locus-tag	class	description
EYC13_RS00020	COG0708	Exodeoxyribonuclease III
EYC13_RS00035	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
EYC13_RS00075	COG0195	Participates in both transcription termination and antitermination
EYC13_RS00080	COG1921	L-seryl-tRNASec selenium transferase activity
EYC13_RS00100	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
EYC13_RS00105	COG0348	domain, Protein
EYC13_RS00115	COG0786	glutamate:sodium symporter activity
EYC13_RS00125	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
EYC13_RS00170	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
EYC13_RS00180	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
EYC13_RS00185	COG0306	phosphate transporter
EYC13_RS00190	COG1253	flavin adenine dinucleotide binding
EYC13_RS00200	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
EYC13_RS00215	COG1739	Uncharacterized protein family UPF0029
EYC13_RS00220	COG1981	membrane
EYC13_RS00225	COG2226	methyltransferase
EYC13_RS00260	COG0163	prenyltransferase activity
EYC13_RS00265	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
EYC13_RS00295	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
EYC13_RS00295	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
EYC13_RS00305	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
EYC13_RS00315	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
EYC13_RS00320	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
EYC13_RS00345	COG0587	DNA-directed DNA polymerase activity
EYC13_RS00350	COG1187	pseudouridine synthase activity
EYC13_RS00355	COG3118	belongs to the thioredoxin family
EYC13_RS00395	COG0706	membrane insertase activity
EYC13_RS00415	COG0848	biopolymer transport protein
EYC13_RS00420	COG0811	peptide transport
EYC13_RS00430	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
EYC13_RS00440	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
EYC13_RS00480	COG0788	formyltetrahydrofolate deformylase activity
EYC13_RS00500	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
EYC13_RS00505	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
EYC13_RS00505	COG0517	IMP dehydrogenase activity
EYC13_RS00525	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
EYC13_RS00535	COG4962	Type ii secretion system protein e
EYC13_RS00540	COG1157	protein secretion by the type III secretion system
EYC13_RS00545	COG1987	bacterial-type flagellum assembly
EYC13_RS00550	COG0812	UDP-N-acetylmuramate dehydrogenase activity
EYC13_RS00555	COG2194	sulfuric ester hydrolase activity
EYC13_RS00570	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
EYC13_RS00575	COG0799	negative regulation of ribosome biogenesis
EYC13_RS00615	COG0668	transmembrane transport
EYC13_RS00635	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
EYC13_RS00640	COG0849	cell division
EYC13_RS00650	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
EYC13_RS00655	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
EYC13_RS00660	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
EYC13_RS00695	COG3309	Virulence-associated protein D
EYC13_RS00705	COG1160	GTP binding
EYC13_RS00725	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
EYC13_RS00735	COG1519	Transferase
EYC13_RS00735	COG0220	tRNA (guanine-N7-)-methyltransferase activity
EYC13_RS00740	COG0564	pseudouridine synthase activity
EYC13_RS00745	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
EYC13_RS00760	COG1058	Belongs to the CinA family
EYC13_RS00760	COG1546	Belongs to the CinA family
EYC13_RS00770	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
EYC13_RS00790	COG1757	Na H antiporter
EYC13_RS00820	COG0251	oxidation-reduction process
EYC13_RS00825	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
EYC13_RS00830	COG1115	amino acid carrier protein
EYC13_RS00840	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
EYC13_RS00845	COG0765	amino acid transport
EYC13_RS00880	COG0602	queuosine metabolic process
EYC13_RS00885	COG0720	synthase
EYC13_RS00900	COG0142	geranyltranstransferase activity
EYC13_RS00925	COG1942	4-Oxalocrotonate Tautomerase
EYC13_RS00940	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
EYC13_RS00945	COG0670	Belongs to the BI1 family
EYC13_RS00950	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
EYC13_RS00995	COG1749	Flagellar hook protein flgE
EYC13_RS00995	COG1749	Flagellar hook protein flgE
EYC13_RS01000	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
EYC13_RS01010	COG0280	phosphate acetyltransferase
EYC13_RS01025	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
EYC13_RS01030	COG0298	carbon dioxide binding
EYC13_RS01035	COG0409	Hydrogenase expression formation protein
EYC13_RS01080	COG0505	Belongs to the CarA family
EYC13_RS01095	COG0697	spore germination
EYC13_RS01105	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
EYC13_RS01120	COG0527	aspartate kinase activity
EYC13_RS01130	COG2863	cytochrome
EYC13_RS01135	COG0635	Involved in the biosynthesis of porphyrin-containing compound
EYC13_RS01160	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
EYC13_RS01165	COG1131	(ABC) transporter
EYC13_RS01170	COG0151	Belongs to the GarS family
EYC13_RS01180	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
EYC13_RS01210	COG1045	serine acetyltransferase
EYC13_RS01230	COG1132	(ABC) transporter
EYC13_RS01275	COG0250	Participates in transcription elongation, termination and antitermination
EYC13_RS01300	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
EYC13_RS01300	COG0085	RNA polymerase activity
EYC13_RS01325	COG0859	PFAM glycosyl transferase family 9
EYC13_RS01335	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
EYC13_RS01350	COG2814	Major facilitator Superfamily
EYC13_RS01360	COG0569	domain protein
EYC13_RS01360	COG0475	glutathione-regulated potassium exporter activity
EYC13_RS01365	COG0037	tRNA processing
EYC13_RS01370	COG2814	Major facilitator Superfamily
EYC13_RS01380	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
EYC13_RS01415	COG2252	PERMEase
EYC13_RS01420	COG0738	Major facilitator superfamily
EYC13_RS01435	COG1126	abc transporter atp-binding protein
EYC13_RS01440	COG0765	amino acid transport
EYC13_RS01450	COG1966	Carbon starvation protein
EYC13_RS01470	COG0492	ferredoxin-NADP+ reductase activity
EYC13_RS01485	COG0716	FMN binding
EYC13_RS01495	COG2184	nucleotidyltransferase activity
EYC13_RS01500	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
EYC13_RS01525	COG0525	valine-tRNA ligase activity
EYC13_RS01530	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
EYC13_RS01550	COG0336	Belongs to the RNA methyltransferase TrmD family
EYC13_RS01580	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
EYC13_RS01585	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
EYC13_RS01585	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
EYC13_RS01590	COG1192	Involved in chromosome partitioning
EYC13_RS01595	COG1475	DNA binding
EYC13_RS01635	COG0811	peptide transport
EYC13_RS01640	COG0848	biopolymer transport protein
EYC13_RS01650	COG0823	Involved in the tonB-independent uptake of proteins
EYC13_RS01655	COG2885	chlorophyll binding
EYC13_RS01665	COG1047	Peptidyl-prolyl cis-trans
EYC13_RS01695	COG0405	Gamma-glutamyltransferase
EYC13_RS01720	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
EYC13_RS01725	COG1013	pyruvate-flavodoxin oxidoreductase activity
EYC13_RS01730	COG0674	pyruvate-flavodoxin oxidoreductase activity
EYC13_RS01740	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
EYC13_RS01765	COG1064	alcohol dehydrogenase
EYC13_RS01775	COG0363	glucosamine-6-phosphate deaminase activity
EYC13_RS01780	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
EYC13_RS01785	COG0129	dihydroxy-acid dehydratase activity
EYC13_RS01790	COG0800	Aldolase
EYC13_RS01795	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
EYC13_RS01800	COG4221	oxidoreductase activity
EYC13_RS01835	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
EYC13_RS01840	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
EYC13_RS01850	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
EYC13_RS01870	COG0439	Biotin carboxylase
EYC13_RS01875	COG0511	ligase activity, forming carbon-carbon bonds
EYC13_RS01890	COG1385	rRNA (uridine-N3-)-methyltransferase activity
EYC13_RS01910	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
EYC13_RS01910	COG1333	cytochrome c biogenesis protein
EYC13_RS01920	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
EYC13_RS01925	COG2890	protein-(glutamine-N5) methyltransferase activity
EYC13_RS01930	COG0501	Belongs to the peptidase M48B family
EYC13_RS01955	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
EYC13_RS01965	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
EYC13_RS01970	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
EYC13_RS01975	COG0835	chemotaxis
EYC13_RS01980	COG0643	Histidine kinase
EYC13_RS01980	COG2198	Histidine kinase
EYC13_RS01980	COG0784	Response regulator, receiver
EYC13_RS01985	COG0784	Response regulator, receiver
EYC13_RS01985	COG0835	chemotaxis
EYC13_RS01995	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
EYC13_RS02000	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
EYC13_RS02005	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
EYC13_RS02015	COG1185	polyribonucleotide nucleotidyltransferase activity
EYC13_RS02015	COG0539	negative regulation of cytoplasmic translation
EYC13_RS02030	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
EYC13_RS02030	COG0072	phenylalanine-tRNA ligase activity
EYC13_RS02040	COG0537	adenosine 5'-monophosphoramidase activity
EYC13_RS02045	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
EYC13_RS02100	COG0668	transmembrane transport
EYC13_RS02105	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
EYC13_RS02110	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
EYC13_RS02110	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
EYC13_RS02135	COG1166	arginine decarboxylase activity
EYC13_RS02155	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
EYC13_RS02210	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
EYC13_RS02235	COG1217	gtp-binding protein TYPA
EYC13_RS02335	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
EYC13_RS02345	COG0824	Thioesterase
EYC13_RS02350	COG0733	neurotransmitter:sodium symporter activity
EYC13_RS02355	COG0733	neurotransmitter:sodium symporter activity
EYC13_RS02365	COG0592	DNA-directed DNA polymerase activity
EYC13_RS02370	COG0187	DNA topoisomerase II activity
EYC13_RS02385	COG0739	heme binding
EYC13_RS02385	COG0741	lytic transglycosylase activity
EYC13_RS02385	COG1196	nuclear chromosome segregation
EYC13_RS02415	COG0174	glutamine synthetase
EYC13_RS02505	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
EYC13_RS02515	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
EYC13_RS02520	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
EYC13_RS02545	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
EYC13_RS02555	COG1028	Short-chain dehydrogenase reductase Sdr
EYC13_RS02585	COG0628	permease
EYC13_RS02595	COG0012	GTP binding
EYC13_RS02620	COG0698	ribose 5-phosphate isomerase
EYC13_RS02625	COG1994	Peptidase M50
EYC13_RS02630	COG0681	Belongs to the peptidase S26 family
EYC13_RS02670	COG1776	CheC inhibitor of MCP methylation
EYC13_RS02670	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
EYC13_RS02675	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
EYC13_RS02680	COG1918	ferrous iron import across plasma membrane
EYC13_RS02700	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
EYC13_RS02700	COG0674	pyruvate-flavodoxin oxidoreductase activity
EYC13_RS02705	COG1013	pyruvate-flavodoxin oxidoreductase activity
EYC13_RS02740	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
EYC13_RS02745	COG0156	8-amino-7-oxononanoate synthase activity
EYC13_RS02750	COG0840	transmembrane signaling receptor activity
EYC13_RS02755	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
EYC13_RS02805	COG1131	(ABC) transporter
EYC13_RS02820	COG0784	Response regulator, receiver
EYC13_RS02820	COG0835	chemotaxis
EYC13_RS02825	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
EYC13_RS02835	COG3306	glycosyltransferase involved in LPS biosynthesis
EYC13_RS02845	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
EYC13_RS02850	COG1193	negative regulation of DNA recombination
EYC13_RS02865	COG0436	Aminotransferase
EYC13_RS02875	COG2171	N-acyltransferase activity
EYC13_RS02890	COG2249	NAD(P)H dehydrogenase (quinone) activity
EYC13_RS02895	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
EYC13_RS02900	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
EYC13_RS02905	COG1969	Ni Fe-hydrogenase, b-type cytochrome subunit
EYC13_RS02910	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
EYC13_RS02915	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
EYC13_RS02940	COG1912	Pfam S-adenosyl-l-methionine hydroxide adenosyltransferase
EYC13_RS02960	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
EYC13_RS02980	COG2204	response regulator
EYC13_RS02990	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
EYC13_RS02995	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
EYC13_RS03005	COG4647	ligase activity
EYC13_RS03010	COG0146	N-methylhydantoinase B acetone carboxylase alpha subunit
EYC13_RS03015	COG0145	ligase activity
EYC13_RS03025	COG2031	fatty acid transporter
EYC13_RS03030	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
EYC13_RS03035	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
EYC13_RS03040	COG0183	Belongs to the thiolase family
EYC13_RS03050	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
EYC13_RS03060	COG1338	Plays a role in the flagellum-specific transport system
EYC13_RS03065	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
EYC13_RS03090	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
EYC13_RS03100	COG0730	response to heat
EYC13_RS03110	COG4974	Belongs to the 'phage' integrase family
EYC13_RS03145	COG0635	Involved in the biosynthesis of porphyrin-containing compound
EYC13_RS03155	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
EYC13_RS03160	COG0571	ribonuclease III activity
EYC13_RS03165	COG0328	RNA-DNA hybrid ribonuclease activity
EYC13_RS03190	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
EYC13_RS03195	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
EYC13_RS03200	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
EYC13_RS03205	COG1528	Iron-storage protein
EYC13_RS03210	COG0560	Phosphoserine phosphatase
EYC13_RS03225	COG1027	Aspartate ammonia-lyase
EYC13_RS03250	COG0762	integral membrane protein
EYC13_RS03260	COG0778	Nitroreductase
EYC13_RS03275	COG0617	tRNA 3'-terminal CCA addition
EYC13_RS03290	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
EYC13_RS03295	COG1137	ATPase activity
EYC13_RS03305	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
EYC13_RS03310	COG1279	arginine transmembrane transporter activity
EYC13_RS03325	COG0252	asparaginase activity
EYC13_RS03330	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
EYC13_RS03345	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
EYC13_RS03350	COG0037	tRNA processing
EYC13_RS03375	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
EYC13_RS03380	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
EYC13_RS03385	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
EYC13_RS03390	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
EYC13_RS03405	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
EYC13_RS03415	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
EYC13_RS03425	COG0772	Belongs to the SEDS family
EYC13_RS03435	COG0564	pseudouridine synthase activity
EYC13_RS03445	COG0220	tRNA (guanine-N7-)-methyltransferase activity
EYC13_RS03450	COG2884	Cell division ATP-binding protein ftsE
EYC13_RS03470	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
EYC13_RS03485	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
EYC13_RS03500	COG2056	Na+-H+ antiporter family
EYC13_RS03505	COG0534	Mate efflux family protein
EYC13_RS03510	COG1418	mRNA catabolic process
EYC13_RS03525	COG0552	protein localization to endoplasmic reticulum
EYC13_RS03555	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
EYC13_RS03565	COG0860	N-Acetylmuramoyl-L-alanine amidase
EYC13_RS03570	COG0126	phosphoglycerate kinase activity
EYC13_RS03575	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
EYC13_RS03580	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
EYC13_RS03585	COG1758	RNA polymerase activity
EYC13_RS03600	COG1049	propionate catabolic process, 2-methylcitrate cycle
EYC13_RS03630	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
EYC13_RS03655	COG2217	Heavy metal translocating P-type atpase
EYC13_RS03660	COG0606	chelatase, subunit chli
EYC13_RS03690	COG0315	cyclic pyranopterin monophosphate synthase activity
EYC13_RS03695	COG0521	Mo-molybdopterin cofactor biosynthetic process
EYC13_RS03700	COG0314	molybdopterin synthase activity
EYC13_RS03720	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
EYC13_RS03720	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
EYC13_RS03755	COG1580	Controls the rotational direction of flagella during chemotaxis
EYC13_RS03775	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
EYC13_RS03780	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
EYC13_RS03785	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
EYC13_RS03790	COG1360	Flagellar Motor Protein
EYC13_RS03800	COG1732	Glycine betaine
EYC13_RS03805	COG0517	IMP dehydrogenase activity
EYC13_RS03805	COG1125	glycine betaine transport
EYC13_RS03825	COG0460	homoserine dehydrogenase
EYC13_RS03835	COG3118	belongs to the thioredoxin family
EYC13_RS03840	COG0492	ferredoxin-NADP+ reductase activity
EYC13_RS03850	COG0724	RNA recognition motif
EYC13_RS03860	COG0517	IMP dehydrogenase activity
EYC13_RS03860	COG0516	GMP reductase activity
EYC13_RS03870	COG0237	dephospho-CoA kinase activity
EYC13_RS03890	COG0776	regulation of translation
EYC13_RS03915	COG1086	Polysaccharide biosynthesis protein
EYC13_RS03920	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
EYC13_RS03935	COG0351	phosphomethylpyrimidine kinase
EYC13_RS03970	COG0671	phosphoesterase, PA-phosphatase related
EYC13_RS03980	COG0488	(ABC) transporter
EYC13_RS03990	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
EYC13_RS03995	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
EYC13_RS03995	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
EYC13_RS04000	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
EYC13_RS04005	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
EYC13_RS04015	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
EYC13_RS04035	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
EYC13_RS04050	COG0375	protein maturation
EYC13_RS04055	COG1749	Flagellar hook protein flgE
EYC13_RS04060	COG2134	cdp-diacylglycerol pyrophosphatase
EYC13_RS04065	COG2824	Alkylphosphonate utilization operon protein PhnA
EYC13_RS04080	COG0753	catalase activity
EYC13_RS04115	COG0728	peptidoglycan biosynthetic process
EYC13_RS04130	COG1120	ATPase activity
EYC13_RS04135	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
EYC13_RS04140	COG0300	oxidoreductase activity
EYC13_RS04145	COG1607	acyl-coa hydrolase
EYC13_RS04150	COG3041	Addiction module toxin RelE StbE family
EYC13_RS04170	COG0629	single-stranded DNA binding
EYC13_RS04180	COG1466	dna polymerase III delta subunit
EYC13_RS04185	COG0557	exoribonuclease II activity
EYC13_RS04200	COG4174	ABC transporter (Permease)
EYC13_RS04205	COG4166	transmembrane transport
EYC13_RS04210	COG0180	Tryptophanyl-tRNA synthetase
EYC13_RS04220	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
EYC13_RS04240	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
EYC13_RS04245	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
EYC13_RS04255	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
EYC13_RS04285	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
EYC13_RS04290	COG0839	Belongs to the complex I subunit 6 family
EYC13_RS04300	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
EYC13_RS04310	COG1007	ATP synthesis coupled electron transport
EYC13_RS04335	COG0133	tryptophan synthase activity
EYC13_RS04340	COG0135	phosphoribosylanthranilate isomerase activity
EYC13_RS04340	COG0134	indole-3-glycerol-phosphate synthase activity
EYC13_RS04345	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
EYC13_RS04350	COG0512	Glutamine amidotransferase of anthranilate synthase
EYC13_RS04355	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
EYC13_RS04360	COG0859	PFAM glycosyl transferase family 9
EYC13_RS04370	COG2353	YceI-like domain
EYC13_RS04375	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
EYC13_RS04395	COG0202	RNA polymerase activity
EYC13_RS04400	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
EYC13_RS04420	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
EYC13_RS04425	COG0024	Methionine aminopeptidase
EYC13_RS04430	COG0201	protein transport
EYC13_RS04465	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
EYC13_RS04485	COG0255	Belongs to the universal ribosomal protein uL29 family
EYC13_RS04495	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
EYC13_RS04500	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
EYC13_RS04525	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
EYC13_RS04555	COG0114	fumarate hydratase activity
EYC13_RS04570	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
EYC13_RS04575	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
EYC13_RS04580	COG1687	branched-chain amino acid
EYC13_RS04585	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
EYC13_RS04590	COG0484	heat shock protein binding
EYC13_RS04600	COG0482	sulfurtransferase activity
EYC13_RS04615	COG0864	Transcriptional regulator
EYC13_RS04620	COG0811	peptide transport
EYC13_RS04625	COG0848	biopolymer transport protein
EYC13_RS04630	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
EYC13_RS04645	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
EYC13_RS04665	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
EYC13_RS04715	COG0542	response to heat
EYC13_RS04720	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
EYC13_RS04725	COG0589	response to stress
EYC13_RS04735	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
EYC13_RS04745	COG0538	isocitrate dehydrogenase activity
EYC13_RS04750	COG0372	Belongs to the citrate synthase family
EYC13_RS04760	COG2189	Belongs to the N(4) N(6)-methyltransferase family
EYC13_RS04765	COG3421	Type III restriction
EYC13_RS04775	COG1295	ribonuclease BN
EYC13_RS04865	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
EYC13_RS04885	COG1028	Short-chain dehydrogenase reductase Sdr
EYC13_RS04895	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
EYC13_RS04900	COG0833	amino acid
EYC13_RS04910	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
EYC13_RS04910	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
EYC13_RS04915	COG0745	RESPONSE REGULATOR receiver
EYC13_RS04930	COG0484	heat shock protein binding
EYC13_RS04935	COG0789	Transcriptional regulator
EYC13_RS04940	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
EYC13_RS04940	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
EYC13_RS04945	COG0735	belongs to the Fur family
EYC13_RS04960	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
EYC13_RS04960	COG1776	CheC inhibitor of MCP methylation
EYC13_RS04965	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
EYC13_RS04980	COG0455	bacterial-type flagellum organization
EYC13_RS04985	COG1419	protein localization to endoplasmic reticulum
EYC13_RS04990	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
EYC13_RS04995	COG0006	proline dipeptidase activity
EYC13_RS05015	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
EYC13_RS05020	COG2404	hydrolase activity, acting on ester bonds
EYC13_RS05025	COG0745	RESPONSE REGULATOR receiver
EYC13_RS05030	COG1408	metallophosphoesterase
EYC13_RS05060	COG0083	homoserine kinase activity
EYC13_RS05070	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
EYC13_RS05115	COG0805	protein transport
EYC13_RS05125	COG0357	Ribosomal RNA small subunit methyltransferase G
EYC13_RS05150	COG0745	RESPONSE REGULATOR receiver
EYC13_RS05160	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
EYC13_RS05170	COG1183	phosphatidylcholine synthase activity
EYC13_RS05175	COG2217	Heavy metal translocating P-type atpase
EYC13_RS05180	COG2608	mercury ion transmembrane transporter activity
EYC13_RS05200	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
EYC13_RS05210	COG1106	Psort location Cytoplasmic, score
EYC13_RS05225	COG1132	(ABC) transporter
EYC13_RS05245	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
EYC13_RS05250	COG0196	riboflavin kinase activity
EYC13_RS05255	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
EYC13_RS05265	COG1674	ftsk spoiiie
EYC13_RS05270	COG0477	Major facilitator Superfamily
EYC13_RS05275	COG4786	Flagellar basal body rod
EYC13_RS05290	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
EYC13_RS05300	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
EYC13_RS05305	COG1766	The M ring may be actively involved in energy transduction
EYC13_RS05315	COG0504	CTP synthase activity
EYC13_RS05320	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
EYC13_RS05320	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
EYC13_RS05325	COG0564	pseudouridine synthase activity
EYC13_RS05365	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
EYC13_RS05375	COG0758	DNA mediated transformation
EYC13_RS05375	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
EYC13_RS05385	COG2894	cell division
EYC13_RS05405	COG1663	tetraacyldisaccharide 4'-kinase activity
EYC13_RS05410	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
EYC13_RS05415	COG3980	spore coat polysaccharide biosynthesis protein
EYC13_RS05420	COG3980	spore coat polysaccharide biosynthesis protein
EYC13_RS05425	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
EYC13_RS05460	COG0748	coenzyme F420 binding
EYC13_RS05470	COG0523	cobalamin synthesis protein
EYC13_RS05490	COG0726	polysaccharide deacetylase
EYC13_RS05495	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
EYC13_RS05530	COG4608	Belongs to the ABC transporter superfamily
EYC13_RS05535	COG0444	Belongs to the ABC transporter superfamily
EYC13_RS05540	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
EYC13_RS05545	COG0601	transmembrane transport
EYC13_RS05550	COG0747	negative chemotaxis
EYC13_RS05575	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
EYC13_RS05590	COG0019	diaminopimelate decarboxylase activity
EYC13_RS05610	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
EYC13_RS05615	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
EYC13_RS05645	COG0859	PFAM glycosyl transferase family 9
EYC13_RS05650	COG0248	Ppx GppA phosphatase
EYC13_RS05660	COG0134	indole-3-glycerol-phosphate synthase activity
EYC13_RS05670	COG0727	PFAM Uncharacterised protein family (UPF0153)
EYC13_RS05705	COG0402	S-adenosylhomocysteine deaminase activity
EYC13_RS05710	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
EYC13_RS05715	COG0785	Cytochrome C biogenesis protein
EYC13_RS05720	COG0542	response to heat
EYC13_RS05750	COG0750	zinc metalloprotease
EYC13_RS05785	COG4239	(ABC) transporter, permease
EYC13_RS05815	COG3951	Flagellar rod assembly protein muramidase FlgJ
EYC13_RS05820	COG0642	Histidine kinase
EYC13_RS05825	COG0783	Belongs to the Dps family
EYC13_RS05865	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
EYC13_RS05875	COG0754	glutathionylspermidine amidase activity
EYC13_RS05905	COG0659	secondary active sulfate transmembrane transporter activity
EYC13_RS05915	COG0730	response to heat
EYC13_RS05925	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
EYC13_RS05925	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
EYC13_RS05930	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
EYC13_RS05945	COG1104	cysteine desulfurase activity
EYC13_RS05955	COG1881	PFAM PEBP family protein
EYC13_RS05965	COG0575	Belongs to the CDS family
EYC13_RS05970	COG0471	metal ion transport
EYC13_RS05985	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
EYC13_RS05990	COG0326	Molecular chaperone. Has ATPase activity
EYC13_RS06005	COG0489	protein tyrosine kinase activity
EYC13_RS06055	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
EYC13_RS06060	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
EYC13_RS06075	COG1053	succinate dehydrogenase
EYC13_RS06080	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
EYC13_RS06085	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
EYC13_RS06135	COG0815	Transfers the fatty acyl group on membrane lipoproteins
EYC13_RS06140	COG1136	(ABC) transporter
EYC13_RS06145	COG2089	acid synthase
EYC13_RS06155	COG0191	fructose-bisphosphate aldolase activity
EYC13_RS06160	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
EYC13_RS06190	COG0826	peptidase U32
EYC13_RS06205	COG0745	RESPONSE REGULATOR receiver
EYC13_RS06215	COG0113	porphobilinogen synthase activity
EYC13_RS06225	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
EYC13_RS06255	COG0148	phosphopyruvate hydratase activity
EYC13_RS06305	COG3278	Belongs to the heme-copper respiratory oxidase family
EYC13_RS06310	COG0471	metal ion transport
EYC13_RS06315	COG1194	a g-specific adenine glycosylase
EYC13_RS06320	COG1620	l-lactate permease
EYC13_RS06325	COG1620	l-lactate permease
EYC13_RS06330	COG0247	lactate metabolic process
EYC13_RS06335	COG1139	Iron-sulfur cluster binding protein
EYC13_RS06345	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
EYC13_RS06350	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
EYC13_RS06355	COG0814	amino acid
EYC13_RS06360	COG1760	l-serine dehydratase
EYC13_RS06390	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
EYC13_RS06400	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
EYC13_RS06400	COG0574	Belongs to the PEP-utilizing enzyme family
EYC13_RS06410	COG0731	radical SAM domain protein
EYC13_RS06415	COG0551	DNA topoisomerase type I activity
EYC13_RS06415	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
EYC13_RS06420	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
EYC13_RS06440	COG1420	regulation of RNA biosynthetic process
EYC13_RS06455	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
EYC13_RS06460	COG0626	cystathionine gamma-synthase activity
EYC13_RS06470	COG0737	Belongs to the 5'-nucleotidase family
EYC13_RS06480	COG1216	Glycosyl transferase, family 2
EYC13_RS06490	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
EYC13_RS06495	COG0840	transmembrane signaling receptor activity
EYC13_RS06500	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
EYC13_RS06510	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
EYC13_RS06545	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
EYC13_RS06550	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
EYC13_RS06555	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
EYC13_RS06585	COG0840	transmembrane signaling receptor activity
EYC13_RS06610	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
EYC13_RS06625	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
EYC13_RS06655	COG0830	nickel cation binding
EYC13_RS06670	COG1674	ftsk spoiiie
EYC13_RS06740	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
EYC13_RS06740	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
EYC13_RS06740	COG0506	proline dehydrogenase activity
EYC13_RS06745	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
EYC13_RS06765	COG0861	Integral membrane protein TerC family
EYC13_RS06770	COG0598	Magnesium transport protein CorA
EYC13_RS06775	COG0126	phosphoglycerate kinase activity
EYC13_RS06780	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
EYC13_RS06790	COG0204	Acyl-transferase
EYC13_RS06800	COG0793	Belongs to the peptidase S41A family
EYC13_RS06820	COG0157	Belongs to the NadC ModD family
EYC13_RS06825	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
EYC13_RS06845	COG0109	protoheme IX farnesyltransferase activity
EYC13_RS06855	COG0305	Participates in initiation and elongation during chromosome replication
EYC13_RS06860	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
EYC13_RS06860	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
EYC13_RS06865	COG0642	Histidine kinase
EYC13_RS06870	COG0745	RESPONSE REGULATOR receiver
EYC13_RS06885	COG2189	Belongs to the N(4) N(6)-methyltransferase family
EYC13_RS06890	COG2189	Belongs to the N(4) N(6)-methyltransferase family
EYC13_RS06905	COG1077	Cell shape determining protein MreB Mrl
EYC13_RS06910	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
EYC13_RS06920	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
EYC13_RS06925	COG1699	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
EYC13_RS06930	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
EYC13_RS06935	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
EYC13_RS06940	COG0287	Prephenate dehydrogenase
EYC13_RS06955	COG2194	sulfuric ester hydrolase activity
EYC13_RS06960	COG0671	phosphoesterase, PA-phosphatase related
EYC13_RS06970	COG0784	Response regulator, receiver
EYC13_RS06970	COG0835	chemotaxis
EYC13_RS07005	COG0482	sulfurtransferase activity
EYC13_RS07010	COG0358	DNA primase activity
EYC13_RS07075	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
EYC13_RS07085	COG4735	regulation of single-species biofilm formation
EYC13_RS07100	COG4786	Flagellar basal body rod
EYC13_RS07130	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
EYC13_RS07135	COG0671	phosphoesterase, PA-phosphatase related
EYC13_RS07145	COG2011	ABC-type metal ion transport system permease component
EYC13_RS07160	COG0307	riboflavin synthase, alpha
EYC13_RS07165	COG0084	hydrolase, TatD family'
EYC13_RS07170	COG1388	LysM domain
EYC13_RS07170	COG0741	lytic transglycosylase activity
EYC13_RS07175	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
EYC13_RS07180	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
EYC13_RS07205	COG0768	penicillin binding
EYC13_RS07215	COG0450	alkyl hydroperoxide reductase
EYC13_RS07225	COG0772	Belongs to the SEDS family
EYC13_RS07235	COG1558	bacterial-type flagellum-dependent cell motility
EYC13_RS07250	COG0768	penicillin binding
EYC13_RS07275	COG0723	plastoquinol--plastocyanin reductase activity
EYC13_RS07280	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
EYC13_RS07290	COG0739	heme binding
EYC13_RS07295	COG0739	heme binding
EYC13_RS07310	COG0495	leucyl-tRNA aminoacylation
EYC13_RS07320	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
EYC13_RS07325	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
EYC13_RS07330	COG1862	Preprotein translocase
EYC13_RS07340	COG1074	ATP-dependent DNA helicase activity
EYC13_RS07380	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
EYC13_RS07385	COG2176	DNA-directed DNA polymerase activity
EYC13_RS07405	COG0497	DNA recombination
EYC13_RS07425	COG0686	Belongs to the AlaDH PNT family
EYC13_RS07430	COG0833	amino acid
EYC13_RS07435	COG0010	Belongs to the arginase family
EYC13_RS07470	COG0732	type I restriction modification DNA specificity domain
EYC13_RS07480	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
EYC13_RS07485	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity