locus-tag	shortName	longName	description	GeneName
D4K88_RS00005	B5Z9E3	DNAA_HELPG	Chromosomal replication initiator protein DnaA	dnaA
D4K88_RS00010	*			
D4K88_RS00015	*			
D4K88_RS00020	P37454	EXOA_BACSU	Exodeoxyribonuclease	exoA
D4K88_RS00025	*			
D4K88_RS00030	*			
D4K88_RS00035	O26051	RECG_HELPY	ATP-dependent DNA helicase RecG	recG
D4K88_RS00040	P40814	T3MO_SALTY	Type III restriction-modification system StyLTI enzyme mod	mod
D4K88_RS00045	*			
D4K88_RS00050	P25241	T3RE_BACC1	Type III restriction-modification system Bce10987IP enzyme res	res
D4K88_RS00055	*			
D4K88_RS00060	*			
D4K88_RS00065	P25239	T257_ECOLX	Type IIS restriction enzyme Eco57I	eco57IR
D4K88_RS00070	A0A0H3CCP8	SOCA_CAUVN	Antitoxin SocA	socA
D4K88_RS00075	*			
D4K88_RS00080	P55977	NUSA_HELPY	Transcription termination/antitermination protein NusA	nusA
D4K88_RS00085	O26043	SELA_HELPY	L-seryl-tRNA(Sec) selenium transferase	selA
D4K88_RS00090	*			
D4K88_RS00095	*			
D4K88_RS00100	*			
D4K88_RS00105	Q9ZJB1	PLSY_HELPJ	Glycerol-3-phosphate acyltransferase	plsY
D4K88_RS00110	Q01854	RDXA_RHOS4	Protein RdxA	rdxA
D4K88_RS00115	P0DPE4	CANSD_VIBAX	Carboxynorspermidine synthase	vioD
D4K88_RS00120	P0AER8	GLTS_ECOLI	Sodium/glutamate symporter	gltS
D4K88_RS00125	P9WPH0	RIBD_MYCTO	Riboflavin biosynthesis protein RibD	ribD
D4K88_RS00130	Q3IG80	TRMN6_PSET1	tRNA1(Val) (adenine(37)-N6)-methyltransferase	yfiC
D4K88_RS00135	P77868	Y290_HAEIN	Probable cation-transporting ATPase HI_0290	yrrT
D4K88_RS00140	*			
D4K88_RS00145	*			
D4K88_RS00155	*			
D4K88_RS00160	Q1CRD9	PTH_HELPH	Peptidyl-tRNA hydrolase	pth
D4K88_RS00165	Q1CRD8	RL25_HELPH	50S ribosomal protein L25	rplY
D4K88_RS00170	P56108	TAL_HELPY	Transaldolase	tal
D4K88_RS00175	Q9ZJC6	MURE_HELPJ	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase	murE
D4K88_RS00180	*			
D4K88_RS00185	O32119	YUTI_BACSU	Putative nitrogen fixation protein YutI	yutI
D4K88_RS00190	O26024	Y1491_HELPY	Putative phosphate permease HP_1491	fabG2
D4K88_RS00195	O05241	YUGS_BACSU	UPF0053 protein YugS	yugS
D4K88_RS00200	*			
D4K88_RS00205	P94851	AN36_HELPY	36 kDa antigen	tam
D4K88_RS00210	*			
D4K88_RS00215	*			
D4K88_RS00220	P44842	Y722_HAEIN	IMPACT family member HI_0722	metK1
D4K88_RS00225	O26018	HEMJ_HELPY	Protoporphyrinogen IX oxidase	hemH
D4K88_RS00230	A1VY43	UBIE_CAMJJ	Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE	ubiE
D4K88_RS00235	Q1CRC4	EX7S_HELPH	Exodeoxyribonuclease 7 small subunit	xseB
D4K88_RS00240	*			
D4K88_RS00245	B5Z999	SYS_HELPG	Serine--tRNA ligase	serS
D4K88_RS00250	*			
D4K88_RS00255	Q8CRT9	PCRA_STAES	ATP-dependent DNA helicase PcrA	pcrA
D4K88_RS00260	*			
D4K88_RS00265	O26011	UBIX_HELPY	Flavin prenyltransferase UbiX	ubiX
D4K88_RS00270	O26010	COAD_HELPY	Phosphopantetheine adenylyltransferase	coaD
D4K88_RS00275	Q9ZJE5	KTHY_HELPJ	Thymidylate kinase	tmk
D4K88_RS00280	*			
D4K88_RS00285	Q07605	T4BA_BACCO	Restriction enzyme BgcI subunit alpha	bcgIA
D4K88_RS00290	*			
D4K88_RS00295	Q9ZJE9	DPO1_HELPJ	DNA polymerase I	polA
D4K88_RS00300	*			
D4K88_RS00305	O26004	ILVE_HELPY	Branched-chain-amino-acid aminotransferase	ilvE
D4K88_RS00310	*			
D4K88_RS00315	Q1RGU3	Y1340_RICBR	Probable ABC transporter permease protein RBE_1340	radC
D4K88_RS00320	Q0AU85	METN_SYNWW	Methionine import ATP-binding protein MetN	metN
D4K88_RS00325	*			
D4K88_RS00330	*			
D4K88_RS00335	*			
D4K88_RS00340	P14532	CCPR_PSEAE	Cytochrome c551 peroxidase	ccpA
D4K88_RS00345	Q9ZJF9	DPO3A_HELPJ	DNA polymerase III subunit alpha	dnaE
D4K88_RS00350	Q9ZJG0	YE59_HELPJ	Uncharacterized RNA pseudouridine synthase jhp_1352	ydzX
D4K88_RS00355	Q7M1B9	THIO_CHLAA	Thioredoxin	trxA
D4K88_RS00360	*			
D4K88_RS00365	P0A0V0	LPP20_HELPY	LPP20 lipoprotein	lpp20
D4K88_RS00370	*			
D4K88_RS00375	*			
D4K88_RS00380	*			
D4K88_RS00385	*			
D4K88_RS00390	Q9ZJG6	MNME_HELPJ	tRNA modification GTPase MnmE	mnmE
D4K88_RS00395	*			
D4K88_RS00400	O25989	YIDC_HELPY	Membrane protein insertase YidC	yidC
D4K88_RS00405	B2UVJ4	YIDD_HELPS	Putative membrane protein insertion efficiency factor	yidD
D4K88_RS00410	B6JNU5	RNPA_HELP2	Ribonuclease P protein component	rnpA
D4K88_RS00415	B2UVJ2	RL34_HELPS	50S ribosomal protein L34	rpmH
D4K88_RS00420	P64101	EXDL2_HELPY	Putative biopolymer transport protein ExbD-like 2	exc
D4K88_RS00425	O25986	EXBL2_HELPY	Putative biopolymer transport protein ExbB-like 2	exbD
D4K88_RS00430	B5Z963	SSRP_HELPG	SsrA-binding protein	smpB
D4K88_RS00435	O25984	ISPE_HELPY	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	ispE
D4K88_RS00440	B5Z961	CSRA_HELPG	Translational regulator CsrA	csrA
D4K88_RS00445	O25982	PPIA_HELPY	Peptidyl-prolyl cis-trans isomerase	ppiA
D4K88_RS00450	*			
D4K88_RS00465	*			
D4K88_RS00470	*			
D4K88_RS00475	*			
D4K88_RS00485	*			
D4K88_RS00490	*			
D4K88_RS00495	Q03432	PURU_HAEIN	Formyltetrahydrofolate deformylase	purU
D4K88_RS00500	*			
D4K88_RS00510	*			
D4K88_RS00515	B6JNS3	RSMA_HELP2	Ribosomal RNA small subunit methyltransferase A	rsmA
D4K88_RS00520	P56185	RNJ_HELPY	Ribonuclease J	rnj
D4K88_RS00525	Q9ZJI5	YE29_HELPJ	Uncharacterized protein jhp_1324	ydzX
D4K88_RS00530	Q1CRK2	RLMN_HELPH	Dual-specificity RNA methyltransferase RlmN	rlmN
D4K88_RS00535	*			
D4K88_RS00545	*			
D4K88_RS00550	O25966	Y1423_HELPY	Uncharacterized protein HP_1423	fabG2
D4K88_RS00555	Q1CRK7	SYI_HELPH	Isoleucine--tRNA ligase	ileS
D4K88_RS00560	P54907	TRBB_RHIRD	Conjugal transfer protein TrbB	trbB
D4K88_RS00565	O07025	FLII_HELPY	Flagellum-specific ATP synthase	fliI
D4K88_RS00570	P0A0S3	FLIQ_HELPY	Flagellar biosynthetic protein FliQ	fliQ
D4K88_RS00575	O25963	MURB_HELPY	UDP-N-acetylenolpyruvoylglucosamine reductase	murB
D4K88_RS00580	P43666	EPTB_SALTY	Kdo(2)-lipid A phosphoethanolamine 7''-transferase	eptB
D4K88_RS00585	*			
D4K88_RS00590	O25961	MIAA_HELPY	tRNA dimethylallyltransferase	miaA
D4K88_RS00595	P0AAT6	IOJAP_ECOLI	Ribosomal silencing factor RsfS	rsfS
D4K88_RS00600	O25959	QUEF_HELPY	NADPH-dependent 7-cyano-7-deazaguanine reductase	queF
D4K88_RS00605	*			
D4K88_RS00610	*			
D4K88_RS00615	*			
D4K88_RS00640	Q15NT4	Y3954_PSEA6	UPF0761 membrane protein Patl_3954	guaB3
D4K88_RS00645	B5Z928	BIOB_HELPG	Biotin synthase	bioB
D4K88_RS00665	*			
D4K88_RS00670	*			
D4K88_RS00675	P60110	HUTG_PHOLL	Formimidoylglutamase	hutG
D4K88_RS00680	Q08352	DHA_BACSU	Alanine dehydrogenase	ald
D4K88_RS00690	*			
D4K88_RS00695	Q1CR79	NADK_HELPH	NAD kinase	nadK
D4K88_RS00700	O25943	RECN_HELPY	DNA repair protein RecN	recN
D4K88_RS00705	*			
D4K88_RS00710	*			
D4K88_RS00720	*			
D4K88_RS00730	*			
D4K88_RS00735	Q2YXK4	DPO3_STAAB	DNA polymerase III PolC-type	polC
D4K88_RS00740	Q9ZJ75	RPE_HELPJ	Ribulose-phosphate 3-epimerase	rpe
D4K88_RS00745	B5Z9G5	F16PA_HELPG	Fructose-1,6-bisphosphatase class 1	fbp
D4K88_RS00750	*			
D4K88_RS00755	*			
D4K88_RS00760	*			
D4K88_RS00765	P20692	TYRA_BACSU	Prephenate dehydrogenase	tyrA
D4K88_RS00770	P55995	LON_HELPY	Lon protease	lon
D4K88_RS00775	O25930	BAMD_HELPY	Outer membrane protein assembly factor BamD	bamD
D4K88_RS00780	O25929	FLIW2_HELPY	Flagellar assembly factor FliW 2	fliW2
D4K88_RS00790	O25928	FABZ_HELPY	3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ	fabZ
D4K88_RS00795	B6JNP1	LPXA_HELP2	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase	lpxA
D4K88_RS00800	Q9ZJL8	CLPX_HELPJ	ATP-dependent Clp protease ATP-binding subunit ClpX	clpX
D4K88_RS00805	P0A9X4	MREB_ECOLI	Cell shape-determining protein MreB	mreB
D4K88_RS00810	*			
D4K88_RS00815	*			
D4K88_RS00820	P71366	T3MH_HAEIN	Putative type III restriction-modification system HindVIP enzyme mod	lhpH
D4K88_RS00825	O30569	MTS1_RHIME	Modification methylase SmeI	smeIM
D4K88_RS00830	P23192	MTM2_MORBO	Modification methylase MboII	mboIIM
D4K88_RS00835	P23191	T2M2_MORBO	Type-2 restriction enzyme MboII	mboIIR
D4K88_RS00840	O25918	CRDR_HELPY	Transcriptional regulatory protein CrdR	crdR
D4K88_RS00845	O25917	CRDS_HELPY	Sensor histidine kinase CrdS	crdS
D4K88_RS00850	Q9ZJM4	NNR_HELPJ	Bifunctional NAD(P)H-hydrate repair enzyme Nnr	nnr
D4K88_RS00855	O25916	DNAB_HELPY	Replicative DNA helicase	dnaB
D4K88_RS00860	*			
D4K88_RS00865	A5CF31	COXX_ORITB	Protoheme IX farnesyltransferase	ctaB
D4K88_RS00870	*			
D4K88_RS00875	*			
D4K88_RS00880	Q1CRQ1	PSD_HELPH	Phosphatidylserine decarboxylase proenzyme	psd
D4K88_RS00885	Q9ZJN1	NADA_HELPJ	Quinolinate synthase A	nadA
D4K88_RS00890	O25909	NADC_HELPY	Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]	nadC
D4K88_RS00900	P20590	MTH1_HAEIF	Modification methylase HinfI	hinfIM
D4K88_RS00905	*			
D4K88_RS00910	Q44879	CTPA_BARBK	Carboxy-terminal-processing protease	ctpA
D4K88_RS00915	*			
D4K88_RS00920	O25903	PLSC_HELPY	1-acyl-sn-glycerol-3-phosphate acyltransferase	plsC
D4K88_RS00925	B5Z8Z4	UNG_HELPG	Uracil-DNA glycosylase	ung
D4K88_RS00930	*			
D4K88_RS00935	O34425	G3P2_BACSU	Glyceraldehyde-3-phosphate dehydrogenase 2	gapB
D4K88_RS00940	P56154	PGK_HELPY	Phosphoglycerate kinase	pgk
D4K88_RS00945	O25901	CORA_HELPY	Magnesium transport protein CorA	corA
D4K88_RS00950	P43932	Y056_HAEIN	UPF0053 protein HI_0056	ssuA
D4K88_RS00960	O25899	TONB_HELPY	Protein TonB	tonB
D4K88_RS00965	Q9ZJP5	EXBD_HELPJ	Biopolymer transport protein ExbD	exbD
D4K88_RS00970	O25897	EXBB_HELPY	Biopolymer transport protein ExbB	exbB
D4K88_RS00975	O25896	NIKR_HELPY	Putative nickel-responsive regulator	nikR
D4K88_RS00980	Q1CRS1	NADD_HELPH	Probable nicotinate-nucleotide adenylyltransferase	nadD
D4K88_RS00985	*			
D4K88_RS00990	Q9ZJQ0	MNMA_HELPJ	tRNA-specific 2-thiouridylase MnmA	mnmA
D4K88_RS00995	*			
D4K88_RS01000	*			
D4K88_RS01005	O25890	DNAJ_HELPY	Chaperone protein DnaJ	dnaJ
D4K88_RS01010	O25889	Y1331_HELPY	Uncharacterized membrane protein HP_1331	radC
D4K88_RS01015	Q9ZJQ4	YD30_HELPJ	Uncharacterized protein jhp_1250	yczO
D4K88_RS01020	P38054	CUSA_ECOLI	Cation efflux system protein CusA	cusA
D4K88_RS01025	*			
D4K88_RS01030	*			
D4K88_RS01035	*			
D4K88_RS01045	Q9ZJQ9	FUMC_HELPJ	Fumarate hydratase class II	fumC
D4K88_RS01050	*			
D4K88_RS01055	B5Z8X1	RNH2_HELPG	Ribonuclease HII	rnhB
D4K88_RS01060	*			
D4K88_RS01065	*			
D4K88_RS01070	B2UV83	RS10_HELPS	30S ribosomal protein S10	rpsJ
D4K88_RS01075	P56031	RL3_HELPY	50S ribosomal protein L3	rplC
D4K88_RS01080	B2UV81	RL4_HELPS	50S ribosomal protein L4	rplD
D4K88_RS01085	B2UV80	RL23_HELPS	50S ribosomal protein L23	rplW
D4K88_RS01090	B2UV79	RL2_HELPS	50S ribosomal protein L2	rplB
D4K88_RS01095	B2UV78	RS19_HELPS	30S ribosomal protein S19	rpsS
D4K88_RS01100	P56047	RL22_HELPY	50S ribosomal protein L22	rplV
D4K88_RS01105	B2UV76	RS3_HELPS	30S ribosomal protein S3	rpsC
D4K88_RS01110	B2UV75	RL16_HELPS	50S ribosomal protein L16	rplP
D4K88_RS01115	B2UV74	RL29_HELPS	50S ribosomal protein L29	rpmC
D4K88_RS01120	B2UV73	RS17_HELPS	30S ribosomal protein S17	rpsQ
D4K88_RS01125	B2UV72	RL14_HELPS	50S ribosomal protein L14	rplN
D4K88_RS01130	B2UV71	RL24_HELPS	50S ribosomal protein L24	rplX
D4K88_RS01135	B6JNE5	RL5_HELP2	50S ribosomal protein L5	rplE
D4K88_RS01140	B2UV69	RS14Z_HELPS	30S ribosomal protein S14 type Z	rpsZ
D4K88_RS01145	B2UV68	RS8_HELPS	30S ribosomal protein S8	rpsH
D4K88_RS01150	B5Z8V2	RL6_HELPG	50S ribosomal protein L6	rplF
D4K88_RS01155	B5Z8V1	RL18_HELPG	50S ribosomal protein L18	rplR
D4K88_RS01160	B2UV65	RS5_HELPS	30S ribosomal protein S5	rpsE
D4K88_RS01165	B5Z8U9	RL15_HELPG	50S ribosomal protein L15	rplO
D4K88_RS01170	O25879	SECY_HELPY	Protein translocase subunit SecY	secY
D4K88_RS01175	Q9ZJT0	MAP1_HELPJ	Methionine aminopeptidase	map
D4K88_RS01180	P65108	IF1_HELPY	Translation initiation factor IF-1	infA
D4K88_RS01185	B2UV60	RL36_HELPS	50S ribosomal protein L36	rpmJ
D4K88_RS01190	B2UV59	RS13_HELPS	30S ribosomal protein S13	rpsM
D4K88_RS01195	P56018	RS11_HELPY	30S ribosomal protein S11	rpsK
D4K88_RS01200	B2UV57	RS4_HELPS	30S ribosomal protein S4	rpsD
D4K88_RS01205	P56001	RPOA_HELPY	DNA-directed RNA polymerase subunit alpha	rpoA
D4K88_RS01210	B2UV55	RL17_HELPS	50S ribosomal protein L17	rplQ
D4K88_RS01220	*			
D4K88_RS01225	*			
D4K88_RS01230	*			
D4K88_RS01235	*			
D4K88_RS01240	A8KRL3	TENA_HELPX	Aminopyrimidine aminohydrolase	tenA
D4K88_RS01245	A5F0B6	Y473_VIBC3	UPF0312 protein VC0395_0473/VC395_A0785	lpl9
D4K88_RS01250	*			
D4K88_RS01255	P44011	Y523_HAEIN	Putative glycosyltransferase HI_0523	cyp127A1
D4K88_RS01260	*			
D4K88_RS01275	P04393	MTE5_ECOLX	Modification methylase EcoRV	ecoRVM
D4K88_RS01280	*			
D4K88_RS01285	*			
D4K88_RS01290	O25869	TRPE_HELPY	Anthranilate synthase component 1	trpE
D4K88_RS01295	O25868	TRPG_HELPY	Anthranilate synthase component 2	trpG
D4K88_RS01300	B5Z8S5	TRPD_HELPG	Anthranilate phosphoribosyltransferase	trpD
D4K88_RS01305	O25867	TRPC_HELPY	Tryptophan biosynthesis protein TrpCF	trpC
D4K88_RS01310	P56142	TRPB_HELPY	Tryptophan synthase beta chain	trpB
D4K88_RS01315	B6JNB7	TRPA_HELP2	Tryptophan synthase alpha chain	trpA
D4K88_RS01325	P26276	ALGC_PSEAE	Phosphomannomutase/phosphoglucomutase	algC
D4K88_RS01330	*			
D4K88_RS01335	Q17Z65	NUON_HELAH	NADH-quinone oxidoreductase subunit N	nuoN
D4K88_RS01340	P50974	NUOM_RHOCA	NADH-quinone oxidoreductase subunit M	nuoM
D4K88_RS01345	Q9PMA7	NUOL_CAMJE	NADH-quinone oxidoreductase subunit L	nuoL
D4K88_RS01350	B2UV34	NUOK_HELPS	NADH-quinone oxidoreductase subunit K	nuoK
D4K88_RS01355	Q1RKE8	NUOJ_RICBR	NADH-quinone oxidoreductase subunit J	nuoJ
D4K88_RS01360	Q9ZJV9	NUOI_HELPJ	NADH-quinone oxidoreductase subunit I	nuoI
D4K88_RS01365	O25857	NUOH_HELPY	NADH-quinone oxidoreductase subunit H	nuoH
D4K88_RS01370	P56914	NUOG2_RHIME	NADH-quinone oxidoreductase subunit G 2	nuoG2
D4K88_RS01375	*			
D4K88_RS01380	*			
D4K88_RS01385	B6JNA3	NUOD_HELP2	NADH-quinone oxidoreductase subunit D	nuoD
D4K88_RS01390	A5G9B7	NUOC_GEOUR	NADH-quinone oxidoreductase subunit C	nuoC
D4K88_RS01395	B5Z8Q6	NUOB_HELPG	NADH-quinone oxidoreductase subunit B	nuoB
D4K88_RS01400	B3E9W9	NUOA_GEOLS	NADH-quinone oxidoreductase subunit A	nuoA
D4K88_RS01405	O25849	NPD_HELPY	NAD-dependent protein deacylase	cobB
D4K88_RS01410	*			
D4K88_RS01415	P56162	PYRE_HELPY	Orotate phosphoribosyltransferase	pyrE
D4K88_RS01420	Q9ZJX1	RRF_HELPJ	Ribosome-recycling factor	frr
D4K88_RS01425	O25847	SECG_HELPY	Protein-export membrane protein SecG	secG
D4K88_RS01430	*			
D4K88_RS01435	P56396	SYW_HELPY	Tryptophan--tRNA ligase	trpS
D4K88_RS01440	Q8YC41	Y3691_BRUME	Putative binding protein BMEII0691	guaB3
D4K88_RS01445	P0AFU0	YEJB_ECOLI	Inner membrane ABC transporter permease protein YejB	yejB
D4K88_RS01450	*			
D4K88_RS01455	Q1CS13	AROE_HELPH	Shikimate dehydrogenase (NADP(+))	aroE
D4K88_RS01460	P56123	RNR_HELPY	Ribonuclease R	rnr
D4K88_RS01465	O25842	Y1247_HELPY	Protein HP_1247	ybcG
D4K88_RS01470	Q1CS16	RS6_HELPH	30S ribosomal protein S6	rpsF
D4K88_RS01475	Q9ZJY2	SSB_HELPJ	Single-stranded DNA-binding protein	ssb
D4K88_RS01480	B5Z8P0	RS18_HELPG	30S ribosomal protein S18	rpsR
D4K88_RS01485	*			
D4K88_RS01490	*			
D4K88_RS01495	P56452	SYA_HELPY	Alanine--tRNA ligase	alaS
D4K88_RS01500	Q1CS23	NTPP_HELPH	Nucleoside triphosphate pyrophosphatase	maf2
D4K88_RS01510	B5Z8N3	AMIF_HELPG	Formamidase	amiF
D4K88_RS01515	Q9ZJY9	CARA_HELPJ	Carbamoyl-phosphate synthase small chain	carA
D4K88_RS01520	*			
D4K88_RS01525	*			
D4K88_RS01530	O25832	Y1234_HELPY	Uncharacterized transporter HP_1234	ybcG
D4K88_RS01535	*			
D4K88_RS01540	O25830	DHPRS_HELPY	Bifunctional dihydropteroate synthase/dihydropteroate reductase	folP
D4K88_RS01545	P63976	DPO3X_MYCBO	DNA polymerase III subunit gamma/tau	dnaX
D4K88_RS01550	*			
D4K88_RS01555	Q9ZJZ7	AK_HELPJ	Aspartokinase	lysC
D4K88_RS01560	B6JN68	RPPH_HELP2	RNA pyrophosphohydrolase	rppH
D4K88_RS01565	O25825	CY553_HELPY	Cytochrome c-553	cyf
D4K88_RS01570	Q8K928	HEMW_BUCAP	Heme chaperone HemW	hemW
D4K88_RS01575	Q9ZK01	CRCB_HELPJ	Putative fluoride ion transporter CrcB	crcB
D4K88_RS01580	*			
D4K88_RS01585	*			
D4K88_RS01590	*			
D4K88_RS01595	P55984	ISPT_HELPY	Isoprenyl transferase	uppS
D4K88_RS01600	P54591	YHCG_BACSU	Uncharacterized ABC transporter ATP-binding protein YhcG	yhcG
D4K88_RS01605	*			
D4K88_RS01610	O25817	PUR2_HELPY	Phosphoribosylamine--glycine ligase	purD
D4K88_RS01615	*			
D4K88_RS01620	Q12K62	LPTD_SHEDO	LPS-assembly protein LptD	lptD
D4K88_RS01625	*			
D4K88_RS01630	Q1CS51	PNP_HELPH	Polyribonucleotide nucleotidyltransferase	pnp
D4K88_RS01635	B5Z8K9	ATPL_HELPG	ATP synthase subunit c	atpE
D4K88_RS01645	*			
D4K88_RS01650	P71405	CYSE_HELPY	Serine acetyltransferase	cysE
D4K88_RS01660	P24582	MTN3_NEILA	Modification methylase NlaIII	nlaIIIM
D4K88_RS01665	*			
D4K88_RS01670	Q0P9C4	PGLK_CAMJE	Protein glycosylation K	pglK
D4K88_RS01675	*			
D4K88_RS01680	*			
D4K88_RS01685	*			
D4K88_RS01695	P56003	EFTU_HELPY	Elongation factor Tu	tuf
D4K88_RS01700	B2UUW7	RL33_HELPS	50S ribosomal protein L33	rpmG
D4K88_RS01705	*			
D4K88_RS01710	*			
D4K88_RS01715	P55976	NUSG_HELPY	Transcription termination/antitermination protein NusG	nusG
D4K88_RS01720	B2UUW4	RL11_HELPS	50S ribosomal protein L11	rplK
D4K88_RS01725	B6JN40	RL1_HELP2	50S ribosomal protein L1	rplA
D4K88_RS01730	B5Z8J7	RL10_HELPG	50S ribosomal protein L10	rplJ
D4K88_RS01735	B2UUW1	RL7_HELPS	50S ribosomal protein L7/L12	rplL
D4K88_RS01745	Q1CS68	RPOBC_HELPH	Bifunctional DNA-directed RNA polymerase subunit beta-beta'	rpoBC
D4K88_RS01750	B2UUV8	RS12_HELPS	30S ribosomal protein S12	rpsL
D4K88_RS01755	B6JN35	RS7_HELP2	30S ribosomal protein S7	rpsG
D4K88_RS01760	P56002	EFG_HELPY	Elongation factor G	fusA
D4K88_RS01765	P77735	YAJO_ECOLI	1-deoxyxylulose-5-phosphate synthase YajO	yajO
D4K88_RS01775	*			
D4K88_RS01780	Q57336	OPSX_HAEIN	Lipopolysaccharide core heptosyltransferase OpsX	opsX
D4K88_RS01785	Q1CS74	SYH_HELPH	Histidine--tRNA ligase	hisS
D4K88_RS01790	Q9ZK28	DHAS_HELPJ	Aspartate-semialdehyde dehydrogenase	asd
D4K88_RS01795	*			
D4K88_RS01800	*			
D4K88_RS01805	O52538	CAH_PECCA	Carbonic anhydrase	cah
D4K88_RS01810	B6JN25	SOTB_HELP2	Probable sugar efflux transporter	sotB
D4K88_RS01815	*			
D4K88_RS01820	*			
D4K88_RS01825	O31615	YJBQ_BACSU	Putative Na(+)/H(+) antiporter YjbQ	yjbQ
D4K88_RS01830	Q4ZQ35	TTCA_PSEU2	tRNA-cytidine(32) 2-sulfurtransferase	ttcA
D4K88_RS01835	P77726	YAJR_ECOLI	Inner membrane transport protein YajR	yajR
D4K88_RS01845	O25792	NUPC_HELPY	Nucleoside permease NupC	nupC
D4K88_RS01850	P56195	DEOB_HELPY	Phosphopentomutase	deoB
D4K88_RS01855	B6JN17	DEOD_HELP2	Purine nucleoside phosphorylase DeoD-type	deoD
D4K88_RS01865	*			
D4K88_RS01870	P31440	ADEQ_ECOLI	Adenine permease AdeQ	adeQ
D4K88_RS01875	O25788	GLUP_HELPY	Putative glucose/galactose transporter	gluP
D4K88_RS01880	*			
D4K88_RS01885	*			
D4K88_RS01890	P54537	ARTM_BACSU	Arginine transport ATP-binding protein ArtM	artM
D4K88_RS01895	P41083	GLNP_RICPR	Putative glutamine transport system permease protein GlnP	glnP
D4K88_RS01900	P52625	PATM_VIBHA	Probable amino-acid ABC transporter permease protein PatM	patM
D4K88_RS01905	P56190	CSTA_HELPY	Peptide transporter CstA	cstA
D4K88_RS01910	*			
D4K88_RS01915	Q1CSA0	G6PI_HELPH	Glucose-6-phosphate isomerase	pgi
D4K88_RS01920	*			
D4K88_RS01925	B1ICY3	FENR_STRPI	Ferredoxin--NADP reductase	petH
D4K88_RS01930	*			
D4K88_RS01935	*			
D4K88_RS01940	Q9ZK53	FLAV_HELPJ	Flavodoxin	fldA
D4K88_RS01945	B5Z8F5	YBEY_HELPG	Endoribonuclease YbeY	ybeY
D4K88_RS01950	P44088	Y977_HAEIN	Probable protein adenylyltransferase HI_0977	aadA
D4K88_RS01955	Q9ZK56	P5CR_HELPJ	Pyrroline-5-carboxylate reductase	proC
D4K88_RS01960	*			
D4K88_RS01965	*			
D4K88_RS01970	B2UUR4	MURG_HELPS	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase	murG
D4K88_RS01975	B5Z8F0	FLIW_HELPG	Flagellar assembly factor FliW	fliW
D4K88_RS01980	P56000	SYV_HELPY	Valine--tRNA ligase	valS
D4K88_RS01985	P56005	SRP54_HELPY	Signal recognition particle protein	ffh
D4K88_RS01990	B2UUR0	RS16_HELPS	30S ribosomal protein S16	rpsP
D4K88_RS01995	*			
D4K88_RS02000	O25767	RIMM_HELPY	Ribosome maturation factor RimM	rimM
D4K88_RS02005	O25766	TRMD_HELPY	tRNA (guanine-N(1)-)-methyltransferase	trmD
D4K88_RS02010	B2UUQ6	RL19_HELPS	50S ribosomal protein L19	rplS
D4K88_RS02025	*			
D4K88_RS02030	*			
D4K88_RS02040	Q1CSC6	FMT_HELPH	Methionyl-tRNA formyltransferase	fmt
D4K88_RS02045	Q5F5C8	BICOA_NEIG1	Bifunctional enzyme BirA/CoaX	birA/coaX
D4K88_RS02050	P37522	SOJ_BACSU	Sporulation initiation inhibitor protein Soj	soj
D4K88_RS02055	O25758	PARB_HELPY	Probable chromosome-partitioning protein ParB	parB
D4K88_RS02060	*			
D4K88_RS02065	B2UUP4	ATPF_HELPS	ATP synthase subunit b	atpF
D4K88_RS02070	*			
D4K88_RS02075	B6JMX4	ATPA_HELP2	ATP synthase subunit alpha	atpA
D4K88_RS02080	Q9ZK80	ATPG_HELPJ	ATP synthase gamma chain	atpG
D4K88_RS02085	B6JMX2	ATPB_HELP2	ATP synthase subunit beta	atpD
D4K88_RS02090	P56084	ATPE_HELPY	ATP synthase epsilon chain	atpC
D4K88_RS02095	Q9ZK83	EXBL1_HELPJ	Putative biopolymer transport protein ExbB-like 1	exbD
D4K88_RS02100	O25754	EXDL1_HELPY	Putative biopolymer transport protein ExbD-like 1	exc
D4K88_RS02105	*			
D4K88_RS02110	Q1CSE0	TOLB_HELPH	Tol-Pal system protein TolB	tolB
D4K88_RS02115	P0A138	PAL_PSEPK	Peptidoglycan-associated lipoprotein	pal
D4K88_RS02120	*			
D4K88_RS02125	O25748	SLYD_HELPY	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD	slyD
D4K88_RS02130	*			
D4K88_RS02135	*			
D4K88_RS02140	Q59603	MTB1_NEIGO	Modification methylase NgoBI	ngoBIM
D4K88_RS02145	*			
D4K88_RS02150	Q44767	FLGE_BORBU	Flagellar hook protein FlgE	flgE
D4K88_RS02155	P18956	GGT_ECOLI	Glutathione hydrolase proenzyme	ggt
D4K88_RS02165	P59696	T200_SALTY	Transposase for insertion sequence element IS200	tnpA6
D4K88_RS02170	P54992	YSNA_STRPR	Putative transposase in snaA-snaB intergenic region	ysmB
D4K88_RS02175	*			
D4K88_RS02180	*			
D4K88_RS02190	*			
D4K88_RS02200	*			
D4K88_RS02205	B5Z7N7	RUVC_HELPG	Crossover junction endodeoxyribonuclease RuvC	ruvC
D4K88_RS02220	P77872	CATA_HELPY	Catalase	katA
D4K88_RS02225	*			
D4K88_RS02230	*			
D4K88_RS02235	P0AFJ1	YJDM_ECOLI	Protein YjdM	yjdM
D4K88_RS02240	*			
D4K88_RS02245	Q9ZKX9	CDH_HELPJ	CDP-diacylglycerol pyrophosphatase	cdh
D4K88_RS02250	Q9ZKY0	FLGE_HELPJ	Flagellar hook protein FlgE	flgE
D4K88_RS02255	P0A0U4	HYPA_HELPY	Hydrogenase/urease maturation factor HypA	hypA
D4K88_RS02260	*			
D4K88_RS02265	Q9ZKY2	LPXB_HELPJ	Lipid-A-disaccharide synthase	lpxB
D4K88_RS02270	B5Z7M6	GREA_HELPG	Transcription elongation factor GreA	greA
D4K88_RS02275	O25536	DUT_HELPY	Deoxyuridine 5'-triphosphate nucleotidohydrolase	dut
D4K88_RS02280	*			
D4K88_RS02285	O25534	PGBB_HELPY	Plasminogen-binding protein PgbB	pgbB
D4K88_RS02290	O25533	COAX_HELPY	Type III pantothenate kinase	coaX
D4K88_RS02295	*			
D4K88_RS02300	O25531	GMHBB_HELPY	D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase	gmhB
D4K88_RS02305	A3QJB2	HLDD_SHELP	ADP-L-glycero-D-manno-heptose-6-epimerase	hldD
D4K88_RS02310	Q1CT14	HLDE_HELPH	Bifunctional protein HldE	hldE
D4K88_RS02315	O25528	GMHA_HELPY	Phosphoheptose isomerase	gmhA
D4K88_RS02320	*			
D4K88_RS02325	Q9ZKZ2	GUAC_HELPJ	GMP reductase	guaC
D4K88_RS02330	O31716	YKPA_BACSU	Uncharacterized ABC transporter ATP-binding protein YkpA	ykpA
D4K88_RS02335	*			
D4K88_RS02340	O34349	PGPB_BACSU	Phosphatidylglycerophosphatase B	pgpB
D4K88_RS02350	Q47163	T1MP_ECOLX	Type I restriction enzyme EcoprrI M protein	hsdM
D4K88_RS02355	P75279	T1SB_MYCPN	Putative type-1 restriction enzyme specificity protein MPN_507	hsdS
D4K88_RS02360	P10486	T1R1_ECOLX	Type I restriction enzyme EcoR124II R protein	hsdR
D4K88_RS02365	O25516	THIM_HELPY	Hydroxyethylthiazole kinase	thiM
D4K88_RS02370	O25515	THID_HELPY	Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase	thiD
D4K88_RS02375	Q1CT27	THIE_HELPH	Thiamine-phosphate synthase	thiE
D4K88_RS02380	*			
D4K88_RS02385	O35033	COABC_BACSU	Coenzyme A biosynthesis bifunctional protein CoaBC	coaBC
D4K88_RS02390	O25511	PSEB_HELPY	UDP-N-acetylglucosamine 4,6-dehydratase (inverting)	pseB
D4K88_RS02395	*			
D4K88_RS02400	*			
D4K88_RS02405	*			
D4K88_RS02415	O25506	DBH_HELPY	DNA-binding protein HU	hup
D4K88_RS02420	B6JM65	DER_HELP2	GTPase Der	der
D4K88_RS02425	*			
D4K88_RS02435	Q9ZL12	COAE_HELPJ	Dephospho-CoA kinase	coaE
D4K88_RS02440	Q1CT39	GATA_HELPH	Glutamyl-tRNA(Gln) amidotransferase subunit A	gatA
D4K88_RS02445	P56088	IMDH_HELPY	Inosine-5'-monophosphate dehydrogenase	guaB
D4K88_RS02450	B6JM59	ATP6_HELP2	ATP synthase subunit a	atpB
D4K88_RS02455	Q9WX37	RBPE_NOSS1	Putative RNA-binding protein RbpE	rbpE
D4K88_RS02460	*			
D4K88_RS02465	P56431	TRXB_HELPY	Thioredoxin reductase	trxB
D4K88_RS02470	P66928	THIO_HELPY	Thioredoxin	trxA
D4K88_RS02475	Q9ZL19	Y823_HELPJ	UPF0102 protein jhp_0762	sseC2
D4K88_RS02480	P56429	DHOM_HELPY	Homoserine dehydrogenase	hom
D4K88_RS02485	P56428	UVRC_HELPY	UvrABC system protein C	uvrC
D4K88_RS02490	*			
D4K88_RS02495	*			
D4K88_RS02500	Q45460	OPUBA_BACSU	Choline transport ATP-binding protein OpuBA	opuBA
D4K88_RS02505	O32243	OPUCC_BACSU	Glycine betaine/carnitine/choline-binding protein OpuCC	opuCC
D4K88_RS02510	*			
D4K88_RS02515	Q9ZL29	MOTB_HELPJ	Motility protein B	motB
D4K88_RS02520	P65410	MOTA_HELPY	Motility protein A	motA
D4K88_RS02525	Q72J02	TTUC_THET2	Sulfur carrier protein adenylyltransferase	ttuC
D4K88_RS02530	Q49649	Y493_MYCLE	Uncharacterized protein ML0493	yeiF
D4K88_RS02535	*			
D4K88_RS02540	*			
D4K88_RS02545	*			
D4K88_RS02550	O67712	FLIL_AQUAE	Flagellar protein FliL	fliL
D4K88_RS02555	B5Z7H0	ACPS_HELPG	Holo-[acyl-carrier-protein] synthase	acpS
D4K88_RS02560	*			
D4K88_RS02565	*			
D4K88_RS02570	*			
D4K88_RS02575	Q9ZL40	RIBB_HELPJ	3,4-dihydroxy-2-butanone 4-phosphate synthase	ribB
D4K88_RS02580	*			
D4K88_RS02585	B6JM32	RIBA_HELP2	GTP cyclohydrolase-2	ribA
D4K88_RS02590	*			
D4K88_RS02595	P56422	MOAE_HELPY	Molybdopterin synthase catalytic subunit	moaE
D4K88_RS02600	P56421	MOG_HELPY	Molybdopterin adenylyltransferase	mog
D4K88_RS02605	B5Z7G0	MOAC_HELPG	Cyclic pyranopterin monophosphate synthase	moaC
D4K88_RS02610	P55969	HPAA_HELPY	Neuraminyllactose-binding hemagglutinin	hpaA
D4K88_RS02615	*			
D4K88_RS02620	B6JM26	TIG_HELP2	Trigger factor	tig
D4K88_RS02625	P56156	CLPP_HELPY	ATP-dependent Clp protease proteolytic subunit	clpP
D4K88_RS02630	B5Z7F5	DEF_HELPG	Peptide deformylase	def
D4K88_RS02635	P45049	COMM_HAEIN	Competence protein ComM	comM
D4K88_RS02640	Q59465	HMCT_HELPY	Cadmium, zinc and cobalt-transporting ATPase	cadA
D4K88_RS02645	P71344	T1SI_HAEIN	Putative type I restriction enzyme specificity protein HI_0216	hsdS
D4K88_RS02650	*			
D4K88_RS02655	*			
D4K88_RS02660	B6JM18	SECA_HELP2	Protein translocase subunit SecA	secA
D4K88_RS02665	O25474	LOLA_HELPY	Outer-membrane lipoprotein carrier protein	lolA
D4K88_RS02675	*			
D4K88_RS02680	*			
D4K88_RS02685	*			
D4K88_RS02690	*			
D4K88_RS02695	P56418	ACNB_HELPY	Aconitate hydratase B	acnB
D4K88_RS02700	*			
D4K88_RS02705	P56106	PYRH_HELPY	Uridylate kinase	pyrH
D4K88_RS02710	P60325	RPOZ_HELPY	DNA-directed RNA polymerase subunit omega	rpoZ
D4K88_RS02715	Q54089	RELA_STREQ	Bifunctional (p)ppGpp synthase/hydrolase RelA	relA
D4K88_RS02720	P56417	SYY_HELPY	Tyrosine--tRNA ligase	tyrS
D4K88_RS02725	*			
D4K88_RS02730	P26365	AMIB_ECOLI	N-acetylmuramoyl-L-alanine amidase AmiB	amiB
D4K88_RS02735	*			
D4K88_RS02740	P56416	FLHB_HELPY	Flagellar biosynthetic protein FlhB	flhB
D4K88_RS02745	B6JM02	MOBA_HELP2	Molybdenum cofactor guanylyltransferase	mobA
D4K88_RS02750	B6JM01	MOAA_HELP2	GTP 3',8-cyclase	moaA
D4K88_RS02755	*			
D4K88_RS02760	O25458	FTSY_HELPY	Signal recognition particle receptor FtsY	ftsY
D4K88_RS02765	*			
D4K88_RS02770	*			
D4K88_RS02775	Q1CTB0	RNY_HELPH	Ribonuclease Y	rny
D4K88_RS02780	Q9WZS2	NORM_THEMA	Probable multidrug resistance protein NorM	norM
D4K88_RS02785	P44640	Y325_HAEIN	Uncharacterized membrane protein HI_0325	ygfB
D4K88_RS02790	P60327	DCAS_AGRSK	N-carbamoyl-D-amino acid hydrolase	pcaC
D4K88_RS02800	P9WMN6	MOEZ_MYCTO	Probable adenylyltransferase/sulfurtransferase MoeZ	moeZ
D4K88_RS02805	*			
D4K88_RS02810	P0DPD3	FLIS_CAMJ8	Flagellar secretion chaperone FliS	fliS
D4K88_RS02820	*			
D4K88_RS02825	*			
D4K88_RS02830	*			
D4K88_RS02835	Q5YRD1	METN_NOCFA	Methionine import ATP-binding protein MetN	metN
D4K88_RS02840	Q1CTC3	TRMB_HELPH	tRNA (guanine-N(7)-)-methyltransferase	trmB
D4K88_RS02845	*			
D4K88_RS02850	Q9ZL98	Y745_HELPJ	Uncharacterized RNA pseudouridine synthase jhp_0682	metK1
D4K88_RS02855	B7GGD6	RBGA_ANOFW	Ribosome biogenesis GTPase A	rbgA
D4K88_RS02865	P56098	RODA_HELPY	Peptidoglycan glycosyltransferase MrdB	mrdB
D4K88_RS02875	P56184	KPRS_HELPY	Ribose-phosphate pyrophosphokinase	prs
D4K88_RS02880	P9WMK8	AP4A_MYCTO	AP-4-A phosphorylase	aotP
D4K88_RS02885	P96613	MURF_BACSU	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase	murF
D4K88_RS02890	*			
D4K88_RS02895	P56191	DDL_HELPY	D-alanine--D-alanine ligase	ddl
D4K88_RS02900	P18200	PGPA_ECOLI	Phosphatidylglycerophosphatase A	pgpA
D4K88_RS02905	Q9ZLA7	Y736_HELPJ	Uncharacterized aminotransferase jhp_0673	metK1
D4K88_RS02910	Q5QW45	XGPT_IDILO	Xanthine-guanine phosphoribosyltransferase	gpt
D4K88_RS02915	Q9ZLA9	RIMO_HELPJ	Ribosomal protein S12 methylthiotransferase RimO	rimO
D4K88_RS02925	*			
D4K88_RS02930	*			
D4K88_RS02935	*			
D4K88_RS02940	*			
D4K88_RS02945	O25428	TILS_HELPY	tRNA(Ile)-lysidine synthase	tilS
D4K88_RS02950	Q9ZLB6	DUS_HELPJ	Probable tRNA-dihydrouridine synthase	dus
D4K88_RS02955	*			
D4K88_RS02960	*			
D4K88_RS02965	Q9ZLB9	ASPG_HELPJ	Probable L-asparaginase	ansA
D4K88_RS02970	O25425	DCUA_HELPY	Anaerobic C4-dicarboxylate transporter DcuA	dcuA
D4K88_RS02975	*			
D4K88_RS02980	*			
D4K88_RS02985	*			
D4K88_RS02990	*			
D4K88_RS02995	P52047	YGGA_AERHY	Putative amino-acid transporter YggA	ygfZ
D4K88_RS03000	P43746	DPO3X_HAEIN	DNA polymerase III subunit tau/gamma	dnaX
D4K88_RS03005	*			
D4K88_RS03010	P0A9V1	LPTB_ECOLI	Lipopolysaccharide export system ATP-binding protein LptB	lptB
D4K88_RS03015	P56143	RP54_HELPY	RNA polymerase sigma-54 factor	rpoN
D4K88_RS03020	O66426	YZ38_AQUAE	Probable protein adenylyltransferase aq_aa38	yyzN
D4K88_RS03025	*			
D4K88_RS03030	*			
D4K88_RS03035	A4X3Q0	SALL_SALTO	Adenosyl-chloride synthase	salL
D4K88_RS03040	*			
D4K88_RS03045	O25411	RSMH_HELPY	Ribosomal RNA small subunit methyltransferase H	rsmH
D4K88_RS03050	*			
D4K88_RS03055	P56474	UVRA_HELPY	UvrABC system protein A	uvrA
D4K88_RS03065	O25408	FLGR_HELPY	Transcriptional regulatory protein FlgR	flgR
D4K88_RS03070	*			
D4K88_RS03075	Q9ZLD9	GYRA_HELPJ	DNA gyrase subunit A	gyrA
D4K88_RS03080	Q9ZLE0	KDGL_HELPJ	Diacylglycerol kinase	dgkA
D4K88_RS03085	*			
D4K88_RS03090	*			
D4K88_RS03095	Q8RM02	ACXC_XANP2	Acetone carboxylase gamma subunit	acxC
D4K88_RS03100	Q8RM03	ACXB_XANP2	Acetone carboxylase alpha subunit	acxB
D4K88_RS03105	Q8RM04	ACXA_XANP2	Acetone carboxylase beta subunit	acxA
D4K88_RS03110	*			
D4K88_RS03115	P44051	ATOE_HAEIN	Putative short-chain fatty acid transporter	atoE
D4K88_RS03120	P56007	SCOB_HELPY	Succinyl-CoA:3-ketoacid coenzyme A transferase subunit B	scoB
D4K88_RS03125	Q9ZLE3	SCOA_HELPJ	Succinyl-CoA:3-ketoacid coenzyme A transferase subunit A	scoA
D4K88_RS03130	P45359	THLA_CLOAB	Acetyl-CoA acetyltransferase	thlA
D4K88_RS03135	*			
D4K88_RS03140	O25396	FEOB_HELPY	Fe(2+) transporter FeoB	feoB
D4K88_RS03145	*			
D4K88_RS03150	P35528	FLIP_BACSU	Flagellar biosynthetic protein FliP	fliP
D4K88_RS03155	*			
D4K88_RS03160	O25393	GLMU_HELPY	Bifunctional protein GlmU	glmU
D4K88_RS03165	*			
D4K88_RS03170	*			
D4K88_RS03175	P55982	RIR1_HELPY	Ribonucleoside-diphosphate reductase subunit alpha	nrdA
D4K88_RS03180	*			
D4K88_RS03185	P44070	Y902_HAEIN	Probable membrane transporter protein HI_0902	fadE10
D4K88_RS03190	P0A697	OGT_MYCBO	Methylated-DNA--protein-cysteine methyltransferase	ogt
D4K88_RS03195	O25386	XERH_HELPY	Tyrosine recombinase XerH	xerH
D4K88_RS03205	*			
D4K88_RS03210	Q59228	AAT_GEOSE	Aspartate aminotransferase	aspC
D4K88_RS03215	*			
D4K88_RS03220	*			
D4K88_RS03230	B7JF51	LUTA2_BACC0	Lactate utilization protein A 2	lutA2
D4K88_RS03235	O25376	HEMN_HELPY	Oxygen-independent coproporphyrinogen III oxidase	hemN
D4K88_RS03240	B6JLQ2	Y677_HELP2	UPF0763 protein HPP12_0677	metK1
D4K88_RS03245	B6JLQ1	AROC_HELP2	Chorismate synthase	aroC
D4K88_RS03250	P56118	RNC_HELPY	Ribonuclease 3	rnc
D4K88_RS03255	Q9ZLH3	RNH_HELPJ	Ribonuclease HI	rnhA
D4K88_RS03260	*			
D4K88_RS03265	*			
D4K88_RS03270	O25372	GATB_HELPY	Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B	gatB
D4K88_RS03275	*			
D4K88_RS03280	Q9XAP2	MQNC_STRCO	Cyclic dehypoxanthine futalosine synthase	mqnC
D4K88_RS03285	O25369	BAMA_HELPY	Outer membrane protein assembly factor BamA	bamA
D4K88_RS03290	Q5SK48	MQNE_THET8	Aminodeoxyfutalosine synthase	mqnE
D4K88_RS03295	P52093	FTN_HELPY	Bacterial non-heme ferritin	ftnA
D4K88_RS03300	Q7M7U5	SERB_WOLSU	Phosphoserine phosphatase	SERB
D4K88_RS03310	*			
D4K88_RS03315	Q9ZLI5	ASPA_HELPJ	Aspartate ammonia-lyase	aspA
D4K88_RS03320	B2UTH9	MURA_HELPS	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	murA
D4K88_RS03325	*			
D4K88_RS03330	Q9I291	GALU_PSEAE	UTP--glucose-1-phosphate uridylyltransferase	galU
D4K88_RS03335	C5BCE9	MLTC_EDWI9	Membrane-bound lytic murein transglycosylase C	mltC
D4K88_RS03340	*			
D4K88_RS03345	B5Z716	SYE2_HELPG	Glutamate--tRNA ligase 2	gltX2
D4K88_RS03350	Q4L920	Y546_STAHJ	Putative NAD(P)H nitroreductase SH0546	metK1
D4K88_RS03355	P0A9V8	SQUU_ECOLI	3-sulfolactaldehyde reductase	yihU
D4K88_RS03365	B6JLM6	QUEC_HELP2	7-cyano-7-deazaguanine synthase	queC
D4K88_RS03370	*			
D4K88_RS03375	*			
D4K88_RS03380	*			
D4K88_RS03385	P31877	HYDE_WOLSU	Protein HydE	hydE
D4K88_RS03390	P31876	HYDD_WOLSU	Protein HydD	hydD
D4K88_RS03395	P31875	CYBH_WOLSU	Quinone-reactive Ni/Fe-hydrogenase B-type cytochrome subunit	hydC
D4K88_RS03400	P31883	MBHL_WOLSU	Quinone-reactive Ni/Fe-hydrogenase large chain	hydB
D4K88_RS03405	P31884	MBHS_WOLSU	Quinone-reactive Ni/Fe-hydrogenase small chain	hydA
D4K88_RS03410	P44803	MDAB_HAEIN	NADPH:quinone oxidoreductase MdaB	mdaB
D4K88_RS03415	*			
D4K88_RS03420	*			
D4K88_RS03425	O25343	DAPD_HELPY	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	dapD
D4K88_RS03430	Q1CTP7	ISPG_HELPH	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin)	ispG
D4K88_RS03435	P16524	DAPX_BACSU	Probable N-acetyl-LL-diaminopimelate aminotransferase	dapX
D4K88_RS03440	Q9ZLL2	MURC_HELPJ	UDP-N-acetylmuramate--L-alanine ligase	murC
D4K88_RS03445	*			
D4K88_RS03450	O25338	MUTS2_HELPY	Endonuclease MutS2	mutS2
D4K88_RS03455	Q9ZLL5	IPYR_HELPJ	Inorganic pyrophosphatase	ppa
D4K88_RS03465	*			
D4K88_RS03470	P56104	KAD_HELPY	Adenylate kinase	adk
D4K88_RS03475	Q1CTQ7	SYDND_HELPH	Aspartate--tRNA(Asp/Asn) ligase	aspS
D4K88_RS03480	O25337	CHEV2_HELPY	Chemotaxis protein CheV2	cheV2
D4K88_RS03485	Q1CTQ9	DNLJ_HELPH	DNA ligase	ligA
D4K88_RS03490	*			
D4K88_RS03495	O07016	YVFR_BACSU	Uncharacterized ABC transporter ATP-binding protein YvfR	yvfR
D4K88_RS03500	*			
D4K88_RS03505	*			
D4K88_RS03510	*			
D4K88_RS03515	*			
D4K88_RS03520	P25197	NOLG_RHIME	Nodulation protein NolG	nolG
D4K88_RS03525	*			
D4K88_RS03530	*			
D4K88_RS03535	O25325	DCUP_HELPY	Uroporphyrinogen decarboxylase	hemE
D4K88_RS03540	*			
D4K88_RS03545	*			
D4K88_RS03550	P0A0S1	FLAA_HELPY	Flagellin A	flaA
D4K88_RS03565	P15492	HLYB_VIBCH	Methyl-accepting chemotaxis protein HlyB	hlyB
D4K88_RS03570	O25320	BIOF_HELPY	8-amino-7-oxononanoate synthase	bioF
D4K88_RS03575	O66874	PBPA_AQUAE	Penicillin-binding protein 1A	mrcA
D4K88_RS03580	*			
D4K88_RS03595	*			
D4K88_RS03600	*			
D4K88_RS03605	P12364	T3MO_ECOLX	Type III restriction-modification system EcoP15I enzyme mod	mod
D4K88_RS03610	P25241	T3RE_BACC1	Type III restriction-modification system Bce10987IP enzyme res	res
D4K88_RS03615	*			
D4K88_RS03620	O53181	KORB_MYCTU	2-oxoglutarate oxidoreductase subunit KorB	korB
D4K88_RS03625	O53182	KORA_MYCTU	2-oxoglutarate oxidoreductase subunit KorA	korA
D4K88_RS03630	*			
D4K88_RS03635	*			
D4K88_RS03640	*			
D4K88_RS03645	P57798	FEOA_HELPY	Putative Fe(2+) transport protein A	feoA
D4K88_RS03650	P73715	END3_SYNY3	Endonuclease III	nth
D4K88_RS03655	P24073	FLIY_BACSU	Flagellar motor switch phosphatase FliY	fliY
D4K88_RS03660	*			
D4K88_RS03665	*			
D4K88_RS03670	B2UTP7	PYRC_HELPS	Dihydroorotase	pyrC
D4K88_RS03675	*			
D4K88_RS03680	*			
D4K88_RS03685	*			
D4K88_RS03690	Q1CTU9	FOLD_HELPH	Bifunctional protein FolD	folD
D4K88_RS03695	O25300	LEP_HELPY	Signal peptidase I	lepB
D4K88_RS03700	P70995	YWHC_BACSU	Putative zinc metalloprotease YwhC	ywhC
D4K88_RS03705	P39156	YWLF_BACSU	Putative sugar phosphate isomerase YwlF	ywlF
D4K88_RS03710	*			
D4K88_RS03715	B2UTQ6	APT_HELPS	Adenine phosphoribosyltransferase	apt
D4K88_RS03720	*			
D4K88_RS03725	Q1CTV6	AMPA_HELPH	Probable cytosol aminopeptidase	pepA
D4K88_RS03730	P37518	YCHF_BACSU	Ribosome-binding ATPase YchF	ychF
D4K88_RS03735	*			
D4K88_RS03740	O25291	Y567_HELPY	Putative transport protein HP_0567	metK1
D4K88_RS03745	B6JLE8	DAPF_HELP2	Diaminopimelate epimerase	dapF
D4K88_RS03750	P46928	YKGB_MANHA	Uncharacterized 23.0 kDa protein in purT/mpa1 5'region	ykgA
D4K88_RS03755	*			
D4K88_RS03760	*			
D4K88_RS03765	B2UTR6	RS21_HELPS	30S ribosomal protein S21	rpsU
D4K88_RS03770	P0AEK2	FABG_ECOLI	3-oxoacyl-[acyl-carrier-protein] reductase FabG	fabG
D4K88_RS03775	P56464	ACP_HELPY	Acyl carrier protein	acpP
D4K88_RS03780	Q83E37	FABF_COXBU	3-oxoacyl-[acyl-carrier-protein] synthase 2	fabF
D4K88_RS03785	B2UTS1	ACCA_HELPS	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha	accA
D4K88_RS03795	*			
D4K88_RS03800	*			
D4K88_RS03805	*			
D4K88_RS03810	P94538	YSGA_BACSU	Uncharacterized tRNA/rRNA methyltransferase YsgA	ysgA
D4K88_RS03815	P56204	RSMI_HELPY	Ribosomal RNA small subunit methyltransferase I	rsmI
D4K88_RS03820	B2UTS9	RL31_HELPS	50S ribosomal protein L31	rpmE
D4K88_RS03825	Q9ZLS9	RHO_HELPJ	Transcription termination factor Rho	rho
D4K88_RS03830	B6JLD2	MURI_HELP2	Glutamate racemase	murI
D4K88_RS03840	*			
D4K88_RS03845	B6JL99	ERA_HELP2	GTPase Era	era
D4K88_RS03850	B5Z6N9	HSLU_HELPG	ATP-dependent protease ATPase subunit HslU	hslU
D4K88_RS03855	O25253	HSLV_HELPY	ATP-dependent protease subunit HslV	hslV
D4K88_RS03860	Q9ZLW3	RL9_HELPJ	50S ribosomal protein L9	rplI
D4K88_RS03865	P44169	Y1375_HAEIN	Uncharacterized protein HI_1375	fabG2
D4K88_RS03870	P94845	GLN1B_HELPY	Glutamine synthetase	glnA
D4K88_RS03875	*			
D4K88_RS03880	B5Z6N2	DAPB_HELPG	4-hydroxy-tetrahydrodipicolinate reductase	dapB
D4K88_RS03885	P94535	GLCD_BACSU	Glycolate oxidase subunit GlcD	glcD
D4K88_RS03890	O25249	PGBA_HELPY	Plasminogen-binding protein PgbA	pgbA
D4K88_RS03895	*			
D4K88_RS03900	O31976	YOMI_BACSU	SPbeta prophage-derived uncharacterized transglycosylase YomI	yomI
D4K88_RS03910	*			
D4K88_RS03915	P55992	GYRB_HELPY	DNA gyrase subunit B	gyrB
D4K88_RS03920	O25242	DPO3B_HELPY	Beta sliding clamp	dnaN
D4K88_RS03925	Q9K0U7	PA1_NEIMB	Putative phospholipase A1	pldA
D4K88_RS03930	O07577	YHDH_BACSU	Uncharacterized sodium-dependent transporter YhdH	yhdH
D4K88_RS03935	O07577	YHDH_BACSU	Uncharacterized sodium-dependent transporter YhdH	yhdH
D4K88_RS03940	P94842	YBGC_HELPY	Acyl-CoA thioesterase YbgC	ybgC
D4K88_RS03945	Q9ZLX9	Y495_HELPJ	Uncharacterized protein jhp_0447	yeiF
D4K88_RS03950	B5Z6L9	MURD_HELPG	UDP-N-acetylmuramoylalanine--D-glutamate ligase	murD
D4K88_RS03955	Q1CU36	MRAY_HELPH	Phospho-N-acetylmuramoyl-pentapeptide-transferase	mraY
D4K88_RS03960	*			
D4K88_RS03965	B2UTZ5	RL28_HELPS	50S ribosomal protein L28	rpmB
D4K88_RS03970	*			
D4K88_RS03975	*			
D4K88_RS03980	*			
D4K88_RS03990	*			
D4K88_RS03995	*			
D4K88_RS04000	*			
D4K88_RS04020	P94147	MTA1_THAGE	Modification methylase AgeI	ageIM
D4K88_RS04025	*			
D4K88_RS04030	*			
D4K88_RS04035	*			
D4K88_RS04040	O25225	BIPA_HELPY	50S ribosomal subunit assembly factor BipA	bipA
D4K88_RS04045	*			
D4K88_RS04050	Q03055	MTV1_VIBS3	Modification methylase VspI	vspIM
D4K88_RS04055	*			
D4K88_RS04060	B6JL62	SYE1_HELP2	Glutamate--tRNA ligase 1	gltX1
D4K88_RS04065	Q0SRL2	POTA_CLOPS	Spermidine/putrescine import ATP-binding protein PotA	potA
D4K88_RS04070	Q08382	MODB_RHOCA	Molybdenum transport system permease protein ModB	modB
D4K88_RS04075	P37734	MODA_AZOVI	Molybdate-binding protein ModA	modA
D4K88_RS04080	*			
D4K88_RS04085	*			
D4K88_RS04095	P44933	KEFX_HAEIN	Glutathione-regulated potassium-efflux system protein	kefBC
D4K88_RS04100	*			
D4K88_RS04105	*			
D4K88_RS04110	*			
D4K88_RS04115	*			
D4K88_RS04120	*			
D4K88_RS04125	*			
D4K88_RS04140	*			
D4K88_RS04150	O25654	PPK1_HELPY	Polyphosphate kinase	ppk
D4K88_RS04155	B5Z6I2	PYRD_HELPG	Dihydroorotate dehydrogenase (quinone)	pyrD
D4K88_RS04160	*			
D4K88_RS04165	O25657	DAPA_HELPY	4-hydroxy-tetrahydrodipicolinate synthase	dapA
D4K88_RS04170	P71079	FABL_BACSU	Enoyl-[acyl-carrier-protein] reductase [NADPH] FabL	fabL
D4K88_RS04175	*			
D4K88_RS04180	Q6D364	PGSA_PECAS	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	pgsA
D4K88_RS04185	O31462	YBGF_BACSU	Uncharacterized amino acid permease YbgF	ybgF
D4K88_RS04190	P18584	DEGPL_CHLTR	Probable periplasmic serine endoprotease DegP-like	htrA
D4K88_RS04195	B6JL03	ISPDF_HELP2	Bifunctional enzyme IspD/IspF	ispDF
D4K88_RS04200	P45189	PHOB_HAEIN	Phosphate regulon transcriptional regulatory protein PhoB	phoB
D4K88_RS04205	*			
D4K88_RS04210	O51498	DPO1_BORBU	DNA polymerase I	polA
D4K88_RS04215	P59696	T200_SALTY	Transposase for insertion sequence element IS200	tnpA6
D4K88_RS04220	P54992	YSNA_STRPR	Putative transposase in snaA-snaB intergenic region	ysmB
D4K88_RS04225	*			
D4K88_RS04230	Q56237	DNAJ2_THET8	Chaperone protein DnaJ 2	dnaJ2
D4K88_RS04235	P40183	HSPR_STRCO	Putative heat shock protein HspR	hspR
D4K88_RS04240	Q9WYX8	Y508_THEMA	Uncharacterized protein TM_0508	cyp127A1
D4K88_RS04245	O25671	FUR_HELPY	Ferric uptake regulation protein	fur
D4K88_RS04250	*			
D4K88_RS04255	*			
D4K88_RS04260	P24073	FLIY_BACSU	Flagellar motor switch phosphatase FliY	fliY
D4K88_RS04265	P74927	FLIM_TREPA	Flagellar motor switch protein FliM	fliM
D4K88_RS04270	P0A2E8	FLIA_SALTY	RNA polymerase sigma factor FliA	fliA
D4K88_RS04275	*			
D4K88_RS04280	O25678	YLXH_HELPY	Flagellum site-determining protein YlxH	ylxH
D4K88_RS04285	O25679	FLHF_HELPY	Flagellar biosynthesis protein FlhF	flhF
D4K88_RS04290	O25680	HPPK_HELPY	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase	folK
D4K88_RS04295	O25681	AMPEP_HELPY	Aminopeptidase HP_1037	ampD
D4K88_RS04300	B5Z6F6	AROQ_HELPG	3-dehydroquinate dehydratase	aroQ
D4K88_RS04305	*			
D4K88_RS04310	P56022	RS15_HELPY	30S ribosomal protein S15	rpsO
D4K88_RS04315	O06758	FLHA_HELPY	Flagellar biosynthesis protein FlhA	flhA
D4K88_RS04320	O25683	CNPDE_HELPY	3',5'-cyclic-nucleotide phosphodiesterase	cnoX
D4K88_RS04325	O06978	YVCP_BACSU	Uncharacterized transcriptional regulatory protein YvcP	yvcP
D4K88_RS04330	O25685	Y1044_HELPY	Uncharacterized metallophosphoesterase HP_1044	pks16
D4K88_RS04340	B6JKX8	ACSA_HELP2	Acetyl-coenzyme A synthetase	acsA
D4K88_RS04345	B2USN6	RIMP_HELPS	Ribosome maturation factor RimP	rimP
D4K88_RS04350	B6JKX6	RBFA_HELP2	Ribosome-binding factor A	rbfA
D4K88_RS04355	B6JKX5	IF2_HELP2	Translation initiation factor IF-2	infB
D4K88_RS04360	*			
D4K88_RS04365	O25690	KHSE_HELPY	Homoserine kinase	thrB
D4K88_RS04370	*			
D4K88_RS04375	Q1CUB0	LPXC_HELPH	UDP-3-O-acyl-N-acetylglucosamine deacetylase	lpxC
D4K88_RS04380	B6JKX0	MINC_HELP2	Probable septum site-determining protein MinC	minC
D4K88_RS04385	*			
D4K88_RS04390	*			
D4K88_RS04395	*			
D4K88_RS04400	*			
D4K88_RS04405	Q1CUB6	PANB_HELPH	3-methyl-2-oxobutanoate hydroxymethyltransferase	panB
D4K88_RS04410	B6JKW4	RUVB_HELP2	Holliday junction ATP-dependent DNA helicase RuvB	ruvB
D4K88_RS04415	Q1CUB8	TATB_HELPH	Sec-independent protein translocase protein TatB	tatB
D4K88_RS04420	O25701	TATC_HELPY	Sec-independent protein translocase protein TatC	tatC
D4K88_RS04425	B5ZAF2	QUEA_HELPG	S-adenosylmethionine:tRNA ribosyltransferase-isomerase	queA
D4K88_RS04430	O25703	RSMG_HELPY	Ribosomal RNA small subunit methyltransferase G	rsmG
D4K88_RS04435	*			
D4K88_RS04440	*			
D4K88_RS04445	*			
D4K88_RS04450	*			
D4K88_RS04455	P71403	CHEY1_HELPY	Chemotaxis protein CheY1	cheY1
D4K88_RS04460	O07678	PRMA_HELPY	Ribosomal protein L11 methyltransferase	prmA
D4K88_RS04465	P71408	FTSH_HELPY	ATP-dependent zinc metalloprotease FtsH	ftsH
D4K88_RS04470	O07680	Y1070_HELPY	Uncharacterized protein HP_1070	ylxM
D4K88_RS04475	Q9ZM68	PSS_HELPJ	CDP-diacylglycerol--serine O-phosphatidyltransferase	pssA
D4K88_RS04480	Q59467	COPA2_HELPX	Copper-transporting ATPase	copA
D4K88_RS04485	Q9ZM70	COPP_HELPJ	COP-associated protein	copP
D4K88_RS04490	*			
D4K88_RS04495	*			
D4K88_RS04500	Q48262	NIXA_HELPY	High-affinity nickel-transport protein NixA	nixA
D4K88_RS04510	O25711	ATGTP_HELPY	ATP/GTP phosphatase	speG
D4K88_RS04515	*			
D4K88_RS04520	*			
D4K88_RS04525	Q2LVL0	MSBA_SYNAS	ATP-dependent lipid A-core flippase	msbA
D4K88_RS04530	*			
D4K88_RS04535	Q1CUE2	PYRB_HELPH	Aspartate carbamoyltransferase	pyrB
D4K88_RS04540	*			
D4K88_RS04545	P19672	YQXC_BACSU	Putative rRNA methyltransferase YqxC	yqxC
D4K88_RS04550	Q8Y7F2	RIBCF_LISMO	Bifunctional riboflavin kinase/FMN adenylyltransferase	ribCF
D4K88_RS04555	P45694	TKT_BACSU	Transketolase	tkt
D4K88_RS04560	*			
D4K88_RS04565	O25722	FTSK_HELPY	DNA translocase FtsK	ftsK
D4K88_RS04570	*			
D4K88_RS04575	P0AEX3	KGTP_ECOLI	Alpha-ketoglutarate permease	kgtP
D4K88_RS04580	P0ABX5	FLGG_ECOLI	Flagellar basal-body rod protein FlgG	flgG
D4K88_RS04585	*			
D4K88_RS04595	*			
D4K88_RS04600	*			
D4K88_RS04605	P54992	YSNA_STRPR	Putative transposase in snaA-snaB intergenic region	ysmB
D4K88_RS04610	P59696	T200_SALTY	Transposase for insertion sequence element IS200	tnpA6
D4K88_RS04615	O25728	HCPC_HELPY	Putative beta-lactamase HcpC	hcpC
D4K88_RS04620	P0A955	ALKH_ECOLI	KHG/KDPG aldolase	eda
D4K88_RS04625	P56111	EDD_HELPY	Phosphogluconate dehydratase	edd
D4K88_RS04630	P56110	G6PD_HELPY	Glucose-6-phosphate 1-dehydrogenase	zwf
D4K88_RS04635	O25730	6PGL_HELPY	6-phosphogluconolactonase	pgl
D4K88_RS04640	Q9ZKB0	GLK_HELPJ	Glucokinase	glk
D4K88_RS04645	C0SPA5	ADHA_BACSU	Probable formaldehyde dehydrogenase AdhA	adhA
D4K88_RS04650	*			
D4K88_RS04655	*			
D4K88_RS04660	*			
D4K88_RS04665	O05650	PORC_THEMA	Pyruvate synthase subunit PorC	porC
D4K88_RS04670	*			
D4K88_RS04675	O05651	PORA_THEMA	Pyruvate synthase subunit PorA	porA
D4K88_RS04680	Q56317	PORB_THEMA	Pyruvate synthase subunit PorB	porB
D4K88_RS04685	P56468	PUR8_HELPY	Adenylosuccinate lyase	purB
D4K88_RS04690	*			
D4K88_RS04695	Q1CSF2	UVRB_HELPH	UvrABC system protein B	uvrB
D4K88_RS04700	*			
D4K88_RS04705	*			
D4K88_RS04710	*			
D4K88_RS04715	Q9ZKW9	RUVA_HELPJ	Holliday junction ATP-dependent DNA helicase RuvA	ruvA
D4K88_RS04720	*			
D4K88_RS04725	O25551	MURJ_HELPY	Probable lipid II flippase MurJ	murJ
D4K88_RS04730	P41259	SYC_HELPY	Cysteine--tRNA ligase	cysS
D4K88_RS04735	Q48253	VACA3_HELPX	Vacuolating cytotoxin autotransporter	vacA
D4K88_RS04740	O05732	Y888_HELPY	Probable iron chelatin transport ATP-binding protein HP_0888	fadE10
D4K88_RS04745	O05731	Y889_HELPY	Probable iron chelatin transport system permease protein HP_0889	fadE10
D4K88_RS04750	O05730	VDLC_HELPY	Probable short-chain type dehydrogenase/reductase VdlC	vdlC
D4K88_RS04755	P0A0Q7	VDLD_HELPY	Protein VdlD	vdlD
D4K88_RS04760	*			
D4K88_RS04765	*			
D4K88_RS04770	*			
D4K88_RS04790	P31904	HYPD2_BRADU	Hydrogenase maturation factor HypD2	hypD2
D4K88_RS04795	Q7VJB9	HYPC_HELHP	Hydrogenase maturation factor HypC	hypC
D4K88_RS04800	Q9ZKU8	HYPB_HELPJ	Hydrogenase/urease maturation factor HypB	hypB
D4K88_RS04805	*			
D4K88_RS04810	*			
D4K88_RS04820	Q9ZKU5	ACKA_HELPJ	Acetate kinase	ackA
D4K88_RS04830	*			
D4K88_RS04835	P75936	FLGD_ECOLI	Basal-body rod modification protein FlgD	flgD
D4K88_RS04840	O07884	FLGE_TREPA	Flagellar hook protein FlgE	flgE
D4K88_RS04840	O07884	FLGE_TREPA	Flagellar hook protein FlgE	flgE
D4K88_RS04845	*			
D4K88_RS04850	P17744	MTHC_HAEIF	Modification methylase HincII	hincIIM
D4K88_RS04855	P45612	UVRD_MYCCT	Probable DNA helicase II homolog	uvrD
D4K88_RS04860	*			
D4K88_RS04865	*			
D4K88_RS04870	*			
D4K88_RS04875	*			
D4K88_RS04880	*			
D4K88_RS04885	*			
D4K88_RS04890	Q9ZKT2	CARB_HELPJ	Carbamoyl-phosphate synthase large chain	carB
D4K88_RS04895	Q9ZKT1	Y920_HELPJ	Uncharacterized protein jhp_0854	fadE10
D4K88_RS04900	P55971	G3P_HELPY	Glyceraldehyde-3-phosphate dehydrogenase	gapA
D4K88_RS04905	P55981	VACA_HELPY	Vacuolating cytotoxin autotransporter	vacA
D4K88_RS04910	*			
D4K88_RS04915	O25581	Y924_HELPY	Probable tautomerase HP_0924	fadE10
D4K88_RS04920	B6JME6	RECR_HELP2	Recombination protein RecR	recR
D4K88_RS04925	P55985	TRUD_HELPY	tRNA pseudouridine synthase D	truD
D4K88_RS04930	Q9ZKS4	HTPX_HELPJ	Protease HtpX homolog	htpX
D4K88_RS04935	B6JME9	GCH1_HELP2	GTP cyclohydrolase 1	folE
D4K88_RS04940	P45204	ISPA_HAEIN	Farnesyl diphosphate synthase	ispA
D4K88_RS04945	B2UU78	SURE_HELPS	5'-nucleotidase SurE	surE
D4K88_RS04950	*			
D4K88_RS04955	O25587	QUED_HELPY	6-carboxy-5,6,7,8-tetrahydropterin synthase	queD
D4K88_RS04960	Q0PBX7	QUEE_CAMJE	7-carboxy-7-deazaguanine synthase	queE
D4K88_RS04965	*			
D4K88_RS04975	P44699	Y418_HAEIN	Putative metabolite transport protein HI_0418	lpl3
D4K88_RS04980	*			
D4K88_RS04990	P45023	Y1079_HAEIN	Probable amino-acid ABC transporter permease protein HI_0179	cbs
D4K88_RS04995	P45024	Y1080_HAEIN	Probable amino-acid ABC transporter-binding protein HI_1080	cbs
D4K88_RS05000	Q1CST1	ALR_HELPH	Alanine racemase	alr
D4K88_RS05005	P44917	Y883_HAEIN	Uncharacterized transporter HI_0883	fadE10
D4K88_RS05010	A3KEZ1	DADA_HELPX	D-amino acid dehydrogenase	dadA
D4K88_RS05015	Q9ZKQ6	Y944_HELPJ	RutC family protein jhp_0879	fadE10
D4K88_RS05025	*			
D4K88_RS05035	*			
D4K88_RS05040	P44263	Y1586_HAEIN	Uncharacterized protein HI_1586	wbbL2
D4K88_RS05045	*			
D4K88_RS05055	*			
D4K88_RS05060	B5Z7V2	RLMH_HELPG	Ribosomal RNA large subunit methyltransferase H	rlmH
D4K88_RS05065	Q7MAM0	ACCD_WOLSU	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta	accD
D4K88_RS05070	*			
D4K88_RS05075	A6LL44	CINAL_THEM4	CinA-like protein	cinA
D4K88_RS05080	*			
D4K88_RS05090	P59696	T200_SALTY	Transposase for insertion sequence element IS200	tnpA6
D4K88_RS05095	P54992	YSNA_STRPR	Putative transposase in snaA-snaB intergenic region	ysmB
D4K88_RS05100	Q1CSR7	RDXA_HELPH	Oxygen-insensitive NADPH nitroreductase	rdxA
D4K88_RS05105	O25609	LGT_HELPY	Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase	lgt
D4K88_RS05110	Q9ZKP5	Y956_HELPJ	Uncharacterized RNA pseudouridine synthase jhp_0890	fadE10
D4K88_RS05115	P44806	KDTA_HAEIN	3-deoxy-D-manno-octulosonic acid transferase	waaA
D4K88_RS05120	*			
D4K88_RS05125	O25613	GTPC1_HELPY	GTP cyclohydrolase 1 type 2	gtfS
D4K88_RS05130	Q1CSR1	SYGA_HELPH	Glycine--tRNA ligase alpha subunit	glyQ
D4K88_RS05135	Q9ZKP0	GPDA_HELPJ	Glycerol-3-phosphate dehydrogenase [NAD(P)+]	gpsA
D4K88_RS05155	*			
D4K88_RS05160	O25620	VAD2_HELPY	Endoribonuclease VapD homolog	vacA
D4K88_RS05165	*			
D4K88_RS05170	P13511	CZCA_CUPMC	Cobalt-zinc-cadmium resistance protein CzcA	czcA
D4K88_RS05175	*			
D4K88_RS05180	*			
D4K88_RS05185	P56454	SYGB_HELPY	Glycine--tRNA ligase beta subunit	glyS
D4K88_RS05190	*			
D4K88_RS05195	P56196	GPMI_HELPY	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	gpmI
D4K88_RS05200	Q1CSP9	GATC_HELPH	Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C	gatC
D4K88_RS05205	O25627	BIOA_HELPY	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase	bioA
D4K88_RS05210	*			
D4K88_RS05215	O25629	FTSA_HELPY	Cell division protein FtsA	ftsA
D4K88_RS05220	P56097	FTSZ_HELPY	Cell division protein FtsZ	ftsZ
D4K88_RS05225	*			
D4K88_RS05235	B6JKI8	EX7L_HELP2	Exodeoxyribonuclease 7 large subunit	xseA
D4K88_RS05240	*			
D4K88_RS05260	T0DVE4	MSCS_HELPX	Small-conductance mechanosensitive channel	mscS
D4K88_RS05265	*			
D4K88_RS05270	*			
D4K88_RS05275	*			
D4K88_RS05305	*			
D4K88_RS05320	*			
D4K88_RS05330	*			
D4K88_RS05340	*			
D4K88_RS05360	*			
D4K88_RS05365	*			
D4K88_RS05370	*			
D4K88_RS05375	Q9RXR4	SPEA_DEIRA	Biosynthetic arginine decarboxylase	speA
D4K88_RS05380	*			
D4K88_RS05385	*			
D4K88_RS05390	O25173	CMOB_HELPY	tRNA U34 carboxymethyltransferase	cmoB
D4K88_RS05395	*			
D4K88_RS05400	P56127	SYM_HELPY	Methionine--tRNA ligase	metG
D4K88_RS05405	P0A9H7	CFA_ECOLI	Cyclopropane-fatty-acyl-phospholipid synthase	cfa
D4K88_RS05410	O25170	Y415_HELPY	Uncharacterized MscS family protein HP_0415	lpl9
D4K88_RS05425	*			
D4K88_RS05435	*			
D4K88_RS05440	B6JMN5	GUAA_HELP2	GMP synthase [glutamine-hydrolyzing]	guaA
D4K88_RS05445	*			
D4K88_RS05450	Q52675	DSTOR_RHOCA	Dimethyl sulfoxide/trimethylamine N-oxide reductase	dorA
D4K88_RS05455	*			
D4K88_RS05460	P62031	GCSPB_TREDE	Probable glycine dehydrogenase (decarboxylating) subunit 2	gcvPB
D4K88_RS05465	P64382	YHIT_HELPY	Uncharacterized HIT-like protein HP_0404	yhiS
D4K88_RS05470	B5Z848	SYFA_HELPG	Phenylalanine--tRNA ligase alpha subunit	pheS
D4K88_RS05475	P56145	SYFB_HELPY	Phenylalanine--tRNA ligase beta subunit	pheT
D4K88_RS05480	B5Z850	AROA_HELPG	3-phosphoshikimate 1-carboxyvinyltransferase	aroA
D4K88_RS05485	B6JMP4	ISPH_HELP2	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	ispH
D4K88_RS05490	P56008	RS1_HELPY	30S ribosomal protein S1	rpsA
D4K88_RS05495	*			
D4K88_RS05500	P35136	SERA_BACSU	D-3-phosphoglycerate dehydrogenase	serA
D4K88_RS05505	O25157	Y396_HELPY	Uncharacterized protein HP_0396	guaB3
D4K88_RS05510	O25156	PLPHP_HELPY	Pyridoxal phosphate homeostasis protein	yggS
D4K88_RS05515	*			
D4K88_RS05520	O25154	CHEV3_HELPY	Chemotaxis protein CheV3	cheV3
D4K88_RS05525	O25153	CHEAY_HELPY	Sensor histidine kinase CheAY	cheAY
D4K88_RS05530	O25152	CHEW_HELPY	Chemotaxis protein CheW	cheW
D4K88_RS05535	Q9ZKE7	TPX_HELPJ	Thiol peroxidase	tpx
D4K88_RS05540	P43312	SODF_HELPY	Superoxide dismutase [Fe]	sodB
D4K88_RS05545	B6JMQ6	CMOA_HELP2	Carboxy-S-adenosyl-L-methionine synthase	cmoA
D4K88_RS05550	Q9ZKE4	PRIA_HELPJ	Primosomal protein N'	priA
D4K88_RS05555	P64659	Y386_HELPY	Uncharacterized protein HP_0386	guaB3
D4K88_RS05560	*			
D4K88_RS05565	*			
D4K88_RS05570	*			
D4K88_RS05575	B8GTV4	HTPX_THISH	Protease HtpX	htpX
D4K88_RS05580	Q9WYV8	PRMC_THEMA	Release factor glutamine methyltransferase	prmC
D4K88_RS05585	P55990	DHE4_HELPY	NADP-specific glutamate dehydrogenase	gdhA
D4K88_RS05590	O30511	FUCT_HELPX	Alpha-(1,3)-fucosyltransferase FucT	fucT
D4K88_RS05595	Q9S1E4	NRFI_WOLSU	Protein NrfI	nrfI
D4K88_RS05600	*			
D4K88_RS05605	B5Z875	HEMH_HELPG	Ferrochelatase	hemH
D4K88_RS05610	*			
D4K88_RS05615	Q9ZKD2	RSME_HELPJ	Ribosomal RNA small subunit methyltransferase E	rsmE
D4K88_RS05620	*			
D4K88_RS05625	B5Z879	DCD_HELPG	dCTP deaminase	dcd
D4K88_RS05630	Q06881	BCCP_NOSS1	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	accB
D4K88_RS05635	Q06862	ACCC_NOSS1	Biotin carboxylase	accC
D4K88_RS05640	*			
D4K88_RS05650	*			
D4K88_RS05655	O25130	PSEC_HELPY	UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase	pseC
D4K88_RS05660	*			
D4K88_RS05665	P55983	RIR2_HELPY	Ribonucleoside-diphosphate reductase subunit beta	nrdB
D4K88_RS05670	Q9ZKC2	PIMT_HELPJ	Protein-L-isoaspartate O-methyltransferase	pcm
D4K88_RS05675	*			
D4K88_RS05680	B6JMT3	TRUA_HELP2	tRNA pseudouridine synthase A	truA
D4K88_RS05685	Q59083	EXOB_AZOBR	UDP-glucose 4-epimerase	exoB
D4K88_RS05695	*			
D4K88_RS05700	*			
D4K88_RS05705	P45200	Y1430_HAEIN	Probable NADP-dependent dehydrogenase HI_1430	fabG2
D4K88_RS05710	*			
D4K88_RS05715	Q1CUF5	LEPA_HELPH	Elongation factor 4	lepA
D4K88_RS05720	O25121	DXS_HELPY	1-deoxy-D-xylulose-5-phosphate synthase	dxs
D4K88_RS05725	*			
D4K88_RS05730	O25119	FLIG_HELPY	Flagellar motor switch protein FliG	fliG
D4K88_RS05735	P25798	FLIF_ECOLI	Flagellar M-ring protein	fliF
D4K88_RS05740	*			
D4K88_RS05745	Q1CUG1	PYRG_HELPH	CTP synthase	pyrG
D4K88_RS05750	O32044	RECJ_BACSU	Single-stranded-DNA-specific exonuclease RecJ	recJ
D4K88_RS05755	O25114	Y347_HELPY	Uncharacterized RNA pseudouridine synthase HP_0347	guaB3
D4K88_RS05760	*			
D4K88_RS05765	*			
D4K88_RS05770	*			
D4K88_RS05780	*			
D4K88_RS05785	*			
D4K88_RS05790	*			
D4K88_RS05795	*			
D4K88_RS05800	*			
D4K88_RS05805	O25103	HCPB_HELPY	Beta-lactamase HcpB	hcpB
D4K88_RS05810	B5ZAA2	YQGF_HELPG	Putative pre-16S rRNA nuclease	yqgF
D4K88_RS05815	P73345	SMF_SYNY3	Protein Smf	smf
D4K88_RS05820	B5ZAA0	MINE_HELPG	Cell division topological specificity factor	minE
D4K88_RS05825	O25098	MIND_HELPY	Septum site-determining protein MinD	minD
D4K88_RS05830	O25097	ILVC_HELPY	Ketol-acid reductoisomerase (NADP(+))	ilvC
D4K88_RS05835	*			
D4K88_RS05840	Q9ZMB0	NADE_HELPJ	NH(3)-dependent NAD(+) synthetase	nadE
D4K88_RS05845	Q1CUH3	LPXK_HELPH	Tetraacyldisaccharide 4'-kinase	lpxK
D4K88_RS05850	O25094	PSEH_HELPY	UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	pseH
D4K88_RS05855	O25093	PSEFG_HELPY	Pseudaminic acid cytidylyltransferase and UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase	pseC
D4K88_RS05860	O25093	PSEFG_HELPY	Pseudaminic acid cytidylyltransferase and UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase	pseC
D4K88_RS05865	O25092	FLGH_HELPY	Flagellar L-ring protein	flgH
D4K88_RS05870	*			
D4K88_RS05875	*			
D4K88_RS05880	O25089	CHPEP_HELPY	Chemotaxis regulatory protein ChePep	chePep
D4K88_RS05885	Q1CUI1	KGUA_HELPH	Guanylate kinase	gmk
D4K88_RS05890	O25088	TATA_HELPY	Sec-independent protein translocase protein TatA	tatA
D4K88_RS05895	Q1CUI3	SYR_HELPH	Arginine--tRNA ligase	argS
D4K88_RS05900	O25087	HUGZ_HELPY	Heme oxygenase HugZ	hugZ
D4K88_RS05905	*			
D4K88_RS05910	*			
D4K88_RS05930	*			
D4K88_RS05935	P24203	YJIA_ECOLI	P-loop guanosine triphosphatase YjiA	yjiA
D4K88_RS05940	*			
D4K88_RS05945	O25080	PGDAE_HELPY	Peptidoglycan deacetylase	pgdA
D4K88_RS05950	O31664	MTNU_BACSU	2-oxoglutaramate amidase	mtnU
D4K88_RS05955	*			
D4K88_RS05960	*			
D4K88_RS05965	B6JKN5	GSA_HELP2	Glutamate-1-semialdehyde 2,1-aminomutase	hemL
D4K88_RS05970	*			
D4K88_RS05975	*			
D4K88_RS05980	Q1CUK0	OBG_HELPH	GTPase Obg	obg
D4K88_RS05985	P37313	DPPF_ECOLI	Dipeptide transport ATP-binding protein DppF	dppF
D4K88_RS05990	P42064	APPD_BACSU	Oligopeptide transport ATP-binding protein AppD	appD
D4K88_RS05995	P51000	DPPC_HAEIN	Dipeptide transport system permease protein DppC	dppC
D4K88_RS06000	P0AEF8	DPPB_ECOLI	Dipeptide transport system permease protein DppB	dppB
D4K88_RS06005	P33950	HBPA_HAEIN	Heme-binding protein A	hbpA
D4K88_RS06010	B2USC8	RL27_HELPS	50S ribosomal protein L27	rpmA
D4K88_RS06015	Q1CUK7	RL21_HELPH	50S ribosomal protein L21	rplU
D4K88_RS06020	*			
D4K88_RS06025	B2USC5	AMIE_HELPS	Aliphatic amidase	amiE
D4K88_RS06030	P05041	PABB_ECOLI	Aminodeoxychorismate synthase component 1	pabB
D4K88_RS06035	*			
D4K88_RS06040	*			
D4K88_RS06045	B4XMC6	DCDA_HELPX	Diaminopimelate decarboxylase	lysA
D4K88_RS06055	*			
D4K88_RS06060	*			
D4K88_RS06065	D2QZ34	FTSH_PIRSD	ATP-dependent zinc metalloprotease FtsH	ftsH
D4K88_RS06070	Q9ZMF0	Y285_HELPJ	Putative methylthiotransferase jhp_0270	yrrT
D4K88_RS06075	*			
D4K88_RS06080	B5ZA49	AROB_HELPG	3-dehydroquinate synthase	aroB
D4K88_RS06085	*			
D4K88_RS06090	Q9ZMF4	TGT_HELPJ	Queuine tRNA-ribosyltransferase	tgt
D4K88_RS06095	*			
D4K88_RS06100	P37692	RFAF_ECOLI	ADP-heptose--LPS heptosyltransferase 2	rfaF
D4K88_RS06105	Q9X8H1	Y3348_STRCO	Uncharacterized protein SCO3348	ybaB
D4K88_RS06110	*			
D4K88_RS06115	A7I2Y2	TRPC_CAMHC	Indole-3-glycerol phosphate synthase	trpC
D4K88_RS06120	*			
D4K88_RS06125	P56132	Y274_HELPY	Uncharacterized protein HP_0274	yrrT
D4K88_RS06130	*			
D4K88_RS06135	*			
D4K88_RS06140	*			
D4K88_RS06145	*			
D4K88_RS06150	B6JKJ8	MIAB_HELP2	tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase	miaB
D4K88_RS06155	*			
D4K88_RS06160	O25046	ADDE_HELPY	Adenosine deaminase	addB
D4K88_RS06165	O25045	PYRX_HELPY	Probable dihydroorotase-like protein	pyrC'
D4K88_RS06170	P44202	Y1454_HAEIN	Putative cytochrome c-type biogenesis protein HI_1454	fabG2
D4K88_RS06175	P71404	CLPB_HELPY	Chaperone protein ClpB	clpB
D4K88_RS06180	P50178	MTL22_LACLC	Modification methylase LlaDCHIB	llaDCHIBM
D4K88_RS06185	O25042	Y262_HELPY	Uncharacterized protein HP_0262	yrrT
D4K88_RS06190	*			
D4K88_RS06195	P40814	T3MO_SALTY	Type III restriction-modification system StyLTI enzyme mod	mod
D4K88_RS06200	Q1CUP4	EX7L_HELPH	Exodeoxyribonuclease 7 large subunit	xseA
D4K88_RS06205	P56136	Y258_HELPY	Putative zinc metalloprotease HP_0258	yrrT
D4K88_RS06210	*			
D4K88_RS06215	*			
D4K88_RS06220	B6JKI4	PURA_HELP2	Adenylosuccinate synthetase	purA
D4K88_RS06225	*			
D4K88_RS06230	*			
D4K88_RS06235	*			
D4K88_RS06250	P33916	YEJF_ECOLI	Uncharacterized ABC transporter ATP-binding protein YejF	yejF
D4K88_RS06255	*			
D4K88_RS06260	*			
D4K88_RS06265	B9XXL6	RHPA_HELP8	DEAD-box ATP-dependent RNA helicase RhpA	rhpA
D4K88_RS06270	B5ZA13	FLGI_HELPG	Flagellar P-ring protein	flgI
D4K88_RS06275	P64657	Y245_HELPY	Uncharacterized protein HP_0245	yrrT
D4K88_RS06280	O25026	FLGS_HELPY	Sensor histidine kinase FlgS	flgS
D4K88_RS06285	Q9K2M7	DPS_HELPY	DNA protection during starvation protein	dps
D4K88_RS06290	*			
D4K88_RS06295	*			
D4K88_RS06300	P72580	PREA_SYNY3	Prenyl transferase	preA
D4K88_RS06305	B6JKH0	HEM1_HELP2	Glutamyl-tRNA reductase	hemA
D4K88_RS06310	P56124	SYP_HELPY	Proline--tRNA ligase	proS
D4K88_RS06315	B5ZA04	HEM3_HELPG	Porphobilinogen deaminase	hemC
D4K88_RS06320	*			
D4K88_RS06325	O25021	HCPE_HELPY	Putative beta-lactamase HcpE	hcpE
D4K88_RS06330	*			
D4K88_RS06335	P33222	YJFC_ECOLI	Putative acid--amine ligase YjfC	yjfC
D4K88_RS06340	O25018	Y232_HELPY	UPF0323 lipoprotein HP_0232	orf3
D4K88_RS06345	*			
D4K88_RS06350	Q1CUS2	KDSB_HELPH	3-deoxy-manno-octulosonate cytidylyltransferase	kdsB
D4K88_RS06355	*			
D4K88_RS06365	P55189	YBAR_BACSU	Putative sulfate transporter YbaR	ybaR
D4K88_RS06370	*			
D4K88_RS06375	Q9PFB4	Y764_XYLFA	Probable membrane transporter protein XF_0764	metK1
D4K88_RS06380	O25011	MSRAB_HELPY	Peptide methionine sulfoxide reductase MsrA/MsrB	msrAB
D4K88_RS06385	P56148	RADA_HELPY	DNA repair protein RadA	radA
D4K88_RS06390	*			
D4K88_RS06395	Q43885	NIFU_TRIAZ	Nitrogen fixation protein NifU	nifU
D4K88_RS06400	B6JKF2	ISCS_HELP2	Cysteine desulfurase IscS	iscS
D4K88_RS06405	*			
D4K88_RS06410	P55185	YXKA_BACSU	Uncharacterized protein YxkA	yxkA
D4K88_RS06415	P56139	DXR_HELPY	1-deoxy-D-xylulose 5-phosphate reductoisomerase	dxr
D4K88_RS06420	O25004	CDSA_HELPY	Phosphatidate cytidylyltransferase	cdsA
D4K88_RS06425	Q49YW0	SDCS_STAS1	Sodium-dependent dicarboxylate transporter SdcS	sdcS
D4K88_RS06430	Q1CUU1	MNMG_HELPH	tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG	mnmG
D4K88_RS06435	B6JKE4	DAPE_HELP2	Succinyl-diaminopimelate desuccinylase	dapE
D4K88_RS06440	O25001	HCPA_HELPY	Beta-lactamase HcpA	hcpA
D4K88_RS06445	Q9ZMM2	HTPG_HELPJ	Chaperone protein HtpG	htpG
D4K88_RS06450	*			
D4K88_RS06455	*			
D4K88_RS06460	Q9ZMM5	APBC_HELPJ	Iron-sulfur cluster carrier protein	mrp
D4K88_RS06470	*			
D4K88_RS06475	*			
D4K88_RS06480	*			
D4K88_RS06485	B6JKD5	FABH_HELP2	3-oxoacyl-[acyl-carrier-protein] synthase 3	fabH
D4K88_RS06490	B2US31	PLSX_HELPS	Phosphate acyltransferase	plsX
D4K88_RS06495	B2US30	RL32_HELPS	50S ribosomal protein L32	rpmF
D4K88_RS06500	*			
D4K88_RS06505	B5Z9W9	NDK_HELPG	Nucleoside diphosphate kinase	ndk
D4K88_RS06510	B5Z9W8	METK_HELPG	S-adenosylmethionine synthase	metK
D4K88_RS06515	Q1CUW5	LPXD_HELPH	UDP-3-O-acylglucosamine N-acyltransferase	lpxD
D4K88_RS06520	Q9ZMN7	FABI_HELPJ	Enoyl-[acyl-carrier-protein] reductase [NADH] FabI	fabI
D4K88_RS06525	P56076	TPIS_HELPY	Triosephosphate isomerase	tpiA
D4K88_RS06530	Q9ZMN9	FRDC_HELPJ	Fumarate reductase cytochrome b subunit	frdC
D4K88_RS06535	O06913	FRDA_HELPY	Fumarate reductase flavoprotein subunit	frdA
D4K88_RS06540	O06914	FRDB_HELPY	Fumarate reductase iron-sulfur subunit	frdB
D4K88_RS06545	P56117	Y190_HELPY	Uncharacterized protein HP_0190	guaB1
D4K88_RS06550	B5Z9W0	Y173_HELPG	UPF0114 protein HPG27_173	eep
D4K88_RS06570	*			
D4K88_RS06575	*			
D4K88_RS06580	Q1CUX5	GLYA_HELPH	Serine hydroxymethyltransferase	glyA
D4K88_RS06585	B6JPT1	SYK_HELP2	Lysine--tRNA ligase	lysS
D4K88_RS06590	*			
D4K88_RS06595	O24982	LNT_HELPY	Apolipoprotein N-acyltransferase	lnt
D4K88_RS06600	Q12NL5	LOLD_SHEDO	Lipoprotein-releasing system ATP-binding protein LolD	lolD
D4K88_RS06605	O24980	PSEI_HELPY	Pseudaminic acid synthase	pseI
D4K88_RS06610	B6JPS3	EFP_HELP2	Elongation factor P	efp
D4K88_RS06615	P56109	ALF_HELPY	Fructose-bisphosphate aldolase	fba
D4K88_RS06620	Q9ZMQ7	Y161_HELPJ	Putative peptidyl-prolyl cis-trans isomerase jhp_0161	wbbL2
D4K88_RS06625	*			
D4K88_RS06630	*			
D4K88_RS06635	*			
D4K88_RS06640	P12281	MOEA_ECOLI	Molybdopterin molybdenumtransferase	moeA
D4K88_RS06645	B2US00	RF2_HELPS	Peptide chain release factor 2	prfB
D4K88_RS06650	O24976	CHEZ_HELPY	Protein phosphatase CheZ	cheZ
D4K88_RS06655	Q9ZMR3	TRHP_HELPJ	tRNA hydroxylation protein P	trhP
D4K88_RS06660	*			
D4K88_RS06665	*			
D4K88_RS06670	O24973	ARSR_HELPY	Transcriptional regulatory protein ArsR	arsR
D4K88_RS06680	P56074	HEM2_HELPY	Delta-aminolevulinic acid dehydratase	hemB
D4K88_RS06685	O24970	Y162_HELPY	Probable transcriptional regulatory protein HP_0162	wbbL2
D4K88_RS06695	P59696	T200_SALTY	Transposase for insertion sequence element IS200	tnpA6
D4K88_RS06700	P54992	YSNA_STRPR	Putative transposase in snaA-snaB intergenic region	ysmB
D4K88_RS06705	*			
D4K88_RS06710	Q9ZMS0	HCPD_HELPJ	Putative beta-lactamase HcpD	hcpD
D4K88_RS06715	*			
D4K88_RS06720	*			
D4K88_RS06725	B6JPQ5	AROK_HELP2	Shikimate kinase	aroK
D4K88_RS06730	*			
D4K88_RS06735	*			
D4K88_RS06740	Q9ZMS6	ENO_HELPJ	Enolase	eno
D4K88_RS06745	B2URY3	RECA_HELPS	Protein RecA	recA
D4K88_RS06750	*			
D4K88_RS06755	*			
D4K88_RS06760	*			
D4K88_RS06765	*			
D4K88_RS06770	*			
D4K88_RS06775	D0K261	CCOP_HELP5	Cbb3-type cytochrome c oxidase subunit CcoP	ccoP
D4K88_RS06780	*			
D4K88_RS06785	*			
D4K88_RS06790	D9IA43	CCON1_PSEST	Cbb3-type cytochrome c oxidase subunit CcoN1	ccoN1
D4K88_RS06795	P0AE74	CITT_ECOLI	Citrate/succinate antiporter	citT
D4K88_RS06800	Q89A45	MUTY_BUCBP	Adenine DNA glycosylase	mutY
D4K88_RS06805	P33231	LLDP_ECOLI	L-lactate permease	lldP
D4K88_RS06810	P33231	LLDP_ECOLI	L-lactate permease	lldP
D4K88_RS06815	C5D587	LUTA_GEOSW	Lactate utilization protein A	lutA
D4K88_RS06820	P77536	YKGF_ECOLI	Uncharacterized electron transport protein YkgF	ykgF
D4K88_RS06825	Q9JYT7	Y1437_NEIMB	Uncharacterized protein NMB1437	fabG2
D4K88_RS06830	Q9ZMU4	BCP_HELPJ	Putative peroxiredoxin bcp	bcp
D4K88_RS06835	P64655	Y135_HELPY	Uncharacterized protein HP_0135	fabG2
D4K88_RS06840	P80574	AROF_STRCO	Phospho-2-dehydro-3-deoxyheptonate aldolase	aroH
D4K88_RS06845	P44615	SDAC_HAEIN	Serine transporter	sdaC
D4K88_RS06850	P56072	SDHL_HELPY	L-serine dehydratase	sdaA
D4K88_RS06855	*			
D4K88_RS06860	*			
D4K88_RS06865	*			
D4K88_RS06870	Q1CV30	RL20_HELPH	50S ribosomal protein L20	rplT
D4K88_RS06875	B2URV3	RL35_HELPS	50S ribosomal protein L35	rpmI
D4K88_RS06880	P55973	IF3_HELPY	Translation initiation factor IF-3	infC
D4K88_RS06885	B2URV1	SYT_HELPS	Threonine--tRNA ligase	thrS
D4K88_RS06890	P64653	Y122_HELPY	Uncharacterized protein HP_0122	ybcG
D4K88_RS06895	Q9ZMV4	PPSA_HELPJ	Phosphoenolpyruvate synthase	ppsA
D4K88_RS06900	*			
D4K88_RS06905	Q9ZMV6	Y117_HELPJ	UPF0026 protein jhp_0109	cbs
D4K88_RS06910	P55991	TOP1_HELPY	DNA topoisomerase 1	topA
D4K88_RS06915	Q07911	FLAB_HELPY	Flagellin B	flaB
D4K88_RS06920	*			
D4K88_RS06925	*			
D4K88_RS06930	*			
D4K88_RS06935	O24933	HRCA_HELPY	Heat-inducible transcription repressor HrcA	hrcA
D4K88_RS06940	Q1CV45	GRPE_HELPH	Protein GrpE	grpE
D4K88_RS06945	Q1CV46	DNAK_HELPH	Chaperone protein DnaK	dnaK
D4K88_RS06950	*			
D4K88_RS06955	P56067	CYSM_HELPY	Cysteine synthase	cysM
D4K88_RS06960	P56069	METB_HELPY	Cystathionine gamma-synthase	metB
D4K88_RS06965	B2URT5	LUXS_HELPS	S-ribosylhomocysteine lyase	luxS
D4K88_RS06970	O34313	NTPES_BACSU	Trifunctional nucleotide phosphoesterase protein YfkN	yfkN
D4K88_RS06975	Q9I0I6	MALCR_PSEAE	Methyl-accepting chemotaxis protein PA2652	malA
D4K88_RS06980	Q57287	Y1578_HAEIN	Uncharacterized glycosyltransferase HI_1578	wbbL2
D4K88_RS06985	*			
D4K88_RS06990	O24926	QUEH_HELPY	Epoxyqueuosine reductase QueH	queH
D4K88_RS06995	Q9I3S1	BDLA_PSEAE	Biofilm dispersion protein BdlA	bdlA
D4K88_RS07000	B5Z683	RS9_HELPG	30S ribosomal protein S9	rpsI
D4K88_RS07005	B5Z684	RL13_HELPG	50S ribosomal protein L13	rplM
D4K88_RS07010	P64651	Y085_HELPY	Uncharacterized protein HP_0085	fadA
D4K88_RS07015	Q1CV68	MQO_HELPH	Probable malate:quinone oxidoreductase	mqo
D4K88_RS07020	*			
D4K88_RS07025	Q9ZMY3	RPOD_HELPJ	RNA polymerase sigma factor RpoD	rpoD
D4K88_RS07030	O24915	MQMTN_HELPY	Aminodeoxyfutalosine nucleosidase	mtnN
D4K88_RS07035	P71019	FABD_BACSU	Malonyl CoA-acyl carrier protein transacylase	fabD
D4K88_RS07040	*			
D4K88_RS07045	P34719	T2M1_MORBO	Type-2 restriction enzyme MboI	mboIR
D4K88_RS07050	P34721	MT1B_MORBO	Modification methylase MboIB	mboIBM
D4K88_RS07055	Q58YV9	WBNK_ECOLX	O-antigen biosynthesis glycosyltransferase WbnK	wbnK
D4K88_RS07065	*			
D4K88_RS07070	P45250	Y1556_HAEIN	Putative 2-hydroxyacid dehydrogenase HI_1556	wbbL2
D4K88_RS07075	*			
D4K88_RS07080	O24924	THRC_HELPY	Threonine synthase	thrC
D4K88_RS07085	Q88IY8	MCPP_PSEPK	Methyl-accepting chemotaxis protein McpP	mcpP
D4K88_RS07090	*			
D4K88_RS07095	*			
D4K88_RS07100	*			
D4K88_RS07110	Q1CV77	RF1_HELPH	Peptide chain release factor 1	prfA
D4K88_RS07115	B5Z679	RS20_HELPG	30S ribosomal protein S20	rpsT
D4K88_RS07120	Q1CV79	GLMM_HELPH	Phosphoglucosamine mutase	glmM
D4K88_RS07125	P25178	LSPA_HELPY	Lipoprotein signal peptidase	lspA
D4K88_RS07130	*			
D4K88_RS07135	B6JPH6	URE23_HELP2	Urease subunit alpha	ureA
D4K88_RS07140	P69996	URE1_HELPY	Urease subunit beta	ureB
D4K88_RS07145	Q09068	UREI_HELPY	Acid-activated urea channel	ureI
D4K88_RS07150	B5Z672	UREE_HELPG	Urease accessory protein UreE	ureE
D4K88_RS07155	Q09065	UREF_HELPY	Urease accessory protein UreF	ureF
D4K88_RS07160	B5Z671	UREG_HELPG	Urease accessory protein UreG	ureG
D4K88_RS07165	Q09067	UREH_HELPY	Urease accessory protein UreH	ureH
D4K88_RS07175	*			
D4K88_RS07190	*			
D4K88_RS07195	*			
D4K88_RS07200	*			
D4K88_RS07205	*			
D4K88_RS07210	*			
D4K88_RS07215	*			
D4K88_RS07220	*			
D4K88_RS07225	P10503	PUTA_SALTY	Bifunctional protein PutA	putA
D4K88_RS07230	P07117	PUTP_ECOLI	Sodium/proline symporter	putP
D4K88_RS07240	*			
D4K88_RS07250	*			
D4K88_RS07255	P14827	MTEC_ENTCL	Modification methylase EcaI	ecaIM
D4K88_RS07270	P34877	MTSA_LACLC	Modification methylase ScrFIA	scrFIAM
D4K88_RS07275	P50178	MTL22_LACLC	Modification methylase LlaDCHIB	llaDCHIBM
D4K88_RS07280	A4XP44	AGUA_PSEMY	Agmatine deiminase	aguA
D4K88_RS07285	Q55638	HYPF_SYNY3	Carbamoyltransferase HypF	hypF
D4K88_RS07290	P26412	HYPE_RHOCA	Carbamoyl dehydratase HypE	hypE
D4K88_RS07295	G4WJD3	COLC_YERPU	GDP-L-colitose synthase	colC
D4K88_RS07300	Q56872	GM4D_YERE8	GDP-mannose 4,6-dehydratase	gmd
D4K88_RS07305	P07874	ALGA_PSEAE	Alginate biosynthesis protein AlgA	algA
D4K88_RS07310	*			
D4K88_RS07315	*			
D4K88_RS07320	*			
D4K88_RS07325	*			
D4K88_RS07330	*			
D4K88_RS07335	*			
D4K88_RS07340	Q1CVC2	Y033_HELPH	Nucleoid-associated protein HPAG1_0033	xypA
D4K88_RS07345	Q1CVC3	PAND_HELPH	Aspartate 1-decarboxylase	panD
D4K88_RS07350	P0ABH9	CLPA_ECOLI	ATP-dependent Clp protease ATP-binding subunit ClpA	clpA
D4K88_RS07355	P56066	CLPS_HELPY	ATP-dependent Clp protease adapter protein ClpS	clpS
D4K88_RS07360	P64649	Y031_HELPY	Universal stress protein HP_0031	xypA
D4K88_RS07365	*			
D4K88_RS07370	B2UW31	BIOD_HELPS	ATP-dependent dethiobiotin synthetase BioD	bioD
D4K88_RS07375	P43999	Y453_HAEIN	Uncharacterized protein HI_0453	lpl9
D4K88_RS07380	P56063	IDH_HELPY	Isocitrate dehydrogenase [NADP]	icd
D4K88_RS07385	Q9ZN37	CISY_HELPJ	Citrate synthase	gltA
D4K88_RS07390	*			
D4K88_RS07400	O24867	EPTA_HELPY	Phosphoethanolamine transferase EptA	eptA
D4K88_RS07405	O24866	LPXE_HELPY	Lipid A 1-phosphatase	lpxE
D4K88_RS07410	A8FNH9	NSPC_CAMJ8	Carboxynorspermidine/carboxyspermidine decarboxylase	nspC
D4K88_RS07415	O24864	CHEV1_HELPY	Chemotaxis protein CheV1	cheV1
D4K88_RS07420	*			
D4K88_RS07430	*			
D4K88_RS07435	*			
D4K88_RS07440	*			
D4K88_RS07445	*			
D4K88_RS07450	Q73PV6	MNMA_TREDE	tRNA-specific 2-thiouridylase MnmA	mnmA
D4K88_RS07455	P56064	DNAG_HELPY	DNA primase	dnaG
D4K88_RS07465	B6JPA8	CH10_HELP2	10 kDa chaperonin	groS
D4K88_RS07470	B5Z6D1	CH60_HELPG	60 kDa chaperonin	groL
D4K88_RS07475	*			
D4K88_RS07480	*			
D4K88_RS07490	*			
D4K88_RS07495	*			
D4K88_RS07505	B5Z6E3	PANC_HELPG	Pantothenate synthetase	panC
D4K88_RS07510	P56155	PYRF_HELPY	Orotidine 5'-phosphate decarboxylase	pyrF
D4K88_RS07515	Q9ZN54	CYNT_HELPJ	Carbonic anhydrase	cynT
D4K88_RS07520	Q1CVF2	KDSA_HELPH	2-dehydro-3-deoxyphosphooctonate aldolase	kdsA
D4K88_RS07525	B5Z6D8	RISB_HELPG	6,7-dimethyl-8-ribityllumazine synthase	ribH
D4K88_RS07530	B5Z6D7	NUSB_HELPG	Transcription antitermination protein NusB	nusB
D4K88_RS07540	Q9ZJ24	YF88_HELPJ	UPF0174 protein jhp_1494	yezG
D4K88_RS07545	O26106	Y1587_HELPY	UPF0174 protein HP_1587	wbbL2
D4K88_RS07555	Q9ZJ25	YF87_HELPJ	UPF0174 protein jhp_1493	yezG
D4K88_RS07560	*			
D4K88_RS07565	Q8K9K4	FLGG_BUCAP	Flagellar basal-body rod protein FlgG	flgG
D4K88_RS07570	P55996	TSAD_HELPY	tRNA N6-adenosine threonylcarbamoyltransferase	tsaD
D4K88_RS07575	Q1CR24	PDXA_HELPH	4-hydroxythreonine-4-phosphate dehydrogenase	pdxA
D4K88_RS07580	B6JP91	PDXJ_HELP2	Pyridoxine 5'-phosphate synthase	pdxJ
D4K88_RS07585	O34753	TAGO_BACSU	Probable undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase	tagO
D4K88_RS07590	Q9ZJ31	LPXF_HELPJ	Lipid A 4'-phosphatase	lpxF
D4K88_RS07595	*			
D4K88_RS07600	*			
D4K88_RS07605	Q9KTJ6	METI_VIBCH	Probable D-methionine transport system permease protein MetI	metI
D4K88_RS07610	Q9ZJ34	METN_HELPJ	Methionine import ATP-binding protein MetN	metN
D4K88_RS07615	*			
D4K88_RS07620	O67604	RISA_AQUAE	Riboflavin synthase	ribE
D4K88_RS07625	P37545	YABD_BACSU	Uncharacterized metal-dependent hydrolase YabD	yabD
D4K88_RS07630	P0AEZ7	MLTD_ECOLI	Membrane-bound lytic murein transglycosylase D	mltD
D4K88_RS07635	O26091	RLPA_HELPY	Endolytic peptidoglycan transglycosylase RlpA	rlpA
D4K88_RS07640	A0A140N5J7	KDSC_ECOBD	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC	kdsC
D4K88_RS07645	*			
D4K88_RS07650	*			
D4K88_RS07655	B5Z9J7	ENGB_HELPG	Probable GTP-binding protein EngB	engB
D4K88_RS07660	*			
D4K88_RS07665	P44469	MRDA_HAEIN	Peptidoglycan D,D-transpeptidase MrdA	mrdA
D4K88_RS07670	Q9CK95	METQ_PASMU	Probable D-methionine-binding lipoprotein MetQ	metQ
D4K88_RS07675	P21762	AHPC_HELPY	Alkyl hydroperoxide reductase C	ahpC
D4K88_RS07680	*			
D4K88_RS07685	*			
D4K88_RS07690	P56096	FTSW_HELPY	Probable peptidoglycan glycosyltransferase FtsW	ftsW
D4K88_RS07695	P0ABW9	FLGB_ECOLI	Flagellar basal body rod protein FlgB	flgB
D4K88_RS07700	P24501	FLGC_BACSU	Flagellar basal-body rod protein FlgC	flgC
D4K88_RS07705	B2UVX4	FLIE_HELPS	Flagellar hook-basal body complex protein FliE	fliE
D4K88_RS07710	*			
D4K88_RS07715	P57317	FTSI_BUCAI	Peptidoglycan D,D-transpeptidase FtsI	ftsI
D4K88_RS07720	P55975	EFTS_HELPY	Elongation factor Ts	tsf
D4K88_RS07725	B2UVV5	RS2_HELPS	30S ribosomal protein S2	rpsB
D4K88_RS07730	Q03D71	ADDA_PEDPA	ATP-dependent helicase/nuclease subunit A	addA
D4K88_RS07735	Q1CR54	NHAA_HELPH	Na(+)/H(+) antiporter NhaA	nhaA
D4K88_RS07740	O26075	YAJC_HELPY	Sec translocon accessory complex subunit YajC	yajC
D4K88_RS07745	O26074	SECD_HELPY	Protein translocase subunit SecD	secD
D4K88_RS07750	Q9ZJ65	SECF_HELPJ	Protein translocase subunit SecF	secF
D4K88_RS07755	*			
D4K88_RS07760	Q1CR59	SYL_HELPH	Leucine--tRNA ligase	leuS
D4K88_RS07765	*			
D4K88_RS07770	Q89AT2	FOLC_BUCBP	Dihydrofolate synthase/folylpolyglutamate synthase	folC
D4K88_RS07775	*			
D4K88_RS07780	P44693	Y409_HAEIN	Uncharacterized metalloprotease HI_0409	lpl9
D4K88_RS07785	*			
D4K88_RS07790	O26066	MFD_HELPY	Transcription-repair-coupling factor	mfd
D4K88_RS07795	P51130	UCRI_BRADU	Ubiquinol-cytochrome c reductase iron-sulfur subunit	petA
D4K88_RS07800	P05418	CYB_PARDE	Cytochrome b	petB
D4K88_RS07805	*			
D4K88_RS07810	*			
D4K88_RS07815	*			
D4K88_RS07820	P59696	T200_SALTY	Transposase for insertion sequence element IS200	tnpA6
D4K88_RS07825	P54992	YSNA_STRPR	Putative transposase in snaA-snaB intergenic region	ysmB
D4K88_RS07835	O26061	THYX_HELPY	Flavin-dependent thymidylate synthase	thyX
D4K88_RS07840	O26060	GLMS_HELPY	Glutamine--fructose-6-phosphate aminotransferase [isomerizing]	glmS
D4K88_RS07845	P64665	Y1531_HELPY	Uncharacterized protein HP_1531	wbbL2
D4K88_RS07850	*			
