locus-tag class description LOKO_RS00015 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LOKO_RS00015 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LOKO_RS00035 PF00248 Aldo/keto reductase family LOKO_RS00055 PF13458 Periplasmic binding protein LOKO_RS00065 PF02653 Branched-chain amino acid transport system / permease component LOKO_RS00070 PF00005 ABC transporter LOKO_RS00075 PF12399 Branched-chain amino acid ATP-binding cassette transporter LOKO_RS00075 PF00005 ABC transporter LOKO_RS00080 PF00209 Sodium:neurotransmitter symporter family LOKO_RS00090 PF01380 SIS domain LOKO_RS00090 PF01418 Helix-turn-helix domain, rpiR family LOKO_RS00095 PF01970 Tripartite tricarboxylate transporter TctA family LOKO_RS00105 PF00120 Glutamine synthetase, catalytic domain LOKO_RS00105 PF03951 Glutamine synthetase, beta-Grasp domain LOKO_RS00115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOKO_RS00115 PF00512 His Kinase A (phospho-acceptor) domain LOKO_RS00115 PF00989 PAS fold LOKO_RS00120 PF02954 Bacterial regulatory protein, Fis family LOKO_RS00120 PF00158 Sigma-54 interaction domain LOKO_RS00120 PF00072 Response regulator receiver domain LOKO_RS00125 PF01966 HD domain LOKO_RS00135 PF02146 Sir2 family LOKO_RS00145 PF01253 Translation initiation factor SUI1 LOKO_RS00150 PF13419 Haloacid dehalogenase-like hydrolase LOKO_RS00175 PF01116 Fructose-bisphosphate aldolase class-II LOKO_RS00180 PF00162 Phosphoglycerate kinase LOKO_RS00185 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LOKO_RS00185 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LOKO_RS00190 PF04172 LrgB-like family LOKO_RS00200 PF00011 Hsp20/alpha crystallin family LOKO_RS00205 PF00011 Hsp20/alpha crystallin family LOKO_RS00210 PF01791 DeoC/LacD family aldolase LOKO_RS00215 PF00456 Transketolase, thiamine diphosphate binding domain LOKO_RS00215 PF02779 Transketolase, pyrimidine binding domain LOKO_RS00215 PF02780 Transketolase, C-terminal domain LOKO_RS00220 PF00438 S-adenosylmethionine synthetase, N-terminal domain LOKO_RS00220 PF02772 S-adenosylmethionine synthetase, central domain LOKO_RS00220 PF02773 S-adenosylmethionine synthetase, C-terminal domain LOKO_RS00225 PF05221 S-adenosyl-L-homocysteine hydrolase LOKO_RS00225 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LOKO_RS00245 PF02219 Methylenetetrahydrofolate reductase LOKO_RS00250 PF00080 Copper/zinc superoxide dismutase (SODC) LOKO_RS00270 PF02690 Na+/Pi-cotransporter LOKO_RS00280 PF01432 Peptidase family M3 LOKO_RS00285 PF00209 Sodium:neurotransmitter symporter family LOKO_RS00290 PF00132 Bacterial transferase hexapeptide (six repeats) LOKO_RS00300 PF00158 Sigma-54 interaction domain LOKO_RS00300 PF00072 Response regulator receiver domain LOKO_RS00300 PF02954 Bacterial regulatory protein, Fis family LOKO_RS00305 PF02743 Cache domain LOKO_RS00305 PF00512 His Kinase A (phospho-acceptor) domain LOKO_RS00305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOKO_RS00310 PF07729 FCD domain LOKO_RS00310 PF00392 Bacterial regulatory proteins, gntR family LOKO_RS00315 PF02754 Cysteine-rich domain LOKO_RS00320 PF02589 LUD domain LOKO_RS00320 PF13183 4Fe-4S dicluster domain LOKO_RS00320 PF11870 Domain of unknown function (DUF3390) LOKO_RS00325 PF02589 LUD domain LOKO_RS00340 PF04186 FxsA cytoplasmic membrane protein LOKO_RS00355 PF01329 Pterin 4 alpha carbinolamine dehydratase LOKO_RS00360 PF00351 Biopterin-dependent aromatic amino acid hydroxylase LOKO_RS00365 PF00158 Sigma-54 interaction domain LOKO_RS00365 PF18024 Helix-turn-helix domain LOKO_RS00370 PF09382 RQC domain LOKO_RS00370 PF16124 RecQ zinc-binding LOKO_RS00370 PF00270 DEAD/DEAH box helicase LOKO_RS00370 PF00271 Helicase conserved C-terminal domain LOKO_RS00370 PF00570 HRDC domain LOKO_RS00395 PF01910 Thiamine-binding protein LOKO_RS00400 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LOKO_RS00405 PF00989 PAS fold LOKO_RS00405 PF17203 Single cache domain 3 LOKO_RS00405 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LOKO_RS00405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOKO_RS00420 PF00795 Carbon-nitrogen hydrolase LOKO_RS00420 PF02540 NAD synthase LOKO_RS00425 PF13525 Outer membrane lipoprotein LOKO_RS00430 PF00849 RNA pseudouridylate synthase LOKO_RS00430 PF01479 S4 domain LOKO_RS00440 PF00004 ATPase family associated with various cellular activities (AAA) LOKO_RS00440 PF07724 AAA domain (Cdc48 subfamily) LOKO_RS00440 PF17871 AAA lid domain LOKO_RS00440 PF02861 Clp amino terminal domain, pathogenicity island component LOKO_RS00440 PF10431 C-terminal, D2-small domain, of ClpB protein LOKO_RS00445 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LOKO_RS00445 PF00205 Thiamine pyrophosphate enzyme, central domain LOKO_RS00445 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LOKO_RS00450 PF10369 Small subunit of acetolactate synthase LOKO_RS00455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOKO_RS00455 PF03466 LysR substrate binding domain LOKO_RS00460 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LOKO_RS00460 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LOKO_RS00465 PF01066 CDP-alcohol phosphatidyltransferase LOKO_RS00490 PF08279 HTH domain LOKO_RS00490 PF03099 Biotin/lipoate A/B protein ligase family LOKO_RS00490 PF02237 Biotin protein ligase C terminal domain LOKO_RS00495 PF03309 Type III pantothenate kinase LOKO_RS00520 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LOKO_RS00525 PF02357 Transcription termination factor nusG LOKO_RS00525 PF00467 KOW motif LOKO_RS00530 PF03946 Ribosomal protein L11, N-terminal domain LOKO_RS00530 PF00298 Ribosomal protein L11, RNA binding domain LOKO_RS00535 PF00687 Ribosomal protein L1p/L10e family LOKO_RS00540 PF00466 Ribosomal protein L10 LOKO_RS00545 PF16320 Ribosomal protein L7/L12 dimerisation domain LOKO_RS00545 PF00542 Ribosomal protein L7/L12 C-terminal domain LOKO_RS00550 PF10385 RNA polymerase beta subunit external 1 domain LOKO_RS00550 PF04560 RNA polymerase Rpb2, domain 7 LOKO_RS00550 PF00562 RNA polymerase Rpb2, domain 6 LOKO_RS00550 PF04565 RNA polymerase Rpb2, domain 3 LOKO_RS00550 PF04561 RNA polymerase Rpb2, domain 2 LOKO_RS00550 PF04563 RNA polymerase beta subunit LOKO_RS00555 PF04998 RNA polymerase Rpb1, domain 5 LOKO_RS00555 PF04997 RNA polymerase Rpb1, domain 1 LOKO_RS00555 PF00623 RNA polymerase Rpb1, domain 2 LOKO_RS00555 PF04983 RNA polymerase Rpb1, domain 3 LOKO_RS00555 PF05000 RNA polymerase Rpb1, domain 4 LOKO_RS00560 PF00164 Ribosomal protein S12/S23 LOKO_RS00565 PF00177 Ribosomal protein S7p/S5e LOKO_RS00570 PF14492 Elongation Factor G, domain II LOKO_RS00570 PF03144 Elongation factor Tu domain 2 LOKO_RS00570 PF00009 Elongation factor Tu GTP binding domain LOKO_RS00570 PF03764 Elongation factor G, domain IV LOKO_RS00570 PF00679 Elongation factor G C-terminus LOKO_RS00575 PF03144 Elongation factor Tu domain 2 LOKO_RS00575 PF03143 Elongation factor Tu C-terminal domain LOKO_RS00575 PF00009 Elongation factor Tu GTP binding domain LOKO_RS00580 PF00338 Ribosomal protein S10p/S20e LOKO_RS00585 PF00297 Ribosomal protein L3 LOKO_RS00590 PF00573 Ribosomal protein L4/L1 family LOKO_RS00595 PF00276 Ribosomal protein L23 LOKO_RS00600 PF00181 Ribosomal Proteins L2, RNA binding domain LOKO_RS00600 PF03947 Ribosomal Proteins L2, C-terminal domain LOKO_RS00605 PF00203 Ribosomal protein S19 LOKO_RS00610 PF00237 Ribosomal protein L22p/L17e LOKO_RS00615 PF07650 KH domain LOKO_RS00615 PF00189 Ribosomal protein S3, C-terminal domain LOKO_RS00620 PF00252 Ribosomal protein L16p/L10e LOKO_RS00625 PF00831 Ribosomal L29 protein LOKO_RS00630 PF00366 Ribosomal protein S17 LOKO_RS00635 PF00238 Ribosomal protein L14p/L23e LOKO_RS00640 PF00467 KOW motif LOKO_RS00640 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LOKO_RS00645 PF00281 Ribosomal protein L5 LOKO_RS00645 PF00673 ribosomal L5P family C-terminus LOKO_RS00650 PF00253 Ribosomal protein S14p/S29e LOKO_RS00655 PF00410 Ribosomal protein S8 LOKO_RS00660 PF00347 Ribosomal protein L6 LOKO_RS00665 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LOKO_RS00670 PF03719 Ribosomal protein S5, C-terminal domain LOKO_RS00670 PF00333 Ribosomal protein S5, N-terminal domain LOKO_RS00675 PF00327 Ribosomal protein L30p/L7e LOKO_RS00680 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LOKO_RS00685 PF00344 SecY translocase LOKO_RS00690 PF00444 Ribosomal protein L36 LOKO_RS00695 PF00416 Ribosomal protein S13/S18 LOKO_RS00700 PF00411 Ribosomal protein S11 LOKO_RS00705 PF00163 Ribosomal protein S4/S9 N-terminal domain LOKO_RS00705 PF01479 S4 domain LOKO_RS00710 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LOKO_RS00710 PF01000 RNA polymerase Rpb3/RpoA insert domain LOKO_RS00710 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LOKO_RS00715 PF01196 Ribosomal protein L17 LOKO_RS00720 PF17755 UvrA DNA-binding domain LOKO_RS00720 PF17760 UvrA interaction domain LOKO_RS00725 PF07690 Major Facilitator Superfamily LOKO_RS00730 PF00436 Single-strand binding protein family LOKO_RS00745 PF02801 Beta-ketoacyl synthase, C-terminal domain LOKO_RS00745 PF00109 Beta-ketoacyl synthase, N-terminal domain LOKO_RS00750 PF07977 FabA-like domain LOKO_RS00755 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS00755 PF03707 Bacterial signalling protein N terminal repeat LOKO_RS00755 PF00563 EAL domain LOKO_RS00775 PF00106 short chain dehydrogenase LOKO_RS00785 PF00875 DNA photolyase LOKO_RS00785 PF03441 FAD binding domain of DNA photolyase LOKO_RS00790 PF13411 MerR HTH family regulatory protein LOKO_RS00795 PF01593 Flavin containing amine oxidoreductase LOKO_RS00800 PF08338 Domain of unknown function (DUF1731) LOKO_RS00800 PF01370 NAD dependent epimerase/dehydratase family LOKO_RS00805 PF00271 Helicase conserved C-terminal domain LOKO_RS00805 PF12137 RNA polymerase recycling family C-terminal LOKO_RS00805 PF00176 SNF2 family N-terminal domain LOKO_RS00805 PF18337 RapA N-terminal Tudor like domain LOKO_RS00805 PF18339 RapA N-terminal Tudor like domain 1 LOKO_RS00810 PF00578 AhpC/TSA family LOKO_RS00820 PF13091 PLD-like domain LOKO_RS00825 PF00939 Sodium:sulfate symporter transmembrane region LOKO_RS00830 PF13426 PAS domain LOKO_RS00830 PF05231 MASE1 LOKO_RS00830 PF08447 PAS fold LOKO_RS00830 PF08448 PAS fold LOKO_RS00830 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS00830 PF00563 EAL domain LOKO_RS00840 PF00348 Polyprenyl synthetase LOKO_RS00845 PF00829 Ribosomal prokaryotic L21 protein LOKO_RS00850 PF01016 Ribosomal L27 protein LOKO_RS00855 PF01018 GTP1/OBG LOKO_RS00855 PF01926 50S ribosome-binding GTPase LOKO_RS00860 PF01472 PUA domain LOKO_RS00860 PF00696 Amino acid kinase family LOKO_RS00865 PF01649 Ribosomal protein S20 LOKO_RS00870 PF03023 Lipid II flippase MurJ LOKO_RS00875 PF06574 FAD synthetase LOKO_RS00875 PF01687 Riboflavin kinase LOKO_RS00880 PF08264 Anticodon-binding domain of tRNA LOKO_RS00880 PF00133 tRNA synthetases class I (I, L, M and V) LOKO_RS00880 PF06827 Zinc finger found in FPG and IleRS LOKO_RS00885 PF01252 Signal peptidase (SPase) II LOKO_RS00890 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LOKO_RS00895 PF02401 LytB protein LOKO_RS00900 PF07963 Prokaryotic N-terminal methylation motif LOKO_RS00900 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor LOKO_RS00915 PF00440 Bacterial regulatory proteins, tetR family LOKO_RS00920 PF00109 Beta-ketoacyl synthase, N-terminal domain LOKO_RS00920 PF02801 Beta-ketoacyl synthase, C-terminal domain LOKO_RS00930 PF02798 Glutathione S-transferase, N-terminal domain LOKO_RS00930 PF00043 Glutathione S-transferase, C-terminal domain LOKO_RS00940 PF00360 Phytochrome region LOKO_RS00940 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS00940 PF00563 EAL domain LOKO_RS00940 PF01590 GAF domain LOKO_RS00950 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding LOKO_RS00950 PF18381 YcaO cyclodehydratase C-terminal domain LOKO_RS00965 PF00106 short chain dehydrogenase LOKO_RS00970 PF02163 Peptidase family M50 LOKO_RS00970 PF00571 CBS domain LOKO_RS00985 PF00085 Thioredoxin LOKO_RS01005 PF05698 Bacterial trigger factor protein (TF) C-terminus LOKO_RS01010 PF00005 ABC transporter LOKO_RS01015 PF01061 ABC-2 type transporter LOKO_RS01020 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS01020 PF05230 MASE2 domain LOKO_RS01025 PF04245 37-kD nucleoid-associated bacterial protein LOKO_RS01030 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LOKO_RS01030 PF00117 Glutamine amidotransferase class-I LOKO_RS01035 PF00664 ABC transporter transmembrane region LOKO_RS01035 PF00005 ABC transporter LOKO_RS01045 PF02203 Tar ligand binding domain homologue LOKO_RS01045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LOKO_RS01045 PF00672 HAMP domain LOKO_RS01050 PF13005 zinc-finger binding domain of transposase IS66 LOKO_RS01050 PF13817 IS66 C-terminal element LOKO_RS01050 PF13007 Transposase C of IS166 homeodomain LOKO_RS01050 PF03050 Transposase IS66 family LOKO_RS01055 PF02254 TrkA-N domain LOKO_RS01055 PF02080 TrkA-C domain LOKO_RS01060 PF07311 Dodecin LOKO_RS01065 PF01189 16S rRNA methyltransferase RsmB/F LOKO_RS01065 PF01029 NusB family LOKO_RS01070 PF02911 Formyl transferase, C-terminal domain LOKO_RS01070 PF00551 Formyl transferase LOKO_RS01075 PF01327 Polypeptide deformylase LOKO_RS01085 PF17782 DprA winged helix domain LOKO_RS01085 PF02481 DNA recombination-mediator protein A LOKO_RS01090 PF01300 Telomere recombination LOKO_RS01095 PF01218 Coproporphyrinogen III oxidase LOKO_RS01100 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LOKO_RS01100 PF01488 Shikimate / quinate 5-dehydrogenase LOKO_RS01100 PF08501 Shikimate dehydrogenase substrate binding domain LOKO_RS01105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LOKO_RS01110 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS01115 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS01115 PF12911 N-terminal TM domain of oligopeptide transport permease C LOKO_RS01120 PF00005 ABC transporter LOKO_RS01120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LOKO_RS01135 PF01435 Peptidase family M48 LOKO_RS01150 PF01926 50S ribosome-binding GTPase LOKO_RS01150 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LOKO_RS01155 PF13360 PQQ-like domain LOKO_RS01160 PF09976 Tetratricopeptide repeat-like domain LOKO_RS01165 PF03129 Anticodon binding domain LOKO_RS01165 PF13393 Histidyl-tRNA synthetase LOKO_RS01170 PF04551 GcpE protein LOKO_RS01185 PF04055 Radical SAM superfamily LOKO_RS01190 PF00334 Nucleoside diphosphate kinase LOKO_RS01195 PF01521 Iron-sulphur cluster biosynthesis LOKO_RS01200 PF00266 Aminotransferase class-V LOKO_RS01205 PF02082 Transcriptional regulator LOKO_RS01210 PF00132 Bacterial transferase hexapeptide (six repeats) LOKO_RS01215 PF00588 SpoU rRNA Methylase family LOKO_RS01220 PF00459 Inositol monophosphatase family LOKO_RS01225 PF02355 Protein export membrane protein LOKO_RS01225 PF07549 SecD/SecF GG Motif LOKO_RS01230 PF02355 Protein export membrane protein LOKO_RS01230 PF07549 SecD/SecF GG Motif LOKO_RS01230 PF13721 SecD export protein N-terminal TM region LOKO_RS01235 PF02699 Preprotein translocase subunit LOKO_RS01240 PF01702 Queuine tRNA-ribosyltransferase LOKO_RS01245 PF02547 Queuosine biosynthesis protein LOKO_RS01320 PF01272 Transcription elongation factor, GreA/GreB, C-term LOKO_RS01320 PF14760 Rnk N-terminus LOKO_RS01330 PF00563 EAL domain LOKO_RS01330 PF01590 GAF domain LOKO_RS01330 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS01330 PF00360 Phytochrome region LOKO_RS01335 PF18158 Adaptive response protein AidB N-terminal domain LOKO_RS01335 PF02770 Acyl-CoA dehydrogenase, middle domain LOKO_RS01335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LOKO_RS01340 PF00293 NUDIX domain LOKO_RS01345 PF07726 ATPase family associated with various cellular activities (AAA) LOKO_RS01345 PF17863 AAA lid domain LOKO_RS01355 PF01841 Transglutaminase-like superfamily LOKO_RS01355 PF13559 Domain of unknown function (DUF4129) LOKO_RS01355 PF11992 Domain of unknown function (DUF3488) LOKO_RS01360 PF00255 Glutathione peroxidase LOKO_RS01370 PF07055 Enoyl reductase FAD binding domain LOKO_RS01370 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LOKO_RS01370 PF12241 Trans-2-enoyl-CoA reductase catalytic region LOKO_RS01380 PF12833 Helix-turn-helix domain LOKO_RS01385 PF01209 ubiE/COQ5 methyltransferase family LOKO_RS01390 PF00202 Aminotransferase class-III LOKO_RS01395 PF04958 Arginine N-succinyltransferase beta subunit LOKO_RS01400 PF04958 Arginine N-succinyltransferase beta subunit LOKO_RS01405 PF00171 Aldehyde dehydrogenase family LOKO_RS01410 PF04996 Succinylarginine dihydrolase LOKO_RS01425 PF01145 SPFH domain / Band 7 family LOKO_RS01445 PF00155 Aminotransferase class I and II LOKO_RS01450 PF08240 Alcohol dehydrogenase GroES-like domain LOKO_RS01450 PF00107 Zinc-binding dehydrogenase LOKO_RS01460 PF03458 UPF0126 domain LOKO_RS01475 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS01475 PF08448 PAS fold LOKO_RS01475 PF00563 EAL domain LOKO_RS01520 PF03992 Antibiotic biosynthesis monooxygenase LOKO_RS01525 PF03572 Peptidase family S41 LOKO_RS01525 PF14685 Tricorn protease PDZ domain LOKO_RS01525 PF07676 WD40-like Beta Propeller Repeat LOKO_RS01525 PF14684 Tricorn protease C1 domain LOKO_RS01530 PF02628 Cytochrome oxidase assembly protein LOKO_RS01540 PF00781 Diacylglycerol kinase catalytic domain LOKO_RS01545 PF00550 Phosphopantetheine attachment site LOKO_RS01545 PF00107 Zinc-binding dehydrogenase LOKO_RS01545 PF08240 Alcohol dehydrogenase GroES-like domain LOKO_RS01545 PF14765 Polyketide synthase dehydratase LOKO_RS01545 PF16197 Ketoacyl-synthetase C-terminal extension LOKO_RS01545 PF00109 Beta-ketoacyl synthase, N-terminal domain LOKO_RS01545 PF02801 Beta-ketoacyl synthase, C-terminal domain LOKO_RS01545 PF08659 KR domain LOKO_RS01545 PF00698 Acyl transferase domain LOKO_RS01550 PF05544 Proline racemase LOKO_RS01570 PF05343 M42 glutamyl aminopeptidase LOKO_RS01580 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LOKO_RS01580 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LOKO_RS01585 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LOKO_RS01585 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LOKO_RS01590 PF03480 Bacterial extracellular solute-binding protein, family 7 LOKO_RS01595 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LOKO_RS01595 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LOKO_RS01600 PF01557 Fumarylacetoacetate (FAA) hydrolase family LOKO_RS01605 PF00392 Bacterial regulatory proteins, gntR family LOKO_RS01605 PF07729 FCD domain LOKO_RS01610 PF01168 Alanine racemase, N-terminal domain LOKO_RS01625 PF00210 Ferritin-like domain LOKO_RS01640 PF00881 Nitroreductase family LOKO_RS01655 PF02203 Tar ligand binding domain homologue LOKO_RS01655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LOKO_RS01655 PF00672 HAMP domain LOKO_RS01660 PF00860 Permease family LOKO_RS01690 PF00171 Aldehyde dehydrogenase family LOKO_RS01715 PF01048 Phosphorylase superfamily LOKO_RS01720 PF03992 Antibiotic biosynthesis monooxygenase LOKO_RS01730 PF07804 HipA-like C-terminal domain LOKO_RS01730 PF13657 HipA N-terminal domain LOKO_RS01740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOKO_RS01740 PF03466 LysR substrate binding domain LOKO_RS01745 PF03480 Bacterial extracellular solute-binding protein, family 7 LOKO_RS01755 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LOKO_RS01760 PF01427 D-ala-D-ala dipeptidase LOKO_RS01765 PF02567 Phenazine biosynthesis-like protein LOKO_RS01775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LOKO_RS01775 PF00672 HAMP domain LOKO_RS01775 PF02743 Cache domain LOKO_RS01780 PF05230 MASE2 domain LOKO_RS01780 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS01790 PF07885 Ion channel LOKO_RS01820 PF13538 UvrD-like helicase C-terminal domain LOKO_RS01825 PF13361 UvrD-like helicase C-terminal domain LOKO_RS01825 PF00580 UvrD/REP helicase N-terminal domain LOKO_RS01825 PF12705 PD-(D/E)XK nuclease superfamily LOKO_RS01830 PF17946 RecC C-terminal domain LOKO_RS01840 PF01613 Flavin reductase like domain LOKO_RS01845 PF01425 Amidase LOKO_RS01860 PF13193 AMP-binding enzyme C-terminal domain LOKO_RS01860 PF00501 AMP-binding enzyme LOKO_RS01865 PF03401 Tripartite tricarboxylate transporter family receptor LOKO_RS01880 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LOKO_RS01880 PF01842 ACT domain LOKO_RS01880 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LOKO_RS01890 PF07729 FCD domain LOKO_RS01890 PF00392 Bacterial regulatory proteins, gntR family LOKO_RS01895 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LOKO_RS01905 PF01266 FAD dependent oxidoreductase LOKO_RS01910 PF00464 Serine hydroxymethyltransferase LOKO_RS01920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOKO_RS01920 PF03466 LysR substrate binding domain LOKO_RS01925 PF02633 Creatinine amidohydrolase LOKO_RS01930 PF02028 BCCT, betaine/carnitine/choline family transporter LOKO_RS01935 PF00557 Metallopeptidase family M24 LOKO_RS01935 PF01321 Creatinase/Prolidase N-terminal domain LOKO_RS01945 PF01979 Amidohydrolase family LOKO_RS01950 PF03401 Tripartite tricarboxylate transporter family receptor LOKO_RS01955 PF01970 Tripartite tricarboxylate transporter TctA family LOKO_RS01965 PF01979 Amidohydrolase family LOKO_RS01980 PF01177 Asp/Glu/Hydantoin racemase LOKO_RS01985 PF01979 Amidohydrolase family LOKO_RS01990 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LOKO_RS02000 PF03480 Bacterial extracellular solute-binding protein, family 7 LOKO_RS02030 PF01266 FAD dependent oxidoreductase LOKO_RS02035 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LOKO_RS02040 PF13361 UvrD-like helicase C-terminal domain LOKO_RS02040 PF00580 UvrD/REP helicase N-terminal domain LOKO_RS02045 PF00588 SpoU rRNA Methylase family LOKO_RS02055 PF00156 Phosphoribosyl transferase domain LOKO_RS02070 PF00459 Inositol monophosphatase family LOKO_RS02080 PF00691 OmpA family LOKO_RS02080 PF05736 OprF membrane domain LOKO_RS02085 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LOKO_RS02085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LOKO_RS02085 PF02824 TGS domain LOKO_RS02085 PF03129 Anticodon binding domain LOKO_RS02090 PF00707 Translation initiation factor IF-3, C-terminal domain LOKO_RS02090 PF05198 Translation initiation factor IF-3, N-terminal domain LOKO_RS02095 PF01632 Ribosomal protein L35 LOKO_RS02100 PF00453 Ribosomal protein L20 LOKO_RS02105 PF01409 tRNA synthetases class II core domain (F) LOKO_RS02105 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LOKO_RS02110 PF03483 B3/4 domain LOKO_RS02110 PF03147 Ferredoxin-fold anticodon binding domain LOKO_RS02110 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LOKO_RS02110 PF01588 Putative tRNA binding domain LOKO_RS02110 PF03484 tRNA synthetase B5 domain LOKO_RS02115 PF00216 Bacterial DNA-binding protein LOKO_RS02125 PF00258 Flavodoxin LOKO_RS02135 PF03641 Possible lysine decarboxylase LOKO_RS02135 PF11892 Domain of unknown function (DUF3412) LOKO_RS02135 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases LOKO_RS02140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOKO_RS02140 PF03466 LysR substrate binding domain LOKO_RS02145 PF02347 Glycine cleavage system P-protein LOKO_RS02150 PF01597 Glycine cleavage H-protein LOKO_RS02155 PF01235 Sodium:alanine symporter family LOKO_RS02160 PF08669 Glycine cleavage T-protein C-terminal barrel domain LOKO_RS02160 PF01571 Aminomethyltransferase folate-binding domain LOKO_RS02175 PF01553 Acyltransferase LOKO_RS02180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOKO_RS02180 PF03466 LysR substrate binding domain LOKO_RS02185 PF01144 Coenzyme A transferase LOKO_RS02190 PF01144 Coenzyme A transferase LOKO_RS02200 PF00462 Glutaredoxin LOKO_RS02205 PF00459 Inositol monophosphatase family LOKO_RS02215 PF00072 Response regulator receiver domain LOKO_RS02220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOKO_RS02225 PF12833 Helix-turn-helix domain LOKO_RS02225 PF01965 DJ-1/PfpI family LOKO_RS02230 PF01244 Membrane dipeptidase (Peptidase family M19) LOKO_RS02240 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LOKO_RS02245 PF02665 Nitrate reductase gamma subunit LOKO_RS02245 PF13183 4Fe-4S dicluster domain LOKO_RS02245 PF02754 Cysteine-rich domain LOKO_RS02250 PF01012 Electron transfer flavoprotein domain LOKO_RS02250 PF00766 Electron transfer flavoprotein FAD-binding domain LOKO_RS02260 PF08240 Alcohol dehydrogenase GroES-like domain LOKO_RS02260 PF00107 Zinc-binding dehydrogenase LOKO_RS02265 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LOKO_RS02265 PF10531 SLBB domain LOKO_RS02265 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LOKO_RS02270 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LOKO_RS02270 PF01568 Molydopterin dinucleotide binding domain LOKO_RS02270 PF00384 Molybdopterin oxidoreductase LOKO_RS02270 PF12838 4Fe-4S dicluster domain LOKO_RS02270 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LOKO_RS02280 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LOKO_RS02280 PF00355 Rieske [2Fe-2S] domain LOKO_RS02285 PF00970 Oxidoreductase FAD-binding domain LOKO_RS02285 PF00111 2Fe-2S iron-sulfur cluster binding domain LOKO_RS02285 PF00175 Oxidoreductase NAD-binding domain LOKO_RS02290 PF02028 BCCT, betaine/carnitine/choline family transporter LOKO_RS02295 PF16658 Class II release factor RF3, C-terminal domain LOKO_RS02295 PF00009 Elongation factor Tu GTP binding domain LOKO_RS02300 PF01026 TatD related DNase LOKO_RS02305 PF01571 Aminomethyltransferase folate-binding domain LOKO_RS02310 PF00795 Carbon-nitrogen hydrolase LOKO_RS02315 PF01037 Lrp/AsnC ligand binding domain LOKO_RS02320 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family LOKO_RS02325 PF01321 Creatinase/Prolidase N-terminal domain LOKO_RS02325 PF00557 Metallopeptidase family M24 LOKO_RS02330 PF00392 Bacterial regulatory proteins, gntR family LOKO_RS02330 PF00155 Aminotransferase class I and II LOKO_RS02335 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LOKO_RS02340 PF00857 Isochorismatase family LOKO_RS02345 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LOKO_RS02345 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LOKO_RS02355 PF03956 Lysine exporter LysO LOKO_RS02360 PF01547 Bacterial extracellular solute-binding protein LOKO_RS02365 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS02370 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS02375 PF00128 Alpha amylase, catalytic domain LOKO_RS02380 PF17912 MalK OB fold domain LOKO_RS02380 PF00005 ABC transporter LOKO_RS02385 PF00356 Bacterial regulatory proteins, lacI family LOKO_RS02395 PF00873 AcrB/AcrD/AcrF family LOKO_RS02400 PF00672 HAMP domain LOKO_RS02400 PF00512 His Kinase A (phospho-acceptor) domain LOKO_RS02400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOKO_RS02405 PF00486 Transcriptional regulatory protein, C terminal LOKO_RS02405 PF00072 Response regulator receiver domain LOKO_RS02415 PF02028 BCCT, betaine/carnitine/choline family transporter LOKO_RS02420 PF00355 Rieske [2Fe-2S] domain LOKO_RS02420 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal LOKO_RS02425 PF00033 Cytochrome b/b6/petB LOKO_RS02425 PF00032 Cytochrome b(C-terminal)/b6/petD LOKO_RS02430 PF02167 Cytochrome C1 family LOKO_RS02435 PF00043 Glutathione S-transferase, C-terminal domain LOKO_RS02435 PF02798 Glutathione S-transferase, N-terminal domain LOKO_RS02440 PF04386 Stringent starvation protein B LOKO_RS02445 PF04972 BON domain LOKO_RS02450 PF13580 SIS domain LOKO_RS02455 PF02021 Uncharacterised protein family UPF0102 LOKO_RS02460 PF04348 LppC putative lipoprotein LOKO_RS02465 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LOKO_RS02475 PF01795 MraW methylase family LOKO_RS02480 PF04999 Cell division protein FtsL LOKO_RS02485 PF00905 Penicillin binding protein transpeptidase domain LOKO_RS02485 PF03717 Penicillin-binding Protein dimerisation domain LOKO_RS02490 PF08245 Mur ligase middle domain LOKO_RS02490 PF01225 Mur ligase family, catalytic domain LOKO_RS02490 PF02875 Mur ligase family, glutamate ligase domain LOKO_RS02495 PF02875 Mur ligase family, glutamate ligase domain LOKO_RS02495 PF01225 Mur ligase family, catalytic domain LOKO_RS02495 PF08245 Mur ligase middle domain LOKO_RS02500 PF00953 Glycosyl transferase family 4 LOKO_RS02500 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LOKO_RS02505 PF02875 Mur ligase family, glutamate ligase domain LOKO_RS02505 PF08245 Mur ligase middle domain LOKO_RS02510 PF01098 Cell cycle protein LOKO_RS02515 PF04101 Glycosyltransferase family 28 C-terminal domain LOKO_RS02515 PF03033 Glycosyltransferase family 28 N-terminal domain LOKO_RS02520 PF08245 Mur ligase middle domain LOKO_RS02520 PF01225 Mur ligase family, catalytic domain LOKO_RS02520 PF02875 Mur ligase family, glutamate ligase domain LOKO_RS02525 PF01820 D-ala D-ala ligase N-terminus LOKO_RS02525 PF07478 D-ala D-ala ligase C-terminus LOKO_RS02530 PF08478 POTRA domain, FtsQ-type LOKO_RS02530 PF03799 Cell division protein FtsQ LOKO_RS02535 PF02491 SHS2 domain inserted in FTSA LOKO_RS02540 PF00091 Tubulin/FtsZ family, GTPase domain LOKO_RS02540 PF12327 FtsZ family, C-terminal domain LOKO_RS02545 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LOKO_RS02550 PF06968 Biotin and Thiamin Synthesis associated domain LOKO_RS02550 PF04055 Radical SAM superfamily LOKO_RS02550 PF00202 Aminotransferase class-III LOKO_RS02565 PF12697 Alpha/beta hydrolase family LOKO_RS02565 PF08241 Methyltransferase domain LOKO_RS02570 PF00561 alpha/beta hydrolase fold LOKO_RS02575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LOKO_RS02575 PF02770 Acyl-CoA dehydrogenase, middle domain LOKO_RS02575 PF12806 Acetyl-CoA dehydrogenase C-terminal like LOKO_RS02575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LOKO_RS02580 PF01047 MarR family LOKO_RS02585 PF00106 short chain dehydrogenase LOKO_RS02590 PF13193 AMP-binding enzyme C-terminal domain LOKO_RS02590 PF00501 AMP-binding enzyme LOKO_RS02595 PF17932 Tetracyclin repressor-like, C-terminal domain LOKO_RS02595 PF00440 Bacterial regulatory proteins, tetR family LOKO_RS02600 PF04379 ApaG domain LOKO_RS02610 PF01571 Aminomethyltransferase folate-binding domain LOKO_RS02610 PF08669 Glycine cleavage T-protein C-terminal barrel domain LOKO_RS02610 PF07992 Pyridine nucleotide-disulphide oxidoreductase LOKO_RS02610 PF17806 Sarcosine oxidase A3 domain LOKO_RS02620 PF00551 Formyl transferase LOKO_RS02630 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS02640 PF00583 Acetyltransferase (GNAT) family LOKO_RS02640 PF00696 Amino acid kinase family LOKO_RS02645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOKO_RS02645 PF00512 His Kinase A (phospho-acceptor) domain LOKO_RS02650 PF00303 Thymidylate synthase LOKO_RS02655 PF00186 Dihydrofolate reductase LOKO_RS02660 PF17516 ProQ C-terminal domain LOKO_RS02660 PF04352 ProQ/FINO family LOKO_RS02665 PF13609 Gram-negative porin LOKO_RS02670 PF13545 Crp-like helix-turn-helix domain LOKO_RS02670 PF00027 Cyclic nucleotide-binding domain LOKO_RS02675 PF13426 PAS domain LOKO_RS02675 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS02675 PF05231 MASE1 LOKO_RS02675 PF08447 PAS fold LOKO_RS02675 PF08448 PAS fold LOKO_RS02675 PF00563 EAL domain LOKO_RS02710 PF18073 Rubredoxin metal binding domain LOKO_RS02715 PF00586 AIR synthase related protein, N-terminal domain LOKO_RS02715 PF02769 AIR synthase related protein, C-terminal domain LOKO_RS02720 PF00581 Rhodanese-like domain LOKO_RS02735 PF04222 Protein of unknown function (DUF416) LOKO_RS02745 PF00977 Histidine biosynthesis protein LOKO_RS02750 PF00977 Histidine biosynthesis protein LOKO_RS02755 PF00117 Glutamine amidotransferase class-I LOKO_RS02760 PF00475 Imidazoleglycerol-phosphate dehydratase LOKO_RS02775 PF10576 Iron-sulfur binding domain of endonuclease III LOKO_RS02775 PF00633 Helix-hairpin-helix motif LOKO_RS02775 PF00730 HhH-GPD superfamily base excision DNA repair protein LOKO_RS02775 PF14815 NUDIX domain LOKO_RS02780 PF04362 Bacterial Fe(2+) trafficking LOKO_RS02800 PF05721 Phytanoyl-CoA dioxygenase (PhyH) LOKO_RS02805 PF01557 Fumarylacetoacetate (FAA) hydrolase family LOKO_RS02810 PF17810 Arginine decarboxylase helical bundle domain LOKO_RS02810 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LOKO_RS02810 PF17944 Arginine decarboxylase C-terminal helical extension LOKO_RS02815 PF01636 Phosphotransferase enzyme family LOKO_RS02825 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LOKO_RS02825 PF01367 5'-3' exonuclease, C-terminal SAM fold LOKO_RS02825 PF01612 3'-5' exonuclease LOKO_RS02825 PF00476 DNA polymerase family A LOKO_RS02830 PF08402 TOBE domain LOKO_RS02830 PF00005 ABC transporter LOKO_RS02835 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS02840 PF03144 Elongation factor Tu domain 2 LOKO_RS02840 PF00679 Elongation factor G C-terminus LOKO_RS02840 PF00009 Elongation factor Tu GTP binding domain LOKO_RS02850 PF03401 Tripartite tricarboxylate transporter family receptor LOKO_RS02855 PF03401 Tripartite tricarboxylate transporter family receptor LOKO_RS02865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOKO_RS02865 PF03466 LysR substrate binding domain LOKO_RS02870 PF02515 CoA-transferase family III LOKO_RS02875 PF00682 HMGL-like LOKO_RS02880 PF00392 Bacterial regulatory proteins, gntR family LOKO_RS02880 PF07729 FCD domain LOKO_RS02885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LOKO_RS02895 PF00155 Aminotransferase class I and II LOKO_RS02895 PF00392 Bacterial regulatory proteins, gntR family LOKO_RS02900 PF00871 Acetokinase family LOKO_RS02905 PF01515 Phosphate acetyl/butaryl transferase LOKO_RS02915 PF00356 Bacterial regulatory proteins, lacI family LOKO_RS02915 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LOKO_RS02920 PF01202 Shikimate kinase LOKO_RS02930 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS02935 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS02940 PF01266 FAD dependent oxidoreductase LOKO_RS02945 PF01515 Phosphate acetyl/butaryl transferase LOKO_RS02945 PF07085 DRTGG domain LOKO_RS02950 PF00871 Acetokinase family LOKO_RS02970 PF01964 Radical SAM ThiC family LOKO_RS02970 PF13667 ThiC-associated domain LOKO_RS02975 PF03070 TENA/THI-4/PQQC family LOKO_RS02980 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LOKO_RS02980 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LOKO_RS02980 PF02769 AIR synthase related protein, C-terminal domain LOKO_RS02990 PF00378 Enoyl-CoA hydratase/isomerase LOKO_RS02995 PF04851 Type III restriction enzyme, res subunit LOKO_RS02995 PF00271 Helicase conserved C-terminal domain LOKO_RS03000 PF02616 Segregation and condensation protein ScpA LOKO_RS03005 PF04079 Segregation and condensation complex subunit ScpB LOKO_RS03010 PF01479 S4 domain LOKO_RS03010 PF00849 RNA pseudouridylate synthase LOKO_RS03025 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS03025 PF13426 PAS domain LOKO_RS03025 PF00563 EAL domain LOKO_RS03025 PF08448 PAS fold LOKO_RS03025 PF08447 PAS fold LOKO_RS03025 PF05231 MASE1 LOKO_RS03045 PF01594 AI-2E family transporter LOKO_RS03055 PF08448 PAS fold LOKO_RS03055 PF01339 CheB methylesterase LOKO_RS03055 PF01739 CheR methyltransferase, SAM binding domain LOKO_RS03055 PF03705 CheR methyltransferase, all-alpha domain LOKO_RS03085 PF03275 UDP-galactopyranose mutase LOKO_RS03090 PF13396 Phospholipase_D-nuclease N-terminal LOKO_RS03090 PF13091 PLD-like domain LOKO_RS03105 PF02445 Quinolinate synthetase A protein LOKO_RS03110 PF01435 Peptidase family M48 LOKO_RS03115 PF01206 Sulfurtransferase TusA LOKO_RS03120 PF01594 AI-2E family transporter LOKO_RS03125 PF00578 AhpC/TSA family LOKO_RS03130 PF00701 Dihydrodipicolinate synthetase family LOKO_RS03140 PF00753 Metallo-beta-lactamase superfamily LOKO_RS03145 PF01259 SAICAR synthetase LOKO_RS03150 PF01980 tRNA-methyltransferase O LOKO_RS03150 PF18389 TrmO C-terminal domain LOKO_RS03160 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LOKO_RS03160 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LOKO_RS03165 PF01510 N-acetylmuramoyl-L-alanine amidase LOKO_RS03170 PF17831 Pyruvate dehydrogenase E1 component middle domain LOKO_RS03170 PF00456 Transketolase, thiamine diphosphate binding domain LOKO_RS03175 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LOKO_RS03175 PF00364 Biotin-requiring enzyme LOKO_RS03175 PF02817 e3 binding domain LOKO_RS03180 PF05191 Adenylate kinase, active site lid LOKO_RS03185 PF00814 Glycoprotease family LOKO_RS03190 PF04445 Putative SAM-dependent methyltransferase LOKO_RS03195 PF01553 Acyltransferase LOKO_RS03200 PF13396 Phospholipase_D-nuclease N-terminal LOKO_RS03200 PF13091 PLD-like domain LOKO_RS03210 PF17283 SprT-like zinc ribbon domain LOKO_RS03210 PF10263 SprT-like family LOKO_RS03215 PF00501 AMP-binding enzyme LOKO_RS03215 PF16177 Acetyl-coenzyme A synthetase N-terminus LOKO_RS03215 PF13193 AMP-binding enzyme C-terminal domain LOKO_RS03220 PF02735 Ku70/Ku80 beta-barrel domain LOKO_RS03225 PF02735 Ku70/Ku80 beta-barrel domain LOKO_RS03235 PF04679 ATP dependent DNA ligase C terminal region LOKO_RS03235 PF01068 ATP dependent DNA ligase domain LOKO_RS03235 PF13298 DNA polymerase Ligase (LigD) LOKO_RS03250 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LOKO_RS03250 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain LOKO_RS03255 PF00072 Response regulator receiver domain LOKO_RS03255 PF00196 Bacterial regulatory proteins, luxR family LOKO_RS03260 PF00672 HAMP domain LOKO_RS03260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOKO_RS03260 PF01627 Hpt domain LOKO_RS03260 PF00072 Response regulator receiver domain LOKO_RS03260 PF00512 His Kinase A (phospho-acceptor) domain LOKO_RS03270 PF00474 Sodium:solute symporter family LOKO_RS03290 PF01171 PP-loop family LOKO_RS03295 PF13545 Crp-like helix-turn-helix domain LOKO_RS03295 PF00027 Cyclic nucleotide-binding domain LOKO_RS03300 PF04055 Radical SAM superfamily LOKO_RS03300 PF06969 HemN C-terminal domain LOKO_RS03315 PF00403 Heavy-metal-associated domain LOKO_RS03325 PF12801 4Fe-4S binding domain LOKO_RS03325 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase LOKO_RS03325 PF13746 4Fe-4S dicluster domain LOKO_RS03330 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP LOKO_RS03330 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LOKO_RS03345 PF00115 Cytochrome C and Quinol oxidase polypeptide I LOKO_RS03380 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LOKO_RS03380 PF07992 Pyridine nucleotide-disulphide oxidoreductase LOKO_RS03385 PF00486 Transcriptional regulatory protein, C terminal LOKO_RS03385 PF00072 Response regulator receiver domain LOKO_RS03390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOKO_RS03390 PF00512 His Kinase A (phospho-acceptor) domain LOKO_RS03390 PF07689 KaiB domain LOKO_RS03395 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LOKO_RS03395 PF01411 tRNA synthetases class II (A) LOKO_RS03395 PF02272 DHHA1 domain LOKO_RS03400 PF02631 RecX family LOKO_RS03405 PF00154 recA bacterial DNA recombination protein LOKO_RS03410 PF02464 Competence-damaged protein LOKO_RS03415 PF00303 Thymidylate synthase LOKO_RS03420 PF01790 Prolipoprotein diacylglyceryl transferase LOKO_RS03425 PF00672 HAMP domain LOKO_RS03425 PF01627 Hpt domain LOKO_RS03425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOKO_RS03425 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LOKO_RS03425 PF00512 His Kinase A (phospho-acceptor) domain LOKO_RS03425 PF00072 Response regulator receiver domain LOKO_RS03435 PF01590 GAF domain LOKO_RS03435 PF05524 PEP-utilising enzyme, N-terminal LOKO_RS03435 PF00391 PEP-utilising enzyme, mobile domain LOKO_RS03435 PF02896 PEP-utilising enzyme, TIM barrel domain LOKO_RS03440 PF00293 NUDIX domain LOKO_RS03450 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LOKO_RS03450 PF00056 lactate/malate dehydrogenase, NAD binding domain LOKO_RS03460 PF00873 AcrB/AcrD/AcrF family LOKO_RS03465 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ LOKO_RS03470 PF01494 FAD binding domain LOKO_RS03475 PF00106 short chain dehydrogenase LOKO_RS03485 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LOKO_RS03485 PF00378 Enoyl-CoA hydratase/isomerase LOKO_RS03485 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LOKO_RS03500 PF01551 Peptidase family M23 LOKO_RS03500 PF01476 LysM domain LOKO_RS03505 PF04545 Sigma-70, region 4 LOKO_RS03505 PF04539 Sigma-70 region 3 LOKO_RS03505 PF04542 Sigma-70 region 2 LOKO_RS03505 PF00140 Sigma-70 factor, region 1.2 LOKO_RS03510 PF02321 Outer membrane efflux protein LOKO_RS03515 PF01168 Alanine racemase, N-terminal domain LOKO_RS03515 PF00842 Alanine racemase, C-terminal domain LOKO_RS03520 PF03279 Bacterial lipid A biosynthesis acyltransferase LOKO_RS03525 PF10011 Predicted membrane protein (DUF2254) LOKO_RS03530 PF00005 ABC transporter LOKO_RS03530 PF12848 ABC transporter LOKO_RS03540 PF13426 PAS domain LOKO_RS03540 PF01740 STAS domain LOKO_RS03560 PF13472 GDSL-like Lipase/Acylhydrolase family LOKO_RS03565 PF00005 ABC transporter LOKO_RS03580 PF00464 Serine hydroxymethyltransferase LOKO_RS03590 PF00753 Metallo-beta-lactamase superfamily LOKO_RS03590 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LOKO_RS03590 PF10996 Beta-Casp domain LOKO_RS03605 PF00753 Metallo-beta-lactamase superfamily LOKO_RS03610 PF04273 Putative phosphatase (DUF442) LOKO_RS03610 PF00753 Metallo-beta-lactamase superfamily LOKO_RS03615 PF00916 Sulfate permease family LOKO_RS03615 PF01740 STAS domain LOKO_RS03620 PF04143 Sulphur transport LOKO_RS03630 PF13098 Thioredoxin-like domain LOKO_RS03635 PF08534 Redoxin LOKO_RS03645 PF03477 ATP cone domain LOKO_RS03650 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LOKO_RS03650 PF01872 RibD C-terminal domain LOKO_RS03655 PF00925 GTP cyclohydrolase II LOKO_RS03655 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LOKO_RS03660 PF00885 6,7-dimethyl-8-ribityllumazine synthase LOKO_RS03665 PF01029 NusB family LOKO_RS03670 PF00586 AIR synthase related protein, N-terminal domain LOKO_RS03670 PF02769 AIR synthase related protein, C-terminal domain LOKO_RS03675 PF04608 Phosphatidylglycerophosphatase A LOKO_RS03685 PF00004 ATPase family associated with various cellular activities (AAA) LOKO_RS03685 PF05362 Lon protease (S16) C-terminal proteolytic domain LOKO_RS03685 PF02190 ATP-dependent protease La (LON) substrate-binding domain LOKO_RS03710 PF00920 Dehydratase family LOKO_RS03715 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LOKO_RS03715 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LOKO_RS03720 PF00293 NUDIX domain LOKO_RS03725 PF13419 Haloacid dehalogenase-like hydrolase LOKO_RS03730 PF01479 S4 domain LOKO_RS03735 PF01430 Hsp33 protein LOKO_RS03740 PF01293 Phosphoenolpyruvate carboxykinase LOKO_RS03745 PF01641 SelR domain LOKO_RS03750 PF17674 HHH domain LOKO_RS03750 PF16921 Tex protein YqgF-like domain LOKO_RS03750 PF09371 Tex-like protein N-terminal domain LOKO_RS03750 PF00575 S1 RNA binding domain LOKO_RS03755 PF04262 Glutamate-cysteine ligase LOKO_RS03760 PF02600 Disulfide bond formation protein DsbB LOKO_RS03775 PF04717 Type VI secretion system, phage-baseplate injector LOKO_RS03790 PF05175 Methyltransferase small domain LOKO_RS03790 PF08468 Methyltransferase small domain N-terminal LOKO_RS03805 PF01272 Transcription elongation factor, GreA/GreB, C-term LOKO_RS03805 PF03449 Transcription elongation factor, N-terminal LOKO_RS03815 PF00293 NUDIX domain LOKO_RS03825 PF00149 Calcineurin-like phosphoesterase LOKO_RS03830 PF01507 Phosphoadenosine phosphosulfate reductase family LOKO_RS03835 PF00009 Elongation factor Tu GTP binding domain LOKO_RS03840 PF02417 Chromate transporter LOKO_RS03850 PF04298 Putative neutral zinc metallopeptidase LOKO_RS03855 PF08003 Protein of unknown function (DUF1698) LOKO_RS03860 PF13649 Methyltransferase domain LOKO_RS03865 PF00342 Phosphoglucose isomerase LOKO_RS03870 PF05728 Uncharacterised protein family (UPF0227) LOKO_RS03875 PF00986 DNA gyrase B subunit, carboxyl terminus LOKO_RS03875 PF01751 Toprim domain LOKO_RS03875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOKO_RS03875 PF00204 DNA gyrase B LOKO_RS03880 PF03989 DNA gyrase C-terminal domain, beta-propeller LOKO_RS03880 PF00521 DNA gyrase/topoisomerase IV, subunit A LOKO_RS03910 PF00392 Bacterial regulatory proteins, gntR family LOKO_RS03910 PF07729 FCD domain LOKO_RS03915 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LOKO_RS03915 PF13378 Enolase C-terminal domain-like LOKO_RS03920 PF01970 Tripartite tricarboxylate transporter TctA family LOKO_RS03935 PF00701 Dihydrodipicolinate synthetase family LOKO_RS03940 PF04452 RNA methyltransferase LOKO_RS03945 PF13722 5TM C-terminal transporter carbon starvation CstA LOKO_RS03945 PF02554 Carbon starvation protein CstA LOKO_RS03955 PF02374 Anion-transporting ATPase LOKO_RS03960 PF02698 DUF218 domain LOKO_RS03970 PF00440 Bacterial regulatory proteins, tetR family LOKO_RS03980 PF00633 Helix-hairpin-helix motif LOKO_RS03980 PF00730 HhH-GPD superfamily base excision DNA repair protein LOKO_RS03980 PF10576 Iron-sulfur binding domain of endonuclease III LOKO_RS03985 PF04060 Putative Fe-S cluster LOKO_RS03990 PF17158 Membrane-associated sensor, integral membrane domain LOKO_RS03990 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS03995 PF09334 tRNA synthetases class I (M) LOKO_RS03995 PF01588 Putative tRNA binding domain LOKO_RS04000 PF03707 Bacterial signalling protein N terminal repeat LOKO_RS04000 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS04000 PF00563 EAL domain LOKO_RS04005 PF00717 Peptidase S24-like LOKO_RS04010 PF00817 impB/mucB/samB family LOKO_RS04010 PF11798 IMS family HHH motif LOKO_RS04010 PF13438 Domain of unknown function (DUF4113) LOKO_RS04010 PF11799 impB/mucB/samB family C-terminal domain LOKO_RS04015 PF00561 alpha/beta hydrolase fold LOKO_RS04015 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus LOKO_RS04030 PF12255 Insecticide toxin TcdB middle/C-terminal region LOKO_RS04030 PF12256 Insecticide toxin TcdB middle/N-terminal region LOKO_RS04030 PF03534 Salmonella virulence plasmid 65kDa B protein LOKO_RS04035 PF00171 Aldehyde dehydrogenase family LOKO_RS04045 PF00106 short chain dehydrogenase LOKO_RS04050 PF03707 Bacterial signalling protein N terminal repeat LOKO_RS04050 PF00563 EAL domain LOKO_RS04050 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS04060 PF16485 Protealysin propeptide LOKO_RS04060 PF01447 Thermolysin metallopeptidase, catalytic domain LOKO_RS04060 PF02868 Thermolysin metallopeptidase, alpha-helical domain LOKO_RS04070 PF00682 HMGL-like LOKO_RS04070 PF08502 LeuA allosteric (dimerisation) domain LOKO_RS04075 PF04055 Radical SAM superfamily LOKO_RS04080 PF08207 Elongation factor P (EF-P) KOW-like domain LOKO_RS04080 PF09285 Elongation factor P, C-terminal LOKO_RS04080 PF01132 Elongation factor P (EF-P) OB domain LOKO_RS04085 PF00152 tRNA synthetases class II (D, K and N) LOKO_RS04090 PF02666 Phosphatidylserine decarboxylase LOKO_RS04095 PF00581 Rhodanese-like domain LOKO_RS04100 PF03193 RsgA GTPase LOKO_RS04105 PF00929 Exonuclease LOKO_RS04110 PF08331 Domain of unknown function (DUF1730) LOKO_RS04115 PF03853 YjeF-related protein N-terminus LOKO_RS04115 PF01256 Carbohydrate kinase LOKO_RS04120 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LOKO_RS04125 PF11741 AMIN domain LOKO_RS04125 PF01520 N-acetylmuramoyl-L-alanine amidase LOKO_RS04130 PF08676 MutL C terminal dimerisation domain LOKO_RS04130 PF01119 DNA mismatch repair protein, C-terminal domain LOKO_RS04140 PF17209 Hfq protein LOKO_RS04145 PF16360 GTP-binding GTPase Middle Region LOKO_RS04145 PF13167 GTP-binding GTPase N-terminal LOKO_RS04145 PF01926 50S ribosome-binding GTPase LOKO_RS04150 PF01145 SPFH domain / Band 7 family LOKO_RS04150 PF12221 Bacterial membrane protein N terminal LOKO_RS04155 PF01145 SPFH domain / Band 7 family LOKO_RS04160 PF13393 Histidyl-tRNA synthetase LOKO_RS04165 PF00709 Adenylosuccinate synthetase LOKO_RS04175 PF13607 Succinyl-CoA ligase like flavodoxin domain LOKO_RS04175 PF13380 CoA binding domain LOKO_RS04175 PF00583 Acetyltransferase (GNAT) family LOKO_RS04180 PF04461 Protein of unknown function (DUF520) LOKO_RS04185 PF00011 Hsp20/alpha crystallin family LOKO_RS04190 PF04304 Protein of unknown function (DUF454) LOKO_RS04195 PF01433 Peptidase family M1 domain LOKO_RS04195 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LOKO_RS04195 PF11940 Domain of unknown function (DUF3458) Ig-like fold LOKO_RS04205 PF00571 CBS domain LOKO_RS04215 PF07556 Protein of unknown function (DUF1538) LOKO_RS04220 PF04011 LemA family LOKO_RS04225 PF01435 Peptidase family M48 LOKO_RS04235 PF00313 'Cold-shock' DNA-binding domain LOKO_RS04245 PF01464 Transglycosylase SLT domain LOKO_RS04260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOKO_RS04260 PF00183 Hsp90 protein LOKO_RS04265 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LOKO_RS04265 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LOKO_RS04265 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LOKO_RS04270 PF02233 NAD(P) transhydrogenase beta subunit LOKO_RS04275 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LOKO_RS04275 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LOKO_RS04285 PF03992 Antibiotic biosynthesis monooxygenase LOKO_RS04300 PF00561 alpha/beta hydrolase fold LOKO_RS04305 PF01734 Patatin-like phospholipase LOKO_RS04315 PF05175 Methyltransferase small domain LOKO_RS04320 PF01264 Chorismate synthase LOKO_RS04335 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus LOKO_RS04335 PF00561 alpha/beta hydrolase fold LOKO_RS04340 PF00795 Carbon-nitrogen hydrolase LOKO_RS04345 PF00571 CBS domain LOKO_RS04345 PF03471 Transporter associated domain LOKO_RS04350 PF02130 Uncharacterized protein family UPF0054 LOKO_RS04355 PF02562 PhoH-like protein LOKO_RS04360 PF04055 Radical SAM superfamily LOKO_RS04360 PF00919 Uncharacterized protein family UPF0004 LOKO_RS04360 PF01938 TRAM domain LOKO_RS04375 PF08239 Bacterial SH3 domain LOKO_RS04380 PF05724 Thiopurine S-methyltransferase (TPMT) LOKO_RS04390 PF13673 Acetyltransferase (GNAT) domain LOKO_RS04395 PF12857 TOBE-like domain LOKO_RS04395 PF00005 ABC transporter LOKO_RS04400 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS04405 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS04415 PF00834 Ribulose-phosphate 3 epimerase family LOKO_RS04420 PF01541 GIY-YIG catalytic domain LOKO_RS04425 PF13419 Haloacid dehalogenase-like hydrolase LOKO_RS04430 PF04715 Anthranilate synthase component I, N terminal region LOKO_RS04430 PF00425 chorismate binding enzyme LOKO_RS04435 PF01297 Zinc-uptake complex component A periplasmic LOKO_RS04440 PF00117 Glutamine amidotransferase class-I LOKO_RS04445 PF00591 Glycosyl transferase family, a/b domain LOKO_RS04445 PF02885 Glycosyl transferase family, helical bundle domain LOKO_RS04455 PF00218 Indole-3-glycerol phosphate synthase LOKO_RS04465 PF11146 Protein of unknown function (DUF2905) LOKO_RS04470 PF13183 4Fe-4S dicluster domain LOKO_RS04470 PF01565 FAD binding domain LOKO_RS04470 PF02913 FAD linked oxidases, C-terminal domain LOKO_RS04475 PF02403 Seryl-tRNA synthetase N-terminal domain LOKO_RS04475 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LOKO_RS04485 PF01594 AI-2E family transporter LOKO_RS04490 PF00085 Thioredoxin LOKO_RS04500 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS04510 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LOKO_RS04515 PF18073 Rubredoxin metal binding domain LOKO_RS04525 PF00216 Bacterial DNA-binding protein LOKO_RS04530 PF03937 Flavinator of succinate dehydrogenase LOKO_RS04540 PF02910 Fumarate reductase flavoprotein C-term LOKO_RS04540 PF00890 FAD binding domain LOKO_RS04565 PF01066 CDP-alcohol phosphatidyltransferase LOKO_RS04570 PF01541 GIY-YIG catalytic domain LOKO_RS04570 PF02151 UvrB/uvrC motif LOKO_RS04570 PF08459 UvrC Helix-hairpin-helix N-terminal LOKO_RS04575 PF00196 Bacterial regulatory proteins, luxR family LOKO_RS04575 PF00072 Response regulator receiver domain LOKO_RS04585 PF02559 CarD-like/TRCF domain LOKO_RS04585 PF00270 DEAD/DEAH box helicase LOKO_RS04585 PF00271 Helicase conserved C-terminal domain LOKO_RS04585 PF03461 TRCF domain LOKO_RS04585 PF17757 UvrB interaction domain LOKO_RS04590 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LOKO_RS04590 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LOKO_RS04595 PF11973 NQRA C-terminal domain LOKO_RS04595 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) LOKO_RS04600 PF03116 NQR2, RnfD, RnfE family LOKO_RS04605 PF04205 FMN-binding domain LOKO_RS04610 PF02508 Rnf-Nqr subunit, membrane protein LOKO_RS04615 PF02508 Rnf-Nqr subunit, membrane protein LOKO_RS04620 PF00111 2Fe-2S iron-sulfur cluster binding domain LOKO_RS04620 PF00970 Oxidoreductase FAD-binding domain LOKO_RS04620 PF00175 Oxidoreductase NAD-binding domain LOKO_RS04635 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LOKO_RS04635 PF07992 Pyridine nucleotide-disulphide oxidoreductase LOKO_RS04640 PF04343 Protein of unknown function, DUF488 LOKO_RS04655 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS04675 PF00133 tRNA synthetases class I (I, L, M and V) LOKO_RS04675 PF13603 Leucyl-tRNA synthetase, Domain 2 LOKO_RS04675 PF08264 Anticodon-binding domain of tRNA LOKO_RS04680 PF02719 Polysaccharide biosynthesis protein LOKO_RS04685 PF02563 Polysaccharide biosynthesis/export protein LOKO_RS04685 PF10531 SLBB domain LOKO_RS04685 PF18412 Outer-membrane lipoprotein Wza C-terminal domain LOKO_RS04690 PF01451 Low molecular weight phosphotyrosine protein phosphatase LOKO_RS04695 PF02706 Chain length determinant protein LOKO_RS04695 PF13807 G-rich domain on putative tyrosine kinase LOKO_RS04695 PF13614 AAA domain LOKO_RS04700 PF01370 NAD dependent epimerase/dehydratase family LOKO_RS04705 PF02875 Mur ligase family, glutamate ligase domain LOKO_RS04705 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LOKO_RS04705 PF08245 Mur ligase middle domain LOKO_RS04710 PF01979 Amidohydrolase family LOKO_RS04730 PF12705 PD-(D/E)XK nuclease superfamily LOKO_RS04730 PF13361 UvrD-like helicase C-terminal domain LOKO_RS04730 PF00580 UvrD/REP helicase N-terminal domain LOKO_RS04740 PF02779 Transketolase, pyrimidine binding domain LOKO_RS04740 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LOKO_RS04740 PF02780 Transketolase, C-terminal domain LOKO_RS04745 PF00348 Polyprenyl synthetase LOKO_RS04750 PF02609 Exonuclease VII small subunit LOKO_RS04755 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LOKO_RS04755 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LOKO_RS04770 PF00378 Enoyl-CoA hydratase/isomerase LOKO_RS04775 PF09339 IclR helix-turn-helix domain LOKO_RS04775 PF01614 Bacterial transcriptional regulator LOKO_RS04790 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LOKO_RS04800 PF03480 Bacterial extracellular solute-binding protein, family 7 LOKO_RS04810 PF01494 FAD binding domain LOKO_RS04820 PF04209 homogentisate 1,2-dioxygenase LOKO_RS04830 PF14497 Glutathione S-transferase, C-terminal domain LOKO_RS04830 PF02798 Glutathione S-transferase, N-terminal domain LOKO_RS04835 PF07690 Major Facilitator Superfamily LOKO_RS04860 PF01494 FAD binding domain LOKO_RS04870 PF01266 FAD dependent oxidoreductase LOKO_RS04875 PF00171 Aldehyde dehydrogenase family LOKO_RS04880 PF03466 LysR substrate binding domain LOKO_RS04880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOKO_RS04890 PF03480 Bacterial extracellular solute-binding protein, family 7 LOKO_RS04895 PF00067 Cytochrome P450 LOKO_RS04905 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LOKO_RS04905 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LOKO_RS04915 PF00005 ABC transporter LOKO_RS04915 PF12399 Branched-chain amino acid ATP-binding cassette transporter LOKO_RS04920 PF00005 ABC transporter LOKO_RS04925 PF12833 Helix-turn-helix domain LOKO_RS04935 PF02653 Branched-chain amino acid transport system / permease component LOKO_RS04945 PF09370 Phosphoenolpyruvate hydrolase-like LOKO_RS04955 PF00005 ABC transporter LOKO_RS04960 PF00005 ABC transporter LOKO_RS04960 PF12399 Branched-chain amino acid ATP-binding cassette transporter LOKO_RS04975 PF02653 Branched-chain amino acid transport system / permease component LOKO_RS04980 PF09370 Phosphoenolpyruvate hydrolase-like LOKO_RS04995 PF09370 Phosphoenolpyruvate hydrolase-like LOKO_RS04995 PF00158 Sigma-54 interaction domain LOKO_RS04995 PF02954 Bacterial regulatory protein, Fis family LOKO_RS05000 PF03652 Holliday junction resolvase LOKO_RS05005 PF02622 Uncharacterized ACR, COG1678 LOKO_RS05015 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LOKO_RS05015 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LOKO_RS05025 PF13509 S1 domain LOKO_RS05025 PF17783 CvfB-like winged helix domain LOKO_RS05030 PF00171 Aldehyde dehydrogenase family LOKO_RS05055 PF02397 Bacterial sugar transferase LOKO_RS05060 PF04932 O-Antigen ligase LOKO_RS05085 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS05085 PF00072 Response regulator receiver domain LOKO_RS05095 PF17763 Glutaminase/Asparaginase C-terminal domain LOKO_RS05095 PF00710 Asparaginase, N-terminal LOKO_RS05110 PF02687 FtsX-like permease family LOKO_RS05110 PF00005 ABC transporter LOKO_RS05110 PF12704 MacB-like periplasmic core domain LOKO_RS05115 PF00892 EamA-like transporter family LOKO_RS05120 PF07690 Major Facilitator Superfamily LOKO_RS05130 PF00271 Helicase conserved C-terminal domain LOKO_RS05130 PF00270 DEAD/DEAH box helicase LOKO_RS05145 PF02470 MlaD protein LOKO_RS05150 PF04403 Paraquat-inducible protein A LOKO_RS05155 PF01699 Sodium/calcium exchanger protein LOKO_RS05160 PF01654 Cytochrome bd terminal oxidase subunit I LOKO_RS05165 PF02322 Cytochrome bd terminal oxidase subunit II LOKO_RS05170 PF00005 ABC transporter LOKO_RS05170 PF00664 ABC transporter transmembrane region LOKO_RS05175 PF00005 ABC transporter LOKO_RS05175 PF00664 ABC transporter transmembrane region LOKO_RS05180 PF00962 Adenosine/AMP deaminase LOKO_RS05185 PF00034 Cytochrome c LOKO_RS05185 PF03150 Di-haem cytochrome c peroxidase LOKO_RS05190 PF00174 Oxidoreductase molybdopterin binding domain LOKO_RS05195 PF01794 Ferric reductase like transmembrane component LOKO_RS05200 PF00860 Permease family LOKO_RS05205 PF03707 Bacterial signalling protein N terminal repeat LOKO_RS05205 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS05205 PF00563 EAL domain LOKO_RS05210 PF02556 Preprotein translocase subunit SecB LOKO_RS05215 PF00581 Rhodanese-like domain LOKO_RS05220 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LOKO_RS05220 PF01676 Metalloenzyme superfamily LOKO_RS05225 PF01551 Peptidase family M23 LOKO_RS05230 PF03572 Peptidase family S41 LOKO_RS05230 PF13180 PDZ domain LOKO_RS05235 PF01494 FAD binding domain LOKO_RS05240 PF01494 FAD binding domain LOKO_RS05245 PF05195 Aminopeptidase P, N-terminal domain LOKO_RS05245 PF00557 Metallopeptidase family M24 LOKO_RS05250 PF03695 Uncharacterised protein family (UPF0149) LOKO_RS05255 PF05164 Cell division protein ZapA LOKO_RS05265 PF01812 5-formyltetrahydrofolate cyclo-ligase family LOKO_RS05270 PF00585 C-terminal regulatory domain of Threonine dehydratase LOKO_RS05270 PF00291 Pyridoxal-phosphate dependent enzyme LOKO_RS05275 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LOKO_RS05280 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LOKO_RS05285 PF00294 pfkB family carbohydrate kinase LOKO_RS05285 PF01467 Cytidylyltransferase-like LOKO_RS05300 PF13439 Glycosyltransferase Family 4 LOKO_RS05300 PF00534 Glycosyl transferases group 1 LOKO_RS05305 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LOKO_RS05310 PF00535 Glycosyl transferase family 2 LOKO_RS05315 PF00884 Sulfatase LOKO_RS05320 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LOKO_RS05325 PF01370 NAD dependent epimerase/dehydratase family LOKO_RS05330 PF02091 Glycyl-tRNA synthetase alpha subunit LOKO_RS05335 PF05746 DALR anticodon binding domain LOKO_RS05335 PF02092 Glycyl-tRNA synthetase beta subunit LOKO_RS05345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOKO_RS05345 PF01751 Toprim domain LOKO_RS05345 PF00986 DNA gyrase B subunit, carboxyl terminus LOKO_RS05345 PF00204 DNA gyrase B LOKO_RS05345 PF18053 DNA gyrase B subunit insert domain LOKO_RS05350 PF02463 RecF/RecN/SMC N terminal domain LOKO_RS05355 PF02767 DNA polymerase III beta subunit, central domain LOKO_RS05355 PF02768 DNA polymerase III beta subunit, C-terminal domain LOKO_RS05355 PF00712 DNA polymerase III beta subunit, N-terminal domain LOKO_RS05360 PF00308 Bacterial dnaA protein LOKO_RS05360 PF08299 Bacterial dnaA protein helix-turn-helix LOKO_RS05360 PF11638 DnaA N-terminal domain LOKO_RS05365 PF00468 Ribosomal protein L34 LOKO_RS05370 PF00825 Ribonuclease P LOKO_RS05375 PF02096 60Kd inner membrane protein LOKO_RS05375 PF14849 YidC periplasmic domain LOKO_RS05380 PF12631 MnmE helical domain LOKO_RS05380 PF10396 GTP-binding protein TrmE N-terminus LOKO_RS05380 PF01926 50S ribosome-binding GTPase LOKO_RS05385 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LOKO_RS05390 PF13488 Glycine zipper LOKO_RS05390 PF00691 OmpA family LOKO_RS05395 PF06969 HemN C-terminal domain LOKO_RS05395 PF04055 Radical SAM superfamily LOKO_RS05400 PF01725 Ham1 family LOKO_RS05405 PF00196 Bacterial regulatory proteins, luxR family LOKO_RS05415 PF00202 Aminotransferase class-III LOKO_RS05420 PF03653 Uncharacterised protein family (UPF0093) LOKO_RS05425 PF00654 Voltage gated chloride channel LOKO_RS05430 PF01118 Semialdehyde dehydrogenase, NAD binding domain LOKO_RS05430 PF02774 Semialdehyde dehydrogenase, dimerisation domain LOKO_RS05435 PF01521 Iron-sulphur cluster biosynthesis LOKO_RS05440 PF00497 Bacterial extracellular solute-binding proteins, family 3 LOKO_RS05445 PF03480 Bacterial extracellular solute-binding protein, family 7 LOKO_RS05455 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LOKO_RS05465 PF01266 FAD dependent oxidoreductase LOKO_RS05475 PF01979 Amidohydrolase family LOKO_RS05485 PF01048 Phosphorylase superfamily LOKO_RS05490 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LOKO_RS05490 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LOKO_RS05515 PF05697 Bacterial trigger factor protein (TF) LOKO_RS05515 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LOKO_RS05515 PF05698 Bacterial trigger factor protein (TF) C-terminus LOKO_RS05530 PF00501 AMP-binding enzyme LOKO_RS05530 PF13193 AMP-binding enzyme C-terminal domain LOKO_RS05535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LOKO_RS05535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LOKO_RS05535 PF02770 Acyl-CoA dehydrogenase, middle domain LOKO_RS05540 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain LOKO_RS05540 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LOKO_RS05540 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LOKO_RS05545 PF00108 Thiolase, N-terminal domain LOKO_RS05545 PF02803 Thiolase, C-terminal domain LOKO_RS05555 PF02405 Permease MlaE LOKO_RS05560 PF00005 ABC transporter LOKO_RS05565 PF02470 MlaD protein LOKO_RS05565 PF03886 ABC-type transport auxiliary lipoprotein component LOKO_RS05575 PF00392 Bacterial regulatory proteins, gntR family LOKO_RS05575 PF07729 FCD domain LOKO_RS05580 PF00085 Thioredoxin LOKO_RS05585 PF03466 LysR substrate binding domain LOKO_RS05585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOKO_RS05590 PF01507 Phosphoadenosine phosphosulfate reductase family LOKO_RS05595 PF04715 Anthranilate synthase component I, N terminal region LOKO_RS05595 PF00425 chorismate binding enzyme LOKO_RS05600 PF02580 D-Tyr-tRNA(Tyr) deacylase LOKO_RS05605 PF08544 GHMP kinases C terminal LOKO_RS05605 PF00288 GHMP kinases N terminal domain LOKO_RS05610 PF03550 Outer membrane lipoprotein LolB LOKO_RS05620 PF01488 Shikimate / quinate 5-dehydrogenase LOKO_RS05620 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LOKO_RS05620 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LOKO_RS05625 PF03462 PCRF domain LOKO_RS05625 PF00472 RF-1 domain LOKO_RS05630 PF01037 Lrp/AsnC ligand binding domain LOKO_RS05635 PF00899 ThiF family LOKO_RS05640 PF03466 LysR substrate binding domain LOKO_RS05640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOKO_RS05645 PF01266 FAD dependent oxidoreductase LOKO_RS05650 PF00120 Glutamine synthetase, catalytic domain LOKO_RS05655 PF13416 Bacterial extracellular solute-binding protein LOKO_RS05660 PF08402 TOBE domain LOKO_RS05660 PF00005 ABC transporter LOKO_RS05665 PF01523 Putative modulator of DNA gyrase LOKO_RS05670 PF00381 PTS HPr component phosphorylation site LOKO_RS05675 PF03668 P-loop ATPase protein family LOKO_RS05680 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LOKO_RS05685 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LOKO_RS05690 PF04552 Sigma-54, DNA binding domain LOKO_RS05690 PF04963 Sigma-54 factor, core binding domain LOKO_RS05690 PF00309 Sigma-54 factor, Activator interacting domain (AID) LOKO_RS05695 PF00005 ABC transporter LOKO_RS05695 PF12399 Branched-chain amino acid ATP-binding cassette transporter LOKO_RS05715 PF00571 CBS domain LOKO_RS05715 PF01380 SIS domain LOKO_RS05720 PF01699 Sodium/calcium exchanger protein LOKO_RS05725 PF00005 ABC transporter LOKO_RS05730 PF02405 Permease MlaE LOKO_RS05735 PF02470 MlaD protein LOKO_RS05740 PF00141 Peroxidase LOKO_RS05755 PF13180 PDZ domain LOKO_RS05760 PF01784 NIF3 (NGG1p interacting factor 3) LOKO_RS05770 PF03969 AFG1-like ATPase LOKO_RS05775 PF00572 Ribosomal protein L13 LOKO_RS05780 PF00380 Ribosomal protein S9/S16 LOKO_RS05790 PF00561 alpha/beta hydrolase fold LOKO_RS05815 PF01043 SecA preprotein cross-linking domain LOKO_RS05815 PF07517 SecA DEAD-like domain LOKO_RS05815 PF02810 SEC-C motif LOKO_RS05815 PF07516 SecA Wing and Scaffold domain LOKO_RS05820 PF01960 ArgJ family LOKO_RS05825 PF05494 MlaC protein LOKO_RS05835 PF01722 BolA-like protein LOKO_RS05840 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LOKO_RS05845 PF01634 ATP phosphoribosyltransferase LOKO_RS05850 PF00815 Histidinol dehydrogenase LOKO_RS05855 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LOKO_RS05860 PF03966 Trm112p-like protein LOKO_RS05865 PF02348 Cytidylyltransferase LOKO_RS05870 PF01451 Low molecular weight phosphotyrosine protein phosphatase LOKO_RS05875 PF01565 FAD binding domain LOKO_RS05875 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LOKO_RS05880 PF12111 Polyribonucleotide phosphorylase C terminal LOKO_RS05880 PF10150 Ribonuclease E/G family LOKO_RS05880 PF00575 S1 RNA binding domain LOKO_RS05890 PF00849 RNA pseudouridylate synthase LOKO_RS05890 PF01479 S4 domain LOKO_RS05895 PF13419 Haloacid dehalogenase-like hydrolase LOKO_RS05900 PF01343 Peptidase family S49 LOKO_RS05900 PF06965 Na+/H+ antiporter 1 LOKO_RS05905 PF02545 Maf-like protein LOKO_RS05910 PF02620 Large ribosomal RNA subunit accumulation protein YceD LOKO_RS05915 PF01783 Ribosomal L32p protein family LOKO_RS05920 PF02504 Fatty acid synthesis protein LOKO_RS05925 PF00698 Acyl transferase domain LOKO_RS05930 PF00106 short chain dehydrogenase LOKO_RS05935 PF00550 Phosphopantetheine attachment site LOKO_RS05940 PF02801 Beta-ketoacyl synthase, C-terminal domain LOKO_RS05940 PF00109 Beta-ketoacyl synthase, N-terminal domain LOKO_RS05945 PF01063 Amino-transferase class IV LOKO_RS05960 PF00873 AcrB/AcrD/AcrF family LOKO_RS05965 PF00155 Aminotransferase class I and II LOKO_RS05970 PF04055 Radical SAM superfamily LOKO_RS05970 PF06968 Biotin and Thiamin Synthesis associated domain LOKO_RS05975 PF00156 Phosphoribosyl transferase domain LOKO_RS05980 PF01636 Phosphotransferase enzyme family LOKO_RS05990 PF01227 GTP cyclohydrolase I LOKO_RS05995 PF02152 Dihydroneopterin aldolase LOKO_RS06005 PF00171 Aldehyde dehydrogenase family LOKO_RS06010 PF02142 MGS-like domain LOKO_RS06010 PF01808 AICARFT/IMPCHase bienzyme LOKO_RS06015 PF02954 Bacterial regulatory protein, Fis family LOKO_RS06020 PF01207 Dihydrouridine synthase (Dus) LOKO_RS06030 PF05199 GMC oxidoreductase LOKO_RS06030 PF00732 GMC oxidoreductase LOKO_RS06035 PF00171 Aldehyde dehydrogenase family LOKO_RS06040 PF13977 BetI-type transcriptional repressor, C-terminal LOKO_RS06040 PF00440 Bacterial regulatory proteins, tetR family LOKO_RS06065 PF00581 Rhodanese-like domain LOKO_RS06090 PF17804 Tail specific protease N-terminal domain LOKO_RS06090 PF11818 C-terminal domain of tail specific protease (DUF3340) LOKO_RS06090 PF03572 Peptidase family S41 LOKO_RS06090 PF00595 PDZ domain LOKO_RS06095 PF02127 Aminopeptidase I zinc metalloprotease (M18) LOKO_RS06105 PF01926 50S ribosome-binding GTPase LOKO_RS06105 PF06071 Protein of unknown function (DUF933) LOKO_RS06110 PF01195 Peptidyl-tRNA hydrolase LOKO_RS06115 PF01386 Ribosomal L25p family LOKO_RS06115 PF14693 Ribosomal protein TL5, C-terminal domain LOKO_RS06135 PF02785 Biotin carboxylase C-terminal domain LOKO_RS06135 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LOKO_RS06135 PF00289 Biotin carboxylase, N-terminal domain LOKO_RS06140 PF00364 Biotin-requiring enzyme LOKO_RS06145 PF02683 Cytochrome C biogenesis protein transmembrane region LOKO_RS06145 PF11412 Disulphide bond corrector protein DsbC LOKO_RS06150 PF00719 Inorganic pyrophosphatase LOKO_RS06160 PF00365 Phosphofructokinase LOKO_RS06165 PF02875 Mur ligase family, glutamate ligase domain LOKO_RS06165 PF08245 Mur ligase middle domain LOKO_RS06165 PF01225 Mur ligase family, catalytic domain LOKO_RS06170 PF02441 Flavoprotein LOKO_RS06175 PF01810 LysE type translocator LOKO_RS06180 PF09335 SNARE associated Golgi protein LOKO_RS06195 PF00171 Aldehyde dehydrogenase family LOKO_RS06200 PF01467 Cytidylyltransferase-like LOKO_RS06210 PF02590 Predicted SPOUT methyltransferase LOKO_RS06215 PF03717 Penicillin-binding Protein dimerisation domain LOKO_RS06215 PF00905 Penicillin binding protein transpeptidase domain LOKO_RS06220 PF01098 Cell cycle protein LOKO_RS06225 PF13406 Transglycosylase SLT domain LOKO_RS06230 PF03330 Lytic transglycolase LOKO_RS06230 PF05036 Sporulation related domain LOKO_RS06235 PF07943 Penicillin-binding protein 5, C-terminal domain LOKO_RS06235 PF00768 D-alanyl-D-alanine carboxypeptidase LOKO_RS06245 PF03099 Biotin/lipoate A/B protein ligase family LOKO_RS06250 PF04055 Radical SAM superfamily LOKO_RS06255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOKO_RS06255 PF03466 LysR substrate binding domain LOKO_RS06260 PF02785 Biotin carboxylase C-terminal domain LOKO_RS06260 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LOKO_RS06260 PF00289 Biotin carboxylase, N-terminal domain LOKO_RS06265 PF11339 Protein of unknown function (DUF3141) LOKO_RS06270 PF01396 Topoisomerase DNA binding C4 zinc finger LOKO_RS06270 PF08272 Topoisomerase I zinc-ribbon-like LOKO_RS06270 PF01131 DNA topoisomerase LOKO_RS06270 PF01751 Toprim domain LOKO_RS06295 PF00005 ABC transporter LOKO_RS06295 PF12848 ABC transporter LOKO_RS06300 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LOKO_RS06300 PF00437 Type II/IV secretion system protein LOKO_RS06315 PF03734 L,D-transpeptidase catalytic domain LOKO_RS06315 PF17969 L,D-transpeptidase C-terminal domain LOKO_RS06320 PF00271 Helicase conserved C-terminal domain LOKO_RS06320 PF02559 CarD-like/TRCF domain LOKO_RS06320 PF00270 DEAD/DEAH box helicase LOKO_RS06320 PF17757 UvrB interaction domain LOKO_RS06320 PF03461 TRCF domain LOKO_RS06325 PF00330 Aconitase family (aconitate hydratase) LOKO_RS06330 PF00694 Aconitase C-terminal domain LOKO_RS06335 PF00180 Isocitrate/isopropylmalate dehydrogenase LOKO_RS06340 PF01118 Semialdehyde dehydrogenase, NAD binding domain LOKO_RS06340 PF02774 Semialdehyde dehydrogenase, dimerisation domain LOKO_RS06350 PF01416 tRNA pseudouridine synthase LOKO_RS06365 PF02581 Thiamine monophosphate synthase LOKO_RS06370 PF00795 Carbon-nitrogen hydrolase LOKO_RS06375 PF04371 Porphyromonas-type peptidyl-arginine deiminase LOKO_RS06380 PF12704 MacB-like periplasmic core domain LOKO_RS06380 PF02687 FtsX-like permease family LOKO_RS06385 PF00005 ABC transporter LOKO_RS06400 PF01618 MotA/TolQ/ExbB proton channel family LOKO_RS06405 PF02472 Biopolymer transport protein ExbD/TolR LOKO_RS06410 PF00664 ABC transporter transmembrane region LOKO_RS06410 PF00005 ABC transporter LOKO_RS06415 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LOKO_RS06420 PF01208 Uroporphyrinogen decarboxylase (URO-D) LOKO_RS06430 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LOKO_RS06435 PF00291 Pyridoxal-phosphate dependent enzyme LOKO_RS06440 PF00290 Tryptophan synthase alpha chain LOKO_RS06445 PF00290 Tryptophan synthase alpha chain LOKO_RS06450 PF01039 Carboxyl transferase domain LOKO_RS06450 PF17848 Acetyl-coA carboxylase zinc finger domain LOKO_RS06455 PF08245 Mur ligase middle domain LOKO_RS06455 PF02875 Mur ligase family, glutamate ligase domain LOKO_RS06470 PF00156 Phosphoribosyl transferase domain LOKO_RS06475 PF01053 Cys/Met metabolism PLP-dependent enzyme LOKO_RS06480 PF01292 Prokaryotic cytochrome b561 LOKO_RS06485 PF04264 YceI-like domain LOKO_RS06490 PF01554 MatE LOKO_RS06510 PF00155 Aminotransferase class I and II LOKO_RS06515 PF01329 Pterin 4 alpha carbinolamine dehydratase LOKO_RS06525 PF00004 ATPase family associated with various cellular activities (AAA) LOKO_RS06525 PF05362 Lon protease (S16) C-terminal proteolytic domain LOKO_RS06525 PF02190 ATP-dependent protease La (LON) substrate-binding domain LOKO_RS06535 PF00350 Dynamin family LOKO_RS06550 PF07728 AAA domain (dynein-related subfamily) LOKO_RS06550 PF08406 CbbQ/NirQ/NorQ C-terminal LOKO_RS06550 PF12556 Cobaltochelatase CobS subunit N terminal LOKO_RS06560 PF00005 ABC transporter LOKO_RS06580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOKO_RS06585 PF03631 Virulence factor BrkB LOKO_RS06590 PF00672 HAMP domain LOKO_RS06590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOKO_RS06590 PF00512 His Kinase A (phospho-acceptor) domain LOKO_RS06590 PF13426 PAS domain LOKO_RS06595 PF00072 Response regulator receiver domain LOKO_RS06595 PF00486 Transcriptional regulatory protein, C terminal LOKO_RS06610 PF00535 Glycosyl transferase family 2 LOKO_RS06630 PF00472 RF-1 domain LOKO_RS06645 PF10609 NUBPL iron-transfer P-loop NTPase LOKO_RS06650 PF00692 dUTPase LOKO_RS06655 PF00551 Formyl transferase LOKO_RS06660 PF02769 AIR synthase related protein, C-terminal domain LOKO_RS06660 PF00586 AIR synthase related protein, N-terminal domain LOKO_RS06665 PF01594 AI-2E family transporter LOKO_RS06670 PF00308 Bacterial dnaA protein LOKO_RS06690 PF08546 Ketopantoate reductase PanE/ApbA C terminal LOKO_RS06690 PF02558 Ketopantoate reductase PanE/ApbA LOKO_RS06695 PF01751 Toprim domain LOKO_RS06695 PF01131 DNA topoisomerase LOKO_RS06700 PF03109 ABC1 family LOKO_RS06705 PF07516 SecA Wing and Scaffold domain LOKO_RS06705 PF07517 SecA DEAD-like domain LOKO_RS06705 PF02810 SEC-C motif LOKO_RS06705 PF01043 SecA preprotein cross-linking domain LOKO_RS06710 PF07690 Major Facilitator Superfamily LOKO_RS06720 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LOKO_RS06730 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS06730 PF07694 5TMR of 5TMR-LYT LOKO_RS06745 PF03707 Bacterial signalling protein N terminal repeat LOKO_RS06745 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS06745 PF00563 EAL domain LOKO_RS06755 PF01464 Transglycosylase SLT domain LOKO_RS06760 PF04073 Aminoacyl-tRNA editing domain LOKO_RS06760 PF03129 Anticodon binding domain LOKO_RS06760 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LOKO_RS06775 PF01510 N-acetylmuramoyl-L-alanine amidase LOKO_RS06795 PF17862 AAA+ lid domain LOKO_RS06795 PF01434 Peptidase family M41 LOKO_RS06795 PF00004 ATPase family associated with various cellular activities (AAA) LOKO_RS06800 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LOKO_RS06800 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LOKO_RS06805 PF00892 EamA-like transporter family LOKO_RS06810 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS06810 PF00563 EAL domain LOKO_RS06810 PF03707 Bacterial signalling protein N terminal repeat LOKO_RS06815 PF01527 Transposase LOKO_RS06820 PF00665 Integrase core domain LOKO_RS06840 PF12852 Cupin LOKO_RS06840 PF12833 Helix-turn-helix domain LOKO_RS06855 PF01370 NAD dependent epimerase/dehydratase family LOKO_RS06865 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LOKO_RS06865 PF00753 Metallo-beta-lactamase superfamily LOKO_RS06865 PF10996 Beta-Casp domain LOKO_RS06880 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LOKO_RS06880 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LOKO_RS06880 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LOKO_RS06885 PF02350 UDP-N-acetylglucosamine 2-epimerase LOKO_RS06890 PF00574 Clp protease LOKO_RS06895 PF06689 ClpX C4-type zinc finger LOKO_RS06895 PF07724 AAA domain (Cdc48 subfamily) LOKO_RS06895 PF10431 C-terminal, D2-small domain, of ClpB protein LOKO_RS06900 PF02190 ATP-dependent protease La (LON) substrate-binding domain LOKO_RS06900 PF05362 Lon protease (S16) C-terminal proteolytic domain LOKO_RS06900 PF00004 ATPase family associated with various cellular activities (AAA) LOKO_RS06905 PF00216 Bacterial DNA-binding protein LOKO_RS06915 PF00270 DEAD/DEAH box helicase LOKO_RS06915 PF00271 Helicase conserved C-terminal domain LOKO_RS06915 PF17191 RecG wedge domain LOKO_RS06920 PF00149 Calcineurin-like phosphoesterase LOKO_RS06925 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LOKO_RS06930 PF00749 tRNA synthetases class I (E and Q), catalytic domain LOKO_RS06930 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LOKO_RS06935 PF01406 tRNA synthetases class I (C) catalytic domain LOKO_RS06935 PF09190 DALR domain LOKO_RS06945 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LOKO_RS06950 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS06955 PF00005 ABC transporter LOKO_RS06960 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS06965 PF00676 Dehydrogenase E1 component LOKO_RS06970 PF02779 Transketolase, pyrimidine binding domain LOKO_RS06970 PF02780 Transketolase, C-terminal domain LOKO_RS06975 PF02817 e3 binding domain LOKO_RS06975 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LOKO_RS06975 PF00364 Biotin-requiring enzyme LOKO_RS06985 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LOKO_RS07000 PF03466 LysR substrate binding domain LOKO_RS07000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOKO_RS07010 PF03746 LamB/YcsF family LOKO_RS07015 PF02682 Carboxyltransferase domain, subdomain C and D LOKO_RS07020 PF02626 Carboxyltransferase domain, subdomain A and B LOKO_RS07025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LOKO_RS07025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LOKO_RS07025 PF02770 Acyl-CoA dehydrogenase, middle domain LOKO_RS07030 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LOKO_RS07030 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LOKO_RS07030 PF00378 Enoyl-CoA hydratase/isomerase LOKO_RS07035 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LOKO_RS07035 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LOKO_RS07040 PF01554 MatE LOKO_RS07045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LOKO_RS07045 PF02770 Acyl-CoA dehydrogenase, middle domain LOKO_RS07045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LOKO_RS07050 PF02515 CoA-transferase family III LOKO_RS07060 PF03618 Kinase/pyrophosphorylase LOKO_RS07070 PF00873 AcrB/AcrD/AcrF family LOKO_RS07075 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LOKO_RS07095 PF00136 DNA polymerase family B LOKO_RS07095 PF03104 DNA polymerase family B, exonuclease domain LOKO_RS07100 PF01699 Sodium/calcium exchanger protein LOKO_RS07105 PF00563 EAL domain LOKO_RS07105 PF03707 Bacterial signalling protein N terminal repeat LOKO_RS07105 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS07110 PF04239 Protein of unknown function (DUF421) LOKO_RS07115 PF01588 Putative tRNA binding domain LOKO_RS07115 PF09334 tRNA synthetases class I (M) LOKO_RS07120 PF00171 Aldehyde dehydrogenase family LOKO_RS07125 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LOKO_RS07135 PF03480 Bacterial extracellular solute-binding protein, family 7 LOKO_RS07160 PF00497 Bacterial extracellular solute-binding proteins, family 3 LOKO_RS07165 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS07170 PF00005 ABC transporter LOKO_RS07175 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS07180 PF08402 TOBE domain LOKO_RS07180 PF00005 ABC transporter LOKO_RS07190 PF08240 Alcohol dehydrogenase GroES-like domain LOKO_RS07190 PF00107 Zinc-binding dehydrogenase LOKO_RS07200 PF01266 FAD dependent oxidoreductase LOKO_RS07200 PF00355 Rieske [2Fe-2S] domain LOKO_RS07205 PF05974 Domain of unknown function (DUF892) LOKO_RS07220 PF08671 Anti-repressor SinI LOKO_RS07220 PF01381 Helix-turn-helix LOKO_RS07260 PF00176 SNF2 family N-terminal domain LOKO_RS07260 PF00271 Helicase conserved C-terminal domain LOKO_RS07275 PF00149 Calcineurin-like phosphoesterase LOKO_RS07295 PF17946 RecC C-terminal domain LOKO_RS07300 PF00580 UvrD/REP helicase N-terminal domain LOKO_RS07300 PF12705 PD-(D/E)XK nuclease superfamily LOKO_RS07300 PF13361 UvrD-like helicase C-terminal domain LOKO_RS07305 PF00929 Exonuclease LOKO_RS07315 PF00512 His Kinase A (phospho-acceptor) domain LOKO_RS07315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOKO_RS07315 PF16736 Single Cache-like LOKO_RS07315 PF00989 PAS fold LOKO_RS07320 PF02743 Cache domain LOKO_RS07320 PF00672 HAMP domain LOKO_RS07320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LOKO_RS07335 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS07345 PF05726 Pirin C-terminal cupin domain LOKO_RS07345 PF02678 Pirin LOKO_RS07355 PF00221 Aromatic amino acid lyase LOKO_RS07360 PF00501 AMP-binding enzyme LOKO_RS07360 PF13193 AMP-binding enzyme C-terminal domain LOKO_RS07365 PF00989 PAS fold LOKO_RS07370 PF12833 Helix-turn-helix domain LOKO_RS07370 PF02311 AraC-like ligand binding domain LOKO_RS07375 PF00797 N-acetyltransferase LOKO_RS07380 PF02627 Carboxymuconolactone decarboxylase family LOKO_RS07410 PF03358 NADPH-dependent FMN reductase LOKO_RS07420 PF06983 3-demethylubiquinone-9 3-methyltransferase LOKO_RS07435 PF02805 Metal binding domain of Ada LOKO_RS07435 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LOKO_RS07435 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LOKO_RS07435 PF12833 Helix-turn-helix domain LOKO_RS07460 PF07690 Major Facilitator Superfamily LOKO_RS07470 PF00196 Bacterial regulatory proteins, luxR family LOKO_RS07470 PF00072 Response regulator receiver domain LOKO_RS07475 PF01261 Xylose isomerase-like TIM barrel LOKO_RS07490 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS07490 PF07694 5TMR of 5TMR-LYT LOKO_RS07495 PF00392 Bacterial regulatory proteins, gntR family LOKO_RS07495 PF00155 Aminotransferase class I and II LOKO_RS07515 PF00730 HhH-GPD superfamily base excision DNA repair protein LOKO_RS07515 PF06029 AlkA N-terminal domain LOKO_RS07520 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LOKO_RS07520 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LOKO_RS07525 PF01047 MarR family LOKO_RS07535 PF03795 YCII-related domain LOKO_RS07540 PF08281 Sigma-70, region 4 LOKO_RS07540 PF04542 Sigma-70 region 2 LOKO_RS07545 PF07237 Protein of unknown function (DUF1428) LOKO_RS07550 PF01144 Coenzyme A transferase LOKO_RS07555 PF02577 Bifunctional nuclease LOKO_RS07565 PF14437 MafB19-like deaminase LOKO_RS07570 PF01464 Transglycosylase SLT domain LOKO_RS07570 PF00497 Bacterial extracellular solute-binding proteins, family 3 LOKO_RS07575 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LOKO_RS07575 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LOKO_RS07575 PF02769 AIR synthase related protein, C-terminal domain LOKO_RS07580 PF00893 Small Multidrug Resistance protein LOKO_RS07585 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS07585 PF13185 GAF domain LOKO_RS07590 PF00970 Oxidoreductase FAD-binding domain LOKO_RS07590 PF00175 Oxidoreductase NAD-binding domain LOKO_RS07590 PF00042 Globin LOKO_RS07595 PF00881 Nitroreductase family LOKO_RS07605 PF07992 Pyridine nucleotide-disulphide oxidoreductase LOKO_RS07605 PF00403 Heavy-metal-associated domain LOKO_RS07605 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LOKO_RS07610 PF00939 Sodium:sulfate symporter transmembrane region LOKO_RS07615 PF07992 Pyridine nucleotide-disulphide oxidoreductase LOKO_RS07615 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LOKO_RS07620 PF02817 e3 binding domain LOKO_RS07620 PF00364 Biotin-requiring enzyme LOKO_RS07620 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LOKO_RS07625 PF17831 Pyruvate dehydrogenase E1 component middle domain LOKO_RS07625 PF00456 Transketolase, thiamine diphosphate binding domain LOKO_RS07630 PF03949 Malic enzyme, NAD binding domain LOKO_RS07630 PF00390 Malic enzyme, N-terminal domain LOKO_RS07630 PF01515 Phosphate acetyl/butaryl transferase LOKO_RS07650 PF01979 Amidohydrolase family LOKO_RS07660 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LOKO_RS07660 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LOKO_RS07665 PF01799 [2Fe-2S] binding domain LOKO_RS07665 PF00111 2Fe-2S iron-sulfur cluster binding domain LOKO_RS07670 PF13654 AAA domain LOKO_RS07670 PF05362 Lon protease (S16) C-terminal proteolytic domain LOKO_RS07685 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS07690 PF02810 SEC-C motif LOKO_RS07695 PF00221 Aromatic amino acid lyase LOKO_RS07700 PF01175 Urocanase Rossmann-like domain LOKO_RS07700 PF17391 Urocanase N-terminal domain LOKO_RS07700 PF17392 Urocanase C-terminal domain LOKO_RS07705 PF00491 Arginase family LOKO_RS07710 PF01979 Amidohydrolase family LOKO_RS07715 PF07670 Nucleoside recognition LOKO_RS07720 PF07702 UTRA domain LOKO_RS07720 PF00392 Bacterial regulatory proteins, gntR family LOKO_RS07725 PF00849 RNA pseudouridylate synthase LOKO_RS07725 PF01479 S4 domain LOKO_RS07745 PF00534 Glycosyl transferases group 1 LOKO_RS07745 PF13439 Glycosyltransferase Family 4 LOKO_RS07760 PF00114 Pilin (bacterial filament) LOKO_RS07760 PF07963 Prokaryotic N-terminal methylation motif LOKO_RS07765 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LOKO_RS07765 PF00437 Type II/IV secretion system protein LOKO_RS07770 PF00482 Type II secretion system (T2SS), protein F LOKO_RS07775 PF01478 Type IV leader peptidase family LOKO_RS07775 PF06750 Bacterial Peptidase A24 N-terminal domain LOKO_RS07780 PF01121 Dephospho-CoA kinase LOKO_RS07785 PF03884 DNA gyrase inhibitor YacG LOKO_RS07795 PF01136 Peptidase family U32 LOKO_RS07795 PF16325 Peptidase family U32 C-terminal domain LOKO_RS07800 PF06508 Queuosine biosynthesis protein QueC LOKO_RS07815 PF03692 Putative zinc- or iron-chelating domain LOKO_RS07825 PF17757 UvrB interaction domain LOKO_RS07825 PF02151 UvrB/uvrC motif LOKO_RS07825 PF12344 Ultra-violet resistance protein B LOKO_RS07825 PF00271 Helicase conserved C-terminal domain LOKO_RS07825 PF04851 Type III restriction enzyme, res subunit LOKO_RS07830 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LOKO_RS07830 PF06827 Zinc finger found in FPG and IleRS LOKO_RS07830 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LOKO_RS07835 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LOKO_RS07835 PF00205 Thiamine pyrophosphate enzyme, central domain LOKO_RS07835 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LOKO_RS07845 PF13091 PLD-like domain LOKO_RS07845 PF13396 Phospholipase_D-nuclease N-terminal LOKO_RS07850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOKO_RS07850 PF03466 LysR substrate binding domain LOKO_RS07855 PF01467 Cytidylyltransferase-like LOKO_RS07855 PF00293 NUDIX domain LOKO_RS07860 PF03631 Virulence factor BrkB LOKO_RS07865 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LOKO_RS07865 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LOKO_RS07870 PF00708 Acylphosphatase LOKO_RS07875 PF01156 Inosine-uridine preferring nucleoside hydrolase LOKO_RS07880 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LOKO_RS07880 PF00294 pfkB family carbohydrate kinase LOKO_RS07885 PF00330 Aconitase family (aconitate hydratase) LOKO_RS07890 PF00166 Chaperonin 10 Kd subunit LOKO_RS07895 PF00118 TCP-1/cpn60 chaperonin family LOKO_RS07900 PF00588 SpoU rRNA Methylase family LOKO_RS07905 PF03819 MazG nucleotide pyrophosphohydrolase domain LOKO_RS07910 PF04607 Region found in RelA / SpoT proteins LOKO_RS07910 PF13291 ACT domain LOKO_RS07910 PF02824 TGS domain LOKO_RS07920 PF00575 S1 RNA binding domain LOKO_RS07925 PF02224 Cytidylate kinase LOKO_RS07930 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LOKO_RS07935 PF00800 Prephenate dehydratase LOKO_RS07935 PF01817 Chorismate mutase type II LOKO_RS07935 PF01842 ACT domain LOKO_RS07940 PF00266 Aminotransferase class-V LOKO_RS07945 PF00521 DNA gyrase/topoisomerase IV, subunit A LOKO_RS07945 PF03989 DNA gyrase C-terminal domain, beta-propeller LOKO_RS07950 PF00521 DNA gyrase/topoisomerase IV, subunit A LOKO_RS07950 PF03989 DNA gyrase C-terminal domain, beta-propeller LOKO_RS07960 PF04381 Putative exonuclease, RdgC LOKO_RS07970 PF01545 Cation efflux family LOKO_RS07970 PF16916 Dimerisation domain of Zinc Transporter LOKO_RS08005 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS08010 PF12911 N-terminal TM domain of oligopeptide transport permease C LOKO_RS08010 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS08015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LOKO_RS08015 PF00005 ABC transporter LOKO_RS08020 PF02913 FAD linked oxidases, C-terminal domain LOKO_RS08020 PF01565 FAD binding domain LOKO_RS08025 PF00892 EamA-like transporter family LOKO_RS08030 PF00155 Aminotransferase class I and II LOKO_RS08035 PF00158 Sigma-54 interaction domain LOKO_RS08035 PF02954 Bacterial regulatory protein, Fis family LOKO_RS08035 PF13188 PAS domain LOKO_RS08040 PF00491 Arginase family LOKO_RS08045 PF07670 Nucleoside recognition LOKO_RS08050 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LOKO_RS08050 PF00205 Thiamine pyrophosphate enzyme, central domain LOKO_RS08050 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LOKO_RS08055 PF00171 Aldehyde dehydrogenase family LOKO_RS08065 PF03480 Bacterial extracellular solute-binding protein, family 7 LOKO_RS08070 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LOKO_RS08075 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LOKO_RS08075 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LOKO_RS08090 PF00043 Glutathione S-transferase, C-terminal domain LOKO_RS08090 PF02798 Glutathione S-transferase, N-terminal domain LOKO_RS08100 PF02653 Branched-chain amino acid transport system / permease component LOKO_RS08115 PF00072 Response regulator receiver domain LOKO_RS08115 PF02954 Bacterial regulatory protein, Fis family LOKO_RS08115 PF00158 Sigma-54 interaction domain LOKO_RS08120 PF00512 His Kinase A (phospho-acceptor) domain LOKO_RS08120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOKO_RS08125 PF03006 Haemolysin-III related LOKO_RS08130 PF00925 GTP cyclohydrolase II LOKO_RS08135 PF01208 Uroporphyrinogen decarboxylase (URO-D) LOKO_RS08145 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LOKO_RS08150 PF01578 Cytochrome C assembly protein LOKO_RS08150 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LOKO_RS08155 PF08534 Redoxin LOKO_RS08160 PF03918 Cytochrome C biogenesis protein LOKO_RS08175 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LOKO_RS08180 PF03264 NapC/NirT cytochrome c family, N-terminal region LOKO_RS08185 PF00127 Copper binding proteins, plastocyanin/azurin family LOKO_RS08210 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LOKO_RS08215 PF05573 NosL LOKO_RS08220 PF12679 ABC-2 family transporter protein LOKO_RS08225 PF00005 ABC transporter LOKO_RS08230 PF05048 Periplasmic copper-binding protein (NosD) LOKO_RS08235 PF18764 Nitrous oxide reductase propeller repeat LOKO_RS08235 PF18793 Nitrous oxide reductase propeller repeat 2 LOKO_RS08235 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LOKO_RS08240 PF12801 4Fe-4S binding domain LOKO_RS08240 PF04205 FMN-binding domain LOKO_RS08250 PF02082 Transcriptional regulator LOKO_RS08255 PF04304 Protein of unknown function (DUF454) LOKO_RS08265 PF06969 HemN C-terminal domain LOKO_RS08265 PF04055 Radical SAM superfamily LOKO_RS08270 PF01814 Hemerythrin HHE cation binding domain LOKO_RS08270 PF04405 Domain of Unknown function (DUF542) LOKO_RS08275 PF00158 Sigma-54 interaction domain LOKO_RS08275 PF02954 Bacterial regulatory protein, Fis family LOKO_RS08280 PF02036 SCP-2 sterol transfer family LOKO_RS08300 PF07662 Na+ dependent nucleoside transporter C-terminus LOKO_RS08300 PF07670 Nucleoside recognition LOKO_RS08300 PF01773 Na+ dependent nucleoside transporter N-terminus LOKO_RS08305 PF01791 DeoC/LacD family aldolase LOKO_RS08310 PF00591 Glycosyl transferase family, a/b domain LOKO_RS08310 PF02885 Glycosyl transferase family, helical bundle domain LOKO_RS08310 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LOKO_RS08315 PF01676 Metalloenzyme superfamily LOKO_RS08320 PF01048 Phosphorylase superfamily LOKO_RS08335 PF04055 Radical SAM superfamily LOKO_RS08350 PF01136 Peptidase family U32 LOKO_RS08355 PF01136 Peptidase family U32 LOKO_RS08360 PF00042 Globin LOKO_RS08360 PF00970 Oxidoreductase FAD-binding domain LOKO_RS08360 PF00175 Oxidoreductase NAD-binding domain LOKO_RS08370 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LOKO_RS08375 PF17805 AsnC-like ligand binding domain LOKO_RS08380 PF17805 AsnC-like ligand binding domain LOKO_RS08385 PF13404 AsnC-type helix-turn-helix domain LOKO_RS08385 PF17805 AsnC-like ligand binding domain LOKO_RS08390 PF17805 AsnC-like ligand binding domain LOKO_RS08395 PF04055 Radical SAM superfamily LOKO_RS08395 PF13186 Iron-sulfur cluster-binding domain LOKO_RS08400 PF10414 Sirohaem synthase dimerisation region LOKO_RS08400 PF14824 Sirohaem biosynthesis protein central LOKO_RS08400 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LOKO_RS08420 PF02627 Carboxymuconolactone decarboxylase family LOKO_RS08425 PF00034 Cytochrome c LOKO_RS08430 PF00115 Cytochrome C and Quinol oxidase polypeptide I LOKO_RS08435 PF08406 CbbQ/NirQ/NorQ C-terminal LOKO_RS08435 PF07728 AAA domain (dynein-related subfamily) LOKO_RS08440 PF00092 von Willebrand factor type A domain LOKO_RS08455 PF00510 Cytochrome c oxidase subunit III LOKO_RS08470 PF07690 Major Facilitator Superfamily LOKO_RS08475 PF07690 Major Facilitator Superfamily LOKO_RS08485 PF07690 Major Facilitator Superfamily LOKO_RS08490 PF00072 Response regulator receiver domain LOKO_RS08490 PF00196 Bacterial regulatory proteins, luxR family LOKO_RS08495 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LOKO_RS08495 PF07730 Histidine kinase LOKO_RS08495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOKO_RS08495 PF00672 HAMP domain LOKO_RS08500 PF07690 Major Facilitator Superfamily LOKO_RS08505 PF01568 Molydopterin dinucleotide binding domain LOKO_RS08505 PF00384 Molybdopterin oxidoreductase LOKO_RS08505 PF14710 Respiratory nitrate reductase alpha N-terminal LOKO_RS08510 PF13247 4Fe-4S dicluster domain LOKO_RS08510 PF14711 Respiratory nitrate reductase beta C-terminal LOKO_RS08515 PF02613 Nitrate reductase delta subunit LOKO_RS08520 PF02665 Nitrate reductase gamma subunit LOKO_RS08525 PF09312 SurA N-terminal domain LOKO_RS08525 PF00639 PPIC-type PPIASE domain LOKO_RS08530 PF00994 Probable molybdopterin binding domain LOKO_RS08535 PF00994 Probable molybdopterin binding domain LOKO_RS08535 PF03453 MoeA N-terminal region (domain I and II) LOKO_RS08535 PF03454 MoeA C-terminal region (domain IV) LOKO_RS08545 PF08859 DGC domain LOKO_RS08550 PF06463 Molybdenum Cofactor Synthesis C LOKO_RS08550 PF04055 Radical SAM superfamily LOKO_RS08555 PF00326 Prolyl oligopeptidase family LOKO_RS08555 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LOKO_RS08560 PF02909 Tetracyclin repressor-like, C-terminal domain LOKO_RS08560 PF00440 Bacterial regulatory proteins, tetR family LOKO_RS08565 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LOKO_RS08575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LOKO_RS08580 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS08585 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS08585 PF12911 N-terminal TM domain of oligopeptide transport permease C LOKO_RS08590 PF00005 ABC transporter LOKO_RS08590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LOKO_RS08595 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LOKO_RS08595 PF00005 ABC transporter LOKO_RS08605 PF00593 TonB dependent receptor LOKO_RS08605 PF07715 TonB-dependent Receptor Plug Domain LOKO_RS08610 PF00005 ABC transporter LOKO_RS08650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LOKO_RS08650 PF07497 Rho termination factor, RNA-binding domain LOKO_RS08650 PF07498 Rho termination factor, N-terminal domain LOKO_RS08670 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LOKO_RS08670 PF04324 BFD-like [2Fe-2S] binding domain LOKO_RS08670 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LOKO_RS08670 PF18267 Rubredoxin NAD+ reductase C-terminal domain LOKO_RS08670 PF13806 Rieske-like [2Fe-2S] domain LOKO_RS08670 PF07992 Pyridine nucleotide-disulphide oxidoreductase LOKO_RS08675 PF07992 Pyridine nucleotide-disulphide oxidoreductase LOKO_RS08675 PF04324 BFD-like [2Fe-2S] binding domain LOKO_RS08675 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LOKO_RS08675 PF18267 Rubredoxin NAD+ reductase C-terminal domain LOKO_RS08675 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LOKO_RS08685 PF03861 ANTAR domain LOKO_RS08685 PF08376 Nitrate and nitrite sensing LOKO_RS08690 PF01568 Molydopterin dinucleotide binding domain LOKO_RS08690 PF00384 Molybdopterin oxidoreductase LOKO_RS08690 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LOKO_RS08690 PF04324 BFD-like [2Fe-2S] binding domain LOKO_RS08695 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LOKO_RS08695 PF14824 Sirohaem biosynthesis protein central LOKO_RS08695 PF10414 Sirohaem synthase dimerisation region LOKO_RS08705 PF02525 Flavodoxin-like fold LOKO_RS08710 PF03301 Tryptophan 2,3-dioxygenase LOKO_RS08715 PF00266 Aminotransferase class-V LOKO_RS08720 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS08720 PF00563 EAL domain LOKO_RS08720 PF08448 PAS fold LOKO_RS08725 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS08725 PF03707 Bacterial signalling protein N terminal repeat LOKO_RS08725 PF00563 EAL domain LOKO_RS08730 PF02954 Bacterial regulatory protein, Fis family LOKO_RS08730 PF00072 Response regulator receiver domain LOKO_RS08730 PF00158 Sigma-54 interaction domain LOKO_RS08735 PF00072 Response regulator receiver domain LOKO_RS08735 PF13188 PAS domain LOKO_RS08735 PF08448 PAS fold LOKO_RS08735 PF00512 His Kinase A (phospho-acceptor) domain LOKO_RS08735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOKO_RS08740 PF00072 Response regulator receiver domain LOKO_RS08740 PF00158 Sigma-54 interaction domain LOKO_RS08740 PF02954 Bacterial regulatory protein, Fis family LOKO_RS08745 PF08534 Redoxin LOKO_RS08755 PF00850 Histone deacetylase domain LOKO_RS08760 PF03466 LysR substrate binding domain LOKO_RS08760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOKO_RS08785 PF08534 Redoxin LOKO_RS08790 PF01970 Tripartite tricarboxylate transporter TctA family LOKO_RS08800 PF01557 Fumarylacetoacetate (FAA) hydrolase family LOKO_RS08805 PF00392 Bacterial regulatory proteins, gntR family LOKO_RS08805 PF07729 FCD domain LOKO_RS08810 PF13091 PLD-like domain LOKO_RS08810 PF13396 Phospholipase_D-nuclease N-terminal LOKO_RS08815 PF07690 Major Facilitator Superfamily LOKO_RS08825 PF03734 L,D-transpeptidase catalytic domain LOKO_RS08825 PF01471 Putative peptidoglycan binding domain LOKO_RS08830 PF00005 ABC transporter LOKO_RS08835 PF01551 Peptidase family M23 LOKO_RS08835 PF01476 LysM domain LOKO_RS08835 PF08525 Opacity-associated protein A N-terminal motif LOKO_RS08840 PF05726 Pirin C-terminal cupin domain LOKO_RS08840 PF02678 Pirin LOKO_RS08845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOKO_RS08845 PF03466 LysR substrate binding domain LOKO_RS08850 PF13409 Glutathione S-transferase, N-terminal domain LOKO_RS08855 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LOKO_RS08860 PF03880 DbpA RNA binding domain LOKO_RS08860 PF00270 DEAD/DEAH box helicase LOKO_RS08860 PF00271 Helicase conserved C-terminal domain LOKO_RS08870 PF00171 Aldehyde dehydrogenase family LOKO_RS08875 PF02028 BCCT, betaine/carnitine/choline family transporter LOKO_RS08880 PF01894 Uncharacterised protein family UPF0047 LOKO_RS08890 PF13847 Methyltransferase domain LOKO_RS08895 PF04542 Sigma-70 region 2 LOKO_RS08895 PF08281 Sigma-70, region 4 LOKO_RS08900 PF13490 Putative zinc-finger LOKO_RS08905 PF08241 Methyltransferase domain LOKO_RS08910 PF13649 Methyltransferase domain LOKO_RS08915 PF00107 Zinc-binding dehydrogenase LOKO_RS08915 PF08240 Alcohol dehydrogenase GroES-like domain LOKO_RS08920 PF00171 Aldehyde dehydrogenase family LOKO_RS08925 PF00072 Response regulator receiver domain LOKO_RS08925 PF00196 Bacterial regulatory proteins, luxR family LOKO_RS08930 PF07995 Glucose / Sorbosone dehydrogenase LOKO_RS08935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOKO_RS08935 PF00512 His Kinase A (phospho-acceptor) domain LOKO_RS08945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOKO_RS08945 PF00512 His Kinase A (phospho-acceptor) domain LOKO_RS08945 PF01627 Hpt domain LOKO_RS08945 PF17149 Periplasmic sensor domain found in signal transduction proteins LOKO_RS08945 PF00072 Response regulator receiver domain LOKO_RS08945 PF00672 HAMP domain LOKO_RS08955 PF00224 Pyruvate kinase, barrel domain LOKO_RS08955 PF02887 Pyruvate kinase, alpha/beta domain LOKO_RS08960 PF05161 MOFRL family LOKO_RS08960 PF13660 Domain of unknown function (DUF4147) LOKO_RS08965 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LOKO_RS08965 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LOKO_RS08970 PF01261 Xylose isomerase-like TIM barrel LOKO_RS08975 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LOKO_RS08975 PF00205 Thiamine pyrophosphate enzyme, central domain LOKO_RS08975 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LOKO_RS08980 PF04115 Ureidoglycolate lyase LOKO_RS08985 PF07883 Cupin domain LOKO_RS08985 PF05899 Protein of unknown function (DUF861) LOKO_RS08995 PF01177 Asp/Glu/Hydantoin racemase LOKO_RS09000 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LOKO_RS09015 PF00576 HIUase/Transthyretin family LOKO_RS09020 PF09349 OHCU decarboxylase LOKO_RS09020 PF01014 Uricase LOKO_RS09025 PF00860 Permease family LOKO_RS09040 PF13417 Glutathione S-transferase, N-terminal domain LOKO_RS09045 PF02652 L-lactate permease LOKO_RS09060 PF00005 ABC transporter LOKO_RS09060 PF08402 TOBE domain LOKO_RS09065 PF13416 Bacterial extracellular solute-binding protein LOKO_RS09070 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LOKO_RS09070 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LOKO_RS09080 PF00152 tRNA synthetases class II (D, K and N) LOKO_RS09080 PF02938 GAD domain LOKO_RS09080 PF01336 OB-fold nucleic acid binding domain LOKO_RS09085 PF02075 Crossover junction endodeoxyribonuclease RuvC LOKO_RS09090 PF01330 RuvA N terminal domain LOKO_RS09090 PF07499 RuvA, C-terminal domain LOKO_RS09095 PF05496 Holliday junction DNA helicase RuvB P-loop domain LOKO_RS09095 PF17864 RuvB AAA lid domain LOKO_RS09095 PF05491 RuvB C-terminal winged helix domain LOKO_RS09100 PF03061 Thioesterase superfamily LOKO_RS09105 PF01618 MotA/TolQ/ExbB proton channel family LOKO_RS09110 PF02472 Biopolymer transport protein ExbD/TolR LOKO_RS09120 PF04052 TolB amino-terminal domain LOKO_RS09120 PF07676 WD40-like Beta Propeller Repeat LOKO_RS09125 PF00691 OmpA family LOKO_RS09135 PF00106 short chain dehydrogenase LOKO_RS09140 PF13419 Haloacid dehalogenase-like hydrolase LOKO_RS09150 PF00483 Nucleotidyl transferase LOKO_RS09155 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LOKO_RS09155 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LOKO_RS09155 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LOKO_RS09165 PF04851 Type III restriction enzyme, res subunit LOKO_RS09165 PF02151 UvrB/uvrC motif LOKO_RS09165 PF12344 Ultra-violet resistance protein B LOKO_RS09165 PF17757 UvrB interaction domain LOKO_RS09165 PF00271 Helicase conserved C-terminal domain LOKO_RS09170 PF01425 Amidase LOKO_RS09175 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS09175 PF03707 Bacterial signalling protein N terminal repeat LOKO_RS09175 PF00563 EAL domain LOKO_RS09180 PF07694 5TMR of 5TMR-LYT LOKO_RS09180 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS09200 PF00460 Flagella basal body rod protein LOKO_RS09205 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LOKO_RS09205 PF00460 Flagella basal body rod protein LOKO_RS09210 PF03963 Flagellar hook capping protein - N-terminal region LOKO_RS09210 PF13860 FlgD Ig-like domain LOKO_RS09210 PF13861 FlgD Tudor-like domain LOKO_RS09215 PF07559 Flagellar basal body protein FlaE LOKO_RS09215 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LOKO_RS09215 PF00460 Flagella basal body rod protein LOKO_RS09220 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LOKO_RS09220 PF00460 Flagella basal body rod protein LOKO_RS09225 PF00460 Flagella basal body rod protein LOKO_RS09225 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LOKO_RS09230 PF02107 Flagellar L-ring protein LOKO_RS09235 PF02119 Flagellar P-ring protein LOKO_RS09240 PF10135 Rod binding protein LOKO_RS09240 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LOKO_RS09245 PF00460 Flagella basal body rod protein LOKO_RS09245 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LOKO_RS09255 PF13847 Methyltransferase domain LOKO_RS09260 PF02567 Phenazine biosynthesis-like protein LOKO_RS09280 PF00043 Glutathione S-transferase, C-terminal domain LOKO_RS09280 PF02798 Glutathione S-transferase, N-terminal domain LOKO_RS09295 PF17243 POTRA domain TamA domain 1 LOKO_RS09295 PF07244 Surface antigen variable number repeat LOKO_RS09295 PF01103 Surface antigen LOKO_RS09300 PF04357 TamB, inner membrane protein subunit of TAM complex LOKO_RS09305 PF01625 Peptide methionine sulfoxide reductase LOKO_RS09310 PF00561 alpha/beta hydrolase fold LOKO_RS09315 PF00557 Metallopeptidase family M24 LOKO_RS09320 PF00484 Carbonic anhydrase LOKO_RS09325 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LOKO_RS09325 PF07992 Pyridine nucleotide-disulphide oxidoreductase LOKO_RS09330 PF00583 Acetyltransferase (GNAT) family LOKO_RS09335 PF00202 Aminotransferase class-III LOKO_RS09340 PF06339 Ectoine synthase LOKO_RS09350 PF03334 Na+/H+ antiporter subunit LOKO_RS09375 PF11740 Plasmid replication region DNA-binding N-term LOKO_RS09380 PF01521 Iron-sulphur cluster biosynthesis LOKO_RS09380 PF01106 NifU-like domain LOKO_RS09385 PF02965 Vitamin B12 dependent methionine synthase, activation domain LOKO_RS09385 PF02607 B12 binding domain LOKO_RS09385 PF02310 B12 binding domain LOKO_RS09385 PF02574 Homocysteine S-methyltransferase LOKO_RS09385 PF00809 Pterin binding enzyme LOKO_RS09390 PF01554 MatE LOKO_RS09395 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LOKO_RS09395 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LOKO_RS09405 PF01713 Smr domain LOKO_RS09415 PF03960 ArsC family LOKO_RS09420 PF03358 NADPH-dependent FMN reductase LOKO_RS09430 PF01243 Pyridoxamine 5'-phosphate oxidase LOKO_RS09430 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LOKO_RS09440 PF13495 Phage integrase, N-terminal SAM-like domain LOKO_RS09440 PF00589 Phage integrase family LOKO_RS09445 PF08378 Nuclease-related domain LOKO_RS09450 PF10503 Esterase PHB depolymerase LOKO_RS09460 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS09470 PF03707 Bacterial signalling protein N terminal repeat LOKO_RS09470 PF00563 EAL domain LOKO_RS09470 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS09500 PF12843 Putative quorum-sensing-regulated virulence factor LOKO_RS09510 PF02562 PhoH-like protein LOKO_RS09510 PF13638 PIN domain LOKO_RS09515 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LOKO_RS09515 PF00361 Proton-conducting membrane transporter LOKO_RS09515 PF13244 Domain of unknown function (DUF4040) LOKO_RS09520 PF00361 Proton-conducting membrane transporter LOKO_RS09525 PF00361 Proton-conducting membrane transporter LOKO_RS09540 PF00291 Pyridoxal-phosphate dependent enzyme LOKO_RS09550 PF02230 Phospholipase/Carboxylesterase LOKO_RS09555 PF02080 TrkA-C domain LOKO_RS09555 PF03600 Citrate transporter LOKO_RS09560 PF00313 'Cold-shock' DNA-binding domain LOKO_RS09565 PF00313 'Cold-shock' DNA-binding domain LOKO_RS09570 PF00732 GMC oxidoreductase LOKO_RS09570 PF05199 GMC oxidoreductase LOKO_RS09575 PF00171 Aldehyde dehydrogenase family LOKO_RS09580 PF03466 LysR substrate binding domain LOKO_RS09580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOKO_RS09590 PF08443 RimK-like ATP-grasp domain LOKO_RS09590 PF18030 RimK PreATP-grasp domain LOKO_RS09595 PF01475 Ferric uptake regulator family LOKO_RS09600 PF01502 Phosphoribosyl-AMP cyclohydrolase LOKO_RS09605 PF01809 Putative membrane protein insertion efficiency factor LOKO_RS09620 PF02657 Fe-S metabolism associated domain LOKO_RS09635 PF00072 Response regulator receiver domain LOKO_RS09635 PF00196 Bacterial regulatory proteins, luxR family LOKO_RS09640 PF00529 HlyD membrane-fusion protein of T1SS LOKO_RS09640 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LOKO_RS09645 PF00005 ABC transporter LOKO_RS09645 PF03412 Peptidase C39 family LOKO_RS09645 PF00664 ABC transporter transmembrane region LOKO_RS09650 PF01389 OmpA-like transmembrane domain LOKO_RS09650 PF00691 OmpA family LOKO_RS09660 PF02926 THUMP domain LOKO_RS09660 PF02568 Thiamine biosynthesis protein (ThiI) LOKO_RS09670 PF00873 AcrB/AcrD/AcrF family LOKO_RS09675 PF02554 Carbon starvation protein CstA LOKO_RS09675 PF13722 5TM C-terminal transporter carbon starvation CstA LOKO_RS09685 PF12706 Beta-lactamase superfamily domain LOKO_RS09700 PF00211 Adenylate and Guanylate cyclase catalytic domain LOKO_RS09710 PF01063 Amino-transferase class IV LOKO_RS09715 PF00850 Histone deacetylase domain LOKO_RS09720 PF02423 Ornithine cyclodeaminase/mu-crystallin family LOKO_RS09725 PF01042 Endoribonuclease L-PSP LOKO_RS09730 PF00850 Histone deacetylase domain LOKO_RS09735 PF10114 Sensory domain found in PocR LOKO_RS09735 PF12833 Helix-turn-helix domain LOKO_RS09750 PF00027 Cyclic nucleotide-binding domain LOKO_RS09750 PF13545 Crp-like helix-turn-helix domain LOKO_RS09755 PF04717 Type VI secretion system, phage-baseplate injector LOKO_RS09760 PF05638 Type VI secretion system effector, Hcp LOKO_RS09765 PF01258 Prokaryotic dksA/traR C4-type zinc finger LOKO_RS09770 PF02492 CobW/HypB/UreG, nucleotide-binding domain LOKO_RS09770 PF07683 Cobalamin synthesis protein cobW C-terminal domain LOKO_RS09775 PF01544 CorA-like Mg2+ transporter protein LOKO_RS09790 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS09795 PF00005 ABC transporter LOKO_RS09800 PF12849 PBP superfamily domain LOKO_RS09805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOKO_RS09805 PF03466 LysR substrate binding domain LOKO_RS09815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LOKO_RS09815 PF02770 Acyl-CoA dehydrogenase, middle domain LOKO_RS09815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LOKO_RS09820 PF01039 Carboxyl transferase domain LOKO_RS09825 PF00378 Enoyl-CoA hydratase/isomerase LOKO_RS09830 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LOKO_RS09830 PF02785 Biotin carboxylase C-terminal domain LOKO_RS09830 PF00289 Biotin carboxylase, N-terminal domain LOKO_RS09830 PF00364 Biotin-requiring enzyme LOKO_RS09835 PF00682 HMGL-like LOKO_RS09840 PF13649 Methyltransferase domain LOKO_RS09850 PF00440 Bacterial regulatory proteins, tetR family LOKO_RS09865 PF00291 Pyridoxal-phosphate dependent enzyme LOKO_RS09865 PF13291 ACT domain LOKO_RS09875 PF18158 Adaptive response protein AidB N-terminal domain LOKO_RS09875 PF02770 Acyl-CoA dehydrogenase, middle domain LOKO_RS09875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LOKO_RS09885 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) LOKO_RS09890 PF06434 Aconitate hydratase 2 N-terminus LOKO_RS09890 PF11791 Aconitate B N-terminal domain LOKO_RS09890 PF00330 Aconitase family (aconitate hydratase) LOKO_RS09900 PF03737 Aldolase/RraA LOKO_RS09905 PF03009 Glycerophosphoryl diester phosphodiesterase family LOKO_RS09915 PF00391 PEP-utilising enzyme, mobile domain LOKO_RS09915 PF02896 PEP-utilising enzyme, TIM barrel domain LOKO_RS09915 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LOKO_RS09920 PF07683 Cobalamin synthesis protein cobW C-terminal domain LOKO_RS09920 PF02492 CobW/HypB/UreG, nucleotide-binding domain LOKO_RS09925 PF00768 D-alanyl-D-alanine carboxypeptidase LOKO_RS09925 PF07943 Penicillin-binding protein 5, C-terminal domain LOKO_RS09935 PF00892 EamA-like transporter family LOKO_RS09940 PF00950 ABC 3 transport family LOKO_RS09945 PF00005 ABC transporter LOKO_RS09950 PF01325 Iron dependent repressor, N-terminal DNA binding domain LOKO_RS09950 PF02742 Iron dependent repressor, metal binding and dimerisation domain LOKO_RS09955 PF02581 Thiamine monophosphate synthase LOKO_RS09960 PF01476 LysM domain LOKO_RS09960 PF00877 NlpC/P60 family LOKO_RS09965 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LOKO_RS09970 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LOKO_RS09980 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LOKO_RS09980 PF02770 Acyl-CoA dehydrogenase, middle domain LOKO_RS09980 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LOKO_RS09985 PF09278 MerR, DNA binding LOKO_RS09985 PF00376 MerR family regulatory protein LOKO_RS09990 PF00501 AMP-binding enzyme LOKO_RS09990 PF13193 AMP-binding enzyme C-terminal domain LOKO_RS09995 PF00156 Phosphoribosyl transferase domain LOKO_RS10000 PF00933 Glycosyl hydrolase family 3 N terminal domain LOKO_RS10010 PF00440 Bacterial regulatory proteins, tetR family LOKO_RS10015 PF01726 LexA DNA binding domain LOKO_RS10015 PF00717 Peptidase S24-like LOKO_RS10020 PF11799 impB/mucB/samB family C-terminal domain LOKO_RS10020 PF11798 IMS family HHH motif LOKO_RS10020 PF00817 impB/mucB/samB family LOKO_RS10030 PF00551 Formyl transferase LOKO_RS10035 PF12706 Beta-lactamase superfamily domain LOKO_RS10035 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LOKO_RS10035 PF17770 Ribonuclease J C-terminal domain LOKO_RS10045 PF04055 Radical SAM superfamily LOKO_RS10045 PF06463 Molybdenum Cofactor Synthesis C LOKO_RS10050 PF02391 MoaE protein LOKO_RS10055 PF01967 MoaC family LOKO_RS10060 PF03454 MoeA C-terminal region (domain IV) LOKO_RS10060 PF00994 Probable molybdopterin binding domain LOKO_RS10060 PF03453 MoeA N-terminal region (domain I and II) LOKO_RS10065 PF03205 Molybdopterin guanine dinucleotide synthesis protein B LOKO_RS10070 PF12804 MobA-like NTP transferase domain LOKO_RS10075 PF01381 Helix-turn-helix LOKO_RS10075 PF07883 Cupin domain LOKO_RS10080 PF00860 Permease family LOKO_RS10090 PF03167 Uracil DNA glycosylase superfamily LOKO_RS10095 PF00156 Phosphoribosyl transferase domain LOKO_RS10100 PF00156 Phosphoribosyl transferase domain LOKO_RS10105 PF00860 Permease family LOKO_RS10110 PF00677 Lumazine binding domain LOKO_RS10115 PF09383 NIL domain LOKO_RS10115 PF00005 ABC transporter LOKO_RS10120 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS10125 PF03180 NLPA lipoprotein LOKO_RS10130 PF13185 GAF domain LOKO_RS10140 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LOKO_RS10140 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LOKO_RS10145 PF00455 DeoR C terminal sensor domain LOKO_RS10145 PF08220 DeoR-like helix-turn-helix domain LOKO_RS10150 PF01266 FAD dependent oxidoreductase LOKO_RS10150 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LOKO_RS10155 PF10415 Fumarase C C-terminus LOKO_RS10155 PF00206 Lyase LOKO_RS10165 PF00325 Bacterial regulatory proteins, crp family LOKO_RS10165 PF00027 Cyclic nucleotide-binding domain LOKO_RS10185 PF03707 Bacterial signalling protein N terminal repeat LOKO_RS10185 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS10185 PF00563 EAL domain LOKO_RS10190 PF00311 Phosphoenolpyruvate carboxylase LOKO_RS10195 PF03819 MazG nucleotide pyrophosphohydrolase domain LOKO_RS10200 PF01627 Hpt domain LOKO_RS10200 PF00672 HAMP domain LOKO_RS10200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOKO_RS10200 PF00512 His Kinase A (phospho-acceptor) domain LOKO_RS10200 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LOKO_RS10200 PF00072 Response regulator receiver domain LOKO_RS10205 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LOKO_RS10210 PF11967 Recombination protein O N terminal LOKO_RS10210 PF02565 Recombination protein O C terminal LOKO_RS10215 PF07650 KH domain LOKO_RS10215 PF01926 50S ribosome-binding GTPase LOKO_RS10220 PF00035 Double-stranded RNA binding motif LOKO_RS10220 PF14622 Ribonuclease-III-like LOKO_RS10225 PF10502 Signal peptidase, peptidase S26 LOKO_RS10230 PF03144 Elongation factor Tu domain 2 LOKO_RS10230 PF06421 GTP-binding protein LepA C-terminus LOKO_RS10230 PF00009 Elongation factor Tu GTP binding domain LOKO_RS10230 PF00679 Elongation factor G C-terminus LOKO_RS10235 PF13180 PDZ domain LOKO_RS10245 PF03873 Anti sigma-E protein RseA, C-terminal domain LOKO_RS10245 PF03872 Anti sigma-E protein RseA, N-terminal domain LOKO_RS10250 PF04542 Sigma-70 region 2 LOKO_RS10250 PF08281 Sigma-70, region 4 LOKO_RS10255 PF00793 DAHP synthetase I family LOKO_RS10260 PF06733 DEAD_2 LOKO_RS10260 PF13307 Helicase C-terminal domain LOKO_RS10265 PF00271 Helicase conserved C-terminal domain LOKO_RS10265 PF00270 DEAD/DEAH box helicase LOKO_RS10270 PF00271 Helicase conserved C-terminal domain LOKO_RS10270 PF00270 DEAD/DEAH box helicase LOKO_RS10280 PF03372 Endonuclease/Exonuclease/phosphatase family LOKO_RS10290 PF02472 Biopolymer transport protein ExbD/TolR LOKO_RS10295 PF01618 MotA/TolQ/ExbB proton channel family LOKO_RS10300 PF01618 MotA/TolQ/ExbB proton channel family LOKO_RS10310 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LOKO_RS10310 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LOKO_RS10315 PF00583 Acetyltransferase (GNAT) family LOKO_RS10315 PF13607 Succinyl-CoA ligase like flavodoxin domain LOKO_RS10315 PF13380 CoA binding domain LOKO_RS10320 PF00850 Histone deacetylase domain LOKO_RS10325 PF01381 Helix-turn-helix LOKO_RS10325 PF08671 Anti-repressor SinI LOKO_RS10330 PF02634 FdhD/NarQ family LOKO_RS10340 PF00994 Probable molybdopterin binding domain LOKO_RS10345 PF03454 MoeA C-terminal region (domain IV) LOKO_RS10345 PF00994 Probable molybdopterin binding domain LOKO_RS10345 PF03453 MoeA N-terminal region (domain I and II) LOKO_RS10355 PF04358 DsrC like protein LOKO_RS10370 PF02635 DsrE/DsrF-like family LOKO_RS10375 PF01027 Inhibitor of apoptosis-promoting Bax1 LOKO_RS10395 PF07152 YaeQ protein LOKO_RS10400 PF00999 Sodium/hydrogen exchanger family LOKO_RS10400 PF02080 TrkA-C domain LOKO_RS10400 PF03471 Transporter associated domain LOKO_RS10405 PF09084 NMT1/THI5 like LOKO_RS10410 PF12697 Alpha/beta hydrolase family LOKO_RS10415 PF02592 Putative vitamin uptake transporter LOKO_RS10420 PF13193 AMP-binding enzyme C-terminal domain LOKO_RS10420 PF00501 AMP-binding enzyme LOKO_RS10420 PF16177 Acetyl-coenzyme A synthetase N-terminus LOKO_RS10425 PF01022 Bacterial regulatory protein, arsR family LOKO_RS10430 PF08496 Peptidase family S49 N-terminal LOKO_RS10430 PF01343 Peptidase family S49 LOKO_RS10440 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain LOKO_RS10440 PF00293 NUDIX domain LOKO_RS10440 PF09297 NADH pyrophosphatase zinc ribbon domain LOKO_RS10445 PF00929 Exonuclease LOKO_RS10450 PF00075 RNase H LOKO_RS10460 PF16123 Hydroxyacylglutathione hydrolase C-terminus LOKO_RS10460 PF00753 Metallo-beta-lactamase superfamily LOKO_RS10470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LOKO_RS10475 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS10480 PF12911 N-terminal TM domain of oligopeptide transport permease C LOKO_RS10480 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS10485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LOKO_RS10485 PF00005 ABC transporter LOKO_RS10490 PF01479 S4 domain LOKO_RS10490 PF00849 RNA pseudouridylate synthase LOKO_RS10495 PF00795 Carbon-nitrogen hydrolase LOKO_RS10500 PF00892 EamA-like transporter family LOKO_RS10505 PF00672 HAMP domain LOKO_RS10505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LOKO_RS10510 PF07282 Putative transposase DNA-binding domain LOKO_RS10510 PF12323 Helix-turn-helix domain LOKO_RS10510 PF01385 Probable transposase LOKO_RS10515 PF01053 Cys/Met metabolism PLP-dependent enzyme LOKO_RS10520 PF00916 Sulfate permease family LOKO_RS10520 PF01740 STAS domain LOKO_RS10535 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LOKO_RS10535 PF00378 Enoyl-CoA hydratase/isomerase LOKO_RS10535 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LOKO_RS10540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LOKO_RS10540 PF02770 Acyl-CoA dehydrogenase, middle domain LOKO_RS10540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LOKO_RS10545 PF02770 Acyl-CoA dehydrogenase, middle domain LOKO_RS10545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LOKO_RS10545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LOKO_RS10550 PF01012 Electron transfer flavoprotein domain LOKO_RS10550 PF00766 Electron transfer flavoprotein FAD-binding domain LOKO_RS10555 PF01012 Electron transfer flavoprotein domain LOKO_RS10565 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LOKO_RS10570 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LOKO_RS10570 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LOKO_RS10575 PF00581 Rhodanese-like domain LOKO_RS10580 PF13361 UvrD-like helicase C-terminal domain LOKO_RS10580 PF00580 UvrD/REP helicase N-terminal domain LOKO_RS10590 PF01026 TatD related DNase LOKO_RS10605 PF02789 Cytosol aminopeptidase family, N-terminal domain LOKO_RS10605 PF00883 Cytosol aminopeptidase family, catalytic domain LOKO_RS10610 PF05958 tRNA (Uracil-5-)-methyltransferase LOKO_RS10610 PF01938 TRAM domain LOKO_RS10615 PF00291 Pyridoxal-phosphate dependent enzyme LOKO_RS10620 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LOKO_RS10620 PF00072 Response regulator receiver domain LOKO_RS10620 PF01627 Hpt domain LOKO_RS10620 PF00512 His Kinase A (phospho-acceptor) domain LOKO_RS10620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOKO_RS10620 PF00672 HAMP domain LOKO_RS10625 PF03466 LysR substrate binding domain LOKO_RS10625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOKO_RS10645 PF08240 Alcohol dehydrogenase GroES-like domain LOKO_RS10645 PF00107 Zinc-binding dehydrogenase LOKO_RS10655 PF02653 Branched-chain amino acid transport system / permease component LOKO_RS10665 PF00005 ABC transporter LOKO_RS10670 PF12399 Branched-chain amino acid ATP-binding cassette transporter LOKO_RS10670 PF00005 ABC transporter LOKO_RS10680 PF03747 ADP-ribosylglycohydrolase LOKO_RS10695 PF03315 Serine dehydratase beta chain LOKO_RS10695 PF03313 Serine dehydratase alpha chain LOKO_RS10700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOKO_RS10700 PF03466 LysR substrate binding domain LOKO_RS10705 PF04539 Sigma-70 region 3 LOKO_RS10705 PF04542 Sigma-70 region 2 LOKO_RS10705 PF00140 Sigma-70 factor, region 1.2 LOKO_RS10705 PF03979 Sigma-70 factor, region 1.1 LOKO_RS10705 PF04546 Sigma-70, non-essential region LOKO_RS10705 PF04545 Sigma-70, region 4 LOKO_RS10710 PF10410 DnaB-helicase binding domain of primase LOKO_RS10710 PF01807 CHC2 zinc finger LOKO_RS10710 PF08278 DNA primase DnaG DnaB-binding LOKO_RS10710 PF13662 Toprim domain LOKO_RS10710 PF08275 DNA primase catalytic core, N-terminal domain LOKO_RS10715 PF01165 Ribosomal protein S21 LOKO_RS10720 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS10720 PF03707 Bacterial signalling protein N terminal repeat LOKO_RS10720 PF00563 EAL domain LOKO_RS10725 PF00814 Glycoprotease family LOKO_RS10730 PF02660 Glycerol-3-phosphate acyltransferase LOKO_RS10735 PF02152 Dihydroneopterin aldolase LOKO_RS10740 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LOKO_RS10740 PF00809 Pterin binding enzyme LOKO_RS10750 PF12627 Probable RNA and SrmB- binding site of polymerase A LOKO_RS10750 PF01743 Poly A polymerase head domain LOKO_RS10750 PF01966 HD domain LOKO_RS10755 PF00581 Rhodanese-like domain LOKO_RS10760 PF00149 Calcineurin-like phosphoesterase LOKO_RS10765 PF04379 ApaG domain LOKO_RS10770 PF00398 Ribosomal RNA adenine dimethylase LOKO_RS10775 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LOKO_RS10780 PF09312 SurA N-terminal domain LOKO_RS10780 PF00639 PPIC-type PPIASE domain LOKO_RS10780 PF09312 SurA N-terminal domain LOKO_RS10780 PF00639 PPIC-type PPIASE domain LOKO_RS10785 PF04453 LPS transport system D LOKO_RS10785 PF03968 OstA-like protein LOKO_RS10790 PF01636 Phosphotransferase enzyme family LOKO_RS10795 PF00483 Nucleotidyl transferase LOKO_RS10800 PF02566 OsmC-like protein LOKO_RS10805 PF03232 Ubiquinone biosynthesis protein COQ7 LOKO_RS10810 PF01230 HIT domain LOKO_RS10815 PF00485 Phosphoribulokinase / Uridine kinase family LOKO_RS10825 PF02844 Phosphoribosylglycinamide synthetase, N domain LOKO_RS10825 PF02843 Phosphoribosylglycinamide synthetase, C domain LOKO_RS10825 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LOKO_RS10830 PF05233 PHB accumulation regulatory domain LOKO_RS10830 PF07879 PHB/PHA accumulation regulator DNA-binding domain LOKO_RS10840 PF08443 RimK-like ATP-grasp domain LOKO_RS10840 PF18030 RimK PreATP-grasp domain LOKO_RS10850 PF13406 Transglycosylase SLT domain LOKO_RS10855 PF03334 Na+/H+ antiporter subunit LOKO_RS10860 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) LOKO_RS10865 PF01899 Na+/H+ ion antiporter subunit LOKO_RS10870 PF00361 Proton-conducting membrane transporter LOKO_RS10875 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LOKO_RS10880 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter LOKO_RS10885 PF13244 Domain of unknown function (DUF4040) LOKO_RS10885 PF00361 Proton-conducting membrane transporter LOKO_RS10885 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LOKO_RS10890 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter LOKO_RS10890 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LOKO_RS10890 PF13244 Domain of unknown function (DUF4040) LOKO_RS10890 PF00361 Proton-conducting membrane transporter LOKO_RS10895 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LOKO_RS10900 PF00361 Proton-conducting membrane transporter LOKO_RS10910 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) LOKO_RS10920 PF00762 Ferrochelatase LOKO_RS10935 PF00772 DnaB-like helicase N terminal domain LOKO_RS10935 PF03796 DnaB-like helicase C terminal domain LOKO_RS10940 PF11471 Maltoporin periplasmic N-terminal extension LOKO_RS10940 PF02264 LamB porin LOKO_RS10945 PF03948 Ribosomal protein L9, C-terminal domain LOKO_RS10945 PF01281 Ribosomal protein L9, N-terminal domain LOKO_RS10955 PF01084 Ribosomal protein S18 LOKO_RS10960 PF01250 Ribosomal protein S6 LOKO_RS10965 PF08032 RNA 2'-O ribose methyltransferase substrate binding LOKO_RS10965 PF00588 SpoU rRNA Methylase family LOKO_RS10970 PF08461 Ribonuclease R winged-helix domain LOKO_RS10970 PF08206 Ribonuclease B OB domain LOKO_RS10970 PF00773 RNB domain LOKO_RS10970 PF00575 S1 RNA binding domain LOKO_RS10970 PF17876 Cold shock domain LOKO_RS10990 PF00361 Proton-conducting membrane transporter LOKO_RS11000 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LOKO_RS11000 PF00361 Proton-conducting membrane transporter LOKO_RS11005 PF00361 Proton-conducting membrane transporter LOKO_RS11010 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LOKO_RS11025 PF03334 Na+/H+ antiporter subunit LOKO_RS11030 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) LOKO_RS11040 PF01223 DNA/RNA non-specific endonuclease LOKO_RS11055 PF00115 Cytochrome C and Quinol oxidase polypeptide I LOKO_RS11060 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LOKO_RS11060 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LOKO_RS11065 PF03050 Transposase IS66 family LOKO_RS11065 PF13817 IS66 C-terminal element LOKO_RS11065 PF13005 zinc-finger binding domain of transposase IS66 LOKO_RS11065 PF13007 Transposase C of IS166 homeodomain LOKO_RS11075 PF02743 Cache domain LOKO_RS11075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LOKO_RS11075 PF00672 HAMP domain LOKO_RS11090 PF03883 Peroxide stress protein YaaA LOKO_RS11095 PF00248 Aldo/keto reductase family LOKO_RS11110 PF03641 Possible lysine decarboxylase LOKO_RS11125 PF04073 Aminoacyl-tRNA editing domain LOKO_RS11145 PF00155 Aminotransferase class I and II LOKO_RS11150 PF00085 Thioredoxin LOKO_RS11155 PF00156 Phosphoribosyl transferase domain LOKO_RS11165 PF03725 3' exoribonuclease family, domain 2 LOKO_RS11165 PF01138 3' exoribonuclease family, domain 1 LOKO_RS11170 PF08340 Domain of unknown function (DUF1732) LOKO_RS11170 PF03755 YicC-like family, N-terminal region LOKO_RS11175 PF13188 PAS domain LOKO_RS11175 PF00072 Response regulator receiver domain LOKO_RS11175 PF08448 PAS fold LOKO_RS11175 PF00512 His Kinase A (phospho-acceptor) domain LOKO_RS11175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOKO_RS11180 PF00360 Phytochrome region LOKO_RS11180 PF01590 GAF domain LOKO_RS11180 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS11180 PF00563 EAL domain LOKO_RS11185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOKO_RS11185 PF00072 Response regulator receiver domain LOKO_RS11185 PF13426 PAS domain LOKO_RS11190 PF00625 Guanylate kinase LOKO_RS11195 PF01192 RNA polymerase Rpb6 LOKO_RS11200 PF04607 Region found in RelA / SpoT proteins LOKO_RS11200 PF13291 ACT domain LOKO_RS11200 PF02824 TGS domain LOKO_RS11205 PF01042 Endoribonuclease L-PSP LOKO_RS11220 PF03466 LysR substrate binding domain LOKO_RS11220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOKO_RS11225 PF00271 Helicase conserved C-terminal domain LOKO_RS11225 PF00270 DEAD/DEAH box helicase LOKO_RS11225 PF17191 RecG wedge domain LOKO_RS11235 PF00216 Bacterial DNA-binding protein LOKO_RS11240 PF07992 Pyridine nucleotide-disulphide oxidoreductase LOKO_RS11240 PF18113 Rubredoxin binding C-terminal domain LOKO_RS11245 PF04345 Chorismate lyase LOKO_RS11250 PF01040 UbiA prenyltransferase family LOKO_RS11255 PF00202 Aminotransferase class-III LOKO_RS11270 PF03061 Thioesterase superfamily LOKO_RS11275 PF03480 Bacterial extracellular solute-binding protein, family 7 LOKO_RS11280 PF00580 UvrD/REP helicase N-terminal domain LOKO_RS11280 PF13361 UvrD-like helicase C-terminal domain LOKO_RS11285 PF01380 SIS domain LOKO_RS11285 PF01418 Helix-turn-helix domain, rpiR family LOKO_RS11295 PF00209 Sodium:neurotransmitter symporter family LOKO_RS11300 PF01569 PAP2 superfamily LOKO_RS11305 PF01380 SIS domain LOKO_RS11310 PF00132 Bacterial transferase hexapeptide (six repeats) LOKO_RS11310 PF14602 Hexapeptide repeat of succinyl-transferase LOKO_RS11310 PF12804 MobA-like NTP transferase domain LOKO_RS11315 PF02424 ApbE family LOKO_RS11320 PF02673 Bacitracin resistance protein BacA LOKO_RS11335 PF07992 Pyridine nucleotide-disulphide oxidoreductase LOKO_RS11335 PF10518 TAT (twin-arginine translocation) pathway signal sequence LOKO_RS11335 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding LOKO_RS11370 PF01661 Macro domain LOKO_RS11375 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LOKO_RS11385 PF03480 Bacterial extracellular solute-binding protein, family 7 LOKO_RS11390 PF00892 EamA-like transporter family LOKO_RS11400 PF08402 TOBE domain LOKO_RS11400 PF00005 ABC transporter LOKO_RS11405 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS11420 PF00224 Pyruvate kinase, barrel domain LOKO_RS11420 PF02887 Pyruvate kinase, alpha/beta domain LOKO_RS11430 PF01081 KDPG and KHG aldolase LOKO_RS11435 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LOKO_RS11440 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LOKO_RS11440 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LOKO_RS11445 PF01380 SIS domain LOKO_RS11445 PF01418 Helix-turn-helix domain, rpiR family LOKO_RS11465 PF00582 Universal stress protein family LOKO_RS11470 PF01740 STAS domain LOKO_RS11470 PF00916 Sulfate permease family LOKO_RS11480 PF00005 ABC transporter LOKO_RS11485 PF04542 Sigma-70 region 2 LOKO_RS11485 PF08281 Sigma-70, region 4 LOKO_RS11500 PF13419 Haloacid dehalogenase-like hydrolase LOKO_RS11505 PF00291 Pyridoxal-phosphate dependent enzyme LOKO_RS11510 PF00202 Aminotransferase class-III LOKO_RS11515 PF00171 Aldehyde dehydrogenase family LOKO_RS11520 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LOKO_RS11520 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LOKO_RS11520 PF01276 Orn/Lys/Arg decarboxylase, major domain LOKO_RS11535 PF08666 SAF domain LOKO_RS11535 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus LOKO_RS11545 PF01557 Fumarylacetoacetate (FAA) hydrolase family LOKO_RS11560 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LOKO_RS11560 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LOKO_RS11565 PF13649 Methyltransferase domain LOKO_RS11570 PF00893 Small Multidrug Resistance protein LOKO_RS11580 PF01219 Prokaryotic diacylglycerol kinase LOKO_RS11585 PF08335 GlnD PII-uridylyltransferase LOKO_RS11585 PF03710 Glutamate-ammonia ligase adenylyltransferase LOKO_RS11590 PF01220 Dehydroquinase class II LOKO_RS11595 PF06796 Periplasmic nitrate reductase protein NapE LOKO_RS11600 PF12800 4Fe-4S binding domain LOKO_RS11600 PF13187 4Fe-4S dicluster domain LOKO_RS11600 PF00037 4Fe-4S binding domain LOKO_RS11610 PF00384 Molybdopterin oxidoreductase LOKO_RS11610 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LOKO_RS11610 PF01568 Molydopterin dinucleotide binding domain LOKO_RS11615 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) LOKO_RS11620 PF03264 NapC/NirT cytochrome c family, N-terminal region LOKO_RS11625 PF01593 Flavin containing amine oxidoreductase LOKO_RS11630 PF00378 Enoyl-CoA hydratase/isomerase LOKO_RS11635 PF00582 Universal stress protein family LOKO_RS11640 PF05230 MASE2 domain LOKO_RS11640 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS11645 PF08241 Methyltransferase domain LOKO_RS11650 PF00672 HAMP domain LOKO_RS11650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LOKO_RS11650 PF02203 Tar ligand binding domain homologue LOKO_RS11670 PF00296 Luciferase-like monooxygenase LOKO_RS11695 PF01590 GAF domain LOKO_RS11695 PF00563 EAL domain LOKO_RS11695 PF00360 Phytochrome region LOKO_RS11695 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS11720 PF00561 alpha/beta hydrolase fold LOKO_RS11730 PF03631 Virulence factor BrkB LOKO_RS11735 PF03060 Nitronate monooxygenase LOKO_RS11740 PF08774 VRR-NUC domain LOKO_RS11740 PF18081 Fanconi anemia-associated nuclease SAP domain LOKO_RS11745 PF13307 Helicase C-terminal domain LOKO_RS11745 PF04851 Type III restriction enzyme, res subunit LOKO_RS11750 PF00999 Sodium/hydrogen exchanger family LOKO_RS11750 PF02254 TrkA-N domain LOKO_RS11770 PF01145 SPFH domain / Band 7 family LOKO_RS11775 PF01957 NfeD-like C-terminal, partner-binding LOKO_RS11775 PF01972 Serine dehydrogenase proteinase LOKO_RS11785 PF13416 Bacterial extracellular solute-binding protein LOKO_RS11790 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS11805 PF08402 TOBE domain LOKO_RS11805 PF00005 ABC transporter LOKO_RS11810 PF00398 Ribosomal RNA adenine dimethylase LOKO_RS11815 PF00266 Aminotransferase class-V LOKO_RS11820 PF00571 CBS domain LOKO_RS11830 PF00924 Mechanosensitive ion channel LOKO_RS11840 PF07722 Peptidase C26 LOKO_RS11845 PF02566 OsmC-like protein LOKO_RS11850 PF00248 Aldo/keto reductase family LOKO_RS11860 PF04493 Endonuclease V LOKO_RS11865 PF00149 Calcineurin-like phosphoesterase LOKO_RS11865 PF12320 Type 5 capsule protein repressor C-terminal domain LOKO_RS11885 PF08386 TAP-like protein LOKO_RS11885 PF00561 alpha/beta hydrolase fold LOKO_RS11890 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system LOKO_RS11895 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system LOKO_RS11910 PF01420 Type I restriction modification DNA specificity domain LOKO_RS11915 PF02384 N-6 DNA Methylase LOKO_RS11920 PF13784 Fic/DOC family N-terminal LOKO_RS11920 PF02661 Fic/DOC family LOKO_RS11925 PF04851 Type III restriction enzyme, res subunit LOKO_RS11925 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LOKO_RS11925 PF08463 EcoEI R protein C-terminal LOKO_RS11925 PF00271 Helicase conserved C-terminal domain LOKO_RS11930 PF00141 Peroxidase LOKO_RS11935 PF01546 Peptidase family M20/M25/M40 LOKO_RS11935 PF07687 Peptidase dimerisation domain LOKO_RS11945 PF08450 SMP-30/Gluconolactonase/LRE-like region LOKO_RS11955 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LOKO_RS11955 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LOKO_RS11965 PF13407 Periplasmic binding protein domain LOKO_RS11970 PF02653 Branched-chain amino acid transport system / permease component LOKO_RS11975 PF00005 ABC transporter LOKO_RS11985 PF00480 ROK family LOKO_RS12000 PF00920 Dehydratase family LOKO_RS12010 PF01384 Phosphate transporter family LOKO_RS12015 PF01865 Protein of unknown function DUF47 LOKO_RS12025 PF00027 Cyclic nucleotide-binding domain LOKO_RS12025 PF00520 Ion transport protein LOKO_RS12030 PF01300 Telomere recombination LOKO_RS12035 PF02811 PHP domain LOKO_RS12040 PF03795 YCII-related domain LOKO_RS12045 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LOKO_RS12045 PF01266 FAD dependent oxidoreductase LOKO_RS12050 PF00563 EAL domain LOKO_RS12050 PF08448 PAS fold LOKO_RS12050 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS12055 PF06794 Uncharacterised protein family (UPF0270) LOKO_RS12060 PF12826 Helix-hairpin-helix motif LOKO_RS12060 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LOKO_RS12060 PF03120 NAD-dependent DNA ligase OB-fold domain LOKO_RS12060 PF01653 NAD-dependent DNA ligase adenylation domain LOKO_RS12060 PF00533 BRCA1 C Terminus (BRCT) domain LOKO_RS12065 PF04354 ZipA, C-terminal FtsZ-binding domain LOKO_RS12070 PF02463 RecF/RecN/SMC N terminal domain LOKO_RS12085 PF00664 ABC transporter transmembrane region LOKO_RS12085 PF00005 ABC transporter LOKO_RS12095 PF00132 Bacterial transferase hexapeptide (six repeats) LOKO_RS12100 PF07995 Glucose / Sorbosone dehydrogenase LOKO_RS12105 PF00512 His Kinase A (phospho-acceptor) domain LOKO_RS12105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOKO_RS12110 PF02954 Bacterial regulatory protein, Fis family LOKO_RS12110 PF00158 Sigma-54 interaction domain LOKO_RS12110 PF00072 Response regulator receiver domain LOKO_RS12125 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS12130 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS12140 PF00005 ABC transporter LOKO_RS12140 PF08402 TOBE domain LOKO_RS12145 PF01266 FAD dependent oxidoreductase LOKO_RS12155 PF02028 BCCT, betaine/carnitine/choline family transporter LOKO_RS12160 PF00563 EAL domain LOKO_RS12160 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS12160 PF03707 Bacterial signalling protein N terminal repeat LOKO_RS12180 PF00892 EamA-like transporter family LOKO_RS12185 PF00912 Transglycosylase LOKO_RS12190 PF00756 Putative esterase LOKO_RS12260 PF00717 Peptidase S24-like LOKO_RS12265 PF11799 impB/mucB/samB family C-terminal domain LOKO_RS12265 PF13438 Domain of unknown function (DUF4113) LOKO_RS12265 PF00817 impB/mucB/samB family LOKO_RS12305 PF01425 Amidase LOKO_RS12315 PF00857 Isochorismatase family LOKO_RS12320 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LOKO_RS12330 PF03480 Bacterial extracellular solute-binding protein, family 7 LOKO_RS12340 PF00330 Aconitase family (aconitate hydratase) LOKO_RS12345 PF00694 Aconitase C-terminal domain LOKO_RS12360 PF00465 Iron-containing alcohol dehydrogenase LOKO_RS12370 PF01970 Tripartite tricarboxylate transporter TctA family LOKO_RS12380 PF03401 Tripartite tricarboxylate transporter family receptor LOKO_RS12385 PF01527 Transposase LOKO_RS12390 PF13683 Integrase core domain LOKO_RS12390 PF13276 HTH-like domain LOKO_RS12400 PF03389 MobA/MobL family LOKO_RS12420 PF00486 Transcriptional regulatory protein, C terminal LOKO_RS12420 PF00072 Response regulator receiver domain LOKO_RS12425 PF02702 Osmosensitive K+ channel His kinase sensor domain LOKO_RS12425 PF13493 Domain of unknown function (DUF4118) LOKO_RS12425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOKO_RS12425 PF00512 His Kinase A (phospho-acceptor) domain LOKO_RS12430 PF02386 Cation transport protein LOKO_RS12440 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ LOKO_RS12445 PF03476 MOSC N-terminal beta barrel domain LOKO_RS12445 PF00111 2Fe-2S iron-sulfur cluster binding domain LOKO_RS12445 PF03473 MOSC domain LOKO_RS12470 PF00378 Enoyl-CoA hydratase/isomerase LOKO_RS12475 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LOKO_RS12475 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LOKO_RS12480 PF13193 AMP-binding enzyme C-terminal domain LOKO_RS12480 PF00501 AMP-binding enzyme LOKO_RS12485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LOKO_RS12485 PF02770 Acyl-CoA dehydrogenase, middle domain LOKO_RS12485 PF12806 Acetyl-CoA dehydrogenase C-terminal like LOKO_RS12485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LOKO_RS12500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LOKO_RS12520 PF03070 TENA/THI-4/PQQC family LOKO_RS12525 PF10137 Predicted nucleotide-binding protein containing TIR-like domain LOKO_RS12550 PF01209 ubiE/COQ5 methyltransferase family LOKO_RS12555 PF01523 Putative modulator of DNA gyrase LOKO_RS12565 PF00575 S1 RNA binding domain LOKO_RS12565 PF10150 Ribonuclease E/G family LOKO_RS12570 PF02545 Maf-like protein LOKO_RS12575 PF04093 rod shape-determining protein MreD LOKO_RS12580 PF04085 rod shape-determining protein MreC LOKO_RS12590 PF02686 Glu-tRNAGln amidotransferase C subunit LOKO_RS12595 PF01425 Amidase LOKO_RS12600 PF02637 GatB domain LOKO_RS12600 PF02934 GatB/GatE catalytic domain LOKO_RS12610 PF02203 Tar ligand binding domain homologue LOKO_RS12610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LOKO_RS12610 PF00672 HAMP domain LOKO_RS12615 PF02646 RmuC family LOKO_RS12620 PF00171 Aldehyde dehydrogenase family LOKO_RS12625 PF07722 Peptidase C26 LOKO_RS12630 PF00120 Glutamine synthetase, catalytic domain LOKO_RS12640 PF01266 FAD dependent oxidoreductase LOKO_RS12645 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS12650 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS12670 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LOKO_RS12670 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LOKO_RS12675 PF04408 Helicase associated domain (HA2) LOKO_RS12675 PF00271 Helicase conserved C-terminal domain LOKO_RS12675 PF00270 DEAD/DEAH box helicase LOKO_RS12675 PF08482 ATP-dependent helicase C-terminal LOKO_RS12680 PF00361 Proton-conducting membrane transporter LOKO_RS12695 PF02803 Thiolase, C-terminal domain LOKO_RS12695 PF00108 Thiolase, N-terminal domain LOKO_RS12705 PF03649 Uncharacterised protein family (UPF0014) LOKO_RS12710 PF00005 ABC transporter LOKO_RS12715 PF01758 Sodium Bile acid symporter family LOKO_RS12735 PF10518 TAT (twin-arginine translocation) pathway signal sequence LOKO_RS12735 PF01568 Molydopterin dinucleotide binding domain LOKO_RS12735 PF00384 Molybdopterin oxidoreductase LOKO_RS12735 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LOKO_RS12740 PF13247 4Fe-4S dicluster domain LOKO_RS12740 PF12800 4Fe-4S binding domain LOKO_RS12760 PF01022 Bacterial regulatory protein, arsR family LOKO_RS12770 PF07690 Major Facilitator Superfamily LOKO_RS12775 PF00923 Transaldolase/Fructose-6-phosphate aldolase LOKO_RS12790 PF04333 MlaA lipoprotein LOKO_RS12795 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LOKO_RS12795 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LOKO_RS12800 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LOKO_RS12800 PF11898 Domain of unknown function (DUF3418) LOKO_RS12800 PF04408 Helicase associated domain (HA2) LOKO_RS12800 PF00270 DEAD/DEAH box helicase LOKO_RS12800 PF00271 Helicase conserved C-terminal domain LOKO_RS12805 PF00501 AMP-binding enzyme LOKO_RS12805 PF13193 AMP-binding enzyme C-terminal domain LOKO_RS12810 PF13230 Glutamine amidotransferases class-II LOKO_RS12825 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LOKO_RS12825 PF00326 Prolyl oligopeptidase family LOKO_RS12830 PF03692 Putative zinc- or iron-chelating domain LOKO_RS12835 PF05166 YcgL domain LOKO_RS12840 PF01612 3'-5' exonuclease LOKO_RS12840 PF00570 HRDC domain LOKO_RS12845 PF13662 Toprim domain LOKO_RS12845 PF02132 RecR protein LOKO_RS12850 PF02575 YbaB/EbfC DNA-binding family LOKO_RS12855 PF12170 DNA polymerase III tau subunit V interacting with alpha LOKO_RS12855 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LOKO_RS12855 PF12169 DNA polymerase III subunits gamma and tau domain III LOKO_RS12865 PF01266 FAD dependent oxidoreductase LOKO_RS12870 PF00465 Iron-containing alcohol dehydrogenase LOKO_RS12875 PF00850 Histone deacetylase domain LOKO_RS12880 PF03466 LysR substrate binding domain LOKO_RS12880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOKO_RS12885 PF00202 Aminotransferase class-III LOKO_RS12890 PF01144 Coenzyme A transferase LOKO_RS12895 PF01144 Coenzyme A transferase LOKO_RS12900 PF07687 Peptidase dimerisation domain LOKO_RS12900 PF01546 Peptidase family M20/M25/M40 LOKO_RS12905 PF00108 Thiolase, N-terminal domain LOKO_RS12905 PF02803 Thiolase, C-terminal domain LOKO_RS12910 PF00497 Bacterial extracellular solute-binding proteins, family 3 LOKO_RS12915 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS12920 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS12925 PF00005 ABC transporter LOKO_RS12950 PF05145 Transition state regulatory protein AbrB LOKO_RS12955 PF01479 S4 domain LOKO_RS12955 PF01728 FtsJ-like methyltransferase LOKO_RS12960 PF00924 Mechanosensitive ion channel LOKO_RS12960 PF12795 Mechanosensitive ion channel porin domain LOKO_RS12960 PF12794 Mechanosensitive ion channel inner membrane domain 1 LOKO_RS12965 PF02253 Phospholipase A1 LOKO_RS12970 PF05957 Bacterial protein of unknown function (DUF883) LOKO_RS12995 PF10017 Histidine-specific methyltransferase, SAM-dependent LOKO_RS13005 PF03150 Di-haem cytochrome c peroxidase LOKO_RS13005 PF00034 Cytochrome c LOKO_RS13010 PF05726 Pirin C-terminal cupin domain LOKO_RS13010 PF02678 Pirin LOKO_RS13025 PF00881 Nitroreductase family LOKO_RS13030 PF14489 QueF-like protein LOKO_RS13030 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LOKO_RS13035 PF01061 ABC-2 type transporter LOKO_RS13040 PF00005 ABC transporter LOKO_RS13075 PF01641 SelR domain LOKO_RS13080 PF01926 50S ribosome-binding GTPase LOKO_RS13085 PF00155 Aminotransferase class I and II LOKO_RS13090 PF01435 Peptidase family M48 LOKO_RS13095 PF11890 Domain of unknown function (DUF3410) LOKO_RS13095 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LOKO_RS13095 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LOKO_RS13105 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS13105 PF00563 EAL domain LOKO_RS13105 PF03707 Bacterial signalling protein N terminal repeat LOKO_RS13115 PF10672 S-adenosylmethionine-dependent methyltransferase LOKO_RS13115 PF02926 THUMP domain LOKO_RS13115 PF01170 Putative RNA methylase family UPF0020 LOKO_RS13120 PF04957 Ribosome modulation factor LOKO_RS13125 PF01180 Dihydroorotate dehydrogenase LOKO_RS13130 PF05088 Bacterial NAD-glutamate dehydrogenase LOKO_RS13135 PF05958 tRNA (Uracil-5-)-methyltransferase LOKO_RS13140 PF05958 tRNA (Uracil-5-)-methyltransferase LOKO_RS13145 PF01177 Asp/Glu/Hydantoin racemase LOKO_RS13155 PF16193 AAA C-terminal domain LOKO_RS13155 PF00004 ATPase family associated with various cellular activities (AAA) LOKO_RS13155 PF12002 MgsA AAA+ ATPase C terminal LOKO_RS13160 PF03548 Outer membrane lipoprotein carrier protein LolA LOKO_RS13165 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LOKO_RS13165 PF01580 FtsK/SpoIIIE family LOKO_RS13165 PF17854 FtsK alpha domain LOKO_RS13165 PF09397 Ftsk gamma domain LOKO_RS13170 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LOKO_RS13175 PF04376 Arginine-tRNA-protein transferase, N terminus LOKO_RS13175 PF04377 Arginine-tRNA-protein transferase, C terminus LOKO_RS13180 PF01176 Translation initiation factor 1A / IF-1 LOKO_RS13185 PF10431 C-terminal, D2-small domain, of ClpB protein LOKO_RS13185 PF02861 Clp amino terminal domain, pathogenicity island component LOKO_RS13185 PF00004 ATPase family associated with various cellular activities (AAA) LOKO_RS13185 PF17871 AAA lid domain LOKO_RS13185 PF07724 AAA domain (Cdc48 subfamily) LOKO_RS13190 PF02617 ATP-dependent Clp protease adaptor protein ClpS LOKO_RS13195 PF00180 Isocitrate/isopropylmalate dehydrogenase LOKO_RS13200 PF03971 Monomeric isocitrate dehydrogenase LOKO_RS13205 PF00849 RNA pseudouridylate synthase LOKO_RS13210 PF00293 NUDIX domain LOKO_RS13210 PF13344 Haloacid dehalogenase-like hydrolase LOKO_RS13215 PF00873 AcrB/AcrD/AcrF family LOKO_RS13235 PF04356 Protein of unknown function (DUF489) LOKO_RS13240 PF08328 Adenylosuccinate lyase C-terminal LOKO_RS13240 PF00206 Lyase LOKO_RS13245 PF01923 Cobalamin adenosyltransferase LOKO_RS13250 PF08007 Cupin superfamily protein LOKO_RS13260 PF00463 Isocitrate lyase family LOKO_RS13265 PF05433 Glycine zipper 2TM domain LOKO_RS13275 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LOKO_RS13280 PF01066 CDP-alcohol phosphatidyltransferase LOKO_RS13285 PF07992 Pyridine nucleotide-disulphide oxidoreductase LOKO_RS13285 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LOKO_RS13290 PF01625 Peptide methionine sulfoxide reductase LOKO_RS13295 PF07690 Major Facilitator Superfamily LOKO_RS13300 PF03466 LysR substrate binding domain LOKO_RS13300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOKO_RS13305 PF00877 NlpC/P60 family LOKO_RS13315 PF00171 Aldehyde dehydrogenase family LOKO_RS13320 PF00202 Aminotransferase class-III LOKO_RS13325 PF18011 C-terminal domain found in long catalases LOKO_RS13325 PF00199 Catalase LOKO_RS13325 PF06628 Catalase-related immune-responsive LOKO_RS13345 PF04317 YcjX-like family, DUF463 LOKO_RS13350 PF05128 Domain of unknown function (DUF697) LOKO_RS13355 PF00582 Universal stress protein family LOKO_RS13365 PF00005 ABC transporter LOKO_RS13365 PF17912 MalK OB fold domain LOKO_RS13365 PF03459 TOBE domain LOKO_RS13375 PF00486 Transcriptional regulatory protein, C terminal LOKO_RS13375 PF00072 Response regulator receiver domain LOKO_RS13385 PF00575 S1 RNA binding domain LOKO_RS13385 PF17876 Cold shock domain LOKO_RS13385 PF08206 Ribonuclease B OB domain LOKO_RS13385 PF00773 RNB domain LOKO_RS13410 PF09345 Domain of unknown function (DUF1987) LOKO_RS13415 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS13425 PF01590 GAF domain LOKO_RS13425 PF00989 PAS fold LOKO_RS13425 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS13425 PF00563 EAL domain LOKO_RS13435 PF05598 Transposase domain (DUF772) LOKO_RS13435 PF01609 Transposase DDE domain LOKO_RS13440 PF02661 Fic/DOC family LOKO_RS13470 PF00589 Phage integrase family LOKO_RS13470 PF13356 Arm DNA-binding domain LOKO_RS13490 PF02635 DsrE/DsrF-like family LOKO_RS13495 PF00581 Rhodanese-like domain LOKO_RS13510 PF00764 Arginosuccinate synthase LOKO_RS13515 PF00929 Exonuclease LOKO_RS13520 PF00563 EAL domain LOKO_RS13520 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS13520 PF08447 PAS fold LOKO_RS13520 PF08448 PAS fold LOKO_RS13525 PF00072 Response regulator receiver domain LOKO_RS13525 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS13530 PF00462 Glutaredoxin LOKO_RS13535 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LOKO_RS13535 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LOKO_RS13540 PF03707 Bacterial signalling protein N terminal repeat LOKO_RS13540 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS13540 PF00563 EAL domain LOKO_RS13545 PF13677 Membrane MotB of proton-channel complex MotA/MotB LOKO_RS13545 PF00691 OmpA family LOKO_RS13550 PF01618 MotA/TolQ/ExbB proton channel family LOKO_RS13555 PF00563 EAL domain LOKO_RS13555 PF12792 CSS motif domain associated with EAL LOKO_RS13565 PF04545 Sigma-70, region 4 LOKO_RS13565 PF04539 Sigma-70 region 3 LOKO_RS13565 PF04542 Sigma-70 region 2 LOKO_RS13580 PF00448 SRP54-type protein, GTPase domain LOKO_RS13585 PF00771 FHIPEP family LOKO_RS13590 PF01312 FlhB HrpN YscU SpaS Family LOKO_RS13595 PF04344 Chemotaxis phosphatase, CheZ LOKO_RS13600 PF00072 Response regulator receiver domain LOKO_RS13605 PF02203 Tar ligand binding domain homologue LOKO_RS13605 PF00672 HAMP domain LOKO_RS13605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LOKO_RS13610 PF00072 Response regulator receiver domain LOKO_RS13610 PF01339 CheB methylesterase LOKO_RS13615 PF03705 CheR methyltransferase, all-alpha domain LOKO_RS13615 PF01739 CheR methyltransferase, SAM binding domain LOKO_RS13620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LOKO_RS13620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LOKO_RS13620 PF08447 PAS fold LOKO_RS13620 PF08447 PAS fold LOKO_RS13625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LOKO_RS13625 PF08447 PAS fold LOKO_RS13625 PF08447 PAS fold LOKO_RS13625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LOKO_RS13630 PF00672 HAMP domain LOKO_RS13630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LOKO_RS13630 PF02203 Tar ligand binding domain homologue LOKO_RS13635 PF01584 CheW-like domain LOKO_RS13640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOKO_RS13640 PF09078 CheY binding LOKO_RS13640 PF02895 Signal transducing histidine kinase, homodimeric domain LOKO_RS13640 PF01584 CheW-like domain LOKO_RS13640 PF01627 Hpt domain LOKO_RS13645 PF00691 OmpA family LOKO_RS13645 PF13677 Membrane MotB of proton-channel complex MotA/MotB LOKO_RS13650 PF01618 MotA/TolQ/ExbB proton channel family LOKO_RS13655 PF05280 Flagellar transcriptional activator (FlhC) LOKO_RS13660 PF05247 Flagellar transcriptional activator (FlhD) LOKO_RS13680 PF02561 Flagellar protein FliS LOKO_RS13685 PF02465 Flagellar hook-associated protein 2 N-terminus LOKO_RS13685 PF07195 Flagellar hook-associated protein 2 C-terminus LOKO_RS13690 PF07238 PilZ domain LOKO_RS13690 PF07317 Flagellar regulator YcgR LOKO_RS13695 PF00563 EAL domain LOKO_RS13695 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS13695 PF03707 Bacterial signalling protein N terminal repeat LOKO_RS13700 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS13700 PF00072 Response regulator receiver domain LOKO_RS13720 PF00665 Integrase core domain LOKO_RS13725 PF01695 IstB-like ATP binding protein LOKO_RS13735 PF02203 Tar ligand binding domain homologue LOKO_RS13735 PF00672 HAMP domain LOKO_RS13735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LOKO_RS13750 PF00669 Bacterial flagellin N-terminal helical region LOKO_RS13750 PF08884 Flagellin D3 domain LOKO_RS13750 PF00700 Bacterial flagellin C-terminal helical region LOKO_RS13755 PF00700 Bacterial flagellin C-terminal helical region LOKO_RS13755 PF08884 Flagellin D3 domain LOKO_RS13755 PF00669 Bacterial flagellin N-terminal helical region LOKO_RS13765 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LOKO_RS13770 PF00549 CoA-ligase LOKO_RS13770 PF02629 CoA binding domain LOKO_RS13775 PF00549 CoA-ligase LOKO_RS13775 PF08442 ATP-grasp domain LOKO_RS13780 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LOKO_RS13780 PF07992 Pyridine nucleotide-disulphide oxidoreductase LOKO_RS13785 PF02817 e3 binding domain LOKO_RS13785 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LOKO_RS13785 PF00364 Biotin-requiring enzyme LOKO_RS13790 PF16078 2-oxoglutarate dehydrogenase N-terminus LOKO_RS13790 PF00676 Dehydrogenase E1 component LOKO_RS13790 PF02779 Transketolase, pyrimidine binding domain LOKO_RS13790 PF16870 2-oxoglutarate dehydrogenase C-terminal LOKO_RS13795 PF13085 2Fe-2S iron-sulfur cluster binding domain LOKO_RS13800 PF00890 FAD binding domain LOKO_RS13800 PF02910 Fumarate reductase flavoprotein C-term LOKO_RS13805 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LOKO_RS13815 PF00749 tRNA synthetases class I (E and Q), catalytic domain LOKO_RS13845 PF01207 Dihydrouridine synthase (Dus) LOKO_RS13855 PF08361 MAATS-type transcriptional repressor, C-terminal region LOKO_RS13855 PF00440 Bacterial regulatory proteins, tetR family LOKO_RS13860 PF02321 Outer membrane efflux protein LOKO_RS13865 PF00873 AcrB/AcrD/AcrF family LOKO_RS13870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LOKO_RS13885 PF03881 Fructosamine kinase LOKO_RS13890 PF00501 AMP-binding enzyme LOKO_RS13895 PF02469 Fasciclin domain LOKO_RS13900 PF01784 NIF3 (NGG1p interacting factor 3) LOKO_RS13910 PF00293 NUDIX domain LOKO_RS13920 PF00989 PAS fold LOKO_RS13920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOKO_RS13920 PF00512 His Kinase A (phospho-acceptor) domain LOKO_RS13925 PF00072 Response regulator receiver domain LOKO_RS13925 PF00196 Bacterial regulatory proteins, luxR family LOKO_RS13930 PF00487 Fatty acid desaturase LOKO_RS13950 PF03734 L,D-transpeptidase catalytic domain LOKO_RS13950 PF17969 L,D-transpeptidase C-terminal domain LOKO_RS13955 PF13396 Phospholipase_D-nuclease N-terminal LOKO_RS13955 PF13091 PLD-like domain LOKO_RS13960 PF01790 Prolipoprotein diacylglyceryl transferase LOKO_RS13985 PF00403 Heavy-metal-associated domain LOKO_RS14010 PF02540 NAD synthase LOKO_RS14010 PF00117 Glutamine amidotransferase class-I LOKO_RS14010 PF00958 GMP synthase C terminal domain LOKO_RS14015 PF00571 CBS domain LOKO_RS14015 PF00478 IMP dehydrogenase / GMP reductase domain LOKO_RS14020 PF05532 CsbD-like LOKO_RS14030 PF02601 Exonuclease VII, large subunit LOKO_RS14030 PF13742 OB-fold nucleic acid binding domain LOKO_RS14035 PF00072 Response regulator receiver domain LOKO_RS14035 PF00158 Sigma-54 interaction domain LOKO_RS14045 PF00512 His Kinase A (phospho-acceptor) domain LOKO_RS14045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOKO_RS14050 PF00392 Bacterial regulatory proteins, gntR family LOKO_RS14050 PF07729 FCD domain LOKO_RS14060 PF00285 Citrate synthase, C-terminal domain LOKO_RS14065 PF00694 Aconitase C-terminal domain LOKO_RS14065 PF00330 Aconitase family (aconitate hydratase) LOKO_RS14070 PF04303 PrpF protein LOKO_RS14075 PF03972 MmgE/PrpD family LOKO_RS14080 PF03918 Cytochrome C biogenesis protein LOKO_RS14085 PF08534 Redoxin LOKO_RS14090 PF01578 Cytochrome C assembly protein LOKO_RS14090 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LOKO_RS14095 PF03100 CcmE LOKO_RS14105 PF01578 Cytochrome C assembly protein LOKO_RS14110 PF03379 CcmB protein LOKO_RS14115 PF00005 ABC transporter LOKO_RS14120 PF00717 Peptidase S24-like LOKO_RS14120 PF01726 LexA DNA binding domain LOKO_RS14125 PF01205 Uncharacterized protein family UPF0029 LOKO_RS14125 PF09186 Domain of unknown function (DUF1949) LOKO_RS14135 PF02417 Chromate transporter LOKO_RS14140 PF02417 Chromate transporter LOKO_RS14145 PF03401 Tripartite tricarboxylate transporter family receptor LOKO_RS14155 PF01970 Tripartite tricarboxylate transporter TctA family LOKO_RS14170 PF00171 Aldehyde dehydrogenase family LOKO_RS14175 PF03928 Haem-degrading LOKO_RS14180 PF00970 Oxidoreductase FAD-binding domain LOKO_RS14180 PF00175 Oxidoreductase NAD-binding domain LOKO_RS14180 PF00111 2Fe-2S iron-sulfur cluster binding domain LOKO_RS14190 PF03447 Homoserine dehydrogenase, NAD binding domain LOKO_RS14190 PF01958 Domain of unknown function DUF108 LOKO_RS14200 PF00392 Bacterial regulatory proteins, gntR family LOKO_RS14200 PF07729 FCD domain LOKO_RS14215 PF07729 FCD domain LOKO_RS14215 PF00392 Bacterial regulatory proteins, gntR family LOKO_RS14220 PF02417 Chromate transporter LOKO_RS14225 PF02417 Chromate transporter LOKO_RS14240 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit LOKO_RS14245 PF02436 Conserved carboxylase domain LOKO_RS14245 PF00682 HMGL-like LOKO_RS14245 PF00364 Biotin-requiring enzyme LOKO_RS14255 PF01207 Dihydrouridine synthase (Dus) LOKO_RS14275 PF02599 Global regulator protein family LOKO_RS14280 PF13840 ACT domain LOKO_RS14280 PF01842 ACT domain LOKO_RS14280 PF00696 Amino acid kinase family LOKO_RS14285 PF02272 DHHA1 domain LOKO_RS14285 PF01411 tRNA synthetases class II (A) LOKO_RS14285 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LOKO_RS14290 PF00883 Cytosol aminopeptidase family, catalytic domain LOKO_RS14290 PF02789 Cytosol aminopeptidase family, N-terminal domain LOKO_RS14295 PF03739 Lipopolysaccharide export system permease LptF/LptG LOKO_RS14300 PF03739 Lipopolysaccharide export system permease LptF/LptG LOKO_RS14310 PF04324 BFD-like [2Fe-2S] binding domain LOKO_RS14315 PF00210 Ferritin-like domain LOKO_RS14320 PF09084 NMT1/THI5 like LOKO_RS14325 PF00005 ABC transporter LOKO_RS14330 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS14340 PF00899 ThiF family LOKO_RS14345 PF04287 tRNA pseudouridine synthase C LOKO_RS14345 PF00849 RNA pseudouridylate synthase LOKO_RS14350 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LOKO_RS14350 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LOKO_RS14370 PF05188 MutS domain II LOKO_RS14370 PF05192 MutS domain III LOKO_RS14370 PF05190 MutS family domain IV LOKO_RS14370 PF00488 MutS domain V LOKO_RS14370 PF01624 MutS domain I LOKO_RS14380 PF00037 4Fe-4S binding domain LOKO_RS14380 PF11953 Domain of unknown function (DUF3470) LOKO_RS14385 PF03952 Enolase, N-terminal domain LOKO_RS14385 PF00113 Enolase, C-terminal TIM barrel domain LOKO_RS14390 PF00793 DAHP synthetase I family LOKO_RS14395 PF06418 CTP synthase N-terminus LOKO_RS14395 PF00117 Glutamine amidotransferase class-I LOKO_RS14400 PF07992 Pyridine nucleotide-disulphide oxidoreductase LOKO_RS14400 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LOKO_RS14405 PF04898 Glutamate synthase central domain LOKO_RS14405 PF01645 Conserved region in glutamate synthase LOKO_RS14405 PF01493 GXGXG motif LOKO_RS14405 PF00310 Glutamine amidotransferases class-II LOKO_RS14410 PF01761 3-dehydroquinate synthase LOKO_RS14415 PF01202 Shikimate kinase LOKO_RS14420 PF07660 Secretin and TonB N terminus short domain LOKO_RS14420 PF03958 Bacterial type II/III secretion system short domain LOKO_RS14420 PF00263 Bacterial type II and III secretion system protein LOKO_RS14420 PF11741 AMIN domain LOKO_RS14440 PF11104 Type IV pilus assembly protein PilM; LOKO_RS14445 PF17092 Penicillin-binding protein OB-like domain LOKO_RS14445 PF00905 Penicillin binding protein transpeptidase domain LOKO_RS14445 PF00912 Transglycosylase LOKO_RS14455 PF00390 Malic enzyme, N-terminal domain LOKO_RS14455 PF03949 Malic enzyme, NAD binding domain LOKO_RS14460 PF01197 Ribosomal protein L31 LOKO_RS14465 PF00270 DEAD/DEAH box helicase LOKO_RS14465 PF00271 Helicase conserved C-terminal domain LOKO_RS14465 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LOKO_RS14465 PF18074 Primosomal protein N C-terminal domain LOKO_RS14465 PF17764 3′ DNA-binding domain (3′BD) LOKO_RS14470 PF00750 tRNA synthetases class I (R) LOKO_RS14470 PF03485 Arginyl tRNA synthetase N terminal domain LOKO_RS14470 PF05746 DALR anticodon binding domain LOKO_RS14480 PF00227 Proteasome subunit LOKO_RS14485 PF07724 AAA domain (Cdc48 subfamily) LOKO_RS14485 PF00004 ATPase family associated with various cellular activities (AAA) LOKO_RS14485 PF10431 C-terminal, D2-small domain, of ClpB protein LOKO_RS14495 PF01209 ubiE/COQ5 methyltransferase family LOKO_RS14505 PF03109 ABC1 family LOKO_RS14510 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LOKO_RS14515 PF02416 mttA/Hcf106 family LOKO_RS14520 PF02416 mttA/Hcf106 family LOKO_RS14525 PF00902 Sec-independent protein translocase protein (TatC) LOKO_RS14535 PF00490 Delta-aminolevulinic acid dehydratase LOKO_RS14545 PF00793 DAHP synthetase I family LOKO_RS14555 PF00111 2Fe-2S iron-sulfur cluster binding domain LOKO_RS14555 PF00175 Oxidoreductase NAD-binding domain LOKO_RS14555 PF00970 Oxidoreductase FAD-binding domain LOKO_RS14560 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LOKO_RS14565 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LOKO_RS14565 PF07498 Rho termination factor, N-terminal domain LOKO_RS14565 PF07497 Rho termination factor, RNA-binding domain LOKO_RS14570 PF02541 Ppx/GppA phosphatase family LOKO_RS14575 PF11734 TilS substrate C-terminal domain LOKO_RS14575 PF09179 TilS substrate binding domain LOKO_RS14575 PF01171 PP-loop family LOKO_RS14580 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LOKO_RS14585 PF14579 Helix-hairpin-helix motif LOKO_RS14585 PF07733 Bacterial DNA polymerase III alpha NTPase domain LOKO_RS14585 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LOKO_RS14585 PF01336 OB-fold nucleic acid binding domain LOKO_RS14585 PF02811 PHP domain LOKO_RS14590 PF01351 Ribonuclease HII LOKO_RS14595 PF02684 Lipid-A-disaccharide synthetase LOKO_RS14600 PF00132 Bacterial transferase hexapeptide (six repeats) LOKO_RS14600 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LOKO_RS14605 PF07977 FabA-like domain LOKO_RS14610 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LOKO_RS14610 PF00132 Bacterial transferase hexapeptide (six repeats) LOKO_RS14620 PF07244 Surface antigen variable number repeat LOKO_RS14620 PF01103 Surface antigen LOKO_RS14625 PF17820 PDZ domain LOKO_RS14625 PF13180 PDZ domain LOKO_RS14625 PF02163 Peptidase family M50 LOKO_RS14630 PF13288 DXP reductoisomerase C-terminal domain LOKO_RS14630 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LOKO_RS14630 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LOKO_RS14640 PF01255 Putative undecaprenyl diphosphate synthase LOKO_RS14645 PF01765 Ribosome recycling factor LOKO_RS14650 PF00696 Amino acid kinase family LOKO_RS14655 PF00889 Elongation factor TS LOKO_RS14660 PF00318 Ribosomal protein S2 LOKO_RS14665 PF00557 Metallopeptidase family M24 LOKO_RS14670 PF01842 ACT domain LOKO_RS14670 PF01966 HD domain LOKO_RS14670 PF01909 Nucleotidyltransferase domain LOKO_RS14670 PF08335 GlnD PII-uridylyltransferase LOKO_RS14675 PF00155 Aminotransferase class I and II LOKO_RS14685 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle LOKO_RS14685 PF14602 Hexapeptide repeat of succinyl-transferase LOKO_RS14690 PF01546 Peptidase family M20/M25/M40 LOKO_RS14690 PF07687 Peptidase dimerisation domain LOKO_RS14700 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LOKO_RS14710 PF00313 'Cold-shock' DNA-binding domain LOKO_RS14720 PF07992 Pyridine nucleotide-disulphide oxidoreductase LOKO_RS14730 PF00330 Aconitase family (aconitate hydratase) LOKO_RS14730 PF00694 Aconitase C-terminal domain LOKO_RS14735 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS14735 PF03707 Bacterial signalling protein N terminal repeat LOKO_RS14735 PF00563 EAL domain LOKO_RS14740 PF00390 Malic enzyme, N-terminal domain LOKO_RS14740 PF03949 Malic enzyme, NAD binding domain LOKO_RS14750 PF00579 tRNA synthetases class I (W and Y) LOKO_RS14755 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LOKO_RS14755 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LOKO_RS14770 PF10672 S-adenosylmethionine-dependent methyltransferase LOKO_RS14770 PF17785 PUA-like domain LOKO_RS14775 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LOKO_RS14775 PF06827 Zinc finger found in FPG and IleRS LOKO_RS14775 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LOKO_RS14780 PF00471 Ribosomal protein L33 LOKO_RS14785 PF00830 Ribosomal L28 family LOKO_RS14795 PF04002 RadC-like JAB domain LOKO_RS14800 PF02441 Flavoprotein LOKO_RS14800 PF04127 DNA / pantothenate metabolism flavoprotein LOKO_RS14805 PF00692 dUTPase LOKO_RS14810 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LOKO_RS14810 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LOKO_RS14810 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LOKO_RS14810 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LOKO_RS14815 PF00696 Amino acid kinase family LOKO_RS14820 PF00440 Bacterial regulatory proteins, tetR family LOKO_RS14825 PF00140 Sigma-70 factor, region 1.2 LOKO_RS14825 PF04545 Sigma-70, region 4 LOKO_RS14825 PF04542 Sigma-70 region 2 LOKO_RS14830 PF18075 FtsX extracellular domain LOKO_RS14835 PF00005 ABC transporter LOKO_RS14840 PF02881 SRP54-type protein, helical bundle domain LOKO_RS14840 PF00448 SRP54-type protein, GTPase domain LOKO_RS14850 PF06005 Cell division protein ZapB LOKO_RS14855 PF00583 Acetyltransferase (GNAT) family LOKO_RS14865 PF01722 BolA-like protein LOKO_RS14870 PF07690 Major Facilitator Superfamily LOKO_RS14880 PF00152 tRNA synthetases class II (D, K and N) LOKO_RS14885 PF00472 RF-1 domain LOKO_RS14885 PF03462 PCRF domain LOKO_RS14890 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LOKO_RS14895 PF00376 MerR family regulatory protein LOKO_RS14895 PF09278 MerR, DNA binding LOKO_RS14900 PF00403 Heavy-metal-associated domain LOKO_RS14910 PF01979 Amidohydrolase family LOKO_RS14920 PF02540 NAD synthase LOKO_RS14920 PF00117 Glutamine amidotransferase class-I LOKO_RS14920 PF00958 GMP synthase C terminal domain LOKO_RS14925 PF00465 Iron-containing alcohol dehydrogenase LOKO_RS14930 PF00171 Aldehyde dehydrogenase family LOKO_RS14935 PF00120 Glutamine synthetase, catalytic domain LOKO_RS14945 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LOKO_RS14960 PF00732 GMC oxidoreductase LOKO_RS14960 PF05199 GMC oxidoreductase LOKO_RS14965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LOKO_RS14965 PF02770 Acyl-CoA dehydrogenase, middle domain LOKO_RS14965 PF09317 Domain of unknown function (DUF1974) LOKO_RS14965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LOKO_RS14970 PF03600 Citrate transporter LOKO_RS14970 PF02080 TrkA-C domain LOKO_RS14975 PF00378 Enoyl-CoA hydratase/isomerase LOKO_RS14980 PF13380 CoA binding domain LOKO_RS14980 PF13607 Succinyl-CoA ligase like flavodoxin domain LOKO_RS14985 PF00378 Enoyl-CoA hydratase/isomerase LOKO_RS14990 PF01418 Helix-turn-helix domain, rpiR family LOKO_RS14990 PF01380 SIS domain LOKO_RS14995 PF08240 Alcohol dehydrogenase GroES-like domain LOKO_RS14995 PF00107 Zinc-binding dehydrogenase LOKO_RS15005 PF03009 Glycerophosphoryl diester phosphodiesterase family LOKO_RS15010 PF02540 NAD synthase LOKO_RS15020 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LOKO_RS15020 PF07685 CobB/CobQ-like glutamine amidotransferase domain LOKO_RS15025 PF12557 Cob(I)alamin adenosyltransferase N terminal LOKO_RS15025 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP LOKO_RS15030 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LOKO_RS15030 PF07685 CobB/CobQ-like glutamine amidotransferase domain LOKO_RS15035 PF00005 ABC transporter LOKO_RS15040 PF01032 FecCD transport family LOKO_RS15045 PF01497 Periplasmic binding protein LOKO_RS15055 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LOKO_RS15055 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LOKO_RS15060 PF00285 Citrate synthase, C-terminal domain LOKO_RS15065 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LOKO_RS15070 PF01063 Amino-transferase class IV LOKO_RS15080 PF08264 Anticodon-binding domain of tRNA LOKO_RS15080 PF00133 tRNA synthetases class I (I, L, M and V) LOKO_RS15080 PF10458 Valyl tRNA synthetase tRNA binding arm LOKO_RS15085 PF02954 Bacterial regulatory protein, Fis family LOKO_RS15085 PF13185 GAF domain LOKO_RS15085 PF00158 Sigma-54 interaction domain LOKO_RS15090 PF01728 FtsJ-like methyltransferase LOKO_RS15090 PF18125 RlmM ferredoxin-like domain LOKO_RS15100 PF01206 Sulfurtransferase TusA LOKO_RS15115 PF01554 MatE LOKO_RS15120 PF04315 Elongation factor P hydroxylase LOKO_RS15125 PF03466 LysR substrate binding domain LOKO_RS15125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOKO_RS15130 PF02780 Transketolase, C-terminal domain LOKO_RS15130 PF02779 Transketolase, pyrimidine binding domain LOKO_RS15145 PF01026 TatD related DNase LOKO_RS15150 PF00005 ABC transporter LOKO_RS15150 PF16326 ABC transporter C-terminal domain LOKO_RS15150 PF12848 ABC transporter LOKO_RS15155 PF00582 Universal stress protein family LOKO_RS15165 PF01047 MarR family LOKO_RS15175 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LOKO_RS15175 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LOKO_RS15175 PF00378 Enoyl-CoA hydratase/isomerase LOKO_RS15180 PF02803 Thiolase, C-terminal domain LOKO_RS15180 PF00108 Thiolase, N-terminal domain LOKO_RS15195 PF01161 Phosphatidylethanolamine-binding protein LOKO_RS15200 PF05721 Phytanoyl-CoA dioxygenase (PhyH) LOKO_RS15210 PF15887 Putative zinc-binding metallo-peptidase LOKO_RS15210 PF10005 zinc-ribbon domain LOKO_RS15220 PF02558 Ketopantoate reductase PanE/ApbA LOKO_RS15220 PF08546 Ketopantoate reductase PanE/ApbA C terminal LOKO_RS15225 PF03705 CheR methyltransferase, all-alpha domain LOKO_RS15225 PF01739 CheR methyltransferase, SAM binding domain LOKO_RS15225 PF08448 PAS fold LOKO_RS15225 PF01339 CheB methylesterase LOKO_RS15230 PF00196 Bacterial regulatory proteins, luxR family LOKO_RS15230 PF00072 Response regulator receiver domain LOKO_RS15235 PF12849 PBP superfamily domain LOKO_RS15240 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS15245 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS15250 PF00005 ABC transporter LOKO_RS15255 PF01895 PhoU domain LOKO_RS15260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOKO_RS15260 PF00512 His Kinase A (phospho-acceptor) domain LOKO_RS15260 PF00989 PAS fold LOKO_RS15260 PF11808 Phosphate regulon sensor protein PhoR LOKO_RS15265 PF00072 Response regulator receiver domain LOKO_RS15265 PF00486 Transcriptional regulatory protein, C terminal LOKO_RS15270 PF00005 ABC transporter LOKO_RS15275 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS15280 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS15285 PF12849 PBP superfamily domain LOKO_RS15295 PF03358 NADPH-dependent FMN reductase LOKO_RS15300 PF14437 MafB19-like deaminase LOKO_RS15305 PF02690 Na+/Pi-cotransporter LOKO_RS15320 PF01037 Lrp/AsnC ligand binding domain LOKO_RS15335 PF01458 Uncharacterized protein family (UPF0051) LOKO_RS15340 PF00005 ABC transporter LOKO_RS15345 PF01458 Uncharacterized protein family (UPF0051) LOKO_RS15350 PF00266 Aminotransferase class-V LOKO_RS15355 PF01883 Iron-sulfur cluster assembly protein LOKO_RS15360 PF02698 DUF218 domain LOKO_RS15370 PF18030 RimK PreATP-grasp domain LOKO_RS15370 PF08443 RimK-like ATP-grasp domain LOKO_RS15375 PF18030 RimK PreATP-grasp domain LOKO_RS15375 PF08443 RimK-like ATP-grasp domain LOKO_RS15385 PF04287 tRNA pseudouridine synthase C LOKO_RS15410 PF00474 Sodium:solute symporter family LOKO_RS15415 PF14850 DNA-binding domain of Proline dehydrogenase LOKO_RS15415 PF00171 Aldehyde dehydrogenase family LOKO_RS15415 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LOKO_RS15415 PF01619 Proline dehydrogenase LOKO_RS15420 PF12833 Helix-turn-helix domain LOKO_RS15435 PF00571 CBS domain LOKO_RS15435 PF01743 Poly A polymerase head domain LOKO_RS15440 PF01679 Proteolipid membrane potential modulator LOKO_RS15450 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LOKO_RS15450 PF01266 FAD dependent oxidoreductase LOKO_RS15455 PF00892 EamA-like transporter family LOKO_RS15460 PF01513 ATP-NAD kinase LOKO_RS15470 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease LOKO_RS15470 PF01694 Rhomboid family LOKO_RS15495 PF00403 Heavy-metal-associated domain LOKO_RS15500 PF02277 Phosphoribosyltransferase LOKO_RS15505 PF03186 CobD/Cbib protein LOKO_RS15510 PF00155 Aminotransferase class I and II LOKO_RS15515 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase LOKO_RS15520 PF02654 Cobalamin-5-phosphate synthase LOKO_RS15525 PF00300 Histidine phosphatase superfamily (branch 1) LOKO_RS15535 PF07715 TonB-dependent Receptor Plug Domain LOKO_RS15535 PF00593 TonB dependent receptor LOKO_RS15540 PF08666 SAF domain LOKO_RS15540 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus LOKO_RS15545 PF07729 FCD domain LOKO_RS15545 PF00392 Bacterial regulatory proteins, gntR family LOKO_RS15550 PF02615 Malate/L-lactate dehydrogenase LOKO_RS15555 PF13378 Enolase C-terminal domain-like LOKO_RS15555 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LOKO_RS15560 PF01565 FAD binding domain LOKO_RS15560 PF02913 FAD linked oxidases, C-terminal domain LOKO_RS15565 PF03328 HpcH/HpaI aldolase/citrate lyase family LOKO_RS15570 PF13378 Enolase C-terminal domain-like LOKO_RS15570 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LOKO_RS15575 PF05035 2-keto-3-deoxy-galactonokinase LOKO_RS15580 PF01081 KDPG and KHG aldolase LOKO_RS15585 PF02801 Beta-ketoacyl synthase, C-terminal domain LOKO_RS15585 PF00109 Beta-ketoacyl synthase, N-terminal domain LOKO_RS15590 PF01467 Cytidylyltransferase-like LOKO_RS15595 PF00037 4Fe-4S binding domain LOKO_RS15605 PF01554 MatE LOKO_RS15610 PF02667 Short chain fatty acid transporter LOKO_RS15615 PF03061 Thioesterase superfamily LOKO_RS15635 PF08085 Entericidin EcnA/B family LOKO_RS15665 PF00210 Ferritin-like domain LOKO_RS15670 PF07687 Peptidase dimerisation domain LOKO_RS15670 PF01546 Peptidase family M20/M25/M40 LOKO_RS15680 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LOKO_RS15685 PF01547 Bacterial extracellular solute-binding protein LOKO_RS15690 PF02887 Pyruvate kinase, alpha/beta domain LOKO_RS15690 PF00224 Pyruvate kinase, barrel domain LOKO_RS15705 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain LOKO_RS15705 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain LOKO_RS15715 PF07804 HipA-like C-terminal domain LOKO_RS15715 PF13657 HipA N-terminal domain LOKO_RS15720 PF01381 Helix-turn-helix LOKO_RS15725 PF01266 FAD dependent oxidoreductase LOKO_RS15735 PF01810 LysE type translocator LOKO_RS15745 PF00313 'Cold-shock' DNA-binding domain LOKO_RS15750 PF02492 CobW/HypB/UreG, nucleotide-binding domain LOKO_RS15750 PF07683 Cobalamin synthesis protein cobW C-terminal domain LOKO_RS15755 PF02664 S-Ribosylhomocysteinase (LuxS) LOKO_RS15790 PF02798 Glutathione S-transferase, N-terminal domain LOKO_RS15800 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS15805 PF03330 Lytic transglycolase LOKO_RS15820 PF16884 N-terminal domain of oxidoreductase LOKO_RS15820 PF00107 Zinc-binding dehydrogenase LOKO_RS15825 PF03466 LysR substrate binding domain LOKO_RS15825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOKO_RS15830 PF01810 LysE type translocator LOKO_RS15840 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS15840 PF17158 Membrane-associated sensor, integral membrane domain LOKO_RS15845 PF00271 Helicase conserved C-terminal domain LOKO_RS15845 PF00270 DEAD/DEAH box helicase LOKO_RS15845 PF03880 DbpA RNA binding domain LOKO_RS15860 PF03707 Bacterial signalling protein N terminal repeat LOKO_RS15860 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS15860 PF00563 EAL domain LOKO_RS15875 PF02633 Creatinine amidohydrolase LOKO_RS15880 PF00004 ATPase family associated with various cellular activities (AAA) LOKO_RS15880 PF17862 AAA+ lid domain LOKO_RS15880 PF06480 FtsH Extracellular LOKO_RS15880 PF01434 Peptidase family M41 LOKO_RS15885 PF12146 Serine aminopeptidase, S33 LOKO_RS15890 PF01709 Transcriptional regulator LOKO_RS15895 PF01321 Creatinase/Prolidase N-terminal domain LOKO_RS15895 PF00557 Metallopeptidase family M24 LOKO_RS15915 PF00376 MerR family regulatory protein LOKO_RS15915 PF09278 MerR, DNA binding LOKO_RS15920 PF00005 ABC transporter LOKO_RS15920 PF00664 ABC transporter transmembrane region LOKO_RS15930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LOKO_RS15930 PF00672 HAMP domain LOKO_RS15930 PF02203 Tar ligand binding domain homologue LOKO_RS15945 PF08240 Alcohol dehydrogenase GroES-like domain LOKO_RS15945 PF00107 Zinc-binding dehydrogenase LOKO_RS15955 PF01177 Asp/Glu/Hydantoin racemase LOKO_RS15960 PF00873 AcrB/AcrD/AcrF family LOKO_RS15965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LOKO_RS15970 PF03401 Tripartite tricarboxylate transporter family receptor LOKO_RS15995 PF00263 Bacterial type II and III secretion system protein LOKO_RS15995 PF13629 Pilus formation protein N terminal region LOKO_RS15995 PF04972 BON domain LOKO_RS16010 PF00437 Type II/IV secretion system protein LOKO_RS16080 PF00400 WD domain, G-beta repeat LOKO_RS16080 PF12894 Anaphase-promoting complex subunit 4 WD40 domain LOKO_RS16100 PF06798 PrkA serine protein kinase C-terminal domain LOKO_RS16100 PF08298 PrkA AAA domain LOKO_RS16105 PF04285 Protein of unknown function (DUF444) LOKO_RS16110 PF04293 SpoVR like protein LOKO_RS16115 PF01355 High potential iron-sulfur protein LOKO_RS16120 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LOKO_RS16120 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LOKO_RS16135 PF00291 Pyridoxal-phosphate dependent enzyme LOKO_RS16135 PF14821 Threonine synthase N terminus LOKO_RS16140 PF01842 ACT domain LOKO_RS16140 PF00742 Homoserine dehydrogenase LOKO_RS16140 PF03447 Homoserine dehydrogenase, NAD binding domain LOKO_RS16145 PF10411 Disulfide bond isomerase protein N-terminus LOKO_RS16145 PF13098 Thioredoxin-like domain LOKO_RS16150 PF02899 Phage integrase, N-terminal SAM-like domain LOKO_RS16150 PF00589 Phage integrase family LOKO_RS16155 PF01245 Ribosomal protein L19 LOKO_RS16160 PF01746 tRNA (Guanine-1)-methyltransferase LOKO_RS16165 PF05239 PRC-barrel domain LOKO_RS16165 PF01782 RimM N-terminal domain LOKO_RS16170 PF00886 Ribosomal protein S16 LOKO_RS16175 PF00448 SRP54-type protein, GTPase domain LOKO_RS16175 PF02881 SRP54-type protein, helical bundle domain LOKO_RS16175 PF02978 Signal peptide binding domain LOKO_RS16185 PF01595 Cyclin M transmembrane N-terminal domain LOKO_RS16185 PF03471 Transporter associated domain LOKO_RS16185 PF00571 CBS domain LOKO_RS16205 PF16187 Middle or third domain of peptidase_M16 LOKO_RS16205 PF05193 Peptidase M16 inactive domain LOKO_RS16205 PF00675 Insulinase (Peptidase family M16) LOKO_RS16210 PF08411 Exonuclease C-terminal LOKO_RS16210 PF00929 Exonuclease LOKO_RS16215 PF03776 Septum formation topological specificity factor MinE LOKO_RS16220 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LOKO_RS16225 PF03775 Septum formation inhibitor MinC, C-terminal domain LOKO_RS16225 PF05209 Septum formation inhibitor MinC, N-terminal domain LOKO_RS16235 PF00106 short chain dehydrogenase LOKO_RS16260 PF00092 von Willebrand factor type A domain LOKO_RS16270 PF13673 Acetyltransferase (GNAT) domain LOKO_RS16270 PF13302 Acetyltransferase (GNAT) domain LOKO_RS16270 PF03352 Methyladenine glycosylase LOKO_RS16270 PF00117 Glutamine amidotransferase class-I LOKO_RS16270 PF00958 GMP synthase C terminal domain LOKO_RS16275 PF04307 LexA-binding, inner membrane-associated putative hydrolase LOKO_RS16280 PF02525 Flavodoxin-like fold LOKO_RS16285 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LOKO_RS16285 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LOKO_RS16295 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LOKO_RS16305 PF01368 DHH family LOKO_RS16305 PF17768 RecJ OB domain LOKO_RS16305 PF02272 DHHA1 domain LOKO_RS16310 PF14821 Threonine synthase N terminus LOKO_RS16310 PF00291 Pyridoxal-phosphate dependent enzyme LOKO_RS16315 PF01040 UbiA prenyltransferase family LOKO_RS16320 PF02628 Cytochrome oxidase assembly protein LOKO_RS16340 PF00510 Cytochrome c oxidase subunit III LOKO_RS16345 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 LOKO_RS16350 PF00115 Cytochrome C and Quinol oxidase polypeptide I LOKO_RS16355 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LOKO_RS16355 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LOKO_RS16365 PF04172 LrgB-like family LOKO_RS16370 PF03788 LrgA family LOKO_RS16375 PF02028 BCCT, betaine/carnitine/choline family transporter LOKO_RS16385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LOKO_RS16385 PF00672 HAMP domain LOKO_RS16400 PF04488 Glycosyltransferase sugar-binding region containing DXD motif LOKO_RS16455 PF08267 Cobalamin-independent synthase, N-terminal domain LOKO_RS16455 PF01717 Cobalamin-independent synthase, Catalytic domain LOKO_RS16460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOKO_RS16460 PF03466 LysR substrate binding domain LOKO_RS16465 PF00672 HAMP domain LOKO_RS16465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOKO_RS16465 PF00512 His Kinase A (phospho-acceptor) domain LOKO_RS16470 PF00072 Response regulator receiver domain LOKO_RS16470 PF00486 Transcriptional regulatory protein, C terminal LOKO_RS16475 PF03477 ATP cone domain LOKO_RS16475 PF02867 Ribonucleotide reductase, barrel domain LOKO_RS16475 PF00317 Ribonucleotide reductase, all-alpha domain LOKO_RS16480 PF00268 Ribonucleotide reductase, small chain LOKO_RS16500 PF02401 LytB protein LOKO_RS16510 PF00067 Cytochrome P450 LOKO_RS16515 PF00072 Response regulator receiver domain LOKO_RS16515 PF00486 Transcriptional regulatory protein, C terminal LOKO_RS16525 PF01467 Cytidylyltransferase-like LOKO_RS16560 PF03575 Peptidase family S51 LOKO_RS16565 PF08245 Mur ligase middle domain LOKO_RS16565 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LOKO_RS16565 PF02875 Mur ligase family, glutamate ligase domain LOKO_RS16570 PF17176 tRNA-binding domain LOKO_RS16570 PF08351 Domain of unknown function (DUF1726) LOKO_RS16570 PF13718 GNAT acetyltransferase 2 LOKO_RS16570 PF05127 Helicase LOKO_RS16575 PF03480 Bacterial extracellular solute-binding protein, family 7 LOKO_RS16585 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LOKO_RS16595 PF01569 PAP2 superfamily LOKO_RS16605 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LOKO_RS16615 PF00356 Bacterial regulatory proteins, lacI family LOKO_RS16620 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LOKO_RS16620 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LOKO_RS16625 PF00815 Histidinol dehydrogenase LOKO_RS16635 PF03480 Bacterial extracellular solute-binding protein, family 7 LOKO_RS16645 PF13193 AMP-binding enzyme C-terminal domain LOKO_RS16645 PF00501 AMP-binding enzyme LOKO_RS16650 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LOKO_RS16650 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LOKO_RS16660 PF00196 Bacterial regulatory proteins, luxR family LOKO_RS16660 PF00072 Response regulator receiver domain LOKO_RS16665 PF03480 Bacterial extracellular solute-binding protein, family 7 LOKO_RS16675 PF00155 Aminotransferase class I and II LOKO_RS16690 PF01479 S4 domain LOKO_RS16690 PF00579 tRNA synthetases class I (W and Y) LOKO_RS16695 PF03702 Anhydro-N-acetylmuramic acid kinase LOKO_RS16700 PF00437 Type II/IV secretion system protein LOKO_RS16705 PF00437 Type II/IV secretion system protein LOKO_RS16710 PF01168 Alanine racemase, N-terminal domain LOKO_RS16715 PF03807 NADP oxidoreductase coenzyme F420-dependent LOKO_RS16715 PF14748 Pyrroline-5-carboxylate reductase dimerisation LOKO_RS16720 PF02325 YGGT family LOKO_RS16725 PF00561 alpha/beta hydrolase fold LOKO_RS16745 PF17746 SfsA N-terminal OB domain LOKO_RS16745 PF03749 Sugar fermentation stimulation protein RE domain LOKO_RS16750 PF00155 Aminotransferase class I and II LOKO_RS16755 PF01258 Prokaryotic dksA/traR C4-type zinc finger LOKO_RS16760 PF00749 tRNA synthetases class I (E and Q), catalytic domain LOKO_RS16765 PF00512 His Kinase A (phospho-acceptor) domain LOKO_RS16765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOKO_RS16770 PF02954 Bacterial regulatory protein, Fis family LOKO_RS16770 PF00158 Sigma-54 interaction domain LOKO_RS16770 PF00072 Response regulator receiver domain LOKO_RS16775 PF12626 Polymerase A arginine-rich C-terminus LOKO_RS16775 PF12627 Probable RNA and SrmB- binding site of polymerase A LOKO_RS16775 PF01743 Poly A polymerase head domain LOKO_RS16780 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LOKO_RS16785 PF02548 Ketopantoate hydroxymethyltransferase LOKO_RS16790 PF02569 Pantoate-beta-alanine ligase LOKO_RS16795 PF02261 Aspartate decarboxylase LOKO_RS16800 PF00108 Thiolase, N-terminal domain LOKO_RS16800 PF02803 Thiolase, C-terminal domain LOKO_RS16805 PF01138 3' exoribonuclease family, domain 1 LOKO_RS16805 PF00013 KH domain LOKO_RS16805 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LOKO_RS16805 PF00575 S1 RNA binding domain LOKO_RS16805 PF03725 3' exoribonuclease family, domain 2 LOKO_RS16810 PF00312 Ribosomal protein S15 LOKO_RS16815 PF09157 Pseudouridine synthase II TruB, C-terminal LOKO_RS16815 PF01509 TruB family pseudouridylate synthase (N terminal domain) LOKO_RS16815 PF16198 tRNA pseudouridylate synthase B C-terminal domain LOKO_RS16820 PF02033 Ribosome-binding factor A LOKO_RS16825 PF08364 Bacterial translation initiation factor IF-2 associated region LOKO_RS16825 PF04760 Translation initiation factor IF-2, N-terminal region LOKO_RS16825 PF11987 Translation-initiation factor 2 LOKO_RS16825 PF00009 Elongation factor Tu GTP binding domain LOKO_RS16830 PF00575 S1 RNA binding domain LOKO_RS16830 PF13184 NusA-like KH domain LOKO_RS16830 PF08529 NusA N-terminal domain LOKO_RS16835 PF02576 RimP N-terminal domain LOKO_RS16835 PF17384 RimP C-terminal SH3 domain LOKO_RS16850 PF03840 Preprotein translocase SecG subunit LOKO_RS16855 PF00121 Triosephosphate isomerase LOKO_RS16860 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LOKO_RS16860 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LOKO_RS16860 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LOKO_RS16860 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LOKO_RS16865 PF00809 Pterin binding enzyme LOKO_RS16870 PF01434 Peptidase family M41 LOKO_RS16870 PF06480 FtsH Extracellular LOKO_RS16870 PF17862 AAA+ lid domain LOKO_RS16870 PF00004 ATPase family associated with various cellular activities (AAA) LOKO_RS16875 PF01728 FtsJ-like methyltransferase LOKO_RS16880 PF01985 CRS1 / YhbY (CRM) domain LOKO_RS16885 PF03449 Transcription elongation factor, N-terminal LOKO_RS16885 PF01272 Transcription elongation factor, GreA/GreB, C-term LOKO_RS16890 PF02142 MGS-like domain LOKO_RS16890 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LOKO_RS16890 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LOKO_RS16895 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LOKO_RS16895 PF00117 Glutamine amidotransferase class-I LOKO_RS16900 PF05173 Dihydrodipicolinate reductase, C-terminus LOKO_RS16900 PF01113 Dihydrodipicolinate reductase, N-terminus LOKO_RS16905 PF01381 Helix-turn-helix LOKO_RS16910 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB LOKO_RS16930 PF01556 DnaJ C terminal domain LOKO_RS16930 PF00684 DnaJ central domain LOKO_RS16930 PF00226 DnaJ domain LOKO_RS16935 PF00012 Hsp70 protein LOKO_RS16940 PF01025 GrpE LOKO_RS16945 PF02463 RecF/RecN/SMC N terminal domain LOKO_RS16950 PF01475 Ferric uptake regulator family LOKO_RS16955 PF04355 SmpA / OmlA family LOKO_RS16960 PF03658 RnfH family Ubiquitin LOKO_RS16965 PF03364 Polyketide cyclase / dehydrase and lipid transport LOKO_RS16970 PF01668 SmpB protein LOKO_RS16980 PF13356 Arm DNA-binding domain LOKO_RS16980 PF00589 Phage integrase family LOKO_RS17020 PF02384 N-6 DNA Methylase LOKO_RS17050 PF05343 M42 glutamyl aminopeptidase LOKO_RS17060 PF16653 Saccharopine dehydrogenase C-terminal domain LOKO_RS17060 PF03435 Saccharopine dehydrogenase NADP binding domain LOKO_RS17065 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LOKO_RS17070 PF00696 Amino acid kinase family LOKO_RS17070 PF01842 ACT domain LOKO_RS17080 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LOKO_RS17080 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LOKO_RS17085 PF02887 Pyruvate kinase, alpha/beta domain LOKO_RS17085 PF00224 Pyruvate kinase, barrel domain LOKO_RS17090 PF01975 Survival protein SurE LOKO_RS17095 PF01142 tRNA pseudouridine synthase D (TruD) LOKO_RS17100 PF02542 YgbB family LOKO_RS17105 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LOKO_RS17110 PF04977 Septum formation initiator LOKO_RS17120 PF00171 Aldehyde dehydrogenase family LOKO_RS17125 PF00920 Dehydratase family LOKO_RS17130 PF02685 Glucokinase LOKO_RS17135 PF01263 Aldose 1-epimerase LOKO_RS17140 PF00294 pfkB family carbohydrate kinase LOKO_RS17145 PF08447 PAS fold LOKO_RS17145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LOKO_RS17150 PF02142 MGS-like domain LOKO_RS17155 PF00342 Phosphoglucose isomerase LOKO_RS17160 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LOKO_RS17165 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LOKO_RS17170 PF00924 Mechanosensitive ion channel LOKO_RS17185 PF02602 Uroporphyrinogen-III synthase HemD LOKO_RS17190 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LOKO_RS17190 PF03900 Porphobilinogen deaminase, C-terminal domain LOKO_RS17195 PF00206 Lyase LOKO_RS17195 PF14698 Argininosuccinate lyase C-terminal LOKO_RS17200 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LOKO_RS17200 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LOKO_RS17205 PF01678 Diaminopimelate epimerase LOKO_RS17215 PF00589 Phage integrase family LOKO_RS17215 PF02899 Phage integrase, N-terminal SAM-like domain LOKO_RS17220 PF13419 Haloacid dehalogenase-like hydrolase LOKO_RS17225 PF01926 50S ribosome-binding GTPase LOKO_RS17230 PF00034 Cytochrome c LOKO_RS17235 PF01323 DSBA-like thioredoxin domain LOKO_RS17250 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LOKO_RS17255 PF09335 SNARE associated Golgi protein LOKO_RS17260 PF08543 Phosphomethylpyrimidine kinase LOKO_RS17270 PF02580 D-Tyr-tRNA(Tyr) deacylase LOKO_RS17275 PF12848 ABC transporter LOKO_RS17275 PF00005 ABC transporter LOKO_RS17285 PF03480 Bacterial extracellular solute-binding protein, family 7 LOKO_RS17290 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LOKO_RS17295 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LOKO_RS17300 PF00582 Universal stress protein family LOKO_RS17305 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LOKO_RS17305 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LOKO_RS17315 PF02630 SCO1/SenC LOKO_RS17330 PF02371 Transposase IS116/IS110/IS902 family LOKO_RS17330 PF01548 Transposase LOKO_RS17335 PF03466 LysR substrate binding domain LOKO_RS17335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOKO_RS17345 PF02390 Putative methyltransferase LOKO_RS17350 PF05690 Thiazole biosynthesis protein ThiG LOKO_RS17355 PF02597 ThiS family LOKO_RS17355 PF05690 Thiazole biosynthesis protein ThiG LOKO_RS17360 PF04241 Protein of unknown function (DUF423) LOKO_RS17370 PF01274 Malate synthase LOKO_RS17385 PF13335 Magnesium chelatase, subunit ChlI C-terminal LOKO_RS17385 PF01078 Magnesium chelatase, subunit ChlI LOKO_RS17390 PF04380 Membrane fusogenic activity LOKO_RS17395 PF00543 Nitrogen regulatory protein P-II LOKO_RS17400 PF00909 Ammonium Transporter Family LOKO_RS17405 PF00543 Nitrogen regulatory protein P-II LOKO_RS17410 PF00970 Oxidoreductase FAD-binding domain LOKO_RS17410 PF00175 Oxidoreductase NAD-binding domain LOKO_RS17415 PF03466 LysR substrate binding domain LOKO_RS17415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOKO_RS17420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LOKO_RS17420 PF02203 Tar ligand binding domain homologue LOKO_RS17420 PF00672 HAMP domain LOKO_RS17425 PF10116 Protein required for attachment to host cells LOKO_RS17430 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS17435 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS17440 PF00005 ABC transporter LOKO_RS17450 PF00300 Histidine phosphatase superfamily (branch 1) LOKO_RS17460 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS17465 PF00005 ABC transporter LOKO_RS17470 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS17475 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS17480 PF00497 Bacterial extracellular solute-binding proteins, family 3 LOKO_RS17485 PF00497 Bacterial extracellular solute-binding proteins, family 3 LOKO_RS17490 PF13192 Thioredoxin domain LOKO_RS17490 PF07992 Pyridine nucleotide-disulphide oxidoreductase LOKO_RS17495 PF10417 C-terminal domain of 1-Cys peroxiredoxin LOKO_RS17495 PF00578 AhpC/TSA family LOKO_RS17520 PF01212 Beta-eliminating lyase LOKO_RS17525 PF01565 FAD binding domain LOKO_RS17525 PF13183 4Fe-4S dicluster domain LOKO_RS17525 PF02913 FAD linked oxidases, C-terminal domain LOKO_RS17530 PF00266 Aminotransferase class-V LOKO_RS17535 PF02515 CoA-transferase family III LOKO_RS17540 PF00378 Enoyl-CoA hydratase/isomerase LOKO_RS17545 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LOKO_RS17545 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LOKO_RS17555 PF03480 Bacterial extracellular solute-binding protein, family 7 LOKO_RS17565 PF00392 Bacterial regulatory proteins, gntR family LOKO_RS17565 PF07729 FCD domain LOKO_RS17570 PF00392 Bacterial regulatory proteins, gntR family LOKO_RS17570 PF07729 FCD domain LOKO_RS17575 PF02913 FAD linked oxidases, C-terminal domain LOKO_RS17575 PF01565 FAD binding domain LOKO_RS17580 PF01565 FAD binding domain LOKO_RS17585 PF13183 4Fe-4S dicluster domain LOKO_RS17585 PF02754 Cysteine-rich domain LOKO_RS17590 PF03928 Haem-degrading LOKO_RS17600 PF01258 Prokaryotic dksA/traR C4-type zinc finger LOKO_RS17610 PF00892 EamA-like transporter family LOKO_RS17615 PF04752 ChaC-like protein LOKO_RS17625 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS17630 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS17635 PF13416 Bacterial extracellular solute-binding protein LOKO_RS17640 PF00005 ABC transporter LOKO_RS17640 PF17912 MalK OB fold domain LOKO_RS17645 PF00583 Acetyltransferase (GNAT) family LOKO_RS17645 PF00795 Carbon-nitrogen hydrolase LOKO_RS17650 PF06167 Glucose-regulated metallo-peptidase M90 LOKO_RS17655 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LOKO_RS17655 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LOKO_RS17665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOKO_RS17665 PF03466 LysR substrate binding domain LOKO_RS17670 PF00561 alpha/beta hydrolase fold LOKO_RS17675 PF00180 Isocitrate/isopropylmalate dehydrogenase LOKO_RS17690 PF08241 Methyltransferase domain LOKO_RS17695 PF08212 Lipocalin-like domain LOKO_RS17700 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family LOKO_RS17705 PF00005 ABC transporter LOKO_RS17710 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS17715 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS17720 PF00497 Bacterial extracellular solute-binding proteins, family 3 LOKO_RS17725 PF00497 Bacterial extracellular solute-binding proteins, family 3 LOKO_RS17730 PF00497 Bacterial extracellular solute-binding proteins, family 3 LOKO_RS17735 PF03466 LysR substrate binding domain LOKO_RS17735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOKO_RS17745 PF03707 Bacterial signalling protein N terminal repeat LOKO_RS17745 PF00563 EAL domain LOKO_RS17745 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS17750 PF00173 Cytochrome b5-like Heme/Steroid binding domain LOKO_RS17755 PF00175 Oxidoreductase NAD-binding domain LOKO_RS17755 PF00111 2Fe-2S iron-sulfur cluster binding domain LOKO_RS17755 PF00970 Oxidoreductase FAD-binding domain LOKO_RS17770 PF02222 ATP-grasp domain LOKO_RS17770 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LOKO_RS17775 PF00731 AIR carboxylase LOKO_RS17800 PF02080 TrkA-C domain LOKO_RS17800 PF02254 TrkA-N domain LOKO_RS17805 PF02386 Cation transport protein LOKO_RS17820 PF00072 Response regulator receiver domain LOKO_RS17820 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS17825 PF03942 DTW domain LOKO_RS17830 PF02146 Sir2 family LOKO_RS17835 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) LOKO_RS17855 PF00106 short chain dehydrogenase LOKO_RS17870 PF00881 Nitroreductase family LOKO_RS17880 PF00950 ABC 3 transport family LOKO_RS17885 PF00005 ABC transporter LOKO_RS17890 PF00950 ABC 3 transport family LOKO_RS17895 PF01297 Zinc-uptake complex component A periplasmic LOKO_RS17900 PF02770 Acyl-CoA dehydrogenase, middle domain LOKO_RS17900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LOKO_RS17900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LOKO_RS17905 PF02803 Thiolase, C-terminal domain LOKO_RS17905 PF00108 Thiolase, N-terminal domain LOKO_RS17910 PF13193 AMP-binding enzyme C-terminal domain LOKO_RS17910 PF00501 AMP-binding enzyme LOKO_RS17915 PF01758 Sodium Bile acid symporter family LOKO_RS17935 PF00005 ABC transporter LOKO_RS17940 PF02687 FtsX-like permease family LOKO_RS17940 PF12704 MacB-like periplasmic core domain LOKO_RS17950 PF01053 Cys/Met metabolism PLP-dependent enzyme LOKO_RS17955 PF01037 Lrp/AsnC ligand binding domain LOKO_RS17960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LOKO_RS17960 PF00672 HAMP domain LOKO_RS17960 PF02203 Tar ligand binding domain homologue LOKO_RS17970 PF02465 Flagellar hook-associated protein 2 N-terminus LOKO_RS17970 PF07195 Flagellar hook-associated protein 2 C-terminus LOKO_RS17975 PF01381 Helix-turn-helix LOKO_RS17980 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB LOKO_RS17985 PF00563 EAL domain LOKO_RS17985 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS17985 PF03707 Bacterial signalling protein N terminal repeat LOKO_RS17990 PF08448 PAS fold LOKO_RS17990 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS17995 PF00691 OmpA family LOKO_RS17995 PF13488 Glycine zipper LOKO_RS18000 PF00563 EAL domain LOKO_RS18000 PF03707 Bacterial signalling protein N terminal repeat LOKO_RS18000 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS18005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LOKO_RS18005 PF00672 HAMP domain LOKO_RS18005 PF02203 Tar ligand binding domain homologue LOKO_RS18010 PF03646 FlaG protein LOKO_RS18015 PF02049 Flagellar hook-basal body complex protein FliE LOKO_RS18020 PF08345 Flagellar M-ring protein C-terminal LOKO_RS18020 PF01514 Secretory protein of YscJ/FliF family LOKO_RS18025 PF01514 Secretory protein of YscJ/FliF family LOKO_RS18025 PF08345 Flagellar M-ring protein C-terminal LOKO_RS18030 PF14841 FliG middle domain LOKO_RS18030 PF14842 FliG N-terminal domain LOKO_RS18030 PF01706 FliG C-terminal domain LOKO_RS18040 PF02223 Thymidylate kinase LOKO_RS18045 PF02618 YceG-like family LOKO_RS18050 PF14842 FliG N-terminal domain LOKO_RS18050 PF14841 FliG middle domain LOKO_RS18050 PF01706 FliG C-terminal domain LOKO_RS18060 PF18269 T3SS EscN ATPase C-terminal domain LOKO_RS18060 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LOKO_RS18065 PF02050 Flagellar FliJ protein LOKO_RS18075 PF03748 Flagellar basal body-associated protein FliL LOKO_RS18080 PF02154 Flagellar motor switch protein FliM LOKO_RS18080 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LOKO_RS18085 PF16973 Flagellar motor switch protein FliN N-terminal LOKO_RS18085 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LOKO_RS18090 PF04347 Flagellar biosynthesis protein, FliO LOKO_RS18095 PF00813 FliP family LOKO_RS18100 PF01313 Bacterial export proteins, family 3 LOKO_RS18105 PF01311 Bacterial export proteins, family 1 LOKO_RS18125 PF00669 Bacterial flagellin N-terminal helical region LOKO_RS18130 PF00460 Flagella basal body rod protein LOKO_RS18130 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LOKO_RS18135 PF04955 HupE / UreJ protein LOKO_RS18140 PF02492 CobW/HypB/UreG, nucleotide-binding domain LOKO_RS18145 PF01730 UreF LOKO_RS18150 PF05194 UreE urease accessory protein, C-terminal domain LOKO_RS18150 PF02814 UreE urease accessory protein, N-terminal domain LOKO_RS18155 PF01979 Amidohydrolase family LOKO_RS18155 PF00449 Urease alpha-subunit, N-terminal domain LOKO_RS18160 PF00699 Urease beta subunit LOKO_RS18165 PF00547 Urease, gamma subunit LOKO_RS18170 PF01774 UreD urease accessory protein LOKO_RS18180 PF00005 ABC transporter LOKO_RS18185 PF12399 Branched-chain amino acid ATP-binding cassette transporter LOKO_RS18185 PF00005 ABC transporter LOKO_RS18195 PF02653 Branched-chain amino acid transport system / permease component LOKO_RS18205 PF01970 Tripartite tricarboxylate transporter TctA family LOKO_RS18215 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LOKO_RS18225 PF03480 Bacterial extracellular solute-binding protein, family 7 LOKO_RS18230 PF00694 Aconitase C-terminal domain LOKO_RS18235 PF00330 Aconitase family (aconitate hydratase) LOKO_RS18240 PF00392 Bacterial regulatory proteins, gntR family LOKO_RS18240 PF07702 UTRA domain LOKO_RS18255 PF00857 Isochorismatase family LOKO_RS18270 PF00890 FAD binding domain LOKO_RS18270 PF02910 Fumarate reductase flavoprotein C-term LOKO_RS18275 PF03466 LysR substrate binding domain LOKO_RS18275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LOKO_RS18280 PF00171 Aldehyde dehydrogenase family LOKO_RS18285 PF08448 PAS fold LOKO_RS18285 PF00990 Diguanylate cyclase, GGDEF domain LOKO_RS18310 PF00920 Dehydratase family LOKO_RS18315 PF00486 Transcriptional regulatory protein, C terminal LOKO_RS18315 PF00072 Response regulator receiver domain LOKO_RS18320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOKO_RS18320 PF00512 His Kinase A (phospho-acceptor) domain LOKO_RS18320 PF00672 HAMP domain LOKO_RS18335 PF00528 Binding-protein-dependent transport system inner membrane component LOKO_RS18340 PF00005 ABC transporter LOKO_RS18350 PF12867 DinB superfamily LOKO_RS18350 PF03781 Sulfatase-modifying factor enzyme 1 LOKO_RS18360 PF00586 AIR synthase related protein, N-terminal domain LOKO_RS18360 PF02769 AIR synthase related protein, C-terminal domain LOKO_RS18375 PF01769 Divalent cation transporter LOKO_RS18375 PF00571 CBS domain LOKO_RS18375 PF03448 MgtE intracellular N domain LOKO_RS18380 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LOKO_RS18380 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LOKO_RS18385 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LOKO_RS18385 PF02874 ATP synthase alpha/beta family, beta-barrel domain LOKO_RS18390 PF00231 ATP synthase LOKO_RS18395 PF00306 ATP synthase alpha/beta chain, C terminal domain LOKO_RS18395 PF02874 ATP synthase alpha/beta family, beta-barrel domain LOKO_RS18395 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LOKO_RS18400 PF00213 ATP synthase delta (OSCP) subunit LOKO_RS18405 PF00430 ATP synthase B/B' CF(0) LOKO_RS18410 PF00137 ATP synthase subunit C LOKO_RS18415 PF00119 ATP synthase A chain LOKO_RS18425 PF17762 HTH domain found in ParB protein LOKO_RS18425 PF02195 ParB-like nuclease domain LOKO_RS18430 PF13614 AAA domain LOKO_RS18435 PF02527 rRNA small subunit methyltransferase G LOKO_RS18440 PF01134 Glucose inhibited division protein A LOKO_RS18440 PF13932 GidA associated domain LOKO_RS18445 PF00005 ABC transporter LOKO_RS18450 PF00528 Binding-protein-dependent transport system inner membrane component