locus-tag class description DOM78_RS00005 PF00308 Bacterial dnaA protein DOM78_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix DOM78_RS00005 PF11638 DnaA N-terminal domain DOM78_RS00015 PF00271 Helicase conserved C-terminal domain DOM78_RS00015 PF04851 Type III restriction enzyme, res subunit DOM78_RS00020 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DOM78_RS00020 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DOM78_RS00025 PF00106 short chain dehydrogenase DOM78_RS00035 PF00085 Thioredoxin DOM78_RS00040 PF03601 Conserved hypothetical protein 698 DOM78_RS00060 PF07977 FabA-like domain DOM78_RS00065 PF07977 FabA-like domain DOM78_RS00070 PF04055 Radical SAM superfamily DOM78_RS00070 PF06463 Molybdenum Cofactor Synthesis C DOM78_RS00085 PF00456 Transketolase, thiamine diphosphate binding domain DOM78_RS00090 PF02780 Transketolase, C-terminal domain DOM78_RS00090 PF02779 Transketolase, pyrimidine binding domain DOM78_RS00100 PF13193 AMP-binding enzyme C-terminal domain DOM78_RS00100 PF00501 AMP-binding enzyme DOM78_RS00125 PF08401 Domain of unknown function (DUF1738) DOM78_RS00125 PF18818 Metallopeptidase superfamily domain DOM78_RS00125 PF13362 Toprim domain DOM78_RS00170 PF00672 HAMP domain DOM78_RS00170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM78_RS00170 PF17200 Single Cache domain 2 DOM78_RS00175 PF00107 Zinc-binding dehydrogenase DOM78_RS00175 PF08240 Alcohol dehydrogenase GroES-like domain DOM78_RS00190 PF01925 Sulfite exporter TauE/SafE DOM78_RS00195 PF08245 Mur ligase middle domain DOM78_RS00200 PF00953 Glycosyl transferase family 4 DOM78_RS00200 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DOM78_RS00205 PF01676 Metalloenzyme superfamily DOM78_RS00205 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DOM78_RS00250 PF07715 TonB-dependent Receptor Plug Domain DOM78_RS00250 PF00593 TonB dependent receptor DOM78_RS00255 PF00448 SRP54-type protein, GTPase domain DOM78_RS00260 PF10609 NUBPL iron-transfer P-loop NTPase DOM78_RS00270 PF04539 Sigma-70 region 3 DOM78_RS00270 PF04542 Sigma-70 region 2 DOM78_RS00270 PF04545 Sigma-70, region 4 DOM78_RS00275 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DOM78_RS00275 PF02154 Flagellar motor switch protein FliM DOM78_RS00280 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DOM78_RS00280 PF04509 CheC-like family DOM78_RS00285 PF07992 Pyridine nucleotide-disulphide oxidoreductase DOM78_RS00295 PF17200 Single Cache domain 2 DOM78_RS00295 PF00672 HAMP domain DOM78_RS00295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM78_RS00305 PF00350 Dynamin family DOM78_RS00310 PF00350 Dynamin family DOM78_RS00320 PF01654 Cytochrome bd terminal oxidase subunit I DOM78_RS00325 PF02322 Cytochrome bd terminal oxidase subunit II DOM78_RS00330 PF03222 Tryptophan/tyrosine permease family DOM78_RS00335 PF00132 Bacterial transferase hexapeptide (six repeats) DOM78_RS00335 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DOM78_RS00340 PF16653 Saccharopine dehydrogenase C-terminal domain DOM78_RS00340 PF03435 Saccharopine dehydrogenase NADP binding domain DOM78_RS00340 PF16653 Saccharopine dehydrogenase C-terminal domain DOM78_RS00340 PF03435 Saccharopine dehydrogenase NADP binding domain DOM78_RS00345 PF01555 DNA methylase DOM78_RS00375 PF00403 Heavy-metal-associated domain DOM78_RS00380 PF04055 Radical SAM superfamily DOM78_RS00385 PF04055 Radical SAM superfamily DOM78_RS00385 PF06463 Molybdenum Cofactor Synthesis C DOM78_RS00390 PF12804 MobA-like NTP transferase domain DOM78_RS00395 PF01312 FlhB HrpN YscU SpaS Family DOM78_RS00405 PF03775 Septum formation inhibitor MinC, C-terminal domain DOM78_RS00410 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DOM78_RS00420 PF00288 GHMP kinases N terminal domain DOM78_RS00430 PF04760 Translation initiation factor IF-2, N-terminal region DOM78_RS00430 PF00009 Elongation factor Tu GTP binding domain DOM78_RS00430 PF11987 Translation-initiation factor 2 DOM78_RS00440 PF00578 AhpC/TSA family DOM78_RS00445 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DOM78_RS00450 PF02540 NAD synthase DOM78_RS00455 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal DOM78_RS00455 PF00355 Rieske [2Fe-2S] domain DOM78_RS00460 PF00032 Cytochrome b(C-terminal)/b6/petD DOM78_RS00460 PF00033 Cytochrome b/b6/petB DOM78_RS00470 PF04264 YceI-like domain DOM78_RS00475 PF00005 ABC transporter DOM78_RS00485 PF03062 MBOAT, membrane-bound O-acyltransferase family DOM78_RS00510 PF00460 Flagella basal body rod protein DOM78_RS00510 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DOM78_RS00515 PF03458 UPF0126 domain DOM78_RS00520 PF12169 DNA polymerase III subunits gamma and tau domain III DOM78_RS00520 PF12170 DNA polymerase III tau subunit V interacting with alpha DOM78_RS00525 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DOM78_RS00530 PF12399 Branched-chain amino acid ATP-binding cassette transporter DOM78_RS00530 PF00005 ABC transporter DOM78_RS00535 PF04552 Sigma-54, DNA binding domain DOM78_RS00535 PF00309 Sigma-54 factor, Activator interacting domain (AID) DOM78_RS00535 PF04963 Sigma-54 factor, core binding domain DOM78_RS00540 PF05315 ICEA Protein DOM78_RS00545 PF02086 D12 class N6 adenine-specific DNA methyltransferase DOM78_RS00550 PF00318 Ribosomal protein S2 DOM78_RS00555 PF00889 Elongation factor TS DOM78_RS00560 PF00733 Asparagine synthase DOM78_RS00560 PF13537 Glutamine amidotransferase domain DOM78_RS00575 PF02092 Glycyl-tRNA synthetase beta subunit DOM78_RS00590 PF03062 MBOAT, membrane-bound O-acyltransferase family DOM78_RS00600 PF03062 MBOAT, membrane-bound O-acyltransferase family DOM78_RS00605 PF01515 Phosphate acetyl/butaryl transferase DOM78_RS00605 PF03949 Malic enzyme, NAD binding domain DOM78_RS00605 PF00390 Malic enzyme, N-terminal domain DOM78_RS00610 PF01255 Putative undecaprenyl diphosphate synthase DOM78_RS00615 PF12804 MobA-like NTP transferase domain DOM78_RS00615 PF14602 Hexapeptide repeat of succinyl-transferase DOM78_RS00620 PF02384 N-6 DNA Methylase DOM78_RS00620 PF12161 HsdM N-terminal domain DOM78_RS00625 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DOM78_RS00625 PF00460 Flagella basal body rod protein DOM78_RS00635 PF05140 ResB-like family DOM78_RS00635 PF01578 Cytochrome C assembly protein DOM78_RS00645 PF00762 Ferrochelatase DOM78_RS00655 PF04452 RNA methyltransferase DOM78_RS00660 PF01842 ACT domain DOM78_RS00660 PF02153 Prephenate dehydrogenase DOM78_RS00665 PF07244 Surface antigen variable number repeat DOM78_RS00665 PF01103 Surface antigen DOM78_RS00670 PF04055 Radical SAM superfamily DOM78_RS00675 PF05193 Peptidase M16 inactive domain DOM78_RS00680 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DOM78_RS00680 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DOM78_RS00715 PF00218 Indole-3-glycerol phosphate synthase DOM78_RS00720 PF00037 4Fe-4S binding domain DOM78_RS00770 PF00534 Glycosyl transferases group 1 DOM78_RS00770 PF17102 Stealth protein CR3, conserved region 3 DOM78_RS00770 PF17103 Stealth protein CR4, conserved region 4 DOM78_RS00770 PF11380 Stealth protein CR2, conserved region 2 DOM78_RS00770 PF17101 Stealth protein CR1, conserved region 1 DOM78_RS00775 PF00535 Glycosyl transferase family 2 DOM78_RS00790 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DOM78_RS00790 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DOM78_RS00795 PF10788 Protein of unknown function (DUF2603) DOM78_RS00800 PF04055 Radical SAM superfamily DOM78_RS00800 PF06969 HemN C-terminal domain DOM78_RS00805 PF02754 Cysteine-rich domain DOM78_RS00825 PF12804 MobA-like NTP transferase domain DOM78_RS00825 PF00132 Bacterial transferase hexapeptide (six repeats) DOM78_RS00830 PF00813 FliP family DOM78_RS00835 PF05958 tRNA (Uracil-5-)-methyltransferase DOM78_RS00850 PF00075 RNase H DOM78_RS00855 PF14622 Ribonuclease-III-like DOM78_RS00855 PF00035 Double-stranded RNA binding motif DOM78_RS00860 PF01264 Chorismate synthase DOM78_RS00865 PF01425 Amidase DOM78_RS00870 PF00571 CBS domain DOM78_RS00870 PF00478 IMP dehydrogenase / GMP reductase domain DOM78_RS00890 PF07733 Bacterial DNA polymerase III alpha NTPase domain DOM78_RS00890 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DOM78_RS00890 PF02811 PHP domain DOM78_RS00890 PF14579 Helix-hairpin-helix motif DOM78_RS00895 PF13184 NusA-like KH domain DOM78_RS00895 PF08529 NusA N-terminal domain DOM78_RS00900 PF01220 Dehydroquinase class II DOM78_RS00905 PF00557 Metallopeptidase family M24 DOM78_RS00905 PF01321 Creatinase/Prolidase N-terminal domain DOM78_RS00920 PF01245 Ribosomal protein L19 DOM78_RS00925 PF01746 tRNA (Guanine-1)-methyltransferase DOM78_RS00930 PF05239 PRC-barrel domain DOM78_RS00930 PF01782 RimM N-terminal domain DOM78_RS00940 PF00886 Ribosomal protein S16 DOM78_RS00945 PF02881 SRP54-type protein, helical bundle domain DOM78_RS00945 PF00448 SRP54-type protein, GTPase domain DOM78_RS00945 PF02978 Signal peptide binding domain DOM78_RS00950 PF01475 Ferric uptake regulator family DOM78_RS00955 PF12706 Beta-lactamase superfamily domain DOM78_RS00960 PF00581 Rhodanese-like domain DOM78_RS00965 PF08264 Anticodon-binding domain of tRNA DOM78_RS00965 PF00133 tRNA synthetases class I (I, L, M and V) DOM78_RS00965 PF10458 Valyl tRNA synthetase tRNA binding arm DOM78_RS00970 PF02623 FliW protein DOM78_RS00975 PF00580 UvrD/REP helicase N-terminal domain DOM78_RS00975 PF13361 UvrD-like helicase C-terminal domain DOM78_RS00990 PF03692 Putative zinc- or iron-chelating domain DOM78_RS01005 PF03372 Endonuclease/Exonuclease/phosphatase family DOM78_RS01025 PF04101 Glycosyltransferase family 28 C-terminal domain DOM78_RS01025 PF03033 Glycosyltransferase family 28 N-terminal domain DOM78_RS01030 PF00749 tRNA synthetases class I (E and Q), catalytic domain DOM78_RS01035 PF03459 TOBE domain DOM78_RS01050 PF02660 Glycerol-3-phosphate acyltransferase DOM78_RS01060 PF03976 Polyphosphate kinase 2 (PPK2) DOM78_RS01065 PF18146 Damage-inducible protein CinA KH domain DOM78_RS01065 PF02464 Competence-damaged protein DOM78_RS01065 PF00994 Probable molybdopterin binding domain DOM78_RS01095 PF01025 GrpE DOM78_RS01105 PF00012 Hsp70 protein DOM78_RS01110 PF17763 Glutaminase/Asparaginase C-terminal domain DOM78_RS01110 PF00710 Asparaginase, N-terminal DOM78_RS01115 PF03606 C4-dicarboxylate anaerobic carrier DOM78_RS01120 PF00199 Catalase DOM78_RS01120 PF06628 Catalase-related immune-responsive DOM78_RS01125 PF00023 Ankyrin repeat DOM78_RS01125 PF12796 Ankyrin repeats (3 copies) DOM78_RS01130 PF03462 PCRF domain DOM78_RS01130 PF00472 RF-1 domain DOM78_RS01175 PF01497 Periplasmic binding protein DOM78_RS01185 PF00593 TonB dependent receptor DOM78_RS01185 PF07715 TonB-dependent Receptor Plug Domain DOM78_RS01190 PF01032 FecCD transport family DOM78_RS01195 PF00005 ABC transporter DOM78_RS01235 PF13614 AAA domain DOM78_RS01305 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DOM78_RS01305 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DOM78_RS01310 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DOM78_RS01315 PF01202 Shikimate kinase DOM78_RS01330 PF00113 Enolase, C-terminal TIM barrel domain DOM78_RS01330 PF03952 Enolase, N-terminal domain DOM78_RS01335 PF00154 recA bacterial DNA recombination protein DOM78_RS01340 PF02621 Menaquinone biosynthesis DOM78_RS01345 PF01594 AI-2E family transporter DOM78_RS01355 PF02543 Carbamoyltransferase N-terminus DOM78_RS01355 PF16861 Carbamoyltransferase C-terminus DOM78_RS01370 PF01053 Cys/Met metabolism PLP-dependent enzyme DOM78_RS01375 PF04204 Homoserine O-succinyltransferase DOM78_RS01380 PF01784 NIF3 (NGG1p interacting factor 3) DOM78_RS01390 PF00534 Glycosyl transferases group 1 DOM78_RS01390 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DOM78_RS01395 PF00849 RNA pseudouridylate synthase DOM78_RS01415 PF00873 AcrB/AcrD/AcrF family DOM78_RS01435 PF00809 Pterin binding enzyme DOM78_RS01450 PF01842 ACT domain DOM78_RS01450 PF13840 ACT domain DOM78_RS01450 PF00696 Amino acid kinase family DOM78_RS01455 PF00293 NUDIX domain DOM78_RS01460 PF04055 Radical SAM superfamily DOM78_RS01460 PF06969 HemN C-terminal domain DOM78_RS01465 PF13477 Glycosyl transferase 4-like DOM78_RS01465 PF00534 Glycosyl transferases group 1 DOM78_RS01505 PF01850 PIN domain DOM78_RS01510 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DOM78_RS01525 PF01136 Peptidase family U32 DOM78_RS01530 PF00005 ABC transporter DOM78_RS01530 PF03459 TOBE domain DOM78_RS01535 PF00528 Binding-protein-dependent transport system inner membrane component DOM78_RS01550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOM78_RS01550 PF03459 TOBE domain DOM78_RS01555 PF02589 LUD domain DOM78_RS01560 PF02589 LUD domain DOM78_RS01560 PF13183 4Fe-4S dicluster domain DOM78_RS01560 PF11870 Domain of unknown function (DUF3390) DOM78_RS01565 PF02754 Cysteine-rich domain DOM78_RS01570 PF02652 L-lactate permease DOM78_RS01575 PF05686 Glycosyl transferase family 90 DOM78_RS01580 PF01370 NAD dependent epimerase/dehydratase family DOM78_RS01590 PF01593 Flavin containing amine oxidoreductase DOM78_RS01610 PF00534 Glycosyl transferases group 1 DOM78_RS01610 PF13477 Glycosyl transferase 4-like DOM78_RS01650 PF01850 PIN domain DOM78_RS01655 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DOM78_RS01670 PF01136 Peptidase family U32 DOM78_RS01675 PF00005 ABC transporter DOM78_RS01675 PF03459 TOBE domain DOM78_RS01680 PF00528 Binding-protein-dependent transport system inner membrane component DOM78_RS01695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOM78_RS01695 PF03459 TOBE domain DOM78_RS01700 PF02589 LUD domain DOM78_RS01705 PF13183 4Fe-4S dicluster domain DOM78_RS01705 PF02589 LUD domain DOM78_RS01705 PF11870 Domain of unknown function (DUF3390) DOM78_RS01710 PF02754 Cysteine-rich domain DOM78_RS01715 PF02652 L-lactate permease DOM78_RS01720 PF05686 Glycosyl transferase family 90 DOM78_RS01725 PF01370 NAD dependent epimerase/dehydratase family DOM78_RS01735 PF01593 Flavin containing amine oxidoreductase DOM78_RS01755 PF00535 Glycosyl transferase family 2 DOM78_RS01760 PF00535 Glycosyl transferase family 2 DOM78_RS01765 PF04909 Amidohydrolase DOM78_RS01770 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DOM78_RS01770 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DOM78_RS01770 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DOM78_RS01770 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DOM78_RS01775 PF00155 Aminotransferase class I and II DOM78_RS01785 PF01706 FliG C-terminal domain DOM78_RS01785 PF14842 FliG N-terminal domain DOM78_RS01785 PF14841 FliG middle domain DOM78_RS01795 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DOM78_RS01795 PF02779 Transketolase, pyrimidine binding domain DOM78_RS01795 PF02780 Transketolase, C-terminal domain DOM78_RS01805 PF00268 Ribonucleotide reductase, small chain DOM78_RS01810 PF00795 Carbon-nitrogen hydrolase DOM78_RS01830 PF01416 tRNA pseudouridine synthase DOM78_RS01835 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DOM78_RS01835 PF02843 Phosphoribosylglycinamide synthetase, C domain DOM78_RS01835 PF02844 Phosphoribosylglycinamide synthetase, N domain DOM78_RS01845 PF04453 LPS transport system D DOM78_RS01845 PF03968 OstA-like protein DOM78_RS01855 PF00575 S1 RNA binding domain DOM78_RS01855 PF01138 3' exoribonuclease family, domain 1 DOM78_RS01855 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DOM78_RS01855 PF03725 3' exoribonuclease family, domain 2 DOM78_RS01855 PF00013 KH domain DOM78_RS01860 PF00137 ATP synthase subunit C DOM78_RS01875 PF03553 Na+/H+ antiporter family DOM78_RS01880 PF18073 Rubredoxin metal binding domain DOM78_RS01885 PF00448 SRP54-type protein, GTPase domain DOM78_RS01900 PF12072 Domain of unknown function (DUF3552) DOM78_RS01900 PF00013 KH domain DOM78_RS01900 PF01966 HD domain DOM78_RS01905 PF07690 Major Facilitator Superfamily DOM78_RS01915 PF01207 Dihydrouridine synthase (Dus) DOM78_RS01920 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DOM78_RS01925 PF00072 Response regulator receiver domain DOM78_RS01925 PF01584 CheW-like domain DOM78_RS01930 PF01066 CDP-alcohol phosphatidyltransferase DOM78_RS01940 PF17862 AAA+ lid domain DOM78_RS01940 PF01434 Peptidase family M41 DOM78_RS01940 PF00004 ATPase family associated with various cellular activities (AAA) DOM78_RS01950 PF00072 Response regulator receiver domain DOM78_RS01955 PF00977 Histidine biosynthesis protein DOM78_RS01975 PF01479 S4 domain DOM78_RS01975 PF00579 tRNA synthetases class I (W and Y) DOM78_RS01980 PF04607 Region found in RelA / SpoT proteins DOM78_RS01980 PF02824 TGS domain DOM78_RS01980 PF13291 ACT domain DOM78_RS01985 PF01192 RNA polymerase Rpb6 DOM78_RS01990 PF00696 Amino acid kinase family DOM78_RS02000 PF01596 O-methyltransferase DOM78_RS02005 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DOM78_RS02005 PF01872 RibD C-terminal domain DOM78_RS02010 PF17384 RimP C-terminal SH3 domain DOM78_RS02010 PF02576 RimP N-terminal domain DOM78_RS02015 PF02033 Ribosome-binding factor A DOM78_RS02020 PF01702 Queuine tRNA-ribosyltransferase DOM78_RS02025 PF03807 NADP oxidoreductase coenzyme F420-dependent DOM78_RS02025 PF14748 Pyrroline-5-carboxylate reductase dimerisation DOM78_RS02030 PF02623 FliW protein DOM78_RS02035 PF13525 Outer membrane lipoprotein DOM78_RS02040 PF02190 ATP-dependent protease La (LON) substrate-binding domain DOM78_RS02040 PF05362 Lon protease (S16) C-terminal proteolytic domain DOM78_RS02040 PF00004 ATPase family associated with various cellular activities (AAA) DOM78_RS02055 PF00291 Pyridoxal-phosphate dependent enzyme DOM78_RS02070 PF02086 D12 class N6 adenine-specific DNA methyltransferase DOM78_RS02080 PF00920 Dehydratase family DOM78_RS02095 PF03951 Glutamine synthetase, beta-Grasp domain DOM78_RS02095 PF00120 Glutamine synthetase, catalytic domain DOM78_RS02100 PF00391 PEP-utilising enzyme, mobile domain DOM78_RS02100 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DOM78_RS02110 PF00579 tRNA synthetases class I (W and Y) DOM78_RS02115 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DOM78_RS02125 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DOM78_RS02125 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DOM78_RS02130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DOM78_RS02135 PF04539 Sigma-70 region 3 DOM78_RS02135 PF00140 Sigma-70 factor, region 1.2 DOM78_RS02135 PF04542 Sigma-70 region 2 DOM78_RS02135 PF04545 Sigma-70, region 4 DOM78_RS02145 PF00312 Ribosomal protein S15 DOM78_RS02155 PF01084 Ribosomal protein S18 DOM78_RS02160 PF00436 Single-strand binding protein family DOM78_RS02165 PF01250 Ribosomal protein S6 DOM78_RS02170 PF06144 DNA polymerase III, delta subunit DOM78_RS02175 PF00773 RNB domain DOM78_RS02190 PF02091 Glycyl-tRNA synthetase alpha subunit DOM78_RS02205 PF00731 AIR carboxylase DOM78_RS02210 PF00291 Pyridoxal-phosphate dependent enzyme DOM78_RS02225 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DOM78_RS02235 PF00483 Nucleotidyl transferase DOM78_RS02250 PF00749 tRNA synthetases class I (E and Q), catalytic domain DOM78_RS02270 PF02583 Metal-sensitive transcriptional repressor DOM78_RS02275 PF01078 Magnesium chelatase, subunit ChlI DOM78_RS02275 PF13335 Magnesium chelatase, subunit ChlI C-terminal DOM78_RS02280 PF01327 Polypeptide deformylase DOM78_RS02290 PF00574 Clp protease DOM78_RS02295 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DOM78_RS02295 PF05698 Bacterial trigger factor protein (TF) C-terminus DOM78_RS02295 PF05697 Bacterial trigger factor protein (TF) DOM78_RS02300 PF18269 T3SS EscN ATPase C-terminal domain DOM78_RS02300 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DOM78_RS02305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM78_RS02305 PF00672 HAMP domain DOM78_RS02305 PF17200 Single Cache domain 2 DOM78_RS02310 PF01008 Initiation factor 2 subunit family DOM78_RS02310 PF03061 Thioesterase superfamily DOM78_RS02315 PF08003 Protein of unknown function (DUF1698) DOM78_RS02325 PF01588 Putative tRNA binding domain DOM78_RS02325 PF09334 tRNA synthetases class I (M) DOM78_RS02325 PF00133 tRNA synthetases class I (I, L, M and V) DOM78_RS02335 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain DOM78_RS02345 PF00834 Ribulose-phosphate 3 epimerase family DOM78_RS02350 PF00929 Exonuclease DOM78_RS02350 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DOM78_RS02350 PF14579 Helix-hairpin-helix motif DOM78_RS02350 PF11490 DNA polymerase III polC-type N-terminus II DOM78_RS02350 PF02811 PHP domain DOM78_RS02350 PF07733 Bacterial DNA polymerase III alpha NTPase domain DOM78_RS02355 PF05175 Methyltransferase small domain DOM78_RS02355 PF17827 PrmC N-terminal domain DOM78_RS02360 PF16491 CAAX prenyl protease N-terminal, five membrane helices DOM78_RS02360 PF01435 Peptidase family M48 DOM78_RS02365 PF00117 Glutamine amidotransferase class-I DOM78_RS02365 PF06418 CTP synthase N-terminus DOM78_RS02370 PF01368 DHH family DOM78_RS02370 PF17768 RecJ OB domain DOM78_RS02370 PF02272 DHHA1 domain DOM78_RS02375 PF00497 Bacterial extracellular solute-binding proteins, family 3 DOM78_RS02380 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DOM78_RS02385 PF00109 Beta-ketoacyl synthase, N-terminal domain DOM78_RS02385 PF02801 Beta-ketoacyl synthase, C-terminal domain DOM78_RS02390 PF00550 Phosphopantetheine attachment site DOM78_RS02400 PF00912 Transglycosylase DOM78_RS02400 PF00905 Penicillin binding protein transpeptidase domain DOM78_RS02400 PF06832 Penicillin-Binding Protein C-terminus Family DOM78_RS02405 PF07703 Alpha-2-macroglobulin bait region domain DOM78_RS02405 PF07678 A-macroglobulin TED domain DOM78_RS02405 PF00207 Alpha-2-macroglobulin family DOM78_RS02405 PF01835 MG2 domain DOM78_RS02405 PF11974 Bacterial alpha-2-macroglobulin MG3 domain DOM78_RS02405 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain DOM78_RS02405 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain DOM78_RS02405 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain DOM78_RS02405 PF17962 Bacterial macroglobulin domain 6 DOM78_RS02410 PF00849 RNA pseudouridylate synthase DOM78_RS02425 PF12849 PBP superfamily domain DOM78_RS02430 PF00528 Binding-protein-dependent transport system inner membrane component DOM78_RS02435 PF00528 Binding-protein-dependent transport system inner membrane component DOM78_RS02440 PF00005 ABC transporter DOM78_RS02450 PF00072 Response regulator receiver domain DOM78_RS02450 PF00486 Transcriptional regulatory protein, C terminal DOM78_RS02455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM78_RS02455 PF00989 PAS fold DOM78_RS02455 PF16736 Single Cache-like DOM78_RS02455 PF00512 His Kinase A (phospho-acceptor) domain DOM78_RS02465 PF01592 NifU-like N terminal domain DOM78_RS02465 PF01106 NifU-like domain DOM78_RS02465 PF04324 BFD-like [2Fe-2S] binding domain DOM78_RS02475 PF00145 C-5 cytosine-specific DNA methylase DOM78_RS02480 PF00266 Aminotransferase class-V DOM78_RS02485 PF00939 Sodium:sulfate symporter transmembrane region DOM78_RS02495 PF00206 Lyase DOM78_RS02495 PF10397 Adenylosuccinate lyase C-terminus DOM78_RS02515 PF00285 Citrate synthase, C-terminal domain DOM78_RS02520 PF14693 Ribosomal protein TL5, C-terminal domain DOM78_RS02520 PF01386 Ribosomal L25p family DOM78_RS02525 PF01195 Peptidyl-tRNA hydrolase DOM78_RS02535 PF00119 ATP synthase A chain DOM78_RS02540 PF02581 Thiamine monophosphate synthase DOM78_RS02560 PF13146 TRL-like protein family DOM78_RS02580 PF01883 Iron-sulfur cluster assembly protein DOM78_RS02580 PF10609 NUBPL iron-transfer P-loop NTPase DOM78_RS02595 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DOM78_RS02595 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DOM78_RS02600 PF01842 ACT domain DOM78_RS02600 PF01817 Chorismate mutase type II DOM78_RS02600 PF00800 Prephenate dehydratase DOM78_RS02610 PF01183 Glycosyl hydrolases family 25 DOM78_RS02615 PF12146 Serine aminopeptidase, S33 DOM78_RS02625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DOM78_RS02625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DOM78_RS02625 PF02770 Acyl-CoA dehydrogenase, middle domain DOM78_RS02635 PF01142 tRNA pseudouridine synthase D (TruD) DOM78_RS02640 PF00842 Alanine racemase, C-terminal domain DOM78_RS02640 PF01168 Alanine racemase, N-terminal domain DOM78_RS02650 PF02132 RecR protein DOM78_RS02655 PF01556 DnaJ C terminal domain DOM78_RS02655 PF00684 DnaJ central domain DOM78_RS02655 PF00226 DnaJ domain DOM78_RS02665 PF13580 SIS domain DOM78_RS02670 PF01467 Cytidylyltransferase-like DOM78_RS02670 PF00294 pfkB family carbohydrate kinase DOM78_RS02675 PF01370 NAD dependent epimerase/dehydratase family DOM78_RS02680 PF08645 Polynucleotide kinase 3 phosphatase DOM78_RS02700 PF10417 C-terminal domain of 1-Cys peroxiredoxin DOM78_RS02700 PF00578 AhpC/TSA family DOM78_RS02705 PF04341 Protein of unknown function, DUF485 DOM78_RS02710 PF00474 Sodium:solute symporter family DOM78_RS02720 PF04851 Type III restriction enzyme, res subunit DOM78_RS02720 PF02151 UvrB/uvrC motif DOM78_RS02720 PF12344 Ultra-violet resistance protein B DOM78_RS02720 PF17757 UvrB interaction domain DOM78_RS02720 PF00271 Helicase conserved C-terminal domain DOM78_RS02735 PF18074 Primosomal protein N C-terminal domain DOM78_RS02735 PF17764 3′ DNA-binding domain (3′BD) DOM78_RS02735 PF00270 DEAD/DEAH box helicase DOM78_RS02735 PF00271 Helicase conserved C-terminal domain DOM78_RS02735 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DOM78_RS02750 PF01648 4'-phosphopantetheinyl transferase superfamily DOM78_RS02760 PF01467 Cytidylyltransferase-like DOM78_RS02765 PF01402 Ribbon-helix-helix protein, copG family DOM78_RS02765 PF08753 NikR C terminal nickel binding domain DOM78_RS02770 PF01618 MotA/TolQ/ExbB proton channel family DOM78_RS02775 PF02472 Biopolymer transport protein ExbD/TolR DOM78_RS02785 PF00005 ABC transporter DOM78_RS02790 PF00528 Binding-protein-dependent transport system inner membrane component DOM78_RS02795 PF00528 Binding-protein-dependent transport system inner membrane component DOM78_RS02820 PF00795 Carbon-nitrogen hydrolase DOM78_RS02825 PF00899 ThiF family DOM78_RS02830 PF01975 Survival protein SurE DOM78_RS02835 PF00348 Polyprenyl synthetase DOM78_RS02845 PF02575 YbaB/EbfC DNA-binding family DOM78_RS02850 PF02261 Aspartate decarboxylase DOM78_RS02885 PF04305 Protein of unknown function (DUF455) DOM78_RS02895 PF00162 Phosphoglycerate kinase DOM78_RS02925 PF17788 HypF Kae1-like domain DOM78_RS02925 PF00708 Acylphosphatase DOM78_RS02925 PF01300 Telomere recombination DOM78_RS02925 PF07503 HypF finger DOM78_RS02930 PF02492 CobW/HypB/UreG, nucleotide-binding domain DOM78_RS02935 PF01455 HupF/HypC family DOM78_RS02940 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) DOM78_RS02945 PF01924 Hydrogenase formation hypA family DOM78_RS02955 PF02769 AIR synthase related protein, C-terminal domain DOM78_RS02955 PF00586 AIR synthase related protein, N-terminal domain DOM78_RS02960 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DOM78_RS02970 PF07516 SecA Wing and Scaffold domain DOM78_RS02970 PF01043 SecA preprotein cross-linking domain DOM78_RS02970 PF07517 SecA DEAD-like domain DOM78_RS02970 PF02810 SEC-C motif DOM78_RS02975 PF03548 Outer membrane lipoprotein carrier protein LolA DOM78_RS02980 PF04715 Anthranilate synthase component I, N terminal region DOM78_RS02980 PF00425 chorismate binding enzyme DOM78_RS02985 PF00117 Glutamine amidotransferase class-I DOM78_RS02985 PF02885 Glycosyl transferase family, helical bundle domain DOM78_RS02985 PF00591 Glycosyl transferase family, a/b domain DOM78_RS02995 PF03948 Ribosomal protein L9, C-terminal domain DOM78_RS02995 PF01281 Ribosomal protein L9, N-terminal domain DOM78_RS03000 PF00227 Proteasome subunit DOM78_RS03005 PF10431 C-terminal, D2-small domain, of ClpB protein DOM78_RS03005 PF07724 AAA domain (Cdc48 subfamily) DOM78_RS03010 PF07650 KH domain DOM78_RS03010 PF01926 50S ribosome-binding GTPase DOM78_RS03020 PF01553 Acyltransferase DOM78_RS03020 PF00501 AMP-binding enzyme DOM78_RS03020 PF13193 AMP-binding enzyme C-terminal domain DOM78_RS03025 PF00338 Ribosomal protein S10p/S20e DOM78_RS03030 PF00297 Ribosomal protein L3 DOM78_RS03035 PF00573 Ribosomal protein L4/L1 family DOM78_RS03040 PF00276 Ribosomal protein L23 DOM78_RS03045 PF00181 Ribosomal Proteins L2, RNA binding domain DOM78_RS03045 PF03947 Ribosomal Proteins L2, C-terminal domain DOM78_RS03050 PF00203 Ribosomal protein S19 DOM78_RS03055 PF00237 Ribosomal protein L22p/L17e DOM78_RS03060 PF00189 Ribosomal protein S3, C-terminal domain DOM78_RS03060 PF07650 KH domain DOM78_RS03065 PF00252 Ribosomal protein L16p/L10e DOM78_RS03070 PF00831 Ribosomal L29 protein DOM78_RS03075 PF00366 Ribosomal protein S17 DOM78_RS03080 PF00238 Ribosomal protein L14p/L23e DOM78_RS03085 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DOM78_RS03085 PF00467 KOW motif DOM78_RS03090 PF00673 ribosomal L5P family C-terminus DOM78_RS03090 PF00281 Ribosomal protein L5 DOM78_RS03095 PF00253 Ribosomal protein S14p/S29e DOM78_RS03100 PF00410 Ribosomal protein S8 DOM78_RS03105 PF00347 Ribosomal protein L6 DOM78_RS03110 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DOM78_RS03115 PF03719 Ribosomal protein S5, C-terminal domain DOM78_RS03115 PF00333 Ribosomal protein S5, N-terminal domain DOM78_RS03120 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DOM78_RS03125 PF00344 SecY translocase DOM78_RS03130 PF00557 Metallopeptidase family M24 DOM78_RS03135 PF01176 Translation initiation factor 1A / IF-1 DOM78_RS03140 PF00444 Ribosomal protein L36 DOM78_RS03145 PF00416 Ribosomal protein S13/S18 DOM78_RS03150 PF00411 Ribosomal protein S11 DOM78_RS03155 PF00163 Ribosomal protein S4/S9 N-terminal domain DOM78_RS03155 PF01479 S4 domain DOM78_RS03160 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DOM78_RS03160 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DOM78_RS03160 PF01000 RNA polymerase Rpb3/RpoA insert domain DOM78_RS03165 PF01196 Ribosomal protein L17 DOM78_RS03170 PF00425 chorismate binding enzyme DOM78_RS03170 PF04715 Anthranilate synthase component I, N terminal region DOM78_RS03175 PF00117 Glutamine amidotransferase class-I DOM78_RS03200 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DOM78_RS03200 PF00384 Molybdopterin oxidoreductase DOM78_RS03200 PF12838 4Fe-4S dicluster domain DOM78_RS03200 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DOM78_RS03200 PF01568 Molydopterin dinucleotide binding domain DOM78_RS03205 PF13247 4Fe-4S dicluster domain DOM78_RS03215 PF02634 FdhD/NarQ family DOM78_RS03225 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DOM78_RS03230 PF00873 AcrB/AcrD/AcrF family DOM78_RS03245 PF01219 Prokaryotic diacylglycerol kinase DOM78_RS03255 PF02335 Cytochrome c552 DOM78_RS03305 PF00210 Ferritin-like domain DOM78_RS03310 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DOM78_RS03330 PF00535 Glycosyl transferase family 2 DOM78_RS03340 PF00899 ThiF family DOM78_RS03350 PF00361 Proton-conducting membrane transporter DOM78_RS03355 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus DOM78_RS03355 PF00361 Proton-conducting membrane transporter DOM78_RS03360 PF00361 Proton-conducting membrane transporter DOM78_RS03360 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DOM78_RS03365 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DOM78_RS03370 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DOM78_RS03375 PF12838 4Fe-4S dicluster domain DOM78_RS03380 PF00146 NADH dehydrogenase DOM78_RS03385 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DOM78_RS03385 PF12838 4Fe-4S dicluster domain DOM78_RS03385 PF01568 Molydopterin dinucleotide binding domain DOM78_RS03385 PF00384 Molybdopterin oxidoreductase DOM78_RS03385 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DOM78_RS03400 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DOM78_RS03405 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DOM78_RS03405 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DOM78_RS03410 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DOM78_RS03415 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DOM78_RS03425 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DOM78_RS03425 PF14572 Phosphoribosyl synthetase-associated domain DOM78_RS03435 PF01926 50S ribosome-binding GTPase DOM78_RS03435 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DOM78_RS03450 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DOM78_RS03450 PF01502 Phosphoribosyl-AMP cyclohydrolase DOM78_RS03455 PF01145 SPFH domain / Band 7 family DOM78_RS03460 PF01063 Amino-transferase class IV DOM78_RS03465 PF00005 ABC transporter DOM78_RS03465 PF16326 ABC transporter C-terminal domain DOM78_RS03465 PF12848 ABC transporter DOM78_RS03475 PF17854 FtsK alpha domain DOM78_RS03475 PF01580 FtsK/SpoIIIE family DOM78_RS03475 PF09397 Ftsk gamma domain DOM78_RS03480 PF17820 PDZ domain DOM78_RS03480 PF13180 PDZ domain DOM78_RS03485 PF03705 CheR methyltransferase, all-alpha domain DOM78_RS03485 PF01739 CheR methyltransferase, SAM binding domain DOM78_RS03490 PF01339 CheB methylesterase DOM78_RS03490 PF00072 Response regulator receiver domain DOM78_RS03520 PF02527 rRNA small subunit methyltransferase G DOM78_RS03525 PF02547 Queuosine biosynthesis protein DOM78_RS03530 PF00902 Sec-independent protein translocase protein (TatC) DOM78_RS03540 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DOM78_RS03540 PF02403 Seryl-tRNA synthetase N-terminal domain DOM78_RS03550 PF00149 Calcineurin-like phosphoesterase DOM78_RS03555 PF00453 Ribosomal protein L20 DOM78_RS03560 PF01632 Ribosomal protein L35 DOM78_RS03565 PF05198 Translation initiation factor IF-3, N-terminal domain DOM78_RS03565 PF00707 Translation initiation factor IF-3, C-terminal domain DOM78_RS03570 PF03129 Anticodon binding domain DOM78_RS03570 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DOM78_RS03570 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DOM78_RS03575 PF01765 Ribosome recycling factor DOM78_RS03580 PF03840 Preprotein translocase SecG subunit DOM78_RS03600 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DOM78_RS03605 PF01313 Bacterial export proteins, family 3 DOM78_RS03610 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DOM78_RS03620 PF00691 OmpA family DOM78_RS03625 PF07676 WD40-like Beta Propeller Repeat DOM78_RS03625 PF04052 TolB amino-terminal domain DOM78_RS03635 PF02472 Biopolymer transport protein ExbD/TolR DOM78_RS03640 PF01618 MotA/TolQ/ExbB proton channel family DOM78_RS03645 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DOM78_RS03650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DOM78_RS03650 PF02874 ATP synthase alpha/beta family, beta-barrel domain DOM78_RS03655 PF00231 ATP synthase DOM78_RS03660 PF02874 ATP synthase alpha/beta family, beta-barrel domain DOM78_RS03660 PF00306 ATP synthase alpha/beta chain, C terminal domain DOM78_RS03660 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DOM78_RS03665 PF00213 ATP synthase delta (OSCP) subunit DOM78_RS03670 PF00430 ATP synthase B/B' CF(0) DOM78_RS03680 PF02195 ParB-like nuclease domain DOM78_RS03680 PF17762 HTH domain found in ParB protein DOM78_RS03685 PF13614 AAA domain DOM78_RS03690 PF03099 Biotin/lipoate A/B protein ligase family DOM78_RS03690 PF02237 Biotin protein ligase C terminal domain DOM78_RS03690 PF03309 Type III pantothenate kinase DOM78_RS03695 PF02911 Formyl transferase, C-terminal domain DOM78_RS03695 PF00551 Formyl transferase DOM78_RS03700 PF00696 Amino acid kinase family DOM78_RS03705 PF01370 NAD dependent epimerase/dehydratase family DOM78_RS03715 PF03062 MBOAT, membrane-bound O-acyltransferase family DOM78_RS03725 PF03062 MBOAT, membrane-bound O-acyltransferase family DOM78_RS03730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DOM78_RS03735 PF00528 Binding-protein-dependent transport system inner membrane component DOM78_RS03740 PF00528 Binding-protein-dependent transport system inner membrane component DOM78_RS03745 PF00005 ABC transporter DOM78_RS03750 PF16363 GDP-mannose 4,6 dehydratase DOM78_RS03775 PF00535 Glycosyl transferase family 2 DOM78_RS03785 PF00535 Glycosyl transferase family 2 DOM78_RS03790 PF13426 PAS domain DOM78_RS03790 PF00672 HAMP domain DOM78_RS03790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM78_RS03815 PF02348 Cytidylyltransferase DOM78_RS03825 PF00027 Cyclic nucleotide-binding domain DOM78_RS03825 PF13545 Crp-like helix-turn-helix domain DOM78_RS03835 PF01152 Bacterial-like globin DOM78_RS03840 PF00756 Putative esterase DOM78_RS03860 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) DOM78_RS03865 PF12801 4Fe-4S binding domain DOM78_RS03865 PF13187 4Fe-4S dicluster domain DOM78_RS03870 PF12800 4Fe-4S binding domain DOM78_RS03870 PF12838 4Fe-4S dicluster domain DOM78_RS03875 PF00384 Molybdopterin oxidoreductase DOM78_RS03875 PF10518 TAT (twin-arginine translocation) pathway signal sequence DOM78_RS03875 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DOM78_RS03875 PF01568 Molydopterin dinucleotide binding domain DOM78_RS03880 PF13419 Haloacid dehalogenase-like hydrolase DOM78_RS03885 PF03449 Transcription elongation factor, N-terminal DOM78_RS03885 PF01272 Transcription elongation factor, GreA/GreB, C-term DOM78_RS03890 PF00692 dUTPase DOM78_RS03900 PF15437 Plasminogen-binding protein pgbA C-terminal DOM78_RS03905 PF03309 Type III pantothenate kinase DOM78_RS03910 PF01634 ATP phosphoribosyltransferase DOM78_RS03940 PF01709 Transcriptional regulator DOM78_RS03950 PF00490 Delta-aminolevulinic acid dehydratase DOM78_RS03960 PF00486 Transcriptional regulatory protein, C terminal DOM78_RS03960 PF00072 Response regulator receiver domain DOM78_RS03975 PF01171 PP-loop family DOM78_RS03985 PF07690 Major Facilitator Superfamily DOM78_RS03990 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DOM78_RS04000 PF03572 Peptidase family S41 DOM78_RS04000 PF13180 PDZ domain DOM78_RS04005 PF01259 SAICAR synthetase DOM78_RS04010 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase DOM78_RS04025 PF01553 Acyltransferase DOM78_RS04040 PF03129 Anticodon binding domain DOM78_RS04040 PF13393 Histidyl-tRNA synthetase DOM78_RS04055 PF13847 Methyltransferase domain DOM78_RS04055 PF00069 Protein kinase domain DOM78_RS04065 PF00456 Transketolase, thiamine diphosphate binding domain DOM78_RS04070 PF00456 Transketolase, thiamine diphosphate binding domain DOM78_RS04075 PF02780 Transketolase, C-terminal domain DOM78_RS04075 PF02779 Transketolase, pyrimidine binding domain DOM78_RS04080 PF00106 short chain dehydrogenase DOM78_RS04090 PF13847 Methyltransferase domain DOM78_RS04135 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DOM78_RS04140 PF01180 Dihydroorotate dehydrogenase DOM78_RS04145 PF05193 Peptidase M16 inactive domain DOM78_RS04145 PF00675 Insulinase (Peptidase family M16) DOM78_RS04150 PF00701 Dihydrodipicolinate synthetase family DOM78_RS04160 PF00795 Carbon-nitrogen hydrolase DOM78_RS04175 PF01235 Sodium:alanine symporter family DOM78_RS04185 PF01509 TruB family pseudouridylate synthase (N terminal domain) DOM78_RS04190 PF02599 Global regulator protein family DOM78_RS04195 PF00288 GHMP kinases N terminal domain DOM78_RS04200 PF01668 SmpB protein DOM78_RS04205 PF01618 MotA/TolQ/ExbB proton channel family DOM78_RS04210 PF02472 Biopolymer transport protein ExbD/TolR DOM78_RS04225 PF00468 Ribosomal protein L34 DOM78_RS04230 PF00825 Ribonuclease P DOM78_RS04235 PF01809 Putative membrane protein insertion efficiency factor DOM78_RS04240 PF14849 YidC periplasmic domain DOM78_RS04240 PF02096 60Kd inner membrane protein DOM78_RS04250 PF12631 MnmE helical domain DOM78_RS04250 PF01926 50S ribosome-binding GTPase DOM78_RS04250 PF10396 GTP-binding protein TrmE N-terminus DOM78_RS04265 PF00438 S-adenosylmethionine synthetase, N-terminal domain DOM78_RS04265 PF02772 S-adenosylmethionine synthetase, central domain DOM78_RS04265 PF02773 S-adenosylmethionine synthetase, C-terminal domain DOM78_RS04270 PF00460 Flagella basal body rod protein DOM78_RS04275 PF00460 Flagella basal body rod protein DOM78_RS04275 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DOM78_RS04280 PF02049 Flagellar hook-basal body complex protein FliE DOM78_RS04285 PF00905 Penicillin binding protein transpeptidase domain DOM78_RS04300 PF07670 Nucleoside recognition DOM78_RS04300 PF02421 Ferrous iron transport protein B DOM78_RS04300 PF07664 Ferrous iron transport protein B C terminus DOM78_RS04345 PF01554 MatE DOM78_RS04355 PF01230 HIT domain DOM78_RS04360 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DOM78_RS04360 PF01409 tRNA synthetases class II core domain (F) DOM78_RS04365 PF03484 tRNA synthetase B5 domain DOM78_RS04365 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DOM78_RS04365 PF01588 Putative tRNA binding domain DOM78_RS04365 PF03147 Ferredoxin-fold anticodon binding domain DOM78_RS04370 PF02779 Transketolase, pyrimidine binding domain DOM78_RS04370 PF02780 Transketolase, C-terminal domain DOM78_RS04370 PF00456 Transketolase, thiamine diphosphate binding domain DOM78_RS04390 PF01177 Asp/Glu/Hydantoin racemase DOM78_RS04395 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DOM78_RS04395 PF07498 Rho termination factor, N-terminal domain DOM78_RS04395 PF07497 Rho termination factor, RNA-binding domain DOM78_RS04400 PF00072 Response regulator receiver domain DOM78_RS04400 PF12833 Helix-turn-helix domain DOM78_RS04405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM78_RS04405 PF00512 His Kinase A (phospho-acceptor) domain DOM78_RS04415 PF01541 GIY-YIG catalytic domain DOM78_RS04415 PF08459 UvrC Helix-hairpin-helix N-terminal DOM78_RS04415 PF02151 UvrB/uvrC motif DOM78_RS04430 PF00890 FAD binding domain DOM78_RS04435 PF02646 RmuC family DOM78_RS04440 PF01967 MoaC family DOM78_RS04445 PF00994 Probable molybdopterin binding domain DOM78_RS04455 PF02391 MoaE protein DOM78_RS04465 PF03453 MoeA N-terminal region (domain I and II) DOM78_RS04465 PF03454 MoeA C-terminal region (domain IV) DOM78_RS04465 PF00994 Probable molybdopterin binding domain DOM78_RS04470 PF00925 GTP cyclohydrolase II DOM78_RS04475 PF09335 SNARE associated Golgi protein DOM78_RS04480 PF00484 Carbonic anhydrase DOM78_RS04485 PF00793 DAHP synthetase I family DOM78_RS04490 PF00885 6,7-dimethyl-8-ribityllumazine synthase DOM78_RS04495 PF01029 NusB family DOM78_RS04500 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DOM78_RS04505 PF02569 Pantoate-beta-alanine ligase DOM78_RS04530 PF01435 Peptidase family M48 DOM78_RS04540 PF01227 GTP cyclohydrolase I DOM78_RS04550 PF01925 Sulfite exporter TauE/SafE DOM78_RS04560 PF00072 Response regulator receiver domain DOM78_RS04560 PF00486 Transcriptional regulatory protein, C terminal DOM78_RS04565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM78_RS04570 PF03796 DnaB-like helicase C terminal domain DOM78_RS04570 PF00772 DnaB-like helicase N terminal domain DOM78_RS04580 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DOM78_RS04580 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DOM78_RS04580 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DOM78_RS04585 PF00132 Bacterial transferase hexapeptide (six repeats) DOM78_RS04590 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DOM78_RS04590 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DOM78_RS04605 PF00464 Serine hydroxymethyltransferase DOM78_RS04610 PF01336 OB-fold nucleic acid binding domain DOM78_RS04610 PF00152 tRNA synthetases class II (D, K and N) DOM78_RS04635 PF00155 Aminotransferase class I and II DOM78_RS04665 PF00700 Bacterial flagellin C-terminal helical region DOM78_RS04665 PF07196 Flagellin hook IN motif DOM78_RS04665 PF00669 Bacterial flagellin N-terminal helical region DOM78_RS04670 PF01131 DNA topoisomerase DOM78_RS04670 PF01751 Toprim domain DOM78_RS04670 PF01396 Topoisomerase DNA binding C4 zinc finger DOM78_RS04675 PF02811 PHP domain DOM78_RS04685 PF09186 Domain of unknown function (DUF1949) DOM78_RS04685 PF01205 Uncharacterized protein family UPF0029 DOM78_RS04690 PF03653 Uncharacterised protein family (UPF0093) DOM78_RS04695 PF14698 Argininosuccinate lyase C-terminal DOM78_RS04695 PF00206 Lyase DOM78_RS04700 PF01209 ubiE/COQ5 methyltransferase family DOM78_RS04705 PF06039 Malate:quinone oxidoreductase (Mqo) DOM78_RS04710 PF00815 Histidinol dehydrogenase DOM78_RS04725 PF00348 Polyprenyl synthetase DOM78_RS04730 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DOM78_RS04730 PF01488 Shikimate / quinate 5-dehydrogenase DOM78_RS04730 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DOM78_RS04735 PF03129 Anticodon binding domain DOM78_RS04735 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DOM78_RS04735 PF04073 Aminoacyl-tRNA editing domain DOM78_RS04740 PF03900 Porphobilinogen deaminase, C-terminal domain DOM78_RS04740 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DOM78_RS04745 PF03631 Virulence factor BrkB DOM78_RS04750 PF04055 Radical SAM superfamily DOM78_RS04750 PF06968 Biotin and Thiamin Synthesis associated domain DOM78_RS04755 PF02601 Exonuclease VII, large subunit DOM78_RS04755 PF13742 OB-fold nucleic acid binding domain DOM78_RS04765 PF00586 AIR synthase related protein, N-terminal domain DOM78_RS04765 PF02769 AIR synthase related protein, C-terminal domain DOM78_RS04775 PF00330 Aconitase family (aconitate hydratase) DOM78_RS04775 PF11791 Aconitate B N-terminal domain DOM78_RS04775 PF06434 Aconitate hydratase 2 N-terminus DOM78_RS04785 PF03144 Elongation factor Tu domain 2 DOM78_RS04785 PF00679 Elongation factor G C-terminus DOM78_RS04785 PF00009 Elongation factor Tu GTP binding domain DOM78_RS04790 PF00881 Nitroreductase family DOM78_RS04795 PF02867 Ribonucleotide reductase, barrel domain DOM78_RS04795 PF00317 Ribonucleotide reductase, all-alpha domain DOM78_RS04795 PF03477 ATP cone domain DOM78_RS04805 PF18025 Alpha-(1,3)-fucosyltransferase FucT N-terminal domain DOM78_RS04805 PF00852 Glycosyltransferase family 10 (fucosyltransferase) C-term DOM78_RS04810 PF00472 RF-1 domain DOM78_RS04810 PF03462 PCRF domain DOM78_RS04815 PF01649 Ribosomal protein S20 DOM78_RS04820 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DOM78_RS04820 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DOM78_RS04820 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DOM78_RS04820 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DOM78_RS04825 PF01252 Signal peptidase (SPase) II DOM78_RS04850 PF13726 Na+-H+ antiporter family DOM78_RS04850 PF03553 Na+/H+ antiporter family DOM78_RS04860 PF01118 Semialdehyde dehydrogenase, NAD binding domain DOM78_RS04860 PF02774 Semialdehyde dehydrogenase, dimerisation domain DOM78_RS04865 PF01208 Uroporphyrinogen decarboxylase (URO-D) DOM78_RS04870 PF03471 Transporter associated domain DOM78_RS04870 PF00571 CBS domain DOM78_RS04870 PF01595 Cyclin M transmembrane N-terminal domain DOM78_RS04875 PF01384 Phosphate transporter family DOM78_RS04880 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DOM78_RS04890 PF03480 Bacterial extracellular solute-binding protein, family 7 DOM78_RS04895 PF01106 NifU-like domain DOM78_RS04905 PF02875 Mur ligase family, glutamate ligase domain DOM78_RS04905 PF08245 Mur ligase middle domain DOM78_RS04915 PF08534 Redoxin DOM78_RS04920 PF13638 PIN domain DOM78_RS04920 PF02562 PhoH-like protein DOM78_RS04930 PF00877 NlpC/P60 family DOM78_RS04940 PF00391 PEP-utilising enzyme, mobile domain DOM78_RS04940 PF02896 PEP-utilising enzyme, TIM barrel domain DOM78_RS04940 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DOM78_RS04945 PF00586 AIR synthase related protein, N-terminal domain DOM78_RS04945 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DOM78_RS04945 PF02769 AIR synthase related protein, C-terminal domain DOM78_RS04955 PF02581 Thiamine monophosphate synthase DOM78_RS04970 PF04376 Arginine-tRNA-protein transferase, N terminus DOM78_RS04970 PF04377 Arginine-tRNA-protein transferase, C terminus DOM78_RS04975 PF01464 Transglycosylase SLT domain DOM78_RS04975 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain DOM78_RS04980 PF04055 Radical SAM superfamily DOM78_RS04985 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DOM78_RS04985 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DOM78_RS04990 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DOM78_RS04990 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DOM78_RS05000 PF01725 Ham1 family DOM78_RS05005 PF00691 OmpA family DOM78_RS05005 PF13488 Glycine zipper DOM78_RS05020 PF02666 Phosphatidylserine decarboxylase DOM78_RS05025 PF02445 Quinolinate synthetase A protein DOM78_RS05030 PF00814 Glycoprotease family DOM78_RS05035 PF04371 Porphyromonas-type peptidyl-arginine deiminase DOM78_RS05045 PF00589 Phage integrase family DOM78_RS05045 PF18644 Phage integrase SAM-like domain DOM78_RS05070 PF00719 Inorganic pyrophosphatase DOM78_RS05075 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DOM78_RS05075 PF00289 Biotin carboxylase, N-terminal domain DOM78_RS05075 PF02785 Biotin carboxylase C-terminal domain DOM78_RS05080 PF03853 YjeF-related protein N-terminus DOM78_RS05080 PF01256 Carbohydrate kinase DOM78_RS05085 PF05690 Thiazole biosynthesis protein ThiG DOM78_RS05090 PF13649 Methyltransferase domain DOM78_RS05115 PF03062 MBOAT, membrane-bound O-acyltransferase family DOM78_RS05125 PF12704 MacB-like periplasmic core domain DOM78_RS05125 PF02687 FtsX-like permease family DOM78_RS05125 PF00005 ABC transporter DOM78_RS05130 PF02687 FtsX-like permease family DOM78_RS05130 PF00005 ABC transporter DOM78_RS05130 PF12704 MacB-like periplasmic core domain DOM78_RS05135 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DOM78_RS05200 PF03129 Anticodon binding domain DOM78_RS05200 PF13393 Histidyl-tRNA synthetase DOM78_RS05210 PF01613 Flavin reductase like domain DOM78_RS05215 PF07687 Peptidase dimerisation domain DOM78_RS05215 PF01546 Peptidase family M20/M25/M40 DOM78_RS05225 PF00533 BRCA1 C Terminus (BRCT) domain DOM78_RS05225 PF03120 NAD-dependent DNA ligase OB-fold domain DOM78_RS05225 PF12826 Helix-hairpin-helix motif DOM78_RS05225 PF01653 NAD-dependent DNA ligase adenylation domain DOM78_RS05230 PF00072 Response regulator receiver domain DOM78_RS05230 PF01584 CheW-like domain DOM78_RS05235 PF00152 tRNA synthetases class II (D, K and N) DOM78_RS05235 PF02938 GAD domain DOM78_RS05235 PF01336 OB-fold nucleic acid binding domain DOM78_RS05265 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DOM78_RS05265 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DOM78_RS05275 PF00270 DEAD/DEAH box helicase DOM78_RS05275 PF00271 Helicase conserved C-terminal domain DOM78_RS05280 PF02683 Cytochrome C biogenesis protein transmembrane region DOM78_RS05285 PF01979 Amidohydrolase family DOM78_RS05290 PF00924 Mechanosensitive ion channel DOM78_RS05295 PF01979 Amidohydrolase family DOM78_RS05300 PF01451 Low molecular weight phosphotyrosine protein phosphatase DOM78_RS05320 PF00005 ABC transporter DOM78_RS05325 PF00950 ABC 3 transport family DOM78_RS05330 PF17402 Family of unknown function (DUF5408) DOM78_RS05335 PF02021 Uncharacterised protein family UPF0102 DOM78_RS05340 PF03447 Homoserine dehydrogenase, NAD binding domain DOM78_RS05340 PF00742 Homoserine dehydrogenase DOM78_RS05340 PF01842 ACT domain DOM78_RS05345 PF00155 Aminotransferase class I and II DOM78_RS05360 PF08032 RNA 2'-O ribose methyltransferase substrate binding DOM78_RS05360 PF00588 SpoU rRNA Methylase family DOM78_RS05365 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DOM78_RS05370 PF01197 Ribosomal protein L31 DOM78_RS05395 PF00183 Hsp90 protein DOM78_RS05400 PF17200 Single Cache domain 2 DOM78_RS05400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM78_RS05400 PF00672 HAMP domain DOM78_RS05405 PF00672 HAMP domain DOM78_RS05405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM78_RS05405 PF17200 Single Cache domain 2 DOM78_RS05425 PF02223 Thymidylate kinase DOM78_RS05430 PF01467 Cytidylyltransferase-like DOM78_RS05435 PF02441 Flavoprotein DOM78_RS05445 PF13361 UvrD-like helicase C-terminal domain DOM78_RS05445 PF00580 UvrD/REP helicase N-terminal domain DOM78_RS05460 PF00156 Phosphoribosyl transferase domain DOM78_RS05470 PF01555 DNA methylase DOM78_RS05480 PF00528 Binding-protein-dependent transport system inner membrane component DOM78_RS05485 PF00528 Binding-protein-dependent transport system inner membrane component DOM78_RS05490 PF00497 Bacterial extracellular solute-binding proteins, family 3 DOM78_RS05495 PF00005 ABC transporter DOM78_RS05525 PF00291 Pyridoxal-phosphate dependent enzyme DOM78_RS05530 PF00290 Tryptophan synthase alpha chain DOM78_RS05535 PF01641 SelR domain DOM78_RS05545 PF02040 Arsenical pump membrane protein DOM78_RS05555 PF00117 Glutamine amidotransferase class-I DOM78_RS05555 PF00958 GMP synthase C terminal domain DOM78_RS05565 PF07669 Eco57I restriction-modification methylase DOM78_RS05565 PF02384 N-6 DNA Methylase DOM78_RS05580 PF13735 tRNA nucleotidyltransferase domain 2 putative DOM78_RS05580 PF12627 Probable RNA and SrmB- binding site of polymerase A DOM78_RS05580 PF01743 Poly A polymerase head domain DOM78_RS05585 PF01494 FAD binding domain DOM78_RS05590 PF00465 Iron-containing alcohol dehydrogenase DOM78_RS05595 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DOM78_RS05595 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DOM78_RS05615 PF00483 Nucleotidyl transferase DOM78_RS05620 PF00551 Formyl transferase DOM78_RS05620 PF02911 Formyl transferase, C-terminal domain DOM78_RS05630 PF07722 Peptidase C26 DOM78_RS05635 PF00391 PEP-utilising enzyme, mobile domain DOM78_RS05635 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DOM78_RS05640 PF03848 Tellurite resistance protein TehB DOM78_RS05645 PF02096 60Kd inner membrane protein DOM78_RS05645 PF14849 YidC periplasmic domain DOM78_RS05665 PF00460 Flagella basal body rod protein DOM78_RS05665 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DOM78_RS05665 PF07196 Flagellin hook IN motif DOM78_RS05665 PF07559 Flagellar basal body protein FlaE DOM78_RS05675 PF01479 S4 domain DOM78_RS05685 PF01678 Diaminopimelate epimerase DOM78_RS05690 PF01121 Dephospho-CoA kinase DOM78_RS05695 PF17284 Spermidine synthase tetramerisation domain DOM78_RS05700 PF00486 Transcriptional regulatory protein, C terminal DOM78_RS05700 PF00072 Response regulator receiver domain DOM78_RS05715 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DOM78_RS05715 PF02142 MGS-like domain DOM78_RS05715 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DOM78_RS05730 PF01842 ACT domain DOM78_RS05730 PF00551 Formyl transferase DOM78_RS05735 PF01343 Peptidase family S49 DOM78_RS05740 PF01042 Endoribonuclease L-PSP DOM78_RS05755 PF02436 Conserved carboxylase domain DOM78_RS05755 PF00364 Biotin-requiring enzyme DOM78_RS05755 PF00682 HMGL-like DOM78_RS05760 PF03883 Peroxide stress protein YaaA DOM78_RS05775 PF01168 Alanine racemase, N-terminal domain DOM78_RS05780 PF17820 PDZ domain DOM78_RS05780 PF02163 Peptidase family M50 DOM78_RS05785 PF01066 CDP-alcohol phosphatidyltransferase DOM78_RS05790 PF01544 CorA-like Mg2+ transporter protein DOM78_RS05795 PF03741 Integral membrane protein TerC family DOM78_RS05830 PF05681 Fumarate hydratase (Fumerase) DOM78_RS05840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DOM78_RS05840 PF00005 ABC transporter DOM78_RS05845 PF12911 N-terminal TM domain of oligopeptide transport permease C DOM78_RS05845 PF00528 Binding-protein-dependent transport system inner membrane component DOM78_RS05850 PF00528 Binding-protein-dependent transport system inner membrane component DOM78_RS05855 PF04328 Selenoprotein, putative DOM78_RS05870 PF13722 5TM C-terminal transporter carbon starvation CstA DOM78_RS05870 PF02554 Carbon starvation protein CstA DOM78_RS05880 PF00218 Indole-3-glycerol phosphate synthase DOM78_RS05885 PF09587 Bacterial capsule synthesis protein PGA_cap DOM78_RS05895 PF01814 Hemerythrin HHE cation binding domain DOM78_RS05900 PF01351 Ribonuclease HII DOM78_RS05905 PF00497 Bacterial extracellular solute-binding proteins, family 3 DOM78_RS05910 PF00528 Binding-protein-dependent transport system inner membrane component DOM78_RS05915 PF00005 ABC transporter DOM78_RS05925 PF01018 GTP1/OBG DOM78_RS05925 PF01926 50S ribosome-binding GTPase DOM78_RS05930 PF00535 Glycosyl transferase family 2 DOM78_RS05930 PF01501 Glycosyl transferase family 8 DOM78_RS05940 PF01016 Ribosomal L27 protein DOM78_RS05945 PF00829 Ribosomal prokaryotic L21 protein DOM78_RS05955 PF16363 GDP-mannose 4,6 dehydratase DOM78_RS05965 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DOM78_RS06025 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DOM78_RS06025 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DOM78_RS06060 PF03102 NeuB family DOM78_RS06060 PF08666 SAF domain DOM78_RS06070 PF02350 UDP-N-acetylglucosamine 2-epimerase DOM78_RS06115 PF02350 UDP-N-acetylglucosamine 2-epimerase DOM78_RS06120 PF02585 GlcNAc-PI de-N-acetylase DOM78_RS06125 PF02350 UDP-N-acetylglucosamine 2-epimerase DOM78_RS06130 PF00027 Cyclic nucleotide-binding domain DOM78_RS06130 PF13545 Crp-like helix-turn-helix domain DOM78_RS06135 PF13932 GidA associated domain DOM78_RS06135 PF01134 Glucose inhibited division protein A DOM78_RS06145 PF03738 Glutathionylspermidine synthase preATP-grasp DOM78_RS06150 PF00884 Sulfatase DOM78_RS06150 PF08019 Phosphoethanolamine transferase EptA/EptB DOM78_RS06155 PF00085 Thioredoxin DOM78_RS06160 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DOM78_RS06160 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal DOM78_RS06160 PF10518 TAT (twin-arginine translocation) pathway signal sequence DOM78_RS06165 PF00374 Nickel-dependent hydrogenase DOM78_RS06170 PF01292 Prokaryotic cytochrome b561 DOM78_RS06175 PF01750 Hydrogenase maturation protease DOM78_RS06190 PF01053 Cys/Met metabolism PLP-dependent enzyme DOM78_RS06200 PF04556 DpnII restriction endonuclease DOM78_RS06210 PF00291 Pyridoxal-phosphate dependent enzyme DOM78_RS06245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM78_RS06245 PF08447 PAS fold DOM78_RS06245 PF13426 PAS domain DOM78_RS06270 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DOM78_RS06285 PF16363 GDP-mannose 4,6 dehydratase DOM78_RS06290 PF00483 Nucleotidyl transferase DOM78_RS06295 PF00679 Elongation factor G C-terminus DOM78_RS06295 PF06421 GTP-binding protein LepA C-terminus DOM78_RS06295 PF03144 Elongation factor Tu domain 2 DOM78_RS06295 PF00009 Elongation factor Tu GTP binding domain DOM78_RS06305 PF01938 TRAM domain DOM78_RS06305 PF05958 tRNA (Uracil-5-)-methyltransferase DOM78_RS06320 PF08241 Methyltransferase domain DOM78_RS06325 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DOM78_RS06330 PF00483 Nucleotidyl transferase DOM78_RS06350 PF13472 GDSL-like Lipase/Acylhydrolase family DOM78_RS06350 PF02348 Cytidylyltransferase DOM78_RS06360 PF02348 Cytidylyltransferase DOM78_RS06365 PF00106 short chain dehydrogenase DOM78_RS06380 PF02348 Cytidylyltransferase DOM78_RS06380 PF13472 GDSL-like Lipase/Acylhydrolase family DOM78_RS06390 PF00202 Aminotransferase class-III DOM78_RS06405 PF13649 Methyltransferase domain DOM78_RS06405 PF08241 Methyltransferase domain DOM78_RS06420 PF01098 Cell cycle protein DOM78_RS06435 PF00639 PPIC-type PPIASE domain DOM78_RS06440 PF01116 Fructose-bisphosphate aldolase class-II DOM78_RS06445 PF09285 Elongation factor P, C-terminal DOM78_RS06445 PF01132 Elongation factor P (EF-P) OB domain DOM78_RS06445 PF08207 Elongation factor P (EF-P) KOW-like domain DOM78_RS06450 PF03498 Cytolethal distending toxin A/C domain DOM78_RS06455 PF03372 Endonuclease/Exonuclease/phosphatase family DOM78_RS06460 PF03498 Cytolethal distending toxin A/C domain DOM78_RS06470 PF00004 ATPase family associated with various cellular activities (AAA) DOM78_RS06470 PF17871 AAA lid domain DOM78_RS06470 PF02861 Clp amino terminal domain, pathogenicity island component DOM78_RS06470 PF10431 C-terminal, D2-small domain, of ClpB protein DOM78_RS06470 PF07724 AAA domain (Cdc48 subfamily) DOM78_RS06485 PF01926 50S ribosome-binding GTPase DOM78_RS06485 PF06071 Protein of unknown function (DUF933) DOM78_RS06490 PF02789 Cytosol aminopeptidase family, N-terminal domain DOM78_RS06490 PF00883 Cytosol aminopeptidase family, catalytic domain DOM78_RS06500 PF00156 Phosphoribosyl transferase domain DOM78_RS06510 PF02502 Ribose/Galactose Isomerase DOM78_RS06515 PF10502 Signal peptidase, peptidase S26 DOM78_RS06520 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DOM78_RS06520 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DOM78_RS06530 PF00700 Bacterial flagellin C-terminal helical region DOM78_RS06530 PF00669 Bacterial flagellin N-terminal helical region DOM78_RS06530 PF07196 Flagellin hook IN motif DOM78_RS06535 PF03061 Thioesterase superfamily DOM78_RS06555 PF07549 SecD/SecF GG Motif DOM78_RS06555 PF02355 Protein export membrane protein DOM78_RS06560 PF02355 Protein export membrane protein DOM78_RS06565 PF02699 Preprotein translocase subunit DOM78_RS06570 PF06965 Na+/H+ antiporter 1 DOM78_RS06575 PF06965 Na+/H+ antiporter 1 DOM78_RS06580 PF00580 UvrD/REP helicase N-terminal domain DOM78_RS06580 PF13361 UvrD-like helicase C-terminal domain DOM78_RS06585 PF00226 DnaJ domain DOM78_RS06585 PF00684 DnaJ central domain DOM78_RS06585 PF01556 DnaJ C terminal domain DOM78_RS06590 PF13411 MerR HTH family regulatory protein DOM78_RS06595 PF12002 MgsA AAA+ ATPase C terminal DOM78_RS06595 PF05496 Holliday junction DNA helicase RuvB P-loop domain DOM78_RS06595 PF16193 AAA C-terminal domain DOM78_RS06610 PF00158 Sigma-54 interaction domain DOM78_RS06610 PF00072 Response regulator receiver domain DOM78_RS06620 PF00521 DNA gyrase/topoisomerase IV, subunit A DOM78_RS06620 PF03989 DNA gyrase C-terminal domain, beta-propeller DOM78_RS06625 PF01810 LysE type translocator DOM78_RS06635 PF01230 HIT domain DOM78_RS06640 PF08245 Mur ligase middle domain DOM78_RS06640 PF01225 Mur ligase family, catalytic domain DOM78_RS06640 PF02875 Mur ligase family, glutamate ligase domain DOM78_RS06645 PF00708 Acylphosphatase DOM78_RS06655 PF07478 D-ala D-ala ligase C-terminus DOM78_RS06655 PF01820 D-ala D-ala ligase N-terminus DOM78_RS06660 PF17760 UvrA interaction domain DOM78_RS06660 PF17755 UvrA DNA-binding domain DOM78_RS06660 PF00005 ABC transporter DOM78_RS06665 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DOM78_RS06665 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DOM78_RS06665 PF01842 ACT domain DOM78_RS06675 PF00575 S1 RNA binding domain DOM78_RS06680 PF02401 LytB protein DOM78_RS06685 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DOM78_RS06690 PF03313 Serine dehydratase alpha chain DOM78_RS06690 PF03315 Serine dehydratase beta chain DOM78_RS06695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM78_RS06695 PF00512 His Kinase A (phospho-acceptor) domain DOM78_RS06705 PF02119 Flagellar P-ring protein DOM78_RS06785 PF13099 Domain of unknown function (DUF3944) DOM78_RS06785 PF03981 Ubiquinol-cytochrome C chaperone DOM78_RS06825 PF17757 UvrB interaction domain DOM78_RS06825 PF00271 Helicase conserved C-terminal domain DOM78_RS06825 PF02559 CarD-like/TRCF domain DOM78_RS06825 PF03461 TRCF domain DOM78_RS06825 PF00270 DEAD/DEAH box helicase DOM78_RS06835 PF04225 Opacity-associated protein A LysM-like domain DOM78_RS06835 PF01551 Peptidase family M23 DOM78_RS06860 PF00133 tRNA synthetases class I (I, L, M and V) DOM78_RS06860 PF13603 Leucyl-tRNA synthetase, Domain 2 DOM78_RS06860 PF09334 tRNA synthetases class I (M) DOM78_RS06935 PF00589 Phage integrase family DOM78_RS06935 PF13356 Arm DNA-binding domain DOM78_RS07015 PF09827 CRISPR associated protein Cas2 DOM78_RS07020 PF01867 CRISPR associated protein Cas1 DOM78_RS07025 PF13395 HNH endonuclease DOM78_RS07025 PF18541 RuvC endonuclease subdomain 3 DOM78_RS07060 PF18273 Type III R-M EcoP15I C-terminal domain DOM78_RS07060 PF01555 DNA methylase DOM78_RS07090 PF05638 Type VI secretion system effector, Hcp DOM78_RS07280 PF01555 DNA methylase DOM78_RS07415 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath DOM78_RS07455 PF05638 Type VI secretion system effector, Hcp DOM78_RS07460 PF04717 Type VI secretion system, phage-baseplate injector DOM78_RS07485 PF04717 Type VI secretion system, phage-baseplate injector DOM78_RS07545 PF04717 Type VI secretion system, phage-baseplate injector DOM78_RS07615 PF04717 Type VI secretion system, phage-baseplate injector DOM78_RS07645 PF04717 Type VI secretion system, phage-baseplate injector DOM78_RS07665 PF04717 Type VI secretion system, phage-baseplate injector DOM78_RS07890 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath DOM78_RS07935 PF12728 Helix-turn-helix domain DOM78_RS07935 PF02661 Fic/DOC family DOM78_RS08100 PF02086 D12 class N6 adenine-specific DNA methyltransferase DOM78_RS08105 PF02086 D12 class N6 adenine-specific DNA methyltransferase DOM78_RS08150 PF01914 MarC family integral membrane protein DOM78_RS08155 PF00771 FHIPEP family DOM78_RS08170 PF00551 Formyl transferase DOM78_RS08175 PF02080 TrkA-C domain DOM78_RS08175 PF02254 TrkA-N domain DOM78_RS08175 PF00999 Sodium/hydrogen exchanger family DOM78_RS08180 PF00209 Sodium:neurotransmitter symporter family DOM78_RS08185 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DOM78_RS08190 PF00005 ABC transporter DOM78_RS08190 PF00664 ABC transporter transmembrane region DOM78_RS08195 PF01434 Peptidase family M41 DOM78_RS08195 PF06480 FtsH Extracellular DOM78_RS08195 PF00004 ATPase family associated with various cellular activities (AAA) DOM78_RS08195 PF17862 AAA+ lid domain DOM78_RS08205 PF01808 AICARFT/IMPCHase bienzyme DOM78_RS08205 PF02142 MGS-like domain DOM78_RS08220 PF00117 Glutamine amidotransferase class-I DOM78_RS08225 PF07992 Pyridine nucleotide-disulphide oxidoreductase DOM78_RS08230 PF01113 Dihydrodipicolinate reductase, N-terminus DOM78_RS08230 PF05173 Dihydrodipicolinate reductase, C-terminus DOM78_RS08235 PF00156 Phosphoribosyl transferase domain DOM78_RS08240 PF04055 Radical SAM superfamily DOM78_RS08240 PF16199 Radical_SAM C-terminal domain DOM78_RS08245 PF00342 Phosphoglucose isomerase DOM78_RS08250 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DOM78_RS08250 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DOM78_RS08260 PF13090 Polyphosphate kinase C-terminal domain 2 DOM78_RS08260 PF17941 Polyphosphate kinase C-terminal domain 1 DOM78_RS08260 PF13089 Polyphosphate kinase N-terminal domain DOM78_RS08260 PF02503 Polyphosphate kinase middle domain DOM78_RS08270 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DOM78_RS08275 PF00572 Ribosomal protein L13 DOM78_RS08280 PF00380 Ribosomal protein S9/S16 DOM78_RS08290 PF01618 MotA/TolQ/ExbB proton channel family DOM78_RS08295 PF00691 OmpA family DOM78_RS08295 PF13677 Membrane MotB of proton-channel complex MotA/MotB DOM78_RS08310 PF00679 Elongation factor G C-terminus DOM78_RS08310 PF14492 Elongation Factor G, domain II DOM78_RS08310 PF03764 Elongation factor G, domain IV DOM78_RS08310 PF00009 Elongation factor Tu GTP binding domain DOM78_RS08310 PF03144 Elongation factor Tu domain 2 DOM78_RS08315 PF00177 Ribosomal protein S7p/S5e DOM78_RS08320 PF00164 Ribosomal protein S12/S23 DOM78_RS08325 PF04997 RNA polymerase Rpb1, domain 1 DOM78_RS08325 PF00623 RNA polymerase Rpb1, domain 2 DOM78_RS08325 PF04983 RNA polymerase Rpb1, domain 3 DOM78_RS08325 PF05000 RNA polymerase Rpb1, domain 4 DOM78_RS08325 PF04998 RNA polymerase Rpb1, domain 5 DOM78_RS08325 PF04563 RNA polymerase beta subunit DOM78_RS08325 PF04561 RNA polymerase Rpb2, domain 2 DOM78_RS08325 PF04565 RNA polymerase Rpb2, domain 3 DOM78_RS08325 PF10385 RNA polymerase beta subunit external 1 domain DOM78_RS08325 PF00562 RNA polymerase Rpb2, domain 6 DOM78_RS08325 PF04560 RNA polymerase Rpb2, domain 7 DOM78_RS08330 PF16320 Ribosomal protein L7/L12 dimerisation domain DOM78_RS08330 PF00542 Ribosomal protein L7/L12 C-terminal domain DOM78_RS08335 PF00466 Ribosomal protein L10 DOM78_RS08340 PF00687 Ribosomal protein L1p/L10e family DOM78_RS08345 PF00298 Ribosomal protein L11, RNA binding domain DOM78_RS08345 PF03946 Ribosomal protein L11, N-terminal domain DOM78_RS08350 PF02357 Transcription termination factor nusG DOM78_RS08365 PF00471 Ribosomal protein L33 DOM78_RS08370 PF03144 Elongation factor Tu domain 2 DOM78_RS08370 PF03143 Elongation factor Tu C-terminal domain DOM78_RS08370 PF00009 Elongation factor Tu GTP binding domain DOM78_RS08425 PF00155 Aminotransferase class I and II DOM78_RS08430 PF01225 Mur ligase family, catalytic domain DOM78_RS08430 PF02875 Mur ligase family, glutamate ligase domain DOM78_RS08430 PF08245 Mur ligase middle domain DOM78_RS08440 PF00488 MutS domain V DOM78_RS08440 PF01713 Smr domain DOM78_RS08455 PF17200 Single Cache domain 2 DOM78_RS08455 PF00672 HAMP domain DOM78_RS08455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM78_RS08460 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DOM78_RS08470 PF02785 Biotin carboxylase C-terminal domain DOM78_RS08470 PF00289 Biotin carboxylase, N-terminal domain DOM78_RS08470 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DOM78_RS08475 PF00364 Biotin-requiring enzyme DOM78_RS08480 PF00692 dUTPase DOM78_RS08500 PF03963 Flagellar hook capping protein - N-terminal region DOM78_RS08500 PF13860 FlgD Ig-like domain DOM78_RS08500 PF13861 FlgD Tudor-like domain DOM78_RS08505 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DOM78_RS08505 PF07559 Flagellar basal body protein FlaE DOM78_RS08505 PF00460 Flagella basal body rod protein DOM78_RS08525 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system DOM78_RS08595 PF00588 SpoU rRNA Methylase family DOM78_RS08600 PF03605 Anaerobic c4-dicarboxylate membrane transporter DOM78_RS08605 PF01370 NAD dependent epimerase/dehydratase family DOM78_RS08610 PF03972 MmgE/PrpD family DOM78_RS08615 PF00285 Citrate synthase, C-terminal domain DOM78_RS08625 PF00501 AMP-binding enzyme DOM78_RS08625 PF16177 Acetyl-coenzyme A synthetase N-terminus DOM78_RS08625 PF13193 AMP-binding enzyme C-terminal domain DOM78_RS08635 PF17954 Quercetinase C-terminal cupin domain DOM78_RS08635 PF02678 Pirin DOM78_RS08640 PF00873 AcrB/AcrD/AcrF family DOM78_RS08645 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DOM78_RS08650 PF02664 S-Ribosylhomocysteinase (LuxS) DOM78_RS08660 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DOM78_RS08660 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DOM78_RS08665 PF00696 Amino acid kinase family DOM78_RS08675 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal DOM78_RS08675 PF10518 TAT (twin-arginine translocation) pathway signal sequence DOM78_RS08675 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DOM78_RS08680 PF04608 Phosphatidylglycerophosphatase A DOM78_RS08690 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DOM78_RS08690 PF02542 YgbB family DOM78_RS08695 PF01964 Radical SAM ThiC family DOM78_RS08725 PF00730 HhH-GPD superfamily base excision DNA repair protein DOM78_RS08725 PF00633 Helix-hairpin-helix motif DOM78_RS08730 PF04023 FeoA domain DOM78_RS08760 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DOM78_RS08760 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DOM78_RS08760 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DOM78_RS08765 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DOM78_RS08775 PF02617 ATP-dependent Clp protease adaptor protein ClpS DOM78_RS08780 PF10431 C-terminal, D2-small domain, of ClpB protein DOM78_RS08780 PF02861 Clp amino terminal domain, pathogenicity island component DOM78_RS08780 PF17871 AAA lid domain DOM78_RS08780 PF07724 AAA domain (Cdc48 subfamily) DOM78_RS08780 PF00004 ATPase family associated with various cellular activities (AAA) DOM78_RS08800 PF00106 short chain dehydrogenase DOM78_RS08805 PF01474 Class-II DAHP synthetase family DOM78_RS08810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM78_RS08810 PF00672 HAMP domain DOM78_RS08810 PF17200 Single Cache domain 2 DOM78_RS08815 PF17864 RuvB AAA lid domain DOM78_RS08815 PF05496 Holliday junction DNA helicase RuvB P-loop domain DOM78_RS08815 PF05491 RuvB C-terminal winged helix domain DOM78_RS08820 PF02548 Ketopantoate hydroxymethyltransferase DOM78_RS08825 PF00893 Small Multidrug Resistance protein DOM78_RS08835 PF01790 Prolipoprotein diacylglyceryl transferase DOM78_RS08850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM78_RS08850 PF02743 Cache domain DOM78_RS08850 PF00672 HAMP domain DOM78_RS08855 PF01330 RuvA N terminal domain DOM78_RS08855 PF07499 RuvA, C-terminal domain DOM78_RS08865 PF03023 Lipid II flippase MurJ DOM78_RS08870 PF01406 tRNA synthetases class I (C) catalytic domain DOM78_RS08875 PF01687 Riboflavin kinase DOM78_RS08875 PF06574 FAD synthetase DOM78_RS08880 PF01479 S4 domain DOM78_RS08880 PF01728 FtsJ-like methyltransferase DOM78_RS08890 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DOM78_RS08890 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DOM78_RS08905 PF13288 DXP reductoisomerase C-terminal domain DOM78_RS08905 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DOM78_RS08905 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DOM78_RS08910 PF01546 Peptidase family M20/M25/M40 DOM78_RS08910 PF07687 Peptidase dimerisation domain DOM78_RS09095 PF01625 Peptide methionine sulfoxide reductase DOM78_RS09100 PF03841 L-seryl-tRNA selenium transferase DOM78_RS09105 PF09106 Elongation factor SelB, winged helix DOM78_RS09105 PF09107 Elongation factor SelB, winged helix DOM78_RS09105 PF00009 Elongation factor Tu GTP binding domain DOM78_RS09105 PF03144 Elongation factor Tu domain 2 DOM78_RS09115 PF03454 MoeA C-terminal region (domain IV) DOM78_RS09115 PF00994 Probable molybdopterin binding domain DOM78_RS09115 PF03453 MoeA N-terminal region (domain I and II) DOM78_RS09120 PF00582 Universal stress protein family DOM78_RS09130 PF00535 Glycosyl transferase family 2 DOM78_RS09150 PF00884 Sulfatase DOM78_RS09155 PF01165 Ribosomal protein S21 DOM78_RS09175 PF12327 FtsZ family, C-terminal domain DOM78_RS09175 PF00091 Tubulin/FtsZ family, GTPase domain DOM78_RS09180 PF02491 SHS2 domain inserted in FTSA DOM78_RS09195 PF01098 Cell cycle protein DOM78_RS09200 PF00849 RNA pseudouridylate synthase DOM78_RS09200 PF01479 S4 domain DOM78_RS09210 PF02390 Putative methyltransferase DOM78_RS09215 PF00005 ABC transporter DOM78_RS09235 PF02465 Flagellar hook-associated protein 2 N-terminus DOM78_RS09235 PF07195 Flagellar hook-associated protein 2 C-terminus DOM78_RS09240 PF02561 Flagellar protein FliS DOM78_RS09250 PF00216 Bacterial DNA-binding protein DOM78_RS09255 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DOM78_RS09255 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DOM78_RS09265 PF02934 GatB/GatE catalytic domain DOM78_RS09265 PF02637 GatB domain DOM78_RS09310 PF00171 Aldehyde dehydrogenase family DOM78_RS09315 PF04551 GcpE protein DOM78_RS09320 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DOM78_RS09330 PF02684 Lipid-A-disaccharide synthetase DOM78_RS09335 PF00535 Glycosyl transferase family 2 DOM78_RS09365 PF00892 EamA-like transporter family DOM78_RS09370 PF00209 Sodium:neurotransmitter symporter family DOM78_RS09395 PF08267 Cobalamin-independent synthase, N-terminal domain DOM78_RS09395 PF01717 Cobalamin-independent synthase, Catalytic domain DOM78_RS09410 PF02684 Lipid-A-disaccharide synthetase DOM78_RS09415 PF00083 Sugar (and other) transporter DOM78_RS09420 PF01717 Cobalamin-independent synthase, Catalytic domain DOM78_RS09420 PF08267 Cobalamin-independent synthase, N-terminal domain DOM78_RS09425 PF02253 Phospholipase A1 DOM78_RS09435 PF01380 SIS domain DOM78_RS09445 PF01145 SPFH domain / Band 7 family DOM78_RS09475 PF01555 DNA methylase DOM78_RS09480 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DOM78_RS09480 PF01411 tRNA synthetases class II (A) DOM78_RS09480 PF02272 DHHA1 domain DOM78_RS09485 PF01569 PAP2 superfamily DOM78_RS09490 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DOM78_RS09495 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DOM78_RS09500 PF10369 Small subunit of acetolactate synthase DOM78_RS09505 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DOM78_RS09505 PF00205 Thiamine pyrophosphate enzyme, central domain DOM78_RS09505 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DOM78_RS09510 PF07690 Major Facilitator Superfamily DOM78_RS09515 PF00037 4Fe-4S binding domain DOM78_RS09525 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DOM78_RS09525 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DOM78_RS09525 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DOM78_RS09545 PF01565 FAD binding domain DOM78_RS09545 PF02913 FAD linked oxidases, C-terminal domain DOM78_RS09550 PF15437 Plasminogen-binding protein pgbA C-terminal DOM78_RS09550 PF15436 Plasminogen-binding protein pgbA N-terminal DOM78_RS09560 PF10145 Phage-related minor tail protein DOM78_RS09560 PF01551 Peptidase family M23 DOM78_RS09560 PF01464 Transglycosylase SLT domain DOM78_RS09580 PF07196 Flagellin hook IN motif DOM78_RS09580 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DOM78_RS09595 PF00004 ATPase family associated with various cellular activities (AAA) DOM78_RS09595 PF01434 Peptidase family M41 DOM78_RS09595 PF17862 AAA+ lid domain DOM78_RS09600 PF04055 Radical SAM superfamily DOM78_RS09600 PF00919 Uncharacterized protein family UPF0004 DOM78_RS09610 PF01761 3-dehydroquinate synthase DOM78_RS09630 PF03061 Thioesterase superfamily DOM78_RS09635 PF01555 DNA methylase DOM78_RS09690 PF00953 Glycosyl transferase family 4 DOM78_RS09695 PF00239 Resolvase, N terminal domain DOM78_RS09695 PF02796 Helix-turn-helix domain of resolvase DOM78_RS09700 PF00953 Glycosyl transferase family 4 DOM78_RS09710 PF00209 Sodium:neurotransmitter symporter family DOM78_RS09715 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DOM78_RS09715 PF00117 Glutamine amidotransferase class-I DOM78_RS09725 PF00905 Penicillin binding protein transpeptidase domain DOM78_RS09725 PF00912 Transglycosylase DOM78_RS09730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM78_RS09730 PF13426 PAS domain DOM78_RS09730 PF08447 PAS fold DOM78_RS09735 PF01475 Ferric uptake regulator family DOM78_RS09755 PF13291 ACT domain DOM78_RS09755 PF00291 Pyridoxal-phosphate dependent enzyme DOM78_RS09760 PF00892 EamA-like transporter family DOM78_RS09765 PF02107 Flagellar L-ring protein DOM78_RS09770 PF02348 Cytidylyltransferase DOM78_RS09790 PF00266 Aminotransferase class-V DOM78_RS09795 PF08666 SAF domain DOM78_RS09795 PF03102 NeuB family DOM78_RS09805 PF17792 ThiD2 family DOM78_RS09805 PF02581 Thiamine monophosphate synthase DOM78_RS09810 PF01027 Inhibitor of apoptosis-promoting Bax1 DOM78_RS09815 PF12801 4Fe-4S binding domain DOM78_RS09815 PF13746 4Fe-4S dicluster domain DOM78_RS09815 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase DOM78_RS09820 PF01531 Glycosyl transferase family 11 DOM78_RS09825 PF00005 ABC transporter DOM78_RS09825 PF12848 ABC transporter DOM78_RS09835 PF00145 C-5 cytosine-specific DNA methylase DOM78_RS09850 PF01546 Peptidase family M20/M25/M40 DOM78_RS09850 PF07687 Peptidase dimerisation domain DOM78_RS09855 PF02774 Semialdehyde dehydrogenase, dimerisation domain DOM78_RS09855 PF01118 Semialdehyde dehydrogenase, NAD binding domain DOM78_RS09865 PF00072 Response regulator receiver domain DOM78_RS09865 PF01584 CheW-like domain DOM78_RS09870 PF01584 CheW-like domain DOM78_RS09870 PF02895 Signal transducing histidine kinase, homodimeric domain DOM78_RS09870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM78_RS09870 PF00072 Response regulator receiver domain DOM78_RS09870 PF01627 Hpt domain DOM78_RS09875 PF01584 CheW-like domain DOM78_RS09900 PF01050 Mannose-6-phosphate isomerase DOM78_RS09900 PF00483 Nucleotidyl transferase DOM78_RS09905 PF14743 DNA ligase OB-like domain DOM78_RS09905 PF01068 ATP dependent DNA ligase domain DOM78_RS09910 PF00334 Nucleoside diphosphate kinase DOM78_RS09920 PF01783 Ribosomal L32p protein family DOM78_RS09925 PF02504 Fatty acid synthesis protein DOM78_RS09930 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DOM78_RS09930 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DOM78_RS09935 PF00403 Heavy-metal-associated domain DOM78_RS09940 PF00403 Heavy-metal-associated domain DOM78_RS09950 PF01702 Queuine tRNA-ribosyltransferase DOM78_RS09955 PF13018 Extended Signal Peptide of Type V secretion system DOM78_RS09955 PF02395 Immunoglobulin A1 protease DOM78_RS09955 PF03797 Autotransporter beta-domain DOM78_RS09965 PF00403 Heavy-metal-associated domain DOM78_RS09970 PF00403 Heavy-metal-associated domain DOM78_RS09975 PF00664 ABC transporter transmembrane region DOM78_RS09975 PF00005 ABC transporter DOM78_RS09980 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DOM78_RS09985 PF02910 Fumarate reductase flavoprotein C-term DOM78_RS09985 PF00890 FAD binding domain DOM78_RS09990 PF13085 2Fe-2S iron-sulfur cluster binding domain DOM78_RS09990 PF13183 4Fe-4S dicluster domain DOM78_RS09995 PF13091 PLD-like domain DOM78_RS10010 PF01960 ArgJ family DOM78_RS10020 PF00830 Ribosomal L28 family DOM78_RS10025 PF13533 Biotin-lipoyl like DOM78_RS10055 PF01048 Phosphorylase superfamily DOM78_RS10060 PF00698 Acyl transferase domain DOM78_RS10080 PF01795 MraW methylase family DOM78_RS10105 PF00919 Uncharacterized protein family UPF0004 DOM78_RS10105 PF04055 Radical SAM superfamily DOM78_RS10115 PF00384 Molybdopterin oxidoreductase DOM78_RS10115 PF18364 Molybdopterin oxidoreductase N-terminal domain DOM78_RS10115 PF01568 Molydopterin dinucleotide binding domain DOM78_RS10135 PF00709 Adenylosuccinate synthetase DOM78_RS10140 PF13393 Histidyl-tRNA synthetase DOM78_RS10150 PF07715 TonB-dependent Receptor Plug Domain DOM78_RS10150 PF00593 TonB dependent receptor DOM78_RS10155 PF00206 Lyase DOM78_RS10155 PF10415 Fumarase C C-terminus DOM78_RS10160 PF03605 Anaerobic c4-dicarboxylate membrane transporter DOM78_RS10185 PF00625 Guanylate kinase DOM78_RS10190 PF02416 mttA/Hcf106 family DOM78_RS10195 PF00750 tRNA synthetases class I (R) DOM78_RS10195 PF05746 DALR anticodon binding domain DOM78_RS10195 PF03485 Arginyl tRNA synthetase N terminal domain DOM78_RS10200 PF03591 AzlC protein DOM78_RS10205 PF05437 Branched-chain amino acid transport protein (AzlD) DOM78_RS10210 PF00258 Flavodoxin DOM78_RS10215 PF07715 TonB-dependent Receptor Plug Domain DOM78_RS10220 PF03150 Di-haem cytochrome c peroxidase DOM78_RS10225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM78_RS10235 PF03180 NLPA lipoprotein DOM78_RS10240 PF03180 NLPA lipoprotein DOM78_RS10245 PF00528 Binding-protein-dependent transport system inner membrane component DOM78_RS10250 PF09383 NIL domain DOM78_RS10250 PF00005 ABC transporter DOM78_RS10255 PF01479 S4 domain DOM78_RS10255 PF00849 RNA pseudouridylate synthase DOM78_RS10270 PF14602 Hexapeptide repeat of succinyl-transferase DOM78_RS10270 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle DOM78_RS10285 PF00202 Aminotransferase class-III DOM78_RS10305 PF00202 Aminotransferase class-III DOM78_RS10315 PF00672 HAMP domain DOM78_RS10315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM78_RS10315 PF17200 Single Cache domain 2 DOM78_RS10320 PF05670 NFACT protein RNA binding domain DOM78_RS10325 PF13476 AAA domain DOM78_RS10330 PF01513 ATP-NAD kinase DOM78_RS10360 PF00871 Acetokinase family DOM78_RS10365 PF01515 Phosphate acetyl/butaryl transferase DOM78_RS10370 PF12729 Four helix bundle sensory module for signal transduction DOM78_RS10370 PF00672 HAMP domain DOM78_RS10370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM78_RS10375 PF00919 Uncharacterized protein family UPF0004 DOM78_RS10375 PF04055 Radical SAM superfamily DOM78_RS10385 PF00121 Triosephosphate isomerase DOM78_RS10390 PF00248 Aldo/keto reductase family DOM78_RS10395 PF01555 DNA methylase DOM78_RS10400 PF04851 Type III restriction enzyme, res subunit DOM78_RS10585 PF00436 Single-strand binding protein family DOM78_RS10590 PF18644 Phage integrase SAM-like domain DOM78_RS10590 PF00589 Phage integrase family DOM78_RS10620 PF02525 Flavodoxin-like fold DOM78_RS10625 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DOM78_RS10635 PF01312 FlhB HrpN YscU SpaS Family DOM78_RS10640 PF00677 Lumazine binding domain DOM78_RS10645 PF01026 TatD related DNase DOM78_RS10650 PF10145 Phage-related minor tail protein DOM78_RS10650 PF01551 Peptidase family M23 DOM78_RS10650 PF01464 Transglycosylase SLT domain DOM78_RS10655 PF03330 Lytic transglycolase DOM78_RS10655 PF05036 Sporulation related domain DOM78_RS10660 PF00475 Imidazoleglycerol-phosphate dehydratase DOM78_RS10680 PF01926 50S ribosome-binding GTPase DOM78_RS10695 PF00905 Penicillin binding protein transpeptidase domain DOM78_RS10695 PF03717 Penicillin-binding Protein dimerisation domain DOM78_RS10700 PF02719 Polysaccharide biosynthesis protein DOM78_RS10705 PF00210 Ferritin-like domain DOM78_RS10710 PF02441 Flavoprotein DOM78_RS10710 PF04127 DNA / pantothenate metabolism flavoprotein DOM78_RS10725 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DOM78_RS10725 PF00476 DNA polymerase family A DOM78_RS10725 PF01367 5'-3' exonuclease, C-terminal SAM fold DOM78_RS10760 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP DOM78_RS10760 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DOM78_RS10775 PF00115 Cytochrome C and Quinol oxidase polypeptide I DOM78_RS10780 PF01171 PP-loop family DOM78_RS10790 PF03600 Citrate transporter DOM78_RS10795 PF10615 Protein of unknown function (DUF2470) DOM78_RS10795 PF01243 Pyridoxamine 5'-phosphate oxidase DOM78_RS10805 PF00149 Calcineurin-like phosphoesterase DOM78_RS10810 PF02254 TrkA-N domain DOM78_RS10810 PF02080 TrkA-C domain DOM78_RS10810 PF00999 Sodium/hydrogen exchanger family DOM78_RS10815 PF03167 Uracil DNA glycosylase superfamily DOM78_RS10820 PF02686 Glu-tRNAGln amidotransferase C subunit DOM78_RS10825 PF08501 Shikimate dehydrogenase substrate binding domain DOM78_RS10835 PF00586 AIR synthase related protein, N-terminal domain DOM78_RS10835 PF02769 AIR synthase related protein, C-terminal domain DOM78_RS10845 PF07992 Pyridine nucleotide-disulphide oxidoreductase DOM78_RS10850 PF00633 Helix-hairpin-helix motif DOM78_RS10850 PF00730 HhH-GPD superfamily base excision DNA repair protein DOM78_RS10850 PF14815 NUDIX domain DOM78_RS10860 PF00909 Ammonium Transporter Family DOM78_RS10865 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DOM78_RS10865 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DOM78_RS10875 PF00459 Inositol monophosphatase family DOM78_RS10880 PF01039 Carboxyl transferase domain DOM78_RS10880 PF17848 Acetyl-coA carboxylase zinc finger domain DOM78_RS10885 PF02590 Predicted SPOUT methyltransferase DOM78_RS10900 PF00132 Bacterial transferase hexapeptide (six repeats) DOM78_RS10905 PF17810 Arginine decarboxylase helical bundle domain DOM78_RS10905 PF17944 Arginine decarboxylase C-terminal helical extension DOM78_RS10905 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DOM78_RS10910 PF02130 Uncharacterized protein family UPF0054 DOM78_RS10915 PF00440 Bacterial regulatory proteins, tetR family DOM78_RS10920 PF03652 Holliday junction resolvase DOM78_RS10935 PF03776 Septum formation topological specificity factor MinE DOM78_RS10940 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DOM78_RS10955 PF00764 Arginosuccinate synthase DOM78_RS10960 PF00893 Small Multidrug Resistance protein DOM78_RS10965 PF00893 Small Multidrug Resistance protein DOM78_RS10975 PF09397 Ftsk gamma domain DOM78_RS10975 PF17854 FtsK alpha domain DOM78_RS10975 PF01580 FtsK/SpoIIIE family DOM78_RS11000 PF01555 DNA methylase DOM78_RS11035 PF00296 Luciferase-like monooxygenase DOM78_RS11045 PF00296 Luciferase-like monooxygenase DOM78_RS11055 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DOM78_RS11055 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DOM78_RS11060 PF00311 Phosphoenolpyruvate carboxylase DOM78_RS11075 PF00118 TCP-1/cpn60 chaperonin family DOM78_RS11080 PF00166 Chaperonin 10 Kd subunit DOM78_RS11090 PF16730 DnaG-primase C-terminal, helicase-binding domain DOM78_RS11090 PF08275 DNA primase catalytic core, N-terminal domain DOM78_RS11090 PF13662 Toprim domain DOM78_RS11090 PF01807 CHC2 zinc finger DOM78_RS11095 PF03971 Monomeric isocitrate dehydrogenase DOM78_RS11110 PF03831 PhnA domain DOM78_RS11110 PF08274 PhnA Zinc-Ribbon DOM78_RS11120 PF00593 TonB dependent receptor DOM78_RS11120 PF07715 TonB-dependent Receptor Plug Domain DOM78_RS11125 PF08264 Anticodon-binding domain of tRNA DOM78_RS11125 PF00133 tRNA synthetases class I (I, L, M and V) DOM78_RS11130 PF01557 Fumarylacetoacetate (FAA) hydrolase family DOM78_RS11155 PF07724 AAA domain (Cdc48 subfamily) DOM78_RS11155 PF06689 ClpX C4-type zinc finger DOM78_RS11155 PF10431 C-terminal, D2-small domain, of ClpB protein DOM78_RS11160 PF00132 Bacterial transferase hexapeptide (six repeats) DOM78_RS11160 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DOM78_RS11165 PF07977 FabA-like domain DOM78_RS11170 PF02677 Epoxyqueuosine reductase QueH DOM78_RS11175 PF04055 Radical SAM superfamily DOM78_RS11185 PF00977 Histidine biosynthesis protein DOM78_RS11190 PF00398 Ribosomal RNA adenine dimethylase DOM78_RS11195 PF00753 Metallo-beta-lactamase superfamily DOM78_RS11195 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DOM78_RS11195 PF17770 Ribonuclease J C-terminal domain DOM78_RS11200 PF00571 CBS domain DOM78_RS11200 PF01380 SIS domain DOM78_RS11210 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DOM78_RS11235 PF08502 LeuA allosteric (dimerisation) domain DOM78_RS11235 PF00682 HMGL-like DOM78_RS11240 PF02525 Flavodoxin-like fold DOM78_RS11245 PF00330 Aconitase family (aconitate hydratase) DOM78_RS11250 PF00694 Aconitase C-terminal domain DOM78_RS11265 PF00180 Isocitrate/isopropylmalate dehydrogenase DOM78_RS11295 PF01751 Toprim domain DOM78_RS11295 PF00986 DNA gyrase B subunit, carboxyl terminus DOM78_RS11295 PF00204 DNA gyrase B DOM78_RS11295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM78_RS11300 PF00712 DNA polymerase III beta subunit, N-terminal domain DOM78_RS11300 PF02768 DNA polymerase III beta subunit, C-terminal domain DOM78_RS11300 PF02767 DNA polymerase III beta subunit, central domain DOM78_RS11305 PF02405 Permease MlaE DOM78_RS11310 PF00005 ABC transporter DOM78_RS11310 PF09383 NIL domain DOM78_RS11330 PF02511 Thymidylate synthase complementing protein DOM78_RS11340 PF00482 Type II secretion system (T2SS), protein F DOM78_RS11345 PF00437 Type II/IV secretion system protein DOM78_RS11350 PF03958 Bacterial type II/III secretion system short domain DOM78_RS11350 PF00263 Bacterial type II and III secretion system protein DOM78_RS11370 PF02075 Crossover junction endodeoxyribonuclease RuvC