locus-tag class description EE66_RS00005 PF03544 Gram-negative bacterial TonB protein C-terminal EE66_RS00010 PF02472 Biopolymer transport protein ExbD/TolR EE66_RS00015 PF01618 MotA/TolQ/ExbB proton channel family EE66_RS00020 PF01402 Ribbon-helix-helix protein, copG family EE66_RS00020 PF08753 NikR C terminal nickel binding domain EE66_RS00025 PF01467 Cytidylyltransferase-like EE66_RS00045 PF00684 DnaJ central domain EE66_RS00045 PF01556 DnaJ C terminal domain EE66_RS00045 PF00226 DnaJ domain EE66_RS00050 PF03591 AzlC protein EE66_RS00055 PF05437 Branched-chain amino acid transport protein (AzlD) EE66_RS00060 PF00873 AcrB/AcrD/AcrF family EE66_RS00065 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EE66_RS00065 PF00529 HlyD membrane-fusion protein of T1SS EE66_RS00080 PF00206 Lyase EE66_RS00080 PF10415 Fumarase C C-terminus EE66_RS00090 PF01351 Ribonuclease HII EE66_RS00105 PF00338 Ribosomal protein S10p/S20e EE66_RS00110 PF00297 Ribosomal protein L3 EE66_RS00115 PF00573 Ribosomal protein L4/L1 family EE66_RS00120 PF00276 Ribosomal protein L23 EE66_RS00125 PF03947 Ribosomal Proteins L2, C-terminal domain EE66_RS00125 PF00181 Ribosomal Proteins L2, RNA binding domain EE66_RS00130 PF00203 Ribosomal protein S19 EE66_RS00135 PF00237 Ribosomal protein L22p/L17e EE66_RS00140 PF07650 KH domain EE66_RS00140 PF00189 Ribosomal protein S3, C-terminal domain EE66_RS00145 PF00252 Ribosomal protein L16p/L10e EE66_RS00150 PF00831 Ribosomal L29 protein EE66_RS00155 PF00366 Ribosomal protein S17 EE66_RS00160 PF00238 Ribosomal protein L14p/L23e EE66_RS00165 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 EE66_RS00165 PF00467 KOW motif EE66_RS00170 PF00673 ribosomal L5P family C-terminus EE66_RS00170 PF00281 Ribosomal protein L5 EE66_RS00175 PF00253 Ribosomal protein S14p/S29e EE66_RS00180 PF00410 Ribosomal protein S8 EE66_RS00185 PF00347 Ribosomal protein L6 EE66_RS00190 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast EE66_RS00195 PF03719 Ribosomal protein S5, C-terminal domain EE66_RS00195 PF00333 Ribosomal protein S5, N-terminal domain EE66_RS00200 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A EE66_RS00205 PF00344 SecY translocase EE66_RS00210 PF00557 Metallopeptidase family M24 EE66_RS00215 PF01176 Translation initiation factor 1A / IF-1 EE66_RS00220 PF00444 Ribosomal protein L36 EE66_RS00225 PF00416 Ribosomal protein S13/S18 EE66_RS00230 PF00411 Ribosomal protein S11 EE66_RS00235 PF00163 Ribosomal protein S4/S9 N-terminal domain EE66_RS00235 PF01479 S4 domain EE66_RS00240 PF01000 RNA polymerase Rpb3/RpoA insert domain EE66_RS00240 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain EE66_RS00240 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain EE66_RS00245 PF01196 Ribosomal protein L17 EE66_RS00255 PF04973 Nicotinamide mononucleotide transporter EE66_RS00260 PF03070 TENA/THI-4/PQQC family EE66_RS00265 PF04264 YceI-like domain EE66_RS00275 PF01075 Glycosyltransferase family 9 (heptosyltransferase) EE66_RS00280 PF04715 Anthranilate synthase component I, N terminal region EE66_RS00280 PF00425 chorismate binding enzyme EE66_RS00285 PF00117 Glutamine amidotransferase class-I EE66_RS00290 PF02885 Glycosyl transferase family, helical bundle domain EE66_RS00290 PF00591 Glycosyl transferase family, a/b domain EE66_RS00295 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase EE66_RS00295 PF00218 Indole-3-glycerol phosphate synthase EE66_RS00300 PF00291 Pyridoxal-phosphate dependent enzyme EE66_RS00305 PF00290 Tryptophan synthase alpha chain EE66_RS00315 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EE66_RS00315 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EE66_RS00315 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EE66_RS00315 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EE66_RS00325 PF00361 Proton-conducting membrane transporter EE66_RS00330 PF00361 Proton-conducting membrane transporter EE66_RS00330 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus EE66_RS00335 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EE66_RS00335 PF00361 Proton-conducting membrane transporter EE66_RS00340 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L EE66_RS00345 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 EE66_RS00350 PF12838 4Fe-4S dicluster domain EE66_RS00355 PF00146 NADH dehydrogenase EE66_RS00360 PF12838 4Fe-4S dicluster domain EE66_RS00360 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EE66_RS00360 PF00384 Molybdopterin oxidoreductase EE66_RS00360 PF01568 Molydopterin dinucleotide binding domain EE66_RS00360 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region EE66_RS00375 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit EE66_RS00380 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit EE66_RS00385 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit EE66_RS00390 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 EE66_RS00395 PF02146 Sir2 family EE66_RS00405 PF00156 Phosphoribosyl transferase domain EE66_RS00410 PF01765 Ribosome recycling factor EE66_RS00415 PF03840 Preprotein translocase SecG subunit EE66_RS00425 PF00579 tRNA synthetases class I (W and Y) EE66_RS00430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EE66_RS00435 PF00528 Binding-protein-dependent transport system inner membrane component EE66_RS00445 PF08501 Shikimate dehydrogenase substrate binding domain EE66_RS00450 PF00773 RNB domain EE66_RS00455 PF06144 DNA polymerase III, delta subunit EE66_RS00460 PF01250 Ribosomal protein S6 EE66_RS00465 PF00436 Single-strand binding protein family EE66_RS00470 PF01084 Ribosomal protein S18 EE66_RS00485 PF02272 DHHA1 domain EE66_RS00485 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EE66_RS00485 PF01411 tRNA synthetases class II (A) EE66_RS00490 PF02545 Maf-like protein EE66_RS00505 PF00795 Carbon-nitrogen hydrolase EE66_RS00510 PF00117 Glutamine amidotransferase class-I EE66_RS00510 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain EE66_RS00525 PF00892 EamA-like transporter family EE66_RS00540 PF00809 Pterin binding enzyme EE66_RS00545 PF12169 DNA polymerase III subunits gamma and tau domain III EE66_RS00555 PF13840 ACT domain EE66_RS00555 PF01842 ACT domain EE66_RS00555 PF00696 Amino acid kinase family EE66_RS00560 PF00293 NUDIX domain EE66_RS00565 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EE66_RS00570 PF04055 Radical SAM superfamily EE66_RS00575 PF02537 CrcB-like protein, Camphor Resistance (CrcB) EE66_RS00595 PF01255 Putative undecaprenyl diphosphate synthase EE66_RS00600 PF00005 ABC transporter EE66_RS00610 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain EE66_RS00610 PF02843 Phosphoribosylglycinamide synthetase, C domain EE66_RS00610 PF02844 Phosphoribosylglycinamide synthetase, N domain EE66_RS00620 PF04453 LPS transport system D EE66_RS00620 PF03968 OstA-like protein EE66_RS00630 PF00013 KH domain EE66_RS00630 PF03725 3' exoribonuclease family, domain 2 EE66_RS00630 PF00575 S1 RNA binding domain EE66_RS00630 PF01138 3' exoribonuclease family, domain 1 EE66_RS00635 PF00137 ATP synthase subunit C EE66_RS00650 PF00132 Bacterial transferase hexapeptide (six repeats) EE66_RS00660 PF02086 D12 class N6 adenine-specific DNA methyltransferase EE66_RS00670 PF00005 ABC transporter EE66_RS00670 PF00664 ABC transporter transmembrane region EE66_RS00695 PF03143 Elongation factor Tu C-terminal domain EE66_RS00695 PF00009 Elongation factor Tu GTP binding domain EE66_RS00695 PF03144 Elongation factor Tu domain 2 EE66_RS00700 PF00471 Ribosomal protein L33 EE66_RS00715 PF02357 Transcription termination factor nusG EE66_RS00720 PF03946 Ribosomal protein L11, N-terminal domain EE66_RS00720 PF00298 Ribosomal protein L11, RNA binding domain EE66_RS00725 PF00687 Ribosomal protein L1p/L10e family EE66_RS00730 PF00466 Ribosomal protein L10 EE66_RS00735 PF00542 Ribosomal protein L7/L12 C-terminal domain EE66_RS00735 PF16320 Ribosomal protein L7/L12 dimerisation domain EE66_RS00745 PF04565 RNA polymerase Rpb2, domain 3 EE66_RS00745 PF04983 RNA polymerase Rpb1, domain 3 EE66_RS00745 PF04560 RNA polymerase Rpb2, domain 7 EE66_RS00745 PF10385 RNA polymerase beta subunit external 1 domain EE66_RS00745 PF04998 RNA polymerase Rpb1, domain 5 EE66_RS00745 PF04997 RNA polymerase Rpb1, domain 1 EE66_RS00745 PF00562 RNA polymerase Rpb2, domain 6 EE66_RS00745 PF00623 RNA polymerase Rpb1, domain 2 EE66_RS00745 PF04561 RNA polymerase Rpb2, domain 2 EE66_RS00745 PF05000 RNA polymerase Rpb1, domain 4 EE66_RS00745 PF04563 RNA polymerase beta subunit EE66_RS00750 PF00164 Ribosomal protein S12/S23 EE66_RS00755 PF00177 Ribosomal protein S7p/S5e EE66_RS00760 PF03144 Elongation factor Tu domain 2 EE66_RS00760 PF00009 Elongation factor Tu GTP binding domain EE66_RS00760 PF00679 Elongation factor G C-terminus EE66_RS00760 PF14492 Elongation Factor G, domain II EE66_RS00760 PF03764 Elongation factor G, domain IV EE66_RS00770 PF01075 Glycosyltransferase family 9 (heptosyltransferase) EE66_RS00775 PF03129 Anticodon binding domain EE66_RS00775 PF13393 Histidyl-tRNA synthetase EE66_RS00780 PF02774 Semialdehyde dehydrogenase, dimerisation domain EE66_RS00780 PF01118 Semialdehyde dehydrogenase, NAD binding domain EE66_RS00790 PF00194 Eukaryotic-type carbonic anhydrase EE66_RS00795 PF07690 Major Facilitator Superfamily EE66_RS00805 PF02254 TrkA-N domain EE66_RS00805 PF02080 TrkA-C domain EE66_RS00805 PF00999 Sodium/hydrogen exchanger family EE66_RS00810 PF01171 PP-loop family EE66_RS00815 PF07690 Major Facilitator Superfamily EE66_RS00825 PF01773 Na+ dependent nucleoside transporter N-terminus EE66_RS00825 PF07662 Na+ dependent nucleoside transporter C-terminus EE66_RS00830 PF01676 Metalloenzyme superfamily EE66_RS00835 PF01048 Phosphorylase superfamily EE66_RS00850 PF00860 Permease family EE66_RS00855 PF07690 Major Facilitator Superfamily EE66_RS00870 PF00005 ABC transporter EE66_RS00875 PF00528 Binding-protein-dependent transport system inner membrane component EE66_RS00880 PF00528 Binding-protein-dependent transport system inner membrane component EE66_RS00885 PF13722 5TM C-terminal transporter carbon starvation CstA EE66_RS00885 PF02554 Carbon starvation protein CstA EE66_RS00895 PF00342 Phosphoglucose isomerase EE66_RS00905 PF07992 Pyridine nucleotide-disulphide oxidoreductase EE66_RS00920 PF00258 Flavodoxin EE66_RS00925 PF02130 Uncharacterized protein family UPF0054 EE66_RS00930 PF02661 Fic/DOC family EE66_RS00935 PF03807 NADP oxidoreductase coenzyme F420-dependent EE66_RS00935 PF14748 Pyrroline-5-carboxylate reductase dimerisation EE66_RS00950 PF03033 Glycosyltransferase family 28 N-terminal domain EE66_RS00950 PF04101 Glycosyltransferase family 28 C-terminal domain EE66_RS00955 PF02623 FliW protein EE66_RS00960 PF10458 Valyl tRNA synthetase tRNA binding arm EE66_RS00960 PF00133 tRNA synthetases class I (I, L, M and V) EE66_RS00960 PF08264 Anticodon-binding domain of tRNA EE66_RS00965 PF02978 Signal peptide binding domain EE66_RS00965 PF02881 SRP54-type protein, helical bundle domain EE66_RS00965 PF00448 SRP54-type protein, GTPase domain EE66_RS00970 PF00886 Ribosomal protein S16 EE66_RS00980 PF01782 RimM N-terminal domain EE66_RS00980 PF05239 PRC-barrel domain EE66_RS00985 PF01746 tRNA (Guanine-1)-methyltransferase EE66_RS00990 PF01245 Ribosomal protein L19 EE66_RS01015 PF02911 Formyl transferase, C-terminal domain EE66_RS01015 PF00551 Formyl transferase EE66_RS01020 PF08279 HTH domain EE66_RS01020 PF03099 Biotin/lipoate A/B protein ligase family EE66_RS01020 PF02237 Biotin protein ligase C terminal domain EE66_RS01025 PF13614 AAA domain EE66_RS01030 PF17762 HTH domain found in ParB protein EE66_RS01030 PF02195 ParB-like nuclease domain EE66_RS01040 PF00430 ATP synthase B/B' CF(0) EE66_RS01050 PF00306 ATP synthase alpha/beta chain, C terminal domain EE66_RS01050 PF02874 ATP synthase alpha/beta family, beta-barrel domain EE66_RS01050 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EE66_RS01055 PF00231 ATP synthase EE66_RS01060 PF02874 ATP synthase alpha/beta family, beta-barrel domain EE66_RS01060 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EE66_RS01065 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain EE66_RS01070 PF01618 MotA/TolQ/ExbB proton channel family EE66_RS01075 PF02472 Biopolymer transport protein ExbD/TolR EE66_RS01085 PF07676 WD40-like Beta Propeller Repeat EE66_RS01090 PF00691 OmpA family EE66_RS01100 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EE66_RS01115 PF00145 C-5 cytosine-specific DNA methylase EE66_RS01125 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EE66_RS01125 PF00460 Flagella basal body rod protein EE66_RS01125 PF07559 Flagellar basal body protein FlaE EE66_RS01145 PF17757 UvrB interaction domain EE66_RS01145 PF00271 Helicase conserved C-terminal domain EE66_RS01145 PF12344 Ultra-violet resistance protein B EE66_RS01145 PF02151 UvrB/uvrC motif EE66_RS01145 PF04851 Type III restriction enzyme, res subunit EE66_RS01155 PF00206 Lyase EE66_RS01155 PF10397 Adenylosuccinate lyase C-terminus EE66_RS01160 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EE66_RS01165 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II EE66_RS01165 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg EE66_RS01175 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase EE66_RS01195 PF08240 Alcohol dehydrogenase GroES-like domain EE66_RS01195 PF00107 Zinc-binding dehydrogenase EE66_RS01200 PF02685 Glucokinase EE66_RS01205 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase EE66_RS01210 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain EE66_RS01210 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain EE66_RS01215 PF00920 Dehydratase family EE66_RS01220 PF01081 KDPG and KHG aldolase EE66_RS01225 PF08238 Sel1 repeat EE66_RS01230 PF00106 short chain dehydrogenase EE66_RS01250 PF01370 NAD dependent epimerase/dehydratase family EE66_RS01255 PF01416 tRNA pseudouridine synthase EE66_RS01270 PF00268 Ribonucleotide reductase, small chain EE66_RS01280 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EE66_RS01300 PF00289 Biotin carboxylase, N-terminal domain EE66_RS01300 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EE66_RS01300 PF02785 Biotin carboxylase C-terminal domain EE66_RS01305 PF00364 Biotin-requiring enzyme EE66_RS01310 PF00692 dUTPase EE66_RS01320 PF04452 RNA methyltransferase EE66_RS01330 PF00762 Ferrochelatase EE66_RS01340 PF01578 Cytochrome C assembly protein EE66_RS01340 PF05140 ResB-like family EE66_RS01345 PF00852 Glycosyltransferase family 10 (fucosyltransferase) C-term EE66_RS01345 PF18025 Alpha-(1,3)-fucosyltransferase FucT N-terminal domain EE66_RS01350 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain EE66_RS01350 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase EE66_RS01355 PF17827 PrmC N-terminal domain EE66_RS01355 PF05175 Methyltransferase small domain EE66_RS01360 PF01435 Peptidase family M48 EE66_RS01385 PF00271 Helicase conserved C-terminal domain EE66_RS01385 PF17764 3′ DNA-binding domain (3′BD) EE66_RS01385 PF18074 Primosomal protein N C-terminal domain EE66_RS01385 PF00270 DEAD/DEAH box helicase EE66_RS01385 PF18319 PriA DNA helicase Cys-rich region (CRR) domain EE66_RS01390 PF13649 Methyltransferase domain EE66_RS01395 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EE66_RS01395 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EE66_RS01400 PF08534 Redoxin EE66_RS01405 PF01584 CheW-like domain EE66_RS01410 PF00072 Response regulator receiver domain EE66_RS01410 PF01584 CheW-like domain EE66_RS01410 PF02895 Signal transducing histidine kinase, homodimeric domain EE66_RS01410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EE66_RS01410 PF01627 Hpt domain EE66_RS01415 PF00072 Response regulator receiver domain EE66_RS01415 PF01584 CheW-like domain EE66_RS01425 PF01168 Alanine racemase, N-terminal domain EE66_RS01430 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase EE66_RS01435 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EE66_RS01435 PF01842 ACT domain EE66_RS01435 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EE66_RS01445 PF00575 S1 RNA binding domain EE66_RS01450 PF02401 LytB protein EE66_RS01455 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EE66_RS01460 PF03484 tRNA synthetase B5 domain EE66_RS01460 PF03147 Ferredoxin-fold anticodon binding domain EE66_RS01460 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain EE66_RS01460 PF01588 Putative tRNA binding domain EE66_RS01465 PF01409 tRNA synthetases class II core domain (F) EE66_RS01465 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain EE66_RS01470 PF01230 HIT domain EE66_RS01475 PF02347 Glycine cleavage system P-protein EE66_RS01485 PF00384 Molybdopterin oxidoreductase EE66_RS01485 PF01568 Molydopterin dinucleotide binding domain EE66_RS01485 PF18364 Molybdopterin oxidoreductase N-terminal domain EE66_RS01500 PF02540 NAD synthase EE66_RS01500 PF00958 GMP synthase C terminal domain EE66_RS01500 PF00117 Glutamine amidotransferase class-I EE66_RS01535 PF00924 Mechanosensitive ion channel EE66_RS01545 PF09334 tRNA synthetases class I (M) EE66_RS01545 PF01588 Putative tRNA binding domain EE66_RS01545 PF00133 tRNA synthetases class I (I, L, M and V) EE66_RS01555 PF08003 Protein of unknown function (DUF1698) EE66_RS01570 PF17810 Arginine decarboxylase helical bundle domain EE66_RS01570 PF17944 Arginine decarboxylase C-terminal helical extension EE66_RS01570 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EE66_RS01580 PF00924 Mechanosensitive ion channel EE66_RS01585 PF12327 FtsZ family, C-terminal domain EE66_RS01585 PF00091 Tubulin/FtsZ family, GTPase domain EE66_RS01590 PF02491 SHS2 domain inserted in FTSA EE66_RS01600 PF00202 Aminotransferase class-III EE66_RS01605 PF02686 Glu-tRNAGln amidotransferase C subunit EE66_RS01610 PF01676 Metalloenzyme superfamily EE66_RS01610 PF06415 BPG-independent PGAM N-terminus (iPGM_N) EE66_RS01620 PF02092 Glycyl-tRNA synthetase beta subunit EE66_RS01635 PF00873 AcrB/AcrD/AcrF family EE66_RS01645 PF09827 CRISPR associated protein Cas2 EE66_RS01675 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus EE66_RS01675 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus EE66_RS01680 PF02091 Glycyl-tRNA synthetase alpha subunit EE66_RS01685 PF01784 NIF3 (NGG1p interacting factor 3) EE66_RS01695 PF00534 Glycosyl transferases group 1 EE66_RS01695 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) EE66_RS01700 PF00849 RNA pseudouridylate synthase EE66_RS01705 PF01790 Prolipoprotein diacylglyceryl transferase EE66_RS01710 PF00881 Nitroreductase family EE66_RS01720 PF02464 Competence-damaged protein EE66_RS01720 PF18146 Damage-inducible protein CinA KH domain EE66_RS01720 PF00994 Probable molybdopterin binding domain EE66_RS01730 PF17848 Acetyl-coA carboxylase zinc finger domain EE66_RS01730 PF01039 Carboxyl transferase domain EE66_RS01735 PF02590 Predicted SPOUT methyltransferase EE66_RS01750 PF03553 Na+/H+ antiporter family EE66_RS01770 PF13146 TRL-like protein family EE66_RS01780 PF01042 Endoribonuclease L-PSP EE66_RS01785 PF01266 FAD dependent oxidoreductase EE66_RS01790 PF01235 Sodium:alanine symporter family EE66_RS01795 PF00842 Alanine racemase, C-terminal domain EE66_RS01795 PF01168 Alanine racemase, N-terminal domain EE66_RS01800 PF00497 Bacterial extracellular solute-binding proteins, family 3 EE66_RS01805 PF00528 Binding-protein-dependent transport system inner membrane component EE66_RS01820 PF07690 Major Facilitator Superfamily EE66_RS01840 PF01242 6-pyruvoyl tetrahydropterin synthase EE66_RS01850 PF01975 Survival protein SurE EE66_RS01855 PF00348 Polyprenyl synthetase EE66_RS01860 PF01227 GTP cyclohydrolase I EE66_RS01865 PF01435 Peptidase family M48 EE66_RS01870 PF01142 tRNA pseudouridine synthase D (TruD) EE66_RS01875 PF02132 RecR protein EE66_RS01880 PF01361 Tautomerase enzyme EE66_RS01885 PF03797 Autotransporter beta-domain EE66_RS01885 PF02691 Vacuolating cyotoxin EE66_RS01890 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EE66_RS01890 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EE66_RS01895 PF01027 Inhibitor of apoptosis-promoting Bax1 EE66_RS01900 PF02142 MGS-like domain EE66_RS01900 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EE66_RS01900 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EE66_RS01930 PF00580 UvrD/REP helicase N-terminal domain EE66_RS01930 PF13361 UvrD-like helicase C-terminal domain EE66_RS01935 PF02384 N-6 DNA Methylase EE66_RS01935 PF07669 Eco57I restriction-modification methylase EE66_RS01945 PF00460 Flagella basal body rod protein EE66_RS01945 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EE66_RS01945 PF07559 Flagellar basal body protein FlaE EE66_RS01945 PF00460 Flagella basal body rod protein EE66_RS01945 PF07559 Flagellar basal body protein FlaE EE66_RS01945 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EE66_RS01950 PF03963 Flagellar hook capping protein - N-terminal region EE66_RS01950 PF13861 FlgD Tudor-like domain EE66_RS01950 PF13860 FlgD Ig-like domain EE66_RS01960 PF01515 Phosphate acetyl/butaryl transferase EE66_RS01965 PF00871 Acetokinase family EE66_RS01985 PF02492 CobW/HypB/UreG, nucleotide-binding domain EE66_RS01990 PF01455 HupF/HypC family EE66_RS01995 PF01924 Hydrogenase formation hypA family EE66_RS02030 PF03061 Thioesterase superfamily EE66_RS02035 PF00106 short chain dehydrogenase EE66_RS02040 PF01032 FecCD transport family EE66_RS02045 PF00005 ABC transporter EE66_RS02050 PF02691 Vacuolating cyotoxin EE66_RS02055 PF09190 DALR domain EE66_RS02055 PF01406 tRNA synthetases class I (C) catalytic domain EE66_RS02060 PF03023 Lipid II flippase MurJ EE66_RS02070 PF07499 RuvA, C-terminal domain EE66_RS02070 PF01330 RuvA N terminal domain EE66_RS02090 PF02075 Crossover junction endodeoxyribonuclease RuvC EE66_RS02095 PF00593 TonB dependent receptor EE66_RS02095 PF07715 TonB-dependent Receptor Plug Domain EE66_RS02100 PF06628 Catalase-related immune-responsive EE66_RS02100 PF00199 Catalase EE66_RS02115 PF03831 PhnA domain EE66_RS02115 PF08274 PhnA Zinc-Ribbon EE66_RS02125 PF02611 CDP-diacylglycerol pyrophosphatase EE66_RS02130 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EE66_RS02130 PF07196 Flagellin hook IN motif EE66_RS02130 PF07559 Flagellar basal body protein FlaE EE66_RS02130 PF00460 Flagella basal body rod protein EE66_RS02135 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA EE66_RS02145 PF02684 Lipid-A-disaccharide synthetase EE66_RS02150 PF03449 Transcription elongation factor, N-terminal EE66_RS02150 PF01272 Transcription elongation factor, GreA/GreB, C-term EE66_RS02155 PF00692 dUTPase EE66_RS02165 PF15437 Plasminogen-binding protein pgbA C-terminal EE66_RS02170 PF03309 Type III pantothenate kinase EE66_RS02185 PF01370 NAD dependent epimerase/dehydratase family EE66_RS02190 PF00294 pfkB family carbohydrate kinase EE66_RS02190 PF01467 Cytidylyltransferase-like EE66_RS02195 PF13580 SIS domain EE66_RS02200 PF00478 IMP dehydrogenase / GMP reductase domain EE66_RS02205 PF12848 ABC transporter EE66_RS02205 PF00005 ABC transporter EE66_RS02215 PF01569 PAP2 superfamily EE66_RS02225 PF02384 N-6 DNA Methylase EE66_RS02225 PF12161 HsdM N-terminal domain EE66_RS02235 PF12008 Type I restriction and modification enzyme - subunit R C terminal EE66_RS02235 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) EE66_RS02235 PF18766 SWI2/SNF2 ATPase EE66_RS02240 PF02110 Hydroxyethylthiazole kinase family EE66_RS02245 PF08543 Phosphomethylpyrimidine kinase EE66_RS02250 PF02581 Thiamine monophosphate synthase EE66_RS02260 PF02441 Flavoprotein EE66_RS02260 PF04127 DNA / pantothenate metabolism flavoprotein EE66_RS02265 PF02719 Polysaccharide biosynthesis protein EE66_RS02290 PF00216 Bacterial DNA-binding protein EE66_RS02295 PF01926 50S ribosome-binding GTPase EE66_RS02295 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal EE66_RS02305 PF17284 Spermidine synthase tetramerisation domain EE66_RS02310 PF01121 Dephospho-CoA kinase EE66_RS02315 PF01425 Amidase EE66_RS02320 PF00478 IMP dehydrogenase / GMP reductase domain EE66_RS02320 PF00571 CBS domain EE66_RS02325 PF00119 ATP synthase A chain EE66_RS02330 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) EE66_RS02340 PF07992 Pyridine nucleotide-disulphide oxidoreductase EE66_RS02345 PF00085 Thioredoxin EE66_RS02350 PF02021 Uncharacterised protein family UPF0102 EE66_RS02355 PF03447 Homoserine dehydrogenase, NAD binding domain EE66_RS02355 PF00742 Homoserine dehydrogenase EE66_RS02355 PF01842 ACT domain EE66_RS02360 PF08459 UvrC Helix-hairpin-helix N-terminal EE66_RS02360 PF02151 UvrB/uvrC motif EE66_RS02360 PF01541 GIY-YIG catalytic domain EE66_RS02375 PF00571 CBS domain EE66_RS02375 PF00005 ABC transporter EE66_RS02380 PF04069 Substrate binding domain of ABC-type glycine betaine transport system EE66_RS02390 PF13677 Membrane MotB of proton-channel complex MotA/MotB EE66_RS02390 PF00691 OmpA family EE66_RS02395 PF01618 MotA/TolQ/ExbB proton channel family EE66_RS02400 PF00899 ThiF family EE66_RS02405 PF00753 Metallo-beta-lactamase superfamily EE66_RS02425 PF03748 Flagellar basal body-associated protein FliL EE66_RS02430 PF01648 4'-phosphopantetheinyl transferase superfamily EE66_RS02460 PF00925 GTP cyclohydrolase II EE66_RS02460 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase EE66_RS02470 PF00925 GTP cyclohydrolase II EE66_RS02480 PF02391 MoaE protein EE66_RS02485 PF00994 Probable molybdopterin binding domain EE66_RS02490 PF01967 MoaC family EE66_RS02495 PF05211 Neuraminyllactose-binding hemagglutinin precursor (NLBH) EE66_RS02505 PF05698 Bacterial trigger factor protein (TF) C-terminus EE66_RS02505 PF05697 Bacterial trigger factor protein (TF) EE66_RS02505 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EE66_RS02510 PF00574 Clp protease EE66_RS02515 PF01327 Polypeptide deformylase EE66_RS02520 PF13335 Magnesium chelatase, subunit ChlI C-terminal EE66_RS02520 PF01078 Magnesium chelatase, subunit ChlI EE66_RS02525 PF00403 Heavy-metal-associated domain EE66_RS02550 PF01043 SecA preprotein cross-linking domain EE66_RS02550 PF07517 SecA DEAD-like domain EE66_RS02550 PF02810 SEC-C motif EE66_RS02550 PF07516 SecA Wing and Scaffold domain EE66_RS02555 PF03548 Outer membrane lipoprotein carrier protein LolA EE66_RS02585 PF00330 Aconitase family (aconitate hydratase) EE66_RS02585 PF11791 Aconitate B N-terminal domain EE66_RS02585 PF06434 Aconitate hydratase 2 N-terminus EE66_RS02595 PF00696 Amino acid kinase family EE66_RS02600 PF01192 RNA polymerase Rpb6 EE66_RS02605 PF13291 ACT domain EE66_RS02605 PF04607 Region found in RelA / SpoT proteins EE66_RS02605 PF02824 TGS domain EE66_RS02610 PF01479 S4 domain EE66_RS02610 PF00579 tRNA synthetases class I (W and Y) EE66_RS02615 PF00162 Phosphoglycerate kinase EE66_RS02620 PF01520 N-acetylmuramoyl-L-alanine amidase EE66_RS02635 PF12804 MobA-like NTP transferase domain EE66_RS02665 PF00448 SRP54-type protein, GTPase domain EE66_RS02680 PF12072 Domain of unknown function (DUF3552) EE66_RS02680 PF00013 KH domain EE66_RS02680 PF01966 HD domain EE66_RS02685 PF01554 MatE EE66_RS02690 PF03553 Na+/H+ antiporter family EE66_RS02690 PF13726 Na+-H+ antiporter family EE66_RS02695 PF00795 Carbon-nitrogen hydrolase EE66_RS02705 PF00899 ThiF family EE66_RS02705 PF00581 Rhodanese-like domain EE66_RS02715 PF02561 Flagellar protein FliS EE66_RS02720 PF07195 Flagellar hook-associated protein 2 C-terminus EE66_RS02720 PF02465 Flagellar hook-associated protein 2 N-terminus EE66_RS02740 PF00005 ABC transporter EE66_RS02745 PF02390 Putative methyltransferase EE66_RS02755 PF01479 S4 domain EE66_RS02755 PF00849 RNA pseudouridylate synthase EE66_RS02765 PF01098 Cell cycle protein EE66_RS02775 PF14572 Phosphoribosyl synthetase-associated domain EE66_RS02775 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EE66_RS02780 PF01230 HIT domain EE66_RS02785 PF02875 Mur ligase family, glutamate ligase domain EE66_RS02785 PF08245 Mur ligase middle domain EE66_RS02785 PF01225 Mur ligase family, catalytic domain EE66_RS02795 PF07478 D-ala D-ala ligase C-terminus EE66_RS02795 PF01820 D-ala D-ala ligase N-terminus EE66_RS02800 PF04608 Phosphatidylglycerophosphatase A EE66_RS02805 PF00266 Aminotransferase class-V EE66_RS02810 PF00156 Phosphoribosyl transferase domain EE66_RS02815 PF04055 Radical SAM superfamily EE66_RS02815 PF00919 Uncharacterized protein family UPF0004 EE66_RS02845 PF01171 PP-loop family EE66_RS02850 PF01207 Dihydrouridine synthase (Dus) EE66_RS02865 PF03605 Anaerobic c4-dicarboxylate membrane transporter EE66_RS02870 PF00710 Asparaginase, N-terminal EE66_RS02870 PF17763 Glutaminase/Asparaginase C-terminal domain EE66_RS02890 PF01810 LysE type translocator EE66_RS02895 PF12170 DNA polymerase III tau subunit V interacting with alpha EE66_RS02895 PF12169 DNA polymerase III subunits gamma and tau domain III EE66_RS02905 PF12399 Branched-chain amino acid ATP-binding cassette transporter EE66_RS02905 PF00005 ABC transporter EE66_RS02910 PF04963 Sigma-54 factor, core binding domain EE66_RS02910 PF00309 Sigma-54 factor, Activator interacting domain (AID) EE66_RS02910 PF04552 Sigma-54, DNA binding domain EE66_RS02920 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase EE66_RS02930 PF01795 MraW methylase family EE66_RS02940 PF17760 UvrA interaction domain EE66_RS02940 PF17755 UvrA DNA-binding domain EE66_RS02940 PF00005 ABC transporter EE66_RS02945 PF00072 Response regulator receiver domain EE66_RS02945 PF00158 Sigma-54 interaction domain EE66_RS02955 PF00521 DNA gyrase/topoisomerase IV, subunit A EE66_RS02955 PF03989 DNA gyrase C-terminal domain, beta-propeller EE66_RS02960 PF01219 Prokaryotic diacylglycerol kinase EE66_RS02975 PF08882 Acetone carboxylase gamma subunit EE66_RS02980 PF02538 Hydantoinase B/oxoprolinase EE66_RS02985 PF05378 Hydantoinase/oxoprolinase N-terminal region EE66_RS02985 PF01968 Hydantoinase/oxoprolinase EE66_RS02995 PF02667 Short chain fatty acid transporter EE66_RS03000 PF01144 Coenzyme A transferase EE66_RS03005 PF01144 Coenzyme A transferase EE66_RS03010 PF00108 Thiolase, N-terminal domain EE66_RS03010 PF02803 Thiolase, C-terminal domain EE66_RS03020 PF07670 Nucleoside recognition EE66_RS03020 PF07664 Ferrous iron transport protein B C terminus EE66_RS03020 PF02421 Ferrous iron transport protein B EE66_RS03030 PF00813 FliP family EE66_RS03035 PF12804 MobA-like NTP transferase domain EE66_RS03035 PF14602 Hexapeptide repeat of succinyl-transferase EE66_RS03060 PF00317 Ribonucleotide reductase, all-alpha domain EE66_RS03060 PF02867 Ribonucleotide reductase, barrel domain EE66_RS03060 PF03477 ATP cone domain EE66_RS03065 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EE66_RS03065 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EE66_RS03075 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EE66_RS03075 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EE66_RS03080 PF18644 Phage integrase SAM-like domain EE66_RS03080 PF00589 Phage integrase family EE66_RS03085 PF00155 Aminotransferase class I and II EE66_RS03105 PF02754 Cysteine-rich domain EE66_RS03110 PF06969 HemN C-terminal domain EE66_RS03110 PF04055 Radical SAM superfamily EE66_RS03115 PF10788 Protein of unknown function (DUF2603) EE66_RS03120 PF01264 Chorismate synthase EE66_RS03125 PF00035 Double-stranded RNA binding motif EE66_RS03125 PF14622 Ribonuclease-III-like EE66_RS03130 PF00075 RNase H EE66_RS03145 PF02637 GatB domain EE66_RS03145 PF02934 GatB/GatE catalytic domain EE66_RS03155 PF04055 Radical SAM superfamily EE66_RS03160 PF01103 Surface antigen EE66_RS03160 PF07244 Surface antigen variable number repeat EE66_RS03165 PF04055 Radical SAM superfamily EE66_RS03170 PF00210 Ferritin-like domain EE66_RS03180 PF18025 Alpha-(1,3)-fucosyltransferase FucT N-terminal domain EE66_RS03180 PF00852 Glycosyltransferase family 10 (fucosyltransferase) C-term EE66_RS03190 PF00206 Lyase EE66_RS03190 PF10415 Fumarase C C-terminus EE66_RS03195 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EE66_RS03205 PF00483 Nucleotidyl transferase EE66_RS03210 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain EE66_RS03210 PF01464 Transglycosylase SLT domain EE66_RS03215 PF02325 YGGT family EE66_RS03220 PF00749 tRNA synthetases class I (E and Q), catalytic domain EE66_RS03225 PF00881 Nitroreductase family EE66_RS03230 PF13735 tRNA nucleotidyltransferase domain 2 putative EE66_RS03230 PF01743 Poly A polymerase head domain EE66_RS03230 PF12627 Probable RNA and SrmB- binding site of polymerase A EE66_RS03235 PF06508 Queuosine biosynthesis protein QueC EE66_RS03255 PF01750 Hydrogenase maturation protease EE66_RS03260 PF01292 Prokaryotic cytochrome b561 EE66_RS03265 PF00374 Nickel-dependent hydrogenase EE66_RS03270 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal EE66_RS03270 PF10518 TAT (twin-arginine translocation) pathway signal sequence EE66_RS03270 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit EE66_RS03275 PF02525 Flavodoxin-like fold EE66_RS03290 PF14602 Hexapeptide repeat of succinyl-transferase EE66_RS03290 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle EE66_RS03295 PF04551 GcpE protein EE66_RS03300 PF00155 Aminotransferase class I and II EE66_RS03305 PF08245 Mur ligase middle domain EE66_RS03305 PF02875 Mur ligase family, glutamate ligase domain EE66_RS03305 PF01225 Mur ligase family, catalytic domain EE66_RS03315 PF01713 Smr domain EE66_RS03315 PF00488 MutS domain V EE66_RS03320 PF00719 Inorganic pyrophosphatase EE66_RS03335 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) EE66_RS03345 PF00152 tRNA synthetases class II (D, K and N) EE66_RS03345 PF02938 GAD domain EE66_RS03345 PF01336 OB-fold nucleic acid binding domain EE66_RS03350 PF00072 Response regulator receiver domain EE66_RS03350 PF01584 CheW-like domain EE66_RS03355 PF00533 BRCA1 C Terminus (BRCT) domain EE66_RS03355 PF01653 NAD-dependent DNA ligase adenylation domain EE66_RS03355 PF03120 NAD-dependent DNA ligase OB-fold domain EE66_RS03365 PF00005 ABC transporter EE66_RS03385 PF00873 AcrB/AcrD/AcrF family EE66_RS03400 PF01208 Uroporphyrinogen decarboxylase (URO-D) EE66_RS03415 PF00700 Bacterial flagellin C-terminal helical region EE66_RS03415 PF07196 Flagellin hook IN motif EE66_RS03415 PF00669 Bacterial flagellin N-terminal helical region EE66_RS03420 PF00005 ABC transporter EE66_RS03425 PF00672 HAMP domain EE66_RS03425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EE66_RS03425 PF12729 Four helix bundle sensory module for signal transduction EE66_RS03430 PF00155 Aminotransferase class I and II EE66_RS03435 PF00912 Transglycosylase EE66_RS03435 PF00905 Penicillin binding protein transpeptidase domain EE66_RS03470 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EE66_RS03475 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase EE66_RS03475 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II EE66_RS03475 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg EE66_RS03495 PF04023 FeoA domain EE66_RS03500 PF00633 Helix-hairpin-helix motif EE66_RS03500 PF00730 HhH-GPD superfamily base excision DNA repair protein EE66_RS03505 PF04509 CheC-like family EE66_RS03505 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EE66_RS03540 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain EE66_RS03540 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain EE66_RS03545 PF10502 Signal peptidase, peptidase S26 EE66_RS03550 PF02163 Peptidase family M50 EE66_RS03555 PF02502 Ribose/Galactose Isomerase EE66_RS03565 PF00156 Phosphoribosyl transferase domain EE66_RS03575 PF02789 Cytosol aminopeptidase family, N-terminal domain EE66_RS03575 PF00883 Cytosol aminopeptidase family, catalytic domain EE66_RS03580 PF06071 Protein of unknown function (DUF933) EE66_RS03580 PF01926 50S ribosome-binding GTPase EE66_RS03590 PF01594 AI-2E family transporter EE66_RS03595 PF01678 Diaminopimelate epimerase EE66_RS03600 PF04224 Protein of unknown function, DUF417 EE66_RS03615 PF01165 Ribosomal protein S21 EE66_RS03625 PF00550 Phosphopantetheine attachment site EE66_RS03635 PF02801 Beta-ketoacyl synthase, C-terminal domain EE66_RS03635 PF00109 Beta-ketoacyl synthase, N-terminal domain EE66_RS03640 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit EE66_RS03660 PF00588 SpoU rRNA Methylase family EE66_RS03660 PF08032 RNA 2'-O ribose methyltransferase substrate binding EE66_RS03665 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EE66_RS03670 PF01197 Ribosomal protein L31 EE66_RS03675 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EE66_RS03675 PF07497 Rho termination factor, RNA-binding domain EE66_RS03675 PF07498 Rho termination factor, N-terminal domain EE66_RS03680 PF01177 Asp/Glu/Hydantoin racemase EE66_RS03690 PF03507 CagA exotoxin EE66_RS03710 PF03135 CagE, TrbE, VirB family, component of type IV transporter system EE66_RS03775 PF16707 Cag pathogenicity island protein S of Helicobacter pylori EE66_RS03780 PF13117 Cag pathogenicity island protein Cag12 EE66_RS03815 PF00437 Type II/IV secretion system protein EE66_RS03820 PF02534 Type IV secretory system Conjugative DNA transfer EE66_RS03855 PF01926 50S ribosome-binding GTPase EE66_RS03855 PF07650 KH domain EE66_RS03860 PF10431 C-terminal, D2-small domain, of ClpB protein EE66_RS03860 PF07724 AAA domain (Cdc48 subfamily) EE66_RS03865 PF00227 Proteasome subunit EE66_RS03870 PF01281 Ribosomal protein L9, N-terminal domain EE66_RS03870 PF03948 Ribosomal protein L9, C-terminal domain EE66_RS03880 PF03951 Glutamine synthetase, beta-Grasp domain EE66_RS03880 PF00120 Glutamine synthetase, catalytic domain EE66_RS03890 PF01113 Dihydrodipicolinate reductase, N-terminus EE66_RS03890 PF05173 Dihydrodipicolinate reductase, C-terminus EE66_RS03895 PF02913 FAD linked oxidases, C-terminal domain EE66_RS03895 PF01565 FAD binding domain EE66_RS03900 PF15436 Plasminogen-binding protein pgbA N-terminal EE66_RS03900 PF15437 Plasminogen-binding protein pgbA C-terminal EE66_RS03910 PF01464 Transglycosylase SLT domain EE66_RS03910 PF10145 Phage-related minor tail protein EE66_RS03910 PF01551 Peptidase family M23 EE66_RS03930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EE66_RS03930 PF00986 DNA gyrase B subunit, carboxyl terminus EE66_RS03930 PF00204 DNA gyrase B EE66_RS03930 PF01751 Toprim domain EE66_RS03935 PF02767 DNA polymerase III beta subunit, central domain EE66_RS03935 PF02768 DNA polymerase III beta subunit, C-terminal domain EE66_RS03935 PF00712 DNA polymerase III beta subunit, N-terminal domain EE66_RS03945 PF00209 Sodium:neurotransmitter symporter family EE66_RS03950 PF00209 Sodium:neurotransmitter symporter family EE66_RS03955 PF03061 Thioesterase superfamily EE66_RS03960 PF04359 Protein of unknown function (DUF493) EE66_RS03965 PF08245 Mur ligase middle domain EE66_RS03965 PF02875 Mur ligase family, glutamate ligase domain EE66_RS03970 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 EE66_RS03970 PF00953 Glycosyl transferase family 4 EE66_RS03980 PF00830 Ribosomal L28 family EE66_RS04025 PF00145 C-5 cytosine-specific DNA methylase EE66_RS04040 PF00009 Elongation factor Tu GTP binding domain EE66_RS04040 PF00679 Elongation factor G C-terminus EE66_RS04040 PF03144 Elongation factor Tu domain 2 EE66_RS04050 PF02384 N-6 DNA Methylase EE66_RS04055 PF00749 tRNA synthetases class I (E and Q), catalytic domain EE66_RS04060 PF08402 TOBE domain EE66_RS04060 PF00005 ABC transporter EE66_RS04080 PF00999 Sodium/hydrogen exchanger family EE66_RS04080 PF02254 TrkA-N domain EE66_RS04120 PF12161 HsdM N-terminal domain EE66_RS04120 PF02384 N-6 DNA Methylase EE66_RS04135 PF02503 Polyphosphate kinase middle domain EE66_RS04135 PF13090 Polyphosphate kinase C-terminal domain 2 EE66_RS04135 PF13089 Polyphosphate kinase N-terminal domain EE66_RS04135 PF17941 Polyphosphate kinase C-terminal domain 1 EE66_RS04140 PF01180 Dihydroorotate dehydrogenase EE66_RS04150 PF00701 Dihydrodipicolinate synthetase family EE66_RS04165 PF01066 CDP-alcohol phosphatidyltransferase EE66_RS04170 PF00324 Amino acid permease EE66_RS04175 PF13180 PDZ domain EE66_RS04175 PF17820 PDZ domain EE66_RS04180 PF02542 YgbB family EE66_RS04180 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase EE66_RS04185 PF00072 Response regulator receiver domain EE66_RS04185 PF00486 Transcriptional regulatory protein, C terminal EE66_RS04190 PF01367 5'-3' exonuclease, C-terminal SAM fold EE66_RS04190 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EE66_RS04190 PF01612 3'-5' exonuclease EE66_RS04190 PF00476 DNA polymerase family A EE66_RS04200 PF01556 DnaJ C terminal domain EE66_RS04200 PF00226 DnaJ domain EE66_RS04205 PF13411 MerR HTH family regulatory protein EE66_RS04210 PF16193 AAA C-terminal domain EE66_RS04210 PF01661 Macro domain EE66_RS04210 PF12002 MgsA AAA+ ATPase C terminal EE66_RS04210 PF05496 Holliday junction DNA helicase RuvB P-loop domain EE66_RS04215 PF01475 Ferric uptake regulator family EE66_RS04230 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EE66_RS04230 PF04509 CheC-like family EE66_RS04235 PF02154 Flagellar motor switch protein FliM EE66_RS04235 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EE66_RS04240 PF04539 Sigma-70 region 3 EE66_RS04240 PF04545 Sigma-70, region 4 EE66_RS04240 PF04542 Sigma-70 region 2 EE66_RS04250 PF10609 NUBPL iron-transfer P-loop NTPase EE66_RS04255 PF00448 SRP54-type protein, GTPase domain EE66_RS04260 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) EE66_RS04265 PF01321 Creatinase/Prolidase N-terminal domain EE66_RS04265 PF00557 Metallopeptidase family M24 EE66_RS04270 PF01220 Dehydroquinase class II EE66_RS04280 PF00312 Ribosomal protein S15 EE66_RS04285 PF00771 FHIPEP family EE66_RS04295 PF00486 Transcriptional regulatory protein, C terminal EE66_RS04295 PF00072 Response regulator receiver domain EE66_RS04300 PF00149 Calcineurin-like phosphoesterase EE66_RS04305 PF16177 Acetyl-coenzyme A synthetase N-terminus EE66_RS04305 PF00501 AMP-binding enzyme EE66_RS04305 PF13193 AMP-binding enzyme C-terminal domain EE66_RS04310 PF17384 RimP C-terminal SH3 domain EE66_RS04310 PF02576 RimP N-terminal domain EE66_RS04315 PF02033 Ribosome-binding factor A EE66_RS04320 PF00009 Elongation factor Tu GTP binding domain EE66_RS04320 PF11987 Translation-initiation factor 2 EE66_RS04320 PF04760 Translation initiation factor IF-2, N-terminal region EE66_RS04330 PF00288 GHMP kinases N terminal domain EE66_RS04340 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase EE66_RS04345 PF03775 Septum formation inhibitor MinC, C-terminal domain EE66_RS04370 PF02548 Ketopantoate hydroxymethyltransferase EE66_RS04375 PF05496 Holliday junction DNA helicase RuvB P-loop domain EE66_RS04375 PF05491 RuvB C-terminal winged helix domain EE66_RS04375 PF17864 RuvB AAA lid domain EE66_RS04385 PF00902 Sec-independent protein translocase protein (TatC) EE66_RS04390 PF02547 Queuosine biosynthesis protein EE66_RS04395 PF02527 rRNA small subunit methyltransferase G EE66_RS04420 PF00072 Response regulator receiver domain EE66_RS04430 PF01434 Peptidase family M41 EE66_RS04430 PF17862 AAA+ lid domain EE66_RS04430 PF00004 ATPase family associated with various cellular activities (AAA) EE66_RS04440 PF01066 CDP-alcohol phosphatidyltransferase EE66_RS04445 PF00403 Heavy-metal-associated domain EE66_RS04450 PF00403 Heavy-metal-associated domain EE66_RS04470 PF03824 High-affinity nickel-transport protein EE66_RS04480 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system EE66_RS04495 PF00664 ABC transporter transmembrane region EE66_RS04495 PF00005 ABC transporter EE66_RS04505 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EE66_RS04505 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EE66_RS04515 PF01479 S4 domain EE66_RS04515 PF00163 Ribosomal protein S4/S9 N-terminal domain EE66_RS04520 PF01687 Riboflavin kinase EE66_RS04520 PF06574 FAD synthetase EE66_RS04525 PF02779 Transketolase, pyrimidine binding domain EE66_RS04525 PF00456 Transketolase, thiamine diphosphate binding domain EE66_RS04525 PF02780 Transketolase, C-terminal domain EE66_RS04535 PF17854 FtsK alpha domain EE66_RS04535 PF09397 Ftsk gamma domain EE66_RS04535 PF01580 FtsK/SpoIIIE family EE66_RS04540 PF00083 Sugar (and other) transporter EE66_RS04545 PF00460 Flagella basal body rod protein EE66_RS04545 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EE66_RS04555 PF03144 Elongation factor Tu domain 2 EE66_RS04555 PF00009 Elongation factor Tu GTP binding domain EE66_RS04555 PF06421 GTP-binding protein LepA C-terminus EE66_RS04555 PF00679 Elongation factor G C-terminus EE66_RS04560 PF02779 Transketolase, pyrimidine binding domain EE66_RS04560 PF02780 Transketolase, C-terminal domain EE66_RS04560 PF13292 1-deoxy-D-xylulose-5-phosphate synthase EE66_RS04570 PF01706 FliG C-terminal domain EE66_RS04570 PF14841 FliG middle domain EE66_RS04570 PF14842 FliG N-terminal domain EE66_RS04575 PF01514 Secretory protein of YscJ/FliF family EE66_RS04575 PF08345 Flagellar M-ring protein C-terminal EE66_RS04585 PF00117 Glutamine amidotransferase class-I EE66_RS04585 PF06418 CTP synthase N-terminus EE66_RS04590 PF02272 DHHA1 domain EE66_RS04590 PF17768 RecJ OB domain EE66_RS04590 PF01368 DHH family EE66_RS04590 PF10141 Single-strand DNA-specific exonuclease, C terminal domain EE66_RS04595 PF00849 RNA pseudouridylate synthase EE66_RS04640 PF03652 Holliday junction resolvase EE66_RS04645 PF17782 DprA winged helix domain EE66_RS04645 PF02481 DNA recombination-mediator protein A EE66_RS04650 PF03776 Septum formation topological specificity factor MinE EE66_RS04655 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EE66_RS04660 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain EE66_RS04660 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain EE66_RS04670 PF02540 NAD synthase EE66_RS04675 PF02606 Tetraacyldisaccharide-1-P 4'-kinase EE66_RS04685 PF02348 Cytidylyltransferase EE66_RS04690 PF02348 Cytidylyltransferase EE66_RS04695 PF02107 Flagellar L-ring protein EE66_RS04715 PF00625 Guanylate kinase EE66_RS04720 PF02416 mttA/Hcf106 family EE66_RS04725 PF05746 DALR anticodon binding domain EE66_RS04725 PF00750 tRNA synthetases class I (R) EE66_RS04725 PF03485 Arginyl tRNA synthetase N terminal domain EE66_RS04730 PF01243 Pyridoxamine 5'-phosphate oxidase EE66_RS04730 PF10615 Protein of unknown function (DUF2470) EE66_RS04740 PF07683 Cobalamin synthesis protein cobW C-terminal domain EE66_RS04740 PF02492 CobW/HypB/UreG, nucleotide-binding domain EE66_RS04750 PF01555 DNA methylase EE66_RS04760 PF01522 Polysaccharide deacetylase EE66_RS04765 PF00795 Carbon-nitrogen hydrolase EE66_RS04780 PF00202 Aminotransferase class-III EE66_RS04795 PF01018 GTP1/OBG EE66_RS04795 PF01926 50S ribosome-binding GTPase EE66_RS04800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EE66_RS04800 PF00005 ABC transporter EE66_RS04805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EE66_RS04805 PF00005 ABC transporter EE66_RS04810 PF00528 Binding-protein-dependent transport system inner membrane component EE66_RS04810 PF12911 N-terminal TM domain of oligopeptide transport permease C EE66_RS04815 PF00528 Binding-protein-dependent transport system inner membrane component EE66_RS04820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EE66_RS04825 PF01016 Ribosomal L27 protein EE66_RS04830 PF00829 Ribosomal prokaryotic L21 protein EE66_RS04840 PF00795 Carbon-nitrogen hydrolase EE66_RS04845 PF00425 chorismate binding enzyme EE66_RS04845 PF04715 Anthranilate synthase component I, N terminal region EE66_RS04860 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EE66_RS04860 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EE66_RS04865 PF03797 Autotransporter beta-domain EE66_RS04865 PF02691 Vacuolating cyotoxin EE66_RS04880 PF00004 ATPase family associated with various cellular activities (AAA) EE66_RS04880 PF17862 AAA+ lid domain EE66_RS04880 PF06480 FtsH Extracellular EE66_RS04880 PF01434 Peptidase family M41 EE66_RS04885 PF04055 Radical SAM superfamily EE66_RS04885 PF00919 Uncharacterized protein family UPF0004 EE66_RS04895 PF01761 3-dehydroquinate synthase EE66_RS04905 PF01702 Queuine tRNA-ribosyltransferase EE66_RS04915 PF01075 Glycosyltransferase family 9 (heptosyltransferase) EE66_RS04920 PF02541 Ppx/GppA phosphatase family EE66_RS04930 PF00218 Indole-3-glycerol phosphate synthase EE66_RS04940 PF03692 Putative zinc- or iron-chelating domain EE66_RS04965 PF04055 Radical SAM superfamily EE66_RS04965 PF00919 Uncharacterized protein family UPF0004 EE66_RS04975 PF01979 Amidohydrolase family EE66_RS04980 PF01979 Amidohydrolase family EE66_RS04985 PF02683 Cytochrome C biogenesis protein transmembrane region EE66_RS04990 PF17871 AAA lid domain EE66_RS04990 PF07724 AAA domain (Cdc48 subfamily) EE66_RS04990 PF02861 Clp amino terminal domain, pathogenicity island component EE66_RS04990 PF00004 ATPase family associated with various cellular activities (AAA) EE66_RS04990 PF10431 C-terminal, D2-small domain, of ClpB protein EE66_RS04995 PF01555 DNA methylase EE66_RS05000 PF18643 BsaWI restriction endonuclease type 2 EE66_RS05005 PF13742 OB-fold nucleic acid binding domain EE66_RS05005 PF02601 Exonuclease VII, large subunit EE66_RS05010 PF02163 Peptidase family M50 EE66_RS05025 PF00709 Adenylosuccinate synthetase EE66_RS05045 PF12911 N-terminal TM domain of oligopeptide transport permease C EE66_RS05045 PF00528 Binding-protein-dependent transport system inner membrane component EE66_RS05050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EE66_RS05050 PF00005 ABC transporter EE66_RS05065 PF00271 Helicase conserved C-terminal domain EE66_RS05065 PF00270 DEAD/DEAH box helicase EE66_RS05070 PF02119 Flagellar P-ring protein EE66_RS05080 PF00512 His Kinase A (phospho-acceptor) domain EE66_RS05080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EE66_RS05085 PF00210 Ferritin-like domain EE66_RS05100 PF00348 Polyprenyl synthetase EE66_RS05105 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain EE66_RS05105 PF01488 Shikimate / quinate 5-dehydrogenase EE66_RS05105 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain EE66_RS05110 PF03129 Anticodon binding domain EE66_RS05110 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EE66_RS05110 PF04073 Aminoacyl-tRNA editing domain EE66_RS05115 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain EE66_RS05115 PF03900 Porphobilinogen deaminase, C-terminal domain EE66_RS05125 PF08238 Sel1 repeat EE66_RS05125 PF13181 Tetratricopeptide repeat EE66_RS05125 PF13176 Tetratricopeptide repeat EE66_RS05135 PF03738 Glutathionylspermidine synthase preATP-grasp EE66_RS05150 PF02348 Cytidylyltransferase EE66_RS05165 PF00916 Sulfate permease family EE66_RS05165 PF01740 STAS domain EE66_RS05175 PF01925 Sulfite exporter TauE/SafE EE66_RS05180 PF01625 Peptide methionine sulfoxide reductase EE66_RS05180 PF01641 SelR domain EE66_RS05185 PF18073 Rubredoxin metal binding domain EE66_RS05195 PF01106 NifU-like domain EE66_RS05195 PF01592 NifU-like N terminal domain EE66_RS05195 PF04324 BFD-like [2Fe-2S] binding domain EE66_RS05200 PF00266 Aminotransferase class-V EE66_RS05210 PF01161 Phosphatidylethanolamine-binding protein EE66_RS05225 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase EE66_RS05225 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain EE66_RS05225 PF13288 DXP reductoisomerase C-terminal domain EE66_RS05235 PF00939 Sodium:sulfate symporter transmembrane region EE66_RS05240 PF01134 Glucose inhibited division protein A EE66_RS05240 PF13932 GidA associated domain EE66_RS05245 PF07687 Peptidase dimerisation domain EE66_RS05245 PF01546 Peptidase family M20/M25/M40 EE66_RS05255 PF13181 Tetratricopeptide repeat EE66_RS05255 PF08238 Sel1 repeat EE66_RS05260 PF00183 Hsp90 protein EE66_RS05280 PF10609 NUBPL iron-transfer P-loop NTPase EE66_RS05280 PF01883 Iron-sulfur cluster assembly protein EE66_RS05295 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ EE66_RS05310 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EE66_RS05310 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EE66_RS05315 PF02504 Fatty acid synthesis protein EE66_RS05320 PF01783 Ribosomal L32p protein family EE66_RS05330 PF00334 Nucleoside diphosphate kinase EE66_RS05335 PF00438 S-adenosylmethionine synthetase, N-terminal domain EE66_RS05335 PF02772 S-adenosylmethionine synthetase, central domain EE66_RS05335 PF02773 S-adenosylmethionine synthetase, C-terminal domain EE66_RS05340 PF00132 Bacterial transferase hexapeptide (six repeats) EE66_RS05340 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD EE66_RS05350 PF00121 Triosephosphate isomerase EE66_RS05355 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EE66_RS05360 PF00890 FAD binding domain EE66_RS05360 PF02910 Fumarate reductase flavoprotein C-term EE66_RS05365 PF13183 4Fe-4S dicluster domain EE66_RS05365 PF13085 2Fe-2S iron-sulfur cluster binding domain EE66_RS05370 PF13091 PLD-like domain EE66_RS05375 PF03350 Uncharacterized protein family, UPF0114 EE66_RS05400 PF00464 Serine hydroxymethyltransferase EE66_RS05405 PF00152 tRNA synthetases class II (D, K and N) EE66_RS05405 PF01336 OB-fold nucleic acid binding domain EE66_RS05415 PF00795 Carbon-nitrogen hydrolase EE66_RS05420 PF00005 ABC transporter EE66_RS05425 PF03102 NeuB family EE66_RS05425 PF08666 SAF domain EE66_RS05430 PF09285 Elongation factor P, C-terminal EE66_RS05430 PF01132 Elongation factor P (EF-P) OB domain EE66_RS05430 PF08207 Elongation factor P (EF-P) KOW-like domain EE66_RS05435 PF01116 Fructose-bisphosphate aldolase class-II EE66_RS05440 PF00639 PPIC-type PPIASE domain EE66_RS05460 PF00472 RF-1 domain EE66_RS05460 PF03462 PCRF domain EE66_RS05470 PF01136 Peptidase family U32 EE66_RS05485 PF00486 Transcriptional regulatory protein, C terminal EE66_RS05485 PF00072 Response regulator receiver domain EE66_RS05495 PF00490 Delta-aminolevulinic acid dehydratase EE66_RS05500 PF01709 Transcriptional regulator EE66_RS05505 PF08238 Sel1 repeat EE66_RS05520 PF01202 Shikimate kinase EE66_RS05535 PF03952 Enolase, N-terminal domain EE66_RS05535 PF00113 Enolase, C-terminal TIM barrel domain EE66_RS05540 PF00154 recA bacterial DNA recombination protein EE66_RS05570 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EE66_RS05570 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP EE66_RS05585 PF00115 Cytochrome C and Quinol oxidase polypeptide I EE66_RS05590 PF00939 Sodium:sulfate symporter transmembrane region EE66_RS05595 PF00633 Helix-hairpin-helix motif EE66_RS05595 PF00730 HhH-GPD superfamily base excision DNA repair protein EE66_RS05595 PF14815 NUDIX domain EE66_RS05600 PF02652 L-lactate permease EE66_RS05605 PF02652 L-lactate permease EE66_RS05610 PF02754 Cysteine-rich domain EE66_RS05615 PF13183 4Fe-4S dicluster domain EE66_RS05615 PF11870 Domain of unknown function (DUF3390) EE66_RS05615 PF02589 LUD domain EE66_RS05620 PF02589 LUD domain EE66_RS05625 PF00578 AhpC/TSA family EE66_RS05640 PF01474 Class-II DAHP synthetase family EE66_RS05645 PF03222 Tryptophan/tyrosine permease family EE66_RS05650 PF03315 Serine dehydratase beta chain EE66_RS05650 PF03313 Serine dehydratase alpha chain EE66_RS05685 PF01048 Phosphorylase superfamily EE66_RS05690 PF00698 Acyl transferase domain EE66_RS05705 PF01555 DNA methylase EE66_RS05710 PF01531 Glycosyl transferase family 11 EE66_RS05725 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EE66_RS05725 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EE66_RS05735 PF00291 Pyridoxal-phosphate dependent enzyme EE66_RS05740 PF16591 Helical bimodular sensor domain EE66_RS05740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EE66_RS05740 PF00672 HAMP domain EE66_RS05745 PF02677 Epoxyqueuosine reductase QueH EE66_RS05755 PF00535 Glycosyl transferase family 2 EE66_RS05760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EE66_RS05760 PF00672 HAMP domain EE66_RS05760 PF17200 Single Cache domain 2 EE66_RS05765 PF02872 5'-nucleotidase, C-terminal domain EE66_RS05765 PF00149 Calcineurin-like phosphoesterase EE66_RS05770 PF02664 S-Ribosylhomocysteinase (LuxS) EE66_RS05775 PF01053 Cys/Met metabolism PLP-dependent enzyme EE66_RS05780 PF00291 Pyridoxal-phosphate dependent enzyme EE66_RS05785 PF00012 Hsp70 protein EE66_RS05790 PF01025 GrpE EE66_RS05815 PF07196 Flagellin hook IN motif EE66_RS05815 PF00669 Bacterial flagellin N-terminal helical region EE66_RS05815 PF00700 Bacterial flagellin C-terminal helical region EE66_RS05820 PF01131 DNA topoisomerase EE66_RS05820 PF01396 Topoisomerase DNA binding C4 zinc finger EE66_RS05820 PF01751 Toprim domain EE66_RS05825 PF04055 Radical SAM superfamily EE66_RS05840 PF02896 PEP-utilising enzyme, TIM barrel domain EE66_RS05840 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain EE66_RS05840 PF00391 PEP-utilising enzyme, mobile domain EE66_RS05850 PF03129 Anticodon binding domain EE66_RS05850 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EE66_RS05850 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EE66_RS05855 PF05198 Translation initiation factor IF-3, N-terminal domain EE66_RS05855 PF00707 Translation initiation factor IF-3, C-terminal domain EE66_RS05860 PF01632 Ribosomal protein L35 EE66_RS05865 PF00453 Ribosomal protein L20 EE66_RS05890 PF03135 CagE, TrbE, VirB family, component of type IV transporter system EE66_RS05950 PF13614 AAA domain EE66_RS05965 PF00589 Phage integrase family EE66_RS05965 PF18644 Phage integrase SAM-like domain EE66_RS06000 PF13614 AAA domain EE66_RS06025 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ EE66_RS06030 PF02534 Type IV secretory system Conjugative DNA transfer EE66_RS06085 PF01131 DNA topoisomerase EE66_RS06085 PF01751 Toprim domain EE66_RS06090 PF03135 CagE, TrbE, VirB family, component of type IV transporter system EE66_RS06150 PF07804 HipA-like C-terminal domain EE66_RS06155 PF02899 Phage integrase, N-terminal SAM-like domain EE66_RS06155 PF00589 Phage integrase family EE66_RS06160 PF04545 Sigma-70, region 4 EE66_RS06160 PF00140 Sigma-70 factor, region 1.2 EE66_RS06160 PF04539 Sigma-70 region 3 EE66_RS06160 PF04542 Sigma-70 region 2 EE66_RS06170 PF06039 Malate:quinone oxidoreductase (Mqo) EE66_RS06175 PF17402 Family of unknown function (DUF5408) EE66_RS06180 PF00572 Ribosomal protein L13 EE66_RS06185 PF00380 Ribosomal protein S9/S16 EE66_RS06190 PF17200 Single Cache domain 2 EE66_RS06190 PF00672 HAMP domain EE66_RS06190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EE66_RS06215 PF03462 PCRF domain EE66_RS06215 PF00472 RF-1 domain EE66_RS06220 PF01649 Ribosomal protein S20 EE66_RS06225 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EE66_RS06225 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EE66_RS06225 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EE66_RS06225 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EE66_RS06230 PF01252 Signal peptidase (SPase) II EE66_RS06240 PF00547 Urease, gamma subunit EE66_RS06240 PF00699 Urease beta subunit EE66_RS06245 PF00449 Urease alpha-subunit, N-terminal domain EE66_RS06245 PF01979 Amidohydrolase family EE66_RS06250 PF02293 AmiS/UreI family transporter EE66_RS06255 PF05194 UreE urease accessory protein, C-terminal domain EE66_RS06255 PF02814 UreE urease accessory protein, N-terminal domain EE66_RS06260 PF01730 UreF EE66_RS06265 PF02492 CobW/HypB/UreG, nucleotide-binding domain EE66_RS06270 PF01774 UreD urease accessory protein EE66_RS06330 PF01619 Proline dehydrogenase EE66_RS06330 PF18327 Proline utilization A proline dehydrogenase N-terminal domain EE66_RS06330 PF14850 DNA-binding domain of Proline dehydrogenase EE66_RS06330 PF00171 Aldehyde dehydrogenase family EE66_RS06335 PF00474 Sodium:solute symporter family EE66_RS06350 PF00145 C-5 cytosine-specific DNA methylase EE66_RS06350 PF01381 Helix-turn-helix EE66_RS06360 PF04371 Porphyromonas-type peptidyl-arginine deiminase EE66_RS06365 PF00708 Acylphosphatase EE66_RS06365 PF17788 HypF Kae1-like domain EE66_RS06365 PF01300 Telomere recombination EE66_RS06365 PF07503 HypF finger EE66_RS06370 PF02769 AIR synthase related protein, C-terminal domain EE66_RS06370 PF00586 AIR synthase related protein, N-terminal domain EE66_RS06375 PF01370 NAD dependent epimerase/dehydratase family EE66_RS06380 PF16363 GDP-mannose 4,6 dehydratase EE66_RS06385 PF00483 Nucleotidyl transferase EE66_RS06385 PF01050 Mannose-6-phosphate isomerase EE66_RS06420 PF02575 YbaB/EbfC DNA-binding family EE66_RS06425 PF02261 Aspartate decarboxylase EE66_RS06430 PF07724 AAA domain (Cdc48 subfamily) EE66_RS06430 PF00004 ATPase family associated with various cellular activities (AAA) EE66_RS06430 PF02861 Clp amino terminal domain, pathogenicity island component EE66_RS06430 PF10431 C-terminal, D2-small domain, of ClpB protein EE66_RS06430 PF17871 AAA lid domain EE66_RS06435 PF02617 ATP-dependent Clp protease adaptor protein ClpS EE66_RS06440 PF00582 Universal stress protein family EE66_RS06460 PF07509 Protein of unknown function (DUF1523) EE66_RS06465 PF00180 Isocitrate/isopropylmalate dehydrogenase EE66_RS06470 PF00285 Citrate synthase, C-terminal domain EE66_RS06480 PF01555 DNA methylase EE66_RS06490 PF06968 Biotin and Thiamin Synthesis associated domain EE66_RS06490 PF04055 Radical SAM superfamily EE66_RS06495 PF03631 Virulence factor BrkB EE66_RS06500 PF14489 QueF-like protein EE66_RS06525 PF00884 Sulfatase EE66_RS06525 PF08019 Phosphoethanolamine transferase EptA/EptB EE66_RS06530 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain EE66_RS06535 PF01313 Bacterial export proteins, family 3 EE66_RS06540 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EE66_RS06540 PF18269 T3SS EscN ATPase C-terminal domain EE66_RS06545 PF00437 Type II/IV secretion system protein EE66_RS06550 PF00133 tRNA synthetases class I (I, L, M and V) EE66_RS06550 PF08264 Anticodon-binding domain of tRNA EE66_RS06555 PF01479 S4 domain EE66_RS06570 PF04055 Radical SAM superfamily EE66_RS06575 PF00571 CBS domain EE66_RS06575 PF01380 SIS domain EE66_RS06580 PF00753 Metallo-beta-lactamase superfamily EE66_RS06580 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain EE66_RS06580 PF17770 Ribonuclease J C-terminal domain EE66_RS06585 PF00398 Ribosomal RNA adenine dimethylase EE66_RS06605 PF01842 ACT domain EE66_RS06605 PF00551 Formyl transferase EE66_RS06645 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EE66_RS06650 PF02599 Global regulator protein family EE66_RS06655 PF00288 GHMP kinases N terminal domain EE66_RS06660 PF01668 SmpB protein EE66_RS06665 PF01618 MotA/TolQ/ExbB proton channel family EE66_RS06670 PF02472 Biopolymer transport protein ExbD/TolR EE66_RS06675 PF00468 Ribosomal protein L34 EE66_RS06680 PF00825 Ribonuclease P EE66_RS06685 PF01809 Putative membrane protein insertion efficiency factor EE66_RS06690 PF02096 60Kd inner membrane protein EE66_RS06690 PF14849 YidC periplasmic domain EE66_RS06700 PF12631 MnmE helical domain EE66_RS06700 PF10396 GTP-binding protein TrmE N-terminus EE66_RS06700 PF01926 50S ribosome-binding GTPase EE66_RS06720 PF02169 LPP20 lipoprotein EE66_RS06730 PF00085 Thioredoxin EE66_RS06735 PF00849 RNA pseudouridylate synthase EE66_RS06735 PF01479 S4 domain EE66_RS06740 PF02811 PHP domain EE66_RS06740 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EE66_RS06740 PF14579 Helix-hairpin-helix motif EE66_RS06740 PF07733 Bacterial DNA polymerase III alpha NTPase domain EE66_RS06745 PF00034 Cytochrome c EE66_RS06745 PF03150 Di-haem cytochrome c peroxidase EE66_RS06765 PF00005 ABC transporter EE66_RS06765 PF09383 NIL domain EE66_RS06770 PF02405 Permease MlaE EE66_RS06780 PF01063 Amino-transferase class IV EE66_RS06790 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EE66_RS06790 PF00476 DNA polymerase family A EE66_RS06790 PF01367 5'-3' exonuclease, C-terminal SAM fold EE66_RS06800 PF02384 N-6 DNA Methylase EE66_RS06810 PF02223 Thymidylate kinase EE66_RS06815 PF01467 Cytidylyltransferase-like EE66_RS06820 PF02441 Flavoprotein EE66_RS06830 PF00580 UvrD/REP helicase N-terminal domain EE66_RS06830 PF13361 UvrD-like helicase C-terminal domain EE66_RS06840 PF02403 Seryl-tRNA synthetase N-terminal domain EE66_RS06840 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EE66_RS06850 PF02609 Exonuclease VII small subunit EE66_RS06855 PF01209 ubiE/COQ5 methyltransferase family EE66_RS06860 PF03653 Uncharacterised protein family (UPF0093) EE66_RS06865 PF01205 Uncharacterized protein family UPF0029 EE66_RS06865 PF09186 Domain of unknown function (DUF1949) EE66_RS06880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EE66_RS06890 PF03471 Transporter associated domain EE66_RS06890 PF01595 Cyclin M transmembrane N-terminal domain EE66_RS06890 PF00571 CBS domain EE66_RS06895 PF01384 Phosphate transporter family EE66_RS06900 PF01106 NifU-like domain EE66_RS06910 PF08245 Mur ligase middle domain EE66_RS06910 PF02875 Mur ligase family, glutamate ligase domain EE66_RS06915 PF00923 Transaldolase/Fructose-6-phosphate aldolase EE66_RS06920 PF14693 Ribosomal protein TL5, C-terminal domain EE66_RS06920 PF01386 Ribosomal L25p family EE66_RS06925 PF01195 Peptidyl-tRNA hydrolase EE66_RS06960 PF05175 Methyltransferase small domain EE66_RS06965 PF01872 RibD C-terminal domain EE66_RS06965 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EE66_RS06970 PF03616 Sodium/glutamate symporter EE66_RS06975 PF03435 Saccharopine dehydrogenase NADP binding domain EE66_RS06975 PF16653 Saccharopine dehydrogenase C-terminal domain EE66_RS06980 PF12801 4Fe-4S binding domain EE66_RS06980 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase EE66_RS06980 PF13746 4Fe-4S dicluster domain EE66_RS06985 PF02660 Glycerol-3-phosphate acyltransferase EE66_RS07005 PF03841 L-seryl-tRNA selenium transferase EE66_RS07010 PF13184 NusA-like KH domain EE66_RS07010 PF08529 NusA N-terminal domain EE66_RS07040 PF18273 Type III R-M EcoP15I C-terminal domain EE66_RS07040 PF01555 DNA methylase EE66_RS07045 PF04851 Type III restriction enzyme, res subunit EE66_RS07045 PF00271 Helicase conserved C-terminal domain EE66_RS07060 PF03372 Endonuclease/Exonuclease/phosphatase family EE66_RS07075 PF00308 Bacterial dnaA protein EE66_RS07075 PF08299 Bacterial dnaA protein helix-turn-helix EE66_RS07085 PF10398 Protein of unknown function (DUF2443) EE66_RS07090 PF01380 SIS domain EE66_RS07095 PF02511 Thymidylate synthase complementing protein EE66_RS07130 PF00491 Arginase family EE66_RS07135 PF00324 Amino acid permease EE66_RS07140 PF05222 Alanine dehydrogenase/PNT, N-terminal domain EE66_RS07140 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EE66_RS07155 PF01513 ATP-NAD kinase EE66_RS07160 PF02463 RecF/RecN/SMC N terminal domain EE66_RS07165 PF05670 NFACT protein RNA binding domain EE66_RS07190 PF00929 Exonuclease EE66_RS07190 PF02811 PHP domain EE66_RS07190 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EE66_RS07190 PF14579 Helix-hairpin-helix motif EE66_RS07190 PF14480 DNA polymerase III polC-type N-terminus I EE66_RS07190 PF11490 DNA polymerase III polC-type N-terminus II EE66_RS07190 PF07733 Bacterial DNA polymerase III alpha NTPase domain EE66_RS07195 PF00834 Ribulose-phosphate 3 epimerase family EE66_RS07200 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain EE66_RS07220 PF00889 Elongation factor TS EE66_RS07225 PF00318 Ribosomal protein S2 EE66_RS07230 PF13361 UvrD-like helicase C-terminal domain EE66_RS07230 PF00580 UvrD/REP helicase N-terminal domain EE66_RS07230 PF12705 PD-(D/E)XK nuclease superfamily EE66_RS07235 PF06965 Na+/H+ antiporter 1 EE66_RS07240 PF02699 Preprotein translocase subunit EE66_RS07245 PF02355 Protein export membrane protein EE66_RS07250 PF07549 SecD/SecF GG Motif EE66_RS07250 PF02355 Protein export membrane protein EE66_RS07260 PF13603 Leucyl-tRNA synthetase, Domain 2 EE66_RS07260 PF09334 tRNA synthetases class I (M) EE66_RS07260 PF00133 tRNA synthetases class I (I, L, M and V) EE66_RS07270 PF08245 Mur ligase middle domain EE66_RS07270 PF02875 Mur ligase family, glutamate ligase domain EE66_RS07280 PF04225 Opacity-associated protein A LysM-like domain EE66_RS07280 PF01551 Peptidase family M23 EE66_RS07290 PF00270 DEAD/DEAH box helicase EE66_RS07290 PF00271 Helicase conserved C-terminal domain EE66_RS07290 PF02559 CarD-like/TRCF domain EE66_RS07290 PF03461 TRCF domain EE66_RS07290 PF17757 UvrB interaction domain EE66_RS07295 PF00355 Rieske [2Fe-2S] domain EE66_RS07295 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal EE66_RS07300 PF00033 Cytochrome b/b6/petB EE66_RS07300 PF00032 Cytochrome b(C-terminal)/b6/petD EE66_RS07320 PF03717 Penicillin-binding Protein dimerisation domain EE66_RS07320 PF00905 Penicillin binding protein transpeptidase domain EE66_RS07325 PF02049 Flagellar hook-basal body complex protein FliE EE66_RS07330 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EE66_RS07330 PF00460 Flagella basal body rod protein EE66_RS07335 PF00460 Flagella basal body rod protein EE66_RS07340 PF01098 Cell cycle protein EE66_RS07350 PF10417 C-terminal domain of 1-Cys peroxiredoxin EE66_RS07350 PF00578 AhpC/TSA family EE66_RS07355 PF03180 NLPA lipoprotein EE66_RS07360 PF03717 Penicillin-binding Protein dimerisation domain EE66_RS07360 PF00905 Penicillin binding protein transpeptidase domain EE66_RS07370 PF01926 50S ribosome-binding GTPase EE66_RS07390 PF03330 Lytic transglycolase EE66_RS07390 PF05036 Sporulation related domain EE66_RS07395 PF01476 LysM domain EE66_RS07395 PF01464 Transglycosylase SLT domain EE66_RS07400 PF01026 TatD related DNase EE66_RS07405 PF00677 Lumazine binding domain EE66_RS07415 PF00005 ABC transporter EE66_RS07415 PF09383 NIL domain EE66_RS07420 PF00528 Binding-protein-dependent transport system inner membrane component EE66_RS07430 PF01569 PAP2 superfamily EE66_RS07435 PF00953 Glycosyl transferase family 4 EE66_RS07440 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ EE66_RS07445 PF04166 Pyridoxal phosphate biosynthetic protein PdxA EE66_RS07450 PF00814 Glycoprotease family EE66_RS07465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EE66_RS07465 PF00460 Flagella basal body rod protein EE66_RS07470 PF03981 Ubiquinol-cytochrome C chaperone EE66_RS07475 PF13099 Domain of unknown function (DUF3944) EE66_RS07475 PF03981 Ubiquinol-cytochrome C chaperone EE66_RS07480 PF01029 NusB family EE66_RS07485 PF00885 6,7-dimethyl-8-ribityllumazine synthase EE66_RS07490 PF00793 DAHP synthetase I family EE66_RS07495 PF00484 Carbonic anhydrase EE66_RS07500 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EE66_RS07505 PF02569 Pantoate-beta-alanine ligase EE66_RS07540 PF00118 TCP-1/cpn60 chaperonin family EE66_RS07545 PF00166 Chaperonin 10 Kd subunit EE66_RS07550 PF01807 CHC2 zinc finger EE66_RS07550 PF08275 DNA primase catalytic core, N-terminal domain EE66_RS07550 PF13662 Toprim domain EE66_RS07550 PF16730 DnaG-primase C-terminal, helicase-binding domain EE66_RS07590 PF01584 CheW-like domain EE66_RS07590 PF00072 Response regulator receiver domain EE66_RS07595 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EE66_RS07600 PF01569 PAP2 superfamily EE66_RS07605 PF08019 Phosphoethanolamine transferase EptA/EptB EE66_RS07605 PF00884 Sulfatase EE66_RS07620 PF01842 ACT domain EE66_RS07620 PF02153 Prephenate dehydrogenase EE66_RS07625 PF00004 ATPase family associated with various cellular activities (AAA) EE66_RS07625 PF05362 Lon protease (S16) C-terminal proteolytic domain EE66_RS07625 PF02190 ATP-dependent protease La (LON) substrate-binding domain EE66_RS07630 PF13525 Outer membrane lipoprotein EE66_RS07635 PF02623 FliW protein EE66_RS07640 PF07977 FabA-like domain EE66_RS07645 PF00132 Bacterial transferase hexapeptide (six repeats) EE66_RS07645 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 EE66_RS07650 PF10431 C-terminal, D2-small domain, of ClpB protein EE66_RS07650 PF07724 AAA domain (Cdc48 subfamily) EE66_RS07660 PF04085 rod shape-determining protein MreC EE66_RS07675 PF18755 Restriction Enzyme Adenine Methylase Associated EE66_RS07675 PF01555 DNA methylase EE66_RS07680 PF01555 DNA methylase EE66_RS07690 PF00486 Transcriptional regulatory protein, C terminal EE66_RS07690 PF00072 Response regulator receiver domain EE66_RS07695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EE66_RS07700 PF03853 YjeF-related protein N-terminus EE66_RS07700 PF01256 Carbohydrate kinase EE66_RS07705 PF00772 DnaB-like helicase N terminal domain EE66_RS07705 PF03796 DnaB-like helicase C terminal domain EE66_RS07715 PF01040 UbiA prenyltransferase family EE66_RS07730 PF02666 Phosphatidylserine decarboxylase EE66_RS07735 PF02445 Quinolinate synthetase A protein EE66_RS07740 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain EE66_RS07740 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain EE66_RS07750 PF13180 PDZ domain EE66_RS07750 PF03572 Peptidase family S41 EE66_RS07760 PF01553 Acyltransferase EE66_RS07765 PF03167 Uracil DNA glycosylase superfamily EE66_RS07770 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EE66_RS07770 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EE66_RS07775 PF00162 Phosphoglycerate kinase EE66_RS07780 PF01544 CorA-like Mg2+ transporter protein EE66_RS07785 PF03741 Integral membrane protein TerC family EE66_RS07850 PF18025 Alpha-(1,3)-fucosyltransferase FucT N-terminal domain EE66_RS07850 PF00852 Glycosyltransferase family 10 (fucosyltransferase) C-term EE66_RS07855 PF01555 DNA methylase