locus-tag	class	description
HPAKL117_RS00005	PF01029	NusB family
HPAKL117_RS00010	PF00885	6,7-dimethyl-8-ribityllumazine synthase
HPAKL117_RS00015	PF00793	DAHP synthetase I family
HPAKL117_RS00020	PF00484	Carbonic anhydrase
HPAKL117_RS00025	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
HPAKL117_RS00030	PF02569	Pantoate-beta-alanine ligase
HPAKL117_RS00065	PF00118	TCP-1/cpn60 chaperonin family
HPAKL117_RS00070	PF00166	Chaperonin 10 Kd subunit
HPAKL117_RS00075	PF13662	Toprim domain
HPAKL117_RS00075	PF08275	DNA primase catalytic core, N-terminal domain
HPAKL117_RS00075	PF01807	CHC2 zinc finger
HPAKL117_RS00075	PF16730	DnaG-primase C-terminal, helicase-binding domain
HPAKL117_RS00110	PF01584	CheW-like domain
HPAKL117_RS00110	PF00072	Response regulator receiver domain
HPAKL117_RS00115	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
HPAKL117_RS00120	PF01569	PAP2 superfamily
HPAKL117_RS00125	PF00884	Sulfatase
HPAKL117_RS00125	PF08019	Phosphoethanolamine transferase EptA/EptB
HPAKL117_RS00135	PF00285	Citrate synthase, C-terminal domain
HPAKL117_RS00140	PF00180	Isocitrate/isopropylmalate dehydrogenase
HPAKL117_RS00145	PF07509	Protein of unknown function (DUF1523)
HPAKL117_RS00160	PF00582	Universal stress protein family
HPAKL117_RS00165	PF02617	ATP-dependent Clp protease adaptor protein ClpS
HPAKL117_RS00170	PF07724	AAA domain (Cdc48 subfamily)
HPAKL117_RS00170	PF10431	C-terminal, D2-small domain, of ClpB protein 
HPAKL117_RS00170	PF02861	Clp amino terminal domain, pathogenicity island component
HPAKL117_RS00170	PF17871	AAA lid domain
HPAKL117_RS00170	PF00004	ATPase family associated with various cellular activities (AAA)
HPAKL117_RS00175	PF02261	Aspartate decarboxylase
HPAKL117_RS00180	PF02575	YbaB/EbfC DNA-binding family
HPAKL117_RS00215	PF00483	Nucleotidyl transferase
HPAKL117_RS00215	PF01050	Mannose-6-phosphate isomerase
HPAKL117_RS00220	PF16363	GDP-mannose 4,6 dehydratase
HPAKL117_RS00225	PF01370	NAD dependent epimerase/dehydratase family
HPAKL117_RS00230	PF00586	AIR synthase related protein, N-terminal domain
HPAKL117_RS00230	PF02769	AIR synthase related protein, C-terminal domain
HPAKL117_RS00235	PF17788	HypF Kae1-like domain
HPAKL117_RS00235	PF01300	Telomere recombination
HPAKL117_RS00235	PF00708	Acylphosphatase
HPAKL117_RS00235	PF07503	HypF finger
HPAKL117_RS00240	PF04371	Porphyromonas-type peptidyl-arginine deiminase
HPAKL117_RS00245	PF01555	DNA methylase
HPAKL117_RS00250	PF00145	C-5 cytosine-specific DNA methylase
HPAKL117_RS00250	PF01381	Helix-turn-helix
HPAKL117_RS00260	PF01555	DNA methylase
HPAKL117_RS00275	PF00474	Sodium:solute symporter family
HPAKL117_RS00280	PF14850	DNA-binding domain of Proline dehydrogenase
HPAKL117_RS00280	PF00171	Aldehyde dehydrogenase family
HPAKL117_RS00280	PF01619	Proline dehydrogenase
HPAKL117_RS00280	PF18327	Proline utilization A proline dehydrogenase N-terminal domain 
HPAKL117_RS00350	PF01580	FtsK/SpoIIIE family
HPAKL117_RS00355	PF01774	UreD urease accessory protein
HPAKL117_RS00360	PF02492	CobW/HypB/UreG, nucleotide-binding domain
HPAKL117_RS00365	PF01730	UreF
HPAKL117_RS00370	PF02814	UreE urease accessory protein, N-terminal domain
HPAKL117_RS00370	PF05194	UreE urease accessory protein, C-terminal domain
HPAKL117_RS00375	PF02293	AmiS/UreI family transporter
HPAKL117_RS00380	PF01979	Amidohydrolase family
HPAKL117_RS00380	PF00449	Urease alpha-subunit, N-terminal domain
HPAKL117_RS00385	PF00547	Urease, gamma subunit
HPAKL117_RS00385	PF00699	Urease beta subunit
HPAKL117_RS00395	PF01252	Signal peptidase (SPase) II
HPAKL117_RS00400	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
HPAKL117_RS00400	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
HPAKL117_RS00400	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
HPAKL117_RS00400	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
HPAKL117_RS00405	PF01649	Ribosomal protein S20
HPAKL117_RS00410	PF00472	RF-1 domain
HPAKL117_RS00410	PF03462	PCRF domain
HPAKL117_RS00430	PF00672	HAMP domain
HPAKL117_RS00430	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
HPAKL117_RS00430	PF17200	Single Cache domain 2
HPAKL117_RS00435	PF00380	Ribosomal protein S9/S16
HPAKL117_RS00440	PF00572	Ribosomal protein L13
HPAKL117_RS00445	PF17402	Family of unknown function (DUF5408)
HPAKL117_RS00450	PF06039	Malate:quinone oxidoreductase (Mqo)
HPAKL117_RS00460	PF04545	Sigma-70, region 4
HPAKL117_RS00460	PF04542	Sigma-70 region 2 
HPAKL117_RS00460	PF04539	Sigma-70 region 3
HPAKL117_RS00460	PF00140	Sigma-70 factor, region 1.2
HPAKL117_RS00465	PF01048	Phosphorylase superfamily
HPAKL117_RS00470	PF00698	Acyl transferase domain
HPAKL117_RS00485	PF01555	DNA methylase
HPAKL117_RS00490	PF01531	Glycosyl transferase family 11
HPAKL117_RS00505	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
HPAKL117_RS00505	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
HPAKL117_RS00515	PF00291	Pyridoxal-phosphate dependent enzyme
HPAKL117_RS00520	PF16591	Helical bimodular sensor domain
HPAKL117_RS00520	PF00672	HAMP domain
HPAKL117_RS00520	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
HPAKL117_RS00525	PF02677	Epoxyqueuosine reductase QueH
HPAKL117_RS00535	PF00535	Glycosyl transferase family 2
HPAKL117_RS00540	PF00672	HAMP domain
HPAKL117_RS00540	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
HPAKL117_RS00540	PF17200	Single Cache domain 2
HPAKL117_RS00545	PF02872	5'-nucleotidase, C-terminal domain
HPAKL117_RS00545	PF00149	Calcineurin-like phosphoesterase
HPAKL117_RS00550	PF02664	S-Ribosylhomocysteinase (LuxS)
HPAKL117_RS00555	PF01053	Cys/Met metabolism PLP-dependent enzyme
HPAKL117_RS00560	PF00291	Pyridoxal-phosphate dependent enzyme
HPAKL117_RS00570	PF00012	Hsp70 protein
HPAKL117_RS00575	PF01025	GrpE
HPAKL117_RS00600	PF00669	Bacterial flagellin N-terminal helical region
HPAKL117_RS00600	PF07196	Flagellin hook IN motif
HPAKL117_RS00600	PF00700	Bacterial flagellin C-terminal helical region
HPAKL117_RS00605	PF01131	DNA topoisomerase
HPAKL117_RS00605	PF01396	Topoisomerase DNA binding C4 zinc finger
HPAKL117_RS00605	PF01751	Toprim domain
HPAKL117_RS00610	PF04055	Radical SAM superfamily
HPAKL117_RS00620	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
HPAKL117_RS00620	PF02896	PEP-utilising enzyme, TIM barrel domain
HPAKL117_RS00620	PF00391	PEP-utilising enzyme, mobile domain
HPAKL117_RS00630	PF03129	Anticodon binding domain
HPAKL117_RS00630	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
HPAKL117_RS00630	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
HPAKL117_RS00635	PF05198	Translation initiation factor IF-3, N-terminal domain
HPAKL117_RS00635	PF00707	Translation initiation factor IF-3, C-terminal domain
HPAKL117_RS00640	PF01632	Ribosomal protein L35
HPAKL117_RS00645	PF00453	Ribosomal protein L20
HPAKL117_RS00670	PF03315	Serine dehydratase beta chain
HPAKL117_RS00670	PF03313	Serine dehydratase alpha chain
HPAKL117_RS00675	PF03222	Tryptophan/tyrosine permease family
HPAKL117_RS00680	PF01474	Class-II DAHP synthetase family
HPAKL117_RS00690	PF00578	AhpC/TSA family
HPAKL117_RS00695	PF02589	LUD domain
HPAKL117_RS00700	PF11870	Domain of unknown function (DUF3390)
HPAKL117_RS00700	PF13183	4Fe-4S dicluster domain
HPAKL117_RS00700	PF02589	LUD domain
HPAKL117_RS00705	PF02754	Cysteine-rich domain
HPAKL117_RS00710	PF02652	L-lactate permease
HPAKL117_RS00715	PF02652	L-lactate permease
HPAKL117_RS00720	PF00730	HhH-GPD superfamily base excision DNA repair protein
HPAKL117_RS00720	PF00633	Helix-hairpin-helix motif
HPAKL117_RS00720	PF14815	NUDIX domain
HPAKL117_RS00725	PF00939	Sodium:sulfate symporter transmembrane region
HPAKL117_RS00730	PF00115	Cytochrome C and Quinol oxidase polypeptide I
HPAKL117_RS00745	PF14715	N-terminal domain of cytochrome oxidase-cbb3, FixP 
HPAKL117_RS00745	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
HPAKL117_RS00775	PF00154	recA bacterial DNA recombination protein
HPAKL117_RS00780	PF00113	Enolase, C-terminal TIM barrel domain
HPAKL117_RS00780	PF03952	Enolase, N-terminal domain
HPAKL117_RS00795	PF01202	Shikimate kinase
HPAKL117_RS00810	PF08238	Sel1 repeat
HPAKL117_RS00815	PF01709	Transcriptional regulator
HPAKL117_RS00820	PF00490	Delta-aminolevulinic acid dehydratase
HPAKL117_RS00830	PF00486	Transcriptional regulatory protein, C terminal
HPAKL117_RS00830	PF00072	Response regulator receiver domain
HPAKL117_RS00845	PF01136	Peptidase family U32
HPAKL117_RS00855	PF00472	RF-1 domain
HPAKL117_RS00855	PF03462	PCRF domain
HPAKL117_RS00860	PF03453	MoeA N-terminal region (domain I and II)
HPAKL117_RS00860	PF00994	Probable molybdopterin binding domain
HPAKL117_RS00860	PF03454	MoeA C-terminal region (domain IV)
HPAKL117_RS00880	PF00639	PPIC-type PPIASE domain
HPAKL117_RS00885	PF01116	Fructose-bisphosphate aldolase class-II
HPAKL117_RS00890	PF01132	Elongation factor P (EF-P) OB domain
HPAKL117_RS00890	PF08207	Elongation factor P (EF-P) KOW-like domain
HPAKL117_RS00890	PF09285	Elongation factor P, C-terminal
HPAKL117_RS00895	PF08666	SAF domain
HPAKL117_RS00895	PF03102	NeuB family
HPAKL117_RS00900	PF00005	ABC transporter
HPAKL117_RS00905	PF00795	Carbon-nitrogen hydrolase
HPAKL117_RS00915	PF01336	OB-fold nucleic acid binding domain
HPAKL117_RS00915	PF00152	tRNA synthetases class II (D, K and N) 
HPAKL117_RS00920	PF00464	Serine hydroxymethyltransferase
HPAKL117_RS00955	PF03350	Uncharacterized protein family, UPF0114
HPAKL117_RS00960	PF13091	PLD-like domain
HPAKL117_RS00965	PF13183	4Fe-4S dicluster domain
HPAKL117_RS00965	PF13085	2Fe-2S iron-sulfur cluster binding domain
HPAKL117_RS00970	PF00890	FAD binding domain
HPAKL117_RS00970	PF02910	Fumarate reductase flavoprotein C-term
HPAKL117_RS00975	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
HPAKL117_RS00980	PF00121	Triosephosphate isomerase
HPAKL117_RS00990	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD  
HPAKL117_RS00990	PF00132	Bacterial transferase hexapeptide (six repeats)
HPAKL117_RS00995	PF02773	S-adenosylmethionine synthetase, C-terminal domain
HPAKL117_RS00995	PF00438	S-adenosylmethionine synthetase, N-terminal domain
HPAKL117_RS00995	PF02772	S-adenosylmethionine synthetase, central domain
HPAKL117_RS01000	PF00334	Nucleoside diphosphate kinase
HPAKL117_RS01010	PF01783	Ribosomal L32p protein family
HPAKL117_RS01015	PF02504	Fatty acid synthesis protein
HPAKL117_RS01020	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
HPAKL117_RS01020	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
HPAKL117_RS01050	PF01883	Iron-sulfur cluster assembly protein
HPAKL117_RS01050	PF10609	NUBPL iron-transfer P-loop NTPase
HPAKL117_RS01070	PF00183	Hsp90 protein
HPAKL117_RS01075	PF01546	Peptidase family M20/M25/M40
HPAKL117_RS01075	PF07687	Peptidase dimerisation domain
HPAKL117_RS01080	PF13932	GidA associated domain
HPAKL117_RS01080	PF01134	Glucose inhibited division protein A
HPAKL117_RS01085	PF00939	Sodium:sulfate symporter transmembrane region
HPAKL117_RS01095	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
HPAKL117_RS01095	PF13288	DXP reductoisomerase C-terminal domain
HPAKL117_RS01095	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
HPAKL117_RS01105	PF01161	Phosphatidylethanolamine-binding protein
HPAKL117_RS01115	PF00266	Aminotransferase class-V
HPAKL117_RS01120	PF04324	BFD-like [2Fe-2S] binding domain
HPAKL117_RS01120	PF01106	NifU-like domain
HPAKL117_RS01120	PF01592	NifU-like N terminal domain
HPAKL117_RS01130	PF18073	Rubredoxin metal binding domain
HPAKL117_RS01135	PF01625	Peptide methionine sulfoxide reductase
HPAKL117_RS01135	PF01641	SelR domain
HPAKL117_RS01140	PF01925	Sulfite exporter TauE/SafE
HPAKL117_RS01150	PF00916	Sulfate permease family
HPAKL117_RS01150	PF01740	STAS domain
HPAKL117_RS01165	PF02348	Cytidylyltransferase
HPAKL117_RS01180	PF03738	Glutathionylspermidine synthase preATP-grasp
HPAKL117_RS01190	PF08238	Sel1 repeat
HPAKL117_RS01190	PF13181	Tetratricopeptide repeat
HPAKL117_RS01190	PF13176	Tetratricopeptide repeat
HPAKL117_RS01200	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
HPAKL117_RS01200	PF03900	Porphobilinogen deaminase, C-terminal domain
HPAKL117_RS01205	PF04073	Aminoacyl-tRNA editing domain
HPAKL117_RS01205	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
HPAKL117_RS01205	PF03129	Anticodon binding domain
HPAKL117_RS01210	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
HPAKL117_RS01210	PF01488	Shikimate / quinate 5-dehydrogenase
HPAKL117_RS01210	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
HPAKL117_RS01215	PF00348	Polyprenyl synthetase
HPAKL117_RS01230	PF00210	Ferritin-like domain
HPAKL117_RS01235	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HPAKL117_RS01235	PF00512	His Kinase A (phospho-acceptor) domain
HPAKL117_RS01245	PF02119	Flagellar P-ring protein
HPAKL117_RS01250	PF00271	Helicase conserved C-terminal domain
HPAKL117_RS01250	PF00270	DEAD/DEAH box helicase
HPAKL117_RS01265	PF00005	ABC transporter
HPAKL117_RS01265	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
HPAKL117_RS01270	PF00528	Binding-protein-dependent transport system inner membrane component
HPAKL117_RS01270	PF12911	N-terminal TM domain of oligopeptide transport permease C
HPAKL117_RS01290	PF00709	Adenylosuccinate synthetase
HPAKL117_RS01305	PF02163	Peptidase family M50
HPAKL117_RS01310	PF13742	OB-fold nucleic acid binding domain
HPAKL117_RS01310	PF02601	Exonuclease VII, large subunit
HPAKL117_RS01320	PF01555	DNA methylase
HPAKL117_RS01325	PF07724	AAA domain (Cdc48 subfamily)
HPAKL117_RS01325	PF17871	AAA lid domain
HPAKL117_RS01325	PF02861	Clp amino terminal domain, pathogenicity island component
HPAKL117_RS01325	PF10431	C-terminal, D2-small domain, of ClpB protein 
HPAKL117_RS01325	PF00004	ATPase family associated with various cellular activities (AAA)
HPAKL117_RS01330	PF02683	Cytochrome C biogenesis protein transmembrane region
HPAKL117_RS01335	PF01979	Amidohydrolase family
HPAKL117_RS01340	PF01979	Amidohydrolase family
HPAKL117_RS01350	PF04055	Radical SAM superfamily
HPAKL117_RS01350	PF00919	Uncharacterized protein family UPF0004
HPAKL117_RS01375	PF03692	Putative zinc- or iron-chelating domain
HPAKL117_RS01385	PF00218	Indole-3-glycerol phosphate synthase
HPAKL117_RS01395	PF02541	Ppx/GppA phosphatase family
HPAKL117_RS01400	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
HPAKL117_RS01410	PF01702	Queuine tRNA-ribosyltransferase
HPAKL117_RS01420	PF01761	3-dehydroquinate synthase
HPAKL117_RS01430	PF00919	Uncharacterized protein family UPF0004
HPAKL117_RS01430	PF04055	Radical SAM superfamily
HPAKL117_RS01435	PF00004	ATPase family associated with various cellular activities (AAA)
HPAKL117_RS01435	PF17862	AAA+ lid domain
HPAKL117_RS01435	PF06480	FtsH Extracellular
HPAKL117_RS01435	PF01434	Peptidase family M41
HPAKL117_RS01455	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
HPAKL117_RS01455	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
HPAKL117_RS01470	PF04715	Anthranilate synthase component I, N terminal region
HPAKL117_RS01470	PF00425	chorismate binding enzyme
HPAKL117_RS01475	PF00795	Carbon-nitrogen hydrolase
HPAKL117_RS01485	PF00829	Ribosomal prokaryotic L21 protein
HPAKL117_RS01490	PF01016	Ribosomal L27 protein
HPAKL117_RS01495	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
HPAKL117_RS01500	PF00528	Binding-protein-dependent transport system inner membrane component
HPAKL117_RS01505	PF12911	N-terminal TM domain of oligopeptide transport permease C
HPAKL117_RS01505	PF00528	Binding-protein-dependent transport system inner membrane component
HPAKL117_RS01510	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
HPAKL117_RS01510	PF00005	ABC transporter
HPAKL117_RS01515	PF00005	ABC transporter
HPAKL117_RS01515	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
HPAKL117_RS01520	PF01926	50S ribosome-binding GTPase
HPAKL117_RS01520	PF01018	GTP1/OBG
HPAKL117_RS01535	PF00202	Aminotransferase class-III
HPAKL117_RS01550	PF00795	Carbon-nitrogen hydrolase
HPAKL117_RS01555	PF01522	Polysaccharide deacetylase
HPAKL117_RS01565	PF07683	Cobalamin synthesis protein cobW C-terminal domain
HPAKL117_RS01565	PF02492	CobW/HypB/UreG, nucleotide-binding domain
HPAKL117_RS01575	PF01243	Pyridoxamine 5'-phosphate oxidase
HPAKL117_RS01575	PF10615	Protein of unknown function (DUF2470)
HPAKL117_RS01580	PF03485	Arginyl tRNA synthetase N terminal domain
HPAKL117_RS01580	PF05746	DALR anticodon binding domain
HPAKL117_RS01580	PF00750	tRNA synthetases class I (R)
HPAKL117_RS01585	PF02416	mttA/Hcf106 family
HPAKL117_RS01590	PF00625	Guanylate kinase
HPAKL117_RS01610	PF02107	Flagellar L-ring protein
HPAKL117_RS01615	PF02348	Cytidylyltransferase
HPAKL117_RS01620	PF02348	Cytidylyltransferase
HPAKL117_RS01630	PF02606	Tetraacyldisaccharide-1-P 4'-kinase
HPAKL117_RS01635	PF02540	NAD synthase
HPAKL117_RS01645	PF07991	Acetohydroxy acid isomeroreductase, NADPH-binding domain
HPAKL117_RS01645	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
HPAKL117_RS01650	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
HPAKL117_RS01655	PF03776	Septum formation topological specificity factor MinE
HPAKL117_RS01660	PF17782	DprA winged helix domain
HPAKL117_RS01660	PF02481	DNA recombination-mediator protein A
HPAKL117_RS01665	PF03652	Holliday junction resolvase
HPAKL117_RS01670	PF08238	Sel1 repeat
HPAKL117_RS01685	PF00849	RNA pseudouridylate synthase
HPAKL117_RS01690	PF17768	RecJ OB domain
HPAKL117_RS01690	PF01368	DHH family
HPAKL117_RS01690	PF10141	Single-strand DNA-specific exonuclease, C terminal domain
HPAKL117_RS01690	PF02272	DHHA1 domain
HPAKL117_RS01695	PF00117	Glutamine amidotransferase class-I
HPAKL117_RS01695	PF06418	CTP synthase N-terminus
HPAKL117_RS01705	PF08345	Flagellar M-ring protein C-terminal
HPAKL117_RS01705	PF01514	Secretory protein of YscJ/FliF family
HPAKL117_RS01710	PF14842	FliG N-terminal domain
HPAKL117_RS01710	PF14841	FliG middle domain
HPAKL117_RS01710	PF01706	FliG C-terminal domain
HPAKL117_RS01720	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
HPAKL117_RS01720	PF02779	Transketolase, pyrimidine binding domain
HPAKL117_RS01720	PF02780	Transketolase, C-terminal domain
HPAKL117_RS01725	PF06421	GTP-binding protein LepA C-terminus
HPAKL117_RS01725	PF03144	Elongation factor Tu domain 2
HPAKL117_RS01725	PF00679	Elongation factor G C-terminus
HPAKL117_RS01725	PF00009	Elongation factor Tu GTP binding domain
HPAKL117_RS01730	PF00145	C-5 cytosine-specific DNA methylase
HPAKL117_RS01740	PF00460	Flagella basal body rod protein
HPAKL117_RS01740	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
HPAKL117_RS01745	PF00083	Sugar (and other) transporter
HPAKL117_RS01750	PF17854	FtsK alpha domain
HPAKL117_RS01750	PF09397	Ftsk gamma domain
HPAKL117_RS01750	PF01580	FtsK/SpoIIIE family
HPAKL117_RS01760	PF02779	Transketolase, pyrimidine binding domain
HPAKL117_RS01760	PF02780	Transketolase, C-terminal domain
HPAKL117_RS01760	PF00456	Transketolase, thiamine diphosphate binding domain
HPAKL117_RS01765	PF06574	FAD synthetase
HPAKL117_RS01765	PF01687	Riboflavin kinase
HPAKL117_RS01770	PF01728	FtsJ-like methyltransferase
HPAKL117_RS01780	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
HPAKL117_RS01780	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
HPAKL117_RS01790	PF00005	ABC transporter
HPAKL117_RS01790	PF00664	ABC transporter transmembrane region
HPAKL117_RS01810	PF03824	High-affinity nickel-transport protein
HPAKL117_RS01825	PF00403	Heavy-metal-associated domain
HPAKL117_RS01830	PF00403	Heavy-metal-associated domain
HPAKL117_RS01835	PF01066	CDP-alcohol phosphatidyltransferase
HPAKL117_RS01845	PF17862	AAA+ lid domain
HPAKL117_RS01845	PF01434	Peptidase family M41
HPAKL117_RS01845	PF00004	ATPase family associated with various cellular activities (AAA)
HPAKL117_RS01855	PF00072	Response regulator receiver domain
HPAKL117_RS01880	PF02527	rRNA small subunit methyltransferase G
HPAKL117_RS01885	PF02547	Queuosine biosynthesis protein
HPAKL117_RS01890	PF00902	Sec-independent protein translocase protein (TatC)
HPAKL117_RS01900	PF05496	Holliday junction DNA helicase RuvB P-loop domain
HPAKL117_RS01900	PF17864	RuvB AAA lid domain
HPAKL117_RS01900	PF05491	RuvB C-terminal winged helix domain
HPAKL117_RS01905	PF02548	Ketopantoate hydroxymethyltransferase
HPAKL117_RS01930	PF03775	Septum formation inhibitor MinC, C-terminal domain
HPAKL117_RS01935	PF03331	UDP-3-O-acyl N-acetylglycosamine deacetylase
HPAKL117_RS01945	PF00288	GHMP kinases N terminal domain
HPAKL117_RS01955	PF11987	Translation-initiation factor 2
HPAKL117_RS01955	PF00009	Elongation factor Tu GTP binding domain
HPAKL117_RS01955	PF04760	Translation initiation factor IF-2, N-terminal region
HPAKL117_RS01960	PF02033	Ribosome-binding factor A
HPAKL117_RS01965	PF17384	RimP C-terminal SH3 domain
HPAKL117_RS01965	PF02576	RimP N-terminal domain
HPAKL117_RS01970	PF00149	Calcineurin-like phosphoesterase
HPAKL117_RS01975	PF00486	Transcriptional regulatory protein, C terminal
HPAKL117_RS01975	PF00072	Response regulator receiver domain
HPAKL117_RS01985	PF00771	FHIPEP family
HPAKL117_RS01990	PF00312	Ribosomal protein S15
HPAKL117_RS02000	PF01220	Dehydroquinase class II
HPAKL117_RS02005	PF00557	Metallopeptidase family M24
HPAKL117_RS02005	PF01321	Creatinase/Prolidase N-terminal domain
HPAKL117_RS02010	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
HPAKL117_RS02015	PF00448	SRP54-type protein, GTPase domain
HPAKL117_RS02020	PF10609	NUBPL iron-transfer P-loop NTPase
HPAKL117_RS02030	PF04539	Sigma-70 region 3
HPAKL117_RS02030	PF04542	Sigma-70 region 2 
HPAKL117_RS02030	PF04545	Sigma-70, region 4
HPAKL117_RS02035	PF02154	Flagellar motor switch protein FliM
HPAKL117_RS02035	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
HPAKL117_RS02040	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
HPAKL117_RS02040	PF04509	CheC-like family
HPAKL117_RS02055	PF01475	Ferric uptake regulator family
HPAKL117_RS02060	PF16193	AAA C-terminal domain
HPAKL117_RS02060	PF01661	Macro domain
HPAKL117_RS02060	PF12002	MgsA AAA+ ATPase C terminal
HPAKL117_RS02060	PF05496	Holliday junction DNA helicase RuvB P-loop domain
HPAKL117_RS02065	PF13411	MerR HTH family regulatory protein
HPAKL117_RS02070	PF00226	DnaJ domain
HPAKL117_RS02070	PF01556	DnaJ C terminal domain
HPAKL117_RS02080	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
HPAKL117_RS02080	PF01367	5'-3' exonuclease, C-terminal SAM fold
HPAKL117_RS02080	PF01612	3'-5' exonuclease
HPAKL117_RS02080	PF00476	DNA polymerase family A
HPAKL117_RS02085	PF00072	Response regulator receiver domain
HPAKL117_RS02085	PF00486	Transcriptional regulatory protein, C terminal
HPAKL117_RS02090	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
HPAKL117_RS02090	PF02542	YgbB family
HPAKL117_RS02095	PF13180	PDZ domain
HPAKL117_RS02095	PF17820	PDZ domain
HPAKL117_RS02100	PF00324	Amino acid permease
HPAKL117_RS02105	PF01066	CDP-alcohol phosphatidyltransferase
HPAKL117_RS02120	PF00701	Dihydrodipicolinate synthetase family
HPAKL117_RS02130	PF01180	Dihydroorotate dehydrogenase
HPAKL117_RS02135	PF13089	Polyphosphate kinase N-terminal domain
HPAKL117_RS02135	PF17941	Polyphosphate kinase C-terminal domain 1
HPAKL117_RS02135	PF13090	Polyphosphate kinase C-terminal domain 2
HPAKL117_RS02135	PF02503	Polyphosphate kinase middle domain
HPAKL117_RS02150	PF12161	HsdM N-terminal domain
HPAKL117_RS02150	PF02384	N-6 DNA Methylase
HPAKL117_RS02165	PF02899	Phage integrase, N-terminal SAM-like domain
HPAKL117_RS02165	PF00589	Phage integrase family
HPAKL117_RS02170	PF02661	Fic/DOC family
HPAKL117_RS02170	PF12728	Helix-turn-helix domain
HPAKL117_RS02210	PF13614	AAA domain
HPAKL117_RS02225	PF13368	Topoisomerase C-terminal repeat
HPAKL117_RS02225	PF01751	Toprim domain
HPAKL117_RS02225	PF01131	DNA topoisomerase
HPAKL117_RS02250	PF00437	Type II/IV secretion system protein
HPAKL117_RS02290	PF03135	CagE, TrbE, VirB family, component of type IV transporter system
HPAKL117_RS02355	PF00999	Sodium/hydrogen exchanger family
HPAKL117_RS02355	PF02254	TrkA-N domain
HPAKL117_RS02370	PF00528	Binding-protein-dependent transport system inner membrane component
HPAKL117_RS02375	PF03459	TOBE domain
HPAKL117_RS02375	PF00005	ABC transporter
HPAKL117_RS02380	PF00749	tRNA synthetases class I (E and Q), catalytic domain
HPAKL117_RS02390	PF02384	N-6 DNA Methylase
HPAKL117_RS02400	PF03144	Elongation factor Tu domain 2
HPAKL117_RS02400	PF00009	Elongation factor Tu GTP binding domain
HPAKL117_RS02400	PF00679	Elongation factor G C-terminus
HPAKL117_RS02450	PF00830	Ribosomal L28 family
HPAKL117_RS02460	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 
HPAKL117_RS02460	PF00953	Glycosyl transferase family 4
HPAKL117_RS02465	PF02875	Mur ligase family, glutamate ligase domain
HPAKL117_RS02465	PF08245	Mur ligase middle domain
HPAKL117_RS02470	PF04359	Protein of unknown function (DUF493)
HPAKL117_RS02475	PF03061	Thioesterase superfamily
HPAKL117_RS02480	PF00209	Sodium:neurotransmitter symporter family
HPAKL117_RS02485	PF00209	Sodium:neurotransmitter symporter family
HPAKL117_RS02490	PF02253	Phospholipase A1
HPAKL117_RS02495	PF02768	DNA polymerase III beta subunit, C-terminal domain
HPAKL117_RS02495	PF02767	DNA polymerase III beta subunit, central domain
HPAKL117_RS02495	PF00712	DNA polymerase III beta subunit, N-terminal domain
HPAKL117_RS02500	PF00986	DNA gyrase B subunit, carboxyl terminus
HPAKL117_RS02500	PF01751	Toprim domain
HPAKL117_RS02500	PF00204	DNA gyrase B
HPAKL117_RS02500	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HPAKL117_RS02515	PF01551	Peptidase family M23
HPAKL117_RS02515	PF01464	Transglycosylase SLT domain
HPAKL117_RS02515	PF10145	Phage-related minor tail protein
HPAKL117_RS02525	PF15436	Plasminogen-binding protein pgbA N-terminal
HPAKL117_RS02525	PF15437	Plasminogen-binding protein pgbA C-terminal
HPAKL117_RS02530	PF01565	FAD binding domain 
HPAKL117_RS02530	PF02913	FAD linked oxidases, C-terminal domain
HPAKL117_RS02535	PF05173	Dihydrodipicolinate reductase, C-terminus
HPAKL117_RS02535	PF01113	Dihydrodipicolinate reductase, N-terminus
HPAKL117_RS02545	PF03951	Glutamine synthetase, beta-Grasp domain
HPAKL117_RS02545	PF00120	Glutamine synthetase, catalytic domain
HPAKL117_RS02555	PF03948	Ribosomal protein L9, C-terminal domain
HPAKL117_RS02555	PF01281	Ribosomal protein L9, N-terminal domain
HPAKL117_RS02560	PF00227	Proteasome subunit
HPAKL117_RS02565	PF07724	AAA domain (Cdc48 subfamily)
HPAKL117_RS02565	PF10431	C-terminal, D2-small domain, of ClpB protein 
HPAKL117_RS02570	PF01926	50S ribosome-binding GTPase
HPAKL117_RS02570	PF07650	KH domain
HPAKL117_RS02585	PF01177	Asp/Glu/Hydantoin racemase
HPAKL117_RS02590	PF07498	Rho termination factor, N-terminal domain
HPAKL117_RS02590	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
HPAKL117_RS02590	PF07497	Rho termination factor, RNA-binding domain
HPAKL117_RS02595	PF01197	Ribosomal protein L31
HPAKL117_RS02600	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
HPAKL117_RS02605	PF00588	SpoU rRNA Methylase family
HPAKL117_RS02605	PF08032	RNA 2'-O ribose methyltransferase substrate binding
HPAKL117_RS02625	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
HPAKL117_RS02630	PF02801	Beta-ketoacyl synthase, C-terminal domain
HPAKL117_RS02630	PF00109	Beta-ketoacyl synthase, N-terminal domain
HPAKL117_RS02635	PF00550	Phosphopantetheine attachment site
HPAKL117_RS02645	PF01165	Ribosomal protein S21
HPAKL117_RS02660	PF04224	Protein of unknown function, DUF417
HPAKL117_RS02665	PF01678	Diaminopimelate epimerase
HPAKL117_RS02670	PF01594	AI-2E family transporter
HPAKL117_RS02680	PF01926	50S ribosome-binding GTPase
HPAKL117_RS02680	PF06071	Protein of unknown function (DUF933)
HPAKL117_RS02685	PF02789	Cytosol aminopeptidase family, N-terminal domain
HPAKL117_RS02685	PF00883	Cytosol aminopeptidase family, catalytic domain
HPAKL117_RS02695	PF00156	Phosphoribosyl transferase domain
HPAKL117_RS02705	PF02502	Ribose/Galactose Isomerase
HPAKL117_RS02710	PF02163	Peptidase family M50
HPAKL117_RS02715	PF10502	Signal peptidase, peptidase S26 
HPAKL117_RS02720	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
HPAKL117_RS02720	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
HPAKL117_RS02755	PF04509	CheC-like family
HPAKL117_RS02755	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
HPAKL117_RS02760	PF00730	HhH-GPD superfamily base excision DNA repair protein
HPAKL117_RS02760	PF00633	Helix-hairpin-helix motif
HPAKL117_RS02765	PF04023	FeoA domain
HPAKL117_RS02785	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
HPAKL117_RS02785	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
HPAKL117_RS02785	PF17147	Pyruvate:ferredoxin oxidoreductase core domain II
HPAKL117_RS02790	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
HPAKL117_RS02815	PF00912	Transglycosylase
HPAKL117_RS02815	PF00905	Penicillin binding protein transpeptidase domain
HPAKL117_RS02820	PF00155	Aminotransferase class I and II
HPAKL117_RS02825	PF12729	Four helix bundle sensory module for signal transduction
HPAKL117_RS02825	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
HPAKL117_RS02825	PF00672	HAMP domain
HPAKL117_RS02830	PF07196	Flagellin hook IN motif
HPAKL117_RS02830	PF00669	Bacterial flagellin N-terminal helical region
HPAKL117_RS02830	PF00700	Bacterial flagellin C-terminal helical region
HPAKL117_RS02845	PF01208	Uroporphyrinogen decarboxylase (URO-D)
HPAKL117_RS02860	PF00873	AcrB/AcrD/AcrF family
HPAKL117_RS02880	PF00005	ABC transporter
HPAKL117_RS02890	PF03120	NAD-dependent DNA ligase OB-fold domain
HPAKL117_RS02890	PF01653	NAD-dependent DNA ligase adenylation domain
HPAKL117_RS02890	PF00533	BRCA1 C Terminus (BRCT) domain
HPAKL117_RS02895	PF00072	Response regulator receiver domain
HPAKL117_RS02895	PF01584	CheW-like domain
HPAKL117_RS02900	PF01336	OB-fold nucleic acid binding domain
HPAKL117_RS02900	PF00152	tRNA synthetases class II (D, K and N) 
HPAKL117_RS02900	PF02938	GAD domain
HPAKL117_RS02920	PF00719	Inorganic pyrophosphatase
HPAKL117_RS02925	PF00488	MutS domain V
HPAKL117_RS02925	PF01713	Smr domain
HPAKL117_RS02935	PF02875	Mur ligase family, glutamate ligase domain
HPAKL117_RS02935	PF08245	Mur ligase middle domain
HPAKL117_RS02935	PF01225	Mur ligase family, catalytic domain
HPAKL117_RS02940	PF00155	Aminotransferase class I and II
HPAKL117_RS02945	PF04551	GcpE protein
HPAKL117_RS02950	PF14789	Tetrahydrodipicolinate N-succinyltransferase middle
HPAKL117_RS02950	PF14602	Hexapeptide repeat of succinyl-transferase
HPAKL117_RS02965	PF02525	Flavodoxin-like fold
HPAKL117_RS02970	PF14720	NiFe/NiFeSe hydrogenase small subunit C-terminal
HPAKL117_RS02970	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
HPAKL117_RS02970	PF10518	TAT (twin-arginine translocation) pathway signal sequence
HPAKL117_RS02975	PF00374	Nickel-dependent hydrogenase
HPAKL117_RS02980	PF01292	Prokaryotic cytochrome b561
HPAKL117_RS02985	PF01750	Hydrogenase maturation protease
HPAKL117_RS03010	PF06508	Queuosine biosynthesis protein QueC
HPAKL117_RS03015	PF12627	Probable RNA and SrmB- binding site of polymerase A
HPAKL117_RS03015	PF13735	tRNA nucleotidyltransferase domain 2 putative
HPAKL117_RS03015	PF01743	Poly A polymerase head domain
HPAKL117_RS03025	PF00881	Nitroreductase family
HPAKL117_RS03030	PF00749	tRNA synthetases class I (E and Q), catalytic domain
HPAKL117_RS03035	PF02325	YGGT family
HPAKL117_RS03040	PF01464	Transglycosylase SLT domain
HPAKL117_RS03040	PF11873	Membrane-bound lytic murein transglycosylase C, N-terminal domain
HPAKL117_RS03045	PF00483	Nucleotidyl transferase
HPAKL117_RS03055	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
HPAKL117_RS03060	PF10415	Fumarase C C-terminus
HPAKL117_RS03060	PF00206	Lyase
HPAKL117_RS03070	PF00852	Glycosyltransferase family 10 (fucosyltransferase) C-term
HPAKL117_RS03070	PF18025	Alpha-(1,3)-fucosyltransferase FucT N-terminal domain
HPAKL117_RS03080	PF00210	Ferritin-like domain
HPAKL117_RS03085	PF04055	Radical SAM superfamily
HPAKL117_RS03090	PF01103	Surface antigen
HPAKL117_RS03090	PF07244	Surface antigen variable number repeat
HPAKL117_RS03095	PF04055	Radical SAM superfamily
HPAKL117_RS03105	PF02934	GatB/GatE catalytic domain
HPAKL117_RS03105	PF02637	GatB domain
HPAKL117_RS03120	PF00075	RNase H
HPAKL117_RS03125	PF14622	Ribonuclease-III-like
HPAKL117_RS03125	PF00035	Double-stranded RNA binding motif
HPAKL117_RS03130	PF01264	Chorismate synthase
HPAKL117_RS03135	PF10788	Protein of unknown function (DUF2603)
HPAKL117_RS03140	PF04055	Radical SAM superfamily
HPAKL117_RS03140	PF06969	HemN C-terminal domain
HPAKL117_RS03145	PF02754	Cysteine-rich domain
HPAKL117_RS03170	PF00155	Aminotransferase class I and II
HPAKL117_RS03180	PF18644	Phage integrase SAM-like domain
HPAKL117_RS03180	PF00589	Phage integrase family
HPAKL117_RS03185	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
HPAKL117_RS03185	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
HPAKL117_RS03190	PF01925	Sulfite exporter TauE/SafE
HPAKL117_RS03195	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
HPAKL117_RS03195	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
HPAKL117_RS03200	PF03477	ATP cone domain
HPAKL117_RS03200	PF02867	Ribonucleotide reductase, barrel domain
HPAKL117_RS03200	PF00317	Ribonucleotide reductase, all-alpha domain
HPAKL117_RS03215	PF14602	Hexapeptide repeat of succinyl-transferase
HPAKL117_RS03215	PF12804	MobA-like NTP transferase domain
HPAKL117_RS03225	PF00813	FliP family
HPAKL117_RS03235	PF07670	Nucleoside recognition
HPAKL117_RS03235	PF07664	Ferrous iron transport protein B C terminus
HPAKL117_RS03235	PF02421	Ferrous iron transport protein B
HPAKL117_RS03245	PF00108	Thiolase, N-terminal domain
HPAKL117_RS03245	PF02803	Thiolase, C-terminal domain
HPAKL117_RS03250	PF01144	Coenzyme A transferase
HPAKL117_RS03255	PF01144	Coenzyme A transferase
HPAKL117_RS03260	PF02667	Short chain fatty acid transporter
HPAKL117_RS03270	PF05378	Hydantoinase/oxoprolinase N-terminal region
HPAKL117_RS03270	PF01968	Hydantoinase/oxoprolinase
HPAKL117_RS03275	PF02538	Hydantoinase B/oxoprolinase
HPAKL117_RS03280	PF08882	Acetone carboxylase gamma subunit
HPAKL117_RS03295	PF01219	Prokaryotic diacylglycerol kinase
HPAKL117_RS03300	PF03989	DNA gyrase C-terminal domain, beta-propeller
HPAKL117_RS03300	PF00521	DNA gyrase/topoisomerase IV, subunit A
HPAKL117_RS03310	PF00158	Sigma-54 interaction domain
HPAKL117_RS03310	PF00072	Response regulator receiver domain
HPAKL117_RS03320	PF17755	UvrA DNA-binding domain
HPAKL117_RS03320	PF00005	ABC transporter
HPAKL117_RS03320	PF17760	UvrA interaction domain
HPAKL117_RS03330	PF01795	MraW methylase family
HPAKL117_RS03340	PF01887	S-adenosyl-l-methionine hydroxide adenosyltransferase
HPAKL117_RS03355	PF04552	Sigma-54, DNA binding domain
HPAKL117_RS03355	PF04963	Sigma-54 factor, core binding domain
HPAKL117_RS03355	PF00309	Sigma-54 factor, Activator interacting domain (AID) 
HPAKL117_RS03360	PF12399	Branched-chain amino acid ATP-binding cassette transporter
HPAKL117_RS03360	PF00005	ABC transporter
HPAKL117_RS03370	PF12170	DNA polymerase III tau subunit V interacting with alpha
HPAKL117_RS03370	PF12169	DNA polymerase III subunits gamma and tau domain III
HPAKL117_RS03375	PF01810	LysE type translocator
HPAKL117_RS03395	PF00710	Asparaginase, N-terminal
HPAKL117_RS03395	PF17763	Glutaminase/Asparaginase C-terminal domain
HPAKL117_RS03400	PF03605	Anaerobic c4-dicarboxylate membrane transporter
HPAKL117_RS03420	PF01207	Dihydrouridine synthase (Dus)
HPAKL117_RS03425	PF01171	PP-loop family
HPAKL117_RS03455	PF00919	Uncharacterized protein family UPF0004
HPAKL117_RS03455	PF04055	Radical SAM superfamily
HPAKL117_RS03460	PF00156	Phosphoribosyl transferase domain
HPAKL117_RS03465	PF00266	Aminotransferase class-V
HPAKL117_RS03470	PF04608	Phosphatidylglycerophosphatase A
HPAKL117_RS03475	PF07478	D-ala D-ala ligase C-terminus
HPAKL117_RS03475	PF01820	D-ala D-ala ligase N-terminus
HPAKL117_RS03485	PF08245	Mur ligase middle domain
HPAKL117_RS03485	PF02875	Mur ligase family, glutamate ligase domain
HPAKL117_RS03485	PF01225	Mur ligase family, catalytic domain
HPAKL117_RS03490	PF01230	HIT domain
HPAKL117_RS03495	PF14572	Phosphoribosyl synthetase-associated domain
HPAKL117_RS03495	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
HPAKL117_RS03510	PF01479	S4 domain
HPAKL117_RS03510	PF00849	RNA pseudouridylate synthase
HPAKL117_RS03520	PF02390	Putative methyltransferase 
HPAKL117_RS03525	PF00005	ABC transporter
HPAKL117_RS03545	PF07195	Flagellar hook-associated protein 2 C-terminus
HPAKL117_RS03545	PF02465	Flagellar hook-associated protein 2 N-terminus
HPAKL117_RS03550	PF02561	Flagellar protein FliS
HPAKL117_RS03560	PF00581	Rhodanese-like domain
HPAKL117_RS03560	PF00899	ThiF family
HPAKL117_RS03570	PF00795	Carbon-nitrogen hydrolase
HPAKL117_RS03575	PF03553	Na+/H+ antiporter family
HPAKL117_RS03575	PF13726	Na+-H+ antiporter family
HPAKL117_RS03580	PF01554	MatE
HPAKL117_RS03585	PF01966	HD domain
HPAKL117_RS03585	PF00013	KH domain
HPAKL117_RS03585	PF12072	Domain of unknown function (DUF3552)
HPAKL117_RS03600	PF00448	SRP54-type protein, GTPase domain
HPAKL117_RS03625	PF06463	Molybdenum Cofactor Synthesis C
HPAKL117_RS03625	PF04055	Radical SAM superfamily
HPAKL117_RS03630	PF12804	MobA-like NTP transferase domain
HPAKL117_RS03635	PF01312	FlhB HrpN YscU SpaS Family
HPAKL117_RS03645	PF01520	N-acetylmuramoyl-L-alanine amidase
HPAKL117_RS03655	PF01479	S4 domain
HPAKL117_RS03655	PF00579	tRNA synthetases class I (W and Y)
HPAKL117_RS03660	PF04607	Region found in RelA / SpoT proteins
HPAKL117_RS03660	PF13291	ACT domain
HPAKL117_RS03660	PF02824	TGS domain
HPAKL117_RS03665	PF01192	RNA polymerase Rpb6 
HPAKL117_RS03670	PF00696	Amino acid kinase family
HPAKL117_RS03680	PF00330	Aconitase family (aconitate hydratase)
HPAKL117_RS03680	PF06434	Aconitate hydratase 2 N-terminus
HPAKL117_RS03680	PF11791	Aconitate B N-terminal domain
HPAKL117_RS03710	PF03548	Outer membrane lipoprotein carrier protein LolA
HPAKL117_RS03715	PF02810	SEC-C motif
HPAKL117_RS03715	PF07517	SecA DEAD-like domain
HPAKL117_RS03715	PF01043	SecA preprotein cross-linking domain
HPAKL117_RS03715	PF07516	SecA Wing and Scaffold domain
HPAKL117_RS03735	PF01420	Type I restriction modification DNA specificity domain
HPAKL117_RS03740	PF00403	Heavy-metal-associated domain
HPAKL117_RS03745	PF13335	Magnesium chelatase, subunit ChlI C-terminal
HPAKL117_RS03745	PF01078	Magnesium chelatase, subunit ChlI
HPAKL117_RS03750	PF01327	Polypeptide deformylase
HPAKL117_RS03755	PF00574	Clp protease
HPAKL117_RS03760	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
HPAKL117_RS03760	PF05698	Bacterial trigger factor protein (TF) C-terminus
HPAKL117_RS03760	PF05697	Bacterial trigger factor protein (TF)
HPAKL117_RS03770	PF05211	Neuraminyllactose-binding hemagglutinin precursor (NLBH)
HPAKL117_RS03775	PF01967	MoaC family
HPAKL117_RS03780	PF00994	Probable molybdopterin binding domain
HPAKL117_RS03785	PF02391	MoaE protein
HPAKL117_RS03795	PF00925	GTP cyclohydrolase II
HPAKL117_RS03805	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
HPAKL117_RS03805	PF00925	GTP cyclohydrolase II
HPAKL117_RS03820	PF01648	4'-phosphopantetheinyl transferase superfamily
HPAKL117_RS03825	PF03748	Flagellar basal body-associated protein FliL
HPAKL117_RS03845	PF00753	Metallo-beta-lactamase superfamily
HPAKL117_RS03850	PF00899	ThiF family
HPAKL117_RS03855	PF01618	MotA/TolQ/ExbB proton channel family
HPAKL117_RS03860	PF13677	Membrane MotB of proton-channel complex MotA/MotB 
HPAKL117_RS03860	PF00691	OmpA family
HPAKL117_RS03880	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
HPAKL117_RS03885	PF00571	CBS domain
HPAKL117_RS03885	PF00005	ABC transporter
HPAKL117_RS03900	PF02151	UvrB/uvrC motif
HPAKL117_RS03900	PF08459	UvrC Helix-hairpin-helix N-terminal
HPAKL117_RS03900	PF01541	GIY-YIG catalytic domain
HPAKL117_RS03905	PF03447	Homoserine dehydrogenase, NAD binding domain
HPAKL117_RS03905	PF00742	Homoserine dehydrogenase
HPAKL117_RS03905	PF01842	ACT domain
HPAKL117_RS03910	PF02021	Uncharacterised protein family UPF0102
HPAKL117_RS03915	PF00085	Thioredoxin
HPAKL117_RS03920	PF07992	Pyridine nucleotide-disulphide oxidoreductase
HPAKL117_RS03930	PF00076	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
HPAKL117_RS03935	PF00119	ATP synthase A chain
HPAKL117_RS03940	PF00571	CBS domain
HPAKL117_RS03940	PF00478	IMP dehydrogenase / GMP reductase domain
HPAKL117_RS03945	PF01425	Amidase
HPAKL117_RS03950	PF01121	Dephospho-CoA kinase
HPAKL117_RS03955	PF17284	Spermidine synthase tetramerisation domain
HPAKL117_RS03965	PF01926	50S ribosome-binding GTPase
HPAKL117_RS03965	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
HPAKL117_RS03970	PF00216	Bacterial DNA-binding protein
HPAKL117_RS03995	PF02719	Polysaccharide biosynthesis protein
HPAKL117_RS04000	PF04127	DNA / pantothenate metabolism flavoprotein
HPAKL117_RS04000	PF02441	Flavoprotein
HPAKL117_RS04010	PF02581	Thiamine monophosphate synthase
HPAKL117_RS04015	PF08543	Phosphomethylpyrimidine kinase
HPAKL117_RS04020	PF02110	Hydroxyethylthiazole kinase family
HPAKL117_RS04025	PF18766	SWI2/SNF2 ATPase
HPAKL117_RS04025	PF12008	Type I restriction and modification enzyme - subunit R C terminal
HPAKL117_RS04025	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
HPAKL117_RS04030	PF01420	Type I restriction modification DNA specificity domain
HPAKL117_RS04035	PF02384	N-6 DNA Methylase
HPAKL117_RS04035	PF12161	HsdM N-terminal domain
HPAKL117_RS04040	PF01569	PAP2 superfamily
HPAKL117_RS04050	PF12848	ABC transporter
HPAKL117_RS04050	PF00005	ABC transporter
HPAKL117_RS04055	PF00478	IMP dehydrogenase / GMP reductase domain
HPAKL117_RS04060	PF13580	SIS domain
HPAKL117_RS04065	PF01467	Cytidylyltransferase-like
HPAKL117_RS04065	PF00294	pfkB family carbohydrate kinase
HPAKL117_RS04070	PF01370	NAD dependent epimerase/dehydratase family
HPAKL117_RS04085	PF03309	Type III pantothenate kinase
HPAKL117_RS04090	PF15437	Plasminogen-binding protein pgbA C-terminal
HPAKL117_RS04100	PF00692	dUTPase
HPAKL117_RS04105	PF01272	Transcription elongation factor, GreA/GreB, C-term
HPAKL117_RS04105	PF03449	Transcription elongation factor, N-terminal
HPAKL117_RS04110	PF02684	Lipid-A-disaccharide synthetase
HPAKL117_RS04120	PF01155	Hydrogenase/urease nickel incorporation, metallochaperone, hypA
HPAKL117_RS04125	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
HPAKL117_RS04125	PF07559	Flagellar basal body protein FlaE
HPAKL117_RS04125	PF07196	Flagellin hook IN motif
HPAKL117_RS04125	PF00460	Flagella basal body rod protein
HPAKL117_RS04130	PF02611	CDP-diacylglycerol pyrophosphatase
HPAKL117_RS04140	PF08274	PhnA Zinc-Ribbon 
HPAKL117_RS04140	PF03831	PhnA domain
HPAKL117_RS04155	PF06628	Catalase-related immune-responsive
HPAKL117_RS04155	PF00199	Catalase
HPAKL117_RS04160	PF07715	TonB-dependent Receptor Plug Domain
HPAKL117_RS04160	PF00593	TonB dependent receptor
HPAKL117_RS04165	PF02075	Crossover junction endodeoxyribonuclease RuvC
HPAKL117_RS04190	PF01330	RuvA N terminal domain
HPAKL117_RS04190	PF07499	RuvA, C-terminal domain
HPAKL117_RS04200	PF03023	Lipid II flippase MurJ
HPAKL117_RS04205	PF01406	tRNA synthetases class I (C) catalytic domain
HPAKL117_RS04205	PF09190	DALR domain
HPAKL117_RS04210	PF03797	Autotransporter beta-domain
HPAKL117_RS04210	PF02691	Vacuolating cyotoxin
HPAKL117_RS04215	PF00005	ABC transporter
HPAKL117_RS04220	PF01032	FecCD transport family
HPAKL117_RS04225	PF00106	short chain dehydrogenase
HPAKL117_RS04230	PF03061	Thioesterase superfamily
HPAKL117_RS04265	PF01924	Hydrogenase formation hypA family
HPAKL117_RS04270	PF01455	HupF/HypC family
HPAKL117_RS04275	PF02492	CobW/HypB/UreG, nucleotide-binding domain
HPAKL117_RS04290	PF00871	Acetokinase family
HPAKL117_RS04295	PF01515	Phosphate acetyl/butaryl transferase
HPAKL117_RS04305	PF03963	Flagellar hook capping protein - N-terminal region
HPAKL117_RS04305	PF13860	FlgD Ig-like domain
HPAKL117_RS04305	PF13861	FlgD Tudor-like domain
HPAKL117_RS04310	PF07559	Flagellar basal body protein FlaE
HPAKL117_RS04310	PF07559	Flagellar basal body protein FlaE
HPAKL117_RS04310	PF00460	Flagella basal body rod protein
HPAKL117_RS04310	PF00460	Flagella basal body rod protein
HPAKL117_RS04310	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
HPAKL117_RS04310	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
HPAKL117_RS04315	PF07669	Eco57I restriction-modification methylase
HPAKL117_RS04315	PF02384	N-6 DNA Methylase
HPAKL117_RS04320	PF00580	UvrD/REP helicase N-terminal domain
HPAKL117_RS04320	PF13361	UvrD-like helicase C-terminal domain
HPAKL117_RS04355	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
HPAKL117_RS04355	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
HPAKL117_RS04355	PF02142	MGS-like domain
HPAKL117_RS04360	PF01027	Inhibitor of apoptosis-promoting Bax1
HPAKL117_RS04365	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
HPAKL117_RS04365	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
HPAKL117_RS04370	PF03797	Autotransporter beta-domain
HPAKL117_RS04370	PF02691	Vacuolating cyotoxin
HPAKL117_RS04380	PF01361	Tautomerase enzyme
HPAKL117_RS04385	PF02132	RecR protein
HPAKL117_RS04390	PF01142	tRNA pseudouridine synthase D (TruD)
HPAKL117_RS04395	PF01435	Peptidase family M48
HPAKL117_RS04400	PF01227	GTP cyclohydrolase I
HPAKL117_RS04405	PF00348	Polyprenyl synthetase
HPAKL117_RS04410	PF01975	Survival protein SurE
HPAKL117_RS04420	PF01242	6-pyruvoyl tetrahydropterin synthase
HPAKL117_RS04455	PF00528	Binding-protein-dependent transport system inner membrane component
HPAKL117_RS04460	PF00497	Bacterial extracellular solute-binding proteins, family 3
HPAKL117_RS04465	PF01168	Alanine racemase, N-terminal domain
HPAKL117_RS04465	PF00842	Alanine racemase, C-terminal domain
HPAKL117_RS04470	PF01235	Sodium:alanine symporter family
HPAKL117_RS04475	PF01266	FAD dependent oxidoreductase
HPAKL117_RS04480	PF01042	Endoribonuclease L-PSP
HPAKL117_RS04490	PF13146	TRL-like protein family
HPAKL117_RS04510	PF03553	Na+/H+ antiporter family
HPAKL117_RS04530	PF02590	Predicted SPOUT methyltransferase
HPAKL117_RS04535	PF01039	Carboxyl transferase domain
HPAKL117_RS04535	PF17848	Acetyl-coA carboxylase zinc finger domain
HPAKL117_RS04545	PF02464	Competence-damaged protein
HPAKL117_RS04545	PF00994	Probable molybdopterin binding domain
HPAKL117_RS04545	PF18146	Damage-inducible protein CinA KH domain
HPAKL117_RS04555	PF00881	Nitroreductase family
HPAKL117_RS04560	PF01790	Prolipoprotein diacylglyceryl transferase
HPAKL117_RS04565	PF00849	RNA pseudouridylate synthase
HPAKL117_RS04570	PF04413	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
HPAKL117_RS04570	PF02390	Putative methyltransferase 
HPAKL117_RS04580	PF01784	NIF3 (NGG1p interacting factor 3)
HPAKL117_RS04585	PF02091	Glycyl-tRNA synthetase alpha subunit
HPAKL117_RS04590	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
HPAKL117_RS04590	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
HPAKL117_RS04605	PF01926	50S ribosome-binding GTPase
HPAKL117_RS04605	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
HPAKL117_RS04615	PF09827	CRISPR associated protein Cas2
HPAKL117_RS04625	PF00873	AcrB/AcrD/AcrF family
HPAKL117_RS04640	PF02092	Glycyl-tRNA synthetase beta subunit
HPAKL117_RS04650	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
HPAKL117_RS04650	PF01676	Metalloenzyme superfamily
HPAKL117_RS04655	PF02686	Glu-tRNAGln amidotransferase C subunit
HPAKL117_RS04660	PF00202	Aminotransferase class-III
HPAKL117_RS04670	PF02491	SHS2 domain inserted in FTSA
HPAKL117_RS04675	PF12327	FtsZ family, C-terminal domain
HPAKL117_RS04675	PF00091	Tubulin/FtsZ family, GTPase domain
HPAKL117_RS04685	PF12323	Helix-turn-helix domain
HPAKL117_RS04685	PF07282	Putative transposase DNA-binding domain
HPAKL117_RS04685	PF01385	Probable transposase
HPAKL117_RS04695	PF00924	Mechanosensitive ion channel
HPAKL117_RS04705	PF02601	Exonuclease VII, large subunit
HPAKL117_RS04705	PF13742	OB-fold nucleic acid binding domain
HPAKL117_RS04810	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
HPAKL117_RS04810	PF17944	Arginine decarboxylase C-terminal helical extension
HPAKL117_RS04810	PF17810	Arginine decarboxylase helical bundle domain
HPAKL117_RS04825	PF08003	Protein of unknown function (DUF1698)
HPAKL117_RS04835	PF00133	tRNA synthetases class I (I, L, M and V)
HPAKL117_RS04835	PF01588	Putative tRNA binding domain
HPAKL117_RS04835	PF09334	tRNA synthetases class I (M)
HPAKL117_RS04845	PF00924	Mechanosensitive ion channel
HPAKL117_RS04880	PF00958	GMP synthase C terminal domain
HPAKL117_RS04880	PF00117	Glutamine amidotransferase class-I
HPAKL117_RS04880	PF02540	NAD synthase
HPAKL117_RS04890	PF00384	Molybdopterin oxidoreductase
HPAKL117_RS04890	PF18364	Molybdopterin oxidoreductase N-terminal domain
HPAKL117_RS04890	PF01568	Molydopterin dinucleotide binding domain
HPAKL117_RS04900	PF02347	Glycine cleavage system P-protein
HPAKL117_RS04905	PF01230	HIT domain
HPAKL117_RS04910	PF01409	tRNA synthetases class II core domain (F)
HPAKL117_RS04910	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
HPAKL117_RS04915	PF03484	tRNA synthetase B5 domain
HPAKL117_RS04915	PF03147	Ferredoxin-fold anticodon binding domain
HPAKL117_RS04915	PF01588	Putative tRNA binding domain
HPAKL117_RS04915	PF17759	Phenylalanyl tRNA synthetase beta chain CLM domain
HPAKL117_RS04920	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
HPAKL117_RS04925	PF02401	LytB protein
HPAKL117_RS04930	PF00575	S1 RNA binding domain
HPAKL117_RS04940	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
HPAKL117_RS04940	PF01842	ACT domain
HPAKL117_RS04940	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
HPAKL117_RS04945	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
HPAKL117_RS04950	PF01168	Alanine racemase, N-terminal domain
HPAKL117_RS04960	PF01584	CheW-like domain
HPAKL117_RS04960	PF00072	Response regulator receiver domain
HPAKL117_RS04965	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HPAKL117_RS04965	PF02895	Signal transducing histidine kinase, homodimeric domain
HPAKL117_RS04965	PF00072	Response regulator receiver domain
HPAKL117_RS04965	PF01584	CheW-like domain
HPAKL117_RS04965	PF01627	Hpt domain
HPAKL117_RS04970	PF01584	CheW-like domain
HPAKL117_RS04975	PF08534	Redoxin
HPAKL117_RS04980	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
HPAKL117_RS04980	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
HPAKL117_RS04985	PF13649	Methyltransferase domain
HPAKL117_RS04990	PF18319	PriA DNA helicase Cys-rich region (CRR) domain
HPAKL117_RS04990	PF18074	Primosomal protein N C-terminal domain
HPAKL117_RS04990	PF00270	DEAD/DEAH box helicase
HPAKL117_RS04990	PF00271	Helicase conserved C-terminal domain
HPAKL117_RS05015	PF01435	Peptidase family M48
HPAKL117_RS05020	PF17827	PrmC N-terminal domain
HPAKL117_RS05020	PF05175	Methyltransferase small domain
HPAKL117_RS05025	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
HPAKL117_RS05025	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
HPAKL117_RS05030	PF18025	Alpha-(1,3)-fucosyltransferase FucT N-terminal domain
HPAKL117_RS05030	PF00852	Glycosyltransferase family 10 (fucosyltransferase) C-term
HPAKL117_RS05035	PF01578	Cytochrome C assembly protein
HPAKL117_RS05035	PF05140	ResB-like family 
HPAKL117_RS05045	PF00762	Ferrochelatase
HPAKL117_RS05055	PF04452	RNA methyltransferase
HPAKL117_RS05065	PF00692	dUTPase
HPAKL117_RS05070	PF00364	Biotin-requiring enzyme
HPAKL117_RS05075	PF02785	Biotin carboxylase C-terminal domain
HPAKL117_RS05075	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
HPAKL117_RS05075	PF00289	Biotin carboxylase, N-terminal domain
HPAKL117_RS05095	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
HPAKL117_RS05105	PF00268	Ribonucleotide reductase, small chain
HPAKL117_RS05120	PF01416	tRNA pseudouridine synthase
HPAKL117_RS05125	PF01370	NAD dependent epimerase/dehydratase family
HPAKL117_RS05150	PF08238	Sel1 repeat
HPAKL117_RS05155	PF01081	KDPG and KHG aldolase
HPAKL117_RS05160	PF00920	Dehydratase family
HPAKL117_RS05165	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
HPAKL117_RS05165	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
HPAKL117_RS05170	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
HPAKL117_RS05175	PF02685	Glucokinase
HPAKL117_RS05180	PF00107	Zinc-binding dehydrogenase
HPAKL117_RS05180	PF08240	Alcohol dehydrogenase GroES-like domain
HPAKL117_RS05200	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
HPAKL117_RS05210	PF17147	Pyruvate:ferredoxin oxidoreductase core domain II
HPAKL117_RS05210	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
HPAKL117_RS05215	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
HPAKL117_RS05220	PF00206	Lyase
HPAKL117_RS05220	PF10397	Adenylosuccinate lyase C-terminus
HPAKL117_RS05230	PF12344	Ultra-violet resistance protein B
HPAKL117_RS05230	PF02151	UvrB/uvrC motif
HPAKL117_RS05230	PF17757	UvrB interaction domain
HPAKL117_RS05230	PF00271	Helicase conserved C-terminal domain
HPAKL117_RS05230	PF04851	Type III restriction enzyme, res subunit
HPAKL117_RS05255	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
HPAKL117_RS05255	PF00460	Flagella basal body rod protein
HPAKL117_RS05255	PF07559	Flagellar basal body protein FlaE
HPAKL117_RS05270	PF00145	C-5 cytosine-specific DNA methylase
HPAKL117_RS05285	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
HPAKL117_RS05295	PF00691	OmpA family
HPAKL117_RS05300	PF07676	WD40-like Beta Propeller Repeat
HPAKL117_RS05310	PF02472	Biopolymer transport protein ExbD/TolR
HPAKL117_RS05315	PF01618	MotA/TolQ/ExbB proton channel family
HPAKL117_RS05320	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
HPAKL117_RS05325	PF02874	ATP synthase alpha/beta family, beta-barrel domain
HPAKL117_RS05325	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
HPAKL117_RS05330	PF00231	ATP synthase
HPAKL117_RS05335	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
HPAKL117_RS05335	PF02874	ATP synthase alpha/beta family, beta-barrel domain
HPAKL117_RS05335	PF00306	ATP synthase alpha/beta chain, C terminal domain
HPAKL117_RS05345	PF00430	ATP synthase B/B' CF(0)
HPAKL117_RS05355	PF02195	ParB-like nuclease domain
HPAKL117_RS05355	PF17762	HTH domain found in ParB protein
HPAKL117_RS05360	PF13614	AAA domain
HPAKL117_RS05365	PF08279	HTH domain
HPAKL117_RS05365	PF03099	Biotin/lipoate A/B protein ligase family
HPAKL117_RS05365	PF02237	Biotin protein ligase C terminal domain
HPAKL117_RS05370	PF00551	Formyl transferase
HPAKL117_RS05370	PF02911	Formyl transferase, C-terminal domain
HPAKL117_RS05395	PF01245	Ribosomal protein L19
HPAKL117_RS05400	PF01746	tRNA (Guanine-1)-methyltransferase
HPAKL117_RS05405	PF01782	RimM N-terminal domain
HPAKL117_RS05405	PF05239	PRC-barrel domain
HPAKL117_RS05415	PF00886	Ribosomal protein S16
HPAKL117_RS05420	PF02881	SRP54-type protein, helical bundle domain
HPAKL117_RS05420	PF00448	SRP54-type protein, GTPase domain
HPAKL117_RS05420	PF02978	Signal peptide binding domain
HPAKL117_RS05425	PF10458	Valyl tRNA synthetase tRNA binding arm
HPAKL117_RS05425	PF00133	tRNA synthetases class I (I, L, M and V)
HPAKL117_RS05425	PF08264	Anticodon-binding domain of tRNA
HPAKL117_RS05430	PF02623	FliW protein
HPAKL117_RS05435	PF03033	Glycosyltransferase family 28 N-terminal domain
HPAKL117_RS05435	PF04101	Glycosyltransferase family 28 C-terminal domain
HPAKL117_RS05450	PF14748	Pyrroline-5-carboxylate reductase dimerisation
HPAKL117_RS05450	PF03807	NADP oxidoreductase coenzyme F420-dependent
HPAKL117_RS05470	PF02130	Uncharacterized protein family UPF0054
HPAKL117_RS05475	PF00258	Flavodoxin
HPAKL117_RS05490	PF07992	Pyridine nucleotide-disulphide oxidoreductase
HPAKL117_RS05500	PF00342	Phosphoglucose isomerase
HPAKL117_RS05510	PF02554	Carbon starvation protein CstA
HPAKL117_RS05510	PF13722	5TM C-terminal transporter carbon starvation CstA
HPAKL117_RS05515	PF00528	Binding-protein-dependent transport system inner membrane component
HPAKL117_RS05520	PF00528	Binding-protein-dependent transport system inner membrane component
HPAKL117_RS05525	PF00005	ABC transporter
HPAKL117_RS05545	PF07690	Major Facilitator Superfamily
HPAKL117_RS05550	PF00860	Permease family
HPAKL117_RS05560	PF01048	Phosphorylase superfamily
HPAKL117_RS05565	PF01676	Metalloenzyme superfamily
HPAKL117_RS05570	PF01773	Na+ dependent nucleoside transporter N-terminus
HPAKL117_RS05570	PF07662	Na+ dependent nucleoside transporter C-terminus
HPAKL117_RS05580	PF07690	Major Facilitator Superfamily
HPAKL117_RS05585	PF01171	PP-loop family
HPAKL117_RS05590	PF02080	TrkA-C domain
HPAKL117_RS05590	PF02254	TrkA-N domain
HPAKL117_RS05590	PF00999	Sodium/hydrogen exchanger family
HPAKL117_RS05595	PF01554	MatE
HPAKL117_RS05600	PF07690	Major Facilitator Superfamily
HPAKL117_RS05605	PF00194	Eukaryotic-type carbonic anhydrase
HPAKL117_RS05615	PF01118	Semialdehyde dehydrogenase, NAD binding domain
HPAKL117_RS05615	PF02774	Semialdehyde dehydrogenase, dimerisation domain
HPAKL117_RS05620	PF03129	Anticodon binding domain
HPAKL117_RS05620	PF13393	Histidyl-tRNA synthetase
HPAKL117_RS05625	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
HPAKL117_RS05635	PF00009	Elongation factor Tu GTP binding domain
HPAKL117_RS05635	PF14492	Elongation Factor G, domain II
HPAKL117_RS05635	PF03764	Elongation factor G, domain IV
HPAKL117_RS05635	PF00679	Elongation factor G C-terminus
HPAKL117_RS05635	PF03144	Elongation factor Tu domain 2
HPAKL117_RS05640	PF00177	Ribosomal protein S7p/S5e
HPAKL117_RS05645	PF00164	Ribosomal protein S12/S23
HPAKL117_RS05650	PF04983	RNA polymerase Rpb1, domain 3
HPAKL117_RS05650	PF00562	RNA polymerase Rpb2, domain 6
HPAKL117_RS05650	PF00623	RNA polymerase Rpb1, domain 2
HPAKL117_RS05650	PF10385	RNA polymerase beta subunit external 1 domain
HPAKL117_RS05650	PF04565	RNA polymerase Rpb2, domain 3
HPAKL117_RS05650	PF04561	RNA polymerase Rpb2, domain 2
HPAKL117_RS05650	PF04563	RNA polymerase beta subunit
HPAKL117_RS05650	PF04560	RNA polymerase Rpb2, domain 7
HPAKL117_RS05650	PF04998	RNA polymerase Rpb1, domain 5
HPAKL117_RS05650	PF05000	RNA polymerase Rpb1, domain 4
HPAKL117_RS05650	PF04997	RNA polymerase Rpb1, domain 1
HPAKL117_RS05655	PF00542	Ribosomal protein L7/L12 C-terminal domain
HPAKL117_RS05655	PF16320	Ribosomal protein L7/L12 dimerisation domain
HPAKL117_RS05660	PF00466	Ribosomal protein L10
HPAKL117_RS05665	PF00687	Ribosomal protein L1p/L10e family
HPAKL117_RS05670	PF00298	Ribosomal protein L11, RNA binding domain
HPAKL117_RS05670	PF03946	Ribosomal protein L11, N-terminal domain
HPAKL117_RS05675	PF02357	Transcription termination factor nusG
HPAKL117_RS05690	PF00471	Ribosomal protein L33
HPAKL117_RS05695	PF00009	Elongation factor Tu GTP binding domain
HPAKL117_RS05695	PF03144	Elongation factor Tu domain 2
HPAKL117_RS05695	PF03143	Elongation factor Tu C-terminal domain
HPAKL117_RS05720	PF00664	ABC transporter transmembrane region
HPAKL117_RS05720	PF00005	ABC transporter
HPAKL117_RS05730	PF02086	D12 class N6 adenine-specific DNA methyltransferase
HPAKL117_RS05735	PF05315	ICEA Protein
HPAKL117_RS05740	PF00132	Bacterial transferase hexapeptide (six repeats)
HPAKL117_RS05755	PF00137	ATP synthase subunit C
HPAKL117_RS05760	PF03725	3' exoribonuclease family, domain 2
HPAKL117_RS05760	PF01138	3' exoribonuclease family, domain 1
HPAKL117_RS05760	PF00575	S1 RNA binding domain
HPAKL117_RS05760	PF00013	KH domain
HPAKL117_RS05770	PF03968	OstA-like protein
HPAKL117_RS05770	PF04453	LPS transport system D
HPAKL117_RS05780	PF02843	Phosphoribosylglycinamide synthetase, C domain
HPAKL117_RS05780	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
HPAKL117_RS05780	PF02844	Phosphoribosylglycinamide synthetase, N domain
HPAKL117_RS05790	PF00005	ABC transporter
HPAKL117_RS05795	PF01255	Putative undecaprenyl diphosphate synthase
HPAKL117_RS05815	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
HPAKL117_RS05820	PF04055	Radical SAM superfamily
HPAKL117_RS05825	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
HPAKL117_RS05830	PF00293	NUDIX domain
HPAKL117_RS05835	PF13840	ACT domain 
HPAKL117_RS05835	PF00696	Amino acid kinase family
HPAKL117_RS05835	PF01842	ACT domain
HPAKL117_RS05845	PF12169	DNA polymerase III subunits gamma and tau domain III
HPAKL117_RS05850	PF00809	Pterin binding enzyme
HPAKL117_RS05860	PF00892	EamA-like transporter family
HPAKL117_RS05875	PF00117	Glutamine amidotransferase class-I
HPAKL117_RS05875	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
HPAKL117_RS05880	PF00795	Carbon-nitrogen hydrolase
HPAKL117_RS05890	PF02545	Maf-like protein
HPAKL117_RS05895	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
HPAKL117_RS05895	PF02272	DHHA1 domain
HPAKL117_RS05895	PF01411	tRNA synthetases class II (A)
HPAKL117_RS05910	PF01084	Ribosomal protein S18
HPAKL117_RS05915	PF00436	Single-strand binding protein family
HPAKL117_RS05920	PF01250	Ribosomal protein S6
HPAKL117_RS05925	PF06144	DNA polymerase III, delta subunit
HPAKL117_RS05930	PF00773	RNB domain
HPAKL117_RS05935	PF08501	Shikimate dehydrogenase substrate binding domain
HPAKL117_RS05945	PF00528	Binding-protein-dependent transport system inner membrane component
HPAKL117_RS05950	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
HPAKL117_RS05955	PF00579	tRNA synthetases class I (W and Y)
HPAKL117_RS05965	PF03840	Preprotein translocase SecG subunit
HPAKL117_RS05970	PF01765	Ribosome recycling factor
HPAKL117_RS05975	PF00156	Phosphoribosyl transferase domain
HPAKL117_RS05985	PF02146	Sir2 family
HPAKL117_RS05990	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
HPAKL117_RS05995	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
HPAKL117_RS06000	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
HPAKL117_RS06005	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
HPAKL117_RS06020	PF12838	4Fe-4S dicluster domain
HPAKL117_RS06020	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
HPAKL117_RS06020	PF01568	Molydopterin dinucleotide binding domain
HPAKL117_RS06020	PF00384	Molybdopterin oxidoreductase
HPAKL117_RS06020	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
HPAKL117_RS06025	PF00146	NADH dehydrogenase
HPAKL117_RS06030	PF12838	4Fe-4S dicluster domain
HPAKL117_RS06035	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
HPAKL117_RS06040	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
HPAKL117_RS06045	PF00361	Proton-conducting membrane transporter
HPAKL117_RS06045	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
HPAKL117_RS06050	PF01059	NADH-ubiquinone oxidoreductase chain 4, amino terminus
HPAKL117_RS06050	PF00361	Proton-conducting membrane transporter
HPAKL117_RS06055	PF00361	Proton-conducting membrane transporter
HPAKL117_RS06065	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
HPAKL117_RS06065	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
HPAKL117_RS06065	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
HPAKL117_RS06065	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
HPAKL117_RS06075	PF00290	Tryptophan synthase alpha chain
HPAKL117_RS06080	PF00291	Pyridoxal-phosphate dependent enzyme
HPAKL117_RS06085	PF00218	Indole-3-glycerol phosphate synthase
HPAKL117_RS06085	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
HPAKL117_RS06090	PF00591	Glycosyl transferase family, a/b domain
HPAKL117_RS06090	PF02885	Glycosyl transferase family, helical bundle domain
HPAKL117_RS06095	PF00117	Glutamine amidotransferase class-I
HPAKL117_RS06100	PF04715	Anthranilate synthase component I, N terminal region
HPAKL117_RS06100	PF00425	chorismate binding enzyme
HPAKL117_RS06105	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
HPAKL117_RS06115	PF04264	YceI-like domain
HPAKL117_RS06120	PF03070	TENA/THI-4/PQQC family
HPAKL117_RS06125	PF04973	Nicotinamide mononucleotide transporter
HPAKL117_RS06135	PF01196	Ribosomal protein L17
HPAKL117_RS06140	PF01000	RNA polymerase Rpb3/RpoA insert domain
HPAKL117_RS06140	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
HPAKL117_RS06140	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
HPAKL117_RS06145	PF01479	S4 domain
HPAKL117_RS06145	PF00163	Ribosomal protein S4/S9 N-terminal domain
HPAKL117_RS06150	PF00411	Ribosomal protein S11
HPAKL117_RS06155	PF00416	Ribosomal protein S13/S18
HPAKL117_RS06160	PF00444	Ribosomal protein L36
HPAKL117_RS06165	PF01176	Translation initiation factor 1A / IF-1
HPAKL117_RS06170	PF00557	Metallopeptidase family M24
HPAKL117_RS06175	PF00344	SecY translocase
HPAKL117_RS06180	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
HPAKL117_RS06185	PF00333	Ribosomal protein S5, N-terminal domain
HPAKL117_RS06185	PF03719	Ribosomal protein S5, C-terminal domain
HPAKL117_RS06190	PF00861	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
HPAKL117_RS06195	PF00347	Ribosomal protein L6
HPAKL117_RS06200	PF00410	Ribosomal protein S8
HPAKL117_RS06205	PF00253	Ribosomal protein S14p/S29e
HPAKL117_RS06210	PF00281	Ribosomal protein L5
HPAKL117_RS06210	PF00673	ribosomal L5P family C-terminus
HPAKL117_RS06215	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24
HPAKL117_RS06215	PF00467	KOW motif
HPAKL117_RS06220	PF00238	Ribosomal protein L14p/L23e
HPAKL117_RS06225	PF00366	Ribosomal protein S17
HPAKL117_RS06230	PF00831	Ribosomal L29 protein
HPAKL117_RS06235	PF00252	Ribosomal protein L16p/L10e
HPAKL117_RS06240	PF00189	Ribosomal protein S3, C-terminal domain
HPAKL117_RS06240	PF07650	KH domain
HPAKL117_RS06245	PF00237	Ribosomal protein L22p/L17e
HPAKL117_RS06250	PF00203	Ribosomal protein S19
HPAKL117_RS06255	PF03947	Ribosomal Proteins L2, C-terminal domain
HPAKL117_RS06255	PF00181	Ribosomal Proteins L2, RNA binding domain
HPAKL117_RS06260	PF00276	Ribosomal protein L23
HPAKL117_RS06265	PF00573	Ribosomal protein L4/L1 family
HPAKL117_RS06270	PF00297	Ribosomal protein L3
HPAKL117_RS06275	PF00338	Ribosomal protein S10p/S20e
HPAKL117_RS06290	PF01351	Ribonuclease HII
HPAKL117_RS06300	PF00206	Lyase
HPAKL117_RS06300	PF10415	Fumarase C C-terminus
HPAKL117_RS06320	PF00873	AcrB/AcrD/AcrF family
HPAKL117_RS06325	PF05437	Branched-chain amino acid transport protein (AzlD)
HPAKL117_RS06330	PF03591	AzlC protein
HPAKL117_RS06335	PF00684	DnaJ central domain
HPAKL117_RS06335	PF00226	DnaJ domain
HPAKL117_RS06335	PF01556	DnaJ C terminal domain
HPAKL117_RS06355	PF01467	Cytidylyltransferase-like
HPAKL117_RS06360	PF08753	NikR C terminal nickel binding domain
HPAKL117_RS06360	PF01402	Ribbon-helix-helix protein, copG family
HPAKL117_RS06365	PF01618	MotA/TolQ/ExbB proton channel family
HPAKL117_RS06370	PF02472	Biopolymer transport protein ExbD/TolR
HPAKL117_RS06375	PF03544	Gram-negative bacterial TonB protein C-terminal
HPAKL117_RS06385	PF03741	Integral membrane protein TerC family
HPAKL117_RS06390	PF01544	CorA-like Mg2+ transporter protein
HPAKL117_RS06395	PF00162	Phosphoglycerate kinase
HPAKL117_RS06400	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
HPAKL117_RS06400	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
HPAKL117_RS06405	PF03167	Uracil DNA glycosylase superfamily
HPAKL117_RS06410	PF01553	Acyltransferase
HPAKL117_RS06420	PF13180	PDZ domain
HPAKL117_RS06420	PF03572	Peptidase family S41
HPAKL117_RS06430	PF18755	Restriction Enzyme Adenine Methylase Associated
HPAKL117_RS06430	PF01555	DNA methylase
HPAKL117_RS06445	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
HPAKL117_RS06445	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
HPAKL117_RS06450	PF02445	Quinolinate synthetase A protein
HPAKL117_RS06455	PF02666	Phosphatidylserine decarboxylase
HPAKL117_RS06470	PF01040	UbiA prenyltransferase family
HPAKL117_RS06480	PF00772	DnaB-like helicase N terminal domain
HPAKL117_RS06480	PF03796	DnaB-like helicase C terminal domain
HPAKL117_RS06485	PF01256	Carbohydrate kinase
HPAKL117_RS06485	PF03853	YjeF-related protein N-terminus
HPAKL117_RS06490	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HPAKL117_RS06495	PF00072	Response regulator receiver domain
HPAKL117_RS06495	PF00486	Transcriptional regulatory protein, C terminal
HPAKL117_RS06505	PF01555	DNA methylase
HPAKL117_RS06510	PF18755	Restriction Enzyme Adenine Methylase Associated
HPAKL117_RS06510	PF01555	DNA methylase
HPAKL117_RS06540	PF07724	AAA domain (Cdc48 subfamily)
HPAKL117_RS06540	PF10431	C-terminal, D2-small domain, of ClpB protein 
HPAKL117_RS06545	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2
HPAKL117_RS06545	PF00132	Bacterial transferase hexapeptide (six repeats)
HPAKL117_RS06550	PF07977	FabA-like domain
HPAKL117_RS06555	PF02623	FliW protein
HPAKL117_RS06560	PF13525	Outer membrane lipoprotein
HPAKL117_RS06565	PF02190	ATP-dependent protease La (LON) substrate-binding domain 
HPAKL117_RS06565	PF05362	Lon protease (S16) C-terminal proteolytic domain
HPAKL117_RS06565	PF00004	ATPase family associated with various cellular activities (AAA)
HPAKL117_RS06570	PF01842	ACT domain
HPAKL117_RS06570	PF02153	Prephenate dehydrogenase
HPAKL117_RS06610	PF15738	Bacterial toxin of type II toxin-antitoxin system, YafQ 
HPAKL117_RS06615	PF02534	Type IV secretory system Conjugative DNA transfer
HPAKL117_RS06635	PF00437	Type II/IV secretion system protein
HPAKL117_RS06670	PF01751	Toprim domain
HPAKL117_RS06670	PF01131	DNA topoisomerase
HPAKL117_RS06675	PF03135	CagE, TrbE, VirB family, component of type IV transporter system
HPAKL117_RS06735	PF14489	QueF-like protein
HPAKL117_RS06755	PF13651	Adenine-specific methyltransferase EcoRI
HPAKL117_RS06760	PF02963	Restriction endonuclease EcoRI
HPAKL117_RS06765	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
HPAKL117_RS06770	PF01313	Bacterial export proteins, family 3
HPAKL117_RS06775	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
HPAKL117_RS06775	PF18269	T3SS EscN ATPase C-terminal domain
HPAKL117_RS06780	PF00437	Type II/IV secretion system protein
HPAKL117_RS06785	PF00133	tRNA synthetases class I (I, L, M and V)
HPAKL117_RS06785	PF08264	Anticodon-binding domain of tRNA
HPAKL117_RS06790	PF01479	S4 domain
HPAKL117_RS06805	PF04055	Radical SAM superfamily
HPAKL117_RS06810	PF00571	CBS domain
HPAKL117_RS06810	PF01380	SIS domain
HPAKL117_RS06815	PF17770	Ribonuclease J C-terminal domain
HPAKL117_RS06815	PF00753	Metallo-beta-lactamase superfamily
HPAKL117_RS06815	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
HPAKL117_RS06820	PF00398	Ribosomal RNA adenine dimethylase
HPAKL117_RS06835	PF01842	ACT domain
HPAKL117_RS06835	PF00551	Formyl transferase
HPAKL117_RS06840	PF01343	Peptidase family S49
HPAKL117_RS06880	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
HPAKL117_RS06885	PF02599	Global regulator protein family
HPAKL117_RS06890	PF00288	GHMP kinases N terminal domain
HPAKL117_RS06895	PF01668	SmpB protein
HPAKL117_RS06900	PF01618	MotA/TolQ/ExbB proton channel family
HPAKL117_RS06905	PF02472	Biopolymer transport protein ExbD/TolR
HPAKL117_RS06910	PF00468	Ribosomal protein L34
HPAKL117_RS06915	PF00825	Ribonuclease P
HPAKL117_RS06920	PF01809	Putative membrane protein insertion efficiency factor
HPAKL117_RS06925	PF14849	YidC periplasmic domain
HPAKL117_RS06925	PF02096	60Kd inner membrane protein
HPAKL117_RS06935	PF12631	MnmE helical domain
HPAKL117_RS06935	PF10396	GTP-binding protein TrmE N-terminus
HPAKL117_RS06935	PF01926	50S ribosome-binding GTPase
HPAKL117_RS06955	PF02169	LPP20 lipoprotein
HPAKL117_RS06965	PF00085	Thioredoxin
HPAKL117_RS06970	PF00849	RNA pseudouridylate synthase
HPAKL117_RS06970	PF01479	S4 domain
HPAKL117_RS06975	PF07733	Bacterial DNA polymerase III alpha NTPase domain
HPAKL117_RS06975	PF02811	PHP domain
HPAKL117_RS06975	PF14579	Helix-hairpin-helix motif
HPAKL117_RS06975	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
HPAKL117_RS06980	PF03150	Di-haem cytochrome c peroxidase
HPAKL117_RS06980	PF00034	Cytochrome c
HPAKL117_RS07000	PF00005	ABC transporter
HPAKL117_RS07000	PF09383	NIL domain
HPAKL117_RS07005	PF02405	Permease MlaE
HPAKL117_RS07015	PF01063	Amino-transferase class IV
HPAKL117_RS07025	PF00476	DNA polymerase family A
HPAKL117_RS07025	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
HPAKL117_RS07025	PF01367	5'-3' exonuclease, C-terminal SAM fold
HPAKL117_RS07035	PF02384	N-6 DNA Methylase
HPAKL117_RS07045	PF02223	Thymidylate kinase
HPAKL117_RS07050	PF01467	Cytidylyltransferase-like
HPAKL117_RS07055	PF02441	Flavoprotein
HPAKL117_RS07065	PF00580	UvrD/REP helicase N-terminal domain
HPAKL117_RS07065	PF13361	UvrD-like helicase C-terminal domain
HPAKL117_RS07075	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
HPAKL117_RS07075	PF02403	Seryl-tRNA synthetase N-terminal domain
HPAKL117_RS07085	PF02609	Exonuclease VII small subunit
HPAKL117_RS07090	PF01209	ubiE/COQ5 methyltransferase family
HPAKL117_RS07095	PF03653	Uncharacterised protein family (UPF0093)
HPAKL117_RS07100	PF09186	Domain of unknown function (DUF1949)
HPAKL117_RS07100	PF01205	Uncharacterized protein family UPF0029
HPAKL117_RS07115	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
HPAKL117_RS07125	PF01595	Cyclin M transmembrane N-terminal domain
HPAKL117_RS07125	PF00571	CBS domain
HPAKL117_RS07125	PF03471	Transporter associated domain
HPAKL117_RS07130	PF01384	Phosphate transporter family
HPAKL117_RS07135	PF01106	NifU-like domain
HPAKL117_RS07145	PF08245	Mur ligase middle domain
HPAKL117_RS07145	PF02875	Mur ligase family, glutamate ligase domain
HPAKL117_RS07150	PF00923	Transaldolase/Fructose-6-phosphate aldolase
HPAKL117_RS07155	PF01386	Ribosomal L25p family
HPAKL117_RS07155	PF14693	Ribosomal protein TL5, C-terminal domain
HPAKL117_RS07160	PF01195	Peptidyl-tRNA hydrolase
HPAKL117_RS07170	PF02086	D12 class N6 adenine-specific DNA methyltransferase
HPAKL117_RS07175	PF02086	D12 class N6 adenine-specific DNA methyltransferase
HPAKL117_RS07200	PF00403	Heavy-metal-associated domain
HPAKL117_RS07205	PF05175	Methyltransferase small domain
HPAKL117_RS07210	PF01872	RibD C-terminal domain
HPAKL117_RS07210	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
HPAKL117_RS07215	PF03616	Sodium/glutamate symporter
HPAKL117_RS07220	PF16653	Saccharopine dehydrogenase C-terminal domain
HPAKL117_RS07220	PF03435	Saccharopine dehydrogenase NADP binding domain
HPAKL117_RS07225	PF12801	4Fe-4S binding domain
HPAKL117_RS07225	PF11614	IG-like fold at C-terminal of FixG, putative oxidoreductase
HPAKL117_RS07225	PF13746	4Fe-4S dicluster domain
HPAKL117_RS07230	PF02660	Glycerol-3-phosphate acyltransferase
HPAKL117_RS07250	PF03841	L-seryl-tRNA selenium transferase
HPAKL117_RS07255	PF08529	NusA N-terminal domain
HPAKL117_RS07255	PF13184	NusA-like KH domain
HPAKL117_RS07270	PF04851	Type III restriction enzyme, res subunit
HPAKL117_RS07270	PF00271	Helicase conserved C-terminal domain
HPAKL117_RS07285	PF03372	Endonuclease/Exonuclease/phosphatase family
HPAKL117_RS07305	PF08299	Bacterial dnaA protein helix-turn-helix
HPAKL117_RS07305	PF00308	Bacterial dnaA  protein
HPAKL117_RS07315	PF10398	Protein of unknown function (DUF2443)
HPAKL117_RS07320	PF01380	SIS domain
HPAKL117_RS07325	PF02511	Thymidylate synthase complementing protein
HPAKL117_RS07330	PF01420	Type I restriction modification DNA specificity domain
HPAKL117_RS07340	PF11867	Domain of unknown function (DUF3387)
HPAKL117_RS07340	PF18766	SWI2/SNF2 ATPase
HPAKL117_RS07340	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
HPAKL117_RS07350	PF07660	Secretin and TonB N terminus short domain
HPAKL117_RS07350	PF07715	TonB-dependent Receptor Plug Domain
HPAKL117_RS07350	PF00593	TonB dependent receptor
HPAKL117_RS07355	PF00491	Arginase family
HPAKL117_RS07360	PF00324	Amino acid permease
HPAKL117_RS07365	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
HPAKL117_RS07365	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
HPAKL117_RS07380	PF01513	ATP-NAD kinase
HPAKL117_RS07385	PF02463	RecF/RecN/SMC N terminal domain
HPAKL117_RS07390	PF05670	NFACT protein RNA binding domain
HPAKL117_RS07435	PF00316	Fructose-1-6-bisphosphatase, N-terminal domain
HPAKL117_RS07440	PF00834	Ribulose-phosphate 3 epimerase family
HPAKL117_RS07445	PF02811	PHP domain
HPAKL117_RS07445	PF14579	Helix-hairpin-helix motif
HPAKL117_RS07445	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
HPAKL117_RS07445	PF07733	Bacterial DNA polymerase III alpha NTPase domain
HPAKL117_RS07445	PF00929	Exonuclease
HPAKL117_RS07480	PF00589	Phage integrase family
HPAKL117_RS07480	PF18644	Phage integrase SAM-like domain
HPAKL117_RS07485	PF03631	Virulence factor BrkB
HPAKL117_RS07490	PF04055	Radical SAM superfamily
HPAKL117_RS07490	PF06968	Biotin and Thiamin Synthesis associated domain
HPAKL117_RS07515	PF00889	Elongation factor TS
HPAKL117_RS07520	PF00318	Ribosomal protein S2
HPAKL117_RS07525	PF13361	UvrD-like helicase C-terminal domain
HPAKL117_RS07525	PF12705	PD-(D/E)XK nuclease superfamily
HPAKL117_RS07525	PF00580	UvrD/REP helicase N-terminal domain
HPAKL117_RS07530	PF06965	Na+/H+ antiporter 1
HPAKL117_RS07535	PF02699	Preprotein translocase subunit
HPAKL117_RS07540	PF02355	Protein export membrane protein
HPAKL117_RS07545	PF02355	Protein export membrane protein
HPAKL117_RS07545	PF07549	SecD/SecF GG Motif
HPAKL117_RS07555	PF00133	tRNA synthetases class I (I, L, M and V)
HPAKL117_RS07555	PF13603	Leucyl-tRNA synthetase, Domain 2
HPAKL117_RS07555	PF09334	tRNA synthetases class I (M)
HPAKL117_RS07565	PF02875	Mur ligase family, glutamate ligase domain
HPAKL117_RS07565	PF08245	Mur ligase middle domain
HPAKL117_RS07575	PF04225	Opacity-associated protein A LysM-like domain
HPAKL117_RS07575	PF01551	Peptidase family M23
HPAKL117_RS07585	PF00271	Helicase conserved C-terminal domain
HPAKL117_RS07585	PF03461	TRCF domain
HPAKL117_RS07585	PF02559	CarD-like/TRCF domain
HPAKL117_RS07585	PF17757	UvrB interaction domain
HPAKL117_RS07585	PF00270	DEAD/DEAH box helicase
HPAKL117_RS07590	PF00355	Rieske [2Fe-2S] domain
HPAKL117_RS07590	PF10399	Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal
HPAKL117_RS07595	PF00033	Cytochrome b/b6/petB
HPAKL117_RS07595	PF00032	Cytochrome b(C-terminal)/b6/petD
HPAKL117_RS07610	PF03717	Penicillin-binding Protein dimerisation domain
HPAKL117_RS07610	PF00905	Penicillin binding protein transpeptidase domain
HPAKL117_RS07615	PF02049	Flagellar hook-basal body complex protein FliE
HPAKL117_RS07620	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
HPAKL117_RS07620	PF00460	Flagella basal body rod protein
HPAKL117_RS07625	PF00460	Flagella basal body rod protein
HPAKL117_RS07630	PF01098	Cell cycle protein
HPAKL117_RS07640	PF00578	AhpC/TSA family
HPAKL117_RS07640	PF10417	C-terminal domain of 1-Cys peroxiredoxin
HPAKL117_RS07645	PF03180	NLPA lipoprotein
HPAKL117_RS07650	PF00905	Penicillin binding protein transpeptidase domain
HPAKL117_RS07650	PF03717	Penicillin-binding Protein dimerisation domain
HPAKL117_RS07660	PF01926	50S ribosome-binding GTPase
HPAKL117_RS07680	PF03330	Lytic transglycolase
HPAKL117_RS07680	PF05036	Sporulation related domain
HPAKL117_RS07685	PF01476	LysM domain
HPAKL117_RS07685	PF01464	Transglycosylase SLT domain
HPAKL117_RS07690	PF01026	TatD related DNase
HPAKL117_RS07695	PF00677	Lumazine binding domain
HPAKL117_RS07705	PF00005	ABC transporter
HPAKL117_RS07705	PF09383	NIL domain
HPAKL117_RS07710	PF00528	Binding-protein-dependent transport system inner membrane component
HPAKL117_RS07725	PF01569	PAP2 superfamily
HPAKL117_RS07730	PF00953	Glycosyl transferase family 4
HPAKL117_RS07735	PF03740	Pyridoxal phosphate biosynthesis protein PdxJ
HPAKL117_RS07740	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
HPAKL117_RS07745	PF00814	Glycoprotease family
HPAKL117_RS07750	PF00460	Flagella basal body rod protein
HPAKL117_RS07750	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
HPAKL117_RS07765	PF03981	Ubiquinol-cytochrome C chaperone 
HPAKL117_RS07765	PF13099	Domain of unknown function (DUF3944)
HPAKL117_RS07770	PF03981	Ubiquinol-cytochrome C chaperone 
HPAKL117_RS07770	PF13099	Domain of unknown function (DUF3944)
