locus-tag class description HG564_RS00005 PF01029 NusB family HG564_RS00010 PF00885 6,7-dimethyl-8-ribityllumazine synthase HG564_RS00015 PF00793 DAHP synthetase I family HG564_RS00020 PF00484 Carbonic anhydrase HG564_RS00025 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HG564_RS00030 PF02569 Pantoate-beta-alanine ligase HG564_RS00060 PF00118 TCP-1/cpn60 chaperonin family HG564_RS00065 PF00166 Chaperonin 10 Kd subunit HG564_RS00070 PF13662 Toprim domain HG564_RS00070 PF16730 DnaG-primase C-terminal, helicase-binding domain HG564_RS00070 PF01807 CHC2 zinc finger HG564_RS00070 PF08275 DNA primase catalytic core, N-terminal domain HG564_RS00110 PF01584 CheW-like domain HG564_RS00110 PF00072 Response regulator receiver domain HG564_RS00115 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HG564_RS00120 PF01569 PAP2 superfamily HG564_RS00125 PF00884 Sulfatase HG564_RS00125 PF08019 Phosphoethanolamine transferase EptA/EptB HG564_RS00135 PF00285 Citrate synthase, C-terminal domain HG564_RS00140 PF00180 Isocitrate/isopropylmalate dehydrogenase HG564_RS00145 PF07509 Protein of unknown function (DUF1523) HG564_RS00160 PF00582 Universal stress protein family HG564_RS00165 PF02617 ATP-dependent Clp protease adaptor protein ClpS HG564_RS00170 PF00004 ATPase family associated with various cellular activities (AAA) HG564_RS00170 PF07724 AAA domain (Cdc48 subfamily) HG564_RS00170 PF10431 C-terminal, D2-small domain, of ClpB protein HG564_RS00170 PF17871 AAA lid domain HG564_RS00170 PF02861 Clp amino terminal domain, pathogenicity island component HG564_RS00175 PF02261 Aspartate decarboxylase HG564_RS00180 PF02575 YbaB/EbfC DNA-binding family HG564_RS00215 PF00483 Nucleotidyl transferase HG564_RS00215 PF01050 Mannose-6-phosphate isomerase HG564_RS00220 PF16363 GDP-mannose 4,6 dehydratase HG564_RS00225 PF01370 NAD dependent epimerase/dehydratase family HG564_RS00230 PF02769 AIR synthase related protein, C-terminal domain HG564_RS00230 PF00586 AIR synthase related protein, N-terminal domain HG564_RS00235 PF01300 Telomere recombination HG564_RS00235 PF07503 HypF finger HG564_RS00235 PF00708 Acylphosphatase HG564_RS00235 PF17788 HypF Kae1-like domain HG564_RS00240 PF04371 Porphyromonas-type peptidyl-arginine deiminase HG564_RS00245 PF01555 DNA methylase HG564_RS00250 PF01381 Helix-turn-helix HG564_RS00250 PF00145 C-5 cytosine-specific DNA methylase HG564_RS00260 PF01555 DNA methylase HG564_RS00280 PF00474 Sodium:solute symporter family HG564_RS00285 PF18327 Proline utilization A proline dehydrogenase N-terminal domain HG564_RS00285 PF14850 DNA-binding domain of Proline dehydrogenase HG564_RS00285 PF01619 Proline dehydrogenase HG564_RS00285 PF00171 Aldehyde dehydrogenase family HG564_RS00315 PF01774 UreD urease accessory protein HG564_RS00320 PF02492 CobW/HypB/UreG, nucleotide-binding domain HG564_RS00325 PF01730 UreF HG564_RS00330 PF05194 UreE urease accessory protein, C-terminal domain HG564_RS00330 PF02814 UreE urease accessory protein, N-terminal domain HG564_RS00335 PF02293 AmiS/UreI family transporter HG564_RS00340 PF01979 Amidohydrolase family HG564_RS00340 PF00449 Urease alpha-subunit, N-terminal domain HG564_RS00345 PF00699 Urease beta subunit HG564_RS00345 PF00547 Urease, gamma subunit HG564_RS00355 PF01252 Signal peptidase (SPase) II HG564_RS00360 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HG564_RS00360 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HG564_RS00360 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HG564_RS00360 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HG564_RS00365 PF01649 Ribosomal protein S20 HG564_RS00370 PF03462 PCRF domain HG564_RS00370 PF00472 RF-1 domain HG564_RS00390 PF17200 Single Cache domain 2 HG564_RS00390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HG564_RS00390 PF00672 HAMP domain HG564_RS00395 PF00380 Ribosomal protein S9/S16 HG564_RS00400 PF00572 Ribosomal protein L13 HG564_RS00405 PF17402 Family of unknown function (DUF5408) HG564_RS00410 PF06039 Malate:quinone oxidoreductase (Mqo) HG564_RS00420 PF04545 Sigma-70, region 4 HG564_RS00420 PF00140 Sigma-70 factor, region 1.2 HG564_RS00420 PF04542 Sigma-70 region 2 HG564_RS00420 PF04539 Sigma-70 region 3 HG564_RS00425 PF01048 Phosphorylase superfamily HG564_RS00430 PF00698 Acyl transferase domain HG564_RS00440 PF04556 DpnII restriction endonuclease HG564_RS00450 PF01531 Glycosyl transferase family 11 HG564_RS00465 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HG564_RS00465 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HG564_RS00475 PF00291 Pyridoxal-phosphate dependent enzyme HG564_RS00480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HG564_RS00480 PF16591 Helical bimodular sensor domain HG564_RS00480 PF00672 HAMP domain HG564_RS00485 PF02677 Epoxyqueuosine reductase QueH HG564_RS00495 PF00535 Glycosyl transferase family 2 HG564_RS00500 PF00672 HAMP domain HG564_RS00500 PF17200 Single Cache domain 2 HG564_RS00500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HG564_RS00505 PF00149 Calcineurin-like phosphoesterase HG564_RS00505 PF02872 5'-nucleotidase, C-terminal domain HG564_RS00510 PF02664 S-Ribosylhomocysteinase (LuxS) HG564_RS00515 PF01053 Cys/Met metabolism PLP-dependent enzyme HG564_RS00520 PF00291 Pyridoxal-phosphate dependent enzyme HG564_RS00530 PF00012 Hsp70 protein HG564_RS00535 PF01025 GrpE HG564_RS00560 PF00669 Bacterial flagellin N-terminal helical region HG564_RS00560 PF07196 Flagellin hook IN motif HG564_RS00560 PF00700 Bacterial flagellin C-terminal helical region HG564_RS00565 PF01131 DNA topoisomerase HG564_RS00565 PF01751 Toprim domain HG564_RS00565 PF01396 Topoisomerase DNA binding C4 zinc finger HG564_RS00570 PF04055 Radical SAM superfamily HG564_RS00585 PF00391 PEP-utilising enzyme, mobile domain HG564_RS00585 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HG564_RS00585 PF02896 PEP-utilising enzyme, TIM barrel domain HG564_RS00590 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HG564_RS00590 PF03129 Anticodon binding domain HG564_RS00590 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HG564_RS00595 PF05198 Translation initiation factor IF-3, N-terminal domain HG564_RS00595 PF00707 Translation initiation factor IF-3, C-terminal domain HG564_RS00600 PF01632 Ribosomal protein L35 HG564_RS00605 PF00453 Ribosomal protein L20 HG564_RS00630 PF03315 Serine dehydratase beta chain HG564_RS00630 PF03313 Serine dehydratase alpha chain HG564_RS00635 PF03222 Tryptophan/tyrosine permease family HG564_RS00640 PF01474 Class-II DAHP synthetase family HG564_RS00645 PF00578 AhpC/TSA family HG564_RS00650 PF02589 LUD domain HG564_RS00655 PF11870 Domain of unknown function (DUF3390) HG564_RS00655 PF02589 LUD domain HG564_RS00655 PF13183 4Fe-4S dicluster domain HG564_RS00660 PF02754 Cysteine-rich domain HG564_RS00665 PF02652 L-lactate permease HG564_RS00670 PF02652 L-lactate permease HG564_RS00675 PF00633 Helix-hairpin-helix motif HG564_RS00675 PF00730 HhH-GPD superfamily base excision DNA repair protein HG564_RS00675 PF14815 NUDIX domain HG564_RS00680 PF00939 Sodium:sulfate symporter transmembrane region HG564_RS00685 PF00115 Cytochrome C and Quinol oxidase polypeptide I HG564_RS00700 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HG564_RS00700 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP HG564_RS00730 PF00154 recA bacterial DNA recombination protein HG564_RS00735 PF00113 Enolase, C-terminal TIM barrel domain HG564_RS00735 PF03952 Enolase, N-terminal domain HG564_RS00750 PF01202 Shikimate kinase HG564_RS00765 PF08238 Sel1 repeat HG564_RS00770 PF01709 Transcriptional regulator HG564_RS00775 PF00490 Delta-aminolevulinic acid dehydratase HG564_RS00785 PF00072 Response regulator receiver domain HG564_RS00785 PF00486 Transcriptional regulatory protein, C terminal HG564_RS00800 PF01136 Peptidase family U32 HG564_RS00810 PF03462 PCRF domain HG564_RS00810 PF00472 RF-1 domain HG564_RS00815 PF03454 MoeA C-terminal region (domain IV) HG564_RS00815 PF00994 Probable molybdopterin binding domain HG564_RS00815 PF03453 MoeA N-terminal region (domain I and II) HG564_RS00830 PF00639 PPIC-type PPIASE domain HG564_RS00835 PF01116 Fructose-bisphosphate aldolase class-II HG564_RS00840 PF01132 Elongation factor P (EF-P) OB domain HG564_RS00840 PF08207 Elongation factor P (EF-P) KOW-like domain HG564_RS00840 PF09285 Elongation factor P, C-terminal HG564_RS00845 PF03102 NeuB family HG564_RS00845 PF08666 SAF domain HG564_RS00850 PF00005 ABC transporter HG564_RS00855 PF00795 Carbon-nitrogen hydrolase HG564_RS00865 PF01336 OB-fold nucleic acid binding domain HG564_RS00865 PF00152 tRNA synthetases class II (D, K and N) HG564_RS00870 PF00464 Serine hydroxymethyltransferase HG564_RS00895 PF03350 Uncharacterized protein family, UPF0114 HG564_RS00900 PF13091 PLD-like domain HG564_RS00905 PF13183 4Fe-4S dicluster domain HG564_RS00905 PF13085 2Fe-2S iron-sulfur cluster binding domain HG564_RS00910 PF00890 FAD binding domain HG564_RS00910 PF02910 Fumarate reductase flavoprotein C-term HG564_RS00915 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HG564_RS00920 PF00121 Triosephosphate isomerase HG564_RS00930 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HG564_RS00930 PF00132 Bacterial transferase hexapeptide (six repeats) HG564_RS00935 PF00438 S-adenosylmethionine synthetase, N-terminal domain HG564_RS00935 PF02772 S-adenosylmethionine synthetase, central domain HG564_RS00935 PF02773 S-adenosylmethionine synthetase, C-terminal domain HG564_RS00940 PF00334 Nucleoside diphosphate kinase HG564_RS00950 PF01783 Ribosomal L32p protein family HG564_RS00955 PF02504 Fatty acid synthesis protein HG564_RS00960 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HG564_RS00960 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HG564_RS00980 PF10609 NUBPL iron-transfer P-loop NTPase HG564_RS00980 PF01883 Iron-sulfur cluster assembly protein HG564_RS01015 PF03135 CagE, TrbE, VirB family, component of type IV transporter system HG564_RS01020 PF01131 DNA topoisomerase HG564_RS01020 PF01751 Toprim domain HG564_RS01055 PF00437 Type II/IV secretion system protein HG564_RS01075 PF02534 Type IV secretory system Conjugative DNA transfer HG564_RS01080 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ HG564_RS01105 PF13614 AAA domain HG564_RS01140 PF00589 Phage integrase family HG564_RS01140 PF18644 Phage integrase SAM-like domain HG564_RS01145 PF00183 Hsp90 protein HG564_RS01150 PF08238 Sel1 repeat HG564_RS01150 PF13181 Tetratricopeptide repeat HG564_RS01155 PF07687 Peptidase dimerisation domain HG564_RS01155 PF01546 Peptidase family M20/M25/M40 HG564_RS01160 PF13932 GidA associated domain HG564_RS01160 PF01134 Glucose inhibited division protein A HG564_RS01165 PF00939 Sodium:sulfate symporter transmembrane region HG564_RS01175 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HG564_RS01175 PF13288 DXP reductoisomerase C-terminal domain HG564_RS01175 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HG564_RS01190 PF01161 Phosphatidylethanolamine-binding protein HG564_RS01200 PF00266 Aminotransferase class-V HG564_RS01205 PF01592 NifU-like N terminal domain HG564_RS01205 PF01106 NifU-like domain HG564_RS01205 PF04324 BFD-like [2Fe-2S] binding domain HG564_RS01215 PF18073 Rubredoxin metal binding domain HG564_RS01220 PF01625 Peptide methionine sulfoxide reductase HG564_RS01220 PF01641 SelR domain HG564_RS01225 PF01925 Sulfite exporter TauE/SafE HG564_RS01235 PF00916 Sulfate permease family HG564_RS01235 PF01740 STAS domain HG564_RS01250 PF02348 Cytidylyltransferase HG564_RS01265 PF03738 Glutathionylspermidine synthase preATP-grasp HG564_RS01275 PF13176 Tetratricopeptide repeat HG564_RS01275 PF13181 Tetratricopeptide repeat HG564_RS01275 PF08238 Sel1 repeat HG564_RS01285 PF03900 Porphobilinogen deaminase, C-terminal domain HG564_RS01285 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HG564_RS01290 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HG564_RS01290 PF04073 Aminoacyl-tRNA editing domain HG564_RS01290 PF03129 Anticodon binding domain HG564_RS01295 PF01488 Shikimate / quinate 5-dehydrogenase HG564_RS01295 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HG564_RS01295 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HG564_RS01300 PF00348 Polyprenyl synthetase HG564_RS01315 PF00210 Ferritin-like domain HG564_RS01320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HG564_RS01320 PF00512 His Kinase A (phospho-acceptor) domain HG564_RS01330 PF02119 Flagellar P-ring protein HG564_RS01335 PF00270 DEAD/DEAH box helicase HG564_RS01335 PF00271 Helicase conserved C-terminal domain HG564_RS01350 PF00005 ABC transporter HG564_RS01350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HG564_RS01355 PF12911 N-terminal TM domain of oligopeptide transport permease C HG564_RS01355 PF00528 Binding-protein-dependent transport system inner membrane component HG564_RS01375 PF00709 Adenylosuccinate synthetase HG564_RS01390 PF02163 Peptidase family M50 HG564_RS01395 PF02601 Exonuclease VII, large subunit HG564_RS01395 PF13742 OB-fold nucleic acid binding domain HG564_RS01400 PF18273 Type III R-M EcoP15I C-terminal domain HG564_RS01400 PF01555 DNA methylase HG564_RS01410 PF18643 BsaWI restriction endonuclease type 2 HG564_RS01420 PF02861 Clp amino terminal domain, pathogenicity island component HG564_RS01420 PF17871 AAA lid domain HG564_RS01420 PF10431 C-terminal, D2-small domain, of ClpB protein HG564_RS01420 PF00004 ATPase family associated with various cellular activities (AAA) HG564_RS01420 PF07724 AAA domain (Cdc48 subfamily) HG564_RS01425 PF02683 Cytochrome C biogenesis protein transmembrane region HG564_RS01430 PF01979 Amidohydrolase family HG564_RS01435 PF01979 Amidohydrolase family HG564_RS01445 PF00919 Uncharacterized protein family UPF0004 HG564_RS01445 PF04055 Radical SAM superfamily HG564_RS01470 PF03692 Putative zinc- or iron-chelating domain HG564_RS01480 PF00218 Indole-3-glycerol phosphate synthase HG564_RS01490 PF02541 Ppx/GppA phosphatase family HG564_RS01495 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HG564_RS01505 PF01702 Queuine tRNA-ribosyltransferase HG564_RS01515 PF01761 3-dehydroquinate synthase HG564_RS01525 PF00919 Uncharacterized protein family UPF0004 HG564_RS01525 PF04055 Radical SAM superfamily HG564_RS01530 PF00004 ATPase family associated with various cellular activities (AAA) HG564_RS01530 PF01434 Peptidase family M41 HG564_RS01530 PF17862 AAA+ lid domain HG564_RS01550 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HG564_RS01550 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HG564_RS01565 PF04715 Anthranilate synthase component I, N terminal region HG564_RS01565 PF00425 chorismate binding enzyme HG564_RS01570 PF00795 Carbon-nitrogen hydrolase HG564_RS01580 PF00829 Ribosomal prokaryotic L21 protein HG564_RS01585 PF01016 Ribosomal L27 protein HG564_RS01590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HG564_RS01595 PF00528 Binding-protein-dependent transport system inner membrane component HG564_RS01600 PF00528 Binding-protein-dependent transport system inner membrane component HG564_RS01600 PF12911 N-terminal TM domain of oligopeptide transport permease C HG564_RS01605 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HG564_RS01605 PF00005 ABC transporter HG564_RS01610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HG564_RS01610 PF00005 ABC transporter HG564_RS01615 PF01926 50S ribosome-binding GTPase HG564_RS01615 PF01018 GTP1/OBG HG564_RS01630 PF00202 Aminotransferase class-III HG564_RS01645 PF00795 Carbon-nitrogen hydrolase HG564_RS01650 PF01522 Polysaccharide deacetylase HG564_RS01660 PF01555 DNA methylase HG564_RS01670 PF02492 CobW/HypB/UreG, nucleotide-binding domain HG564_RS01670 PF07683 Cobalamin synthesis protein cobW C-terminal domain HG564_RS01680 PF10615 Protein of unknown function (DUF2470) HG564_RS01680 PF01243 Pyridoxamine 5'-phosphate oxidase HG564_RS01685 PF03485 Arginyl tRNA synthetase N terminal domain HG564_RS01685 PF05746 DALR anticodon binding domain HG564_RS01685 PF00750 tRNA synthetases class I (R) HG564_RS01690 PF02416 mttA/Hcf106 family HG564_RS01695 PF00625 Guanylate kinase HG564_RS01715 PF02107 Flagellar L-ring protein HG564_RS01720 PF02348 Cytidylyltransferase HG564_RS01725 PF02348 Cytidylyltransferase HG564_RS01735 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HG564_RS01740 PF02540 NAD synthase HG564_RS01750 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HG564_RS01750 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HG564_RS01755 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HG564_RS01760 PF03776 Septum formation topological specificity factor MinE HG564_RS01765 PF17782 DprA winged helix domain HG564_RS01765 PF02481 DNA recombination-mediator protein A HG564_RS01770 PF03652 Holliday junction resolvase HG564_RS01810 PF00849 RNA pseudouridylate synthase HG564_RS01815 PF10141 Single-strand DNA-specific exonuclease, C terminal domain HG564_RS01815 PF01368 DHH family HG564_RS01815 PF02272 DHHA1 domain HG564_RS01815 PF17768 RecJ OB domain HG564_RS01820 PF00117 Glutamine amidotransferase class-I HG564_RS01820 PF06418 CTP synthase N-terminus HG564_RS01830 PF08345 Flagellar M-ring protein C-terminal HG564_RS01830 PF01514 Secretory protein of YscJ/FliF family HG564_RS01835 PF14842 FliG N-terminal domain HG564_RS01835 PF14841 FliG middle domain HG564_RS01835 PF01706 FliG C-terminal domain HG564_RS01845 PF02779 Transketolase, pyrimidine binding domain HG564_RS01845 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HG564_RS01845 PF02780 Transketolase, C-terminal domain HG564_RS01850 PF06421 GTP-binding protein LepA C-terminus HG564_RS01850 PF03144 Elongation factor Tu domain 2 HG564_RS01850 PF00009 Elongation factor Tu GTP binding domain HG564_RS01850 PF00679 Elongation factor G C-terminus HG564_RS01855 PF00145 C-5 cytosine-specific DNA methylase HG564_RS01865 PF00460 Flagella basal body rod protein HG564_RS01865 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HG564_RS01870 PF00083 Sugar (and other) transporter HG564_RS01875 PF01580 FtsK/SpoIIIE family HG564_RS01875 PF09397 Ftsk gamma domain HG564_RS01875 PF17854 FtsK alpha domain HG564_RS01885 PF02780 Transketolase, C-terminal domain HG564_RS01885 PF00456 Transketolase, thiamine diphosphate binding domain HG564_RS01885 PF02779 Transketolase, pyrimidine binding domain HG564_RS01890 PF06574 FAD synthetase HG564_RS01890 PF01687 Riboflavin kinase HG564_RS01895 PF00163 Ribosomal protein S4/S9 N-terminal domain HG564_RS01895 PF01479 S4 domain HG564_RS01905 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HG564_RS01905 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HG564_RS01915 PF00005 ABC transporter HG564_RS01915 PF00664 ABC transporter transmembrane region HG564_RS01930 PF03824 High-affinity nickel-transport protein HG564_RS01950 PF00403 Heavy-metal-associated domain HG564_RS01955 PF00403 Heavy-metal-associated domain HG564_RS01960 PF01066 CDP-alcohol phosphatidyltransferase HG564_RS01970 PF01434 Peptidase family M41 HG564_RS01970 PF17862 AAA+ lid domain HG564_RS01970 PF00004 ATPase family associated with various cellular activities (AAA) HG564_RS01980 PF00072 Response regulator receiver domain HG564_RS02005 PF02527 rRNA small subunit methyltransferase G HG564_RS02010 PF02547 Queuosine biosynthesis protein HG564_RS02015 PF00902 Sec-independent protein translocase protein (TatC) HG564_RS02030 PF00145 C-5 cytosine-specific DNA methylase HG564_RS02035 PF05491 RuvB C-terminal winged helix domain HG564_RS02035 PF05496 Holliday junction DNA helicase RuvB P-loop domain HG564_RS02035 PF17864 RuvB AAA lid domain HG564_RS02040 PF02548 Ketopantoate hydroxymethyltransferase HG564_RS02065 PF03775 Septum formation inhibitor MinC, C-terminal domain HG564_RS02070 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HG564_RS02080 PF00288 GHMP kinases N terminal domain HG564_RS02090 PF11987 Translation-initiation factor 2 HG564_RS02090 PF00009 Elongation factor Tu GTP binding domain HG564_RS02090 PF04760 Translation initiation factor IF-2, N-terminal region HG564_RS02095 PF02033 Ribosome-binding factor A HG564_RS02100 PF17384 RimP C-terminal SH3 domain HG564_RS02100 PF02576 RimP N-terminal domain HG564_RS02105 PF13193 AMP-binding enzyme C-terminal domain HG564_RS02105 PF16177 Acetyl-coenzyme A synthetase N-terminus HG564_RS02105 PF00501 AMP-binding enzyme HG564_RS02110 PF00149 Calcineurin-like phosphoesterase HG564_RS02115 PF00072 Response regulator receiver domain HG564_RS02115 PF00486 Transcriptional regulatory protein, C terminal HG564_RS02125 PF00771 FHIPEP family HG564_RS02130 PF00312 Ribosomal protein S15 HG564_RS02140 PF01220 Dehydroquinase class II HG564_RS02145 PF00557 Metallopeptidase family M24 HG564_RS02145 PF01321 Creatinase/Prolidase N-terminal domain HG564_RS02150 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HG564_RS02155 PF00448 SRP54-type protein, GTPase domain HG564_RS02160 PF10609 NUBPL iron-transfer P-loop NTPase HG564_RS02170 PF04539 Sigma-70 region 3 HG564_RS02170 PF04542 Sigma-70 region 2 HG564_RS02170 PF04545 Sigma-70, region 4 HG564_RS02175 PF02154 Flagellar motor switch protein FliM HG564_RS02175 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HG564_RS02180 PF04509 CheC-like family HG564_RS02180 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HG564_RS02195 PF01475 Ferric uptake regulator family HG564_RS02200 PF05496 Holliday junction DNA helicase RuvB P-loop domain HG564_RS02200 PF12002 MgsA AAA+ ATPase C terminal HG564_RS02200 PF16193 AAA C-terminal domain HG564_RS02200 PF01661 Macro domain HG564_RS02205 PF13411 MerR HTH family regulatory protein HG564_RS02210 PF00226 DnaJ domain HG564_RS02210 PF01556 DnaJ C terminal domain HG564_RS02220 PF01612 3'-5' exonuclease HG564_RS02220 PF01367 5'-3' exonuclease, C-terminal SAM fold HG564_RS02220 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HG564_RS02220 PF00476 DNA polymerase family A HG564_RS02225 PF00072 Response regulator receiver domain HG564_RS02225 PF00486 Transcriptional regulatory protein, C terminal HG564_RS02230 PF02542 YgbB family HG564_RS02230 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HG564_RS02235 PF17820 PDZ domain HG564_RS02235 PF13180 PDZ domain HG564_RS02240 PF00324 Amino acid permease HG564_RS02245 PF01066 CDP-alcohol phosphatidyltransferase HG564_RS02260 PF00701 Dihydrodipicolinate synthetase family HG564_RS02270 PF01180 Dihydroorotate dehydrogenase HG564_RS02275 PF02503 Polyphosphate kinase middle domain HG564_RS02275 PF13089 Polyphosphate kinase N-terminal domain HG564_RS02275 PF17941 Polyphosphate kinase C-terminal domain 1 HG564_RS02275 PF13090 Polyphosphate kinase C-terminal domain 2 HG564_RS02290 PF02384 N-6 DNA Methylase HG564_RS02290 PF12161 HsdM N-terminal domain HG564_RS02295 PF12008 Type I restriction and modification enzyme - subunit R C terminal HG564_RS02295 PF18766 SWI2/SNF2 ATPase HG564_RS02295 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HG564_RS02300 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HG564_RS02300 PF11867 Domain of unknown function (DUF3387) HG564_RS02300 PF18766 SWI2/SNF2 ATPase HG564_RS02340 PF07282 Putative transposase DNA-binding domain HG564_RS02340 PF01385 Probable transposase HG564_RS02340 PF12323 Helix-turn-helix domain HG564_RS02365 PF00528 Binding-protein-dependent transport system inner membrane component HG564_RS02370 PF00005 ABC transporter HG564_RS02370 PF08402 TOBE domain HG564_RS02375 PF00749 tRNA synthetases class I (E and Q), catalytic domain HG564_RS02385 PF02384 N-6 DNA Methylase HG564_RS02395 PF00009 Elongation factor Tu GTP binding domain HG564_RS02395 PF00679 Elongation factor G C-terminus HG564_RS02395 PF03144 Elongation factor Tu domain 2 HG564_RS02410 PF00145 C-5 cytosine-specific DNA methylase HG564_RS02445 PF00830 Ribosomal L28 family HG564_RS02455 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HG564_RS02455 PF00953 Glycosyl transferase family 4 HG564_RS02460 PF08245 Mur ligase middle domain HG564_RS02460 PF02875 Mur ligase family, glutamate ligase domain HG564_RS02465 PF04359 Protein of unknown function (DUF493) HG564_RS02470 PF03061 Thioesterase superfamily HG564_RS02475 PF00209 Sodium:neurotransmitter symporter family HG564_RS02480 PF00209 Sodium:neurotransmitter symporter family HG564_RS02485 PF02253 Phospholipase A1 HG564_RS02490 PF00712 DNA polymerase III beta subunit, N-terminal domain HG564_RS02490 PF02768 DNA polymerase III beta subunit, C-terminal domain HG564_RS02490 PF02767 DNA polymerase III beta subunit, central domain HG564_RS02495 PF01751 Toprim domain HG564_RS02495 PF00986 DNA gyrase B subunit, carboxyl terminus HG564_RS02495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HG564_RS02495 PF00204 DNA gyrase B HG564_RS02510 PF10145 Phage-related minor tail protein HG564_RS02510 PF01551 Peptidase family M23 HG564_RS02510 PF01464 Transglycosylase SLT domain HG564_RS02520 PF15437 Plasminogen-binding protein pgbA C-terminal HG564_RS02520 PF15436 Plasminogen-binding protein pgbA N-terminal HG564_RS02525 PF01565 FAD binding domain HG564_RS02525 PF02913 FAD linked oxidases, C-terminal domain HG564_RS02530 PF01113 Dihydrodipicolinate reductase, N-terminus HG564_RS02530 PF05173 Dihydrodipicolinate reductase, C-terminus HG564_RS02540 PF03951 Glutamine synthetase, beta-Grasp domain HG564_RS02540 PF00120 Glutamine synthetase, catalytic domain HG564_RS02550 PF01281 Ribosomal protein L9, N-terminal domain HG564_RS02550 PF03948 Ribosomal protein L9, C-terminal domain HG564_RS02555 PF00227 Proteasome subunit HG564_RS02560 PF10431 C-terminal, D2-small domain, of ClpB protein HG564_RS02560 PF07724 AAA domain (Cdc48 subfamily) HG564_RS02565 PF07650 KH domain HG564_RS02565 PF01926 50S ribosome-binding GTPase HG564_RS02595 PF02534 Type IV secretory system Conjugative DNA transfer HG564_RS02600 PF00437 Type II/IV secretion system protein HG564_RS02610 PF03743 Bacterial conjugation TrbI-like protein HG564_RS02635 PF13117 Cag pathogenicity island protein Cag12 HG564_RS02640 PF16707 Cag pathogenicity island protein S of Helicobacter pylori HG564_RS02695 PF03135 CagE, TrbE, VirB family, component of type IV transporter system HG564_RS02715 PF03507 CagA exotoxin HG564_RS02725 PF01177 Asp/Glu/Hydantoin racemase HG564_RS02730 PF07497 Rho termination factor, RNA-binding domain HG564_RS02730 PF07498 Rho termination factor, N-terminal domain HG564_RS02730 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HG564_RS02735 PF01197 Ribosomal protein L31 HG564_RS02740 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HG564_RS02745 PF08032 RNA 2'-O ribose methyltransferase substrate binding HG564_RS02745 PF00588 SpoU rRNA Methylase family HG564_RS02765 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HG564_RS02770 PF02801 Beta-ketoacyl synthase, C-terminal domain HG564_RS02770 PF00109 Beta-ketoacyl synthase, N-terminal domain HG564_RS02775 PF00550 Phosphopantetheine attachment site HG564_RS02785 PF01165 Ribosomal protein S21 HG564_RS02800 PF04224 Protein of unknown function, DUF417 HG564_RS02805 PF01678 Diaminopimelate epimerase HG564_RS02810 PF01594 AI-2E family transporter HG564_RS02820 PF06071 Protein of unknown function (DUF933) HG564_RS02820 PF01926 50S ribosome-binding GTPase HG564_RS02825 PF00883 Cytosol aminopeptidase family, catalytic domain HG564_RS02825 PF02789 Cytosol aminopeptidase family, N-terminal domain HG564_RS02835 PF00156 Phosphoribosyl transferase domain HG564_RS02845 PF02502 Ribose/Galactose Isomerase HG564_RS02850 PF02163 Peptidase family M50 HG564_RS02855 PF10502 Signal peptidase, peptidase S26 HG564_RS02860 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HG564_RS02860 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HG564_RS02895 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HG564_RS02895 PF04509 CheC-like family HG564_RS02900 PF00633 Helix-hairpin-helix motif HG564_RS02900 PF00730 HhH-GPD superfamily base excision DNA repair protein HG564_RS02905 PF04023 FeoA domain HG564_RS02925 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HG564_RS02925 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HG564_RS02925 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HG564_RS02930 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HG564_RS02965 PF00912 Transglycosylase HG564_RS02965 PF00905 Penicillin binding protein transpeptidase domain HG564_RS02970 PF00155 Aminotransferase class I and II HG564_RS02975 PF08447 PAS fold HG564_RS02975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HG564_RS02975 PF13426 PAS domain HG564_RS02985 PF00700 Bacterial flagellin C-terminal helical region HG564_RS02985 PF07196 Flagellin hook IN motif HG564_RS02985 PF00669 Bacterial flagellin N-terminal helical region HG564_RS03000 PF01208 Uroporphyrinogen decarboxylase (URO-D) HG564_RS03015 PF00873 AcrB/AcrD/AcrF family HG564_RS03025 PF08502 LeuA allosteric (dimerisation) domain HG564_RS03025 PF00682 HMGL-like HG564_RS03035 PF00005 ABC transporter HG564_RS03035 PF03459 TOBE domain HG564_RS03045 PF03120 NAD-dependent DNA ligase OB-fold domain HG564_RS03045 PF00533 BRCA1 C Terminus (BRCT) domain HG564_RS03045 PF01653 NAD-dependent DNA ligase adenylation domain HG564_RS03050 PF01584 CheW-like domain HG564_RS03050 PF00072 Response regulator receiver domain HG564_RS03055 PF02938 GAD domain HG564_RS03055 PF01336 OB-fold nucleic acid binding domain HG564_RS03055 PF00152 tRNA synthetases class II (D, K and N) HG564_RS03065 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) HG564_RS03075 PF00719 Inorganic pyrophosphatase HG564_RS03080 PF00488 MutS domain V HG564_RS03080 PF01713 Smr domain HG564_RS03090 PF08245 Mur ligase middle domain HG564_RS03090 PF02875 Mur ligase family, glutamate ligase domain HG564_RS03090 PF01225 Mur ligase family, catalytic domain HG564_RS03095 PF00155 Aminotransferase class I and II HG564_RS03100 PF04551 GcpE protein HG564_RS03105 PF14602 Hexapeptide repeat of succinyl-transferase HG564_RS03105 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle HG564_RS03120 PF02525 Flavodoxin-like fold HG564_RS03125 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal HG564_RS03125 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HG564_RS03125 PF10518 TAT (twin-arginine translocation) pathway signal sequence HG564_RS03130 PF00374 Nickel-dependent hydrogenase HG564_RS03135 PF01292 Prokaryotic cytochrome b561 HG564_RS03140 PF01750 Hydrogenase maturation protease HG564_RS03165 PF06508 Queuosine biosynthesis protein QueC HG564_RS03170 PF12627 Probable RNA and SrmB- binding site of polymerase A HG564_RS03170 PF01743 Poly A polymerase head domain HG564_RS03170 PF13735 tRNA nucleotidyltransferase domain 2 putative HG564_RS03175 PF00881 Nitroreductase family HG564_RS03180 PF00749 tRNA synthetases class I (E and Q), catalytic domain HG564_RS03185 PF02325 YGGT family HG564_RS03190 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain HG564_RS03190 PF01464 Transglycosylase SLT domain HG564_RS03195 PF00483 Nucleotidyl transferase HG564_RS03205 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HG564_RS03210 PF10415 Fumarase C C-terminus HG564_RS03210 PF00206 Lyase HG564_RS03230 PF00210 Ferritin-like domain HG564_RS03235 PF04055 Radical SAM superfamily HG564_RS03240 PF01103 Surface antigen HG564_RS03240 PF07244 Surface antigen variable number repeat HG564_RS03245 PF04055 Radical SAM superfamily HG564_RS03255 PF02637 GatB domain HG564_RS03255 PF02934 GatB/GatE catalytic domain HG564_RS03270 PF00075 RNase H HG564_RS03275 PF14622 Ribonuclease-III-like HG564_RS03275 PF00035 Double-stranded RNA binding motif HG564_RS03280 PF01264 Chorismate synthase HG564_RS03285 PF10788 Protein of unknown function (DUF2603) HG564_RS03290 PF06969 HemN C-terminal domain HG564_RS03290 PF04055 Radical SAM superfamily HG564_RS03295 PF02754 Cysteine-rich domain HG564_RS03315 PF00155 Aminotransferase class I and II HG564_RS03320 PF18644 Phage integrase SAM-like domain HG564_RS03320 PF00589 Phage integrase family HG564_RS03325 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HG564_RS03325 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HG564_RS03330 PF01925 Sulfite exporter TauE/SafE HG564_RS03335 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HG564_RS03335 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HG564_RS03340 PF03477 ATP cone domain HG564_RS03340 PF00317 Ribonucleotide reductase, all-alpha domain HG564_RS03340 PF02867 Ribonucleotide reductase, barrel domain HG564_RS03355 PF12804 MobA-like NTP transferase domain HG564_RS03355 PF14602 Hexapeptide repeat of succinyl-transferase HG564_RS03360 PF00813 FliP family HG564_RS03385 PF01555 DNA methylase HG564_RS03400 PF02803 Thiolase, C-terminal domain HG564_RS03400 PF00108 Thiolase, N-terminal domain HG564_RS03405 PF01144 Coenzyme A transferase HG564_RS03410 PF01144 Coenzyme A transferase HG564_RS03415 PF02667 Short chain fatty acid transporter HG564_RS03425 PF01968 Hydantoinase/oxoprolinase HG564_RS03425 PF05378 Hydantoinase/oxoprolinase N-terminal region HG564_RS03430 PF02538 Hydantoinase B/oxoprolinase HG564_RS03435 PF08882 Acetone carboxylase gamma subunit HG564_RS03445 PF01219 Prokaryotic diacylglycerol kinase HG564_RS03450 PF03989 DNA gyrase C-terminal domain, beta-propeller HG564_RS03450 PF00521 DNA gyrase/topoisomerase IV, subunit A HG564_RS03460 PF00158 Sigma-54 interaction domain HG564_RS03460 PF00072 Response regulator receiver domain HG564_RS03470 PF17755 UvrA DNA-binding domain HG564_RS03470 PF17760 UvrA interaction domain HG564_RS03480 PF01795 MraW methylase family HG564_RS03490 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase HG564_RS03510 PF04552 Sigma-54, DNA binding domain HG564_RS03510 PF04963 Sigma-54 factor, core binding domain HG564_RS03510 PF00309 Sigma-54 factor, Activator interacting domain (AID) HG564_RS03515 PF00005 ABC transporter HG564_RS03515 PF12399 Branched-chain amino acid ATP-binding cassette transporter HG564_RS03525 PF12170 DNA polymerase III tau subunit V interacting with alpha HG564_RS03525 PF12169 DNA polymerase III subunits gamma and tau domain III HG564_RS03530 PF01810 LysE type translocator HG564_RS03550 PF17763 Glutaminase/Asparaginase C-terminal domain HG564_RS03550 PF00710 Asparaginase, N-terminal HG564_RS03555 PF03605 Anaerobic c4-dicarboxylate membrane transporter HG564_RS03570 PF01207 Dihydrouridine synthase (Dus) HG564_RS03575 PF01171 PP-loop family HG564_RS03600 PF04055 Radical SAM superfamily HG564_RS03600 PF00919 Uncharacterized protein family UPF0004 HG564_RS03605 PF00156 Phosphoribosyl transferase domain HG564_RS03610 PF00266 Aminotransferase class-V HG564_RS03615 PF04608 Phosphatidylglycerophosphatase A HG564_RS03620 PF01820 D-ala D-ala ligase N-terminus HG564_RS03620 PF07478 D-ala D-ala ligase C-terminus HG564_RS03630 PF08245 Mur ligase middle domain HG564_RS03630 PF01225 Mur ligase family, catalytic domain HG564_RS03630 PF02875 Mur ligase family, glutamate ligase domain HG564_RS03635 PF01230 HIT domain HG564_RS03640 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HG564_RS03640 PF14572 Phosphoribosyl synthetase-associated domain HG564_RS03650 PF01098 Cell cycle protein HG564_RS03660 PF03193 RsgA GTPase HG564_RS03665 PF01479 S4 domain HG564_RS03665 PF00849 RNA pseudouridylate synthase HG564_RS03675 PF02390 Putative methyltransferase HG564_RS03680 PF00005 ABC transporter HG564_RS03700 PF07195 Flagellar hook-associated protein 2 C-terminus HG564_RS03700 PF02465 Flagellar hook-associated protein 2 N-terminus HG564_RS03705 PF02561 Flagellar protein FliS HG564_RS03715 PF00899 ThiF family HG564_RS03715 PF00581 Rhodanese-like domain HG564_RS03725 PF00795 Carbon-nitrogen hydrolase HG564_RS03730 PF13726 Na+-H+ antiporter family HG564_RS03730 PF03553 Na+/H+ antiporter family HG564_RS03735 PF01554 MatE HG564_RS03740 PF00013 KH domain HG564_RS03740 PF12072 Domain of unknown function (DUF3552) HG564_RS03740 PF01966 HD domain HG564_RS03755 PF00448 SRP54-type protein, GTPase domain HG564_RS03770 PF04055 Radical SAM superfamily HG564_RS03770 PF06463 Molybdenum Cofactor Synthesis C HG564_RS03775 PF12804 MobA-like NTP transferase domain HG564_RS03780 PF01312 FlhB HrpN YscU SpaS Family HG564_RS03790 PF01520 N-acetylmuramoyl-L-alanine amidase HG564_RS03795 PF00162 Phosphoglycerate kinase HG564_RS03800 PF00579 tRNA synthetases class I (W and Y) HG564_RS03800 PF01479 S4 domain HG564_RS03805 PF02824 TGS domain HG564_RS03805 PF04607 Region found in RelA / SpoT proteins HG564_RS03805 PF13291 ACT domain HG564_RS03810 PF01192 RNA polymerase Rpb6 HG564_RS03815 PF00696 Amino acid kinase family HG564_RS03825 PF11791 Aconitate B N-terminal domain HG564_RS03825 PF06434 Aconitate hydratase 2 N-terminus HG564_RS03825 PF00330 Aconitase family (aconitate hydratase) HG564_RS03855 PF03548 Outer membrane lipoprotein carrier protein LolA HG564_RS03860 PF02810 SEC-C motif HG564_RS03860 PF07516 SecA Wing and Scaffold domain HG564_RS03860 PF01043 SecA preprotein cross-linking domain HG564_RS03860 PF07517 SecA DEAD-like domain HG564_RS03875 PF01420 Type I restriction modification DNA specificity domain HG564_RS03880 PF00403 Heavy-metal-associated domain HG564_RS03885 PF01078 Magnesium chelatase, subunit ChlI HG564_RS03885 PF13335 Magnesium chelatase, subunit ChlI C-terminal HG564_RS03890 PF01327 Polypeptide deformylase HG564_RS03895 PF00574 Clp protease HG564_RS03900 PF05698 Bacterial trigger factor protein (TF) C-terminus HG564_RS03900 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HG564_RS03900 PF05697 Bacterial trigger factor protein (TF) HG564_RS03910 PF05211 Neuraminyllactose-binding hemagglutinin precursor (NLBH) HG564_RS03915 PF01967 MoaC family HG564_RS03920 PF00994 Probable molybdopterin binding domain HG564_RS03925 PF02391 MoaE protein HG564_RS03935 PF00925 GTP cyclohydrolase II HG564_RS03945 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HG564_RS03945 PF00925 GTP cyclohydrolase II HG564_RS03965 PF01648 4'-phosphopantetheinyl transferase superfamily HG564_RS03970 PF03748 Flagellar basal body-associated protein FliL HG564_RS03990 PF00753 Metallo-beta-lactamase superfamily HG564_RS03995 PF00899 ThiF family HG564_RS04000 PF01618 MotA/TolQ/ExbB proton channel family HG564_RS04005 PF13677 Membrane MotB of proton-channel complex MotA/MotB HG564_RS04005 PF00691 OmpA family HG564_RS04015 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HG564_RS04020 PF00005 ABC transporter HG564_RS04020 PF00571 CBS domain HG564_RS04035 PF08459 UvrC Helix-hairpin-helix N-terminal HG564_RS04035 PF02151 UvrB/uvrC motif HG564_RS04035 PF01541 GIY-YIG catalytic domain HG564_RS04040 PF03447 Homoserine dehydrogenase, NAD binding domain HG564_RS04040 PF01842 ACT domain HG564_RS04040 PF00742 Homoserine dehydrogenase HG564_RS04045 PF02021 Uncharacterised protein family UPF0102 HG564_RS04050 PF00085 Thioredoxin HG564_RS04055 PF07992 Pyridine nucleotide-disulphide oxidoreductase HG564_RS04065 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HG564_RS04070 PF00119 ATP synthase A chain HG564_RS04075 PF00478 IMP dehydrogenase / GMP reductase domain HG564_RS04075 PF00571 CBS domain HG564_RS04080 PF01425 Amidase HG564_RS04085 PF01121 Dephospho-CoA kinase HG564_RS04090 PF17284 Spermidine synthase tetramerisation domain HG564_RS04100 PF01926 50S ribosome-binding GTPase HG564_RS04100 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HG564_RS04105 PF00216 Bacterial DNA-binding protein HG564_RS04130 PF02719 Polysaccharide biosynthesis protein HG564_RS04135 PF02441 Flavoprotein HG564_RS04135 PF04127 DNA / pantothenate metabolism flavoprotein HG564_RS04145 PF06002 Alpha-2,3-sialyltransferase (CST-I) HG564_RS04150 PF06002 Alpha-2,3-sialyltransferase (CST-I) HG564_RS04155 PF02348 Cytidylyltransferase HG564_RS04160 PF02350 UDP-N-acetylglucosamine 2-epimerase HG564_RS04165 PF08666 SAF domain HG564_RS04165 PF03102 NeuB family HG564_RS04170 PF18766 SWI2/SNF2 ATPase HG564_RS04170 PF12008 Type I restriction and modification enzyme - subunit R C terminal HG564_RS04170 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HG564_RS04175 PF01420 Type I restriction modification DNA specificity domain HG564_RS04180 PF12161 HsdM N-terminal domain HG564_RS04180 PF02384 N-6 DNA Methylase HG564_RS04185 PF00145 C-5 cytosine-specific DNA methylase HG564_RS04190 PF09556 HaeIII restriction endonuclease HG564_RS04195 PF01569 PAP2 superfamily HG564_RS04205 PF00005 ABC transporter HG564_RS04205 PF12848 ABC transporter HG564_RS04210 PF00478 IMP dehydrogenase / GMP reductase domain HG564_RS04215 PF13580 SIS domain HG564_RS04220 PF00294 pfkB family carbohydrate kinase HG564_RS04220 PF01467 Cytidylyltransferase-like HG564_RS04225 PF01370 NAD dependent epimerase/dehydratase family HG564_RS04240 PF03309 Type III pantothenate kinase HG564_RS04245 PF15437 Plasminogen-binding protein pgbA C-terminal HG564_RS04255 PF00692 dUTPase HG564_RS04260 PF03449 Transcription elongation factor, N-terminal HG564_RS04260 PF01272 Transcription elongation factor, GreA/GreB, C-term HG564_RS04265 PF02684 Lipid-A-disaccharide synthetase HG564_RS04275 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA HG564_RS04280 PF07559 Flagellar basal body protein FlaE HG564_RS04280 PF07196 Flagellin hook IN motif HG564_RS04280 PF00460 Flagella basal body rod protein HG564_RS04280 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HG564_RS04285 PF02611 CDP-diacylglycerol pyrophosphatase HG564_RS04290 PF03831 PhnA domain HG564_RS04290 PF08274 PhnA Zinc-Ribbon HG564_RS04305 PF00199 Catalase HG564_RS04305 PF06628 Catalase-related immune-responsive HG564_RS04310 PF07715 TonB-dependent Receptor Plug Domain HG564_RS04310 PF00593 TonB dependent receptor HG564_RS04315 PF02075 Crossover junction endodeoxyribonuclease RuvC HG564_RS04335 PF07499 RuvA, C-terminal domain HG564_RS04335 PF01330 RuvA N terminal domain HG564_RS04345 PF03023 Lipid II flippase MurJ HG564_RS04350 PF01406 tRNA synthetases class I (C) catalytic domain HG564_RS04350 PF09190 DALR domain HG564_RS04355 PF02691 Vacuolating cyotoxin HG564_RS04360 PF00005 ABC transporter HG564_RS04365 PF01032 FecCD transport family HG564_RS04370 PF00106 short chain dehydrogenase HG564_RS04375 PF03061 Thioesterase superfamily HG564_RS04380 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ HG564_RS04410 PF01924 Hydrogenase formation hypA family HG564_RS04415 PF01455 HupF/HypC family HG564_RS04420 PF02492 CobW/HypB/UreG, nucleotide-binding domain HG564_RS04430 PF01515 Phosphate acetyl/butaryl transferase HG564_RS04440 PF13861 FlgD Tudor-like domain HG564_RS04440 PF03963 Flagellar hook capping protein - N-terminal region HG564_RS04440 PF13860 FlgD Ig-like domain HG564_RS04445 PF07559 Flagellar basal body protein FlaE HG564_RS04445 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HG564_RS04445 PF00460 Flagella basal body rod protein HG564_RS04445 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HG564_RS04445 PF00460 Flagella basal body rod protein HG564_RS04445 PF07559 Flagellar basal body protein FlaE HG564_RS04455 PF13361 UvrD-like helicase C-terminal domain HG564_RS04455 PF00580 UvrD/REP helicase N-terminal domain HG564_RS04485 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HG564_RS04485 PF02142 MGS-like domain HG564_RS04485 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HG564_RS04490 PF01027 Inhibitor of apoptosis-promoting Bax1 HG564_RS04495 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HG564_RS04495 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HG564_RS04505 PF03797 Autotransporter beta-domain HG564_RS04505 PF02691 Vacuolating cyotoxin HG564_RS04515 PF01361 Tautomerase enzyme HG564_RS04520 PF02132 RecR protein HG564_RS04525 PF01142 tRNA pseudouridine synthase D (TruD) HG564_RS04530 PF01435 Peptidase family M48 HG564_RS04535 PF01227 GTP cyclohydrolase I HG564_RS04540 PF00348 Polyprenyl synthetase HG564_RS04545 PF01975 Survival protein SurE HG564_RS04555 PF01242 6-pyruvoyl tetrahydropterin synthase HG564_RS04575 PF07690 Major Facilitator Superfamily HG564_RS04590 PF00528 Binding-protein-dependent transport system inner membrane component HG564_RS04595 PF00497 Bacterial extracellular solute-binding proteins, family 3 HG564_RS04600 PF01168 Alanine racemase, N-terminal domain HG564_RS04600 PF00842 Alanine racemase, C-terminal domain HG564_RS04605 PF01235 Sodium:alanine symporter family HG564_RS04610 PF01266 FAD dependent oxidoreductase HG564_RS04615 PF01042 Endoribonuclease L-PSP HG564_RS04625 PF13146 TRL-like protein family HG564_RS04645 PF03553 Na+/H+ antiporter family HG564_RS04660 PF02590 Predicted SPOUT methyltransferase HG564_RS04665 PF01039 Carboxyl transferase domain HG564_RS04665 PF17848 Acetyl-coA carboxylase zinc finger domain HG564_RS04675 PF00994 Probable molybdopterin binding domain HG564_RS04675 PF18146 Damage-inducible protein CinA KH domain HG564_RS04675 PF02464 Competence-damaged protein HG564_RS04685 PF00881 Nitroreductase family HG564_RS04690 PF01790 Prolipoprotein diacylglyceryl transferase HG564_RS04695 PF00849 RNA pseudouridylate synthase HG564_RS04700 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HG564_RS04700 PF02390 Putative methyltransferase HG564_RS04710 PF01784 NIF3 (NGG1p interacting factor 3) HG564_RS04715 PF02091 Glycyl-tRNA synthetase alpha subunit HG564_RS04720 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HG564_RS04720 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HG564_RS04750 PF09827 CRISPR associated protein Cas2 HG564_RS04760 PF00873 AcrB/AcrD/AcrF family HG564_RS04775 PF02092 Glycyl-tRNA synthetase beta subunit HG564_RS04785 PF01676 Metalloenzyme superfamily HG564_RS04785 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HG564_RS04790 PF02686 Glu-tRNAGln amidotransferase C subunit HG564_RS04795 PF00202 Aminotransferase class-III HG564_RS04805 PF02491 SHS2 domain inserted in FTSA HG564_RS04810 PF12327 FtsZ family, C-terminal domain HG564_RS04810 PF00091 Tubulin/FtsZ family, GTPase domain HG564_RS04820 PF12323 Helix-turn-helix domain HG564_RS04820 PF01385 Probable transposase HG564_RS04820 PF07282 Putative transposase DNA-binding domain HG564_RS04835 PF00924 Mechanosensitive ion channel HG564_RS04845 PF13742 OB-fold nucleic acid binding domain HG564_RS04845 PF02601 Exonuclease VII, large subunit HG564_RS04915 PF17944 Arginine decarboxylase C-terminal helical extension HG564_RS04915 PF17810 Arginine decarboxylase helical bundle domain HG564_RS04915 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HG564_RS04930 PF08003 Protein of unknown function (DUF1698) HG564_RS04940 PF01588 Putative tRNA binding domain HG564_RS04940 PF09334 tRNA synthetases class I (M) HG564_RS04940 PF00133 tRNA synthetases class I (I, L, M and V) HG564_RS04950 PF00924 Mechanosensitive ion channel HG564_RS04980 PF00117 Glutamine amidotransferase class-I HG564_RS04980 PF02540 NAD synthase HG564_RS04980 PF00958 GMP synthase C terminal domain HG564_RS04990 PF01568 Molydopterin dinucleotide binding domain HG564_RS04990 PF18364 Molybdopterin oxidoreductase N-terminal domain HG564_RS04990 PF00384 Molybdopterin oxidoreductase HG564_RS05000 PF02347 Glycine cleavage system P-protein HG564_RS05005 PF01230 HIT domain HG564_RS05010 PF01409 tRNA synthetases class II core domain (F) HG564_RS05010 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HG564_RS05015 PF03484 tRNA synthetase B5 domain HG564_RS05015 PF03147 Ferredoxin-fold anticodon binding domain HG564_RS05015 PF01588 Putative tRNA binding domain HG564_RS05015 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HG564_RS05020 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HG564_RS05025 PF02401 LytB protein HG564_RS05030 PF00575 S1 RNA binding domain HG564_RS05040 PF01842 ACT domain HG564_RS05040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HG564_RS05040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HG564_RS05045 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HG564_RS05050 PF01168 Alanine racemase, N-terminal domain HG564_RS05060 PF01584 CheW-like domain HG564_RS05060 PF00072 Response regulator receiver domain HG564_RS05065 PF01627 Hpt domain HG564_RS05065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HG564_RS05065 PF02895 Signal transducing histidine kinase, homodimeric domain HG564_RS05065 PF00072 Response regulator receiver domain HG564_RS05065 PF01584 CheW-like domain HG564_RS05070 PF01584 CheW-like domain HG564_RS05075 PF08534 Redoxin HG564_RS05080 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HG564_RS05080 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HG564_RS05085 PF13649 Methyltransferase domain HG564_RS05090 PF18074 Primosomal protein N C-terminal domain HG564_RS05090 PF00270 DEAD/DEAH box helicase HG564_RS05090 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HG564_RS05090 PF17764 3′ DNA-binding domain (3′BD) HG564_RS05090 PF00271 Helicase conserved C-terminal domain HG564_RS05115 PF01435 Peptidase family M48 HG564_RS05120 PF17827 PrmC N-terminal domain HG564_RS05120 PF05175 Methyltransferase small domain HG564_RS05130 PF18025 Alpha-(1,3)-fucosyltransferase FucT N-terminal domain HG564_RS05130 PF00852 Glycosyltransferase family 10 (fucosyltransferase) C-term HG564_RS05135 PF01578 Cytochrome C assembly protein HG564_RS05135 PF05140 ResB-like family HG564_RS05145 PF00762 Ferrochelatase HG564_RS05155 PF04452 RNA methyltransferase HG564_RS05165 PF00692 dUTPase HG564_RS05170 PF00364 Biotin-requiring enzyme HG564_RS05175 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HG564_RS05175 PF02785 Biotin carboxylase C-terminal domain HG564_RS05175 PF00289 Biotin carboxylase, N-terminal domain HG564_RS05195 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HG564_RS05205 PF00268 Ribonucleotide reductase, small chain HG564_RS05220 PF01416 tRNA pseudouridine synthase HG564_RS05225 PF01370 NAD dependent epimerase/dehydratase family HG564_RS05245 PF00106 short chain dehydrogenase HG564_RS05250 PF08238 Sel1 repeat HG564_RS05255 PF01081 KDPG and KHG aldolase HG564_RS05260 PF00920 Dehydratase family HG564_RS05265 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain HG564_RS05265 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain HG564_RS05270 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HG564_RS05275 PF02685 Glucokinase HG564_RS05280 PF00107 Zinc-binding dehydrogenase HG564_RS05280 PF08240 Alcohol dehydrogenase GroES-like domain HG564_RS05305 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HG564_RS05315 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HG564_RS05315 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HG564_RS05320 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HG564_RS05325 PF00206 Lyase HG564_RS05325 PF10397 Adenylosuccinate lyase C-terminus HG564_RS05335 PF04851 Type III restriction enzyme, res subunit HG564_RS05335 PF00271 Helicase conserved C-terminal domain HG564_RS05335 PF12344 Ultra-violet resistance protein B HG564_RS05335 PF17757 UvrB interaction domain HG564_RS05335 PF02151 UvrB/uvrC motif HG564_RS05360 PF07559 Flagellar basal body protein FlaE HG564_RS05360 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HG564_RS05360 PF00460 Flagella basal body rod protein HG564_RS05370 PF00145 C-5 cytosine-specific DNA methylase HG564_RS05385 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HG564_RS05395 PF00691 OmpA family HG564_RS05400 PF07676 WD40-like Beta Propeller Repeat HG564_RS05410 PF02472 Biopolymer transport protein ExbD/TolR HG564_RS05415 PF01618 MotA/TolQ/ExbB proton channel family HG564_RS05420 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HG564_RS05425 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HG564_RS05425 PF02874 ATP synthase alpha/beta family, beta-barrel domain HG564_RS05430 PF00231 ATP synthase HG564_RS05435 PF02874 ATP synthase alpha/beta family, beta-barrel domain HG564_RS05435 PF00306 ATP synthase alpha/beta chain, C terminal domain HG564_RS05435 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HG564_RS05445 PF00430 ATP synthase B/B' CF(0) HG564_RS05455 PF17762 HTH domain found in ParB protein HG564_RS05455 PF02195 ParB-like nuclease domain HG564_RS05460 PF13614 AAA domain HG564_RS05465 PF08279 HTH domain HG564_RS05465 PF03099 Biotin/lipoate A/B protein ligase family HG564_RS05465 PF02237 Biotin protein ligase C terminal domain HG564_RS05470 PF00551 Formyl transferase HG564_RS05470 PF02911 Formyl transferase, C-terminal domain HG564_RS05495 PF01245 Ribosomal protein L19 HG564_RS05500 PF01746 tRNA (Guanine-1)-methyltransferase HG564_RS05505 PF01782 RimM N-terminal domain HG564_RS05505 PF05239 PRC-barrel domain HG564_RS05515 PF00886 Ribosomal protein S16 HG564_RS05520 PF02881 SRP54-type protein, helical bundle domain HG564_RS05520 PF00448 SRP54-type protein, GTPase domain HG564_RS05520 PF02978 Signal peptide binding domain HG564_RS05525 PF10458 Valyl tRNA synthetase tRNA binding arm HG564_RS05525 PF08264 Anticodon-binding domain of tRNA HG564_RS05525 PF00133 tRNA synthetases class I (I, L, M and V) HG564_RS05530 PF02623 FliW protein HG564_RS05535 PF04101 Glycosyltransferase family 28 C-terminal domain HG564_RS05535 PF03033 Glycosyltransferase family 28 N-terminal domain HG564_RS05550 PF03807 NADP oxidoreductase coenzyme F420-dependent HG564_RS05550 PF14748 Pyrroline-5-carboxylate reductase dimerisation HG564_RS05555 PF02661 Fic/DOC family HG564_RS05560 PF02130 Uncharacterized protein family UPF0054 HG564_RS05565 PF00258 Flavodoxin HG564_RS05580 PF07992 Pyridine nucleotide-disulphide oxidoreductase HG564_RS05590 PF00342 Phosphoglucose isomerase HG564_RS05600 PF02554 Carbon starvation protein CstA HG564_RS05600 PF13722 5TM C-terminal transporter carbon starvation CstA HG564_RS05605 PF00528 Binding-protein-dependent transport system inner membrane component HG564_RS05610 PF00528 Binding-protein-dependent transport system inner membrane component HG564_RS05615 PF00005 ABC transporter HG564_RS05630 PF07690 Major Facilitator Superfamily HG564_RS05635 PF00860 Permease family HG564_RS05645 PF01048 Phosphorylase superfamily HG564_RS05650 PF01676 Metalloenzyme superfamily HG564_RS05655 PF01773 Na+ dependent nucleoside transporter N-terminus HG564_RS05655 PF07662 Na+ dependent nucleoside transporter C-terminus HG564_RS05665 PF07690 Major Facilitator Superfamily HG564_RS05670 PF01171 PP-loop family HG564_RS05675 PF02254 TrkA-N domain HG564_RS05675 PF02080 TrkA-C domain HG564_RS05675 PF00999 Sodium/hydrogen exchanger family HG564_RS05680 PF01554 MatE HG564_RS05685 PF07690 Major Facilitator Superfamily HG564_RS05690 PF00194 Eukaryotic-type carbonic anhydrase HG564_RS05700 PF01118 Semialdehyde dehydrogenase, NAD binding domain HG564_RS05700 PF02774 Semialdehyde dehydrogenase, dimerisation domain HG564_RS05705 PF03129 Anticodon binding domain HG564_RS05705 PF13393 Histidyl-tRNA synthetase HG564_RS05710 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HG564_RS05720 PF03144 Elongation factor Tu domain 2 HG564_RS05720 PF03764 Elongation factor G, domain IV HG564_RS05720 PF00679 Elongation factor G C-terminus HG564_RS05720 PF14492 Elongation Factor G, domain II HG564_RS05720 PF00009 Elongation factor Tu GTP binding domain HG564_RS05725 PF00177 Ribosomal protein S7p/S5e HG564_RS05730 PF00164 Ribosomal protein S12/S23 HG564_RS05735 PF04565 RNA polymerase Rpb2, domain 3 HG564_RS05735 PF00623 RNA polymerase Rpb1, domain 2 HG564_RS05735 PF04998 RNA polymerase Rpb1, domain 5 HG564_RS05735 PF04563 RNA polymerase beta subunit HG564_RS05735 PF04561 RNA polymerase Rpb2, domain 2 HG564_RS05735 PF10385 RNA polymerase beta subunit external 1 domain HG564_RS05735 PF00562 RNA polymerase Rpb2, domain 6 HG564_RS05735 PF04560 RNA polymerase Rpb2, domain 7 HG564_RS05735 PF04997 RNA polymerase Rpb1, domain 1 HG564_RS05735 PF04983 RNA polymerase Rpb1, domain 3 HG564_RS05735 PF05000 RNA polymerase Rpb1, domain 4 HG564_RS05740 PF00542 Ribosomal protein L7/L12 C-terminal domain HG564_RS05740 PF16320 Ribosomal protein L7/L12 dimerisation domain HG564_RS05745 PF00466 Ribosomal protein L10 HG564_RS05750 PF00687 Ribosomal protein L1p/L10e family HG564_RS05755 PF00298 Ribosomal protein L11, RNA binding domain HG564_RS05755 PF03946 Ribosomal protein L11, N-terminal domain HG564_RS05760 PF02357 Transcription termination factor nusG HG564_RS05775 PF00471 Ribosomal protein L33 HG564_RS05780 PF03144 Elongation factor Tu domain 2 HG564_RS05780 PF00009 Elongation factor Tu GTP binding domain HG564_RS05780 PF03143 Elongation factor Tu C-terminal domain HG564_RS05805 PF00005 ABC transporter HG564_RS05805 PF00664 ABC transporter transmembrane region HG564_RS05815 PF02086 D12 class N6 adenine-specific DNA methyltransferase HG564_RS05820 PF05315 ICEA Protein HG564_RS05825 PF00132 Bacterial transferase hexapeptide (six repeats) HG564_RS05840 PF00137 ATP synthase subunit C HG564_RS05845 PF00575 S1 RNA binding domain HG564_RS05845 PF01138 3' exoribonuclease family, domain 1 HG564_RS05845 PF00013 KH domain HG564_RS05845 PF03725 3' exoribonuclease family, domain 2 HG564_RS05855 PF04453 LPS transport system D HG564_RS05855 PF03968 OstA-like protein HG564_RS05865 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HG564_RS05865 PF02843 Phosphoribosylglycinamide synthetase, C domain HG564_RS05865 PF02844 Phosphoribosylglycinamide synthetase, N domain HG564_RS05870 PF00005 ABC transporter HG564_RS05875 PF01255 Putative undecaprenyl diphosphate synthase HG564_RS05895 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HG564_RS05900 PF04055 Radical SAM superfamily HG564_RS05905 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HG564_RS05910 PF00293 NUDIX domain HG564_RS05915 PF01842 ACT domain HG564_RS05915 PF00696 Amino acid kinase family HG564_RS05915 PF13840 ACT domain HG564_RS05925 PF12169 DNA polymerase III subunits gamma and tau domain III HG564_RS05930 PF00809 Pterin binding enzyme HG564_RS05940 PF00892 EamA-like transporter family HG564_RS05955 PF00117 Glutamine amidotransferase class-I HG564_RS05955 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HG564_RS05960 PF00795 Carbon-nitrogen hydrolase HG564_RS05970 PF02545 Maf-like protein HG564_RS05975 PF01411 tRNA synthetases class II (A) HG564_RS05975 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HG564_RS05975 PF02272 DHHA1 domain HG564_RS05990 PF01084 Ribosomal protein S18 HG564_RS05995 PF00436 Single-strand binding protein family HG564_RS06000 PF01250 Ribosomal protein S6 HG564_RS06005 PF06144 DNA polymerase III, delta subunit HG564_RS06010 PF00773 RNB domain HG564_RS06015 PF08501 Shikimate dehydrogenase substrate binding domain HG564_RS06025 PF00528 Binding-protein-dependent transport system inner membrane component HG564_RS06030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HG564_RS06035 PF00579 tRNA synthetases class I (W and Y) HG564_RS06045 PF03840 Preprotein translocase SecG subunit HG564_RS06050 PF01765 Ribosome recycling factor HG564_RS06055 PF00156 Phosphoribosyl transferase domain HG564_RS06065 PF02146 Sir2 family HG564_RS06070 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HG564_RS06075 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HG564_RS06080 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HG564_RS06085 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HG564_RS06100 PF00384 Molybdopterin oxidoreductase HG564_RS06100 PF12838 4Fe-4S dicluster domain HG564_RS06100 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HG564_RS06100 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HG564_RS06100 PF01568 Molydopterin dinucleotide binding domain HG564_RS06105 PF00146 NADH dehydrogenase HG564_RS06110 PF12838 4Fe-4S dicluster domain HG564_RS06115 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HG564_RS06120 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HG564_RS06125 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HG564_RS06125 PF00361 Proton-conducting membrane transporter HG564_RS06130 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus HG564_RS06130 PF00361 Proton-conducting membrane transporter HG564_RS06135 PF00361 Proton-conducting membrane transporter HG564_RS06145 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HG564_RS06145 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HG564_RS06145 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HG564_RS06145 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HG564_RS06155 PF00290 Tryptophan synthase alpha chain HG564_RS06160 PF00291 Pyridoxal-phosphate dependent enzyme HG564_RS06165 PF00218 Indole-3-glycerol phosphate synthase HG564_RS06165 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HG564_RS06170 PF02885 Glycosyl transferase family, helical bundle domain HG564_RS06170 PF00591 Glycosyl transferase family, a/b domain HG564_RS06175 PF00117 Glutamine amidotransferase class-I HG564_RS06180 PF04715 Anthranilate synthase component I, N terminal region HG564_RS06180 PF00425 chorismate binding enzyme HG564_RS06185 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HG564_RS06195 PF04264 YceI-like domain HG564_RS06200 PF03070 TENA/THI-4/PQQC family HG564_RS06205 PF04973 Nicotinamide mononucleotide transporter HG564_RS06215 PF01196 Ribosomal protein L17 HG564_RS06220 PF01000 RNA polymerase Rpb3/RpoA insert domain HG564_RS06220 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HG564_RS06220 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HG564_RS06225 PF00163 Ribosomal protein S4/S9 N-terminal domain HG564_RS06225 PF01479 S4 domain HG564_RS06230 PF00411 Ribosomal protein S11 HG564_RS06235 PF00416 Ribosomal protein S13/S18 HG564_RS06240 PF00444 Ribosomal protein L36 HG564_RS06245 PF01176 Translation initiation factor 1A / IF-1 HG564_RS06250 PF00557 Metallopeptidase family M24 HG564_RS06255 PF00344 SecY translocase HG564_RS06260 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HG564_RS06265 PF03719 Ribosomal protein S5, C-terminal domain HG564_RS06265 PF00333 Ribosomal protein S5, N-terminal domain HG564_RS06270 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HG564_RS06275 PF00347 Ribosomal protein L6 HG564_RS06280 PF00410 Ribosomal protein S8 HG564_RS06285 PF00253 Ribosomal protein S14p/S29e HG564_RS06290 PF00673 ribosomal L5P family C-terminus HG564_RS06290 PF00281 Ribosomal protein L5 HG564_RS06295 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HG564_RS06295 PF00467 KOW motif HG564_RS06300 PF00238 Ribosomal protein L14p/L23e HG564_RS06305 PF00366 Ribosomal protein S17 HG564_RS06310 PF00831 Ribosomal L29 protein HG564_RS06315 PF00252 Ribosomal protein L16p/L10e HG564_RS06320 PF00189 Ribosomal protein S3, C-terminal domain HG564_RS06320 PF07650 KH domain HG564_RS06325 PF00237 Ribosomal protein L22p/L17e HG564_RS06330 PF00203 Ribosomal protein S19 HG564_RS06335 PF00181 Ribosomal Proteins L2, RNA binding domain HG564_RS06335 PF03947 Ribosomal Proteins L2, C-terminal domain HG564_RS06340 PF00276 Ribosomal protein L23 HG564_RS06345 PF00573 Ribosomal protein L4/L1 family HG564_RS06350 PF00297 Ribosomal protein L3 HG564_RS06355 PF00338 Ribosomal protein S10p/S20e HG564_RS06370 PF01351 Ribonuclease HII HG564_RS06380 PF10415 Fumarase C C-terminus HG564_RS06380 PF00206 Lyase HG564_RS06400 PF00873 AcrB/AcrD/AcrF family HG564_RS06405 PF05437 Branched-chain amino acid transport protein (AzlD) HG564_RS06410 PF03591 AzlC protein HG564_RS06415 PF01556 DnaJ C terminal domain HG564_RS06415 PF00684 DnaJ central domain HG564_RS06415 PF00226 DnaJ domain HG564_RS06435 PF01467 Cytidylyltransferase-like HG564_RS06440 PF08753 NikR C terminal nickel binding domain HG564_RS06440 PF01402 Ribbon-helix-helix protein, copG family HG564_RS06445 PF01618 MotA/TolQ/ExbB proton channel family HG564_RS06450 PF02472 Biopolymer transport protein ExbD/TolR HG564_RS06455 PF03544 Gram-negative bacterial TonB protein C-terminal HG564_RS06465 PF03741 Integral membrane protein TerC family HG564_RS06470 PF01544 CorA-like Mg2+ transporter protein HG564_RS06475 PF00162 Phosphoglycerate kinase HG564_RS06480 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HG564_RS06480 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HG564_RS06485 PF03167 Uracil DNA glycosylase superfamily HG564_RS06490 PF01553 Acyltransferase HG564_RS06500 PF13180 PDZ domain HG564_RS06500 PF03572 Peptidase family S41 HG564_RS06515 PF18755 Restriction Enzyme Adenine Methylase Associated HG564_RS06515 PF01555 DNA methylase HG564_RS06530 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HG564_RS06530 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HG564_RS06535 PF02445 Quinolinate synthetase A protein HG564_RS06540 PF02666 Phosphatidylserine decarboxylase HG564_RS06555 PF01040 UbiA prenyltransferase family HG564_RS06565 PF00772 DnaB-like helicase N terminal domain HG564_RS06565 PF03796 DnaB-like helicase C terminal domain HG564_RS06570 PF01256 Carbohydrate kinase HG564_RS06570 PF03853 YjeF-related protein N-terminus HG564_RS06575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HG564_RS06580 PF00072 Response regulator receiver domain HG564_RS06580 PF00486 Transcriptional regulatory protein, C terminal HG564_RS06590 PF09233 Restriction endonuclease EcoRV HG564_RS06595 PF02086 D12 class N6 adenine-specific DNA methyltransferase HG564_RS06600 PF01555 DNA methylase HG564_RS06605 PF01555 DNA methylase HG564_RS06625 PF10431 C-terminal, D2-small domain, of ClpB protein HG564_RS06625 PF07724 AAA domain (Cdc48 subfamily) HG564_RS06630 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HG564_RS06630 PF00132 Bacterial transferase hexapeptide (six repeats) HG564_RS06635 PF07977 FabA-like domain HG564_RS06640 PF02623 FliW protein HG564_RS06645 PF13525 Outer membrane lipoprotein HG564_RS06650 PF02190 ATP-dependent protease La (LON) substrate-binding domain HG564_RS06650 PF05362 Lon protease (S16) C-terminal proteolytic domain HG564_RS06650 PF00004 ATPase family associated with various cellular activities (AAA) HG564_RS06655 PF01842 ACT domain HG564_RS06655 PF02153 Prephenate dehydrogenase HG564_RS06670 PF04851 Type III restriction enzyme, res subunit HG564_RS06675 PF06968 Biotin and Thiamin Synthesis associated domain HG564_RS06675 PF04055 Radical SAM superfamily HG564_RS06680 PF03631 Virulence factor BrkB HG564_RS06715 PF01385 Probable transposase HG564_RS06715 PF07282 Putative transposase DNA-binding domain HG564_RS06715 PF12323 Helix-turn-helix domain HG564_RS06725 PF14489 QueF-like protein HG564_RS06755 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HG564_RS06760 PF01313 Bacterial export proteins, family 3 HG564_RS06765 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HG564_RS06765 PF18269 T3SS EscN ATPase C-terminal domain HG564_RS06770 PF00437 Type II/IV secretion system protein HG564_RS06775 PF08264 Anticodon-binding domain of tRNA HG564_RS06775 PF00133 tRNA synthetases class I (I, L, M and V) HG564_RS06780 PF01479 S4 domain HG564_RS06795 PF04055 Radical SAM superfamily HG564_RS06800 PF01380 SIS domain HG564_RS06800 PF00571 CBS domain HG564_RS06805 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HG564_RS06805 PF17770 Ribonuclease J C-terminal domain HG564_RS06805 PF00753 Metallo-beta-lactamase superfamily HG564_RS06810 PF00398 Ribosomal RNA adenine dimethylase HG564_RS06825 PF01420 Type I restriction modification DNA specificity domain HG564_RS06830 PF00551 Formyl transferase HG564_RS06830 PF01842 ACT domain HG564_RS06835 PF01343 Peptidase family S49 HG564_RS06875 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HG564_RS06880 PF02599 Global regulator protein family HG564_RS06885 PF00288 GHMP kinases N terminal domain HG564_RS06890 PF01668 SmpB protein HG564_RS06895 PF01618 MotA/TolQ/ExbB proton channel family HG564_RS06900 PF02472 Biopolymer transport protein ExbD/TolR HG564_RS06905 PF00468 Ribosomal protein L34 HG564_RS06910 PF00825 Ribonuclease P HG564_RS06915 PF01809 Putative membrane protein insertion efficiency factor HG564_RS06920 PF02096 60Kd inner membrane protein HG564_RS06920 PF14849 YidC periplasmic domain HG564_RS06930 PF01926 50S ribosome-binding GTPase HG564_RS06930 PF12631 MnmE helical domain HG564_RS06930 PF10396 GTP-binding protein TrmE N-terminus HG564_RS06955 PF02169 LPP20 lipoprotein HG564_RS06965 PF00085 Thioredoxin HG564_RS06970 PF01479 S4 domain HG564_RS06970 PF00849 RNA pseudouridylate synthase HG564_RS06975 PF07733 Bacterial DNA polymerase III alpha NTPase domain HG564_RS06975 PF14579 Helix-hairpin-helix motif HG564_RS06975 PF02811 PHP domain HG564_RS06975 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HG564_RS06980 PF00034 Cytochrome c HG564_RS06980 PF03150 Di-haem cytochrome c peroxidase HG564_RS07000 PF00005 ABC transporter HG564_RS07000 PF09383 NIL domain HG564_RS07005 PF02405 Permease MlaE HG564_RS07015 PF01063 Amino-transferase class IV HG564_RS07025 PF00476 DNA polymerase family A HG564_RS07025 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HG564_RS07025 PF01367 5'-3' exonuclease, C-terminal SAM fold HG564_RS07045 PF02223 Thymidylate kinase HG564_RS07050 PF01467 Cytidylyltransferase-like HG564_RS07055 PF02441 Flavoprotein HG564_RS07065 PF00580 UvrD/REP helicase N-terminal domain HG564_RS07065 PF13361 UvrD-like helicase C-terminal domain HG564_RS07075 PF02403 Seryl-tRNA synthetase N-terminal domain HG564_RS07075 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HG564_RS07085 PF02609 Exonuclease VII small subunit HG564_RS07090 PF01209 ubiE/COQ5 methyltransferase family HG564_RS07095 PF03653 Uncharacterised protein family (UPF0093) HG564_RS07100 PF09186 Domain of unknown function (DUF1949) HG564_RS07100 PF01205 Uncharacterized protein family UPF0029 HG564_RS07115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HG564_RS07125 PF01595 Cyclin M transmembrane N-terminal domain HG564_RS07125 PF03471 Transporter associated domain HG564_RS07125 PF00571 CBS domain HG564_RS07130 PF01384 Phosphate transporter family HG564_RS07135 PF01106 NifU-like domain HG564_RS07145 PF08245 Mur ligase middle domain HG564_RS07145 PF02875 Mur ligase family, glutamate ligase domain HG564_RS07150 PF00923 Transaldolase/Fructose-6-phosphate aldolase HG564_RS07155 PF14693 Ribosomal protein TL5, C-terminal domain HG564_RS07155 PF01386 Ribosomal L25p family HG564_RS07160 PF01195 Peptidyl-tRNA hydrolase HG564_RS07185 PF00403 Heavy-metal-associated domain HG564_RS07190 PF05175 Methyltransferase small domain HG564_RS07195 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HG564_RS07195 PF01872 RibD C-terminal domain HG564_RS07200 PF03616 Sodium/glutamate symporter HG564_RS07205 PF03435 Saccharopine dehydrogenase NADP binding domain HG564_RS07205 PF16653 Saccharopine dehydrogenase C-terminal domain HG564_RS07210 PF13746 4Fe-4S dicluster domain HG564_RS07210 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase HG564_RS07210 PF12801 4Fe-4S binding domain HG564_RS07215 PF02660 Glycerol-3-phosphate acyltransferase HG564_RS07235 PF03841 L-seryl-tRNA selenium transferase HG564_RS07240 PF13184 NusA-like KH domain HG564_RS07240 PF08529 NusA N-terminal domain HG564_RS07250 PF04851 Type III restriction enzyme, res subunit HG564_RS07250 PF08774 VRR-NUC domain HG564_RS07260 PF00271 Helicase conserved C-terminal domain HG564_RS07260 PF04851 Type III restriction enzyme, res subunit HG564_RS07275 PF03372 Endonuclease/Exonuclease/phosphatase family HG564_RS07290 PF08299 Bacterial dnaA protein helix-turn-helix HG564_RS07290 PF00308 Bacterial dnaA protein HG564_RS07300 PF10398 Protein of unknown function (DUF2443) HG564_RS07305 PF01380 SIS domain HG564_RS07310 PF02511 Thymidylate synthase complementing protein HG564_RS07315 PF01420 Type I restriction modification DNA specificity domain HG564_RS07330 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HG564_RS07330 PF11867 Domain of unknown function (DUF3387) HG564_RS07330 PF18766 SWI2/SNF2 ATPase HG564_RS07340 PF07715 TonB-dependent Receptor Plug Domain HG564_RS07340 PF07660 Secretin and TonB N terminus short domain HG564_RS07340 PF00593 TonB dependent receptor HG564_RS07345 PF00491 Arginase family HG564_RS07350 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HG564_RS07350 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HG564_RS07365 PF01513 ATP-NAD kinase HG564_RS07370 PF02463 RecF/RecN/SMC N terminal domain HG564_RS07375 PF05670 NFACT protein RNA binding domain HG564_RS07390 PF07282 Putative transposase DNA-binding domain HG564_RS07390 PF12323 Helix-turn-helix domain HG564_RS07390 PF01385 Probable transposase HG564_RS07405 PF00929 Exonuclease HG564_RS07405 PF14579 Helix-hairpin-helix motif HG564_RS07405 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HG564_RS07405 PF07733 Bacterial DNA polymerase III alpha NTPase domain HG564_RS07405 PF02811 PHP domain HG564_RS07410 PF00834 Ribulose-phosphate 3 epimerase family HG564_RS07415 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HG564_RS07440 PF00889 Elongation factor TS HG564_RS07445 PF00318 Ribosomal protein S2 HG564_RS07450 PF13361 UvrD-like helicase C-terminal domain HG564_RS07450 PF12705 PD-(D/E)XK nuclease superfamily HG564_RS07450 PF00580 UvrD/REP helicase N-terminal domain HG564_RS07455 PF06965 Na+/H+ antiporter 1 HG564_RS07460 PF02699 Preprotein translocase subunit HG564_RS07465 PF02355 Protein export membrane protein HG564_RS07470 PF02355 Protein export membrane protein HG564_RS07470 PF07549 SecD/SecF GG Motif HG564_RS07480 PF00133 tRNA synthetases class I (I, L, M and V) HG564_RS07480 PF09334 tRNA synthetases class I (M) HG564_RS07480 PF13603 Leucyl-tRNA synthetase, Domain 2 HG564_RS07490 PF08245 Mur ligase middle domain HG564_RS07490 PF02875 Mur ligase family, glutamate ligase domain HG564_RS07500 PF01551 Peptidase family M23 HG564_RS07500 PF04225 Opacity-associated protein A LysM-like domain HG564_RS07510 PF00270 DEAD/DEAH box helicase HG564_RS07510 PF00271 Helicase conserved C-terminal domain HG564_RS07510 PF03461 TRCF domain HG564_RS07510 PF17757 UvrB interaction domain HG564_RS07510 PF02559 CarD-like/TRCF domain HG564_RS07515 PF00355 Rieske [2Fe-2S] domain HG564_RS07515 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal HG564_RS07520 PF00033 Cytochrome b/b6/petB HG564_RS07520 PF00032 Cytochrome b(C-terminal)/b6/petD HG564_RS07535 PF00905 Penicillin binding protein transpeptidase domain HG564_RS07535 PF03717 Penicillin-binding Protein dimerisation domain HG564_RS07545 PF02049 Flagellar hook-basal body complex protein FliE HG564_RS07550 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HG564_RS07550 PF00460 Flagella basal body rod protein HG564_RS07555 PF00460 Flagella basal body rod protein HG564_RS07560 PF01098 Cell cycle protein HG564_RS07575 PF10417 C-terminal domain of 1-Cys peroxiredoxin HG564_RS07575 PF00578 AhpC/TSA family HG564_RS07580 PF03180 NLPA lipoprotein HG564_RS07585 PF03717 Penicillin-binding Protein dimerisation domain HG564_RS07585 PF00905 Penicillin binding protein transpeptidase domain HG564_RS07595 PF01926 50S ribosome-binding GTPase HG564_RS07615 PF03330 Lytic transglycolase HG564_RS07615 PF05036 Sporulation related domain HG564_RS07620 PF01476 LysM domain HG564_RS07620 PF01464 Transglycosylase SLT domain HG564_RS07625 PF01026 TatD related DNase HG564_RS07630 PF00677 Lumazine binding domain HG564_RS07640 PF00005 ABC transporter HG564_RS07640 PF09383 NIL domain HG564_RS07645 PF00528 Binding-protein-dependent transport system inner membrane component HG564_RS07655 PF01569 PAP2 superfamily HG564_RS07660 PF00953 Glycosyl transferase family 4 HG564_RS07665 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HG564_RS07670 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HG564_RS07675 PF00814 Glycoprotease family HG564_RS07680 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HG564_RS07680 PF00460 Flagella basal body rod protein HG564_RS07690 PF03981 Ubiquinol-cytochrome C chaperone HG564_RS07690 PF13099 Domain of unknown function (DUF3944)