locus-tag class description HPKB_RS00005 PF01029 NusB family HPKB_RS00010 PF00885 6,7-dimethyl-8-ribityllumazine synthase HPKB_RS00015 PF00793 DAHP synthetase I family HPKB_RS00020 PF00484 Carbonic anhydrase HPKB_RS00025 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HPKB_RS00030 PF02569 Pantoate-beta-alanine ligase HPKB_RS00070 PF00118 TCP-1/cpn60 chaperonin family HPKB_RS00075 PF00166 Chaperonin 10 Kd subunit HPKB_RS00115 PF01584 CheW-like domain HPKB_RS00115 PF00072 Response regulator receiver domain HPKB_RS00120 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HPKB_RS00125 PF01569 PAP2 superfamily HPKB_RS00130 PF08019 Phosphoethanolamine transferase EptA/EptB HPKB_RS00130 PF00884 Sulfatase HPKB_RS00145 PF01842 ACT domain HPKB_RS00145 PF02153 Prephenate dehydrogenase HPKB_RS00150 PF05362 Lon protease (S16) C-terminal proteolytic domain HPKB_RS00150 PF02190 ATP-dependent protease La (LON) substrate-binding domain HPKB_RS00150 PF00004 ATPase family associated with various cellular activities (AAA) HPKB_RS00155 PF13525 Outer membrane lipoprotein HPKB_RS00160 PF02623 FliW protein HPKB_RS00165 PF07977 FabA-like domain HPKB_RS00170 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HPKB_RS00170 PF00132 Bacterial transferase hexapeptide (six repeats) HPKB_RS00175 PF10431 C-terminal, D2-small domain, of ClpB protein HPKB_RS00175 PF07724 AAA domain (Cdc48 subfamily) HPKB_RS00190 PF00486 Transcriptional regulatory protein, C terminal HPKB_RS00190 PF00072 Response regulator receiver domain HPKB_RS00195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPKB_RS00200 PF01256 Carbohydrate kinase HPKB_RS00200 PF03853 YjeF-related protein N-terminus HPKB_RS00205 PF00772 DnaB-like helicase N terminal domain HPKB_RS00205 PF03796 DnaB-like helicase C terminal domain HPKB_RS00215 PF01040 UbiA prenyltransferase family HPKB_RS00230 PF02666 Phosphatidylserine decarboxylase HPKB_RS00235 PF02445 Quinolinate synthetase A protein HPKB_RS00240 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HPKB_RS00240 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HPKB_RS00250 PF01555 DNA methylase HPKB_RS00250 PF18755 Restriction Enzyme Adenine Methylase Associated HPKB_RS00260 PF13180 PDZ domain HPKB_RS00260 PF03572 Peptidase family S41 HPKB_RS00270 PF01553 Acyltransferase HPKB_RS00275 PF03167 Uracil DNA glycosylase superfamily HPKB_RS00280 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HPKB_RS00280 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HPKB_RS00285 PF00162 Phosphoglycerate kinase HPKB_RS00290 PF01544 CorA-like Mg2+ transporter protein HPKB_RS00295 PF03741 Integral membrane protein TerC family HPKB_RS00305 PF01555 DNA methylase HPKB_RS00310 PF01381 Helix-turn-helix HPKB_RS00310 PF00145 C-5 cytosine-specific DNA methylase HPKB_RS00325 PF00474 Sodium:solute symporter family HPKB_RS00330 PF18327 Proline utilization A proline dehydrogenase N-terminal domain HPKB_RS00330 PF00171 Aldehyde dehydrogenase family HPKB_RS00330 PF14850 DNA-binding domain of Proline dehydrogenase HPKB_RS00330 PF01619 Proline dehydrogenase HPKB_RS00395 PF01774 UreD urease accessory protein HPKB_RS00400 PF02492 CobW/HypB/UreG, nucleotide-binding domain HPKB_RS00405 PF01730 UreF HPKB_RS00410 PF05194 UreE urease accessory protein, C-terminal domain HPKB_RS00410 PF02814 UreE urease accessory protein, N-terminal domain HPKB_RS00415 PF02293 AmiS/UreI family transporter HPKB_RS00425 PF00449 Urease alpha-subunit, N-terminal domain HPKB_RS00425 PF01979 Amidohydrolase family HPKB_RS00430 PF00699 Urease beta subunit HPKB_RS00430 PF00547 Urease, gamma subunit HPKB_RS00440 PF01252 Signal peptidase (SPase) II HPKB_RS00445 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HPKB_RS00445 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HPKB_RS00445 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HPKB_RS00445 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HPKB_RS00450 PF01649 Ribosomal protein S20 HPKB_RS00455 PF03462 PCRF domain HPKB_RS00455 PF00472 RF-1 domain HPKB_RS00480 PF00672 HAMP domain HPKB_RS00480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPKB_RS00480 PF17200 Single Cache domain 2 HPKB_RS00485 PF00380 Ribosomal protein S9/S16 HPKB_RS00490 PF00572 Ribosomal protein L13 HPKB_RS00495 PF17402 Family of unknown function (DUF5408) HPKB_RS00500 PF06039 Malate:quinone oxidoreductase (Mqo) HPKB_RS00510 PF04542 Sigma-70 region 2 HPKB_RS00510 PF04539 Sigma-70 region 3 HPKB_RS00510 PF00140 Sigma-70 factor, region 1.2 HPKB_RS00510 PF04545 Sigma-70, region 4 HPKB_RS00515 PF01048 Phosphorylase superfamily HPKB_RS00520 PF00698 Acyl transferase domain HPKB_RS00530 PF04556 DpnII restriction endonuclease HPKB_RS00535 PF01555 DNA methylase HPKB_RS00540 PF01531 Glycosyl transferase family 11 HPKB_RS00555 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPKB_RS00555 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HPKB_RS00565 PF00291 Pyridoxal-phosphate dependent enzyme HPKB_RS00570 PF16591 Helical bimodular sensor domain HPKB_RS00570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPKB_RS00570 PF00672 HAMP domain HPKB_RS00575 PF02677 Epoxyqueuosine reductase QueH HPKB_RS00585 PF00535 Glycosyl transferase family 2 HPKB_RS00590 PF00672 HAMP domain HPKB_RS00590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPKB_RS00590 PF12729 Four helix bundle sensory module for signal transduction HPKB_RS00595 PF02872 5'-nucleotidase, C-terminal domain HPKB_RS00595 PF00149 Calcineurin-like phosphoesterase HPKB_RS00600 PF02664 S-Ribosylhomocysteinase (LuxS) HPKB_RS00605 PF01053 Cys/Met metabolism PLP-dependent enzyme HPKB_RS00610 PF00291 Pyridoxal-phosphate dependent enzyme HPKB_RS00615 PF00012 Hsp70 protein HPKB_RS00620 PF01025 GrpE HPKB_RS00645 PF07196 Flagellin hook IN motif HPKB_RS00645 PF00669 Bacterial flagellin N-terminal helical region HPKB_RS00645 PF00700 Bacterial flagellin C-terminal helical region HPKB_RS00650 PF01751 Toprim domain HPKB_RS00650 PF01396 Topoisomerase DNA binding C4 zinc finger HPKB_RS00650 PF01131 DNA topoisomerase HPKB_RS00655 PF04055 Radical SAM superfamily HPKB_RS00665 PF00391 PEP-utilising enzyme, mobile domain HPKB_RS00665 PF02896 PEP-utilising enzyme, TIM barrel domain HPKB_RS00665 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HPKB_RS00675 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HPKB_RS00675 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HPKB_RS00675 PF03129 Anticodon binding domain HPKB_RS00680 PF00707 Translation initiation factor IF-3, C-terminal domain HPKB_RS00680 PF05198 Translation initiation factor IF-3, N-terminal domain HPKB_RS00685 PF01632 Ribosomal protein L35 HPKB_RS00690 PF00453 Ribosomal protein L20 HPKB_RS00715 PF03315 Serine dehydratase beta chain HPKB_RS00715 PF03313 Serine dehydratase alpha chain HPKB_RS00720 PF03222 Tryptophan/tyrosine permease family HPKB_RS00725 PF01474 Class-II DAHP synthetase family HPKB_RS00735 PF00578 AhpC/TSA family HPKB_RS00740 PF02589 LUD domain HPKB_RS00745 PF11870 Domain of unknown function (DUF3390) HPKB_RS00745 PF13183 4Fe-4S dicluster domain HPKB_RS00745 PF02589 LUD domain HPKB_RS00750 PF02754 Cysteine-rich domain HPKB_RS00755 PF02652 L-lactate permease HPKB_RS00760 PF02652 L-lactate permease HPKB_RS00765 PF00633 Helix-hairpin-helix motif HPKB_RS00765 PF00730 HhH-GPD superfamily base excision DNA repair protein HPKB_RS00765 PF14815 NUDIX domain HPKB_RS00770 PF00939 Sodium:sulfate symporter transmembrane region HPKB_RS00775 PF00115 Cytochrome C and Quinol oxidase polypeptide I HPKB_RS00790 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HPKB_RS00790 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP HPKB_RS00820 PF00154 recA bacterial DNA recombination protein HPKB_RS00825 PF03952 Enolase, N-terminal domain HPKB_RS00825 PF00113 Enolase, C-terminal TIM barrel domain HPKB_RS00840 PF01202 Shikimate kinase HPKB_RS00855 PF08238 Sel1 repeat HPKB_RS00860 PF01709 Transcriptional regulator HPKB_RS00865 PF00490 Delta-aminolevulinic acid dehydratase HPKB_RS00875 PF00072 Response regulator receiver domain HPKB_RS00875 PF00486 Transcriptional regulatory protein, C terminal HPKB_RS00890 PF01136 Peptidase family U32 HPKB_RS00900 PF00472 RF-1 domain HPKB_RS00900 PF03462 PCRF domain HPKB_RS00910 PF00994 Probable molybdopterin binding domain HPKB_RS00910 PF03454 MoeA C-terminal region (domain IV) HPKB_RS00910 PF03453 MoeA N-terminal region (domain I and II) HPKB_RS00925 PF00639 PPIC-type PPIASE domain HPKB_RS00930 PF01116 Fructose-bisphosphate aldolase class-II HPKB_RS00935 PF01132 Elongation factor P (EF-P) OB domain HPKB_RS00935 PF08207 Elongation factor P (EF-P) KOW-like domain HPKB_RS00935 PF09285 Elongation factor P, C-terminal HPKB_RS00955 PF03102 NeuB family HPKB_RS00955 PF08666 SAF domain HPKB_RS00960 PF00005 ABC transporter HPKB_RS00965 PF00795 Carbon-nitrogen hydrolase HPKB_RS00975 PF01336 OB-fold nucleic acid binding domain HPKB_RS00975 PF00152 tRNA synthetases class II (D, K and N) HPKB_RS00980 PF00464 Serine hydroxymethyltransferase HPKB_RS01010 PF03350 Uncharacterized protein family, UPF0114 HPKB_RS01015 PF13091 PLD-like domain HPKB_RS01020 PF13183 4Fe-4S dicluster domain HPKB_RS01020 PF13085 2Fe-2S iron-sulfur cluster binding domain HPKB_RS01025 PF00890 FAD binding domain HPKB_RS01025 PF02910 Fumarate reductase flavoprotein C-term HPKB_RS01030 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HPKB_RS01035 PF00121 Triosephosphate isomerase HPKB_RS01045 PF00132 Bacterial transferase hexapeptide (six repeats) HPKB_RS01045 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HPKB_RS01050 PF02772 S-adenosylmethionine synthetase, central domain HPKB_RS01050 PF02773 S-adenosylmethionine synthetase, C-terminal domain HPKB_RS01050 PF00438 S-adenosylmethionine synthetase, N-terminal domain HPKB_RS01055 PF00334 Nucleoside diphosphate kinase HPKB_RS01065 PF01783 Ribosomal L32p protein family HPKB_RS01075 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HPKB_RS01075 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HPKB_RS01095 PF10609 NUBPL iron-transfer P-loop NTPase HPKB_RS01095 PF01883 Iron-sulfur cluster assembly protein HPKB_RS01115 PF00183 Hsp90 protein HPKB_RS01120 PF08238 Sel1 repeat HPKB_RS01125 PF07687 Peptidase dimerisation domain HPKB_RS01125 PF01546 Peptidase family M20/M25/M40 HPKB_RS01135 PF00939 Sodium:sulfate symporter transmembrane region HPKB_RS01145 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HPKB_RS01145 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HPKB_RS01145 PF13288 DXP reductoisomerase C-terminal domain HPKB_RS01160 PF01161 Phosphatidylethanolamine-binding protein HPKB_RS01170 PF00266 Aminotransferase class-V HPKB_RS01175 PF01106 NifU-like domain HPKB_RS01175 PF04324 BFD-like [2Fe-2S] binding domain HPKB_RS01175 PF01592 NifU-like N terminal domain HPKB_RS01185 PF18073 Rubredoxin metal binding domain HPKB_RS01190 PF01641 SelR domain HPKB_RS01190 PF01625 Peptide methionine sulfoxide reductase HPKB_RS01195 PF01925 Sulfite exporter TauE/SafE HPKB_RS01205 PF00916 Sulfate permease family HPKB_RS01205 PF01740 STAS domain HPKB_RS01220 PF02348 Cytidylyltransferase HPKB_RS01235 PF03738 Glutathionylspermidine synthase preATP-grasp HPKB_RS01245 PF08238 Sel1 repeat HPKB_RS01245 PF13176 Tetratricopeptide repeat HPKB_RS01245 PF13181 Tetratricopeptide repeat HPKB_RS01255 PF03900 Porphobilinogen deaminase, C-terminal domain HPKB_RS01255 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HPKB_RS01260 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HPKB_RS01260 PF04073 Aminoacyl-tRNA editing domain HPKB_RS01260 PF03129 Anticodon binding domain HPKB_RS01265 PF01488 Shikimate / quinate 5-dehydrogenase HPKB_RS01265 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HPKB_RS01265 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HPKB_RS01270 PF00348 Polyprenyl synthetase HPKB_RS01285 PF00210 Ferritin-like domain HPKB_RS01290 PF00512 His Kinase A (phospho-acceptor) domain HPKB_RS01290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPKB_RS01300 PF02119 Flagellar P-ring protein HPKB_RS01305 PF00270 DEAD/DEAH box helicase HPKB_RS01305 PF00271 Helicase conserved C-terminal domain HPKB_RS01320 PF00005 ABC transporter HPKB_RS01320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPKB_RS01325 PF00528 Binding-protein-dependent transport system inner membrane component HPKB_RS01325 PF12911 N-terminal TM domain of oligopeptide transport permease C HPKB_RS01345 PF00709 Adenylosuccinate synthetase HPKB_RS01360 PF02163 Peptidase family M50 HPKB_RS01365 PF02601 Exonuclease VII, large subunit HPKB_RS01365 PF13742 OB-fold nucleic acid binding domain HPKB_RS01385 PF01555 DNA methylase HPKB_RS01390 PF07724 AAA domain (Cdc48 subfamily) HPKB_RS01390 PF02861 Clp amino terminal domain, pathogenicity island component HPKB_RS01390 PF17871 AAA lid domain HPKB_RS01390 PF10431 C-terminal, D2-small domain, of ClpB protein HPKB_RS01390 PF00004 ATPase family associated with various cellular activities (AAA) HPKB_RS01395 PF02683 Cytochrome C biogenesis protein transmembrane region HPKB_RS01400 PF01979 Amidohydrolase family HPKB_RS01405 PF01979 Amidohydrolase family HPKB_RS01415 PF00919 Uncharacterized protein family UPF0004 HPKB_RS01415 PF04055 Radical SAM superfamily HPKB_RS01440 PF03692 Putative zinc- or iron-chelating domain HPKB_RS01450 PF00218 Indole-3-glycerol phosphate synthase HPKB_RS01460 PF02541 Ppx/GppA phosphatase family HPKB_RS01465 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HPKB_RS01475 PF01702 Queuine tRNA-ribosyltransferase HPKB_RS01485 PF01761 3-dehydroquinate synthase HPKB_RS01495 PF00919 Uncharacterized protein family UPF0004 HPKB_RS01495 PF04055 Radical SAM superfamily HPKB_RS01500 PF01434 Peptidase family M41 HPKB_RS01500 PF17862 AAA+ lid domain HPKB_RS01500 PF00004 ATPase family associated with various cellular activities (AAA) HPKB_RS01515 PF02691 Vacuolating cyotoxin HPKB_RS01515 PF03797 Autotransporter beta-domain HPKB_RS01520 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HPKB_RS01520 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HPKB_RS01535 PF04715 Anthranilate synthase component I, N terminal region HPKB_RS01535 PF00425 chorismate binding enzyme HPKB_RS01540 PF00795 Carbon-nitrogen hydrolase HPKB_RS01550 PF00829 Ribosomal prokaryotic L21 protein HPKB_RS01555 PF01016 Ribosomal L27 protein HPKB_RS01560 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPKB_RS01565 PF00528 Binding-protein-dependent transport system inner membrane component HPKB_RS01570 PF12911 N-terminal TM domain of oligopeptide transport permease C HPKB_RS01570 PF00528 Binding-protein-dependent transport system inner membrane component HPKB_RS01575 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPKB_RS01575 PF00005 ABC transporter HPKB_RS01580 PF00005 ABC transporter HPKB_RS01580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPKB_RS01585 PF01926 50S ribosome-binding GTPase HPKB_RS01585 PF01018 GTP1/OBG HPKB_RS01600 PF00202 Aminotransferase class-III HPKB_RS01615 PF00795 Carbon-nitrogen hydrolase HPKB_RS01620 PF01522 Polysaccharide deacetylase HPKB_RS01630 PF02492 CobW/HypB/UreG, nucleotide-binding domain HPKB_RS01630 PF07683 Cobalamin synthesis protein cobW C-terminal domain HPKB_RS01640 PF10615 Protein of unknown function (DUF2470) HPKB_RS01640 PF01243 Pyridoxamine 5'-phosphate oxidase HPKB_RS01645 PF03485 Arginyl tRNA synthetase N terminal domain HPKB_RS01645 PF00750 tRNA synthetases class I (R) HPKB_RS01645 PF05746 DALR anticodon binding domain HPKB_RS01650 PF02416 mttA/Hcf106 family HPKB_RS01655 PF00625 Guanylate kinase HPKB_RS01675 PF02107 Flagellar L-ring protein HPKB_RS01680 PF02348 Cytidylyltransferase HPKB_RS01685 PF02348 Cytidylyltransferase HPKB_RS01695 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HPKB_RS01700 PF02540 NAD synthase HPKB_RS01710 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HPKB_RS01710 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HPKB_RS01715 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HPKB_RS01720 PF03776 Septum formation topological specificity factor MinE HPKB_RS01725 PF02481 DNA recombination-mediator protein A HPKB_RS01725 PF17782 DprA winged helix domain HPKB_RS01730 PF03652 Holliday junction resolvase HPKB_RS01785 PF00849 RNA pseudouridylate synthase HPKB_RS01790 PF01368 DHH family HPKB_RS01790 PF02272 DHHA1 domain HPKB_RS01790 PF17768 RecJ OB domain HPKB_RS01790 PF10141 Single-strand DNA-specific exonuclease, C terminal domain HPKB_RS01795 PF00117 Glutamine amidotransferase class-I HPKB_RS01795 PF06418 CTP synthase N-terminus HPKB_RS01805 PF08345 Flagellar M-ring protein C-terminal HPKB_RS01805 PF01514 Secretory protein of YscJ/FliF family HPKB_RS01810 PF01706 FliG C-terminal domain HPKB_RS01810 PF14841 FliG middle domain HPKB_RS01810 PF14842 FliG N-terminal domain HPKB_RS01820 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HPKB_RS01820 PF02780 Transketolase, C-terminal domain HPKB_RS01820 PF02779 Transketolase, pyrimidine binding domain HPKB_RS01825 PF00679 Elongation factor G C-terminus HPKB_RS01825 PF06421 GTP-binding protein LepA C-terminus HPKB_RS01825 PF00009 Elongation factor Tu GTP binding domain HPKB_RS01825 PF03144 Elongation factor Tu domain 2 HPKB_RS01830 PF00145 C-5 cytosine-specific DNA methylase HPKB_RS01845 PF00460 Flagella basal body rod protein HPKB_RS01845 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPKB_RS01850 PF00083 Sugar (and other) transporter HPKB_RS01855 PF17854 FtsK alpha domain HPKB_RS01855 PF09397 Ftsk gamma domain HPKB_RS01855 PF01580 FtsK/SpoIIIE family HPKB_RS01865 PF00456 Transketolase, thiamine diphosphate binding domain HPKB_RS01865 PF02779 Transketolase, pyrimidine binding domain HPKB_RS01865 PF02780 Transketolase, C-terminal domain HPKB_RS01870 PF06574 FAD synthetase HPKB_RS01870 PF01687 Riboflavin kinase HPKB_RS01885 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HPKB_RS01885 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HPKB_RS01895 PF00664 ABC transporter transmembrane region HPKB_RS01895 PF00005 ABC transporter HPKB_RS01910 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system HPKB_RS01920 PF03824 High-affinity nickel-transport protein HPKB_RS01940 PF00403 Heavy-metal-associated domain HPKB_RS01945 PF00403 Heavy-metal-associated domain HPKB_RS01950 PF01066 CDP-alcohol phosphatidyltransferase HPKB_RS01960 PF00004 ATPase family associated with various cellular activities (AAA) HPKB_RS01960 PF17862 AAA+ lid domain HPKB_RS01960 PF01434 Peptidase family M41 HPKB_RS01970 PF00072 Response regulator receiver domain HPKB_RS01995 PF02527 rRNA small subunit methyltransferase G HPKB_RS02000 PF02547 Queuosine biosynthesis protein HPKB_RS02005 PF00902 Sec-independent protein translocase protein (TatC) HPKB_RS02015 PF17864 RuvB AAA lid domain HPKB_RS02015 PF05491 RuvB C-terminal winged helix domain HPKB_RS02015 PF05496 Holliday junction DNA helicase RuvB P-loop domain HPKB_RS02020 PF02548 Ketopantoate hydroxymethyltransferase HPKB_RS02045 PF03775 Septum formation inhibitor MinC, C-terminal domain HPKB_RS02050 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HPKB_RS02060 PF00288 GHMP kinases N terminal domain HPKB_RS02070 PF04760 Translation initiation factor IF-2, N-terminal region HPKB_RS02070 PF00009 Elongation factor Tu GTP binding domain HPKB_RS02070 PF11987 Translation-initiation factor 2 HPKB_RS02075 PF02033 Ribosome-binding factor A HPKB_RS02080 PF17384 RimP C-terminal SH3 domain HPKB_RS02080 PF02576 RimP N-terminal domain HPKB_RS02085 PF16177 Acetyl-coenzyme A synthetase N-terminus HPKB_RS02085 PF00501 AMP-binding enzyme HPKB_RS02085 PF13193 AMP-binding enzyme C-terminal domain HPKB_RS02090 PF00149 Calcineurin-like phosphoesterase HPKB_RS02095 PF00486 Transcriptional regulatory protein, C terminal HPKB_RS02095 PF00072 Response regulator receiver domain HPKB_RS02105 PF00771 FHIPEP family HPKB_RS02110 PF00312 Ribosomal protein S15 HPKB_RS02120 PF01220 Dehydroquinase class II HPKB_RS02125 PF01321 Creatinase/Prolidase N-terminal domain HPKB_RS02125 PF00557 Metallopeptidase family M24 HPKB_RS02130 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HPKB_RS02140 PF10609 NUBPL iron-transfer P-loop NTPase HPKB_RS02150 PF04542 Sigma-70 region 2 HPKB_RS02150 PF04539 Sigma-70 region 3 HPKB_RS02150 PF04545 Sigma-70, region 4 HPKB_RS02155 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HPKB_RS02155 PF02154 Flagellar motor switch protein FliM HPKB_RS02160 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HPKB_RS02160 PF04509 CheC-like family HPKB_RS02175 PF01475 Ferric uptake regulator family HPKB_RS02180 PF05496 Holliday junction DNA helicase RuvB P-loop domain HPKB_RS02180 PF16193 AAA C-terminal domain HPKB_RS02180 PF12002 MgsA AAA+ ATPase C terminal HPKB_RS02180 PF01661 Macro domain HPKB_RS02185 PF13411 MerR HTH family regulatory protein HPKB_RS02190 PF00226 DnaJ domain HPKB_RS02190 PF01556 DnaJ C terminal domain HPKB_RS02200 PF01612 3'-5' exonuclease HPKB_RS02200 PF00476 DNA polymerase family A HPKB_RS02200 PF01367 5'-3' exonuclease, C-terminal SAM fold HPKB_RS02200 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HPKB_RS02205 PF00486 Transcriptional regulatory protein, C terminal HPKB_RS02205 PF00072 Response regulator receiver domain HPKB_RS02210 PF02542 YgbB family HPKB_RS02210 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HPKB_RS02215 PF17820 PDZ domain HPKB_RS02215 PF13180 PDZ domain HPKB_RS02220 PF00324 Amino acid permease HPKB_RS02225 PF01066 CDP-alcohol phosphatidyltransferase HPKB_RS02240 PF00701 Dihydrodipicolinate synthetase family HPKB_RS02250 PF01180 Dihydroorotate dehydrogenase HPKB_RS02255 PF02503 Polyphosphate kinase middle domain HPKB_RS02255 PF13089 Polyphosphate kinase N-terminal domain HPKB_RS02255 PF17941 Polyphosphate kinase C-terminal domain 1 HPKB_RS02255 PF13090 Polyphosphate kinase C-terminal domain 2 HPKB_RS02275 PF11867 Domain of unknown function (DUF3387) HPKB_RS02275 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HPKB_RS02275 PF18766 SWI2/SNF2 ATPase HPKB_RS02310 PF00999 Sodium/hydrogen exchanger family HPKB_RS02310 PF02254 TrkA-N domain HPKB_RS02335 PF08402 TOBE domain HPKB_RS02335 PF00005 ABC transporter HPKB_RS02340 PF00749 tRNA synthetases class I (E and Q), catalytic domain HPKB_RS02350 PF02384 N-6 DNA Methylase HPKB_RS02360 PF00009 Elongation factor Tu GTP binding domain HPKB_RS02360 PF00679 Elongation factor G C-terminus HPKB_RS02360 PF03144 Elongation factor Tu domain 2 HPKB_RS02375 PF00145 C-5 cytosine-specific DNA methylase HPKB_RS02415 PF02075 Crossover junction endodeoxyribonuclease RuvC HPKB_RS02420 PF00593 TonB dependent receptor HPKB_RS02420 PF07715 TonB-dependent Receptor Plug Domain HPKB_RS02425 PF06628 Catalase-related immune-responsive HPKB_RS02425 PF00199 Catalase HPKB_RS02440 PF03831 PhnA domain HPKB_RS02440 PF08274 PhnA Zinc-Ribbon HPKB_RS02445 PF02611 CDP-diacylglycerol pyrophosphatase HPKB_RS02450 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPKB_RS02450 PF07559 Flagellar basal body protein FlaE HPKB_RS02450 PF07196 Flagellin hook IN motif HPKB_RS02450 PF00460 Flagella basal body rod protein HPKB_RS02455 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA HPKB_RS02465 PF02684 Lipid-A-disaccharide synthetase HPKB_RS02470 PF03449 Transcription elongation factor, N-terminal HPKB_RS02470 PF01272 Transcription elongation factor, GreA/GreB, C-term HPKB_RS02475 PF00692 dUTPase HPKB_RS02485 PF15437 Plasminogen-binding protein pgbA C-terminal HPKB_RS02490 PF03309 Type III pantothenate kinase HPKB_RS02505 PF01370 NAD dependent epimerase/dehydratase family HPKB_RS02510 PF00294 pfkB family carbohydrate kinase HPKB_RS02510 PF01467 Cytidylyltransferase-like HPKB_RS02515 PF13580 SIS domain HPKB_RS02520 PF00478 IMP dehydrogenase / GMP reductase domain HPKB_RS02535 PF01569 PAP2 superfamily HPKB_RS02540 PF02384 N-6 DNA Methylase HPKB_RS02540 PF12161 HsdM N-terminal domain HPKB_RS02545 PF01420 Type I restriction modification DNA specificity domain HPKB_RS02550 PF12008 Type I restriction and modification enzyme - subunit R C terminal HPKB_RS02550 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HPKB_RS02550 PF18766 SWI2/SNF2 ATPase HPKB_RS02555 PF02110 Hydroxyethylthiazole kinase family HPKB_RS02560 PF08543 Phosphomethylpyrimidine kinase HPKB_RS02565 PF02581 Thiamine monophosphate synthase HPKB_RS02575 PF02441 Flavoprotein HPKB_RS02575 PF04127 DNA / pantothenate metabolism flavoprotein HPKB_RS02580 PF02719 Polysaccharide biosynthesis protein HPKB_RS02610 PF00216 Bacterial DNA-binding protein HPKB_RS02625 PF17284 Spermidine synthase tetramerisation domain HPKB_RS02630 PF01121 Dephospho-CoA kinase HPKB_RS02635 PF01425 Amidase HPKB_RS02640 PF00571 CBS domain HPKB_RS02640 PF00478 IMP dehydrogenase / GMP reductase domain HPKB_RS02645 PF00119 ATP synthase A chain HPKB_RS02650 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HPKB_RS02660 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPKB_RS02665 PF00085 Thioredoxin HPKB_RS02670 PF02021 Uncharacterised protein family UPF0102 HPKB_RS02675 PF01842 ACT domain HPKB_RS02675 PF03447 Homoserine dehydrogenase, NAD binding domain HPKB_RS02675 PF00742 Homoserine dehydrogenase HPKB_RS02680 PF01541 GIY-YIG catalytic domain HPKB_RS02680 PF08459 UvrC Helix-hairpin-helix N-terminal HPKB_RS02680 PF02151 UvrB/uvrC motif HPKB_RS02695 PF00005 ABC transporter HPKB_RS02695 PF00571 CBS domain HPKB_RS02700 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HPKB_RS02720 PF00691 OmpA family HPKB_RS02720 PF13677 Membrane MotB of proton-channel complex MotA/MotB HPKB_RS02725 PF01618 MotA/TolQ/ExbB proton channel family HPKB_RS02730 PF00899 ThiF family HPKB_RS02735 PF00753 Metallo-beta-lactamase superfamily HPKB_RS02755 PF03748 Flagellar basal body-associated protein FliL HPKB_RS02760 PF01648 4'-phosphopantetheinyl transferase superfamily HPKB_RS02780 PF00925 GTP cyclohydrolase II HPKB_RS02780 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HPKB_RS02790 PF00925 GTP cyclohydrolase II HPKB_RS02800 PF02391 MoaE protein HPKB_RS02805 PF00994 Probable molybdopterin binding domain HPKB_RS02810 PF01967 MoaC family HPKB_RS02815 PF05211 Neuraminyllactose-binding hemagglutinin precursor (NLBH) HPKB_RS02825 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPKB_RS02825 PF05698 Bacterial trigger factor protein (TF) C-terminus HPKB_RS02825 PF05697 Bacterial trigger factor protein (TF) HPKB_RS02830 PF00574 Clp protease HPKB_RS02835 PF01327 Polypeptide deformylase HPKB_RS02840 PF13335 Magnesium chelatase, subunit ChlI C-terminal HPKB_RS02840 PF01078 Magnesium chelatase, subunit ChlI HPKB_RS02845 PF00403 Heavy-metal-associated domain HPKB_RS02875 PF01043 SecA preprotein cross-linking domain HPKB_RS02875 PF07517 SecA DEAD-like domain HPKB_RS02875 PF07516 SecA Wing and Scaffold domain HPKB_RS02875 PF02810 SEC-C motif HPKB_RS02880 PF03548 Outer membrane lipoprotein carrier protein LolA HPKB_RS02920 PF00696 Amino acid kinase family HPKB_RS02925 PF01192 RNA polymerase Rpb6 HPKB_RS02930 PF04607 Region found in RelA / SpoT proteins HPKB_RS02930 PF02824 TGS domain HPKB_RS02930 PF13291 ACT domain HPKB_RS02935 PF00579 tRNA synthetases class I (W and Y) HPKB_RS02935 PF01479 S4 domain HPKB_RS02940 PF00162 Phosphoglycerate kinase HPKB_RS02945 PF01520 N-acetylmuramoyl-L-alanine amidase HPKB_RS02955 PF01312 FlhB HrpN YscU SpaS Family HPKB_RS02980 PF00448 SRP54-type protein, GTPase domain HPKB_RS02995 PF00013 KH domain HPKB_RS02995 PF12072 Domain of unknown function (DUF3552) HPKB_RS02995 PF01966 HD domain HPKB_RS03000 PF01554 MatE HPKB_RS03005 PF03553 Na+/H+ antiporter family HPKB_RS03005 PF13726 Na+-H+ antiporter family HPKB_RS03010 PF00795 Carbon-nitrogen hydrolase HPKB_RS03020 PF00581 Rhodanese-like domain HPKB_RS03020 PF00899 ThiF family HPKB_RS03030 PF02561 Flagellar protein FliS HPKB_RS03035 PF02465 Flagellar hook-associated protein 2 N-terminus HPKB_RS03035 PF07195 Flagellar hook-associated protein 2 C-terminus HPKB_RS03055 PF00005 ABC transporter HPKB_RS03060 PF02390 Putative methyltransferase HPKB_RS03070 PF00849 RNA pseudouridylate synthase HPKB_RS03070 PF01479 S4 domain HPKB_RS03075 PF03193 RsgA GTPase HPKB_RS03075 PF16745 RsgA N-terminal domain HPKB_RS03085 PF14572 Phosphoribosyl synthetase-associated domain HPKB_RS03085 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HPKB_RS03090 PF01230 HIT domain HPKB_RS03095 PF01225 Mur ligase family, catalytic domain HPKB_RS03095 PF02875 Mur ligase family, glutamate ligase domain HPKB_RS03095 PF08245 Mur ligase middle domain HPKB_RS03105 PF07478 D-ala D-ala ligase C-terminus HPKB_RS03105 PF01820 D-ala D-ala ligase N-terminus HPKB_RS03110 PF04608 Phosphatidylglycerophosphatase A HPKB_RS03115 PF00266 Aminotransferase class-V HPKB_RS03120 PF00156 Phosphoribosyl transferase domain HPKB_RS03125 PF04055 Radical SAM superfamily HPKB_RS03125 PF00919 Uncharacterized protein family UPF0004 HPKB_RS03160 PF01171 PP-loop family HPKB_RS03165 PF01207 Dihydrouridine synthase (Dus) HPKB_RS03185 PF17763 Glutaminase/Asparaginase C-terminal domain HPKB_RS03185 PF00710 Asparaginase, N-terminal HPKB_RS03190 PF03605 Anaerobic c4-dicarboxylate membrane transporter HPKB_RS03215 PF01810 LysE type translocator HPKB_RS03220 PF12169 DNA polymerase III subunits gamma and tau domain III HPKB_RS03220 PF12170 DNA polymerase III tau subunit V interacting with alpha HPKB_RS03230 PF00005 ABC transporter HPKB_RS03230 PF12399 Branched-chain amino acid ATP-binding cassette transporter HPKB_RS03235 PF04963 Sigma-54 factor, core binding domain HPKB_RS03235 PF04552 Sigma-54, DNA binding domain HPKB_RS03235 PF00309 Sigma-54 factor, Activator interacting domain (AID) HPKB_RS03250 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase HPKB_RS03260 PF01795 MraW methylase family HPKB_RS03270 PF17760 UvrA interaction domain HPKB_RS03270 PF17755 UvrA DNA-binding domain HPKB_RS03270 PF00005 ABC transporter HPKB_RS03280 PF00072 Response regulator receiver domain HPKB_RS03280 PF00158 Sigma-54 interaction domain HPKB_RS03290 PF00521 DNA gyrase/topoisomerase IV, subunit A HPKB_RS03290 PF03989 DNA gyrase C-terminal domain, beta-propeller HPKB_RS03295 PF01219 Prokaryotic diacylglycerol kinase HPKB_RS03310 PF08882 Acetone carboxylase gamma subunit HPKB_RS03315 PF02538 Hydantoinase B/oxoprolinase HPKB_RS03320 PF01968 Hydantoinase/oxoprolinase HPKB_RS03320 PF05378 Hydantoinase/oxoprolinase N-terminal region HPKB_RS03330 PF02667 Short chain fatty acid transporter HPKB_RS03335 PF01144 Coenzyme A transferase HPKB_RS03340 PF01144 Coenzyme A transferase HPKB_RS03345 PF02803 Thiolase, C-terminal domain HPKB_RS03345 PF00108 Thiolase, N-terminal domain HPKB_RS03360 PF01555 DNA methylase HPKB_RS03370 PF07664 Ferrous iron transport protein B C terminus HPKB_RS03370 PF07670 Nucleoside recognition HPKB_RS03370 PF02421 Ferrous iron transport protein B HPKB_RS03380 PF00813 FliP family HPKB_RS03390 PF14602 Hexapeptide repeat of succinyl-transferase HPKB_RS03390 PF12804 MobA-like NTP transferase domain HPKB_RS03405 PF00317 Ribonucleotide reductase, all-alpha domain HPKB_RS03405 PF02867 Ribonucleotide reductase, barrel domain HPKB_RS03405 PF03477 ATP cone domain HPKB_RS03410 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HPKB_RS03410 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HPKB_RS03415 PF01925 Sulfite exporter TauE/SafE HPKB_RS03420 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HPKB_RS03420 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HPKB_RS03425 PF18644 Phage integrase SAM-like domain HPKB_RS03425 PF00589 Phage integrase family HPKB_RS03435 PF00155 Aminotransferase class I and II HPKB_RS03455 PF02754 Cysteine-rich domain HPKB_RS03460 PF06969 HemN C-terminal domain HPKB_RS03460 PF04055 Radical SAM superfamily HPKB_RS03465 PF10788 Protein of unknown function (DUF2603) HPKB_RS03470 PF01264 Chorismate synthase HPKB_RS03475 PF00035 Double-stranded RNA binding motif HPKB_RS03475 PF14622 Ribonuclease-III-like HPKB_RS03480 PF00075 RNase H HPKB_RS03495 PF02637 GatB domain HPKB_RS03495 PF02934 GatB/GatE catalytic domain HPKB_RS03505 PF04055 Radical SAM superfamily HPKB_RS03510 PF01103 Surface antigen HPKB_RS03510 PF07244 Surface antigen variable number repeat HPKB_RS03515 PF04055 Radical SAM superfamily HPKB_RS03520 PF00210 Ferritin-like domain HPKB_RS03530 PF00852 Glycosyltransferase family 10 (fucosyltransferase) C-term HPKB_RS03530 PF18025 Alpha-(1,3)-fucosyltransferase FucT N-terminal domain HPKB_RS03535 PF00852 Glycosyltransferase family 10 (fucosyltransferase) C-term HPKB_RS03535 PF18025 Alpha-(1,3)-fucosyltransferase FucT N-terminal domain HPKB_RS03545 PF00206 Lyase HPKB_RS03545 PF10415 Fumarase C C-terminus HPKB_RS03550 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HPKB_RS03560 PF00483 Nucleotidyl transferase HPKB_RS03565 PF01464 Transglycosylase SLT domain HPKB_RS03565 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain HPKB_RS03570 PF02325 YGGT family HPKB_RS03575 PF00749 tRNA synthetases class I (E and Q), catalytic domain HPKB_RS03580 PF00881 Nitroreductase family HPKB_RS03585 PF12627 Probable RNA and SrmB- binding site of polymerase A HPKB_RS03585 PF01743 Poly A polymerase head domain HPKB_RS03585 PF13735 tRNA nucleotidyltransferase domain 2 putative HPKB_RS03590 PF06508 Queuosine biosynthesis protein QueC HPKB_RS03615 PF01750 Hydrogenase maturation protease HPKB_RS03620 PF01292 Prokaryotic cytochrome b561 HPKB_RS03625 PF00374 Nickel-dependent hydrogenase HPKB_RS03630 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HPKB_RS03630 PF10518 TAT (twin-arginine translocation) pathway signal sequence HPKB_RS03630 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal HPKB_RS03635 PF02525 Flavodoxin-like fold HPKB_RS03650 PF14602 Hexapeptide repeat of succinyl-transferase HPKB_RS03650 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle HPKB_RS03655 PF04551 GcpE protein HPKB_RS03660 PF00155 Aminotransferase class I and II HPKB_RS03665 PF08245 Mur ligase middle domain HPKB_RS03665 PF01225 Mur ligase family, catalytic domain HPKB_RS03665 PF02875 Mur ligase family, glutamate ligase domain HPKB_RS03675 PF01713 Smr domain HPKB_RS03675 PF00488 MutS domain V HPKB_RS03680 PF00719 Inorganic pyrophosphatase HPKB_RS03705 PF00152 tRNA synthetases class II (D, K and N) HPKB_RS03705 PF02938 GAD domain HPKB_RS03705 PF01336 OB-fold nucleic acid binding domain HPKB_RS03710 PF01584 CheW-like domain HPKB_RS03710 PF00072 Response regulator receiver domain HPKB_RS03715 PF00533 BRCA1 C Terminus (BRCT) domain HPKB_RS03715 PF01653 NAD-dependent DNA ligase adenylation domain HPKB_RS03715 PF03120 NAD-dependent DNA ligase OB-fold domain HPKB_RS03725 PF00005 ABC transporter HPKB_RS03735 PF00682 HMGL-like HPKB_RS03735 PF08502 LeuA allosteric (dimerisation) domain HPKB_RS03745 PF00873 AcrB/AcrD/AcrF family HPKB_RS03760 PF01208 Uroporphyrinogen decarboxylase (URO-D) HPKB_RS03775 PF00700 Bacterial flagellin C-terminal helical region HPKB_RS03775 PF00669 Bacterial flagellin N-terminal helical region HPKB_RS03775 PF07196 Flagellin hook IN motif HPKB_RS03785 PF12729 Four helix bundle sensory module for signal transduction HPKB_RS03785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPKB_RS03785 PF00672 HAMP domain HPKB_RS03790 PF00155 Aminotransferase class I and II HPKB_RS03795 PF00905 Penicillin binding protein transpeptidase domain HPKB_RS03795 PF00912 Transglycosylase HPKB_RS03825 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HPKB_RS03830 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HPKB_RS03830 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HPKB_RS03830 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HPKB_RS03850 PF04023 FeoA domain HPKB_RS03855 PF00633 Helix-hairpin-helix motif HPKB_RS03855 PF00730 HhH-GPD superfamily base excision DNA repair protein HPKB_RS03860 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HPKB_RS03860 PF04509 CheC-like family HPKB_RS03895 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HPKB_RS03895 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HPKB_RS03900 PF10502 Signal peptidase, peptidase S26 HPKB_RS03905 PF02163 Peptidase family M50 HPKB_RS03910 PF02502 Ribose/Galactose Isomerase HPKB_RS03920 PF00156 Phosphoribosyl transferase domain HPKB_RS03930 PF00883 Cytosol aminopeptidase family, catalytic domain HPKB_RS03930 PF02789 Cytosol aminopeptidase family, N-terminal domain HPKB_RS03935 PF06071 Protein of unknown function (DUF933) HPKB_RS03935 PF01926 50S ribosome-binding GTPase HPKB_RS03945 PF01594 AI-2E family transporter HPKB_RS03950 PF01678 Diaminopimelate epimerase HPKB_RS03955 PF04224 Protein of unknown function, DUF417 HPKB_RS03970 PF01165 Ribosomal protein S21 HPKB_RS03980 PF00550 Phosphopantetheine attachment site HPKB_RS03985 PF00109 Beta-ketoacyl synthase, N-terminal domain HPKB_RS03985 PF02801 Beta-ketoacyl synthase, C-terminal domain HPKB_RS03990 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HPKB_RS04010 PF08032 RNA 2'-O ribose methyltransferase substrate binding HPKB_RS04010 PF00588 SpoU rRNA Methylase family HPKB_RS04015 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HPKB_RS04020 PF01197 Ribosomal protein L31 HPKB_RS04025 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPKB_RS04025 PF07497 Rho termination factor, RNA-binding domain HPKB_RS04025 PF07498 Rho termination factor, N-terminal domain HPKB_RS04030 PF01177 Asp/Glu/Hydantoin racemase HPKB_RS04040 PF03507 CagA exotoxin HPKB_RS04060 PF03135 CagE, TrbE, VirB family, component of type IV transporter system HPKB_RS04120 PF16707 Cag pathogenicity island protein S of Helicobacter pylori HPKB_RS04125 PF13117 Cag pathogenicity island protein Cag12 HPKB_RS04150 PF03743 Bacterial conjugation TrbI-like protein HPKB_RS04160 PF00437 Type II/IV secretion system protein HPKB_RS04165 PF02534 Type IV secretory system Conjugative DNA transfer HPKB_RS04200 PF01926 50S ribosome-binding GTPase HPKB_RS04200 PF07650 KH domain HPKB_RS04205 PF07724 AAA domain (Cdc48 subfamily) HPKB_RS04205 PF10431 C-terminal, D2-small domain, of ClpB protein HPKB_RS04210 PF00227 Proteasome subunit HPKB_RS04215 PF03948 Ribosomal protein L9, C-terminal domain HPKB_RS04215 PF01281 Ribosomal protein L9, N-terminal domain HPKB_RS04225 PF03951 Glutamine synthetase, beta-Grasp domain HPKB_RS04225 PF00120 Glutamine synthetase, catalytic domain HPKB_RS04240 PF05173 Dihydrodipicolinate reductase, C-terminus HPKB_RS04240 PF01113 Dihydrodipicolinate reductase, N-terminus HPKB_RS04245 PF02913 FAD linked oxidases, C-terminal domain HPKB_RS04245 PF01565 FAD binding domain HPKB_RS04250 PF15436 Plasminogen-binding protein pgbA N-terminal HPKB_RS04250 PF15437 Plasminogen-binding protein pgbA C-terminal HPKB_RS04260 PF01464 Transglycosylase SLT domain HPKB_RS04260 PF10145 Phage-related minor tail protein HPKB_RS04260 PF01551 Peptidase family M23 HPKB_RS04275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPKB_RS04275 PF01751 Toprim domain HPKB_RS04275 PF00986 DNA gyrase B subunit, carboxyl terminus HPKB_RS04275 PF00204 DNA gyrase B HPKB_RS04280 PF02768 DNA polymerase III beta subunit, C-terminal domain HPKB_RS04280 PF02767 DNA polymerase III beta subunit, central domain HPKB_RS04280 PF00712 DNA polymerase III beta subunit, N-terminal domain HPKB_RS04285 PF02253 Phospholipase A1 HPKB_RS04290 PF00209 Sodium:neurotransmitter symporter family HPKB_RS04295 PF00209 Sodium:neurotransmitter symporter family HPKB_RS04300 PF03061 Thioesterase superfamily HPKB_RS04305 PF04359 Protein of unknown function (DUF493) HPKB_RS04310 PF02875 Mur ligase family, glutamate ligase domain HPKB_RS04310 PF08245 Mur ligase middle domain HPKB_RS04325 PF00830 Ribosomal L28 family HPKB_RS04355 PF01330 RuvA N terminal domain HPKB_RS04355 PF07499 RuvA, C-terminal domain HPKB_RS04365 PF03023 Lipid II flippase MurJ HPKB_RS04370 PF09190 DALR domain HPKB_RS04370 PF01406 tRNA synthetases class I (C) catalytic domain HPKB_RS04380 PF00005 ABC transporter HPKB_RS04385 PF01032 FecCD transport family HPKB_RS04390 PF00106 short chain dehydrogenase HPKB_RS04395 PF03061 Thioesterase superfamily HPKB_RS04400 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ HPKB_RS04435 PF01924 Hydrogenase formation hypA family HPKB_RS04440 PF01455 HupF/HypC family HPKB_RS04445 PF02492 CobW/HypB/UreG, nucleotide-binding domain HPKB_RS04475 PF13861 FlgD Tudor-like domain HPKB_RS04475 PF13860 FlgD Ig-like domain HPKB_RS04475 PF03963 Flagellar hook capping protein - N-terminal region HPKB_RS04490 PF02384 N-6 DNA Methylase HPKB_RS04490 PF07669 Eco57I restriction-modification methylase HPKB_RS04495 PF13361 UvrD-like helicase C-terminal domain HPKB_RS04495 PF00580 UvrD/REP helicase N-terminal domain HPKB_RS04525 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HPKB_RS04525 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HPKB_RS04525 PF02142 MGS-like domain HPKB_RS04530 PF01027 Inhibitor of apoptosis-promoting Bax1 HPKB_RS04535 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HPKB_RS04535 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HPKB_RS04540 PF03797 Autotransporter beta-domain HPKB_RS04540 PF02691 Vacuolating cyotoxin HPKB_RS04550 PF01361 Tautomerase enzyme HPKB_RS04555 PF02132 RecR protein HPKB_RS04560 PF01142 tRNA pseudouridine synthase D (TruD) HPKB_RS04565 PF01435 Peptidase family M48 HPKB_RS04570 PF01227 GTP cyclohydrolase I HPKB_RS04575 PF00348 Polyprenyl synthetase HPKB_RS04580 PF01975 Survival protein SurE HPKB_RS04590 PF01242 6-pyruvoyl tetrahydropterin synthase HPKB_RS04610 PF00083 Sugar (and other) transporter HPKB_RS04625 PF00528 Binding-protein-dependent transport system inner membrane component HPKB_RS04630 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPKB_RS04635 PF00842 Alanine racemase, C-terminal domain HPKB_RS04635 PF01168 Alanine racemase, N-terminal domain HPKB_RS04640 PF01235 Sodium:alanine symporter family HPKB_RS04645 PF01266 FAD dependent oxidoreductase HPKB_RS04660 PF13146 TRL-like protein family HPKB_RS04680 PF03553 Na+/H+ antiporter family HPKB_RS04695 PF02590 Predicted SPOUT methyltransferase HPKB_RS04700 PF17848 Acetyl-coA carboxylase zinc finger domain HPKB_RS04700 PF01039 Carboxyl transferase domain HPKB_RS04710 PF00994 Probable molybdopterin binding domain HPKB_RS04710 PF02464 Competence-damaged protein HPKB_RS04710 PF18146 Damage-inducible protein CinA KH domain HPKB_RS04720 PF00881 Nitroreductase family HPKB_RS04725 PF01790 Prolipoprotein diacylglyceryl transferase HPKB_RS04735 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HPKB_RS04735 PF02390 Putative methyltransferase HPKB_RS04745 PF01784 NIF3 (NGG1p interacting factor 3) HPKB_RS04750 PF02091 Glycyl-tRNA synthetase alpha subunit HPKB_RS04755 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HPKB_RS04755 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HPKB_RS04775 PF09827 CRISPR associated protein Cas2 HPKB_RS04785 PF00873 AcrB/AcrD/AcrF family HPKB_RS04800 PF02092 Glycyl-tRNA synthetase beta subunit HPKB_RS04810 PF01676 Metalloenzyme superfamily HPKB_RS04810 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HPKB_RS04815 PF02686 Glu-tRNAGln amidotransferase C subunit HPKB_RS04820 PF00202 Aminotransferase class-III HPKB_RS04830 PF02491 SHS2 domain inserted in FTSA HPKB_RS04835 PF00091 Tubulin/FtsZ family, GTPase domain HPKB_RS04835 PF12327 FtsZ family, C-terminal domain HPKB_RS04840 PF00924 Mechanosensitive ion channel HPKB_RS04880 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HPKB_RS04880 PF17810 Arginine decarboxylase helical bundle domain HPKB_RS04880 PF17944 Arginine decarboxylase C-terminal helical extension HPKB_RS04895 PF08003 Protein of unknown function (DUF1698) HPKB_RS04905 PF00133 tRNA synthetases class I (I, L, M and V) HPKB_RS04905 PF09334 tRNA synthetases class I (M) HPKB_RS04905 PF01588 Putative tRNA binding domain HPKB_RS04915 PF00924 Mechanosensitive ion channel HPKB_RS04950 PF00958 GMP synthase C terminal domain HPKB_RS04950 PF02540 NAD synthase HPKB_RS04950 PF00117 Glutamine amidotransferase class-I HPKB_RS04960 PF00384 Molybdopterin oxidoreductase HPKB_RS04960 PF01568 Molydopterin dinucleotide binding domain HPKB_RS04960 PF18364 Molybdopterin oxidoreductase N-terminal domain HPKB_RS04965 PF00384 Molybdopterin oxidoreductase HPKB_RS04965 PF18364 Molybdopterin oxidoreductase N-terminal domain HPKB_RS04965 PF01568 Molydopterin dinucleotide binding domain HPKB_RS04975 PF02347 Glycine cleavage system P-protein HPKB_RS04980 PF01230 HIT domain HPKB_RS04985 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HPKB_RS04985 PF01409 tRNA synthetases class II core domain (F) HPKB_RS04990 PF03484 tRNA synthetase B5 domain HPKB_RS04990 PF03147 Ferredoxin-fold anticodon binding domain HPKB_RS04990 PF01588 Putative tRNA binding domain HPKB_RS04990 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HPKB_RS04995 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HPKB_RS05000 PF02401 LytB protein HPKB_RS05005 PF00575 S1 RNA binding domain HPKB_RS05015 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HPKB_RS05015 PF01842 ACT domain HPKB_RS05015 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPKB_RS05020 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HPKB_RS05025 PF01168 Alanine racemase, N-terminal domain HPKB_RS05035 PF01584 CheW-like domain HPKB_RS05035 PF00072 Response regulator receiver domain HPKB_RS05040 PF02895 Signal transducing histidine kinase, homodimeric domain HPKB_RS05040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPKB_RS05040 PF01627 Hpt domain HPKB_RS05040 PF00072 Response regulator receiver domain HPKB_RS05040 PF01584 CheW-like domain HPKB_RS05045 PF01584 CheW-like domain HPKB_RS05050 PF08534 Redoxin HPKB_RS05060 PF13649 Methyltransferase domain HPKB_RS05065 PF17764 3′ DNA-binding domain (3′BD) HPKB_RS05065 PF00270 DEAD/DEAH box helicase HPKB_RS05065 PF00271 Helicase conserved C-terminal domain HPKB_RS05065 PF18074 Primosomal protein N C-terminal domain HPKB_RS05065 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HPKB_RS05090 PF01435 Peptidase family M48 HPKB_RS05095 PF05175 Methyltransferase small domain HPKB_RS05095 PF17827 PrmC N-terminal domain HPKB_RS05100 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HPKB_RS05100 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HPKB_RS05105 PF00852 Glycosyltransferase family 10 (fucosyltransferase) C-term HPKB_RS05105 PF18025 Alpha-(1,3)-fucosyltransferase FucT N-terminal domain HPKB_RS05110 PF01578 Cytochrome C assembly protein HPKB_RS05110 PF05140 ResB-like family HPKB_RS05120 PF00762 Ferrochelatase HPKB_RS05130 PF04452 RNA methyltransferase HPKB_RS05140 PF00692 dUTPase HPKB_RS05145 PF00364 Biotin-requiring enzyme HPKB_RS05150 PF00289 Biotin carboxylase, N-terminal domain HPKB_RS05150 PF02785 Biotin carboxylase C-terminal domain HPKB_RS05150 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HPKB_RS05170 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HPKB_RS05180 PF00268 Ribonucleotide reductase, small chain HPKB_RS05195 PF01416 tRNA pseudouridine synthase HPKB_RS05200 PF01370 NAD dependent epimerase/dehydratase family HPKB_RS05220 PF00106 short chain dehydrogenase HPKB_RS05225 PF08238 Sel1 repeat HPKB_RS05230 PF01081 KDPG and KHG aldolase HPKB_RS05235 PF00920 Dehydratase family HPKB_RS05240 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain HPKB_RS05240 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain HPKB_RS05245 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HPKB_RS05250 PF02685 Glucokinase HPKB_RS05255 PF08240 Alcohol dehydrogenase GroES-like domain HPKB_RS05255 PF00107 Zinc-binding dehydrogenase HPKB_RS05280 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HPKB_RS05290 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HPKB_RS05290 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HPKB_RS05295 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HPKB_RS05300 PF00206 Lyase HPKB_RS05300 PF10397 Adenylosuccinate lyase C-terminus HPKB_RS05310 PF00271 Helicase conserved C-terminal domain HPKB_RS05310 PF17757 UvrB interaction domain HPKB_RS05310 PF04851 Type III restriction enzyme, res subunit HPKB_RS05310 PF02151 UvrB/uvrC motif HPKB_RS05310 PF12344 Ultra-violet resistance protein B HPKB_RS05335 PF07559 Flagellar basal body protein FlaE HPKB_RS05335 PF00460 Flagella basal body rod protein HPKB_RS05335 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPKB_RS05345 PF00145 C-5 cytosine-specific DNA methylase HPKB_RS05360 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPKB_RS05370 PF00691 OmpA family HPKB_RS05375 PF07676 WD40-like Beta Propeller Repeat HPKB_RS05385 PF02472 Biopolymer transport protein ExbD/TolR HPKB_RS05390 PF01618 MotA/TolQ/ExbB proton channel family HPKB_RS05395 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HPKB_RS05400 PF02874 ATP synthase alpha/beta family, beta-barrel domain HPKB_RS05400 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPKB_RS05405 PF00231 ATP synthase HPKB_RS05410 PF02874 ATP synthase alpha/beta family, beta-barrel domain HPKB_RS05410 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPKB_RS05410 PF00306 ATP synthase alpha/beta chain, C terminal domain HPKB_RS05420 PF00430 ATP synthase B/B' CF(0) HPKB_RS05430 PF02195 ParB-like nuclease domain HPKB_RS05430 PF17762 HTH domain found in ParB protein HPKB_RS05435 PF13614 AAA domain HPKB_RS05440 PF08279 HTH domain HPKB_RS05440 PF02237 Biotin protein ligase C terminal domain HPKB_RS05440 PF03099 Biotin/lipoate A/B protein ligase family HPKB_RS05445 PF02911 Formyl transferase, C-terminal domain HPKB_RS05445 PF00551 Formyl transferase HPKB_RS05480 PF01245 Ribosomal protein L19 HPKB_RS05485 PF01746 tRNA (Guanine-1)-methyltransferase HPKB_RS05490 PF01782 RimM N-terminal domain HPKB_RS05490 PF05239 PRC-barrel domain HPKB_RS05500 PF00886 Ribosomal protein S16 HPKB_RS05505 PF02978 Signal peptide binding domain HPKB_RS05505 PF02881 SRP54-type protein, helical bundle domain HPKB_RS05505 PF00448 SRP54-type protein, GTPase domain HPKB_RS05510 PF08264 Anticodon-binding domain of tRNA HPKB_RS05510 PF00133 tRNA synthetases class I (I, L, M and V) HPKB_RS05510 PF10458 Valyl tRNA synthetase tRNA binding arm HPKB_RS05515 PF02623 FliW protein HPKB_RS05520 PF04101 Glycosyltransferase family 28 C-terminal domain HPKB_RS05520 PF03033 Glycosyltransferase family 28 N-terminal domain HPKB_RS05535 PF14748 Pyrroline-5-carboxylate reductase dimerisation HPKB_RS05535 PF03807 NADP oxidoreductase coenzyme F420-dependent HPKB_RS05540 PF02661 Fic/DOC family HPKB_RS05545 PF02130 Uncharacterized protein family UPF0054 HPKB_RS05550 PF00258 Flavodoxin HPKB_RS05565 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPKB_RS05575 PF00342 Phosphoglucose isomerase HPKB_RS05590 PF00528 Binding-protein-dependent transport system inner membrane component HPKB_RS05595 PF00528 Binding-protein-dependent transport system inner membrane component HPKB_RS05600 PF00005 ABC transporter HPKB_RS05615 PF07690 Major Facilitator Superfamily HPKB_RS05620 PF00860 Permease family HPKB_RS05630 PF01048 Phosphorylase superfamily HPKB_RS05640 PF01773 Na+ dependent nucleoside transporter N-terminus HPKB_RS05640 PF07662 Na+ dependent nucleoside transporter C-terminus HPKB_RS05650 PF07690 Major Facilitator Superfamily HPKB_RS05655 PF01171 PP-loop family HPKB_RS05660 PF02080 TrkA-C domain HPKB_RS05660 PF02254 TrkA-N domain HPKB_RS05660 PF00999 Sodium/hydrogen exchanger family HPKB_RS05670 PF07690 Major Facilitator Superfamily HPKB_RS05675 PF00194 Eukaryotic-type carbonic anhydrase HPKB_RS05685 PF01118 Semialdehyde dehydrogenase, NAD binding domain HPKB_RS05685 PF02774 Semialdehyde dehydrogenase, dimerisation domain HPKB_RS05695 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HPKB_RS05705 PF00679 Elongation factor G C-terminus HPKB_RS05705 PF14492 Elongation Factor G, domain II HPKB_RS05705 PF00009 Elongation factor Tu GTP binding domain HPKB_RS05705 PF03144 Elongation factor Tu domain 2 HPKB_RS05705 PF03764 Elongation factor G, domain IV HPKB_RS05710 PF00177 Ribosomal protein S7p/S5e HPKB_RS05715 PF00164 Ribosomal protein S12/S23 HPKB_RS05720 PF04998 RNA polymerase Rpb1, domain 5 HPKB_RS05720 PF05000 RNA polymerase Rpb1, domain 4 HPKB_RS05720 PF04997 RNA polymerase Rpb1, domain 1 HPKB_RS05720 PF00623 RNA polymerase Rpb1, domain 2 HPKB_RS05720 PF04563 RNA polymerase beta subunit HPKB_RS05720 PF10385 RNA polymerase beta subunit external 1 domain HPKB_RS05720 PF04983 RNA polymerase Rpb1, domain 3 HPKB_RS05720 PF04561 RNA polymerase Rpb2, domain 2 HPKB_RS05720 PF00562 RNA polymerase Rpb2, domain 6 HPKB_RS05720 PF04565 RNA polymerase Rpb2, domain 3 HPKB_RS05720 PF04560 RNA polymerase Rpb2, domain 7 HPKB_RS05725 PF00542 Ribosomal protein L7/L12 C-terminal domain HPKB_RS05725 PF16320 Ribosomal protein L7/L12 dimerisation domain HPKB_RS05730 PF00466 Ribosomal protein L10 HPKB_RS05740 PF00298 Ribosomal protein L11, RNA binding domain HPKB_RS05740 PF03946 Ribosomal protein L11, N-terminal domain HPKB_RS05745 PF02357 Transcription termination factor nusG HPKB_RS05760 PF00471 Ribosomal protein L33 HPKB_RS05765 PF03143 Elongation factor Tu C-terminal domain HPKB_RS05765 PF03144 Elongation factor Tu domain 2 HPKB_RS05765 PF00009 Elongation factor Tu GTP binding domain HPKB_RS05790 PF00005 ABC transporter HPKB_RS05790 PF00664 ABC transporter transmembrane region HPKB_RS05800 PF02086 D12 class N6 adenine-specific DNA methyltransferase HPKB_RS05810 PF00132 Bacterial transferase hexapeptide (six repeats) HPKB_RS05825 PF00137 ATP synthase subunit C HPKB_RS05830 PF00575 S1 RNA binding domain HPKB_RS05830 PF00013 KH domain HPKB_RS05830 PF03725 3' exoribonuclease family, domain 2 HPKB_RS05830 PF01138 3' exoribonuclease family, domain 1 HPKB_RS05840 PF04453 LPS transport system D HPKB_RS05840 PF03968 OstA-like protein HPKB_RS05850 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HPKB_RS05850 PF02844 Phosphoribosylglycinamide synthetase, N domain HPKB_RS05850 PF02843 Phosphoribosylglycinamide synthetase, C domain HPKB_RS05860 PF00005 ABC transporter HPKB_RS05865 PF01255 Putative undecaprenyl diphosphate synthase HPKB_RS05885 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HPKB_RS05890 PF04055 Radical SAM superfamily HPKB_RS05895 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HPKB_RS05900 PF00293 NUDIX domain HPKB_RS05905 PF13840 ACT domain HPKB_RS05905 PF01842 ACT domain HPKB_RS05905 PF00696 Amino acid kinase family HPKB_RS05915 PF12169 DNA polymerase III subunits gamma and tau domain III HPKB_RS05920 PF00809 Pterin binding enzyme HPKB_RS05930 PF00892 EamA-like transporter family HPKB_RS05945 PF00117 Glutamine amidotransferase class-I HPKB_RS05945 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HPKB_RS05950 PF00795 Carbon-nitrogen hydrolase HPKB_RS05960 PF02545 Maf-like protein HPKB_RS05965 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HPKB_RS05965 PF01411 tRNA synthetases class II (A) HPKB_RS05965 PF02272 DHHA1 domain HPKB_RS05980 PF01084 Ribosomal protein S18 HPKB_RS05985 PF00436 Single-strand binding protein family HPKB_RS05990 PF01250 Ribosomal protein S6 HPKB_RS05995 PF06144 DNA polymerase III, delta subunit HPKB_RS06000 PF00773 RNB domain HPKB_RS06005 PF08501 Shikimate dehydrogenase substrate binding domain HPKB_RS06015 PF00528 Binding-protein-dependent transport system inner membrane component HPKB_RS06020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPKB_RS06025 PF00579 tRNA synthetases class I (W and Y) HPKB_RS06035 PF03840 Preprotein translocase SecG subunit HPKB_RS06040 PF01765 Ribosome recycling factor HPKB_RS06045 PF00156 Phosphoribosyl transferase domain HPKB_RS06060 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HPKB_RS06065 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HPKB_RS06070 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HPKB_RS06075 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HPKB_RS06090 PF00384 Molybdopterin oxidoreductase HPKB_RS06090 PF12838 4Fe-4S dicluster domain HPKB_RS06090 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HPKB_RS06090 PF01568 Molydopterin dinucleotide binding domain HPKB_RS06090 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HPKB_RS06095 PF00146 NADH dehydrogenase HPKB_RS06100 PF12838 4Fe-4S dicluster domain HPKB_RS06105 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HPKB_RS06110 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HPKB_RS06115 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HPKB_RS06115 PF00361 Proton-conducting membrane transporter HPKB_RS06120 PF00361 Proton-conducting membrane transporter HPKB_RS06120 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus HPKB_RS06125 PF00361 Proton-conducting membrane transporter HPKB_RS06135 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HPKB_RS06135 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HPKB_RS06135 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HPKB_RS06135 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HPKB_RS06145 PF00290 Tryptophan synthase alpha chain HPKB_RS06150 PF00291 Pyridoxal-phosphate dependent enzyme HPKB_RS06155 PF00218 Indole-3-glycerol phosphate synthase HPKB_RS06155 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HPKB_RS06160 PF02885 Glycosyl transferase family, helical bundle domain HPKB_RS06160 PF00591 Glycosyl transferase family, a/b domain HPKB_RS06165 PF00117 Glutamine amidotransferase class-I HPKB_RS06170 PF04715 Anthranilate synthase component I, N terminal region HPKB_RS06170 PF00425 chorismate binding enzyme HPKB_RS06175 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HPKB_RS06185 PF04264 YceI-like domain HPKB_RS06190 PF03070 TENA/THI-4/PQQC family HPKB_RS06195 PF04973 Nicotinamide mononucleotide transporter HPKB_RS06205 PF01196 Ribosomal protein L17 HPKB_RS06210 PF01000 RNA polymerase Rpb3/RpoA insert domain HPKB_RS06210 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HPKB_RS06210 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HPKB_RS06215 PF01479 S4 domain HPKB_RS06215 PF00163 Ribosomal protein S4/S9 N-terminal domain HPKB_RS06220 PF00411 Ribosomal protein S11 HPKB_RS06225 PF00416 Ribosomal protein S13/S18 HPKB_RS06230 PF00444 Ribosomal protein L36 HPKB_RS06235 PF01176 Translation initiation factor 1A / IF-1 HPKB_RS06240 PF00557 Metallopeptidase family M24 HPKB_RS06250 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HPKB_RS06255 PF03719 Ribosomal protein S5, C-terminal domain HPKB_RS06255 PF00333 Ribosomal protein S5, N-terminal domain HPKB_RS06260 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HPKB_RS06265 PF00347 Ribosomal protein L6 HPKB_RS06270 PF00410 Ribosomal protein S8 HPKB_RS06275 PF00253 Ribosomal protein S14p/S29e HPKB_RS06280 PF00673 ribosomal L5P family C-terminus HPKB_RS06280 PF00281 Ribosomal protein L5 HPKB_RS06285 PF00467 KOW motif HPKB_RS06285 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HPKB_RS06290 PF00238 Ribosomal protein L14p/L23e HPKB_RS06295 PF00366 Ribosomal protein S17 HPKB_RS06300 PF00831 Ribosomal L29 protein HPKB_RS06305 PF00252 Ribosomal protein L16p/L10e HPKB_RS06310 PF00189 Ribosomal protein S3, C-terminal domain HPKB_RS06310 PF07650 KH domain HPKB_RS06315 PF00237 Ribosomal protein L22p/L17e HPKB_RS06320 PF00203 Ribosomal protein S19 HPKB_RS06325 PF00181 Ribosomal Proteins L2, RNA binding domain HPKB_RS06325 PF03947 Ribosomal Proteins L2, C-terminal domain HPKB_RS06330 PF00276 Ribosomal protein L23 HPKB_RS06335 PF00573 Ribosomal protein L4/L1 family HPKB_RS06340 PF00297 Ribosomal protein L3 HPKB_RS06345 PF00338 Ribosomal protein S10p/S20e HPKB_RS06360 PF01351 Ribonuclease HII HPKB_RS06370 PF00206 Lyase HPKB_RS06370 PF10415 Fumarase C C-terminus HPKB_RS06390 PF00873 AcrB/AcrD/AcrF family HPKB_RS06395 PF05437 Branched-chain amino acid transport protein (AzlD) HPKB_RS06400 PF03591 AzlC protein HPKB_RS06405 PF00684 DnaJ central domain HPKB_RS06405 PF01556 DnaJ C terminal domain HPKB_RS06405 PF00226 DnaJ domain HPKB_RS06425 PF01467 Cytidylyltransferase-like HPKB_RS06430 PF08753 NikR C terminal nickel binding domain HPKB_RS06430 PF01402 Ribbon-helix-helix protein, copG family HPKB_RS06435 PF01618 MotA/TolQ/ExbB proton channel family HPKB_RS06440 PF02472 Biopolymer transport protein ExbD/TolR HPKB_RS06445 PF03544 Gram-negative bacterial TonB protein C-terminal HPKB_RS06450 PF01555 DNA methylase HPKB_RS06455 PF04371 Porphyromonas-type peptidyl-arginine deiminase HPKB_RS06460 PF17788 HypF Kae1-like domain HPKB_RS06460 PF01300 Telomere recombination HPKB_RS06460 PF07503 HypF finger HPKB_RS06460 PF00708 Acylphosphatase HPKB_RS06465 PF02769 AIR synthase related protein, C-terminal domain HPKB_RS06465 PF00586 AIR synthase related protein, N-terminal domain HPKB_RS06475 PF01370 NAD dependent epimerase/dehydratase family HPKB_RS06480 PF16363 GDP-mannose 4,6 dehydratase HPKB_RS06485 PF01050 Mannose-6-phosphate isomerase HPKB_RS06485 PF00483 Nucleotidyl transferase HPKB_RS06520 PF02575 YbaB/EbfC DNA-binding family HPKB_RS06525 PF02261 Aspartate decarboxylase HPKB_RS06530 PF00004 ATPase family associated with various cellular activities (AAA) HPKB_RS06530 PF07724 AAA domain (Cdc48 subfamily) HPKB_RS06530 PF17871 AAA lid domain HPKB_RS06530 PF10431 C-terminal, D2-small domain, of ClpB protein HPKB_RS06530 PF02861 Clp amino terminal domain, pathogenicity island component HPKB_RS06535 PF02617 ATP-dependent Clp protease adaptor protein ClpS HPKB_RS06540 PF00582 Universal stress protein family HPKB_RS06555 PF07509 Protein of unknown function (DUF1523) HPKB_RS06560 PF00180 Isocitrate/isopropylmalate dehydrogenase HPKB_RS06565 PF00285 Citrate synthase, C-terminal domain HPKB_RS06585 PF04055 Radical SAM superfamily HPKB_RS06585 PF06968 Biotin and Thiamin Synthesis associated domain HPKB_RS06590 PF03631 Virulence factor BrkB HPKB_RS06630 PF14489 QueF-like protein HPKB_RS06660 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HPKB_RS06665 PF01313 Bacterial export proteins, family 3 HPKB_RS06670 PF18269 T3SS EscN ATPase C-terminal domain HPKB_RS06670 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPKB_RS06675 PF00437 Type II/IV secretion system protein HPKB_RS06680 PF00133 tRNA synthetases class I (I, L, M and V) HPKB_RS06680 PF08264 Anticodon-binding domain of tRNA HPKB_RS06685 PF01479 S4 domain HPKB_RS06700 PF04055 Radical SAM superfamily HPKB_RS06705 PF01380 SIS domain HPKB_RS06705 PF00571 CBS domain HPKB_RS06710 PF17770 Ribonuclease J C-terminal domain HPKB_RS06710 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HPKB_RS06710 PF00753 Metallo-beta-lactamase superfamily HPKB_RS06715 PF00398 Ribosomal RNA adenine dimethylase HPKB_RS06735 PF00551 Formyl transferase HPKB_RS06735 PF01842 ACT domain HPKB_RS06785 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HPKB_RS06790 PF02599 Global regulator protein family HPKB_RS06795 PF00288 GHMP kinases N terminal domain HPKB_RS06800 PF01668 SmpB protein HPKB_RS06805 PF01618 MotA/TolQ/ExbB proton channel family HPKB_RS06810 PF02472 Biopolymer transport protein ExbD/TolR HPKB_RS06815 PF00468 Ribosomal protein L34 HPKB_RS06820 PF00825 Ribonuclease P HPKB_RS06825 PF01809 Putative membrane protein insertion efficiency factor HPKB_RS06830 PF14849 YidC periplasmic domain HPKB_RS06830 PF02096 60Kd inner membrane protein HPKB_RS06840 PF01926 50S ribosome-binding GTPase HPKB_RS06840 PF10396 GTP-binding protein TrmE N-terminus HPKB_RS06840 PF12631 MnmE helical domain HPKB_RS06860 PF02169 LPP20 lipoprotein HPKB_RS06870 PF00085 Thioredoxin HPKB_RS06875 PF00849 RNA pseudouridylate synthase HPKB_RS06875 PF01479 S4 domain HPKB_RS06885 PF03150 Di-haem cytochrome c peroxidase HPKB_RS06885 PF00034 Cytochrome c HPKB_RS06905 PF09383 NIL domain HPKB_RS06905 PF00005 ABC transporter HPKB_RS06910 PF02405 Permease MlaE HPKB_RS06920 PF01063 Amino-transferase class IV HPKB_RS06930 PF00476 DNA polymerase family A HPKB_RS06930 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HPKB_RS06930 PF01367 5'-3' exonuclease, C-terminal SAM fold HPKB_RS06940 PF00145 C-5 cytosine-specific DNA methylase HPKB_RS06940 PF01381 Helix-turn-helix HPKB_RS06960 PF02223 Thymidylate kinase HPKB_RS06965 PF01467 Cytidylyltransferase-like HPKB_RS06970 PF02441 Flavoprotein HPKB_RS06980 PF00580 UvrD/REP helicase N-terminal domain HPKB_RS06980 PF13361 UvrD-like helicase C-terminal domain HPKB_RS06990 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HPKB_RS06990 PF02403 Seryl-tRNA synthetase N-terminal domain HPKB_RS07000 PF02609 Exonuclease VII small subunit HPKB_RS07005 PF01209 ubiE/COQ5 methyltransferase family HPKB_RS07010 PF03653 Uncharacterised protein family (UPF0093) HPKB_RS07015 PF09186 Domain of unknown function (DUF1949) HPKB_RS07015 PF01205 Uncharacterized protein family UPF0029 HPKB_RS07030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPKB_RS07040 PF03471 Transporter associated domain HPKB_RS07040 PF00571 CBS domain HPKB_RS07040 PF01595 Cyclin M transmembrane N-terminal domain HPKB_RS07045 PF01384 Phosphate transporter family HPKB_RS07050 PF01106 NifU-like domain HPKB_RS07060 PF08245 Mur ligase middle domain HPKB_RS07060 PF02875 Mur ligase family, glutamate ligase domain HPKB_RS07065 PF00923 Transaldolase/Fructose-6-phosphate aldolase HPKB_RS07070 PF01386 Ribosomal L25p family HPKB_RS07070 PF14693 Ribosomal protein TL5, C-terminal domain HPKB_RS07075 PF01195 Peptidyl-tRNA hydrolase HPKB_RS07110 PF05175 Methyltransferase small domain HPKB_RS07115 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HPKB_RS07115 PF01872 RibD C-terminal domain HPKB_RS07120 PF03616 Sodium/glutamate symporter HPKB_RS07125 PF16653 Saccharopine dehydrogenase C-terminal domain HPKB_RS07125 PF03435 Saccharopine dehydrogenase NADP binding domain HPKB_RS07130 PF13746 4Fe-4S dicluster domain HPKB_RS07130 PF12801 4Fe-4S binding domain HPKB_RS07130 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase HPKB_RS07135 PF02660 Glycerol-3-phosphate acyltransferase HPKB_RS07155 PF03841 L-seryl-tRNA selenium transferase HPKB_RS07160 PF13184 NusA-like KH domain HPKB_RS07160 PF08529 NusA N-terminal domain HPKB_RS07185 PF18273 Type III R-M EcoP15I C-terminal domain HPKB_RS07185 PF01555 DNA methylase HPKB_RS07190 PF00271 Helicase conserved C-terminal domain HPKB_RS07190 PF04851 Type III restriction enzyme, res subunit HPKB_RS07205 PF03372 Endonuclease/Exonuclease/phosphatase family HPKB_RS07225 PF00308 Bacterial dnaA protein HPKB_RS07225 PF08299 Bacterial dnaA protein helix-turn-helix HPKB_RS07235 PF10398 Protein of unknown function (DUF2443) HPKB_RS07240 PF01380 SIS domain HPKB_RS07245 PF02511 Thymidylate synthase complementing protein HPKB_RS07250 PF01420 Type I restriction modification DNA specificity domain HPKB_RS07265 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HPKB_RS07265 PF18766 SWI2/SNF2 ATPase HPKB_RS07265 PF11867 Domain of unknown function (DUF3387) HPKB_RS07280 PF00491 Arginase family HPKB_RS07285 PF00324 Amino acid permease HPKB_RS07290 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HPKB_RS07290 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HPKB_RS07305 PF01513 ATP-NAD kinase HPKB_RS07310 PF02463 RecF/RecN/SMC N terminal domain HPKB_RS07315 PF05670 NFACT protein RNA binding domain HPKB_RS07340 PF14579 Helix-hairpin-helix motif HPKB_RS07340 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HPKB_RS07340 PF07733 Bacterial DNA polymerase III alpha NTPase domain HPKB_RS07340 PF02811 PHP domain HPKB_RS07340 PF11490 DNA polymerase III polC-type N-terminus II HPKB_RS07340 PF14480 DNA polymerase III polC-type N-terminus I HPKB_RS07340 PF00929 Exonuclease HPKB_RS07345 PF00834 Ribulose-phosphate 3 epimerase family HPKB_RS07350 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HPKB_RS07375 PF00889 Elongation factor TS HPKB_RS07380 PF00318 Ribosomal protein S2 HPKB_RS07385 PF12705 PD-(D/E)XK nuclease superfamily HPKB_RS07385 PF00580 UvrD/REP helicase N-terminal domain HPKB_RS07385 PF13361 UvrD-like helicase C-terminal domain HPKB_RS07390 PF06965 Na+/H+ antiporter 1 HPKB_RS07395 PF02699 Preprotein translocase subunit HPKB_RS07400 PF02355 Protein export membrane protein HPKB_RS07405 PF02355 Protein export membrane protein HPKB_RS07405 PF07549 SecD/SecF GG Motif HPKB_RS07415 PF09334 tRNA synthetases class I (M) HPKB_RS07415 PF00133 tRNA synthetases class I (I, L, M and V) HPKB_RS07415 PF13603 Leucyl-tRNA synthetase, Domain 2 HPKB_RS07425 PF02875 Mur ligase family, glutamate ligase domain HPKB_RS07425 PF08245 Mur ligase middle domain HPKB_RS07435 PF04225 Opacity-associated protein A LysM-like domain HPKB_RS07435 PF01551 Peptidase family M23 HPKB_RS07445 PF17757 UvrB interaction domain HPKB_RS07445 PF00270 DEAD/DEAH box helicase HPKB_RS07445 PF03461 TRCF domain HPKB_RS07445 PF00271 Helicase conserved C-terminal domain HPKB_RS07445 PF02559 CarD-like/TRCF domain HPKB_RS07450 PF00355 Rieske [2Fe-2S] domain HPKB_RS07450 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal HPKB_RS07455 PF00033 Cytochrome b/b6/petB HPKB_RS07455 PF00032 Cytochrome b(C-terminal)/b6/petD HPKB_RS07475 PF03717 Penicillin-binding Protein dimerisation domain HPKB_RS07475 PF00905 Penicillin binding protein transpeptidase domain HPKB_RS07480 PF02049 Flagellar hook-basal body complex protein FliE HPKB_RS07485 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPKB_RS07485 PF00460 Flagella basal body rod protein HPKB_RS07490 PF00460 Flagella basal body rod protein HPKB_RS07495 PF01098 Cell cycle protein HPKB_RS07510 PF10417 C-terminal domain of 1-Cys peroxiredoxin HPKB_RS07510 PF00578 AhpC/TSA family HPKB_RS07515 PF03180 NLPA lipoprotein HPKB_RS07520 PF03717 Penicillin-binding Protein dimerisation domain HPKB_RS07520 PF00905 Penicillin binding protein transpeptidase domain HPKB_RS07530 PF01926 50S ribosome-binding GTPase HPKB_RS07550 PF05036 Sporulation related domain HPKB_RS07550 PF03330 Lytic transglycolase HPKB_RS07555 PF01464 Transglycosylase SLT domain HPKB_RS07555 PF01476 LysM domain HPKB_RS07560 PF01026 TatD related DNase HPKB_RS07565 PF00677 Lumazine binding domain HPKB_RS07575 PF00005 ABC transporter HPKB_RS07575 PF09383 NIL domain HPKB_RS07580 PF00528 Binding-protein-dependent transport system inner membrane component HPKB_RS07590 PF01569 PAP2 superfamily HPKB_RS07595 PF00953 Glycosyl transferase family 4 HPKB_RS07600 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HPKB_RS07605 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HPKB_RS07610 PF00814 Glycoprotease family HPKB_RS07615 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPKB_RS07615 PF00460 Flagella basal body rod protein HPKB_RS07625 PF13099 Domain of unknown function (DUF3944) HPKB_RS07625 PF03981 Ubiquinol-cytochrome C chaperone HPKB_RS07655 PF01515 Phosphate acetyl/butaryl transferase