locus-tag class description U064_RS00005 PF01029 NusB family U064_RS00010 PF00885 6,7-dimethyl-8-ribityllumazine synthase U064_RS00015 PF00793 DAHP synthetase I family U064_RS00020 PF00484 Carbonic anhydrase U064_RS00025 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family U064_RS00030 PF02569 Pantoate-beta-alanine ligase U064_RS00065 PF00118 TCP-1/cpn60 chaperonin family U064_RS00070 PF00166 Chaperonin 10 Kd subunit U064_RS00075 PF13662 Toprim domain U064_RS00075 PF16730 DnaG-primase C-terminal, helicase-binding domain U064_RS00075 PF01807 CHC2 zinc finger U064_RS00075 PF08275 DNA primase catalytic core, N-terminal domain U064_RS00110 PF00072 Response regulator receiver domain U064_RS00110 PF01584 CheW-like domain U064_RS00115 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain U064_RS00120 PF01569 PAP2 superfamily U064_RS00125 PF08019 Phosphoethanolamine transferase EptA/EptB U064_RS00125 PF00884 Sulfatase U064_RS00135 PF00285 Citrate synthase, C-terminal domain U064_RS00140 PF00180 Isocitrate/isopropylmalate dehydrogenase U064_RS00145 PF07509 Protein of unknown function (DUF1523) U064_RS00160 PF00582 Universal stress protein family U064_RS00165 PF02617 ATP-dependent Clp protease adaptor protein ClpS U064_RS00170 PF17871 AAA lid domain U064_RS00170 PF07724 AAA domain (Cdc48 subfamily) U064_RS00170 PF00004 ATPase family associated with various cellular activities (AAA) U064_RS00170 PF02861 Clp amino terminal domain, pathogenicity island component U064_RS00170 PF10431 C-terminal, D2-small domain, of ClpB protein U064_RS00175 PF02261 Aspartate decarboxylase U064_RS00180 PF02575 YbaB/EbfC DNA-binding family U064_RS00215 PF00483 Nucleotidyl transferase U064_RS00215 PF01050 Mannose-6-phosphate isomerase U064_RS00220 PF16363 GDP-mannose 4,6 dehydratase U064_RS00225 PF01370 NAD dependent epimerase/dehydratase family U064_RS00240 PF02769 AIR synthase related protein, C-terminal domain U064_RS00240 PF00586 AIR synthase related protein, N-terminal domain U064_RS00245 PF17788 HypF Kae1-like domain U064_RS00245 PF00708 Acylphosphatase U064_RS00245 PF01300 Telomere recombination U064_RS00245 PF07503 HypF finger U064_RS00250 PF04371 Porphyromonas-type peptidyl-arginine deiminase U064_RS00255 PF01555 DNA methylase U064_RS00260 PF00145 C-5 cytosine-specific DNA methylase U064_RS00260 PF12728 Helix-turn-helix domain U064_RS00275 PF00474 Sodium:solute symporter family U064_RS00295 PF01555 DNA methylase U064_RS00295 PF18755 Restriction Enzyme Adenine Methylase Associated U064_RS00310 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain U064_RS00310 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain U064_RS00315 PF02445 Quinolinate synthetase A protein U064_RS00320 PF02666 Phosphatidylserine decarboxylase U064_RS00335 PF01040 UbiA prenyltransferase family U064_RS00345 PF00772 DnaB-like helicase N terminal domain U064_RS00345 PF03796 DnaB-like helicase C terminal domain U064_RS00350 PF03853 YjeF-related protein N-terminus U064_RS00350 PF01256 Carbohydrate kinase U064_RS00355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U064_RS00360 PF00072 Response regulator receiver domain U064_RS00360 PF00486 Transcriptional regulatory protein, C terminal U064_RS00365 PF01555 DNA methylase U064_RS00385 PF07724 AAA domain (Cdc48 subfamily) U064_RS00385 PF10431 C-terminal, D2-small domain, of ClpB protein U064_RS00390 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 U064_RS00390 PF00132 Bacterial transferase hexapeptide (six repeats) U064_RS00395 PF07977 FabA-like domain U064_RS00400 PF02623 FliW protein U064_RS00405 PF13525 Outer membrane lipoprotein U064_RS00410 PF02190 ATP-dependent protease La (LON) substrate-binding domain U064_RS00410 PF00004 ATPase family associated with various cellular activities (AAA) U064_RS00410 PF05362 Lon protease (S16) C-terminal proteolytic domain U064_RS00415 PF02153 Prephenate dehydrogenase U064_RS00415 PF01842 ACT domain U064_RS00425 PF01555 DNA methylase U064_RS00430 PF04851 Type III restriction enzyme, res subunit U064_RS00435 PF06968 Biotin and Thiamin Synthesis associated domain U064_RS00435 PF04055 Radical SAM superfamily U064_RS00440 PF03631 Virulence factor BrkB U064_RS00490 PF07282 Putative transposase DNA-binding domain U064_RS00490 PF01385 Probable transposase U064_RS00490 PF12323 Helix-turn-helix domain U064_RS00500 PF14489 QueF-like protein U064_RS00525 PF01555 DNA methylase U064_RS00530 PF04371 Porphyromonas-type peptidyl-arginine deiminase U064_RS00545 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain U064_RS00545 PF00117 Glutamine amidotransferase class-I U064_RS00560 PF00892 EamA-like transporter family U064_RS00570 PF00809 Pterin binding enzyme U064_RS00575 PF12169 DNA polymerase III subunits gamma and tau domain III U064_RS00585 PF00696 Amino acid kinase family U064_RS00585 PF13840 ACT domain U064_RS00585 PF01842 ACT domain U064_RS00590 PF00293 NUDIX domain U064_RS00595 PF13442 Cytochrome C oxidase, cbb3-type, subunit III U064_RS00600 PF04055 Radical SAM superfamily U064_RS00605 PF02537 CrcB-like protein, Camphor Resistance (CrcB) U064_RS00625 PF01255 Putative undecaprenyl diphosphate synthase U064_RS00630 PF00005 ABC transporter U064_RS00640 PF02843 Phosphoribosylglycinamide synthetase, C domain U064_RS00640 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain U064_RS00640 PF02844 Phosphoribosylglycinamide synthetase, N domain U064_RS00650 PF03968 OstA-like protein U064_RS00650 PF04453 LPS transport system D U064_RS00660 PF00575 S1 RNA binding domain U064_RS00660 PF01138 3' exoribonuclease family, domain 1 U064_RS00660 PF00013 KH domain U064_RS00660 PF03725 3' exoribonuclease family, domain 2 U064_RS00665 PF00137 ATP synthase subunit C U064_RS00680 PF00132 Bacterial transferase hexapeptide (six repeats) U064_RS00690 PF02086 D12 class N6 adenine-specific DNA methyltransferase U064_RS00700 PF00664 ABC transporter transmembrane region U064_RS00700 PF00005 ABC transporter U064_RS00725 PF03143 Elongation factor Tu C-terminal domain U064_RS00725 PF03144 Elongation factor Tu domain 2 U064_RS00725 PF00009 Elongation factor Tu GTP binding domain U064_RS00730 PF00471 Ribosomal protein L33 U064_RS00745 PF02357 Transcription termination factor nusG U064_RS00750 PF03946 Ribosomal protein L11, N-terminal domain U064_RS00750 PF00298 Ribosomal protein L11, RNA binding domain U064_RS00755 PF00687 Ribosomal protein L1p/L10e family U064_RS00760 PF00466 Ribosomal protein L10 U064_RS00765 PF00542 Ribosomal protein L7/L12 C-terminal domain U064_RS00765 PF16320 Ribosomal protein L7/L12 dimerisation domain U064_RS00775 PF04997 RNA polymerase Rpb1, domain 1 U064_RS00775 PF00623 RNA polymerase Rpb1, domain 2 U064_RS00775 PF04983 RNA polymerase Rpb1, domain 3 U064_RS00775 PF05000 RNA polymerase Rpb1, domain 4 U064_RS00775 PF04998 RNA polymerase Rpb1, domain 5 U064_RS00775 PF04563 RNA polymerase beta subunit U064_RS00775 PF04565 RNA polymerase Rpb2, domain 3 U064_RS00775 PF04561 RNA polymerase Rpb2, domain 2 U064_RS00775 PF10385 RNA polymerase beta subunit external 1 domain U064_RS00775 PF00562 RNA polymerase Rpb2, domain 6 U064_RS00775 PF04560 RNA polymerase Rpb2, domain 7 U064_RS00780 PF00164 Ribosomal protein S12/S23 U064_RS00785 PF00177 Ribosomal protein S7p/S5e U064_RS00790 PF03144 Elongation factor Tu domain 2 U064_RS00790 PF00679 Elongation factor G C-terminus U064_RS00790 PF14492 Elongation Factor G, domain II U064_RS00790 PF00009 Elongation factor Tu GTP binding domain U064_RS00790 PF03764 Elongation factor G, domain IV U064_RS00800 PF01075 Glycosyltransferase family 9 (heptosyltransferase) U064_RS00805 PF13393 Histidyl-tRNA synthetase U064_RS00805 PF03129 Anticodon binding domain U064_RS00810 PF01118 Semialdehyde dehydrogenase, NAD binding domain U064_RS00810 PF02774 Semialdehyde dehydrogenase, dimerisation domain U064_RS00825 PF00194 Eukaryotic-type carbonic anhydrase U064_RS00830 PF07690 Major Facilitator Superfamily U064_RS00840 PF02080 TrkA-C domain U064_RS00840 PF00999 Sodium/hydrogen exchanger family U064_RS00840 PF02254 TrkA-N domain U064_RS00845 PF01171 PP-loop family U064_RS00850 PF07690 Major Facilitator Superfamily U064_RS00860 PF01773 Na+ dependent nucleoside transporter N-terminus U064_RS00860 PF07662 Na+ dependent nucleoside transporter C-terminus U064_RS00865 PF01676 Metalloenzyme superfamily U064_RS00870 PF01048 Phosphorylase superfamily U064_RS00885 PF00860 Permease family U064_RS00890 PF07690 Major Facilitator Superfamily U064_RS00905 PF00005 ABC transporter U064_RS00910 PF00528 Binding-protein-dependent transport system inner membrane component U064_RS00915 PF00528 Binding-protein-dependent transport system inner membrane component U064_RS00920 PF13722 5TM C-terminal transporter carbon starvation CstA U064_RS00920 PF02554 Carbon starvation protein CstA U064_RS00930 PF00342 Phosphoglucose isomerase U064_RS00940 PF07992 Pyridine nucleotide-disulphide oxidoreductase U064_RS00955 PF00258 Flavodoxin U064_RS00960 PF02130 Uncharacterized protein family UPF0054 U064_RS00965 PF02661 Fic/DOC family U064_RS00970 PF14748 Pyrroline-5-carboxylate reductase dimerisation U064_RS00970 PF03807 NADP oxidoreductase coenzyme F420-dependent U064_RS00985 PF04101 Glycosyltransferase family 28 C-terminal domain U064_RS00985 PF03033 Glycosyltransferase family 28 N-terminal domain U064_RS00990 PF02623 FliW protein U064_RS00995 PF08264 Anticodon-binding domain of tRNA U064_RS00995 PF10458 Valyl tRNA synthetase tRNA binding arm U064_RS00995 PF00133 tRNA synthetases class I (I, L, M and V) U064_RS01000 PF02881 SRP54-type protein, helical bundle domain U064_RS01000 PF00448 SRP54-type protein, GTPase domain U064_RS01000 PF02978 Signal peptide binding domain U064_RS01005 PF00886 Ribosomal protein S16 U064_RS01015 PF05239 PRC-barrel domain U064_RS01015 PF01782 RimM N-terminal domain U064_RS01020 PF01746 tRNA (Guanine-1)-methyltransferase U064_RS01025 PF01245 Ribosomal protein L19 U064_RS01065 PF01385 Probable transposase U064_RS01065 PF07282 Putative transposase DNA-binding domain U064_RS01065 PF12323 Helix-turn-helix domain U064_RS01110 PF07804 HipA-like C-terminal domain U064_RS01115 PF00589 Phage integrase family U064_RS01115 PF02899 Phage integrase, N-terminal SAM-like domain U064_RS01140 PF01131 DNA topoisomerase U064_RS01140 PF01751 Toprim domain U064_RS01140 PF01396 Topoisomerase DNA binding C4 zinc finger U064_RS01150 PF01385 Probable transposase U064_RS01150 PF07282 Putative transposase DNA-binding domain U064_RS01150 PF12323 Helix-turn-helix domain U064_RS01200 PF00551 Formyl transferase U064_RS01200 PF01842 ACT domain U064_RS01215 PF00398 Ribosomal RNA adenine dimethylase U064_RS01220 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain U064_RS01220 PF00753 Metallo-beta-lactamase superfamily U064_RS01220 PF17770 Ribonuclease J C-terminal domain U064_RS01225 PF01380 SIS domain U064_RS01225 PF00571 CBS domain U064_RS01230 PF04055 Radical SAM superfamily U064_RS01245 PF01479 S4 domain U064_RS01250 PF00133 tRNA synthetases class I (I, L, M and V) U064_RS01250 PF08264 Anticodon-binding domain of tRNA U064_RS01255 PF00437 Type II/IV secretion system protein U064_RS01260 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain U064_RS01260 PF18269 T3SS EscN ATPase C-terminal domain U064_RS01265 PF01313 Bacterial export proteins, family 3 U064_RS01270 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain U064_RS01290 PF13180 PDZ domain U064_RS01290 PF03572 Peptidase family S41 U064_RS01300 PF01553 Acyltransferase U064_RS01305 PF03167 Uracil DNA glycosylase superfamily U064_RS01310 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain U064_RS01310 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain U064_RS01315 PF00162 Phosphoglycerate kinase U064_RS01320 PF01544 CorA-like Mg2+ transporter protein U064_RS01325 PF03741 Integral membrane protein TerC family U064_RS01340 PF03544 Gram-negative bacterial TonB protein C-terminal U064_RS01345 PF02472 Biopolymer transport protein ExbD/TolR U064_RS01350 PF01618 MotA/TolQ/ExbB proton channel family U064_RS01355 PF01402 Ribbon-helix-helix protein, copG family U064_RS01355 PF08753 NikR C terminal nickel binding domain U064_RS01360 PF01467 Cytidylyltransferase-like U064_RS01380 PF00684 DnaJ central domain U064_RS01380 PF01556 DnaJ C terminal domain U064_RS01380 PF00226 DnaJ domain U064_RS01385 PF03591 AzlC protein U064_RS01390 PF05437 Branched-chain amino acid transport protein (AzlD) U064_RS01395 PF00873 AcrB/AcrD/AcrF family U064_RS01400 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion U064_RS01400 PF00529 HlyD membrane-fusion protein of T1SS U064_RS01415 PF10415 Fumarase C C-terminus U064_RS01415 PF00206 Lyase U064_RS01425 PF01351 Ribonuclease HII U064_RS01440 PF00338 Ribosomal protein S10p/S20e U064_RS01445 PF00297 Ribosomal protein L3 U064_RS01450 PF00573 Ribosomal protein L4/L1 family U064_RS01455 PF00276 Ribosomal protein L23 U064_RS01460 PF00181 Ribosomal Proteins L2, RNA binding domain U064_RS01460 PF03947 Ribosomal Proteins L2, C-terminal domain U064_RS01465 PF00203 Ribosomal protein S19 U064_RS01470 PF00237 Ribosomal protein L22p/L17e U064_RS01475 PF07650 KH domain U064_RS01475 PF00189 Ribosomal protein S3, C-terminal domain U064_RS01480 PF00252 Ribosomal protein L16p/L10e U064_RS01485 PF00831 Ribosomal L29 protein U064_RS01490 PF00366 Ribosomal protein S17 U064_RS01495 PF00238 Ribosomal protein L14p/L23e U064_RS01500 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 U064_RS01500 PF00467 KOW motif U064_RS01505 PF00673 ribosomal L5P family C-terminus U064_RS01505 PF00281 Ribosomal protein L5 U064_RS01510 PF00253 Ribosomal protein S14p/S29e U064_RS01515 PF00410 Ribosomal protein S8 U064_RS01520 PF00347 Ribosomal protein L6 U064_RS01525 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast U064_RS01530 PF00333 Ribosomal protein S5, N-terminal domain U064_RS01530 PF03719 Ribosomal protein S5, C-terminal domain U064_RS01535 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A U064_RS01540 PF00344 SecY translocase U064_RS01545 PF00557 Metallopeptidase family M24 U064_RS01550 PF01176 Translation initiation factor 1A / IF-1 U064_RS01555 PF00444 Ribosomal protein L36 U064_RS01560 PF00416 Ribosomal protein S13/S18 U064_RS01565 PF00411 Ribosomal protein S11 U064_RS01570 PF01479 S4 domain U064_RS01570 PF00163 Ribosomal protein S4/S9 N-terminal domain U064_RS01575 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain U064_RS01575 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain U064_RS01575 PF01000 RNA polymerase Rpb3/RpoA insert domain U064_RS01580 PF01196 Ribosomal protein L17 U064_RS01595 PF03070 TENA/THI-4/PQQC family U064_RS01600 PF04264 YceI-like domain U064_RS01610 PF01075 Glycosyltransferase family 9 (heptosyltransferase) U064_RS01620 PF04715 Anthranilate synthase component I, N terminal region U064_RS01620 PF00425 chorismate binding enzyme U064_RS01625 PF00117 Glutamine amidotransferase class-I U064_RS01630 PF00591 Glycosyl transferase family, a/b domain U064_RS01630 PF02885 Glycosyl transferase family, helical bundle domain U064_RS01635 PF00218 Indole-3-glycerol phosphate synthase U064_RS01635 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase U064_RS01640 PF00291 Pyridoxal-phosphate dependent enzyme U064_RS01645 PF00290 Tryptophan synthase alpha chain U064_RS01655 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III U064_RS01655 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II U064_RS01655 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain U064_RS01655 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I U064_RS01665 PF00361 Proton-conducting membrane transporter U064_RS01670 PF00361 Proton-conducting membrane transporter U064_RS01670 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus U064_RS01675 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus U064_RS01675 PF00361 Proton-conducting membrane transporter U064_RS01680 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L U064_RS01685 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 U064_RS01690 PF12838 4Fe-4S dicluster domain U064_RS01695 PF00146 NADH dehydrogenase U064_RS01700 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region U064_RS01700 PF01568 Molydopterin dinucleotide binding domain U064_RS01700 PF00384 Molybdopterin oxidoreductase U064_RS01700 PF04879 Molybdopterin oxidoreductase Fe4S4 domain U064_RS01700 PF12838 4Fe-4S dicluster domain U064_RS01715 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit U064_RS01720 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit U064_RS01725 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit U064_RS01730 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 U064_RS01735 PF02146 Sir2 family U064_RS01745 PF00156 Phosphoribosyl transferase domain U064_RS01750 PF01765 Ribosome recycling factor U064_RS01755 PF03840 Preprotein translocase SecG subunit U064_RS01765 PF00579 tRNA synthetases class I (W and Y) U064_RS01770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle U064_RS01775 PF00528 Binding-protein-dependent transport system inner membrane component U064_RS01785 PF08501 Shikimate dehydrogenase substrate binding domain U064_RS01795 PF06144 DNA polymerase III, delta subunit U064_RS01800 PF01250 Ribosomal protein S6 U064_RS01805 PF00436 Single-strand binding protein family U064_RS01810 PF01084 Ribosomal protein S18 U064_RS01835 PF01411 tRNA synthetases class II (A) U064_RS01835 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain U064_RS01835 PF02272 DHHA1 domain U064_RS01840 PF02545 Maf-like protein U064_RS01850 PF00795 Carbon-nitrogen hydrolase U064_RS01855 PF00145 C-5 cytosine-specific DNA methylase U064_RS01865 PF00145 C-5 cytosine-specific DNA methylase U064_RS01875 PF01385 Probable transposase U064_RS01875 PF12323 Helix-turn-helix domain U064_RS01875 PF07282 Putative transposase DNA-binding domain U064_RS01910 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ U064_RS01935 PF13614 AAA domain U064_RS01950 PF01385 Probable transposase U064_RS01950 PF07282 Putative transposase DNA-binding domain U064_RS01950 PF12323 Helix-turn-helix domain U064_RS01980 PF12323 Helix-turn-helix domain U064_RS01980 PF01385 Probable transposase U064_RS01980 PF07282 Putative transposase DNA-binding domain U064_RS02000 PF00474 Sodium:solute symporter family U064_RS02005 PF01619 Proline dehydrogenase U064_RS02005 PF00171 Aldehyde dehydrogenase family U064_RS02005 PF18327 Proline utilization A proline dehydrogenase N-terminal domain U064_RS02005 PF14850 DNA-binding domain of Proline dehydrogenase U064_RS02060 PF01774 UreD urease accessory protein U064_RS02065 PF02492 CobW/HypB/UreG, nucleotide-binding domain U064_RS02070 PF01730 UreF U064_RS02075 PF02814 UreE urease accessory protein, N-terminal domain U064_RS02075 PF05194 UreE urease accessory protein, C-terminal domain U064_RS02080 PF02293 AmiS/UreI family transporter U064_RS02085 PF00449 Urease alpha-subunit, N-terminal domain U064_RS02085 PF01979 Amidohydrolase family U064_RS02090 PF00699 Urease beta subunit U064_RS02090 PF00547 Urease, gamma subunit U064_RS02100 PF01252 Signal peptidase (SPase) II U064_RS02105 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II U064_RS02105 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III U064_RS02105 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I U064_RS02105 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain U064_RS02110 PF01649 Ribosomal protein S20 U064_RS02115 PF00472 RF-1 domain U064_RS02115 PF03462 PCRF domain U064_RS02135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U064_RS02135 PF17200 Single Cache domain 2 U064_RS02135 PF00672 HAMP domain U064_RS02140 PF00380 Ribosomal protein S9/S16 U064_RS02145 PF00572 Ribosomal protein L13 U064_RS02150 PF17402 Family of unknown function (DUF5408) U064_RS02155 PF06039 Malate:quinone oxidoreductase (Mqo) U064_RS02165 PF04542 Sigma-70 region 2 U064_RS02165 PF00140 Sigma-70 factor, region 1.2 U064_RS02165 PF04539 Sigma-70 region 3 U064_RS02165 PF04545 Sigma-70, region 4 U064_RS02170 PF01048 Phosphorylase superfamily U064_RS02175 PF00698 Acyl transferase domain U064_RS02190 PF01555 DNA methylase U064_RS02195 PF01531 Glycosyl transferase family 11 U064_RS02210 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain U064_RS02210 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain U064_RS02220 PF00291 Pyridoxal-phosphate dependent enzyme U064_RS02225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U064_RS02225 PF00672 HAMP domain U064_RS02225 PF16591 Helical bimodular sensor domain U064_RS02230 PF02677 Epoxyqueuosine reductase QueH U064_RS02240 PF00535 Glycosyl transferase family 2 U064_RS02245 PF17200 Single Cache domain 2 U064_RS02245 PF00672 HAMP domain U064_RS02245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U064_RS02250 PF02872 5'-nucleotidase, C-terminal domain U064_RS02250 PF00149 Calcineurin-like phosphoesterase U064_RS02255 PF02664 S-Ribosylhomocysteinase (LuxS) U064_RS02260 PF01053 Cys/Met metabolism PLP-dependent enzyme U064_RS02265 PF00291 Pyridoxal-phosphate dependent enzyme U064_RS02275 PF00012 Hsp70 protein U064_RS02280 PF01025 GrpE U064_RS02305 PF00700 Bacterial flagellin C-terminal helical region U064_RS02305 PF07196 Flagellin hook IN motif U064_RS02305 PF00669 Bacterial flagellin N-terminal helical region U064_RS02310 PF01131 DNA topoisomerase U064_RS02310 PF01751 Toprim domain U064_RS02310 PF01396 Topoisomerase DNA binding C4 zinc finger U064_RS02315 PF04055 Radical SAM superfamily U064_RS02330 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain U064_RS02330 PF02896 PEP-utilising enzyme, TIM barrel domain U064_RS02330 PF00391 PEP-utilising enzyme, mobile domain U064_RS02340 PF03129 Anticodon binding domain U064_RS02340 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) U064_RS02340 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain U064_RS02345 PF05198 Translation initiation factor IF-3, N-terminal domain U064_RS02345 PF00707 Translation initiation factor IF-3, C-terminal domain U064_RS02350 PF01632 Ribosomal protein L35 U064_RS02355 PF00453 Ribosomal protein L20 U064_RS02380 PF03313 Serine dehydratase alpha chain U064_RS02380 PF03315 Serine dehydratase beta chain U064_RS02385 PF03222 Tryptophan/tyrosine permease family U064_RS02390 PF01474 Class-II DAHP synthetase family U064_RS02400 PF00578 AhpC/TSA family U064_RS02405 PF02589 LUD domain U064_RS02410 PF13183 4Fe-4S dicluster domain U064_RS02410 PF11870 Domain of unknown function (DUF3390) U064_RS02410 PF02589 LUD domain U064_RS02415 PF02754 Cysteine-rich domain U064_RS02420 PF02652 L-lactate permease U064_RS02425 PF02652 L-lactate permease U064_RS02430 PF14815 NUDIX domain U064_RS02430 PF00730 HhH-GPD superfamily base excision DNA repair protein U064_RS02430 PF00633 Helix-hairpin-helix motif U064_RS02435 PF00939 Sodium:sulfate symporter transmembrane region U064_RS02440 PF00115 Cytochrome C and Quinol oxidase polypeptide I U064_RS02455 PF13442 Cytochrome C oxidase, cbb3-type, subunit III U064_RS02455 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP U064_RS02485 PF00154 recA bacterial DNA recombination protein U064_RS02490 PF03952 Enolase, N-terminal domain U064_RS02490 PF00113 Enolase, C-terminal TIM barrel domain U064_RS02505 PF01202 Shikimate kinase U064_RS02520 PF08238 Sel1 repeat U064_RS02530 PF01709 Transcriptional regulator U064_RS02535 PF00490 Delta-aminolevulinic acid dehydratase U064_RS02545 PF00486 Transcriptional regulatory protein, C terminal U064_RS02545 PF00072 Response regulator receiver domain U064_RS02560 PF01136 Peptidase family U32 U064_RS02570 PF00472 RF-1 domain U064_RS02570 PF03462 PCRF domain U064_RS02575 PF03453 MoeA N-terminal region (domain I and II) U064_RS02575 PF03454 MoeA C-terminal region (domain IV) U064_RS02575 PF00994 Probable molybdopterin binding domain U064_RS02590 PF00639 PPIC-type PPIASE domain U064_RS02595 PF01116 Fructose-bisphosphate aldolase class-II U064_RS02600 PF09285 Elongation factor P, C-terminal U064_RS02600 PF08207 Elongation factor P (EF-P) KOW-like domain U064_RS02600 PF01132 Elongation factor P (EF-P) OB domain U064_RS02605 PF00145 C-5 cytosine-specific DNA methylase U064_RS02630 PF08666 SAF domain U064_RS02630 PF03102 NeuB family U064_RS02635 PF00005 ABC transporter U064_RS02640 PF00795 Carbon-nitrogen hydrolase U064_RS02650 PF00152 tRNA synthetases class II (D, K and N) U064_RS02650 PF01336 OB-fold nucleic acid binding domain U064_RS02655 PF00464 Serine hydroxymethyltransferase U064_RS02685 PF03350 Uncharacterized protein family, UPF0114 U064_RS02690 PF13091 PLD-like domain U064_RS02695 PF13085 2Fe-2S iron-sulfur cluster binding domain U064_RS02695 PF13183 4Fe-4S dicluster domain U064_RS02700 PF02910 Fumarate reductase flavoprotein C-term U064_RS02700 PF00890 FAD binding domain U064_RS02705 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit U064_RS02710 PF00121 Triosephosphate isomerase U064_RS02720 PF00132 Bacterial transferase hexapeptide (six repeats) U064_RS02720 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD U064_RS02725 PF02773 S-adenosylmethionine synthetase, C-terminal domain U064_RS02725 PF02772 S-adenosylmethionine synthetase, central domain U064_RS02725 PF00438 S-adenosylmethionine synthetase, N-terminal domain U064_RS02730 PF00334 Nucleoside diphosphate kinase U064_RS02740 PF01783 Ribosomal L32p protein family U064_RS02745 PF02504 Fatty acid synthesis protein U064_RS02750 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III U064_RS02750 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal U064_RS02770 PF01883 Iron-sulfur cluster assembly protein U064_RS02770 PF10609 NUBPL iron-transfer P-loop NTPase U064_RS02790 PF00183 Hsp90 protein U064_RS02795 PF08238 Sel1 repeat U064_RS02795 PF13181 Tetratricopeptide repeat U064_RS02800 PF01546 Peptidase family M20/M25/M40 U064_RS02800 PF07687 Peptidase dimerisation domain U064_RS02805 PF01134 Glucose inhibited division protein A U064_RS02805 PF13932 GidA associated domain U064_RS02810 PF00939 Sodium:sulfate symporter transmembrane region U064_RS02820 PF13288 DXP reductoisomerase C-terminal domain U064_RS02820 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase U064_RS02820 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain U064_RS02835 PF01161 Phosphatidylethanolamine-binding protein U064_RS02845 PF00266 Aminotransferase class-V U064_RS02850 PF01592 NifU-like N terminal domain U064_RS02850 PF01106 NifU-like domain U064_RS02850 PF04324 BFD-like [2Fe-2S] binding domain U064_RS02860 PF18073 Rubredoxin metal binding domain U064_RS02865 PF01641 SelR domain U064_RS02865 PF01625 Peptide methionine sulfoxide reductase U064_RS02875 PF01925 Sulfite exporter TauE/SafE U064_RS02885 PF01740 STAS domain U064_RS02885 PF00916 Sulfate permease family U064_RS02900 PF02348 Cytidylyltransferase U064_RS02915 PF03738 Glutathionylspermidine synthase preATP-grasp U064_RS02925 PF13181 Tetratricopeptide repeat U064_RS02925 PF13176 Tetratricopeptide repeat U064_RS02925 PF08238 Sel1 repeat U064_RS02935 PF03900 Porphobilinogen deaminase, C-terminal domain U064_RS02935 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain U064_RS02940 PF04073 Aminoacyl-tRNA editing domain U064_RS02940 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) U064_RS02940 PF03129 Anticodon binding domain U064_RS02945 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain U064_RS02945 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain U064_RS02945 PF01488 Shikimate / quinate 5-dehydrogenase U064_RS02950 PF00348 Polyprenyl synthetase U064_RS02965 PF00210 Ferritin-like domain U064_RS02970 PF00512 His Kinase A (phospho-acceptor) domain U064_RS02970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U064_RS02980 PF02119 Flagellar P-ring protein U064_RS02985 PF00271 Helicase conserved C-terminal domain U064_RS02985 PF00270 DEAD/DEAH box helicase U064_RS03000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region U064_RS03000 PF00005 ABC transporter U064_RS03005 PF00528 Binding-protein-dependent transport system inner membrane component U064_RS03005 PF12911 N-terminal TM domain of oligopeptide transport permease C U064_RS03025 PF00709 Adenylosuccinate synthetase U064_RS03040 PF02163 Peptidase family M50 U064_RS03045 PF13742 OB-fold nucleic acid binding domain U064_RS03045 PF02601 Exonuclease VII, large subunit U064_RS03050 PF18643 BsaWI restriction endonuclease type 2 U064_RS03055 PF01555 DNA methylase U064_RS03060 PF07724 AAA domain (Cdc48 subfamily) U064_RS03060 PF10431 C-terminal, D2-small domain, of ClpB protein U064_RS03060 PF00004 ATPase family associated with various cellular activities (AAA) U064_RS03060 PF02861 Clp amino terminal domain, pathogenicity island component U064_RS03060 PF17871 AAA lid domain U064_RS03065 PF02683 Cytochrome C biogenesis protein transmembrane region U064_RS03070 PF01979 Amidohydrolase family U064_RS03075 PF01979 Amidohydrolase family U064_RS03085 PF00919 Uncharacterized protein family UPF0004 U064_RS03085 PF04055 Radical SAM superfamily U064_RS03110 PF03692 Putative zinc- or iron-chelating domain U064_RS03120 PF00218 Indole-3-glycerol phosphate synthase U064_RS03130 PF02541 Ppx/GppA phosphatase family U064_RS03135 PF01075 Glycosyltransferase family 9 (heptosyltransferase) U064_RS03145 PF01702 Queuine tRNA-ribosyltransferase U064_RS03155 PF01761 3-dehydroquinate synthase U064_RS03165 PF00919 Uncharacterized protein family UPF0004 U064_RS03165 PF04055 Radical SAM superfamily U064_RS03170 PF01434 Peptidase family M41 U064_RS03170 PF00004 ATPase family associated with various cellular activities (AAA) U064_RS03170 PF17862 AAA+ lid domain U064_RS03190 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain U064_RS03190 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain U064_RS03205 PF04715 Anthranilate synthase component I, N terminal region U064_RS03205 PF00425 chorismate binding enzyme U064_RS03210 PF00795 Carbon-nitrogen hydrolase U064_RS03220 PF00829 Ribosomal prokaryotic L21 protein U064_RS03225 PF01016 Ribosomal L27 protein U064_RS03230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle U064_RS03235 PF00528 Binding-protein-dependent transport system inner membrane component U064_RS03240 PF12911 N-terminal TM domain of oligopeptide transport permease C U064_RS03240 PF00528 Binding-protein-dependent transport system inner membrane component U064_RS03245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region U064_RS03245 PF00005 ABC transporter U064_RS03250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region U064_RS03250 PF00005 ABC transporter U064_RS03255 PF01926 50S ribosome-binding GTPase U064_RS03255 PF01018 GTP1/OBG U064_RS03270 PF00202 Aminotransferase class-III U064_RS03285 PF00795 Carbon-nitrogen hydrolase U064_RS03290 PF01522 Polysaccharide deacetylase U064_RS03300 PF01555 DNA methylase U064_RS03310 PF07683 Cobalamin synthesis protein cobW C-terminal domain U064_RS03310 PF02492 CobW/HypB/UreG, nucleotide-binding domain U064_RS03335 PF10615 Protein of unknown function (DUF2470) U064_RS03335 PF01243 Pyridoxamine 5'-phosphate oxidase U064_RS03340 PF05746 DALR anticodon binding domain U064_RS03340 PF00750 tRNA synthetases class I (R) U064_RS03340 PF03485 Arginyl tRNA synthetase N terminal domain U064_RS03345 PF02416 mttA/Hcf106 family U064_RS03350 PF00625 Guanylate kinase U064_RS03370 PF02107 Flagellar L-ring protein U064_RS03375 PF02348 Cytidylyltransferase U064_RS03380 PF02348 Cytidylyltransferase U064_RS03390 PF02606 Tetraacyldisaccharide-1-P 4'-kinase U064_RS03395 PF02540 NAD synthase U064_RS03405 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain U064_RS03405 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain U064_RS03410 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain U064_RS03415 PF03776 Septum formation topological specificity factor MinE U064_RS03420 PF02481 DNA recombination-mediator protein A U064_RS03420 PF17782 DprA winged helix domain U064_RS03425 PF03652 Holliday junction resolvase U064_RS03430 PF08238 Sel1 repeat U064_RS03460 PF00924 Mechanosensitive ion channel U064_RS03490 PF02163 Peptidase family M50 U064_RS03500 PF12327 FtsZ family, C-terminal domain U064_RS03500 PF00091 Tubulin/FtsZ family, GTPase domain U064_RS03505 PF02491 SHS2 domain inserted in FTSA U064_RS03515 PF00202 Aminotransferase class-III U064_RS03520 PF02686 Glu-tRNAGln amidotransferase C subunit U064_RS03525 PF06415 BPG-independent PGAM N-terminus (iPGM_N) U064_RS03525 PF01676 Metalloenzyme superfamily U064_RS03535 PF02092 Glycyl-tRNA synthetase beta subunit U064_RS03550 PF00873 AcrB/AcrD/AcrF family U064_RS03580 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus U064_RS03580 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus U064_RS03585 PF02091 Glycyl-tRNA synthetase alpha subunit U064_RS03590 PF01784 NIF3 (NGG1p interacting factor 3) U064_RS03600 PF02390 Putative methyltransferase U064_RS03600 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) U064_RS03605 PF00849 RNA pseudouridylate synthase U064_RS03610 PF01790 Prolipoprotein diacylglyceryl transferase U064_RS03615 PF00881 Nitroreductase family U064_RS03625 PF18146 Damage-inducible protein CinA KH domain U064_RS03625 PF00994 Probable molybdopterin binding domain U064_RS03625 PF02464 Competence-damaged protein U064_RS03635 PF17848 Acetyl-coA carboxylase zinc finger domain U064_RS03635 PF01039 Carboxyl transferase domain U064_RS03640 PF02590 Predicted SPOUT methyltransferase U064_RS03655 PF03553 Na+/H+ antiporter family U064_RS03675 PF13146 TRL-like protein family U064_RS03685 PF01042 Endoribonuclease L-PSP U064_RS03690 PF01266 FAD dependent oxidoreductase U064_RS03695 PF01235 Sodium:alanine symporter family U064_RS03700 PF01168 Alanine racemase, N-terminal domain U064_RS03700 PF00842 Alanine racemase, C-terminal domain U064_RS03705 PF00497 Bacterial extracellular solute-binding proteins, family 3 U064_RS03710 PF00528 Binding-protein-dependent transport system inner membrane component U064_RS03720 PF00083 Sugar (and other) transporter U064_RS03720 PF08946 Osmosensory transporter coiled coil U064_RS03740 PF01242 6-pyruvoyl tetrahydropterin synthase U064_RS03750 PF01975 Survival protein SurE U064_RS03755 PF00348 Polyprenyl synthetase U064_RS03760 PF01227 GTP cyclohydrolase I U064_RS03765 PF01435 Peptidase family M48 U064_RS03770 PF01142 tRNA pseudouridine synthase D (TruD) U064_RS03775 PF02132 RecR protein U064_RS03780 PF01361 Tautomerase enzyme U064_RS03790 PF02691 Vacuolating cyotoxin U064_RS03790 PF03797 Autotransporter beta-domain U064_RS03795 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain U064_RS03795 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain U064_RS03800 PF01027 Inhibitor of apoptosis-promoting Bax1 U064_RS03805 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain U064_RS03805 PF02142 MGS-like domain U064_RS03805 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain U064_RS03840 PF13361 UvrD-like helicase C-terminal domain U064_RS03840 PF00580 UvrD/REP helicase N-terminal domain U064_RS03855 PF00460 Flagella basal body rod protein U064_RS03855 PF06429 Flagellar basal body rod FlgEFG protein C-terminal U064_RS03855 PF07559 Flagellar basal body protein FlaE U064_RS03855 PF06429 Flagellar basal body rod FlgEFG protein C-terminal U064_RS03855 PF00460 Flagella basal body rod protein U064_RS03855 PF07559 Flagellar basal body protein FlaE U064_RS03860 PF03963 Flagellar hook capping protein - N-terminal region U064_RS03860 PF13860 FlgD Ig-like domain U064_RS03860 PF13861 FlgD Tudor-like domain U064_RS03890 PF02492 CobW/HypB/UreG, nucleotide-binding domain U064_RS03895 PF01455 HupF/HypC family U064_RS03900 PF01924 Hydrogenase formation hypA family U064_RS03935 PF03061 Thioesterase superfamily U064_RS03940 PF00106 short chain dehydrogenase U064_RS03945 PF01032 FecCD transport family U064_RS03950 PF00005 ABC transporter U064_RS03955 PF02691 Vacuolating cyotoxin U064_RS03955 PF03797 Autotransporter beta-domain U064_RS03960 PF02691 Vacuolating cyotoxin U064_RS03960 PF03797 Autotransporter beta-domain U064_RS03965 PF09190 DALR domain U064_RS03965 PF01406 tRNA synthetases class I (C) catalytic domain U064_RS03970 PF03023 Lipid II flippase MurJ U064_RS03980 PF01330 RuvA N terminal domain U064_RS03980 PF07499 RuvA, C-terminal domain U064_RS04005 PF00830 Ribosomal L28 family U064_RS04015 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 U064_RS04015 PF00953 Glycosyl transferase family 4 U064_RS04020 PF08245 Mur ligase middle domain U064_RS04020 PF02875 Mur ligase family, glutamate ligase domain U064_RS04025 PF04359 Protein of unknown function (DUF493) U064_RS04030 PF03061 Thioesterase superfamily U064_RS04035 PF00209 Sodium:neurotransmitter symporter family U064_RS04040 PF00209 Sodium:neurotransmitter symporter family U064_RS04045 PF02253 Phospholipase A1 U064_RS04050 PF02767 DNA polymerase III beta subunit, central domain U064_RS04050 PF00712 DNA polymerase III beta subunit, N-terminal domain U064_RS04050 PF02768 DNA polymerase III beta subunit, C-terminal domain U064_RS04055 PF00204 DNA gyrase B U064_RS04055 PF00986 DNA gyrase B subunit, carboxyl terminus U064_RS04055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U064_RS04055 PF01751 Toprim domain U064_RS04070 PF01464 Transglycosylase SLT domain U064_RS04070 PF10145 Phage-related minor tail protein U064_RS04070 PF01551 Peptidase family M23 U064_RS04080 PF15436 Plasminogen-binding protein pgbA N-terminal U064_RS04080 PF15437 Plasminogen-binding protein pgbA C-terminal U064_RS04085 PF01565 FAD binding domain U064_RS04085 PF02913 FAD linked oxidases, C-terminal domain U064_RS04090 PF01113 Dihydrodipicolinate reductase, N-terminus U064_RS04090 PF05173 Dihydrodipicolinate reductase, C-terminus U064_RS04100 PF00120 Glutamine synthetase, catalytic domain U064_RS04100 PF03951 Glutamine synthetase, beta-Grasp domain U064_RS04110 PF01281 Ribosomal protein L9, N-terminal domain U064_RS04110 PF03948 Ribosomal protein L9, C-terminal domain U064_RS04115 PF00227 Proteasome subunit U064_RS04120 PF07724 AAA domain (Cdc48 subfamily) U064_RS04120 PF10431 C-terminal, D2-small domain, of ClpB protein U064_RS04125 PF01926 50S ribosome-binding GTPase U064_RS04125 PF07650 KH domain U064_RS04160 PF02534 Type IV secretory system Conjugative DNA transfer U064_RS04165 PF00437 Type II/IV secretion system protein U064_RS04175 PF03743 Bacterial conjugation TrbI-like protein U064_RS04200 PF13117 Cag pathogenicity island protein Cag12 U064_RS04205 PF16707 Cag pathogenicity island protein S of Helicobacter pylori U064_RS04265 PF03135 CagE, TrbE, VirB family, component of type IV transporter system U064_RS04285 PF03507 CagA exotoxin U064_RS04290 PF01177 Asp/Glu/Hydantoin racemase U064_RS04295 PF07497 Rho termination factor, RNA-binding domain U064_RS04295 PF07498 Rho termination factor, N-terminal domain U064_RS04295 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain U064_RS04300 PF01197 Ribosomal protein L31 U064_RS04305 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases U064_RS04310 PF00588 SpoU rRNA Methylase family U064_RS04310 PF08032 RNA 2'-O ribose methyltransferase substrate binding U064_RS04335 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit U064_RS04340 PF00109 Beta-ketoacyl synthase, N-terminal domain U064_RS04340 PF02801 Beta-ketoacyl synthase, C-terminal domain U064_RS04345 PF00550 Phosphopantetheine attachment site U064_RS04355 PF01165 Ribosomal protein S21 U064_RS04370 PF04224 Protein of unknown function, DUF417 U064_RS04375 PF01678 Diaminopimelate epimerase U064_RS04380 PF01594 AI-2E family transporter U064_RS04390 PF01926 50S ribosome-binding GTPase U064_RS04390 PF06071 Protein of unknown function (DUF933) U064_RS04395 PF00883 Cytosol aminopeptidase family, catalytic domain U064_RS04405 PF00156 Phosphoribosyl transferase domain U064_RS04415 PF02502 Ribose/Galactose Isomerase U064_RS04420 PF02163 Peptidase family M50 U064_RS04425 PF10502 Signal peptidase, peptidase S26 U064_RS04430 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain U064_RS04430 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain U064_RS04465 PF04509 CheC-like family U064_RS04465 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term U064_RS04470 PF00633 Helix-hairpin-helix motif U064_RS04470 PF00730 HhH-GPD superfamily base excision DNA repair protein U064_RS04475 PF04023 FeoA domain U064_RS04495 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II U064_RS04495 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase U064_RS04495 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg U064_RS04500 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain U064_RS04510 PF08774 VRR-NUC domain U064_RS04510 PF04851 Type III restriction enzyme, res subunit U064_RS04515 PF01555 DNA methylase U064_RS04515 PF18273 Type III R-M EcoP15I C-terminal domain U064_RS04535 PF00912 Transglycosylase U064_RS04535 PF00905 Penicillin binding protein transpeptidase domain U064_RS04540 PF00155 Aminotransferase class I and II U064_RS04545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U064_RS04545 PF00672 HAMP domain U064_RS04545 PF12729 Four helix bundle sensory module for signal transduction U064_RS04550 PF00005 ABC transporter U064_RS04555 PF00700 Bacterial flagellin C-terminal helical region U064_RS04555 PF07196 Flagellin hook IN motif U064_RS04555 PF00669 Bacterial flagellin N-terminal helical region U064_RS04570 PF01208 Uroporphyrinogen decarboxylase (URO-D) U064_RS04585 PF00873 AcrB/AcrD/AcrF family U064_RS04595 PF08502 LeuA allosteric (dimerisation) domain U064_RS04595 PF00682 HMGL-like U064_RS04605 PF00005 ABC transporter U064_RS04615 PF00533 BRCA1 C Terminus (BRCT) domain U064_RS04615 PF01653 NAD-dependent DNA ligase adenylation domain U064_RS04615 PF03120 NAD-dependent DNA ligase OB-fold domain U064_RS04620 PF01584 CheW-like domain U064_RS04620 PF00072 Response regulator receiver domain U064_RS04625 PF00152 tRNA synthetases class II (D, K and N) U064_RS04625 PF01336 OB-fold nucleic acid binding domain U064_RS04625 PF02938 GAD domain U064_RS04640 PF00719 Inorganic pyrophosphatase U064_RS04645 PF00488 MutS domain V U064_RS04645 PF01713 Smr domain U064_RS04655 PF08245 Mur ligase middle domain U064_RS04655 PF02875 Mur ligase family, glutamate ligase domain U064_RS04655 PF01225 Mur ligase family, catalytic domain U064_RS04660 PF00155 Aminotransferase class I and II U064_RS04665 PF04551 GcpE protein U064_RS04670 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle U064_RS04670 PF14602 Hexapeptide repeat of succinyl-transferase U064_RS04685 PF02525 Flavodoxin-like fold U064_RS04690 PF10518 TAT (twin-arginine translocation) pathway signal sequence U064_RS04690 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit U064_RS04690 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal U064_RS04695 PF00374 Nickel-dependent hydrogenase U064_RS04700 PF01292 Prokaryotic cytochrome b561 U064_RS04705 PF01750 Hydrogenase maturation protease U064_RS04730 PF06508 Queuosine biosynthesis protein QueC U064_RS04735 PF01743 Poly A polymerase head domain U064_RS04735 PF12627 Probable RNA and SrmB- binding site of polymerase A U064_RS04735 PF13735 tRNA nucleotidyltransferase domain 2 putative U064_RS04745 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase U064_RS04745 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase U064_RS04750 PF00881 Nitroreductase family U064_RS04755 PF00749 tRNA synthetases class I (E and Q), catalytic domain U064_RS04760 PF02325 YGGT family U064_RS04770 PF00483 Nucleotidyl transferase U064_RS04780 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) U064_RS04785 PF00206 Lyase U064_RS04785 PF10415 Fumarase C C-terminus U064_RS04795 PF18025 Alpha-(1,3)-fucosyltransferase FucT N-terminal domain U064_RS04795 PF00852 Glycosyltransferase family 10 (fucosyltransferase) C-term U064_RS04805 PF00210 Ferritin-like domain U064_RS04810 PF04055 Radical SAM superfamily U064_RS04815 PF07244 Surface antigen variable number repeat U064_RS04815 PF01103 Surface antigen U064_RS04820 PF04055 Radical SAM superfamily U064_RS04830 PF02637 GatB domain U064_RS04830 PF02934 GatB/GatE catalytic domain U064_RS04845 PF00075 RNase H U064_RS04850 PF14622 Ribonuclease-III-like U064_RS04850 PF00035 Double-stranded RNA binding motif U064_RS04855 PF01264 Chorismate synthase U064_RS04860 PF10788 Protein of unknown function (DUF2603) U064_RS04865 PF06969 HemN C-terminal domain U064_RS04865 PF04055 Radical SAM superfamily U064_RS04870 PF02754 Cysteine-rich domain U064_RS04875 PF00271 Helicase conserved C-terminal domain U064_RS04875 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) U064_RS04875 PF08463 EcoEI R protein C-terminal U064_RS04875 PF04851 Type III restriction enzyme, res subunit U064_RS04900 PF00155 Aminotransferase class I and II U064_RS04910 PF00589 Phage integrase family U064_RS04910 PF18644 Phage integrase SAM-like domain U064_RS04915 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain U064_RS04915 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain U064_RS04920 PF01925 Sulfite exporter TauE/SafE U064_RS04925 PF01408 Oxidoreductase family, NAD-binding Rossmann fold U064_RS04925 PF02894 Oxidoreductase family, C-terminal alpha/beta domain U064_RS04930 PF02867 Ribonucleotide reductase, barrel domain U064_RS04930 PF00317 Ribonucleotide reductase, all-alpha domain U064_RS04930 PF03477 ATP cone domain U064_RS04955 PF12804 MobA-like NTP transferase domain U064_RS04955 PF14602 Hexapeptide repeat of succinyl-transferase U064_RS04965 PF00813 FliP family U064_RS04975 PF07664 Ferrous iron transport protein B C terminus U064_RS04975 PF07670 Nucleoside recognition U064_RS04975 PF02421 Ferrous iron transport protein B U064_RS04985 PF02803 Thiolase, C-terminal domain U064_RS04985 PF00108 Thiolase, N-terminal domain U064_RS04990 PF01144 Coenzyme A transferase U064_RS04995 PF01144 Coenzyme A transferase U064_RS05000 PF02667 Short chain fatty acid transporter U064_RS05010 PF01968 Hydantoinase/oxoprolinase U064_RS05010 PF05378 Hydantoinase/oxoprolinase N-terminal region U064_RS05015 PF02538 Hydantoinase B/oxoprolinase U064_RS05020 PF08882 Acetone carboxylase gamma subunit U064_RS05035 PF01219 Prokaryotic diacylglycerol kinase U064_RS05040 PF00521 DNA gyrase/topoisomerase IV, subunit A U064_RS05040 PF03989 DNA gyrase C-terminal domain, beta-propeller U064_RS05050 PF00072 Response regulator receiver domain U064_RS05050 PF00158 Sigma-54 interaction domain U064_RS05070 PF17755 UvrA DNA-binding domain U064_RS05070 PF17760 UvrA interaction domain U064_RS05070 PF00005 ABC transporter U064_RS05080 PF01795 MraW methylase family U064_RS05090 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase U064_RS05105 PF04552 Sigma-54, DNA binding domain U064_RS05105 PF04963 Sigma-54 factor, core binding domain U064_RS05105 PF00309 Sigma-54 factor, Activator interacting domain (AID) U064_RS05110 PF00005 ABC transporter U064_RS05110 PF12399 Branched-chain amino acid ATP-binding cassette transporter U064_RS05120 PF12170 DNA polymerase III tau subunit V interacting with alpha U064_RS05120 PF12169 DNA polymerase III subunits gamma and tau domain III U064_RS05125 PF01810 LysE type translocator U064_RS05145 PF03605 Anaerobic c4-dicarboxylate membrane transporter U064_RS05150 PF17763 Glutaminase/Asparaginase C-terminal domain U064_RS05150 PF00710 Asparaginase, N-terminal U064_RS05165 PF01207 Dihydrouridine synthase (Dus) U064_RS05170 PF01171 PP-loop family U064_RS05195 PF00919 Uncharacterized protein family UPF0004 U064_RS05195 PF04055 Radical SAM superfamily U064_RS05200 PF00156 Phosphoribosyl transferase domain U064_RS05205 PF00266 Aminotransferase class-V U064_RS05210 PF04608 Phosphatidylglycerophosphatase A U064_RS05215 PF01820 D-ala D-ala ligase N-terminus U064_RS05215 PF07478 D-ala D-ala ligase C-terminus U064_RS05225 PF01225 Mur ligase family, catalytic domain U064_RS05225 PF08245 Mur ligase middle domain U064_RS05225 PF02875 Mur ligase family, glutamate ligase domain U064_RS05230 PF01230 HIT domain U064_RS05235 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase U064_RS05235 PF14572 Phosphoribosyl synthetase-associated domain U064_RS05250 PF01479 S4 domain U064_RS05250 PF00849 RNA pseudouridylate synthase U064_RS05260 PF02390 Putative methyltransferase U064_RS05265 PF00005 ABC transporter U064_RS05285 PF02465 Flagellar hook-associated protein 2 N-terminus U064_RS05285 PF07195 Flagellar hook-associated protein 2 C-terminus U064_RS05290 PF02561 Flagellar protein FliS U064_RS05300 PF00899 ThiF family U064_RS05300 PF00581 Rhodanese-like domain U064_RS05310 PF00795 Carbon-nitrogen hydrolase U064_RS05315 PF03553 Na+/H+ antiporter family U064_RS05315 PF13726 Na+-H+ antiporter family U064_RS05320 PF01554 MatE U064_RS05325 PF00013 KH domain U064_RS05325 PF01966 HD domain U064_RS05325 PF12072 Domain of unknown function (DUF3552) U064_RS05340 PF00448 SRP54-type protein, GTPase domain U064_RS05365 PF04055 Radical SAM superfamily U064_RS05365 PF06463 Molybdenum Cofactor Synthesis C U064_RS05370 PF12804 MobA-like NTP transferase domain U064_RS05375 PF01312 FlhB HrpN YscU SpaS Family U064_RS05385 PF01520 N-acetylmuramoyl-L-alanine amidase U064_RS05390 PF00162 Phosphoglycerate kinase U064_RS05395 PF01479 S4 domain U064_RS05395 PF00579 tRNA synthetases class I (W and Y) U064_RS05400 PF02824 TGS domain U064_RS05400 PF04607 Region found in RelA / SpoT proteins U064_RS05400 PF13291 ACT domain U064_RS05405 PF01192 RNA polymerase Rpb6 U064_RS05410 PF00696 Amino acid kinase family U064_RS05420 PF11791 Aconitate B N-terminal domain U064_RS05420 PF00330 Aconitase family (aconitate hydratase) U064_RS05420 PF06434 Aconitate hydratase 2 N-terminus U064_RS05455 PF03548 Outer membrane lipoprotein carrier protein LolA U064_RS05460 PF01043 SecA preprotein cross-linking domain U064_RS05460 PF07517 SecA DEAD-like domain U064_RS05460 PF02810 SEC-C motif U064_RS05460 PF07516 SecA Wing and Scaffold domain U064_RS05475 PF01420 Type I restriction modification DNA specificity domain U064_RS05480 PF00403 Heavy-metal-associated domain U064_RS05485 PF13335 Magnesium chelatase, subunit ChlI C-terminal U064_RS05485 PF01078 Magnesium chelatase, subunit ChlI U064_RS05490 PF01327 Polypeptide deformylase U064_RS05495 PF00574 Clp protease U064_RS05500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase U064_RS05500 PF05697 Bacterial trigger factor protein (TF) U064_RS05500 PF05698 Bacterial trigger factor protein (TF) C-terminus U064_RS05510 PF05211 Neuraminyllactose-binding hemagglutinin precursor (NLBH) U064_RS05515 PF01967 MoaC family U064_RS05520 PF00994 Probable molybdopterin binding domain U064_RS05525 PF02391 MoaE protein U064_RS05535 PF00925 GTP cyclohydrolase II U064_RS05545 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase U064_RS05545 PF00925 GTP cyclohydrolase II U064_RS05565 PF01648 4'-phosphopantetheinyl transferase superfamily U064_RS05570 PF03748 Flagellar basal body-associated protein FliL U064_RS05590 PF00753 Metallo-beta-lactamase superfamily U064_RS05595 PF00899 ThiF family U064_RS05600 PF01618 MotA/TolQ/ExbB proton channel family U064_RS05605 PF13677 Membrane MotB of proton-channel complex MotA/MotB U064_RS05605 PF00691 OmpA family U064_RS05615 PF04069 Substrate binding domain of ABC-type glycine betaine transport system U064_RS05620 PF00005 ABC transporter U064_RS05620 PF00571 CBS domain U064_RS05635 PF01541 GIY-YIG catalytic domain U064_RS05635 PF02151 UvrB/uvrC motif U064_RS05635 PF08459 UvrC Helix-hairpin-helix N-terminal U064_RS05640 PF03447 Homoserine dehydrogenase, NAD binding domain U064_RS05640 PF00742 Homoserine dehydrogenase U064_RS05640 PF01842 ACT domain U064_RS05645 PF02021 Uncharacterised protein family UPF0102 U064_RS05650 PF00085 Thioredoxin U064_RS05655 PF07992 Pyridine nucleotide-disulphide oxidoreductase U064_RS05665 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) U064_RS05670 PF00119 ATP synthase A chain U064_RS05675 PF00571 CBS domain U064_RS05675 PF00478 IMP dehydrogenase / GMP reductase domain U064_RS05680 PF01425 Amidase U064_RS05685 PF01121 Dephospho-CoA kinase U064_RS05690 PF17284 Spermidine synthase tetramerisation domain U064_RS05700 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal U064_RS05700 PF01926 50S ribosome-binding GTPase U064_RS05705 PF00216 Bacterial DNA-binding protein U064_RS05730 PF02719 Polysaccharide biosynthesis protein U064_RS05735 PF04127 DNA / pantothenate metabolism flavoprotein U064_RS05735 PF02441 Flavoprotein U064_RS05745 PF02581 Thiamine monophosphate synthase U064_RS05750 PF08543 Phosphomethylpyrimidine kinase U064_RS05755 PF02110 Hydroxyethylthiazole kinase family U064_RS05765 PF12323 Helix-turn-helix domain U064_RS05765 PF01385 Probable transposase U064_RS05765 PF07282 Putative transposase DNA-binding domain U064_RS05775 PF02384 N-6 DNA Methylase U064_RS05775 PF12161 HsdM N-terminal domain U064_RS05780 PF01569 PAP2 superfamily U064_RS05790 PF00005 ABC transporter U064_RS05790 PF12848 ABC transporter U064_RS05795 PF00478 IMP dehydrogenase / GMP reductase domain U064_RS05800 PF13580 SIS domain U064_RS05805 PF00294 pfkB family carbohydrate kinase U064_RS05805 PF01467 Cytidylyltransferase-like U064_RS05810 PF01370 NAD dependent epimerase/dehydratase family U064_RS05825 PF03309 Type III pantothenate kinase U064_RS05830 PF15437 Plasminogen-binding protein pgbA C-terminal U064_RS05840 PF00692 dUTPase U064_RS05845 PF03449 Transcription elongation factor, N-terminal U064_RS05845 PF01272 Transcription elongation factor, GreA/GreB, C-term U064_RS05850 PF02684 Lipid-A-disaccharide synthetase U064_RS05860 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA U064_RS05865 PF06429 Flagellar basal body rod FlgEFG protein C-terminal U064_RS05865 PF00460 Flagella basal body rod protein U064_RS05865 PF07196 Flagellin hook IN motif U064_RS05865 PF07559 Flagellar basal body protein FlaE U064_RS05870 PF02611 CDP-diacylglycerol pyrophosphatase U064_RS05875 PF03831 PhnA domain U064_RS05875 PF08274 PhnA Zinc-Ribbon U064_RS05890 PF00199 Catalase U064_RS05890 PF06628 Catalase-related immune-responsive U064_RS05900 PF02075 Crossover junction endodeoxyribonuclease RuvC U064_RS05955 PF03144 Elongation factor Tu domain 2 U064_RS05955 PF00009 Elongation factor Tu GTP binding domain U064_RS05955 PF00679 Elongation factor G C-terminus U064_RS05965 PF02384 N-6 DNA Methylase U064_RS05975 PF00749 tRNA synthetases class I (E and Q), catalytic domain U064_RS05980 PF03459 TOBE domain U064_RS05980 PF00005 ABC transporter U064_RS05985 PF00528 Binding-protein-dependent transport system inner membrane component U064_RS06000 PF00999 Sodium/hydrogen exchanger family U064_RS06000 PF02254 TrkA-N domain U064_RS06035 PF11867 Domain of unknown function (DUF3387) U064_RS06035 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) U064_RS06035 PF18766 SWI2/SNF2 ATPase U064_RS06040 PF07282 Putative transposase DNA-binding domain U064_RS06040 PF01385 Probable transposase U064_RS06040 PF12323 Helix-turn-helix domain U064_RS06050 PF12008 Type I restriction and modification enzyme - subunit R C terminal U064_RS06050 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) U064_RS06050 PF18766 SWI2/SNF2 ATPase U064_RS06055 PF12161 HsdM N-terminal domain U064_RS06055 PF02384 N-6 DNA Methylase U064_RS06070 PF13089 Polyphosphate kinase N-terminal domain U064_RS06070 PF02503 Polyphosphate kinase middle domain U064_RS06070 PF13090 Polyphosphate kinase C-terminal domain 2 U064_RS06070 PF17941 Polyphosphate kinase C-terminal domain 1 U064_RS06075 PF01180 Dihydroorotate dehydrogenase U064_RS06085 PF00701 Dihydrodipicolinate synthetase family U064_RS06100 PF01066 CDP-alcohol phosphatidyltransferase U064_RS06105 PF00324 Amino acid permease U064_RS06110 PF13180 PDZ domain U064_RS06110 PF17820 PDZ domain U064_RS06115 PF02542 YgbB family U064_RS06115 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase U064_RS06120 PF00486 Transcriptional regulatory protein, C terminal U064_RS06120 PF00072 Response regulator receiver domain U064_RS06125 PF01367 5'-3' exonuclease, C-terminal SAM fold U064_RS06125 PF01612 3'-5' exonuclease U064_RS06125 PF00476 DNA polymerase family A U064_RS06125 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain U064_RS06135 PF01556 DnaJ C terminal domain U064_RS06135 PF00226 DnaJ domain U064_RS06140 PF13411 MerR HTH family regulatory protein U064_RS06145 PF05496 Holliday junction DNA helicase RuvB P-loop domain U064_RS06145 PF12002 MgsA AAA+ ATPase C terminal U064_RS06145 PF01661 Macro domain U064_RS06145 PF16193 AAA C-terminal domain U064_RS06150 PF01475 Ferric uptake regulator family U064_RS06165 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term U064_RS06165 PF04509 CheC-like family U064_RS06170 PF02154 Flagellar motor switch protein FliM U064_RS06170 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term U064_RS06175 PF04542 Sigma-70 region 2 U064_RS06175 PF04545 Sigma-70, region 4 U064_RS06175 PF04539 Sigma-70 region 3 U064_RS06185 PF10609 NUBPL iron-transfer P-loop NTPase U064_RS06190 PF00448 SRP54-type protein, GTPase domain U064_RS06195 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) U064_RS06200 PF01321 Creatinase/Prolidase N-terminal domain U064_RS06200 PF00557 Metallopeptidase family M24 U064_RS06205 PF01220 Dehydroquinase class II U064_RS06215 PF00312 Ribosomal protein S15 U064_RS06220 PF00771 FHIPEP family U064_RS06230 PF00072 Response regulator receiver domain U064_RS06230 PF00486 Transcriptional regulatory protein, C terminal U064_RS06235 PF00149 Calcineurin-like phosphoesterase U064_RS06240 PF13193 AMP-binding enzyme C-terminal domain U064_RS06240 PF16177 Acetyl-coenzyme A synthetase N-terminus U064_RS06240 PF00501 AMP-binding enzyme U064_RS06245 PF17384 RimP C-terminal SH3 domain U064_RS06245 PF02576 RimP N-terminal domain U064_RS06250 PF02033 Ribosome-binding factor A U064_RS06255 PF00009 Elongation factor Tu GTP binding domain U064_RS06255 PF11987 Translation-initiation factor 2 U064_RS06255 PF04760 Translation initiation factor IF-2, N-terminal region U064_RS06265 PF00288 GHMP kinases N terminal domain U064_RS06275 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase U064_RS06280 PF03775 Septum formation inhibitor MinC, C-terminal domain U064_RS06305 PF02548 Ketopantoate hydroxymethyltransferase U064_RS06310 PF17864 RuvB AAA lid domain U064_RS06310 PF05491 RuvB C-terminal winged helix domain U064_RS06310 PF05496 Holliday junction DNA helicase RuvB P-loop domain U064_RS06320 PF00902 Sec-independent protein translocase protein (TatC) U064_RS06325 PF02547 Queuosine biosynthesis protein U064_RS06330 PF02527 rRNA small subunit methyltransferase G U064_RS06355 PF00072 Response regulator receiver domain U064_RS06365 PF17862 AAA+ lid domain U064_RS06365 PF00004 ATPase family associated with various cellular activities (AAA) U064_RS06365 PF01434 Peptidase family M41 U064_RS06375 PF01066 CDP-alcohol phosphatidyltransferase U064_RS06380 PF00403 Heavy-metal-associated domain U064_RS06385 PF00403 Heavy-metal-associated domain U064_RS06400 PF03824 High-affinity nickel-transport protein U064_RS06410 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system U064_RS06425 PF00664 ABC transporter transmembrane region U064_RS06425 PF00005 ABC transporter U064_RS06435 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain U064_RS06435 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain U064_RS06445 PF00163 Ribosomal protein S4/S9 N-terminal domain U064_RS06445 PF01479 S4 domain U064_RS06450 PF01687 Riboflavin kinase U064_RS06450 PF06574 FAD synthetase U064_RS06455 PF00456 Transketolase, thiamine diphosphate binding domain U064_RS06455 PF02780 Transketolase, C-terminal domain U064_RS06455 PF02779 Transketolase, pyrimidine binding domain U064_RS06465 PF17854 FtsK alpha domain U064_RS06465 PF09397 Ftsk gamma domain U064_RS06465 PF01580 FtsK/SpoIIIE family U064_RS06470 PF00083 Sugar (and other) transporter U064_RS06475 PF00460 Flagella basal body rod protein U064_RS06475 PF06429 Flagellar basal body rod FlgEFG protein C-terminal U064_RS06495 PF00679 Elongation factor G C-terminus U064_RS06495 PF00009 Elongation factor Tu GTP binding domain U064_RS06495 PF03144 Elongation factor Tu domain 2 U064_RS06495 PF06421 GTP-binding protein LepA C-terminus U064_RS06500 PF13292 1-deoxy-D-xylulose-5-phosphate synthase U064_RS06500 PF02780 Transketolase, C-terminal domain U064_RS06500 PF02779 Transketolase, pyrimidine binding domain U064_RS06510 PF14841 FliG middle domain U064_RS06510 PF01706 FliG C-terminal domain U064_RS06510 PF14842 FliG N-terminal domain U064_RS06515 PF08345 Flagellar M-ring protein C-terminal U064_RS06515 PF01514 Secretory protein of YscJ/FliF family U064_RS06525 PF06418 CTP synthase N-terminus U064_RS06525 PF00117 Glutamine amidotransferase class-I U064_RS06530 PF10141 Single-strand DNA-specific exonuclease, C terminal domain U064_RS06530 PF17768 RecJ OB domain U064_RS06530 PF02272 DHHA1 domain U064_RS06530 PF01368 DHH family U064_RS06535 PF00849 RNA pseudouridylate synthase U064_RS06575 PF00069 Protein kinase domain U064_RS06575 PF13191 AAA ATPase domain U064_RS06610 PF01385 Probable transposase U064_RS06610 PF07282 Putative transposase DNA-binding domain U064_RS06610 PF12323 Helix-turn-helix domain U064_RS06635 PF01751 Toprim domain U064_RS06635 PF01131 DNA topoisomerase U064_RS06640 PF03135 CagE, TrbE, VirB family, component of type IV transporter system U064_RS06710 PF17810 Arginine decarboxylase helical bundle domain U064_RS06710 PF17944 Arginine decarboxylase C-terminal helical extension U064_RS06710 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain U064_RS06725 PF08003 Protein of unknown function (DUF1698) U064_RS06735 PF09334 tRNA synthetases class I (M) U064_RS06735 PF01588 Putative tRNA binding domain U064_RS06735 PF00133 tRNA synthetases class I (I, L, M and V) U064_RS06745 PF00924 Mechanosensitive ion channel U064_RS06785 PF00117 Glutamine amidotransferase class-I U064_RS06785 PF02540 NAD synthase U064_RS06785 PF00958 GMP synthase C terminal domain U064_RS06795 PF18364 Molybdopterin oxidoreductase N-terminal domain U064_RS06795 PF01568 Molydopterin dinucleotide binding domain U064_RS06795 PF00384 Molybdopterin oxidoreductase U064_RS06805 PF02347 Glycine cleavage system P-protein U064_RS06810 PF01230 HIT domain U064_RS06815 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain U064_RS06815 PF01409 tRNA synthetases class II core domain (F) U064_RS06820 PF03147 Ferredoxin-fold anticodon binding domain U064_RS06820 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain U064_RS06820 PF01588 Putative tRNA binding domain U064_RS06820 PF03484 tRNA synthetase B5 domain U064_RS06825 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) U064_RS06830 PF02401 LytB protein U064_RS06835 PF00575 S1 RNA binding domain U064_RS06845 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain U064_RS06845 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain U064_RS06845 PF01842 ACT domain U064_RS06850 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase U064_RS06855 PF01168 Alanine racemase, N-terminal domain U064_RS06865 PF00072 Response regulator receiver domain U064_RS06865 PF01584 CheW-like domain U064_RS06870 PF00072 Response regulator receiver domain U064_RS06870 PF01584 CheW-like domain U064_RS06870 PF02895 Signal transducing histidine kinase, homodimeric domain U064_RS06870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U064_RS06870 PF01627 Hpt domain U064_RS06875 PF01584 CheW-like domain U064_RS06880 PF08534 Redoxin U064_RS06885 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain U064_RS06885 PF02777 Iron/manganese superoxide dismutases, C-terminal domain U064_RS06890 PF13649 Methyltransferase domain U064_RS06895 PF18074 Primosomal protein N C-terminal domain U064_RS06895 PF18319 PriA DNA helicase Cys-rich region (CRR) domain U064_RS06895 PF00271 Helicase conserved C-terminal domain U064_RS06895 PF17764 3′ DNA-binding domain (3′BD) U064_RS06895 PF00270 DEAD/DEAH box helicase U064_RS06920 PF01435 Peptidase family M48 U064_RS06925 PF05175 Methyltransferase small domain U064_RS06925 PF17827 PrmC N-terminal domain U064_RS06930 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain U064_RS06930 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase U064_RS06935 PF00852 Glycosyltransferase family 10 (fucosyltransferase) C-term U064_RS06935 PF18025 Alpha-(1,3)-fucosyltransferase FucT N-terminal domain U064_RS06940 PF01578 Cytochrome C assembly protein U064_RS06940 PF05140 ResB-like family U064_RS06950 PF00762 Ferrochelatase U064_RS06960 PF04452 RNA methyltransferase U064_RS06970 PF00692 dUTPase U064_RS06975 PF00364 Biotin-requiring enzyme U064_RS06980 PF00289 Biotin carboxylase, N-terminal domain U064_RS06980 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain U064_RS06980 PF02785 Biotin carboxylase C-terminal domain U064_RS07010 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family U064_RS07020 PF00268 Ribonucleotide reductase, small chain U064_RS07035 PF01416 tRNA pseudouridine synthase U064_RS07040 PF01370 NAD dependent epimerase/dehydratase family U064_RS07060 PF00106 short chain dehydrogenase U064_RS07065 PF08238 Sel1 repeat U064_RS07070 PF01081 KDPG and KHG aldolase U064_RS07075 PF00920 Dehydratase family U064_RS07080 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain U064_RS07080 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain U064_RS07085 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase U064_RS07090 PF02685 Glucokinase U064_RS07095 PF00107 Zinc-binding dehydrogenase U064_RS07095 PF08240 Alcohol dehydrogenase GroES-like domain U064_RS07120 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase U064_RS07130 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II U064_RS07130 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg U064_RS07135 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain U064_RS07140 PF00206 Lyase U064_RS07140 PF10397 Adenylosuccinate lyase C-terminus U064_RS07150 PF17757 UvrB interaction domain U064_RS07150 PF04851 Type III restriction enzyme, res subunit U064_RS07150 PF02151 UvrB/uvrC motif U064_RS07150 PF12344 Ultra-violet resistance protein B U064_RS07150 PF00271 Helicase conserved C-terminal domain U064_RS07180 PF07559 Flagellar basal body protein FlaE U064_RS07180 PF00460 Flagella basal body rod protein U064_RS07180 PF06429 Flagellar basal body rod FlgEFG protein C-terminal U064_RS07190 PF00145 C-5 cytosine-specific DNA methylase U064_RS07205 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase U064_RS07215 PF00691 OmpA family U064_RS07220 PF07676 WD40-like Beta Propeller Repeat U064_RS07230 PF02472 Biopolymer transport protein ExbD/TolR U064_RS07235 PF01618 MotA/TolQ/ExbB proton channel family U064_RS07240 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain U064_RS07245 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain U064_RS07245 PF02874 ATP synthase alpha/beta family, beta-barrel domain U064_RS07250 PF00231 ATP synthase U064_RS07255 PF02874 ATP synthase alpha/beta family, beta-barrel domain U064_RS07255 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain U064_RS07255 PF00306 ATP synthase alpha/beta chain, C terminal domain U064_RS07265 PF00430 ATP synthase B/B' CF(0) U064_RS07275 PF17762 HTH domain found in ParB protein U064_RS07275 PF02195 ParB-like nuclease domain U064_RS07280 PF13614 AAA domain U064_RS07285 PF03099 Biotin/lipoate A/B protein ligase family U064_RS07285 PF08279 HTH domain U064_RS07285 PF02237 Biotin protein ligase C terminal domain U064_RS07290 PF02911 Formyl transferase, C-terminal domain U064_RS07290 PF00551 Formyl transferase U064_RS07320 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD U064_RS07325 PF02599 Global regulator protein family U064_RS07330 PF00288 GHMP kinases N terminal domain U064_RS07335 PF01668 SmpB protein U064_RS07340 PF01618 MotA/TolQ/ExbB proton channel family U064_RS07345 PF02472 Biopolymer transport protein ExbD/TolR U064_RS07350 PF00468 Ribosomal protein L34 U064_RS07355 PF00825 Ribonuclease P U064_RS07360 PF01809 Putative membrane protein insertion efficiency factor U064_RS07365 PF02096 60Kd inner membrane protein U064_RS07365 PF14849 YidC periplasmic domain U064_RS07375 PF10396 GTP-binding protein TrmE N-terminus U064_RS07375 PF12631 MnmE helical domain U064_RS07375 PF01926 50S ribosome-binding GTPase U064_RS07400 PF02169 LPP20 lipoprotein U064_RS07410 PF00085 Thioredoxin U064_RS07415 PF01479 S4 domain U064_RS07415 PF00849 RNA pseudouridylate synthase U064_RS07420 PF02811 PHP domain U064_RS07420 PF14579 Helix-hairpin-helix motif U064_RS07420 PF17657 Bacterial DNA polymerase III alpha subunit finger domain U064_RS07420 PF07733 Bacterial DNA polymerase III alpha NTPase domain U064_RS07425 PF00034 Cytochrome c U064_RS07425 PF03150 Di-haem cytochrome c peroxidase U064_RS07445 PF00005 ABC transporter U064_RS07445 PF09383 NIL domain U064_RS07450 PF02405 Permease MlaE U064_RS07460 PF01063 Amino-transferase class IV U064_RS07470 PF01367 5'-3' exonuclease, C-terminal SAM fold U064_RS07470 PF00476 DNA polymerase family A U064_RS07470 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain U064_RS07480 PF02384 N-6 DNA Methylase U064_RS07490 PF02223 Thymidylate kinase U064_RS07495 PF01467 Cytidylyltransferase-like U064_RS07500 PF02441 Flavoprotein U064_RS07510 PF00580 UvrD/REP helicase N-terminal domain U064_RS07510 PF13361 UvrD-like helicase C-terminal domain U064_RS07520 PF02403 Seryl-tRNA synthetase N-terminal domain U064_RS07520 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) U064_RS07530 PF02609 Exonuclease VII small subunit U064_RS07535 PF01209 ubiE/COQ5 methyltransferase family U064_RS07540 PF03653 Uncharacterised protein family (UPF0093) U064_RS07545 PF09186 Domain of unknown function (DUF1949) U064_RS07545 PF01205 Uncharacterized protein family UPF0029 U064_RS07560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion U064_RS07570 PF00571 CBS domain U064_RS07570 PF01595 Cyclin M transmembrane N-terminal domain U064_RS07570 PF03471 Transporter associated domain U064_RS07575 PF01384 Phosphate transporter family U064_RS07580 PF01106 NifU-like domain U064_RS07590 PF08245 Mur ligase middle domain U064_RS07590 PF02875 Mur ligase family, glutamate ligase domain U064_RS07595 PF00923 Transaldolase/Fructose-6-phosphate aldolase U064_RS07600 PF14693 Ribosomal protein TL5, C-terminal domain U064_RS07600 PF01386 Ribosomal L25p family U064_RS07605 PF01195 Peptidyl-tRNA hydrolase U064_RS07635 PF05175 Methyltransferase small domain U064_RS07640 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region U064_RS07640 PF01872 RibD C-terminal domain U064_RS07645 PF03616 Sodium/glutamate symporter U064_RS07650 PF16653 Saccharopine dehydrogenase C-terminal domain U064_RS07650 PF03435 Saccharopine dehydrogenase NADP binding domain U064_RS07655 PF12801 4Fe-4S binding domain U064_RS07655 PF13746 4Fe-4S dicluster domain U064_RS07655 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase U064_RS07660 PF02660 Glycerol-3-phosphate acyltransferase U064_RS07680 PF03841 L-seryl-tRNA selenium transferase U064_RS07685 PF08529 NusA N-terminal domain U064_RS07685 PF13184 NusA-like KH domain U064_RS07690 PF05437 Branched-chain amino acid transport protein (AzlD) U064_RS07705 PF04851 Type III restriction enzyme, res subunit U064_RS07705 PF08774 VRR-NUC domain U064_RS07715 PF18273 Type III R-M EcoP15I C-terminal domain U064_RS07715 PF01555 DNA methylase U064_RS07720 PF00271 Helicase conserved C-terminal domain U064_RS07720 PF04851 Type III restriction enzyme, res subunit U064_RS07735 PF03372 Endonuclease/Exonuclease/phosphatase family U064_RS07755 PF08299 Bacterial dnaA protein helix-turn-helix U064_RS07755 PF00308 Bacterial dnaA protein U064_RS07765 PF10398 Protein of unknown function (DUF2443) U064_RS07770 PF01380 SIS domain U064_RS07775 PF02511 Thymidylate synthase complementing protein U064_RS07805 PF00491 Arginase family U064_RS07810 PF01262 Alanine dehydrogenase/PNT, C-terminal domain U064_RS07810 PF05222 Alanine dehydrogenase/PNT, N-terminal domain U064_RS07825 PF01513 ATP-NAD kinase U064_RS07830 PF02463 RecF/RecN/SMC N terminal domain U064_RS07835 PF05670 NFACT protein RNA binding domain U064_RS07865 PF14480 DNA polymerase III polC-type N-terminus I U064_RS07865 PF11490 DNA polymerase III polC-type N-terminus II U064_RS07865 PF07733 Bacterial DNA polymerase III alpha NTPase domain U064_RS07865 PF17657 Bacterial DNA polymerase III alpha subunit finger domain U064_RS07865 PF14579 Helix-hairpin-helix motif U064_RS07865 PF02811 PHP domain U064_RS07865 PF00929 Exonuclease U064_RS07870 PF00834 Ribulose-phosphate 3 epimerase family U064_RS07875 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain U064_RS07895 PF00889 Elongation factor TS U064_RS07900 PF00318 Ribosomal protein S2 U064_RS07905 PF13361 UvrD-like helicase C-terminal domain U064_RS07905 PF00580 UvrD/REP helicase N-terminal domain U064_RS07910 PF06965 Na+/H+ antiporter 1 U064_RS07915 PF02699 Preprotein translocase subunit U064_RS07920 PF02355 Protein export membrane protein U064_RS07925 PF07549 SecD/SecF GG Motif U064_RS07925 PF02355 Protein export membrane protein U064_RS07935 PF09334 tRNA synthetases class I (M) U064_RS07935 PF13603 Leucyl-tRNA synthetase, Domain 2 U064_RS07935 PF00133 tRNA synthetases class I (I, L, M and V) U064_RS07945 PF08245 Mur ligase middle domain U064_RS07945 PF02875 Mur ligase family, glutamate ligase domain U064_RS07955 PF04225 Opacity-associated protein A LysM-like domain U064_RS07955 PF01551 Peptidase family M23 U064_RS07965 PF03461 TRCF domain U064_RS07965 PF17757 UvrB interaction domain U064_RS07965 PF00270 DEAD/DEAH box helicase U064_RS07965 PF00271 Helicase conserved C-terminal domain U064_RS07965 PF02559 CarD-like/TRCF domain U064_RS07970 PF00355 Rieske [2Fe-2S] domain U064_RS07970 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal U064_RS07975 PF00033 Cytochrome b/b6/petB U064_RS07975 PF00032 Cytochrome b(C-terminal)/b6/petD U064_RS07990 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system U064_RS07995 PF03717 Penicillin-binding Protein dimerisation domain U064_RS07995 PF00905 Penicillin binding protein transpeptidase domain U064_RS08000 PF02049 Flagellar hook-basal body complex protein FliE U064_RS08005 PF06429 Flagellar basal body rod FlgEFG protein C-terminal U064_RS08005 PF00460 Flagella basal body rod protein U064_RS08010 PF00460 Flagella basal body rod protein U064_RS08015 PF01098 Cell cycle protein U064_RS08030 PF00578 AhpC/TSA family U064_RS08030 PF10417 C-terminal domain of 1-Cys peroxiredoxin U064_RS08035 PF03180 NLPA lipoprotein U064_RS08040 PF03717 Penicillin-binding Protein dimerisation domain U064_RS08040 PF00905 Penicillin binding protein transpeptidase domain U064_RS08050 PF01926 50S ribosome-binding GTPase U064_RS08070 PF05036 Sporulation related domain U064_RS08070 PF03330 Lytic transglycolase U064_RS08075 PF01464 Transglycosylase SLT domain U064_RS08075 PF01476 LysM domain U064_RS08080 PF01026 TatD related DNase U064_RS08085 PF00677 Lumazine binding domain U064_RS08095 PF00005 ABC transporter U064_RS08095 PF09383 NIL domain U064_RS08100 PF00528 Binding-protein-dependent transport system inner membrane component U064_RS08115 PF01569 PAP2 superfamily U064_RS08120 PF00953 Glycosyl transferase family 4 U064_RS08125 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ U064_RS08130 PF04166 Pyridoxal phosphate biosynthetic protein PdxA U064_RS08135 PF00814 Glycoprotease family U064_RS08140 PF00460 Flagella basal body rod protein U064_RS08140 PF06429 Flagellar basal body rod FlgEFG protein C-terminal U064_RS08145 PF03981 Ubiquinol-cytochrome C chaperone U064_RS08160 PF13099 Domain of unknown function (DUF3944) U064_RS08160 PF03981 Ubiquinol-cytochrome C chaperone