of unknown function (DUF1073) HI1410 PF04466 Phage terminase large subunit HI1410 PF17288 Terminase RNAseH like domain HI1411 PF03592 Terminase small subunit HI1412 PF09669 Phage regulatory protein Rha (Phage_pRha) HI1412 PF10549 ORF11CD3 domain HI1414 PF10828 Protein of unknown function (DUF2570) HI1415 PF00182 Chitinase class I HI1416 PF05106 Phage holin family (Lysis protein S) HI1418 PF02498 BRO family, N-terminal domain HI1418 PF10548 P22AR C-terminal domain HI1419 PF05973 Phage derived protein Gp49-like (DUF891) HI1420 PF01381 Helix-turn-helix HI1422 PF10548 P22AR C-terminal domain HI1422 PF08346 AntA/AntB antirepressor HI1424 PF00589 Phage integrase family HI1425 PF13545 Crp-like helix-turn-helix domain HI1425 PF00027 Cyclic nucleotide-binding domain HI1426 PF00582 Universal stress protein family HI1427 PF10670 Domain of unknown function (DUF4198) HI1428 PF00551 Formyl transferase HI1429 PF02769 AIR synthase related protein, C-terminal domain HI1429 PF00586 AIR synthase related protein, N-terminal domain HI1430 PF00106 short chain dehydrogenase HI1431 PF00291 Pyridoxal-phosphate dependent enzyme HI1432 PF00290 Tryptophan synthase alpha chain HI1434 PF04073 Aminoacyl-tRNA editing domain HI1434.1 PF00313 'Cold-shock' DNA-binding domain HI1434.2 PF03701 Uncharacterised protein family (UPF0181) HI1436 PF04287 tRNA pseudouridine synthase C HI1437 PF02609 Exonuclease VII small subunit HI1438 PF00348 Polyprenyl synthetase HI1439 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HI1439 PF02779 Transketolase, pyrimidine binding domain HI1439 PF02780 Transketolase, C-terminal domain HI1440 PF04386 Stringent starvation protein B HI1441 PF02798 Glutathione S-transferase, N-terminal domain HI1441 PF00043 Glutathione S-transferase, C-terminal domain HI1442 PF00380 Ribosomal protein S9/S16 HI1443 PF00572 Ribosomal protein L13 HI1444 PF02219 Methylenetetrahydrofolate reductase HI1446 PF05166 YcgL domain HI1447 PF01227 GTP cyclohydrolase I HI1448 PF03453 MoeA N-terminal region (domain I and II) HI1448 PF00994 Probable molybdopterin binding domain HI1448 PF03454 MoeA C-terminal region (domain IV) HI1449 PF00899 ThiF family HI1450 PF04269 Protein of unknown function, DUF440 HI1452 PF03956 Lysine exporter LysO HI1453 PF08534 Redoxin HI1454 PF02683 Cytochrome C biogenesis protein transmembrane region HI1455 PF01625 Peptide methionine sulfoxide reductase HI1455 PF01641 SelR domain HI1456 PF11008 Protein of unknown function (DUF2846) HI1457 PF02462 Opacity family porin protein HI1459 PF04542 Sigma-70 region 2 HI1459 PF08281 Sigma-70, region 4 HI1462 PF02321 Outer membrane efflux protein HI1462.2 PF00300 Histidine phosphatase superfamily (branch 1) HI1463 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HI1463 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HI1463 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HI1463 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HI1464 PF00809 Pterin binding enzyme HI1465 PF01434 Peptidase family M41 HI1465 PF06480 FtsH Extracellular HI1465 PF17862 AAA+ lid domain HI1465 PF00004 ATPase family associated with various cellular activities (AAA) HI1467 PF06472 ABC transporter transmembrane region 2 HI1467 PF00005 ABC transporter HI1468 PF00312 Ribosomal protein S15 HI1470 PF00005 ABC transporter HI1471 PF01032 FecCD transport family HI1472 PF01497 Periplasmic binding protein HI1473 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HI1473 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HI1474 PF00005 ABC transporter HI1475 PF00528 Binding-protein-dependent transport system inner membrane component HI1476 PF01381 Helix-turn-helix HI1476 PF00717 Peptidase S24-like HI1477 PF13693 Winged helix-turn-helix DNA-binding HI1478 PF09299 Mu transposase, C-terminal HI1478 PF02316 Mu DNA-binding domain HI1478 PF02914 Bacteriophage Mu transposase HI1478 PF09039 Mu DNA binding, I gamma subdomain HI1479 PF09039 Mu DNA binding, I gamma subdomain HI1481 PF09077 Mu B transposition protein, C terminal HI1481 PF13401 AAA domain HI1483 PF07352 Bacteriophage Mu Gam like protein HI1487 PF17457 Family of unknown function (DUF5420) HI1488 PF06252 Protein of unknown function (DUF1018) HI1495 PF10841 Protein of unknown function (DUF2644) HI1496 PF10883 Protein of unknown function (DUF2681) HI1497 PF01258 Prokaryotic dksA/traR C4-type zinc finger HI1498 PF10805 Protein of unknown function (DUF2730) HI1498.1 PF08461 Ribonuclease R winged-helix domain HI1499 PF11985 Protein of unknown function (DUF3486) HI1500 PF03237 Terminase-like family HI1501 PF06074 Protein of unknown function (DUF935) HI1502 PF04233 Phage Mu protein F like protein HI1503 PF05069 Phage virion morphogenesis family HI1504 PF10123 Mu-like prophage I protein HI1505 PF10124 Mu-like prophage major head subunit gpT HI1508 PF07030 Protein of unknown function (DUF1320) HI1509 PF08873 Domain of unknown function (DUF1834) HI1510 PF10948 Protein of unknown function (DUF2635) HI1511 PF04984 Phage tail sheath protein subtilisin-like domain HI1511 PF17482 Phage tail sheath C-terminal domain HI1512 PF10618 Phage tail tube protein HI1513 PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 HI1515 PF07157 DNA circularisation protein N-terminus HI1518 PF06890 Bacteriophage Mu Gp45 protein HI1519 PF07409 Phage protein GP46 HI1520 PF04865 Baseplate J-like protein HI1521 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) HI1522.1 PF10122 Mu-like prophage protein Com HI1526 PF00294 pfkB family carbohydrate kinase HI1526 PF01467 Cytidylyltransferase-like HI1527 PF03279 Bacterial lipid A biosynthesis acyltransferase HI1528 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HI1528 PF00986 DNA gyrase B subunit, carboxyl terminus HI1528 PF00204 DNA gyrase B HI1528 PF01751 Toprim domain HI1529 PF03989 DNA gyrase C-terminal domain, beta-propeller HI1529 PF00521 DNA gyrase/topoisomerase IV, subunit A HI1530 PF03616 Sodium/glutamate symporter HI1531 PF08443 RimK-like ATP-grasp domain HI1531 PF18030 RimK PreATP-grasp domain HI1532 PF00462 Glutaredoxin HI1533 PF02801 Beta-ketoacyl synthase, C-terminal domain HI1533 PF00109 Beta-ketoacyl synthase, N-terminal domain HI1538 PF00892 EamA-like transporter family HI1539 PF12804 MobA-like NTP transferase domain HI1540 PF04991 LicD family HI1541 PF01343 Peptidase family S49 HI1542 PF00881 Nitroreductase family HI1544 PF02525 Flavodoxin-like fold HI1545 PF00375 Sodium:dicarboxylate symporter family HI1546 PF00717 Peptidase S24-like HI1547 PF00793 DAHP synthetase I family HI1548 PF12704 MacB-like periplasmic core domain HI1548 PF02687 FtsX-like permease family HI1549 PF00005 ABC transporter HI1551 PF08241 Methyltransferase domain HI1552 PF04301 Protein of unknown function (DUF452) HI1553 PF00155 Aminotransferase class I and II HI1554 PF00202 Aminotransferase class-III HI1555 PF12704 MacB-like periplasmic core domain HI1555 PF02687 FtsX-like permease family HI1556 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HI1556 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HI1557 PF00793 DAHP synthetase I family HI1558 PF13369 Transglutaminase-like superfamily HI1559 PF13847 Methyltransferase domain HI1559 PF17827 PrmC N-terminal domain HI1560 PF06271 RDD family HI1561 PF03462 PCRF domain HI1561 PF00472 RF-1 domain HI1563 PF04315 Elongation factor P hydroxylase HI1568 PF05069 Phage virion morphogenesis family HI1571 PF06074 Protein of unknown function (DUF935) HI1573 PF02887 Pyruvate kinase, alpha/beta domain HI1573 PF00224 Pyruvate kinase, barrel domain HI1574 PF00772 DnaB-like helicase N terminal domain HI1574 PF03796 DnaB-like helicase C terminal domain HI1575 PF01168 Alanine racemase, N-terminal domain HI1575 PF00842 Alanine racemase, C-terminal domain HI1576 PF00342 Phosphoglucose isomerase HI1578 PF00535 Glycosyl transferase family 2 HI1579 PF05433 Glycine zipper 2TM domain HI1583 PF00750 tRNA synthetases class I (R) HI1583 PF03485 Arginyl tRNA synthetase N terminal domain HI1583 PF05746 DALR anticodon binding domain HI1584 PF10369 Small subunit of acetolactate synthase HI1585 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HI1585 PF00205 Thiamine pyrophosphate enzyme, central domain HI1585 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HI1586 PF03553 Na+/H+ antiporter family HI1587 PF00816 H-NS histone family HI1588 PF01842 ACT domain HI1588 PF00551 Formyl transferase HI1589 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HI1590 PF00004 ATPase family associated with various cellular activities (AAA) HI1590 PF16193 AAA C-terminal domain HI1590 PF12002 MgsA AAA+ ATPase C terminal HI1591 PF03548 Outer membrane lipoprotein carrier protein LolA HI1596 PF01037 Lrp/AsnC ligand binding domain HI1597 PF18073 Rubredoxin metal binding domain HI1598 PF01928 CYTH domain HI1599 PF09836 Putative DNA-binding domain HI1600 PF05114 Protein of unknown function (DUF692) HI1602 PF07681 DoxX HI1603 PF01865 Protein of unknown function DUF47 HI1604 PF01384 Phosphate transporter family HI1605 PF08239 Bacterial SH3 domain HI1606 PF01743 Poly A polymerase head domain HI1606 PF01966 HD domain HI1606 PF12627 Probable RNA and SrmB- binding site of polymerase A HI1607 PF03550 Outer membrane lipoprotein LolB HI1608 PF00288 GHMP kinases N terminal domain HI1608 PF08544 GHMP kinases C terminal HI1609 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HI1609 PF14572 Phosphoribosyl synthetase-associated domain HI1610 PF00579 tRNA synthetases class I (W and Y) HI1610 PF01479 S4 domain HI1611 PF03749 Sugar fermentation stimulation protein RE domain HI1611 PF17746 SfsA N-terminal OB domain HI1612 PF01554 MatE HI1613 PF00677 Lumazine binding domain HI1614 PF17432 Domain of unknown function (DUF3458_C) ARM repeats HI1614 PF11940 Domain of unknown function (DUF3458) Ig-like fold HI1614 PF01433 Peptidase family M1 domain HI1615 PF00731 AIR carboxylase HI1616 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HI1616 PF02222 ATP-grasp domain HI1617 PF00155 Aminotransferase class I and II HI1617.1 PF00586 AIR synthase related protein, N-terminal domain HI1617.1 PF02769 AIR synthase related protein, C-terminal domain HI1618 PF00005 ABC transporter HI1621 PF01891 Cobalt uptake substrate-specific transmembrane region HI1623 PF13411 MerR HTH family regulatory protein HI1624 PF10670 Domain of unknown function (DUF4198) HI1625 PF08238 Sel1 repeat HI1626 PF14256 YwiC-like protein HI1627 PF01042 Endoribonuclease L-PSP HI1628 PF06295 Protein of unknown function (DUF1043) HI1629 PF09335 SNARE associated Golgi protein HI1630 PF01386 Ribosomal L25p family HI1631 PF10881 Protein of unknown function (DUF2726) HI1632 PF00696 Amino acid kinase family HI1633 PF00709 Adenylosuccinate synthetase HI1634 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal HI1634 PF00132 Bacterial transferase hexapeptide (six repeats) HI1634 PF14602 Hexapeptide repeat of succinyl-transferase HI1635 PF00356 Bacterial regulatory proteins, lacI family HI1636 PF00311 Phosphoenolpyruvate carboxylase HI1637 PF04317 YcjX-like family, DUF463 HI1638 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HI1639 PF00528 Binding-protein-dependent transport system inner membrane component HI1640 PF12911 N-terminal TM domain of oligopeptide transport permease C HI1640 PF00528 Binding-protein-dependent transport system inner membrane component HI1641 PF00005 ABC transporter HI1641 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HI1642 PF00005 ABC transporter HI1643 PF03601 Conserved hypothetical protein 698 HI1644 PF01416 tRNA pseudouridine synthase HI1645 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HI1646m PF02224 Cytidylate kinase HI1647 PF01680 SOR/SNZ family HI1648 PF01174 SNO glutamine amidotransferase family HI1649 PF01565 FAD binding domain HI1649 PF09330 D-lactate dehydrogenase, membrane binding HI1652 PF00877 NlpC/P60 family HI1654 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HI1655 PF04348 LppC putative lipoprotein HI1656 PF02021 Uncharacterised protein family UPF0102 HI1657 PF13580 SIS domain HI1658 PF04972 BON domain HI1659 PF02867 Ribonucleotide reductase, barrel domain HI1659 PF00317 Ribonucleotide reductase, all-alpha domain HI1659 PF03477 ATP cone domain HI1660 PF00268 Ribonucleotide reductase, small chain HI1661 PF02817 e3 binding domain HI1661 PF00364 Biotin-requiring enzyme HI1661 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HI1662 PF16078 2-oxoglutarate dehydrogenase N-terminus HI1662 PF00676 Dehydrogenase E1 component HI1662 PF02779 Transketolase, pyrimidine binding domain HI1662 PF16870 2-oxoglutarate dehydrogenase C-terminal HI1663 PF00753 Metallo-beta-lactamase superfamily HI1664 PF01026 TatD related DNase HI1667 PF03734 L,D-transpeptidase catalytic domain HI1668 PF00595 PDZ domain HI1668 PF03572 Peptidase family S41 HI1668 PF11818 C-terminal domain of tail specific protease (DUF3340) HI1668 PF17804 Tail specific protease N-terminal domain HI1670 PF17516 ProQ C-terminal domain HI1670 PF04352 ProQ/FINO family HI1671 PF04403 Paraquat-inducible protein A HI1672 PF02470 MlaD protein HI1673 PF02391 MoaE protein HI1674 PF02597 ThiS family HI1675 PF01967 MoaC family HI1676 PF06463 Molybdenum Cofactor Synthesis C HI1676 PF04055 Radical SAM superfamily HI1677 PF01814 Hemerythrin HHE cation binding domain HI1677 PF04405 Domain of Unknown function (DUF542) HI1678 PF01380 SIS domain HI1678 PF00571 CBS domain HI1680 PF12805 FUSC-like inner membrane protein yccS HI1681 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) HI1682 PF08496 Peptidase family S49 N-terminal HI1682 PF01343 Peptidase family S49 HI1683 PF02508 Rnf-Nqr subunit, membrane protein HI1684 PF04060 Putative Fe-S cluster HI1685 PF10531 SLBB domain HI1685 PF13375 RnfC Barrel sandwich hybrid domain HI1685 PF12838 4Fe-4S dicluster domain HI1685 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HI1686 PF03116 NQR2, RnfD, RnfE family HI1687 PF04205 FMN-binding domain HI1688 PF02508 Rnf-Nqr subunit, membrane protein HI1689 PF00633 Helix-hairpin-helix motif HI1689 PF00730 HhH-GPD superfamily base excision DNA repair protein HI1689 PF10576 Iron-sulfur binding domain of endonuclease III HI1690 PF00209 Sodium:neurotransmitter symporter family HI1691 PF00005 ABC transporter HI1691 PF03459 TOBE domain HI1692 PF00528 Binding-protein-dependent transport system inner membrane component HI1694 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HI1694 PF03459 TOBE domain HI1695 PF00535 Glycosyl transferase family 2 HI1696 PF00535 Glycosyl transferase family 2 HI1697 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) HI1698 PF00534 Glycosyl transferases group 1 HI1698 PF13439 Glycosyltransferase Family 4 HI1699 PF07922 Glycosyltransferase family 52 HI1700 PF01943 Polysaccharide biosynthesis protein HI1701 PF02698 DUF218 domain HI1702 PF08267 Cobalamin-independent synthase, N-terminal domain HI1702 PF01717 Cobalamin-independent synthase, Catalytic domain HI1703 PF03739 Lipopolysaccharide export system permease LptF/LptG HI1704 PF03739 Lipopolysaccharide export system permease LptF/LptG HI1705 PF00883 Cytosol aminopeptidase family, catalytic domain HI1705 PF02789 Cytosol aminopeptidase family, N-terminal domain HI1706 PF02028 BCCT, betaine/carnitine/choline family transporter HI1707 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HI1707 PF08521 Two-component sensor kinase N-terminal HI1707 PF00512 His Kinase A (phospho-acceptor) domain HI1708 PF00072 Response regulator receiver domain HI1708 PF00486 Transcriptional regulatory protein, C terminal HI1709 PF04076 Bacterial OB fold (BOF) protein HI1711 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HI1712 PF05524 PEP-utilising enzyme, N-terminal HI1712 PF00391 PEP-utilising enzyme, mobile domain HI1712 PF02896 PEP-utilising enzyme, TIM barrel domain HI1713 PF00381 PTS HPr component phosphorylation site HI1714 PF03193 RsgA GTPase HI1715 PF00929 Exonuclease HI1716 PF00953 Glycosyl transferase family 4 HI1719 PF01966 HD domain HI1719 PF01842 ACT domain HI1719 PF08335 GlnD PII-uridylyltransferase HI1721 PF13333 Integrase core domain HI1721 PF00665 Integrase core domain HI1722 PF00557 Metallopeptidase family M24 HI1723 PF01521 Iron-sulphur cluster biosynthesis HI1724 PF06062 Uncharacterised protein family (UPF0231) HI1725 PF00912 Transglycosylase HI1725 PF00905 Penicillin binding protein transpeptidase domain HI1725 PF14814 Bifunctional transglycosylase second domain HI1726 PF01259 SAICAR synthetase HI1727 PF00764 Arginosuccinate synthase HI1728 PF01566 Natural resistance-associated macrophage protein HI1729m PF03746 LamB/YcsF family HI1730 PF02626 Carboxyltransferase domain, subdomain A and B HI1731 PF02682 Carboxyltransferase domain, subdomain C and D HI1731a PF03895 YadA-like membrane anchor domain HI1731a PF13018 Extended Signal Peptide of Type V secretion system HI1731a PF05662 Coiled stalk of trimeric autotransporter adhesin HI1731a PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin HI1732 PF13018 Extended Signal Peptide of Type V secretion system HI1732 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin HI1732 PF03895 YadA-like membrane anchor domain HI1732 PF05662 Coiled stalk of trimeric autotransporter adhesin HI1733 PF00773 RNB domain HI1733 PF08206 Ribonuclease B OB domain HI1733 PF00575 S1 RNA binding domain HI1735 PF00009 Elongation factor Tu GTP binding domain HI1735 PF16658 Class II release factor RF3, C-terminal domain HI1735 PF03144 Elongation factor Tu domain 2 HI1736 PF10688 Bacterial inner membrane protein HI1737 PF05437 Branched-chain amino acid transport protein (AzlD) HI1738 PF03591 AzlC protein HI1739 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HI1739 PF03466 LysR substrate binding domain HI1739.1 PF01070 FMN-dependent dehydrogenase HI1739.2 PF01177 Asp/Glu/Hydantoin racemase HI1740 PF17191 RecG wedge domain HI1740 PF00270 DEAD/DEAH box helicase HI1740 PF00271 Helicase conserved C-terminal domain HI1741 PF02824 TGS domain HI1741 PF04607 Region found in RelA / SpoT proteins HI1741 PF13291 ACT domain HI1742 PF01192 RNA polymerase Rpb6 HI1743 PF00625 Guanylate kinase