locus-tag class description SE87_RS00005 PF01029 NusB family SE87_RS00010 PF00885 6,7-dimethyl-8-ribityllumazine synthase SE87_RS00015 PF00793 DAHP synthetase I family SE87_RS00020 PF00484 Carbonic anhydrase SE87_RS00025 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SE87_RS00030 PF02569 Pantoate-beta-alanine ligase SE87_RS00070 PF00118 TCP-1/cpn60 chaperonin family SE87_RS00075 PF00166 Chaperonin 10 Kd subunit SE87_RS00080 PF16730 DnaG-primase C-terminal, helicase-binding domain SE87_RS00080 PF13662 Toprim domain SE87_RS00080 PF08275 DNA primase catalytic core, N-terminal domain SE87_RS00080 PF01807 CHC2 zinc finger SE87_RS00115 PF00072 Response regulator receiver domain SE87_RS00115 PF01584 CheW-like domain SE87_RS00120 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SE87_RS00125 PF01569 PAP2 superfamily SE87_RS00130 PF08019 Phosphoethanolamine transferase EptA/EptB SE87_RS00130 PF00884 Sulfatase SE87_RS00150 PF00285 Citrate synthase, C-terminal domain SE87_RS00155 PF00180 Isocitrate/isopropylmalate dehydrogenase SE87_RS00160 PF07509 Protein of unknown function (DUF1523) SE87_RS00175 PF00582 Universal stress protein family SE87_RS00180 PF02617 ATP-dependent Clp protease adaptor protein ClpS SE87_RS00185 PF02861 Clp amino terminal domain, pathogenicity island component SE87_RS00185 PF00004 ATPase family associated with various cellular activities (AAA) SE87_RS00185 PF07724 AAA domain (Cdc48 subfamily) SE87_RS00185 PF17871 AAA lid domain SE87_RS00185 PF10431 C-terminal, D2-small domain, of ClpB protein SE87_RS00190 PF02261 Aspartate decarboxylase SE87_RS00195 PF02575 YbaB/EbfC DNA-binding family SE87_RS00230 PF00483 Nucleotidyl transferase SE87_RS00230 PF01050 Mannose-6-phosphate isomerase SE87_RS00235 PF16363 GDP-mannose 4,6 dehydratase SE87_RS00240 PF01370 NAD dependent epimerase/dehydratase family SE87_RS00250 PF02769 AIR synthase related protein, C-terminal domain SE87_RS00250 PF00586 AIR synthase related protein, N-terminal domain SE87_RS00255 PF07503 HypF finger SE87_RS00255 PF01300 Telomere recombination SE87_RS00255 PF17788 HypF Kae1-like domain SE87_RS00255 PF00708 Acylphosphatase SE87_RS00260 PF04371 Porphyromonas-type peptidyl-arginine deiminase SE87_RS00265 PF01555 DNA methylase SE87_RS00270 PF01381 Helix-turn-helix SE87_RS00270 PF00145 C-5 cytosine-specific DNA methylase SE87_RS00285 PF00145 C-5 cytosine-specific DNA methylase SE87_RS00290 PF00474 Sodium:solute symporter family SE87_RS00295 PF00171 Aldehyde dehydrogenase family SE87_RS00295 PF01619 Proline dehydrogenase SE87_RS00295 PF14850 DNA-binding domain of Proline dehydrogenase SE87_RS00295 PF18327 Proline utilization A proline dehydrogenase N-terminal domain SE87_RS00355 PF01774 UreD urease accessory protein SE87_RS00360 PF02492 CobW/HypB/UreG, nucleotide-binding domain SE87_RS00365 PF01730 UreF SE87_RS00370 PF05194 UreE urease accessory protein, C-terminal domain SE87_RS00370 PF02814 UreE urease accessory protein, N-terminal domain SE87_RS00375 PF02293 AmiS/UreI family transporter SE87_RS00380 PF00449 Urease alpha-subunit, N-terminal domain SE87_RS00380 PF01979 Amidohydrolase family SE87_RS00385 PF00547 Urease, gamma subunit SE87_RS00385 PF00699 Urease beta subunit SE87_RS00395 PF01252 Signal peptidase (SPase) II SE87_RS00400 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SE87_RS00400 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SE87_RS00400 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SE87_RS00400 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SE87_RS00405 PF01649 Ribosomal protein S20 SE87_RS00410 PF03462 PCRF domain SE87_RS00410 PF00472 RF-1 domain SE87_RS00435 PF00672 HAMP domain SE87_RS00435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SE87_RS00435 PF17200 Single Cache domain 2 SE87_RS00440 PF00380 Ribosomal protein S9/S16 SE87_RS00445 PF00572 Ribosomal protein L13 SE87_RS00450 PF17402 Family of unknown function (DUF5408) SE87_RS00455 PF06039 Malate:quinone oxidoreductase (Mqo) SE87_RS00465 PF04539 Sigma-70 region 3 SE87_RS00465 PF04545 Sigma-70, region 4 SE87_RS00465 PF00140 Sigma-70 factor, region 1.2 SE87_RS00465 PF04542 Sigma-70 region 2 SE87_RS00470 PF01048 Phosphorylase superfamily SE87_RS00475 PF00698 Acyl transferase domain SE87_RS00485 PF04556 DpnII restriction endonuclease SE87_RS00490 PF01555 DNA methylase SE87_RS00495 PF01531 Glycosyl transferase family 11 SE87_RS00510 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SE87_RS00510 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SE87_RS00520 PF00291 Pyridoxal-phosphate dependent enzyme SE87_RS00525 PF00672 HAMP domain SE87_RS00525 PF16591 Helical bimodular sensor domain SE87_RS00525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SE87_RS00530 PF02677 Epoxyqueuosine reductase QueH SE87_RS00540 PF00535 Glycosyl transferase family 2 SE87_RS00545 PF17200 Single Cache domain 2 SE87_RS00545 PF00672 HAMP domain SE87_RS00545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SE87_RS00550 PF02872 5'-nucleotidase, C-terminal domain SE87_RS00550 PF00149 Calcineurin-like phosphoesterase SE87_RS00555 PF02664 S-Ribosylhomocysteinase (LuxS) SE87_RS00560 PF01053 Cys/Met metabolism PLP-dependent enzyme SE87_RS00565 PF00291 Pyridoxal-phosphate dependent enzyme SE87_RS00575 PF00012 Hsp70 protein SE87_RS00580 PF01025 GrpE SE87_RS00605 PF00700 Bacterial flagellin C-terminal helical region SE87_RS00605 PF00669 Bacterial flagellin N-terminal helical region SE87_RS00605 PF07196 Flagellin hook IN motif SE87_RS00610 PF01751 Toprim domain SE87_RS00610 PF01131 DNA topoisomerase SE87_RS00610 PF01396 Topoisomerase DNA binding C4 zinc finger SE87_RS00615 PF04055 Radical SAM superfamily SE87_RS00635 PF02896 PEP-utilising enzyme, TIM barrel domain SE87_RS00635 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain SE87_RS00635 PF00391 PEP-utilising enzyme, mobile domain SE87_RS00645 PF03129 Anticodon binding domain SE87_RS00645 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SE87_RS00645 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SE87_RS00650 PF00707 Translation initiation factor IF-3, C-terminal domain SE87_RS00650 PF05198 Translation initiation factor IF-3, N-terminal domain SE87_RS00655 PF01632 Ribosomal protein L35 SE87_RS00660 PF00453 Ribosomal protein L20 SE87_RS00690 PF03313 Serine dehydratase alpha chain SE87_RS00690 PF03315 Serine dehydratase beta chain SE87_RS00695 PF03222 Tryptophan/tyrosine permease family SE87_RS00700 PF01474 Class-II DAHP synthetase family SE87_RS00710 PF00578 AhpC/TSA family SE87_RS00715 PF02589 LUD domain SE87_RS00720 PF11870 Domain of unknown function (DUF3390) SE87_RS00720 PF02589 LUD domain SE87_RS00720 PF13183 4Fe-4S dicluster domain SE87_RS00725 PF02754 Cysteine-rich domain SE87_RS00730 PF02652 L-lactate permease SE87_RS00735 PF02652 L-lactate permease SE87_RS00740 PF14815 NUDIX domain SE87_RS00740 PF00730 HhH-GPD superfamily base excision DNA repair protein SE87_RS00740 PF00633 Helix-hairpin-helix motif SE87_RS00750 PF00115 Cytochrome C and Quinol oxidase polypeptide I SE87_RS00765 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP SE87_RS00765 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SE87_RS00795 PF00154 recA bacterial DNA recombination protein SE87_RS00800 PF03952 Enolase, N-terminal domain SE87_RS00800 PF00113 Enolase, C-terminal TIM barrel domain SE87_RS00815 PF01202 Shikimate kinase SE87_RS00830 PF08238 Sel1 repeat SE87_RS00840 PF01709 Transcriptional regulator SE87_RS00845 PF00490 Delta-aminolevulinic acid dehydratase SE87_RS00855 PF00072 Response regulator receiver domain SE87_RS00855 PF00486 Transcriptional regulatory protein, C terminal SE87_RS00870 PF01136 Peptidase family U32 SE87_RS00880 PF03462 PCRF domain SE87_RS00880 PF00472 RF-1 domain SE87_RS00885 PF03454 MoeA C-terminal region (domain IV) SE87_RS00885 PF03453 MoeA N-terminal region (domain I and II) SE87_RS00885 PF00994 Probable molybdopterin binding domain SE87_RS00905 PF00639 PPIC-type PPIASE domain SE87_RS00910 PF01116 Fructose-bisphosphate aldolase class-II SE87_RS00915 PF08207 Elongation factor P (EF-P) KOW-like domain SE87_RS00915 PF01132 Elongation factor P (EF-P) OB domain SE87_RS00915 PF09285 Elongation factor P, C-terminal SE87_RS00920 PF03102 NeuB family SE87_RS00920 PF08666 SAF domain SE87_RS00925 PF00005 ABC transporter SE87_RS00930 PF00795 Carbon-nitrogen hydrolase SE87_RS00940 PF00152 tRNA synthetases class II (D, K and N) SE87_RS00940 PF01336 OB-fold nucleic acid binding domain SE87_RS00945 PF00464 Serine hydroxymethyltransferase SE87_RS00975 PF03350 Uncharacterized protein family, UPF0114 SE87_RS00980 PF13091 PLD-like domain SE87_RS00985 PF13183 4Fe-4S dicluster domain SE87_RS00985 PF13085 2Fe-2S iron-sulfur cluster binding domain SE87_RS00990 PF02910 Fumarate reductase flavoprotein C-term SE87_RS00990 PF00890 FAD binding domain SE87_RS00995 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SE87_RS01000 PF00121 Triosephosphate isomerase SE87_RS01010 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD SE87_RS01010 PF00132 Bacterial transferase hexapeptide (six repeats) SE87_RS01015 PF02772 S-adenosylmethionine synthetase, central domain SE87_RS01015 PF02773 S-adenosylmethionine synthetase, C-terminal domain SE87_RS01015 PF00438 S-adenosylmethionine synthetase, N-terminal domain SE87_RS01020 PF00334 Nucleoside diphosphate kinase SE87_RS01030 PF01783 Ribosomal L32p protein family SE87_RS01035 PF02504 Fatty acid synthesis protein SE87_RS01040 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SE87_RS01040 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SE87_RS01065 PF01883 Iron-sulfur cluster assembly protein SE87_RS01065 PF10609 NUBPL iron-transfer P-loop NTPase SE87_RS01085 PF00183 Hsp90 protein SE87_RS01090 PF13181 Tetratricopeptide repeat SE87_RS01090 PF08238 Sel1 repeat SE87_RS01095 PF01546 Peptidase family M20/M25/M40 SE87_RS01095 PF07687 Peptidase dimerisation domain SE87_RS01100 PF13932 GidA associated domain SE87_RS01100 PF01134 Glucose inhibited division protein A SE87_RS01105 PF00939 Sodium:sulfate symporter transmembrane region SE87_RS01115 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain SE87_RS01115 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase SE87_RS01115 PF13288 DXP reductoisomerase C-terminal domain SE87_RS01130 PF01161 Phosphatidylethanolamine-binding protein SE87_RS01140 PF00266 Aminotransferase class-V SE87_RS01145 PF01592 NifU-like N terminal domain SE87_RS01145 PF01106 NifU-like domain SE87_RS01145 PF04324 BFD-like [2Fe-2S] binding domain SE87_RS01155 PF18073 Rubredoxin metal binding domain SE87_RS01160 PF01641 SelR domain SE87_RS01160 PF01625 Peptide methionine sulfoxide reductase SE87_RS01165 PF01925 Sulfite exporter TauE/SafE SE87_RS01175 PF01740 STAS domain SE87_RS01175 PF00916 Sulfate permease family SE87_RS01190 PF02348 Cytidylyltransferase SE87_RS01205 PF03738 Glutathionylspermidine synthase preATP-grasp SE87_RS01215 PF13176 Tetratricopeptide repeat SE87_RS01215 PF13181 Tetratricopeptide repeat SE87_RS01215 PF08238 Sel1 repeat SE87_RS01225 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain SE87_RS01225 PF03900 Porphobilinogen deaminase, C-terminal domain SE87_RS01230 PF03129 Anticodon binding domain SE87_RS01230 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SE87_RS01230 PF04073 Aminoacyl-tRNA editing domain SE87_RS01235 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain SE87_RS01235 PF01488 Shikimate / quinate 5-dehydrogenase SE87_RS01235 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain SE87_RS01240 PF00348 Polyprenyl synthetase SE87_RS01255 PF00210 Ferritin-like domain SE87_RS01260 PF00512 His Kinase A (phospho-acceptor) domain SE87_RS01260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SE87_RS01270 PF02119 Flagellar P-ring protein SE87_RS01275 PF00270 DEAD/DEAH box helicase SE87_RS01275 PF00271 Helicase conserved C-terminal domain SE87_RS01290 PF00005 ABC transporter SE87_RS01290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SE87_RS01295 PF00528 Binding-protein-dependent transport system inner membrane component SE87_RS01295 PF12911 N-terminal TM domain of oligopeptide transport permease C SE87_RS01315 PF00709 Adenylosuccinate synthetase SE87_RS01330 PF02163 Peptidase family M50 SE87_RS01335 PF02601 Exonuclease VII, large subunit SE87_RS01335 PF13742 OB-fold nucleic acid binding domain SE87_RS01340 PF18273 Type III R-M EcoP15I C-terminal domain SE87_RS01340 PF01555 DNA methylase SE87_RS01360 PF07724 AAA domain (Cdc48 subfamily) SE87_RS01360 PF02861 Clp amino terminal domain, pathogenicity island component SE87_RS01360 PF10431 C-terminal, D2-small domain, of ClpB protein SE87_RS01360 PF17871 AAA lid domain SE87_RS01360 PF00004 ATPase family associated with various cellular activities (AAA) SE87_RS01365 PF02683 Cytochrome C biogenesis protein transmembrane region SE87_RS01370 PF01979 Amidohydrolase family SE87_RS01375 PF01979 Amidohydrolase family SE87_RS01385 PF04055 Radical SAM superfamily SE87_RS01385 PF00919 Uncharacterized protein family UPF0004 SE87_RS01410 PF03692 Putative zinc- or iron-chelating domain SE87_RS01420 PF00218 Indole-3-glycerol phosphate synthase SE87_RS01430 PF02541 Ppx/GppA phosphatase family SE87_RS01435 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SE87_RS01445 PF01702 Queuine tRNA-ribosyltransferase SE87_RS01455 PF01761 3-dehydroquinate synthase SE87_RS01465 PF00919 Uncharacterized protein family UPF0004 SE87_RS01465 PF04055 Radical SAM superfamily SE87_RS01470 PF17862 AAA+ lid domain SE87_RS01470 PF01434 Peptidase family M41 SE87_RS01470 PF00004 ATPase family associated with various cellular activities (AAA) SE87_RS01490 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SE87_RS01490 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SE87_RS01505 PF04715 Anthranilate synthase component I, N terminal region SE87_RS01505 PF00425 chorismate binding enzyme SE87_RS01510 PF00795 Carbon-nitrogen hydrolase SE87_RS01520 PF00829 Ribosomal prokaryotic L21 protein SE87_RS01525 PF01016 Ribosomal L27 protein SE87_RS01530 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SE87_RS01535 PF00528 Binding-protein-dependent transport system inner membrane component SE87_RS01540 PF00528 Binding-protein-dependent transport system inner membrane component SE87_RS01540 PF12911 N-terminal TM domain of oligopeptide transport permease C SE87_RS01545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SE87_RS01545 PF00005 ABC transporter SE87_RS01550 PF00005 ABC transporter SE87_RS01550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SE87_RS01555 PF01926 50S ribosome-binding GTPase SE87_RS01555 PF01018 GTP1/OBG SE87_RS01570 PF00202 Aminotransferase class-III SE87_RS01585 PF00795 Carbon-nitrogen hydrolase SE87_RS01590 PF01522 Polysaccharide deacetylase SE87_RS01600 PF02492 CobW/HypB/UreG, nucleotide-binding domain SE87_RS01600 PF07683 Cobalamin synthesis protein cobW C-terminal domain SE87_RS01610 PF09827 CRISPR associated protein Cas2 SE87_RS01630 PF01243 Pyridoxamine 5'-phosphate oxidase SE87_RS01630 PF10615 Protein of unknown function (DUF2470) SE87_RS01635 PF05746 DALR anticodon binding domain SE87_RS01635 PF03485 Arginyl tRNA synthetase N terminal domain SE87_RS01635 PF00750 tRNA synthetases class I (R) SE87_RS01640 PF02416 mttA/Hcf106 family SE87_RS01645 PF00625 Guanylate kinase SE87_RS01665 PF02107 Flagellar L-ring protein SE87_RS01670 PF02348 Cytidylyltransferase SE87_RS01675 PF02348 Cytidylyltransferase SE87_RS01685 PF02606 Tetraacyldisaccharide-1-P 4'-kinase SE87_RS01690 PF02540 NAD synthase SE87_RS01700 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SE87_RS01700 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain SE87_RS01705 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SE87_RS01710 PF03776 Septum formation topological specificity factor MinE SE87_RS01715 PF17782 DprA winged helix domain SE87_RS01715 PF02481 DNA recombination-mediator protein A SE87_RS01720 PF03652 Holliday junction resolvase SE87_RS01730 PF08238 Sel1 repeat SE87_RS01785 PF00849 RNA pseudouridylate synthase SE87_RS01790 PF01368 DHH family SE87_RS01790 PF10141 Single-strand DNA-specific exonuclease, C terminal domain SE87_RS01790 PF17768 RecJ OB domain SE87_RS01790 PF02272 DHHA1 domain SE87_RS01795 PF06418 CTP synthase N-terminus SE87_RS01795 PF00117 Glutamine amidotransferase class-I SE87_RS01805 PF01514 Secretory protein of YscJ/FliF family SE87_RS01805 PF08345 Flagellar M-ring protein C-terminal SE87_RS01810 PF01706 FliG C-terminal domain SE87_RS01810 PF14842 FliG N-terminal domain SE87_RS01810 PF14841 FliG middle domain SE87_RS01820 PF02780 Transketolase, C-terminal domain SE87_RS01820 PF02779 Transketolase, pyrimidine binding domain SE87_RS01820 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SE87_RS01825 PF03144 Elongation factor Tu domain 2 SE87_RS01825 PF00009 Elongation factor Tu GTP binding domain SE87_RS01825 PF00679 Elongation factor G C-terminus SE87_RS01825 PF06421 GTP-binding protein LepA C-terminus SE87_RS01835 PF00106 short chain dehydrogenase SE87_RS01855 PF01370 NAD dependent epimerase/dehydratase family SE87_RS01860 PF01416 tRNA pseudouridine synthase SE87_RS01875 PF00268 Ribonucleotide reductase, small chain SE87_RS01885 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SE87_RS01905 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SE87_RS01905 PF00289 Biotin carboxylase, N-terminal domain SE87_RS01905 PF02785 Biotin carboxylase C-terminal domain SE87_RS01910 PF00364 Biotin-requiring enzyme SE87_RS01915 PF00692 dUTPase SE87_RS01925 PF04452 RNA methyltransferase SE87_RS01935 PF00762 Ferrochelatase SE87_RS01945 PF05140 ResB-like family SE87_RS01945 PF01578 Cytochrome C assembly protein SE87_RS01950 PF00852 Glycosyltransferase family 10 (fucosyltransferase) C-term SE87_RS01950 PF18025 Alpha-(1,3)-fucosyltransferase FucT N-terminal domain SE87_RS01955 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SE87_RS01955 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SE87_RS01960 PF17827 PrmC N-terminal domain SE87_RS01960 PF05175 Methyltransferase small domain SE87_RS01965 PF01435 Peptidase family M48 SE87_RS01990 PF00271 Helicase conserved C-terminal domain SE87_RS01990 PF00270 DEAD/DEAH box helicase SE87_RS01990 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SE87_RS01990 PF18074 Primosomal protein N C-terminal domain SE87_RS01990 PF17764 3′ DNA-binding domain (3′BD) SE87_RS01995 PF13649 Methyltransferase domain SE87_RS02000 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SE87_RS02000 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SE87_RS02005 PF08534 Redoxin SE87_RS02010 PF01584 CheW-like domain SE87_RS02015 PF01584 CheW-like domain SE87_RS02015 PF00072 Response regulator receiver domain SE87_RS02015 PF01627 Hpt domain SE87_RS02015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SE87_RS02015 PF02895 Signal transducing histidine kinase, homodimeric domain SE87_RS02020 PF01584 CheW-like domain SE87_RS02020 PF00072 Response regulator receiver domain SE87_RS02030 PF01168 Alanine racemase, N-terminal domain SE87_RS02035 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase SE87_RS02040 PF01842 ACT domain SE87_RS02040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SE87_RS02040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SE87_RS02050 PF00575 S1 RNA binding domain SE87_RS02055 PF02401 LytB protein SE87_RS02060 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SE87_RS02065 PF03147 Ferredoxin-fold anticodon binding domain SE87_RS02065 PF03484 tRNA synthetase B5 domain SE87_RS02065 PF01588 Putative tRNA binding domain SE87_RS02065 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SE87_RS02070 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SE87_RS02070 PF01409 tRNA synthetases class II core domain (F) SE87_RS02075 PF01230 HIT domain SE87_RS02080 PF02347 Glycine cleavage system P-protein SE87_RS02090 PF00384 Molybdopterin oxidoreductase SE87_RS02090 PF18364 Molybdopterin oxidoreductase N-terminal domain SE87_RS02090 PF01568 Molydopterin dinucleotide binding domain SE87_RS02100 PF00117 Glutamine amidotransferase class-I SE87_RS02100 PF00958 GMP synthase C terminal domain SE87_RS02100 PF02540 NAD synthase SE87_RS02145 PF01797 Transposase IS200 like SE87_RS02150 PF00924 Mechanosensitive ion channel SE87_RS02160 PF01588 Putative tRNA binding domain SE87_RS02160 PF00133 tRNA synthetases class I (I, L, M and V) SE87_RS02160 PF09334 tRNA synthetases class I (M) SE87_RS02170 PF08003 Protein of unknown function (DUF1698) SE87_RS02185 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SE87_RS02185 PF17810 Arginine decarboxylase helical bundle domain SE87_RS02185 PF17944 Arginine decarboxylase C-terminal helical extension SE87_RS02260 PF01797 Transposase IS200 like SE87_RS02265 PF01385 Probable transposase SE87_RS02265 PF07282 Putative transposase DNA-binding domain SE87_RS02265 PF12323 Helix-turn-helix domain SE87_RS02275 PF01751 Toprim domain SE87_RS02275 PF01131 DNA topoisomerase SE87_RS02275 PF01396 Topoisomerase DNA binding C4 zinc finger SE87_RS02280 PF03135 CagE, TrbE, VirB family, component of type IV transporter system SE87_RS02380 PF03135 CagE, TrbE, VirB family, component of type IV transporter system SE87_RS02405 PF02384 N-6 DNA Methylase SE87_RS02405 PF12161 HsdM N-terminal domain SE87_RS02410 PF18766 SWI2/SNF2 ATPase SE87_RS02410 PF11867 Domain of unknown function (DUF3387) SE87_RS02410 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SE87_RS02445 PF02254 TrkA-N domain SE87_RS02445 PF00999 Sodium/hydrogen exchanger family SE87_RS02460 PF00528 Binding-protein-dependent transport system inner membrane component SE87_RS02465 PF00005 ABC transporter SE87_RS02465 PF03459 TOBE domain SE87_RS02470 PF00749 tRNA synthetases class I (E and Q), catalytic domain SE87_RS02480 PF02384 N-6 DNA Methylase SE87_RS02490 PF00679 Elongation factor G C-terminus SE87_RS02490 PF03144 Elongation factor Tu domain 2 SE87_RS02490 PF00009 Elongation factor Tu GTP binding domain SE87_RS02550 PF00830 Ribosomal L28 family SE87_RS02560 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SE87_RS02560 PF00953 Glycosyl transferase family 4 SE87_RS02565 PF02875 Mur ligase family, glutamate ligase domain SE87_RS02565 PF08245 Mur ligase middle domain SE87_RS02570 PF04359 Protein of unknown function (DUF493) SE87_RS02575 PF03061 Thioesterase superfamily SE87_RS02580 PF00209 Sodium:neurotransmitter symporter family SE87_RS02585 PF00209 Sodium:neurotransmitter symporter family SE87_RS02590 PF02253 Phospholipase A1 SE87_RS02595 PF00712 DNA polymerase III beta subunit, N-terminal domain SE87_RS02595 PF02767 DNA polymerase III beta subunit, central domain SE87_RS02595 PF02768 DNA polymerase III beta subunit, C-terminal domain SE87_RS02600 PF01751 Toprim domain SE87_RS02600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SE87_RS02600 PF00986 DNA gyrase B subunit, carboxyl terminus SE87_RS02600 PF00204 DNA gyrase B SE87_RS02615 PF01464 Transglycosylase SLT domain SE87_RS02615 PF01551 Peptidase family M23 SE87_RS02615 PF10145 Phage-related minor tail protein SE87_RS02625 PF15437 Plasminogen-binding protein pgbA C-terminal SE87_RS02625 PF15436 Plasminogen-binding protein pgbA N-terminal SE87_RS02630 PF01565 FAD binding domain SE87_RS02630 PF02913 FAD linked oxidases, C-terminal domain SE87_RS02635 PF01113 Dihydrodipicolinate reductase, N-terminus SE87_RS02635 PF05173 Dihydrodipicolinate reductase, C-terminus SE87_RS02645 PF03951 Glutamine synthetase, beta-Grasp domain SE87_RS02645 PF00120 Glutamine synthetase, catalytic domain SE87_RS02655 PF03948 Ribosomal protein L9, C-terminal domain SE87_RS02655 PF01281 Ribosomal protein L9, N-terminal domain SE87_RS02660 PF00227 Proteasome subunit SE87_RS02665 PF10431 C-terminal, D2-small domain, of ClpB protein SE87_RS02665 PF07724 AAA domain (Cdc48 subfamily) SE87_RS02670 PF01926 50S ribosome-binding GTPase SE87_RS02670 PF07650 KH domain SE87_RS02710 PF02534 Type IV secretory system Conjugative DNA transfer SE87_RS02715 PF00437 Type II/IV secretion system protein SE87_RS02725 PF03743 Bacterial conjugation TrbI-like protein SE87_RS02750 PF13117 Cag pathogenicity island protein Cag12 SE87_RS02755 PF16707 Cag pathogenicity island protein S of Helicobacter pylori SE87_RS02815 PF03135 CagE, TrbE, VirB family, component of type IV transporter system SE87_RS02835 PF03507 CagA exotoxin SE87_RS02850 PF01177 Asp/Glu/Hydantoin racemase SE87_RS02855 PF07498 Rho termination factor, N-terminal domain SE87_RS02855 PF07497 Rho termination factor, RNA-binding domain SE87_RS02855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SE87_RS02860 PF01197 Ribosomal protein L31 SE87_RS02865 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SE87_RS02870 PF00588 SpoU rRNA Methylase family SE87_RS02870 PF08032 RNA 2'-O ribose methyltransferase substrate binding SE87_RS02890 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SE87_RS02895 PF00109 Beta-ketoacyl synthase, N-terminal domain SE87_RS02895 PF02801 Beta-ketoacyl synthase, C-terminal domain SE87_RS02900 PF00550 Phosphopantetheine attachment site SE87_RS02910 PF01165 Ribosomal protein S21 SE87_RS02925 PF04224 Protein of unknown function, DUF417 SE87_RS02930 PF01678 Diaminopimelate epimerase SE87_RS02935 PF01594 AI-2E family transporter SE87_RS02945 PF06071 Protein of unknown function (DUF933) SE87_RS02945 PF01926 50S ribosome-binding GTPase SE87_RS02950 PF00883 Cytosol aminopeptidase family, catalytic domain SE87_RS02960 PF00156 Phosphoribosyl transferase domain SE87_RS02970 PF02502 Ribose/Galactose Isomerase SE87_RS02975 PF02163 Peptidase family M50 SE87_RS02980 PF10502 Signal peptidase, peptidase S26 SE87_RS02985 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SE87_RS02985 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SE87_RS03020 PF04509 CheC-like family SE87_RS03020 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SE87_RS03025 PF00730 HhH-GPD superfamily base excision DNA repair protein SE87_RS03025 PF00633 Helix-hairpin-helix motif SE87_RS03030 PF04023 FeoA domain SE87_RS03050 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase SE87_RS03050 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II SE87_RS03050 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg SE87_RS03055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SE87_RS03065 PF04851 Type III restriction enzyme, res subunit SE87_RS03065 PF08774 VRR-NUC domain SE87_RS03070 PF01555 DNA methylase SE87_RS03070 PF18273 Type III R-M EcoP15I C-terminal domain SE87_RS03090 PF00905 Penicillin binding protein transpeptidase domain SE87_RS03090 PF00912 Transglycosylase SE87_RS03095 PF00155 Aminotransferase class I and II SE87_RS03100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SE87_RS03100 PF00672 HAMP domain SE87_RS03100 PF12729 Four helix bundle sensory module for signal transduction SE87_RS03105 PF00005 ABC transporter SE87_RS03110 PF00669 Bacterial flagellin N-terminal helical region SE87_RS03110 PF00700 Bacterial flagellin C-terminal helical region SE87_RS03110 PF07196 Flagellin hook IN motif SE87_RS03125 PF01208 Uroporphyrinogen decarboxylase (URO-D) SE87_RS03140 PF00873 AcrB/AcrD/AcrF family SE87_RS03165 PF00005 ABC transporter SE87_RS03175 PF01653 NAD-dependent DNA ligase adenylation domain SE87_RS03175 PF03120 NAD-dependent DNA ligase OB-fold domain SE87_RS03175 PF00533 BRCA1 C Terminus (BRCT) domain SE87_RS03180 PF00072 Response regulator receiver domain SE87_RS03180 PF01584 CheW-like domain SE87_RS03185 PF01336 OB-fold nucleic acid binding domain SE87_RS03185 PF00152 tRNA synthetases class II (D, K and N) SE87_RS03185 PF02938 GAD domain SE87_RS03205 PF00719 Inorganic pyrophosphatase SE87_RS03210 PF01713 Smr domain SE87_RS03210 PF00488 MutS domain V SE87_RS03220 PF08245 Mur ligase middle domain SE87_RS03220 PF02875 Mur ligase family, glutamate ligase domain SE87_RS03220 PF01225 Mur ligase family, catalytic domain SE87_RS03225 PF00155 Aminotransferase class I and II SE87_RS03230 PF04551 GcpE protein SE87_RS03235 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle SE87_RS03235 PF14602 Hexapeptide repeat of succinyl-transferase SE87_RS03250 PF02525 Flavodoxin-like fold SE87_RS03255 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal SE87_RS03255 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SE87_RS03255 PF10518 TAT (twin-arginine translocation) pathway signal sequence SE87_RS03260 PF00374 Nickel-dependent hydrogenase SE87_RS03265 PF01292 Prokaryotic cytochrome b561 SE87_RS03270 PF01750 Hydrogenase maturation protease SE87_RS03295 PF06508 Queuosine biosynthesis protein QueC SE87_RS03300 PF13735 tRNA nucleotidyltransferase domain 2 putative SE87_RS03300 PF12627 Probable RNA and SrmB- binding site of polymerase A SE87_RS03300 PF01743 Poly A polymerase head domain SE87_RS03310 PF00881 Nitroreductase family SE87_RS03315 PF00749 tRNA synthetases class I (E and Q), catalytic domain SE87_RS03320 PF02325 YGGT family SE87_RS03325 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain SE87_RS03325 PF01464 Transglycosylase SLT domain SE87_RS03330 PF00483 Nucleotidyl transferase SE87_RS03340 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SE87_RS03345 PF10415 Fumarase C C-terminus SE87_RS03345 PF00206 Lyase SE87_RS03355 PF00852 Glycosyltransferase family 10 (fucosyltransferase) C-term SE87_RS03355 PF18025 Alpha-(1,3)-fucosyltransferase FucT N-terminal domain SE87_RS03365 PF00210 Ferritin-like domain SE87_RS03370 PF04055 Radical SAM superfamily SE87_RS03375 PF01103 Surface antigen SE87_RS03375 PF07244 Surface antigen variable number repeat SE87_RS03380 PF04055 Radical SAM superfamily SE87_RS03390 PF02934 GatB/GatE catalytic domain SE87_RS03390 PF02637 GatB domain SE87_RS03405 PF00075 RNase H SE87_RS03410 PF00035 Double-stranded RNA binding motif SE87_RS03410 PF14622 Ribonuclease-III-like SE87_RS03415 PF01264 Chorismate synthase SE87_RS03420 PF10788 Protein of unknown function (DUF2603) SE87_RS03425 PF04055 Radical SAM superfamily SE87_RS03425 PF06969 HemN C-terminal domain SE87_RS03430 PF02754 Cysteine-rich domain SE87_RS03455 PF00155 Aminotransferase class I and II SE87_RS03465 PF18644 Phage integrase SAM-like domain SE87_RS03465 PF00589 Phage integrase family SE87_RS03470 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SE87_RS03470 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SE87_RS03475 PF01925 Sulfite exporter TauE/SafE SE87_RS03480 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SE87_RS03480 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SE87_RS03485 PF02867 Ribonucleotide reductase, barrel domain SE87_RS03485 PF00317 Ribonucleotide reductase, all-alpha domain SE87_RS03485 PF03477 ATP cone domain SE87_RS03500 PF14602 Hexapeptide repeat of succinyl-transferase SE87_RS03500 PF12804 MobA-like NTP transferase domain SE87_RS03505 PF00813 FliP family SE87_RS03510 PF00813 FliP family SE87_RS03520 PF07664 Ferrous iron transport protein B C terminus SE87_RS03520 PF07670 Nucleoside recognition SE87_RS03520 PF02421 Ferrous iron transport protein B SE87_RS03530 PF00108 Thiolase, N-terminal domain SE87_RS03530 PF02803 Thiolase, C-terminal domain SE87_RS03535 PF01144 Coenzyme A transferase SE87_RS03540 PF01144 Coenzyme A transferase SE87_RS03545 PF02667 Short chain fatty acid transporter SE87_RS03555 PF01968 Hydantoinase/oxoprolinase SE87_RS03555 PF05378 Hydantoinase/oxoprolinase N-terminal region SE87_RS03565 PF08882 Acetone carboxylase gamma subunit SE87_RS03580 PF01219 Prokaryotic diacylglycerol kinase SE87_RS03585 PF03989 DNA gyrase C-terminal domain, beta-propeller SE87_RS03585 PF00521 DNA gyrase/topoisomerase IV, subunit A SE87_RS03595 PF00158 Sigma-54 interaction domain SE87_RS03595 PF00072 Response regulator receiver domain SE87_RS03600 PF00005 ABC transporter SE87_RS03600 PF17760 UvrA interaction domain SE87_RS03600 PF17755 UvrA DNA-binding domain SE87_RS03610 PF01795 MraW methylase family SE87_RS03620 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase SE87_RS03640 PF02661 Fic/DOC family SE87_RS03640 PF12728 Helix-turn-helix domain SE87_RS03645 PF00309 Sigma-54 factor, Activator interacting domain (AID) SE87_RS03645 PF04963 Sigma-54 factor, core binding domain SE87_RS03645 PF04552 Sigma-54, DNA binding domain SE87_RS03650 PF12399 Branched-chain amino acid ATP-binding cassette transporter SE87_RS03650 PF00005 ABC transporter SE87_RS03660 PF12169 DNA polymerase III subunits gamma and tau domain III SE87_RS03660 PF12170 DNA polymerase III tau subunit V interacting with alpha SE87_RS03665 PF01810 LysE type translocator SE87_RS03685 PF00710 Asparaginase, N-terminal SE87_RS03685 PF17763 Glutaminase/Asparaginase C-terminal domain SE87_RS03690 PF03605 Anaerobic c4-dicarboxylate membrane transporter SE87_RS03705 PF01207 Dihydrouridine synthase (Dus) SE87_RS03710 PF01171 PP-loop family SE87_RS03735 PF00919 Uncharacterized protein family UPF0004 SE87_RS03735 PF04055 Radical SAM superfamily SE87_RS03740 PF00156 Phosphoribosyl transferase domain SE87_RS03745 PF00266 Aminotransferase class-V SE87_RS03750 PF04608 Phosphatidylglycerophosphatase A SE87_RS03755 PF01820 D-ala D-ala ligase N-terminus SE87_RS03755 PF07478 D-ala D-ala ligase C-terminus SE87_RS03765 PF08245 Mur ligase middle domain SE87_RS03765 PF02875 Mur ligase family, glutamate ligase domain SE87_RS03765 PF01225 Mur ligase family, catalytic domain SE87_RS03770 PF01230 HIT domain SE87_RS03775 PF14572 Phosphoribosyl synthetase-associated domain SE87_RS03775 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SE87_RS03790 PF01926 50S ribosome-binding GTPase SE87_RS03795 PF00849 RNA pseudouridylate synthase SE87_RS03795 PF01479 S4 domain SE87_RS03805 PF02390 Putative methyltransferase SE87_RS03810 PF00005 ABC transporter SE87_RS03830 PF07195 Flagellar hook-associated protein 2 C-terminus SE87_RS03830 PF02465 Flagellar hook-associated protein 2 N-terminus SE87_RS03835 PF02561 Flagellar protein FliS SE87_RS03845 PF00899 ThiF family SE87_RS03845 PF00581 Rhodanese-like domain SE87_RS03855 PF00795 Carbon-nitrogen hydrolase SE87_RS03860 PF03553 Na+/H+ antiporter family SE87_RS03860 PF13726 Na+-H+ antiporter family SE87_RS03865 PF01554 MatE SE87_RS03870 PF12072 Domain of unknown function (DUF3552) SE87_RS03870 PF01966 HD domain SE87_RS03870 PF00013 KH domain SE87_RS03885 PF00448 SRP54-type protein, GTPase domain SE87_RS03915 PF04055 Radical SAM superfamily SE87_RS03915 PF06463 Molybdenum Cofactor Synthesis C SE87_RS03920 PF12804 MobA-like NTP transferase domain SE87_RS03925 PF01312 FlhB HrpN YscU SpaS Family SE87_RS03935 PF01520 N-acetylmuramoyl-L-alanine amidase SE87_RS03945 PF00579 tRNA synthetases class I (W and Y) SE87_RS03945 PF01479 S4 domain SE87_RS03950 PF02824 TGS domain SE87_RS03950 PF04607 Region found in RelA / SpoT proteins SE87_RS03950 PF13291 ACT domain SE87_RS03955 PF01192 RNA polymerase Rpb6 SE87_RS03960 PF00696 Amino acid kinase family SE87_RS03970 PF11791 Aconitate B N-terminal domain SE87_RS03970 PF06434 Aconitate hydratase 2 N-terminus SE87_RS03970 PF00330 Aconitase family (aconitate hydratase) SE87_RS04000 PF03548 Outer membrane lipoprotein carrier protein LolA SE87_RS04005 PF07517 SecA DEAD-like domain SE87_RS04005 PF01043 SecA preprotein cross-linking domain SE87_RS04005 PF07516 SecA Wing and Scaffold domain SE87_RS04005 PF02810 SEC-C motif SE87_RS04025 PF01420 Type I restriction modification DNA specificity domain SE87_RS04030 PF00403 Heavy-metal-associated domain SE87_RS04035 PF01078 Magnesium chelatase, subunit ChlI SE87_RS04035 PF13335 Magnesium chelatase, subunit ChlI C-terminal SE87_RS04040 PF01327 Polypeptide deformylase SE87_RS04045 PF00574 Clp protease SE87_RS04050 PF05698 Bacterial trigger factor protein (TF) C-terminus SE87_RS04050 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SE87_RS04050 PF05697 Bacterial trigger factor protein (TF) SE87_RS04060 PF05211 Neuraminyllactose-binding hemagglutinin precursor (NLBH) SE87_RS04065 PF01967 MoaC family SE87_RS04070 PF00994 Probable molybdopterin binding domain SE87_RS04075 PF02391 MoaE protein SE87_RS04085 PF00925 GTP cyclohydrolase II SE87_RS04095 PF00925 GTP cyclohydrolase II SE87_RS04095 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase SE87_RS04115 PF01648 4'-phosphopantetheinyl transferase superfamily SE87_RS04120 PF03748 Flagellar basal body-associated protein FliL SE87_RS04140 PF00753 Metallo-beta-lactamase superfamily SE87_RS04145 PF00899 ThiF family SE87_RS04150 PF01618 MotA/TolQ/ExbB proton channel family SE87_RS04155 PF13677 Membrane MotB of proton-channel complex MotA/MotB SE87_RS04155 PF00691 OmpA family SE87_RS04165 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SE87_RS04170 PF00005 ABC transporter SE87_RS04170 PF00571 CBS domain SE87_RS04185 PF02151 UvrB/uvrC motif SE87_RS04185 PF08459 UvrC Helix-hairpin-helix N-terminal SE87_RS04185 PF01541 GIY-YIG catalytic domain SE87_RS04190 PF01842 ACT domain SE87_RS04190 PF00742 Homoserine dehydrogenase SE87_RS04190 PF03447 Homoserine dehydrogenase, NAD binding domain SE87_RS04195 PF02021 Uncharacterised protein family UPF0102 SE87_RS04200 PF00085 Thioredoxin SE87_RS04205 PF07992 Pyridine nucleotide-disulphide oxidoreductase SE87_RS04215 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) SE87_RS04220 PF00119 ATP synthase A chain SE87_RS04225 PF00478 IMP dehydrogenase / GMP reductase domain SE87_RS04225 PF00571 CBS domain SE87_RS04230 PF01425 Amidase SE87_RS04235 PF01121 Dephospho-CoA kinase SE87_RS04240 PF17284 Spermidine synthase tetramerisation domain SE87_RS04250 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SE87_RS04250 PF01926 50S ribosome-binding GTPase SE87_RS04255 PF00216 Bacterial DNA-binding protein SE87_RS04280 PF02719 Polysaccharide biosynthesis protein SE87_RS04285 PF02441 Flavoprotein SE87_RS04285 PF04127 DNA / pantothenate metabolism flavoprotein SE87_RS04295 PF02581 Thiamine monophosphate synthase SE87_RS04300 PF08543 Phosphomethylpyrimidine kinase SE87_RS04305 PF02110 Hydroxyethylthiazole kinase family SE87_RS04310 PF18766 SWI2/SNF2 ATPase SE87_RS04310 PF12008 Type I restriction and modification enzyme - subunit R C terminal SE87_RS04310 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SE87_RS04320 PF01420 Type I restriction modification DNA specificity domain SE87_RS04330 PF12161 HsdM N-terminal domain SE87_RS04330 PF02384 N-6 DNA Methylase SE87_RS04335 PF01569 PAP2 superfamily SE87_RS04345 PF12848 ABC transporter SE87_RS04345 PF00005 ABC transporter SE87_RS04350 PF00478 IMP dehydrogenase / GMP reductase domain SE87_RS04355 PF03062 MBOAT, membrane-bound O-acyltransferase family SE87_RS04365 PF13580 SIS domain SE87_RS04370 PF01467 Cytidylyltransferase-like SE87_RS04370 PF00294 pfkB family carbohydrate kinase SE87_RS04375 PF01370 NAD dependent epimerase/dehydratase family SE87_RS04390 PF03309 Type III pantothenate kinase SE87_RS04395 PF15437 Plasminogen-binding protein pgbA C-terminal SE87_RS04405 PF00692 dUTPase SE87_RS04410 PF03449 Transcription elongation factor, N-terminal SE87_RS04410 PF01272 Transcription elongation factor, GreA/GreB, C-term SE87_RS04415 PF02684 Lipid-A-disaccharide synthetase SE87_RS04425 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA SE87_RS04430 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SE87_RS04430 PF00460 Flagella basal body rod protein SE87_RS04430 PF07196 Flagellin hook IN motif SE87_RS04430 PF07559 Flagellar basal body protein FlaE SE87_RS04435 PF02611 CDP-diacylglycerol pyrophosphatase SE87_RS04440 PF03831 PhnA domain SE87_RS04440 PF08274 PhnA Zinc-Ribbon SE87_RS04455 PF00199 Catalase SE87_RS04455 PF06628 Catalase-related immune-responsive SE87_RS04460 PF00593 TonB dependent receptor SE87_RS04460 PF07715 TonB-dependent Receptor Plug Domain SE87_RS04465 PF02075 Crossover junction endodeoxyribonuclease RuvC SE87_RS04490 PF07499 RuvA, C-terminal domain SE87_RS04490 PF01330 RuvA N terminal domain SE87_RS04500 PF03023 Lipid II flippase MurJ SE87_RS04505 PF01406 tRNA synthetases class I (C) catalytic domain SE87_RS04505 PF09190 DALR domain SE87_RS04510 PF02691 Vacuolating cyotoxin SE87_RS04510 PF03797 Autotransporter beta-domain SE87_RS04515 PF00005 ABC transporter SE87_RS04520 PF01032 FecCD transport family SE87_RS04525 PF00106 short chain dehydrogenase SE87_RS04530 PF03061 Thioesterase superfamily SE87_RS04535 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ SE87_RS04545 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ SE87_RS04580 PF01924 Hydrogenase formation hypA family SE87_RS04585 PF01455 HupF/HypC family SE87_RS04590 PF02492 CobW/HypB/UreG, nucleotide-binding domain SE87_RS04610 PF01515 Phosphate acetyl/butaryl transferase SE87_RS04615 PF01515 Phosphate acetyl/butaryl transferase SE87_RS04620 PF01515 Phosphate acetyl/butaryl transferase SE87_RS04625 PF01515 Phosphate acetyl/butaryl transferase SE87_RS04635 PF13860 FlgD Ig-like domain SE87_RS04635 PF03963 Flagellar hook capping protein - N-terminal region SE87_RS04635 PF13861 FlgD Tudor-like domain SE87_RS04640 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SE87_RS04640 PF00460 Flagella basal body rod protein SE87_RS04640 PF07559 Flagellar basal body protein FlaE SE87_RS04640 PF00460 Flagella basal body rod protein SE87_RS04640 PF07559 Flagellar basal body protein FlaE SE87_RS04640 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SE87_RS04650 PF02384 N-6 DNA Methylase SE87_RS04650 PF07669 Eco57I restriction-modification methylase SE87_RS04655 PF13361 UvrD-like helicase C-terminal domain SE87_RS04655 PF00580 UvrD/REP helicase N-terminal domain SE87_RS04695 PF02142 MGS-like domain SE87_RS04695 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SE87_RS04695 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SE87_RS04700 PF01027 Inhibitor of apoptosis-promoting Bax1 SE87_RS04705 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SE87_RS04705 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SE87_RS04710 PF02691 Vacuolating cyotoxin SE87_RS04710 PF03797 Autotransporter beta-domain SE87_RS04720 PF01361 Tautomerase enzyme SE87_RS04725 PF02132 RecR protein SE87_RS04730 PF01142 tRNA pseudouridine synthase D (TruD) SE87_RS04735 PF01435 Peptidase family M48 SE87_RS04740 PF01227 GTP cyclohydrolase I SE87_RS04745 PF00348 Polyprenyl synthetase SE87_RS04750 PF01975 Survival protein SurE SE87_RS04760 PF01242 6-pyruvoyl tetrahydropterin synthase SE87_RS04780 PF07690 Major Facilitator Superfamily SE87_RS04795 PF00528 Binding-protein-dependent transport system inner membrane component SE87_RS04800 PF00497 Bacterial extracellular solute-binding proteins, family 3 SE87_RS04805 PF01168 Alanine racemase, N-terminal domain SE87_RS04805 PF00842 Alanine racemase, C-terminal domain SE87_RS04810 PF01235 Sodium:alanine symporter family SE87_RS04815 PF01266 FAD dependent oxidoreductase SE87_RS04820 PF01042 Endoribonuclease L-PSP SE87_RS04830 PF13146 TRL-like protein family SE87_RS04850 PF03553 Na+/H+ antiporter family SE87_RS04865 PF02590 Predicted SPOUT methyltransferase SE87_RS04870 PF17848 Acetyl-coA carboxylase zinc finger domain SE87_RS04870 PF01039 Carboxyl transferase domain SE87_RS04880 PF18146 Damage-inducible protein CinA KH domain SE87_RS04880 PF00994 Probable molybdopterin binding domain SE87_RS04880 PF02464 Competence-damaged protein SE87_RS04890 PF00881 Nitroreductase family SE87_RS04895 PF01790 Prolipoprotein diacylglyceryl transferase SE87_RS04900 PF00849 RNA pseudouridylate synthase SE87_RS04905 PF02390 Putative methyltransferase SE87_RS04905 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) SE87_RS04915 PF01784 NIF3 (NGG1p interacting factor 3) SE87_RS04920 PF02091 Glycyl-tRNA synthetase alpha subunit SE87_RS04925 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SE87_RS04925 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SE87_RS04930 PF00550 Phosphopantetheine attachment site SE87_RS04945 PF00350 Dynamin family SE87_RS04955 PF09827 CRISPR associated protein Cas2 SE87_RS04965 PF00873 AcrB/AcrD/AcrF family SE87_RS04980 PF02092 Glycyl-tRNA synthetase beta subunit SE87_RS04990 PF06415 BPG-independent PGAM N-terminus (iPGM_N) SE87_RS04990 PF01676 Metalloenzyme superfamily SE87_RS04995 PF02686 Glu-tRNAGln amidotransferase C subunit SE87_RS05010 PF02491 SHS2 domain inserted in FTSA SE87_RS05015 PF00091 Tubulin/FtsZ family, GTPase domain SE87_RS05015 PF12327 FtsZ family, C-terminal domain SE87_RS05025 PF02163 Peptidase family M50 SE87_RS05055 PF00924 Mechanosensitive ion channel SE87_RS05090 PF01797 Transposase IS200 like SE87_RS05095 PF01385 Probable transposase SE87_RS05095 PF12323 Helix-turn-helix domain SE87_RS05095 PF07282 Putative transposase DNA-binding domain SE87_RS05120 PF07804 HipA-like C-terminal domain SE87_RS05125 PF00589 Phage integrase family SE87_RS05125 PF02899 Phage integrase, N-terminal SAM-like domain SE87_RS05135 PF07282 Putative transposase DNA-binding domain SE87_RS05135 PF01385 Probable transposase SE87_RS05135 PF12323 Helix-turn-helix domain SE87_RS05140 PF01797 Transposase IS200 like SE87_RS05150 PF13614 AAA domain SE87_RS05190 PF01797 Transposase IS200 like SE87_RS05205 PF02503 Polyphosphate kinase middle domain SE87_RS05205 PF13090 Polyphosphate kinase C-terminal domain 2 SE87_RS05205 PF17941 Polyphosphate kinase C-terminal domain 1 SE87_RS05205 PF13089 Polyphosphate kinase N-terminal domain SE87_RS05210 PF01180 Dihydroorotate dehydrogenase SE87_RS05220 PF00701 Dihydrodipicolinate synthetase family SE87_RS05235 PF01066 CDP-alcohol phosphatidyltransferase SE87_RS05240 PF00324 Amino acid permease SE87_RS05245 PF17820 PDZ domain SE87_RS05245 PF13180 PDZ domain SE87_RS05250 PF02542 YgbB family SE87_RS05250 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SE87_RS05255 PF00486 Transcriptional regulatory protein, C terminal SE87_RS05255 PF00072 Response regulator receiver domain SE87_RS05260 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SE87_RS05260 PF00476 DNA polymerase family A SE87_RS05260 PF01612 3'-5' exonuclease SE87_RS05260 PF01367 5'-3' exonuclease, C-terminal SAM fold SE87_RS05270 PF01556 DnaJ C terminal domain SE87_RS05270 PF00226 DnaJ domain SE87_RS05275 PF13411 MerR HTH family regulatory protein SE87_RS05280 PF01661 Macro domain SE87_RS05280 PF16193 AAA C-terminal domain SE87_RS05280 PF05496 Holliday junction DNA helicase RuvB P-loop domain SE87_RS05280 PF12002 MgsA AAA+ ATPase C terminal SE87_RS05285 PF01475 Ferric uptake regulator family SE87_RS05300 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SE87_RS05300 PF04509 CheC-like family SE87_RS05305 PF02154 Flagellar motor switch protein FliM SE87_RS05305 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SE87_RS05310 PF04545 Sigma-70, region 4 SE87_RS05310 PF04539 Sigma-70 region 3 SE87_RS05310 PF04542 Sigma-70 region 2 SE87_RS05320 PF10609 NUBPL iron-transfer P-loop NTPase SE87_RS05325 PF00448 SRP54-type protein, GTPase domain SE87_RS05330 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SE87_RS05335 PF01321 Creatinase/Prolidase N-terminal domain SE87_RS05335 PF00557 Metallopeptidase family M24 SE87_RS05340 PF01220 Dehydroquinase class II SE87_RS05350 PF00312 Ribosomal protein S15 SE87_RS05355 PF00771 FHIPEP family SE87_RS05365 PF00072 Response regulator receiver domain SE87_RS05365 PF00486 Transcriptional regulatory protein, C terminal SE87_RS05370 PF00149 Calcineurin-like phosphoesterase SE87_RS05375 PF13193 AMP-binding enzyme C-terminal domain SE87_RS05375 PF00501 AMP-binding enzyme SE87_RS05375 PF16177 Acetyl-coenzyme A synthetase N-terminus SE87_RS05380 PF02576 RimP N-terminal domain SE87_RS05380 PF17384 RimP C-terminal SH3 domain SE87_RS05385 PF02033 Ribosome-binding factor A SE87_RS05390 PF04760 Translation initiation factor IF-2, N-terminal region SE87_RS05390 PF00009 Elongation factor Tu GTP binding domain SE87_RS05390 PF11987 Translation-initiation factor 2 SE87_RS05400 PF00288 GHMP kinases N terminal domain SE87_RS05410 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase SE87_RS05415 PF03775 Septum formation inhibitor MinC, C-terminal domain SE87_RS05440 PF02548 Ketopantoate hydroxymethyltransferase SE87_RS05445 PF05496 Holliday junction DNA helicase RuvB P-loop domain SE87_RS05445 PF17864 RuvB AAA lid domain SE87_RS05445 PF05491 RuvB C-terminal winged helix domain SE87_RS05455 PF00902 Sec-independent protein translocase protein (TatC) SE87_RS05460 PF02547 Queuosine biosynthesis protein SE87_RS05465 PF02527 rRNA small subunit methyltransferase G SE87_RS05490 PF00072 Response regulator receiver domain SE87_RS05500 PF00004 ATPase family associated with various cellular activities (AAA) SE87_RS05500 PF01434 Peptidase family M41 SE87_RS05500 PF17862 AAA+ lid domain SE87_RS05510 PF01066 CDP-alcohol phosphatidyltransferase SE87_RS05515 PF00403 Heavy-metal-associated domain SE87_RS05520 PF00403 Heavy-metal-associated domain SE87_RS05540 PF03824 High-affinity nickel-transport protein SE87_RS05550 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system SE87_RS05565 PF00005 ABC transporter SE87_RS05565 PF00664 ABC transporter transmembrane region SE87_RS05575 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SE87_RS05575 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SE87_RS05585 PF01728 FtsJ-like methyltransferase SE87_RS05590 PF01687 Riboflavin kinase SE87_RS05590 PF06574 FAD synthetase SE87_RS05595 PF02780 Transketolase, C-terminal domain SE87_RS05595 PF00456 Transketolase, thiamine diphosphate binding domain SE87_RS05595 PF02779 Transketolase, pyrimidine binding domain SE87_RS05605 PF17854 FtsK alpha domain SE87_RS05605 PF09397 Ftsk gamma domain SE87_RS05605 PF01580 FtsK/SpoIIIE family SE87_RS05610 PF00083 Sugar (and other) transporter SE87_RS05615 PF00460 Flagella basal body rod protein SE87_RS05615 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SE87_RS05630 PF12323 Helix-turn-helix domain SE87_RS05630 PF07282 Putative transposase DNA-binding domain SE87_RS05630 PF01385 Probable transposase SE87_RS05635 PF01797 Transposase IS200 like SE87_RS05645 PF08238 Sel1 repeat SE87_RS05650 PF01081 KDPG and KHG aldolase SE87_RS05655 PF00920 Dehydratase family SE87_RS05660 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain SE87_RS05660 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain SE87_RS05665 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SE87_RS05670 PF02685 Glucokinase SE87_RS05675 PF00107 Zinc-binding dehydrogenase SE87_RS05675 PF08240 Alcohol dehydrogenase GroES-like domain SE87_RS05695 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase SE87_RS05705 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II SE87_RS05705 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg SE87_RS05710 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SE87_RS05715 PF00206 Lyase SE87_RS05715 PF10397 Adenylosuccinate lyase C-terminus SE87_RS05725 PF04851 Type III restriction enzyme, res subunit SE87_RS05725 PF02151 UvrB/uvrC motif SE87_RS05725 PF12344 Ultra-violet resistance protein B SE87_RS05725 PF00271 Helicase conserved C-terminal domain SE87_RS05725 PF17757 UvrB interaction domain SE87_RS05750 PF07559 Flagellar basal body protein FlaE SE87_RS05750 PF00460 Flagella basal body rod protein SE87_RS05750 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SE87_RS05760 PF00145 C-5 cytosine-specific DNA methylase SE87_RS05775 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SE87_RS05785 PF00691 OmpA family SE87_RS05790 PF07676 WD40-like Beta Propeller Repeat SE87_RS05800 PF02472 Biopolymer transport protein ExbD/TolR SE87_RS05805 PF01618 MotA/TolQ/ExbB proton channel family SE87_RS05810 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SE87_RS05815 PF02874 ATP synthase alpha/beta family, beta-barrel domain SE87_RS05815 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SE87_RS05820 PF00231 ATP synthase SE87_RS05825 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SE87_RS05825 PF02874 ATP synthase alpha/beta family, beta-barrel domain SE87_RS05825 PF00306 ATP synthase alpha/beta chain, C terminal domain SE87_RS05835 PF00430 ATP synthase B/B' CF(0) SE87_RS05845 PF17762 HTH domain found in ParB protein SE87_RS05845 PF02195 ParB-like nuclease domain SE87_RS05850 PF13614 AAA domain SE87_RS05855 PF03099 Biotin/lipoate A/B protein ligase family SE87_RS05855 PF08279 HTH domain SE87_RS05855 PF02237 Biotin protein ligase C terminal domain SE87_RS05860 PF00551 Formyl transferase SE87_RS05860 PF02911 Formyl transferase, C-terminal domain SE87_RS05905 PF01245 Ribosomal protein L19 SE87_RS05910 PF01746 tRNA (Guanine-1)-methyltransferase SE87_RS05915 PF01782 RimM N-terminal domain SE87_RS05915 PF05239 PRC-barrel domain SE87_RS05925 PF00886 Ribosomal protein S16 SE87_RS05930 PF02978 Signal peptide binding domain SE87_RS05930 PF02881 SRP54-type protein, helical bundle domain SE87_RS05930 PF00448 SRP54-type protein, GTPase domain SE87_RS05935 PF10458 Valyl tRNA synthetase tRNA binding arm SE87_RS05935 PF08264 Anticodon-binding domain of tRNA SE87_RS05935 PF00133 tRNA synthetases class I (I, L, M and V) SE87_RS05940 PF02623 FliW protein SE87_RS05945 PF03033 Glycosyltransferase family 28 N-terminal domain SE87_RS05945 PF04101 Glycosyltransferase family 28 C-terminal domain SE87_RS05960 PF14748 Pyrroline-5-carboxylate reductase dimerisation SE87_RS05960 PF03807 NADP oxidoreductase coenzyme F420-dependent SE87_RS05965 PF02661 Fic/DOC family SE87_RS05970 PF02130 Uncharacterized protein family UPF0054 SE87_RS05975 PF00258 Flavodoxin SE87_RS05990 PF07992 Pyridine nucleotide-disulphide oxidoreductase SE87_RS06000 PF00342 Phosphoglucose isomerase SE87_RS06010 PF02554 Carbon starvation protein CstA SE87_RS06010 PF13722 5TM C-terminal transporter carbon starvation CstA SE87_RS06015 PF00528 Binding-protein-dependent transport system inner membrane component SE87_RS06020 PF00528 Binding-protein-dependent transport system inner membrane component SE87_RS06025 PF00005 ABC transporter SE87_RS06040 PF07690 Major Facilitator Superfamily SE87_RS06045 PF00860 Permease family SE87_RS06055 PF01048 Phosphorylase superfamily SE87_RS06060 PF01676 Metalloenzyme superfamily SE87_RS06065 PF07662 Na+ dependent nucleoside transporter C-terminus SE87_RS06065 PF01773 Na+ dependent nucleoside transporter N-terminus SE87_RS06075 PF07690 Major Facilitator Superfamily SE87_RS06080 PF01171 PP-loop family SE87_RS06085 PF00999 Sodium/hydrogen exchanger family SE87_RS06085 PF02254 TrkA-N domain SE87_RS06085 PF02080 TrkA-C domain SE87_RS06090 PF01554 MatE SE87_RS06095 PF07690 Major Facilitator Superfamily SE87_RS06100 PF00194 Eukaryotic-type carbonic anhydrase SE87_RS06115 PF02774 Semialdehyde dehydrogenase, dimerisation domain SE87_RS06115 PF01118 Semialdehyde dehydrogenase, NAD binding domain SE87_RS06120 PF13393 Histidyl-tRNA synthetase SE87_RS06120 PF03129 Anticodon binding domain SE87_RS06125 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SE87_RS06135 PF00248 Aldo/keto reductase family SE87_RS06140 PF03144 Elongation factor Tu domain 2 SE87_RS06140 PF00679 Elongation factor G C-terminus SE87_RS06140 PF00009 Elongation factor Tu GTP binding domain SE87_RS06140 PF14492 Elongation Factor G, domain II SE87_RS06140 PF03764 Elongation factor G, domain IV SE87_RS06145 PF00177 Ribosomal protein S7p/S5e SE87_RS06150 PF00164 Ribosomal protein S12/S23 SE87_RS06155 PF00562 RNA polymerase Rpb2, domain 6 SE87_RS06155 PF00623 RNA polymerase Rpb1, domain 2 SE87_RS06155 PF04565 RNA polymerase Rpb2, domain 3 SE87_RS06155 PF04561 RNA polymerase Rpb2, domain 2 SE87_RS06155 PF04560 RNA polymerase Rpb2, domain 7 SE87_RS06155 PF04563 RNA polymerase beta subunit SE87_RS06155 PF05000 RNA polymerase Rpb1, domain 4 SE87_RS06155 PF04983 RNA polymerase Rpb1, domain 3 SE87_RS06155 PF04997 RNA polymerase Rpb1, domain 1 SE87_RS06155 PF10385 RNA polymerase beta subunit external 1 domain SE87_RS06155 PF04998 RNA polymerase Rpb1, domain 5 SE87_RS06165 PF16320 Ribosomal protein L7/L12 dimerisation domain SE87_RS06165 PF00542 Ribosomal protein L7/L12 C-terminal domain SE87_RS06170 PF00466 Ribosomal protein L10 SE87_RS06175 PF00687 Ribosomal protein L1p/L10e family SE87_RS06180 PF00298 Ribosomal protein L11, RNA binding domain SE87_RS06180 PF03946 Ribosomal protein L11, N-terminal domain SE87_RS06185 PF02357 Transcription termination factor nusG SE87_RS06200 PF00471 Ribosomal protein L33 SE87_RS06205 PF00009 Elongation factor Tu GTP binding domain SE87_RS06205 PF03143 Elongation factor Tu C-terminal domain SE87_RS06205 PF03144 Elongation factor Tu domain 2 SE87_RS06230 PF00664 ABC transporter transmembrane region SE87_RS06230 PF00005 ABC transporter SE87_RS06240 PF02086 D12 class N6 adenine-specific DNA methyltransferase SE87_RS06245 PF05315 ICEA Protein SE87_RS06250 PF00132 Bacterial transferase hexapeptide (six repeats) SE87_RS06265 PF00137 ATP synthase subunit C SE87_RS06270 PF00575 S1 RNA binding domain SE87_RS06270 PF03725 3' exoribonuclease family, domain 2 SE87_RS06270 PF01138 3' exoribonuclease family, domain 1 SE87_RS06270 PF00013 KH domain SE87_RS06280 PF03968 OstA-like protein SE87_RS06280 PF04453 LPS transport system D SE87_RS06290 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SE87_RS06290 PF02844 Phosphoribosylglycinamide synthetase, N domain SE87_RS06290 PF02843 Phosphoribosylglycinamide synthetase, C domain SE87_RS06300 PF00005 ABC transporter SE87_RS06305 PF01255 Putative undecaprenyl diphosphate synthase SE87_RS06325 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SE87_RS06330 PF04055 Radical SAM superfamily SE87_RS06335 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SE87_RS06340 PF00293 NUDIX domain SE87_RS06345 PF00696 Amino acid kinase family SE87_RS06345 PF01842 ACT domain SE87_RS06345 PF13840 ACT domain SE87_RS06360 PF00809 Pterin binding enzyme SE87_RS06370 PF00892 EamA-like transporter family SE87_RS06385 PF00117 Glutamine amidotransferase class-I SE87_RS06385 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SE87_RS06390 PF00795 Carbon-nitrogen hydrolase SE87_RS06400 PF02545 Maf-like protein SE87_RS06405 PF02272 DHHA1 domain SE87_RS06405 PF01411 tRNA synthetases class II (A) SE87_RS06405 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SE87_RS06425 PF01084 Ribosomal protein S18 SE87_RS06430 PF00436 Single-strand binding protein family SE87_RS06435 PF01250 Ribosomal protein S6 SE87_RS06440 PF06144 DNA polymerase III, delta subunit SE87_RS06445 PF00773 RNB domain SE87_RS06450 PF08501 Shikimate dehydrogenase substrate binding domain SE87_RS06460 PF00528 Binding-protein-dependent transport system inner membrane component SE87_RS06465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SE87_RS06470 PF00579 tRNA synthetases class I (W and Y) SE87_RS06480 PF03840 Preprotein translocase SecG subunit SE87_RS06485 PF01765 Ribosome recycling factor SE87_RS06490 PF00156 Phosphoribosyl transferase domain SE87_RS06505 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 SE87_RS06510 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SE87_RS06515 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit SE87_RS06520 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit SE87_RS06535 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SE87_RS06535 PF01568 Molydopterin dinucleotide binding domain SE87_RS06535 PF12838 4Fe-4S dicluster domain SE87_RS06535 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SE87_RS06535 PF00384 Molybdopterin oxidoreductase SE87_RS06540 PF00146 NADH dehydrogenase SE87_RS06545 PF12838 4Fe-4S dicluster domain SE87_RS06550 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 SE87_RS06555 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SE87_RS06560 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SE87_RS06560 PF00361 Proton-conducting membrane transporter SE87_RS06565 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus SE87_RS06565 PF00361 Proton-conducting membrane transporter SE87_RS06570 PF00361 Proton-conducting membrane transporter SE87_RS06580 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SE87_RS06580 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SE87_RS06580 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SE87_RS06580 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SE87_RS06590 PF00290 Tryptophan synthase alpha chain SE87_RS06595 PF00291 Pyridoxal-phosphate dependent enzyme SE87_RS06600 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase SE87_RS06600 PF00218 Indole-3-glycerol phosphate synthase SE87_RS06605 PF02885 Glycosyl transferase family, helical bundle domain SE87_RS06605 PF00591 Glycosyl transferase family, a/b domain SE87_RS06610 PF00117 Glutamine amidotransferase class-I SE87_RS06615 PF00425 chorismate binding enzyme SE87_RS06615 PF04715 Anthranilate synthase component I, N terminal region SE87_RS06625 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SE87_RS06635 PF04264 YceI-like domain SE87_RS06640 PF03070 TENA/THI-4/PQQC family SE87_RS06655 PF04973 Nicotinamide mononucleotide transporter SE87_RS06665 PF01196 Ribosomal protein L17 SE87_RS06670 PF01000 RNA polymerase Rpb3/RpoA insert domain SE87_RS06670 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SE87_RS06670 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SE87_RS06675 PF01479 S4 domain SE87_RS06675 PF00163 Ribosomal protein S4/S9 N-terminal domain SE87_RS06680 PF00411 Ribosomal protein S11 SE87_RS06685 PF00416 Ribosomal protein S13/S18 SE87_RS06690 PF00444 Ribosomal protein L36 SE87_RS06695 PF01176 Translation initiation factor 1A / IF-1 SE87_RS06700 PF00557 Metallopeptidase family M24 SE87_RS06705 PF00344 SecY translocase SE87_RS06710 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SE87_RS06715 PF03719 Ribosomal protein S5, C-terminal domain SE87_RS06715 PF00333 Ribosomal protein S5, N-terminal domain SE87_RS06720 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SE87_RS06725 PF00347 Ribosomal protein L6 SE87_RS06730 PF00410 Ribosomal protein S8 SE87_RS06735 PF00253 Ribosomal protein S14p/S29e SE87_RS06740 PF00281 Ribosomal protein L5 SE87_RS06740 PF00673 ribosomal L5P family C-terminus SE87_RS06745 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SE87_RS06745 PF00467 KOW motif SE87_RS06750 PF00238 Ribosomal protein L14p/L23e SE87_RS06755 PF00366 Ribosomal protein S17 SE87_RS06760 PF00831 Ribosomal L29 protein SE87_RS06765 PF00252 Ribosomal protein L16p/L10e SE87_RS06770 PF07650 KH domain SE87_RS06770 PF00189 Ribosomal protein S3, C-terminal domain SE87_RS06775 PF00237 Ribosomal protein L22p/L17e SE87_RS06780 PF00203 Ribosomal protein S19 SE87_RS06785 PF03947 Ribosomal Proteins L2, C-terminal domain SE87_RS06785 PF00181 Ribosomal Proteins L2, RNA binding domain SE87_RS06790 PF00276 Ribosomal protein L23 SE87_RS06795 PF00573 Ribosomal protein L4/L1 family SE87_RS06800 PF00297 Ribosomal protein L3 SE87_RS06805 PF00338 Ribosomal protein S10p/S20e SE87_RS06820 PF01351 Ribonuclease HII SE87_RS06830 PF00206 Lyase SE87_RS06830 PF10415 Fumarase C C-terminus SE87_RS06845 PF00529 HlyD membrane-fusion protein of T1SS SE87_RS06845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SE87_RS06850 PF00873 AcrB/AcrD/AcrF family SE87_RS06855 PF05437 Branched-chain amino acid transport protein (AzlD) SE87_RS06860 PF03591 AzlC protein SE87_RS06865 PF00226 DnaJ domain SE87_RS06865 PF01556 DnaJ C terminal domain SE87_RS06865 PF00684 DnaJ central domain SE87_RS06890 PF01467 Cytidylyltransferase-like SE87_RS06895 PF01402 Ribbon-helix-helix protein, copG family SE87_RS06895 PF08753 NikR C terminal nickel binding domain SE87_RS06900 PF01618 MotA/TolQ/ExbB proton channel family SE87_RS06905 PF02472 Biopolymer transport protein ExbD/TolR SE87_RS06910 PF03544 Gram-negative bacterial TonB protein C-terminal SE87_RS06920 PF03741 Integral membrane protein TerC family SE87_RS06925 PF01544 CorA-like Mg2+ transporter protein SE87_RS06930 PF00162 Phosphoglycerate kinase SE87_RS06935 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SE87_RS06935 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SE87_RS06940 PF03167 Uracil DNA glycosylase superfamily SE87_RS06945 PF01553 Acyltransferase SE87_RS06955 PF13180 PDZ domain SE87_RS06955 PF03572 Peptidase family S41 SE87_RS06965 PF01555 DNA methylase SE87_RS06965 PF18755 Restriction Enzyme Adenine Methylase Associated SE87_RS06985 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain SE87_RS06985 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain SE87_RS06990 PF02445 Quinolinate synthetase A protein SE87_RS06995 PF02666 Phosphatidylserine decarboxylase SE87_RS07010 PF01040 UbiA prenyltransferase family SE87_RS07020 PF03796 DnaB-like helicase C terminal domain SE87_RS07020 PF00772 DnaB-like helicase N terminal domain SE87_RS07025 PF01256 Carbohydrate kinase SE87_RS07025 PF03853 YjeF-related protein N-terminus SE87_RS07030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SE87_RS07035 PF00072 Response regulator receiver domain SE87_RS07035 PF00486 Transcriptional regulatory protein, C terminal SE87_RS07045 PF01555 DNA methylase SE87_RS07050 PF18755 Restriction Enzyme Adenine Methylase Associated SE87_RS07050 PF01555 DNA methylase SE87_RS07065 PF04085 rod shape-determining protein MreC SE87_RS07075 PF10431 C-terminal, D2-small domain, of ClpB protein SE87_RS07075 PF07724 AAA domain (Cdc48 subfamily) SE87_RS07080 PF00132 Bacterial transferase hexapeptide (six repeats) SE87_RS07080 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 SE87_RS07085 PF07977 FabA-like domain SE87_RS07090 PF02623 FliW protein SE87_RS07095 PF13525 Outer membrane lipoprotein SE87_RS07100 PF05362 Lon protease (S16) C-terminal proteolytic domain SE87_RS07100 PF00004 ATPase family associated with various cellular activities (AAA) SE87_RS07100 PF02190 ATP-dependent protease La (LON) substrate-binding domain SE87_RS07105 PF01842 ACT domain SE87_RS07105 PF02153 Prephenate dehydrogenase SE87_RS07130 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain SE87_RS07135 PF00834 Ribulose-phosphate 3 epimerase family SE87_RS07140 PF11490 DNA polymerase III polC-type N-terminus II SE87_RS07140 PF07733 Bacterial DNA polymerase III alpha NTPase domain SE87_RS07140 PF14480 DNA polymerase III polC-type N-terminus I SE87_RS07140 PF00929 Exonuclease SE87_RS07140 PF02811 PHP domain SE87_RS07140 PF14579 Helix-hairpin-helix motif SE87_RS07140 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SE87_RS07175 PF02463 RecF/RecN/SMC N terminal domain SE87_RS07180 PF01513 ATP-NAD kinase SE87_RS07195 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SE87_RS07195 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SE87_RS07200 PF00491 Arginase family SE87_RS07205 PF07715 TonB-dependent Receptor Plug Domain SE87_RS07205 PF00593 TonB dependent receptor SE87_RS07205 PF07660 Secretin and TonB N terminus short domain SE87_RS07215 PF18766 SWI2/SNF2 ATPase SE87_RS07215 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SE87_RS07215 PF11867 Domain of unknown function (DUF3387) SE87_RS07220 PF02384 N-6 DNA Methylase SE87_RS07220 PF12161 HsdM N-terminal domain SE87_RS07235 PF06968 Biotin and Thiamin Synthesis associated domain SE87_RS07235 PF04055 Radical SAM superfamily SE87_RS07240 PF03631 Virulence factor BrkB SE87_RS07285 PF14489 QueF-like protein SE87_RS07310 PF00884 Sulfatase SE87_RS07310 PF08019 Phosphoethanolamine transferase EptA/EptB SE87_RS07315 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SE87_RS07320 PF01313 Bacterial export proteins, family 3 SE87_RS07325 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SE87_RS07325 PF18269 T3SS EscN ATPase C-terminal domain SE87_RS07330 PF00437 Type II/IV secretion system protein SE87_RS07335 PF08264 Anticodon-binding domain of tRNA SE87_RS07335 PF00133 tRNA synthetases class I (I, L, M and V) SE87_RS07340 PF01479 S4 domain SE87_RS07360 PF04055 Radical SAM superfamily SE87_RS07365 PF01380 SIS domain SE87_RS07365 PF00571 CBS domain SE87_RS07370 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SE87_RS07370 PF00753 Metallo-beta-lactamase superfamily SE87_RS07370 PF17770 Ribonuclease J C-terminal domain SE87_RS07375 PF00398 Ribosomal RNA adenine dimethylase SE87_RS07390 PF00551 Formyl transferase SE87_RS07390 PF01842 ACT domain SE87_RS07430 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SE87_RS07435 PF02599 Global regulator protein family SE87_RS07440 PF00288 GHMP kinases N terminal domain SE87_RS07445 PF01668 SmpB protein SE87_RS07450 PF01618 MotA/TolQ/ExbB proton channel family SE87_RS07455 PF02472 Biopolymer transport protein ExbD/TolR SE87_RS07460 PF00468 Ribosomal protein L34 SE87_RS07465 PF00825 Ribonuclease P SE87_RS07470 PF01809 Putative membrane protein insertion efficiency factor SE87_RS07475 PF14849 YidC periplasmic domain SE87_RS07475 PF02096 60Kd inner membrane protein SE87_RS07485 PF10396 GTP-binding protein TrmE N-terminus SE87_RS07485 PF12631 MnmE helical domain SE87_RS07485 PF01926 50S ribosome-binding GTPase SE87_RS07510 PF02169 LPP20 lipoprotein SE87_RS07520 PF00085 Thioredoxin SE87_RS07525 PF00849 RNA pseudouridylate synthase SE87_RS07525 PF01479 S4 domain SE87_RS07530 PF07733 Bacterial DNA polymerase III alpha NTPase domain SE87_RS07530 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SE87_RS07530 PF14579 Helix-hairpin-helix motif SE87_RS07530 PF02811 PHP domain SE87_RS07535 PF03150 Di-haem cytochrome c peroxidase SE87_RS07535 PF00034 Cytochrome c SE87_RS07555 PF00005 ABC transporter SE87_RS07555 PF09383 NIL domain SE87_RS07560 PF02405 Permease MlaE SE87_RS07570 PF01063 Amino-transferase class IV SE87_RS07580 PF01367 5'-3' exonuclease, C-terminal SAM fold SE87_RS07580 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SE87_RS07580 PF00476 DNA polymerase family A SE87_RS07590 PF02384 N-6 DNA Methylase SE87_RS07600 PF02223 Thymidylate kinase SE87_RS07605 PF01467 Cytidylyltransferase-like SE87_RS07610 PF02441 Flavoprotein SE87_RS07620 PF00580 UvrD/REP helicase N-terminal domain SE87_RS07620 PF13361 UvrD-like helicase C-terminal domain SE87_RS07630 PF02403 Seryl-tRNA synthetase N-terminal domain SE87_RS07630 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SE87_RS07640 PF02609 Exonuclease VII small subunit SE87_RS07645 PF01209 ubiE/COQ5 methyltransferase family SE87_RS07650 PF03653 Uncharacterised protein family (UPF0093) SE87_RS07655 PF09186 Domain of unknown function (DUF1949) SE87_RS07655 PF01205 Uncharacterized protein family UPF0029 SE87_RS07670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SE87_RS07680 PF00571 CBS domain SE87_RS07680 PF03471 Transporter associated domain SE87_RS07680 PF01595 Cyclin M transmembrane N-terminal domain SE87_RS07685 PF01384 Phosphate transporter family SE87_RS07690 PF01106 NifU-like domain SE87_RS07700 PF02875 Mur ligase family, glutamate ligase domain SE87_RS07700 PF08245 Mur ligase middle domain SE87_RS07705 PF00923 Transaldolase/Fructose-6-phosphate aldolase SE87_RS07710 PF14693 Ribosomal protein TL5, C-terminal domain SE87_RS07710 PF01386 Ribosomal L25p family SE87_RS07715 PF01195 Peptidyl-tRNA hydrolase SE87_RS07750 PF05175 Methyltransferase small domain SE87_RS07755 PF01872 RibD C-terminal domain SE87_RS07755 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SE87_RS07760 PF03616 Sodium/glutamate symporter SE87_RS07765 PF16653 Saccharopine dehydrogenase C-terminal domain SE87_RS07765 PF03435 Saccharopine dehydrogenase NADP binding domain SE87_RS07770 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase SE87_RS07770 PF13746 4Fe-4S dicluster domain SE87_RS07770 PF12801 4Fe-4S binding domain SE87_RS07775 PF02660 Glycerol-3-phosphate acyltransferase SE87_RS07795 PF03841 L-seryl-tRNA selenium transferase SE87_RS07800 PF13184 NusA-like KH domain SE87_RS07800 PF08529 NusA N-terminal domain SE87_RS07810 PF12950 TaqI-like C-terminal specificity domain SE87_RS07810 PF07669 Eco57I restriction-modification methylase SE87_RS07825 PF04851 Type III restriction enzyme, res subunit SE87_RS07825 PF08774 VRR-NUC domain SE87_RS07835 PF01555 DNA methylase SE87_RS07835 PF18273 Type III R-M EcoP15I C-terminal domain SE87_RS07840 PF04851 Type III restriction enzyme, res subunit SE87_RS07840 PF00271 Helicase conserved C-terminal domain SE87_RS07855 PF03372 Endonuclease/Exonuclease/phosphatase family SE87_RS07875 PF08299 Bacterial dnaA protein helix-turn-helix SE87_RS07875 PF00308 Bacterial dnaA protein SE87_RS07885 PF10398 Protein of unknown function (DUF2443) SE87_RS07890 PF01380 SIS domain SE87_RS07895 PF02511 Thymidylate synthase complementing protein SE87_RS07900 PF07282 Putative transposase DNA-binding domain SE87_RS07900 PF12323 Helix-turn-helix domain SE87_RS07900 PF01385 Probable transposase SE87_RS07905 PF01797 Transposase IS200 like SE87_RS07925 PF00033 Cytochrome b/b6/petB SE87_RS07925 PF00032 Cytochrome b(C-terminal)/b6/petD SE87_RS07930 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal SE87_RS07930 PF00355 Rieske [2Fe-2S] domain SE87_RS07935 PF02559 CarD-like/TRCF domain SE87_RS07935 PF00270 DEAD/DEAH box helicase SE87_RS07935 PF17757 UvrB interaction domain SE87_RS07935 PF03461 TRCF domain SE87_RS07935 PF00271 Helicase conserved C-terminal domain SE87_RS07945 PF01551 Peptidase family M23 SE87_RS07945 PF04225 Opacity-associated protein A LysM-like domain SE87_RS07955 PF08245 Mur ligase middle domain SE87_RS07955 PF02875 Mur ligase family, glutamate ligase domain SE87_RS07965 PF09334 tRNA synthetases class I (M) SE87_RS07965 PF13603 Leucyl-tRNA synthetase, Domain 2 SE87_RS07965 PF00133 tRNA synthetases class I (I, L, M and V) SE87_RS07975 PF02355 Protein export membrane protein SE87_RS07975 PF07549 SecD/SecF GG Motif SE87_RS07980 PF02355 Protein export membrane protein SE87_RS07985 PF02699 Preprotein translocase subunit SE87_RS07990 PF06965 Na+/H+ antiporter 1 SE87_RS07995 PF13361 UvrD-like helicase C-terminal domain SE87_RS07995 PF12705 PD-(D/E)XK nuclease superfamily SE87_RS07995 PF00580 UvrD/REP helicase N-terminal domain SE87_RS08000 PF00318 Ribosomal protein S2 SE87_RS08005 PF00889 Elongation factor TS SE87_RS08010 PF03717 Penicillin-binding Protein dimerisation domain SE87_RS08010 PF00905 Penicillin binding protein transpeptidase domain SE87_RS08015 PF02049 Flagellar hook-basal body complex protein FliE SE87_RS08020 PF00460 Flagella basal body rod protein SE87_RS08020 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SE87_RS08025 PF00460 Flagella basal body rod protein SE87_RS08030 PF01098 Cell cycle protein SE87_RS08045 PF10417 C-terminal domain of 1-Cys peroxiredoxin SE87_RS08045 PF00578 AhpC/TSA family SE87_RS08050 PF03180 NLPA lipoprotein SE87_RS08055 PF03717 Penicillin-binding Protein dimerisation domain SE87_RS08055 PF00905 Penicillin binding protein transpeptidase domain SE87_RS08065 PF01926 50S ribosome-binding GTPase SE87_RS08085 PF03330 Lytic transglycolase SE87_RS08085 PF05036 Sporulation related domain SE87_RS08090 PF01464 Transglycosylase SLT domain SE87_RS08090 PF01476 LysM domain SE87_RS08095 PF01026 TatD related DNase SE87_RS08100 PF00677 Lumazine binding domain SE87_RS08110 PF00005 ABC transporter SE87_RS08110 PF09383 NIL domain SE87_RS08115 PF00528 Binding-protein-dependent transport system inner membrane component SE87_RS08130 PF01569 PAP2 superfamily SE87_RS08135 PF00953 Glycosyl transferase family 4 SE87_RS08140 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ SE87_RS08145 PF04166 Pyridoxal phosphate biosynthetic protein PdxA SE87_RS08150 PF00814 Glycoprotease family SE87_RS08155 PF00460 Flagella basal body rod protein SE87_RS08155 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SE87_RS08170 PF13099 Domain of unknown function (DUF3944) SE87_RS08170 PF03981 Ubiquinol-cytochrome C chaperone SE87_RS08175 PF03981 Ubiquinol-cytochrome C chaperone SE87_RS08175 PF13099 Domain of unknown function (DUF3944) SE87_RS08195 PF02601 Exonuclease VII, large subunit SE87_RS08195 PF13742 OB-fold nucleic acid binding domain