locus-tag class description HK442_RS00005 PF00308 Bacterial dnaA protein HK442_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix HK442_RS00020 PF03372 Endonuclease/Exonuclease/phosphatase family HK442_RS00035 PF04851 Type III restriction enzyme, res subunit HK442_RS00035 PF00271 Helicase conserved C-terminal domain HK442_RS00040 PF18273 Type III R-M EcoP15I C-terminal domain HK442_RS00040 PF01555 DNA methylase HK442_RS00045 PF04851 Type III restriction enzyme, res subunit HK442_RS00045 PF08774 VRR-NUC domain HK442_RS00070 PF13184 NusA-like KH domain HK442_RS00070 PF08529 NusA N-terminal domain HK442_RS00075 PF03841 L-seryl-tRNA selenium transferase HK442_RS00095 PF02660 Glycerol-3-phosphate acyltransferase HK442_RS00100 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase HK442_RS00100 PF12801 4Fe-4S binding domain HK442_RS00100 PF13746 4Fe-4S dicluster domain HK442_RS00105 PF16653 Saccharopine dehydrogenase C-terminal domain HK442_RS00105 PF03435 Saccharopine dehydrogenase NADP binding domain HK442_RS00110 PF03616 Sodium/glutamate symporter HK442_RS00115 PF01872 RibD C-terminal domain HK442_RS00115 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HK442_RS00145 PF02086 D12 class N6 adenine-specific DNA methyltransferase HK442_RS00160 PF01195 Peptidyl-tRNA hydrolase HK442_RS00165 PF14693 Ribosomal protein TL5, C-terminal domain HK442_RS00165 PF01386 Ribosomal L25p family HK442_RS00170 PF00923 Transaldolase/Fructose-6-phosphate aldolase HK442_RS00175 PF08245 Mur ligase middle domain HK442_RS00175 PF02875 Mur ligase family, glutamate ligase domain HK442_RS00185 PF01106 NifU-like domain HK442_RS00190 PF01384 Phosphate transporter family HK442_RS00195 PF01595 Cyclin M transmembrane N-terminal domain HK442_RS00195 PF00571 CBS domain HK442_RS00195 PF03471 Transporter associated domain HK442_RS00205 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HK442_RS00220 PF01205 Uncharacterized protein family UPF0029 HK442_RS00220 PF09186 Domain of unknown function (DUF1949) HK442_RS00230 PF01209 ubiE/COQ5 methyltransferase family HK442_RS00235 PF02609 Exonuclease VII small subunit HK442_RS00245 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HK442_RS00245 PF02403 Seryl-tRNA synthetase N-terminal domain HK442_RS00255 PF00580 UvrD/REP helicase N-terminal domain HK442_RS00255 PF13361 UvrD-like helicase C-terminal domain HK442_RS00265 PF02441 Flavoprotein HK442_RS00270 PF01467 Cytidylyltransferase-like HK442_RS00275 PF02223 Thymidylate kinase HK442_RS00285 PF02384 N-6 DNA Methylase HK442_RS00295 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HK442_RS00295 PF00476 DNA polymerase family A HK442_RS00295 PF01367 5'-3' exonuclease, C-terminal SAM fold HK442_RS00305 PF01063 Amino-transferase class IV HK442_RS00315 PF02405 Permease MlaE HK442_RS00320 PF09383 NIL domain HK442_RS00320 PF00005 ABC transporter HK442_RS00340 PF00034 Cytochrome c HK442_RS00340 PF03150 Di-haem cytochrome c peroxidase HK442_RS00345 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HK442_RS00345 PF07733 Bacterial DNA polymerase III alpha NTPase domain HK442_RS00345 PF14579 Helix-hairpin-helix motif HK442_RS00345 PF02811 PHP domain HK442_RS00350 PF00849 RNA pseudouridylate synthase HK442_RS00350 PF01479 S4 domain HK442_RS00355 PF00085 Thioredoxin HK442_RS00365 PF02169 LPP20 lipoprotein HK442_RS00380 PF01420 Type I restriction modification DNA specificity domain HK442_RS00455 PF00437 Type II/IV secretion system protein HK442_RS00475 PF01396 Topoisomerase DNA binding C4 zinc finger HK442_RS00475 PF01751 Toprim domain HK442_RS00475 PF01131 DNA topoisomerase HK442_RS00500 PF13614 AAA domain HK442_RS00550 PF00589 Phage integrase family HK442_RS00550 PF02899 Phage integrase, N-terminal SAM-like domain HK442_RS00560 PF02384 N-6 DNA Methylase HK442_RS00560 PF12161 HsdM N-terminal domain HK442_RS00565 PF11867 Domain of unknown function (DUF3387) HK442_RS00565 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HK442_RS00565 PF18766 SWI2/SNF2 ATPase HK442_RS00575 PF07715 TonB-dependent Receptor Plug Domain HK442_RS00575 PF07660 Secretin and TonB N terminus short domain HK442_RS00575 PF00593 TonB dependent receptor HK442_RS00580 PF00491 Arginase family HK442_RS00585 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HK442_RS00585 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HK442_RS00600 PF01513 ATP-NAD kinase HK442_RS00605 PF02463 RecF/RecN/SMC N terminal domain HK442_RS00610 PF05670 NFACT protein RNA binding domain HK442_RS00620 PF08238 Sel1 repeat HK442_RS00625 PF02811 PHP domain HK442_RS00625 PF14480 DNA polymerase III polC-type N-terminus I HK442_RS00625 PF07733 Bacterial DNA polymerase III alpha NTPase domain HK442_RS00625 PF14579 Helix-hairpin-helix motif HK442_RS00625 PF11490 DNA polymerase III polC-type N-terminus II HK442_RS00625 PF00929 Exonuclease HK442_RS00625 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HK442_RS00630 PF00834 Ribulose-phosphate 3 epimerase family HK442_RS00635 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HK442_RS00660 PF00033 Cytochrome b/b6/petB HK442_RS00660 PF00032 Cytochrome b(C-terminal)/b6/petD HK442_RS00665 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal HK442_RS00665 PF00355 Rieske [2Fe-2S] domain HK442_RS00670 PF17757 UvrB interaction domain HK442_RS00670 PF03461 TRCF domain HK442_RS00670 PF00271 Helicase conserved C-terminal domain HK442_RS00670 PF00270 DEAD/DEAH box helicase HK442_RS00670 PF02559 CarD-like/TRCF domain HK442_RS00680 PF01551 Peptidase family M23 HK442_RS00680 PF04225 Opacity-associated protein A LysM-like domain HK442_RS00690 PF02875 Mur ligase family, glutamate ligase domain HK442_RS00690 PF08245 Mur ligase middle domain HK442_RS00700 PF09334 tRNA synthetases class I (M) HK442_RS00700 PF00133 tRNA synthetases class I (I, L, M and V) HK442_RS00700 PF13603 Leucyl-tRNA synthetase, Domain 2 HK442_RS00710 PF07549 SecD/SecF GG Motif HK442_RS00710 PF02355 Protein export membrane protein HK442_RS00715 PF02355 Protein export membrane protein HK442_RS00720 PF02699 Preprotein translocase subunit HK442_RS00725 PF06965 Na+/H+ antiporter 1 HK442_RS00730 PF13361 UvrD-like helicase C-terminal domain HK442_RS00730 PF00580 UvrD/REP helicase N-terminal domain HK442_RS00730 PF12705 PD-(D/E)XK nuclease superfamily HK442_RS00735 PF00318 Ribosomal protein S2 HK442_RS00740 PF00889 Elongation factor TS HK442_RS00745 PF00905 Penicillin binding protein transpeptidase domain HK442_RS00745 PF03717 Penicillin-binding Protein dimerisation domain HK442_RS00755 PF02049 Flagellar hook-basal body complex protein FliE HK442_RS00760 PF00460 Flagella basal body rod protein HK442_RS00760 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HK442_RS00770 PF01098 Cell cycle protein HK442_RS00785 PF00578 AhpC/TSA family HK442_RS00785 PF10417 C-terminal domain of 1-Cys peroxiredoxin HK442_RS00790 PF03180 NLPA lipoprotein HK442_RS00795 PF03717 Penicillin-binding Protein dimerisation domain HK442_RS00795 PF00905 Penicillin binding protein transpeptidase domain HK442_RS00805 PF01926 50S ribosome-binding GTPase HK442_RS00825 PF05036 Sporulation related domain HK442_RS00825 PF03330 Lytic transglycolase HK442_RS00830 PF01464 Transglycosylase SLT domain HK442_RS00830 PF01476 LysM domain HK442_RS00835 PF01026 TatD related DNase HK442_RS00840 PF00677 Lumazine binding domain HK442_RS00850 PF09383 NIL domain HK442_RS00850 PF00005 ABC transporter HK442_RS00855 PF00528 Binding-protein-dependent transport system inner membrane component HK442_RS00870 PF01569 PAP2 superfamily HK442_RS00875 PF00953 Glycosyl transferase family 4 HK442_RS00880 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HK442_RS00885 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HK442_RS00890 PF00814 Glycoprotease family HK442_RS00895 PF00460 Flagella basal body rod protein HK442_RS00895 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HK442_RS00910 PF13099 Domain of unknown function (DUF3944) HK442_RS00910 PF03981 Ubiquinol-cytochrome C chaperone HK442_RS00915 PF13099 Domain of unknown function (DUF3944) HK442_RS00915 PF03981 Ubiquinol-cytochrome C chaperone HK442_RS00920 PF01029 NusB family HK442_RS00925 PF00885 6,7-dimethyl-8-ribityllumazine synthase HK442_RS00930 PF00793 DAHP synthetase I family HK442_RS00935 PF00484 Carbonic anhydrase HK442_RS00940 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HK442_RS00945 PF02569 Pantoate-beta-alanine ligase HK442_RS00980 PF00118 TCP-1/cpn60 chaperonin family HK442_RS00985 PF00166 Chaperonin 10 Kd subunit HK442_RS00990 PF16730 DnaG-primase C-terminal, helicase-binding domain HK442_RS00990 PF13662 Toprim domain HK442_RS00990 PF08275 DNA primase catalytic core, N-terminal domain HK442_RS00990 PF01807 CHC2 zinc finger HK442_RS01030 PF01584 CheW-like domain HK442_RS01030 PF00072 Response regulator receiver domain HK442_RS01035 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HK442_RS01040 PF01569 PAP2 superfamily HK442_RS01045 PF08019 Phosphoethanolamine transferase EptA/EptB HK442_RS01045 PF00884 Sulfatase HK442_RS01060 PF01385 Probable transposase HK442_RS01060 PF07282 Putative transposase DNA-binding domain HK442_RS01060 PF12323 Helix-turn-helix domain HK442_RS01065 PF00285 Citrate synthase, C-terminal domain HK442_RS01070 PF00180 Isocitrate/isopropylmalate dehydrogenase HK442_RS01075 PF07509 Protein of unknown function (DUF1523) HK442_RS01090 PF00582 Universal stress protein family HK442_RS01095 PF02617 ATP-dependent Clp protease adaptor protein ClpS HK442_RS01100 PF02861 Clp amino terminal domain, pathogenicity island component HK442_RS01100 PF10431 C-terminal, D2-small domain, of ClpB protein HK442_RS01100 PF07724 AAA domain (Cdc48 subfamily) HK442_RS01100 PF00004 ATPase family associated with various cellular activities (AAA) HK442_RS01100 PF17871 AAA lid domain HK442_RS01105 PF02261 Aspartate decarboxylase HK442_RS01110 PF02575 YbaB/EbfC DNA-binding family HK442_RS01145 PF01050 Mannose-6-phosphate isomerase HK442_RS01145 PF00483 Nucleotidyl transferase HK442_RS01150 PF16363 GDP-mannose 4,6 dehydratase HK442_RS01155 PF01370 NAD dependent epimerase/dehydratase family HK442_RS01160 PF02769 AIR synthase related protein, C-terminal domain HK442_RS01160 PF00586 AIR synthase related protein, N-terminal domain HK442_RS01165 PF00708 Acylphosphatase HK442_RS01165 PF17788 HypF Kae1-like domain HK442_RS01165 PF01300 Telomere recombination HK442_RS01165 PF07503 HypF finger HK442_RS01170 PF04371 Porphyromonas-type peptidyl-arginine deiminase HK442_RS01175 PF01555 DNA methylase HK442_RS01185 PF00474 Sodium:solute symporter family HK442_RS01190 PF01619 Proline dehydrogenase HK442_RS01190 PF00171 Aldehyde dehydrogenase family HK442_RS01190 PF18327 Proline utilization A proline dehydrogenase N-terminal domain HK442_RS01190 PF14850 DNA-binding domain of Proline dehydrogenase HK442_RS01250 PF01774 UreD urease accessory protein HK442_RS01255 PF02492 CobW/HypB/UreG, nucleotide-binding domain HK442_RS01260 PF01730 UreF HK442_RS01265 PF02814 UreE urease accessory protein, N-terminal domain HK442_RS01265 PF05194 UreE urease accessory protein, C-terminal domain HK442_RS01270 PF02293 AmiS/UreI family transporter HK442_RS01275 PF01979 Amidohydrolase family HK442_RS01275 PF00449 Urease alpha-subunit, N-terminal domain HK442_RS01280 PF00547 Urease, gamma subunit HK442_RS01280 PF00699 Urease beta subunit HK442_RS01290 PF01252 Signal peptidase (SPase) II HK442_RS01295 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HK442_RS01295 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HK442_RS01295 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HK442_RS01295 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HK442_RS01300 PF01649 Ribosomal protein S20 HK442_RS01305 PF00472 RF-1 domain HK442_RS01305 PF03462 PCRF domain HK442_RS01325 PF17200 Single Cache domain 2 HK442_RS01325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HK442_RS01325 PF00672 HAMP domain HK442_RS01330 PF00380 Ribosomal protein S9/S16 HK442_RS01335 PF00572 Ribosomal protein L13 HK442_RS01340 PF17402 Family of unknown function (DUF5408) HK442_RS01345 PF06039 Malate:quinone oxidoreductase (Mqo) HK442_RS01355 PF04545 Sigma-70, region 4 HK442_RS01355 PF00140 Sigma-70 factor, region 1.2 HK442_RS01355 PF04539 Sigma-70 region 3 HK442_RS01355 PF04542 Sigma-70 region 2 HK442_RS01360 PF01048 Phosphorylase superfamily HK442_RS01365 PF00698 Acyl transferase domain HK442_RS01380 PF01636 Phosphotransferase enzyme family HK442_RS01385 PF01531 Glycosyl transferase family 11 HK442_RS01400 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HK442_RS01400 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HK442_RS01410 PF00291 Pyridoxal-phosphate dependent enzyme HK442_RS01415 PF00672 HAMP domain HK442_RS01415 PF16591 Helical bimodular sensor domain HK442_RS01415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HK442_RS01420 PF02677 Epoxyqueuosine reductase QueH HK442_RS01430 PF00535 Glycosyl transferase family 2 HK442_RS01435 PF00672 HAMP domain HK442_RS01435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HK442_RS01435 PF17200 Single Cache domain 2 HK442_RS01440 PF02872 5'-nucleotidase, C-terminal domain HK442_RS01440 PF00149 Calcineurin-like phosphoesterase HK442_RS01445 PF02664 S-Ribosylhomocysteinase (LuxS) HK442_RS01450 PF01053 Cys/Met metabolism PLP-dependent enzyme HK442_RS01455 PF00291 Pyridoxal-phosphate dependent enzyme HK442_RS01465 PF00012 Hsp70 protein HK442_RS01470 PF01025 GrpE HK442_RS01495 PF00700 Bacterial flagellin C-terminal helical region HK442_RS01495 PF07196 Flagellin hook IN motif HK442_RS01495 PF00669 Bacterial flagellin N-terminal helical region HK442_RS01500 PF01131 DNA topoisomerase HK442_RS01500 PF01751 Toprim domain HK442_RS01500 PF01396 Topoisomerase DNA binding C4 zinc finger HK442_RS01505 PF04055 Radical SAM superfamily HK442_RS01515 PF02896 PEP-utilising enzyme, TIM barrel domain HK442_RS01515 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HK442_RS01515 PF00391 PEP-utilising enzyme, mobile domain HK442_RS01520 PF03129 Anticodon binding domain HK442_RS01520 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HK442_RS01520 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HK442_RS01525 PF00707 Translation initiation factor IF-3, C-terminal domain HK442_RS01525 PF05198 Translation initiation factor IF-3, N-terminal domain HK442_RS01530 PF01632 Ribosomal protein L35 HK442_RS01535 PF00453 Ribosomal protein L20 HK442_RS01555 PF03313 Serine dehydratase alpha chain HK442_RS01555 PF03315 Serine dehydratase beta chain HK442_RS01560 PF03222 Tryptophan/tyrosine permease family HK442_RS01565 PF01474 Class-II DAHP synthetase family HK442_RS01570 PF00578 AhpC/TSA family HK442_RS01575 PF02589 LUD domain HK442_RS01580 PF13183 4Fe-4S dicluster domain HK442_RS01580 PF02589 LUD domain HK442_RS01580 PF11870 Domain of unknown function (DUF3390) HK442_RS01585 PF02754 Cysteine-rich domain HK442_RS01590 PF02652 L-lactate permease HK442_RS01595 PF02652 L-lactate permease HK442_RS01600 PF00633 Helix-hairpin-helix motif HK442_RS01600 PF00730 HhH-GPD superfamily base excision DNA repair protein HK442_RS01600 PF14815 NUDIX domain HK442_RS01605 PF00939 Sodium:sulfate symporter transmembrane region HK442_RS01610 PF00115 Cytochrome C and Quinol oxidase polypeptide I HK442_RS01625 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HK442_RS01625 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP HK442_RS01655 PF00154 recA bacterial DNA recombination protein HK442_RS01660 PF03952 Enolase, N-terminal domain HK442_RS01660 PF00113 Enolase, C-terminal TIM barrel domain HK442_RS01675 PF01202 Shikimate kinase HK442_RS01690 PF08238 Sel1 repeat HK442_RS01695 PF01709 Transcriptional regulator HK442_RS01700 PF00490 Delta-aminolevulinic acid dehydratase HK442_RS01710 PF00486 Transcriptional regulatory protein, C terminal HK442_RS01710 PF00072 Response regulator receiver domain HK442_RS01735 PF03462 PCRF domain HK442_RS01735 PF00472 RF-1 domain HK442_RS01740 PF03454 MoeA C-terminal region (domain IV) HK442_RS01740 PF00994 Probable molybdopterin binding domain HK442_RS01740 PF03453 MoeA N-terminal region (domain I and II) HK442_RS01755 PF00639 PPIC-type PPIASE domain HK442_RS01760 PF01116 Fructose-bisphosphate aldolase class-II HK442_RS01765 PF01132 Elongation factor P (EF-P) OB domain HK442_RS01765 PF08207 Elongation factor P (EF-P) KOW-like domain HK442_RS01765 PF09285 Elongation factor P, C-terminal HK442_RS01775 PF01883 Iron-sulfur cluster assembly protein HK442_RS01775 PF10609 NUBPL iron-transfer P-loop NTPase HK442_RS01795 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HK442_RS01795 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HK442_RS01800 PF02504 Fatty acid synthesis protein HK442_RS01805 PF01783 Ribosomal L32p protein family HK442_RS01815 PF00334 Nucleoside diphosphate kinase HK442_RS01820 PF00438 S-adenosylmethionine synthetase, N-terminal domain HK442_RS01820 PF02772 S-adenosylmethionine synthetase, central domain HK442_RS01820 PF02773 S-adenosylmethionine synthetase, C-terminal domain HK442_RS01825 PF00132 Bacterial transferase hexapeptide (six repeats) HK442_RS01825 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HK442_RS01835 PF00121 Triosephosphate isomerase HK442_RS01840 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HK442_RS01845 PF00890 FAD binding domain HK442_RS01845 PF02910 Fumarate reductase flavoprotein C-term HK442_RS01850 PF13085 2Fe-2S iron-sulfur cluster binding domain HK442_RS01850 PF13183 4Fe-4S dicluster domain HK442_RS01855 PF13091 PLD-like domain HK442_RS01860 PF03350 Uncharacterized protein family, UPF0114 HK442_RS01875 PF00464 Serine hydroxymethyltransferase HK442_RS01880 PF00152 tRNA synthetases class II (D, K and N) HK442_RS01880 PF01336 OB-fold nucleic acid binding domain HK442_RS01890 PF00795 Carbon-nitrogen hydrolase HK442_RS01895 PF00005 ABC transporter HK442_RS01900 PF03102 NeuB family HK442_RS01900 PF08666 SAF domain HK442_RS01915 PF00183 Hsp90 protein HK442_RS01920 PF08238 Sel1 repeat HK442_RS01925 PF07687 Peptidase dimerisation domain HK442_RS01925 PF01546 Peptidase family M20/M25/M40 HK442_RS01930 PF13932 GidA associated domain HK442_RS01930 PF01134 Glucose inhibited division protein A HK442_RS01935 PF00939 Sodium:sulfate symporter transmembrane region HK442_RS01945 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HK442_RS01945 PF13288 DXP reductoisomerase C-terminal domain HK442_RS01945 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HK442_RS01950 PF01161 Phosphatidylethanolamine-binding protein HK442_RS01960 PF00266 Aminotransferase class-V HK442_RS01965 PF04324 BFD-like [2Fe-2S] binding domain HK442_RS01965 PF01106 NifU-like domain HK442_RS01965 PF01592 NifU-like N terminal domain HK442_RS01975 PF18073 Rubredoxin metal binding domain HK442_RS01980 PF01625 Peptide methionine sulfoxide reductase HK442_RS01980 PF01641 SelR domain HK442_RS01985 PF01925 Sulfite exporter TauE/SafE HK442_RS01995 PF01740 STAS domain HK442_RS01995 PF00916 Sulfate permease family HK442_RS02010 PF02348 Cytidylyltransferase HK442_RS02025 PF03738 Glutathionylspermidine synthase preATP-grasp HK442_RS02045 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HK442_RS02045 PF03900 Porphobilinogen deaminase, C-terminal domain HK442_RS02050 PF04073 Aminoacyl-tRNA editing domain HK442_RS02050 PF03129 Anticodon binding domain HK442_RS02050 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HK442_RS02055 PF01488 Shikimate / quinate 5-dehydrogenase HK442_RS02055 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HK442_RS02055 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HK442_RS02060 PF00348 Polyprenyl synthetase HK442_RS02075 PF00210 Ferritin-like domain HK442_RS02080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HK442_RS02080 PF00512 His Kinase A (phospho-acceptor) domain HK442_RS02090 PF02119 Flagellar P-ring protein HK442_RS02095 PF00271 Helicase conserved C-terminal domain HK442_RS02095 PF00270 DEAD/DEAH box helicase HK442_RS02110 PF00005 ABC transporter HK442_RS02110 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HK442_RS02135 PF00709 Adenylosuccinate synthetase HK442_RS02150 PF02163 Peptidase family M50 HK442_RS02155 PF13742 OB-fold nucleic acid binding domain HK442_RS02155 PF02601 Exonuclease VII, large subunit HK442_RS02160 PF18273 Type III R-M EcoP15I C-terminal domain HK442_RS02160 PF01555 DNA methylase HK442_RS02175 PF18643 BsaWI restriction endonuclease type 2 HK442_RS02185 PF07282 Putative transposase DNA-binding domain HK442_RS02185 PF01385 Probable transposase HK442_RS02185 PF12323 Helix-turn-helix domain HK442_RS02200 PF17871 AAA lid domain HK442_RS02200 PF07724 AAA domain (Cdc48 subfamily) HK442_RS02200 PF02861 Clp amino terminal domain, pathogenicity island component HK442_RS02200 PF00004 ATPase family associated with various cellular activities (AAA) HK442_RS02200 PF10431 C-terminal, D2-small domain, of ClpB protein HK442_RS02205 PF02683 Cytochrome C biogenesis protein transmembrane region HK442_RS02210 PF01979 Amidohydrolase family HK442_RS02215 PF01979 Amidohydrolase family HK442_RS02225 PF00919 Uncharacterized protein family UPF0004 HK442_RS02225 PF04055 Radical SAM superfamily HK442_RS02250 PF03692 Putative zinc- or iron-chelating domain HK442_RS02260 PF00218 Indole-3-glycerol phosphate synthase HK442_RS02270 PF02541 Ppx/GppA phosphatase family HK442_RS02275 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HK442_RS02285 PF01702 Queuine tRNA-ribosyltransferase HK442_RS02295 PF01761 3-dehydroquinate synthase HK442_RS02305 PF00919 Uncharacterized protein family UPF0004 HK442_RS02305 PF04055 Radical SAM superfamily HK442_RS02310 PF01434 Peptidase family M41 HK442_RS02310 PF17862 AAA+ lid domain HK442_RS02310 PF00004 ATPase family associated with various cellular activities (AAA) HK442_RS02325 PF03797 Autotransporter beta-domain HK442_RS02325 PF02691 Vacuolating cyotoxin HK442_RS02330 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HK442_RS02330 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HK442_RS02345 PF00425 chorismate binding enzyme HK442_RS02345 PF04715 Anthranilate synthase component I, N terminal region HK442_RS02360 PF12323 Helix-turn-helix domain HK442_RS02360 PF01385 Probable transposase HK442_RS02360 PF07282 Putative transposase DNA-binding domain HK442_RS02375 PF00829 Ribosomal prokaryotic L21 protein HK442_RS02380 PF01016 Ribosomal L27 protein HK442_RS02385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HK442_RS02390 PF00528 Binding-protein-dependent transport system inner membrane component HK442_RS02395 PF00528 Binding-protein-dependent transport system inner membrane component HK442_RS02395 PF12911 N-terminal TM domain of oligopeptide transport permease C HK442_RS02400 PF00005 ABC transporter HK442_RS02400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HK442_RS02405 PF00005 ABC transporter HK442_RS02405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HK442_RS02410 PF01926 50S ribosome-binding GTPase HK442_RS02410 PF01018 GTP1/OBG HK442_RS02425 PF00202 Aminotransferase class-III HK442_RS02440 PF00795 Carbon-nitrogen hydrolase HK442_RS02445 PF01522 Polysaccharide deacetylase HK442_RS02455 PF07683 Cobalamin synthesis protein cobW C-terminal domain HK442_RS02455 PF02492 CobW/HypB/UreG, nucleotide-binding domain HK442_RS02465 PF01243 Pyridoxamine 5'-phosphate oxidase HK442_RS02465 PF10615 Protein of unknown function (DUF2470) HK442_RS02470 PF00750 tRNA synthetases class I (R) HK442_RS02470 PF03485 Arginyl tRNA synthetase N terminal domain HK442_RS02470 PF05746 DALR anticodon binding domain HK442_RS02475 PF02416 mttA/Hcf106 family HK442_RS02480 PF00625 Guanylate kinase HK442_RS02500 PF02107 Flagellar L-ring protein HK442_RS02505 PF02348 Cytidylyltransferase HK442_RS02510 PF02348 Cytidylyltransferase HK442_RS02520 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HK442_RS02525 PF02540 NAD synthase HK442_RS02535 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HK442_RS02535 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HK442_RS02540 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HK442_RS02545 PF03776 Septum formation topological specificity factor MinE HK442_RS02550 PF17782 DprA winged helix domain HK442_RS02550 PF02481 DNA recombination-mediator protein A HK442_RS02555 PF03652 Holliday junction resolvase HK442_RS02560 PF08238 Sel1 repeat HK442_RS02575 PF00849 RNA pseudouridylate synthase HK442_RS02580 PF01368 DHH family HK442_RS02580 PF02272 DHHA1 domain HK442_RS02580 PF17768 RecJ OB domain HK442_RS02580 PF10141 Single-strand DNA-specific exonuclease, C terminal domain HK442_RS02585 PF00117 Glutamine amidotransferase class-I HK442_RS02585 PF06418 CTP synthase N-terminus HK442_RS02595 PF01514 Secretory protein of YscJ/FliF family HK442_RS02595 PF08345 Flagellar M-ring protein C-terminal HK442_RS02600 PF01706 FliG C-terminal domain HK442_RS02600 PF14842 FliG N-terminal domain HK442_RS02600 PF14841 FliG middle domain HK442_RS02610 PF02779 Transketolase, pyrimidine binding domain HK442_RS02610 PF02780 Transketolase, C-terminal domain HK442_RS02610 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HK442_RS02615 PF06421 GTP-binding protein LepA C-terminus HK442_RS02615 PF03144 Elongation factor Tu domain 2 HK442_RS02615 PF00009 Elongation factor Tu GTP binding domain HK442_RS02615 PF00679 Elongation factor G C-terminus HK442_RS02635 PF08402 TOBE domain HK442_RS02635 PF00005 ABC transporter HK442_RS02645 PF00460 Flagella basal body rod protein HK442_RS02645 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HK442_RS02650 PF00083 Sugar (and other) transporter HK442_RS02655 PF07282 Putative transposase DNA-binding domain HK442_RS02655 PF12323 Helix-turn-helix domain HK442_RS02655 PF01385 Probable transposase HK442_RS02665 PF01580 FtsK/SpoIIIE family HK442_RS02665 PF09397 Ftsk gamma domain HK442_RS02665 PF17854 FtsK alpha domain HK442_RS02675 PF02780 Transketolase, C-terminal domain HK442_RS02675 PF00456 Transketolase, thiamine diphosphate binding domain HK442_RS02675 PF02779 Transketolase, pyrimidine binding domain HK442_RS02680 PF06574 FAD synthetase HK442_RS02685 PF01479 S4 domain HK442_RS02685 PF00163 Ribosomal protein S4/S9 N-terminal domain HK442_RS02695 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HK442_RS02695 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HK442_RS02705 PF00664 ABC transporter transmembrane region HK442_RS02705 PF00005 ABC transporter HK442_RS02720 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system HK442_RS02730 PF03824 High-affinity nickel-transport protein HK442_RS02750 PF00403 Heavy-metal-associated domain HK442_RS02755 PF00403 Heavy-metal-associated domain HK442_RS02760 PF01066 CDP-alcohol phosphatidyltransferase HK442_RS02770 PF01434 Peptidase family M41 HK442_RS02770 PF17862 AAA+ lid domain HK442_RS02770 PF00004 ATPase family associated with various cellular activities (AAA) HK442_RS02780 PF00072 Response regulator receiver domain HK442_RS02805 PF02527 rRNA small subunit methyltransferase G HK442_RS02810 PF02547 Queuosine biosynthesis protein HK442_RS02815 PF00902 Sec-independent protein translocase protein (TatC) HK442_RS02825 PF17864 RuvB AAA lid domain HK442_RS02825 PF05491 RuvB C-terminal winged helix domain HK442_RS02825 PF05496 Holliday junction DNA helicase RuvB P-loop domain HK442_RS02830 PF02548 Ketopantoate hydroxymethyltransferase HK442_RS02855 PF03775 Septum formation inhibitor MinC, C-terminal domain HK442_RS02860 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HK442_RS02870 PF00288 GHMP kinases N terminal domain HK442_RS02880 PF11987 Translation-initiation factor 2 HK442_RS02880 PF00009 Elongation factor Tu GTP binding domain HK442_RS02880 PF04760 Translation initiation factor IF-2, N-terminal region HK442_RS02885 PF02033 Ribosome-binding factor A HK442_RS02890 PF02576 RimP N-terminal domain HK442_RS02890 PF17384 RimP C-terminal SH3 domain HK442_RS02895 PF00501 AMP-binding enzyme HK442_RS02895 PF13193 AMP-binding enzyme C-terminal domain HK442_RS02895 PF16177 Acetyl-coenzyme A synthetase N-terminus HK442_RS02900 PF00149 Calcineurin-like phosphoesterase HK442_RS02905 PF00072 Response regulator receiver domain HK442_RS02905 PF00486 Transcriptional regulatory protein, C terminal HK442_RS02915 PF00771 FHIPEP family HK442_RS02920 PF00312 Ribosomal protein S15 HK442_RS02930 PF01220 Dehydroquinase class II HK442_RS02935 PF01321 Creatinase/Prolidase N-terminal domain HK442_RS02935 PF00557 Metallopeptidase family M24 HK442_RS02940 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HK442_RS02945 PF00448 SRP54-type protein, GTPase domain HK442_RS02950 PF10609 NUBPL iron-transfer P-loop NTPase HK442_RS02960 PF04545 Sigma-70, region 4 HK442_RS02960 PF04539 Sigma-70 region 3 HK442_RS02960 PF04542 Sigma-70 region 2 HK442_RS02965 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HK442_RS02965 PF02154 Flagellar motor switch protein FliM HK442_RS02970 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HK442_RS02970 PF04509 CheC-like family HK442_RS02985 PF01475 Ferric uptake regulator family HK442_RS02990 PF01661 Macro domain HK442_RS02990 PF05496 Holliday junction DNA helicase RuvB P-loop domain HK442_RS02990 PF16193 AAA C-terminal domain HK442_RS02990 PF12002 MgsA AAA+ ATPase C terminal HK442_RS02995 PF13411 MerR HTH family regulatory protein HK442_RS03000 PF01556 DnaJ C terminal domain HK442_RS03000 PF00226 DnaJ domain HK442_RS03010 PF01367 5'-3' exonuclease, C-terminal SAM fold HK442_RS03010 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HK442_RS03010 PF00476 DNA polymerase family A HK442_RS03010 PF01612 3'-5' exonuclease HK442_RS03015 PF00072 Response regulator receiver domain HK442_RS03015 PF00486 Transcriptional regulatory protein, C terminal HK442_RS03020 PF02542 YgbB family HK442_RS03020 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HK442_RS03025 PF17820 PDZ domain HK442_RS03025 PF13180 PDZ domain HK442_RS03030 PF00324 Amino acid permease HK442_RS03035 PF01066 CDP-alcohol phosphatidyltransferase HK442_RS03050 PF00701 Dihydrodipicolinate synthetase family HK442_RS03060 PF01180 Dihydroorotate dehydrogenase HK442_RS03065 PF13090 Polyphosphate kinase C-terminal domain 2 HK442_RS03065 PF02503 Polyphosphate kinase middle domain HK442_RS03065 PF17941 Polyphosphate kinase C-terminal domain 1 HK442_RS03065 PF13089 Polyphosphate kinase N-terminal domain HK442_RS03080 PF02384 N-6 DNA Methylase HK442_RS03080 PF12161 HsdM N-terminal domain HK442_RS03120 PF02254 TrkA-N domain HK442_RS03120 PF00999 Sodium/hydrogen exchanger family HK442_RS03135 PF00528 Binding-protein-dependent transport system inner membrane component HK442_RS03140 PF00005 ABC transporter HK442_RS03140 PF08402 TOBE domain HK442_RS03145 PF00749 tRNA synthetases class I (E and Q), catalytic domain HK442_RS03155 PF02384 N-6 DNA Methylase HK442_RS03210 PF02075 Crossover junction endodeoxyribonuclease RuvC HK442_RS03215 PF07715 TonB-dependent Receptor Plug Domain HK442_RS03215 PF00593 TonB dependent receptor HK442_RS03235 PF03831 PhnA domain HK442_RS03235 PF08274 PhnA Zinc-Ribbon HK442_RS03245 PF07559 Flagellar basal body protein FlaE HK442_RS03245 PF07196 Flagellin hook IN motif HK442_RS03245 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HK442_RS03245 PF00460 Flagella basal body rod protein HK442_RS03250 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA HK442_RS03260 PF02684 Lipid-A-disaccharide synthetase HK442_RS03265 PF01272 Transcription elongation factor, GreA/GreB, C-term HK442_RS03265 PF03449 Transcription elongation factor, N-terminal HK442_RS03270 PF00692 dUTPase HK442_RS03280 PF15437 Plasminogen-binding protein pgbA C-terminal HK442_RS03285 PF03309 Type III pantothenate kinase HK442_RS03300 PF01370 NAD dependent epimerase/dehydratase family HK442_RS03305 PF00294 pfkB family carbohydrate kinase HK442_RS03305 PF01467 Cytidylyltransferase-like HK442_RS03310 PF13580 SIS domain HK442_RS03320 PF03062 MBOAT, membrane-bound O-acyltransferase family HK442_RS03325 PF00478 IMP dehydrogenase / GMP reductase domain HK442_RS03330 PF12848 ABC transporter HK442_RS03330 PF00005 ABC transporter HK442_RS03340 PF01569 PAP2 superfamily HK442_RS03345 PF09556 HaeIII restriction endonuclease HK442_RS03350 PF00145 C-5 cytosine-specific DNA methylase HK442_RS03365 PF12323 Helix-turn-helix domain HK442_RS03365 PF01385 Probable transposase HK442_RS03365 PF07282 Putative transposase DNA-binding domain HK442_RS03375 PF01420 Type I restriction modification DNA specificity domain HK442_RS03380 PF18766 SWI2/SNF2 ATPase HK442_RS03380 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HK442_RS03380 PF12008 Type I restriction and modification enzyme - subunit R C terminal HK442_RS03385 PF02110 Hydroxyethylthiazole kinase family HK442_RS03390 PF08543 Phosphomethylpyrimidine kinase HK442_RS03395 PF02581 Thiamine monophosphate synthase HK442_RS03405 PF04127 DNA / pantothenate metabolism flavoprotein HK442_RS03405 PF02441 Flavoprotein HK442_RS03410 PF02719 Polysaccharide biosynthesis protein HK442_RS03435 PF00216 Bacterial DNA-binding protein HK442_RS03440 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HK442_RS03440 PF01926 50S ribosome-binding GTPase HK442_RS03450 PF17284 Spermidine synthase tetramerisation domain HK442_RS03455 PF01121 Dephospho-CoA kinase HK442_RS03460 PF01425 Amidase HK442_RS03465 PF00478 IMP dehydrogenase / GMP reductase domain HK442_RS03465 PF00571 CBS domain HK442_RS03470 PF00119 ATP synthase A chain HK442_RS03475 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HK442_RS03485 PF07992 Pyridine nucleotide-disulphide oxidoreductase HK442_RS03490 PF00085 Thioredoxin HK442_RS03495 PF02021 Uncharacterised protein family UPF0102 HK442_RS03500 PF01842 ACT domain HK442_RS03500 PF00742 Homoserine dehydrogenase HK442_RS03500 PF03447 Homoserine dehydrogenase, NAD binding domain HK442_RS03505 PF08459 UvrC Helix-hairpin-helix N-terminal HK442_RS03505 PF02151 UvrB/uvrC motif HK442_RS03505 PF01541 GIY-YIG catalytic domain HK442_RS03520 PF00571 CBS domain HK442_RS03520 PF00005 ABC transporter HK442_RS03525 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HK442_RS03535 PF00691 OmpA family HK442_RS03535 PF13677 Membrane MotB of proton-channel complex MotA/MotB HK442_RS03540 PF01618 MotA/TolQ/ExbB proton channel family HK442_RS03545 PF00899 ThiF family HK442_RS03550 PF00753 Metallo-beta-lactamase superfamily HK442_RS03570 PF03748 Flagellar basal body-associated protein FliL HK442_RS03575 PF01648 4'-phosphopantetheinyl transferase superfamily HK442_RS03595 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HK442_RS03595 PF00925 GTP cyclohydrolase II HK442_RS03605 PF00925 GTP cyclohydrolase II HK442_RS03615 PF02391 MoaE protein HK442_RS03620 PF00994 Probable molybdopterin binding domain HK442_RS03625 PF01967 MoaC family HK442_RS03630 PF05211 Neuraminyllactose-binding hemagglutinin precursor (NLBH) HK442_RS03640 PF05697 Bacterial trigger factor protein (TF) HK442_RS03640 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HK442_RS03640 PF05698 Bacterial trigger factor protein (TF) C-terminus HK442_RS03645 PF00574 Clp protease HK442_RS03650 PF01327 Polypeptide deformylase HK442_RS03655 PF13335 Magnesium chelatase, subunit ChlI C-terminal HK442_RS03655 PF01078 Magnesium chelatase, subunit ChlI HK442_RS03660 PF00403 Heavy-metal-associated domain HK442_RS03665 PF01420 Type I restriction modification DNA specificity domain HK442_RS03680 PF07516 SecA Wing and Scaffold domain HK442_RS03680 PF01043 SecA preprotein cross-linking domain HK442_RS03680 PF07517 SecA DEAD-like domain HK442_RS03680 PF02810 SEC-C motif HK442_RS03685 PF03548 Outer membrane lipoprotein carrier protein LolA HK442_RS03715 PF11791 Aconitate B N-terminal domain HK442_RS03715 PF06434 Aconitate hydratase 2 N-terminus HK442_RS03715 PF00330 Aconitase family (aconitate hydratase) HK442_RS03725 PF00696 Amino acid kinase family HK442_RS03730 PF01192 RNA polymerase Rpb6 HK442_RS03735 PF02824 TGS domain HK442_RS03735 PF04607 Region found in RelA / SpoT proteins HK442_RS03735 PF13291 ACT domain HK442_RS03740 PF01479 S4 domain HK442_RS03740 PF00579 tRNA synthetases class I (W and Y) HK442_RS03750 PF01520 N-acetylmuramoyl-L-alanine amidase HK442_RS03760 PF01312 FlhB HrpN YscU SpaS Family HK442_RS03765 PF12804 MobA-like NTP transferase domain HK442_RS03770 PF04055 Radical SAM superfamily HK442_RS03770 PF06463 Molybdenum Cofactor Synthesis C HK442_RS03795 PF00448 SRP54-type protein, GTPase domain HK442_RS03810 PF12072 Domain of unknown function (DUF3552) HK442_RS03810 PF00013 KH domain HK442_RS03810 PF01966 HD domain HK442_RS03815 PF01554 MatE HK442_RS03820 PF13726 Na+-H+ antiporter family HK442_RS03820 PF03553 Na+/H+ antiporter family HK442_RS03825 PF00795 Carbon-nitrogen hydrolase HK442_RS03835 PF00581 Rhodanese-like domain HK442_RS03835 PF00899 ThiF family HK442_RS03845 PF02561 Flagellar protein FliS HK442_RS03850 PF02465 Flagellar hook-associated protein 2 N-terminus HK442_RS03850 PF07195 Flagellar hook-associated protein 2 C-terminus HK442_RS03870 PF00005 ABC transporter HK442_RS03875 PF02390 Putative methyltransferase HK442_RS03885 PF01479 S4 domain HK442_RS03885 PF00849 RNA pseudouridylate synthase HK442_RS03890 PF03193 RsgA GTPase HK442_RS03900 PF01098 Cell cycle protein HK442_RS03910 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HK442_RS03910 PF14572 Phosphoribosyl synthetase-associated domain HK442_RS03915 PF01230 HIT domain HK442_RS03920 PF01225 Mur ligase family, catalytic domain HK442_RS03920 PF02875 Mur ligase family, glutamate ligase domain HK442_RS03920 PF08245 Mur ligase middle domain HK442_RS03930 PF07478 D-ala D-ala ligase C-terminus HK442_RS03930 PF01820 D-ala D-ala ligase N-terminus HK442_RS03935 PF04608 Phosphatidylglycerophosphatase A HK442_RS03940 PF00266 Aminotransferase class-V HK442_RS03945 PF00156 Phosphoribosyl transferase domain HK442_RS03950 PF04055 Radical SAM superfamily HK442_RS03950 PF00919 Uncharacterized protein family UPF0004 HK442_RS03985 PF01171 PP-loop family HK442_RS03990 PF01207 Dihydrouridine synthase (Dus) HK442_RS04005 PF03605 Anaerobic c4-dicarboxylate membrane transporter HK442_RS04010 PF00710 Asparaginase, N-terminal HK442_RS04010 PF17763 Glutaminase/Asparaginase C-terminal domain HK442_RS04030 PF01810 LysE type translocator HK442_RS04035 PF12170 DNA polymerase III tau subunit V interacting with alpha HK442_RS04035 PF12169 DNA polymerase III subunits gamma and tau domain III HK442_RS04045 PF00005 ABC transporter HK442_RS04045 PF12399 Branched-chain amino acid ATP-binding cassette transporter HK442_RS04050 PF00309 Sigma-54 factor, Activator interacting domain (AID) HK442_RS04050 PF04552 Sigma-54, DNA binding domain HK442_RS04050 PF04963 Sigma-54 factor, core binding domain HK442_RS04075 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase HK442_RS04085 PF01795 MraW methylase family HK442_RS04095 PF17760 UvrA interaction domain HK442_RS04095 PF17755 UvrA DNA-binding domain HK442_RS04105 PF00072 Response regulator receiver domain HK442_RS04105 PF00158 Sigma-54 interaction domain HK442_RS04115 PF03989 DNA gyrase C-terminal domain, beta-propeller HK442_RS04115 PF00521 DNA gyrase/topoisomerase IV, subunit A HK442_RS04120 PF01219 Prokaryotic diacylglycerol kinase HK442_RS04135 PF08882 Acetone carboxylase gamma subunit HK442_RS04140 PF02538 Hydantoinase B/oxoprolinase HK442_RS04145 PF05378 Hydantoinase/oxoprolinase N-terminal region HK442_RS04145 PF01968 Hydantoinase/oxoprolinase HK442_RS04155 PF02667 Short chain fatty acid transporter HK442_RS04160 PF01144 Coenzyme A transferase HK442_RS04165 PF01144 Coenzyme A transferase HK442_RS04170 PF02803 Thiolase, C-terminal domain HK442_RS04170 PF00108 Thiolase, N-terminal domain HK442_RS04180 PF07664 Ferrous iron transport protein B C terminus HK442_RS04180 PF02421 Ferrous iron transport protein B HK442_RS04180 PF07670 Nucleoside recognition HK442_RS04190 PF00813 FliP family HK442_RS04195 PF12804 MobA-like NTP transferase domain HK442_RS04195 PF14602 Hexapeptide repeat of succinyl-transferase HK442_RS04210 PF00317 Ribonucleotide reductase, all-alpha domain HK442_RS04210 PF02867 Ribonucleotide reductase, barrel domain HK442_RS04210 PF03477 ATP cone domain HK442_RS04215 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HK442_RS04215 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HK442_RS04220 PF01925 Sulfite exporter TauE/SafE HK442_RS04225 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HK442_RS04225 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HK442_RS04230 PF18644 Phage integrase SAM-like domain HK442_RS04230 PF00589 Phage integrase family HK442_RS04240 PF00155 Aminotransferase class I and II HK442_RS04260 PF02754 Cysteine-rich domain HK442_RS04265 PF04055 Radical SAM superfamily HK442_RS04265 PF06969 HemN C-terminal domain HK442_RS04270 PF10788 Protein of unknown function (DUF2603) HK442_RS04275 PF01264 Chorismate synthase HK442_RS04280 PF14622 Ribonuclease-III-like HK442_RS04280 PF00035 Double-stranded RNA binding motif HK442_RS04285 PF00075 RNase H HK442_RS04300 PF02934 GatB/GatE catalytic domain HK442_RS04300 PF02637 GatB domain HK442_RS04310 PF04055 Radical SAM superfamily HK442_RS04315 PF01103 Surface antigen HK442_RS04315 PF07244 Surface antigen variable number repeat HK442_RS04320 PF04055 Radical SAM superfamily HK442_RS04325 PF00210 Ferritin-like domain HK442_RS04345 PF10415 Fumarase C C-terminus HK442_RS04345 PF00206 Lyase HK442_RS04350 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HK442_RS04360 PF00483 Nucleotidyl transferase HK442_RS04365 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain HK442_RS04365 PF01464 Transglycosylase SLT domain HK442_RS04375 PF00749 tRNA synthetases class I (E and Q), catalytic domain HK442_RS04395 PF06508 Queuosine biosynthesis protein QueC HK442_RS04420 PF01750 Hydrogenase maturation protease HK442_RS04425 PF01292 Prokaryotic cytochrome b561 HK442_RS04430 PF00374 Nickel-dependent hydrogenase HK442_RS04435 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal HK442_RS04435 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HK442_RS04435 PF10518 TAT (twin-arginine translocation) pathway signal sequence HK442_RS04440 PF02525 Flavodoxin-like fold HK442_RS04455 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle HK442_RS04455 PF14602 Hexapeptide repeat of succinyl-transferase HK442_RS04460 PF04551 GcpE protein HK442_RS04465 PF00155 Aminotransferase class I and II HK442_RS04470 PF01225 Mur ligase family, catalytic domain HK442_RS04470 PF02875 Mur ligase family, glutamate ligase domain HK442_RS04470 PF08245 Mur ligase middle domain HK442_RS04480 PF00488 MutS domain V HK442_RS04480 PF01713 Smr domain HK442_RS04485 PF00719 Inorganic pyrophosphatase HK442_RS04505 PF01336 OB-fold nucleic acid binding domain HK442_RS04505 PF02938 GAD domain HK442_RS04505 PF00152 tRNA synthetases class II (D, K and N) HK442_RS04510 PF01584 CheW-like domain HK442_RS04510 PF00072 Response regulator receiver domain HK442_RS04515 PF03120 NAD-dependent DNA ligase OB-fold domain HK442_RS04515 PF01653 NAD-dependent DNA ligase adenylation domain HK442_RS04515 PF00533 BRCA1 C Terminus (BRCT) domain HK442_RS04525 PF00005 ABC transporter HK442_RS04535 PF08502 LeuA allosteric (dimerisation) domain HK442_RS04535 PF00682 HMGL-like HK442_RS04545 PF00873 AcrB/AcrD/AcrF family HK442_RS04560 PF01208 Uroporphyrinogen decarboxylase (URO-D) HK442_RS04575 PF00700 Bacterial flagellin C-terminal helical region HK442_RS04575 PF00669 Bacterial flagellin N-terminal helical region HK442_RS04575 PF07196 Flagellin hook IN motif HK442_RS04580 PF00005 ABC transporter HK442_RS04585 PF12729 Four helix bundle sensory module for signal transduction HK442_RS04585 PF00672 HAMP domain HK442_RS04585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HK442_RS04590 PF00155 Aminotransferase class I and II HK442_RS04595 PF00912 Transglycosylase HK442_RS04595 PF00905 Penicillin binding protein transpeptidase domain HK442_RS04620 PF18273 Type III R-M EcoP15I C-terminal domain HK442_RS04620 PF01555 DNA methylase HK442_RS04625 PF04851 Type III restriction enzyme, res subunit HK442_RS04625 PF08774 VRR-NUC domain HK442_RS04635 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HK442_RS04640 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HK442_RS04640 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HK442_RS04640 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HK442_RS04660 PF04023 FeoA domain HK442_RS04665 PF00730 HhH-GPD superfamily base excision DNA repair protein HK442_RS04665 PF00633 Helix-hairpin-helix motif HK442_RS04670 PF04509 CheC-like family HK442_RS04670 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HK442_RS04705 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HK442_RS04705 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HK442_RS04710 PF10502 Signal peptidase, peptidase S26 HK442_RS04715 PF02163 Peptidase family M50 HK442_RS04720 PF02502 Ribose/Galactose Isomerase HK442_RS04730 PF00156 Phosphoribosyl transferase domain HK442_RS04740 PF00883 Cytosol aminopeptidase family, catalytic domain HK442_RS04745 PF06071 Protein of unknown function (DUF933) HK442_RS04745 PF01926 50S ribosome-binding GTPase HK442_RS04755 PF01594 AI-2E family transporter HK442_RS04760 PF01678 Diaminopimelate epimerase HK442_RS04765 PF04224 Protein of unknown function, DUF417 HK442_RS04780 PF01165 Ribosomal protein S21 HK442_RS04790 PF00550 Phosphopantetheine attachment site HK442_RS04795 PF02801 Beta-ketoacyl synthase, C-terminal domain HK442_RS04795 PF00109 Beta-ketoacyl synthase, N-terminal domain HK442_RS04800 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HK442_RS04820 PF08032 RNA 2'-O ribose methyltransferase substrate binding HK442_RS04820 PF00588 SpoU rRNA Methylase family HK442_RS04825 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HK442_RS04830 PF01197 Ribosomal protein L31 HK442_RS04835 PF07498 Rho termination factor, N-terminal domain HK442_RS04835 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HK442_RS04835 PF07497 Rho termination factor, RNA-binding domain HK442_RS04840 PF01177 Asp/Glu/Hydantoin racemase HK442_RS04850 PF00120 Glutamine synthetase, catalytic domain HK442_RS04850 PF03951 Glutamine synthetase, beta-Grasp domain HK442_RS04860 PF01281 Ribosomal protein L9, N-terminal domain HK442_RS04860 PF03948 Ribosomal protein L9, C-terminal domain HK442_RS04865 PF00227 Proteasome subunit HK442_RS04870 PF10431 C-terminal, D2-small domain, of ClpB protein HK442_RS04870 PF07724 AAA domain (Cdc48 subfamily) HK442_RS04875 PF01926 50S ribosome-binding GTPase HK442_RS04875 PF07650 KH domain HK442_RS04920 PF01113 Dihydrodipicolinate reductase, N-terminus HK442_RS04920 PF05173 Dihydrodipicolinate reductase, C-terminus HK442_RS04925 PF02913 FAD linked oxidases, C-terminal domain HK442_RS04925 PF01565 FAD binding domain HK442_RS04930 PF15437 Plasminogen-binding protein pgbA C-terminal HK442_RS04930 PF15436 Plasminogen-binding protein pgbA N-terminal HK442_RS04940 PF10145 Phage-related minor tail protein HK442_RS04940 PF01464 Transglycosylase SLT domain HK442_RS04940 PF01551 Peptidase family M23 HK442_RS04950 PF01751 Toprim domain HK442_RS04950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HK442_RS04950 PF00204 DNA gyrase B HK442_RS04950 PF00986 DNA gyrase B subunit, carboxyl terminus HK442_RS04955 PF02767 DNA polymerase III beta subunit, central domain HK442_RS04955 PF00712 DNA polymerase III beta subunit, N-terminal domain HK442_RS04955 PF02768 DNA polymerase III beta subunit, C-terminal domain HK442_RS04960 PF02253 Phospholipase A1 HK442_RS04965 PF00209 Sodium:neurotransmitter symporter family HK442_RS04970 PF00209 Sodium:neurotransmitter symporter family HK442_RS04975 PF03061 Thioesterase superfamily HK442_RS04980 PF04359 Protein of unknown function (DUF493) HK442_RS04985 PF08245 Mur ligase middle domain HK442_RS04985 PF02875 Mur ligase family, glutamate ligase domain HK442_RS04990 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HK442_RS04990 PF00953 Glycosyl transferase family 4 HK442_RS05000 PF00830 Ribosomal L28 family HK442_RS05035 PF01330 RuvA N terminal domain HK442_RS05035 PF07499 RuvA, C-terminal domain HK442_RS05045 PF03023 Lipid II flippase MurJ HK442_RS05050 PF09190 DALR domain HK442_RS05050 PF01406 tRNA synthetases class I (C) catalytic domain HK442_RS05055 PF03797 Autotransporter beta-domain HK442_RS05055 PF02691 Vacuolating cyotoxin HK442_RS05060 PF00005 ABC transporter HK442_RS05065 PF01032 FecCD transport family HK442_RS05070 PF00106 short chain dehydrogenase HK442_RS05075 PF03061 Thioesterase superfamily HK442_RS05110 PF01924 Hydrogenase formation hypA family HK442_RS05115 PF01455 HupF/HypC family HK442_RS05120 PF02492 CobW/HypB/UreG, nucleotide-binding domain HK442_RS05135 PF01515 Phosphate acetyl/butaryl transferase HK442_RS05140 PF01515 Phosphate acetyl/butaryl transferase HK442_RS05150 PF13860 FlgD Ig-like domain HK442_RS05150 PF03963 Flagellar hook capping protein - N-terminal region HK442_RS05150 PF13861 FlgD Tudor-like domain HK442_RS05155 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HK442_RS05155 PF00460 Flagella basal body rod protein HK442_RS05155 PF07559 Flagellar basal body protein FlaE HK442_RS05155 PF07559 Flagellar basal body protein FlaE HK442_RS05155 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HK442_RS05155 PF00460 Flagella basal body rod protein HK442_RS05165 PF02384 N-6 DNA Methylase HK442_RS05165 PF07669 Eco57I restriction-modification methylase HK442_RS05170 PF13361 UvrD-like helicase C-terminal domain HK442_RS05170 PF00580 UvrD/REP helicase N-terminal domain HK442_RS05205 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HK442_RS05205 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HK442_RS05205 PF02142 MGS-like domain HK442_RS05210 PF01027 Inhibitor of apoptosis-promoting Bax1 HK442_RS05215 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HK442_RS05215 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HK442_RS05220 PF03797 Autotransporter beta-domain HK442_RS05220 PF02691 Vacuolating cyotoxin HK442_RS05230 PF01361 Tautomerase enzyme HK442_RS05235 PF02132 RecR protein HK442_RS05240 PF01142 tRNA pseudouridine synthase D (TruD) HK442_RS05245 PF01435 Peptidase family M48 HK442_RS05250 PF01227 GTP cyclohydrolase I HK442_RS05255 PF00348 Polyprenyl synthetase HK442_RS05260 PF01975 Survival protein SurE HK442_RS05270 PF01242 6-pyruvoyl tetrahydropterin synthase HK442_RS05290 PF07690 Major Facilitator Superfamily HK442_RS05305 PF00528 Binding-protein-dependent transport system inner membrane component HK442_RS05310 PF00497 Bacterial extracellular solute-binding proteins, family 3 HK442_RS05315 PF00842 Alanine racemase, C-terminal domain HK442_RS05315 PF01168 Alanine racemase, N-terminal domain HK442_RS05320 PF01235 Sodium:alanine symporter family HK442_RS05325 PF01266 FAD dependent oxidoreductase HK442_RS05330 PF01042 Endoribonuclease L-PSP HK442_RS05355 PF03553 Na+/H+ antiporter family HK442_RS05370 PF02590 Predicted SPOUT methyltransferase HK442_RS05375 PF17848 Acetyl-coA carboxylase zinc finger domain HK442_RS05375 PF01039 Carboxyl transferase domain HK442_RS05385 PF00994 Probable molybdopterin binding domain HK442_RS05385 PF18146 Damage-inducible protein CinA KH domain HK442_RS05385 PF02464 Competence-damaged protein HK442_RS05395 PF00881 Nitroreductase family HK442_RS05400 PF01790 Prolipoprotein diacylglyceryl transferase HK442_RS05405 PF00849 RNA pseudouridylate synthase HK442_RS05410 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HK442_RS05410 PF02390 Putative methyltransferase HK442_RS05420 PF01784 NIF3 (NGG1p interacting factor 3) HK442_RS05425 PF02091 Glycyl-tRNA synthetase alpha subunit HK442_RS05430 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HK442_RS05430 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HK442_RS05440 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HK442_RS05440 PF01926 50S ribosome-binding GTPase HK442_RS05455 PF00873 AcrB/AcrD/AcrF family HK442_RS05470 PF02092 Glycyl-tRNA synthetase beta subunit HK442_RS05480 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HK442_RS05480 PF01676 Metalloenzyme superfamily HK442_RS05485 PF02686 Glu-tRNAGln amidotransferase C subunit HK442_RS05490 PF00202 Aminotransferase class-III HK442_RS05500 PF02491 SHS2 domain inserted in FTSA HK442_RS05505 PF12327 FtsZ family, C-terminal domain HK442_RS05505 PF00091 Tubulin/FtsZ family, GTPase domain HK442_RS05520 PF00924 Mechanosensitive ion channel HK442_RS05600 PF07282 Putative transposase DNA-binding domain HK442_RS05600 PF12323 Helix-turn-helix domain HK442_RS05600 PF01385 Probable transposase HK442_RS05620 PF03135 CagE, TrbE, VirB family, component of type IV transporter system HK442_RS05625 PF01751 Toprim domain HK442_RS05625 PF01131 DNA topoisomerase HK442_RS05665 PF00437 Type II/IV secretion system protein HK442_RS05685 PF02534 Type IV secretory system Conjugative DNA transfer HK442_RS05690 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ HK442_RS05715 PF13614 AAA domain HK442_RS05750 PF18644 Phage integrase SAM-like domain HK442_RS05750 PF00589 Phage integrase family HK442_RS05765 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system HK442_RS05775 PF17810 Arginine decarboxylase helical bundle domain HK442_RS05775 PF17944 Arginine decarboxylase C-terminal helical extension HK442_RS05775 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HK442_RS05790 PF08003 Protein of unknown function (DUF1698) HK442_RS05800 PF01588 Putative tRNA binding domain HK442_RS05800 PF09334 tRNA synthetases class I (M) HK442_RS05800 PF00133 tRNA synthetases class I (I, L, M and V) HK442_RS05810 PF00924 Mechanosensitive ion channel HK442_RS05840 PF02540 NAD synthase HK442_RS05840 PF00958 GMP synthase C terminal domain HK442_RS05840 PF00117 Glutamine amidotransferase class-I HK442_RS05850 PF00384 Molybdopterin oxidoreductase HK442_RS05850 PF18364 Molybdopterin oxidoreductase N-terminal domain HK442_RS05850 PF01568 Molydopterin dinucleotide binding domain HK442_RS05860 PF02347 Glycine cleavage system P-protein HK442_RS05865 PF01230 HIT domain HK442_RS05870 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HK442_RS05870 PF01409 tRNA synthetases class II core domain (F) HK442_RS05875 PF01588 Putative tRNA binding domain HK442_RS05875 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HK442_RS05875 PF03147 Ferredoxin-fold anticodon binding domain HK442_RS05875 PF03484 tRNA synthetase B5 domain HK442_RS05880 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HK442_RS05885 PF02401 LytB protein HK442_RS05890 PF00575 S1 RNA binding domain HK442_RS05900 PF01842 ACT domain HK442_RS05900 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HK442_RS05900 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HK442_RS05905 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HK442_RS05910 PF01168 Alanine racemase, N-terminal domain HK442_RS05920 PF01584 CheW-like domain HK442_RS05920 PF00072 Response regulator receiver domain HK442_RS05925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HK442_RS05925 PF00072 Response regulator receiver domain HK442_RS05925 PF01627 Hpt domain HK442_RS05925 PF02895 Signal transducing histidine kinase, homodimeric domain HK442_RS05925 PF01584 CheW-like domain HK442_RS05930 PF01584 CheW-like domain HK442_RS05935 PF08534 Redoxin HK442_RS05940 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HK442_RS05940 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HK442_RS05945 PF13649 Methyltransferase domain HK442_RS05950 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HK442_RS05950 PF18074 Primosomal protein N C-terminal domain HK442_RS05950 PF17764 3′ DNA-binding domain (3′BD) HK442_RS05950 PF00271 Helicase conserved C-terminal domain HK442_RS05950 PF00270 DEAD/DEAH box helicase HK442_RS05975 PF01435 Peptidase family M48 HK442_RS05980 PF05175 Methyltransferase small domain HK442_RS05980 PF17827 PrmC N-terminal domain HK442_RS05985 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HK442_RS05985 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HK442_RS05995 PF01578 Cytochrome C assembly protein HK442_RS05995 PF05140 ResB-like family HK442_RS06005 PF00762 Ferrochelatase HK442_RS06015 PF04452 RNA methyltransferase HK442_RS06025 PF00692 dUTPase HK442_RS06030 PF00364 Biotin-requiring enzyme HK442_RS06035 PF02785 Biotin carboxylase C-terminal domain HK442_RS06035 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HK442_RS06035 PF00289 Biotin carboxylase, N-terminal domain HK442_RS06065 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HK442_RS06075 PF00268 Ribonucleotide reductase, small chain HK442_RS06090 PF01416 tRNA pseudouridine synthase HK442_RS06095 PF01370 NAD dependent epimerase/dehydratase family HK442_RS06120 PF12323 Helix-turn-helix domain HK442_RS06120 PF01385 Probable transposase HK442_RS06120 PF07282 Putative transposase DNA-binding domain HK442_RS06135 PF08238 Sel1 repeat HK442_RS06140 PF01081 KDPG and KHG aldolase HK442_RS06145 PF00920 Dehydratase family HK442_RS06150 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain HK442_RS06150 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain HK442_RS06155 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HK442_RS06160 PF02685 Glucokinase HK442_RS06165 PF00107 Zinc-binding dehydrogenase HK442_RS06165 PF08240 Alcohol dehydrogenase GroES-like domain HK442_RS06185 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HK442_RS06195 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HK442_RS06195 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HK442_RS06200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HK442_RS06205 PF00206 Lyase HK442_RS06205 PF10397 Adenylosuccinate lyase C-terminus HK442_RS06215 PF17757 UvrB interaction domain HK442_RS06215 PF12344 Ultra-violet resistance protein B HK442_RS06215 PF02151 UvrB/uvrC motif HK442_RS06215 PF04851 Type III restriction enzyme, res subunit HK442_RS06215 PF00271 Helicase conserved C-terminal domain HK442_RS06245 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HK442_RS06245 PF00460 Flagella basal body rod protein HK442_RS06245 PF07559 Flagellar basal body protein FlaE HK442_RS06255 PF00145 C-5 cytosine-specific DNA methylase HK442_RS06270 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HK442_RS06280 PF00691 OmpA family HK442_RS06285 PF07676 WD40-like Beta Propeller Repeat HK442_RS06295 PF02472 Biopolymer transport protein ExbD/TolR HK442_RS06300 PF01618 MotA/TolQ/ExbB proton channel family HK442_RS06305 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HK442_RS06310 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HK442_RS06310 PF02874 ATP synthase alpha/beta family, beta-barrel domain HK442_RS06315 PF00231 ATP synthase HK442_RS06320 PF00306 ATP synthase alpha/beta chain, C terminal domain HK442_RS06320 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HK442_RS06320 PF02874 ATP synthase alpha/beta family, beta-barrel domain HK442_RS06330 PF00430 ATP synthase B/B' CF(0) HK442_RS06340 PF02195 ParB-like nuclease domain HK442_RS06340 PF17762 HTH domain found in ParB protein HK442_RS06345 PF13614 AAA domain HK442_RS06350 PF03099 Biotin/lipoate A/B protein ligase family HK442_RS06350 PF03309 Type III pantothenate kinase HK442_RS06350 PF02237 Biotin protein ligase C terminal domain HK442_RS06355 PF02911 Formyl transferase, C-terminal domain HK442_RS06355 PF00551 Formyl transferase HK442_RS06390 PF01245 Ribosomal protein L19 HK442_RS06395 PF01746 tRNA (Guanine-1)-methyltransferase HK442_RS06400 PF05239 PRC-barrel domain HK442_RS06400 PF01782 RimM N-terminal domain HK442_RS06410 PF00886 Ribosomal protein S16 HK442_RS06415 PF00448 SRP54-type protein, GTPase domain HK442_RS06415 PF02881 SRP54-type protein, helical bundle domain HK442_RS06415 PF02978 Signal peptide binding domain HK442_RS06420 PF10458 Valyl tRNA synthetase tRNA binding arm HK442_RS06420 PF00133 tRNA synthetases class I (I, L, M and V) HK442_RS06420 PF08264 Anticodon-binding domain of tRNA HK442_RS06425 PF02623 FliW protein HK442_RS06430 PF03033 Glycosyltransferase family 28 N-terminal domain HK442_RS06430 PF04101 Glycosyltransferase family 28 C-terminal domain HK442_RS06445 PF03807 NADP oxidoreductase coenzyme F420-dependent HK442_RS06445 PF14748 Pyrroline-5-carboxylate reductase dimerisation HK442_RS06450 PF02661 Fic/DOC family HK442_RS06455 PF02130 Uncharacterized protein family UPF0054 HK442_RS06460 PF00258 Flavodoxin HK442_RS06475 PF07992 Pyridine nucleotide-disulphide oxidoreductase HK442_RS06485 PF00342 Phosphoglucose isomerase HK442_RS06495 PF02554 Carbon starvation protein CstA HK442_RS06495 PF13722 5TM C-terminal transporter carbon starvation CstA HK442_RS06500 PF00528 Binding-protein-dependent transport system inner membrane component HK442_RS06505 PF00528 Binding-protein-dependent transport system inner membrane component HK442_RS06510 PF00005 ABC transporter HK442_RS06525 PF07690 Major Facilitator Superfamily HK442_RS06530 PF00860 Permease family HK442_RS06550 PF01048 Phosphorylase superfamily HK442_RS06555 PF01676 Metalloenzyme superfamily HK442_RS06570 PF07690 Major Facilitator Superfamily HK442_RS06575 PF01171 PP-loop family HK442_RS06580 PF00999 Sodium/hydrogen exchanger family HK442_RS06580 PF02080 TrkA-C domain HK442_RS06580 PF02254 TrkA-N domain HK442_RS06590 PF07690 Major Facilitator Superfamily HK442_RS06595 PF00194 Eukaryotic-type carbonic anhydrase HK442_RS06605 PF01118 Semialdehyde dehydrogenase, NAD binding domain HK442_RS06605 PF02774 Semialdehyde dehydrogenase, dimerisation domain HK442_RS06610 PF13393 Histidyl-tRNA synthetase HK442_RS06610 PF03129 Anticodon binding domain HK442_RS06625 PF00248 Aldo/keto reductase family HK442_RS06630 PF03764 Elongation factor G, domain IV HK442_RS06630 PF00009 Elongation factor Tu GTP binding domain HK442_RS06630 PF03144 Elongation factor Tu domain 2 HK442_RS06630 PF00679 Elongation factor G C-terminus HK442_RS06630 PF14492 Elongation Factor G, domain II HK442_RS06635 PF00177 Ribosomal protein S7p/S5e HK442_RS06640 PF00164 Ribosomal protein S12/S23 HK442_RS06645 PF00562 RNA polymerase Rpb2, domain 6 HK442_RS06645 PF04561 RNA polymerase Rpb2, domain 2 HK442_RS06645 PF04997 RNA polymerase Rpb1, domain 1 HK442_RS06645 PF00623 RNA polymerase Rpb1, domain 2 HK442_RS06645 PF04565 RNA polymerase Rpb2, domain 3 HK442_RS06645 PF04983 RNA polymerase Rpb1, domain 3 HK442_RS06645 PF04998 RNA polymerase Rpb1, domain 5 HK442_RS06645 PF05000 RNA polymerase Rpb1, domain 4 HK442_RS06645 PF10385 RNA polymerase beta subunit external 1 domain HK442_RS06645 PF04563 RNA polymerase beta subunit HK442_RS06645 PF04560 RNA polymerase Rpb2, domain 7 HK442_RS06650 PF00542 Ribosomal protein L7/L12 C-terminal domain HK442_RS06650 PF16320 Ribosomal protein L7/L12 dimerisation domain HK442_RS06655 PF00466 Ribosomal protein L10 HK442_RS06660 PF00687 Ribosomal protein L1p/L10e family HK442_RS06665 PF00298 Ribosomal protein L11, RNA binding domain HK442_RS06665 PF03946 Ribosomal protein L11, N-terminal domain HK442_RS06670 PF02357 Transcription termination factor nusG HK442_RS06685 PF00471 Ribosomal protein L33 HK442_RS06690 PF03143 Elongation factor Tu C-terminal domain HK442_RS06690 PF03144 Elongation factor Tu domain 2 HK442_RS06690 PF00009 Elongation factor Tu GTP binding domain HK442_RS06715 PF00664 ABC transporter transmembrane region HK442_RS06715 PF00005 ABC transporter HK442_RS06725 PF02086 D12 class N6 adenine-specific DNA methyltransferase HK442_RS06735 PF00132 Bacterial transferase hexapeptide (six repeats) HK442_RS06750 PF00137 ATP synthase subunit C HK442_RS06760 PF00575 S1 RNA binding domain HK442_RS06760 PF00013 KH domain HK442_RS06760 PF01138 3' exoribonuclease family, domain 1 HK442_RS06760 PF03725 3' exoribonuclease family, domain 2 HK442_RS06770 PF04453 LPS transport system D HK442_RS06770 PF03968 OstA-like protein HK442_RS06780 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HK442_RS06780 PF02843 Phosphoribosylglycinamide synthetase, C domain HK442_RS06780 PF02844 Phosphoribosylglycinamide synthetase, N domain HK442_RS06795 PF00005 ABC transporter HK442_RS06800 PF01255 Putative undecaprenyl diphosphate synthase HK442_RS06820 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HK442_RS06825 PF04055 Radical SAM superfamily HK442_RS06830 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HK442_RS06835 PF00293 NUDIX domain HK442_RS06840 PF13840 ACT domain HK442_RS06840 PF00696 Amino acid kinase family HK442_RS06840 PF01842 ACT domain HK442_RS06850 PF12169 DNA polymerase III subunits gamma and tau domain III HK442_RS06855 PF00809 Pterin binding enzyme HK442_RS06865 PF00892 EamA-like transporter family HK442_RS06880 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HK442_RS06880 PF00117 Glutamine amidotransferase class-I HK442_RS06885 PF00795 Carbon-nitrogen hydrolase HK442_RS06895 PF02545 Maf-like protein HK442_RS06900 PF02272 DHHA1 domain HK442_RS06900 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HK442_RS06900 PF01411 tRNA synthetases class II (A) HK442_RS06915 PF01084 Ribosomal protein S18 HK442_RS06920 PF00436 Single-strand binding protein family HK442_RS06925 PF01250 Ribosomal protein S6 HK442_RS06930 PF06144 DNA polymerase III, delta subunit HK442_RS06935 PF00773 RNB domain HK442_RS06940 PF08501 Shikimate dehydrogenase substrate binding domain HK442_RS06950 PF00528 Binding-protein-dependent transport system inner membrane component HK442_RS06955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HK442_RS06960 PF00579 tRNA synthetases class I (W and Y) HK442_RS06970 PF03840 Preprotein translocase SecG subunit HK442_RS06975 PF01765 Ribosome recycling factor HK442_RS06980 PF00156 Phosphoribosyl transferase domain HK442_RS06990 PF02146 Sir2 family HK442_RS06995 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HK442_RS07000 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HK442_RS07005 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HK442_RS07010 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HK442_RS07025 PF00384 Molybdopterin oxidoreductase HK442_RS07025 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HK442_RS07025 PF12838 4Fe-4S dicluster domain HK442_RS07025 PF01568 Molydopterin dinucleotide binding domain HK442_RS07025 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HK442_RS07030 PF00146 NADH dehydrogenase HK442_RS07035 PF12838 4Fe-4S dicluster domain HK442_RS07040 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HK442_RS07045 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HK442_RS07050 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HK442_RS07050 PF00361 Proton-conducting membrane transporter HK442_RS07055 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus HK442_RS07055 PF00361 Proton-conducting membrane transporter HK442_RS07060 PF00361 Proton-conducting membrane transporter HK442_RS07070 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HK442_RS07070 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HK442_RS07070 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HK442_RS07070 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HK442_RS07095 PF00290 Tryptophan synthase alpha chain HK442_RS07100 PF00291 Pyridoxal-phosphate dependent enzyme HK442_RS07105 PF00218 Indole-3-glycerol phosphate synthase HK442_RS07105 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HK442_RS07110 PF02885 Glycosyl transferase family, helical bundle domain HK442_RS07110 PF00591 Glycosyl transferase family, a/b domain HK442_RS07115 PF00117 Glutamine amidotransferase class-I HK442_RS07120 PF00425 chorismate binding enzyme HK442_RS07120 PF04715 Anthranilate synthase component I, N terminal region HK442_RS07135 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HK442_RS07145 PF04264 YceI-like domain HK442_RS07150 PF03070 TENA/THI-4/PQQC family HK442_RS07170 PF04973 Nicotinamide mononucleotide transporter HK442_RS07180 PF01196 Ribosomal protein L17 HK442_RS07185 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HK442_RS07185 PF01000 RNA polymerase Rpb3/RpoA insert domain HK442_RS07185 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HK442_RS07190 PF00163 Ribosomal protein S4/S9 N-terminal domain HK442_RS07190 PF01479 S4 domain HK442_RS07195 PF00411 Ribosomal protein S11 HK442_RS07200 PF00416 Ribosomal protein S13/S18 HK442_RS07205 PF00444 Ribosomal protein L36 HK442_RS07210 PF01176 Translation initiation factor 1A / IF-1 HK442_RS07215 PF00557 Metallopeptidase family M24 HK442_RS07220 PF00344 SecY translocase HK442_RS07225 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HK442_RS07230 PF03719 Ribosomal protein S5, C-terminal domain HK442_RS07230 PF00333 Ribosomal protein S5, N-terminal domain HK442_RS07235 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HK442_RS07240 PF00347 Ribosomal protein L6 HK442_RS07245 PF00410 Ribosomal protein S8 HK442_RS07250 PF00253 Ribosomal protein S14p/S29e HK442_RS07255 PF00673 ribosomal L5P family C-terminus HK442_RS07255 PF00281 Ribosomal protein L5 HK442_RS07260 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HK442_RS07260 PF00467 KOW motif HK442_RS07265 PF00238 Ribosomal protein L14p/L23e HK442_RS07270 PF00366 Ribosomal protein S17 HK442_RS07275 PF00831 Ribosomal L29 protein HK442_RS07280 PF00252 Ribosomal protein L16p/L10e HK442_RS07285 PF00189 Ribosomal protein S3, C-terminal domain HK442_RS07285 PF07650 KH domain HK442_RS07290 PF00237 Ribosomal protein L22p/L17e HK442_RS07295 PF00203 Ribosomal protein S19 HK442_RS07300 PF00181 Ribosomal Proteins L2, RNA binding domain HK442_RS07300 PF03947 Ribosomal Proteins L2, C-terminal domain HK442_RS07305 PF00276 Ribosomal protein L23 HK442_RS07310 PF00573 Ribosomal protein L4/L1 family HK442_RS07315 PF00297 Ribosomal protein L3 HK442_RS07320 PF00338 Ribosomal protein S10p/S20e HK442_RS07335 PF01351 Ribonuclease HII HK442_RS07345 PF00206 Lyase HK442_RS07345 PF10415 Fumarase C C-terminus HK442_RS07360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HK442_RS07360 PF00529 HlyD membrane-fusion protein of T1SS HK442_RS07365 PF00873 AcrB/AcrD/AcrF family HK442_RS07370 PF05437 Branched-chain amino acid transport protein (AzlD) HK442_RS07375 PF03591 AzlC protein HK442_RS07380 PF00226 DnaJ domain HK442_RS07380 PF01556 DnaJ C terminal domain HK442_RS07380 PF00684 DnaJ central domain HK442_RS07405 PF01467 Cytidylyltransferase-like HK442_RS07410 PF08753 NikR C terminal nickel binding domain HK442_RS07410 PF01402 Ribbon-helix-helix protein, copG family HK442_RS07415 PF01618 MotA/TolQ/ExbB proton channel family HK442_RS07420 PF02472 Biopolymer transport protein ExbD/TolR HK442_RS07425 PF03544 Gram-negative bacterial TonB protein C-terminal HK442_RS07435 PF03741 Integral membrane protein TerC family HK442_RS07440 PF01544 CorA-like Mg2+ transporter protein HK442_RS07445 PF00162 Phosphoglycerate kinase HK442_RS07450 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HK442_RS07450 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HK442_RS07455 PF03167 Uracil DNA glycosylase superfamily HK442_RS07460 PF01553 Acyltransferase HK442_RS07470 PF13180 PDZ domain HK442_RS07470 PF03572 Peptidase family S41 HK442_RS07485 PF01555 DNA methylase HK442_RS07485 PF18755 Restriction Enzyme Adenine Methylase Associated HK442_RS07500 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HK442_RS07500 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HK442_RS07505 PF02445 Quinolinate synthetase A protein HK442_RS07510 PF02666 Phosphatidylserine decarboxylase HK442_RS07525 PF01040 UbiA prenyltransferase family HK442_RS07535 PF03796 DnaB-like helicase C terminal domain HK442_RS07535 PF00772 DnaB-like helicase N terminal domain HK442_RS07540 PF01256 Carbohydrate kinase HK442_RS07540 PF03853 YjeF-related protein N-terminus HK442_RS07545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HK442_RS07550 PF00072 Response regulator receiver domain HK442_RS07550 PF00486 Transcriptional regulatory protein, C terminal HK442_RS07555 PF01555 DNA methylase HK442_RS07575 PF10431 C-terminal, D2-small domain, of ClpB protein HK442_RS07575 PF07724 AAA domain (Cdc48 subfamily) HK442_RS07580 PF00132 Bacterial transferase hexapeptide (six repeats) HK442_RS07580 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HK442_RS07585 PF07977 FabA-like domain HK442_RS07590 PF02623 FliW protein HK442_RS07595 PF13525 Outer membrane lipoprotein HK442_RS07600 PF00004 ATPase family associated with various cellular activities (AAA) HK442_RS07600 PF05362 Lon protease (S16) C-terminal proteolytic domain HK442_RS07600 PF02190 ATP-dependent protease La (LON) substrate-binding domain HK442_RS07605 PF01842 ACT domain HK442_RS07605 PF02153 Prephenate dehydrogenase HK442_RS07615 PF01555 DNA methylase HK442_RS07620 PF04851 Type III restriction enzyme, res subunit HK442_RS07630 PF04055 Radical SAM superfamily HK442_RS07630 PF06968 Biotin and Thiamin Synthesis associated domain HK442_RS07635 PF03631 Virulence factor BrkB HK442_RS07670 PF14489 QueF-like protein HK442_RS07700 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HK442_RS07705 PF01313 Bacterial export proteins, family 3 HK442_RS07710 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HK442_RS07710 PF18269 T3SS EscN ATPase C-terminal domain HK442_RS07715 PF00437 Type II/IV secretion system protein HK442_RS07720 PF08264 Anticodon-binding domain of tRNA HK442_RS07720 PF00133 tRNA synthetases class I (I, L, M and V) HK442_RS07725 PF01479 S4 domain HK442_RS07745 PF04055 Radical SAM superfamily HK442_RS07750 PF00571 CBS domain HK442_RS07750 PF01380 SIS domain HK442_RS07755 PF00753 Metallo-beta-lactamase superfamily HK442_RS07755 PF17770 Ribonuclease J C-terminal domain HK442_RS07755 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HK442_RS07760 PF00398 Ribosomal RNA adenine dimethylase HK442_RS07770 PF01420 Type I restriction modification DNA specificity domain HK442_RS07775 PF01842 ACT domain HK442_RS07775 PF00551 Formyl transferase HK442_RS07820 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HK442_RS07825 PF02599 Global regulator protein family HK442_RS07830 PF00288 GHMP kinases N terminal domain HK442_RS07835 PF01668 SmpB protein HK442_RS07840 PF01618 MotA/TolQ/ExbB proton channel family HK442_RS07845 PF02472 Biopolymer transport protein ExbD/TolR HK442_RS07850 PF00468 Ribosomal protein L34 HK442_RS07855 PF00825 Ribonuclease P HK442_RS07860 PF01809 Putative membrane protein insertion efficiency factor HK442_RS07865 PF14849 YidC periplasmic domain HK442_RS07865 PF02096 60Kd inner membrane protein HK442_RS07875 PF01926 50S ribosome-binding GTPase HK442_RS07875 PF12631 MnmE helical domain HK442_RS07875 PF10396 GTP-binding protein TrmE N-terminus HK442_RS07905 PF02511 Thymidylate synthase complementing protein HK442_RS07910 PF01380 SIS domain HK442_RS07915 PF10398 Protein of unknown function (DUF2443) HK442_RS07930 PF12728 Helix-turn-helix domain HK442_RS07930 PF02661 Fic/DOC family HK442_RS07945 PF07282 Putative transposase DNA-binding domain HK442_RS07945 PF01385 Probable transposase HK442_RS07945 PF12323 Helix-turn-helix domain HK442_RS07955 PF03432 Relaxase/Mobilisation nuclease domain