SE87_RS00005 IPR006027 NusB/RsmB/TIM44 SE87_RS00005 IPR011605 NusB antitermination factor SE87_RS00010 IPR002180 6,7-dimethyl-8-ribityllumazine synthase SE87_RS00015 IPR006218 DAHP synthetase I/KDSA SE87_RS00015 IPR006269 3-deoxy-8-phosphooctulonate synthase SE87_RS00015 IPR013785 Aldolase-type TIM barrel SE87_RS00020 IPR001765 Carbonic anhydrase SE87_RS00020 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site SE87_RS00025 IPR001754 Orotidine 5'-phosphate decarboxylase domain SE87_RS00025 IPR011060 Ribulose-phosphate binding barrel SE87_RS00025 IPR013785 Aldolase-type TIM barrel SE87_RS00025 IPR014732 Orotidine 5'-phosphate decarboxylase SE87_RS00025 IPR018089 Orotidine 5'-phosphate decarboxylase, active site SE87_RS00030 IPR003721 Pantoate-beta-alanine ligase SE87_RS00030 IPR004821 Cytidyltransferase-like domain SE87_RS00030 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SE87_RS00065 IPR002718 Outer membrane protein, Helicobacter SE87_RS00070 IPR001844 Chaperonin Cpn60 SE87_RS00070 IPR002423 Chaperonin Cpn60/TCP-1 SE87_RS00070 IPR018370 Chaperonin Cpn60, conserved site SE87_RS00070 IPR027409 GroEL-like apical domain SE87_RS00070 IPR027413 GroEL-like equatorial domain SE87_RS00075 IPR011032 GroES (chaperonin 10)-like SE87_RS00075 IPR018369 Chaperonin Cpn10, conserved site SE87_RS00075 IPR020818 Chaperonin Cpn10 SE87_RS00080 IPR002694 Zinc finger, CHC2-type SE87_RS00080 IPR006171 Toprim domain SE87_RS00080 IPR006295 DNA primase, DnaG SE87_RS00080 IPR013264 DNA primase, catalytic core, N-terminal SE87_RS00080 IPR030846 SE87_RS00080 SE87_RS00080 IPR031988 SE87_RS00080 SE87_RS00085 IPR004506 tRNA-specific 2-thiouridylase SE87_RS00085 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SE87_RS00095 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 SE87_RS00105 IPR002543 FtsK domain SE87_RS00105 IPR004346 CagE, TrbE, VirB component of type IV transporter system SE87_RS00105 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain SE87_RS00105 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS00115 IPR001789 Signal transduction response regulator, receiver domain SE87_RS00115 IPR002545 CheW-like protein SE87_RS00115 IPR011006 CheY-like superfamily SE87_RS00115 IPR024181 Chemotaxis response regulator CheV SE87_RS00120 IPR005730 Carboxynorspermidine decarboxylase SE87_RS00120 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal SE87_RS00120 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal SE87_RS00120 IPR029066 PLP-binding barrel SE87_RS00125 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SE87_RS00130 IPR000917 Sulfatase SE87_RS00130 IPR012549 Domain of unknown function DUF1705 SE87_RS00130 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha SE87_RS00130 IPR017850 Alkaline-phosphatase-like, core domain SE87_RS00145 IPR002718 Outer membrane protein, Helicobacter SE87_RS00150 IPR002020 Citrate synthase-like SE87_RS00150 IPR016142 Citrate synthase-like, large alpha subdomain SE87_RS00150 IPR016143 Citrate synthase-like, small alpha subdomain SE87_RS00150 IPR019810 Citrate synthase active site SE87_RS00150 IPR024176 Citrate synthase, bacterial-type SE87_RS00155 IPR001804 Isocitrate and isopropylmalate dehydrogenases family SE87_RS00155 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic SE87_RS00155 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site SE87_RS00155 IPR024084 Isopropylmalate dehydrogenase-like domain SE87_RS00160 IPR011088 Bacteriophage phiNM3, A0EWY4 SE87_RS00165 IPR004472 Dethiobiotin synthase BioD SE87_RS00165 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS00175 IPR006016 UspA SE87_RS00175 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SE87_RS00180 IPR003769 Adaptor protein ClpS, core SE87_RS00180 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SE87_RS00180 IPR022935 ATP-dependent Clp protease adaptor protein ClpS SE87_RS00185 IPR001270 ClpA/B family SE87_RS00185 IPR003593 AAA+ ATPase domain SE87_RS00185 IPR003959 ATPase, AAA-type, core SE87_RS00185 IPR004176 Clp, N-terminal SE87_RS00185 IPR018368 ClpA/B, conserved site 1 SE87_RS00185 IPR019489 Clp ATPase, C-terminal SE87_RS00185 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS00185 IPR028299 ClpA/B, conserved site 2 SE87_RS00190 IPR003190 Aspartate decarboxylase SE87_RS00190 IPR009010 Aspartate decarboxylase-like domain SE87_RS00195 IPR004401 Nucleoid-associated protein YbaB SE87_RS00200 IPR001478 PDZ domain SE87_RS00205 IPR007688 Conjugal transfer, TrbL/VirB6 SE87_RS00215 IPR007430 Bacterial virulence protein VirB8 SE87_RS00215 IPR032710 SE87_RS00215 SE87_RS00220 IPR010258 Conjugal transfer, TrbG/VirB9/CagX SE87_RS00225 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI SE87_RS00230 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal SE87_RS00230 IPR005835 Nucleotidyl transferase SE87_RS00230 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase SE87_RS00230 IPR011051 RmlC-like cupin domain SE87_RS00230 IPR014710 RmlC-like jelly roll fold SE87_RS00230 IPR029044 Nucleotide-diphospho-sugar transferases SE87_RS00235 IPR006368 GDP-mannose 4,6-dehydratase SE87_RS00235 IPR016040 NAD(P)-binding domain SE87_RS00240 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain SE87_RS00240 IPR016040 NAD(P)-binding domain SE87_RS00240 IPR028614 GDP-L-fucose synthase SE87_RS00250 IPR010918 AIR synthase-related protein, C-terminal domain SE87_RS00250 IPR011854 Hydrogenase expression/formation protein HypE SE87_RS00250 IPR016188 PurM, N-terminal-like SE87_RS00255 IPR001792 Acylphosphatase-like domain SE87_RS00255 IPR004421 Carbamoyltransferase, HypF-type SE87_RS00255 IPR006070 YrdC-like domain SE87_RS00255 IPR011125 Zinc finger, HypF-type SE87_RS00255 IPR017945 DHBP synthase RibB-like alpha/beta domain SE87_RS00255 IPR017968 Acylphosphatase, conserved site SE87_RS00260 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type SE87_RS00265 IPR001091 Restriction/modification DNA-methylase SE87_RS00265 IPR002052 DNA methylase, N-6 adenine-specific, conserved site SE87_RS00265 IPR002941 DNA methylase N-4/N-6 SE87_RS00265 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS00270 IPR001525 C-5 cytosine methyltransferase SE87_RS00270 IPR018117 DNA methylase, C-5 cytosine-specific, active site SE87_RS00270 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS00270 IPR031303 SE87_RS00270 SE87_RS00285 IPR002052 DNA methylase, N-6 adenine-specific, conserved site SE87_RS00285 IPR007848 Methyltransferase small domain SE87_RS00285 IPR018117 DNA methylase, C-5 cytosine-specific, active site SE87_RS00285 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS00290 IPR001734 Sodium/solute symporter SE87_RS00290 IPR011851 Sodium/proline symporter SE87_RS00295 IPR002872 Proline dehydrogenase domain SE87_RS00295 IPR015590 Aldehyde dehydrogenase domain SE87_RS00295 IPR016160 Aldehyde dehydrogenase, cysteine active site SE87_RS00295 IPR016161 Aldehyde/histidinol dehydrogenase SE87_RS00295 IPR016162 Aldehyde dehydrogenase, N-terminal SE87_RS00295 IPR016163 Aldehyde dehydrogenase, C-terminal SE87_RS00295 IPR025703 Bifunctional protein PutA SE87_RS00295 IPR029041 FAD-linked oxidoreductase-like SE87_RS00295 IPR029510 Aldehyde dehydrogenase, glutamic acid active site SE87_RS00330 IPR029013 HP0062-like domain SE87_RS00335 IPR032869 SE87_RS00335 SE87_RS00340 IPR018958 SMI1/KNR4 like domain SE87_RS00350 IPR002543 FtsK domain SE87_RS00350 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS00355 IPR002669 Urease accessory protein UreD SE87_RS00360 IPR003495 CobW/HypB/UreG domain SE87_RS00360 IPR004400 Urease accessory protein UreG SE87_RS00360 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS00365 IPR002639 Urease accessory protein UreF SE87_RS00370 IPR004029 UreE urease accessory, N-terminal SE87_RS00370 IPR007864 Urease accessory protein UreE, C-terminal domain SE87_RS00370 IPR012406 Urease accessory protein UreE SE87_RS00375 IPR003211 AmiS/UreI transporter SE87_RS00380 IPR005848 Urease, alpha subunit SE87_RS00380 IPR006680 Amidohydrolase 1 SE87_RS00380 IPR011059 Metal-dependent hydrolase, composite domain SE87_RS00380 IPR011612 Urease alpha-subunit, N-terminal domain SE87_RS00380 IPR017950 Urease active site SE87_RS00380 IPR029754 Urease nickel binding site SE87_RS00380 IPR032466 SE87_RS00380 SE87_RS00385 IPR002019 Urease, beta subunit SE87_RS00385 IPR002026 Urease, gamma/gamma-beta subunit SE87_RS00385 IPR008223 Urease, gamma-beta subunit SE87_RS00395 IPR001872 Peptidase A8, signal peptidase II SE87_RS00400 IPR005841 Alpha-D-phosphohexomutase superfamily SE87_RS00400 IPR005843 Alpha-D-phosphohexomutase, C-terminal SE87_RS00400 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I SE87_RS00400 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II SE87_RS00400 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III SE87_RS00400 IPR006352 Phosphoglucosamine mutase SE87_RS00400 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III SE87_RS00400 IPR016066 Alpha-D-phosphohexomutase, conserved site SE87_RS00405 IPR002583 Ribosomal protein S20 SE87_RS00410 IPR000352 Peptide chain release factor class I/class II SE87_RS00410 IPR004373 Peptide chain release factor 1 SE87_RS00410 IPR005139 Peptide chain release factor SE87_RS00410 IPR014720 Double-stranded RNA-binding domain SE87_RS00420 IPR002718 Outer membrane protein, Helicobacter SE87_RS00435 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain SE87_RS00440 IPR000754 Ribosomal protein S9 SE87_RS00440 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SE87_RS00440 IPR020568 Ribosomal protein S5 domain 2-type fold SE87_RS00440 IPR020574 Ribosomal protein S9, conserved site SE87_RS00440 IPR023035 Ribosomal protein S9, bacterial/plastid SE87_RS00445 IPR005822 Ribosomal protein L13 SE87_RS00445 IPR005823 Ribosomal protein L13, bacterial-type SE87_RS00445 IPR023563 Ribosomal protein L13, conserved site SE87_RS00445 IPR023564 Ribosomal protein L13 domain SE87_RS00455 IPR006231 Malate:quinone-oxidoreductase SE87_RS00455 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain SE87_RS00460 IPR000064 Endopeptidase, NLPC/P60 domain SE87_RS00460 IPR025606 NLPC/P60, N-terminal domain SE87_RS00460 IPR026864 SH3b2-type SH3 domain SE87_RS00460 IPR027017 Uncharacterised peptidase with NlpC/P60 domain, YkfC type SE87_RS00465 IPR000943 RNA polymerase sigma-70 SE87_RS00465 IPR007624 RNA polymerase sigma-70 region 3 SE87_RS00465 IPR007627 RNA polymerase sigma-70 region 2 SE87_RS00465 IPR007630 RNA polymerase sigma-70 region 4 SE87_RS00465 IPR009042 RNA polymerase sigma-70 region 1.2 SE87_RS00465 IPR011991 Winged helix-turn-helix DNA-binding domain SE87_RS00465 IPR012760 RNA polymerase sigma factor RpoD, C-terminal SE87_RS00465 IPR013324 RNA polymerase sigma factor, region 3/4 SE87_RS00465 IPR013325 RNA polymerase sigma factor, region 2 SE87_RS00465 IPR014284 RNA polymerase sigma-70 like domain SE87_RS00465 IPR028630 RNA polymerase sigma factor RpoD SE87_RS00470 IPR000845 Nucleoside phosphorylase domain SE87_RS00470 IPR010049 MTA/SAH nucleosidase SE87_RS00470 IPR018017 Nucleoside phosphorylase SE87_RS00475 IPR001227 Acyl transferase domain SE87_RS00475 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type SE87_RS00475 IPR014043 Acyl transferase SE87_RS00475 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase SE87_RS00475 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding SE87_RS00475 IPR020801 Polyketide synthase, acyl transferase domain SE87_RS00475 IPR024925 Malonyl CoA-acyl carrier protein transacylase SE87_RS00485 IPR007637 Restriction endonuclease, type II, DpmII-like SE87_RS00485 IPR011335 Restriction endonuclease type II-like SE87_RS00485 IPR021191 Restriction endonuclease, type II, DpmII SE87_RS00490 IPR001091 Restriction/modification DNA-methylase SE87_RS00490 IPR002052 DNA methylase, N-6 adenine-specific, conserved site SE87_RS00490 IPR002941 DNA methylase N-4/N-6 SE87_RS00490 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS00495 IPR002516 Glycosyl transferase, family 11 SE87_RS00510 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SE87_RS00510 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain SE87_RS00510 IPR016040 NAD(P)-binding domain SE87_RS00510 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site SE87_RS00520 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site SE87_RS00520 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SE87_RS00520 IPR004450 Threonine synthase-like SE87_RS00520 IPR029144 Threonine synthase, N-terminal SE87_RS00525 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain SE87_RS00530 IPR003828 Protein of unknown function DUF208 SE87_RS00535 IPR002718 Outer membrane protein, Helicobacter SE87_RS00540 IPR001173 Glycosyltransferase 2-like SE87_RS00540 IPR029044 Nucleotide-diphospho-sugar transferases SE87_RS00545 IPR003660 HAMP linker domain SE87_RS00545 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain SE87_RS00545 IPR033480 SE87_RS00545 SE87_RS00550 IPR004843 Calcineurin-like phosphoesterase domain, apaH type SE87_RS00550 IPR006146 5'-Nucleotidase, conserved site SE87_RS00550 IPR006179 5'-Nucleotidase/apyrase SE87_RS00550 IPR008334 5'-Nucleotidase, C-terminal SE87_RS00550 IPR029052 Metallo-dependent phosphatase-like SE87_RS00555 IPR003815 S-ribosylhomocysteinase (LuxS) SE87_RS00555 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like SE87_RS00560 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme SE87_RS00560 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 SE87_RS00560 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 SE87_RS00560 IPR015424 Pyridoxal phosphate-dependent transferase SE87_RS00565 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site SE87_RS00565 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SE87_RS00575 IPR012725 Chaperone DnaK SE87_RS00575 IPR013126 Heat shock protein 70 family SE87_RS00575 IPR018181 Heat shock protein 70, conserved site SE87_RS00575 IPR029047 Heat shock protein 70kD, peptide-binding domain SE87_RS00575 IPR029048 Heat shock protein 70kD, C-terminal domain SE87_RS00580 IPR000740 GrpE nucleotide exchange factor SE87_RS00580 IPR009012 GrpE nucleotide exchange factor, head SE87_RS00580 IPR013805 GrpE nucleotide exchange factor, coiled-coil SE87_RS00585 IPR002571 Heat-inducible transcription repressor HrcA SE87_RS00585 IPR011991 Winged helix-turn-helix DNA-binding domain SE87_RS00590 IPR001303 Class II aldolase/adducin N-terminal SE87_RS00600 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like SE87_RS00605 IPR001029 Flagellin, D0/D1 domain SE87_RS00605 IPR001492 Flagellin SE87_RS00605 IPR010810 Flagellin hook, IN motif SE87_RS00610 IPR000380 DNA topoisomerase, type IA SE87_RS00610 IPR003601 DNA topoisomerase, type IA, domain 2 SE87_RS00610 IPR003602 DNA topoisomerase, type IA, DNA-binding domain SE87_RS00610 IPR005733 DNA topoisomerase I, bacterial-type SE87_RS00610 IPR006171 Toprim domain SE87_RS00610 IPR013497 DNA topoisomerase, type IA, central SE87_RS00610 IPR013498 DNA topoisomerase, type IA, zn finger SE87_RS00610 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SE87_RS00610 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 SE87_RS00610 IPR023405 DNA topoisomerase, type IA, core domain SE87_RS00610 IPR023406 DNA topoisomerase, type IA, active site SE87_RS00610 IPR028612 DNA topoisomerase I, type IA SE87_RS00615 IPR007197 Radical SAM SE87_RS00615 IPR013785 Aldolase-type TIM barrel SE87_RS00625 IPR008592 Protein of unknown function DUF874 SE87_RS00630 IPR008592 Protein of unknown function DUF874 SE87_RS00635 IPR000121 PEP-utilising enzyme, C-terminal SE87_RS00635 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding SE87_RS00635 IPR006319 Phosphoenolpyruvate synthase SE87_RS00635 IPR008279 PEP-utilising enzyme, mobile domain SE87_RS00635 IPR013815 ATP-grasp fold, subdomain 1 SE87_RS00635 IPR013816 ATP-grasp fold, subdomain 2 SE87_RS00635 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain SE87_RS00635 IPR018274 PEP-utilising enzyme, active site SE87_RS00635 IPR023151 PEP-utilising enzyme, conserved site SE87_RS00645 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain SE87_RS00645 IPR002320 Threonine-tRNA ligase, class IIa SE87_RS00645 IPR004154 Anticodon-binding SE87_RS00645 IPR012947 Threonyl/alanyl tRNA synthetase, SAD SE87_RS00645 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain SE87_RS00650 IPR001288 Translation initiation factor 3 SE87_RS00650 IPR019813 Translation initiation factor 3, conserved site SE87_RS00650 IPR019814 Translation initiation factor 3, N-terminal SE87_RS00650 IPR019815 Translation initiation factor 3, C-terminal SE87_RS00655 IPR001706 Ribosomal protein L35, non-mitochondrial SE87_RS00655 IPR018265 Ribosomal protein L35, conserved site SE87_RS00655 IPR021137 Ribosomal protein L35 SE87_RS00660 IPR005813 Ribosomal protein L20 SE87_RS00665 IPR002718 Outer membrane protein, Helicobacter SE87_RS00675 IPR009488 Protein of unknown function DUF1104 SE87_RS00690 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form SE87_RS00690 IPR005130 Serine dehydratase-like, alpha subunit SE87_RS00690 IPR005131 Serine dehydratase beta chain SE87_RS00690 IPR029009 Allosteric substrate binding domain SE87_RS00695 IPR004694 Hydroxy amino acid transporter SE87_RS00695 IPR018227 Tryptophan/tyrosine permease SE87_RS00700 IPR002480 DAHP synthetase, class II SE87_RS00710 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant SE87_RS00710 IPR012336 Thioredoxin-like fold SE87_RS00710 IPR024706 Peroxiredoxin, AhpC-type SE87_RS00715 IPR003741 Domain of unknown function DUF162 SE87_RS00715 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain SE87_RS00720 IPR003741 Domain of unknown function DUF162 SE87_RS00720 IPR004452 4Fe-4S binding protein SE87_RS00720 IPR009051 Alpha-helical ferredoxin SE87_RS00720 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SE87_RS00720 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SE87_RS00720 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain SE87_RS00720 IPR024569 4Fe-4S binding protein, C-terminal SE87_RS00725 IPR004017 Cysteine-rich domain SE87_RS00730 IPR003804 L-lactate permease SE87_RS00735 IPR003804 L-lactate permease SE87_RS00740 IPR000445 Helix-hairpin-helix motif SE87_RS00740 IPR003265 HhH-GPD domain SE87_RS00740 IPR011257 DNA glycosylase SE87_RS00740 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal SE87_RS00750 IPR000883 Cytochrome c oxidase subunit I SE87_RS00750 IPR004677 Cytochrome c oxidase cbb3-type, subunit I SE87_RS00750 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site SE87_RS00750 IPR023616 Cytochrome c oxidase, subunit I domain SE87_RS00755 IPR000883 Cytochrome c oxidase subunit I SE87_RS00755 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO SE87_RS00755 IPR009056 Cytochrome c-like domain SE87_RS00760 IPR008621 Cbb3-type cytochrome oxidase component SE87_RS00760 IPR014107 Cytochrome c oxidase cbb3-type, CcoQ SE87_RS00765 IPR004678 Cytochrome c oxidase cbb3-type, subunit III SE87_RS00765 IPR009056 Cytochrome c-like domain SE87_RS00765 IPR032858 SE87_RS00765 SE87_RS00770 IPR025065 Protein of unknown function DUF4006 SE87_RS00790 IPR003773 Menaquinone biosynthesis enzyme SE87_RS00790 IPR030869 SE87_RS00790 SE87_RS00795 IPR003593 AAA+ ATPase domain SE87_RS00795 IPR013765 DNA recombination and repair protein RecA SE87_RS00795 IPR020584 DNA recombination/repair protein RecA, conserved site SE87_RS00795 IPR023400 DNA recombination and repair protein RecA, C-terminal SE87_RS00795 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS00800 IPR000941 Enolase SE87_RS00800 IPR020809 Enolase, conserved site SE87_RS00800 IPR020810 Enolase, C-terminal SE87_RS00800 IPR020811 Enolase, N-terminal SE87_RS00800 IPR029017 Enolase N-terminal domain-like SE87_RS00800 IPR029065 Enolase C-terminal domain-like SE87_RS00810 IPR021731 AMIN domain SE87_RS00815 IPR000623 Shikimate kinase/Threonine synthase-like 1 SE87_RS00815 IPR023000 Shikimate kinase, conserved site SE87_RS00815 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS00815 IPR031322 SE87_RS00815 SE87_RS00820 IPR029151 Periplasmic sensor domain-like SE87_RS00825 IPR002495 Glycosyl transferase, family 8 SE87_RS00825 IPR029044 Nucleotide-diphospho-sugar transferases SE87_RS00830 IPR006597 Sel1-like SE87_RS00830 IPR011990 Tetratricopeptide-like helical domain SE87_RS00840 IPR002876 Transcriptional regulator TACO1-like SE87_RS00840 IPR017856 Integrase, N-terminal zinc-binding domain-like SE87_RS00840 IPR026563 Transcriptional regulator TACO1-like, domain 2 SE87_RS00840 IPR026564 Transcriptional regulator TACO1-like, domain 3 SE87_RS00840 IPR029072 YebC-like SE87_RS00845 IPR001731 Porphobilinogen synthase SE87_RS00845 IPR013785 Aldolase-type TIM barrel SE87_RS00845 IPR030656 SE87_RS00845 SE87_RS00850 IPR003594 Histidine kinase-like ATPase, C-terminal domain SE87_RS00850 IPR003660 HAMP linker domain SE87_RS00850 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain SE87_RS00855 IPR001789 Signal transduction response regulator, receiver domain SE87_RS00855 IPR001867 Signal transduction response regulator, C-terminal SE87_RS00855 IPR011006 CheY-like superfamily SE87_RS00855 IPR011991 Winged helix-turn-helix DNA-binding domain SE87_RS00855 IPR016032 Signal transduction response regulator, C-terminal effector SE87_RS00865 IPR011990 Tetratricopeptide-like helical domain SE87_RS00870 IPR001539 Peptidase U32 SE87_RS00880 IPR000352 Peptide chain release factor class I/class II SE87_RS00880 IPR004374 Peptide chain release factor 2 SE87_RS00880 IPR005139 Peptide chain release factor SE87_RS00880 IPR014720 Double-stranded RNA-binding domain SE87_RS00880 IPR020853 Peptide chain release factor 2, bacterial SE87_RS00885 IPR001453 Molybdopterin binding domain SE87_RS00885 IPR005110 MoeA, N-terminal and linker domain SE87_RS00885 IPR008284 Molybdenum cofactor biosynthesis, conserved site SE87_RS00890 IPR002010 Type III secretion system inner membrane R protein SE87_RS00890 IPR006303 Flagellar biosynthesis protein FliR SE87_RS00905 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type SE87_RS00905 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site SE87_RS00905 IPR027304 Trigger factor/SurA domain SE87_RS00910 IPR000771 Ketose-bisphosphate aldolase, class-II SE87_RS00910 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 SE87_RS00910 IPR013785 Aldolase-type TIM barrel SE87_RS00915 IPR001059 Translation elongation factor P/YeiP, central SE87_RS00915 IPR008991 Translation protein SH3-like domain SE87_RS00915 IPR011768 Translation elongation factor P SE87_RS00915 IPR012340 Nucleic acid-binding, OB-fold SE87_RS00915 IPR013185 Translation elongation factor, KOW-like SE87_RS00915 IPR013852 Translation elongation factor P/YeiP, conserved site SE87_RS00915 IPR014722 Ribosomal protein L2 domain 2 SE87_RS00915 IPR015365 Elongation factor P, C-terminal SE87_RS00915 IPR020599 Translation elongation factor P/YeiP SE87_RS00920 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal SE87_RS00920 IPR013132 N-acetylneuraminic acid synthase, N-terminal SE87_RS00920 IPR013785 Aldolase-type TIM barrel SE87_RS00920 IPR013974 SAF domain SE87_RS00920 IPR020030 Pseudaminic acid biosynthesis, PseI SE87_RS00925 IPR003439 ABC transporter-like SE87_RS00925 IPR003593 AAA+ ATPase domain SE87_RS00925 IPR017871 ABC transporter, conserved site SE87_RS00925 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS00930 IPR003010 Carbon-nitrogen hydrolase SE87_RS00930 IPR004563 Apolipoprotein N-acyltransferase SE87_RS00935 IPR003825 Colicin V production, CvpA SE87_RS00940 IPR002313 Lysine-tRNA ligase, class II SE87_RS00940 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) SE87_RS00940 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type SE87_RS00940 IPR012340 Nucleic acid-binding, OB-fold SE87_RS00940 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal SE87_RS00940 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like SE87_RS00945 IPR001085 Serine hydroxymethyltransferase SE87_RS00945 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 SE87_RS00945 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 SE87_RS00945 IPR015424 Pyridoxal phosphate-dependent transferase SE87_RS00945 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site SE87_RS00950 IPR015061 Domain of unknown function DUF1882 SE87_RS00960 IPR011089 Domain of unknown function DUF1524 SE87_RS00965 IPR004919 Domain of unknown function DUF262 SE87_RS00975 IPR005134 Uncharacterised protein family UPF0114 SE87_RS00975 IPR020761 Uncharacterised protein family UPF0114, bacteria SE87_RS00975 IPR020765 Uncharacterised protein family UPF0114, gammaproteobacteria SE87_RS00980 IPR001736 Phospholipase D/Transphosphatidylase SE87_RS00980 IPR025202 Phospholipase D-like domain SE87_RS00985 IPR001041 2Fe-2S ferredoxin-type domain SE87_RS00985 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein SE87_RS00985 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site SE87_RS00985 IPR009051 Alpha-helical ferredoxin SE87_RS00985 IPR012675 Beta-grasp domain SE87_RS00985 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SE87_RS00985 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SE87_RS00985 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal SE87_RS00990 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site SE87_RS00990 IPR003953 FAD binding domain SE87_RS00990 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal SE87_RS00990 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain SE87_RS00990 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SE87_RS00990 IPR030664 SE87_RS00990 SE87_RS00995 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit SE87_RS00995 IPR004224 Fumarate reductase respiratory complex, transmembrane subunit SE87_RS01000 IPR000652 Triosephosphate isomerase SE87_RS01000 IPR013785 Aldolase-type TIM barrel SE87_RS01000 IPR020861 Triosephosphate isomerase, active site SE87_RS01000 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic SE87_RS01005 IPR002347 Glucose/ribitol dehydrogenase SE87_RS01005 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) SE87_RS01005 IPR016040 NAD(P)-binding domain SE87_RS01010 IPR001451 Bacterial transferase hexapeptide repeat SE87_RS01010 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase SE87_RS01010 IPR011004 Trimeric LpxA-like SE87_RS01010 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region SE87_RS01015 IPR002133 S-adenosylmethionine synthetase SE87_RS01015 IPR022628 S-adenosylmethionine synthetase, N-terminal SE87_RS01015 IPR022629 S-adenosylmethionine synthetase, central domain SE87_RS01015 IPR022630 S-adenosylmethionine synthetase, C-terminal SE87_RS01015 IPR022631 S-adenosylmethionine synthetase, conserved site SE87_RS01015 IPR022636 S-adenosylmethionine synthetase superfamily SE87_RS01020 IPR001564 Nucleoside diphosphate kinase SE87_RS01020 IPR023005 Nucleoside diphosphate kinase, active site SE87_RS01030 IPR002677 Ribosomal protein L32p SE87_RS01030 IPR011332 Zinc-binding ribosomal protein SE87_RS01035 IPR003664 Fatty acid synthesis PlsX protein SE87_RS01035 IPR012281 Phospholipid biosynthesis protein, PlsX-like SE87_RS01035 IPR024084 Isopropylmalate dehydrogenase-like domain SE87_RS01040 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 SE87_RS01040 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal SE87_RS01040 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SE87_RS01040 IPR016039 Thiolase-like SE87_RS01065 IPR000808 Mrp, conserved site SE87_RS01065 IPR002744 Domain of unknown function DUF59 SE87_RS01065 IPR019591 Mrp/NBP35 ATP-binding protein SE87_RS01065 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS01070 IPR002495 Glycosyl transferase, family 8 SE87_RS01070 IPR029044 Nucleotide-diphospho-sugar transferases SE87_RS01075 IPR029044 Nucleotide-diphospho-sugar transferases SE87_RS01080 IPR003678 Putative outer membrane protein SE87_RS01085 IPR001404 Heat shock protein Hsp90 family SE87_RS01085 IPR003594 Histidine kinase-like ATPase, C-terminal domain SE87_RS01085 IPR019805 Heat shock protein Hsp90, conserved site SE87_RS01085 IPR020568 Ribosomal protein S5 domain 2-type fold SE87_RS01085 IPR020575 Heat shock protein Hsp90, N-terminal SE87_RS01090 IPR006597 Sel1-like SE87_RS01090 IPR011990 Tetratricopeptide-like helical domain SE87_RS01090 IPR019734 Tetratricopeptide repeat SE87_RS01095 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site SE87_RS01095 IPR002933 Peptidase M20 SE87_RS01095 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria SE87_RS01095 IPR011650 Peptidase M20, dimerisation domain SE87_RS01100 IPR002218 Glucose-inhibited division protein A-related SE87_RS01100 IPR004416 Glucose-inhibited division protein A SE87_RS01100 IPR020595 Glucose-inhibited division protein A-related, conserved site SE87_RS01100 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain SE87_RS01100 IPR026904 GidA associated domain 3 SE87_RS01105 IPR001898 Sodium/sulphate symporter SE87_RS01110 IPR000374 Phosphatidate cytidylyltransferase SE87_RS01115 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase SE87_RS01115 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal SE87_RS01115 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal SE87_RS01115 IPR016040 NAD(P)-binding domain SE87_RS01115 IPR026877 DXP reductoisomerase C-terminal domain SE87_RS01125 IPR010446 Beta-1,4-N-acetylgalactosaminyltransferase SE87_RS01130 IPR005247 YbhB/YbcL SE87_RS01130 IPR008914 Phosphatidylethanolamine-binding protein PEBP SE87_RS01140 IPR000192 Aminotransferase class V domain SE87_RS01140 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 SE87_RS01140 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 SE87_RS01140 IPR015424 Pyridoxal phosphate-dependent transferase SE87_RS01140 IPR016454 Cysteine desulfurase, NifS SE87_RS01140 IPR017773 Cysteine desulfurase, NifS, proteobacteria SE87_RS01145 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal SE87_RS01145 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal SE87_RS01145 IPR007419 BFD-like [2Fe-2S]-binding domain SE87_RS01145 IPR016217 Nitrogen fixation, NifU SE87_RS01150 IPR010985 Ribbon-helix-helix SE87_RS01150 IPR031895 SE87_RS01150 SE87_RS01155 IPR003593 AAA+ ATPase domain SE87_RS01155 IPR004504 DNA repair protein RadA SE87_RS01155 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SE87_RS01155 IPR020568 Ribosomal protein S5 domain 2-type fold SE87_RS01155 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS01160 IPR002569 Peptide methionine sulphoxide reductase MsrA SE87_RS01160 IPR002579 Peptide methionine sulphoxide reductase MrsB SE87_RS01160 IPR011057 Mss4-like SE87_RS01160 IPR028427 Peptide methionine sulfoxide reductase SE87_RS01165 IPR002781 Transmembrane protein TauE like SE87_RS01170 IPR002718 Outer membrane protein, Helicobacter SE87_RS01175 IPR001902 Sulphate anion transporter SE87_RS01175 IPR011547 Sulphate transporter SE87_RS01185 IPR002718 Outer membrane protein, Helicobacter SE87_RS01190 IPR003329 Acylneuraminate cytidylyltransferase SE87_RS01190 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase SE87_RS01190 IPR029044 Nucleotide-diphospho-sugar transferases SE87_RS01195 IPR012336 Thioredoxin-like fold SE87_RS01200 IPR020913 Uncharacterised protein family UPF0323 SE87_RS01205 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain SE87_RS01205 IPR016185 Pre-ATP-grasp domain SE87_RS01215 IPR006597 Sel1-like SE87_RS01215 IPR011990 Tetratricopeptide-like helical domain SE87_RS01215 IPR019734 Tetratricopeptide repeat SE87_RS01220 IPR009056 Cytochrome c-like domain SE87_RS01225 IPR000860 Tetrapyrrole biosynthesis, hydroxymethylbilane synthase SE87_RS01225 IPR022417 Porphobilinogen deaminase, N-terminal SE87_RS01225 IPR022418 Porphobilinogen deaminase, C-terminal SE87_RS01225 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site SE87_RS01230 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain SE87_RS01230 IPR002316 Proline-tRNA ligase, class IIa SE87_RS01230 IPR004154 Anticodon-binding SE87_RS01230 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type SE87_RS01230 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain SE87_RS01230 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 SE87_RS01235 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase SE87_RS01235 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase SE87_RS01235 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal SE87_RS01235 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain SE87_RS01235 IPR016040 NAD(P)-binding domain SE87_RS01235 IPR018214 Glutamyl-tRNA reductase, conserved site SE87_RS01240 IPR000092 Polyprenyl synthetase SE87_RS01240 IPR008949 Terpenoid synthase SE87_RS01240 IPR017446 Polyprenyl synthetase-related SE87_RS01250 IPR018563 Protein of unknown function DUF2018 SE87_RS01250 IPR023126 HP0242-like domain SE87_RS01255 IPR002177 DNA-binding protein Dps SE87_RS01255 IPR008331 Ferritin/DPS protein domain SE87_RS01255 IPR009078 Ferritin-like superfamily SE87_RS01255 IPR012347 Ferritin-related SE87_RS01255 IPR023188 DNA-binding protein Dps, conserved site SE87_RS01260 IPR003594 Histidine kinase-like ATPase, C-terminal domain SE87_RS01260 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain SE87_RS01260 IPR004358 Signal transduction histidine kinase-related protein, C-terminal SE87_RS01265 IPR016511 Uncharacterised conserved protein UCP007248 SE87_RS01270 IPR001782 Flagellar P-ring protein SE87_RS01275 IPR001650 Helicase, C-terminal SE87_RS01275 IPR011545 DEAD/DEAH box helicase domain SE87_RS01275 IPR014001 Helicase, superfamily 1/2, ATP-binding domain SE87_RS01275 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS01280 IPR000163 Prohibitin SE87_RS01280 IPR001107 Band 7 protein SE87_RS01280 IPR001972 Stomatin family SE87_RS01285 IPR013417 Conserved hypothetical protein CHP02588 SE87_RS01290 IPR003439 ABC transporter-like SE87_RS01290 IPR003593 AAA+ ATPase domain SE87_RS01290 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal SE87_RS01290 IPR017871 ABC transporter, conserved site SE87_RS01290 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS01295 IPR000515 MetI-like domain SE87_RS01295 IPR025966 Oligopeptide transport permease C-like, N-terminal domain SE87_RS01305 IPR002718 Outer membrane protein, Helicobacter SE87_RS01310 IPR002718 Outer membrane protein, Helicobacter SE87_RS01315 IPR001114 Adenylosuccinate synthetase SE87_RS01315 IPR018220 Adenylosuccinate synthase, active site SE87_RS01315 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS01315 IPR033128 SE87_RS01315 SE87_RS01320 IPR012823 Flagellar export FliJ SE87_RS01325 IPR006668 Magnesium transporter, MgtE intracellular domain SE87_RS01330 IPR001478 PDZ domain SE87_RS01330 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase SE87_RS01330 IPR008915 Peptidase M50 SE87_RS01335 IPR003753 Exonuclease VII, large subunit SE87_RS01335 IPR012340 Nucleic acid-binding, OB-fold SE87_RS01335 IPR020579 Exonuclease VII, large subunit, C-terminal SE87_RS01335 IPR025824 OB-fold nucleic acid binding domain SE87_RS01340 IPR002052 DNA methylase, N-6 adenine-specific, conserved site SE87_RS01340 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class SE87_RS01340 IPR002941 DNA methylase N-4/N-6 SE87_RS01340 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS01355 IPR001091 Restriction/modification DNA-methylase SE87_RS01355 IPR002941 DNA methylase N-4/N-6 SE87_RS01355 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS01360 IPR001270 ClpA/B family SE87_RS01360 IPR003593 AAA+ ATPase domain SE87_RS01360 IPR003959 ATPase, AAA-type, core SE87_RS01360 IPR004176 Clp, N-terminal SE87_RS01360 IPR018368 ClpA/B, conserved site 1 SE87_RS01360 IPR019489 Clp ATPase, C-terminal SE87_RS01360 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS01360 IPR028299 ClpA/B, conserved site 2 SE87_RS01365 IPR003834 Cytochrome c assembly protein, transmembrane domain SE87_RS01370 IPR006680 Amidohydrolase 1 SE87_RS01370 IPR011059 Metal-dependent hydrolase, composite domain SE87_RS01370 IPR032466 SE87_RS01370 SE87_RS01375 IPR006680 Amidohydrolase 1 SE87_RS01375 IPR011059 Metal-dependent hydrolase, composite domain SE87_RS01375 IPR032466 SE87_RS01375 SE87_RS01385 IPR005839 Methylthiotransferase SE87_RS01385 IPR006463 tRNA-i(6)A37 modification enzyme MiaB SE87_RS01385 IPR006638 Elongator protein 3/MiaB/NifB SE87_RS01385 IPR007197 Radical SAM SE87_RS01385 IPR013848 Methylthiotransferase, N-terminal SE87_RS01385 IPR020612 Methylthiotransferase, conserved site SE87_RS01385 IPR023404 Radical SAM, alpha/beta horseshoe SE87_RS01385 IPR023970 Methylthiotransferase/radical SAM-type protein SE87_RS01390 IPR007172 Domain of unknown function DUF374 SE87_RS01410 IPR005358 Putative zinc- or iron-chelating domain containing protein SE87_RS01415 IPR002885 Pentatricopeptide repeat SE87_RS01415 IPR011990 Tetratricopeptide-like helical domain SE87_RS01420 IPR011060 Ribulose-phosphate binding barrel SE87_RS01420 IPR013785 Aldolase-type TIM barrel SE87_RS01420 IPR013798 Indole-3-glycerol phosphate synthase SE87_RS01425 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SE87_RS01425 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SE87_RS01430 IPR003695 Ppx/GppA phosphatase SE87_RS01430 IPR030673 SE87_RS01430 SE87_RS01435 IPR002201 Glycosyl transferase, family 9 SE87_RS01435 IPR011908 Lipopolysaccharide heptosyltransferase I SE87_RS01440 IPR004960 Bacterial lipid A biosynthesis acyltransferase SE87_RS01445 IPR002616 tRNA-guanine(15) transglycosylase-like SE87_RS01445 IPR004803 Queuine tRNA-ribosyltransferase SE87_RS01450 IPR006037 Regulator of K+ conductance, C-terminal SE87_RS01455 IPR016037 3-dehydroquinate synthase AroB SE87_RS01455 IPR030960 SE87_RS01455 SE87_RS01455 IPR030963 SE87_RS01455 SE87_RS01460 IPR006685 Mechanosensitive ion channel MscS SE87_RS01460 IPR010920 Like-Sm (LSM) domain SE87_RS01465 IPR005839 Methylthiotransferase SE87_RS01465 IPR006467 MiaB-like tRNA modifying enzyme SE87_RS01465 IPR006638 Elongator protein 3/MiaB/NifB SE87_RS01465 IPR007197 Radical SAM SE87_RS01465 IPR013848 Methylthiotransferase, N-terminal SE87_RS01465 IPR020612 Methylthiotransferase, conserved site SE87_RS01465 IPR023404 Radical SAM, alpha/beta horseshoe SE87_RS01465 IPR023970 Methylthiotransferase/radical SAM-type protein SE87_RS01470 IPR003593 AAA+ ATPase domain SE87_RS01470 IPR003959 ATPase, AAA-type, core SE87_RS01470 IPR003960 ATPase, AAA-type, conserved site SE87_RS01470 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS01475 IPR029058 Alpha/Beta hydrolase fold SE87_RS01480 IPR025423 Domain of unknown function DUF4149 SE87_RS01485 IPR004311 Vacuolating cytotoxin, putative SE87_RS01485 IPR005546 Autotransporter beta-domain SE87_RS01490 IPR000183 Ornithine/DAP/Arg decarboxylase SE87_RS01490 IPR002986 Diaminopimelate decarboxylase, LysA SE87_RS01490 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal SE87_RS01490 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal SE87_RS01490 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal SE87_RS01490 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site SE87_RS01490 IPR029066 PLP-binding barrel SE87_RS01495 IPR002701 Chorismate mutase SE87_RS01495 IPR020822 Chorismate mutase, type II SE87_RS01500 IPR016181 Acyl-CoA N-acyltransferase SE87_RS01500 IPR016732 Uncharacterised conserved protein UCP018688 SE87_RS01500 IPR024320 Lysylphosphatidylglycerol synthetase, domain of unknown function DUF2156 SE87_RS01505 IPR001544 Aminotransferase, class IV SE87_RS01505 IPR005801 ADC synthase SE87_RS01505 IPR015890 Chorismate binding, C-terminal SE87_RS01505 IPR019999 Anthranilate synthase component I - like SE87_RS01510 IPR003010 Carbon-nitrogen hydrolase SE87_RS01510 IPR023719 Aliphatic amidase SE87_RS01515 IPR001029 Flagellin, D0/D1 domain SE87_RS01520 IPR001787 Ribosomal protein L21 SE87_RS01520 IPR018258 Ribosomal protein L21, conserved site SE87_RS01520 IPR028909 Ribosomal protein L21-like SE87_RS01525 IPR001684 Ribosomal protein L27 SE87_RS01525 IPR018261 Ribosomal protein L27, conserved site SE87_RS01530 IPR000914 Bacterial extracellular solute-binding protein, family 5 SE87_RS01530 IPR030678 SE87_RS01530 SE87_RS01535 IPR000515 MetI-like domain SE87_RS01540 IPR000515 MetI-like domain SE87_RS01540 IPR025966 Oligopeptide transport permease C-like, N-terminal domain SE87_RS01545 IPR003439 ABC transporter-like SE87_RS01545 IPR003593 AAA+ ATPase domain SE87_RS01545 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal SE87_RS01545 IPR017871 ABC transporter, conserved site SE87_RS01545 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS01550 IPR003439 ABC transporter-like SE87_RS01550 IPR003593 AAA+ ATPase domain SE87_RS01550 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal SE87_RS01550 IPR017871 ABC transporter, conserved site SE87_RS01550 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS01555 IPR006073 GTP binding domain SE87_RS01555 IPR006074 GTP1/OBG, conserved site SE87_RS01555 IPR006169 GTP1/OBG domain SE87_RS01555 IPR014100 GTP-binding protein Obg/CgtA SE87_RS01555 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS01560 IPR008397 Alginate lyase domain SE87_RS01560 IPR008929 Chondroitin AC/alginate lyase SE87_RS01565 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SE87_RS01570 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase SE87_RS01570 IPR005814 Aminotransferase class-III SE87_RS01570 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 SE87_RS01570 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 SE87_RS01570 IPR015424 Pyridoxal phosphate-dependent transferase SE87_RS01575 IPR032820 SE87_RS01575 SE87_RS01585 IPR003010 Carbon-nitrogen hydrolase SE87_RS01590 IPR002509 Polysaccharide deacetylase SE87_RS01590 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel SE87_RS01600 IPR003495 CobW/HypB/UreG domain SE87_RS01600 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal SE87_RS01600 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS01605 IPR010645 Domain of unknown function DUF1228 SE87_RS01605 IPR020846 Major facilitator superfamily domain SE87_RS01610 IPR016368 Virulence-associated protein D SE87_RS01610 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 SE87_RS01625 IPR002718 Outer membrane protein, Helicobacter SE87_RS01630 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain SE87_RS01630 IPR012349 FMN-binding split barrel SE87_RS01630 IPR019595 Domain of unknown function DUF2470 SE87_RS01630 IPR026324 Haem oxygenase, HugZ SE87_RS01635 IPR001278 Arginine-tRNA ligase SE87_RS01635 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site SE87_RS01635 IPR005148 Arginyl tRNA synthetase N-terminal domain SE87_RS01635 IPR008909 DALR anticodon binding SE87_RS01635 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding SE87_RS01635 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SE87_RS01640 IPR003369 Sec-independent protein translocase protein TatA/B/E SE87_RS01640 IPR006312 Sec-independent protein translocase protein TatA/E SE87_RS01645 IPR008145 Guanylate kinase/L-type calcium channel beta subunit SE87_RS01645 IPR017665 Guanylate kinase SE87_RS01645 IPR020590 Guanylate kinase, conserved site SE87_RS01645 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS01655 IPR001736 Phospholipase D/Transphosphatidylase SE87_RS01655 IPR025202 Phospholipase D-like domain SE87_RS01660 IPR002718 Outer membrane protein, Helicobacter SE87_RS01665 IPR000527 Flagellar L-ring protein SE87_RS01670 IPR003329 Acylneuraminate cytidylyltransferase SE87_RS01670 IPR020039 Pseudaminic acid biosynthesis, PseF SE87_RS01670 IPR029044 Nucleotide-diphospho-sugar transferases SE87_RS01680 IPR016181 Acyl-CoA N-acyltransferase SE87_RS01680 IPR020036 Pseudaminic acid biosynthesis, PseH SE87_RS01685 IPR003758 Tetraacyldisaccharide 4'-kinase SE87_RS01690 IPR003694 NAD(+) synthetase SE87_RS01690 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SE87_RS01690 IPR022310 NAD/GMP synthase SE87_RS01690 IPR022926 NH(3)-dependent NAD(+) synthetase SE87_RS01700 IPR000506 Acetohydroxy acid isomeroreductase C-terminal SE87_RS01700 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like SE87_RS01700 IPR013023 Acetohydroxy acid isomeroreductase SE87_RS01700 IPR013116 Acetohydroxy acid isomeroreductase, catalytic SE87_RS01700 IPR013328 Dehydrogenase, multihelical SE87_RS01700 IPR016040 NAD(P)-binding domain SE87_RS01705 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain SE87_RS01705 IPR010223 ATP binding protein MinD, bacterial-type SE87_RS01705 IPR025501 ATP binding protein MinD SE87_RS01705 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS01710 IPR005527 Septum formation topological specificity factor MinE SE87_RS01715 IPR003488 DNA recombination-mediator protein A SE87_RS01720 IPR005227 Resolvase, holliday junction-type, YqgF-like SE87_RS01720 IPR006641 YqgF/RNase H-like domain SE87_RS01720 IPR012337 Ribonuclease H-like domain SE87_RS01730 IPR006597 Sel1-like SE87_RS01730 IPR011990 Tetratricopeptide-like helical domain SE87_RS01745 IPR023346 Lysozyme-like domain SE87_RS01745 IPR023347 Lysozyme domain SE87_RS01760 IPR010718 Protein of unknown function DUF1294 SE87_RS01785 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F SE87_RS01785 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site SE87_RS01785 IPR020103 Pseudouridine synthase, catalytic domain SE87_RS01790 IPR001667 DDH domain SE87_RS01790 IPR003156 DHHA1 domain SE87_RS01790 IPR004610 Bacterial RecJ exonuclease SE87_RS01795 IPR004468 CTP synthase SE87_RS01795 IPR017456 CTP synthase, N-terminal SE87_RS01795 IPR017926 Glutamine amidotransferase SE87_RS01795 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS01795 IPR029062 Class I glutamine amidotransferase-like SE87_RS01800 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SE87_RS01805 IPR000067 Flagellar M-ring protein FliF SE87_RS01805 IPR006182 Secretory protein YscJ/FliF SE87_RS01805 IPR013556 Flagellar M-ring C-terminal SE87_RS01810 IPR000090 Flagellar motor switch protein FliG SE87_RS01810 IPR011002 Flagellar motor switch protein FliG, alpha-helical SE87_RS01810 IPR023087 SE87_RS01810 SE87_RS01810 IPR028263 Flagellar motor switch protein FliG, N-terminal domain SE87_RS01810 IPR032779 SE87_RS01810 SE87_RS01815 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE SE87_RS01820 IPR005474 Transketolase, N-terminal SE87_RS01820 IPR005475 Transketolase-like, pyrimidine-binding domain SE87_RS01820 IPR005477 Deoxyxylulose-5-phosphate synthase SE87_RS01820 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II SE87_RS01820 IPR020826 Transketolase binding site SE87_RS01820 IPR029061 Thiamin diphosphate-binding fold SE87_RS01820 IPR033247 SE87_RS01820 SE87_RS01820 IPR033248 SE87_RS01820 SE87_RS01825 IPR000640 Translation elongation factor EFG, V domain SE87_RS01825 IPR000795 Elongation factor, GTP-binding domain SE87_RS01825 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 SE87_RS01825 IPR005225 Small GTP-binding protein domain SE87_RS01825 IPR006297 Elongation factor 4 SE87_RS01825 IPR009000 Translation protein, beta-barrel domain SE87_RS01825 IPR009022 Elongation factor G, III-V domain SE87_RS01825 IPR013842 GTP-binding protein LepA, C-terminal SE87_RS01825 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS01825 IPR031157 SE87_RS01825 SE87_RS01830 IPR024975 Domain of unknown function DUF3883 SE87_RS01835 IPR002347 Glucose/ribitol dehydrogenase SE87_RS01835 IPR016040 NAD(P)-binding domain SE87_RS01835 IPR020904 Short-chain dehydrogenase/reductase, conserved site SE87_RS01855 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain SE87_RS01855 IPR005886 UDP-glucose 4-epimerase GalE SE87_RS01855 IPR016040 NAD(P)-binding domain SE87_RS01860 IPR001406 Pseudouridine synthase I, TruA SE87_RS01860 IPR020094 Pseudouridine synthase I, TruA, N-terminal SE87_RS01860 IPR020095 Pseudouridine synthase I, TruA, C-terminal SE87_RS01860 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain SE87_RS01860 IPR020103 Pseudouridine synthase, catalytic domain SE87_RS01865 IPR005495 Permease YjgP/YjgQ, predicted SE87_RS01870 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase SE87_RS01870 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS01875 IPR000358 Ribonucleotide reductase small subunit SE87_RS01875 IPR009078 Ferritin-like superfamily SE87_RS01875 IPR012348 Ribonucleotide reductase-related SE87_RS01875 IPR030475 SE87_RS01875 SE87_RS01885 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SE87_RS01885 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 SE87_RS01885 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 SE87_RS01885 IPR015424 Pyridoxal phosphate-dependent transferase SE87_RS01885 IPR020026 Pseudaminic acid biosynthesis, PseC SE87_RS01905 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase SE87_RS01905 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain SE87_RS01905 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal SE87_RS01905 IPR005482 Biotin carboxylase, C-terminal SE87_RS01905 IPR011054 Rudiment single hybrid motif SE87_RS01905 IPR013815 ATP-grasp fold, subdomain 1 SE87_RS01905 IPR013816 ATP-grasp fold, subdomain 2 SE87_RS01905 IPR016185 Pre-ATP-grasp domain SE87_RS01910 IPR000089 Biotin/lipoyl attachment SE87_RS01910 IPR001249 Acetyl-CoA biotin carboxyl carrier SE87_RS01910 IPR011053 Single hybrid motif SE87_RS01915 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase SE87_RS01915 IPR011962 Deoxycytidine triphosphate deaminase SE87_RS01915 IPR029054 dUTPase-like SE87_RS01920 IPR002718 Outer membrane protein, Helicobacter SE87_RS01925 IPR006700 Ribosomal RNA small subunit methyltransferase E SE87_RS01925 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SE87_RS01925 IPR029028 Alpha/beta knot methyltransferases SE87_RS01935 IPR001015 Ferrochelatase SE87_RS01935 IPR019772 Ferrochelatase, active site SE87_RS01940 IPR012336 Thioredoxin-like fold SE87_RS01945 IPR002541 Cytochrome c assembly protein SE87_RS01945 IPR007816 ResB-like domain SE87_RS01950 IPR001503 Glycosyl transferase, family 10 SE87_RS01950 IPR016646 Alpha-(1, 3)-fucosyltransferase/alpha-(1, 4)-fucosyltransferase, helicobacter SE87_RS01955 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase SE87_RS01955 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal SE87_RS01955 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain SE87_RS01955 IPR014362 Glutamate dehydrogenase SE87_RS01955 IPR016040 NAD(P)-binding domain SE87_RS01960 IPR002052 DNA methylase, N-6 adenine-specific, conserved site SE87_RS01960 IPR004556 Modification methylase HemK SE87_RS01960 IPR007848 Methyltransferase small domain SE87_RS01960 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS01965 IPR001915 Peptidase M48 SE87_RS01965 IPR027057 CAAX prenyl protease 1 SE87_RS01965 IPR032456 SE87_RS01965 SE87_RS01975 IPR007730 Sporulation-related domain SE87_RS01990 IPR001650 Helicase, C-terminal SE87_RS01990 IPR005259 Primosomal protein n SE87_RS01990 IPR011545 DEAD/DEAH box helicase domain SE87_RS01990 IPR014001 Helicase, superfamily 1/2, ATP-binding domain SE87_RS01990 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS01995 IPR005271 tRNA (cmo5U34)-methyltransferase SE87_RS01995 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS02000 IPR001189 Manganese/iron superoxide dismutase SE87_RS02000 IPR019831 Manganese/iron superoxide dismutase, N-terminal SE87_RS02000 IPR019832 Manganese/iron superoxide dismutase, C-terminal SE87_RS02000 IPR019833 Manganese/iron superoxide dismutase, binding site SE87_RS02005 IPR002065 Putative thiol peroxidase Tpx SE87_RS02005 IPR012336 Thioredoxin-like fold SE87_RS02005 IPR013740 Redoxin SE87_RS02005 IPR018219 Thiol peroxidase conserved site SE87_RS02010 IPR002545 CheW-like protein SE87_RS02015 IPR001789 Signal transduction response regulator, receiver domain SE87_RS02015 IPR002545 CheW-like protein SE87_RS02015 IPR003594 Histidine kinase-like ATPase, C-terminal domain SE87_RS02015 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain SE87_RS02015 IPR004105 Histidine kinase CheA-like, homodimeric domain SE87_RS02015 IPR004358 Signal transduction histidine kinase-related protein, C-terminal SE87_RS02015 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain SE87_RS02015 IPR011006 CheY-like superfamily SE87_RS02020 IPR001789 Signal transduction response regulator, receiver domain SE87_RS02020 IPR002545 CheW-like protein SE87_RS02020 IPR011006 CheY-like superfamily SE87_RS02020 IPR024181 Chemotaxis response regulator CheV SE87_RS02025 IPR004843 Calcineurin-like phosphoesterase domain, apaH type SE87_RS02025 IPR029052 Metallo-dependent phosphatase-like SE87_RS02030 IPR001608 Alanine racemase, N-terminal SE87_RS02030 IPR011078 Uncharacterised protein family UPF0001 SE87_RS02030 IPR029066 PLP-binding barrel SE87_RS02035 IPR002830 UbiD decarboxylyase family SE87_RS02035 IPR012349 FMN-binding split barrel SE87_RS02035 IPR022390 Menaquinone biosynthesis decarboxylase, SCO4490 SE87_RS02040 IPR002912 ACT domain SE87_RS02040 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SE87_RS02040 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain SE87_RS02040 IPR006236 D-3-phosphoglycerate dehydrogenase SE87_RS02040 IPR016040 NAD(P)-binding domain SE87_RS02040 IPR029009 Allosteric substrate binding domain SE87_RS02040 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 SE87_RS02050 IPR000110 Ribosomal protein S1 SE87_RS02050 IPR003029 Ribosomal protein S1, RNA-binding domain SE87_RS02050 IPR012340 Nucleic acid-binding, OB-fold SE87_RS02050 IPR022967 RNA-binding domain, S1 SE87_RS02055 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase SE87_RS02060 IPR001986 Enolpyruvate transferase domain SE87_RS02060 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase SE87_RS02060 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta SE87_RS02060 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site SE87_RS02065 IPR002547 tRNA-binding domain SE87_RS02065 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit SE87_RS02065 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding SE87_RS02065 IPR005147 tRNA synthetase, B5-domain SE87_RS02065 IPR009061 DNA binding domain, putative SE87_RS02065 IPR012340 Nucleic acid-binding, OB-fold SE87_RS02070 IPR002319 Phenylalanyl-tRNA synthetase SE87_RS02070 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal SE87_RS02070 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit SE87_RS02070 IPR010978 tRNA-binding arm SE87_RS02070 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial SE87_RS02075 IPR001310 Histidine triad (HIT) protein SE87_RS02075 IPR011146 HIT-like domain SE87_RS02075 IPR019808 Histidine triad, conserved site SE87_RS02080 IPR000192 Aminotransferase class V domain SE87_RS02080 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 SE87_RS02080 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 SE87_RS02080 IPR015424 Pyridoxal phosphate-dependent transferase SE87_RS02085 IPR025002 Domain of unknown function DUF3972 SE87_RS02090 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site SE87_RS02090 IPR006656 Molybdopterin oxidoreductase SE87_RS02090 IPR006657 Molydopterin dinucleotide-binding domain SE87_RS02090 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase SE87_RS02090 IPR009010 Aspartate decarboxylase-like domain SE87_RS02100 IPR001674 GMP synthase, C-terminal SE87_RS02100 IPR004739 GMP synthase, N-terminal SE87_RS02100 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SE87_RS02100 IPR017926 Glutamine amidotransferase SE87_RS02100 IPR022310 NAD/GMP synthase SE87_RS02100 IPR022955 GMP synthase SE87_RS02100 IPR029062 Class I glutamine amidotransferase-like SE87_RS02105 IPR007876 Neuraminyllactose-binding hemagglutinin SE87_RS02135 IPR010095 Transposase IS605, OrfB, C-terminal SE87_RS02140 IPR021027 Transposase, putative, helix-turn-helix domain SE87_RS02145 IPR002686 Transposase IS200-like SE87_RS02150 IPR006685 Mechanosensitive ion channel MscS SE87_RS02150 IPR006686 Mechanosensitive ion channel MscS, conserved site SE87_RS02150 IPR010920 Like-Sm (LSM) domain SE87_RS02150 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 SE87_RS02150 IPR011066 Mechanosensitive ion channel MscS, C-terminal SE87_RS02155 IPR003333 Mycolic acid cyclopropane synthase SE87_RS02155 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS02160 IPR002547 tRNA-binding domain SE87_RS02160 IPR004495 Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal SE87_RS02160 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding SE87_RS02160 IPR012340 Nucleic acid-binding, OB-fold SE87_RS02160 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SE87_RS02160 IPR014758 Methionyl-tRNA synthetase SE87_RS02160 IPR015413 Methionyl/Leucyl tRNA synthetase SE87_RS02160 IPR023457 Methionine-tRNA synthetase, type 2 SE87_RS02170 IPR010017 tRNA (mo5U34)-methyltransferase SE87_RS02170 IPR027555 tRNA (mo5U34)-methyltransferase-like SE87_RS02170 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS02175 IPR006683 Thioesterase superfamily SE87_RS02175 IPR029069 HotDog domain SE87_RS02180 IPR001296 Glycosyl transferase, family 1 SE87_RS02180 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain SE87_RS02185 IPR000183 Ornithine/DAP/Arg decarboxylase SE87_RS02185 IPR002985 Arginine decarboxylase SE87_RS02185 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal SE87_RS02185 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal SE87_RS02185 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal SE87_RS02185 IPR029066 PLP-binding barrel SE87_RS02205 IPR004919 Domain of unknown function DUF262 SE87_RS02205 IPR011089 Domain of unknown function DUF1524 SE87_RS02230 IPR002035 von Willebrand factor, type A SE87_RS02230 IPR011392 Tellurite resistance, TerY SE87_RS02240 IPR001932 Protein phosphatase 2C (PP2C)-like domain SE87_RS02245 IPR000719 Protein kinase domain SE87_RS02245 IPR011009 Protein kinase-like domain SE87_RS02260 IPR002686 Transposase IS200-like SE87_RS02265 IPR001959 Transposase, probable, IS891/IS1136/IS1341 SE87_RS02265 IPR010095 Transposase IS605, OrfB, C-terminal SE87_RS02265 IPR021027 Transposase, putative, helix-turn-helix domain SE87_RS02270 IPR007430 Bacterial virulence protein VirB8 SE87_RS02270 IPR032710 SE87_RS02270 SE87_RS02275 IPR000380 DNA topoisomerase, type IA SE87_RS02275 IPR003601 DNA topoisomerase, type IA, domain 2 SE87_RS02275 IPR003602 DNA topoisomerase, type IA, DNA-binding domain SE87_RS02275 IPR006171 Toprim domain SE87_RS02275 IPR013497 DNA topoisomerase, type IA, central SE87_RS02275 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SE87_RS02275 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 SE87_RS02275 IPR023405 DNA topoisomerase, type IA, core domain SE87_RS02280 IPR002789 Domain of unknown function DUF87 SE87_RS02280 IPR004346 CagE, TrbE, VirB component of type IV transporter system SE87_RS02280 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain SE87_RS02280 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS02280 IPR032689 SE87_RS02280 SE87_RS02310 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS02335 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS02340 IPR018633 Domain of unknown function DUF2357 SE87_RS02345 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS02365 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 SE87_RS02380 IPR002543 FtsK domain SE87_RS02380 IPR004346 CagE, TrbE, VirB component of type IV transporter system SE87_RS02380 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain SE87_RS02380 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS02395 IPR000055 Restriction endonuclease, type I, HsdS SE87_RS02405 IPR002052 DNA methylase, N-6 adenine-specific, conserved site SE87_RS02405 IPR003356 DNA methylase, adenine-specific SE87_RS02405 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS02410 IPR006935 Helicase/UvrB domain SE87_RS02410 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal SE87_RS02410 IPR014001 Helicase, superfamily 1/2, ATP-binding domain SE87_RS02410 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS02415 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like SE87_RS02420 IPR007791 Heat shock protein DnaJ-like protein DjlA SE87_RS02420 IPR029024 TerB-like SE87_RS02440 IPR001567 Peptidase M3A/M3B SE87_RS02440 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 SE87_RS02440 IPR013647 Oligopeptidase F, N-terminal domain SE87_RS02440 IPR024079 Metallopeptidase, catalytic domain SE87_RS02445 IPR006153 Cation/H+ exchanger SE87_RS02450 IPR002718 Outer membrane protein, Helicobacter SE87_RS02455 IPR005950 Molybdenum ABC transporter, periplasmic binding protein SE87_RS02460 IPR000515 MetI-like domain SE87_RS02460 IPR011867 Molybdate ABC transporter, permease protein SE87_RS02465 IPR003439 ABC transporter-like SE87_RS02465 IPR003593 AAA+ ATPase domain SE87_RS02465 IPR017871 ABC transporter, conserved site SE87_RS02465 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS02470 IPR000924 Glutamyl/glutaminyl-tRNA synthetase SE87_RS02470 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site SE87_RS02470 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial SE87_RS02470 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding SE87_RS02470 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SE87_RS02470 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain SE87_RS02470 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain SE87_RS02470 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 SE87_RS02475 IPR002718 Outer membrane protein, Helicobacter SE87_RS02480 IPR002052 DNA methylase, N-6 adenine-specific, conserved site SE87_RS02480 IPR003356 DNA methylase, adenine-specific SE87_RS02480 IPR025931 TaqI-like C-terminal specificity domain SE87_RS02480 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS02485 IPR002201 Glycosyl transferase, family 9 SE87_RS02490 IPR000640 Translation elongation factor EFG, V domain SE87_RS02490 IPR000795 Elongation factor, GTP-binding domain SE87_RS02490 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 SE87_RS02490 IPR005225 Small GTP-binding protein domain SE87_RS02490 IPR006298 GTP-binding protein TypA SE87_RS02490 IPR009000 Translation protein, beta-barrel domain SE87_RS02490 IPR009022 Elongation factor G, III-V domain SE87_RS02490 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS02490 IPR031157 SE87_RS02490 SE87_RS02520 IPR011614 Catalase core domain SE87_RS02520 IPR018028 Catalase, mono-functional, haem-containing SE87_RS02520 IPR020835 Catalase-like domain SE87_RS02520 IPR024168 Catalase, SrpA-type, predicted SE87_RS02525 IPR003678 Putative outer membrane protein SE87_RS02530 IPR003678 Putative outer membrane protein SE87_RS02535 IPR021907 Protein of unknown function DUF3519 SE87_RS02545 IPR003148 Regulator of K+ conductance, N-terminal SE87_RS02545 IPR006037 Regulator of K+ conductance, C-terminal SE87_RS02545 IPR016040 NAD(P)-binding domain SE87_RS02550 IPR001383 Ribosomal protein L28 SE87_RS02550 IPR026569 Ribosomal protein L28/L24 SE87_RS02555 IPR007876 Neuraminyllactose-binding hemagglutinin SE87_RS02560 IPR000715 Glycosyl transferase, family 4 SE87_RS02560 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase SE87_RS02560 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site SE87_RS02565 IPR004101 Mur ligase, C-terminal SE87_RS02565 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase SE87_RS02565 IPR013221 Mur ligase, central SE87_RS02565 IPR018109 Folylpolyglutamate synthetase, conserved site SE87_RS02570 IPR007454 Uncharacterised protein family UPF0250 SE87_RS02570 IPR027471 YbeD-like domain SE87_RS02575 IPR006683 Thioesterase superfamily SE87_RS02575 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family SE87_RS02575 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site SE87_RS02575 IPR029069 HotDog domain SE87_RS02580 IPR000175 Sodium:neurotransmitter symporter SE87_RS02585 IPR000175 Sodium:neurotransmitter symporter SE87_RS02590 IPR003187 Phospholipase A1 SE87_RS02595 IPR001001 DNA polymerase III, beta chain SE87_RS02595 IPR022634 DNA polymerase III, beta chain, N-terminal SE87_RS02595 IPR022635 DNA polymerase III, beta chain, C-terminal SE87_RS02595 IPR022637 DNA polymerase III, beta chain, central SE87_RS02600 IPR000565 DNA topoisomerase, type IIA, subunit B SE87_RS02600 IPR001241 DNA topoisomerase, type IIA SE87_RS02600 IPR002288 DNA gyrase B subunit, C-terminal SE87_RS02600 IPR003594 Histidine kinase-like ATPase, C-terminal domain SE87_RS02600 IPR006171 Toprim domain SE87_RS02600 IPR011557 DNA gyrase, subunit B SE87_RS02600 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 SE87_RS02600 IPR013759 DNA topoisomerase, type IIA, central domain SE87_RS02600 IPR013760 DNA topoisomerase, type IIA-like domain SE87_RS02600 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SE87_RS02600 IPR018522 DNA topoisomerase, type IIA, conserved site SE87_RS02600 IPR020568 Ribosomal protein S5 domain 2-type fold SE87_RS02615 IPR011055 Duplicated hybrid motif SE87_RS02615 IPR016047 Peptidase M23 SE87_RS02620 IPR004385 Nucleoside diphosphate pyrophosphatase SE87_RS02620 IPR015797 NUDIX hydrolase domain-like SE87_RS02625 IPR029276 Plasminogen-binding protein PgbA, N-terminal SE87_RS02625 IPR032737 SE87_RS02625 SE87_RS02630 IPR004113 FAD-linked oxidase, C-terminal SE87_RS02630 IPR004490 Glycolate oxidase subunit GlcD SE87_RS02630 IPR006094 FAD linked oxidase, N-terminal SE87_RS02630 IPR016164 FAD-linked oxidase-like, C-terminal SE87_RS02630 IPR016166 FAD-binding, type 2 SE87_RS02630 IPR016167 FAD-binding, type 2, subdomain 1 SE87_RS02630 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 SE87_RS02630 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 SE87_RS02635 IPR000846 Dihydrodipicolinate reductase, N-terminal SE87_RS02635 IPR016040 NAD(P)-binding domain SE87_RS02635 IPR022663 Dihydrodipicolinate reductase, C-terminal SE87_RS02635 IPR022664 Dihydrodipicolinate reductase, conserved site SE87_RS02635 IPR023940 Dihydrodipicolinate reductase, bacterial SE87_RS02645 IPR004809 Glutamine synthetase type I SE87_RS02645 IPR008146 Glutamine synthetase, catalytic domain SE87_RS02645 IPR008147 Glutamine synthetase, beta-Grasp SE87_RS02645 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain SE87_RS02645 IPR027303 Glutamine synthetase, glycine-rich site SE87_RS02650 IPR004919 Domain of unknown function DUF262 SE87_RS02650 IPR011089 Domain of unknown function DUF1524 SE87_RS02655 IPR000244 Ribosomal protein L9 SE87_RS02655 IPR009027 Ribosomal protein L9/RNase H1, N-terminal SE87_RS02655 IPR020069 Ribosomal protein L9, C-terminal SE87_RS02655 IPR020070 Ribosomal protein L9, N-terminal SE87_RS02655 IPR020594 Ribosomal protein L9, bacteria/chloroplast SE87_RS02660 IPR001353 Proteasome, subunit alpha/beta SE87_RS02660 IPR022281 ATP-dependent protease, HslV subunit SE87_RS02660 IPR029055 Nucleophile aminohydrolases, N-terminal SE87_RS02665 IPR003593 AAA+ ATPase domain SE87_RS02665 IPR003959 ATPase, AAA-type, core SE87_RS02665 IPR004491 Heat shock protein HslU SE87_RS02665 IPR019489 Clp ATPase, C-terminal SE87_RS02665 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS02670 IPR004044 K Homology domain, type 2 SE87_RS02670 IPR005225 Small GTP-binding protein domain SE87_RS02670 IPR005662 GTP-binding protein Era SE87_RS02670 IPR006073 GTP binding domain SE87_RS02670 IPR009019 K homology domain, prokaryotic type SE87_RS02670 IPR015946 K homology domain-like, alpha/beta SE87_RS02670 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS02675 IPR005490 L,D-transpeptidase catalytic domain SE87_RS02675 IPR032710 SE87_RS02675 SE87_RS02680 IPR006597 Sel1-like SE87_RS02680 IPR011990 Tetratricopeptide-like helical domain SE87_RS02705 IPR008258 Lytic transglycosylase-like SLT domain SE87_RS02710 IPR003688 Ti-type conjugative transfer system, TraG-like SE87_RS02710 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS02715 IPR001482 Type II secretion system protein E SE87_RS02715 IPR014155 Type IV secretion system protein VirB11 SE87_RS02715 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS02720 IPR015139 Cag pathogenicity island protein, CagZ SE87_RS02725 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI SE87_RS02725 IPR010853 DC-EC SE87_RS02725 IPR029285 CagY type 1 repeat SE87_RS02730 IPR004357 Type IV secretion system CagX conjugation protein SE87_RS02730 IPR010258 Conjugal transfer, TrbG/VirB9/CagX SE87_RS02740 IPR007430 Bacterial virulence protein VirB8 SE87_RS02740 IPR032710 SE87_RS02740 SE87_RS02750 IPR025264 Cag pathogenicity island protein Cag12 SE87_RS02755 IPR032020 SE87_RS02755 SE87_RS02815 IPR004346 CagE, TrbE, VirB component of type IV transporter system SE87_RS02815 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain SE87_RS02815 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS02820 IPR032336 SE87_RS02820 SE87_RS02825 IPR031607 SE87_RS02825 SE87_RS02835 IPR004355 Type IV secretion system CagA exotoxin SE87_RS02835 IPR005169 CagA exotoxin SE87_RS02840 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS02845 IPR026851 Dna2 SE87_RS02845 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS02850 IPR001920 Asp/Glu racemase SE87_RS02850 IPR004391 Glutamate racemase SE87_RS02850 IPR015942 Asp/Glu/hydantoin racemase SE87_RS02850 IPR018187 Asp/Glu racemase, active site SE87_RS02850 IPR033134 SE87_RS02850 SE87_RS02855 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain SE87_RS02855 IPR003593 AAA+ ATPase domain SE87_RS02855 IPR004665 Transcription termination factor Rho SE87_RS02855 IPR011112 Rho termination factor, N-terminal SE87_RS02855 IPR011113 Rho termination factor, RNA-binding SE87_RS02855 IPR011129 Cold shock protein SE87_RS02855 IPR012340 Nucleic acid-binding, OB-fold SE87_RS02855 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS02860 IPR002150 Ribosomal protein L31 SE87_RS02860 IPR027491 Ribosomal protein L31 type A SE87_RS02865 IPR000878 Tetrapyrrole methylase SE87_RS02865 IPR008189 rRNA small subunit methyltransferase I SE87_RS02865 IPR014776 Tetrapyrrole methylase, subdomain 2 SE87_RS02865 IPR014777 Tetrapyrrole methylase, subdomain 1 SE87_RS02865 IPR018063 SAM-dependent methyltransferase RsmI, conserved site SE87_RS02870 IPR001537 tRNA/rRNA methyltransferase, SpoU type SE87_RS02870 IPR004441 RNA methyltransferase TrmH family SE87_RS02870 IPR013123 RNA 2-O ribose methyltransferase, substrate binding SE87_RS02870 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SE87_RS02870 IPR029028 Alpha/beta knot methyltransferases SE87_RS02870 IPR029064 50S ribosomal protein L30e-like SE87_RS02890 IPR001095 Acetyl-CoA carboxylase, alpha subunit SE87_RS02890 IPR029045 ClpP/crotonase-like domain SE87_RS02895 IPR014030 Beta-ketoacyl synthase, N-terminal SE87_RS02895 IPR014031 Beta-ketoacyl synthase, C-terminal SE87_RS02895 IPR016039 Thiolase-like SE87_RS02895 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 SE87_RS02895 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain SE87_RS02900 IPR003231 Acyl carrier protein (ACP) SE87_RS02900 IPR006162 Phosphopantetheine attachment site SE87_RS02900 IPR009081 Acyl carrier protein-like SE87_RS02900 IPR020806 Polyketide synthase, phosphopantetheine-binding domain SE87_RS02905 IPR002347 Glucose/ribitol dehydrogenase SE87_RS02905 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase SE87_RS02905 IPR016040 NAD(P)-binding domain SE87_RS02905 IPR020904 Short-chain dehydrogenase/reductase, conserved site SE87_RS02910 IPR001911 Ribosomal protein S21 SE87_RS02910 IPR018278 Ribosomal protein S21, conserved site SE87_RS02920 IPR010985 Ribbon-helix-helix SE87_RS02920 IPR031895 SE87_RS02920 SE87_RS02925 IPR007339 Protein of unknown function DUF417 SE87_RS02930 IPR001653 Diaminopimelate epimerase, DapF SE87_RS02930 IPR018510 Diaminopimelate epimerase, active site SE87_RS02935 IPR002549 Uncharacterised protein family UPF0118 SE87_RS02940 IPR013785 Aldolase-type TIM barrel SE87_RS02940 IPR023885 4Fe4S-binding SPASM domain SE87_RS02945 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 SE87_RS02945 IPR006073 GTP binding domain SE87_RS02945 IPR012675 Beta-grasp domain SE87_RS02945 IPR012676 TGS-like SE87_RS02945 IPR013029 Domain of unknown function DUF933 SE87_RS02945 IPR023192 TGS-like domain SE87_RS02945 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS02950 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal SE87_RS02950 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal SE87_RS02950 IPR011356 Leucine aminopeptidase/peptidase B SE87_RS02950 IPR023042 Peptidase M17, leucine aminopeptidase SE87_RS02955 IPR032816 SE87_RS02955 SE87_RS02955 IPR032818 SE87_RS02955 SE87_RS02960 IPR000836 Phosphoribosyltransferase domain SE87_RS02960 IPR005764 Adenine phosphoribosyl transferase SE87_RS02960 IPR029057 Phosphoribosyltransferase-like SE87_RS02970 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family SE87_RS02970 IPR004785 Ribose 5-phosphate isomerase B SE87_RS02980 IPR000223 Peptidase S26A, signal peptidase I SE87_RS02980 IPR015927 Peptidase S24/S26A/S26B/S26C SE87_RS02980 IPR019758 Peptidase S26A, signal peptidase I, conserved site SE87_RS02980 IPR019759 Peptidase S24/S26A/S26B SE87_RS02980 IPR028360 Peptidase S24/S26, beta-ribbon domain SE87_RS02985 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase SE87_RS02985 IPR016040 NAD(P)-binding domain SE87_RS02985 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SE87_RS02985 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SE87_RS02985 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site SE87_RS02990 IPR000917 Sulfatase SE87_RS02990 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha SE87_RS02990 IPR017850 Alkaline-phosphatase-like, core domain SE87_RS03000 IPR011040 Sialidases SE87_RS03005 IPR002195 Dihydroorotase, conserved site SE87_RS03005 IPR004721 Dihydroorotase homodimeric type SE87_RS03005 IPR032466 SE87_RS03005 SE87_RS03010 IPR006260 TonB, C-terminal SE87_RS03020 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb SE87_RS03020 IPR001543 Surface presentation of antigen (SpoA) SE87_RS03020 IPR012826 Flagellar motor switch FliN SE87_RS03025 IPR000445 Helix-hairpin-helix motif SE87_RS03025 IPR003265 HhH-GPD domain SE87_RS03025 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif SE87_RS03025 IPR004035 Endonuclease III, iron-sulphur binding site SE87_RS03025 IPR005759 Endonuclease III SE87_RS03025 IPR011257 DNA glycosylase SE87_RS03025 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal SE87_RS03030 IPR007167 Ferrous iron transporter FeoA domain SE87_RS03030 IPR008988 Transcriptional repressor, C-terminal SE87_RS03035 IPR025263 Domain of unknown function DUF3971 SE87_RS03040 IPR003770 Uncharacterised protein family UPF0755, YceG-like SE87_RS03040 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain SE87_RS03045 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SE87_RS03045 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SE87_RS03050 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal SE87_RS03050 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II SE87_RS03050 IPR029061 Thiamin diphosphate-binding fold SE87_RS03050 IPR033412 SE87_RS03050 SE87_RS03055 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding SE87_RS03055 IPR029061 Thiamin diphosphate-binding fold SE87_RS03060 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain SE87_RS03060 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain SE87_RS03065 IPR006935 Helicase/UvrB domain SE87_RS03065 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS03070 IPR002052 DNA methylase, N-6 adenine-specific, conserved site SE87_RS03070 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class SE87_RS03070 IPR002941 DNA methylase N-4/N-6 SE87_RS03070 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS03080 IPR003752 Disulphide bond formation protein DsbB/BdbC SE87_RS03080 IPR023380 Disulphide bond formation protein DsbB-like domain SE87_RS03085 IPR031923 SE87_RS03085 SE87_RS03090 IPR001264 Glycosyl transferase, family 51 SE87_RS03090 IPR001460 Penicillin-binding protein, transpeptidase SE87_RS03090 IPR012338 Beta-lactamase/transpeptidase-like SE87_RS03090 IPR023346 Lysozyme-like domain SE87_RS03095 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site SE87_RS03095 IPR004839 Aminotransferase, class I/classII SE87_RS03095 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 SE87_RS03095 IPR015424 Pyridoxal phosphate-dependent transferase SE87_RS03100 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain SE87_RS03100 IPR025991 Chemoreceptor zinc-binding domain SE87_RS03105 IPR003439 ABC transporter-like SE87_RS03105 IPR003593 AAA+ ATPase domain SE87_RS03105 IPR011527 ABC transporter type 1, transmembrane domain SE87_RS03105 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS03110 IPR001029 Flagellin, D0/D1 domain SE87_RS03110 IPR001492 Flagellin SE87_RS03110 IPR010810 Flagellin hook, IN motif SE87_RS03115 IPR000445 Helix-hairpin-helix motif SE87_RS03115 IPR003265 HhH-GPD domain SE87_RS03115 IPR011257 DNA glycosylase SE87_RS03115 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal SE87_RS03125 IPR000257 Uroporphyrinogen decarboxylase (URO-D) SE87_RS03125 IPR006361 Uroporphyrinogen decarboxylase HemE SE87_RS03130 IPR003423 Outer membrane efflux protein SE87_RS03135 IPR006143 RND efflux pump, membrane fusion protein SE87_RS03135 IPR032317 SE87_RS03135 SE87_RS03140 IPR001036 Acriflavin resistance protein SE87_RS03140 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SE87_RS03145 IPR002718 Outer membrane protein, Helicobacter SE87_RS03145 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel SE87_RS03150 IPR004311 Vacuolating cytotoxin, putative SE87_RS03150 IPR005546 Autotransporter beta-domain SE87_RS03150 IPR006626 Parallel beta-helix repeat SE87_RS03165 IPR003439 ABC transporter-like SE87_RS03165 IPR003593 AAA+ ATPase domain SE87_RS03165 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS03175 IPR001357 BRCT domain SE87_RS03175 IPR001679 NAD-dependent DNA ligase SE87_RS03175 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 SE87_RS03175 IPR004150 NAD-dependent DNA ligase, OB-fold SE87_RS03175 IPR010994 RuvA domain 2-like SE87_RS03175 IPR012340 Nucleic acid-binding, OB-fold SE87_RS03175 IPR013839 NAD-dependent DNA ligase, adenylation SE87_RS03175 IPR013840 NAD-dependent DNA ligase, N-terminal SE87_RS03175 IPR018239 NAD-dependent DNA ligase, active site SE87_RS03175 IPR033136 SE87_RS03175 SE87_RS03180 IPR001789 Signal transduction response regulator, receiver domain SE87_RS03180 IPR002545 CheW-like protein SE87_RS03180 IPR011006 CheY-like superfamily SE87_RS03180 IPR024181 Chemotaxis response regulator CheV SE87_RS03185 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb SE87_RS03185 IPR004115 GAD-like domain SE87_RS03185 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) SE87_RS03185 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type SE87_RS03185 IPR004524 Aspartate-tRNA ligase, class IIb, bacterial/mitochondrial-type SE87_RS03185 IPR012340 Nucleic acid-binding, OB-fold SE87_RS03185 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like SE87_RS03185 IPR029351 GAD domain SE87_RS03190 IPR000850 Adenylate kinase/UMP-CMP kinase SE87_RS03190 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS03195 IPR002654 Glycosyl transferase, family 25 SE87_RS03200 IPR002654 Glycosyl transferase, family 25 SE87_RS03205 IPR008162 Inorganic pyrophosphatase SE87_RS03210 IPR000432 DNA mismatch repair protein MutS, C-terminal SE87_RS03210 IPR002625 Smr protein/MutS2 C-terminal SE87_RS03210 IPR005747 Endonuclease MutS2 SE87_RS03210 IPR007696 DNA mismatch repair protein MutS, core SE87_RS03210 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS03220 IPR000713 Mur ligase, N-terminal SE87_RS03220 IPR004101 Mur ligase, C-terminal SE87_RS03220 IPR005758 UDP-N-acetylmuramate-alanine ligase SE87_RS03220 IPR013221 Mur ligase, central SE87_RS03220 IPR016040 NAD(P)-binding domain SE87_RS03225 IPR004839 Aminotransferase, class I/classII SE87_RS03225 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 SE87_RS03225 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 SE87_RS03225 IPR015424 Pyridoxal phosphate-dependent transferase SE87_RS03230 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type SE87_RS03230 IPR013785 Aldolase-type TIM barrel SE87_RS03230 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial SE87_RS03230 IPR029065 Enolase C-terminal domain-like SE87_RS03235 IPR001451 Bacterial transferase hexapeptide repeat SE87_RS03235 IPR011004 Trimeric LpxA-like SE87_RS03235 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family SE87_RS03235 IPR032784 SE87_RS03235 SE87_RS03240 IPR006597 Sel1-like SE87_RS03240 IPR011990 Tetratricopeptide-like helical domain SE87_RS03245 IPR004919 Domain of unknown function DUF262 SE87_RS03245 IPR011089 Domain of unknown function DUF1524 SE87_RS03250 IPR003680 Flavodoxin-like fold SE87_RS03250 IPR029039 Flavoprotein-like SE87_RS03255 IPR001821 [NiFe]-hydrogenase, small subunit SE87_RS03255 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit SE87_RS03255 IPR027394 Cytochrome-c3 hydrogenase, C-terminal SE87_RS03260 IPR001501 Nickel-dependent hydrogenase, large subunit SE87_RS03260 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site SE87_RS03260 IPR029014 NiFe hydrogenase-like SE87_RS03265 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit SE87_RS03265 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase SE87_RS03265 IPR016174 Di-haem cytochrome, transmembrane SE87_RS03270 IPR000671 Peptidase A31 family SE87_RS03270 IPR004419 Peptidase A31, hydrogenase expression/formation protein SE87_RS03270 IPR023430 Peptidase HybD-like domain SE87_RS03290 IPR002718 Outer membrane protein, Helicobacter SE87_RS03295 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SE87_RS03295 IPR018317 Queuosine biosynthesis protein QueC SE87_RS03300 IPR002646 Poly A polymerase, head domain SE87_RS03300 IPR032828 SE87_RS03300 SE87_RS03305 IPR013328 Dehydrogenase, multihelical SE87_RS03310 IPR000415 Nitroreductase-like SE87_RS03310 IPR029479 Nitroreductase SE87_RS03315 IPR000924 Glutamyl/glutaminyl-tRNA synthetase SE87_RS03315 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site SE87_RS03315 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial SE87_RS03315 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding SE87_RS03315 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SE87_RS03315 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain SE87_RS03315 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain SE87_RS03315 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 SE87_RS03320 IPR003425 Uncharacterised protein family Ycf19 SE87_RS03325 IPR008258 Lytic transglycosylase-like SLT domain SE87_RS03325 IPR023346 Lysozyme-like domain SE87_RS03330 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type SE87_RS03330 IPR005835 Nucleotidyl transferase SE87_RS03330 IPR029044 Nucleotide-diphospho-sugar transferases SE87_RS03340 IPR001986 Enolpyruvate transferase domain SE87_RS03340 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase SE87_RS03340 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta SE87_RS03345 IPR000362 Fumarate lyase family SE87_RS03345 IPR004708 Aspartate ammonia-lyase SE87_RS03345 IPR008948 L-Aspartase-like SE87_RS03345 IPR018951 Fumarase C, C-terminal SE87_RS03345 IPR020557 Fumarate lyase, conserved site SE87_RS03345 IPR022761 Fumarate lyase, N-terminal SE87_RS03345 IPR024083 Fumarase/histidase, N-terminal SE87_RS03350 IPR005122 Uracil-DNA glycosylase-like SE87_RS03355 IPR001503 Glycosyl transferase, family 10 SE87_RS03355 IPR016646 Alpha-(1, 3)-fucosyltransferase/alpha-(1, 4)-fucosyltransferase, helicobacter SE87_RS03360 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like SE87_RS03360 IPR023190 Phosphoserine phosphatase, domain 2 SE87_RS03360 IPR023214 HAD-like domain SE87_RS03365 IPR001519 Ferritin SE87_RS03365 IPR008331 Ferritin/DPS protein domain SE87_RS03365 IPR009078 Ferritin-like superfamily SE87_RS03365 IPR012347 Ferritin-related SE87_RS03370 IPR005244 FO synthase, subunit 2-like SE87_RS03370 IPR007197 Radical SAM SE87_RS03370 IPR013785 Aldolase-type TIM barrel SE87_RS03370 IPR020050 FO synthase, subunit 2 SE87_RS03370 IPR022432 Menaquinone biosynthesis, SCO4494, predicted SE87_RS03375 IPR000184 Bacterial surface antigen (D15) SE87_RS03375 IPR010827 Surface antigen variable number SE87_RS03375 IPR023707 Outer membrane protein assembly factor BamA SE87_RS03380 IPR005244 FO synthase, subunit 2-like SE87_RS03380 IPR006638 Elongator protein 3/MiaB/NifB SE87_RS03380 IPR007197 Radical SAM SE87_RS03380 IPR013785 Aldolase-type TIM barrel SE87_RS03380 IPR020050 FO synthase, subunit 2 SE87_RS03380 IPR022431 Menaquinone biosynthesis, SCO4550 SE87_RS03385 IPR007863 Peptidase M16, C-terminal domain SE87_RS03385 IPR011237 Peptidase M16 domain SE87_RS03385 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like SE87_RS03385 IPR011765 Peptidase M16, N-terminal SE87_RS03390 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related SE87_RS03390 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit SE87_RS03390 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic SE87_RS03390 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site SE87_RS03390 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E SE87_RS03390 IPR018027 Asn/Gln amidotransferase SE87_RS03395 IPR015391 SurA N-terminal SE87_RS03395 IPR027304 Trigger factor/SurA domain SE87_RS03400 IPR011990 Tetratricopeptide-like helical domain SE87_RS03405 IPR002156 Ribonuclease H domain SE87_RS03405 IPR012337 Ribonuclease H-like domain SE87_RS03405 IPR022892 Ribonuclease H SE87_RS03410 IPR000999 Ribonuclease III domain SE87_RS03410 IPR011907 Ribonuclease III SE87_RS03410 IPR014720 Double-stranded RNA-binding domain SE87_RS03415 IPR000453 Chorismate synthase SE87_RS03415 IPR020541 Chorismate synthase, conserved site SE87_RS03420 IPR019724 Uncharacterised protein family UPF0763 SE87_RS03425 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN SE87_RS03425 IPR006638 Elongator protein 3/MiaB/NifB SE87_RS03425 IPR007197 Radical SAM SE87_RS03425 IPR010723 HemN, C-terminal domain SE87_RS03425 IPR023404 Radical SAM, alpha/beta horseshoe SE87_RS03430 IPR004017 Cysteine-rich domain SE87_RS03430 IPR009051 Alpha-helical ferredoxin SE87_RS03430 IPR012257 Glycolate oxidase, iron-sulphur subunit SE87_RS03430 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SE87_RS03440 IPR002052 DNA methylase, N-6 adenine-specific, conserved site SE87_RS03440 IPR003356 DNA methylase, adenine-specific SE87_RS03440 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS03450 IPR002718 Outer membrane protein, Helicobacter SE87_RS03455 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site SE87_RS03455 IPR004839 Aminotransferase, class I/classII SE87_RS03455 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 SE87_RS03455 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 SE87_RS03455 IPR015424 Pyridoxal phosphate-dependent transferase SE87_RS03465 IPR002104 Integrase, catalytic SE87_RS03465 IPR011010 DNA breaking-rejoining enzyme, catalytic core SE87_RS03465 IPR013762 Integrase-like, catalytic core SE87_RS03470 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site SE87_RS03470 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain SE87_RS03470 IPR011991 Winged helix-turn-helix DNA-binding domain SE87_RS03470 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding SE87_RS03475 IPR002781 Transmembrane protein TauE like SE87_RS03480 IPR000683 Oxidoreductase, N-terminal SE87_RS03480 IPR004104 Oxidoreductase, C-terminal SE87_RS03480 IPR016040 NAD(P)-binding domain SE87_RS03485 IPR000788 Ribonucleotide reductase large subunit, C-terminal SE87_RS03485 IPR005144 ATP-cone SE87_RS03485 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal SE87_RS03485 IPR013346 Ribonucleotide reductase, class I , alpha subunit SE87_RS03485 IPR013509 Ribonucleotide reductase large subunit, N-terminal SE87_RS03500 IPR001451 Bacterial transferase hexapeptide repeat SE87_RS03500 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase SE87_RS03500 IPR011004 Trimeric LpxA-like SE87_RS03500 IPR018357 Hexapeptide transferase, conserved site SE87_RS03500 IPR025877 MobA-like NTP transferase domain SE87_RS03500 IPR029044 Nucleotide-diphospho-sugar transferases SE87_RS03505 IPR005837 Flagellar transport protein FliP SE87_RS03505 IPR005838 Type III secretion system inner membrane P protein SE87_RS03510 IPR005837 Flagellar transport protein FliP SE87_RS03510 IPR005838 Type III secretion system inner membrane P protein SE87_RS03515 IPR000531 TonB-dependent receptor, beta-barrel SE87_RS03515 IPR012910 TonB-dependent receptor, plug SE87_RS03520 IPR003373 Ferrous iron transport protein B SE87_RS03520 IPR011619 Ferrous iron transport protein B, N-terminal SE87_RS03520 IPR011640 Ferrous iron transport protein B, C-terminal SE87_RS03520 IPR011642 Nucleoside recognition Gate SE87_RS03520 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS03525 IPR012337 Ribonuclease H-like domain SE87_RS03525 IPR019288 Predicted 3'-5' exonuclease, PolB-like SE87_RS03530 IPR002155 Thiolase SE87_RS03530 IPR016039 Thiolase-like SE87_RS03530 IPR020613 Thiolase, conserved site SE87_RS03530 IPR020615 Thiolase, acyl-enzyme intermediate active site SE87_RS03530 IPR020616 Thiolase, N-terminal SE87_RS03530 IPR020617 Thiolase, C-terminal SE87_RS03535 IPR004163 Coenzyme A transferase binding site SE87_RS03535 IPR004165 Coenzyme A transferase family I SE87_RS03535 IPR012792 3-oxoacid CoA-transferase, subunit A SE87_RS03540 IPR004164 Coenzyme A transferase active site SE87_RS03540 IPR004165 Coenzyme A transferase family I SE87_RS03540 IPR012791 3-oxoacid CoA-transferase, subunit B SE87_RS03545 IPR006160 Short chain fatty acid transporter AtoE SE87_RS03545 IPR006161 Conserved hypothetical protein CHP00336 SE87_RS03550 IPR018707 Protein of unknown function DUF2219 SE87_RS03555 IPR002821 Hydantoinase/oxoprolinase SE87_RS03555 IPR008040 Hydantoinaseoxoprolinase, N-terminal SE87_RS03565 IPR016750 Acetophenone carboxylase beta subunit/Acetone carboxylase gamma subunit SE87_RS03580 IPR000829 Diacylglycerol kinase, prokaryotic SE87_RS03585 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal SE87_RS03585 IPR005743 DNA gyrase, subunit A SE87_RS03585 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel SE87_RS03585 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta SE87_RS03585 IPR013760 DNA topoisomerase, type IIA-like domain SE87_RS03585 IPR024946 Arginine repressor C-terminal-like domain SE87_RS03595 IPR001789 Signal transduction response regulator, receiver domain SE87_RS03595 IPR002078 RNA polymerase sigma factor 54 interaction domain SE87_RS03595 IPR003593 AAA+ ATPase domain SE87_RS03595 IPR011006 CheY-like superfamily SE87_RS03595 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SE87_RS03595 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SE87_RS03595 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS03600 IPR003439 ABC transporter-like SE87_RS03600 IPR004602 UvrABC system subunit A SE87_RS03600 IPR013815 ATP-grasp fold, subdomain 1 SE87_RS03600 IPR017871 ABC transporter, conserved site SE87_RS03600 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS03605 IPR002718 Outer membrane protein, Helicobacter SE87_RS03610 IPR002903 Ribosomal RNA small subunit methyltransferase H SE87_RS03610 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain SE87_RS03610 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS03620 IPR002747 S-adenosyl-l-methionine hydroxide adenosyltransferase SE87_RS03620 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal SE87_RS03620 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal SE87_RS03625 IPR002718 Outer membrane protein, Helicobacter SE87_RS03630 IPR006674 HD domain SE87_RS03635 IPR003812 Fido domain SE87_RS03640 IPR003812 Fido domain SE87_RS03645 IPR000394 RNA polymerase sigma factor 54 SE87_RS03645 IPR007046 RNA polymerase sigma factor 54, core-binding SE87_RS03645 IPR007634 RNA polymerase sigma factor 54, DNA-binding SE87_RS03650 IPR003439 ABC transporter-like SE87_RS03650 IPR003593 AAA+ ATPase domain SE87_RS03650 IPR017871 ABC transporter, conserved site SE87_RS03650 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS03650 IPR030921 SE87_RS03650 SE87_RS03655 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE SE87_RS03655 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS03660 IPR003593 AAA+ ATPase domain SE87_RS03660 IPR012763 DNA polymerase III, subunit gamma/ tau SE87_RS03660 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS03665 IPR001123 Lysine-type exporter protein (LYSE/YGGA) SE87_RS03670 IPR009488 Protein of unknown function DUF1104 SE87_RS03675 IPR009488 Protein of unknown function DUF1104 SE87_RS03680 IPR002718 Outer membrane protein, Helicobacter SE87_RS03685 IPR004550 L-asparaginase, type II SE87_RS03685 IPR006034 Asparaginase/glutaminase SE87_RS03685 IPR020827 Asparaginase/glutaminase, active site 1 SE87_RS03685 IPR027473 L-asparaginase, C-terminal domain SE87_RS03685 IPR027474 L-asparaginase, N-terminal SE87_RS03685 IPR027475 Asparaginase/glutaminase, active site 2 SE87_RS03690 IPR004668 Anaerobic c4-dicarboxylate membrane transporter SE87_RS03695 IPR002718 Outer membrane protein, Helicobacter SE87_RS03700 IPR002718 Outer membrane protein, Helicobacter SE87_RS03705 IPR001269 tRNA-dihydrouridine synthase SE87_RS03705 IPR013785 Aldolase-type TIM barrel SE87_RS03705 IPR018517 tRNA-dihydrouridine synthase, conserved site SE87_RS03705 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal SE87_RS03710 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase SE87_RS03710 IPR012094 Lysidine-tRNA(Ile) synthetase SE87_RS03710 IPR012795 Lysidine-tRNA(Ile) synthetase, N-terminal SE87_RS03710 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SE87_RS03725 IPR006073 GTP binding domain SE87_RS03725 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS03730 IPR006073 GTP binding domain SE87_RS03730 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS03735 IPR005839 Methylthiotransferase SE87_RS03735 IPR005840 Ribosomal protein S12 methylthiotransferase RimO SE87_RS03735 IPR006638 Elongator protein 3/MiaB/NifB SE87_RS03735 IPR007197 Radical SAM SE87_RS03735 IPR012340 Nucleic acid-binding, OB-fold SE87_RS03735 IPR013848 Methylthiotransferase, N-terminal SE87_RS03735 IPR020612 Methylthiotransferase, conserved site SE87_RS03735 IPR023404 Radical SAM, alpha/beta horseshoe SE87_RS03735 IPR023970 Methylthiotransferase/radical SAM-type protein SE87_RS03740 IPR000836 Phosphoribosyltransferase domain SE87_RS03740 IPR029057 Phosphoribosyltransferase-like SE87_RS03745 IPR000192 Aminotransferase class V domain SE87_RS03745 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 SE87_RS03745 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 SE87_RS03745 IPR015424 Pyridoxal phosphate-dependent transferase SE87_RS03745 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase SE87_RS03750 IPR007686 YutG/PgpA domain SE87_RS03750 IPR026037 Phosphatidylglycerophosphatase A SE87_RS03750 IPR027416 YutG-like domain SE87_RS03755 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site SE87_RS03755 IPR005905 D-alanine--D-alanine ligase SE87_RS03755 IPR011095 D-alanine--D-alanine ligase, C-terminal SE87_RS03755 IPR011127 D-alanine--D-alanine ligase, N-terminal domain SE87_RS03755 IPR013815 ATP-grasp fold, subdomain 1 SE87_RS03755 IPR013816 ATP-grasp fold, subdomain 2 SE87_RS03755 IPR016185 Pre-ATP-grasp domain SE87_RS03760 IPR000073 Alpha/beta hydrolase fold-1 SE87_RS03760 IPR029058 Alpha/Beta hydrolase fold SE87_RS03765 IPR004101 Mur ligase, C-terminal SE87_RS03765 IPR005863 UDP-MurNAc-pentapeptide synthetase SE87_RS03765 IPR013221 Mur ligase, central SE87_RS03770 IPR001310 Histidine triad (HIT) protein SE87_RS03770 IPR011146 HIT-like domain SE87_RS03775 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site SE87_RS03775 IPR005946 Ribose-phosphate diphosphokinase SE87_RS03775 IPR029057 Phosphoribosyltransferase-like SE87_RS03775 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain SE87_RS03785 IPR021147 Protein of unknown function DUF697 SE87_RS03790 IPR006073 GTP binding domain SE87_RS03790 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS03795 IPR002942 RNA-binding S4 domain SE87_RS03795 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F SE87_RS03795 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site SE87_RS03795 IPR006225 Pseudouridine synthase, RluC/RluD SE87_RS03795 IPR020103 Pseudouridine synthase, catalytic domain SE87_RS03800 IPR003961 Fibronectin, type III SE87_RS03800 IPR013783 Immunoglobulin-like fold SE87_RS03805 IPR003358 tRNA (guanine-N-7) methyltransferase SE87_RS03805 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS03810 IPR003439 ABC transporter-like SE87_RS03810 IPR003593 AAA+ ATPase domain SE87_RS03810 IPR017871 ABC transporter, conserved site SE87_RS03810 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS03820 IPR011055 Duplicated hybrid motif SE87_RS03820 IPR016047 Peptidase M23 SE87_RS03825 IPR005186 Flagellar protein FlaG protein SE87_RS03830 IPR003481 Flagellar hook-associated protein 2, N-terminal SE87_RS03830 IPR010809 Flagellar hook-associated 2, C-terminal SE87_RS03835 IPR003713 Flagellar protein FliS SE87_RS03845 IPR000594 UBA/THIF-type NAD/FAD binding fold SE87_RS03845 IPR016040 NAD(P)-binding domain SE87_RS03855 IPR003010 Carbon-nitrogen hydrolase SE87_RS03860 IPR018461 Na+/H+ antiporter, NhaC-like SE87_RS03860 IPR032813 SE87_RS03860 SE87_RS03865 IPR002528 Multi antimicrobial extrusion protein SE87_RS03870 IPR003607 HD/PDEase domain SE87_RS03870 IPR004087 K Homology domain SE87_RS03870 IPR004088 K Homology domain, type 1 SE87_RS03870 IPR006674 HD domain SE87_RS03870 IPR006675 Uncharacterised domain HDIG SE87_RS03870 IPR017705 Ribonuclease Y SE87_RS03875 IPR002698 5-formyltetrahydrofolate cyclo-ligase SE87_RS03875 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain SE87_RS03880 IPR012336 Thioredoxin-like fold SE87_RS03885 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain SE87_RS03885 IPR004390 Signal-recognition particle receptor FtsY SE87_RS03885 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS03890 IPR005358 Putative zinc- or iron-chelating domain containing protein SE87_RS03915 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site SE87_RS03915 IPR006638 Elongator protein 3/MiaB/NifB SE87_RS03915 IPR007197 Radical SAM SE87_RS03915 IPR010505 Molybdenum cofactor synthesis C-terminal SE87_RS03915 IPR013483 Molybdenum cofactor biosynthesis protein A SE87_RS03915 IPR013785 Aldolase-type TIM barrel SE87_RS03920 IPR013482 Molybdenum cofactor guanylyltransferase SE87_RS03920 IPR025877 MobA-like NTP transferase domain SE87_RS03920 IPR029044 Nucleotide-diphospho-sugar transferases SE87_RS03925 IPR006135 Type III secretion system substrate exporter SE87_RS03925 IPR006136 Type III exporter system, flagellar biosynthetic protein FlhB SE87_RS03925 IPR029025 Type III secretion system substrate exporter, C-terminal SE87_RS03935 IPR002508 Cell wall hydrolase/autolysin, catalytic SE87_RS03940 IPR004136 2-nitropropane dioxygenase, NPD SE87_RS03940 IPR013785 Aldolase-type TIM barrel SE87_RS03945 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site SE87_RS03945 IPR002305 Aminoacyl-tRNA synthetase, class Ic SE87_RS03945 IPR002307 Tyrosine-tRNA ligase SE87_RS03945 IPR002942 RNA-binding S4 domain SE87_RS03945 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SE87_RS03945 IPR024088 Tyrosine-tRNA ligase, bacterial-type SE87_RS03945 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 SE87_RS03950 IPR003607 HD/PDEase domain SE87_RS03950 IPR004095 TGS SE87_RS03950 IPR004811 RelA/SpoT family SE87_RS03950 IPR007685 RelA/SpoT SE87_RS03950 IPR012675 Beta-grasp domain SE87_RS03950 IPR012676 TGS-like SE87_RS03955 IPR003716 DNA-directed RNA polymerase, omega subunit SE87_RS03955 IPR006110 RNA polymerase, subunit omega/K/RPB6 SE87_RS03955 IPR012293 RNA polymerase subunit, RPB6/omega SE87_RS03960 IPR001048 Aspartate/glutamate/uridylate kinase SE87_RS03960 IPR011817 Uridylate kinase SE87_RS03960 IPR015963 Uridylate kinase, bacteria SE87_RS03965 IPR003773 Menaquinone biosynthesis enzyme SE87_RS03965 IPR030868 SE87_RS03965 SE87_RS03970 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha SE87_RS03970 IPR004406 Aconitase B, bacterial SE87_RS03970 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SE87_RS03970 IPR015929 Aconitase B, N-terminal, bacterial SE87_RS03970 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 SE87_RS03970 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 SE87_RS03970 IPR015933 Aconitase B, HEAT-like, bacterial SE87_RS03970 IPR015937 Aconitase/isopropylmalate dehydratase SE87_RS03970 IPR018136 Aconitase family, 4Fe-4S cluster binding site SE87_RS03985 IPR003678 Putative outer membrane protein SE87_RS04000 IPR004564 Outer membrane lipoprotein carrier protein LolA-like SE87_RS04000 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria SE87_RS04000 IPR029046 Lipoprotein localisation LolA/LolB/LppX SE87_RS04005 IPR000185 Protein translocase subunit SecA SE87_RS04005 IPR001650 Helicase, C-terminal SE87_RS04005 IPR004027 SEC-C motif SE87_RS04005 IPR011115 SecA DEAD-like, N-terminal SE87_RS04005 IPR011116 SecA Wing/Scaffold SE87_RS04005 IPR011130 SecA preprotein, cross-linking domain SE87_RS04005 IPR020937 SecA conserved site SE87_RS04005 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS04010 IPR003838 Permease FtsX-like SE87_RS04010 IPR025857 MacB-like periplasmic core domain SE87_RS04015 IPR003678 Putative outer membrane protein SE87_RS04025 IPR000055 Restriction endonuclease, type I, HsdS SE87_RS04030 IPR001757 Cation-transporting P-type ATPase SE87_RS04030 IPR006121 Heavy metal-associated domain, HMA SE87_RS04030 IPR008250 P-type ATPase, A domain SE87_RS04030 IPR017969 Heavy-metal-associated, conserved site SE87_RS04030 IPR018303 P-type ATPase, phosphorylation site SE87_RS04030 IPR023214 HAD-like domain SE87_RS04030 IPR023299 P-type ATPase, cytoplasmic domain N SE87_RS04030 IPR027256 Cation-transporting P-type ATPase, subfamily IB SE87_RS04035 IPR000523 Magnesium chelatase, ChlI subunit SE87_RS04035 IPR004482 Mg chelatase-related protein SE87_RS04035 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SE87_RS04035 IPR020568 Ribosomal protein S5 domain 2-type fold SE87_RS04035 IPR025158 Mg chelatase-related protein, C-terminal domain SE87_RS04035 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SE87_RS04035 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS04040 IPR000181 Formylmethionine deformylase SE87_RS04040 IPR023635 Peptide deformylase SE87_RS04045 IPR001907 ATP-dependent Clp protease proteolytic subunit SE87_RS04045 IPR018215 ClpP, active site SE87_RS04045 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA SE87_RS04045 IPR029045 ClpP/crotonase-like domain SE87_RS04045 IPR033135 SE87_RS04045 SE87_RS04050 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain SE87_RS04050 IPR005215 Trigger factor SE87_RS04050 IPR008880 Trigger factor, C-terminal domain SE87_RS04050 IPR008881 Trigger factor, ribosome-binding, bacterial SE87_RS04050 IPR027304 Trigger factor/SurA domain SE87_RS04055 IPR002718 Outer membrane protein, Helicobacter SE87_RS04060 IPR007876 Neuraminyllactose-binding hemagglutinin SE87_RS04065 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain SE87_RS04065 IPR023045 Molybdenum cofactor biosynthesis C SE87_RS04065 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type SE87_RS04070 IPR001453 Molybdopterin binding domain SE87_RS04070 IPR008284 Molybdenum cofactor biosynthesis, conserved site SE87_RS04075 IPR003448 Molybdopterin biosynthesis MoaE SE87_RS04080 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 SE87_RS04080 IPR012675 Beta-grasp domain SE87_RS04080 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp SE87_RS04085 IPR000926 GTP cyclohydrolase II, RibA SE87_RS04085 IPR032677 SE87_RS04085 SE87_RS04090 IPR025079 Domain of unknown function DUF3943 SE87_RS04095 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB SE87_RS04095 IPR017945 DHBP synthase RibB-like alpha/beta domain SE87_RS04095 IPR032677 SE87_RS04095 SE87_RS04100 IPR002654 Glycosyl transferase, family 25 SE87_RS04105 IPR002725 Protein of unknown function DUF45 SE87_RS04105 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS04110 IPR000531 TonB-dependent receptor, beta-barrel SE87_RS04110 IPR012910 TonB-dependent receptor, plug SE87_RS04115 IPR002582 Holo-[acyl carrier protein] synthase SE87_RS04115 IPR004568 Phosphopantethiene-protein transferase domain SE87_RS04115 IPR008278 4'-phosphopantetheinyl transferase superfamily SE87_RS04120 IPR005503 Flagellar basal body-associated protein FliL SE87_RS04125 IPR004398 RNA methyltransferase, RsmD SE87_RS04125 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS04135 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA SE87_RS04135 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS04140 IPR001279 Beta-lactamase-like SE87_RS04145 IPR000594 UBA/THIF-type NAD/FAD binding fold SE87_RS04145 IPR016040 NAD(P)-binding domain SE87_RS04150 IPR000540 Flagellar motor protein MotA, conserved site SE87_RS04150 IPR002898 MotA/TolQ/ExbB proton channel SE87_RS04150 IPR022522 Flagellar motor stator, MotA SE87_RS04155 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal SE87_RS04155 IPR025713 Motility protein B, N-terminal domain SE87_RS04165 IPR000515 MetI-like domain SE87_RS04165 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain SE87_RS04170 IPR003439 ABC transporter-like SE87_RS04170 IPR003593 AAA+ ATPase domain SE87_RS04170 IPR017871 ABC transporter, conserved site SE87_RS04170 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS04185 IPR000305 GIY-YIG nuclease superfamily SE87_RS04185 IPR001162 UvrC family homology region SE87_RS04185 IPR001943 UVR domain SE87_RS04185 IPR004791 UvrABC system, subunit C SE87_RS04185 IPR010994 RuvA domain 2-like SE87_RS04185 IPR027299 GIY-YIG domain SE87_RS04190 IPR001342 Homoserine dehydrogenase, catalytic SE87_RS04190 IPR002912 ACT domain SE87_RS04190 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding SE87_RS04190 IPR016040 NAD(P)-binding domain SE87_RS04190 IPR016204 Homoserine dehydrogenase SE87_RS04190 IPR019811 Homoserine dehydrogenase, conserved site SE87_RS04195 IPR003509 Uncharacterised protein family UPF0102 SE87_RS04195 IPR011335 Restriction endonuclease type II-like SE87_RS04195 IPR011856 tRNA endonuclease-like domain SE87_RS04200 IPR005746 Thioredoxin SE87_RS04200 IPR012336 Thioredoxin-like fold SE87_RS04200 IPR013766 Thioredoxin domain SE87_RS04200 IPR017937 Thioredoxin, conserved site SE87_RS04205 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II SE87_RS04205 IPR005982 Thioredoxin reductase SE87_RS04205 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site SE87_RS04205 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain SE87_RS04210 IPR002654 Glycosyl transferase, family 25 SE87_RS04215 IPR000504 RNA recognition motif domain SE87_RS04215 IPR012677 Nucleotide-binding, alpha-beta plait SE87_RS04220 IPR000568 ATPase, F0 complex, subunit A SE87_RS04220 IPR023011 ATPase, F0 complex, subunit A, active site SE87_RS04225 IPR000644 CBS domain SE87_RS04225 IPR001093 IMP dehydrogenase/GMP reductase SE87_RS04225 IPR005990 Inosine-5'-monophosphate dehydrogenase SE87_RS04225 IPR013785 Aldolase-type TIM barrel SE87_RS04225 IPR015875 IMP dehydrogenase / GMP reductase, conserved site SE87_RS04230 IPR000120 Amidase SE87_RS04230 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit SE87_RS04230 IPR020556 Amidase, conserved site SE87_RS04230 IPR023631 Amidase signature domain SE87_RS04235 IPR001977 Dephospho-CoA kinase SE87_RS04235 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS04240 IPR001045 Spermidine/spermine synthases family SE87_RS04240 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS04250 IPR005225 Small GTP-binding protein domain SE87_RS04250 IPR006073 GTP binding domain SE87_RS04250 IPR015946 K homology domain-like, alpha/beta SE87_RS04250 IPR016484 GTP-binding protein EngA SE87_RS04250 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS04250 IPR032859 SE87_RS04250 SE87_RS04255 IPR000119 Histone-like bacterial DNA-binding protein SE87_RS04255 IPR010992 Integration host factor (IHF)-like DNA-binding domain SE87_RS04265 IPR024952 Lipoprotein LPP20-like SE87_RS04275 IPR005017 Membrane protein, aromatic hydrocarbon degradation SE87_RS04280 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain SE87_RS04280 IPR016040 NAD(P)-binding domain SE87_RS04280 IPR020025 Pseudaminic acid biosynthesis, PseB SE87_RS04285 IPR003382 Flavoprotein SE87_RS04285 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC SE87_RS04285 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal SE87_RS04295 IPR003733 Thiamine phosphate synthase SE87_RS04295 IPR013785 Aldolase-type TIM barrel SE87_RS04295 IPR022998 Thiamin phosphate synthase superfamily SE87_RS04300 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase SE87_RS04300 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase SE87_RS04300 IPR029056 Ribokinase-like SE87_RS04305 IPR000417 Hydroxyethylthiazole kinase SE87_RS04305 IPR029056 Ribokinase-like SE87_RS04310 IPR004473 Restriction endonuclease, type I, HsdR SE87_RS04310 IPR006935 Helicase/UvrB domain SE87_RS04310 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal SE87_RS04310 IPR014001 Helicase, superfamily 1/2, ATP-binding domain SE87_RS04310 IPR022625 Type I restriction and modification enzyme, subunit R, C-terminal SE87_RS04310 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS04320 IPR000055 Restriction endonuclease, type I, HsdS SE87_RS04330 IPR002052 DNA methylase, N-6 adenine-specific, conserved site SE87_RS04330 IPR003356 DNA methylase, adenine-specific SE87_RS04330 IPR004546 Restriction endonuclease, type I, HsdM SE87_RS04330 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain SE87_RS04330 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS04335 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SE87_RS04345 IPR003439 ABC transporter-like SE87_RS04345 IPR003593 AAA+ ATPase domain SE87_RS04345 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS04345 IPR032781 SE87_RS04345 SE87_RS04350 IPR001093 IMP dehydrogenase/GMP reductase SE87_RS04350 IPR005994 Guanosine monophosphate reductase, type2 SE87_RS04350 IPR013785 Aldolase-type TIM barrel SE87_RS04350 IPR015875 IMP dehydrogenase / GMP reductase, conserved site SE87_RS04355 IPR004299 Membrane bound O-acyl transferase, MBOAT SE87_RS04355 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB SE87_RS04355 IPR028362 Alginate O-acetyltransferase AlgI SE87_RS04365 IPR001347 Sugar isomerase (SIS) SE87_RS04365 IPR004515 Phosphoheptose isomerase SE87_RS04370 IPR004821 Cytidyltransferase-like domain SE87_RS04370 IPR011611 Carbohydrate kinase PfkB SE87_RS04370 IPR011913 RfaE bifunctional protein, domain I SE87_RS04370 IPR011914 RfaE bifunctional protein, domain II SE87_RS04370 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SE87_RS04370 IPR023030 Bifunctional protein HldE SE87_RS04370 IPR029056 Ribokinase-like SE87_RS04375 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain SE87_RS04375 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase SE87_RS04375 IPR016040 NAD(P)-binding domain SE87_RS04380 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase SE87_RS04380 IPR006543 Histidinol-phosphate phosphatase SE87_RS04380 IPR006549 HAD-superfamily hydrolase,subfamily IIIA SE87_RS04380 IPR023214 HAD-like domain SE87_RS04390 IPR004619 Type III pantothenate kinase SE87_RS04395 IPR015943 WD40/YVTN repeat-like-containing domain SE87_RS04395 IPR017986 WD40-repeat-containing domain SE87_RS04395 IPR032737 SE87_RS04395 SE87_RS04405 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase SE87_RS04405 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase SE87_RS04405 IPR029054 dUTPase-like SE87_RS04410 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal SE87_RS04410 IPR006359 Transcription elongation factor GreA SE87_RS04410 IPR018151 Transcription elongation factor, GreA/GreB, conserved site SE87_RS04410 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal SE87_RS04410 IPR023459 Transcription elongation factor GreA/GreB family SE87_RS04410 IPR028624 Transcription elongation factor GreA/GreB SE87_RS04415 IPR003835 Glycosyl transferase, family 19 SE87_RS04425 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF SE87_RS04425 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site SE87_RS04430 IPR001444 Flagellar basal body rod protein, N-terminal SE87_RS04430 IPR010810 Flagellin hook, IN motif SE87_RS04430 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SE87_RS04430 IPR011491 Flagellar basal body FlaE SE87_RS04430 IPR012835 Flagellar hook FlgE SE87_RS04430 IPR020013 Fagellar hook-basal body protein, FlgE/F/G SE87_RS04435 IPR003763 CDP-diacylglycerol pyrophosphatase SE87_RS04435 IPR011146 HIT-like domain SE87_RS04435 IPR015993 CDP-diacylglycerol pyrophosphatase, proteobacterial SE87_RS04440 IPR004624 PhnA protein SE87_RS04440 IPR013987 PhnA protein, N-terminal SE87_RS04440 IPR013988 PhnA protein, C-terminal SE87_RS04450 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SE87_RS04455 IPR002226 Catalase haem-binding site SE87_RS04455 IPR010582 Catalase immune-responsive domain SE87_RS04455 IPR011614 Catalase core domain SE87_RS04455 IPR018028 Catalase, mono-functional, haem-containing SE87_RS04455 IPR020835 Catalase-like domain SE87_RS04455 IPR024708 Catalase active site SE87_RS04455 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 SE87_RS04460 IPR000531 TonB-dependent receptor, beta-barrel SE87_RS04460 IPR012910 TonB-dependent receptor, plug SE87_RS04465 IPR002176 Crossover junction endodeoxyribonuclease RuvC SE87_RS04465 IPR012337 Ribonuclease H-like domain SE87_RS04465 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site SE87_RS04475 IPR021139 NYN domain, limkain-b1-type SE87_RS04475 IPR029060 PIN domain-like SE87_RS04490 IPR000085 Bacterial DNA recombination protein RuvA SE87_RS04490 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 SE87_RS04490 IPR010994 RuvA domain 2-like SE87_RS04490 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal SE87_RS04490 IPR012340 Nucleic acid-binding, OB-fold SE87_RS04490 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial SE87_RS04495 IPR005646 Protein of unknown function DUF342 SE87_RS04500 IPR004268 Flagellin assembly, membrane protein MviN SE87_RS04505 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding SE87_RS04505 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SE87_RS04505 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR SE87_RS04505 IPR015803 Cysteine-tRNA ligase SE87_RS04505 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase SE87_RS04505 IPR032678 SE87_RS04505 SE87_RS04510 IPR003842 Vacuolating cytotoxin SE87_RS04510 IPR005546 Autotransporter beta-domain SE87_RS04515 IPR003439 ABC transporter-like SE87_RS04515 IPR003593 AAA+ ATPase domain SE87_RS04515 IPR017871 ABC transporter, conserved site SE87_RS04515 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS04520 IPR000522 ABC transporter, permease protein SE87_RS04520 IPR029022 ABC transporter, BtuC-like SE87_RS04525 IPR002347 Glucose/ribitol dehydrogenase SE87_RS04525 IPR016040 NAD(P)-binding domain SE87_RS04525 IPR020904 Short-chain dehydrogenase/reductase, conserved site SE87_RS04530 IPR006683 Thioesterase superfamily SE87_RS04530 IPR029069 HotDog domain SE87_RS04535 IPR004386 Toxin-antitoxin system, YafQ-like toxin SE87_RS04535 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family SE87_RS04545 IPR004386 Toxin-antitoxin system, YafQ-like toxin SE87_RS04545 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family SE87_RS04560 IPR002718 Outer membrane protein, Helicobacter SE87_RS04580 IPR002780 Hydrogenase formation HypD protein SE87_RS04585 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SE87_RS04585 IPR019812 Hydrogenase assembly chaperone, conserved site SE87_RS04590 IPR003495 CobW/HypB/UreG domain SE87_RS04590 IPR004392 Hydrogenase accessory protein HypB SE87_RS04590 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS04600 IPR011051 RmlC-like cupin domain SE87_RS04600 IPR014710 RmlC-like jelly roll fold SE87_RS04610 IPR002505 Phosphate acetyl/butaryl transferase SE87_RS04615 IPR002505 Phosphate acetyl/butaryl transferase SE87_RS04620 IPR002505 Phosphate acetyl/butaryl transferase SE87_RS04625 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS04630 IPR021136 Flagellar hook-length control protein-like, C-terminal SE87_RS04635 IPR005648 Flagellar hook capping protein SE87_RS04635 IPR025965 FlgD Ig-like domain SE87_RS04640 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SE87_RS04640 IPR019776 Flagellar basal body rod protein, conserved site SE87_RS04640 IPR020013 Fagellar hook-basal body protein, FlgE/F/G SE87_RS04650 IPR002052 DNA methylase, N-6 adenine-specific, conserved site SE87_RS04650 IPR011639 Restriction modification methylase Eco57I SE87_RS04650 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS04655 IPR000212 DNA helicase, UvrD/REP type SE87_RS04655 IPR014016 UvrD-like Helicase, ATP-binding domain SE87_RS04655 IPR014017 DNA helicase, UvrD-like, C-terminal SE87_RS04655 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS04660 IPR002718 Outer membrane protein, Helicobacter SE87_RS04665 IPR002718 Outer membrane protein, Helicobacter SE87_RS04675 IPR003678 Putative outer membrane protein SE87_RS04680 IPR000531 TonB-dependent receptor, beta-barrel SE87_RS04685 IPR012910 TonB-dependent receptor, plug SE87_RS04690 IPR017945 DHBP synthase RibB-like alpha/beta domain SE87_RS04695 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain SE87_RS04695 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain SE87_RS04695 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain SE87_RS04695 IPR006275 Carbamoyl-phosphate synthase, large subunit SE87_RS04695 IPR011607 Methylglyoxal synthase-like domain SE87_RS04695 IPR013815 ATP-grasp fold, subdomain 1 SE87_RS04695 IPR013816 ATP-grasp fold, subdomain 2 SE87_RS04695 IPR016185 Pre-ATP-grasp domain SE87_RS04700 IPR006214 Bax inhibitor 1-related SE87_RS04705 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I SE87_RS04705 IPR016040 NAD(P)-binding domain SE87_RS04705 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain SE87_RS04705 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain SE87_RS04705 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site SE87_RS04705 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family SE87_RS04710 IPR004311 Vacuolating cytotoxin, putative SE87_RS04710 IPR005546 Autotransporter beta-domain SE87_RS04715 IPR002718 Outer membrane protein, Helicobacter SE87_RS04720 IPR004370 4-oxalocrotonate tautomerase SE87_RS04720 IPR014347 Tautomerase/MIF superfamily SE87_RS04720 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type SE87_RS04725 IPR000093 DNA recombination protein RecR SE87_RS04725 IPR015967 Recombination protein RecR, conserved site SE87_RS04725 IPR023627 Recombination protein RecR SE87_RS04725 IPR023628 Recombination protein RecR, C4-type zinc finger SE87_RS04730 IPR001656 Pseudouridine synthase, TruD SE87_RS04730 IPR020103 Pseudouridine synthase, catalytic domain SE87_RS04730 IPR020119 Pseudouridine synthase TruD, conserved site SE87_RS04735 IPR001915 Peptidase M48 SE87_RS04735 IPR022919 Peptidase M48, protease HtpX, putative SE87_RS04740 IPR001474 GTP cyclohydrolase I SE87_RS04740 IPR018234 GTP cyclohydrolase I, conserved site SE87_RS04740 IPR020602 GTP cyclohydrolase I domain SE87_RS04745 IPR000092 Polyprenyl synthetase SE87_RS04745 IPR008949 Terpenoid synthase SE87_RS04745 IPR017446 Polyprenyl synthetase-related SE87_RS04750 IPR002828 Survival protein SurE-like phosphatase/nucleotidase SE87_RS04750 IPR030048 SE87_RS04750 SE87_RS04760 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein SE87_RS04765 IPR013785 Aldolase-type TIM barrel SE87_RS04765 IPR024924 7-carboxy-7-deazaguanine synthase-like SE87_RS04770 IPR000182 GNAT domain SE87_RS04770 IPR016181 Acyl-CoA N-acyltransferase SE87_RS04780 IPR011701 Major facilitator superfamily SE87_RS04780 IPR020846 Major facilitator superfamily domain SE87_RS04785 IPR011089 Domain of unknown function DUF1524 SE87_RS04790 IPR004919 Domain of unknown function DUF262 SE87_RS04795 IPR000515 MetI-like domain SE87_RS04795 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family SE87_RS04800 IPR001638 Extracellular solute-binding protein, family 3 SE87_RS04800 IPR018313 Extracellular solute-binding protein, family 3, conserved site SE87_RS04805 IPR000821 Alanine racemase SE87_RS04805 IPR001608 Alanine racemase, N-terminal SE87_RS04805 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal SE87_RS04805 IPR011079 Alanine racemase, C-terminal SE87_RS04805 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site SE87_RS04805 IPR029066 PLP-binding barrel SE87_RS04810 IPR001463 Sodium:alanine symporter SE87_RS04815 IPR006076 FAD dependent oxidoreductase SE87_RS04815 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain SE87_RS04820 IPR006056 Enamine/imine deaminase YjgF-like SE87_RS04820 IPR006175 YjgF/Yer057p/UK114 family SE87_RS04820 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SE87_RS04820 IPR019897 YjgF-like protein, conserved site SE87_RS04830 IPR025113 TRL-like protein family SE87_RS04850 IPR018461 Na+/H+ antiporter, NhaC-like SE87_RS04865 IPR003742 SPOUT methyltransferase, predicted SE87_RS04865 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SE87_RS04865 IPR029028 Alpha/beta knot methyltransferases SE87_RS04870 IPR000022 Carboxyl transferase SE87_RS04870 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit SE87_RS04870 IPR029045 ClpP/crotonase-like domain SE87_RS04875 IPR022572 DNA replication/recombination mediator RecO, N-terminal SE87_RS04880 IPR008136 CinA, C-terminal SE87_RS04890 IPR000415 Nitroreductase-like SE87_RS04890 IPR029479 Nitroreductase SE87_RS04895 IPR001640 Prolipoprotein diacylglyceryl transferase SE87_RS04900 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F SE87_RS04900 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site SE87_RS04900 IPR020103 Pseudouridine synthase, catalytic domain SE87_RS04905 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal SE87_RS04910 IPR003743 Protein of unknown function DUF164 SE87_RS04915 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SE87_RS04920 IPR002310 Glycine-tRNA ligase, alpha subunit SE87_RS04925 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal SE87_RS04925 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent SE87_RS04925 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like SE87_RS04925 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal SE87_RS04925 IPR013328 Dehydrogenase, multihelical SE87_RS04925 IPR016040 NAD(P)-binding domain SE87_RS04930 IPR003231 Acyl carrier protein (ACP) SE87_RS04930 IPR009081 Acyl carrier protein-like SE87_RS04935 IPR022812 Dynamin superfamily SE87_RS04935 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS04945 IPR022812 Dynamin superfamily SE87_RS04945 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS04950 IPR022812 Dynamin superfamily SE87_RS04950 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS04955 IPR016368 Virulence-associated protein D SE87_RS04955 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 SE87_RS04960 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal SE87_RS04960 IPR021634 Protein of unknown function DUF3240 SE87_RS04965 IPR001036 Acriflavin resistance protein SE87_RS04965 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA SE87_RS04965 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SE87_RS04975 IPR003423 Outer membrane efflux protein SE87_RS04980 IPR015944 Glycine-tRNA ligase, beta subunit SE87_RS04990 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent SE87_RS04990 IPR006124 Metalloenzyme SE87_RS04990 IPR011258 BPG-independent PGAM, N-terminal SE87_RS04990 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha SE87_RS04990 IPR017850 Alkaline-phosphatase-like, core domain SE87_RS04995 IPR003837 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit SE87_RS05005 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type SE87_RS05005 IPR027304 Trigger factor/SurA domain SE87_RS05010 IPR003494 SHS2 domain inserted in FtsA SE87_RS05010 IPR020823 Cell division protein FtsA SE87_RS05015 IPR000158 Cell division protein FtsZ SE87_RS05015 IPR003008 Tubulin/FtsZ, GTPase domain SE87_RS05015 IPR008280 Tubulin/FtsZ, C-terminal SE87_RS05015 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain SE87_RS05015 IPR020805 Cell division protein FtsZ, conserved site SE87_RS05015 IPR024757 Cell division protein FtsZ, C-terminal SE87_RS05025 IPR008915 Peptidase M50 SE87_RS05055 IPR006685 Mechanosensitive ion channel MscS SE87_RS05055 IPR010920 Like-Sm (LSM) domain SE87_RS05055 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 SE87_RS05055 IPR011066 Mechanosensitive ion channel MscS, C-terminal SE87_RS05075 IPR011335 Restriction endonuclease type II-like SE87_RS05075 IPR011856 tRNA endonuclease-like domain SE87_RS05075 IPR015093 Protein of unknown function DUF1887 SE87_RS05090 IPR002686 Transposase IS200-like SE87_RS05095 IPR001959 Transposase, probable, IS891/IS1136/IS1341 SE87_RS05095 IPR010095 Transposase IS605, OrfB, C-terminal SE87_RS05095 IPR021027 Transposase, putative, helix-turn-helix domain SE87_RS05120 IPR014942 Protein of unknown function DUF1814 SE87_RS05125 IPR002104 Integrase, catalytic SE87_RS05125 IPR011010 DNA breaking-rejoining enzyme, catalytic core SE87_RS05125 IPR013762 Integrase-like, catalytic core SE87_RS05125 IPR023109 Integrase/recombinase, N-terminal SE87_RS05135 IPR001959 Transposase, probable, IS891/IS1136/IS1341 SE87_RS05135 IPR010095 Transposase IS605, OrfB, C-terminal SE87_RS05135 IPR021027 Transposase, putative, helix-turn-helix domain SE87_RS05140 IPR002686 Transposase IS200-like SE87_RS05150 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain SE87_RS05150 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS05175 IPR004386 Toxin-antitoxin system, YafQ-like toxin SE87_RS05175 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family SE87_RS05180 IPR003688 Ti-type conjugative transfer system, TraG-like SE87_RS05180 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS05190 IPR002686 Transposase IS200-like SE87_RS05195 IPR002104 Integrase, catalytic SE87_RS05195 IPR011010 DNA breaking-rejoining enzyme, catalytic core SE87_RS05195 IPR013762 Integrase-like, catalytic core SE87_RS05205 IPR003414 Polyphosphate kinase SE87_RS05205 IPR024953 Polyphosphate kinase middle domain SE87_RS05205 IPR025198 Polyphosphate kinase N-terminal domain SE87_RS05205 IPR025200 Polyphosphate kinase C-terminal domain SE87_RS05210 IPR001295 Dihydroorotate dehydrogenase, conserved site SE87_RS05210 IPR005719 Dihydroorotate dehydrogenase, class 2 SE87_RS05210 IPR005720 Dihydroorotate dehydrogenase domain SE87_RS05210 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 SE87_RS05210 IPR013785 Aldolase-type TIM barrel SE87_RS05215 IPR001431 Peptidase M16, zinc-binding site SE87_RS05215 IPR007863 Peptidase M16, C-terminal domain SE87_RS05215 IPR011237 Peptidase M16 domain SE87_RS05215 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like SE87_RS05215 IPR011765 Peptidase M16, N-terminal SE87_RS05220 IPR002220 DapA-like SE87_RS05220 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA SE87_RS05220 IPR013785 Aldolase-type TIM barrel SE87_RS05220 IPR020625 Dihydrodipicolinate synthetase, active site SE87_RS05225 IPR002347 Glucose/ribitol dehydrogenase SE87_RS05225 IPR016040 NAD(P)-binding domain SE87_RS05235 IPR000462 CDP-alcohol phosphatidyltransferase SE87_RS05235 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase SE87_RS05240 IPR002293 Amino acid/polyamine transporter I SE87_RS05240 IPR004840 Amino acid permease, conserved site SE87_RS05240 IPR004841 Amino acid permease/ SLC12A domain SE87_RS05245 IPR001478 PDZ domain SE87_RS05245 IPR001940 Peptidase S1C SE87_RS05245 IPR009003 Trypsin-like cysteine/serine peptidase domain SE87_RS05245 IPR011782 Peptidase S1C, Do SE87_RS05250 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SE87_RS05250 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase SE87_RS05250 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site SE87_RS05250 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site SE87_RS05250 IPR026596 Bifunctional enzyme IspD/IspF SE87_RS05250 IPR029044 Nucleotide-diphospho-sugar transferases SE87_RS05255 IPR001789 Signal transduction response regulator, receiver domain SE87_RS05255 IPR009057 Homeodomain-like SE87_RS05255 IPR011006 CheY-like superfamily SE87_RS05255 IPR014483 Fis-like DNA-binding domain-containing signal transduction response regulator, predicted SE87_RS05260 IPR002421 5'-3' exonuclease, N-terminal SE87_RS05260 IPR008918 Helix-hairpin-helix motif, class 2 SE87_RS05260 IPR020045 5'-3' exonuclease, C-terminal domain SE87_RS05260 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal SE87_RS05260 IPR029060 PIN domain-like SE87_RS05270 IPR001623 DnaJ domain SE87_RS05270 IPR002939 Chaperone DnaJ, C-terminal SE87_RS05270 IPR008971 HSP40/DnaJ peptide-binding SE87_RS05270 IPR018253 DnaJ domain, conserved site SE87_RS05275 IPR000551 MerR-type HTH domain SE87_RS05275 IPR009061 DNA binding domain, putative SE87_RS05280 IPR003593 AAA+ ATPase domain SE87_RS05280 IPR008824 DNA helicase, Holliday junction RuvB type, N-terminal SE87_RS05280 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal SE87_RS05280 IPR021886 MgsA AAA+ ATPase C-terminal SE87_RS05280 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS05280 IPR032423 SE87_RS05280 SE87_RS05285 IPR002481 Ferric-uptake regulator SE87_RS05285 IPR011991 Winged helix-turn-helix DNA-binding domain SE87_RS05290 IPR019223 Domain of unknown function DUF2147 SE87_RS05295 IPR004375 Conserved hypothetical protein CHP00022 SE87_RS05300 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb SE87_RS05300 IPR001543 Surface presentation of antigen (SpoA) SE87_RS05300 IPR012826 Flagellar motor switch FliN SE87_RS05300 IPR028976 CheC-like domain SE87_RS05305 IPR001543 Surface presentation of antigen (SpoA) SE87_RS05305 IPR001689 Flagellar motor switch protein FliM SE87_RS05305 IPR028976 CheC-like domain SE87_RS05310 IPR000943 RNA polymerase sigma-70 SE87_RS05310 IPR007627 RNA polymerase sigma-70 region 2 SE87_RS05310 IPR007630 RNA polymerase sigma-70 region 4 SE87_RS05310 IPR011991 Winged helix-turn-helix DNA-binding domain SE87_RS05310 IPR012845 RNA polymerase sigma factor, FliA/WhiG SE87_RS05310 IPR013324 RNA polymerase sigma factor, region 3/4 SE87_RS05310 IPR013325 RNA polymerase sigma factor, region 2 SE87_RS05310 IPR014284 RNA polymerase sigma-70 like domain SE87_RS05320 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain SE87_RS05320 IPR025501 ATP binding protein MinD SE87_RS05320 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS05325 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain SE87_RS05325 IPR003593 AAA+ ATPase domain SE87_RS05325 IPR020006 Signal-recognition particle (SRP)-type GTPase SE87_RS05325 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS05330 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK SE87_RS05335 IPR000587 Creatinase, N-terminal SE87_RS05335 IPR000994 Peptidase M24, structural domain SE87_RS05335 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site SE87_RS05335 IPR028980 Creatinase/Aminopeptidase P, N-terminal SE87_RS05335 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal SE87_RS05340 IPR001874 Dehydroquinase, class II SE87_RS05340 IPR018509 Dehydroquinase, class II, conserved site SE87_RS05345 IPR007016 O-antigen ligase-related SE87_RS05350 IPR000589 Ribosomal protein S15 SE87_RS05350 IPR005290 Ribosomal protein S15, bacterial-type SE87_RS05350 IPR009068 S15/NS1, RNA-binding SE87_RS05355 IPR001712 Type III secretion system FHIPEP SE87_RS05355 IPR006301 Flagellar biosynthesis protein FlhA SE87_RS05355 IPR025505 FHIPEP conserved site SE87_RS05365 IPR001789 Signal transduction response regulator, receiver domain SE87_RS05365 IPR001867 Signal transduction response regulator, C-terminal SE87_RS05365 IPR011006 CheY-like superfamily SE87_RS05365 IPR011991 Winged helix-turn-helix DNA-binding domain SE87_RS05365 IPR016032 Signal transduction response regulator, C-terminal effector SE87_RS05370 IPR004843 Calcineurin-like phosphoesterase domain, apaH type SE87_RS05370 IPR029052 Metallo-dependent phosphatase-like SE87_RS05375 IPR000873 AMP-dependent synthetase/ligase SE87_RS05375 IPR011904 Acetate-CoA ligase SE87_RS05375 IPR020845 AMP-binding, conserved site SE87_RS05375 IPR025110 AMP-binding enzyme C-terminal domain SE87_RS05375 IPR032387 SE87_RS05375 SE87_RS05380 IPR003728 Ribosome maturation factor RimP SE87_RS05380 IPR028989 Ribosome maturation factor RimP, N-terminal SE87_RS05385 IPR000238 Ribosome-binding factor A SE87_RS05385 IPR015946 K homology domain-like, alpha/beta SE87_RS05385 IPR020053 Ribosome-binding factor A, conserved site SE87_RS05385 IPR023799 Ribosome-binding factor A domain SE87_RS05390 IPR000178 Translation initiation factor aIF-2, bacterial-like SE87_RS05390 IPR005225 Small GTP-binding protein domain SE87_RS05390 IPR006847 Translation initiation factor IF-2, N-terminal SE87_RS05390 IPR009000 Translation protein, beta-barrel domain SE87_RS05390 IPR023115 Translation initiation factor IF- 2, domain 3 SE87_RS05390 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS05395 IPR007393 Domain of unknown function DUF448 SE87_RS05400 IPR000870 Homoserine kinase SE87_RS05400 IPR006203 GHMP kinase, ATP-binding, conserved site SE87_RS05400 IPR006204 GHMP kinase N-terminal domain SE87_RS05400 IPR013750 GHMP kinase, C-terminal domain SE87_RS05400 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SE87_RS05400 IPR020568 Ribosomal protein S5 domain 2-type fold SE87_RS05410 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase SE87_RS05410 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal SE87_RS05410 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal SE87_RS05410 IPR020568 Ribosomal protein S5 domain 2-type fold SE87_RS05415 IPR005526 Septum formation inhibitor MinC, C-terminal SE87_RS05415 IPR013033 Septum formation inhibitor MinC SE87_RS05415 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal SE87_RS05425 IPR002718 Outer membrane protein, Helicobacter SE87_RS05430 IPR002718 Outer membrane protein, Helicobacter SE87_RS05440 IPR003700 Ketopantoate hydroxymethyltransferase SE87_RS05440 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain SE87_RS05445 IPR003593 AAA+ ATPase domain SE87_RS05445 IPR004605 DNA helicase, Holliday junction RuvB type SE87_RS05445 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal SE87_RS05445 IPR008824 DNA helicase, Holliday junction RuvB type, N-terminal SE87_RS05445 IPR011991 Winged helix-turn-helix DNA-binding domain SE87_RS05445 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS05450 IPR003998 Twin-arginine translocation protein TatB-like SE87_RS05450 IPR018448 Twin-arginine translocation protein TatB SE87_RS05455 IPR002033 Sec-independent periplasmic protein translocase TatC SE87_RS05455 IPR019820 Sec-independent periplasmic protein translocase, conserved site SE87_RS05460 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA SE87_RS05465 IPR003682 rRNA small subunit methyltransferase G SE87_RS05465 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS05485 IPR002718 Outer membrane protein, Helicobacter SE87_RS05490 IPR001789 Signal transduction response regulator, receiver domain SE87_RS05490 IPR011006 CheY-like superfamily SE87_RS05495 IPR004498 Ribosomal protein L11 methyltransferase SE87_RS05495 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS05500 IPR000642 Peptidase M41 SE87_RS05500 IPR003593 AAA+ ATPase domain SE87_RS05500 IPR003959 ATPase, AAA-type, core SE87_RS05500 IPR003960 ATPase, AAA-type, conserved site SE87_RS05500 IPR005936 Peptidase, FtsH SE87_RS05500 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS05510 IPR000462 CDP-alcohol phosphatidyltransferase SE87_RS05510 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase SE87_RS05515 IPR001757 Cation-transporting P-type ATPase SE87_RS05515 IPR006121 Heavy metal-associated domain, HMA SE87_RS05515 IPR008250 P-type ATPase, A domain SE87_RS05515 IPR017969 Heavy-metal-associated, conserved site SE87_RS05515 IPR018303 P-type ATPase, phosphorylation site SE87_RS05515 IPR023214 HAD-like domain SE87_RS05515 IPR023299 P-type ATPase, cytoplasmic domain N SE87_RS05515 IPR027256 Cation-transporting P-type ATPase, subfamily IB SE87_RS05520 IPR000428 Copper ion binding protein SE87_RS05520 IPR006121 Heavy metal-associated domain, HMA SE87_RS05520 IPR006122 Heavy metal-associated domain, copper ion-binding SE87_RS05520 IPR017969 Heavy-metal-associated, conserved site SE87_RS05530 IPR031489 SE87_RS05530 SE87_RS05530 IPR033397 SE87_RS05530 SE87_RS05530 IPR033398 SE87_RS05530 SE87_RS05535 IPR032411 SE87_RS05535 SE87_RS05540 IPR004688 Nickel/cobalt transporter, high-affinity, bacteria SE87_RS05540 IPR011541 Nickel/cobalt transporter, high-affinity SE87_RS05550 IPR003959 ATPase, AAA-type, core SE87_RS05550 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS05555 IPR007560 Restriction endonuclease type IV, Mrr SE87_RS05555 IPR011335 Restriction endonuclease type II-like SE87_RS05555 IPR011856 tRNA endonuclease-like domain SE87_RS05565 IPR003439 ABC transporter-like SE87_RS05565 IPR003593 AAA+ ATPase domain SE87_RS05565 IPR011527 ABC transporter type 1, transmembrane domain SE87_RS05565 IPR017871 ABC transporter, conserved site SE87_RS05565 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS05570 IPR003678 Putative outer membrane protein SE87_RS05575 IPR002082 Aspartate carbamoyltransferase SE87_RS05575 IPR006130 Aspartate/ornithine carbamoyltransferase SE87_RS05575 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain SE87_RS05575 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding SE87_RS05585 IPR002877 Ribosomal RNA methyltransferase FtsJ domain SE87_RS05585 IPR002942 RNA-binding S4 domain SE87_RS05585 IPR004538 Haemolysin A SE87_RS05585 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS05590 IPR002606 Riboflavin kinase, bacterial SE87_RS05590 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SE87_RS05590 IPR015864 FAD synthetase SE87_RS05590 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic SE87_RS05590 IPR023465 Riboflavin kinase domain SE87_RS05590 IPR023468 Riboflavin kinase SE87_RS05595 IPR005474 Transketolase, N-terminal SE87_RS05595 IPR005475 Transketolase-like, pyrimidine-binding domain SE87_RS05595 IPR005478 Transketolase, bacterial-like SE87_RS05595 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II SE87_RS05595 IPR029061 Thiamin diphosphate-binding fold SE87_RS05595 IPR033247 SE87_RS05595 SE87_RS05595 IPR033248 SE87_RS05595 SE87_RS05600 IPR011335 Restriction endonuclease type II-like SE87_RS05600 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS05605 IPR002543 FtsK domain SE87_RS05605 IPR011991 Winged helix-turn-helix DNA-binding domain SE87_RS05605 IPR018541 FtsK gamma domain SE87_RS05605 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS05610 IPR005829 Sugar transporter, conserved site SE87_RS05610 IPR011701 Major facilitator superfamily SE87_RS05610 IPR020846 Major facilitator superfamily domain SE87_RS05615 IPR001444 Flagellar basal body rod protein, N-terminal SE87_RS05615 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SE87_RS05615 IPR019776 Flagellar basal body rod protein, conserved site SE87_RS05615 IPR020013 Fagellar hook-basal body protein, FlgE/F/G SE87_RS05630 IPR001959 Transposase, probable, IS891/IS1136/IS1341 SE87_RS05630 IPR010095 Transposase IS605, OrfB, C-terminal SE87_RS05630 IPR021027 Transposase, putative, helix-turn-helix domain SE87_RS05635 IPR002686 Transposase IS200-like SE87_RS05645 IPR006597 Sel1-like SE87_RS05645 IPR011990 Tetratricopeptide-like helical domain SE87_RS05645 IPR019734 Tetratricopeptide repeat SE87_RS05650 IPR000887 KDPG/KHG aldolase SE87_RS05650 IPR013785 Aldolase-type TIM barrel SE87_RS05650 IPR031337 SE87_RS05650 SE87_RS05650 IPR031338 SE87_RS05650 SE87_RS05655 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase SE87_RS05655 IPR004786 6-phosphogluconate dehydratase SE87_RS05655 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SE87_RS05655 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site SE87_RS05660 IPR001282 Glucose-6-phosphate dehydrogenase SE87_RS05660 IPR016040 NAD(P)-binding domain SE87_RS05660 IPR019796 Glucose-6-phosphate dehydrogenase, active site SE87_RS05660 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding SE87_RS05660 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal SE87_RS05665 IPR005900 6-phosphogluconolactonase, DevB-type SE87_RS05665 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase SE87_RS05670 IPR003836 Glucokinase SE87_RS05675 IPR002085 Alcohol dehydrogenase superfamily, zinc-type SE87_RS05675 IPR011032 GroES (chaperonin 10)-like SE87_RS05675 IPR013149 Alcohol dehydrogenase, C-terminal SE87_RS05675 IPR013154 Alcohol dehydrogenase GroES-like SE87_RS05675 IPR016040 NAD(P)-binding domain SE87_RS05680 IPR002495 Glycosyl transferase, family 8 SE87_RS05680 IPR029044 Nucleotide-diphospho-sugar transferases SE87_RS05690 IPR002718 Outer membrane protein, Helicobacter SE87_RS05695 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain SE87_RS05695 IPR011894 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate SE87_RS05695 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain SE87_RS05700 IPR011898 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate SE87_RS05700 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SE87_RS05700 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SE87_RS05705 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal SE87_RS05705 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II SE87_RS05705 IPR029061 Thiamin diphosphate-binding fold SE87_RS05705 IPR033412 SE87_RS05705 SE87_RS05710 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding SE87_RS05710 IPR029061 Thiamin diphosphate-binding fold SE87_RS05715 IPR000362 Fumarate lyase family SE87_RS05715 IPR004769 Adenylosuccinate lyase SE87_RS05715 IPR008948 L-Aspartase-like SE87_RS05715 IPR019468 Adenylosuccinate lyase C-terminal SE87_RS05715 IPR020557 Fumarate lyase, conserved site SE87_RS05715 IPR022761 Fumarate lyase, N-terminal SE87_RS05715 IPR024083 Fumarase/histidase, N-terminal SE87_RS05720 IPR002718 Outer membrane protein, Helicobacter SE87_RS05725 IPR001650 Helicase, C-terminal SE87_RS05725 IPR001943 UVR domain SE87_RS05725 IPR004807 UvrABC system, subunit B SE87_RS05725 IPR006935 Helicase/UvrB domain SE87_RS05725 IPR014001 Helicase, superfamily 1/2, ATP-binding domain SE87_RS05725 IPR024759 UvrB, YAD/RRR-motif-containing domain SE87_RS05725 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS05735 IPR021907 Protein of unknown function DUF3519 SE87_RS05740 IPR006597 Sel1-like SE87_RS05740 IPR011990 Tetratricopeptide-like helical domain SE87_RS05745 IPR000101 Gamma-glutamyltranspeptidase SE87_RS05745 IPR029055 Nucleophile aminohydrolases, N-terminal SE87_RS05750 IPR002371 Flagellar hook-associated protein, FlgK SE87_RS05750 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SE87_RS05750 IPR012351 Four-helical cytokine, core SE87_RS05760 IPR001525 C-5 cytosine methyltransferase SE87_RS05760 IPR018117 DNA methylase, C-5 cytosine-specific, active site SE87_RS05760 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS05765 IPR007412 Anti-sigma-28 factor, FlgM SE87_RS05765 IPR031316 SE87_RS05765 SE87_RS05775 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain SE87_RS05775 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type SE87_RS05785 IPR006664 Outer membrane protein, bacterial SE87_RS05785 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal SE87_RS05790 IPR007195 TolB, N-terminal SE87_RS05790 IPR011659 WD40-like Beta Propeller SE87_RS05790 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB SE87_RS05790 IPR015943 WD40/YVTN repeat-like-containing domain SE87_RS05795 IPR006260 TonB, C-terminal SE87_RS05800 IPR003400 Biopolymer transport protein ExbD/TolR SE87_RS05805 IPR002898 MotA/TolQ/ExbB proton channel SE87_RS05805 IPR017269 Biopolymer transport ExbB-like protein 1 SE87_RS05810 IPR001469 ATPase, F1 complex, delta/epsilon subunit SE87_RS05810 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal SE87_RS05815 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain SE87_RS05815 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal SE87_RS05815 IPR003593 AAA+ ATPase domain SE87_RS05815 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain SE87_RS05815 IPR005722 ATPase, F1 complex, beta subunit SE87_RS05815 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site SE87_RS05815 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal SE87_RS05815 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS05820 IPR000131 ATPase, F1 complex, gamma subunit SE87_RS05820 IPR023633 ATPase, F1 complex, gamma subunit domain SE87_RS05825 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain SE87_RS05825 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal SE87_RS05825 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain SE87_RS05825 IPR005294 ATPase, F1 complex, alpha subunit SE87_RS05825 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site SE87_RS05825 IPR023366 ATP synthase subunit alpha-like domain SE87_RS05825 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS05830 IPR000711 ATPase, OSCP/delta subunit SE87_RS05830 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain SE87_RS05835 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast SE87_RS05835 IPR028987 F-type ATP synthase subunit B-like, membrane domain SE87_RS05840 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast SE87_RS05845 IPR003115 ParB/Sulfiredoxin SE87_RS05845 IPR004437 ParB/RepB/Spo0J partition protein family SE87_RS05850 IPR025669 AAA domain SE87_RS05850 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS05855 IPR004143 Biotin/lipoate A/B protein ligase SE87_RS05855 IPR004408 Biotin--acetyl-CoA-carboxylase ligase SE87_RS05860 IPR002376 Formyl transferase, N-terminal SE87_RS05860 IPR005793 Formyl transferase, C-terminal SE87_RS05860 IPR005794 Methionyl-tRNA formyltransferase SE87_RS05860 IPR011034 Formyl transferase, C-terminal-like SE87_RS05865 IPR026866 Uncharacterised chromosomal cassette SCCmec type IVc protein CR006 SE87_RS05865 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS05870 IPR019219 Protein of unknown function DUF2130 SE87_RS05905 IPR001857 Ribosomal protein L19 SE87_RS05905 IPR008991 Translation protein SH3-like domain SE87_RS05905 IPR018257 Ribosomal protein L19, conserved site SE87_RS05910 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria SE87_RS05910 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain SE87_RS05910 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal SE87_RS05910 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SE87_RS05910 IPR029028 Alpha/beta knot methyltransferases SE87_RS05915 IPR002676 RimM protein SE87_RS05915 IPR009000 Translation protein, beta-barrel domain SE87_RS05915 IPR011033 PRC-barrel-like SE87_RS05915 IPR011961 16S rRNA processing protein RimM SE87_RS05915 IPR027275 PRC-barrel domain SE87_RS05920 IPR009019 K homology domain, prokaryotic type SE87_RS05925 IPR000307 Ribosomal protein S16 SE87_RS05925 IPR020592 Ribosomal protein S16, conserved site SE87_RS05925 IPR023803 Ribosomal protein S16 domain SE87_RS05930 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain SE87_RS05930 IPR003593 AAA+ ATPase domain SE87_RS05930 IPR004125 Signal recognition particle, SRP54 subunit, M-domain SE87_RS05930 IPR004780 Signal recognition particle protein Ffh SE87_RS05930 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle SE87_RS05930 IPR022941 Signal recognition particle, SRP54 subunit SE87_RS05930 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS05935 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site SE87_RS05935 IPR002300 Aminoacyl-tRNA synthetase, class Ia SE87_RS05935 IPR002303 Valine-tRNA ligase SE87_RS05935 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain SE87_RS05935 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding SE87_RS05935 IPR010978 tRNA-binding arm SE87_RS05935 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding SE87_RS05935 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SE87_RS05935 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm SE87_RS05940 IPR003775 Flagellar assembly factor FliW SE87_RS05940 IPR024046 Flagellar assembly factor FliW domain SE87_RS05945 IPR004276 Glycosyl transferase, family 28 SE87_RS05945 IPR006009 N-acetylglucosaminyltransferase, MurG SE87_RS05945 IPR007235 Glycosyl transferase, family 28, C-terminal SE87_RS05950 IPR002718 Outer membrane protein, Helicobacter SE87_RS05955 IPR002718 Outer membrane protein, Helicobacter SE87_RS05960 IPR000304 Pyrroline-5-carboxylate reductase SE87_RS05960 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like SE87_RS05960 IPR016040 NAD(P)-binding domain SE87_RS05960 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal SE87_RS05960 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain SE87_RS05965 IPR003812 Fido domain SE87_RS05970 IPR002036 Endoribonuclease YbeY SE87_RS05970 IPR020549 Endoribonuclease YbeY, conserved site SE87_RS05970 IPR023091 Metalloprotease catalytic domain, predicted SE87_RS05975 IPR008254 Flavodoxin/nitric oxide synthase SE87_RS05975 IPR010086 Flavodoxin, long chain SE87_RS05975 IPR029039 Flavoprotein-like SE87_RS05980 IPR032816 SE87_RS05980 SE87_RS05980 IPR032818 SE87_RS05980 SE87_RS05985 IPR004714 Cytochrome oxidase maturation protein cbb3-type SE87_RS05990 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II SE87_RS05990 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain SE87_RS05995 IPR011701 Major facilitator superfamily SE87_RS05995 IPR020846 Major facilitator superfamily domain SE87_RS06000 IPR001672 Phosphoglucose isomerase (PGI) SE87_RS06000 IPR018189 Phosphoglucose isomerase, conserved site SE87_RS06000 IPR023096 Phosphoglucose isomerase, C-terminal SE87_RS06005 IPR003678 Putative outer membrane protein SE87_RS06010 IPR003706 Carbon starvation protein CstA SE87_RS06010 IPR025299 CstA C-terminal domain SE87_RS06015 IPR000515 MetI-like domain SE87_RS06015 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family SE87_RS06020 IPR000515 MetI-like domain SE87_RS06020 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family SE87_RS06025 IPR003439 ABC transporter-like SE87_RS06025 IPR003593 AAA+ ATPase domain SE87_RS06025 IPR017871 ABC transporter, conserved site SE87_RS06025 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS06025 IPR030679 SE87_RS06025 SE87_RS06030 IPR001638 Extracellular solute-binding protein, family 3 SE87_RS06040 IPR005964 Bacterial glucose/galactose transporter SE87_RS06040 IPR011701 Major facilitator superfamily SE87_RS06040 IPR020846 Major facilitator superfamily domain SE87_RS06045 IPR006043 Xanthine/uracil/vitamin C permease SE87_RS06045 IPR029940 SE87_RS06045 SE87_RS06050 IPR002718 Outer membrane protein, Helicobacter SE87_RS06055 IPR000845 Nucleoside phosphorylase domain SE87_RS06055 IPR004402 Purine nucleoside phosphorylase DeoD-type SE87_RS06055 IPR018016 Nucleoside phosphorylase, conserved site SE87_RS06055 IPR018017 Nucleoside phosphorylase SE87_RS06060 IPR006124 Metalloenzyme SE87_RS06060 IPR010045 Phosphopentomutase SE87_RS06060 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha SE87_RS06060 IPR017850 Alkaline-phosphatase-like, core domain SE87_RS06060 IPR024052 Phosphopentomutase DeoB cap domain SE87_RS06065 IPR002668 Concentrative nucleoside transporter N-terminal domain SE87_RS06065 IPR008276 Concentrative nucleoside transporter SE87_RS06065 IPR011657 Concentrative nucleoside transporter C-terminal domain SE87_RS06065 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial SE87_RS06075 IPR011701 Major facilitator superfamily SE87_RS06075 IPR020846 Major facilitator superfamily domain SE87_RS06080 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase SE87_RS06080 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA SE87_RS06080 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SE87_RS06085 IPR006153 Cation/H+ exchanger SE87_RS06090 IPR002528 Multi antimicrobial extrusion protein SE87_RS06095 IPR011701 Major facilitator superfamily SE87_RS06095 IPR020846 Major facilitator superfamily domain SE87_RS06095 IPR023495 Sugar efflux transporter, putative SE87_RS06100 IPR001148 Alpha carbonic anhydrase SE87_RS06100 IPR023561 Carbonic anhydrase, alpha-class SE87_RS06105 IPR008592 Protein of unknown function DUF874 SE87_RS06110 IPR008592 Protein of unknown function DUF874 SE87_RS06115 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site SE87_RS06115 IPR000534 Semialdehyde dehydrogenase, NAD-binding SE87_RS06115 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type SE87_RS06115 IPR012080 Aspartate-semialdehyde dehydrogenase SE87_RS06115 IPR012280 Semialdehyde dehydrogenase, dimerisation domain SE87_RS06115 IPR016040 NAD(P)-binding domain SE87_RS06120 IPR004154 Anticodon-binding SE87_RS06120 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit SE87_RS06120 IPR015807 Histidine-tRNA ligase SE87_RS06125 IPR002201 Glycosyl transferase, family 9 SE87_RS06125 IPR011910 Lipopolysaccharide heptosyltransferase II SE87_RS06135 IPR001395 Aldo/keto reductase SE87_RS06135 IPR023210 NADP-dependent oxidoreductase domain SE87_RS06140 IPR000640 Translation elongation factor EFG, V domain SE87_RS06140 IPR000795 Elongation factor, GTP-binding domain SE87_RS06140 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 SE87_RS06140 IPR004540 Translation elongation factor EFG/EF2 SE87_RS06140 IPR005225 Small GTP-binding protein domain SE87_RS06140 IPR005517 Translation elongation factor EFG/EF2, domain IV SE87_RS06140 IPR009000 Translation protein, beta-barrel domain SE87_RS06140 IPR009022 Elongation factor G, III-V domain SE87_RS06140 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SE87_RS06140 IPR020568 Ribosomal protein S5 domain 2-type fold SE87_RS06140 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS06140 IPR031157 SE87_RS06140 SE87_RS06145 IPR000235 Ribosomal protein S5/S7 SE87_RS06145 IPR005717 Ribosomal protein S7, bacterial/organellar-type SE87_RS06145 IPR020606 Ribosomal protein S7, conserved site SE87_RS06145 IPR023798 Ribosomal protein S7 domain SE87_RS06150 IPR005679 Ribosomal protein S12, bacteria SE87_RS06150 IPR006032 Ribosomal protein S12/S23 SE87_RS06150 IPR012340 Nucleic acid-binding, OB-fold SE87_RS06155 IPR000722 RNA polymerase, alpha subunit SE87_RS06155 IPR006592 RNA polymerase, N-terminal SE87_RS06155 IPR007066 RNA polymerase Rpb1, domain 3 SE87_RS06155 IPR007080 RNA polymerase Rpb1, domain 1 SE87_RS06155 IPR007081 RNA polymerase Rpb1, domain 5 SE87_RS06155 IPR007083 RNA polymerase Rpb1, domain 4 SE87_RS06155 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 SE87_RS06155 IPR007121 RNA polymerase, beta subunit, conserved site SE87_RS06155 IPR007641 RNA polymerase Rpb2, domain 7 SE87_RS06155 IPR007642 RNA polymerase Rpb2, domain 2 SE87_RS06155 IPR007644 RNA polymerase, beta subunit, protrusion SE87_RS06155 IPR007645 RNA polymerase Rpb2, domain 3 SE87_RS06155 IPR010243 DNA-directed RNA polymerase, beta subunit SE87_RS06155 IPR012754 DNA-directed RNA polymerase, subunit beta-prime SE87_RS06155 IPR014724 RNA polymerase Rpb2, OB-fold SE87_RS06155 IPR015712 DNA-directed RNA polymerase, subunit 2 SE87_RS06155 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain SE87_RS06165 IPR000206 Ribosomal protein L7/L12 SE87_RS06165 IPR008932 Ribosomal protein L7/L12, oligomerisation SE87_RS06165 IPR013823 Ribosomal protein L7/L12, C-terminal SE87_RS06165 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SE87_RS06170 IPR001790 Ribosomal protein L10/acidic P0 SE87_RS06170 IPR002363 Ribosomal protein L10, eubacterial, conserved site SE87_RS06170 IPR022973 Ribosomal protein L10 SE87_RS06175 IPR002143 Ribosomal protein L1 SE87_RS06175 IPR005878 Ribosomal protein L1, bacterial-type SE87_RS06175 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich SE87_RS06175 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich SE87_RS06175 IPR023673 Ribosomal protein L1, conserved site SE87_RS06175 IPR023674 Ribosomal protein L1-like SE87_RS06175 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein SE87_RS06180 IPR000911 Ribosomal protein L11/L12 SE87_RS06180 IPR006519 Ribosomal protein L11, bacterial-type SE87_RS06180 IPR020783 Ribosomal protein L11, C-terminal SE87_RS06180 IPR020784 Ribosomal protein L11, N-terminal SE87_RS06180 IPR020785 Ribosomal protein L11, conserved site SE87_RS06185 IPR001062 Transcription antitermination protein, NusG SE87_RS06185 IPR005824 KOW SE87_RS06185 IPR006645 NusG, N-terminal SE87_RS06185 IPR008991 Translation protein SH3-like domain SE87_RS06185 IPR014722 Ribosomal protein L2 domain 2 SE87_RS06185 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site SE87_RS06190 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit SE87_RS06190 IPR005807 SecE subunit of protein translocation complex SE87_RS06200 IPR001705 Ribosomal protein L33 SE87_RS06200 IPR011332 Zinc-binding ribosomal protein SE87_RS06200 IPR018264 Ribosomal protein L33, conserved site SE87_RS06205 IPR000795 Elongation factor, GTP-binding domain SE87_RS06205 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal SE87_RS06205 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 SE87_RS06205 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle SE87_RS06205 IPR005225 Small GTP-binding protein domain SE87_RS06205 IPR009000 Translation protein, beta-barrel domain SE87_RS06205 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal SE87_RS06205 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS06205 IPR031157 SE87_RS06205 SE87_RS06230 IPR003439 ABC transporter-like SE87_RS06230 IPR003593 AAA+ ATPase domain SE87_RS06230 IPR011527 ABC transporter type 1, transmembrane domain SE87_RS06230 IPR017871 ABC transporter, conserved site SE87_RS06230 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS06235 IPR023214 HAD-like domain SE87_RS06240 IPR002052 DNA methylase, N-6 adenine-specific, conserved site SE87_RS06240 IPR012327 D12 class N6 adenine-specific DNA methyltransferase SE87_RS06240 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS06245 IPR003615 HNH nuclease SE87_RS06245 IPR007979 Type II restriction enzyme NlaIII/ICEA1 SE87_RS06250 IPR001451 Bacterial transferase hexapeptide repeat SE87_RS06250 IPR005881 Serine O-acetyltransferase SE87_RS06250 IPR011004 Trimeric LpxA-like SE87_RS06250 IPR018357 Hexapeptide transferase, conserved site SE87_RS06265 IPR000454 ATPase, F0 complex, subunit C SE87_RS06265 IPR002379 V-ATPase proteolipid subunit C-like domain SE87_RS06265 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site SE87_RS06270 IPR001247 Exoribonuclease, phosphorolytic domain 1 SE87_RS06270 IPR003029 Ribosomal protein S1, RNA-binding domain SE87_RS06270 IPR004087 K Homology domain SE87_RS06270 IPR004088 K Homology domain, type 1 SE87_RS06270 IPR012162 Polyribonucleotide nucleotidyltransferase SE87_RS06270 IPR012340 Nucleic acid-binding, OB-fold SE87_RS06270 IPR015847 Exoribonuclease, phosphorolytic domain 2 SE87_RS06270 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain SE87_RS06270 IPR020568 Ribosomal protein S5 domain 2-type fold SE87_RS06270 IPR022967 RNA-binding domain, S1 SE87_RS06270 IPR027408 PNPase/RNase PH domain SE87_RS06275 IPR029057 Phosphoribosyltransferase-like SE87_RS06280 IPR007543 Organic solvent tolerance protein, C-terminal SE87_RS06280 IPR020889 Lipopolysaccharide assembly, LptD SE87_RS06285 IPR010432 RDD SE87_RS06290 IPR000115 Phosphoribosylglycinamide synthetase SE87_RS06290 IPR011054 Rudiment single hybrid motif SE87_RS06290 IPR013815 ATP-grasp fold, subdomain 1 SE87_RS06290 IPR013816 ATP-grasp fold, subdomain 2 SE87_RS06290 IPR016185 Pre-ATP-grasp domain SE87_RS06290 IPR020560 Phosphoribosylglycinamide synthetase, C-domain SE87_RS06290 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SE87_RS06290 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal SE87_RS06300 IPR003439 ABC transporter-like SE87_RS06300 IPR003593 AAA+ ATPase domain SE87_RS06300 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS06305 IPR001441 Decaprenyl diphosphate synthase-like SE87_RS06305 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site SE87_RS06310 IPR004113 FAD-linked oxidase, C-terminal SE87_RS06310 IPR006094 FAD linked oxidase, N-terminal SE87_RS06310 IPR009051 Alpha-helical ferredoxin SE87_RS06310 IPR016164 FAD-linked oxidase-like, C-terminal SE87_RS06310 IPR016166 FAD-binding, type 2 SE87_RS06310 IPR016167 FAD-binding, type 2, subdomain 1 SE87_RS06310 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 SE87_RS06310 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SE87_RS06310 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SE87_RS06315 IPR001763 Rhodanese-like domain SE87_RS06320 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase SE87_RS06325 IPR003691 Putative fluoride ion transporter CrcB SE87_RS06330 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related SE87_RS06330 IPR006638 Elongator protein 3/MiaB/NifB SE87_RS06330 IPR007197 Radical SAM SE87_RS06330 IPR023404 Radical SAM, alpha/beta horseshoe SE87_RS06335 IPR008168 Cytochrome c, class IC SE87_RS06335 IPR009056 Cytochrome c-like domain SE87_RS06340 IPR000086 NUDIX hydrolase domain SE87_RS06340 IPR015797 NUDIX hydrolase domain-like SE87_RS06340 IPR020084 NUDIX hydrolase, conserved site SE87_RS06340 IPR020476 NUDIX hydrolase SE87_RS06340 IPR022927 RNA pyrophosphohydrolase RppH SE87_RS06345 IPR001048 Aspartate/glutamate/uridylate kinase SE87_RS06345 IPR001341 Aspartate kinase domain SE87_RS06345 IPR002912 ACT domain SE87_RS06345 IPR005260 Aspartate kinase, monofunctional class SE87_RS06345 IPR018042 Aspartate kinase, conserved site SE87_RS06345 IPR027795 GATS-like ACT domain SE87_RS06350 IPR021011 DNA replication regulator, HobA SE87_RS06355 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS06360 IPR000489 Pterin-binding SE87_RS06360 IPR006390 Dihydropteroate synthase SE87_RS06360 IPR011005 Dihydropteroate synthase-like SE87_RS06360 IPR016227 Dihydropteroate synthase, predicted SE87_RS06370 IPR000620 Drug/metabolite transporter SE87_RS06380 IPR007463 Protein of unknown function DUF507 SE87_RS06385 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain SE87_RS06385 IPR006274 Carbamoyl-phosphate synthase, small subunit SE87_RS06385 IPR017926 Glutamine amidotransferase SE87_RS06385 IPR029062 Class I glutamine amidotransferase-like SE87_RS06390 IPR003010 Carbon-nitrogen hydrolase SE87_RS06390 IPR022843 Formamidase SE87_RS06400 IPR003697 Maf-like protein SE87_RS06400 IPR029001 Inosine triphosphate pyrophosphatase-like SE87_RS06405 IPR002318 Alanine-tRNA ligase, class IIc SE87_RS06405 IPR003156 DHHA1 domain SE87_RS06405 IPR009000 Translation protein, beta-barrel domain SE87_RS06405 IPR012947 Threonyl/alanyl tRNA synthetase, SAD SE87_RS06405 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain SE87_RS06405 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain SE87_RS06405 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal SE87_RS06405 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria SE87_RS06410 IPR007420 Protein of unknown function DUF465 SE87_RS06420 IPR002718 Outer membrane protein, Helicobacter SE87_RS06425 IPR001648 Ribosomal protein S18 SE87_RS06425 IPR018275 Ribosomal protein S18, conserved site SE87_RS06430 IPR000424 Primosome PriB/single-strand DNA-binding SE87_RS06430 IPR011344 Single-stranded DNA-binding protein SE87_RS06430 IPR012340 Nucleic acid-binding, OB-fold SE87_RS06435 IPR000529 Ribosomal protein S6 SE87_RS06435 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 SE87_RS06435 IPR020814 Ribosomal protein S6, plastid/chloroplast SE87_RS06435 IPR020815 Ribosomal protein S6, conserved site SE87_RS06440 IPR010372 DNA polymerase III, delta SE87_RS06440 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS06445 IPR011805 Ribonuclease R SE87_RS06445 IPR012340 Nucleic acid-binding, OB-fold SE87_RS06445 IPR022966 Ribonuclease II/R, conserved site SE87_RS06450 IPR011342 Shikimate dehydrogenase SE87_RS06450 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal SE87_RS06450 IPR016040 NAD(P)-binding domain SE87_RS06450 IPR022893 Shikimate, quinate/shikimate dehydrogenase SE87_RS06455 IPR003646 SH3-like domain, bacterial-type SE87_RS06460 IPR000515 MetI-like domain SE87_RS06465 IPR000914 Bacterial extracellular solute-binding protein, family 5 SE87_RS06465 IPR030678 SE87_RS06465 SE87_RS06470 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site SE87_RS06470 IPR002305 Aminoacyl-tRNA synthetase, class Ic SE87_RS06470 IPR002306 Tryptophan-tRNA ligase SE87_RS06470 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SE87_RS06470 IPR024109 Tryptophan-tRNA ligase, bacterial-type SE87_RS06475 IPR013216 Methyltransferase type 11 SE87_RS06475 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS06480 IPR004692 Preprotein translocase SecG subunit SE87_RS06485 IPR002661 Ribosome recycling factor SE87_RS06485 IPR023584 Ribosome recycling factor domain SE87_RS06490 IPR000836 Phosphoribosyltransferase domain SE87_RS06490 IPR006273 Orotate phosphoribosyltransferase, bacterial SE87_RS06490 IPR023031 Orotate phosphoribosyltransferase SE87_RS06490 IPR029057 Phosphoribosyltransferase-like SE87_RS06495 IPR010432 RDD SE87_RS06505 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 SE87_RS06510 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit SE87_RS06510 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit SE87_RS06515 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit SE87_RS06515 IPR010218 NADH dehydrogenase, subunit C SE87_RS06515 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site SE87_RS06520 IPR001135 NADH-quinone oxidoreductase, subunit D SE87_RS06520 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H SE87_RS06520 IPR029014 NiFe hydrogenase-like SE87_RS06525 IPR032424 SE87_RS06525 SE87_RS06535 IPR001041 2Fe-2S ferredoxin-type domain SE87_RS06535 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain SE87_RS06535 IPR012675 Beta-grasp domain SE87_RS06535 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SE87_RS06535 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding SE87_RS06540 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H SE87_RS06540 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site SE87_RS06545 IPR009051 Alpha-helical ferredoxin SE87_RS06545 IPR010226 NADH-quinone oxidoreductase, chain I SE87_RS06545 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SE87_RS06545 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SE87_RS06550 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 SE87_RS06555 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K SE87_RS06560 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal SE87_RS06560 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase SE87_RS06560 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 SE87_RS06560 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup SE87_RS06565 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase SE87_RS06565 IPR003918 NADH:ubiquinone oxidoreductase SE87_RS06565 IPR010227 NADH-quinone oxidoreductase, chain M/4 SE87_RS06570 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase SE87_RS06570 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 SE87_RS06575 IPR011990 Tetratricopeptide-like helical domain SE87_RS06575 IPR019734 Tetratricopeptide repeat SE87_RS06580 IPR005841 Alpha-D-phosphohexomutase superfamily SE87_RS06580 IPR005843 Alpha-D-phosphohexomutase, C-terminal SE87_RS06580 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I SE87_RS06580 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II SE87_RS06580 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III SE87_RS06580 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III SE87_RS06580 IPR016066 Alpha-D-phosphohexomutase, conserved site SE87_RS06590 IPR002028 Tryptophan synthase, alpha chain SE87_RS06590 IPR011060 Ribulose-phosphate binding barrel SE87_RS06590 IPR013785 Aldolase-type TIM barrel SE87_RS06590 IPR018204 Tryptophan synthase, alpha chain, active site SE87_RS06595 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SE87_RS06595 IPR006653 Tryptophan synthase, beta chain, conserved site SE87_RS06595 IPR006654 Tryptophan synthase, beta chain SE87_RS06595 IPR023026 Tryptophan synthase beta chain/beta chain-like SE87_RS06600 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) like domain SE87_RS06600 IPR001468 Indole-3-glycerol phosphate synthase, conserved site SE87_RS06600 IPR011060 Ribulose-phosphate binding barrel SE87_RS06600 IPR013785 Aldolase-type TIM barrel SE87_RS06600 IPR013798 Indole-3-glycerol phosphate synthase SE87_RS06605 IPR000312 Glycosyl transferase, family 3 SE87_RS06605 IPR005940 Anthranilate phosphoribosyl transferase SE87_RS06605 IPR017459 Glycosyl transferase family 3, N-terminal domain SE87_RS06610 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain SE87_RS06610 IPR017926 Glutamine amidotransferase SE87_RS06610 IPR029062 Class I glutamine amidotransferase-like SE87_RS06615 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial SE87_RS06615 IPR005801 ADC synthase SE87_RS06615 IPR006805 Anthranilate synthase component I, N-terminal SE87_RS06615 IPR015890 Chorismate binding, C-terminal SE87_RS06615 IPR019999 Anthranilate synthase component I - like SE87_RS06620 IPR002201 Glycosyl transferase, family 9 SE87_RS06625 IPR002201 Glycosyl transferase, family 9 SE87_RS06630 IPR005519 Acid phosphatase (Class B) SE87_RS06630 IPR006423 5-nucleotidase lipoprotein e(P4) SE87_RS06630 IPR023214 HAD-like domain SE87_RS06635 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SE87_RS06640 IPR004305 Thiaminase-2/PQQC SE87_RS06640 IPR016084 Haem oxygenase-like, multi-helical SE87_RS06640 IPR027574 Thiaminase II SE87_RS06655 IPR006419 Nicotinamide mononucleotide transporter PnuC SE87_RS06660 IPR006282 Thiamin pyrophosphokinase SE87_RS06660 IPR007371 Thiamin pyrophosphokinase, catalytic domain SE87_RS06665 IPR000456 Ribosomal protein L17 SE87_RS06670 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain SE87_RS06670 IPR011260 RNA polymerase, alpha subunit, C-terminal SE87_RS06670 IPR011262 DNA-directed RNA polymerase, insert domain SE87_RS06670 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type SE87_RS06670 IPR011773 DNA-directed RNA polymerase, alpha subunit SE87_RS06675 IPR001912 Ribosomal protein S4/S9, N-terminal SE87_RS06675 IPR002942 RNA-binding S4 domain SE87_RS06675 IPR005709 Ribosomal protein S4, bacterial-type SE87_RS06675 IPR018079 Ribosomal protein S4, conserved site SE87_RS06675 IPR022801 Ribosomal protein S4/S9 SE87_RS06680 IPR001971 Ribosomal protein S11 SE87_RS06680 IPR018102 Ribosomal S11, conserved site SE87_RS06680 IPR019981 Ribosomal protein S11, bacterial-type SE87_RS06685 IPR001892 Ribosomal protein S13 SE87_RS06685 IPR010979 Ribosomal protein S13-like, H2TH SE87_RS06685 IPR018269 Ribosomal protein S13, conserved site SE87_RS06685 IPR019980 Ribosomal protein S13, bacterial-type SE87_RS06685 IPR027437 30s ribosomal protein S13, C-terminal SE87_RS06690 IPR000473 Ribosomal protein L36 SE87_RS06695 IPR004368 Translation initiation factor IF-1 SE87_RS06695 IPR006196 RNA-binding domain, S1, IF1 type SE87_RS06695 IPR012340 Nucleic acid-binding, OB-fold SE87_RS06695 IPR022967 RNA-binding domain, S1 SE87_RS06700 IPR000994 Peptidase M24, structural domain SE87_RS06700 IPR001714 Peptidase M24, methionine aminopeptidase SE87_RS06700 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 SE87_RS06705 IPR002208 SecY/SEC61-alpha family SE87_RS06705 IPR023201 SecY subunit domain SE87_RS06705 IPR026593 Protein translocase subunit SecY SE87_RS06705 IPR030659 SE87_RS06705 SE87_RS06710 IPR005749 Ribosomal protein L15, bacterial-type SE87_RS06710 IPR021131 Ribosomal protein L18e/L15P SE87_RS06710 IPR030878 SE87_RS06710 SE87_RS06715 IPR000851 Ribosomal protein S5 SE87_RS06715 IPR005324 Ribosomal protein S5, C-terminal SE87_RS06715 IPR005712 Ribosomal protein S5, bacterial-type SE87_RS06715 IPR013810 Ribosomal protein S5, N-terminal SE87_RS06715 IPR014720 Double-stranded RNA-binding domain SE87_RS06715 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SE87_RS06715 IPR018192 Ribosomal protein S5, N-terminal, conserved site SE87_RS06715 IPR020568 Ribosomal protein S5 domain 2-type fold SE87_RS06720 IPR004389 Ribosomal protein L18, bacterial-type SE87_RS06720 IPR005484 Ribosomal protein L18/L5 SE87_RS06725 IPR000702 Ribosomal protein L6 SE87_RS06725 IPR002358 Ribosomal protein L6, conserved site SE87_RS06725 IPR019906 Ribosomal protein L6, bacterial-type SE87_RS06725 IPR020040 Ribosomal protein L6, alpha-beta domain SE87_RS06730 IPR000630 Ribosomal protein S8 SE87_RS06735 IPR001209 Ribosomal protein S14 SE87_RS06735 IPR018271 Ribosomal protein S14, conserved site SE87_RS06735 IPR023053 Ribosomal protein S14, type Z SE87_RS06740 IPR002132 Ribosomal protein L5 SE87_RS06740 IPR020929 Ribosomal protein L5, conserved site SE87_RS06740 IPR020930 Ribosomal protein L5, bacterial-type SE87_RS06740 IPR022803 Ribosomal protein L5 domain SE87_RS06740 IPR031309 SE87_RS06740 SE87_RS06740 IPR031310 SE87_RS06740 SE87_RS06745 IPR003256 Ribosomal protein L24 SE87_RS06745 IPR005824 KOW SE87_RS06745 IPR005825 Ribosomal protein L24/L26, conserved site SE87_RS06745 IPR008991 Translation protein SH3-like domain SE87_RS06745 IPR014722 Ribosomal protein L2 domain 2 SE87_RS06750 IPR000218 Ribosomal protein L14b/L23e SE87_RS06750 IPR005745 Ribosomal protein L14, bacterial-type SE87_RS06750 IPR019972 Ribosomal protein L14 conserved site SE87_RS06755 IPR000266 Ribosomal protein S17 SE87_RS06755 IPR012340 Nucleic acid-binding, OB-fold SE87_RS06755 IPR019979 Ribosomal protein S17, conserved site SE87_RS06755 IPR019984 Ribosomal protein S17, bacterial-type SE87_RS06760 IPR001854 Ribosomal protein L29 SE87_RS06760 IPR018254 Ribosomal protein L29, conserved site SE87_RS06765 IPR000114 Ribosomal protein L16 SE87_RS06765 IPR016180 Ribosomal protein L10e/L16 SE87_RS06765 IPR020798 Ribosomal protein L16, conserved site SE87_RS06770 IPR001351 Ribosomal protein S3, C-terminal SE87_RS06770 IPR004044 K Homology domain, type 2 SE87_RS06770 IPR004087 K Homology domain SE87_RS06770 IPR005704 Ribosomal protein S3, bacterial SE87_RS06770 IPR009019 K homology domain, prokaryotic type SE87_RS06770 IPR015946 K homology domain-like, alpha/beta SE87_RS06770 IPR018280 Ribosomal protein S3, conserved site SE87_RS06775 IPR001063 Ribosomal protein L22/L17 SE87_RS06775 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type SE87_RS06775 IPR018260 Ribosomal protein L22/L17, conserved site SE87_RS06780 IPR002222 Ribosomal protein S19/S15 SE87_RS06780 IPR005732 Ribosomal protein S19, bacterial-type SE87_RS06780 IPR020934 Ribosomal protein S19 conserved site SE87_RS06780 IPR023575 Ribosomal protein S19, superfamily SE87_RS06785 IPR002171 Ribosomal protein L2 SE87_RS06785 IPR005880 Ribosomal protein L2, bacterial/organellar-type SE87_RS06785 IPR008991 Translation protein SH3-like domain SE87_RS06785 IPR012340 Nucleic acid-binding, OB-fold SE87_RS06785 IPR014722 Ribosomal protein L2 domain 2 SE87_RS06785 IPR014726 Ribosomal protein L2, domain 3 SE87_RS06785 IPR022666 Ribosomal Proteins L2, RNA binding domain SE87_RS06785 IPR022669 Ribosomal protein L2, C-terminal SE87_RS06785 IPR022671 Ribosomal protein L2, conserved site SE87_RS06790 IPR012677 Nucleotide-binding, alpha-beta plait SE87_RS06790 IPR012678 Ribosomal protein L23/L15e core domain SE87_RS06790 IPR013025 Ribosomal protein L25/L23 SE87_RS06795 IPR002136 Ribosomal protein L4/L1e SE87_RS06795 IPR013005 Ribosomal protein L4/L1e, bacterial-type SE87_RS06795 IPR023574 Ribosomal protein L4 domain SE87_RS06800 IPR000597 Ribosomal protein L3 SE87_RS06800 IPR009000 Translation protein, beta-barrel domain SE87_RS06800 IPR019927 Ribosomal protein L3, bacterial/organelle-type SE87_RS06805 IPR001848 Ribosomal protein S10 SE87_RS06805 IPR018268 Ribosomal protein S10, conserved site SE87_RS06805 IPR027486 Ribosomal protein S10 domain SE87_RS06810 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS06820 IPR001352 Ribonuclease HII/HIII SE87_RS06820 IPR012337 Ribonuclease H-like domain SE87_RS06820 IPR022898 Ribonuclease HII SE87_RS06820 IPR024567 Ribonuclease HII/HIII domain SE87_RS06830 IPR000362 Fumarate lyase family SE87_RS06830 IPR005677 Fumarate hydratase, class II SE87_RS06830 IPR008948 L-Aspartase-like SE87_RS06830 IPR018951 Fumarase C, C-terminal SE87_RS06830 IPR020557 Fumarate lyase, conserved site SE87_RS06830 IPR022761 Fumarate lyase, N-terminal SE87_RS06830 IPR024083 Fumarase/histidase, N-terminal SE87_RS06835 IPR032693 SE87_RS06835 SE87_RS06840 IPR003423 Outer membrane efflux protein SE87_RS06845 IPR032317 SE87_RS06845 SE87_RS06850 IPR001036 Acriflavin resistance protein SE87_RS06850 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA SE87_RS06850 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SE87_RS06855 IPR008407 Branched-chain amino acid transport, AzlD SE87_RS06860 IPR004471 Branched-chain amino acid transport, AzlC SE87_RS06860 IPR011606 Branched-chain amino acid transport, permease SE87_RS06865 IPR001305 Heat shock protein DnaJ, cysteine-rich domain SE87_RS06865 IPR001623 DnaJ domain SE87_RS06865 IPR002939 Chaperone DnaJ, C-terminal SE87_RS06865 IPR008971 HSP40/DnaJ peptide-binding SE87_RS06865 IPR012724 Chaperone DnaJ SE87_RS06875 IPR021139 NYN domain, limkain-b1-type SE87_RS06875 IPR029060 PIN domain-like SE87_RS06880 IPR004506 tRNA-specific 2-thiouridylase SE87_RS06880 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SE87_RS06880 IPR023382 Adenine nucleotide alpha hydrolase-like domains SE87_RS06885 IPR001623 DnaJ domain SE87_RS06890 IPR004821 Cytidyltransferase-like domain SE87_RS06890 IPR005248 Probable nicotinate-nucleotide adenylyltransferase SE87_RS06890 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SE87_RS06895 IPR002145 Ribbon-helix-helix protein, copG SE87_RS06895 IPR010985 Ribbon-helix-helix SE87_RS06895 IPR013321 Arc-type ribbon-helix-helix SE87_RS06895 IPR014864 Transcription factor, NikR, nickel binding C-terminal SE87_RS06895 IPR022988 Nickel-responsive transcriptional regulator NikR SE87_RS06900 IPR002898 MotA/TolQ/ExbB proton channel SE87_RS06900 IPR014172 TonB-system energizer ExbB type-2 SE87_RS06905 IPR003400 Biopolymer transport protein ExbD/TolR SE87_RS06905 IPR014171 TonB system transport protein ExbD type-2 SE87_RS06910 IPR003538 Gram-negative bacterial TonB protein SE87_RS06910 IPR006260 TonB, C-terminal SE87_RS06915 IPR002718 Outer membrane protein, Helicobacter SE87_RS06920 IPR005496 Integral membrane protein TerC SE87_RS06925 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB SE87_RS06925 IPR004488 Magnesium/cobalt transport protein CorA SE87_RS06930 IPR001576 Phosphoglycerate kinase SE87_RS06930 IPR015824 Phosphoglycerate kinase, N-terminal SE87_RS06930 IPR015901 Phosphoglycerate kinase, C-terminal SE87_RS06930 IPR015911 Phosphoglycerate kinase, conserved site SE87_RS06935 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I SE87_RS06935 IPR016040 NAD(P)-binding domain SE87_RS06935 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain SE87_RS06935 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain SE87_RS06935 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family SE87_RS06940 IPR002043 Uracil-DNA glycosylase SE87_RS06940 IPR005122 Uracil-DNA glycosylase-like SE87_RS06940 IPR018085 Uracil-DNA glycosylase, active site SE87_RS06945 IPR002123 Phospholipid/glycerol acyltransferase SE87_RS06945 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase SE87_RS06955 IPR001478 PDZ domain SE87_RS06955 IPR004447 C-terminal-processing peptidase S41A SE87_RS06955 IPR005151 Tail specific protease SE87_RS06955 IPR029045 ClpP/crotonase-like domain SE87_RS06960 IPR011335 Restriction endonuclease type II-like SE87_RS06960 IPR011856 tRNA endonuclease-like domain SE87_RS06965 IPR001091 Restriction/modification DNA-methylase SE87_RS06965 IPR002052 DNA methylase, N-6 adenine-specific, conserved site SE87_RS06965 IPR002941 DNA methylase N-4/N-6 SE87_RS06965 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS06980 IPR003356 DNA methylase, adenine-specific SE87_RS06980 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS06985 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal SE87_RS06985 IPR004393 Nicotinate-nucleotide pyrophosphorylase SE87_RS06985 IPR013785 Aldolase-type TIM barrel SE87_RS06985 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal SE87_RS06985 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD SE87_RS06990 IPR003473 Quinolinate synthetase A SE87_RS06990 IPR023515 Quinolinate synthase A, type 3 SE87_RS06995 IPR003817 Phosphatidylserine decarboxylase-related SE87_RS06995 IPR033177 SE87_RS06995 SE87_RS06995 IPR033178 SE87_RS06995 SE87_RS07000 IPR009057 Homeodomain-like SE87_RS07010 IPR000537 UbiA prenyltransferase family SE87_RS07010 IPR006371 4-hydroxybenzoate polyprenyltransferase-related SE87_RS07015 IPR004477 ComEC/Rec2-related protein SE87_RS07020 IPR007692 DNA helicase, DnaB type SE87_RS07020 IPR007693 DNA helicase, DnaB-like, N-terminal SE87_RS07020 IPR007694 DNA helicase, DnaB-like, C-terminal SE87_RS07020 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal SE87_RS07020 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS07025 IPR000631 YjeF C-terminal domain SE87_RS07025 IPR004443 YjeF N-terminal domain SE87_RS07025 IPR017953 Carbohydrate kinase, predicted, conserved site SE87_RS07025 IPR029056 Ribokinase-like SE87_RS07025 IPR030677 SE87_RS07025 SE87_RS07030 IPR003594 Histidine kinase-like ATPase, C-terminal domain SE87_RS07030 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain SE87_RS07035 IPR001789 Signal transduction response regulator, receiver domain SE87_RS07035 IPR001867 Signal transduction response regulator, C-terminal SE87_RS07035 IPR011006 CheY-like superfamily SE87_RS07035 IPR011991 Winged helix-turn-helix DNA-binding domain SE87_RS07035 IPR016032 Signal transduction response regulator, C-terminal effector SE87_RS07045 IPR001091 Restriction/modification DNA-methylase SE87_RS07045 IPR002052 DNA methylase, N-6 adenine-specific, conserved site SE87_RS07045 IPR002941 DNA methylase N-4/N-6 SE87_RS07045 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS07050 IPR001091 Restriction/modification DNA-methylase SE87_RS07050 IPR002941 DNA methylase N-4/N-6 SE87_RS07050 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site SE87_RS07050 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS07060 IPR006935 Helicase/UvrB domain SE87_RS07060 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS07065 IPR007221 Rod shape-determining protein MreC SE87_RS07070 IPR004753 Cell shape determining protein MreB/Mrl SE87_RS07075 IPR003593 AAA+ ATPase domain SE87_RS07075 IPR003959 ATPase, AAA-type, core SE87_RS07075 IPR004487 Clp protease, ATP-binding subunit ClpX SE87_RS07075 IPR010603 Zinc finger, ClpX C4-type SE87_RS07075 IPR019489 Clp ATPase, C-terminal SE87_RS07075 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS07080 IPR001451 Bacterial transferase hexapeptide repeat SE87_RS07080 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase SE87_RS07080 IPR011004 Trimeric LpxA-like SE87_RS07080 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal SE87_RS07085 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ SE87_RS07085 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ SE87_RS07085 IPR029069 HotDog domain SE87_RS07090 IPR003775 Flagellar assembly factor FliW SE87_RS07090 IPR024046 Flagellar assembly factor FliW domain SE87_RS07095 IPR017689 Outer membrane protein assembly factor BamD SE87_RS07100 IPR003111 Peptidase S16, lon N-terminal SE87_RS07100 IPR003593 AAA+ ATPase domain SE87_RS07100 IPR003959 ATPase, AAA-type, core SE87_RS07100 IPR004815 Lon protease, bacterial/eukaryotic-type SE87_RS07100 IPR008268 Peptidase S16, active site SE87_RS07100 IPR008269 Peptidase S16, Lon C-terminal SE87_RS07100 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SE87_RS07100 IPR015947 PUA-like domain SE87_RS07100 IPR020568 Ribosomal protein S5 domain 2-type fold SE87_RS07100 IPR027065 Lon protease SE87_RS07100 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS07100 IPR027543 Lon protease, bacterial SE87_RS07105 IPR003099 Prephenate dehydrogenase SE87_RS07105 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like SE87_RS07105 IPR016040 NAD(P)-binding domain SE87_RS07115 IPR001604 DNA/RNA non-specific endonuclease SE87_RS07115 IPR020821 Extracellular Endonuclease, subunit A SE87_RS07120 IPR000055 Restriction endonuclease, type I, HsdS SE87_RS07130 IPR000146 Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase SE87_RS07130 IPR023079 Sedoheptulose-1,7-bisphosphatase SE87_RS07130 IPR028343 Fructose-1,6-bisphosphatase SE87_RS07130 IPR033391 SE87_RS07130 SE87_RS07135 IPR000056 Ribulose-phosphate 3-epimerase-like SE87_RS07135 IPR011060 Ribulose-phosphate binding barrel SE87_RS07135 IPR013785 Aldolase-type TIM barrel SE87_RS07135 IPR026019 Ribulose-phosphate 3-epimerase SE87_RS07140 IPR006054 DNA polymerase III, epsilon subunit SE87_RS07140 IPR012337 Ribonuclease H-like domain SE87_RS07140 IPR013520 Exonuclease, RNase T/DNA polymerase III SE87_RS07170 IPR008532 Domain of unknown function DUF814 SE87_RS07175 IPR003395 RecF/RecN/SMC, N-terminal SE87_RS07175 IPR003593 AAA+ ATPase domain SE87_RS07175 IPR004604 DNA recombination/repair protein RecN SE87_RS07175 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS07180 IPR002504 Inorganic polyphosphate/ATP-NAD kinase SE87_RS07180 IPR016064 ATP-NAD kinase-like domain SE87_RS07180 IPR017437 ATP-NAD kinase, PpnK-type, all-beta SE87_RS07180 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 SE87_RS07185 IPR002718 Outer membrane protein, Helicobacter SE87_RS07195 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain SE87_RS07195 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal SE87_RS07195 IPR016040 NAD(P)-binding domain SE87_RS07200 IPR006035 Ureohydrolase SE87_RS07200 IPR014033 Arginase SE87_RS07200 IPR023696 Ureohydrolase domain SE87_RS07205 IPR000531 TonB-dependent receptor, beta-barrel SE87_RS07205 IPR012910 TonB-dependent receptor, plug SE87_RS07210 IPR002725 Protein of unknown function DUF45 SE87_RS07215 IPR004473 Restriction endonuclease, type I, HsdR SE87_RS07215 IPR006935 Helicase/UvrB domain SE87_RS07215 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal SE87_RS07215 IPR014001 Helicase, superfamily 1/2, ATP-binding domain SE87_RS07215 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS07220 IPR002052 DNA methylase, N-6 adenine-specific, conserved site SE87_RS07220 IPR003356 DNA methylase, adenine-specific SE87_RS07220 IPR004546 Restriction endonuclease, type I, HsdM SE87_RS07220 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain SE87_RS07220 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS07235 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB SE87_RS07235 IPR006638 Elongator protein 3/MiaB/NifB SE87_RS07235 IPR007197 Radical SAM SE87_RS07235 IPR010722 Biotin and thiamin synthesis-associated domain SE87_RS07235 IPR013785 Aldolase-type TIM barrel SE87_RS07235 IPR024177 Biotin synthase SE87_RS07240 IPR017039 Virulence factor BrkB SE87_RS07265 IPR004919 Domain of unknown function DUF262 SE87_RS07265 IPR011089 Domain of unknown function DUF1524 SE87_RS07285 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 SE87_RS07285 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF SE87_RS07290 IPR004394 Protein Iojap/ribosomal silencing factor RsfS SE87_RS07295 IPR018022 tRNA delta(2)-isopentenylpyrophosphate transferase SE87_RS07295 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS07300 IPR002495 Glycosyl transferase, family 8 SE87_RS07300 IPR029044 Nucleotide-diphospho-sugar transferases SE87_RS07305 IPR000917 Sulfatase SE87_RS07310 IPR000917 Sulfatase SE87_RS07310 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha SE87_RS07310 IPR017850 Alkaline-phosphatase-like, core domain SE87_RS07315 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase SE87_RS07315 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal SE87_RS07315 IPR016166 FAD-binding, type 2 SE87_RS07315 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 SE87_RS07320 IPR002191 Bacterial export protein family 3 SE87_RS07320 IPR006305 Flagellar biosynthesis protein FliQ SE87_RS07325 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain SE87_RS07325 IPR003593 AAA+ ATPase domain SE87_RS07325 IPR005714 ATPase, type III secretion system, FliI/YscN SE87_RS07325 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site SE87_RS07325 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS07325 IPR032463 SE87_RS07325 SE87_RS07330 IPR001482 Type II secretion system protein E SE87_RS07330 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS07335 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site SE87_RS07335 IPR002300 Aminoacyl-tRNA synthetase, class Ia SE87_RS07335 IPR002301 Isoleucine-tRNA ligase SE87_RS07335 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain SE87_RS07335 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding SE87_RS07335 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding SE87_RS07335 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SE87_RS07335 IPR023585 Isoleucine-tRNA ligase, type 1 SE87_RS07340 IPR002942 RNA-binding S4 domain SE87_RS07340 IPR025490 RNA-binding protein, HP1423 type SE87_RS07360 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr SE87_RS07360 IPR007197 Radical SAM SE87_RS07360 IPR013785 Aldolase-type TIM barrel SE87_RS07360 IPR027492 Dual-specificity RNA methyltransferase RlmN SE87_RS07365 IPR000644 CBS domain SE87_RS07365 IPR001347 Sugar isomerase (SIS) SE87_RS07365 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type SE87_RS07370 IPR001279 Beta-lactamase-like SE87_RS07370 IPR001587 Ribonuclease J, conserved site SE87_RS07370 IPR004613 Ribonuclease J SE87_RS07370 IPR011108 RNA-metabolising metallo-beta-lactamase SE87_RS07370 IPR030854 SE87_RS07370 SE87_RS07375 IPR001737 Ribosomal RNA adenine methylase transferase SE87_RS07375 IPR011530 Ribosomal RNA adenine dimethylase SE87_RS07375 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site SE87_RS07375 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal SE87_RS07375 IPR023165 rRNA adenine dimethylase-like SE87_RS07375 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS07385 IPR002052 DNA methylase, N-6 adenine-specific, conserved site SE87_RS07385 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS07390 IPR002376 Formyl transferase, N-terminal SE87_RS07390 IPR004810 Formyltetrahydrofolate deformylase SE87_RS07395 IPR002142 Peptidase S49 SE87_RS07395 IPR004635 Peptidase S49, SppA SE87_RS07395 IPR029045 ClpP/crotonase-like domain SE87_RS07405 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain SE87_RS07430 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain SE87_RS07430 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site SE87_RS07430 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase SE87_RS07430 IPR029000 Cyclophilin-like domain SE87_RS07435 IPR003751 Carbon storage regulator SE87_RS07440 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase SE87_RS07440 IPR006204 GHMP kinase N-terminal domain SE87_RS07440 IPR013750 GHMP kinase, C-terminal domain SE87_RS07440 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SE87_RS07440 IPR020568 Ribosomal protein S5 domain 2-type fold SE87_RS07445 IPR000037 SsrA-binding protein SE87_RS07445 IPR020081 SsrA-binding protein, conserved site SE87_RS07445 IPR023620 Small protein B SE87_RS07450 IPR002898 MotA/TolQ/ExbB proton channel SE87_RS07450 IPR014172 TonB-system energizer ExbB type-2 SE87_RS07455 IPR003400 Biopolymer transport protein ExbD/TolR SE87_RS07460 IPR000271 Ribosomal protein L34 SE87_RS07460 IPR020939 Ribosomal protein L34, conserved site SE87_RS07465 IPR000100 Ribonuclease P SE87_RS07465 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SE87_RS07465 IPR020539 Ribonuclease P, conserved site SE87_RS07465 IPR020568 Ribosomal protein S5 domain 2-type fold SE87_RS07470 IPR002696 Putative membrane protein insertion efficiency factor SE87_RS07475 IPR001708 Membrane insertase OXA1/ALB3/YidC SE87_RS07475 IPR019998 Membrane insertase YidC SE87_RS07475 IPR028053 Membrane insertase YidC, N-terminal SE87_RS07475 IPR028055 Membrane insertase YidC/Oxa1, C-terminal SE87_RS07480 IPR032782 SE87_RS07480 SE87_RS07485 IPR004520 tRNA modification GTPase MnmE SE87_RS07485 IPR005225 Small GTP-binding protein domain SE87_RS07485 IPR006073 GTP binding domain SE87_RS07485 IPR018948 GTP-binding protein TrmE, N-terminal SE87_RS07485 IPR025867 tRNA modification GTPase MnmE C-terminal domain SE87_RS07485 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 SE87_RS07485 IPR027368 tRNA modification GTPase MnmE domain 2 SE87_RS07485 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS07490 IPR002718 Outer membrane protein, Helicobacter SE87_RS07500 IPR024952 Lipoprotein LPP20-like SE87_RS07510 IPR002217 Lipoprotein LPP20 SE87_RS07510 IPR024952 Lipoprotein LPP20-like SE87_RS07515 IPR014094 Penicillin-binding protein activator LpoB SE87_RS07520 IPR005746 Thioredoxin SE87_RS07520 IPR012336 Thioredoxin-like fold SE87_RS07520 IPR013766 Thioredoxin domain SE87_RS07525 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F SE87_RS07525 IPR002942 RNA-binding S4 domain SE87_RS07525 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F SE87_RS07525 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site SE87_RS07525 IPR020103 Pseudouridine synthase, catalytic domain SE87_RS07530 IPR003141 Polymerase/histidinol phosphatase, N-terminal SE87_RS07530 IPR004013 PHP, C-terminal SE87_RS07530 IPR004805 DNA polymerase III, alpha subunit SE87_RS07530 IPR011708 Bacterial DNA polymerase III, alpha subunit SE87_RS07530 IPR016195 Polymerase/histidinol phosphatase-like SE87_RS07530 IPR029460 DNA polymerase, helix-hairpin-helix motif SE87_RS07535 IPR004852 Di-haem cytochrome c peroxidase SE87_RS07535 IPR009056 Cytochrome c-like domain SE87_RS07535 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase SE87_RS07540 IPR005184 Domain of unknown function DUF306, Meta/HslJ SE87_RS07545 IPR005586 Protein of unknown function DUF330 SE87_RS07550 IPR003399 Mammalian cell entry-related SE87_RS07555 IPR003439 ABC transporter-like SE87_RS07555 IPR003593 AAA+ ATPase domain SE87_RS07555 IPR017871 ABC transporter, conserved site SE87_RS07555 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS07560 IPR003453 Permease domain SE87_RS07560 IPR030802 SE87_RS07560 SE87_RS07565 IPR002718 Outer membrane protein, Helicobacter SE87_RS07570 IPR001544 Aminotransferase, class IV SE87_RS07570 IPR005786 Branched-chain amino acid aminotransferase II SE87_RS07570 IPR018300 Aminotransferase, class IV, conserved site SE87_RS07575 IPR002718 Outer membrane protein, Helicobacter SE87_RS07580 IPR001098 DNA-directed DNA polymerase, family A, palm domain SE87_RS07580 IPR002298 DNA polymerase A SE87_RS07580 IPR002421 5'-3' exonuclease, N-terminal SE87_RS07580 IPR002562 3'-5' exonuclease domain SE87_RS07580 IPR008918 Helix-hairpin-helix motif, class 2 SE87_RS07580 IPR012337 Ribonuclease H-like domain SE87_RS07580 IPR018320 DNA polymerase 1 SE87_RS07580 IPR019760 DNA-directed DNA polymerase, family A, conserved site SE87_RS07580 IPR020045 5'-3' exonuclease, C-terminal domain SE87_RS07580 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal SE87_RS07580 IPR029060 PIN domain-like SE87_RS07585 IPR000055 Restriction endonuclease, type I, HsdS SE87_RS07590 IPR003356 DNA methylase, adenine-specific SE87_RS07590 IPR014883 VRR-NUC domain SE87_RS07590 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS07595 IPR029057 Phosphoribosyltransferase-like SE87_RS07600 IPR018094 Thymidylate kinase SE87_RS07600 IPR018095 Thymidylate kinase, conserved site SE87_RS07600 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS07605 IPR001980 Coenzyme A biosynthesis protein SE87_RS07605 IPR004821 Cytidyltransferase-like domain SE87_RS07605 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SE87_RS07610 IPR003382 Flavoprotein SE87_RS07610 IPR004507 Decarboxylase UbiX/Pad1 SE87_RS07615 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal SE87_RS07620 IPR000212 DNA helicase, UvrD/REP type SE87_RS07620 IPR014016 UvrD-like Helicase, ATP-binding domain SE87_RS07620 IPR014017 DNA helicase, UvrD-like, C-terminal SE87_RS07620 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS07630 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain SE87_RS07630 IPR002317 Serine-tRNA ligase, type1 SE87_RS07630 IPR010978 tRNA-binding arm SE87_RS07630 IPR015866 Serine-tRNA synthetase, type1, N-terminal SE87_RS07640 IPR003761 Exonuclease VII, small subunit SE87_RS07645 IPR004033 UbiE/COQ5 methyltransferase SE87_RS07645 IPR023576 UbiE/COQ5 methyltransferase, conserved site SE87_RS07645 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS07650 IPR005265 Uncharacterised protein family UPF0093 SE87_RS07650 IPR014351 Conserved hypothetical protein CHP00701 SE87_RS07655 IPR001498 Impact, N-terminal SE87_RS07655 IPR015796 Impact family, bacterial/archaeal SE87_RS07655 IPR020568 Ribosomal protein S5 domain 2-type fold SE87_RS07655 IPR023582 Impact family SE87_RS07670 IPR032317 SE87_RS07670 SE87_RS07675 IPR003423 Outer membrane efflux protein SE87_RS07680 IPR000644 CBS domain SE87_RS07680 IPR002550 Domain of unknown function DUF21 SE87_RS07680 IPR005170 Transporter-associated domain SE87_RS07680 IPR016166 FAD-binding, type 2 SE87_RS07680 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 SE87_RS07685 IPR001204 Phosphate transporter SE87_RS07690 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal SE87_RS07700 IPR004101 Mur ligase, C-terminal SE87_RS07700 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase SE87_RS07700 IPR013221 Mur ligase, central SE87_RS07700 IPR018109 Folylpolyglutamate synthetase, conserved site SE87_RS07705 IPR001585 Transaldolase SE87_RS07705 IPR004732 Transaldolase type 2 SE87_RS07705 IPR013785 Aldolase-type TIM barrel SE87_RS07705 IPR018225 Transaldolase, active site SE87_RS07710 IPR001021 Ribosomal protein L25, long-form SE87_RS07710 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain SE87_RS07710 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain SE87_RS07710 IPR020057 Ribosomal protein L25, beta domain SE87_RS07710 IPR029751 Ribosomal protein L25 SE87_RS07715 IPR001328 Peptidyl-tRNA hydrolase SE87_RS07715 IPR018171 Peptidyl-tRNA hydrolase, conserved site SE87_RS07720 IPR005495 Permease YjgP/YjgQ, predicted SE87_RS07725 IPR001736 Phospholipase D/Transphosphatidylase SE87_RS07725 IPR025202 Phospholipase D-like domain SE87_RS07735 IPR002718 Outer membrane protein, Helicobacter SE87_RS07740 IPR007418 Protein of unknown function DUF474 SE87_RS07745 IPR001757 Cation-transporting P-type ATPase SE87_RS07745 IPR006121 Heavy metal-associated domain, HMA SE87_RS07745 IPR008250 P-type ATPase, A domain SE87_RS07745 IPR018303 P-type ATPase, phosphorylation site SE87_RS07745 IPR021993 Putative metal-binding domain of cation transport ATPase SE87_RS07745 IPR023214 HAD-like domain SE87_RS07745 IPR027256 Cation-transporting P-type ATPase, subfamily IB SE87_RS07750 IPR002052 DNA methylase, N-6 adenine-specific, conserved site SE87_RS07750 IPR007848 Methyltransferase small domain SE87_RS07750 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS07755 IPR002125 CMP/dCMP deaminase, zinc-binding SE87_RS07755 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal SE87_RS07755 IPR016193 Cytidine deaminase-like SE87_RS07755 IPR024072 Dihydrofolate reductase-like domain SE87_RS07760 IPR004445 Sodium/glutamate symporter SE87_RS07765 IPR005097 Saccharopine dehydrogenase / Homospermidine synthase SE87_RS07765 IPR016040 NAD(P)-binding domain SE87_RS07765 IPR032095 SE87_RS07765 SE87_RS07770 IPR013783 Immunoglobulin-like fold SE87_RS07770 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG SE87_RS07770 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SE87_RS07770 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SE87_RS07770 IPR032879 SE87_RS07770 SE87_RS07775 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY SE87_RS07780 IPR006157 Dihydroneopterin aldolase/epimerase domain SE87_RS07790 IPR000531 TonB-dependent receptor, beta-barrel SE87_RS07790 IPR012910 TonB-dependent receptor, plug SE87_RS07795 IPR004534 L-seryl-tRNA selenium transferase SE87_RS07795 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 SE87_RS07795 IPR015424 Pyridoxal phosphate-dependent transferase SE87_RS07795 IPR018319 L-seryl-tRNA selenium transferase-like SE87_RS07800 IPR009019 K homology domain, prokaryotic type SE87_RS07800 IPR010213 Transcription termination factor NusA SE87_RS07800 IPR012340 Nucleic acid-binding, OB-fold SE87_RS07800 IPR013735 Transcription factor NusA, N-terminal SE87_RS07800 IPR015946 K homology domain-like, alpha/beta SE87_RS07800 IPR022967 RNA-binding domain, S1 SE87_RS07800 IPR025249 KH domain, NusA-like SE87_RS07800 IPR030842 SE87_RS07800 SE87_RS07810 IPR002052 DNA methylase, N-6 adenine-specific, conserved site SE87_RS07810 IPR011639 Restriction modification methylase Eco57I SE87_RS07810 IPR025931 TaqI-like C-terminal specificity domain SE87_RS07810 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS07825 IPR006935 Helicase/UvrB domain SE87_RS07825 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS07835 IPR002052 DNA methylase, N-6 adenine-specific, conserved site SE87_RS07835 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class SE87_RS07835 IPR002941 DNA methylase N-4/N-6 SE87_RS07835 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like SE87_RS07840 IPR001650 Helicase, C-terminal SE87_RS07840 IPR006935 Helicase/UvrB domain SE87_RS07840 IPR012340 Nucleic acid-binding, OB-fold SE87_RS07840 IPR014001 Helicase, superfamily 1/2, ATP-binding domain SE87_RS07840 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS07850 IPR002718 Outer membrane protein, Helicobacter SE87_RS07855 IPR004808 AP endonuclease 1 SE87_RS07855 IPR005135 Endonuclease/exonuclease/phosphatase SE87_RS07855 IPR020847 AP endonuclease 1, binding site SE87_RS07855 IPR020848 AP endonuclease 1, conserved site SE87_RS07875 IPR001957 Chromosomal replication control, initiator DnaA SE87_RS07875 IPR003593 AAA+ ATPase domain SE87_RS07875 IPR010921 Trp repressor/replication initiator SE87_RS07875 IPR013159 Chromosomal replication initiator, DnaA C-terminal SE87_RS07875 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) SE87_RS07875 IPR018312 Chromosomal replication control, initiator DnaA, conserved site SE87_RS07875 IPR020591 Chromosomal replication control, initiator DnaA-like SE87_RS07875 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS07880 IPR000845 Nucleoside phosphorylase domain SE87_RS07885 IPR019469 Protein of unknown function DUF2443 SE87_RS07890 IPR001347 Sugar isomerase (SIS) SE87_RS07890 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising SE87_RS07890 IPR029055 Nucleophile aminohydrolases, N-terminal SE87_RS07895 IPR003669 Thymidylate synthase ThyX SE87_RS07900 IPR001959 Transposase, probable, IS891/IS1136/IS1341 SE87_RS07900 IPR010095 Transposase IS605, OrfB, C-terminal SE87_RS07900 IPR021027 Transposase, putative, helix-turn-helix domain SE87_RS07905 IPR002686 Transposase IS200-like SE87_RS07920 IPR009056 Cytochrome c-like domain SE87_RS07925 IPR005798 Cytochrome b/b6, C-terminal SE87_RS07925 IPR016174 Di-haem cytochrome, transmembrane SE87_RS07925 IPR027387 Cytochrome b/b6-like domain SE87_RS07930 IPR014349 Rieske iron-sulphur protein SE87_RS07930 IPR017941 Rieske [2Fe-2S] iron-sulphur domain SE87_RS07935 IPR001650 Helicase, C-terminal SE87_RS07935 IPR003711 CarD-like/TRCF domain SE87_RS07935 IPR004576 Transcription-repair coupling factor SE87_RS07935 IPR005118 Transcription-repair-coupling factor, C-terminal domain SE87_RS07935 IPR011545 DEAD/DEAH box helicase domain SE87_RS07935 IPR014001 Helicase, superfamily 1/2, ATP-binding domain SE87_RS07935 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS07940 IPR007607 Protein of unknown function DUF583 SE87_RS07945 IPR011055 Duplicated hybrid motif SE87_RS07945 IPR016047 Peptidase M23 SE87_RS07950 IPR011055 Duplicated hybrid motif SE87_RS07950 IPR016047 Peptidase M23 SE87_RS07955 IPR001645 Folylpolyglutamate synthetase SE87_RS07955 IPR004101 Mur ligase, C-terminal SE87_RS07955 IPR013221 Mur ligase, central SE87_RS07960 IPR007485 Lipopolysaccharide assembly, LptE SE87_RS07965 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site SE87_RS07965 IPR002300 Aminoacyl-tRNA synthetase, class Ia SE87_RS07965 IPR002302 Leucine-tRNA ligase SE87_RS07965 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain SE87_RS07965 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding SE87_RS07965 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SE87_RS07965 IPR015413 Methionyl/Leucyl tRNA synthetase SE87_RS07965 IPR025709 Leucyl-tRNA synthetase, editing domain SE87_RS07975 IPR005665 Protein-export membrane protein SecF, bacterial SE87_RS07975 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SE87_RS07975 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site SE87_RS07975 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial SE87_RS07980 IPR001036 Acriflavin resistance protein SE87_RS07980 IPR005791 Protein translocase subunit SecD SE87_RS07980 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SE87_RS07980 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial SE87_RS07985 IPR003849 Preprotein translocase YajC SE87_RS07990 IPR004670 Na+/H+ antiporter NhaA SE87_RS07990 IPR023171 Na/H antiporter domain SE87_RS07995 IPR000212 DNA helicase, UvrD/REP type SE87_RS07995 IPR014016 UvrD-like Helicase, ATP-binding domain SE87_RS07995 IPR014017 DNA helicase, UvrD-like, C-terminal SE87_RS07995 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS08000 IPR001865 Ribosomal protein S2 SE87_RS08000 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid SE87_RS08000 IPR018130 Ribosomal protein S2, conserved site SE87_RS08000 IPR023591 Ribosomal protein S2, flavodoxin-like domain SE87_RS08005 IPR001816 Translation elongation factor EFTs/EF1B SE87_RS08005 IPR009060 UBA-like SE87_RS08005 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation SE87_RS08005 IPR018101 Translation elongation factor Ts, conserved site SE87_RS08010 IPR001460 Penicillin-binding protein, transpeptidase SE87_RS08010 IPR005311 Penicillin-binding protein, dimerisation domain SE87_RS08010 IPR012338 Beta-lactamase/transpeptidase-like SE87_RS08015 IPR001624 Flagellar hook-basal body complex protein FliE SE87_RS08020 IPR001444 Flagellar basal body rod protein, N-terminal SE87_RS08020 IPR006299 Flagellar basal-body rod protein FlgC SE87_RS08020 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SE87_RS08020 IPR019776 Flagellar basal body rod protein, conserved site SE87_RS08025 IPR001444 Flagellar basal body rod protein, N-terminal SE87_RS08025 IPR006300 Flagellar basal-body rod protein FlgB SE87_RS08025 IPR019776 Flagellar basal body rod protein, conserved site SE87_RS08030 IPR001182 Cell cycle protein FtsW/RodA SE87_RS08030 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site SE87_RS08035 IPR002491 ABC transporter periplasmic binding domain SE87_RS08040 IPR002491 ABC transporter periplasmic binding domain SE87_RS08045 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant SE87_RS08045 IPR012336 Thioredoxin-like fold SE87_RS08045 IPR019479 Peroxiredoxin, C-terminal SE87_RS08045 IPR024706 Peroxiredoxin, AhpC-type SE87_RS08050 IPR004872 Lipoprotein NlpA family SE87_RS08055 IPR001460 Penicillin-binding protein, transpeptidase SE87_RS08055 IPR005311 Penicillin-binding protein, dimerisation domain SE87_RS08055 IPR012338 Beta-lactamase/transpeptidase-like SE87_RS08055 IPR017790 Penicillin-binding protein 2 SE87_RS08065 IPR006073 GTP binding domain SE87_RS08065 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC SE87_RS08065 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS08070 IPR005653 Organic solvent tolerance-like, N-terminal SE87_RS08070 IPR014340 Lipopolysaccharide assembly, LptA SE87_RS08080 IPR006549 HAD-superfamily hydrolase,subfamily IIIA SE87_RS08080 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase SE87_RS08080 IPR023214 HAD-like domain SE87_RS08085 IPR007730 Sporulation-related domain SE87_RS08085 IPR009009 RlpA-like double-psi beta-barrel domain SE87_RS08085 IPR012997 Rare lipoprotein A, bacterial SE87_RS08090 IPR008258 Lytic transglycosylase-like SLT domain SE87_RS08090 IPR018392 LysM domain SE87_RS08090 IPR023346 Lysozyme-like domain SE87_RS08095 IPR001130 TatD family SE87_RS08095 IPR015991 Uncharacterised deoxyribonuclease TatD-type SE87_RS08095 IPR018228 Deoxyribonuclease, TatD-related, conserved site SE87_RS08095 IPR032466 SE87_RS08095 SE87_RS08100 IPR001783 Lumazine-binding protein SE87_RS08100 IPR017938 Riboflavin synthase-like beta-barrel SE87_RS08100 IPR023366 ATP synthase subunit alpha-like domain SE87_RS08100 IPR026017 Lumazine-binding domain SE87_RS08105 IPR004683 Type III secretion system substrate exporter FlhB-like SE87_RS08105 IPR006135 Type III secretion system substrate exporter SE87_RS08105 IPR029025 Type III secretion system substrate exporter, C-terminal SE87_RS08110 IPR003439 ABC transporter-like SE87_RS08110 IPR003593 AAA+ ATPase domain SE87_RS08110 IPR017871 ABC transporter, conserved site SE87_RS08110 IPR018449 NIL domain SE87_RS08110 IPR026253 Methionine import ATP-binding protein MetN SE87_RS08110 IPR027417 P-loop containing nucleoside triphosphate hydrolase SE87_RS08115 IPR000515 MetI-like domain SE87_RS08120 IPR002495 Glycosyl transferase, family 8 SE87_RS08120 IPR029044 Nucleotide-diphospho-sugar transferases SE87_RS08130 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SE87_RS08135 IPR000715 Glycosyl transferase, family 4 SE87_RS08140 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ SE87_RS08140 IPR013785 Aldolase-type TIM barrel SE87_RS08145 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA SE87_RS08145 IPR024084 Isopropylmalate dehydrogenase-like domain SE87_RS08150 IPR000905 Gcp-like domain SE87_RS08150 IPR017860 Peptidase M22, conserved site SE87_RS08150 IPR017861 Kae1/YgjD family SE87_RS08150 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD SE87_RS08155 IPR001444 Flagellar basal body rod protein, N-terminal SE87_RS08155 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SE87_RS08155 IPR012834 Flagellar basal-body rod FlgG SE87_RS08155 IPR019776 Flagellar basal body rod protein, conserved site SE87_RS08155 IPR020013 Fagellar hook-basal body protein, FlgE/F/G SE87_RS08170 IPR021150 Ubiquinol-cytochrome c chaperone/UPF0174 SE87_RS08170 IPR025217 Domain of unknown function DUF3944 SE87_RS08175 IPR021150 Ubiquinol-cytochrome c chaperone/UPF0174 SE87_RS08180 IPR025217 Domain of unknown function DUF3944 SE87_RS08195 IPR020579 Exonuclease VII, large subunit, C-terminal SE87_RS08200 IPR000055 Restriction endonuclease, type I, HsdS