locus-tag class description EYC29_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix EYC29_RS00005 PF00308 Bacterial dnaA protein EYC29_RS00020 PF03372 Endonuclease/Exonuclease/phosphatase family EYC29_RS00035 PF00271 Helicase conserved C-terminal domain EYC29_RS00035 PF04851 Type III restriction enzyme, res subunit EYC29_RS00040 PF01555 DNA methylase EYC29_RS00040 PF18273 Type III R-M EcoP15I C-terminal domain EYC29_RS00050 PF04851 Type III restriction enzyme, res subunit EYC29_RS00050 PF08774 VRR-NUC domain EYC29_RS00065 PF13274 Protein of unknown function (DUF4065) EYC29_RS00075 PF08529 NusA N-terminal domain EYC29_RS00075 PF13184 NusA-like KH domain EYC29_RS00080 PF03841 L-seryl-tRNA selenium transferase EYC29_RS00100 PF02660 Glycerol-3-phosphate acyltransferase EYC29_RS00105 PF12801 4Fe-4S binding domain EYC29_RS00105 PF13746 4Fe-4S dicluster domain EYC29_RS00105 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase EYC29_RS00110 PF03435 Saccharopine dehydrogenase NADP binding domain EYC29_RS00110 PF16653 Saccharopine dehydrogenase C-terminal domain EYC29_RS00115 PF03616 Sodium/glutamate symporter EYC29_RS00120 PF01872 RibD C-terminal domain EYC29_RS00120 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EYC29_RS00125 PF05175 Methyltransferase small domain EYC29_RS00155 PF01195 Peptidyl-tRNA hydrolase EYC29_RS00160 PF14693 Ribosomal protein TL5, C-terminal domain EYC29_RS00160 PF01386 Ribosomal L25p family EYC29_RS00165 PF00923 Transaldolase/Fructose-6-phosphate aldolase EYC29_RS00170 PF02875 Mur ligase family, glutamate ligase domain EYC29_RS00170 PF08245 Mur ligase middle domain EYC29_RS00180 PF01106 NifU-like domain EYC29_RS00185 PF01384 Phosphate transporter family EYC29_RS00190 PF01595 Cyclin M transmembrane N-terminal domain EYC29_RS00190 PF03471 Transporter associated domain EYC29_RS00190 PF00571 CBS domain EYC29_RS00200 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EYC29_RS00215 PF09186 Domain of unknown function (DUF1949) EYC29_RS00215 PF01205 Uncharacterized protein family UPF0029 EYC29_RS00220 PF03653 Uncharacterised protein family (UPF0093) EYC29_RS00225 PF01209 ubiE/COQ5 methyltransferase family EYC29_RS00230 PF02609 Exonuclease VII small subunit EYC29_RS00240 PF02403 Seryl-tRNA synthetase N-terminal domain EYC29_RS00240 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EYC29_RS00250 PF00580 UvrD/REP helicase N-terminal domain EYC29_RS00250 PF13361 UvrD-like helicase C-terminal domain EYC29_RS00260 PF02441 Flavoprotein EYC29_RS00265 PF01467 Cytidylyltransferase-like EYC29_RS00270 PF02223 Thymidylate kinase EYC29_RS00280 PF02384 N-6 DNA Methylase EYC29_RS00290 PF00476 DNA polymerase family A EYC29_RS00290 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EYC29_RS00290 PF01367 5'-3' exonuclease, C-terminal SAM fold EYC29_RS00300 PF01063 Amino-transferase class IV EYC29_RS00310 PF02405 Permease MlaE EYC29_RS00315 PF09383 NIL domain EYC29_RS00315 PF00005 ABC transporter EYC29_RS00335 PF00034 Cytochrome c EYC29_RS00335 PF03150 Di-haem cytochrome c peroxidase EYC29_RS00340 PF02811 PHP domain EYC29_RS00340 PF14579 Helix-hairpin-helix motif EYC29_RS00340 PF07733 Bacterial DNA polymerase III alpha NTPase domain EYC29_RS00340 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EYC29_RS00345 PF01479 S4 domain EYC29_RS00345 PF00849 RNA pseudouridylate synthase EYC29_RS00350 PF00085 Thioredoxin EYC29_RS00360 PF02169 LPP20 lipoprotein EYC29_RS00380 PF01926 50S ribosome-binding GTPase EYC29_RS00380 PF12631 MnmE helical domain EYC29_RS00380 PF10396 GTP-binding protein TrmE N-terminus EYC29_RS00390 PF14849 YidC periplasmic domain EYC29_RS00390 PF02096 60Kd inner membrane protein EYC29_RS00395 PF01809 Putative membrane protein insertion efficiency factor EYC29_RS00400 PF00825 Ribonuclease P EYC29_RS00405 PF00468 Ribosomal protein L34 EYC29_RS00410 PF02472 Biopolymer transport protein ExbD/TolR EYC29_RS00415 PF01618 MotA/TolQ/ExbB proton channel family EYC29_RS00420 PF01668 SmpB protein EYC29_RS00425 PF00288 GHMP kinases N terminal domain EYC29_RS00430 PF02599 Global regulator protein family EYC29_RS00435 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EYC29_RS00475 PF01842 ACT domain EYC29_RS00475 PF00551 Formyl transferase EYC29_RS00490 PF00398 Ribosomal RNA adenine dimethylase EYC29_RS00495 PF17770 Ribonuclease J C-terminal domain EYC29_RS00495 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain EYC29_RS00495 PF00753 Metallo-beta-lactamase superfamily EYC29_RS00500 PF01380 SIS domain EYC29_RS00500 PF00571 CBS domain EYC29_RS00505 PF04055 Radical SAM superfamily EYC29_RS00520 PF01479 S4 domain EYC29_RS00525 PF08264 Anticodon-binding domain of tRNA EYC29_RS00525 PF00133 tRNA synthetases class I (I, L, M and V) EYC29_RS00530 PF00437 Type II/IV secretion system protein EYC29_RS00535 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EYC29_RS00535 PF18269 T3SS EscN ATPase C-terminal domain EYC29_RS00540 PF01313 Bacterial export proteins, family 3 EYC29_RS00545 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain EYC29_RS00550 PF08019 Phosphoethanolamine transferase EptA/EptB EYC29_RS00550 PF00884 Sulfatase EYC29_RS00575 PF14489 QueF-like protein EYC29_RS00610 PF00924 Mechanosensitive ion channel EYC29_RS00620 PF01797 Transposase IS200 like EYC29_RS00630 PF00091 Tubulin/FtsZ family, GTPase domain EYC29_RS00630 PF12327 FtsZ family, C-terminal domain EYC29_RS00635 PF02491 SHS2 domain inserted in FTSA EYC29_RS00645 PF00202 Aminotransferase class-III EYC29_RS00650 PF02686 Glu-tRNAGln amidotransferase C subunit EYC29_RS00655 PF01676 Metalloenzyme superfamily EYC29_RS00655 PF06415 BPG-independent PGAM N-terminus (iPGM_N) EYC29_RS00665 PF02092 Glycyl-tRNA synthetase beta subunit EYC29_RS00680 PF00873 AcrB/AcrD/AcrF family EYC29_RS00690 PF09827 CRISPR associated protein Cas2 EYC29_RS00700 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal EYC29_RS00700 PF01926 50S ribosome-binding GTPase EYC29_RS00710 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus EYC29_RS00710 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus EYC29_RS00715 PF02091 Glycyl-tRNA synthetase alpha subunit EYC29_RS00720 PF01784 NIF3 (NGG1p interacting factor 3) EYC29_RS00730 PF02390 Putative methyltransferase EYC29_RS00730 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) EYC29_RS00735 PF00849 RNA pseudouridylate synthase EYC29_RS00740 PF01790 Prolipoprotein diacylglyceryl transferase EYC29_RS00745 PF00881 Nitroreductase family EYC29_RS00755 PF00994 Probable molybdopterin binding domain EYC29_RS00755 PF02464 Competence-damaged protein EYC29_RS00755 PF18146 Damage-inducible protein CinA KH domain EYC29_RS00765 PF17848 Acetyl-coA carboxylase zinc finger domain EYC29_RS00765 PF01039 Carboxyl transferase domain EYC29_RS00770 PF02590 Predicted SPOUT methyltransferase EYC29_RS00785 PF03553 Na+/H+ antiporter family EYC29_RS00805 PF13146 TRL-like protein family EYC29_RS00815 PF01042 Endoribonuclease L-PSP EYC29_RS00820 PF01266 FAD dependent oxidoreductase EYC29_RS00825 PF01235 Sodium:alanine symporter family EYC29_RS00830 PF00842 Alanine racemase, C-terminal domain EYC29_RS00830 PF01168 Alanine racemase, N-terminal domain EYC29_RS00835 PF00497 Bacterial extracellular solute-binding proteins, family 3 EYC29_RS00840 PF00528 Binding-protein-dependent transport system inner membrane component EYC29_RS00860 PF07690 Major Facilitator Superfamily EYC29_RS00880 PF01242 6-pyruvoyl tetrahydropterin synthase EYC29_RS00890 PF01975 Survival protein SurE EYC29_RS00895 PF00348 Polyprenyl synthetase EYC29_RS00900 PF01227 GTP cyclohydrolase I EYC29_RS00905 PF01435 Peptidase family M48 EYC29_RS00910 PF01142 tRNA pseudouridine synthase D (TruD) EYC29_RS00915 PF02132 RecR protein EYC29_RS00920 PF01361 Tautomerase enzyme EYC29_RS00930 PF03797 Autotransporter beta-domain EYC29_RS00930 PF02691 Vacuolating cyotoxin EYC29_RS00935 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EYC29_RS00935 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EYC29_RS00940 PF01027 Inhibitor of apoptosis-promoting Bax1 EYC29_RS00945 PF02142 MGS-like domain EYC29_RS00945 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EYC29_RS00945 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EYC29_RS00975 PF00580 UvrD/REP helicase N-terminal domain EYC29_RS00975 PF13361 UvrD-like helicase C-terminal domain EYC29_RS00980 PF02384 N-6 DNA Methylase EYC29_RS00980 PF07669 Eco57I restriction-modification methylase EYC29_RS00990 PF07559 Flagellar basal body protein FlaE EYC29_RS00990 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EYC29_RS00990 PF00460 Flagella basal body rod protein EYC29_RS00990 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EYC29_RS00990 PF07559 Flagellar basal body protein FlaE EYC29_RS00990 PF00460 Flagella basal body rod protein EYC29_RS00995 PF03963 Flagellar hook capping protein - N-terminal region EYC29_RS00995 PF13861 FlgD Tudor-like domain EYC29_RS00995 PF13860 FlgD Ig-like domain EYC29_RS01005 PF01515 Phosphate acetyl/butaryl transferase EYC29_RS01020 PF02492 CobW/HypB/UreG, nucleotide-binding domain EYC29_RS01025 PF01455 HupF/HypC family EYC29_RS01030 PF01924 Hydrogenase formation hypA family EYC29_RS01060 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EYC29_RS01060 PF01411 tRNA synthetases class II (A) EYC29_RS01060 PF02272 DHHA1 domain EYC29_RS01065 PF02545 Maf-like protein EYC29_RS01070 PF00795 Carbon-nitrogen hydrolase EYC29_RS01075 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain EYC29_RS01075 PF00117 Glutamine amidotransferase class-I EYC29_RS01090 PF00892 EamA-like transporter family EYC29_RS01100 PF00809 Pterin binding enzyme EYC29_RS01105 PF12169 DNA polymerase III subunits gamma and tau domain III EYC29_RS01115 PF00696 Amino acid kinase family EYC29_RS01115 PF01842 ACT domain EYC29_RS01115 PF13840 ACT domain EYC29_RS01120 PF00293 NUDIX domain EYC29_RS01125 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EYC29_RS01130 PF04055 Radical SAM superfamily EYC29_RS01135 PF02537 CrcB-like protein, Camphor Resistance (CrcB) EYC29_RS01155 PF01255 Putative undecaprenyl diphosphate synthase EYC29_RS01160 PF00005 ABC transporter EYC29_RS01165 PF02843 Phosphoribosylglycinamide synthetase, C domain EYC29_RS01165 PF02844 Phosphoribosylglycinamide synthetase, N domain EYC29_RS01165 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain EYC29_RS01175 PF03968 OstA-like protein EYC29_RS01175 PF04453 LPS transport system D EYC29_RS01185 PF00013 KH domain EYC29_RS01185 PF01138 3' exoribonuclease family, domain 1 EYC29_RS01185 PF00575 S1 RNA binding domain EYC29_RS01185 PF03725 3' exoribonuclease family, domain 2 EYC29_RS01190 PF00137 ATP synthase subunit C EYC29_RS01205 PF00132 Bacterial transferase hexapeptide (six repeats) EYC29_RS01215 PF02086 D12 class N6 adenine-specific DNA methyltransferase EYC29_RS01225 PF00005 ABC transporter EYC29_RS01225 PF00664 ABC transporter transmembrane region EYC29_RS01250 PF00009 Elongation factor Tu GTP binding domain EYC29_RS01250 PF03143 Elongation factor Tu C-terminal domain EYC29_RS01250 PF03144 Elongation factor Tu domain 2 EYC29_RS01255 PF00471 Ribosomal protein L33 EYC29_RS01270 PF02357 Transcription termination factor nusG EYC29_RS01275 PF00298 Ribosomal protein L11, RNA binding domain EYC29_RS01275 PF03946 Ribosomal protein L11, N-terminal domain EYC29_RS01280 PF00687 Ribosomal protein L1p/L10e family EYC29_RS01285 PF00466 Ribosomal protein L10 EYC29_RS01290 PF00542 Ribosomal protein L7/L12 C-terminal domain EYC29_RS01290 PF16320 Ribosomal protein L7/L12 dimerisation domain EYC29_RS01295 PF05000 RNA polymerase Rpb1, domain 4 EYC29_RS01295 PF04561 RNA polymerase Rpb2, domain 2 EYC29_RS01295 PF04997 RNA polymerase Rpb1, domain 1 EYC29_RS01295 PF04983 RNA polymerase Rpb1, domain 3 EYC29_RS01295 PF04563 RNA polymerase beta subunit EYC29_RS01295 PF04565 RNA polymerase Rpb2, domain 3 EYC29_RS01295 PF10385 RNA polymerase beta subunit external 1 domain EYC29_RS01295 PF00623 RNA polymerase Rpb1, domain 2 EYC29_RS01295 PF04560 RNA polymerase Rpb2, domain 7 EYC29_RS01295 PF04998 RNA polymerase Rpb1, domain 5 EYC29_RS01295 PF00562 RNA polymerase Rpb2, domain 6 EYC29_RS01300 PF00164 Ribosomal protein S12/S23 EYC29_RS01305 PF00177 Ribosomal protein S7p/S5e EYC29_RS01310 PF03144 Elongation factor Tu domain 2 EYC29_RS01310 PF00679 Elongation factor G C-terminus EYC29_RS01310 PF14492 Elongation Factor G, domain II EYC29_RS01310 PF03764 Elongation factor G, domain IV EYC29_RS01310 PF00009 Elongation factor Tu GTP binding domain EYC29_RS01320 PF01075 Glycosyltransferase family 9 (heptosyltransferase) EYC29_RS01325 PF13393 Histidyl-tRNA synthetase EYC29_RS01325 PF03129 Anticodon binding domain EYC29_RS01330 PF01118 Semialdehyde dehydrogenase, NAD binding domain EYC29_RS01330 PF02774 Semialdehyde dehydrogenase, dimerisation domain EYC29_RS01340 PF00194 Eukaryotic-type carbonic anhydrase EYC29_RS01345 PF07690 Major Facilitator Superfamily EYC29_RS01355 PF02254 TrkA-N domain EYC29_RS01355 PF02080 TrkA-C domain EYC29_RS01355 PF00999 Sodium/hydrogen exchanger family EYC29_RS01360 PF01171 PP-loop family EYC29_RS01365 PF07690 Major Facilitator Superfamily EYC29_RS01375 PF01773 Na+ dependent nucleoside transporter N-terminus EYC29_RS01375 PF07662 Na+ dependent nucleoside transporter C-terminus EYC29_RS01380 PF01676 Metalloenzyme superfamily EYC29_RS01385 PF01048 Phosphorylase superfamily EYC29_RS01410 PF00860 Permease family EYC29_RS01415 PF07690 Major Facilitator Superfamily EYC29_RS01430 PF00005 ABC transporter EYC29_RS01435 PF00528 Binding-protein-dependent transport system inner membrane component EYC29_RS01440 PF00528 Binding-protein-dependent transport system inner membrane component EYC29_RS01445 PF02554 Carbon starvation protein CstA EYC29_RS01445 PF13722 5TM C-terminal transporter carbon starvation CstA EYC29_RS01455 PF00342 Phosphoglucose isomerase EYC29_RS01465 PF07992 Pyridine nucleotide-disulphide oxidoreductase EYC29_RS01480 PF00258 Flavodoxin EYC29_RS01485 PF02130 Uncharacterized protein family UPF0054 EYC29_RS01490 PF02661 Fic/DOC family EYC29_RS01495 PF14748 Pyrroline-5-carboxylate reductase dimerisation EYC29_RS01495 PF03807 NADP oxidoreductase coenzyme F420-dependent EYC29_RS01510 PF04101 Glycosyltransferase family 28 C-terminal domain EYC29_RS01510 PF03033 Glycosyltransferase family 28 N-terminal domain EYC29_RS01515 PF02623 FliW protein EYC29_RS01520 PF08264 Anticodon-binding domain of tRNA EYC29_RS01520 PF10458 Valyl tRNA synthetase tRNA binding arm EYC29_RS01520 PF00133 tRNA synthetases class I (I, L, M and V) EYC29_RS01525 PF02978 Signal peptide binding domain EYC29_RS01525 PF00448 SRP54-type protein, GTPase domain EYC29_RS01525 PF02881 SRP54-type protein, helical bundle domain EYC29_RS01530 PF00886 Ribosomal protein S16 EYC29_RS01540 PF01782 RimM N-terminal domain EYC29_RS01540 PF05239 PRC-barrel domain EYC29_RS01545 PF01746 tRNA (Guanine-1)-methyltransferase EYC29_RS01550 PF01245 Ribosomal protein L19 EYC29_RS01575 PF00551 Formyl transferase EYC29_RS01575 PF02911 Formyl transferase, C-terminal domain EYC29_RS01580 PF02237 Biotin protein ligase C terminal domain EYC29_RS01580 PF08279 HTH domain EYC29_RS01580 PF03099 Biotin/lipoate A/B protein ligase family EYC29_RS01585 PF13614 AAA domain EYC29_RS01590 PF02195 ParB-like nuclease domain EYC29_RS01590 PF17762 HTH domain found in ParB protein EYC29_RS01600 PF00430 ATP synthase B/B' CF(0) EYC29_RS01610 PF00306 ATP synthase alpha/beta chain, C terminal domain EYC29_RS01610 PF02874 ATP synthase alpha/beta family, beta-barrel domain EYC29_RS01610 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EYC29_RS01615 PF00231 ATP synthase EYC29_RS01620 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EYC29_RS01620 PF02874 ATP synthase alpha/beta family, beta-barrel domain EYC29_RS01625 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain EYC29_RS01630 PF01618 MotA/TolQ/ExbB proton channel family EYC29_RS01635 PF02472 Biopolymer transport protein ExbD/TolR EYC29_RS01645 PF07676 WD40-like Beta Propeller Repeat EYC29_RS01650 PF00691 OmpA family EYC29_RS01660 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EYC29_RS01675 PF00145 C-5 cytosine-specific DNA methylase EYC29_RS01685 PF07559 Flagellar basal body protein FlaE EYC29_RS01685 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EYC29_RS01685 PF00460 Flagella basal body rod protein EYC29_RS01705 PF02151 UvrB/uvrC motif EYC29_RS01705 PF04851 Type III restriction enzyme, res subunit EYC29_RS01705 PF00271 Helicase conserved C-terminal domain EYC29_RS01705 PF17757 UvrB interaction domain EYC29_RS01705 PF12344 Ultra-violet resistance protein B EYC29_RS01715 PF10397 Adenylosuccinate lyase C-terminus EYC29_RS01715 PF00206 Lyase EYC29_RS01720 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EYC29_RS01725 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg EYC29_RS01725 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II EYC29_RS01735 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase EYC29_RS01760 PF00107 Zinc-binding dehydrogenase EYC29_RS01760 PF08240 Alcohol dehydrogenase GroES-like domain EYC29_RS01765 PF02685 Glucokinase EYC29_RS01770 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase EYC29_RS01775 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain EYC29_RS01775 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain EYC29_RS01780 PF00920 Dehydratase family EYC29_RS01785 PF01081 KDPG and KHG aldolase EYC29_RS01790 PF08238 Sel1 repeat EYC29_RS01795 PF00106 short chain dehydrogenase EYC29_RS01815 PF01370 NAD dependent epimerase/dehydratase family EYC29_RS01820 PF01416 tRNA pseudouridine synthase EYC29_RS01835 PF00268 Ribonucleotide reductase, small chain EYC29_RS01845 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EYC29_RS01865 PF00289 Biotin carboxylase, N-terminal domain EYC29_RS01865 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EYC29_RS01865 PF02785 Biotin carboxylase C-terminal domain EYC29_RS01870 PF00364 Biotin-requiring enzyme EYC29_RS01875 PF00692 dUTPase EYC29_RS01885 PF04452 RNA methyltransferase EYC29_RS01895 PF00762 Ferrochelatase EYC29_RS01905 PF01578 Cytochrome C assembly protein EYC29_RS01905 PF05140 ResB-like family EYC29_RS01910 PF00852 Glycosyltransferase family 10 (fucosyltransferase) C-term EYC29_RS01910 PF18025 Alpha-(1,3)-fucosyltransferase FucT N-terminal domain EYC29_RS01915 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase EYC29_RS01915 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain EYC29_RS01920 PF17827 PrmC N-terminal domain EYC29_RS01920 PF05175 Methyltransferase small domain EYC29_RS01925 PF01435 Peptidase family M48 EYC29_RS01950 PF18319 PriA DNA helicase Cys-rich region (CRR) domain EYC29_RS01950 PF18074 Primosomal protein N C-terminal domain EYC29_RS01950 PF17764 3′ DNA-binding domain (3′BD) EYC29_RS01950 PF00270 DEAD/DEAH box helicase EYC29_RS01950 PF00271 Helicase conserved C-terminal domain EYC29_RS01955 PF13649 Methyltransferase domain EYC29_RS01960 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EYC29_RS01960 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EYC29_RS01965 PF08534 Redoxin EYC29_RS01970 PF01584 CheW-like domain EYC29_RS01975 PF01627 Hpt domain EYC29_RS01975 PF00072 Response regulator receiver domain EYC29_RS01975 PF01584 CheW-like domain EYC29_RS01975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYC29_RS01975 PF02895 Signal transducing histidine kinase, homodimeric domain EYC29_RS01980 PF00072 Response regulator receiver domain EYC29_RS01980 PF01584 CheW-like domain EYC29_RS01990 PF01168 Alanine racemase, N-terminal domain EYC29_RS01995 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase EYC29_RS02000 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EYC29_RS02000 PF01842 ACT domain EYC29_RS02000 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EYC29_RS02010 PF00575 S1 RNA binding domain EYC29_RS02015 PF02401 LytB protein EYC29_RS02020 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EYC29_RS02025 PF03147 Ferredoxin-fold anticodon binding domain EYC29_RS02025 PF03484 tRNA synthetase B5 domain EYC29_RS02025 PF01588 Putative tRNA binding domain EYC29_RS02025 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain EYC29_RS02030 PF01409 tRNA synthetases class II core domain (F) EYC29_RS02030 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain EYC29_RS02035 PF01230 HIT domain EYC29_RS02040 PF02347 Glycine cleavage system P-protein EYC29_RS02065 PF00958 GMP synthase C terminal domain EYC29_RS02065 PF02540 NAD synthase EYC29_RS02065 PF00117 Glutamine amidotransferase class-I EYC29_RS02095 PF00924 Mechanosensitive ion channel EYC29_RS02105 PF09334 tRNA synthetases class I (M) EYC29_RS02105 PF00133 tRNA synthetases class I (I, L, M and V) EYC29_RS02105 PF01588 Putative tRNA binding domain EYC29_RS02115 PF08003 Protein of unknown function (DUF1698) EYC29_RS02130 PF17810 Arginine decarboxylase helical bundle domain EYC29_RS02130 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EYC29_RS02130 PF17944 Arginine decarboxylase C-terminal helical extension EYC29_RS02150 PF11867 Domain of unknown function (DUF3387) EYC29_RS02150 PF18766 SWI2/SNF2 ATPase EYC29_RS02150 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) EYC29_RS02185 PF02254 TrkA-N domain EYC29_RS02185 PF00999 Sodium/hydrogen exchanger family EYC29_RS02205 PF00005 ABC transporter EYC29_RS02205 PF03459 TOBE domain EYC29_RS02210 PF00749 tRNA synthetases class I (E and Q), catalytic domain EYC29_RS02220 PF02384 N-6 DNA Methylase EYC29_RS02230 PF03144 Elongation factor Tu domain 2 EYC29_RS02230 PF00009 Elongation factor Tu GTP binding domain EYC29_RS02230 PF00679 Elongation factor G C-terminus EYC29_RS02250 PF00145 C-5 cytosine-specific DNA methylase EYC29_RS02315 PF00830 Ribosomal L28 family EYC29_RS02325 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 EYC29_RS02325 PF00953 Glycosyl transferase family 4 EYC29_RS02330 PF02875 Mur ligase family, glutamate ligase domain EYC29_RS02330 PF08245 Mur ligase middle domain EYC29_RS02335 PF04359 Protein of unknown function (DUF493) EYC29_RS02340 PF03061 Thioesterase superfamily EYC29_RS02345 PF00209 Sodium:neurotransmitter symporter family EYC29_RS02350 PF00209 Sodium:neurotransmitter symporter family EYC29_RS02355 PF02253 Phospholipase A1 EYC29_RS02360 PF00712 DNA polymerase III beta subunit, N-terminal domain EYC29_RS02360 PF02767 DNA polymerase III beta subunit, central domain EYC29_RS02360 PF02768 DNA polymerase III beta subunit, C-terminal domain EYC29_RS02365 PF00204 DNA gyrase B EYC29_RS02365 PF01751 Toprim domain EYC29_RS02365 PF00986 DNA gyrase B subunit, carboxyl terminus EYC29_RS02365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYC29_RS02380 PF10145 Phage-related minor tail protein EYC29_RS02380 PF01464 Transglycosylase SLT domain EYC29_RS02380 PF01551 Peptidase family M23 EYC29_RS02390 PF15437 Plasminogen-binding protein pgbA C-terminal EYC29_RS02390 PF15436 Plasminogen-binding protein pgbA N-terminal EYC29_RS02395 PF01565 FAD binding domain EYC29_RS02395 PF02913 FAD linked oxidases, C-terminal domain EYC29_RS02400 PF01113 Dihydrodipicolinate reductase, N-terminus EYC29_RS02400 PF05173 Dihydrodipicolinate reductase, C-terminus EYC29_RS02410 PF00120 Glutamine synthetase, catalytic domain EYC29_RS02410 PF03951 Glutamine synthetase, beta-Grasp domain EYC29_RS02420 PF01281 Ribosomal protein L9, N-terminal domain EYC29_RS02420 PF03948 Ribosomal protein L9, C-terminal domain EYC29_RS02425 PF00227 Proteasome subunit EYC29_RS02430 PF07724 AAA domain (Cdc48 subfamily) EYC29_RS02430 PF10431 C-terminal, D2-small domain, of ClpB protein EYC29_RS02435 PF01926 50S ribosome-binding GTPase EYC29_RS02435 PF07650 KH domain EYC29_RS02465 PF02534 Type IV secretory system Conjugative DNA transfer EYC29_RS02470 PF00437 Type II/IV secretion system protein EYC29_RS02485 PF03507 CagA exotoxin EYC29_RS02495 PF01177 Asp/Glu/Hydantoin racemase EYC29_RS02500 PF07497 Rho termination factor, RNA-binding domain EYC29_RS02500 PF07498 Rho termination factor, N-terminal domain EYC29_RS02500 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EYC29_RS02505 PF01197 Ribosomal protein L31 EYC29_RS02510 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EYC29_RS02515 PF00588 SpoU rRNA Methylase family EYC29_RS02515 PF08032 RNA 2'-O ribose methyltransferase substrate binding EYC29_RS02535 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit EYC29_RS02540 PF02801 Beta-ketoacyl synthase, C-terminal domain EYC29_RS02540 PF00109 Beta-ketoacyl synthase, N-terminal domain EYC29_RS02545 PF00550 Phosphopantetheine attachment site EYC29_RS02555 PF01165 Ribosomal protein S21 EYC29_RS02570 PF04224 Protein of unknown function, DUF417 EYC29_RS02575 PF01678 Diaminopimelate epimerase EYC29_RS02580 PF01594 AI-2E family transporter EYC29_RS02590 PF01926 50S ribosome-binding GTPase EYC29_RS02590 PF06071 Protein of unknown function (DUF933) EYC29_RS02595 PF00883 Cytosol aminopeptidase family, catalytic domain EYC29_RS02595 PF02789 Cytosol aminopeptidase family, N-terminal domain EYC29_RS02605 PF00156 Phosphoribosyl transferase domain EYC29_RS02615 PF02502 Ribose/Galactose Isomerase EYC29_RS02620 PF02163 Peptidase family M50 EYC29_RS02625 PF10502 Signal peptidase, peptidase S26 EYC29_RS02630 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain EYC29_RS02630 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain EYC29_RS02665 PF04509 CheC-like family EYC29_RS02665 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EYC29_RS02670 PF00633 Helix-hairpin-helix motif EYC29_RS02670 PF00730 HhH-GPD superfamily base excision DNA repair protein EYC29_RS02675 PF04023 FeoA domain EYC29_RS02695 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase EYC29_RS02695 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II EYC29_RS02695 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg EYC29_RS02700 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EYC29_RS02735 PF00905 Penicillin binding protein transpeptidase domain EYC29_RS02735 PF00912 Transglycosylase EYC29_RS02740 PF00155 Aminotransferase class I and II EYC29_RS02745 PF12729 Four helix bundle sensory module for signal transduction EYC29_RS02745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EYC29_RS02745 PF00672 HAMP domain EYC29_RS02750 PF00700 Bacterial flagellin C-terminal helical region EYC29_RS02750 PF07196 Flagellin hook IN motif EYC29_RS02750 PF00669 Bacterial flagellin N-terminal helical region EYC29_RS02765 PF01208 Uroporphyrinogen decarboxylase (URO-D) EYC29_RS02780 PF00873 AcrB/AcrD/AcrF family EYC29_RS02800 PF00005 ABC transporter EYC29_RS02810 PF03120 NAD-dependent DNA ligase OB-fold domain EYC29_RS02810 PF01653 NAD-dependent DNA ligase adenylation domain EYC29_RS02810 PF00533 BRCA1 C Terminus (BRCT) domain EYC29_RS02815 PF01584 CheW-like domain EYC29_RS02815 PF00072 Response regulator receiver domain EYC29_RS02820 PF01336 OB-fold nucleic acid binding domain EYC29_RS02820 PF00152 tRNA synthetases class II (D, K and N) EYC29_RS02820 PF02938 GAD domain EYC29_RS02830 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) EYC29_RS02840 PF00719 Inorganic pyrophosphatase EYC29_RS02845 PF01713 Smr domain EYC29_RS02845 PF00488 MutS domain V EYC29_RS02855 PF08245 Mur ligase middle domain EYC29_RS02855 PF02875 Mur ligase family, glutamate ligase domain EYC29_RS02855 PF01225 Mur ligase family, catalytic domain EYC29_RS02860 PF00155 Aminotransferase class I and II EYC29_RS02865 PF04551 GcpE protein EYC29_RS02870 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle EYC29_RS02870 PF14602 Hexapeptide repeat of succinyl-transferase EYC29_RS02885 PF02525 Flavodoxin-like fold EYC29_RS02890 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal EYC29_RS02890 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit EYC29_RS02890 PF10518 TAT (twin-arginine translocation) pathway signal sequence EYC29_RS02895 PF00374 Nickel-dependent hydrogenase EYC29_RS02900 PF01292 Prokaryotic cytochrome b561 EYC29_RS02905 PF01750 Hydrogenase maturation protease EYC29_RS02935 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase EYC29_RS02945 PF01795 MraW methylase family EYC29_RS02955 PF17755 UvrA DNA-binding domain EYC29_RS02955 PF17760 UvrA interaction domain EYC29_RS02975 PF00158 Sigma-54 interaction domain EYC29_RS02975 PF00072 Response regulator receiver domain EYC29_RS02985 PF03989 DNA gyrase C-terminal domain, beta-propeller EYC29_RS02985 PF00521 DNA gyrase/topoisomerase IV, subunit A EYC29_RS02990 PF01219 Prokaryotic diacylglycerol kinase EYC29_RS03000 PF08882 Acetone carboxylase gamma subunit EYC29_RS03005 PF02538 Hydantoinase B/oxoprolinase EYC29_RS03010 PF01968 Hydantoinase/oxoprolinase EYC29_RS03010 PF05378 Hydantoinase/oxoprolinase N-terminal region EYC29_RS03020 PF02667 Short chain fatty acid transporter EYC29_RS03025 PF01144 Coenzyme A transferase EYC29_RS03030 PF01144 Coenzyme A transferase EYC29_RS03035 PF00108 Thiolase, N-terminal domain EYC29_RS03035 PF02803 Thiolase, C-terminal domain EYC29_RS03045 PF07664 Ferrous iron transport protein B C terminus EYC29_RS03045 PF07670 Nucleoside recognition EYC29_RS03045 PF02421 Ferrous iron transport protein B EYC29_RS03055 PF00813 FliP family EYC29_RS03060 PF12804 MobA-like NTP transferase domain EYC29_RS03060 PF14602 Hexapeptide repeat of succinyl-transferase EYC29_RS03085 PF00317 Ribonucleotide reductase, all-alpha domain EYC29_RS03085 PF03477 ATP cone domain EYC29_RS03085 PF02867 Ribonucleotide reductase, barrel domain EYC29_RS03090 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EYC29_RS03090 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EYC29_RS03095 PF01925 Sulfite exporter TauE/SafE EYC29_RS03100 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EYC29_RS03100 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EYC29_RS03105 PF00589 Phage integrase family EYC29_RS03105 PF18644 Phage integrase SAM-like domain EYC29_RS03115 PF00155 Aminotransferase class I and II EYC29_RS03135 PF02754 Cysteine-rich domain EYC29_RS03140 PF04055 Radical SAM superfamily EYC29_RS03140 PF06969 HemN C-terminal domain EYC29_RS03145 PF10788 Protein of unknown function (DUF2603) EYC29_RS03150 PF01264 Chorismate synthase EYC29_RS03155 PF14622 Ribonuclease-III-like EYC29_RS03155 PF00035 Double-stranded RNA binding motif EYC29_RS03160 PF00075 RNase H EYC29_RS03175 PF02637 GatB domain EYC29_RS03175 PF02934 GatB/GatE catalytic domain EYC29_RS03185 PF04055 Radical SAM superfamily EYC29_RS03190 PF01103 Surface antigen EYC29_RS03190 PF07244 Surface antigen variable number repeat EYC29_RS03195 PF04055 Radical SAM superfamily EYC29_RS03200 PF00210 Ferritin-like domain EYC29_RS03220 PF10415 Fumarase C C-terminus EYC29_RS03220 PF00206 Lyase EYC29_RS03225 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EYC29_RS03235 PF00483 Nucleotidyl transferase EYC29_RS03240 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain EYC29_RS03240 PF01464 Transglycosylase SLT domain EYC29_RS03245 PF02325 YGGT family EYC29_RS03250 PF00749 tRNA synthetases class I (E and Q), catalytic domain EYC29_RS03255 PF00881 Nitroreductase family EYC29_RS03260 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EYC29_RS03260 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EYC29_RS03270 PF13735 tRNA nucleotidyltransferase domain 2 putative EYC29_RS03270 PF01743 Poly A polymerase head domain EYC29_RS03270 PF12627 Probable RNA and SrmB- binding site of polymerase A EYC29_RS03275 PF06508 Queuosine biosynthesis protein QueC EYC29_RS03285 PF04963 Sigma-54 factor, core binding domain EYC29_RS03285 PF00309 Sigma-54 factor, Activator interacting domain (AID) EYC29_RS03285 PF04552 Sigma-54, DNA binding domain EYC29_RS03290 PF00005 ABC transporter EYC29_RS03290 PF12399 Branched-chain amino acid ATP-binding cassette transporter EYC29_RS03305 PF01810 LysE type translocator EYC29_RS03320 PF17763 Glutaminase/Asparaginase C-terminal domain EYC29_RS03320 PF00710 Asparaginase, N-terminal EYC29_RS03325 PF03605 Anaerobic c4-dicarboxylate membrane transporter EYC29_RS03340 PF01207 Dihydrouridine synthase (Dus) EYC29_RS03345 PF01171 PP-loop family EYC29_RS03370 PF00919 Uncharacterized protein family UPF0004 EYC29_RS03370 PF04055 Radical SAM superfamily EYC29_RS03375 PF00156 Phosphoribosyl transferase domain EYC29_RS03380 PF00266 Aminotransferase class-V EYC29_RS03385 PF04608 Phosphatidylglycerophosphatase A EYC29_RS03390 PF01820 D-ala D-ala ligase N-terminus EYC29_RS03390 PF07478 D-ala D-ala ligase C-terminus EYC29_RS03400 PF08245 Mur ligase middle domain EYC29_RS03400 PF02875 Mur ligase family, glutamate ligase domain EYC29_RS03400 PF01225 Mur ligase family, catalytic domain EYC29_RS03405 PF01230 HIT domain EYC29_RS03410 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EYC29_RS03410 PF14572 Phosphoribosyl synthetase-associated domain EYC29_RS03420 PF01098 Cell cycle protein EYC29_RS03430 PF01479 S4 domain EYC29_RS03430 PF00849 RNA pseudouridylate synthase EYC29_RS03440 PF02390 Putative methyltransferase EYC29_RS03445 PF00005 ABC transporter EYC29_RS03465 PF07195 Flagellar hook-associated protein 2 C-terminus EYC29_RS03465 PF02465 Flagellar hook-associated protein 2 N-terminus EYC29_RS03470 PF02561 Flagellar protein FliS EYC29_RS03480 PF00899 ThiF family EYC29_RS03490 PF00795 Carbon-nitrogen hydrolase EYC29_RS03495 PF03553 Na+/H+ antiporter family EYC29_RS03495 PF13726 Na+-H+ antiporter family EYC29_RS03500 PF01554 MatE EYC29_RS03505 PF01966 HD domain EYC29_RS03505 PF00013 KH domain EYC29_RS03505 PF12072 Domain of unknown function (DUF3552) EYC29_RS03520 PF00448 SRP54-type protein, GTPase domain EYC29_RS03540 PF06463 Molybdenum Cofactor Synthesis C EYC29_RS03540 PF04055 Radical SAM superfamily EYC29_RS03550 PF01312 FlhB HrpN YscU SpaS Family EYC29_RS03560 PF01520 N-acetylmuramoyl-L-alanine amidase EYC29_RS03565 PF00162 Phosphoglycerate kinase EYC29_RS03570 PF01479 S4 domain EYC29_RS03570 PF00579 tRNA synthetases class I (W and Y) EYC29_RS03575 PF02824 TGS domain EYC29_RS03575 PF04607 Region found in RelA / SpoT proteins EYC29_RS03575 PF13291 ACT domain EYC29_RS03580 PF01192 RNA polymerase Rpb6 EYC29_RS03585 PF00696 Amino acid kinase family EYC29_RS03595 PF11791 Aconitate B N-terminal domain EYC29_RS03595 PF06434 Aconitate hydratase 2 N-terminus EYC29_RS03595 PF00330 Aconitase family (aconitate hydratase) EYC29_RS03625 PF03548 Outer membrane lipoprotein carrier protein LolA EYC29_RS03630 PF07517 SecA DEAD-like domain EYC29_RS03630 PF07516 SecA Wing and Scaffold domain EYC29_RS03630 PF01043 SecA preprotein cross-linking domain EYC29_RS03630 PF02810 SEC-C motif EYC29_RS03650 PF00403 Heavy-metal-associated domain EYC29_RS03655 PF13335 Magnesium chelatase, subunit ChlI C-terminal EYC29_RS03655 PF01078 Magnesium chelatase, subunit ChlI EYC29_RS03660 PF01327 Polypeptide deformylase EYC29_RS03665 PF00574 Clp protease EYC29_RS03670 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EYC29_RS03670 PF05698 Bacterial trigger factor protein (TF) C-terminus EYC29_RS03670 PF05697 Bacterial trigger factor protein (TF) EYC29_RS03680 PF05211 Neuraminyllactose-binding hemagglutinin precursor (NLBH) EYC29_RS03685 PF01967 MoaC family EYC29_RS03690 PF00994 Probable molybdopterin binding domain EYC29_RS03695 PF02391 MoaE protein EYC29_RS03705 PF00925 GTP cyclohydrolase II EYC29_RS03715 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase EYC29_RS03715 PF00925 GTP cyclohydrolase II EYC29_RS03745 PF01648 4'-phosphopantetheinyl transferase superfamily EYC29_RS03750 PF03748 Flagellar basal body-associated protein FliL EYC29_RS03770 PF00753 Metallo-beta-lactamase superfamily EYC29_RS03775 PF00899 ThiF family EYC29_RS03780 PF01618 MotA/TolQ/ExbB proton channel family EYC29_RS03785 PF00691 OmpA family EYC29_RS03785 PF13677 Membrane MotB of proton-channel complex MotA/MotB EYC29_RS03795 PF04069 Substrate binding domain of ABC-type glycine betaine transport system EYC29_RS03800 PF00571 CBS domain EYC29_RS03800 PF00005 ABC transporter EYC29_RS03815 PF08459 UvrC Helix-hairpin-helix N-terminal EYC29_RS03815 PF01541 GIY-YIG catalytic domain EYC29_RS03815 PF02151 UvrB/uvrC motif EYC29_RS03820 PF01842 ACT domain EYC29_RS03820 PF00742 Homoserine dehydrogenase EYC29_RS03820 PF03447 Homoserine dehydrogenase, NAD binding domain EYC29_RS03825 PF02021 Uncharacterised protein family UPF0102 EYC29_RS03830 PF00085 Thioredoxin EYC29_RS03835 PF07992 Pyridine nucleotide-disulphide oxidoreductase EYC29_RS03845 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) EYC29_RS03850 PF00119 ATP synthase A chain EYC29_RS03855 PF00571 CBS domain EYC29_RS03855 PF00478 IMP dehydrogenase / GMP reductase domain EYC29_RS03860 PF01425 Amidase EYC29_RS03865 PF01121 Dephospho-CoA kinase EYC29_RS03870 PF17284 Spermidine synthase tetramerisation domain EYC29_RS03880 PF01926 50S ribosome-binding GTPase EYC29_RS03880 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal EYC29_RS03885 PF00216 Bacterial DNA-binding protein EYC29_RS03910 PF02719 Polysaccharide biosynthesis protein EYC29_RS03915 PF02441 Flavoprotein EYC29_RS03915 PF04127 DNA / pantothenate metabolism flavoprotein EYC29_RS03925 PF02581 Thiamine monophosphate synthase EYC29_RS03930 PF08543 Phosphomethylpyrimidine kinase EYC29_RS03935 PF02110 Hydroxyethylthiazole kinase family EYC29_RS03940 PF12008 Type I restriction and modification enzyme - subunit R C terminal EYC29_RS03940 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) EYC29_RS03940 PF18766 SWI2/SNF2 ATPase EYC29_RS03950 PF02384 N-6 DNA Methylase EYC29_RS03950 PF12161 HsdM N-terminal domain EYC29_RS03955 PF00145 C-5 cytosine-specific DNA methylase EYC29_RS03965 PF01569 PAP2 superfamily EYC29_RS03975 PF00005 ABC transporter EYC29_RS03975 PF12848 ABC transporter EYC29_RS03980 PF00478 IMP dehydrogenase / GMP reductase domain EYC29_RS03985 PF13580 SIS domain EYC29_RS03990 PF00294 pfkB family carbohydrate kinase EYC29_RS03990 PF01467 Cytidylyltransferase-like EYC29_RS03995 PF01370 NAD dependent epimerase/dehydratase family EYC29_RS04010 PF03309 Type III pantothenate kinase EYC29_RS04015 PF15437 Plasminogen-binding protein pgbA C-terminal EYC29_RS04025 PF00692 dUTPase EYC29_RS04030 PF03449 Transcription elongation factor, N-terminal EYC29_RS04030 PF01272 Transcription elongation factor, GreA/GreB, C-term EYC29_RS04035 PF02684 Lipid-A-disaccharide synthetase EYC29_RS04045 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA EYC29_RS04050 PF07559 Flagellar basal body protein FlaE EYC29_RS04050 PF07196 Flagellin hook IN motif EYC29_RS04050 PF00460 Flagella basal body rod protein EYC29_RS04050 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EYC29_RS04055 PF02611 CDP-diacylglycerol pyrophosphatase EYC29_RS04060 PF08274 PhnA Zinc-Ribbon EYC29_RS04060 PF03831 PhnA domain EYC29_RS04075 PF06628 Catalase-related immune-responsive EYC29_RS04075 PF00199 Catalase EYC29_RS04080 PF07715 TonB-dependent Receptor Plug Domain EYC29_RS04080 PF00593 TonB dependent receptor EYC29_RS04085 PF02075 Crossover junction endodeoxyribonuclease RuvC EYC29_RS04100 PF07499 RuvA, C-terminal domain EYC29_RS04100 PF01330 RuvA N terminal domain EYC29_RS04110 PF03023 Lipid II flippase MurJ EYC29_RS04115 PF09190 DALR domain EYC29_RS04115 PF01406 tRNA synthetases class I (C) catalytic domain EYC29_RS04120 PF02691 Vacuolating cyotoxin EYC29_RS04125 PF00005 ABC transporter EYC29_RS04130 PF01032 FecCD transport family EYC29_RS04135 PF00106 short chain dehydrogenase EYC29_RS04140 PF03061 Thioesterase superfamily EYC29_RS04145 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ EYC29_RS04160 PF01084 Ribosomal protein S18 EYC29_RS04165 PF00436 Single-strand binding protein family EYC29_RS04170 PF01250 Ribosomal protein S6 EYC29_RS04175 PF06144 DNA polymerase III, delta subunit EYC29_RS04180 PF00773 RNB domain EYC29_RS04185 PF08501 Shikimate dehydrogenase substrate binding domain EYC29_RS04195 PF00528 Binding-protein-dependent transport system inner membrane component EYC29_RS04200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYC29_RS04205 PF00579 tRNA synthetases class I (W and Y) EYC29_RS04215 PF03840 Preprotein translocase SecG subunit EYC29_RS04220 PF01765 Ribosome recycling factor EYC29_RS04225 PF00156 Phosphoribosyl transferase domain EYC29_RS04235 PF02146 Sir2 family EYC29_RS04240 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 EYC29_RS04245 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit EYC29_RS04250 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit EYC29_RS04255 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit EYC29_RS04270 PF12838 4Fe-4S dicluster domain EYC29_RS04270 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EYC29_RS04270 PF00384 Molybdopterin oxidoreductase EYC29_RS04270 PF01568 Molydopterin dinucleotide binding domain EYC29_RS04270 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region EYC29_RS04275 PF00146 NADH dehydrogenase EYC29_RS04280 PF12838 4Fe-4S dicluster domain EYC29_RS04285 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 EYC29_RS04290 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L EYC29_RS04295 PF00361 Proton-conducting membrane transporter EYC29_RS04295 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EYC29_RS04300 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus EYC29_RS04300 PF00361 Proton-conducting membrane transporter EYC29_RS04305 PF00361 Proton-conducting membrane transporter EYC29_RS04315 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EYC29_RS04315 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EYC29_RS04315 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EYC29_RS04315 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EYC29_RS04325 PF00290 Tryptophan synthase alpha chain EYC29_RS04330 PF00291 Pyridoxal-phosphate dependent enzyme EYC29_RS04335 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase EYC29_RS04335 PF00218 Indole-3-glycerol phosphate synthase EYC29_RS04340 PF02885 Glycosyl transferase family, helical bundle domain EYC29_RS04340 PF00591 Glycosyl transferase family, a/b domain EYC29_RS04345 PF00117 Glutamine amidotransferase class-I EYC29_RS04350 PF00425 chorismate binding enzyme EYC29_RS04350 PF04715 Anthranilate synthase component I, N terminal region EYC29_RS04355 PF01075 Glycosyltransferase family 9 (heptosyltransferase) EYC29_RS04365 PF04264 YceI-like domain EYC29_RS04370 PF03070 TENA/THI-4/PQQC family EYC29_RS04375 PF04973 Nicotinamide mononucleotide transporter EYC29_RS04385 PF01196 Ribosomal protein L17 EYC29_RS04390 PF01000 RNA polymerase Rpb3/RpoA insert domain EYC29_RS04390 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain EYC29_RS04390 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain EYC29_RS04395 PF00163 Ribosomal protein S4/S9 N-terminal domain EYC29_RS04395 PF01479 S4 domain EYC29_RS04400 PF00411 Ribosomal protein S11 EYC29_RS04405 PF00416 Ribosomal protein S13/S18 EYC29_RS04410 PF00444 Ribosomal protein L36 EYC29_RS04415 PF01176 Translation initiation factor 1A / IF-1 EYC29_RS04420 PF00557 Metallopeptidase family M24 EYC29_RS04425 PF00344 SecY translocase EYC29_RS04430 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A EYC29_RS04435 PF00333 Ribosomal protein S5, N-terminal domain EYC29_RS04435 PF03719 Ribosomal protein S5, C-terminal domain EYC29_RS04440 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast EYC29_RS04445 PF00347 Ribosomal protein L6 EYC29_RS04450 PF00410 Ribosomal protein S8 EYC29_RS04455 PF00253 Ribosomal protein S14p/S29e EYC29_RS04460 PF00281 Ribosomal protein L5 EYC29_RS04460 PF00673 ribosomal L5P family C-terminus EYC29_RS04465 PF00467 KOW motif EYC29_RS04465 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 EYC29_RS04470 PF00238 Ribosomal protein L14p/L23e EYC29_RS04475 PF00366 Ribosomal protein S17 EYC29_RS04480 PF00831 Ribosomal L29 protein EYC29_RS04485 PF00252 Ribosomal protein L16p/L10e EYC29_RS04490 PF00189 Ribosomal protein S3, C-terminal domain EYC29_RS04490 PF07650 KH domain EYC29_RS04495 PF00237 Ribosomal protein L22p/L17e EYC29_RS04500 PF00203 Ribosomal protein S19 EYC29_RS04505 PF03947 Ribosomal Proteins L2, C-terminal domain EYC29_RS04505 PF00181 Ribosomal Proteins L2, RNA binding domain EYC29_RS04510 PF00276 Ribosomal protein L23 EYC29_RS04515 PF00573 Ribosomal protein L4/L1 family EYC29_RS04520 PF00297 Ribosomal protein L3 EYC29_RS04525 PF00338 Ribosomal protein S10p/S20e EYC29_RS04540 PF01351 Ribonuclease HII EYC29_RS04550 PF10415 Fumarase C C-terminus EYC29_RS04550 PF00206 Lyase EYC29_RS04565 PF00529 HlyD membrane-fusion protein of T1SS EYC29_RS04565 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EYC29_RS04570 PF00873 AcrB/AcrD/AcrF family EYC29_RS04575 PF05437 Branched-chain amino acid transport protein (AzlD) EYC29_RS04580 PF03591 AzlC protein EYC29_RS04585 PF00684 DnaJ central domain EYC29_RS04585 PF00226 DnaJ domain EYC29_RS04585 PF01556 DnaJ C terminal domain EYC29_RS04605 PF01467 Cytidylyltransferase-like EYC29_RS04610 PF01402 Ribbon-helix-helix protein, copG family EYC29_RS04610 PF08753 NikR C terminal nickel binding domain EYC29_RS04615 PF01618 MotA/TolQ/ExbB proton channel family EYC29_RS04620 PF02472 Biopolymer transport protein ExbD/TolR EYC29_RS04625 PF03544 Gram-negative bacterial TonB protein C-terminal EYC29_RS04635 PF04371 Porphyromonas-type peptidyl-arginine deiminase EYC29_RS04640 PF17788 HypF Kae1-like domain EYC29_RS04640 PF01300 Telomere recombination EYC29_RS04640 PF00708 Acylphosphatase EYC29_RS04640 PF07503 HypF finger EYC29_RS04645 PF02769 AIR synthase related protein, C-terminal domain EYC29_RS04645 PF00586 AIR synthase related protein, N-terminal domain EYC29_RS04655 PF01370 NAD dependent epimerase/dehydratase family EYC29_RS04660 PF16363 GDP-mannose 4,6 dehydratase EYC29_RS04665 PF01050 Mannose-6-phosphate isomerase EYC29_RS04665 PF00483 Nucleotidyl transferase EYC29_RS04700 PF02575 YbaB/EbfC DNA-binding family EYC29_RS04705 PF02261 Aspartate decarboxylase EYC29_RS04710 PF02861 Clp amino terminal domain, pathogenicity island component EYC29_RS04710 PF17871 AAA lid domain EYC29_RS04710 PF07724 AAA domain (Cdc48 subfamily) EYC29_RS04710 PF00004 ATPase family associated with various cellular activities (AAA) EYC29_RS04710 PF10431 C-terminal, D2-small domain, of ClpB protein EYC29_RS04715 PF02617 ATP-dependent Clp protease adaptor protein ClpS EYC29_RS04720 PF00582 Universal stress protein family EYC29_RS04735 PF07509 Protein of unknown function (DUF1523) EYC29_RS04740 PF00180 Isocitrate/isopropylmalate dehydrogenase EYC29_RS04745 PF00285 Citrate synthase, C-terminal domain EYC29_RS04755 PF01555 DNA methylase EYC29_RS04760 PF04851 Type III restriction enzyme, res subunit EYC29_RS04765 PF04055 Radical SAM superfamily EYC29_RS04765 PF06968 Biotin and Thiamin Synthesis associated domain EYC29_RS04770 PF03631 Virulence factor BrkB EYC29_RS04845 PF02384 N-6 DNA Methylase EYC29_RS04845 PF12161 HsdM N-terminal domain EYC29_RS04860 PF13089 Polyphosphate kinase N-terminal domain EYC29_RS04860 PF17941 Polyphosphate kinase C-terminal domain 1 EYC29_RS04860 PF13090 Polyphosphate kinase C-terminal domain 2 EYC29_RS04860 PF02503 Polyphosphate kinase middle domain EYC29_RS04865 PF01180 Dihydroorotate dehydrogenase EYC29_RS04875 PF00701 Dihydrodipicolinate synthetase family EYC29_RS04890 PF01066 CDP-alcohol phosphatidyltransferase EYC29_RS04895 PF00324 Amino acid permease EYC29_RS04900 PF13180 PDZ domain EYC29_RS04900 PF17820 PDZ domain EYC29_RS04905 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase EYC29_RS04905 PF02542 YgbB family EYC29_RS04910 PF00486 Transcriptional regulatory protein, C terminal EYC29_RS04910 PF00072 Response regulator receiver domain EYC29_RS04915 PF01612 3'-5' exonuclease EYC29_RS04915 PF00476 DNA polymerase family A EYC29_RS04915 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EYC29_RS04915 PF01367 5'-3' exonuclease, C-terminal SAM fold EYC29_RS04925 PF00226 DnaJ domain EYC29_RS04925 PF01556 DnaJ C terminal domain EYC29_RS04930 PF13411 MerR HTH family regulatory protein EYC29_RS04935 PF16193 AAA C-terminal domain EYC29_RS04935 PF01661 Macro domain EYC29_RS04935 PF12002 MgsA AAA+ ATPase C terminal EYC29_RS04935 PF05496 Holliday junction DNA helicase RuvB P-loop domain EYC29_RS04940 PF01475 Ferric uptake regulator family EYC29_RS04955 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EYC29_RS04955 PF04509 CheC-like family EYC29_RS04960 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EYC29_RS04960 PF02154 Flagellar motor switch protein FliM EYC29_RS04965 PF04539 Sigma-70 region 3 EYC29_RS04965 PF04545 Sigma-70, region 4 EYC29_RS04965 PF04542 Sigma-70 region 2 EYC29_RS04975 PF10609 NUBPL iron-transfer P-loop NTPase EYC29_RS04980 PF00448 SRP54-type protein, GTPase domain EYC29_RS04985 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) EYC29_RS04990 PF01321 Creatinase/Prolidase N-terminal domain EYC29_RS04990 PF00557 Metallopeptidase family M24 EYC29_RS04995 PF01220 Dehydroquinase class II EYC29_RS05005 PF00312 Ribosomal protein S15 EYC29_RS05010 PF00771 FHIPEP family EYC29_RS05020 PF00486 Transcriptional regulatory protein, C terminal EYC29_RS05020 PF00072 Response regulator receiver domain EYC29_RS05025 PF00149 Calcineurin-like phosphoesterase EYC29_RS05030 PF00501 AMP-binding enzyme EYC29_RS05030 PF16177 Acetyl-coenzyme A synthetase N-terminus EYC29_RS05030 PF13193 AMP-binding enzyme C-terminal domain EYC29_RS05035 PF17384 RimP C-terminal SH3 domain EYC29_RS05035 PF02576 RimP N-terminal domain EYC29_RS05040 PF02033 Ribosome-binding factor A EYC29_RS05045 PF00009 Elongation factor Tu GTP binding domain EYC29_RS05045 PF04760 Translation initiation factor IF-2, N-terminal region EYC29_RS05045 PF11987 Translation-initiation factor 2 EYC29_RS05055 PF00288 GHMP kinases N terminal domain EYC29_RS05065 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase EYC29_RS05070 PF03775 Septum formation inhibitor MinC, C-terminal domain EYC29_RS05095 PF02548 Ketopantoate hydroxymethyltransferase EYC29_RS05100 PF17864 RuvB AAA lid domain EYC29_RS05100 PF05496 Holliday junction DNA helicase RuvB P-loop domain EYC29_RS05100 PF05491 RuvB C-terminal winged helix domain EYC29_RS05110 PF00902 Sec-independent protein translocase protein (TatC) EYC29_RS05115 PF02547 Queuosine biosynthesis protein EYC29_RS05120 PF02527 rRNA small subunit methyltransferase G EYC29_RS05145 PF00072 Response regulator receiver domain EYC29_RS05155 PF00004 ATPase family associated with various cellular activities (AAA) EYC29_RS05155 PF01434 Peptidase family M41 EYC29_RS05155 PF17862 AAA+ lid domain EYC29_RS05165 PF01066 CDP-alcohol phosphatidyltransferase EYC29_RS05170 PF00403 Heavy-metal-associated domain EYC29_RS05175 PF00403 Heavy-metal-associated domain EYC29_RS05195 PF03824 High-affinity nickel-transport protein EYC29_RS05205 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system EYC29_RS05220 PF00005 ABC transporter EYC29_RS05220 PF00664 ABC transporter transmembrane region EYC29_RS05230 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EYC29_RS05230 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EYC29_RS05240 PF01479 S4 domain EYC29_RS05240 PF01728 FtsJ-like methyltransferase EYC29_RS05245 PF01687 Riboflavin kinase EYC29_RS05245 PF06574 FAD synthetase EYC29_RS05250 PF02779 Transketolase, pyrimidine binding domain EYC29_RS05250 PF02780 Transketolase, C-terminal domain EYC29_RS05250 PF00456 Transketolase, thiamine diphosphate binding domain EYC29_RS05260 PF17854 FtsK alpha domain EYC29_RS05260 PF09397 Ftsk gamma domain EYC29_RS05260 PF01580 FtsK/SpoIIIE family EYC29_RS05265 PF00083 Sugar (and other) transporter EYC29_RS05270 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EYC29_RS05270 PF00460 Flagella basal body rod protein EYC29_RS05280 PF00679 Elongation factor G C-terminus EYC29_RS05280 PF00009 Elongation factor Tu GTP binding domain EYC29_RS05280 PF06421 GTP-binding protein LepA C-terminus EYC29_RS05280 PF03144 Elongation factor Tu domain 2 EYC29_RS05285 PF02780 Transketolase, C-terminal domain EYC29_RS05285 PF13292 1-deoxy-D-xylulose-5-phosphate synthase EYC29_RS05285 PF02779 Transketolase, pyrimidine binding domain EYC29_RS05295 PF01706 FliG C-terminal domain EYC29_RS05295 PF14841 FliG middle domain EYC29_RS05295 PF14842 FliG N-terminal domain EYC29_RS05300 PF01514 Secretory protein of YscJ/FliF family EYC29_RS05300 PF08345 Flagellar M-ring protein C-terminal EYC29_RS05310 PF00117 Glutamine amidotransferase class-I EYC29_RS05310 PF06418 CTP synthase N-terminus EYC29_RS05315 PF10141 Single-strand DNA-specific exonuclease, C terminal domain EYC29_RS05315 PF02272 DHHA1 domain EYC29_RS05315 PF01368 DHH family EYC29_RS05315 PF17768 RecJ OB domain EYC29_RS05320 PF00849 RNA pseudouridylate synthase EYC29_RS05360 PF08238 Sel1 repeat EYC29_RS05365 PF03652 Holliday junction resolvase EYC29_RS05370 PF17782 DprA winged helix domain EYC29_RS05370 PF02481 DNA recombination-mediator protein A EYC29_RS05375 PF03776 Septum formation topological specificity factor MinE EYC29_RS05380 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EYC29_RS05385 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain EYC29_RS05385 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain EYC29_RS05395 PF02540 NAD synthase EYC29_RS05400 PF02606 Tetraacyldisaccharide-1-P 4'-kinase EYC29_RS05410 PF02348 Cytidylyltransferase EYC29_RS05415 PF02348 Cytidylyltransferase EYC29_RS05420 PF02107 Flagellar L-ring protein EYC29_RS05440 PF00625 Guanylate kinase EYC29_RS05445 PF02416 mttA/Hcf106 family EYC29_RS05450 PF00750 tRNA synthetases class I (R) EYC29_RS05450 PF03485 Arginyl tRNA synthetase N terminal domain EYC29_RS05450 PF05746 DALR anticodon binding domain EYC29_RS05455 PF10615 Protein of unknown function (DUF2470) EYC29_RS05455 PF01243 Pyridoxamine 5'-phosphate oxidase EYC29_RS05465 PF02492 CobW/HypB/UreG, nucleotide-binding domain EYC29_RS05465 PF07683 Cobalamin synthesis protein cobW C-terminal domain EYC29_RS05475 PF01555 DNA methylase EYC29_RS05485 PF01522 Polysaccharide deacetylase EYC29_RS05490 PF00795 Carbon-nitrogen hydrolase EYC29_RS05505 PF00202 Aminotransferase class-III EYC29_RS05520 PF01926 50S ribosome-binding GTPase EYC29_RS05520 PF01018 GTP1/OBG EYC29_RS05525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYC29_RS05525 PF00005 ABC transporter EYC29_RS05530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYC29_RS05530 PF00005 ABC transporter EYC29_RS05535 PF00528 Binding-protein-dependent transport system inner membrane component EYC29_RS05535 PF12911 N-terminal TM domain of oligopeptide transport permease C EYC29_RS05540 PF00528 Binding-protein-dependent transport system inner membrane component EYC29_RS05545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYC29_RS05550 PF01016 Ribosomal L27 protein EYC29_RS05555 PF00829 Ribosomal prokaryotic L21 protein EYC29_RS05565 PF00795 Carbon-nitrogen hydrolase EYC29_RS05570 PF00425 chorismate binding enzyme EYC29_RS05570 PF04715 Anthranilate synthase component I, N terminal region EYC29_RS05585 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EYC29_RS05585 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EYC29_RS05605 PF01434 Peptidase family M41 EYC29_RS05605 PF17862 AAA+ lid domain EYC29_RS05605 PF00004 ATPase family associated with various cellular activities (AAA) EYC29_RS05610 PF00919 Uncharacterized protein family UPF0004 EYC29_RS05610 PF04055 Radical SAM superfamily EYC29_RS05620 PF01761 3-dehydroquinate synthase EYC29_RS05630 PF01702 Queuine tRNA-ribosyltransferase EYC29_RS05640 PF01075 Glycosyltransferase family 9 (heptosyltransferase) EYC29_RS05645 PF02541 Ppx/GppA phosphatase family EYC29_RS05655 PF00218 Indole-3-glycerol phosphate synthase EYC29_RS05665 PF03692 Putative zinc- or iron-chelating domain EYC29_RS05690 PF04055 Radical SAM superfamily EYC29_RS05690 PF00919 Uncharacterized protein family UPF0004 EYC29_RS05700 PF01979 Amidohydrolase family EYC29_RS05705 PF01979 Amidohydrolase family EYC29_RS05710 PF02683 Cytochrome C biogenesis protein transmembrane region EYC29_RS05715 PF17871 AAA lid domain EYC29_RS05715 PF07724 AAA domain (Cdc48 subfamily) EYC29_RS05715 PF00004 ATPase family associated with various cellular activities (AAA) EYC29_RS05715 PF10431 C-terminal, D2-small domain, of ClpB protein EYC29_RS05715 PF02861 Clp amino terminal domain, pathogenicity island component EYC29_RS05720 PF01555 DNA methylase EYC29_RS05725 PF18643 BsaWI restriction endonuclease type 2 EYC29_RS05735 PF01555 DNA methylase EYC29_RS05735 PF18273 Type III R-M EcoP15I C-terminal domain EYC29_RS05740 PF02601 Exonuclease VII, large subunit EYC29_RS05740 PF13742 OB-fold nucleic acid binding domain EYC29_RS05745 PF02163 Peptidase family M50 EYC29_RS05760 PF00709 Adenylosuccinate synthetase EYC29_RS05780 PF12911 N-terminal TM domain of oligopeptide transport permease C EYC29_RS05780 PF00528 Binding-protein-dependent transport system inner membrane component EYC29_RS05800 PF00271 Helicase conserved C-terminal domain EYC29_RS05800 PF00270 DEAD/DEAH box helicase EYC29_RS05805 PF02119 Flagellar P-ring protein EYC29_RS05815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYC29_RS05815 PF00512 His Kinase A (phospho-acceptor) domain EYC29_RS05820 PF00210 Ferritin-like domain EYC29_RS05835 PF00348 Polyprenyl synthetase EYC29_RS05840 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain EYC29_RS05840 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain EYC29_RS05840 PF01488 Shikimate / quinate 5-dehydrogenase EYC29_RS05845 PF03129 Anticodon binding domain EYC29_RS05845 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EYC29_RS05845 PF04073 Aminoacyl-tRNA editing domain EYC29_RS05850 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain EYC29_RS05850 PF03900 Porphobilinogen deaminase, C-terminal domain EYC29_RS05860 PF13181 Tetratricopeptide repeat EYC29_RS05860 PF13176 Tetratricopeptide repeat EYC29_RS05860 PF08238 Sel1 repeat EYC29_RS05870 PF03738 Glutathionylspermidine synthase preATP-grasp EYC29_RS05885 PF02348 Cytidylyltransferase EYC29_RS05900 PF00916 Sulfate permease family EYC29_RS05900 PF01740 STAS domain EYC29_RS05910 PF01925 Sulfite exporter TauE/SafE EYC29_RS05920 PF01625 Peptide methionine sulfoxide reductase EYC29_RS05920 PF01641 SelR domain EYC29_RS05925 PF18073 Rubredoxin metal binding domain EYC29_RS05935 PF01592 NifU-like N terminal domain EYC29_RS05935 PF01106 NifU-like domain EYC29_RS05935 PF04324 BFD-like [2Fe-2S] binding domain EYC29_RS05940 PF00266 Aminotransferase class-V EYC29_RS05950 PF01161 Phosphatidylethanolamine-binding protein EYC29_RS05955 PF13288 DXP reductoisomerase C-terminal domain EYC29_RS05955 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain EYC29_RS05955 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase EYC29_RS05965 PF00939 Sodium:sulfate symporter transmembrane region EYC29_RS05970 PF13932 GidA associated domain EYC29_RS05970 PF01134 Glucose inhibited division protein A EYC29_RS05975 PF01546 Peptidase family M20/M25/M40 EYC29_RS05975 PF07687 Peptidase dimerisation domain EYC29_RS05980 PF13181 Tetratricopeptide repeat EYC29_RS05980 PF08238 Sel1 repeat EYC29_RS05985 PF00183 Hsp90 protein EYC29_RS06000 PF01883 Iron-sulfur cluster assembly protein EYC29_RS06000 PF10609 NUBPL iron-transfer P-loop NTPase EYC29_RS06020 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EYC29_RS06020 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EYC29_RS06025 PF02504 Fatty acid synthesis protein EYC29_RS06030 PF01783 Ribosomal L32p protein family EYC29_RS06040 PF00334 Nucleoside diphosphate kinase EYC29_RS06045 PF02773 S-adenosylmethionine synthetase, C-terminal domain EYC29_RS06045 PF00438 S-adenosylmethionine synthetase, N-terminal domain EYC29_RS06045 PF02772 S-adenosylmethionine synthetase, central domain EYC29_RS06050 PF00132 Bacterial transferase hexapeptide (six repeats) EYC29_RS06050 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD EYC29_RS06060 PF00121 Triosephosphate isomerase EYC29_RS06065 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EYC29_RS06070 PF00890 FAD binding domain EYC29_RS06070 PF02910 Fumarate reductase flavoprotein C-term EYC29_RS06075 PF13085 2Fe-2S iron-sulfur cluster binding domain EYC29_RS06075 PF13183 4Fe-4S dicluster domain EYC29_RS06080 PF13091 PLD-like domain EYC29_RS06085 PF03350 Uncharacterized protein family, UPF0114 EYC29_RS06115 PF00464 Serine hydroxymethyltransferase EYC29_RS06120 PF01336 OB-fold nucleic acid binding domain EYC29_RS06120 PF00152 tRNA synthetases class II (D, K and N) EYC29_RS06130 PF00795 Carbon-nitrogen hydrolase EYC29_RS06135 PF00005 ABC transporter EYC29_RS06140 PF03102 NeuB family EYC29_RS06140 PF08666 SAF domain EYC29_RS06145 PF09285 Elongation factor P, C-terminal EYC29_RS06145 PF08207 Elongation factor P (EF-P) KOW-like domain EYC29_RS06145 PF01132 Elongation factor P (EF-P) OB domain EYC29_RS06150 PF01116 Fructose-bisphosphate aldolase class-II EYC29_RS06155 PF00639 PPIC-type PPIASE domain EYC29_RS06175 PF03462 PCRF domain EYC29_RS06175 PF00472 RF-1 domain EYC29_RS06185 PF01136 Peptidase family U32 EYC29_RS06200 PF00486 Transcriptional regulatory protein, C terminal EYC29_RS06200 PF00072 Response regulator receiver domain EYC29_RS06210 PF00490 Delta-aminolevulinic acid dehydratase EYC29_RS06215 PF01709 Transcriptional regulator EYC29_RS06220 PF08238 Sel1 repeat EYC29_RS06235 PF01202 Shikimate kinase EYC29_RS06250 PF00113 Enolase, C-terminal TIM barrel domain EYC29_RS06250 PF03952 Enolase, N-terminal domain EYC29_RS06255 PF00154 recA bacterial DNA recombination protein EYC29_RS06285 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP EYC29_RS06285 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EYC29_RS06300 PF00115 Cytochrome C and Quinol oxidase polypeptide I EYC29_RS06305 PF00939 Sodium:sulfate symporter transmembrane region EYC29_RS06310 PF00730 HhH-GPD superfamily base excision DNA repair protein EYC29_RS06310 PF00633 Helix-hairpin-helix motif EYC29_RS06310 PF14815 NUDIX domain EYC29_RS06315 PF02652 L-lactate permease EYC29_RS06320 PF02652 L-lactate permease EYC29_RS06325 PF02754 Cysteine-rich domain EYC29_RS06330 PF13183 4Fe-4S dicluster domain EYC29_RS06330 PF02589 LUD domain EYC29_RS06330 PF11870 Domain of unknown function (DUF3390) EYC29_RS06335 PF02589 LUD domain EYC29_RS06340 PF00578 AhpC/TSA family EYC29_RS06345 PF01474 Class-II DAHP synthetase family EYC29_RS06350 PF03222 Tryptophan/tyrosine permease family EYC29_RS06355 PF03315 Serine dehydratase beta chain EYC29_RS06355 PF03313 Serine dehydratase alpha chain EYC29_RS06375 PF00453 Ribosomal protein L20 EYC29_RS06380 PF01632 Ribosomal protein L35 EYC29_RS06385 PF05198 Translation initiation factor IF-3, N-terminal domain EYC29_RS06385 PF00707 Translation initiation factor IF-3, C-terminal domain EYC29_RS06390 PF03129 Anticodon binding domain EYC29_RS06390 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EYC29_RS06390 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EYC29_RS06395 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain EYC29_RS06395 PF02896 PEP-utilising enzyme, TIM barrel domain EYC29_RS06395 PF00391 PEP-utilising enzyme, mobile domain EYC29_RS06405 PF04055 Radical SAM superfamily EYC29_RS06410 PF01751 Toprim domain EYC29_RS06410 PF01396 Topoisomerase DNA binding C4 zinc finger EYC29_RS06410 PF01131 DNA topoisomerase EYC29_RS06415 PF07196 Flagellin hook IN motif EYC29_RS06415 PF00700 Bacterial flagellin C-terminal helical region EYC29_RS06415 PF00669 Bacterial flagellin N-terminal helical region EYC29_RS06440 PF01025 GrpE EYC29_RS06445 PF00012 Hsp70 protein EYC29_RS06450 PF00291 Pyridoxal-phosphate dependent enzyme EYC29_RS06455 PF01053 Cys/Met metabolism PLP-dependent enzyme EYC29_RS06460 PF02664 S-Ribosylhomocysteinase (LuxS) EYC29_RS06465 PF02872 5'-nucleotidase, C-terminal domain EYC29_RS06465 PF00149 Calcineurin-like phosphoesterase EYC29_RS06470 PF00672 HAMP domain EYC29_RS06470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EYC29_RS06470 PF17200 Single Cache domain 2 EYC29_RS06475 PF00535 Glycosyl transferase family 2 EYC29_RS06485 PF02677 Epoxyqueuosine reductase QueH EYC29_RS06490 PF00672 HAMP domain EYC29_RS06490 PF16591 Helical bimodular sensor domain EYC29_RS06490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EYC29_RS06495 PF00291 Pyridoxal-phosphate dependent enzyme EYC29_RS06505 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EYC29_RS06505 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EYC29_RS06520 PF01531 Glycosyl transferase family 11 EYC29_RS06525 PF01555 DNA methylase EYC29_RS06530 PF04556 DpnII restriction endonuclease EYC29_RS06540 PF00698 Acyl transferase domain EYC29_RS06545 PF01048 Phosphorylase superfamily EYC29_RS06550 PF00140 Sigma-70 factor, region 1.2 EYC29_RS06550 PF04545 Sigma-70, region 4 EYC29_RS06550 PF04539 Sigma-70 region 3 EYC29_RS06550 PF04542 Sigma-70 region 2 EYC29_RS06560 PF06039 Malate:quinone oxidoreductase (Mqo) EYC29_RS06565 PF17402 Family of unknown function (DUF5408) EYC29_RS06570 PF00572 Ribosomal protein L13 EYC29_RS06575 PF00380 Ribosomal protein S9/S16 EYC29_RS06580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EYC29_RS06580 PF00672 HAMP domain EYC29_RS06580 PF17200 Single Cache domain 2 EYC29_RS06605 PF03462 PCRF domain EYC29_RS06605 PF00472 RF-1 domain EYC29_RS06610 PF01649 Ribosomal protein S20 EYC29_RS06615 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EYC29_RS06615 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EYC29_RS06615 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EYC29_RS06615 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EYC29_RS06620 PF01252 Signal peptidase (SPase) II EYC29_RS06630 PF00699 Urease beta subunit EYC29_RS06630 PF00547 Urease, gamma subunit EYC29_RS06635 PF01979 Amidohydrolase family EYC29_RS06635 PF00449 Urease alpha-subunit, N-terminal domain EYC29_RS06640 PF02293 AmiS/UreI family transporter EYC29_RS06645 PF02814 UreE urease accessory protein, N-terminal domain EYC29_RS06645 PF05194 UreE urease accessory protein, C-terminal domain EYC29_RS06650 PF01730 UreF EYC29_RS06655 PF02492 CobW/HypB/UreG, nucleotide-binding domain EYC29_RS06660 PF01774 UreD urease accessory protein EYC29_RS06665 PF01580 FtsK/SpoIIIE family EYC29_RS06735 PF18327 Proline utilization A proline dehydrogenase N-terminal domain EYC29_RS06735 PF14850 DNA-binding domain of Proline dehydrogenase EYC29_RS06735 PF01619 Proline dehydrogenase EYC29_RS06735 PF00171 Aldehyde dehydrogenase family EYC29_RS06740 PF00474 Sodium:solute symporter family EYC29_RS06750 PF01555 DNA methylase EYC29_RS06760 PF03741 Integral membrane protein TerC family EYC29_RS06765 PF01544 CorA-like Mg2+ transporter protein EYC29_RS06770 PF00162 Phosphoglycerate kinase EYC29_RS06775 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EYC29_RS06775 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EYC29_RS06780 PF03167 Uracil DNA glycosylase superfamily EYC29_RS06785 PF01553 Acyltransferase EYC29_RS06795 PF13180 PDZ domain EYC29_RS06795 PF03572 Peptidase family S41 EYC29_RS06805 PF18755 Restriction Enzyme Adenine Methylase Associated EYC29_RS06805 PF01555 DNA methylase EYC29_RS06815 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain EYC29_RS06815 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain EYC29_RS06820 PF02445 Quinolinate synthetase A protein EYC29_RS06825 PF02666 Phosphatidylserine decarboxylase EYC29_RS06840 PF01040 UbiA prenyltransferase family EYC29_RS06850 PF00772 DnaB-like helicase N terminal domain EYC29_RS06850 PF03796 DnaB-like helicase C terminal domain EYC29_RS06855 PF03853 YjeF-related protein N-terminus EYC29_RS06855 PF01256 Carbohydrate kinase EYC29_RS06860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYC29_RS06865 PF00072 Response regulator receiver domain EYC29_RS06865 PF00486 Transcriptional regulatory protein, C terminal EYC29_RS06875 PF01555 DNA methylase EYC29_RS06880 PF18755 Restriction Enzyme Adenine Methylase Associated EYC29_RS06880 PF01555 DNA methylase EYC29_RS06885 PF01555 DNA methylase EYC29_RS06905 PF10431 C-terminal, D2-small domain, of ClpB protein EYC29_RS06905 PF07724 AAA domain (Cdc48 subfamily) EYC29_RS06910 PF00132 Bacterial transferase hexapeptide (six repeats) EYC29_RS06910 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 EYC29_RS06915 PF07977 FabA-like domain EYC29_RS06920 PF02623 FliW protein EYC29_RS06925 PF13525 Outer membrane lipoprotein EYC29_RS06930 PF05362 Lon protease (S16) C-terminal proteolytic domain EYC29_RS06930 PF02190 ATP-dependent protease La (LON) substrate-binding domain EYC29_RS06930 PF00004 ATPase family associated with various cellular activities (AAA) EYC29_RS06935 PF01842 ACT domain EYC29_RS06935 PF02153 Prephenate dehydrogenase EYC29_RS06950 PF08019 Phosphoethanolamine transferase EptA/EptB EYC29_RS06950 PF00884 Sulfatase EYC29_RS06955 PF01569 PAP2 superfamily EYC29_RS06960 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EYC29_RS06965 PF01584 CheW-like domain EYC29_RS06965 PF00072 Response regulator receiver domain EYC29_RS07005 PF01807 CHC2 zinc finger EYC29_RS07005 PF16730 DnaG-primase C-terminal, helicase-binding domain EYC29_RS07005 PF13662 Toprim domain EYC29_RS07005 PF08275 DNA primase catalytic core, N-terminal domain EYC29_RS07010 PF00166 Chaperonin 10 Kd subunit EYC29_RS07015 PF00118 TCP-1/cpn60 chaperonin family EYC29_RS07050 PF02569 Pantoate-beta-alanine ligase EYC29_RS07055 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EYC29_RS07065 PF00793 DAHP synthetase I family EYC29_RS07070 PF00885 6,7-dimethyl-8-ribityllumazine synthase EYC29_RS07075 PF01029 NusB family EYC29_RS07080 PF03981 Ubiquinol-cytochrome C chaperone EYC29_RS07080 PF13099 Domain of unknown function (DUF3944) EYC29_RS07095 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EYC29_RS07095 PF00460 Flagella basal body rod protein EYC29_RS07110 PF00814 Glycoprotease family EYC29_RS07115 PF04166 Pyridoxal phosphate biosynthetic protein PdxA EYC29_RS07120 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ EYC29_RS07125 PF00953 Glycosyl transferase family 4 EYC29_RS07130 PF01569 PAP2 superfamily EYC29_RS07140 PF00528 Binding-protein-dependent transport system inner membrane component EYC29_RS07145 PF09383 NIL domain EYC29_RS07145 PF00005 ABC transporter EYC29_RS07155 PF00677 Lumazine binding domain EYC29_RS07160 PF01026 TatD related DNase EYC29_RS07165 PF01476 LysM domain EYC29_RS07165 PF01464 Transglycosylase SLT domain EYC29_RS07170 PF05036 Sporulation related domain EYC29_RS07170 PF03330 Lytic transglycolase EYC29_RS07190 PF01926 50S ribosome-binding GTPase EYC29_RS07200 PF03717 Penicillin-binding Protein dimerisation domain EYC29_RS07200 PF00905 Penicillin binding protein transpeptidase domain EYC29_RS07205 PF03180 NLPA lipoprotein EYC29_RS07210 PF10417 C-terminal domain of 1-Cys peroxiredoxin EYC29_RS07210 PF00578 AhpC/TSA family EYC29_RS07220 PF01098 Cell cycle protein EYC29_RS07230 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EYC29_RS07230 PF00460 Flagella basal body rod protein EYC29_RS07235 PF02049 Flagellar hook-basal body complex protein FliE EYC29_RS07245 PF03717 Penicillin-binding Protein dimerisation domain EYC29_RS07245 PF00905 Penicillin binding protein transpeptidase domain EYC29_RS07265 PF00033 Cytochrome b/b6/petB EYC29_RS07265 PF00032 Cytochrome b(C-terminal)/b6/petD EYC29_RS07270 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal EYC29_RS07270 PF00355 Rieske [2Fe-2S] domain EYC29_RS07275 PF17757 UvrB interaction domain EYC29_RS07275 PF02559 CarD-like/TRCF domain EYC29_RS07275 PF00270 DEAD/DEAH box helicase EYC29_RS07275 PF00271 Helicase conserved C-terminal domain EYC29_RS07275 PF03461 TRCF domain EYC29_RS07285 PF04225 Opacity-associated protein A LysM-like domain EYC29_RS07285 PF01551 Peptidase family M23 EYC29_RS07290 PF01551 Peptidase family M23 EYC29_RS07295 PF08245 Mur ligase middle domain EYC29_RS07295 PF02875 Mur ligase family, glutamate ligase domain EYC29_RS07305 PF09334 tRNA synthetases class I (M) EYC29_RS07305 PF13603 Leucyl-tRNA synthetase, Domain 2 EYC29_RS07305 PF00133 tRNA synthetases class I (I, L, M and V) EYC29_RS07315 PF07549 SecD/SecF GG Motif EYC29_RS07315 PF02355 Protein export membrane protein EYC29_RS07320 PF02355 Protein export membrane protein EYC29_RS07325 PF02699 Preprotein translocase subunit EYC29_RS07330 PF06965 Na+/H+ antiporter 1 EYC29_RS07335 PF13361 UvrD-like helicase C-terminal domain EYC29_RS07335 PF00580 UvrD/REP helicase N-terminal domain EYC29_RS07335 PF12705 PD-(D/E)XK nuclease superfamily EYC29_RS07340 PF00318 Ribosomal protein S2 EYC29_RS07345 PF00889 Elongation factor TS EYC29_RS07370 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain EYC29_RS07375 PF00834 Ribulose-phosphate 3 epimerase family EYC29_RS07380 PF07733 Bacterial DNA polymerase III alpha NTPase domain EYC29_RS07380 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EYC29_RS07380 PF02811 PHP domain EYC29_RS07380 PF00929 Exonuclease EYC29_RS07380 PF14579 Helix-hairpin-helix motif EYC29_RS07395 PF05670 NFACT protein RNA binding domain EYC29_RS07400 PF02463 RecF/RecN/SMC N terminal domain EYC29_RS07405 PF01513 ATP-NAD kinase EYC29_RS07420 PF05222 Alanine dehydrogenase/PNT, N-terminal domain EYC29_RS07420 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EYC29_RS07425 PF00324 Amino acid permease EYC29_RS07430 PF00491 Arginase family EYC29_RS07455 PF00239 Resolvase, N terminal domain EYC29_RS07465 PF01420 Type I restriction modification DNA specificity domain EYC29_RS07475 PF02511 Thymidylate synthase complementing protein EYC29_RS07480 PF01380 SIS domain EYC29_RS07485 PF10398 Protein of unknown function (DUF2443)